Your job contains 1 sequence.
>041466
MDVETPTNSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGE
EWFQVVDNGCGISPNNFKVRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSL
KDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLP
KVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQ
EIYSPNNASYSVNKVEQLIEPEKSGPSSGAESCMFLEQLSPDGNGCIEILNEQQISKGNT
PKTVEVDTLHSDALEGLVHSSNENGKGNFTLKAHDDKSADRLSKFNCMKLIGPHNVPTEE
NCPSPSRVMAKNITEDGESDSRSRCIQSSLNKFVTVSKRKYESIARPLTEMPLLRNQSLH
CQMKKSNSDMDAVDTRSPVRRHLVDDIAKLNKIEPFKCNKADKVSKEIENILSSEGNTNE
KPREELVTQEKATPLLNVPSIVSSSNDLKKNSEDLSVAASHLQFSGSILDAPVPSSSLDI
CSTLQFSIQDLRKRRQQRLSIMQSSCHTSGSVKMRRCFAAATLELSQPENEERKARALAA
ATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLN
QQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFG
VEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNE
MQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKNIDENGAGC
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 041466
(824 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q69L72 - symbol:OSJNBa0016G10.12 "Os02g0592300 ... 1505 1.3e-180 2
TAIR|locus:2133274 - symbol:PMS1 "POSTMEIOTIC SEGREGATION... 1125 6.0e-146 2
UNIPROTKB|F1PNU2 - symbol:PMS2 "Uncharacterized protein" ... 491 1.1e-90 4
UNIPROTKB|P54278 - symbol:PMS2 "Mismatch repair endonucle... 497 1.1e-90 5
FB|FBgn0011660 - symbol:Pms2 "Pms2" species:7227 "Drosoph... 512 1.2e-90 5
UNIPROTKB|F1PNW0 - symbol:PMS2 "Uncharacterized protein" ... 491 1.3e-90 4
ZFIN|ZDB-GENE-030131-686 - symbol:pms2 "PMS2 postmeiotic ... 484 1.4e-88 4
UNIPROTKB|F1RFM9 - symbol:PMS2 "Uncharacterized protein" ... 500 1.1e-83 3
POMBASE|SPAC19G12.02c - symbol:pms1 "MutL family mismatch... 456 1.2e-83 4
UNIPROTKB|D3ZZF0 - symbol:Pms2 "Protein Pms2" species:101... 504 5.9e-82 5
UNIPROTKB|F1NQJ2 - symbol:Gga.22468 "Uncharacterized prot... 494 1.7e-81 4
MGI|MGI:104288 - symbol:Pms2 "postmeiotic segregation inc... 498 8.9e-81 5
UNIPROTKB|Q755U7 - symbol:AER421W "AER421Wp" species:2848... 453 3.2e-77 5
UNIPROTKB|I3L0B5 - symbol:PMS2 "Mismatch repair endonucle... 497 4.2e-76 5
SGD|S000005026 - symbol:PMS1 "ATP-binding protein involve... 435 1.7e-74 5
UNIPROTKB|C9J167 - symbol:PMS2 "Mismatch repair endonucle... 497 2.1e-72 4
DICTYBASE|DDB_G0283981 - symbol:pms1 "MutL DNA mismatch r... 460 4.0e-71 3
UNIPROTKB|F1NQJ3 - symbol:Gga.22468 "Uncharacterized prot... 408 6.0e-71 3
ASPGD|ASPL0000093218 - symbol:AN11853 species:162425 "Eme... 409 6.4e-71 4
ASPGD|ASPL0000095187 - symbol:AN11854 species:162425 "Eme... 409 6.4e-71 4
UNIPROTKB|Q5AZG4 - symbol:AN6316.2 "ATP-binding protein (... 409 6.4e-71 4
WB|WBGene00004064 - symbol:pms-2 species:6239 "Caenorhabd... 390 1.3e-65 4
UNIPROTKB|G5EFG5 - symbol:pms-2 "Protein PMS-2, isoform a... 390 1.3e-65 4
RGD|1305483 - symbol:Pms2 "PMS2 postmeiotic segregation i... 504 9.0e-60 3
UNIPROTKB|Q22B61 - symbol:TTHERM_01109940 "DNA mismatch r... 369 2.0e-59 3
UNIPROTKB|Q7SAM1 - symbol:NCU08020 "Putative uncharacteri... 415 1.6e-58 5
GENEDB_PFALCIPARUM|MAL7P1.145 - symbol:MAL7P1.145 "mismat... 267 2.3e-55 6
UNIPROTKB|Q8IBJ3 - symbol:MAL7P1.145 "Mismatch repair pro... 267 2.3e-55 6
UNIPROTKB|Q7RPM0 - symbol:PY01438 "DNA mismatch repair pr... 252 1.1e-50 6
UNIPROTKB|A8IT98 - symbol:CHLREDRAFT_101121 "Predicted pr... 374 1.5e-33 1
UNIPROTKB|E1BA65 - symbol:PMS2 "Uncharacterized protein" ... 222 2.5e-32 2
UNIPROTKB|Q8TTB5 - symbol:mutL "DNA mismatch repair prote... 160 5.7e-28 3
UNIPROTKB|Q74BP0 - symbol:mutL "DNA mismatch repair prote... 192 1.2e-27 3
TIGR_CMR|GSU_2001 - symbol:GSU_2001 "DNA mismatch repair ... 192 1.2e-27 3
TIGR_CMR|DET_1195 - symbol:DET_1195 "DNA mismatch repair ... 154 4.5e-27 3
UNIPROTKB|F1P0J4 - symbol:PMS1 "Uncharacterized protein" ... 195 1.8e-24 3
UNIPROTKB|E2RAQ2 - symbol:PMS1 "Uncharacterized protein" ... 168 3.1e-24 4
ZFIN|ZDB-GENE-030616-528 - symbol:pms1 "PMS1 postmeiotic ... 195 3.3e-24 3
UNIPROTKB|F1MW63 - symbol:PMS1 "Uncharacterized protein" ... 174 4.6e-24 4
UNIPROTKB|P54277 - symbol:PMS1 "PMS1 protein homolog 1" s... 165 7.8e-23 3
TIGR_CMR|NSE_0609 - symbol:NSE_0609 "DNA mismatch repair ... 153 2.1e-22 4
UNIPROTKB|A9WJ86 - symbol:mutL "DNA mismatch repair prote... 167 3.9e-22 3
UNIPROTKB|F1SN54 - symbol:PMS1 "Uncharacterized protein" ... 151 9.5e-22 3
TIGR_CMR|CHY_1396 - symbol:CHY_1396 "DNA mismatch repair ... 125 1.3e-21 4
UNIPROTKB|Q8F6X4 - symbol:mutL "DNA mismatch repair prote... 142 1.6e-21 3
TIGR_CMR|ECH_0884 - symbol:ECH_0884 "DNA mismatch repair ... 134 3.8e-21 3
RGD|1359511 - symbol:Pms1 "postmeiotic segregation increa... 157 3.2e-20 4
TIGR_CMR|SPO_3362 - symbol:SPO_3362 "DNA mismatch repair ... 165 3.6e-20 3
UNIPROTKB|D4A651 - symbol:D4A651 "Uncharacterized protein... 157 6.2e-20 4
UNIPROTKB|Q9RTR0 - symbol:mutL "DNA mismatch repair prote... 120 1.5e-18 4
UNIPROTKB|Q48P04 - symbol:mutL "DNA mismatch repair prote... 128 2.6e-18 3
TIGR_CMR|APH_0939 - symbol:APH_0939 "DNA mismatch repair ... 129 3.8e-18 3
TIGR_CMR|BA_3904 - symbol:BA_3904 "DNA mismatch repair pr... 141 7.8e-18 3
UNIPROTKB|G3N1K7 - symbol:PMS2 "Uncharacterized protein" ... 222 3.3e-17 1
UNIPROTKB|Q13401 - symbol:PMS2P3 "Putative postmeiotic se... 219 7.0e-17 1
UNIPROTKB|P49850 - symbol:mutL "DNA mismatch repair prote... 121 1.1e-16 3
UNIPROTKB|Q89DE6 - symbol:mutL "DNA mismatch repair prote... 124 3.7e-16 3
UNIPROTKB|Q5JN46 - symbol:P0401G10.10 "Os01g0958900 prote... 174 5.2e-16 2
POMBASE|SPBC1703.04 - symbol:mlh1 "MutL family protein Ml... 176 6.9e-16 2
UNIPROTKB|Q3BDU3 - symbol:PMS1 "Rhabdomyosarcoma antigen ... 147 8.4e-16 2
UNIPROTKB|O67518 - symbol:mutL "DNA mismatch repair prote... 128 9.1e-16 4
UNIPROTKB|Q13670 - symbol:PMS2P11 "Putative postmeiotic s... 208 1.1e-15 1
UNIPROTKB|F1MPG0 - symbol:MLH1 "Uncharacterized protein" ... 154 1.2e-15 2
UNIPROTKB|Q7SA79 - symbol:NCU08309 "Putative uncharacteri... 167 1.6e-15 3
UNIPROTKB|A6VD59 - symbol:mutL "DNA mismatch repair prote... 123 1.9e-15 3
UNIPROTKB|E1BQE0 - symbol:MLH1 "Uncharacterized protein" ... 165 8.9e-15 2
CGD|CAL0003904 - symbol:orf19.7257 species:5476 "Candida ... 174 9.2e-15 3
ZFIN|ZDB-GENE-040426-1600 - symbol:mlh1 "mutL homolog 1, ... 143 9.8e-15 2
UNIPROTKB|Q755L3 - symbol:AFL199C "AFL199Cp" species:2848... 157 1.3e-14 3
SGD|S000004777 - symbol:MLH1 "Protein required for mismat... 143 1.8e-14 2
UNIPROTKB|E2RBM6 - symbol:MLH1 "Uncharacterized protein" ... 152 3.3e-14 2
MGI|MGI:101938 - symbol:Mlh1 "mutL homolog 1 (E. coli)" s... 149 4.4e-14 2
UNIPROTKB|Q3KLC2 - symbol:mutL "DNA mismatch repair prote... 136 6.0e-14 2
TAIR|locus:2122388 - symbol:MLH1 "AT4G09140" species:3702... 155 7.4e-14 3
UNIPROTKB|B7ZAA0 - symbol:PMS1 "cDNA, FLJ79114, highly si... 165 1.2e-13 2
UNIPROTKB|Q7NL47 - symbol:mutL "DNA mismatch repair prote... 130 1.2e-13 3
UNIPROTKB|A8HM54 - symbol:MLH1 "Mismatch repair protein" ... 164 1.3e-13 2
UNIPROTKB|E9PC65 - symbol:PMS1 "PMS1 protein homolog 1" s... 165 1.3e-13 2
UNIPROTKB|P40692 - symbol:MLH1 "DNA mismatch repair prote... 151 1.4e-13 3
RGD|620937 - symbol:Mlh1 "mutL homolog 1, colon cancer, n... 142 1.5e-13 2
UNIPROTKB|P97679 - symbol:Mlh1 "DNA mismatch repair prote... 142 1.5e-13 2
UNIPROTKB|A4D2B8 - symbol:PMS2P1 "Putative postmeiotic se... 210 1.6e-13 2
UNIPROTKB|H0Y818 - symbol:MLH1 "DNA mismatch repair prote... 144 5.1e-13 3
UNIPROTKB|Q5B515 - symbol:AN4365.2 "DNA mismatch repair p... 164 6.0e-13 2
DICTYBASE|DDB_G0283883 - symbol:mlh3 "MutL DNA mismatch r... 159 1.0e-12 3
UNIPROTKB|O95744 - symbol:PMS2P2 "Putative postmeiotic se... 194 1.1e-12 1
CGD|CAL0005779 - symbol:MLH1 species:5476 "Candida albica... 158 1.2e-12 2
ASPGD|ASPL0000056766 - symbol:AN0126 species:162425 "Emer... 165 9.1e-12 3
UNIPROTKB|Q5BH54 - symbol:AN0126.2 "DNA mismatch repair p... 165 9.1e-12 3
ZFIN|ZDB-GENE-060810-45 - symbol:mlh3 "mutL homolog 3 (E.... 133 1.9e-11 4
UNIPROTKB|Q8A120 - symbol:mutL "DNA mismatch repair prote... 127 2.2e-11 3
UNIPROTKB|E1C7F3 - symbol:LOC100859200 "Uncharacterized p... 144 3.1e-11 4
TIGR_CMR|VC_0345 - symbol:VC_0345 "DNA mismatch repair pr... 143 3.9e-11 4
SGD|S000006085 - symbol:MLH3 "Protein involved in mismatc... 124 4.4e-11 3
TIGR_CMR|CBU_1083 - symbol:CBU_1083 "DNA mismatch repair ... 125 7.4e-11 3
WB|WBGene00003373 - symbol:mlh-1 species:6239 "Caenorhabd... 144 2.4e-10 2
UNIPROTKB|Q9XU10 - symbol:mlh-1 "Protein MLH-1" species:6... 144 2.4e-10 2
UNIPROTKB|Q5FBZ6 - symbol:PMS1 "PMS1 protein homolog 1" s... 147 6.6e-10 2
TIGR_CMR|SO_0601 - symbol:SO_0601 "DNA mismatch repair pr... 129 1.0e-09 3
UNIPROTKB|P74925 - symbol:mutL "DNA mismatch repair prote... 120 1.2e-09 4
WARNING: Descriptions of 28 database sequences were not reported due to the
limiting value of parameter V = 100.
>UNIPROTKB|Q69L72 [details] [associations]
symbol:OSJNBa0016G10.12 "Os02g0592300 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032407 "MutSalpha complex
binding" evidence=IBA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0009555
GO:GO:0016887 GO:GO:0048316 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 EMBL:AP008208 EMBL:CM000139
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407
eggNOG:COG0323 GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9 KO:K10858 OMA:LDKPWNC
EMBL:AP005874 RefSeq:NP_001047292.1 UniGene:Os.23276 STRING:Q69L72
EnsemblPlants:LOC_Os02g37920.1 GeneID:4329835 KEGG:osa:4329835
ProtClustDB:CLSN2689293 Uniprot:Q69L72
Length = 923
Score = 1505 (534.8 bits), Expect = 1.3e-180, Sum P(2) = 1.3e-180
Identities = 341/760 (44%), Positives = 462/760 (60%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
+ + L AYALIAKGVR VCTNT GKN KS VL+TQGSSSLKDNIITVFG+N + CL+P
Sbjct: 177 KVISLLNAYALIAKGVRLVCTNTVGKNSKSAVLRTQGSSSLKDNIITVFGLNTFKCLQPF 236
Query: 140 AICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQYP 199
+ S+ C+V+GFLSKPG GSGRN GDRQ+F+VN RPVD+PKVSKLVNELY+ +N++QYP
Sbjct: 237 NVTISEGCQVDGFLSKPGPGSGRNSGDRQFFYVNGRPVDMPKVSKLVNELYRSSNAKQYP 296
Query: 200 IAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASYSVNKVEQLI 259
+A++NF +PT + DVNV PDKRK+FFS E +IL +LREG++ +Y P S+S+N VE
Sbjct: 297 VAVLNFCIPTTSYDVNVAPDKRKIFFSSEHAILLSLREGIENLYCPQQCSFSINSVE--- 353
Query: 260 EPEKS-GPS-SGAESCMFL---EQLSPDGNGCIEILNEQQISKGNTPKTVEVDTLHSDAL 314
+P K P+ G++ M L E +S N + ++E TP+ +V + + +
Sbjct: 354 DPGKEMDPAIDGSDEDMCLTEKENVSAPEND--DDMDETDSDDEVTPENQKVPSSVTTRV 411
Query: 315 EGLVHSSNENGKGNFTLKAHDDKSADRLSKFNCMKLIGPHNVPTE-ENCPSPSRVMAKNI 373
++ K L DR + + + PT ++ P+ + + +
Sbjct: 412 -----ATGSTPKDVSPLSRGPPAQLDRSTLLSAYRYEQREKTPTRVKSYPAQANHVRTGL 466
Query: 374 TEDGESDSRSRCIQSSLNKFVTVSKRKYESIARPLTEMPLLRNQSLHCQMKKS----NS- 428
S S +Q S+ KF++ +KRK+E ++E P+LR + Q++++ NS
Sbjct: 467 AA---KSSPSSAVQPSIMKFLSQNKRKHEDSCNLISEAPVLRRGTCLEQVRRTDLGVNSP 523
Query: 429 -----------DMDAVDTRSPVRRHLVDD-IAKLNKIEPFKCNKADKVSK--EIENILSS 474
+++A +P+R H + + ++ + P + VS E+ +
Sbjct: 524 TALTSRVSNIPEVNAPQGTNPLRHHSLQSFVPEMPEDSPQHSEPPNIVSHRDEVPQLRPC 583
Query: 475 EGNTNEKPREELVTQEKATPLLNVPSIVSSSNDLKKNSEDLSVAASHLQFSGSILDAPVP 534
+ + E + + PS S K + ++S+ +H + G A
Sbjct: 584 DVHATESEVDN--QHDPCHSKFGAPSRCSEVEPQNKLT-NISLPDAH--YDGHDTAAHSG 638
Query: 535 SSSLDICSTLQFSIQDLRKRRQQRLSIMQSSCHTSGSVKMRRCFAAATLELSQPXXXXXX 594
SS + +QF++ DLR+RR+ I + S K RC+ AATL+ P
Sbjct: 639 QSSYPV---MQFTLADLRRRRRHSFMISHAK-KGSFPEKSTRCYKAATLDNYVPDNEEGK 694
Query: 595 XXXXXXXXXXXXXXFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLS 654
F K+DFG M+V+GQFNLGFIIGKLDQDLFIVDQHAADEKYNFE LS
Sbjct: 695 SNSLAAATSELDKLFSKDDFGEMEVVGQFNLGFIIGKLDQDLFIVDQHAADEKYNFENLS 754
Query: 655 QSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFS 714
QST LN QPLL+PL+LDL+PEEEV+ SM+M IRKNGF L ED HA R+ +KAVPFS
Sbjct: 755 QSTTLNIQPLLQPLRLDLSPEEEVIVSMNMSTIRKNGFVLAEDLHASPCNRYFIKAVPFS 814
Query: 715 KKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGD 774
K ITFG +DVK+LIS LAD+QG+CSIISSYK+D DS+CPSRVRAMLASRACR S MIGD
Sbjct: 815 KNITFGAQDVKELISMLADSQGDCSIISSYKLDRTDSICPSRVRAMLASRACRMSTMIGD 874
Query: 775 ALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIR 814
L + EM+KIL++L L SPWNCPHGRPTMRHL DL I+
Sbjct: 875 PLTKTEMKKILKNLTGLRSPWNCPHGRPTMRHLADLHAIK 914
Score = 270 (100.1 bits), Expect = 1.3e-180, Sum P(2) = 1.3e-180
Identities = 52/75 (69%), Positives = 61/75 (81%)
Query: 8 NSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVD 67
+SP IRPI K VHRIC+GQVI DLSSAVKELVENSLDAGAT++E+ L+ YGE+ F V D
Sbjct: 5 SSPAIRPIGKSAVHRICSGQVIFDLSSAVKELVENSLDAGATTVEVTLRSYGEDSFTVAD 64
Query: 68 NGCGISPNNFKVRAV 82
NG GISP NF+ A+
Sbjct: 65 NGTGISPTNFQALAL 79
>TAIR|locus:2133274 [details] [associations]
symbol:PMS1 "POSTMEIOTIC SEGREGATION 1" species:3702
"Arabidopsis thaliana" [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IC] [GO:0006200 "ATP catabolic
process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=ISS;IMP] [GO:0007131 "reciprocal meiotic recombination"
evidence=RCA;IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0030983 "mismatched DNA binding" evidence=IEA;IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0006310 "DNA recombination"
evidence=IMP] [GO:0009555 "pollen development" evidence=RCA;IMP]
[GO:0010154 "fruit development" evidence=IMP] [GO:0048316 "seed
development" evidence=IMP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0000724 "double-strand break repair via
homologous recombination" evidence=RCA] [GO:0006261 "DNA-dependent
DNA replication" evidence=RCA] [GO:0006275 "regulation of DNA
replication" evidence=RCA] [GO:0006306 "DNA methylation"
evidence=RCA] [GO:0006312 "mitotic recombination" evidence=RCA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007129 "synapsis" evidence=RCA] [GO:0007140 "male meiosis"
evidence=RCA] [GO:0007267 "cell-cell signaling" evidence=RCA]
[GO:0009560 "embryo sac egg cell differentiation" evidence=RCA]
[GO:0009616 "virus induced gene silencing" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009691
"cytokinin biosynthetic process" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0009845
"seed germination" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010050 "vegetative phase change"
evidence=RCA] [GO:0010072 "primary shoot apical meristem
specification" evidence=RCA] [GO:0010162 "seed dormancy process"
evidence=RCA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0010267 "production of
ta-siRNAs involved in RNA interference" evidence=RCA] [GO:0010431
"seed maturation" evidence=RCA] [GO:0010564 "regulation of cell
cycle process" evidence=RCA] [GO:0016444 "somatic cell DNA
recombination" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0016568 "chromatin modification" evidence=RCA]
[GO:0019915 "lipid storage" evidence=RCA] [GO:0031047 "gene
silencing by RNA" evidence=RCA] [GO:0035196 "production of miRNAs
involved in gene silencing by miRNA" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045595
"regulation of cell differentiation" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
[GO:0048366 "leaf development" evidence=RCA] [GO:0048825 "cotyledon
development" evidence=RCA] [GO:0050826 "response to freezing"
evidence=RCA] [GO:0051301 "cell division" evidence=RCA] [GO:0051726
"regulation of cell cycle" evidence=RCA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
EMBL:CP002687 GO:GO:0009555 GO:GO:0016887 GO:GO:0048316
GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032389 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9
HSSP:P54278 KO:K10858 HOGENOM:HOG000165474 OMA:LDKPWNC
ProtClustDB:CLSN2689293 EMBL:AY047228 IPI:IPI00544288
RefSeq:NP_567236.1 UniGene:At.26416 ProteinModelPortal:Q941I6
SMR:Q941I6 STRING:Q941I6 PRIDE:Q941I6 EnsemblPlants:AT4G02460.1
GeneID:827997 KEGG:ath:AT4G02460 TAIR:At4g02460 InParanoid:Q941I6
PhylomeDB:Q941I6 Genevestigator:Q941I6 Uniprot:Q941I6
Length = 923
Score = 1125 (401.1 bits), Expect = 6.0e-146, Sum P(2) = 6.0e-146
Identities = 245/471 (52%), Positives = 320/471 (67%)
Query: 354 HNVPTEENCPSPSRVMAKNITE---DGESD--SRSRCIQSSLNKFVTVSKRKYESIARPL 408
H+V + PS + N+TE D D SRS QS+LN FVT+ KRK+E+I+ L
Sbjct: 440 HDVTHLDKTPSKG-LPQLNVTEKVTDASKDLSSRSSFAQSTLNTFVTMGKRKHENISTIL 498
Query: 409 TEMPLLRNQSLHCQMKKSNSDMDAVDTRSPVRRHLVDDIAKLNKIEPFKCNKADKVSKEI 468
+E P+LRNQ+ +++KS ++ A+ +R V +DD+ ++K E ++ D E+
Sbjct: 499 SETPVLRNQTSSYRVEKSKFEVRALASRCLVEGDQLDDMV-ISK-EDMTPSERDS---EL 553
Query: 469 ENILSSEGNTNEKPREELVTQEKATPL-LNVPSIVSS--SNDLKKNSEDLSVAASHLQFS 525
N +S + R E +E P+ P+ ++ D+++ SED + L+
Sbjct: 554 GNRISPGTQADNVERHE---REHEKPIRFEEPTSDNTLTKGDVERVSEDNPRCSQPLRSV 610
Query: 526 GSILDAPVPSSSLDICSTLQFSIQDLRKRRQQRLSIMQSSCHTS---GSVKMRRCFAAAT 582
++LD+P S+ + STL+FS Q+LR RR +RLS +QS+ + S + + ++CFAAAT
Sbjct: 611 ATVLDSPAQSTGPKMFSTLEFSFQNLRTRRLERLSRLQSTGYVSKCMNTPQPKKCFAAAT 670
Query: 583 LELSQPXXXXXXXXXXXXXXXXXXXXFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQH 642
LELSQP FRKEDF RM+V+GQFNLGFII KL++DLFIVDQH
Sbjct: 671 LELSQPDDEERKARALAAATSELERLFRKEDFRRMQVLGQFNLGFIIAKLERDLFIVDQH 730
Query: 643 AADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALA 702
AADEK+NFE L++STVLNQQPLL+PL L+L+PEEEV MHMDIIR+NGF LEE+P A
Sbjct: 731 AADEKFNFEHLARSTVLNQQPLLQPLNLELSPEEEVTVLMHMDIIRENGFLLEENPSAPP 790
Query: 703 GLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLA 762
G FRL+A+P+SK ITFGVED+KDLISTL DN GECS+ SSYK DS+CPSRVRAMLA
Sbjct: 791 GKHFRLRAIPYSKNITFGVEDLKDLISTLGDNHGECSVASSYKTSKTDSICPSRVRAMLA 850
Query: 763 SRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTI 813
SRACRSS+MIGD L +NEMQKI+EHLADL SPWNCPHGRPTMRHLVDLTT+
Sbjct: 851 SRACRSSVMIGDPLRKNEMQKIVEHLADLESPWNCPHGRPTMRHLVDLTTL 901
Score = 817 (292.7 bits), Expect = 2.1e-113, Sum P(2) = 2.1e-113
Identities = 201/447 (44%), Positives = 278/447 (62%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
+ V L AYALIAKGVRFVC+NTTGKN KSVVL TQG SLKDNIITVFG++ + L+PV
Sbjct: 185 KLVSLLNAYALIAKGVRFVCSNTTGKNPKSVVLNTQGRGSLKDNIITVFGISTFTSLQPV 244
Query: 140 AICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQYP 199
+IC S+ C+VEGFLSKPGQG+GRNL DRQYFF+N RPVD+PKVSKLVNELYK +SR+YP
Sbjct: 245 SICVSEDCRVEGFLSKPGQGTGRNLADRQYFFINGRPVDMPKVSKLVNELYKDTSSRKYP 304
Query: 200 IAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASYSVNKVEQLI 259
+ I++FIVP ACD+NVTPDKRKVFFSDE S++ +LREGL EIYS +NASY VN+ E+
Sbjct: 305 VTILDFIVPGGACDLNVTPDKRKVFFSDETSVIGSLREGLNEIYSSSNASYIVNRFEENS 364
Query: 260 E-PEKSGPSS-GAESCMFLEQLSPDGNGCIEILNEQQISKGNTPKTVEVDTLHSDALEGL 317
E P+K+G SS +S + E + D + + + I K N P EV+ +S +E
Sbjct: 365 EQPDKAGVSSFQKKSNLLSEGIVLDVSSKTRL--GEAIEKEN-PSLREVEIDNSSPMEKF 421
Query: 318 VHSSNENG--KGNFTLKAHDDKSADRLSKFNCMKLIGPHNVPTEENCPSPSRVMAKNITE 375
G KG +L HD D+ +L NV TE+ + +K+++
Sbjct: 422 KFEIKACGTKKGEGSLSVHDVTHLDKTPSKGLPQL----NV-TEKVTDA-----SKDLS- 470
Query: 376 DGESDSRSRCIQSSLNKFVTVSKRKYESIARPLTEMPLLRNQSLHCQMKKSNSDMDAVDT 435
SRS QS+LN FVT+ KRK+E+I+ L+E P+LRNQ+ +++KS ++ A+ +
Sbjct: 471 -----SRSSFAQSTLNTFVTMGKRKHENISTILSETPVLRNQTSSYRVEKSKFEVRALAS 525
Query: 436 RSPVRRHLVDDIAKLNKIEPFKCNKADKVSKEIENILSSEG-NTNEKPREELVTQEKATP 494
R V +DD+ ++K + + ++ I ++ +E+ E+ + E+ T
Sbjct: 526 RCLVEGDQLDDMV-ISKEDMTPSERDSELGNRISPGTQADNVERHEREHEKPIRFEEPTS 584
Query: 495 --LLNVPSIVSSSNDLKKNSEDL-SVA 518
L + S D + S+ L SVA
Sbjct: 585 DNTLTKGDVERVSEDNPRCSQPLRSVA 611
Score = 322 (118.4 bits), Expect = 6.0e-146, Sum P(2) = 6.0e-146
Identities = 61/78 (78%), Positives = 71/78 (91%)
Query: 5 TPTNSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQ 64
T T+SP IRPIN+ V+HRIC+GQVI DLSSAVKELVENSLDAGATSIEI L++YGE++FQ
Sbjct: 10 TTTSSPLIRPINRNVIHRICSGQVILDLSSAVKELVENSLDAGATSIEINLRDYGEDYFQ 69
Query: 65 VVDNGCGISPNNFKVRAV 82
V+DNGCGISP NFKV A+
Sbjct: 70 VIDNGCGISPTNFKVLAL 87
>UNIPROTKB|F1PNU2 [details] [associations]
symbol:PMS2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585 OMA:TINECED
GeneTree:ENSGT00530000063289 EMBL:AAEX03004285
Ensembl:ENSCAFT00000024721 Uniprot:F1PNU2
Length = 897
Score = 491 (177.9 bits), Expect = 1.1e-90, Sum P(4) = 1.1e-90
Identities = 103/207 (49%), Positives = 133/207 (64%)
Query: 611 KEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKL 670
K F M++IGQFNLGFII KL D+FIVDQHA DEKYNFE L Q TVL Q L+ P L
Sbjct: 705 KTMFAEMEIIGQFNLGFIITKLKADIFIVDQHATDEKYNFEMLQQHTVLQGQRLIAPQTL 764
Query: 671 DLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIST 730
+LT E + +++I RKNGF D A R +L ++P SK TFG +D+ +LI
Sbjct: 765 NLTAVNEAILIENLEIFRKNGFDFVIDEGAPVTERAKLISLPTSKNWTFGPQDIDELIFM 824
Query: 731 LADNQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLA 789
L+D+ G +C PSRVR M ASRACR S+MIG AL +EM+K++ H+
Sbjct: 825 LSDSPGV--------------MCRPSRVRQMFASRACRKSVMIGTALNTSEMKKLITHMG 870
Query: 790 DLNSPWNCPHGRPTMRHLVDLTTIRKN 816
+++ PWNCPHGRPTMRH+ +L I +N
Sbjct: 871 EMDHPWNCPHGRPTMRHIANLDVISQN 897
Score = 225 (84.3 bits), Expect = 1.1e-90, Sum P(4) = 1.1e-90
Identities = 45/114 (39%), Positives = 69/114 (60%)
Query: 149 VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQYPIAIMNFIVP 208
+ GF+S G GR+ DRQ+FF+N RP D KVS+LVNE+Y N QYP ++N V
Sbjct: 300 ISGFISHCAHGVGRSSTDRQFFFINRRPCDPAKVSRLVNEVYHMYNRHQYPFIVLNISVD 359
Query: 209 TRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASYSVNKVEQLIEPE 262
+ D+NVTPDKR++ +E +L L+ L ++ N +V++ + L++ E
Sbjct: 360 SECIDINVTPDKRQILLQEEKLLLAVLKTSLIAMFDSNVNKLTVSQ-QPLLDIE 412
Score = 223 (83.6 bits), Expect = 1.1e-90, Sum P(4) = 1.1e-90
Identities = 41/77 (53%), Positives = 60/77 (77%)
Query: 2 DVETPTNSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEE 61
DV + + I+PI++ VH+IC+GQV+ LS+AVKELVENS+DAGAT+I++ LK+YG +
Sbjct: 36 DVFSTELAKAIKPIDRKSVHQICSGQVVLSLSTAVKELVENSVDAGATNIDLKLKDYGVD 95
Query: 62 WFQVVDNGCGISPNNFK 78
+ +V DNGCG+ NF+
Sbjct: 96 FIEVSDNGCGVKEENFE 112
Score = 120 (47.3 bits), Expect = 1.1e-90, Sum P(4) = 1.1e-90
Identities = 29/74 (39%), Positives = 44/74 (59%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP- 138
+ V + AY +I+ G+R C+N G+ + +V+ T GSSS+K+NI +VFG L P
Sbjct: 214 KMVQVLHAYCIISVGIRISCSNQVGQGRRQLVVCTSGSSSVKENIGSVFGQKQLQSLIPF 273
Query: 139 VAICKSDS-CKVEG 151
V + SDS C+ G
Sbjct: 274 VQLPPSDSVCEEYG 287
Score = 42 (19.8 bits), Expect = 2.6e-13, Sum P(3) = 2.6e-13
Identities = 11/36 (30%), Positives = 19/36 (52%)
Query: 718 TFGVEDVKDLISTLADNQGECSIISSYKMDTADSVC 753
T G VK+ I ++ + S+I ++ +DSVC
Sbjct: 248 TSGSSSVKENIGSVFGQKQLQSLIPFVQLPPSDSVC 283
Score = 41 (19.5 bits), Expect = 9.7e-63, Sum P(3) = 9.7e-63
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 564 SSCHTSGSVKMRRCF 578
S+CHTS V R F
Sbjct: 154 STCHTSAKVGTRLAF 168
Score = 40 (19.1 bits), Expect = 2.1e-43, Sum P(3) = 2.1e-43
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 18 GVVHRICAGQVIKDLSSAVKELVENSLDAG 47
G +H C + + D +S + V LD G
Sbjct: 489 GALHSPCTPRPVPDTNSCGPQEVVRHLDEG 518
Score = 39 (18.8 bits), Expect = 3.0e-71, Sum P(4) = 3.0e-71
Identities = 33/114 (28%), Positives = 46/114 (40%)
Query: 222 KVFFSDECSILHALREGLQE-IYSPNNASYSVNKVEQLIEPEKSGPSSGAESCMFLEQLS 280
+V E H L GL E + +P S+S V PE + AES ++
Sbjct: 525 RVDIEQESGPSH-LSGGLGEGLSAPEAGSHS-GGVSAACAPEDTLSQGSAESPE-IDHHP 581
Query: 281 PDGNGCIEILNEQQ----------ISKGNTPKTVEVD--TLHSDALEGLVHSSN 322
D G ++ N Q +S NT K + D L+SDA GLV + N
Sbjct: 582 ADAGGQLDHENSGQTCRISPQPADMSFSNT-KRFKKDGAPLNSDAHPGLVKTRN 634
>UNIPROTKB|P54278 [details] [associations]
symbol:PMS2 "Mismatch repair endonuclease PMS2"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004519 "endonuclease activity" evidence=IEA] [GO:0016447
"somatic recombination of immunoglobulin gene segments"
evidence=IEA] [GO:0042493 "response to drug" evidence=IEA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IBA]
[GO:0016446 "somatic hypermutation of immunoglobulin genes"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0032407 "MutSalpha complex binding" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IC] [GO:0006298 "mismatch repair" evidence=IDA]
[GO:0032138 "single base insertion or deletion binding"
evidence=IDA] [GO:0003697 "single-stranded DNA binding"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IBA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
GO:GO:0042493 GO:GO:0016887 GO:GO:0006298 GO:GO:0090305
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0004519 EMBL:AC005995
MIM:276300 Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007131 Orphanet:144 GO:GO:0016446
GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032138 GO:GO:0016447 KO:K10858
HOGENOM:HOG000165474 OMA:LDKPWNC HPA:CAB010235 EMBL:U13696
EMBL:AB103082 EMBL:AB103083 EMBL:AB103085 EMBL:U14658 EMBL:AK312390
EMBL:BC093921 IPI:IPI00418329 IPI:IPI00746337 IPI:IPI00873034
IPI:IPI00874088 PIR:S47598 RefSeq:NP_000526.1 UniGene:Hs.632637
PDB:1EA6 PDB:1H7S PDB:1H7U PDBsum:1EA6 PDBsum:1H7S PDBsum:1H7U
ProteinModelPortal:P54278 SMR:P54278 DIP:DIP-27602N IntAct:P54278
MINT:MINT-2804140 STRING:P54278 PhosphoSite:P54278 DMDM:1709685
SWISS-2DPAGE:P54278 PRIDE:P54278 Ensembl:ENST00000265849
Ensembl:ENST00000382321 Ensembl:ENST00000406569 GeneID:5395
KEGG:hsa:5395 UCSC:uc003spk.3 UCSC:uc010kte.3 UCSC:uc010ktf.2
CTD:5395 GeneCards:GC07M005979 HGNC:HGNC:9122 MIM:600259 MIM:614337
neXtProt:NX_P54278 PharmGKB:PA33448 HOVERGEN:HBG008219
InParanoid:P54278 PhylomeDB:P54278 EvolutionaryTrace:P54278
GenomeRNAi:5395 NextBio:20918 ArrayExpress:P54278 Bgee:P54278
CleanEx:HS_PMS2 Genevestigator:P54278 GermOnline:ENSG00000122512
Uniprot:P54278
Length = 862
Score = 497 (180.0 bits), Expect = 1.1e-90, Sum P(5) = 1.1e-90
Identities = 104/207 (50%), Positives = 136/207 (65%)
Query: 611 KEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKL 670
K F M++IGQFNLGFII KL++D+FIVDQHA DEKYNFE L Q TVL Q L+ P L
Sbjct: 670 KTMFAEMEIIGQFNLGFIITKLNEDIFIVDQHATDEKYNFEMLQQHTVLQGQRLIAPQTL 729
Query: 671 DLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIST 730
+LT E V +++I RKNGF D +A R +L ++P SK TFG +DV +LI
Sbjct: 730 NLTAVNEAVLIENLEIFRKNGFDFVIDENAPVTERAKLISLPTSKNWTFGPQDVDELIFM 789
Query: 731 LADNQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLA 789
L+D+ G +C PSRV+ M ASRACR S+MIG AL +EM+K++ H+
Sbjct: 790 LSDSPGV--------------MCRPSRVKQMFASRACRKSVMIGTALNTSEMKKLITHMG 835
Query: 790 DLNSPWNCPHGRPTMRHLVDLTTIRKN 816
+++ PWNCPHGRPTMRH+ +L I +N
Sbjct: 836 EMDHPWNCPHGRPTMRHIANLGVISQN 862
Score = 222 (83.2 bits), Expect = 1.1e-90, Sum P(5) = 1.1e-90
Identities = 42/77 (54%), Positives = 59/77 (76%)
Query: 4 ETPTNSPT--IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEE 61
E+ + P I+PI++ VH+IC+GQV+ LS+AVKELVENSLDAGAT+I++ LK+YG +
Sbjct: 5 ESSSTEPAKAIKPIDRKSVHQICSGQVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVD 64
Query: 62 WFQVVDNGCGISPNNFK 78
+V DNGCG+ NF+
Sbjct: 65 LIEVSDNGCGVEEENFE 81
Score = 216 (81.1 bits), Expect = 1.1e-90, Sum P(5) = 1.1e-90
Identities = 43/114 (37%), Positives = 69/114 (60%)
Query: 149 VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQYPIAIMNFIVP 208
+ GF+S+ G GR+ DRQ+FF+N RP D KV +LVNE+Y N QYP ++N V
Sbjct: 269 ISGFISQCTHGVGRSSTDRQFFFINRRPCDPAKVCRLVNEVYHMYNRHQYPFVVLNISVD 328
Query: 209 TRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASYSVNKVEQLIEPE 262
+ D+NVTPDKR++ +E +L L+ L ++ + +V++ + L++ E
Sbjct: 329 SECVDINVTPDKRQILLQEEKLLLAVLKTSLIGMFDSDVNKLNVSQ-QPLLDVE 381
Score = 115 (45.5 bits), Expect = 1.1e-90, Sum P(5) = 1.1e-90
Identities = 29/74 (39%), Positives = 42/74 (56%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP- 138
+ V + AY +I+ G+R CTN G+ + V+ T GS S+K+NI +VFG L P
Sbjct: 183 KMVQVLHAYCIISAGIRVSCTNQLGQGKRQPVVCTGGSPSIKENIGSVFGQKQLQSLIPF 242
Query: 139 VAICKSDS-CKVEG 151
V + SDS C+ G
Sbjct: 243 VQLPPSDSVCEEYG 256
Score = 39 (18.8 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 10/36 (27%), Positives = 19/36 (52%)
Query: 718 TFGVEDVKDLISTLADNQGECSIISSYKMDTADSVC 753
T G +K+ I ++ + S+I ++ +DSVC
Sbjct: 217 TGGSPSIKENIGSVFGQKQLQSLIPFVQLPPSDSVC 252
Score = 38 (18.4 bits), Expect = 1.1e-90, Sum P(5) = 1.1e-90
Identities = 11/46 (23%), Positives = 17/46 (36%)
Query: 460 KADKVSKEIENILSSEGNTNEKPREELVTQEKATPLLNVPSIVSSS 505
K D + S T KP + + +PL ++SSS
Sbjct: 412 KKDVSISRLREAFSLRHTTENKPHSPKTPEPRRSPLGQKRGMLSSS 457
>FB|FBgn0011660 [details] [associations]
symbol:Pms2 "Pms2" species:7227 "Drosophila melanogaster"
[GO:0006298 "mismatch repair" evidence=ISS;IBA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0032389 "MutLalpha complex" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0016887 "ATPase
activity" evidence=IBA] [GO:0032407 "MutSalpha complex binding"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 EMBL:AE013599 GO:GO:0005524
GO:GO:0005875 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 eggNOG:COG0323 GO:GO:0032389 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9
KO:K10858 GeneTree:ENSGT00530000063289 CTD:5395 RefSeq:NP_477023.1
UniGene:Dm.4816 ProteinModelPortal:A1ZA03 SMR:A1ZA03 STRING:A1ZA03
PaxDb:A1ZA03 PRIDE:A1ZA03 EnsemblMetazoa:FBtr0087388 GeneID:36705
KEGG:dme:Dmel_CG8169 UCSC:CG8169-RA FlyBase:FBgn0011660
InParanoid:A1ZA03 OMA:GQGKRST OrthoDB:EOG4FJ6QW PhylomeDB:A1ZA03
GenomeRNAi:36705 NextBio:799969 Bgee:A1ZA03 Uniprot:A1ZA03
Length = 899
Score = 512 (185.3 bits), Expect = 1.2e-90, Sum P(5) = 1.2e-90
Identities = 109/212 (51%), Positives = 136/212 (64%)
Query: 611 KEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKL 670
KEDF RM++IGQFNLGFII KL+ DLFIVDQHA DEKYNFE L ++T L Q L P L
Sbjct: 695 KEDFARMEIIGQFNLGFIIVKLEDDLFIVDQHATDEKYNFETLQRTTQLEYQRLAVPQNL 754
Query: 671 DLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIST 730
+LT E+V H+D+ KNGF E D A A + RL P SK+ FG ED+ +LI
Sbjct: 755 ELTAVNEMVLLNHIDVFEKNGFKFEVDHEAPATKKVRLLGKPHSKRWEFGKEDIDELIFM 814
Query: 731 LADNQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGRNE-MQKILEHL 788
L D ++C PSRVRAM ASRACR S+MIG AL RN M++++ +
Sbjct: 815 LQDAP-------------EGTICRPSRVRAMFASRACRKSVMIGTALSRNTTMRRLITQM 861
Query: 789 ADLNSPWNCPHGRPTMRHLVDLTTIRKNIDEN 820
++ PWNCPHGRPTMRHL+++ + N DEN
Sbjct: 862 GEIEQPWNCPHGRPTMRHLINIAMLI-NSDEN 892
Score = 222 (83.2 bits), Expect = 1.2e-90, Sum P(5) = 1.2e-90
Identities = 52/163 (31%), Positives = 93/163 (57%)
Query: 148 KVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQYPIAIMNFIV 207
++EGF+S G+GR+ DRQ+FFVN RP D ++K++NE+Y N +Q P +N I
Sbjct: 300 QLEGFISSCRHGAGRSSRDRQFFFVNSRPCDPKNIAKVMNEVYHRYNVQQQPFIYLNIIT 359
Query: 208 PTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASYSVNK--VEQLIEPEKSG 265
DVN+TPDKR++ ++E +L AL++ L + + A++ + + ++EP+ +
Sbjct: 360 ARSDVDVNLTPDKRQLLINNERILLLALKKSLLDTFGQTPATFQMQNTTIVSMLEPKTN- 418
Query: 266 PSSGAESCMFLEQLSPDGNGCIEILNEQQISKGNTPKTVEVDT 308
SG F ++ S D E ++E+ + +T + ++V T
Sbjct: 419 --SGKTK--FPKESSKDDQH--EEVSEEDVPTTSTQRFMDVLT 455
Score = 192 (72.6 bits), Expect = 1.2e-90, Sum P(5) = 1.2e-90
Identities = 41/79 (51%), Positives = 53/79 (67%)
Query: 2 DVETPTN--SPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYG 59
DV PT S I+ I K VH+IC+GQV+ L+ AVKELVENS+DAGAT +EI LK+ G
Sbjct: 15 DVPPPTTALSGQIKAIGKDTVHKICSGQVVLSLAVAVKELVENSIDAGATLVEIKLKDQG 74
Query: 60 EEWFQVVDNGCGISPNNFK 78
+ +V DNG G+ N +
Sbjct: 75 LQSVEVSDNGSGVEEMNLE 93
Score = 118 (46.6 bits), Expect = 1.2e-90, Sum P(5) = 1.2e-90
Identities = 24/57 (42%), Positives = 33/57 (57%)
Query: 76 NFKVRAVFLCQ---AYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFG 129
N K +CQ AY L+ KGVR +C+N T K K++VL+T G + NI +FG
Sbjct: 188 NIKKEFTKMCQILQAYCLVTKGVRILCSNHTPKGAKTIVLQTHGDQEVMANISAIFG 244
Score = 42 (19.8 bits), Expect = 1.2e-90, Sum P(5) = 1.2e-90
Identities = 10/47 (21%), Positives = 22/47 (46%)
Query: 330 TLKAHDDKSADRLSKFNCMKLIGPHNVPTEENCPSPSRVMAKNITED 376
+LKAH+ + DR ++ +L + +N + + + + ED
Sbjct: 651 SLKAHEQQQRDRRTRTKLQRLRFKTEINPNQNTSAEAELQREIDKED 697
>UNIPROTKB|F1PNW0 [details] [associations]
symbol:PMS2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585 KO:K10858
GeneTree:ENSGT00530000063289 CTD:5395 EMBL:AAEX03004285
RefSeq:XP_536879.3 Ensembl:ENSCAFT00000024713 GeneID:479751
KEGG:cfa:479751 Uniprot:F1PNW0
Length = 866
Score = 491 (177.9 bits), Expect = 1.3e-90, Sum P(4) = 1.3e-90
Identities = 103/207 (49%), Positives = 133/207 (64%)
Query: 611 KEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKL 670
K F M++IGQFNLGFII KL D+FIVDQHA DEKYNFE L Q TVL Q L+ P L
Sbjct: 674 KTMFAEMEIIGQFNLGFIITKLKADIFIVDQHATDEKYNFEMLQQHTVLQGQRLIAPQTL 733
Query: 671 DLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIST 730
+LT E + +++I RKNGF D A R +L ++P SK TFG +D+ +LI
Sbjct: 734 NLTAVNEAILIENLEIFRKNGFDFVIDEGAPVTERAKLISLPTSKNWTFGPQDIDELIFM 793
Query: 731 LADNQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLA 789
L+D+ G +C PSRVR M ASRACR S+MIG AL +EM+K++ H+
Sbjct: 794 LSDSPGV--------------MCRPSRVRQMFASRACRKSVMIGTALNTSEMKKLITHMG 839
Query: 790 DLNSPWNCPHGRPTMRHLVDLTTIRKN 816
+++ PWNCPHGRPTMRH+ +L I +N
Sbjct: 840 EMDHPWNCPHGRPTMRHIANLDVISQN 866
Score = 225 (84.3 bits), Expect = 1.3e-90, Sum P(4) = 1.3e-90
Identities = 45/114 (39%), Positives = 69/114 (60%)
Query: 149 VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQYPIAIMNFIVP 208
+ GF+S G GR+ DRQ+FF+N RP D KVS+LVNE+Y N QYP ++N V
Sbjct: 269 ISGFISHCAHGVGRSSTDRQFFFINRRPCDPAKVSRLVNEVYHMYNRHQYPFIVLNISVD 328
Query: 209 TRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASYSVNKVEQLIEPE 262
+ D+NVTPDKR++ +E +L L+ L ++ N +V++ + L++ E
Sbjct: 329 SECIDINVTPDKRQILLQEEKLLLAVLKTSLIAMFDSNVNKLTVSQ-QPLLDIE 381
Score = 220 (82.5 bits), Expect = 1.3e-90, Sum P(4) = 1.3e-90
Identities = 39/67 (58%), Positives = 56/67 (83%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+PI++ VH+IC+GQV+ LS+AVKELVENS+DAGAT+I++ LK+YG ++ +V DNGCG
Sbjct: 15 IKPIDRKSVHQICSGQVVLSLSTAVKELVENSVDAGATNIDLKLKDYGVDFIEVSDNGCG 74
Query: 72 ISPNNFK 78
+ NF+
Sbjct: 75 VKEENFE 81
Score = 120 (47.3 bits), Expect = 1.3e-90, Sum P(4) = 1.3e-90
Identities = 29/74 (39%), Positives = 44/74 (59%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP- 138
+ V + AY +I+ G+R C+N G+ + +V+ T GSSS+K+NI +VFG L P
Sbjct: 183 KMVQVLHAYCIISVGIRISCSNQVGQGRRQLVVCTSGSSSVKENIGSVFGQKQLQSLIPF 242
Query: 139 VAICKSDS-CKVEG 151
V + SDS C+ G
Sbjct: 243 VQLPPSDSVCEEYG 256
Score = 42 (19.8 bits), Expect = 4.8e-13, Sum P(3) = 4.8e-13
Identities = 11/36 (30%), Positives = 19/36 (52%)
Query: 718 TFGVEDVKDLISTLADNQGECSIISSYKMDTADSVC 753
T G VK+ I ++ + S+I ++ +DSVC
Sbjct: 217 TSGSSSVKENIGSVFGQKQLQSLIPFVQLPPSDSVC 252
Score = 41 (19.5 bits), Expect = 1.3e-62, Sum P(3) = 1.3e-62
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 564 SSCHTSGSVKMRRCF 578
S+CHTS V R F
Sbjct: 123 STCHTSAKVGTRLAF 137
Score = 40 (19.1 bits), Expect = 1.3e-43, Sum P(3) = 1.3e-43
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 18 GVVHRICAGQVIKDLSSAVKELVENSLDAG 47
G +H C + + D +S + V LD G
Sbjct: 458 GALHSPCTPRPVPDTNSCGPQEVVRHLDEG 487
Score = 39 (18.8 bits), Expect = 3.5e-71, Sum P(4) = 3.5e-71
Identities = 33/114 (28%), Positives = 46/114 (40%)
Query: 222 KVFFSDECSILHALREGLQE-IYSPNNASYSVNKVEQLIEPEKSGPSSGAESCMFLEQLS 280
+V E H L GL E + +P S+S V PE + AES ++
Sbjct: 494 RVDIEQESGPSH-LSGGLGEGLSAPEAGSHS-GGVSAACAPEDTLSQGSAESPE-IDHHP 550
Query: 281 PDGNGCIEILNEQQ----------ISKGNTPKTVEVD--TLHSDALEGLVHSSN 322
D G ++ N Q +S NT K + D L+SDA GLV + N
Sbjct: 551 ADAGGQLDHENSGQTCRISPQPADMSFSNT-KRFKKDGAPLNSDAHPGLVKTRN 603
>ZFIN|ZDB-GENE-030131-686 [details] [associations]
symbol:pms2 "PMS2 postmeiotic segregation increased
2 (S. cerevisiae)" species:7955 "Danio rerio" [GO:0030983
"mismatched DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058
ZFIN:ZDB-GENE-030131-686 GO:GO:0005524 GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
GeneTree:ENSGT00530000063289 EMBL:CR932017 IPI:IPI00901265
Ensembl:ENSDART00000111565 Bgee:E7F558 Uniprot:E7F558
Length = 851
Score = 484 (175.4 bits), Expect = 1.4e-88, Sum P(4) = 1.4e-88
Identities = 161/456 (35%), Positives = 221/456 (48%)
Query: 378 ESDSRSRCIQSSLNK---FVTVSKRKYESIARPL---TEMPLLRNQSLH--CQMK-KSNS 428
+S ++ C S K FV+ SK K PL T + + L C +K KS
Sbjct: 432 QSSHKAACAGPSQKKMLSFVSCSK-KVTDFLPPLKSPTTFTAVSSIKLSTVCSVKYKSTF 490
Query: 429 DMDAVDTRSPVRRHLVD--DIAKLNKIEPFKCNKADKVSKEIENILSSEGNTNEKPREEL 486
D DA + + + D +I + N E F + +K + E I+ + N E L
Sbjct: 491 DSDADGSGAASLKSAEDYPEIKQENHSESFLHHGINKTDVKAE-IVDKPMDENLWSYETL 549
Query: 487 VTQEKATPLLNVPSIVSSSNDLKKNSEDLSVAASHL-QF---SGSI-LDAPVPSSSLDIC 541
+ K+ N + S + ED A + L F + S+ DAPV +
Sbjct: 550 -PETKSEQHQNR---IFSPEAKRARREDEPPAQNCLVDFKSRNASLKFDAPVNIKKKTVL 605
Query: 542 STLQFSIQDLRKRRQQRLSIMQSSCHTSGSVKMRRCFAAATLELSQPXXXXXXXXXXXXX 601
L FS Q+L KR QRL ++ + K RR F A P
Sbjct: 606 --LPFSQQELSKR-MQRLQAQRTKSNEQ-EPKYRR-FRAKI----NPGENQTAEDELKKE 656
Query: 602 XXXXXXXFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQ 661
K+ F M++IGQFNLGFII K+ DLFI+DQHA DEKYNFE L Q+TVL
Sbjct: 657 IS-------KDMFKEMEIIGQFNLGFIITKIKSDLFIIDQHATDEKYNFEMLQQNTVLKG 709
Query: 662 QPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGV 721
Q L+ P L L E V +++I RKNGF D A R +L ++P SK TFG
Sbjct: 710 QRLIVPQSLHLPAISETVLMENLEIFRKNGFDFLIDEDAQVMDRVKLVSLPTSKNWTFGP 769
Query: 722 EDVKDLISTLADNQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGRNE 780
D+++LI L+D+ G +C PSRVR M ASRACR S+M+G AL +E
Sbjct: 770 NDIEELIFMLSDSPG--------------IMCRPSRVRQMFASRACRKSVMVGTALNTSE 815
Query: 781 MQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKN 816
M+K++ H+ ++ PWNCPHGRPTMRHL +L I ++
Sbjct: 816 MKKLVLHMGEIEQPWNCPHGRPTMRHLANLDMISQD 851
Score = 233 (87.1 bits), Expect = 1.4e-88, Sum P(4) = 1.4e-88
Identities = 50/129 (38%), Positives = 71/129 (55%)
Query: 145 DSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQYPIAIMN 204
D ++GF+S+ G GR+ DRQ+FF+N RP D KVSKLVNE+Y N QYP +N
Sbjct: 262 DLFNIDGFVSQGDHGVGRSATDRQFFFINKRPCDPVKVSKLVNEVYHMYNRHQYPFVALN 321
Query: 205 FIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASYSVNKVEQLIEPEKS 264
V + DVNVTPDKR++ +E +L L+ L ++ S+N + S
Sbjct: 322 IAVASDCVDVNVTPDKRQILLQEEKLLLAILKSSLIAMFETGVNKISLNHISPAFT-SMS 380
Query: 265 GPSSGAESC 273
P+ G +C
Sbjct: 381 RPT-GTSAC 388
Score = 187 (70.9 bits), Expect = 1.4e-88, Sum P(4) = 1.4e-88
Identities = 35/67 (52%), Positives = 52/67 (77%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ I+K VH+IC+GQV+ L++AVKELVENS+DAGAT++++ LK+ G E +V DNG G
Sbjct: 12 IKAIDKQSVHQICSGQVVLSLATAVKELVENSIDAGATNVDVKLKDNGIELVEVSDNGKG 71
Query: 72 ISPNNFK 78
+ N++
Sbjct: 72 VEEQNYE 78
Score = 133 (51.9 bits), Expect = 1.4e-88, Sum P(4) = 1.4e-88
Identities = 29/70 (41%), Positives = 42/70 (60%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
+ +F+ Q+Y +I+ GVR C+N G+ +S VL T GS+S++DNI VFG L P
Sbjct: 180 KMIFVLQSYCIISTGVRITCSNQMGQGKRSTVLCTSGSNSMRDNIGAVFGPKQLQSLIPF 239
Query: 140 A-ICKSDSCK 148
I +DS K
Sbjct: 240 RQISPNDSVK 249
>UNIPROTKB|F1RFM9 [details] [associations]
symbol:PMS2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0032407 "MutSalpha complex binding" evidence=IEA]
[GO:0032389 "MutLalpha complex" evidence=IEA] [GO:0032138 "single
base insertion or deletion binding" evidence=IEA] [GO:0016447
"somatic recombination of immunoglobulin gene segments"
evidence=IEA] [GO:0016446 "somatic hypermutation of immunoglobulin
genes" evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
Pfam:PF01119 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0016446
GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032138 GO:GO:0016447 KO:K10858
OMA:LDKPWNC GeneTree:ENSGT00530000063289 CTD:5395 EMBL:FP102636
RefSeq:XP_003124331.1 Ensembl:ENSSSCT00000008330 GeneID:100514342
KEGG:ssc:100514342 Uniprot:F1RFM9
Length = 852
Score = 500 (181.1 bits), Expect = 1.1e-83, Sum P(3) = 1.1e-83
Identities = 105/207 (50%), Positives = 135/207 (65%)
Query: 611 KEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKL 670
KE F M++IGQFNLGFII KL+ D+FIVDQHA DEKYNFE L Q TVL Q L+ P L
Sbjct: 660 KEMFAEMEIIGQFNLGFIITKLNADIFIVDQHATDEKYNFEMLQQHTVLQGQRLIVPQTL 719
Query: 671 DLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIST 730
+LT E V ++DI RKNGF D A R +L ++P SK TFG +D+ +LI
Sbjct: 720 NLTAVNEAVLIENLDIFRKNGFDFVIDEDAPVTERAKLISLPTSKNWTFGPQDIDELIFM 779
Query: 731 LADNQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLA 789
L+D+ G +C PSRVR M ASRACR S+MIG AL +EM++++ H+
Sbjct: 780 LSDSPGV--------------MCRPSRVRQMFASRACRKSVMIGTALNTSEMRRLVSHMG 825
Query: 790 DLNSPWNCPHGRPTMRHLVDLTTIRKN 816
+++ PWNCPHGRPTMRH+ +L I +N
Sbjct: 826 EMDHPWNCPHGRPTMRHIANLDVISQN 852
Score = 232 (86.7 bits), Expect = 1.1e-83, Sum P(3) = 1.1e-83
Identities = 54/158 (34%), Positives = 89/158 (56%)
Query: 105 KNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNL 164
K ++S++ Q S D++ FG++ + L + C + GF+S+ G GR+
Sbjct: 234 KQLQSLISFVQLPPS--DSVCEEFGLSCSDALHNL-FC------ISGFISRCTHGVGRSS 284
Query: 165 GDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVF 224
DRQ+FF+N RP D KVS+LVNE+Y N QYP ++N V + D+NVTPDKR++
Sbjct: 285 TDRQFFFINRRPCDPAKVSRLVNEVYHLYNRHQYPFVVLNISVDSECVDINVTPDKRQIL 344
Query: 225 FSDECSILHALREGLQEIYSPNNASYSVNKVEQLIEPE 262
+E +L L+ L +++ + SV + + L++ E
Sbjct: 345 LQEEKLLLAVLKTSLIDMFDNDVNKISVRQ-QSLLDVE 381
Score = 218 (81.8 bits), Expect = 1.1e-83, Sum P(3) = 1.1e-83
Identities = 41/77 (53%), Positives = 60/77 (77%)
Query: 4 ETPTN--SPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEE 61
E P++ + I+PI++ VH+IC+GQV+ LS+AVKELVENS+DAGAT+I++ LK+YG +
Sbjct: 5 EGPSSELAKAIKPIDRKSVHQICSGQVVLSLSTAVKELVENSVDAGATNIDLRLKDYGMD 64
Query: 62 WFQVVDNGCGISPNNFK 78
+V DNGCG+ NF+
Sbjct: 65 LIEVSDNGCGVEEENFE 81
Score = 118 (46.6 bits), Expect = 4.8e-73, Sum P(4) = 4.8e-73
Identities = 27/74 (36%), Positives = 43/74 (58%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMN-IYNCLEP 138
+ V + AY +I+ GVR CTN G+ + V+ T G +S+K+NI +VFG + + +
Sbjct: 183 KMVQVLHAYCIISSGVRVTCTNQVGQGKRQPVVSTSGGASIKENIGSVFGQKQLQSLISF 242
Query: 139 VAICKSDS-CKVEG 151
V + SDS C+ G
Sbjct: 243 VQLPPSDSVCEEFG 256
Score = 48 (22.0 bits), Expect = 4.8e-73, Sum P(4) = 4.8e-73
Identities = 37/166 (22%), Positives = 79/166 (47%)
Query: 383 SRCI----QSSLNK-FVTVSKRKYE--SIARPLTEMPLLRNQSLHCQMKKSNS-DMDAVD 434
SRC +SS ++ F +++R + ++R + E+ L N+ + + + S D + VD
Sbjct: 274 SRCTHGVGRSSTDRQFFFINRRPCDPAKVSRLVNEVYHLYNRHQYPFVVLNISVDSECVD 333
Query: 435 TR-SPVRRHLV--DD-----IAKLNKIEPFKCNKADKVSKEIENILSSEGNTNEKPREEL 486
+P +R ++ ++ + K + I+ F N +K+S +++L EGN ++ E
Sbjct: 334 INVTPDKRQILLQEEKLLLAVLKTSLIDMFD-NDVNKISVRQQSLLDVEGNLIKRHPAE- 391
Query: 487 VTQEKATPLLNVPSIVSSSNDLKKNSEDLSVAASHLQFSGSILDAP 532
T+ P+ + ++ K+ +V S L+ + S+ AP
Sbjct: 392 -TERPGPEQQEHPAPLKAAGQEKR-----AVTISRLREAFSLRQAP 431
Score = 44 (20.5 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 11/36 (30%), Positives = 20/36 (55%)
Query: 718 TFGVEDVKDLISTLADNQGECSIISSYKMDTADSVC 753
T G +K+ I ++ + S+IS ++ +DSVC
Sbjct: 217 TSGGASIKENIGSVFGQKQLQSLISFVQLPPSDSVC 252
>POMBASE|SPAC19G12.02c [details] [associations]
symbol:pms1 "MutL family mismatch-repair protein Pms1"
species:4896 "Schizosaccharomyces pombe" [GO:0000228 "nuclear
chromosome" evidence=ISO] [GO:0003677 "DNA binding" evidence=ISO]
[GO:0005524 "ATP binding" evidence=ISO] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006298 "mismatch repair" evidence=IGI;IMP]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0030983 "mismatched
DNA binding" evidence=IEA] [GO:0032389 "MutLalpha complex"
evidence=IEA] [GO:0043570 "maintenance of DNA repeat elements"
evidence=IMP] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR015434 Pfam:PF01119 Pfam:PF02518 Pfam:PF08676
SMART:SM00387 SMART:SM00853 PomBase:SPAC19G12.02c Prosite:PS00058
GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0016887
GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0000228 GO:GO:0043570 eggNOG:COG0323
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
PANTHER:PTHR10073:SF9 KO:K10858 EMBL:X96581 PIR:T37989
RefSeq:NP_594417.1 ProteinModelPortal:P54280 STRING:P54280
EnsemblFungi:SPAC19G12.02c.1 GeneID:2542582 KEGG:spo:SPAC19G12.02c
HOGENOM:HOG000165474 OMA:LDKPWNC OrthoDB:EOG4FFH9B NextBio:20803632
Uniprot:P54280
Length = 794
Score = 456 (165.6 bits), Expect = 1.2e-83, Sum P(4) = 1.2e-83
Identities = 96/203 (47%), Positives = 131/203 (64%)
Query: 611 KEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKL 670
K DF RM+V+GQFN GFI+ +LFI+DQHA+DEK+N+E L + V+N Q L+ P +L
Sbjct: 605 KADFLRMRVVGQFNRGFIVVVHGNNLFIIDQHASDEKFNYEHLKSNLVINSQDLVLPKRL 664
Query: 671 DLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIST 730
DL EE V H+D+IR+ GF + D + G R L +VP SK + F D+ ++IS
Sbjct: 665 DLAATEETVLIDHIDLIRRKGFGVAIDLNQRVGNRCTLLSVPTSKNVIFDTSDLLEIISV 724
Query: 731 LADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLAD 790
L+++ ++D S R+ MLAS+ACRSS+MIG AL +EM I+ HLA+
Sbjct: 725 LSEHP---------QIDPFSS----RLERMLASKACRSSVMIGRALTISEMNTIVRHLAE 771
Query: 791 LNSPWNCPHGRPTMRHLVDLTTI 813
L+ PWNCPHGRPTMRHL+ L I
Sbjct: 772 LSKPWNCPHGRPTMRHLLRLKDI 794
Score = 274 (101.5 bits), Expect = 1.2e-83, Sum P(4) = 1.2e-83
Identities = 61/193 (31%), Positives = 105/193 (54%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
+A+ L QAYA I+ RF+ + T + K + L T + +K NI+ VFG + + L P
Sbjct: 173 KAISLLQAYATISTNKRFMVYHQTKNSGKLLQLSTNSNKDMKLNIMNVFGTKVSSSLIPW 232
Query: 140 AICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQYP 199
+D +EG++S+P GS R +RQ F+N R V+LPK+++++ E++K + Q P
Sbjct: 233 ----NDGI-IEGYISRPHVGSTRASNERQMLFINRRLVNLPKIARVIQEVFKPYSMAQSP 287
Query: 200 IAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASYSVNKVEQLI 259
+N + D+NV+PDK+ VF S+E SI+ ++ LQ + + S ++ + +
Sbjct: 288 FFAINLRITNGTIDINVSPDKKSVFLSEEDSIIEFIKNSLQNLCESCGHAISCSRSQSIF 347
Query: 260 EPEKSGPSSGAES 272
P S +S
Sbjct: 348 SYSSQIPDSSGDS 360
Score = 212 (79.7 bits), Expect = 1.2e-83, Sum P(4) = 1.2e-83
Identities = 40/68 (58%), Positives = 53/68 (77%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
T++PI+ VH+IC+GQVI D++SAVKELVENSLD+GAT+IEI K YG +VVDNG
Sbjct: 3 TVKPIDANTVHKICSGQVITDVASAVKELVENSLDSGATTIEIRFKNYGINSIEVVDNGS 62
Query: 71 GISPNNFK 78
GI +++
Sbjct: 63 GIDAGDYE 70
Score = 50 (22.7 bits), Expect = 1.2e-83, Sum P(4) = 1.2e-83
Identities = 24/102 (23%), Positives = 39/102 (38%)
Query: 417 QSLHCQMKKSNSDMDAVDTRSPVRRHLVDDIAKLNKIEPFKCNKAD--KVSKEIENILSS 474
QS+ +++ D RSP +R LV+ A+ I A +VSK + L
Sbjct: 367 QSIPATESETSDDSSFSYKRSPCKRKLVEATAQ-PAISTSVAEGASLAQVSKPLPERLQK 425
Query: 475 EGNTNEKPREELVTQEKATPLLNVPSIVSSSNDLKKNSEDLS 516
+ P E VT + SS++ + + D S
Sbjct: 426 DSMRRSSPLNEKVTASSERMKKKLALFASSTDTSMQKTIDSS 467
Score = 44 (20.5 bits), Expect = 5.2e-60, Sum P(5) = 5.2e-60
Identities = 13/40 (32%), Positives = 17/40 (42%)
Query: 89 ALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVF 128
+L A G + T T + K V L SLKD + F
Sbjct: 102 SLCAVGQVIISTATQNEAPKGVQLNLDHEGSLKDKLTIPF 141
Score = 40 (19.1 bits), Expect = 8.4e-58, Sum P(3) = 8.4e-58
Identities = 13/62 (20%), Positives = 26/62 (41%)
Query: 426 SNSDMDAVDTRSPVRRHLVDDIAKLNKIEPFKCN--KADKVSK--EIENILSSEGNTNEK 481
+ S +DA D S ++H I +E + + + +S + ++ S NE
Sbjct: 60 NGSGIDAGDYESIGKKHFTSKITDFEDLEALQTFGFRGEALSSLCAVGQVIISTATQNEA 119
Query: 482 PR 483
P+
Sbjct: 120 PK 121
Score = 39 (18.8 bits), Expect = 1.7e-36, Sum P(3) = 1.7e-36
Identities = 16/71 (22%), Positives = 26/71 (36%)
Query: 754 PSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVD---- 809
P + +S + + + + MQK ++ L P N P P L D
Sbjct: 433 PLNEKVTASSERMKKKLALFASSTDTSMQKTIDSSFPLKQPINKPSSNPNNLLLNDPSPA 492
Query: 810 LTTIRKNIDEN 820
T + K I+ N
Sbjct: 493 STPVAKTINLN 503
Score = 37 (18.1 bits), Expect = 5.2e-60, Sum P(5) = 5.2e-60
Identities = 9/30 (30%), Positives = 17/30 (56%)
Query: 244 SPNNASYSVNKVEQLIEPEKSGPSSGAESC 273
SP+ S +++ + +IE K+ + ESC
Sbjct: 305 SPDKKSVFLSEEDSIIEFIKNSLQNLCESC 334
Score = 37 (18.1 bits), Expect = 2.1e-39, Sum P(2) = 2.1e-39
Identities = 7/30 (23%), Positives = 15/30 (50%)
Query: 5 TPTNSPTIRPINKGVVHRICAGQVIKDLSS 34
+P ++P + IN + + + + LSS
Sbjct: 490 SPASTPVAKTINLNEIESVHNAESVSTLSS 519
>UNIPROTKB|D3ZZF0 [details] [associations]
symbol:Pms2 "Protein Pms2" species:10116 "Rattus
norvegicus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006298
"mismatch repair" evidence=IEA] [GO:0030983 "mismatched DNA
binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
Pfam:PF01119 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 RGD:1305483 GO:GO:0005524 GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
IPI:IPI00949446 ProteinModelPortal:D3ZZF0
Ensembl:ENSRNOT00000068106 ArrayExpress:D3ZZF0 Uniprot:D3ZZF0
Length = 850
Score = 504 (182.5 bits), Expect = 5.9e-82, Sum P(5) = 5.9e-82
Identities = 104/208 (50%), Positives = 136/208 (65%)
Query: 610 RKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLK 669
RK F M+++GQFNLGFI+ KL +DLF+VDQHAADEKYNFE L Q TVL Q L+ P
Sbjct: 657 RKSMFAEMEILGQFNLGFIVTKLKEDLFLVDQHAADEKYNFEMLQQHTVLQAQRLITPQT 716
Query: 670 LDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIS 729
L+LT E V +++I RKNGF D A R +L ++P SK TFG +D+ +LI
Sbjct: 717 LNLTAVNEAVLIENLEIFRKNGFDFIIDEDAPVTERAKLISLPTSKNWTFGPQDIDELIF 776
Query: 730 TLADNQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGRNEMQKILEHL 788
L+D+ G +C PSRVR M ASRACR S+MIG AL +EM+K++ H+
Sbjct: 777 MLSDSPGV--------------MCRPSRVRQMFASRACRKSVMIGTALSASEMKKLISHM 822
Query: 789 ADLNSPWNCPHGRPTMRHLVDLTTIRKN 816
+++ PWNCPHGRPTMRH+ +L I +N
Sbjct: 823 GEMDHPWNCPHGRPTMRHIANLDVISQN 850
Score = 215 (80.7 bits), Expect = 5.9e-82, Sum P(5) = 5.9e-82
Identities = 39/67 (58%), Positives = 54/67 (80%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+PI+ VH+IC+GQV+ LS+AVKEL+ENS+DAGATSI++ LK+YG + +V DNGCG
Sbjct: 15 IKPIDGKSVHQICSGQVVLSLSTAVKELIENSVDAGATSIDLRLKDYGVDLIEVSDNGCG 74
Query: 72 ISPNNFK 78
+ NF+
Sbjct: 75 VEEENFE 81
Score = 125 (49.1 bits), Expect = 5.9e-82, Sum P(5) = 5.9e-82
Identities = 32/79 (40%), Positives = 44/79 (55%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP- 138
+ V + QAY +I+ G+R CTN G+ + V+ T GSS +K+NI +VFG L P
Sbjct: 183 KMVQVLQAYCIISAGIRVSCTNQLGQGKRQPVVCTSGSSGMKENIGSVFGQKQLQSLVPF 242
Query: 139 VAICKSDSCKVEGFLSKPG 157
V + SDS E LS G
Sbjct: 243 VQLPPSDSVCEEYCLSACG 261
Score = 116 (45.9 bits), Expect = 5.9e-82, Sum P(5) = 5.9e-82
Identities = 24/74 (32%), Positives = 40/74 (54%)
Query: 189 LYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNA 248
+Y N QYP ++N V + D+NVTPDKR++ +E +L L+ L ++ +
Sbjct: 310 VYHMYNRHQYPFVVLNVSVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLMGMFDSDAN 369
Query: 249 SYSVNKVEQLIEPE 262
SVN+ + L+ E
Sbjct: 370 KLSVNQ-QPLLNVE 382
Score = 40 (19.1 bits), Expect = 5.9e-82, Sum P(5) = 5.9e-82
Identities = 15/68 (22%), Positives = 26/68 (38%)
Query: 351 IGPHNVPTEENCPSPSRVMAKNITEDGESDSRSRCIQSSLNKFVTVSKRKYESIARPLTE 410
+ P N PS V T E D + +NK + + S+A+ + +
Sbjct: 565 LSPSNAKRFRTEDRPSNVGVPQNTSAAEVD-----VAVKINKKIVLLDFSLSSLAKQMKQ 619
Query: 411 MPLLRNQS 418
+ L+ QS
Sbjct: 620 LQHLKQQS 627
Score = 39 (18.8 bits), Expect = 4.2e-73, Sum P(4) = 4.2e-73
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 461 ADKVSKEIENILSSEGNTNEKPREELVTQEKATPLLNV 498
A+K+S + +L+ EGN + E+ QE + P L +
Sbjct: 368 ANKLSVNQQPLLNVEGNLVKLHTAEVGEQENS-PSLRI 404
Score = 37 (18.1 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 9/36 (25%), Positives = 19/36 (52%)
Query: 718 TFGVEDVKDLISTLADNQGECSIISSYKMDTADSVC 753
T G +K+ I ++ + S++ ++ +DSVC
Sbjct: 217 TSGSSGMKENIGSVFGQKQLQSLVPFVQLPPSDSVC 252
>UNIPROTKB|F1NQJ2 [details] [associations]
symbol:Gga.22468 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=IEA] [GO:0006298 "mismatch
repair" evidence=IEA] [GO:0016446 "somatic hypermutation of
immunoglobulin genes" evidence=IEA] [GO:0016447 "somatic
recombination of immunoglobulin gene segments" evidence=IEA]
[GO:0032138 "single base insertion or deletion binding"
evidence=IEA] [GO:0032389 "MutLalpha complex" evidence=IEA]
[GO:0032407 "MutSalpha complex binding" evidence=IEA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
GO:GO:0006298 GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032138 OMA:LDKPWNC
GeneTree:ENSGT00530000063289 EMBL:AADN02023908 EMBL:AADN02023909
IPI:IPI00819916 Ensembl:ENSGALT00000005429 ArrayExpress:F1NQJ2
Uniprot:F1NQJ2
Length = 878
Score = 494 (179.0 bits), Expect = 1.7e-81, Sum P(4) = 1.7e-81
Identities = 104/207 (50%), Positives = 132/207 (63%)
Query: 611 KEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKL 670
KE F +M++IGQFNLGFII KL+ DLFI+DQHA DEKYNFE L Q TVL Q L+ P L
Sbjct: 686 KEMFAKMEIIGQFNLGFIIAKLNSDLFIIDQHATDEKYNFEMLQQHTVLQGQKLIAPQNL 745
Query: 671 DLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIST 730
+LT E V +++I RKNGF + +A R +L ++P SK TFG +D+ +LI
Sbjct: 746 NLTAVNETVLIENLEIFRKNGFDFVINENAPVTQRVKLISLPTSKNWTFGPQDIDELIFM 805
Query: 731 LADNQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLA 789
L+D G +C PSRVR M ASRACR S+MIG AL EM+K++ H+
Sbjct: 806 LSDCPGV--------------MCRPSRVRQMFASRACRKSVMIGTALNVQEMKKLVTHMG 851
Query: 790 DLNSPWNCPHGRPTMRHLVDLTTIRKN 816
++ PWNCPHGRPTMRH+ L I N
Sbjct: 852 EIEHPWNCPHGRPTMRHIASLDLIALN 878
Score = 232 (86.7 bits), Expect = 1.7e-81, Sum P(4) = 1.7e-81
Identities = 57/162 (35%), Positives = 85/162 (52%)
Query: 98 VCTNTTGKNVKSVVLKTQGSSSLKDNIITV-FGMNIYNCLEPVAICKSDSCK----VEGF 152
V + T G N+K + G L+ I V N C E + +D + + GF
Sbjct: 229 VVSTTGGPNLKENIGAVFGKKQLQSLIPFVQLPPNEAVC-EEYGLKSTDLPEKLYSITGF 287
Query: 153 LSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRAC 212
+S+ G GR+ DRQ+FF+N RP D KV KLVNE+Y N QYP ++N V +
Sbjct: 288 ISRCDHGVGRSTTDRQFFFINQRPCDPAKVVKLVNEVYHLYNKHQYPFIVLNICVDSECV 347
Query: 213 DVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASYSVNK 254
D+NVTPDKR++ +E +L L+ L E++ + +VN+
Sbjct: 348 DINVTPDKRQILLQEEKLLLAILKTSLIEMFGSDVNKLNVNQ 389
Score = 204 (76.9 bits), Expect = 1.7e-81, Sum P(4) = 1.7e-81
Identities = 39/68 (57%), Positives = 53/68 (77%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
TI+ I++ VHRIC+GQV+ L +AVKELVENSLDAGAT+I++ LK++G E +V DNG
Sbjct: 29 TIKRIDRESVHRICSGQVVLSLGTAVKELVENSLDAGATNIDVRLKDHGAELIEVSDNGG 88
Query: 71 GISPNNFK 78
G+ NF+
Sbjct: 89 GVEEENFE 96
Score = 125 (49.1 bits), Expect = 2.5e-70, Sum P(4) = 2.5e-70
Identities = 31/77 (40%), Positives = 44/77 (57%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP- 138
+ V + QAY +I+KGVR CTN G+ KS V+ T G +LK+NI VFG L P
Sbjct: 198 KMVQILQAYCIISKGVRINCTNQVGQGKKSPVVSTTGGPNLKENIGAVFGKKQLQSLIPF 257
Query: 139 VAICKSDS-CKVEGFLS 154
V + +++ C+ G S
Sbjct: 258 VQLPPNEAVCEEYGLKS 274
Score = 39 (18.8 bits), Expect = 1.7e-81, Sum P(4) = 1.7e-81
Identities = 31/174 (17%), Positives = 65/174 (37%)
Query: 232 LHALREGLQEIYSPNNASYSVNKVEQLIEPEKSGPSSGAESCMFLEQ--LSPDGNGCIEI 289
L LRE ++ + S KV+Q K S + ++ LS D C E+
Sbjct: 431 LSRLRESFS-LHQTESYFQSPKKVKQRHSSSKQLSLDTILSTVRTQKAVLSEDSESCHEM 489
Query: 290 LNEQQISKGNTPKTVEVDTLHSDALEGLVHSSNENGKGNFTLKAHDDKSADRLSKFNCMK 349
++ + + K ++D+ E N G+ + + S++ + +K
Sbjct: 490 KSKMPVPRKYLRKVDDIDSGFCSTSESDA-GYNTPEAGSCVISEKEFCSSEEQHQNEYLK 548
Query: 350 LIGPHNVPTEENCPSPSRVMAKNITEDGESDSRSRCIQSSLNKFVTVSKRKYES 403
+G H+ + E C + + ++++ Q + N V + K E+
Sbjct: 549 TVG-HSEKSLE-CDIQVLGTEHKLNRVNDCNNQTNLPQEATNSLPRVRRFKNEA 600
>MGI|MGI:104288 [details] [associations]
symbol:Pms2 "postmeiotic segregation increased 2 (S.
cerevisiae)" species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=ISO] [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0004518 "nuclease activity" evidence=IEA]
[GO:0004519 "endonuclease activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IMP] [GO:0006298 "mismatch
repair" evidence=ISO;IGI;IMP;TAS] [GO:0006974 "response to DNA
damage stimulus" evidence=IGI;IMP] [GO:0007126 "meiosis"
evidence=TAS] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016446 "somatic hypermutation of immunoglobulin
genes" evidence=IMP] [GO:0016447 "somatic recombination of
immunoglobulin gene segments" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0030983 "mismatched DNA binding" evidence=IEA] [GO:0032138
"single base insertion or deletion binding" evidence=ISO]
[GO:0032389 "MutLalpha complex" evidence=IDA] [GO:0032407
"MutSalpha complex binding" evidence=IBA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 MGI:MGI:104288 Prosite:PS00058 GO:GO:0005524
GO:GO:0016887 GO:GO:0006298 GO:GO:0003697 GO:GO:0090305
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0004519 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407 GO:GO:0016446
eggNOG:COG0323 GermOnline:ENSMUSG00000029613 GO:GO:0032389
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
GO:GO:0016447 HOGENOM:HOG000165474 HOVERGEN:HBG008219 EMBL:U28724
IPI:IPI00133511 UniGene:Mm.2950 ProteinModelPortal:P54279
SMR:P54279 STRING:P54279 PhosphoSite:P54279 PRIDE:P54279
ChiTaRS:Pms2 Genevestigator:P54279 Uniprot:P54279
Length = 859
Score = 498 (180.4 bits), Expect = 8.9e-81, Sum P(5) = 8.9e-81
Identities = 103/207 (49%), Positives = 135/207 (65%)
Query: 611 KEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKL 670
K F M+++GQFNLGFI+ KL +DLF+VDQHAADEKYNFE L Q TVL Q L+ P L
Sbjct: 667 KSMFAEMEILGQFNLGFIVTKLKEDLFLVDQHAADEKYNFEMLQQHTVLQAQRLITPQTL 726
Query: 671 DLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIST 730
+LT E V +++I RKNGF D A R +L ++P SK TFG +D+ +LI
Sbjct: 727 NLTAVNEAVLIENLEIFRKNGFDFVIDEDAPVTERAKLISLPTSKNWTFGPQDIDELIFM 786
Query: 731 LADNQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLA 789
L+D+ G +C PSRVR M ASRACR S+MIG AL +EM+K++ H+
Sbjct: 787 LSDSPGV--------------MCRPSRVRQMFASRACRKSVMIGTALNASEMKKLITHMG 832
Query: 790 DLNSPWNCPHGRPTMRHLVDLTTIRKN 816
+++ PWNCPHGRPTMRH+ +L I +N
Sbjct: 833 EMDHPWNCPHGRPTMRHVANLDVISQN 859
Score = 213 (80.0 bits), Expect = 8.9e-81, Sum P(5) = 8.9e-81
Identities = 39/67 (58%), Positives = 54/67 (80%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+PI+ VH+IC+GQVI LS+AVKEL+ENS+DAGAT+I++ LK+YG + +V DNGCG
Sbjct: 15 IKPIDGKSVHQICSGQVILSLSTAVKELIENSVDAGATTIDLRLKDYGVDLIEVSDNGCG 74
Query: 72 ISPNNFK 78
+ NF+
Sbjct: 75 VEEENFE 81
Score = 123 (48.4 bits), Expect = 8.9e-81, Sum P(5) = 8.9e-81
Identities = 32/81 (39%), Positives = 47/81 (58%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP- 138
+ V + QAY +I+ GVR CTN G+ + V+ T G+S +K+NI +VFG L P
Sbjct: 183 KMVQVLQAYCIISAGVRVSCTNQLGQGKRHAVVCTSGTSGMKENIGSVFGQKQLQSLIPF 242
Query: 139 VAICKSDS-CKVEGFLSKPGQ 158
V + SD+ C+ G LS G+
Sbjct: 243 VQLPPSDAVCEEYG-LSTSGR 262
Score = 116 (45.9 bits), Expect = 8.9e-81, Sum P(5) = 8.9e-81
Identities = 26/87 (29%), Positives = 44/87 (50%)
Query: 176 PVDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHAL 235
PV + L Y N QYP ++N V + D+NVTPDKR++ +E +L L
Sbjct: 296 PVTQQRSLSLSMRFYHMYNRHQYPFVVLNVSVDSECVDINVTPDKRQILLQEEKLLLAVL 355
Query: 236 REGLQEIYSPNNASYSVNKVEQLIEPE 262
+ L ++ + +VN+ + L++ E
Sbjct: 356 KTSLIGMFDSDANKLNVNQ-QPLLDVE 381
Score = 57 (25.1 bits), Expect = 3.1e-22, Sum P(3) = 3.1e-22
Identities = 49/206 (23%), Positives = 78/206 (37%)
Query: 213 DVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASYSVNKVEQLIEPEKSGPSSGAES 272
DV + +KR V S L + LQ + + N S K I P G + AE
Sbjct: 603 DVAIKMNKRIVLLEFSLSSLAKRMKQLQHLKAQNKHELSYRKFRAKICP---GENQAAED 659
Query: 273 CMFLEQLSPDGNGCIEILNEQQISKGNTPKTVEVDTLHSDALEGLVHSSNENGKGNFT-L 331
+ +++S +EIL Q + G ++ D D H+++E K NF L
Sbjct: 660 EL-RKEISKSMFAEMEILG--QFNLGFIVTKLKEDLFLVDQ-----HAADE--KYNFEML 709
Query: 332 KAHDDKSADRLSKFNCMKLIGPHNVPTEENCPSPSRVMAKN-----ITEDGESDSRSRCI 386
+ H A RL + L + EN + KN I ED R++ I
Sbjct: 710 QQHTVLQAQRLITPQTLNLTAVNEAVLIENL----EIFRKNGFDFVIDEDAPVTERAKLI 765
Query: 387 QSSLNKFVTVSKRKYESIARPLTEMP 412
+K T + + + L++ P
Sbjct: 766 SLPTSKNWTFGPQDIDELIFMLSDSP 791
Score = 42 (19.8 bits), Expect = 8.9e-81, Sum P(5) = 8.9e-81
Identities = 14/71 (19%), Positives = 30/71 (42%)
Query: 351 IGPHNVPTEENCPSPSRVMAKNITEDGESDSRSRC-IQSSLNKFVTVSKRKYESIARPLT 409
+ P N + PS V +S S + + +NK + + + S+A+ +
Sbjct: 568 LSPTNAKRFKTEERPSNVNISQRLPGPQSTSAAEVDVAIKMNKRIVLLEFSLSSLAKRMK 627
Query: 410 EMPLLRNQSLH 420
++ L+ Q+ H
Sbjct: 628 QLQHLKAQNKH 638
Score = 37 (18.1 bits), Expect = 2.1e-62, Sum P(3) = 2.1e-62
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 564 SSCHTSGSVKMRRCF 578
S+CH S SV R F
Sbjct: 123 STCHGSASVGTRLVF 137
Score = 37 (18.1 bits), Expect = 2.1e-11, Sum P(3) = 2.1e-11
Identities = 9/36 (25%), Positives = 19/36 (52%)
Query: 718 TFGVEDVKDLISTLADNQGECSIISSYKMDTADSVC 753
T G +K+ I ++ + S+I ++ +D+VC
Sbjct: 217 TSGTSGMKENIGSVFGQKQLQSLIPFVQLPPSDAVC 252
>UNIPROTKB|Q755U7 [details] [associations]
symbol:AER421W "AER421Wp" species:284811 "Ashbya gossypii
ATCC 10895" [GO:0003697 "single-stranded DNA binding" evidence=IBA]
[GO:0006200 "ATP catabolic process" evidence=IBA] [GO:0006298
"mismatch repair" evidence=IBA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IBA] [GO:0016887 "ATPase activity"
evidence=IBA] [GO:0032300 "mismatch repair complex" evidence=IBA]
[GO:0032389 "MutLalpha complex" evidence=IBA] [GO:0032407
"MutSalpha complex binding" evidence=IBA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0016887
GO:GO:0006298 GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 EMBL:AE016818
GenomeReviews:AE016818_GR GO:GO:0032407 GO:GO:0032389
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
PANTHER:PTHR10073:SF9 KO:K10858 HOGENOM:HOG000165474 OMA:LDKPWNC
OrthoDB:EOG4FFH9B RefSeq:NP_985276.1 ProteinModelPortal:Q755U7
STRING:Q755U7 EnsemblFungi:AAS53100 GeneID:4621495
KEGG:ago:AGOS_AER421W PhylomeDB:Q755U7 Uniprot:Q755U7
Length = 903
Score = 453 (164.5 bits), Expect = 3.2e-77, Sum P(5) = 3.2e-77
Identities = 93/204 (45%), Positives = 131/204 (64%)
Query: 611 KEDFGRMKVIGQFNLGFII----GKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLR 666
K DF M +IGQFNLGFII + DLFIVDQHA+DEKYNFE L +STV N Q L++
Sbjct: 698 KRDFKEMSIIGQFNLGFIIVARRAENKHDLFIVDQHASDEKYNFENLQKSTVFNSQHLIK 757
Query: 667 PLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKD 726
PL ++L+ +E++ ++ + +KNGF + + G R L +P SK+ F +ED +
Sbjct: 758 PLTVELSVIDELLVLENLPLFKKNGFKIRVNEAQKQGSRIELTGMPTSKQTIFDIEDFYE 817
Query: 727 LISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILE 786
L+S L EC ++ +S+ S++R+M A RACR SIMIG L R M +++
Sbjct: 818 LLSLLK----ECDGVNK------NSIACSKIRSMFAMRACRMSIMIGKPLTRRTMTEVVR 867
Query: 787 HLADLNSPWNCPHGRPTMRHLVDL 810
L++L+ PWNCPHGRPTMRHL++L
Sbjct: 868 KLSELDKPWNCPHGRPTMRHLMEL 891
Score = 213 (80.0 bits), Expect = 3.2e-77, Sum P(5) = 3.2e-77
Identities = 41/91 (45%), Positives = 60/91 (65%)
Query: 149 VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQYPIAIMNFIVP 208
V G++S+ G GR+ DRQ+ ++N RPVD P+V K N++Y+ N+ QYP+ I+NF +
Sbjct: 263 VTGYISRASFGCGRSGKDRQFIYINKRPVDYPQVLKCCNDIYRSFNNVQYPVIILNFELS 322
Query: 209 TRACDVNVTPDKRKVFFSDECSILHALREGL 239
+ DVNVTPDKR V +E +L +L E L
Sbjct: 323 PQFVDVNVTPDKRTVLLHNEEYVLQSLAEKL 353
Score = 173 (66.0 bits), Expect = 3.2e-77, Sum P(5) = 3.2e-77
Identities = 38/69 (55%), Positives = 46/69 (66%)
Query: 9 SPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDN 68
S I IN+ VHRI +GQVI DL +AVKE+VENSLDA A +EI + YG E + DN
Sbjct: 2 SGKINAINQADVHRITSGQVIIDLVAAVKEVVENSLDAHADKLEITFRNYGLEAIECADN 61
Query: 69 GCGISPNNF 77
G GI +NF
Sbjct: 62 GDGIPDSNF 70
Score = 99 (39.9 bits), Expect = 3.2e-77, Sum P(5) = 3.2e-77
Identities = 24/69 (34%), Positives = 38/69 (55%)
Query: 76 NFKV---RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNI 132
NFK + V L Q+YAL+++ R N KS++L T G + + NI+TVFG +
Sbjct: 165 NFKKQFGKCVTLLQSYALLSENCRLSIFNVNAAGSKSLLLSTPGRNDISKNILTVFGSDG 224
Query: 133 YNCLEPVAI 141
+ L+ V +
Sbjct: 225 MHGLQKVGL 233
Score = 37 (18.1 bits), Expect = 3.2e-77, Sum P(5) = 3.2e-77
Identities = 23/91 (25%), Positives = 41/91 (45%)
Query: 459 NKADKVSKEIEN--ILSSEGNTNEKP----REE-LVTQEK-ATPLLNVPSIVSSSNDL-- 508
+K + + ++EN +L + TNE P RE L T++ A + + N
Sbjct: 518 SKTLEETAQLENNKLLFVQDPTNEDPSSPKRETYLTTRDMHARRDVGTEDELEPGNRTYA 577
Query: 509 KKNSEDLSVAASHLQFSGSILDAPVPSSSLD 539
+++ ED+S A+ L+F P S S +
Sbjct: 578 EESQEDMSDRAAPLEFMSDKKSRPCNSCSAE 608
>UNIPROTKB|I3L0B5 [details] [associations]
symbol:PMS2 "Mismatch repair endonuclease PMS2"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006298 "mismatch repair" evidence=IEA] [GO:0030983 "mismatched
DNA binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
Pfam:PF01119 Pfam:PF08676 SMART:SM00853 Prosite:PS00058
GO:GO:0005524 GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874
EMBL:AC005995 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 HGNC:HGNC:9122
ProteinModelPortal:I3L0B5 SMR:I3L0B5 Ensembl:ENST00000382322
Bgee:I3L0B5 Uniprot:I3L0B5
Length = 815
Score = 497 (180.0 bits), Expect = 4.2e-76, Sum P(5) = 4.2e-76
Identities = 104/207 (50%), Positives = 136/207 (65%)
Query: 611 KEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKL 670
K F M++IGQFNLGFII KL++D+FIVDQHA DEKYNFE L Q TVL Q L+ P L
Sbjct: 623 KTMFAEMEIIGQFNLGFIITKLNEDIFIVDQHATDEKYNFEMLQQHTVLQGQRLIAPQTL 682
Query: 671 DLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIST 730
+LT E V +++I RKNGF D +A R +L ++P SK TFG +DV +LI
Sbjct: 683 NLTAVNEAVLIENLEIFRKNGFDFVIDENAPVTERAKLISLPTSKNWTFGPQDVDELIFM 742
Query: 731 LADNQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLA 789
L+D+ G +C PSRV+ M ASRACR S+MIG AL +EM+K++ H+
Sbjct: 743 LSDSPGV--------------MCRPSRVKQMFASRACRKSVMIGTALNTSEMKKLITHMG 788
Query: 790 DLNSPWNCPHGRPTMRHLVDLTTIRKN 816
+++ PWNCPHGRPTMRH+ +L I +N
Sbjct: 789 EMDHPWNCPHGRPTMRHIANLGVISQN 815
Score = 216 (81.1 bits), Expect = 4.2e-76, Sum P(5) = 4.2e-76
Identities = 43/114 (37%), Positives = 69/114 (60%)
Query: 149 VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQYPIAIMNFIVP 208
+ GF+S+ G GR+ DRQ+FF+N RP D KV +LVNE+Y N QYP ++N V
Sbjct: 222 ISGFISQCTHGVGRSSTDRQFFFINRRPCDPAKVCRLVNEVYHMYNRHQYPFVVLNISVD 281
Query: 209 TRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASYSVNKVEQLIEPE 262
+ D+NVTPDKR++ +E +L L+ L ++ + +V++ + L++ E
Sbjct: 282 SECVDINVTPDKRQILLQEEKLLLAVLKTSLIGMFDSDVNKLNVSQ-QPLLDVE 334
Score = 115 (45.5 bits), Expect = 4.2e-76, Sum P(5) = 4.2e-76
Identities = 29/74 (39%), Positives = 42/74 (56%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP- 138
+ V + AY +I+ G+R CTN G+ + V+ T GS S+K+NI +VFG L P
Sbjct: 136 KMVQVLHAYCIISAGIRVSCTNQLGQGKRQPVVCTGGSPSIKENIGSVFGQKQLQSLIPF 195
Query: 139 VAICKSDS-CKVEG 151
V + SDS C+ G
Sbjct: 196 VQLPPSDSVCEEYG 209
Score = 76 (31.8 bits), Expect = 4.2e-76, Sum P(5) = 4.2e-76
Identities = 14/31 (45%), Positives = 19/31 (61%)
Query: 48 ATSIEIALKEYGEEWFQVVDNGCGISPNNFK 78
A S LK+YG + +V DNGCG+ NF+
Sbjct: 4 AESSRSKLKDYGVDLIEVSDNGCGVEEENFE 34
Score = 38 (18.4 bits), Expect = 4.2e-76, Sum P(5) = 4.2e-76
Identities = 11/46 (23%), Positives = 17/46 (36%)
Query: 460 KADKVSKEIENILSSEGNTNEKPREELVTQEKATPLLNVPSIVSSS 505
K D + S T KP + + +PL ++SSS
Sbjct: 365 KKDVSISRLREAFSLRHTTENKPHSPKTPEPRRSPLGQKRGMLSSS 410
>SGD|S000005026 [details] [associations]
symbol:PMS1 "ATP-binding protein involved in mismatch repair"
species:4932 "Saccharomyces cerevisiae" [GO:0016887 "ATPase
activity" evidence=IMP;IDA] [GO:0032389 "MutLalpha complex"
evidence=IEA;IPI] [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0000710 "meiotic mismatch repair" evidence=IMP] [GO:0006281
"DNA repair" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0032135 "DNA insertion or deletion
binding" evidence=IDA] [GO:0032139 "dinucleotide insertion or
deletion binding" evidence=IDA] [GO:0003697 "single-stranded DNA
binding" evidence=IDA] [GO:0003690 "double-stranded DNA binding"
evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA;IMP]
[GO:0006298 "mismatch repair" evidence=IEA;IMP] [GO:0000404 "loop
DNA binding" evidence=IDA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IBA] [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 InterPro:IPR015434
Pfam:PF01119 Pfam:PF02518 Pfam:PF08676 SMART:SM00387 SMART:SM00853
SGD:S000005026 Prosite:PS00058 GO:GO:0005524 GO:GO:0005737
EMBL:BK006947 GO:GO:0016887 Gene3D:3.30.565.10 SUPFAM:SSF55874
EMBL:DQ115393 GO:GO:0030983 EMBL:X86470 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
EMBL:X89016 eggNOG:COG0323 EMBL:AF458969 EMBL:AF458971
EMBL:AF458973 EMBL:AF458974 EMBL:AF458976 EMBL:AF458977 KO:K14561
RefSeq:NP_014324.3 GeneID:855649 KEGG:sce:YNL075W GO:GO:0032389
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
GO:GO:0000710 PANTHER:PTHR10073:SF9 KO:K10858 OMA:LDKPWNC
OrthoDB:EOG4FFH9B EMBL:M29688 EMBL:DQ356628 EMBL:DQ356629
EMBL:DQ356630 EMBL:DQ356631 EMBL:DQ356632 EMBL:Z71357 EMBL:Z71358
PIR:S53896 RefSeq:NP_014317.4 PDB:3H4L PDBsum:3H4L
ProteinModelPortal:P14242 SMR:P14242 DIP:DIP-2416N IntAct:P14242
MINT:MINT-625253 STRING:P14242 PaxDb:P14242 PeptideAtlas:P14242
EnsemblFungi:YNL082W GeneID:855642 KEGG:sce:YNL082W CYGD:YNL082w
GeneTree:ENSGT00530000063289 EvolutionaryTrace:P14242
NextBio:979872 Genevestigator:P14242 GermOnline:YNL082W
Uniprot:P14242
Length = 873
Score = 435 (158.2 bits), Expect = 1.7e-74, Sum P(5) = 1.7e-74
Identities = 92/204 (45%), Positives = 131/204 (64%)
Query: 611 KEDFGRMKVIGQFNLGFII--GKLDQ--DLFIVDQHAADEKYNFERLSQSTVLNQQPLLR 666
K DF +M+V+GQFNLGFII K+D DLFIVDQHA+DEKYNFE L TV Q L+
Sbjct: 668 KNDFKKMEVVGQFNLGFIIVTRKVDNKYDLFIVDQHASDEKYNFETLQAVTVFKSQKLII 727
Query: 667 PLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKD 726
P ++L+ +E+V ++ + KNGF L+ D G R +L ++P SK+ F + D +
Sbjct: 728 PQPVELSVIDELVVLDNLPVFEKNGFKLKIDEEEEFGSRVKLLSLPTSKQTLFDLGDFNE 787
Query: 727 LISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILE 786
LI + ++ G D++ S++R+M A RACRSSIMIG L + M +++
Sbjct: 788 LIHLIKEDGGL----------RRDNIRCSKIRSMFAMRACRSSIMIGKPLNKKTMTRVVH 837
Query: 787 HLADLNSPWNCPHGRPTMRHLVDL 810
+L++L+ PWNCPHGRPTMRHL++L
Sbjct: 838 NLSELDKPWNCPHGRPTMRHLMEL 861
Score = 198 (74.8 bits), Expect = 1.7e-74, Sum P(5) = 1.7e-74
Identities = 37/97 (38%), Positives = 59/97 (60%)
Query: 148 KVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQYPIAIMNFIV 207
+V+G++S+ G GRN DRQ+ +VN RPV+ + K NE+YK N+ Q+P +N +
Sbjct: 261 RVKGYISQNSFGCGRNSKDRQFIYVNKRPVEYSTLLKCCNEVYKTFNNVQFPAVFLNLEL 320
Query: 208 PTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYS 244
P DVNVTPDKR + +E +++ + L + Y+
Sbjct: 321 PMSLIDVNVTPDKRVILLHNERAVIDIFKTTLSDYYN 357
Score = 185 (70.2 bits), Expect = 1.7e-74, Sum P(5) = 1.7e-74
Identities = 39/71 (54%), Positives = 50/71 (70%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I IN VHRI +GQVI DL++AVKELV+NS+DA A IEI K+YG E + DNG G
Sbjct: 4 IHQINDIDVHRITSGQVITDLTTAVKELVDNSIDANANQIEIIFKDYGLESIECSDNGDG 63
Query: 72 ISPNNFKVRAV 82
I P+N++ A+
Sbjct: 64 IDPSNYEFLAL 74
Score = 94 (38.1 bits), Expect = 1.7e-74, Sum P(5) = 1.7e-74
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
+ + + Q YA+I ++F N T K K+++L T +SS++ NI +VFG LE V
Sbjct: 171 KCLTVIQGYAIINAAIKFSVWNITPKGKKNLILSTMRNSSMRKNISSVFGAGGMRGLEEV 230
Score = 44 (20.5 bits), Expect = 2.1e-52, Sum P(3) = 2.1e-52
Identities = 15/44 (34%), Positives = 24/44 (54%)
Query: 447 IAKLNKIEPFKCNKADKVSKEIENILSSEGNTNE-KPREELVTQ 489
IAKL+ I KADK+ ++ ++S+ T+ K LV+Q
Sbjct: 106 IAKLSVITTTSPPKADKLEYDMVGHITSKTTTSRNKGTTVLVSQ 149
Score = 39 (18.8 bits), Expect = 1.7e-74, Sum P(5) = 1.7e-74
Identities = 15/63 (23%), Positives = 29/63 (46%)
Query: 291 NEQQISKGNTPKTVEVDTLHSDALEGLVHSSNE-----NGKGNFTLKA--HDDKSADRLS 343
N ++ISK + + S+A E ++ + +E G+ TL +D K + +
Sbjct: 619 NFKEISKNGKQMSSIISKRKSEAQENIIKNKDELEDFEQGEKYLTLTVSKNDFKKMEVVG 678
Query: 344 KFN 346
+FN
Sbjct: 679 QFN 681
Score = 39 (18.8 bits), Expect = 2.5e-30, Sum P(4) = 2.5e-30
Identities = 33/150 (22%), Positives = 63/150 (42%)
Query: 319 HSSNENGKGNF-TLKAHDDKSADRLSKFNCMKLIGPHNVPTEENCPSPSRVMAK-NITED 376
H+S+E K NF TL+A + +L ++L + +N P + K I E+
Sbjct: 703 HASDE--KYNFETLQAVTVFKSQKLIIPQPVELSVIDELVVLDNLPVFEKNGFKLKIDEE 760
Query: 377 GESDSRSRCIQSSLNKFVTVSKRKYESIARPLTEMPLLRNQSLHCQMKKSNSDMDAVDTR 436
E SR + + +K + + + E LR ++ C +S M A +
Sbjct: 761 EEFGSRVKLLSLPTSKQTLFDLGDFNELIHLIKEDGGLRRDNIRCSKIRSMFAMRACRSS 820
Query: 437 ----SPVRR----HLVDDIAKLNKIEPFKC 458
P+ + +V ++++L+K P+ C
Sbjct: 821 IMIGKPLNKKTMTRVVHNLSELDK--PWNC 848
Score = 38 (18.4 bits), Expect = 2.1e-74, Sum P(5) = 2.1e-74
Identities = 10/41 (24%), Positives = 19/41 (46%)
Query: 468 IENILSSEGNTNEKPREELVTQEKATPLLNVPSIVSSSNDL 508
+ +++ SE + L +TP +PSI + S +L
Sbjct: 439 VTDVIGSECEVSVDSSVVLDEGNSSTPTKKLPSIKTDSQNL 479
Score = 38 (18.4 bits), Expect = 3.1e-30, Sum P(4) = 3.1e-30
Identities = 38/186 (20%), Positives = 70/186 (37%)
Query: 299 NTPKTVEVDTLHSDALEGLVHSSNENGKGNFTLKAHDDKSADRLSKFNCMKLIGPHNVPT 358
N+ K++ D S + +GL H E+ + L + K + K +I
Sbjct: 584 NSRKSISKDNYRSLS-DGLTHRKFEDEILEYNLSTKNFKEISKNGK-QMSSIISKRKSEA 641
Query: 359 EENCPSPSRVMAKNITEDGESDSRSRCIQSSLNKFVTVS-----KRKYESIARPLTEMPL 413
+EN + K+ ED E + + S N F + + + R +
Sbjct: 642 QENI-----IKNKDELEDFEQGEKYLTLTVSKNDFKKMEVVGQFNLGFIIVTRKVDNKYD 696
Query: 414 LRNQSLHCQMKKSNSD-MDAVDT-RS-------PVRRHLVDDIAKLNKIEPFKCNKAD-K 463
L H +K N + + AV +S PV ++D++ L+ + F+ N K
Sbjct: 697 LFIVDQHASDEKYNFETLQAVTVFKSQKLIIPQPVELSVIDELVVLDNLPVFEKNGFKLK 756
Query: 464 VSKEIE 469
+ +E E
Sbjct: 757 IDEEEE 762
>UNIPROTKB|C9J167 [details] [associations]
symbol:PMS2 "Mismatch repair endonuclease PMS2"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006298 "mismatch repair" evidence=IEA] [GO:0030983 "mismatched
DNA binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676
SMART:SM00853 GO:GO:0005524 GO:GO:0006298 Gene3D:3.30.565.10
SUPFAM:SSF55874 EMBL:AC005995 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
PANTHER:PTHR10073 HOGENOM:HOG000165474 HGNC:HGNC:9122
IPI:IPI00604708 ProteinModelPortal:C9J167 SMR:C9J167 STRING:C9J167
Ensembl:ENST00000441476 UCSC:uc003spj.3 ArrayExpress:C9J167
Bgee:C9J167 Uniprot:C9J167
Length = 756
Score = 497 (180.0 bits), Expect = 2.1e-72, Sum P(4) = 2.1e-72
Identities = 104/207 (50%), Positives = 136/207 (65%)
Query: 611 KEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKL 670
K F M++IGQFNLGFII KL++D+FIVDQHA DEKYNFE L Q TVL Q L+ P L
Sbjct: 564 KTMFAEMEIIGQFNLGFIITKLNEDIFIVDQHATDEKYNFEMLQQHTVLQGQRLIAPQTL 623
Query: 671 DLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIST 730
+LT E V +++I RKNGF D +A R +L ++P SK TFG +DV +LI
Sbjct: 624 NLTAVNEAVLIENLEIFRKNGFDFVIDENAPVTERAKLISLPTSKNWTFGPQDVDELIFM 683
Query: 731 LADNQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLA 789
L+D+ G +C PSRV+ M ASRACR S+MIG AL +EM+K++ H+
Sbjct: 684 LSDSPGV--------------MCRPSRVKQMFASRACRKSVMIGTALNTSEMKKLITHMG 729
Query: 790 DLNSPWNCPHGRPTMRHLVDLTTIRKN 816
+++ PWNCPHGRPTMRH+ +L I +N
Sbjct: 730 EMDHPWNCPHGRPTMRHIANLGVISQN 756
Score = 216 (81.1 bits), Expect = 2.1e-72, Sum P(4) = 2.1e-72
Identities = 43/114 (37%), Positives = 69/114 (60%)
Query: 149 VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQYPIAIMNFIVP 208
+ GF+S+ G GR+ DRQ+FF+N RP D KV +LVNE+Y N QYP ++N V
Sbjct: 163 ISGFISQCTHGVGRSSTDRQFFFINRRPCDPAKVCRLVNEVYHMYNRHQYPFVVLNISVD 222
Query: 209 TRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASYSVNKVEQLIEPE 262
+ D+NVTPDKR++ +E +L L+ L ++ + +V++ + L++ E
Sbjct: 223 SECVDINVTPDKRQILLQEEKLLLAVLKTSLIGMFDSDVNKLNVSQ-QPLLDVE 275
Score = 115 (45.5 bits), Expect = 2.1e-72, Sum P(4) = 2.1e-72
Identities = 29/74 (39%), Positives = 42/74 (56%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP- 138
+ V + AY +I+ G+R CTN G+ + V+ T GS S+K+NI +VFG L P
Sbjct: 77 KMVQVLHAYCIISAGIRVSCTNQLGQGKRQPVVCTGGSPSIKENIGSVFGQKQLQSLIPF 136
Query: 139 VAICKSDS-CKVEG 151
V + SDS C+ G
Sbjct: 137 VQLPPSDSVCEEYG 150
Score = 48 (22.0 bits), Expect = 8.1e-46, Sum P(2) = 8.1e-46
Identities = 11/28 (39%), Positives = 17/28 (60%)
Query: 552 RKRRQQRLS-IMQSSCHTSGSVKMRRCF 578
R+R+ +RL+ + S+CH S V R F
Sbjct: 4 RRRKLRRLNDVTISTCHASAKVGTRLMF 31
Score = 38 (18.4 bits), Expect = 2.1e-72, Sum P(4) = 2.1e-72
Identities = 11/46 (23%), Positives = 17/46 (36%)
Query: 460 KADKVSKEIENILSSEGNTNEKPREELVTQEKATPLLNVPSIVSSS 505
K D + S T KP + + +PL ++SSS
Sbjct: 306 KKDVSISRLREAFSLRHTTENKPHSPKTPEPRRSPLGQKRGMLSSS 351
>DICTYBASE|DDB_G0283981 [details] [associations]
symbol:pms1 "MutL DNA mismatch repair protein"
species:44689 "Dictyostelium discoideum" [GO:0032389 "MutLalpha
complex" evidence=IEA;IBA] [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA;ISS;IBA]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0016887 "ATPase
activity" evidence=ISS;IBA] [GO:0006200 "ATP catabolic process"
evidence=ISS;IBA] [GO:0003677 "DNA binding" evidence=ISS]
[GO:0032407 "MutSalpha complex binding" evidence=IBA] [GO:0032300
"mismatch repair complex" evidence=IBA] [GO:0007131 "reciprocal
meiotic recombination" evidence=IBA] [GO:0003697 "single-stranded
DNA binding" evidence=IBA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 dictyBase:DDB_G0283981 Prosite:PS00058 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 EMBL:AAFI02000058 eggNOG:COG0323 GO:GO:0032389
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
PANTHER:PTHR10073:SF9 HSSP:P54278 RefSeq:XP_638844.1
ProteinModelPortal:Q54QA0 STRING:Q54QA0 EnsemblProtists:DDB0232417
GeneID:8624368 KEGG:ddi:DDB_G0283981 KO:K10858 OMA:TINECED
ProtClustDB:CLSZ2846737 Uniprot:Q54QA0
Length = 1022
Score = 460 (167.0 bits), Expect = 4.0e-71, Sum P(3) = 4.0e-71
Identities = 102/206 (49%), Positives = 135/206 (65%)
Query: 609 FRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQS--TVLNQQPLLR 666
F+KE F +M VIGQFNLGFII KL DLFI+DQHAADEKYNFE LS+S + +N QPLL+
Sbjct: 806 FKKEYFKQMIVIGQFNLGFIIAKLGNDLFIIDQHAADEKYNFEILSKSVESSINSQPLLK 865
Query: 667 PLKL-DLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVK 725
P L DLT EEE++ ++D+ +KNGF D A + +L A P +FG++D+
Sbjct: 866 PDTLSDLTSEEELIIIENVDLFKKNGFKFIIDHDAPTRFKIKLSAFPIIHGQSFGIKDIY 925
Query: 726 DLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKIL 785
+ I + E SI S P R+ ++LAS+ACR SIM+G L EM+ +L
Sbjct: 926 EWIFMIK----ESSIPGSVNK------IP-RLNSLLASKACRKSIMVGTTLTHKEMKDVL 974
Query: 786 EHLADLNSPWNCPHGRPTMRHLVDLT 811
+L+ L++PW CPHGRPTMRHLVDL+
Sbjct: 975 NNLSTLDNPWCCPHGRPTMRHLVDLS 1000
Score = 229 (85.7 bits), Expect = 4.0e-71, Sum P(3) = 4.0e-71
Identities = 42/66 (63%), Positives = 56/66 (84%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ I+K ++ IC+GQVI DLS AVKEL+ENS+DAGAT++EI LKEYGEE+ +V+DNG G
Sbjct: 2 IKAIDKESINNICSGQVIFDLSIAVKELIENSIDAGATTVEIRLKEYGEEFIEVIDNGSG 61
Query: 72 ISPNNF 77
+ P+NF
Sbjct: 62 VEPSNF 67
Score = 156 (60.0 bits), Expect = 4.0e-71, Sum P(3) = 4.0e-71
Identities = 92/418 (22%), Positives = 167/418 (39%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICK 143
+ QAYALI+ R C N GK+ +S VL T S+++DN+I VFG + L+
Sbjct: 174 ILQAYALISTNTRITCYNQAGKSPRSCVLSTTSGSTIRDNLINVFGTKMSQSLDEFTA-- 231
Query: 144 SDSC-KVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQYPIAI 202
SDS KV G +SK G GSG N S+L + ++S+ ++I
Sbjct: 232 SDSLFKVNGLISKIGIGSGTGQS-----ISNSSSSSSQSSSQLSSSSSSSSSSQSSQLSI 286
Query: 203 MNFIVPTRACDVNVTPDKRKVFFSDECSILHA-LREGLQEIYSP--NNASYSV------- 252
+ +R+C D R+ FF + H+ L + + +Y SY V
Sbjct: 287 GSL---SRSC-----AD-RQFFFVNSRPFEHSKLAKEINSLYQSFHKRGSYPVVIFNIEM 337
Query: 253 --NKVEQLIEPEKSGPSSGAESCMFLEQLSPDGNGCIEILNEQQISKGNTPKTVEVDTLH 310
N + + P+K E + L L DG + + + D
Sbjct: 338 PTNNYDVNVTPDKRTIFIQKEQQLLL--LITDGLKTMWETAQSVFDTNQLGQFTFNDENE 395
Query: 311 SDALEGLVHSSNENGKGNFTLKAHDDKSADRLSKFNCMKLIGPHNVPTEENCPSPSRVMA 370
+D S + +TLK +D++ ++++ +K + N PS ++ +
Sbjct: 396 NDNSNNNKQSKISSFPNLYTLKTEEDENNNKIT--TPIKKHSTTTTTSSLNSPSSNKKSS 453
Query: 371 KNITEDGESDS---RSRCIQSSLNKF-VT----VSKRKYESIARPLTEMPLLRNQSLHCQ 422
+ + S++ R+ + + F +T + + KY+ + P L ++ +
Sbjct: 454 NSTSSSSSSNNKNNRNNLEEDGDDSFDITDQQPLKRAKYDGNYNNSNKKPELP-KTPYPN 512
Query: 423 MKKSNSDMDAVDTRSPVRRHLVDDIAKL-NKIEPFKCNKADKVSKEIENILSSEGNTN 479
KK+N + D + + + ++ K N N D + + E I S GN++
Sbjct: 513 KKKNNENEDEDEDEDNYVQPVFSNVNKSKNSSNSGSSNSLDDIIDDNEFISRSNGNSS 570
>UNIPROTKB|F1NQJ3 [details] [associations]
symbol:Gga.22468 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006298
"mismatch repair" evidence=IEA] [GO:0030983 "mismatched DNA
binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
Pfam:PF01119 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0006298 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 GeneTree:ENSGT00530000063289
EMBL:AADN02023908 EMBL:AADN02023909 IPI:IPI00604396
Ensembl:ENSGALT00000005427 ArrayExpress:F1NQJ3 Uniprot:F1NQJ3
Length = 858
Score = 408 (148.7 bits), Expect = 6.0e-71, Sum P(3) = 6.0e-71
Identities = 87/181 (48%), Positives = 112/181 (61%)
Query: 634 QDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFS 693
+DLFI+DQHA DEKYNFE L Q TVL Q L+ P L+LT E V +++I RKNGF
Sbjct: 691 EDLFIIDQHATDEKYNFEMLQQHTVLQGQKLIAPQNLNLTAVNETVLIENLEIFRKNGFD 750
Query: 694 LEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVC 753
+ +A R +L ++P SK TFG +D+ +LI L+D G +C
Sbjct: 751 FVINENAPVTQRVKLISLPTSKNWTFGPQDIDELIFMLSDCPGV--------------MC 796
Query: 754 -PSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTT 812
PSRVR M ASRACR S+MIG AL EM+K++ H+ ++ PWNCPHGRPTMRH+ L
Sbjct: 797 RPSRVRQMFASRACRKSVMIGTALNVQEMKKLVTHMGEIEHPWNCPHGRPTMRHIASLDL 856
Query: 813 I 813
I
Sbjct: 857 I 857
Score = 232 (86.7 bits), Expect = 6.0e-71, Sum P(3) = 6.0e-71
Identities = 57/162 (35%), Positives = 85/162 (52%)
Query: 98 VCTNTTGKNVKSVVLKTQGSSSLKDNIITV-FGMNIYNCLEPVAICKSDSCK----VEGF 152
V + T G N+K + G L+ I V N C E + +D + + GF
Sbjct: 206 VVSTTGGPNLKENIGAVFGKKQLQSLIPFVQLPPNEAVC-EEYGLKSTDLPEKLYSITGF 264
Query: 153 LSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRAC 212
+S+ G GR+ DRQ+FF+N RP D KV KLVNE+Y N QYP ++N V +
Sbjct: 265 ISRCDHGVGRSTTDRQFFFINQRPCDPAKVVKLVNEVYHLYNKHQYPFIVLNICVDSECV 324
Query: 213 DVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASYSVNK 254
D+NVTPDKR++ +E +L L+ L E++ + +VN+
Sbjct: 325 DINVTPDKRQILLQEEKLLLAILKTSLIEMFGSDVNKLNVNQ 366
Score = 204 (76.9 bits), Expect = 6.0e-71, Sum P(3) = 6.0e-71
Identities = 39/68 (57%), Positives = 53/68 (77%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
TI+ I++ VHRIC+GQV+ L +AVKELVENSLDAGAT+I++ LK++G E +V DNG
Sbjct: 6 TIKRIDRESVHRICSGQVVLSLGTAVKELVENSLDAGATNIDVRLKDHGAELIEVSDNGG 65
Query: 71 GISPNNFK 78
G+ NF+
Sbjct: 66 GVEEENFE 73
Score = 99 (39.9 bits), Expect = 5.1e-57, Sum P(3) = 5.1e-57
Identities = 26/72 (36%), Positives = 40/72 (55%)
Query: 85 CQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP-VAICK 143
C+ + ++ +GVR CTN G+ KS V+ T G +LK+NI VFG L P V +
Sbjct: 181 CK-HTVLFQGVRINCTNQVGQGKKSPVVSTTGGPNLKENIGAVFGKKQLQSLIPFVQLPP 239
Query: 144 SDS-CKVEGFLS 154
+++ C+ G S
Sbjct: 240 NEAVCEEYGLKS 251
>ASPGD|ASPL0000093218 [details] [associations]
symbol:AN11853 species:162425 "Emericella nidulans"
[GO:0032389 "MutLalpha complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0032139 "dinucleotide insertion or
deletion binding" evidence=IEA] [GO:0003697 "single-stranded DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000404 "loop DNA binding" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IEA] [GO:0000710 "meiotic mismatch repair"
evidence=IEA] [GO:0043570 "maintenance of DNA repeat elements"
evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0016887
GO:GO:0006298 EMBL:AACD01000107 EMBL:BN001301 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 InterPro:IPR009395 Pfam:PF06320 eggNOG:COG0323
GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9 KO:K10858
HOGENOM:HOG000165474 OrthoDB:EOG4FFH9B RefSeq:XP_663920.1
ProteinModelPortal:Q5AZG4 STRING:Q5AZG4
EnsemblFungi:CADANIAT00006671 GeneID:2870963 KEGG:ani:AN6316.2
OMA:SDFAKMK Uniprot:Q5AZG4
Length = 1228
Score = 409 (149.0 bits), Expect = 6.4e-71, Sum P(4) = 6.4e-71
Identities = 93/220 (42%), Positives = 131/220 (59%)
Query: 611 KEDFGRMKVIGQFNLGFIIG--------KLDQD----------LFIVDQHAADEKYNFER 652
K+DF RM++ GQFNLGFI+ + + D LFI+DQHA+DEK NFER
Sbjct: 750 KDDFARMRIHGQFNLGFILASRTTSTSHRAESDPASGLGFKDELFIIDQHASDEKINFER 809
Query: 653 LSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHA--LAGLRFRLKA 710
L +T + Q L+ P +LDLT EE + + I+ KNGF ++ D G R L +
Sbjct: 810 LQSTTTVQNQRLVHPKRLDLTAVEEEIVIENQVILEKNGFVVDVDDSGDKPIGQRCSLLS 869
Query: 711 VPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSI 770
+P SK++ F V D+++LI+ L E S ++ + D PS+VR M A RACRSSI
Sbjct: 870 LPLSKEVVFDVRDLEELIAILT----ETSTPNTTGPEI-DIPRPSKVRKMFAMRACRSSI 924
Query: 771 MIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
MIG L + +M++++ + ++ PWNCPHGRPTMRHL L
Sbjct: 925 MIGKTLTQRQMERVVRDMGTIDKPWNCPHGRPTMRHLFSL 964
Score = 277 (102.6 bits), Expect = 6.4e-71, Sum P(4) = 6.4e-71
Identities = 66/175 (37%), Positives = 94/175 (53%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCL------- 136
L AYA I+ GVRF NT K VV T G+ + K+NI V+G L
Sbjct: 172 LLHAYACISTGVRFTIKNTQAKKTV-VVFATNGNPTTKENIANVYGAKTLLALIPLDLEL 230
Query: 137 --EP------VAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNE 188
EP +A K + +V G +S+P G GR DRQ FVN RP LP+++K +NE
Sbjct: 231 QFEPSVAETMMAGDKKSNIQVRGHISRPVFGEGRQTPDRQMLFVNSRPCALPQITKAINE 290
Query: 189 LYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIY 243
+YK N Q P +F + T A DVNV+PDKR + D +++ +L++ LQ+++
Sbjct: 291 VYKSFNLAQSPFVFADFHMDTNAYDVNVSPDKRTILLHDAGALIESLKQSLQKLF 345
Score = 165 (63.1 bits), Expect = 6.4e-71, Sum P(4) = 6.4e-71
Identities = 32/54 (59%), Positives = 42/54 (77%)
Query: 25 AGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFK 78
+GQVI DL+S +KELVENSLDAGATSIE+ + G + +V DNG GI+P N++
Sbjct: 12 SGQVIVDLTSVIKELVENSLDAGATSIEVRFRNSGLDLIEVQDNGSGIAPENYE 65
Score = 47 (21.6 bits), Expect = 5.2e-47, Sum P(4) = 5.2e-47
Identities = 9/35 (25%), Positives = 18/35 (51%)
Query: 217 TPDKRKVFFSDECSILHALREGLQEIYSPNNASYS 251
TPD++ +F + L + + + E+Y N + S
Sbjct: 266 TPDRQMLFVNSRPCALPQITKAINEVYKSFNLAQS 300
Score = 46 (21.3 bits), Expect = 6.4e-71, Sum P(4) = 6.4e-71
Identities = 26/101 (25%), Positives = 44/101 (43%)
Query: 398 KRKYESIARPLTEMPLLRNQSLHCQMKKSNSDMDAVDTRSPVRRHLVDDI-AKLNKIEPF 456
KR+ ++ + L E NQ+ + ++N V R HL I A L++IE
Sbjct: 654 KRREDAEVQRLIEEAGKANQAN--SISRANKLHKGVSYRDSTV-HLATAINASLSRIESQ 710
Query: 457 KCNKADKVSKEIENILSSEGNTNEKPREELVTQEKATPLLN 497
D S+ N+ SSE +E ++ +E+ T +N
Sbjct: 711 AKYIHDSHSRR--NLSSSEDELDESRLSQVAPEERLTLTVN 749
>ASPGD|ASPL0000095187 [details] [associations]
symbol:AN11854 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0016887
GO:GO:0006298 EMBL:AACD01000107 EMBL:BN001301 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 InterPro:IPR009395 Pfam:PF06320 eggNOG:COG0323
GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9 KO:K10858
HOGENOM:HOG000165474 OrthoDB:EOG4FFH9B RefSeq:XP_663920.1
ProteinModelPortal:Q5AZG4 STRING:Q5AZG4
EnsemblFungi:CADANIAT00006671 GeneID:2870963 KEGG:ani:AN6316.2
OMA:SDFAKMK Uniprot:Q5AZG4
Length = 1228
Score = 409 (149.0 bits), Expect = 6.4e-71, Sum P(4) = 6.4e-71
Identities = 93/220 (42%), Positives = 131/220 (59%)
Query: 611 KEDFGRMKVIGQFNLGFIIG--------KLDQD----------LFIVDQHAADEKYNFER 652
K+DF RM++ GQFNLGFI+ + + D LFI+DQHA+DEK NFER
Sbjct: 750 KDDFARMRIHGQFNLGFILASRTTSTSHRAESDPASGLGFKDELFIIDQHASDEKINFER 809
Query: 653 LSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHA--LAGLRFRLKA 710
L +T + Q L+ P +LDLT EE + + I+ KNGF ++ D G R L +
Sbjct: 810 LQSTTTVQNQRLVHPKRLDLTAVEEEIVIENQVILEKNGFVVDVDDSGDKPIGQRCSLLS 869
Query: 711 VPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSI 770
+P SK++ F V D+++LI+ L E S ++ + D PS+VR M A RACRSSI
Sbjct: 870 LPLSKEVVFDVRDLEELIAILT----ETSTPNTTGPEI-DIPRPSKVRKMFAMRACRSSI 924
Query: 771 MIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
MIG L + +M++++ + ++ PWNCPHGRPTMRHL L
Sbjct: 925 MIGKTLTQRQMERVVRDMGTIDKPWNCPHGRPTMRHLFSL 964
Score = 277 (102.6 bits), Expect = 6.4e-71, Sum P(4) = 6.4e-71
Identities = 66/175 (37%), Positives = 94/175 (53%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCL------- 136
L AYA I+ GVRF NT K VV T G+ + K+NI V+G L
Sbjct: 172 LLHAYACISTGVRFTIKNTQAKKTV-VVFATNGNPTTKENIANVYGAKTLLALIPLDLEL 230
Query: 137 --EP------VAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNE 188
EP +A K + +V G +S+P G GR DRQ FVN RP LP+++K +NE
Sbjct: 231 QFEPSVAETMMAGDKKSNIQVRGHISRPVFGEGRQTPDRQMLFVNSRPCALPQITKAINE 290
Query: 189 LYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIY 243
+YK N Q P +F + T A DVNV+PDKR + D +++ +L++ LQ+++
Sbjct: 291 VYKSFNLAQSPFVFADFHMDTNAYDVNVSPDKRTILLHDAGALIESLKQSLQKLF 345
Score = 165 (63.1 bits), Expect = 6.4e-71, Sum P(4) = 6.4e-71
Identities = 32/54 (59%), Positives = 42/54 (77%)
Query: 25 AGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFK 78
+GQVI DL+S +KELVENSLDAGATSIE+ + G + +V DNG GI+P N++
Sbjct: 12 SGQVIVDLTSVIKELVENSLDAGATSIEVRFRNSGLDLIEVQDNGSGIAPENYE 65
Score = 47 (21.6 bits), Expect = 5.2e-47, Sum P(4) = 5.2e-47
Identities = 9/35 (25%), Positives = 18/35 (51%)
Query: 217 TPDKRKVFFSDECSILHALREGLQEIYSPNNASYS 251
TPD++ +F + L + + + E+Y N + S
Sbjct: 266 TPDRQMLFVNSRPCALPQITKAINEVYKSFNLAQS 300
Score = 46 (21.3 bits), Expect = 6.4e-71, Sum P(4) = 6.4e-71
Identities = 26/101 (25%), Positives = 44/101 (43%)
Query: 398 KRKYESIARPLTEMPLLRNQSLHCQMKKSNSDMDAVDTRSPVRRHLVDDI-AKLNKIEPF 456
KR+ ++ + L E NQ+ + ++N V R HL I A L++IE
Sbjct: 654 KRREDAEVQRLIEEAGKANQAN--SISRANKLHKGVSYRDSTV-HLATAINASLSRIESQ 710
Query: 457 KCNKADKVSKEIENILSSEGNTNEKPREELVTQEKATPLLN 497
D S+ N+ SSE +E ++ +E+ T +N
Sbjct: 711 AKYIHDSHSRR--NLSSSEDELDESRLSQVAPEERLTLTVN 749
>UNIPROTKB|Q5AZG4 [details] [associations]
symbol:AN6316.2 "ATP-binding protein (Eurofung)"
species:227321 "Aspergillus nidulans FGSC A4" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032407 "MutSalpha complex
binding" evidence=IBA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0016887
GO:GO:0006298 EMBL:AACD01000107 EMBL:BN001301 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 InterPro:IPR009395 Pfam:PF06320 eggNOG:COG0323
GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9 KO:K10858
HOGENOM:HOG000165474 OrthoDB:EOG4FFH9B RefSeq:XP_663920.1
ProteinModelPortal:Q5AZG4 STRING:Q5AZG4
EnsemblFungi:CADANIAT00006671 GeneID:2870963 KEGG:ani:AN6316.2
OMA:SDFAKMK Uniprot:Q5AZG4
Length = 1228
Score = 409 (149.0 bits), Expect = 6.4e-71, Sum P(4) = 6.4e-71
Identities = 93/220 (42%), Positives = 131/220 (59%)
Query: 611 KEDFGRMKVIGQFNLGFIIG--------KLDQD----------LFIVDQHAADEKYNFER 652
K+DF RM++ GQFNLGFI+ + + D LFI+DQHA+DEK NFER
Sbjct: 750 KDDFARMRIHGQFNLGFILASRTTSTSHRAESDPASGLGFKDELFIIDQHASDEKINFER 809
Query: 653 LSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHA--LAGLRFRLKA 710
L +T + Q L+ P +LDLT EE + + I+ KNGF ++ D G R L +
Sbjct: 810 LQSTTTVQNQRLVHPKRLDLTAVEEEIVIENQVILEKNGFVVDVDDSGDKPIGQRCSLLS 869
Query: 711 VPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSI 770
+P SK++ F V D+++LI+ L E S ++ + D PS+VR M A RACRSSI
Sbjct: 870 LPLSKEVVFDVRDLEELIAILT----ETSTPNTTGPEI-DIPRPSKVRKMFAMRACRSSI 924
Query: 771 MIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
MIG L + +M++++ + ++ PWNCPHGRPTMRHL L
Sbjct: 925 MIGKTLTQRQMERVVRDMGTIDKPWNCPHGRPTMRHLFSL 964
Score = 277 (102.6 bits), Expect = 6.4e-71, Sum P(4) = 6.4e-71
Identities = 66/175 (37%), Positives = 94/175 (53%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCL------- 136
L AYA I+ GVRF NT K VV T G+ + K+NI V+G L
Sbjct: 172 LLHAYACISTGVRFTIKNTQAKKTV-VVFATNGNPTTKENIANVYGAKTLLALIPLDLEL 230
Query: 137 --EP------VAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNE 188
EP +A K + +V G +S+P G GR DRQ FVN RP LP+++K +NE
Sbjct: 231 QFEPSVAETMMAGDKKSNIQVRGHISRPVFGEGRQTPDRQMLFVNSRPCALPQITKAINE 290
Query: 189 LYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIY 243
+YK N Q P +F + T A DVNV+PDKR + D +++ +L++ LQ+++
Sbjct: 291 VYKSFNLAQSPFVFADFHMDTNAYDVNVSPDKRTILLHDAGALIESLKQSLQKLF 345
Score = 165 (63.1 bits), Expect = 6.4e-71, Sum P(4) = 6.4e-71
Identities = 32/54 (59%), Positives = 42/54 (77%)
Query: 25 AGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFK 78
+GQVI DL+S +KELVENSLDAGATSIE+ + G + +V DNG GI+P N++
Sbjct: 12 SGQVIVDLTSVIKELVENSLDAGATSIEVRFRNSGLDLIEVQDNGSGIAPENYE 65
Score = 47 (21.6 bits), Expect = 5.2e-47, Sum P(4) = 5.2e-47
Identities = 9/35 (25%), Positives = 18/35 (51%)
Query: 217 TPDKRKVFFSDECSILHALREGLQEIYSPNNASYS 251
TPD++ +F + L + + + E+Y N + S
Sbjct: 266 TPDRQMLFVNSRPCALPQITKAINEVYKSFNLAQS 300
Score = 46 (21.3 bits), Expect = 6.4e-71, Sum P(4) = 6.4e-71
Identities = 26/101 (25%), Positives = 44/101 (43%)
Query: 398 KRKYESIARPLTEMPLLRNQSLHCQMKKSNSDMDAVDTRSPVRRHLVDDI-AKLNKIEPF 456
KR+ ++ + L E NQ+ + ++N V R HL I A L++IE
Sbjct: 654 KRREDAEVQRLIEEAGKANQAN--SISRANKLHKGVSYRDSTV-HLATAINASLSRIESQ 710
Query: 457 KCNKADKVSKEIENILSSEGNTNEKPREELVTQEKATPLLN 497
D S+ N+ SSE +E ++ +E+ T +N
Sbjct: 711 AKYIHDSHSRR--NLSSSEDELDESRLSQVAPEERLTLTVN 749
>WB|WBGene00004064 [details] [associations]
symbol:pms-2 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006298 "mismatch
repair" evidence=IEA] [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0006974 "response to DNA damage
stimulus" evidence=IMP] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR015434 Pfam:PF01119 Pfam:PF02518 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
GO:GO:0009792 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9 HSSP:P54278 KO:K10858
OMA:LDKPWNC GeneTree:ENSGT00530000063289 EMBL:Z74033 EMBL:AL022272
PIR:B89219 PIR:T21953 PIR:T21957 RefSeq:NP_505933.1
ProteinModelPortal:G5EFG5 SMR:G5EFG5 IntAct:G5EFG5 PRIDE:G5EFG5
EnsemblMetazoa:H12C20.2a GeneID:179587 KEGG:cel:CELE_H12C20.2
CTD:179587 WormBase:H12C20.2a NextBio:906048 Uniprot:G5EFG5
Length = 805
Score = 390 (142.3 bits), Expect = 1.3e-65, Sum P(4) = 1.3e-65
Identities = 135/475 (28%), Positives = 222/475 (46%)
Query: 348 MKLIGPHNVPTEENCPSPSRVMAKNITEDGESDSRSRCIQSSLNKFVTVSKRKYESIARP 407
+K++G H+ T + R+M N+++ S++ +SS T ++
Sbjct: 363 LKIVGSHS--TVRSSVEDRRIM--NLSQQSFSNASFMSSKSS-----TPDDFNNTTLNST 413
Query: 408 LTEMPLLRNQSLHCQMKKSNSDMDAVDTRSPVRR----HLVDDIA--KLNKIEPFKCNKA 461
E LL L + +K N A + +RR H V + + ++E F
Sbjct: 414 YPEDSLLNTSDL-LKQRKENRSPPAKKSCPMIRRTEPFHSVPSTSNSRTQRLENFSFTME 472
Query: 462 DK---VSKEIENILSSEGNTNEKPREELVTQEKATPLLNVPSIVSSSNDLKKNSEDLSVA 518
K VSK+I + S + T+E+ R ++ + PL I L+++ E V
Sbjct: 473 PKRVEVSKKIPS-KSDKKLTDEELRSAVIEEN---PLKKAGEI-DDIEILEQSQESQDVN 527
Query: 519 ASHL-QFSGSILDAPVPSSSLDICSTLQFSIQDLRKRRQQRLSIMQSSCHTSGSVKMRRC 577
S Q S + ++ V +L ++FS++ LR+ + ++ +T +
Sbjct: 528 ESQCSQDSQTSQNSRVSYFTLRPQQKIKFSMKLLREAYSPKTD--ETDDNTEEAE----- 580
Query: 578 FAAATLELSQPXXXXXXXXXXXXXXXXXXXXFRKEDFGRMKVIGQFNLGFIIGKLDQDLF 637
+A ++ K+DF +MK+IGQFN GFII +L LF
Sbjct: 581 -VSAEKDVLNEITTKINKEENDDAERQLSRSLTKDDFSKMKIIGQFNHGFIICRLRGHLF 639
Query: 638 IVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEED 697
IVDQHA+DEKYNFERL S L +QPL P L +E++ ++ I NGF E
Sbjct: 640 IVDQHASDEKYNFERLQSSAKLTKQPLFMPTALGFGAVQELIIRENLPIFHANGFDFEFS 699
Query: 698 PHALAGLRFRLKAVP--FSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPS 755
+ ++ L A P ++++T D++++++ ++ + Y+ P
Sbjct: 700 END-GCIKTFLTARPELLNQQLTNS--DLEEILAVVSQYPNQM-----YR--------PV 743
Query: 756 RVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
R+R + AS+ACR S+MIG L + EM +I+ HLA L+ PWNCPHGRPT+RHL L
Sbjct: 744 RIRKIFASKACRKSVMIGKPLNQREMTQIIRHLAKLDQPWNCPHGRPTIRHLASL 798
Score = 217 (81.4 bits), Expect = 1.3e-65, Sum P(4) = 1.3e-65
Identities = 49/140 (35%), Positives = 73/140 (52%)
Query: 145 DSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQYPIAIMN 204
D K+ GF+S G GR DRQ+ ++N+RPV+ +V ++N++YK N +QYPI ++
Sbjct: 264 DLFKIRGFVSSCEHGCGRGTSDRQFVYINNRPVEYSRVCSVINDVYKQFNKKQYPIIVLF 323
Query: 205 FIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASYSV--NKVEQLIEPE 262
VP DVNVTPDK+ V E +L +R + + Y S+S + VE
Sbjct: 324 IDVPPEKIDVNVTPDKKTVMLEKERHLLAVVRASMMKTYLKIVGSHSTVRSSVEDRRIMN 383
Query: 263 KSGPSSGAESCMFLEQLSPD 282
S S S M + +PD
Sbjct: 384 LSQQSFSNASFMSSKSSTPD 403
Score = 154 (59.3 bits), Expect = 1.3e-65, Sum P(4) = 1.3e-65
Identities = 31/66 (46%), Positives = 44/66 (66%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I I+K V R+ QV+ LSSA+++L++NS+DAG+T I+I +K G E +V DNG G
Sbjct: 6 IERISKEVAERLTTAQVVVSLSSAIRQLIDNSIDAGSTIIDIRVKNNGFESIEVQDNGSG 65
Query: 72 ISPNNF 77
I NF
Sbjct: 66 IEARNF 71
Score = 72 (30.4 bits), Expect = 1.3e-65, Sum P(4) = 1.3e-65
Identities = 12/52 (23%), Positives = 30/52 (57%)
Query: 79 VRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGM 130
V+ + Q++AL+ ++ +CTN +++ G++S++D + +FG+
Sbjct: 173 VKLLSTVQSFALLCPHIKILCTNNINGKKTNLICTPGGTTSIQDVVANLFGI 224
>UNIPROTKB|G5EFG5 [details] [associations]
symbol:pms-2 "Protein PMS-2, isoform a" species:6239
"Caenorhabditis elegans" [GO:0006200 "ATP catabolic process"
evidence=IBA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0032407 "MutSalpha complex binding" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032300 "mismatch repair
complex" evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IBA]
[GO:0006298 "mismatch repair" evidence=IBA] [GO:0003697
"single-stranded DNA binding" evidence=IBA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 InterPro:IPR015434 Pfam:PF01119 Pfam:PF02518
Pfam:PF08676 SMART:SM00387 SMART:SM00853 Prosite:PS00058
GO:GO:0005524 GO:GO:0009792 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407 GO:GO:0032389
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
PANTHER:PTHR10073:SF9 HSSP:P54278 KO:K10858 OMA:LDKPWNC
GeneTree:ENSGT00530000063289 EMBL:Z74033 EMBL:AL022272 PIR:B89219
PIR:T21953 PIR:T21957 RefSeq:NP_505933.1 ProteinModelPortal:G5EFG5
SMR:G5EFG5 IntAct:G5EFG5 PRIDE:G5EFG5 EnsemblMetazoa:H12C20.2a
GeneID:179587 KEGG:cel:CELE_H12C20.2 CTD:179587 WormBase:H12C20.2a
NextBio:906048 Uniprot:G5EFG5
Length = 805
Score = 390 (142.3 bits), Expect = 1.3e-65, Sum P(4) = 1.3e-65
Identities = 135/475 (28%), Positives = 222/475 (46%)
Query: 348 MKLIGPHNVPTEENCPSPSRVMAKNITEDGESDSRSRCIQSSLNKFVTVSKRKYESIARP 407
+K++G H+ T + R+M N+++ S++ +SS T ++
Sbjct: 363 LKIVGSHS--TVRSSVEDRRIM--NLSQQSFSNASFMSSKSS-----TPDDFNNTTLNST 413
Query: 408 LTEMPLLRNQSLHCQMKKSNSDMDAVDTRSPVRR----HLVDDIA--KLNKIEPFKCNKA 461
E LL L + +K N A + +RR H V + + ++E F
Sbjct: 414 YPEDSLLNTSDL-LKQRKENRSPPAKKSCPMIRRTEPFHSVPSTSNSRTQRLENFSFTME 472
Query: 462 DK---VSKEIENILSSEGNTNEKPREELVTQEKATPLLNVPSIVSSSNDLKKNSEDLSVA 518
K VSK+I + S + T+E+ R ++ + PL I L+++ E V
Sbjct: 473 PKRVEVSKKIPS-KSDKKLTDEELRSAVIEEN---PLKKAGEI-DDIEILEQSQESQDVN 527
Query: 519 ASHL-QFSGSILDAPVPSSSLDICSTLQFSIQDLRKRRQQRLSIMQSSCHTSGSVKMRRC 577
S Q S + ++ V +L ++FS++ LR+ + ++ +T +
Sbjct: 528 ESQCSQDSQTSQNSRVSYFTLRPQQKIKFSMKLLREAYSPKTD--ETDDNTEEAE----- 580
Query: 578 FAAATLELSQPXXXXXXXXXXXXXXXXXXXXFRKEDFGRMKVIGQFNLGFIIGKLDQDLF 637
+A ++ K+DF +MK+IGQFN GFII +L LF
Sbjct: 581 -VSAEKDVLNEITTKINKEENDDAERQLSRSLTKDDFSKMKIIGQFNHGFIICRLRGHLF 639
Query: 638 IVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEED 697
IVDQHA+DEKYNFERL S L +QPL P L +E++ ++ I NGF E
Sbjct: 640 IVDQHASDEKYNFERLQSSAKLTKQPLFMPTALGFGAVQELIIRENLPIFHANGFDFEFS 699
Query: 698 PHALAGLRFRLKAVP--FSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPS 755
+ ++ L A P ++++T D++++++ ++ + Y+ P
Sbjct: 700 END-GCIKTFLTARPELLNQQLTNS--DLEEILAVVSQYPNQM-----YR--------PV 743
Query: 756 RVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
R+R + AS+ACR S+MIG L + EM +I+ HLA L+ PWNCPHGRPT+RHL L
Sbjct: 744 RIRKIFASKACRKSVMIGKPLNQREMTQIIRHLAKLDQPWNCPHGRPTIRHLASL 798
Score = 217 (81.4 bits), Expect = 1.3e-65, Sum P(4) = 1.3e-65
Identities = 49/140 (35%), Positives = 73/140 (52%)
Query: 145 DSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQYPIAIMN 204
D K+ GF+S G GR DRQ+ ++N+RPV+ +V ++N++YK N +QYPI ++
Sbjct: 264 DLFKIRGFVSSCEHGCGRGTSDRQFVYINNRPVEYSRVCSVINDVYKQFNKKQYPIIVLF 323
Query: 205 FIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASYSV--NKVEQLIEPE 262
VP DVNVTPDK+ V E +L +R + + Y S+S + VE
Sbjct: 324 IDVPPEKIDVNVTPDKKTVMLEKERHLLAVVRASMMKTYLKIVGSHSTVRSSVEDRRIMN 383
Query: 263 KSGPSSGAESCMFLEQLSPD 282
S S S M + +PD
Sbjct: 384 LSQQSFSNASFMSSKSSTPD 403
Score = 154 (59.3 bits), Expect = 1.3e-65, Sum P(4) = 1.3e-65
Identities = 31/66 (46%), Positives = 44/66 (66%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I I+K V R+ QV+ LSSA+++L++NS+DAG+T I+I +K G E +V DNG G
Sbjct: 6 IERISKEVAERLTTAQVVVSLSSAIRQLIDNSIDAGSTIIDIRVKNNGFESIEVQDNGSG 65
Query: 72 ISPNNF 77
I NF
Sbjct: 66 IEARNF 71
Score = 72 (30.4 bits), Expect = 1.3e-65, Sum P(4) = 1.3e-65
Identities = 12/52 (23%), Positives = 30/52 (57%)
Query: 79 VRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGM 130
V+ + Q++AL+ ++ +CTN +++ G++S++D + +FG+
Sbjct: 173 VKLLSTVQSFALLCPHIKILCTNNINGKKTNLICTPGGTTSIQDVVANLFGI 224
>RGD|1305483 [details] [associations]
symbol:Pms2 "PMS2 postmeiotic segregation increased 2 (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0003674
"molecular_function" evidence=ND] [GO:0003697 "single-stranded DNA
binding" evidence=IBA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016446 "somatic hypermutation of immunoglobulin
genes" evidence=IBA] [GO:0016447 "somatic recombination of
immunoglobulin gene segments" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IBA] [GO:0032138 "single base insertion or
deletion binding" evidence=IEA] [GO:0032300 "mismatch repair
complex" evidence=IBA] [GO:0032389 "MutLalpha complex"
evidence=IBA] [GO:0032407 "MutSalpha complex binding" evidence=IBA]
[GO:0042493 "response to drug" evidence=IEP] InterPro:IPR002099
InterPro:IPR013507 InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676
SMART:SM00853 RGD:1305483 GO:GO:0005524 GO:GO:0042493 GO:GO:0016887
GO:GO:0006298 GO:GO:0003697 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 EMBL:CH474012 GO:GO:0007131
GO:GO:0032407 GO:GO:0016446 GO:GO:0032389 PANTHER:PTHR10073
GO:GO:0032138 GO:GO:0016447 KO:K10858 GeneTree:ENSGT00530000063289
CTD:5395 IPI:IPI00949952 RefSeq:NP_001099378.1 UniGene:Rn.102072
Ensembl:ENSRNOT00000067021 GeneID:288479 KEGG:rno:288479
NextBio:628138 Uniprot:D4A360
Length = 542
Score = 504 (182.5 bits), Expect = 9.0e-60, Sum P(3) = 9.0e-60
Identities = 104/208 (50%), Positives = 136/208 (65%)
Query: 610 RKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLK 669
RK F M+++GQFNLGFI+ KL +DLF+VDQHAADEKYNFE L Q TVL Q L+ P
Sbjct: 349 RKSMFAEMEILGQFNLGFIVTKLKEDLFLVDQHAADEKYNFEMLQQHTVLQAQRLITPQT 408
Query: 670 LDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIS 729
L+LT E V +++I RKNGF D A R +L ++P SK TFG +D+ +LI
Sbjct: 409 LNLTAVNEAVLIENLEIFRKNGFDFIIDEDAPVTERAKLISLPTSKNWTFGPQDIDELIF 468
Query: 730 TLADNQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGRNEMQKILEHL 788
L+D+ G +C PSRVR M ASRACR S+MIG AL +EM+K++ H+
Sbjct: 469 MLSDSPGV--------------MCRPSRVRQMFASRACRKSVMIGTALSASEMKKLISHM 514
Query: 789 ADLNSPWNCPHGRPTMRHLVDLTTIRKN 816
+++ PWNCPHGRPTMRH+ +L I +N
Sbjct: 515 GEMDHPWNCPHGRPTMRHIANLDVISQN 542
Score = 114 (45.2 bits), Expect = 9.0e-60, Sum P(3) = 9.0e-60
Identities = 23/69 (33%), Positives = 38/69 (55%)
Query: 194 NSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASYSVN 253
N QYP ++N V + D+NVTPDKR++ +E +L L+ L ++ + SVN
Sbjct: 3 NRHQYPFVVLNVSVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLMGMFDSDANKLSVN 62
Query: 254 KVEQLIEPE 262
+ + L+ E
Sbjct: 63 Q-QPLLNVE 70
Score = 40 (19.1 bits), Expect = 9.0e-60, Sum P(3) = 9.0e-60
Identities = 15/68 (22%), Positives = 26/68 (38%)
Query: 351 IGPHNVPTEENCPSPSRVMAKNITEDGESDSRSRCIQSSLNKFVTVSKRKYESIARPLTE 410
+ P N PS V T E D + +NK + + S+A+ + +
Sbjct: 257 LSPSNAKRFRTEDRPSNVGVPQNTSAAEVD-----VAVKINKKIVLLDFSLSSLAKQMKQ 311
Query: 411 MPLLRNQS 418
+ L+ QS
Sbjct: 312 LQHLKQQS 319
Score = 39 (18.8 bits), Expect = 1.8e-49, Sum P(2) = 1.8e-49
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 461 ADKVSKEIENILSSEGNTNEKPREELVTQEKATPLLNV 498
A+K+S + +L+ EGN + E+ QE + P L +
Sbjct: 56 ANKLSVNQQPLLNVEGNLVKLHTAEVGEQENS-PSLRI 92
>UNIPROTKB|Q22B61 [details] [associations]
symbol:TTHERM_01109940 "DNA mismatch repair protein,
C-terminal domain containing protein" species:312017 "Tetrahymena
thermophila SB210" [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0006200 "ATP catabolic process" evidence=IBA]
[GO:0006298 "mismatch repair" evidence=IBA] [GO:0007131 "reciprocal
meiotic recombination" evidence=IBA] [GO:0016887 "ATPase activity"
evidence=IBA] [GO:0032300 "mismatch repair complex" evidence=IBA]
[GO:0032389 "MutLalpha complex" evidence=IBA] [GO:0032407
"MutSalpha complex binding" evidence=IBA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
GO:GO:0016887 GO:GO:0006298 GO:GO:0003697 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407
GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9 KO:K10858
ProtClustDB:CLSZ2846737 EMBL:GG662565 RefSeq:XP_001030203.2
UniGene:Tth.6164 ProteinModelPortal:Q22B61 EnsemblProtists:EAR82540
GeneID:7840245 KEGG:tet:TTHERM_01109940 Uniprot:Q22B61
Length = 946
Score = 369 (135.0 bits), Expect = 2.0e-59, Sum P(3) = 2.0e-59
Identities = 80/219 (36%), Positives = 130/219 (59%)
Query: 609 FRKEDFGRMKVIGQFNLGFIIGK-LDQD-LFIVDQHAADEKYNFERLSQSTVLNQQPLLR 666
F+K+ F +++IGQFN FII +++D +F++DQHA+DEK N+ERL + Q L++
Sbjct: 738 FKKDKFVELQIIGQFNKAFIIAYWVEKDQIFLIDQHASDEKTNYERLLKENNFQGQKLVK 797
Query: 667 PLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGL-RFRLKAVPFSKKITFGVEDVK 725
P++L LT +E + + +I +KNGF + G + +P SK I F + D
Sbjct: 798 PIELSLTIQEADILENNREIFKKNGFQFQIKYDESNGEPNLYINQLPSSKHIQFNINDFD 857
Query: 726 DLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKIL 785
++ + + + + I +++ P +++ +LAS+ACRSSIMIG AL ++ M++IL
Sbjct: 858 EIFQNINNEETD---IETFR--------PKKIQRILASKACRSSIMIGTALNKSSMKQIL 906
Query: 786 EHLADLNSPWNCPHGRPTM------RHLVDLTTIRKNID 818
+L+ L SPWNCPHGRPTM HL+ ++K D
Sbjct: 907 LNLSKLQSPWNCPHGRPTMVKTPPMNHLIQQVQVKKTYD 945
Score = 192 (72.6 bits), Expect = 2.0e-59, Sum P(3) = 2.0e-59
Identities = 38/67 (56%), Positives = 50/67 (74%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ +++ + IC QVI DL++ VKELVENSLDAG+T IE+ LKEYG+E +VVDNG G
Sbjct: 2 IKKLDQSSILNICVNQVIIDLATCVKELVENSLDAGSTKIEVYLKEYGKEGVEVVDNGSG 61
Query: 72 ISPNNFK 78
IS N +
Sbjct: 62 ISSQNLE 68
Score = 180 (68.4 bits), Expect = 2.0e-59, Sum P(3) = 2.0e-59
Identities = 105/462 (22%), Positives = 191/462 (41%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGS--SSLKDNIITVFGMNIYNCLE 137
+ V + YA+I+ + N + K + ++L + GS ++ VF I + L
Sbjct: 170 KLVNMITEYAIISVNCQICLINQSSKKGREMILNS-GSPMKNMLQKTAQVFSKKISDMLV 228
Query: 138 PVAICKSDSCKV-EGF-LSKPGQGSGRNLGDRQ----YFFVNDRPVD-LPKVSKLVNELY 190
+ + C V EG+ L++ GS ++ Q Y FVN RPV+ K++ + +++Y
Sbjct: 229 DLKFDFGEECSVIEGYILNRQTSGSVQDSKSIQKNMSYLFVNTRPVNPFKKMNSIFSDIY 288
Query: 191 KGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASY 250
K NS I I++ V A D NV+PDKR +F E ALR+ L +++ N+
Sbjct: 289 KKYNSSARYIYILHLKVKKDAIDFNVSPDKRDIFIKYENEFYTALRDNLTQLFEKLNSIQ 348
Query: 251 SV-------NKVEQLIEPEKSGPSSGAESCMFLEQLSPDGNGCIEILNE--QQIS-KGNT 300
V +K++ + S + + + LS ++ + Q+I+ +
Sbjct: 349 KVLMPVVISSKIKDTSMDDSEDDSQESSNQQKQKTLSTQQTKQTKLFQKLKQEINIQEED 408
Query: 301 PKTVEVDTLHSDALEGLVHSSNENGKGNFTLKAHDDKSADRLSKFNCMK---LIGPHNVP 357
+ + + LE L S GK LK D + R+ N + L N
Sbjct: 409 LSNEDSEANNQKELEILSFKSPSKGKQITQLK--DTINNQRIGSSNSKRKQDLFEDVNDE 466
Query: 358 TEE--NCPSPSRVMAKNITEDGES-DSRSRCIQSSLNKFVTVSKRKYES-IARPLTEMPL 413
E+ N S S+ +K ++ E SR++ S K+ YE + E+
Sbjct: 467 IEDLSNFSSNSKAQSKQKNDNSEYFKSRNQTFNSDYFSIAQQRKKAYEEQLQNTREELQN 526
Query: 414 LRNQ-SLHCQMKKSNSDMDAVDTRSPVRRHLVDDIAKLNKIEPFKCNKADKVSKEIENIL 472
+ + + Q K+ S D + + L+++ + N+ + +K K+ K+ +
Sbjct: 527 SKEEYQENYQKKQQTSSKDHNNQNKTDSKQLINEDEEQNQDFSYFNDKL-KLYKQSKQ-- 583
Query: 473 SSEGNTNEKPREELVTQEKATPLLNVPSIVSSSNDLKKNSED 514
SE N+ + +E K + N S N K N+ED
Sbjct: 584 QSENNSKYQVKEYSFDMFKKSKQEN--SSKGQDNQ-KINNED 622
Score = 44 (20.5 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 17/46 (36%), Positives = 25/46 (54%)
Query: 713 FSKKITFGVEDVKDLISTLADNQGECSIISSYKMD--TADSVCPSR 756
FSKKI+ + D+K D ECS+I Y ++ T+ SV S+
Sbjct: 219 FSKKISDMLVDLK------FDFGEECSVIEGYILNRQTSGSVQDSK 258
>UNIPROTKB|Q7SAM1 [details] [associations]
symbol:NCU08020 "Putative uncharacterized protein"
species:367110 "Neurospora crassa OR74A" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032407 "MutSalpha complex
binding" evidence=IBA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR014763 InterPro:IPR014790 InterPro:IPR015434
Pfam:PF08676 SMART:SM00387 SMART:SM00853 Prosite:PS00058
GO:GO:0005524 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 GO:GO:0007131
GO:GO:0032407 GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9 KO:K10858
HOGENOM:HOG000165474 OrthoDB:EOG4FFH9B EMBL:AABX02000051
OMA:SDFAKMK RefSeq:XP_962690.2 UniGene:Ncr.24794
ProteinModelPortal:Q7SAM1 STRING:Q7SAM1
EnsemblFungi:EFNCRT00000008289 GeneID:3878856 KEGG:ncr:NCU08020
Uniprot:Q7SAM1
Length = 894
Score = 415 (151.1 bits), Expect = 1.6e-58, Sum P(5) = 1.6e-58
Identities = 86/194 (44%), Positives = 119/194 (61%)
Query: 633 DQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGF 692
D +LFI+DQHA+DEKYNFERL +T + Q L++P L LT EE + H+ + NGF
Sbjct: 662 DDELFIIDQHASDEKYNFERLQSTTTVQSQRLVQPKPLTLTAVEEEIILEHLPALAANGF 721
Query: 693 SLEEDP--HALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTAD 750
+ D + G R +L ++P S++ TFGV D+++LI L DN + + +
Sbjct: 722 QVRVDTSGESAVGSRCQLLSLPLSRETTFGVADLEELIFLLGDNPTSSATTAIPR----- 776
Query: 751 SVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
PS+VR M A RACRSSIMIG AL R +M+K++ H+ ++ PWNCPHGRPTMRHL L
Sbjct: 777 ---PSKVRKMFAMRACRSSIMIGRALSRPQMEKVVRHMGEMEKPWNCPHGRPTMRHLCGL 833
Query: 811 -TTIRKNIDENGAG 823
+ + I E G
Sbjct: 834 GSAFGEGIKEKERG 847
Score = 172 (65.6 bits), Expect = 1.6e-58, Sum P(5) = 1.6e-58
Identities = 34/67 (50%), Positives = 48/67 (71%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ I+ +H+I +GQVI DL S KELVEN+LDAGAT+I++ K G + +V DNG G
Sbjct: 7 IKAIDPSTIHQIQSGQVIVDLCSVAKELVENALDAGATTIDVRFKNQGLDSIEVQDNGSG 66
Query: 72 ISPNNFK 78
IS +N++
Sbjct: 67 ISSSNYE 73
Score = 83 (34.3 bits), Expect = 1.6e-58, Sum P(5) = 1.6e-58
Identities = 18/57 (31%), Positives = 29/57 (50%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCL 136
+ V L YA I V+F + K + V+ T+G+ + ++NII VFG+ L
Sbjct: 176 KVVNLLNQYACIQTSVKFTVSQQPTKGKRMVLFSTKGNPTTRENIINVFGIKTMTAL 232
Score = 82 (33.9 bits), Expect = 1.6e-58, Sum P(5) = 1.6e-58
Identities = 14/19 (73%), Positives = 17/19 (89%)
Query: 611 KEDFGRMKVIGQFNLGFII 629
K DF +MK++GQFNLGFII
Sbjct: 617 KSDFAKMKIVGQFNLGFII 635
Score = 51 (23.0 bits), Expect = 1.6e-58, Sum P(5) = 1.6e-58
Identities = 25/89 (28%), Positives = 38/89 (42%)
Query: 277 EQLSP---DGNGCIEILNEQQISKGNTPKTVEVDTLHSDALEGLVHSSNENGK--GNFTL 331
E +SP +GNG I Q +++G+ VE L DA H +++ +
Sbjct: 455 EGMSPADEEGNGPISGQTNQSVAEGDDNGEVE---LSEDAPSECCHHGDDDEEYIDEDEK 511
Query: 332 KAHDDKSADRLSKFNCMKLIGPHNVPTEE 360
KA ++K + K K N PTEE
Sbjct: 512 KAKEEKKVQEMIKAAEKKA----NEPTEE 536
Score = 48 (22.0 bits), Expect = 3.3e-58, Sum P(5) = 3.3e-58
Identities = 29/165 (17%), Positives = 70/165 (42%)
Query: 362 CPS-PSRVMAKNITE---DGESDSRSRCIQSSLNKFVTVSKRKYESIARPLTEMPLLRNQ 417
C S P+ A N+ + +S++R + + +++N S+R+ + + + P R +
Sbjct: 300 CESTPANTQASNLLARWLERKSEARKQPVSAAIN--ANDSRREKSPVEKE-PQSPK-RAR 355
Query: 418 SLHCQMKKSNSDMDAVDTRSPVRRH-LVDDIAKLNKIEPFKCNKADKVSKEIENILSSEG 476
+ +S+++ D + V + + D+ +++ + I
Sbjct: 356 RYDTKDAESDAEQDTAEDNEHVENNSMTQDVVDDKEMDRQELTMPSIPPPTQPPIPKGSL 415
Query: 477 NTNEKPREELVTQEKATPLL---NVPSIVSSSNDLKKNSEDLSVA 518
+ +P + +E AT + ++ S++ SSN + SE +S A
Sbjct: 416 LSISRPPKRSAQEEVATITIGGHSITSVIGSSNKRSRLSEGMSPA 460
Score = 43 (20.2 bits), Expect = 1.1e-57, Sum P(5) = 1.1e-57
Identities = 48/198 (24%), Positives = 76/198 (38%)
Query: 300 TPKTVE-VDT--LHSDALEGLVHSSNENGKGN-FTLKAHDDKSADRLSKFNCMKLIGPHN 355
+PK DT SDA + NE+ + N T DDK DR M I P
Sbjct: 350 SPKRARRYDTKDAESDAEQDTAED-NEHVENNSMTQDVVDDKEMDRQEL--TMPSIPP-- 404
Query: 356 VPTEENCPSPSRV-MAKNITEDGESDSRSRCIQSSLNKFVTVSKRKYESIARPLTEMPLL 414
PT+ P S + +++ + + + I V S K ++ ++
Sbjct: 405 -PTQPPIPKGSLLSISRPPKRSAQEEVATITIGGHSITSVIGSSNKRSRLSEGMSPADEE 463
Query: 415 RNQSLHCQMKKS------NSDMD-AVDTRSPVRRHLVDDIAKLNKIEPFKCNKADKVSKE 467
N + Q +S N +++ + D S H DD +++ E KA + K
Sbjct: 464 GNGPISGQTNQSVAEGDDNGEVELSEDAPSECCHHGDDDEEYIDEDE----KKAKEEKKV 519
Query: 468 IENILSSEGNTNEKPREE 485
E I ++E NE P EE
Sbjct: 520 QEMIKAAEKKANE-PTEE 536
>GENEDB_PFALCIPARUM|MAL7P1.145 [details] [associations]
symbol:MAL7P1.145 "mismatch repair protein
pms1 homologue, putative" species:5833 "Plasmodium falciparum"
[GO:0003684 "damaged DNA binding" evidence=ISS] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0003684
GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:AL844506 HSSP:P23367 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9
RefSeq:XP_001349161.1 ProteinModelPortal:Q8IBJ3 IntAct:Q8IBJ3
MINT:MINT-1637001 EnsemblProtists:MAL7P1.145:mRNA GeneID:2655088
KEGG:pfa:MAL7P1.145 EuPathDB:PlasmoDB:PF3D7_0726300 Uniprot:Q8IBJ3
Length = 1330
Score = 267 (99.0 bits), Expect = 2.3e-55, Sum P(6) = 2.3e-55
Identities = 61/173 (35%), Positives = 102/173 (58%)
Query: 82 VFLCQAYALIAKGVRFVCTN-TTGKN-VKSV-VLKTQGSSSLKDNIITVFGM-NIYNCLE 137
+ L Q YA+I ++FV N T K K++ +L T G+ S+K N +++G NI N +E
Sbjct: 174 LLLMQQYAIIYHNIKFVIYNIVTSKGCTKNMNLLITNGTDSIKKNFYSIYGKRNIGNLIE 233
Query: 138 PVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPK-VSKLVNELYKGANSR 196
+ + G++S SGR D Q++++N RP+ + K V+KL+N +Y+ NSR
Sbjct: 234 --FNIDGNEWNIRGYISD--SNSGRRDKDLQFYYINSRPIHILKNVNKLINTIYREFNSR 289
Query: 197 QYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNAS 249
YPI I N + T+ D+NVTPDKR+VFF+ E + ++ L ++++P ++
Sbjct: 290 LYPIIICNILSDTKNIDINVTPDKREVFFTFEQEMCEHMKTALVKLFTPKTSN 342
Score = 179 (68.1 bits), Expect = 2.3e-55, Sum P(6) = 2.3e-55
Identities = 51/141 (36%), Positives = 80/141 (56%)
Query: 694 LEEDPHALAGLRFRLKAVP-FSKKITFGVEDVKDLISTLAD------NQGECSIISSY-- 744
++++ L L L ++P F+ KI V D L+ L + N+ E S+ ++
Sbjct: 1145 IDDEEEMLMELNVYLLSLPVFNGKI-LEVVDFMSLLHHLTEHPVASYNESEVSVKTTIDL 1203
Query: 745 --KMDT---ADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPH 799
K DT + P +V +LAS+ACR++IM+G AL EM KI + L+ L +PWNCPH
Sbjct: 1204 NNKTDTWFNYNFPRPQKVWRILASKACRNAIMVGKALNIYEMIKIKKKLSFLKNPWNCPH 1263
Query: 800 GRPTMRHLVDLTTIRKNIDEN 820
GRPT+++L++ I KN +N
Sbjct: 1264 GRPTIKYLINNVDI-KNCFKN 1283
Score = 158 (60.7 bits), Expect = 2.3e-55, Sum P(6) = 2.3e-55
Identities = 35/67 (52%), Positives = 45/67 (67%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ I + +H IC+ QVI LSS VKELVENS+DA A+ I+I L E G + +V DNG G
Sbjct: 3 IKNIGEESIHNICSSQVIFTLSSVVKELVENSIDADASEIKIKLVESGIKLIEVNDNGVG 62
Query: 72 ISPNNFK 78
I NF+
Sbjct: 63 IKKINFE 69
Score = 127 (49.8 bits), Expect = 2.3e-55, Sum P(6) = 2.3e-55
Identities = 25/70 (35%), Positives = 43/70 (61%)
Query: 631 KLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKN 690
K + LFI+DQHAADEK NFE+ ++ + Q L+ + + ++P + + +M I +N
Sbjct: 1060 KSNYALFIIDQHAADEKSNFEKYNKIFTMKSQKLISKIHVQVSPAQVHIIQKYMSIFLQN 1119
Query: 691 GFSLE--EDP 698
GF ++ E+P
Sbjct: 1120 GFEVQILEEP 1129
Score = 73 (30.8 bits), Expect = 2.3e-55, Sum P(6) = 2.3e-55
Identities = 12/25 (48%), Positives = 18/25 (72%)
Query: 609 FRKEDFGRMKVIGQFNLGFIIGKLD 633
F+ F ++K+ GQFN GF+I K+D
Sbjct: 990 FQSSLFNKLKICGQFNKGFVISKID 1014
Score = 44 (20.5 bits), Expect = 2.3e-55, Sum P(6) = 2.3e-55
Identities = 14/55 (25%), Positives = 27/55 (49%)
Query: 425 KSNSDMDAVDTRSPVRRHLVDDIAKLNKIEPFKCNKADKVSKEIENILSSEGNTN 479
K NSD DT++ + + +++ N I +K N D + E L+++ + N
Sbjct: 669 KLNSD----DTKNNIYEYKLNNDDTKNNIYEYKLNNDDTKNNIYEYKLNNDDSNN 719
Score = 42 (19.8 bits), Expect = 3.0e-43, Sum P(4) = 3.0e-43
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 321 SNENG-KGNFTLKAHDDKSADRLSKF 345
SN+N K N+ L D +AD S F
Sbjct: 1054 SNDNKHKSNYALFIIDQHAADEKSNF 1079
Score = 41 (19.5 bits), Expect = 4.7e-55, Sum P(6) = 4.7e-55
Identities = 20/104 (19%), Positives = 45/104 (43%)
Query: 380 DSRSRCIQSSLNKFVTVSKRKYESIARPLT-EMPLLRNQSLHCQMKKSNS---DMDAVDT 435
+ +S I+ +F T + + S + PL+ + ++ N H +N ++ DT
Sbjct: 603 EQKSGYIKKGGEEFNTYNDEEIYS-SGPLSIDNVMMENNKEHFSDMNNNVYEYKLNNDDT 661
Query: 436 RSPVRRHLVDDIAKLNKIEPFKCNKADKVSKEIENILSSEGNTN 479
++ + + ++ N I +K N D + E L+++ N
Sbjct: 662 KNNIYEYKLNSDDTKNNIYEYKLNNDDTKNNIYEYKLNNDDTKN 705
Score = 40 (19.1 bits), Expect = 6.0e-55, Sum P(6) = 6.0e-55
Identities = 13/55 (23%), Positives = 27/55 (49%)
Query: 425 KSNSDMDAVDTRSPVRRHLVDDIAKLNKIEPFKCNKADKVSKEIENILSSEGNTN 479
K N+D DT++ + + +++ N I +K N D + E L+++ + N
Sbjct: 683 KLNND----DTKNNIYEYKLNNDDTKNNIYEYKLNNDDSNNTIYEYKLNNDDSNN 733
Score = 39 (18.8 bits), Expect = 7.6e-55, Sum P(6) = 7.6e-55
Identities = 13/55 (23%), Positives = 27/55 (49%)
Query: 425 KSNSDMDAVDTRSPVRRHLVDDIAKLNKIEPFKCNKADKVSKEIENILSSEGNTN 479
K N+D DT++ + + +++ N I +K N D + E L+++ + N
Sbjct: 697 KLNND----DTKNNIYEYKLNNDDSNNTIYEYKLNNDDSNNTIYEYKLNNDDSNN 747
Score = 39 (18.8 bits), Expect = 1.6e-19, Sum P(5) = 1.6e-19
Identities = 8/37 (21%), Positives = 17/37 (45%)
Query: 90 LIAKGVRFVCTNTTGKNVKSV----VLKTQGSSSLKD 122
L+ G++ + N G +K + + +S +KD
Sbjct: 46 LVESGIKLIEVNDNGVGIKKINFENICARHATSKIKD 82
>UNIPROTKB|Q8IBJ3 [details] [associations]
symbol:MAL7P1.145 "Mismatch repair protein pms1 homologue,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0003684
"damaged DNA binding" evidence=ISS] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0003684
GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:AL844506 HSSP:P23367 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9
RefSeq:XP_001349161.1 ProteinModelPortal:Q8IBJ3 IntAct:Q8IBJ3
MINT:MINT-1637001 EnsemblProtists:MAL7P1.145:mRNA GeneID:2655088
KEGG:pfa:MAL7P1.145 EuPathDB:PlasmoDB:PF3D7_0726300 Uniprot:Q8IBJ3
Length = 1330
Score = 267 (99.0 bits), Expect = 2.3e-55, Sum P(6) = 2.3e-55
Identities = 61/173 (35%), Positives = 102/173 (58%)
Query: 82 VFLCQAYALIAKGVRFVCTN-TTGKN-VKSV-VLKTQGSSSLKDNIITVFGM-NIYNCLE 137
+ L Q YA+I ++FV N T K K++ +L T G+ S+K N +++G NI N +E
Sbjct: 174 LLLMQQYAIIYHNIKFVIYNIVTSKGCTKNMNLLITNGTDSIKKNFYSIYGKRNIGNLIE 233
Query: 138 PVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPK-VSKLVNELYKGANSR 196
+ + G++S SGR D Q++++N RP+ + K V+KL+N +Y+ NSR
Sbjct: 234 --FNIDGNEWNIRGYISD--SNSGRRDKDLQFYYINSRPIHILKNVNKLINTIYREFNSR 289
Query: 197 QYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNAS 249
YPI I N + T+ D+NVTPDKR+VFF+ E + ++ L ++++P ++
Sbjct: 290 LYPIIICNILSDTKNIDINVTPDKREVFFTFEQEMCEHMKTALVKLFTPKTSN 342
Score = 179 (68.1 bits), Expect = 2.3e-55, Sum P(6) = 2.3e-55
Identities = 51/141 (36%), Positives = 80/141 (56%)
Query: 694 LEEDPHALAGLRFRLKAVP-FSKKITFGVEDVKDLISTLAD------NQGECSIISSY-- 744
++++ L L L ++P F+ KI V D L+ L + N+ E S+ ++
Sbjct: 1145 IDDEEEMLMELNVYLLSLPVFNGKI-LEVVDFMSLLHHLTEHPVASYNESEVSVKTTIDL 1203
Query: 745 --KMDT---ADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPH 799
K DT + P +V +LAS+ACR++IM+G AL EM KI + L+ L +PWNCPH
Sbjct: 1204 NNKTDTWFNYNFPRPQKVWRILASKACRNAIMVGKALNIYEMIKIKKKLSFLKNPWNCPH 1263
Query: 800 GRPTMRHLVDLTTIRKNIDEN 820
GRPT+++L++ I KN +N
Sbjct: 1264 GRPTIKYLINNVDI-KNCFKN 1283
Score = 158 (60.7 bits), Expect = 2.3e-55, Sum P(6) = 2.3e-55
Identities = 35/67 (52%), Positives = 45/67 (67%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ I + +H IC+ QVI LSS VKELVENS+DA A+ I+I L E G + +V DNG G
Sbjct: 3 IKNIGEESIHNICSSQVIFTLSSVVKELVENSIDADASEIKIKLVESGIKLIEVNDNGVG 62
Query: 72 ISPNNFK 78
I NF+
Sbjct: 63 IKKINFE 69
Score = 127 (49.8 bits), Expect = 2.3e-55, Sum P(6) = 2.3e-55
Identities = 25/70 (35%), Positives = 43/70 (61%)
Query: 631 KLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKN 690
K + LFI+DQHAADEK NFE+ ++ + Q L+ + + ++P + + +M I +N
Sbjct: 1060 KSNYALFIIDQHAADEKSNFEKYNKIFTMKSQKLISKIHVQVSPAQVHIIQKYMSIFLQN 1119
Query: 691 GFSLE--EDP 698
GF ++ E+P
Sbjct: 1120 GFEVQILEEP 1129
Score = 73 (30.8 bits), Expect = 2.3e-55, Sum P(6) = 2.3e-55
Identities = 12/25 (48%), Positives = 18/25 (72%)
Query: 609 FRKEDFGRMKVIGQFNLGFIIGKLD 633
F+ F ++K+ GQFN GF+I K+D
Sbjct: 990 FQSSLFNKLKICGQFNKGFVISKID 1014
Score = 44 (20.5 bits), Expect = 2.3e-55, Sum P(6) = 2.3e-55
Identities = 14/55 (25%), Positives = 27/55 (49%)
Query: 425 KSNSDMDAVDTRSPVRRHLVDDIAKLNKIEPFKCNKADKVSKEIENILSSEGNTN 479
K NSD DT++ + + +++ N I +K N D + E L+++ + N
Sbjct: 669 KLNSD----DTKNNIYEYKLNNDDTKNNIYEYKLNNDDTKNNIYEYKLNNDDSNN 719
Score = 42 (19.8 bits), Expect = 3.0e-43, Sum P(4) = 3.0e-43
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 321 SNENG-KGNFTLKAHDDKSADRLSKF 345
SN+N K N+ L D +AD S F
Sbjct: 1054 SNDNKHKSNYALFIIDQHAADEKSNF 1079
Score = 41 (19.5 bits), Expect = 4.7e-55, Sum P(6) = 4.7e-55
Identities = 20/104 (19%), Positives = 45/104 (43%)
Query: 380 DSRSRCIQSSLNKFVTVSKRKYESIARPLT-EMPLLRNQSLHCQMKKSNS---DMDAVDT 435
+ +S I+ +F T + + S + PL+ + ++ N H +N ++ DT
Sbjct: 603 EQKSGYIKKGGEEFNTYNDEEIYS-SGPLSIDNVMMENNKEHFSDMNNNVYEYKLNNDDT 661
Query: 436 RSPVRRHLVDDIAKLNKIEPFKCNKADKVSKEIENILSSEGNTN 479
++ + + ++ N I +K N D + E L+++ N
Sbjct: 662 KNNIYEYKLNSDDTKNNIYEYKLNNDDTKNNIYEYKLNNDDTKN 705
Score = 40 (19.1 bits), Expect = 6.0e-55, Sum P(6) = 6.0e-55
Identities = 13/55 (23%), Positives = 27/55 (49%)
Query: 425 KSNSDMDAVDTRSPVRRHLVDDIAKLNKIEPFKCNKADKVSKEIENILSSEGNTN 479
K N+D DT++ + + +++ N I +K N D + E L+++ + N
Sbjct: 683 KLNND----DTKNNIYEYKLNNDDTKNNIYEYKLNNDDSNNTIYEYKLNNDDSNN 733
Score = 39 (18.8 bits), Expect = 7.6e-55, Sum P(6) = 7.6e-55
Identities = 13/55 (23%), Positives = 27/55 (49%)
Query: 425 KSNSDMDAVDTRSPVRRHLVDDIAKLNKIEPFKCNKADKVSKEIENILSSEGNTN 479
K N+D DT++ + + +++ N I +K N D + E L+++ + N
Sbjct: 697 KLNND----DTKNNIYEYKLNNDDSNNTIYEYKLNNDDSNNTIYEYKLNNDDSNN 747
Score = 39 (18.8 bits), Expect = 1.6e-19, Sum P(5) = 1.6e-19
Identities = 8/37 (21%), Positives = 17/37 (45%)
Query: 90 LIAKGVRFVCTNTTGKNVKSV----VLKTQGSSSLKD 122
L+ G++ + N G +K + + +S +KD
Sbjct: 46 LVESGIKLIEVNDNGVGIKKINFENICARHATSKIKD 82
>UNIPROTKB|Q7RPM0 [details] [associations]
symbol:PY01438 "DNA mismatch repair protein, C-terminal
domain, putative" species:73239 "Plasmodium yoelii yoelii"
[GO:0003697 "single-stranded DNA binding" evidence=IBA] [GO:0006200
"ATP catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032407 "MutSalpha complex
binding" evidence=IBA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR015434 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0016887
GO:GO:0006298 GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407
eggNOG:COG0323 GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 PANTHER:PTHR10073:SF9 HSSP:P54278 KO:K10858
EMBL:AABL01000381 RefSeq:XP_729204.1 ProteinModelPortal:Q7RPM0
GeneID:3801758 KEGG:pyo:PY01438 EuPathDB:PlasmoDB:PY01438
Uniprot:Q7RPM0
Length = 1157
Score = 252 (93.8 bits), Expect = 1.1e-50, Sum P(6) = 1.1e-50
Identities = 59/172 (34%), Positives = 104/172 (60%)
Query: 84 LCQAYALIAKGVRFVCTNT-TGKN-VKSV-VLKTQGSSSLKDNIITVFGM-NIYNCLEPV 139
L Q YA+I ++F+ N T K K++ +L T GS +K N ++FG NI N ++
Sbjct: 176 LMQQYAIIYHEIKFMIFNVVTQKGCTKNMNMLITNGSDDIKKNFYSIFGKKNIGNLID-- 233
Query: 140 AICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPK-VSKLVNELYKGANSRQY 198
+++ V+G++S SGR D Q++++N+RP+ + K V+K++N +Y+ NSR Y
Sbjct: 234 FNITNENWLVKGYISD--SNSGRRDKDLQFYYMNNRPIHVIKNVNKIINTIYREFNSRLY 291
Query: 199 PIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASY 250
PI I N + ++ D+NVTPDKR+VFF+ E + ++ L ++ +P +++
Sbjct: 292 PIIIFNILSDSKNIDINVTPDKREVFFTFENELCEEIKTELIKLLTPKTSNF 343
Score = 162 (62.1 bits), Expect = 1.1e-50, Sum P(6) = 1.1e-50
Identities = 35/67 (52%), Positives = 45/67 (67%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ I +H IC+ QVI LS+ VKELVENS+DAGAT I++ L E G + +V DNG G
Sbjct: 3 IKSIGDESIHNICSSQVIFTLSNVVKELVENSIDAGATEIKVKLVENGIKIIEVSDNGNG 62
Query: 72 ISPNNFK 78
I NF+
Sbjct: 63 IKKINFE 69
Score = 144 (55.7 bits), Expect = 1.1e-50, Sum P(6) = 1.1e-50
Identities = 27/76 (35%), Positives = 48/76 (63%)
Query: 740 IISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPH 799
I++S + P + + L ACR+++M+G L +EM +I + L+ L +PWNCPH
Sbjct: 1031 ILASKYVSFCTVTVPLYLFSPLFVSACRNAVMVGKTLNISEMIRIKKKLSVLQNPWNCPH 1090
Query: 800 GRPTMRHLVDLTTIRK 815
GRPT++++++ I+K
Sbjct: 1091 GRPTIKYIINNIEIQK 1106
Score = 132 (51.5 bits), Expect = 1.1e-50, Sum P(6) = 1.1e-50
Identities = 26/65 (40%), Positives = 42/65 (64%)
Query: 636 LFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLE 695
LFI+DQHAADEK NFE+ ++ + Q L+ ++L+L+P + + + I +NGF +E
Sbjct: 871 LFIIDQHAADEKSNFEKYNKIFTMKSQKLINKIELELSPAQIHIIEKNFVIFLRNGFEIE 930
Query: 696 --EDP 698
E+P
Sbjct: 931 IIEEP 935
Score = 71 (30.1 bits), Expect = 1.1e-50, Sum P(6) = 1.1e-50
Identities = 12/25 (48%), Positives = 18/25 (72%)
Query: 609 FRKEDFGRMKVIGQFNLGFIIGKLD 633
F+ F ++K+ GQFN GFI+ K+D
Sbjct: 814 FKSNLFKKLKICGQFNKGFILSKID 838
Score = 47 (21.6 bits), Expect = 3.3e-29, Sum P(5) = 3.3e-29
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 486 LVTQEKATPLLNVPSIVSSSNDLKKN 511
+VTQ+ T +N+ I + S+D+KKN
Sbjct: 194 VVTQKGCTKNMNM-LITNGSDDIKKN 218
Score = 47 (21.6 bits), Expect = 1.6e-17, Sum P(5) = 1.6e-17
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 278 QLSPDGNGCIEILNEQQISKGNTPKTVEVDTLHS 311
++S +GNG +I E ++ T K E D +H+
Sbjct: 55 EVSDNGNGIKKINFENVCARHATSKISEFDDIHN 88
Score = 39 (18.8 bits), Expect = 2.1e-38, Sum P(4) = 2.1e-38
Identities = 11/26 (42%), Positives = 13/26 (50%)
Query: 322 NEN--GKGNFTLKAHDDKSADRLSKF 345
NEN K N+ L D +AD S F
Sbjct: 860 NENVDRKNNYALFIIDQHAADEKSNF 885
Score = 38 (18.4 bits), Expect = 1.1e-50, Sum P(6) = 1.1e-50
Identities = 9/32 (28%), Positives = 20/32 (62%)
Query: 423 MKKSNSDMDAVDTRSPVRRHLVDDIAKLNKIE 454
+KK+ S+ DA+ T+ ++ +D ++ +IE
Sbjct: 595 IKKTGSEYDAIKTKVTKEQNESED--EIKEIE 624
>UNIPROTKB|A8IT98 [details] [associations]
symbol:CHLREDRAFT_101121 "Predicted protein" species:3055
"Chlamydomonas reinhardtii" [GO:0003697 "single-stranded DNA
binding" evidence=IBA] [GO:0006200 "ATP catabolic process"
evidence=IBA] [GO:0006298 "mismatch repair" evidence=IBA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IBA]
[GO:0016887 "ATPase activity" evidence=IBA] [GO:0032300 "mismatch
repair complex" evidence=IBA] [GO:0032389 "MutLalpha complex"
evidence=IBA] [GO:0032407 "MutSalpha complex binding" evidence=IBA]
InterPro:IPR002099 InterPro:IPR014790 InterPro:IPR015434
Pfam:PF08676 SMART:SM00853 GO:GO:0005524 GO:GO:0016887
GO:GO:0006298 GO:GO:0003697 GO:GO:0030983 GO:GO:0007131
GO:GO:0032407 eggNOG:COG0323 GO:GO:0032389 PANTHER:PTHR10073
PANTHER:PTHR10073:SF9 KO:K10858 EMBL:DS496122 RefSeq:XP_001692227.1
EnsemblPlants:EDP04177 GeneID:5717917 KEGG:cre:CHLREDRAFT_101121
ProtClustDB:CLSN2921379 Uniprot:A8IT98
Length = 193
Score = 374 (136.7 bits), Expect = 1.5e-33, P = 1.5e-33
Identities = 88/194 (45%), Positives = 116/194 (59%)
Query: 618 KVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLD---LTP 674
+V+GQFNLGFI+ +D+FIVDQHAADEK FERL +S L +QPLL P+ L L P
Sbjct: 2 QVLGQFNLGFILAAHGRDVFIVDQHAADEKTTFERLQRSVALTRQPLLAPMPLPPGLLLP 61
Query: 675 EEEVVASMHMDIIRKNGFS-LEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
++++ H+D+ R+NGF ++ P AG RL VP L
Sbjct: 62 LDQLLIREHIDVFRRNGFDFVQRTP---AG---RLVPVPSPAPAPAPAPAPLSLAFV--- 112
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNS 793
I S ++ + RVRAMLASRACRSSIM+G L R +M+++L+ LA+L
Sbjct: 113 ------IYSPVRVRSPPPNPDPRVRAMLASRACRSSIMVGRPLDRPQMRRVLDRLAELRQ 166
Query: 794 PWNCPHGRPTMRHL 807
PWNCPHGRPTMRH+
Sbjct: 167 PWNCPHGRPTMRHV 180
>UNIPROTKB|E1BA65 [details] [associations]
symbol:PMS2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0032407 "MutSalpha complex binding" evidence=IEA]
[GO:0032389 "MutLalpha complex" evidence=IEA] [GO:0032138 "single
base insertion or deletion binding" evidence=IEA] [GO:0016447
"somatic recombination of immunoglobulin gene segments"
evidence=IEA] [GO:0016446 "somatic hypermutation of immunoglobulin
genes" evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 Pfam:PF01119 SMART:SM00387
Prosite:PS00058 GO:GO:0005524 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0016446
GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032138 GO:GO:0016447
GeneTree:ENSGT00530000063289 EMBL:DAAA02058333 IPI:IPI00699806
Ensembl:ENSBTAT00000037121 OMA:PSDSICE Uniprot:E1BA65
Length = 675
Score = 222 (83.2 bits), Expect = 2.5e-32, Sum P(2) = 2.5e-32
Identities = 41/67 (61%), Positives = 55/67 (82%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+PI++ VH+IC+GQV+ LS+AVKELVENS+DAGATSI++ LK+YG E +V DNGCG
Sbjct: 8 IKPIDRKSVHQICSGQVVLGLSTAVKELVENSVDAGATSIDLRLKDYGVELIEVSDNGCG 67
Query: 72 ISPNNFK 78
+ NF+
Sbjct: 68 VEEENFE 74
Score = 218 (81.8 bits), Expect = 2.5e-32, Sum P(2) = 2.5e-32
Identities = 54/157 (34%), Positives = 85/157 (54%)
Query: 105 KNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNL 164
K ++S++ Q S D+I +G++ L + C + GF+S G GR+
Sbjct: 227 KQLQSLIPFVQLPPS--DSICEEYGLSCSQALHNL-FC------ISGFVSHCAHGVGRSS 277
Query: 165 GDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVF 224
DRQ+FF+N RP D KVS+LVNE+Y N QYP ++N V + D+NVTPDKR++
Sbjct: 278 TDRQFFFINRRPCDPSKVSRLVNEVYHMYNRHQYPFVVLNVSVDSACVDINVTPDKRQIL 337
Query: 225 FSDECSILHALREGLQEIYSPNNASYSVNKVEQLIEP 261
+E +L L+ L ++ + VNK++ +P
Sbjct: 338 LQEEKLLLAVLKTSLIGMFESD-----VNKLQVSQQP 369
Score = 128 (50.1 bits), Expect = 6.6e-23, Sum P(2) = 6.6e-23
Identities = 32/74 (43%), Positives = 43/74 (58%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP- 138
+ V + QAY +I+ GVR CTN G+ + V+ T GSSS+K+NI VFG L P
Sbjct: 176 KMVQVLQAYCIISAGVRISCTNQVGQGKRQPVVCTSGSSSMKENIGLVFGQKQLQSLIPF 235
Query: 139 VAICKSDS-CKVEG 151
V + SDS C+ G
Sbjct: 236 VQLPPSDSICEEYG 249
Score = 37 (18.1 bits), Expect = 2.0e-13, Sum P(2) = 2.0e-13
Identities = 8/15 (53%), Positives = 9/15 (60%)
Query: 564 SSCHTSGSVKMRRCF 578
S+CHTS V R F
Sbjct: 116 STCHTSVKVGTRLVF 130
>UNIPROTKB|Q8TTB5 [details] [associations]
symbol:mutL "DNA mismatch repair protein MutL"
species:188937 "Methanosarcina acetivorans C2A" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] HAMAP:MF_00149
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 InterPro:IPR020667
Pfam:PF01119 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:AE010299 GenomeReviews:AE010299_GR
eggNOG:COG0323 HSSP:P23367 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032300 KO:K03572 OMA:FLFINNR
RefSeq:NP_615486.1 ProteinModelPortal:Q8TTB5 GeneID:1472414
KEGG:mac:MA0522 ProtClustDB:CLSK449998
BioCyc:MACE188937:GI2O-589-MONOMER Uniprot:Q8TTB5
Length = 656
Score = 160 (61.4 bits), Expect = 5.7e-28, Sum P(3) = 5.7e-28
Identities = 46/169 (27%), Positives = 84/169 (49%)
Query: 89 ALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCK 148
AL G+ F + GK V +++ GSS L +++ + G + + P+ +++ +
Sbjct: 183 ALANPGISFTLLSE-GKPV----IRSTGSSDLFKSLVNLLGPDTARSMLPLEY-RTEDFE 236
Query: 149 VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNE-LYKGANSRQYPIAIMNFIV 207
+ G++SKP G + D+ Y FVN RPV ++ V E Y +YP+A++ +
Sbjct: 237 IRGYVSKPETNRGGS--DQLYVFVNTRPVTSRAINMAVREGYYTKIPKGRYPVAVLALTL 294
Query: 208 PTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASYSVNKVE 256
DVNV P K +V FS E + A+ ++++ S + + V + E
Sbjct: 295 NPEEVDVNVHPRKAEVRFSREKEVGDAVIRAVEKVLSEHGLAPEVREKE 343
Score = 149 (57.5 bits), Expect = 5.7e-28, Sum P(3) = 5.7e-28
Identities = 29/62 (46%), Positives = 46/62 (74%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR +++ +++I AG+VI+ +S VKELV+NS+DAGAT I I +++ G+ + DNGCG
Sbjct: 8 IRILDRDTINKIAAGEVIERPASVVKELVDNSIDAGATEIRIEVEKGGKHSILIRDNGCG 67
Query: 72 IS 73
+S
Sbjct: 68 MS 69
Score = 138 (53.6 bits), Expect = 5.7e-28, Sum P(3) = 5.7e-28
Identities = 25/80 (31%), Positives = 51/80 (63%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEE 676
+++IGQ + +I+ + +DL I+DQHAA E+ +E++ ++ Q L+ P+ ++LTP+E
Sbjct: 470 LRIIGQVSKMYILAEKGEDLVIIDQHAAHERVLYEQVLRTKKARVQELITPVMIELTPKE 529
Query: 677 EVVASMHMDIIRKNGFSLEE 696
V+ ++ + + GF + E
Sbjct: 530 RVLMEEYIPHLEEYGFGISE 549
Score = 121 (47.7 bits), Expect = 3.3e-26, Sum P(3) = 3.3e-26
Identities = 48/181 (26%), Positives = 86/181 (47%)
Query: 628 IIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDII 687
IIG++ + ++I+ + D + + VL +Q +LR K + +E++ + +++
Sbjct: 472 IIGQVSK-MYILAEKGEDLVIIDQHAAHERVLYEQ-VLRTKKARV---QELITPVMIELT 526
Query: 688 RKNGFSLEED-PHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKM 746
K +EE PH L F + F T+ V V ++ L D +IS
Sbjct: 527 PKERVLMEEYIPH-LEEYGFGISE--FGDN-TYVVTFVPEVFGRLEDTGVIHDVISDLLA 582
Query: 747 D---TADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPT 803
+ D+ +V LA CR++I G A +M++++E L SP++CPHGRPT
Sbjct: 583 EGKVKKDTGISEKVSKTLA---CRAAIKGGAACNTRQMEELIEQLKAAESPYSCPHGRPT 639
Query: 804 M 804
+
Sbjct: 640 V 640
Score = 45 (20.9 bits), Expect = 2.2e-18, Sum P(3) = 2.2e-18
Identities = 20/73 (27%), Positives = 31/73 (42%)
Query: 450 LNKIEPFKCNKADKVSKEIENILSSEGNTNE-KPREELVTQEKATPLLNVPSIVSSSNDL 508
L K+EP + +KV+ E I + E + + KP+ E L + VS L
Sbjct: 430 LKKVEPASKKEEEKVN---ERIKAEEKQSQKLKPKANTDLLED----LRIIGQVSKMYIL 482
Query: 509 KKNSEDLSVAASH 521
+ EDL + H
Sbjct: 483 AEKGEDLVIIDQH 495
>UNIPROTKB|Q74BP0 [details] [associations]
symbol:mutL "DNA mismatch repair protein MutL"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] HAMAP:MF_00149
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 InterPro:IPR020667
Pfam:PF01119 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0016887 GO:GO:0006298
EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
eggNOG:COG0323 HSSP:P23367 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032300 HOGENOM:HOG000256550 KO:K03572
OMA:FLFINNR ProtClustDB:PRK00095 RefSeq:NP_953050.1
ProteinModelPortal:Q74BP0 GeneID:2688110 KEGG:gsu:GSU2001
PATRIC:22026863 BioCyc:GSUL243231:GH27-2035-MONOMER Uniprot:Q74BP0
Length = 606
Score = 192 (72.6 bits), Expect = 1.2e-27, Sum P(3) = 1.2e-27
Identities = 60/197 (30%), Positives = 96/197 (48%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQ---QPLLRPLKL 670
F + VIGQ+N +I+ + DL I+DQHAA E+ FERL + Q LL P +
Sbjct: 415 FSSLAVIGQYNASYILCQDGSDLVIIDQHAAHERVAFERLKTQFAAGRVEGQGLLFPETV 474
Query: 671 DLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIST 730
+L+ E V H + + GF LE+ G + +K +P ++ G + ++ L T
Sbjct: 475 ELSHRESAVVREHGGELGRLGFDLED----FGGTTWIVKGIP---RLLAGTDYLRLLRDT 527
Query: 731 LADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLAD 790
L + Q S+ +S + AD+V +L AC S + L E++ + H+
Sbjct: 528 LEELQ---SLGASRSI--ADAV-----EDILTRVACHSVVRGEHPLTTGEIEALFAHMDA 577
Query: 791 LNSPWNCPHGRPTMRHL 807
+ NCPHGRP ++ L
Sbjct: 578 TDFSTNCPHGRPVLQRL 594
Score = 125 (49.1 bits), Expect = 1.2e-27, Sum P(3) = 1.2e-27
Identities = 25/62 (40%), Positives = 42/62 (67%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR + + + ++I AG+V++ +S VKELVEN+LDAG I + ++ G ++ D+GCG
Sbjct: 5 IRILPEILTNKIAAGEVVERPASVVKELVENALDAGCGEIIVEIEGGGRRLIRITDDGCG 64
Query: 72 IS 73
+S
Sbjct: 65 MS 66
Score = 123 (48.4 bits), Expect = 1.2e-27, Sum P(3) = 1.2e-27
Identities = 39/154 (25%), Positives = 70/154 (45%)
Query: 89 ALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCK 148
AL VRF C + GK + + +L D + + G + + L PV + ++ +
Sbjct: 180 ALSRPEVRFTCVSD-GKTLFRAL-----DGTLLDRVAALLGKTVASALHPVDLA-TEGVR 232
Query: 149 VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSR-QYPIAIMNFIV 207
V G +++P R+ Y ++N R + V + + Y+ R +YP+ ++ V
Sbjct: 233 VTGLVARPDVS--RSAASHLYTYINGRFIRDRVVQHAILQAYRNFLERGRYPVVVLFIEV 290
Query: 208 PTRACDVNVTPDKRKVFFSDECSILHALREGLQE 241
DVNV P K +V F + I+H + +G E
Sbjct: 291 SPGEVDVNVHPTKHEVRFRQQ-GIVHDVIQGAVE 323
Score = 37 (18.1 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 1 MDVETPTNSPTIRPINKGVVHRICAGQVIKDL 32
+DV +R +G+VH + G V + L
Sbjct: 295 VDVNVHPTKHEVRFRQQGIVHDVIQGAVEETL 326
>TIGR_CMR|GSU_2001 [details] [associations]
symbol:GSU_2001 "DNA mismatch repair protein MutL"
species:243231 "Geobacter sulfurreducens PCA" [GO:0006298 "mismatch
repair" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_00149 InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0016887
GO:GO:0006298 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
eggNOG:COG0323 HSSP:P23367 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032300 HOGENOM:HOG000256550 KO:K03572
OMA:FLFINNR ProtClustDB:PRK00095 RefSeq:NP_953050.1
ProteinModelPortal:Q74BP0 GeneID:2688110 KEGG:gsu:GSU2001
PATRIC:22026863 BioCyc:GSUL243231:GH27-2035-MONOMER Uniprot:Q74BP0
Length = 606
Score = 192 (72.6 bits), Expect = 1.2e-27, Sum P(3) = 1.2e-27
Identities = 60/197 (30%), Positives = 96/197 (48%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQ---QPLLRPLKL 670
F + VIGQ+N +I+ + DL I+DQHAA E+ FERL + Q LL P +
Sbjct: 415 FSSLAVIGQYNASYILCQDGSDLVIIDQHAAHERVAFERLKTQFAAGRVEGQGLLFPETV 474
Query: 671 DLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIST 730
+L+ E V H + + GF LE+ G + +K +P ++ G + ++ L T
Sbjct: 475 ELSHRESAVVREHGGELGRLGFDLED----FGGTTWIVKGIP---RLLAGTDYLRLLRDT 527
Query: 731 LADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLAD 790
L + Q S+ +S + AD+V +L AC S + L E++ + H+
Sbjct: 528 LEELQ---SLGASRSI--ADAV-----EDILTRVACHSVVRGEHPLTTGEIEALFAHMDA 577
Query: 791 LNSPWNCPHGRPTMRHL 807
+ NCPHGRP ++ L
Sbjct: 578 TDFSTNCPHGRPVLQRL 594
Score = 125 (49.1 bits), Expect = 1.2e-27, Sum P(3) = 1.2e-27
Identities = 25/62 (40%), Positives = 42/62 (67%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR + + + ++I AG+V++ +S VKELVEN+LDAG I + ++ G ++ D+GCG
Sbjct: 5 IRILPEILTNKIAAGEVVERPASVVKELVENALDAGCGEIIVEIEGGGRRLIRITDDGCG 64
Query: 72 IS 73
+S
Sbjct: 65 MS 66
Score = 123 (48.4 bits), Expect = 1.2e-27, Sum P(3) = 1.2e-27
Identities = 39/154 (25%), Positives = 70/154 (45%)
Query: 89 ALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCK 148
AL VRF C + GK + + +L D + + G + + L PV + ++ +
Sbjct: 180 ALSRPEVRFTCVSD-GKTLFRAL-----DGTLLDRVAALLGKTVASALHPVDLA-TEGVR 232
Query: 149 VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSR-QYPIAIMNFIV 207
V G +++P R+ Y ++N R + V + + Y+ R +YP+ ++ V
Sbjct: 233 VTGLVARPDVS--RSAASHLYTYINGRFIRDRVVQHAILQAYRNFLERGRYPVVVLFIEV 290
Query: 208 PTRACDVNVTPDKRKVFFSDECSILHALREGLQE 241
DVNV P K +V F + I+H + +G E
Sbjct: 291 SPGEVDVNVHPTKHEVRFRQQ-GIVHDVIQGAVE 323
Score = 37 (18.1 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 1 MDVETPTNSPTIRPINKGVVHRICAGQVIKDL 32
+DV +R +G+VH + G V + L
Sbjct: 295 VDVNVHPTKHEVRFRQQGIVHDVIQGAVEETL 326
>TIGR_CMR|DET_1195 [details] [associations]
symbol:DET_1195 "DNA mismatch repair protein, MutL/HexB
family" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0006298 "mismatch repair" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_00149 InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
GO:GO:0006298 EMBL:CP000027 GenomeReviews:CP000027_GR
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
eggNOG:COG0323 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 KO:K03572 HOGENOM:HOG000256552 OMA:FLFINNR
RefSeq:YP_181908.1 ProteinModelPortal:Q3Z791 STRING:Q3Z791
GeneID:3229520 KEGG:det:DET1195 PATRIC:21609425
ProtClustDB:CLSK935583 BioCyc:DETH243164:GJNF-1196-MONOMER
Uniprot:Q3Z791
Length = 566
Score = 154 (59.3 bits), Expect = 4.5e-27, Sum P(3) = 4.5e-27
Identities = 30/61 (49%), Positives = 45/61 (73%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ ++K + RI AG+VI+ SS VKEL+ENSLDAGA +++ ++E G + +V D+GCG
Sbjct: 3 IKLLDKATIARIAAGEVIERPSSVVKELLENSLDAGAKRVDVVIREGGIGYIEVSDDGCG 62
Query: 72 I 72
I
Sbjct: 63 I 63
Score = 154 (59.3 bits), Expect = 4.5e-27, Sum P(3) = 4.5e-27
Identities = 46/169 (27%), Positives = 83/169 (49%)
Query: 78 KVRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLE 137
KV V L +YAL V+F + G+N L T G+ L+D ++ ++G ++ + +
Sbjct: 169 KVSEVVL--SYALAYPEVKFTLS-IDGRNT----LNTPGNGKLRDAVLEIYGNDVASKML 221
Query: 138 PVAI--CKSDSCKVEGFLSKPG-QGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGAN 194
+ +S + + G +S P S RN +FFVN R + + K + Y G
Sbjct: 222 DLETDSYRSSAINISGLVSPPEISRSNRN---SLHFFVNRRLIQSRALQKAAEQAYSGLL 278
Query: 195 S-RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEI 242
+YP+ ++N + DVN+ P K +V FSDE ++ A++ ++ +
Sbjct: 279 MVGRYPLGVINIWLDGALVDVNIHPTKAEVKFSDESAVFTAVQRAVRSV 327
Score = 128 (50.1 bits), Expect = 4.5e-27, Sum P(3) = 4.5e-27
Identities = 41/146 (28%), Positives = 71/146 (48%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERL-SQSTVLN-QQPLLRPLKLDLTP 674
++++GQ +++ + L+I+DQHAA E+ +E + SQ+ N +Q LL P L+L P
Sbjct: 384 LRLVGQIGGLYLLAEGPDGLYIIDQHAAHERIRYEEIASQTPSENARQSLLDPFILELNP 443
Query: 675 EEEVVASMHMDIIRKNGFSLEEDPHALAGLR-FRLKAVPFSKKITFGVEDVKDLISTLAD 733
+E + + GF +EE G R +R++++P F K L+S L D
Sbjct: 444 VQEAMIEKCKSELDLMGFEIEE-----FGRRVYRVQSIPAG----FTAPQAKALLSELVD 494
Query: 734 NQGECSIISSYKMDTADSVCPSRVRA 759
N + ++ C + VRA
Sbjct: 495 NPKDAPAEIKERLQRL-MACHTAVRA 519
Score = 94 (38.1 bits), Expect = 1.4e-23, Sum P(3) = 1.4e-23
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 754 PSRVRAMLAS-RACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTT 812
P+ ++ L AC +++ G L EM+++L L P +CPHGRPT+ +D
Sbjct: 500 PAEIKERLQRLMACHTAVRAGQVLNEAEMRELLLKLEKTAVPGHCPHGRPTIVK-IDFCQ 558
Query: 813 IRKN 816
+ K+
Sbjct: 559 LEKD 562
Score = 41 (19.5 bits), Expect = 5.3e-12, Sum P(3) = 5.3e-12
Identities = 15/51 (29%), Positives = 26/51 (50%)
Query: 696 EDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKM 746
ED +A++ L FR +A+P I V D++ L + + G +S +M
Sbjct: 84 EDIYAISSLGFRGEALP---SIA-AVADLEMLTAARTEESGTYLSLSGGEM 130
>UNIPROTKB|F1P0J4 [details] [associations]
symbol:PMS1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030983
"mismatched DNA binding" evidence=IEA] [GO:0006298 "mismatch
repair" evidence=IEA] InterPro:IPR009071 InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 Prosite:PS00058 Pfam:PF00505
GO:GO:0005524 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 OMA:PFFHHLT
GeneTree:ENSGT00530000063289 EMBL:AADN02034562 EMBL:AADN02034563
IPI:IPI00590399 PRIDE:F1P0J4 Ensembl:ENSGALT00000003701
Uniprot:F1P0J4
Length = 916
Score = 195 (73.7 bits), Expect = 1.8e-24, Sum P(3) = 1.8e-24
Identities = 58/201 (28%), Positives = 93/201 (46%)
Query: 90 LIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSD-SCK 148
LIA G+ T + K+V+ + S K ++V G + + P C D
Sbjct: 176 LIAYGIIKPELRITFVHNKAVIWQKNRVSDHKMACMSVLGTAVMGSMVPFQHCCEDPEIN 235
Query: 149 VEGFLSKPGQGSGR---NLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQYPIAIMNF 205
+ GFL K S + +R + FVN RPV ++ K + L + ++R YP+ +N
Sbjct: 236 LSGFLPKAESDSSLTSLSSSERSFIFVNSRPVHQKEILKYYSVLMQKDSTRLYPVFFLNI 295
Query: 206 IVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASYS--VNKVEQLIEPEK 263
VP A DVNVTPDK +V + S+L A+ L+ +Y P A+ S NK + + E
Sbjct: 296 TVPASAVDVNVTPDKTEVLLQYKESVLLAVENVLKSLYGPLPATVSGEANKTD--VTSED 353
Query: 264 SGPSSGAESCMFLEQLSPDGN 284
++ + + + P GN
Sbjct: 354 MFVHKAGQTDVVVNEKEPSGN 374
Score = 137 (53.3 bits), Expect = 1.8e-24, Sum P(3) = 1.8e-24
Identities = 30/71 (42%), Positives = 45/71 (63%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
++ ++ V + + QVI + S VKEL+ENSLDA AT+I+I L+ YG + +V DNG G
Sbjct: 1 MKQLSAETVRLLSSSQVITSVVSVVKELIENSLDASATTIDIRLENYGFDKIEVRDNGNG 60
Query: 72 ISPNNFKVRAV 82
I + V A+
Sbjct: 61 IKVADVPVMAI 71
Score = 85 (35.0 bits), Expect = 1.8e-24, Sum P(3) = 1.8e-24
Identities = 43/195 (22%), Positives = 82/195 (42%)
Query: 633 DQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLD--LTPEE---EVVASMHMDII 687
++ L +++ + +E +RL + L + L +P+ L L E +V+ M D
Sbjct: 723 EKKLMLLNPYRLEEALLRKRLLMNHKLPVEKLEKPVVLSDSLLGESHYMDVLHKMQKDYQ 782
Query: 688 RKNGFSLEEDPHALAGLRFRLKAVPFSKKIT--FGVEDVKDLISTLADNQGECSIISSYK 745
NG S DP +A F++K + + +E + + +S + + I+++
Sbjct: 783 GLNGLSYLSDPRLVAN-GFQIKVIEGASATESHMEIEGMANCLSYYGISDLK-EILNAVV 840
Query: 746 MDTADSV--C-PSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWN--CPHG 800
A V C P +V L A R + + L + +++ + + N C HG
Sbjct: 841 NRNAKEVYECRPLKVINYLEGEAVRLARQLPLHLSKEDVENTIYRMKQQLGKENKGCVHG 900
Query: 801 RPTMRHLVDLTTIRK 815
RP HL D+ + K
Sbjct: 901 RPFFHHLTDIPEVNK 915
Score = 64 (27.6 bits), Expect = 9.3e-11, Sum P(3) = 9.3e-11
Identities = 49/241 (20%), Positives = 88/241 (36%)
Query: 344 KFNCMKLIGP----HNVPTEENCPSPSRVMAKNITEDGESDSRSRCIQSSLNKFVTVSKR 399
K CM ++G VP + C P + ESDS + SS F+ V+
Sbjct: 207 KMACMSVLGTAVMGSMVPFQHCCEDPE-INLSGFLPKAESDSSLTSLSSSERSFIFVN-- 263
Query: 400 KYESIARPLTEMPLLRNQSLHCQMKKSNSDMDAVDTRSPVRRHLVDDIAKLNKIEPFKCN 459
+RP+ + +L+ S+ Q K S V VD +K E
Sbjct: 264 -----SRPVHQKEILKYYSVLMQ-KDSTRLYPVFFLNITVPASAVDVNVTPDKTEVLLQY 317
Query: 460 KADKVSKEIENILSS-EGN-----TNEKPREELVTQEKATPLLNVPSIVSSSNDLKKNSE 513
K + V +EN+L S G + E + ++ +++ +V + + N+
Sbjct: 318 K-ESVLLAVENVLKSLYGPLPATVSGEANKTDVTSEDMFVHKAGQTDVVVNEKEPSGNN- 375
Query: 514 DLSVAASHLQFSGSILDAPVPSSSLDICSTLQFSIQDLRKRRQQRLSIMQSSCHTSGSVK 573
DL S L F+ + ++ +IC Q D + ++ GS++
Sbjct: 376 DLHAHTSFLSFNSDVQSYQAGKNT-EICLNHQIFSGDTVHSCLEEKEASKNDAFQEGSLR 434
Query: 574 M 574
+
Sbjct: 435 L 435
Score = 37 (18.1 bits), Expect = 4.8e-08, Sum P(3) = 4.8e-08
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 129 GMNIYNCLEPVAICKSDSCKVEGFL 153
G +++CLE K+D+ + EG L
Sbjct: 410 GDTVHSCLEEKEASKNDAFQ-EGSL 433
>UNIPROTKB|E2RAQ2 [details] [associations]
symbol:PMS1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0030983 "mismatched DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR009071 InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 Prosite:PS00058 Pfam:PF00505
GO:GO:0005524 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 CTD:5378 KO:K10864 OMA:PFFHHLT
GeneTree:ENSGT00530000063289 EMBL:AAEX03017899 RefSeq:XP_536002.1
Ensembl:ENSCAFT00000014945 GeneID:478840 KEGG:cfa:478840
Uniprot:E2RAQ2
Length = 930
Score = 168 (64.2 bits), Expect = 3.1e-24, Sum P(4) = 3.1e-24
Identities = 55/188 (29%), Positives = 86/188 (45%)
Query: 108 KSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDS-CKVEGFLSKPG-QGSGRNLG 165
K+V+ + S + + V G + +EP DS + GFL K S +L
Sbjct: 194 KAVIWQKTRVSDRQVALRAVLGTAVMGNMEPFQYHPEDSQIYLSGFLPKHDVDHSSTSLS 253
Query: 166 --DRQYFFVNDRPVDLPKVSKLVNELY-----KGANSRQYPIAIMNFIVPTRACDVNVTP 218
+R + F+N+RPV + KL+ Y K A SR YPI + VPT DVN+TP
Sbjct: 254 TPERSFIFINNRPVHQKDILKLIRHYYNLKCLKEA-SRLYPIFFLKIDVPTADVDVNITP 312
Query: 219 DKRKVFFSDECSILHALREGLQEIYS--PNNASYSVNKVEQLIEPEKSGPSSGAESCMFL 276
DK +V ++ ++L AL + Y P+ SY NK + + S+ E+ +
Sbjct: 313 DKSQVLIQNKEAVLIALENLMTTCYGSLPSTNSYENNKTD--VSSADMVVSNTTETDVLF 370
Query: 277 EQLSPDGN 284
++ GN
Sbjct: 371 NKMESSGN 378
Score = 140 (54.3 bits), Expect = 3.1e-24, Sum P(4) = 3.1e-24
Identities = 31/71 (43%), Positives = 45/71 (63%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
++ + V + + Q+I + S VKEL+ENSLDAGATSI++ L+ YG + +V DNG G
Sbjct: 1 MKQLPAATVRLLSSSQIITSVVSVVKELLENSLDAGATSIDVKLENYGFDKIEVRDNGEG 60
Query: 72 ISPNNFKVRAV 82
I + V AV
Sbjct: 61 IKAIDAPVMAV 71
Score = 101 (40.6 bits), Expect = 3.1e-24, Sum P(4) = 3.1e-24
Identities = 45/188 (23%), Positives = 83/188 (44%)
Query: 635 DLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEE-----EVVASMHMDIIRK 689
++ +++ + +E F+RL ++ L QPL +P+ L + E++ M D R
Sbjct: 741 EVMLLNPYRVEEALLFKRLIENHKLPAQPLEKPIILTESLFNGSHYLEMLCKMTTDDQRY 800
Query: 690 NGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLA--DNQGECSIISSYKMD 747
+G + DP A F++K +P I +++++ + L I+++
Sbjct: 801 SGSTYLSDPRLTAN-GFKIKWIP-GVSIAEDYLEIEEMANCLPFYGVMDLKEILNAILNK 858
Query: 748 TADSV--C-PSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADL--NSPWNCPHGRP 802
A V C P +V + L A R S + L + ++Q I+ + D + C HGRP
Sbjct: 859 NAKEVYECRPRKVISYLEGEAVRLSRQLPMYLSKEDVQDIIYRMKDQFGSEIKECVHGRP 918
Query: 803 TMRHLVDL 810
HL L
Sbjct: 919 FFHHLTHL 926
Score = 51 (23.0 bits), Expect = 3.1e-24, Sum P(4) = 3.1e-24
Identities = 50/225 (22%), Positives = 98/225 (43%)
Query: 296 SKGNTPKTVEVDTLHSDALEGLVHSSNENGKGNFTLKAHDDKSADRLSKFNCMKLIGPHN 355
SKGNT K + + + ++ LV + K N A+ LS+ +C K +
Sbjct: 499 SKGNTLKNSMGENI--EPVKILVPQESSACKQNNN--AYPSPELKNLSESSCSKK--SNV 552
Query: 356 VPTEENCPSPSRVMAKNITEDGESDSRSRCIQSSLNKFVTV-SKRKYESIARPLTEM--P 412
V + + +++ + + S S + +Q +F+T SK E + E+
Sbjct: 553 VDNKSGQLTAYDLISSRVVKKPMSAS-ALFVQDHRAQFLTENSKTSLEDATVQIEELWKT 611
Query: 413 LLRNQSLHCQMKKSNSDMDAVDTRSPVRRHLVDD--IAKLN---KIEPFKC-NKADKVSK 466
L + L + +K+ D++ + + ++R + + I+ + KI+P N A K
Sbjct: 612 LSEEEKLKYE-EKATKDLERYNRQ--IKRAIEQESQISLKDGRKKIKPTSAWNLAQK--H 666
Query: 467 EIENILSSEGNTNEKPREELVTQEKATPLLNVPSIVSSSNDLKKN 511
+++ LS++ +E + + EK T + V I S +LKKN
Sbjct: 667 KLKTSLSNQPKLDELFQSHI---EKKTQNIKVVQIPFSMENLKKN 708
>ZFIN|ZDB-GENE-030616-528 [details] [associations]
symbol:pms1 "PMS1 postmeiotic segregation increased
1 (S. cerevisiae)" species:7955 "Danio rerio" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006298 "mismatch repair"
evidence=IEA;IBA] [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0032389 "MutLalpha complex" evidence=IBA]
[GO:0016887 "ATPase activity" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0032300 "mismatch repair
complex" evidence=IBA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IBA] [GO:0032407 "MutSalpha complex
binding" evidence=IBA] InterPro:IPR009071 InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 Prosite:PS00058 Pfam:PF00505
ZFIN:ZDB-GENE-030616-528 GO:GO:0005524 GO:GO:0016887
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0006298 GO:GO:0003697 EMBL:AL672217 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407
GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 HSSP:P54278 CTD:5378 HOVERGEN:HBG031886
KO:K10864 IPI:IPI00868181 RefSeq:NP_958476.2 UniGene:Dr.85558
ProteinModelPortal:Q8JFR9 STRING:Q8JFR9 GeneID:368631
KEGG:dre:368631 InParanoid:Q8JFR9 NextBio:20813079
ArrayExpress:Q8JFR9 Uniprot:Q8JFR9
Length = 896
Score = 195 (73.7 bits), Expect = 3.3e-24, Sum P(3) = 3.3e-24
Identities = 93/382 (24%), Positives = 167/382 (43%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGM-NIYNCLEPVAIC 142
L AYA+I +R T N K+VV + S + ++ V G ++ N L
Sbjct: 175 LLMAYAVIKPELRV----TLSHN-KAVVWQKSRVSDHRTALMAVLGAASVANMLPVQHHQ 229
Query: 143 KSDSCKVEGFLSKPGQ---GSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANS---- 195
+ ++GF KPG + + D+ + FVN RPV ++ KL+ + Y A S
Sbjct: 230 EQPEITIDGFFPKPGSDLNSTSSSTTDKSFIFVNSRPVHHKEILKLIKQYYTSAQSNSES 289
Query: 196 --RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASYSVN 253
R+YP +MN +P DVN+TPDK +V ++ +L ++ L +Y +N ++
Sbjct: 290 VSRRYPTFMMNITIPASTVDVNLTPDKTEVMLQNKDEVLLSVETMLISLYGYSNGEENLK 349
Query: 254 K------VEQLIEPEKSGPSSGAESCMFLEQLSPDG---NGCIEILNEQQISKGNTPKT- 303
V L EP+++ P + E S + +G + + N S + +
Sbjct: 350 TAGNPPDVTSLDEPKRTSPDISLKHPELPEDSSSNAEKQDGELSLSNTANTSSSSISEDW 409
Query: 304 ----VEVDTLH-SDALEGLVHSSNENGKGNFTLKAHDDKSAD-RLSKFNCMKLIGPHNVP 357
++D+++ S ++ +V +S + N + D + ++S N N
Sbjct: 410 VINRSDLDSINCSVPVDDVVMNSTADLNSNSPKASESDSGPESQISAENWSAGRVFSNQI 469
Query: 358 TEENCPSPSRVMAKNITEDGESDSRSRCIQSSLNKFVTVSKRKYESIARPLTEMPLLRNQ 417
T E + K I + G ++++S ++SS +K S E +A+ LT L+ N+
Sbjct: 470 TGEYLEPVKLHIPKAIEDLGGTEAKS--VKSSPSK--KPSNVIVEKMAK-LTAYELISNR 524
Query: 418 SLHCQMKKSNSDMDAVDTRSPV 439
S+ + S + DTRS V
Sbjct: 525 SV--RQPSSAFSLFEQDTRSQV 544
Score = 151 (58.2 bits), Expect = 3.3e-24, Sum P(3) = 3.3e-24
Identities = 30/63 (47%), Positives = 43/63 (68%)
Query: 20 VHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFKV 79
V +C+ QVI + + VKEL+ENSLDAG++S+E+ L+ YG + +V DNG GI + V
Sbjct: 9 VRLLCSSQVITSVLNVVKELIENSLDAGSSSLEVKLENYGLDRIEVRDNGSGIKATDVSV 68
Query: 80 RAV 82
AV
Sbjct: 69 MAV 71
Score = 68 (29.0 bits), Expect = 3.3e-24, Sum P(3) = 3.3e-24
Identities = 48/188 (25%), Positives = 78/188 (41%)
Query: 636 LFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKL-DLT---PEE-EVVASMHMDIIRKN 690
L +++ +E F+RL + +L L P+ L D PE +V+ +M D N
Sbjct: 697 LMLLNPFRVEEALLFKRLLEDNILPTVRLQTPVLLTDGVLGGPEYMDVLLNMKKDGPEFN 756
Query: 691 GFSLEEDPHALA-GLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTA 749
G DP +A G R+ + P S + V + D + I+ + K A
Sbjct: 757 GDISLTDPRLVANGFEIRMISGPQSSERHVEVMGMADCMPFFGIGDLR-EILQAIKARGA 815
Query: 750 DSV--C-PSRVRAMLASRACRSSIMIGDALGR----NEMQKILEHLADLNSPWNCPHGRP 802
+V C P +V L S A R + + +L R N + ++ + L D + C H P
Sbjct: 816 KTVAQCRPRKVSHYLESEAVRLARQLPLSLSRADVTNTLCRMQQELQDESQV--CIHRLP 873
Query: 803 TMRHLVDL 810
+LV L
Sbjct: 874 FFHNLVTL 881
Score = 57 (25.1 bits), Expect = 7.4e-10, Sum P(3) = 7.4e-10
Identities = 19/78 (24%), Positives = 40/78 (51%)
Query: 426 SNSDMDAVDTRSPVRRHLVDDIAKLNKIEPFKCNKADKVSKEIENILSSEGNTNEKPREE 485
+ SD+D+++ PV +++ A LN P K +++D E+ +S+E + +
Sbjct: 412 NRSDLDSINCSVPVDDVVMNSTADLNSNSP-KASESDSGP---ESQISAENWSAGRVFSN 467
Query: 486 LVTQEKATPL-LNVPSIV 502
+T E P+ L++P +
Sbjct: 468 QITGEYLEPVKLHIPKAI 485
Score = 50 (22.7 bits), Expect = 3.8e-09, Sum P(3) = 3.8e-09
Identities = 25/93 (26%), Positives = 44/93 (47%)
Query: 387 QSSLNKFVTV---SKRKYESIARPLTEMPLLRNQSLHCQMKKSNSDMDAVDTRSPVRRH- 442
Q +L+K + SKR I++PL QSL+ ++S+S + + + + H
Sbjct: 628 QQALDKLFSSQPSSKRSPAKISKPLPFTIATLKQSLNLLSEQSSSSVQGLRLVNRLASHG 687
Query: 443 --LVDDIAKLNKIEPFKCNKADKVSKEIE-NIL 472
+V KL + PF+ +A + +E NIL
Sbjct: 688 AWVVLCGRKLMLLNPFRVEEALLFKRLLEDNIL 720
>UNIPROTKB|F1MW63 [details] [associations]
symbol:PMS1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006298 "mismatch repair" evidence=IEA] [GO:0030983
"mismatched DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR009071 InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 Prosite:PS00058 Pfam:PF00505
GO:GO:0005524 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 OMA:PFFHHLT
GeneTree:ENSGT00530000063289 EMBL:DAAA02003905 EMBL:DAAA02003906
EMBL:DAAA02003907 IPI:IPI00702663 UniGene:Bt.20671
Ensembl:ENSBTAT00000025019 Uniprot:F1MW63
Length = 932
Score = 174 (66.3 bits), Expect = 4.6e-24, Sum P(4) = 4.6e-24
Identities = 56/208 (26%), Positives = 93/208 (44%)
Query: 87 AYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAI-CKSD 145
+Y ++ VR V + K+++ + S K +++V G + +E C+
Sbjct: 178 SYGILKPDVRIVFIHN-----KAIIWQKTRVSDHKMALMSVLGTTVMGNMESFQYHCEES 232
Query: 146 SCKVEGFLSK-PGQGSGRNLG--DRQYFFVNDRPVDLPKVSKLVNELYK----GANSRQY 198
+ GFL K S +L +R + F+N RPV + KL+ Y ++R Y
Sbjct: 233 QIFLSGFLPKHDADHSCTSLSTPERSFIFINSRPVHQKDILKLIRHYYNLKCLKESTRLY 292
Query: 199 PIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYS--PNNASYSVNKVE 256
PI + VPT DVN+TPDK +V ++ S+L AL + Y P+ SY NK +
Sbjct: 293 PIFFLKIDVPTADVDVNLTPDKSQVLLQNKESVLIALENLMTTRYGSLPSTNSYESNKTD 352
Query: 257 QLIEPEKSGPSSGAESCMFLEQLSPDGN 284
+ S E+ + L ++ GN
Sbjct: 353 --VSSADMVVSKTTETDVLLTKMETSGN 378
Score = 138 (53.6 bits), Expect = 4.6e-24, Sum P(4) = 4.6e-24
Identities = 31/71 (43%), Positives = 45/71 (63%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
++ ++ V + + QVI + S VKEL+ENSLDA ATSI++ L+ YG + +V DNG G
Sbjct: 1 MKQLSAATVRLLSSSQVITSVVSVVKELIENSLDARATSIDVKLENYGFDKIEVRDNGEG 60
Query: 72 ISPNNFKVRAV 82
I + V AV
Sbjct: 61 IKAIDAPVMAV 71
Score = 100 (40.3 bits), Expect = 4.6e-24, Sum P(4) = 4.6e-24
Identities = 45/188 (23%), Positives = 81/188 (43%)
Query: 635 DLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEE-----EVVASMHMDIIRK 689
++ +++ + +E F+RL ++ L +PL +P+ L + E++ M D R
Sbjct: 743 EIMLLNSYRVEEALLFKRLLENHKLPAEPLEKPIILTESLFNGSHYLEILHKMTADDQRY 802
Query: 690 NGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLA--DNQGECSIISSYKMD 747
+G DP A F++K +P I+ +++ + + L I+++
Sbjct: 803 SGSIYLSDPRLTAN-GFKIKLIP-GVSISENSLEIEGMANCLPFYGVMDLKEILNAILNK 860
Query: 748 TADSV--C-PSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADL--NSPWNCPHGRP 802
A V C P +V + L A R S + L + +MQ I+ + N C HGRP
Sbjct: 861 NAKEVYECRPRKVISYLEGEAVRLSRQLPMYLSKEDMQDIIYRMKHQFRNEITQCVHGRP 920
Query: 803 TMRHLVDL 810
HL L
Sbjct: 921 FFHHLTHL 928
Score = 46 (21.3 bits), Expect = 4.6e-24, Sum P(4) = 4.6e-24
Identities = 23/84 (27%), Positives = 35/84 (41%)
Query: 462 DKVSKEIENILSSEGNT-NEKPREELV---TQEKATPLLNVPSIVSSSNDLKKNSEDLSV 517
D + E +I ++GN E P + TQEK +V S+ + ++ N
Sbjct: 419 DYFNSENSSIDKNDGNAFKEIPENKSSCEDTQEKNGETWSVDSVGQAQSE---NGNK--- 472
Query: 518 AASHLQFSGSILDAPVPSSSLDIC 541
H SG +A VP S +IC
Sbjct: 473 --GHRDESGENEEAAVPEKSAEIC 494
>UNIPROTKB|P54277 [details] [associations]
symbol:PMS1 "PMS1 protein homolog 1" species:9606 "Homo
sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030983
"mismatched DNA binding" evidence=IEA] [GO:0003697 "single-stranded
DNA binding" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032407 "MutSalpha complex
binding" evidence=IBA] [GO:0003677 "DNA binding" evidence=TAS]
[GO:0005634 "nucleus" evidence=TAS] [GO:0006200 "ATP catabolic
process" evidence=IBA] InterPro:IPR009071 InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 Pfam:PF02518 SMART:SM00387 Prosite:PS00058
Pfam:PF00505 GO:GO:0005524 GO:GO:0016887 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0006298
EMBL:CH471058 GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874
EMBL:AC013468 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407
Orphanet:144 eggNOG:COG0323 GO:GO:0032389 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 EMBL:U13695 EMBL:AB102870
EMBL:AB102875 EMBL:AY267352 EMBL:AC008122 EMBL:BC096330
EMBL:BC096332 IPI:IPI00005541 IPI:IPI00654710 IPI:IPI00896518
PIR:S47597 RefSeq:NP_000525.1 RefSeq:NP_001121615.1
RefSeq:NP_001121616.1 UniGene:Hs.111749 PDB:2CS1 PDBsum:2CS1
ProteinModelPortal:P54277 SMR:P54277 IntAct:P54277 STRING:P54277
PhosphoSite:P54277 DMDM:1709683 PaxDb:P54277 PRIDE:P54277
DNASU:5378 Ensembl:ENST00000409823 Ensembl:ENST00000441310
Ensembl:ENST00000447232 GeneID:5378 KEGG:hsa:5378 UCSC:uc002urh.4
CTD:5378 GeneCards:GC02P190648 H-InvDB:HIX0029784 HGNC:HGNC:9121
HPA:CAB010233 MIM:600258 neXtProt:NX_P54277 PharmGKB:PA33447
HOGENOM:HOG000039972 HOVERGEN:HBG031886 InParanoid:P54277 KO:K10864
OMA:PFFHHLT OrthoDB:EOG41C6VK PhylomeDB:P54277 ChiTaRS:PMS1
EvolutionaryTrace:P54277 GenomeRNAi:5378 NextBio:20866
ArrayExpress:P54277 Bgee:P54277 CleanEx:HS_PMS1
Genevestigator:P54277 GermOnline:ENSG00000064933 Uniprot:P54277
Length = 932
Score = 165 (63.1 bits), Expect = 7.8e-23, Sum P(3) = 7.8e-23
Identities = 82/343 (23%), Positives = 141/343 (41%)
Query: 108 KSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDS-CKVEGFLSK-PGQGSGRNLG 165
K+V+ + S K +++V G + N +E +S + GFL K S +L
Sbjct: 194 KAVIWQKSRVSDHKMALMSVLGTAVMNNMESFQYHSEESQIYLSGFLPKCDADHSFTSLS 253
Query: 166 --DRQYFFVNDRPVDLPKVSKLVNELYK----GANSRQYPIAIMNFIVPTRACDVNVTPD 219
+R + F+N RPV + KL+ Y ++R YP+ + VPT DVN+TPD
Sbjct: 254 TPERSFIFINSRPVHQKDILKLIRHHYNLKCLKESTRLYPVFFLKIDVPTADVDVNLTPD 313
Query: 220 KRKVFFSDECSILHALREGLQEIYSP--NNASYSVNKVEQLIEPEKSGPSSGAESCMFLE 277
K +V ++ S+L AL + Y P + SY NK + + S AE+ +
Sbjct: 314 KSQVLLQNKESVLIALENLMTTCYGPLPSTNSYENNKTD--VSAADIVLSKTAETDVLFN 371
Query: 278 QLSPDGNGCIEILNEQQISKGNTPKTVEVDTLHSDALEGLVHSSNENGKGNFTLKAHD-D 336
++ G + + I N E D L + S + G G+ + + + D
Sbjct: 372 KVESSGKNYSNV-DTSVIPFQNDMHNDESGKNTDDCLNHQI-SIGDFGYGHCSSEISNID 429
Query: 337 KSADRLSKFNCMKLIGPHNVPTE--ENC--PSPSRVMAKN-----ITEDGESDSRSRCIQ 387
K+ + M + N TE + C S ++N I E GE++ +
Sbjct: 430 KNTKNAFQDISMSNVSWENSQTEYSKTCFISSVKHTQSENGNKDHIDESGENEEEAGLEN 489
Query: 388 SSLNKFVTVSKRKY--ESIARPLTEMPLL-RNQSLHCQMKKSN 427
SS S+ S+ + + +L +SL C++ +N
Sbjct: 490 SSEISADEWSRGNILKNSVGENIEPVKILVPEKSLPCKVSNNN 532
Score = 138 (53.6 bits), Expect = 7.8e-23, Sum P(3) = 7.8e-23
Identities = 29/71 (40%), Positives = 45/71 (63%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
++ + V + + Q+I + S VKEL+ENSLDAGATS+++ L+ YG + +V DNG G
Sbjct: 1 MKQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSVDVKLENYGFDKIEVRDNGEG 60
Query: 72 ISPNNFKVRAV 82
I + V A+
Sbjct: 61 IKAVDAPVMAM 71
Score = 100 (40.3 bits), Expect = 7.8e-23, Sum P(3) = 7.8e-23
Identities = 44/188 (23%), Positives = 81/188 (43%)
Query: 635 DLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEE-----EVVASMHMDIIRK 689
++ +++ + +E F+RL ++ L +PL +P+ L + +V+ M D R
Sbjct: 743 EVMLLNPYRVEEALLFKRLLENHKLPAEPLEKPIMLTESLFNGSHYLDVLYKMTADDQRY 802
Query: 690 NGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTL-----ADNQGECSIISSY 744
+G + DP A F++K +P IT +++ + + L AD + + I +
Sbjct: 803 SGSTYLSDPRLTAN-GFKIKLIP-GVSITENYLEIEGMANCLPFYGVADLKEILNAILNR 860
Query: 745 KMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADL--NSPWNCPHGRP 802
P +V + L A R S + L + ++Q I+ + N C HGRP
Sbjct: 861 NAKEVYECRPRKVISYLEGEAVRLSRQLPMYLSKEDIQDIIYRMKHQFGNEIKECVHGRP 920
Query: 803 TMRHLVDL 810
HL L
Sbjct: 921 FFHHLTYL 928
>TIGR_CMR|NSE_0609 [details] [associations]
symbol:NSE_0609 "DNA mismatch repair protein, MutL/HexB
family" species:222891 "Neorickettsia sennetsu str. Miyayama"
[GO:0006298 "mismatch repair" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_00149 InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:CP000237 GenomeReviews:CP000237_GR
eggNOG:COG0323 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 HOGENOM:HOG000256550 KO:K03572 OMA:FLFINNR
RefSeq:YP_506489.1 ProteinModelPortal:Q2GDF7 STRING:Q2GDF7
GeneID:3931746 KEGG:nse:NSE_0609 PATRIC:22681251
ProtClustDB:CLSK2527761 BioCyc:NSEN222891:GHFU-625-MONOMER
Uniprot:Q2GDF7
Length = 652
Score = 153 (58.9 bits), Expect = 2.1e-22, Sum P(4) = 2.1e-22
Identities = 30/62 (48%), Positives = 47/62 (75%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I PI ++++I AG++++ ++AVKELVEN++DAG+TSI++ L+E G +V DNG G
Sbjct: 5 ILPIE--IINKIAAGEILEKPANAVKELVENAIDAGSTSIKVELEEVGRNLIRVTDNGVG 62
Query: 72 IS 73
IS
Sbjct: 63 IS 64
Score = 104 (41.7 bits), Expect = 2.1e-22, Sum P(4) = 2.1e-22
Identities = 56/216 (25%), Positives = 85/216 (39%)
Query: 150 EGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQ-YPIAIMNFIVP 208
E FL P RN FVN RPV +S ++ Y + YPIA++ V
Sbjct: 228 ELFLGLPTLTQKRN---NCLIFVNGRPVKDSVISSVMRHAYNDYIPKNTYPIAVIFIRVH 284
Query: 209 TRACDVNVTPDKRKVFFSDECSILHAL-----REGLQ--EIYSPNNASYSVNKVEQLIEP 261
DVN+ P+K +V F D I L R LQ S A +V + QL++
Sbjct: 285 NNEVDVNIHPNKSEVKFRDPQVIRRFLLSVSSRSLLQCGRSTSTTVADRAVEQFNQLLKK 344
Query: 262 E----KSGPSSGAESCMFLEQLSPDGNGCIEILNEQQISKGNTPKTVEVDTLHSDALEGL 317
+ K S ES F SP I+ +++ + + ++ D + ++ G
Sbjct: 345 QTAFRKETVSKTTESGFFQ---SPKAKKAID-QSQEYAKQFEGKRNLDFDQMQNN--NGP 398
Query: 318 VHSSNENGKGNFTLKAHDDKSADRLSKFNCMKLIGP 353
H S + + L +H S D +K K P
Sbjct: 399 FHFSTDQSEEALPLMSHKKTSEDYSNKLPLEKQQSP 434
Score = 103 (41.3 bits), Expect = 2.1e-22, Sum P(4) = 2.1e-22
Identities = 33/120 (27%), Positives = 60/120 (50%)
Query: 612 EDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLD 671
E FG+ K Q + FII + + ++ I+DQHAA E+ +E++ +S Q LL +
Sbjct: 467 ETFGKFKC--QVHGTFIITETENEMIIIDQHAAHERILYEQMKKSITSPGQNLLTAEFVP 524
Query: 672 LTPEEEVVASMHMDIIRKNGFSLEEDPHALA---GLRFRLKAVPFSKKITFGVEDVKDLI 728
L+ + + S +++ +++ G +E H L K VP ++ I ED+ L+
Sbjct: 525 LSEKAVEILSFNVEKLKEIGLVVERVSHCAVMVNSLPEAFKNVPTNELI----EDIASLL 580
Score = 75 (31.5 bits), Expect = 2.1e-22, Sum P(4) = 2.1e-22
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 762 ASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPT 803
A+ AC+ +I L R E++++L + D+ C HGRPT
Sbjct: 595 ANIACKRAIKANHNLTREEIEELLTLMEDIPHTGQCNHGRPT 636
>UNIPROTKB|A9WJ86 [details] [associations]
symbol:mutL "DNA mismatch repair protein MutL"
species:324602 "Chloroflexus aurantiacus J-10-fl" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] HAMAP:MF_00149
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 InterPro:IPR020667
Pfam:PF01119 Pfam:PF02518 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:CP000909 GenomeReviews:CP000909_GR
eggNOG:COG0323 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032300 KO:K03572 HOGENOM:HOG000256552
OMA:ATMACHA RefSeq:YP_001634752.1 ProteinModelPortal:A9WJ86
STRING:A9WJ86 GeneID:5825934 KEGG:cau:Caur_1133 PATRIC:21413049
ProtClustDB:CLSK975399 BioCyc:CAUR324602:GIXU-1150-MONOMER
Uniprot:A9WJ86
Length = 624
Score = 167 (63.8 bits), Expect = 3.9e-22, Sum P(3) = 3.9e-22
Identities = 55/193 (28%), Positives = 91/193 (47%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQ--QPLLRPLKLDLTP 674
++V+GQ L +I+ + + ++++DQHAA E+ +E+L +NQ Q + +L L P
Sbjct: 437 LRVVGQVGLTYIVAEAPEGMYLIDQHAAHERITYEKL-----MNQYAQHAVESQQL-LIP 490
Query: 675 EEEVVASMHMDIIRKNGFSLEEDPHALA--GLRFRLKAVPFSKKITFGVEDVKDLISTLA 732
+ V+ ++ N L E L G ++A+P T +++ I +A
Sbjct: 491 QAVEVSPEASALLLGNAERLAEWGFVLEPWGTGVLVRAIP----ATLPTDELTQAIHEIA 546
Query: 733 DNQGECSIISSYKMDTADSVCPSRVR-AMLASRACRSSIMIGDALGRNEMQKILEHLADL 791
+ K+ P R AML + AC +S+ G L EM+++L L
Sbjct: 547 E-----------KLAGRGGSDPLEWREAMLITLACHTSVRAGQPLSHEEMRQLLRQLEQC 595
Query: 792 NSPWNCPHGRPTM 804
SP CPHGRPTM
Sbjct: 596 VSPRTCPHGRPTM 608
Score = 124 (48.7 bits), Expect = 3.9e-22, Sum P(3) = 3.9e-22
Identities = 26/68 (38%), Positives = 45/68 (66%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR +++ + +I AG+V++ +S VKEL+EN++DAGA I I ++ G +V D+GCG
Sbjct: 3 IRLLDETIAAQIAAGEVVERPASVVKELLENAIDAGAQRIVIEVRGGGLREIRVQDDGCG 62
Query: 72 ISPNNFKV 79
I + ++
Sbjct: 63 IPADEIEL 70
Score = 98 (39.6 bits), Expect = 3.9e-22, Sum P(3) = 3.9e-22
Identities = 49/167 (29%), Positives = 75/167 (44%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV-AIC 142
+ Q YAL V F G+ + L+T G L+ ++ ++G+ + L PV A
Sbjct: 173 IVQQYALAYPEVSFSLL-IDGR----MALQTSGDGDLRTVVVELYGLEVGRALLPVQAEA 227
Query: 143 KSDSC--KVEGFLSKPG-QGSGRNLGDRQYFFVNDRPVDLPK--VSKLVNELYKGANSR- 196
D V G +S P S RN F N R + P+ ++ +V Y +
Sbjct: 228 GVDETWVAVNGLISPPELTRSSRNYLS---LFANRRALQ-PRGALAAVVENAYHTMLMKG 283
Query: 197 QYPIAIMNFIVPTRACDVNVTPDKRKVFFSDEC---SIL-HALREGL 239
++PIAI++ V A DVNV P K +V F S+L A+R+ L
Sbjct: 284 RFPIAILDVRVHPAAIDVNVHPTKSEVKFRYAAHVHSVLGRAIRDAL 330
Score = 44 (20.5 bits), Expect = 1.4e-16, Sum P(3) = 1.4e-16
Identities = 20/84 (23%), Positives = 31/84 (36%)
Query: 255 VEQLIEPEKSGPSSGAESCMFLEQ--LSPDGN--GCIEILNEQQISKGNTPKTVEVDTLH 310
V LI P + SS +F + L P G +E + KG P + +H
Sbjct: 236 VNGLISPPELTRSSRNYLSLFANRRALQPRGALAAVVENAYHTMLMKGRFPIAILDVRVH 295
Query: 311 SDALEGLVHSSNENGKGNFTLKAH 334
A++ VH + K + H
Sbjct: 296 PAAIDVNVHPTKSEVKFRYAAHVH 319
>UNIPROTKB|F1SN54 [details] [associations]
symbol:PMS1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006298 "mismatch repair" evidence=IEA] [GO:0030983
"mismatched DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR009071 InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 Prosite:PS00058 Pfam:PF00505
GO:GO:0005524 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 OMA:PFFHHLT
GeneTree:ENSGT00530000063289 EMBL:CU467085 EMBL:CU582834
Ensembl:ENSSSCT00000017470 Uniprot:F1SN54
Length = 922
Score = 151 (58.2 bits), Expect = 9.5e-22, Sum P(3) = 9.5e-22
Identities = 50/180 (27%), Positives = 82/180 (45%)
Query: 87 AYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDS 146
+Y ++ VR V + K+++ + S K +++V G + +E +S
Sbjct: 178 SYGVLKPEVRLVFIHN-----KAIIWQKTRVSDHKMALMSVLGTAVMGNMEAFQYHSEES 232
Query: 147 -CKVEGFLSKPGQG-SGRNLG--DRQYFFVNDRPVDLPKVSKLVNELYK----GANSRQY 198
+ GFL K S +L +R + F+N RPV + KL+ Y +R Y
Sbjct: 233 QIYLSGFLPKHNADHSVTSLSTPERSFIFINSRPVHQKDILKLIRHYYNLKCLKETTRLY 292
Query: 199 PIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYS--PNNASYSVNKVE 256
PI + VPT DVN+TPDK +V ++ S+L AL + Y P+ SY +K +
Sbjct: 293 PIFFLKIDVPTVDVDVNLTPDKSQVLLQNKESVLIALENLMTTCYGSLPSTNSYESDKTD 352
Score = 142 (55.0 bits), Expect = 9.5e-22, Sum P(3) = 9.5e-22
Identities = 31/71 (43%), Positives = 45/71 (63%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
++ + V + + Q+I + S VKEL+ENSLDAGATSI++ L+ YG + +V DNG G
Sbjct: 1 MKQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSIDVKLENYGFDKIEVRDNGEG 60
Query: 72 ISPNNFKVRAV 82
I + V AV
Sbjct: 61 IKAVDAPVMAV 71
Score = 100 (40.3 bits), Expect = 9.5e-22, Sum P(3) = 9.5e-22
Identities = 44/188 (23%), Positives = 83/188 (44%)
Query: 635 DLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEE-----EVVASMHMDIIRK 689
++ +++ + +E F+RL ++ L +PL +P+ L + E++ M D R
Sbjct: 733 EIMLLNPYRVEEALLFKRLLENHKLPAEPLEKPIILTESLFNGSHYLEILYKMTTDDPRY 792
Query: 690 NGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLA--DNQGECSIISSYKMD 747
+G + DP A F++K +P + +E ++ + + L I+++
Sbjct: 793 SGSTYLSDPRLTAN-GFKIKLIPGASMAENYLE-IEGMANCLPFYGVMDLKEILNAILNK 850
Query: 748 TADSV--C-PSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADL--NSPWNCPHGRP 802
A V C P +V + L A R S + L + ++Q I+ + + N C HGRP
Sbjct: 851 NAKEVYECRPRKVMSYLEGEAVRLSRQLPMYLSKEDIQDIIYRMKNQFGNEIKGCVHGRP 910
Query: 803 TMRHLVDL 810
HL L
Sbjct: 911 FFHHLTSL 918
>TIGR_CMR|CHY_1396 [details] [associations]
symbol:CHY_1396 "DNA mismatch repair protein HexB"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0006298 "mismatch repair" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_00149 InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
eggNOG:COG0323 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 KO:K03572 OMA:IRNGTPM HOGENOM:HOG000256552
RefSeq:YP_360228.1 ProteinModelPortal:Q3ACA6 STRING:Q3ACA6
GeneID:3727331 KEGG:chy:CHY_1396 PATRIC:21275923
BioCyc:CHYD246194:GJCN-1395-MONOMER Uniprot:Q3ACA6
Length = 578
Score = 125 (49.1 bits), Expect = 1.3e-21, Sum P(4) = 1.3e-21
Identities = 29/65 (44%), Positives = 41/65 (63%)
Query: 10 PTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNG 69
P I+ + V+ +I AG+V++ S VKELVENSLDA A +I + ++E G V D+G
Sbjct: 2 PKIKRLPDEVIKKIAAGEVVERPYSVVKELVENSLDAKAQNINVYIEEGGLGKIVVEDDG 61
Query: 70 CGISP 74
GI P
Sbjct: 62 IGIPP 66
Score = 108 (43.1 bits), Expect = 1.3e-21, Sum P(4) = 1.3e-21
Identities = 21/51 (41%), Positives = 32/51 (62%)
Query: 765 ACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRK 815
AC++++ G+ L +EM +++ L N P +CPHGRPT+ L LT I K
Sbjct: 525 ACKNAVKFGEKLTYSEMTNLVKELFKTNYPLSCPHGRPTIYEL-SLTEINK 574
Score = 105 (42.0 bits), Expect = 1.3e-21, Sum P(4) = 1.3e-21
Identities = 30/90 (33%), Positives = 48/90 (53%)
Query: 612 EDFGR---MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLN---QQPLL 665
+DF + +VIGQF+L +II + + L I+DQHAA E+ +E+ T LN Q L
Sbjct: 388 KDFAKELNFQVIGQFSLKYIIVEKNDKLLIIDQHAAHERILYEKYQ--TKLNPFYSQVLT 445
Query: 666 RPLKLDLTPEEEVVASMHMDIIRKNGFSLE 695
P+++ +PE E + + G +E
Sbjct: 446 FPVRIKASPELEAFLQENYQNFLEIGLHIE 475
Score = 89 (36.4 bits), Expect = 1.3e-21, Sum P(4) = 1.3e-21
Identities = 39/144 (27%), Positives = 62/144 (43%)
Query: 150 EGFLSKPGQG---SGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGA-NSRQYPIAIMNF 205
EGF K G +G+ Q F VN R V ++K +++ Y+ + P+ +
Sbjct: 229 EGFFIKGGIALPPAGKPHRKLQVFAVNKRLVKSGILTKAIDDAYESLLPTGLKPLVFLEV 288
Query: 206 IVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASYSVNKVEQLIEPE-KS 264
+VP DVNV P K +V F DE I +R ++ N S S+ E KS
Sbjct: 289 VVPGTWVDVNVHPQKLEVKFMDEQKIYLDVRTIIRNKLV-NAKSSSLKSFSPARETNTKS 347
Query: 265 GPSSGAESCMFLEQLSPDGNGCIE 288
+ + F E+ S + + +E
Sbjct: 348 EDNDYWQVTYFAEEFSGNSDKLLE 371
>UNIPROTKB|Q8F6X4 [details] [associations]
symbol:mutL "DNA mismatch repair protein MutL"
species:189518 "Leptospira interrogans serovar Lai str. 56601"
[GO:0003697 "single-stranded DNA binding" evidence=IBA] [GO:0006200
"ATP catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] HAMAP:MF_00149
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 InterPro:IPR020667
Pfam:PF01119 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 eggNOG:COG0323 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032300 EMBL:AE010300
GenomeReviews:AE010300_GR KO:K03572 HOGENOM:HOG000256552
OMA:FLFINNR RefSeq:NP_711356.2 ProteinModelPortal:Q8F6X4
PaxDb:Q8F6X4 GeneID:1150518 KEGG:lil:LA_1175 PATRIC:22383195
ProtClustDB:CLSK573800 BioCyc:LINT189518:GJBB-947-MONOMER
Uniprot:Q8F6X4
Length = 593
Score = 142 (55.0 bits), Expect = 1.6e-21, Sum P(3) = 1.6e-21
Identities = 26/67 (38%), Positives = 45/67 (67%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ ++ ++++I AG+VI+ S VKEL+ENS+DA AT +++ K+ G ++ DNG G
Sbjct: 4 IQELSPELINQIAAGEVIESAHSVVKELMENSMDASATQVDVESKDGGLSLLRITDNGTG 63
Query: 72 ISPNNFK 78
I P + +
Sbjct: 64 IEPEDLE 70
Score = 130 (50.8 bits), Expect = 1.6e-21, Sum P(3) = 1.6e-21
Identities = 46/142 (32%), Positives = 70/142 (49%)
Query: 89 ALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCK 148
AL + VRF GK V VL T+ + K+ II +FG N + L V++ + +
Sbjct: 179 ALAREDVRFRLFQD-GKEV--FVLPTRENK--KERIIDLFGENFRDHLLEVSL-ERGGIQ 232
Query: 149 VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGA-NSRQYPIAIMNF-I 206
G++S P G Q+ F+N RP+++ S L+ + Y +P + F I
Sbjct: 233 ATGYISDPDFYKSNRTG--QFIFINGRPIEIKYSSVLLKKAYDELLPPNGHPYCFLFFEI 290
Query: 207 VPTRACDVNVTPDKRKVFFSDE 228
P+R DVNV P KR++ F DE
Sbjct: 291 DPSRV-DVNVHPAKREIRFLDE 311
Score = 112 (44.5 bits), Expect = 1.6e-21, Sum P(3) = 1.6e-21
Identities = 48/181 (26%), Positives = 77/181 (42%)
Query: 627 FIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDI 686
FI+ + + +I+DQH A E+ +E + + + +PL LTP V+ +
Sbjct: 417 FILAEAEDGFYIIDQHTAHERIRYEEVLRKLEKRNYGI-QPL---LTPIRIDVSKQEQED 472
Query: 687 IRKNGFSLEEDPHALAGL---RFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISS 743
I EE L L L+ +P + E V D ++ +G+
Sbjct: 473 ILNRKKEYEEVGIFLDPLGEDSIVLREIPAYMEPGQEKEIVLDFLNR---TEGK------ 523
Query: 744 YKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPT 803
+T++ P M ACRS+I GD L + +IL L+ +P CPHGRPT
Sbjct: 524 ---ETSE---PELYDLMAKCVACRSAIKKGDQLSDPILAEILNRLSYCENPSRCPHGRPT 577
Query: 804 M 804
+
Sbjct: 578 L 578
>TIGR_CMR|ECH_0884 [details] [associations]
symbol:ECH_0884 "DNA mismatch repair protein, MutL/HexB
family" species:205920 "Ehrlichia chaffeensis str. Arkansas"
[GO:0006298 "mismatch repair" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_00149 InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
eggNOG:COG0323 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 HOGENOM:HOG000256550 KO:K03572 OMA:FLFINNR
ProtClustDB:PRK00095 RefSeq:YP_507679.1 ProteinModelPortal:Q2GFV4
STRING:Q2GFV4 GeneID:3927913 KEGG:ech:ECH_0884 PATRIC:20577170
BioCyc:ECHA205920:GJNR-887-MONOMER Uniprot:Q2GFV4
Length = 673
Score = 134 (52.2 bits), Expect = 3.8e-21, Sum P(3) = 3.8e-21
Identities = 53/188 (28%), Positives = 86/188 (45%)
Query: 622 QFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVAS 681
Q + +II + + I+DQHAA E+ +E + Q V+ ++ + R + L PE + +
Sbjct: 489 QIHSRYIISQTQDSIVIIDQHAAHERLTYEYMKQ--VMAKEGIKRQILL--IPEI-IEMN 543
Query: 682 MHMDI-----IRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQG 736
H+D+ ++ L L L ++ VP FG DVK LI + D
Sbjct: 544 NHLDLELLVEYKEKLLKLGLLIEPLGNLSVIVREVP----ALFGSFDVKSLIINIVD--- 596
Query: 737 ECSIISSYKMDTADSV-CPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPW 795
SI M+ D++ +++ + + AC SSI G L EM IL ++ +
Sbjct: 597 --SI-----MEVGDTLFLDDKIKDICGTIACYSSIRSGRKLKIEEMNAILRNMENTAHSG 649
Query: 796 NCPHGRPT 803
C HGRPT
Sbjct: 650 QCNHGRPT 657
Score = 132 (51.5 bits), Expect = 3.8e-21, Sum P(3) = 3.8e-21
Identities = 28/60 (46%), Positives = 40/60 (66%)
Query: 20 VHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFKV 79
++RI AG+VI+ +S VKELVENS+DA AT+I I ++ G V DNG GI + ++
Sbjct: 11 INRIAAGEVIECPASVVKELVENSIDAKATAISITIERGGRNLIIVSDNGIGIKKEDMEI 70
Score = 117 (46.2 bits), Expect = 3.8e-21, Sum P(3) = 3.8e-21
Identities = 35/134 (26%), Positives = 61/134 (45%)
Query: 114 TQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVN 173
TQ S+ + + I GM PV + K + ++ G++ P G++ Y FVN
Sbjct: 200 TQQSNIDRLSEIKTLGMEFCKNSLPVNV-KEEQIQLSGYIGSPTLSRGKS--SLIYTFVN 256
Query: 174 DRPVDLPKVSKLVNELYKGANSR-QYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSIL 232
RPV + V Y + +YP+ ++ +P D NV P+K +V F D+ +
Sbjct: 257 SRPVYDNLLIGAVRYAYSDFIEKDKYPVVVLYLDIPCDQVDANVHPNKSEVRFQDKKLVY 316
Query: 233 HALREGLQEIYSPN 246
+ ++E+ S N
Sbjct: 317 RTVVNAIKEVLSIN 330
>RGD|1359511 [details] [associations]
symbol:Pms1 "postmeiotic segregation increased 1 (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0006298 "mismatch repair" evidence=ISO]
[GO:0042493 "response to drug" evidence=IEP] InterPro:IPR009071
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 Pfam:PF01119 SMART:SM00387 Prosite:PS00058
Pfam:PF00505 RGD:1359511 GO:GO:0005524 GO:GO:0042493 GO:GO:0016887
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0006298 GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407
eggNOG:COG0323 HSSP:P23367 GO:GO:0032389 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 CTD:5378 HOVERGEN:HBG031886
KO:K10864 EMBL:BC061722 IPI:IPI00421583 RefSeq:NP_001009535.1
UniGene:Rn.47945 ProteinModelPortal:Q6P7D0 SMR:Q6P7D0 STRING:Q6P7D0
GeneID:494322 KEGG:rno:494322 UCSC:RGD:1359511 NextBio:697597
Genevestigator:Q6P7D0 Uniprot:Q6P7D0
Length = 919
Score = 157 (60.3 bits), Expect = 3.2e-20, Sum P(4) = 3.2e-20
Identities = 45/171 (26%), Positives = 76/171 (44%)
Query: 124 IITVFGMNIYNCLEPVA-ICKSDSCKVEGFLSK-PGQGSGRNLG--DRQYFFVNDRPVDL 179
+++V G + +E V C+ + G K + +L +R + F+N RPV
Sbjct: 210 LMSVLGTAVMGNMESVERYCEDSQIHLRGLFPKHDADHNSTSLSTPERSFIFINSRPVHQ 269
Query: 180 PKVSKLVNELYK----GANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHAL 235
+ KL+ Y ++R YPI + VP+ D+N+TPDK +V ++ S+L AL
Sbjct: 270 KDILKLIRHYYNLKCLKESTRLYPIFFLKIDVPSAEVDINLTPDKSQVLLQNKESVLIAL 329
Query: 236 REGLQEIYSP--NNASYSVNKVEQLIEPEKSGPSSGAESCMFLEQLSPDGN 284
L Y P SY N+V+ + S E+ + ++ GN
Sbjct: 330 ENLLMTCYGPLPTTESYENNRVD--VSSANVVISETTETDVLFNKMESSGN 378
Score = 138 (53.6 bits), Expect = 3.2e-20, Sum P(4) = 3.2e-20
Identities = 29/71 (40%), Positives = 43/71 (60%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
++ + V + + Q I + S VKEL+ENSLDAGA SI++ L+ YG + ++ DNG G
Sbjct: 1 MKQLPAATVRLLSSSQTITSVVSVVKELIENSLDAGANSIDVKLENYGFDKIEIRDNGAG 60
Query: 72 ISPNNFKVRAV 82
I + V AV
Sbjct: 61 IKAVDVPVMAV 71
Score = 77 (32.2 bits), Expect = 3.2e-20, Sum P(4) = 3.2e-20
Identities = 42/192 (21%), Positives = 82/192 (42%)
Query: 635 DLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSL 694
D+ +++ + +E F+RL ++ +PL +P+ L E S +++++ K ++
Sbjct: 730 DVMLLNPYRVEEALLFKRLLENHKFLAEPLDKPIVLT---ESLFNGSDYLEVLHKMS-TV 785
Query: 695 EEDPHALAGLRF-RLKAVPFSKKITFGVEDVKDLISTLADNQGEC----------SIISS 743
EE L RL A F ++T GV ++ + + +C I+++
Sbjct: 786 EERCRGSVYLCDPRLTANGFKIRLTPGVSSAENYLEI--EGMAKCLPFYGVMDLKEILNA 843
Query: 744 YKMDTADSV--C-PSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADL--NSPWNCP 798
A + C P +V L A R S + L + ++Q ++ + C
Sbjct: 844 IVNKNAKEIYECRPRKVINYLEGEAVRLSRQLPMYLPQEDVQDLIYKMKHQFGKEIKGCV 903
Query: 799 HGRPTMRHLVDL 810
HGRP + HL+ L
Sbjct: 904 HGRPFLHHLIHL 915
Score = 49 (22.3 bits), Expect = 3.2e-20, Sum P(4) = 3.2e-20
Identities = 30/135 (22%), Positives = 56/135 (41%)
Query: 366 SRVMAKNITEDGESDSRSRCIQSSLNKFVTVSKRKYESIARPLTE-----MPLLRNQSLH 420
++ +A+N + G D ++ I++ K KYE A+ E M Q
Sbjct: 576 TQFLAEN-PKTGLEDVTAQ-IKAQWETLSEEEKHKYEEKAKKDLERYNNQMKKAIEQEAQ 633
Query: 421 CQMKKSNSDMDAVDTRSPVRRHLVDDIAKLNKIEPFKCNKADKVSKEIE--NILSSEGN- 477
+K + A +RH V D++ K++ ++ +K S+ I+ I S N
Sbjct: 634 VSLKDGRKKLRATGAWGCTQRHKVKDLSNQPKLDELFQSQNEKKSENIKITKIPFSMENL 693
Query: 478 -TNEKPREELVTQEK 491
N ++E+ +EK
Sbjct: 694 KVNFNKQKEVDLEEK 708
>TIGR_CMR|SPO_3362 [details] [associations]
symbol:SPO_3362 "DNA mismatch repair protein MutL"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0006298 "mismatch
repair" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_00149 InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR020667 Pfam:PF01119 Pfam:PF02518 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
HOGENOM:HOG000256550 KO:K03572 OMA:FLFINNR ProtClustDB:PRK00095
RefSeq:YP_168558.1 ProteinModelPortal:Q5LN50 GeneID:3194545
KEGG:sil:SPO3362 PATRIC:23380177 Uniprot:Q5LN50
Length = 621
Score = 165 (63.1 bits), Expect = 3.6e-20, Sum P(3) = 3.6e-20
Identities = 32/66 (48%), Positives = 50/66 (75%)
Query: 10 PTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNG 69
P IR +++ ++RI AG+V++ +SAVKELVEN++DAGAT I I L + G+ +V D+G
Sbjct: 13 PEIRQLDETAINRIAAGEVVERPASAVKELVENAIDAGATRIAIDLADGGKTLIRVSDDG 72
Query: 70 CGISPN 75
CG++P+
Sbjct: 73 CGMTPD 78
Score = 111 (44.1 bits), Expect = 3.6e-20, Sum P(3) = 3.6e-20
Identities = 48/183 (26%), Positives = 73/183 (39%)
Query: 621 GQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVA 680
GQ + +II + + IVDQHAA E+ +E+L + + + L L PE +V
Sbjct: 437 GQVHENYIIAQTADGMVIVDQHAAHERLVYEKLKRQ-MAETGVAAQAL---LIPE--IVE 490
Query: 681 SMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSI 740
D R L +D LA R L PF V + ++ + I
Sbjct: 491 LSTADCARL--LDLSDD---LA--RLGLTIEPFGGGAV-AVRETPAILGPVDAGAMLRDI 542
Query: 741 ISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHG 800
+ + +R+ A+L+ AC SI G + EM +L + C HG
Sbjct: 543 LDELADQGESATLQARIEAILSRVACHGSIRSGRRMRGEEMNALLREMEATPHSGQCNHG 602
Query: 801 RPT 803
RPT
Sbjct: 603 RPT 605
Score = 94 (38.1 bits), Expect = 3.6e-20, Sum P(3) = 3.6e-20
Identities = 46/188 (24%), Positives = 78/188 (41%)
Query: 89 ALIAKGVRFVCTNTTGKNVKSVVLKTQGSS-----SLKDNIITVFGMNIYNCLEPVAICK 143
A+ V F + +G +V + + +L+D + V G + + +
Sbjct: 188 AMAEPSVSFTLRDVSGGGEGRLVFRADAETGDLFDALRDRLAQVMGREFTDNALRIDTMR 247
Query: 144 SDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSR-QYPIAI 202
+ ++ G+ + P G + QY FVN RPV ++ + Y SR ++P A
Sbjct: 248 -EGLRLYGYAALPTYSRGAAVA--QYLFVNGRPVRDKMLTGALRAAYFDFLSRDRHPAAA 304
Query: 203 MNFIVPTRACDVNVTPDKRKVFFSD----ECSILHALREGLQEIYSPNNASYSV-NKVEQ 257
+ DVNV P K +V F D I+ ALR L E + + AS +V
Sbjct: 305 LFIDCDPTLVDVNVHPAKSEVRFRDPGVARGLIVSALRHALAE--AGHRASTTVAGATLG 362
Query: 258 LIEPEKSG 265
+ PE++G
Sbjct: 363 AMRPEQTG 370
>UNIPROTKB|D4A651 [details] [associations]
symbol:D4A651 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006298 "mismatch repair" evidence=IEA] [GO:0030983 "mismatched
DNA binding" evidence=IEA] InterPro:IPR009071 InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 Prosite:PS00058 Pfam:PF00505
GO:GO:0005524 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 GeneTree:ENSGT00530000063289
IPI:IPI00782442 PRIDE:D4A651 Ensembl:ENSRNOT00000043714
ArrayExpress:D4A651 Uniprot:D4A651
Length = 910
Score = 157 (60.3 bits), Expect = 6.2e-20, Sum P(4) = 6.2e-20
Identities = 45/171 (26%), Positives = 76/171 (44%)
Query: 124 IITVFGMNIYNCLEPVA-ICKSDSCKVEGFLSK-PGQGSGRNLG--DRQYFFVNDRPVDL 179
+++V G + +E V C+ + G K + +L +R + F+N RPV
Sbjct: 210 LMSVLGTAVMGNMESVERYCEDSQIHLRGLFPKHDADHNSTSLSTPERSFIFINSRPVHQ 269
Query: 180 PKVSKLVNELYK----GANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHAL 235
+ KL+ Y ++R YPI + VP+ D+N+TPDK +V ++ S+L AL
Sbjct: 270 KDILKLIRHYYNLKCLKESTRLYPIFFLKIDVPSAEVDINLTPDKSQVLLQNKESVLIAL 329
Query: 236 REGLQEIYSP--NNASYSVNKVEQLIEPEKSGPSSGAESCMFLEQLSPDGN 284
L Y P SY N+V+ + S E+ + ++ GN
Sbjct: 330 ENLLMTCYGPLPTTESYENNRVD--VSSANVVISETTETDVLFNKMESSGN 378
Score = 138 (53.6 bits), Expect = 6.2e-20, Sum P(4) = 6.2e-20
Identities = 29/71 (40%), Positives = 43/71 (60%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
++ + V + + Q I + S VKEL+ENSLDAGA SI++ L+ YG + ++ DNG G
Sbjct: 1 MKQLPAATVRLLSSSQTITSVVSVVKELIENSLDAGANSIDVKLENYGFDKIEIRDNGAG 60
Query: 72 ISPNNFKVRAV 82
I + V AV
Sbjct: 61 IKAVDVPVMAV 71
Score = 75 (31.5 bits), Expect = 6.2e-20, Sum P(4) = 6.2e-20
Identities = 43/186 (23%), Positives = 79/186 (42%)
Query: 635 DLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSL 694
D+ +++ + +E F+RL ++ +PL +P+ L E S +++++ K ++
Sbjct: 725 DVMLLNPYRVEEALLFKRLLENHKFLAEPLEKPIVLT---ESLFNGSDYLEVLHKMS-TV 780
Query: 695 EEDPHALAGLRF-RLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMD----TA 749
EE L RL A F ++T G +V L + C +S + TA
Sbjct: 781 EERCRGSVYLCDPRLTANGFKIRLTPGNNNVAFLKRKKINLPNSCFRLSEPSVTVCVVTA 840
Query: 750 DSVCPSR---VRAMLASRACRSSIMIGDALGRNEMQKILEHLADL--NSPWNCPHGRPTM 804
+ R V L+ A R S + L + ++Q ++ + C HGRP +
Sbjct: 841 EEGFLQRGAQVITTLSGEAVRLSRQLPMYLPQEDVQDLIYKMKHQFGKEIKGCVHGRPFL 900
Query: 805 RHLVDL 810
HL+ L
Sbjct: 901 HHLIHL 906
Score = 48 (22.0 bits), Expect = 6.2e-20, Sum P(4) = 6.2e-20
Identities = 25/103 (24%), Positives = 42/103 (40%)
Query: 398 KRKYESIARPLTE-----MPLLRNQSLHCQMKKSNSDMDAVDTRSPVRRHLVDDIAKLNK 452
K KYE A+ E M Q +K + A +RH V D++ K
Sbjct: 601 KHKYEEKAKKDLERYNNQMKKAIEQEAQVSLKDGRKKLRATGAWGCTQRHKVKDLSNQPK 660
Query: 453 IEPFKCNKADKVSKEIE--NILSSEGN--TNEKPREELVTQEK 491
++ ++ +K S+ I+ I S N N ++E+ +EK
Sbjct: 661 LDELFQSQNEKKSENIKITKIPFSMENLKVNFNKQKEVDLEEK 703
>UNIPROTKB|Q9RTR0 [details] [associations]
symbol:mutL "DNA mismatch repair protein MutL"
species:243230 "Deinococcus radiodurans R1" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] HAMAP:MF_00149
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014790 InterPro:IPR020667 Pfam:PF01119 Pfam:PF02518
Pfam:PF08676 SMART:SM00387 SMART:SM00853 Prosite:PS00058
GO:GO:0005524 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 EMBL:AE000513
GenomeReviews:AE000513_GR eggNOG:COG0323 InterPro:IPR014762
PANTHER:PTHR10073 GO:GO:0032300 HOGENOM:HOG000256550 KO:K03572
PIR:G75364 RefSeq:NP_295419.1 ProteinModelPortal:Q9RTR0
GeneID:1800018 KEGG:dra:DR_1696 PATRIC:21631024 OMA:ATMACHA
ProtClustDB:CLSK445200 BioCyc:DRAD243230:GH46-2065-MONOMER
Uniprot:Q9RTR0
Length = 547
Score = 120 (47.3 bits), Expect = 1.5e-18, Sum P(4) = 1.5e-18
Identities = 31/65 (47%), Positives = 39/65 (60%)
Query: 10 PT-IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDN 68
PT I + V I AG+V+ V+ELVEN+LDAGA+ IEI + G E QV DN
Sbjct: 2 PTPIHVLPPHVARLIAAGEVVSRPLDVVRELVENALDAGASRIEIEVDGGGLERVQVRDN 61
Query: 69 GCGIS 73
G GI+
Sbjct: 62 GSGIA 66
Score = 95 (38.5 bits), Expect = 1.5e-18, Sum P(4) = 1.5e-18
Identities = 23/62 (37%), Positives = 31/62 (50%)
Query: 746 MDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMR 805
++TA S P R +LA AC ++ G L +L L + PW CPHGRPT+
Sbjct: 462 VETALSGGPDPRREVLARLACLPALKAG-MLDAERGALVLAALRECEQPWACPHGRPTVL 520
Query: 806 HL 807
L
Sbjct: 521 RL 522
Score = 93 (37.8 bits), Expect = 1.5e-18, Sum P(4) = 1.5e-18
Identities = 31/102 (30%), Positives = 53/102 (51%)
Query: 613 DFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLK--L 670
+F + ++G + +++ + + DL++VD HAA E+ +ERL + + PL P L
Sbjct: 350 NFPDLTLLGVYQELYLLAQGEGDLWVVDAHAAHERALYERLGRE-LGTAAPLELPTPELL 408
Query: 671 DLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVP 712
LTPE+ A +H G+ L + AGL RL+ +P
Sbjct: 409 HLTPEQ--TARLHERGAELRGWGLTIEDFG-AGLA-RLRTLP 446
Score = 88 (36.0 bits), Expect = 1.5e-18, Sum P(4) = 1.5e-18
Identities = 27/110 (24%), Positives = 51/110 (46%)
Query: 132 IYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLP-KVSKLVNELY 190
+Y L + D+ V G +S+P R DR +F VN RP+ P ++ + V + Y
Sbjct: 213 VYGPLSANRVLTLDTPGVRGVVSRPELTRARR--DRMHFAVNGRPIVAPPELERAVIDAY 270
Query: 191 KGA-NSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGL 239
+ P+ +++ V D N+ P K+ V +D ++ +R+ +
Sbjct: 271 AELLPAGTAPLCVLDLTVAPEDYDPNIHPAKQVVALADLPAVALRVRDAV 320
Score = 43 (20.2 bits), Expect = 4.9e-14, Sum P(4) = 4.9e-14
Identities = 16/77 (20%), Positives = 34/77 (44%)
Query: 504 SSNDLKKNSEDLSVAASHLQFSGSILDAPVPSSSLDICSTLQFSIQDLRKRRQ-QRLSIM 562
+++ L E S++ + L F G L A + L++ + + R R Q + +
Sbjct: 78 ATSKLTAGPETGSLSVTTLGFRGEALWAAAQAGELELTTRPAAQVGAARLRAQGDAVEVS 137
Query: 563 QSSCHTSGSVKMRRCFA 579
++S +V + + FA
Sbjct: 138 RTSAPAGTTVTVSQLFA 154
>UNIPROTKB|Q48P04 [details] [associations]
symbol:mutL "DNA mismatch repair protein MutL"
species:264730 "Pseudomonas syringae pv. phaseolicola 1448A"
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0006298
"mismatch repair" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] HAMAP:MF_00149 InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0016887
GO:GO:0006298 EMBL:CP000058 GenomeReviews:CP000058_GR
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
eggNOG:COG0323 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 KO:K03572 ProtClustDB:PRK00095
HOGENOM:HOG000256551 OMA:ATMACHA RefSeq:YP_272865.1
ProteinModelPortal:Q48P04 SMR:Q48P04 STRING:Q48P04 GeneID:3560497
KEGG:psp:PSPPH_0563 PATRIC:19970177 Uniprot:Q48P04
Length = 648
Score = 128 (50.1 bits), Expect = 2.6e-18, Sum P(3) = 2.6e-18
Identities = 26/75 (34%), Positives = 51/75 (68%)
Query: 2 DVETPTNSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEE 61
+ +T N+ I ++ + ++I AG+V++ +S +KEL+ENSLD+GA I++ +++ G +
Sbjct: 13 NAQTVLNAARIELLSPRLANQIAAGEVVERPASVIKELLENSLDSGARRIDVDVEQAGIK 72
Query: 62 WFQVVDNGCGISPNN 76
+V D+G GIS ++
Sbjct: 73 LLKVRDDGGGISSDD 87
Score = 116 (45.9 bits), Expect = 2.6e-18, Sum P(3) = 2.6e-18
Identities = 39/114 (34%), Positives = 53/114 (46%)
Query: 162 RNLGDRQYFFVNDRPVDLPKVSKLVNELYKGA--NSRQYPIAIMNFIVPTRACDVNVTPD 219
R+ D QYFFVN R V V+ V + Y+ N R +P ++ F V A DVNV P
Sbjct: 267 RSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGR-HPTFVLFFEVDPAAVDVNVHPT 325
Query: 220 KRKVFFSDECSI---LHA-LREGLQEIYSPNNASYSVNKVEQLIEPEKSGPSSG 269
K +V F D + L+ L L ++ N SV EP +GP +G
Sbjct: 326 KHEVRFRDGRMVHDFLYGTLHRALGDVRPENQLGGSVPVAA---EPRPTGPEAG 376
Score = 111 (44.1 bits), Expect = 2.6e-18, Sum P(3) = 2.6e-18
Identities = 44/178 (24%), Positives = 74/178 (41%)
Query: 627 FIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDI 686
+I+ + L +VD HAA E+ +ERL + + N+ +PL L PE V+ D
Sbjct: 469 YILAENAHGLVLVDMHAAHERIMYERL-KIAMANEGLSGQPL---LVPESLAVSQREADC 524
Query: 687 IRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSY-K 745
EE L F L+ + T + + L+ N+ +++ +
Sbjct: 525 A-------EEHIATFQRLGFELQRLGPE---TLAIRQIPALLKQAEANRLVSDVLADLME 574
Query: 746 MDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPT 803
T+D V + + +L + AC +I L EM +L + + C HGRPT
Sbjct: 575 YGTSDRV-QAHMNELLGTMACHGAIRANRRLAIPEMNGLLRDMENTERSGQCNHGRPT 631
>TIGR_CMR|APH_0939 [details] [associations]
symbol:APH_0939 "DNA mismatch repair protein MutL"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0006298 "mismatch
repair" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_00149 InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0006298
EMBL:CP000235 GenomeReviews:CP000235_GR Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 eggNOG:COG0323
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
RefSeq:YP_505509.1 ProteinModelPortal:Q2GJE2 STRING:Q2GJE2
GeneID:3931281 KEGG:aph:APH_0939 PATRIC:20950598
HOGENOM:HOG000256550 KO:K03572 OMA:IRNGTPM ProtClustDB:CLSK2465330
BioCyc:APHA212042:GHPM-952-MONOMER Uniprot:Q2GJE2
Length = 634
Score = 129 (50.5 bits), Expect = 3.8e-18, Sum P(3) = 3.8e-18
Identities = 26/54 (48%), Positives = 38/54 (70%)
Query: 20 VHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGIS 73
+++I AG+VI +S VKELVENS+DAGA +I + + + G V D+GCGI+
Sbjct: 11 INKIAAGEVIDCPASVVKELVENSIDAGAKTINVHVDKGGRNLISVSDDGCGIA 64
Score = 126 (49.4 bits), Expect = 3.8e-18, Sum P(3) = 3.8e-18
Identities = 53/181 (29%), Positives = 82/181 (45%)
Query: 627 FIIGKLDQDLFIVDQHAADEKYNFERLSQSTV---LNQQPLLRPLKLDLTPEEEVVASMH 683
+II + + IVDQHAA E+ E + + T + +Q LL P ++L E E+ +
Sbjct: 455 YIISRAGDYVIIVDQHAAHERLVCEYIKKVTEQEGIKRQVLLMPEFIELGNEYEL--ELL 512
Query: 684 MDIIRK-NGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIIS 742
+ K L +P + L ++ VP FGV D K LIS + + SI++
Sbjct: 513 TEYREKLRDLGLIVEP--MGDLTVVVREVP----AIFGVVDAKALISKILE-----SIMA 561
Query: 743 SYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRP 802
K D + ++ + + AC SSI G + EM +L H+ C HGRP
Sbjct: 562 --KGD--ELFVKGKLSHICGTVACYSSIRSGRIMKLEEMNSLLRHMESTPHSGQCNHGRP 617
Query: 803 T 803
T
Sbjct: 618 T 618
Score = 98 (39.6 bits), Expect = 3.8e-18, Sum P(3) = 3.8e-18
Identities = 37/144 (25%), Positives = 63/144 (43%)
Query: 107 VKSVVLKTQGSSSLKDNI--ITVFGMNIYNCLEPVAICKS-DSCKVEGFLSKPGQGSGRN 163
V+ + K SL + + + FG ++ C + + I S D +V G + P +
Sbjct: 191 VERQIFKYSAQESLIERLKEMRAFG-EVF-CEQSLEINHSIDHVRVYGHIGLPTFNKSKP 248
Query: 164 LGDRQYFFVNDRPVDLPKVSKLVNELYKGANSR-QYPIAIMNFIVPTRACDVNVTPDKRK 222
+ FVN RP+ + V Y G + ++P+ ++ V DVNV P K +
Sbjct: 249 --GMVHTFVNGRPIYSTLLLGAVKSAYHGLIPKDRHPVVVLALDVMPAYVDVNVHPSKME 306
Query: 223 VFFSDECSILHALREGLQEIYSPN 246
V F D+ + A+ + L E S N
Sbjct: 307 VRFQDKRLVYKAVLDALGEALSSN 330
>TIGR_CMR|BA_3904 [details] [associations]
symbol:BA_3904 "DNA mismatch repair protein MutL"
species:198094 "Bacillus anthracis str. Ames" [GO:0005524 "ATP
binding" evidence=ISS] [GO:0006281 "DNA repair" evidence=ISS]
HAMAP:MF_00149 InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
eggNOG:COG0323 HSSP:P23367 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 KO:K03572 HOGENOM:HOG000256552
RefSeq:NP_846151.1 RefSeq:YP_020542.1 RefSeq:YP_029870.1
ProteinModelPortal:Q81WR4 IntAct:Q81WR4 DNASU:1085120
EnsemblBacteria:EBBACT00000009631 EnsemblBacteria:EBBACT00000015187
EnsemblBacteria:EBBACT00000021815 GeneID:1085120 GeneID:2814810
GeneID:2848877 KEGG:ban:BA_3904 KEGG:bar:GBAA_3904 KEGG:bat:BAS3617
OMA:FLFINNR ProtClustDB:PRK00095
BioCyc:BANT260799:GJAJ-3676-MONOMER
BioCyc:BANT261594:GJ7F-3793-MONOMER Uniprot:Q81WR4
Length = 626
Score = 141 (54.7 bits), Expect = 7.8e-18, Sum P(3) = 7.8e-18
Identities = 30/62 (48%), Positives = 45/62 (72%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR ++ + + I AG+V++ +S VKELVENS+DA +TSIEI L+E G +++DNG G
Sbjct: 4 IRKLDDQLSNLIAAGEVVERPASVVKELVENSIDANSTSIEIHLEEAGLSKIRIIDNGDG 63
Query: 72 IS 73
I+
Sbjct: 64 IA 65
Score = 115 (45.5 bits), Expect = 7.8e-18, Sum P(3) = 7.8e-18
Identities = 44/189 (23%), Positives = 79/189 (41%)
Query: 620 IGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVV 679
IGQ + +I + D+ L+++DQHAA E+ N+E Q + +E++
Sbjct: 441 IGQMHGTYIFAQNDKGLYMIDQHAAQERINYEYFRDKVGRVAQEV-----------QELL 489
Query: 680 ASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVED--VKDLISTLADNQGE 737
+D+ +EE L + L+ I K + + D E
Sbjct: 490 VPYRIDLSLTEFLRVEEQLEELKKVGLFLEQFGHQSFIVRSHPTWFPKGQETEIIDEMME 549
Query: 738 CSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNC 797
++ K+D + R A + +C++SI L +++ +LE L +P+ C
Sbjct: 550 -QVVKLKKVD----IKKLREEAAIMM-SCKASIKANQYLTNDQIFALLEELRTTTNPYTC 603
Query: 798 PHGRPTMRH 806
PHGRP + H
Sbjct: 604 PHGRPILVH 612
Score = 93 (37.8 bits), Expect = 7.8e-18, Sum P(3) = 7.8e-18
Identities = 33/136 (24%), Positives = 61/136 (44%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYF 170
+L T G+ ++ + +++ + + L P+ +S ++G+++ P R Y
Sbjct: 195 LLHTSGNGDVRQVLASIYSIQVAKKLVPIE-AESLDFTIKGYVTLPEV----TRASRNYM 249
Query: 171 --FVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSD 227
VN R V + K + + Y +YPI ++ + DVNV P K +V FS
Sbjct: 250 STIVNGRYVRNFVLMKAIQQGYHTLLPVGRYPIGFLSIEMDPMLVDVNVHPAKLEVRFSK 309
Query: 228 ECSILHALREGLQEIY 243
E +L + E LQ +
Sbjct: 310 EQELLKLIEETLQAAF 325
Score = 53 (23.7 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 15/60 (25%), Positives = 30/60 (50%)
Query: 620 IGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLK-LDLTPEEEV 678
+G++ +GF+ ++D L V+ H A + F + + L ++ L K + L P+ V
Sbjct: 277 VGRYPIGFLSIEMDPMLVDVNVHPAKLEVRFSKEQELLKLIEETLQAAFKKIQLIPDAGV 336
>UNIPROTKB|G3N1K7 [details] [associations]
symbol:PMS2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0030983 "mismatched DNA binding" evidence=IEA]
[GO:0006298 "mismatch repair" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
Pfam:PF02518 SMART:SM00387 Prosite:PS00058 GO:GO:0005524
GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
InterPro:IPR014762 PANTHER:PTHR10073 GeneTree:ENSGT00530000063289
EMBL:DAAA02058333 Ensembl:ENSBTAT00000065929 Uniprot:G3N1K7
Length = 180
Score = 222 (83.2 bits), Expect = 3.3e-17, P = 3.3e-17
Identities = 41/67 (61%), Positives = 55/67 (82%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+PI++ VH+IC+GQV+ LS+AVKELVENS+DAGATSI++ LK+YG E +V DNGCG
Sbjct: 77 IKPIDRKSVHQICSGQVVLGLSTAVKELVENSVDAGATSIDLRLKDYGVELIEVSDNGCG 136
Query: 72 ISPNNFK 78
+ NF+
Sbjct: 137 VEEENFE 143
>UNIPROTKB|Q13401 [details] [associations]
symbol:PMS2P3 "Putative postmeiotic segregation increased
2-like protein 3" species:9606 "Homo sapiens" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001909 InterPro:IPR003594 Pfam:PF01352 PROSITE:PS50805
SMART:SM00349 GO:GO:0005524 GO:GO:0006355 GO:GO:0003676
GO:GO:0005622 Gene3D:3.30.565.10 SUPFAM:SSF55874 EMBL:CH471220
eggNOG:COG0323 EMBL:AC018720 SUPFAM:SSF109640 HOGENOM:HOG000231475
HOVERGEN:HBG067759 UniGene:Hs.661055 HSSP:P54278 EMBL:U38979
EMBL:CR621744 EMBL:BC029646 EMBL:BC101598 IPI:IPI00022518
IPI:IPI00395560 IPI:IPI00743216 UniGene:Hs.659871
ProteinModelPortal:Q13401 SMR:Q13401 STRING:Q13401 DMDM:74722311
PRIDE:Q13401 UCSC:uc003uzd.1 GeneCards:GC07M075138 HGNC:HGNC:9128
neXtProt:NX_Q13401 InParanoid:Q13401 OrthoDB:EOG483D6N
NextBio:20894 CleanEx:HS_PMS2L3 Genevestigator:Q13401
Uniprot:Q13401
Length = 168
Score = 219 (82.2 bits), Expect = 7.0e-17, P = 7.0e-17
Identities = 40/74 (54%), Positives = 57/74 (77%)
Query: 5 TPTNSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQ 64
+P + I+PI++ VH+IC+G V+ LS+AVKELVENSLDAGAT+I++ LK+YG + +
Sbjct: 83 SPEPAKAIKPIDRKSVHQICSGPVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIE 142
Query: 65 VVDNGCGISPNNFK 78
V DNGCG+ NF+
Sbjct: 143 VSDNGCGVEEENFE 156
>UNIPROTKB|P49850 [details] [associations]
symbol:mutL "DNA mismatch repair protein MutL"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0003697 "single-stranded DNA binding" evidence=IBA] [GO:0006200
"ATP catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] HAMAP:MF_00149
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 InterPro:IPR020667
Pfam:PF01119 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 EMBL:AL009126 GenomeReviews:AL009126_GR
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 EMBL:U27343
eggNOG:COG0323 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032300 KO:K03572 HOGENOM:HOG000256552
OMA:FLFINNR ProtClustDB:PRK00095 PIR:A69663 RefSeq:NP_389587.1
PDB:3GAB PDB:3KDG PDB:3KDK PDBsum:3GAB PDBsum:3KDG PDBsum:3KDK
ProteinModelPortal:P49850 SMR:P49850 IntAct:P49850
EnsemblBacteria:EBBACT00000001153 GeneID:939455 KEGG:bsu:BSU17050
PATRIC:18975217 GenoList:BSU17050 BioCyc:BSUB:BSU17050-MONOMER
EvolutionaryTrace:P49850 Uniprot:P49850
Length = 627
Score = 121 (47.7 bits), Expect = 1.1e-16, Sum P(3) = 1.1e-16
Identities = 26/58 (44%), Positives = 41/58 (70%)
Query: 21 HRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFK 78
++I AG+V++ +S VKELVEN++DA +T IEI ++E G +V+DNG G+ + K
Sbjct: 13 NKIAAGEVVERPASVVKELVENAIDADSTVIEIDIEEAGLASIRVLDNGEGMENEDCK 70
Score = 115 (45.5 bits), Expect = 1.1e-16, Sum P(3) = 1.1e-16
Identities = 46/190 (24%), Positives = 83/190 (43%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEE 676
M IGQ + +I+ + + L+I+DQHAA E+ +E + V +P ++ + + LT
Sbjct: 439 MYPIGQMHGTYILAQNENGLYIIDQHAAQERIKYEYFREK-VGEVEPEVQEMIVPLTFHY 497
Query: 677 EVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQG 736
++ II ++ LE L V F + +LI +
Sbjct: 498 STNEAL---IIEQHKQELESVGVFLESFGSNSYIVR-CHPAWFPKGEEAELIEEIIQQ-- 551
Query: 737 ECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWN 796
++ S +D + R A + +C+ SI L +E++ +L+ L + P+
Sbjct: 552 ---VLDSKNID----IKKLREEAAIMM-SCKGSIKANRHLRNDEIKALLDDLRSTSDPFT 603
Query: 797 CPHGRPTMRH 806
CPHGRP + H
Sbjct: 604 CPHGRPIIIH 613
Score = 103 (41.3 bits), Expect = 1.1e-16, Sum P(3) = 1.1e-16
Identities = 42/167 (25%), Positives = 79/167 (47%)
Query: 104 GKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPG-QGSGR 162
GKN+ L+T G+ ++ + ++G + + P+ + D +V+G+++ P + R
Sbjct: 192 GKNL----LQTNGNGDVRHVLAAIYGTAVAKKMLPLHVSSLDF-EVKGYIALPEITRASR 246
Query: 163 NLGDRQYFFVNDRPV-DLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACDVNVTPDK 220
N VN R + + P V K V+E Y ++PI + + DVNV P K
Sbjct: 247 NYMSS---VVNGRYIKNFPLV-KAVHEGYHTLLPIGRHPITFIEITMDPILVDVNVHPSK 302
Query: 221 RKVFFSDECSILHALREGLQEIYSPNNASYSVNKVEQLIEPEKSGPS 267
+V S E + +R+G+++++ S Q+ P+KS P+
Sbjct: 303 LEVRLSKETELHDLIRDGIKDVFKQQQLIPSA----QV--PKKSAPA 343
Score = 37 (18.1 bits), Expect = 9.1e-09, Sum P(3) = 9.1e-09
Identities = 9/29 (31%), Positives = 17/29 (58%)
Query: 457 KCNKADKVSKEIENILSSEGNTNEKPREE 485
K +A+ + + I+ +L S+ +K REE
Sbjct: 538 KGEEAELIEEIIQQVLDSKNIDIKKLREE 566
>UNIPROTKB|Q89DE6 [details] [associations]
symbol:mutL "DNA mismatch repair protein MutL"
species:224911 "Bradyrhizobium japonicum USDA 110" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] HAMAP:MF_00149
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 InterPro:IPR020667
Pfam:PF01119 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 eggNOG:COG0323 EMBL:BA000040
GenomeReviews:BA000040_GR HSSP:P23367 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 GO:GO:0032300
HOGENOM:HOG000256550 KO:K03572 OMA:FLFINNR ProtClustDB:PRK00095
RefSeq:NP_774133.1 ProteinModelPortal:Q89DE6 GeneID:1054324
KEGG:bja:blr7493 PATRIC:21198969
BioCyc:BJAP224911:GJEJ-7548-MONOMER Uniprot:Q89DE6
Length = 603
Score = 124 (48.7 bits), Expect = 3.7e-16, Sum P(3) = 3.7e-16
Identities = 25/62 (40%), Positives = 42/62 (67%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
+R + + VV+RI AG+V++ +S VKELVEN++DAGA+ I++ G + D+G G
Sbjct: 3 VRQLPEQVVNRIAAGEVVERPASVVKELVENAIDAGASRIDVFTDGGGRRRIGITDDGSG 62
Query: 72 IS 73
++
Sbjct: 63 MT 64
Score = 115 (45.5 bits), Expect = 3.7e-16, Sum P(3) = 3.7e-16
Identities = 58/199 (29%), Positives = 79/199 (39%)
Query: 622 QFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLN--QQPLLRPLKLDLTPEEEVV 679
Q + +I+ + L IVDQHAA E+ +E L S N Q+ +L L PE +
Sbjct: 420 QIHETYIVSQTRDGLIIVDQHAAHERIVYEGLKASLAANGVQRQIL------LIPE---I 470
Query: 680 ASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD-NQGEC 738
M + + L E LA F L F G V++ S L N G
Sbjct: 471 VEMDEATVER----LLERSDELAS--FGLAIESFGP----GAVAVRETPSLLGKTNAGGL 520
Query: 739 SIISSYKMDTADSVCPSRVRAM--LASRACRSSIMIGDALGRNEMQKILEHLADLNSPWN 796
S M D P R M A+ AC S+ G L EM +L + + +
Sbjct: 521 LRDLSEHMAEWDEALPLERRLMHVAATMACHGSVRAGRRLRPEEMNALLREMEETPNSGQ 580
Query: 797 CPHGRPTMRHLVDLTTIRK 815
C HGRPT L L+ + K
Sbjct: 581 CNHGRPTYVEL-KLSDVEK 598
Score = 94 (38.1 bits), Expect = 3.7e-16, Sum P(3) = 3.7e-16
Identities = 30/96 (31%), Positives = 42/96 (43%)
Query: 149 VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSR-QYPIAIMNFIV 207
V G+ + P LG QY FVN RPV + V Y R ++P+ + +
Sbjct: 235 VSGYAAAPALTKANALG--QYLFVNGRPVRDKLILGAVRAAYSDYLPRDRHPVLALFVTL 292
Query: 208 PTRACDVNVTPDKRKVFFSD----ECSILHALREGL 239
R D NV P K +V F + I+H L+E L
Sbjct: 293 DPREVDANVHPAKTEVRFRNAGLVRALIVHGLKEAL 328
>UNIPROTKB|Q5JN46 [details] [associations]
symbol:P0401G10.10 "Os01g0958900 protein" species:39947
"Oryza sativa Japonica Group" [GO:0000795 "synaptonemal complex"
evidence=IBA] [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0005712 "chiasma" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032390 "MutLbeta complex"
evidence=IBA] [GO:0032407 "MutSalpha complex binding" evidence=IBA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR011186
InterPro:IPR013507 InterPro:IPR014763 Pfam:PF01119 SMART:SM00387
Prosite:PS00058 GO:GO:0005524 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 EMBL:AP008207
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407
GO:GO:0000795 KO:K08734 OMA:SIQVVVK GO:GO:0005712 GO:GO:0032389
GO:GO:0032390 InterPro:IPR014762 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585 EMBL:AP003238
EMBL:AK103319 RefSeq:NP_001045457.1 UniGene:Os.10900 STRING:Q5JN46
GeneID:4325393 KEGG:osa:4325393 ProtClustDB:CLSN2690816
Uniprot:Q5JN46
Length = 724
Score = 174 (66.3 bits), Expect = 5.2e-16, Sum P(2) = 5.2e-16
Identities = 40/79 (50%), Positives = 57/79 (72%)
Query: 10 PTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNG 69
P IR + + VV+RI AG+VI+ SSAVKEL+ENSLDAGA+S+ +A+K+ G + QV D+G
Sbjct: 16 PRIRRLEESVVNRIAAGEVIQRPSSAVKELIENSLDAGASSVSVAVKDGGLKLIQVSDDG 75
Query: 70 CGISPNNFKVRAVFLCQAY 88
GI F+ A+ LC+ +
Sbjct: 76 HGI---RFEDLAI-LCERH 90
Score = 113 (44.8 bits), Expect = 5.2e-16, Sum P(2) = 5.2e-16
Identities = 37/160 (23%), Positives = 72/160 (45%)
Query: 95 VRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSC----KVE 150
V F C G N V + +SS D I +V+G ++ L + + D+ K++
Sbjct: 200 VTFSCRKH-GANRADV--HSASTSSRLDAIRSVYGASVVRDLIEIKVSYEDAADSIFKMD 256
Query: 151 GFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSR-QYPIAIMNFIVPT 209
G++S + + F+NDR VD + + + +Y + P M+ +P+
Sbjct: 257 GYISNANYVAKKIT---MILFINDRLVDCTALKRAIEFVYSATLPQASKPFIYMSIHLPS 313
Query: 210 RACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNAS 249
DVN+ P K++V ++ I+ +R ++E +N +
Sbjct: 314 EHVDVNIHPTKKEVSLLNQERIIETIRNAIEEKLMNSNTT 353
>POMBASE|SPBC1703.04 [details] [associations]
symbol:mlh1 "MutL family protein Mlh1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003677 "DNA binding"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006298 "mismatch repair" evidence=IEA] [GO:0030983 "mismatched
DNA binding" evidence=IEA] [GO:0044732 "mitotic spindle pole body"
evidence=IDA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR011186 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 PomBase:SPBC1703.04 Prosite:PS00058
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0044732
GO:GO:0003677 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
eggNOG:COG0323 KO:K08734 OMA:SIQVVVK InterPro:IPR014762
PANTHER:PTHR10073 PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585
HOGENOM:HOG000176000 EMBL:D89212 PIR:T43016 PIR:T50317
RefSeq:NP_596199.1 ProteinModelPortal:Q9P7W6 STRING:Q9P7W6
EnsemblFungi:SPBC1703.04.1 GeneID:2539949 KEGG:spo:SPBC1703.04
OrthoDB:EOG43XZBN NextBio:20801092 Uniprot:Q9P7W6
Length = 684
Score = 176 (67.0 bits), Expect = 6.9e-16, Sum P(2) = 6.9e-16
Identities = 37/89 (41%), Positives = 61/89 (68%)
Query: 1 MDVETPTNSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGE 60
MDV + IRP+++ V+++I AG++I+ +A+KEL+ENSLDAG+TSI++ LK+ G
Sbjct: 1 MDVNSRAK---IRPLDQLVINKIAAGEIIERPENAIKELIENSLDAGSTSIDVLLKDGGL 57
Query: 61 EWFQVVDNGCGISPNNFKVRAVFLCQAYA 89
+ Q+ DNG GI ++ +LCQ ++
Sbjct: 58 KLLQITDNGSGIQYDDLP----YLCQRFS 82
Score = 109 (43.4 bits), Expect = 6.9e-16, Sum P(2) = 6.9e-16
Identities = 62/251 (24%), Positives = 109/251 (43%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
R + L Q YA+ V F C G V S+ L ++ S + D I ++G + + L
Sbjct: 183 RIMILVQKYAIHNDQVSFNCKKV-GDTVASLSLSSRLSKA--DKIRHIYGPRVASHLRDF 239
Query: 140 AICKSDSCKVEGFLSKPGQGSGRNLGDRQ---YFFVNDRPVDLPKVSKLVNELY-----K 191
++ + S + GF S G S + D++ F+N+R V+ ++ + E Y K
Sbjct: 240 SLGEGQS-SIVGF-SANGFISNADFQDKKSNLILFINNRLVESVELRHALEETYAKYLHK 297
Query: 192 GANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNA--S 249
GA+ Y ++ + DVNV P KR V F + I ++ + L EI + S
Sbjct: 298 GASYFVY----LSLNMSPEQLDVNVHPSKRIVHFLYDQEIATSICDKLGEILERTDTERS 353
Query: 250 YSVNKVEQLIEPEKSGPSSGAESCM----FLEQLSPDGNGCIEILNEQ--QISKGNTPKT 303
Y + + I K+ SS ++ +L + P +L++ Q S N
Sbjct: 354 YPLQAMIPSISNTKNAESSSQKAVRTYENYLVRTDPRERSIKSMLSDNFLQRSSNNYDNE 413
Query: 304 V--EVDTLHSD 312
+ +VD+ +S+
Sbjct: 414 IIEKVDSANSN 424
Score = 43 (20.2 bits), Expect = 4.7e-09, Sum P(2) = 4.7e-09
Identities = 11/37 (29%), Positives = 19/37 (51%)
Query: 224 FFS--DECSILHALREGLQEIYSPNNASYSVNKVEQL 258
FF DE S L+ + + + + Y P SY + V+ +
Sbjct: 601 FFDWLDEKSCLNGIMKAIAKFYVPLPLSYEESDVKSI 637
>UNIPROTKB|Q3BDU3 [details] [associations]
symbol:PMS1 "Rhabdomyosarcoma antigen MU-RMS-40.10E"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006298 "mismatch repair" evidence=IEA] [GO:0030983 "mismatched
DNA binding" evidence=IEA] InterPro:IPR009071 InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 Pfam:PF01119 SMART:SM00387
Prosite:PS00058 Pfam:PF00505 GO:GO:0005524 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 EMBL:AC013468 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 InterPro:IPR014762 PANTHER:PTHR10073 EMBL:AC008122
UniGene:Hs.111749 HGNC:HGNC:9121 HOGENOM:HOG000039972
HOVERGEN:HBG031886 ChiTaRS:PMS1 EMBL:AY540751 IPI:IPI00916989
SMR:Q3BDU3 STRING:Q3BDU3 Ensembl:ENST00000450931 Uniprot:Q3BDU3
Length = 659
Score = 147 (56.8 bits), Expect = 8.4e-16, Sum P(2) = 8.4e-16
Identities = 73/301 (24%), Positives = 123/301 (40%)
Query: 149 VEGFLSK-PGQGSGRNLG--DRQYFFVNDRPVDLPKVSKLVNELYK----GANSRQYPIA 201
+ GFL K S +L +R + F+N RPV + KL+ Y ++R YP+
Sbjct: 197 LSGFLPKCDADHSFTSLSTPERSFIFINSRPVHQKDILKLIRHHYNLKCLKESTRLYPVF 256
Query: 202 IMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSP--NNASYSVNKVEQLI 259
+ VPT DVN+TPDK +V ++ S+L AL + Y P + SY NK + +
Sbjct: 257 FLKIDVPTADVDVNLTPDKSQVLLQNKESVLIALENLMTTCYGPLPSTNSYENNKTD--V 314
Query: 260 EPEKSGPSSGAESCMFLEQLSPDGNGCIEILNEQQISKGNTPKTVEVDTLHSDALEGLVH 319
S AE+ + ++ G + + I N E D L +
Sbjct: 315 SAADIVLSKTAETDVLFNKVESSGKNYSNV-DTSVIPFQNDMHNDESGKNTDDCLNHQI- 372
Query: 320 SSNENGKGNFTLKAHD-DKSADRLSKFNCMKLIGPHNVPTE--ENC--PSPSRVMAKN-- 372
S + G G+ + + + DK+ + M + N TE + C S ++N
Sbjct: 373 SIGDFGYGHCSSEISNIDKNTKNAFQDISMSNVSWENSQTEYSKTCFISSVKHTQSENGN 432
Query: 373 ---ITEDGESDSRSRCIQSSLNKFVTVSKRKY--ESIARPLTEMPLL-RNQSLHCQMKKS 426
I E GE++ + SS S+ S+ + + +L +SL C++ +
Sbjct: 433 KDHIDESGENEEEAGLENSSEISADEWSRGNILKNSVGENIEPVKILVPEKSLPCKVSNN 492
Query: 427 N 427
N
Sbjct: 493 N 493
Score = 138 (53.6 bits), Expect = 8.4e-16, Sum P(2) = 8.4e-16
Identities = 29/71 (40%), Positives = 45/71 (63%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
++ + V + + Q+I + S VKEL+ENSLDAGATS+++ L+ YG + +V DNG G
Sbjct: 1 MKQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSVDVKLENYGFDKIEVRDNGEG 60
Query: 72 ISPNNFKVRAV 82
I + V A+
Sbjct: 61 IKAVDAPVMAM 71
>UNIPROTKB|O67518 [details] [associations]
symbol:mutL "DNA mismatch repair protein MutL"
species:224324 "Aquifex aeolicus VF5" [GO:0003697 "single-stranded
DNA binding" evidence=IBA] [GO:0006200 "ATP catabolic process"
evidence=IBA] [GO:0006298 "mismatch repair" evidence=IBA]
[GO:0016887 "ATPase activity" evidence=IBA] [GO:0032300 "mismatch
repair complex" evidence=IBA] HAMAP:MF_00149 InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 InterPro:IPR014763
InterPro:IPR014790 InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676
SMART:SM00387 Prosite:PS00058 GO:GO:0005524 GO:GO:0016887
GO:GO:0006298 GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 EMBL:AE000657
GenomeReviews:AE000657_GR eggNOG:COG0323 InterPro:IPR014762
PANTHER:PTHR10073 TIGRFAMs:TIGR00585 GO:GO:0032300 PIR:D70436
RefSeq:NP_214083.1 ProteinModelPortal:O67518 GeneID:1193141
KEGG:aae:aq_1578 PATRIC:20960208 HOGENOM:HOG000256552 OMA:MVLFIND
ProtClustDB:CLSK2748471 BioCyc:AAEO224324:GJBH-1125-MONOMER
Uniprot:O67518
Length = 425
Score = 128 (50.1 bits), Expect = 9.1e-16, Sum P(4) = 9.1e-16
Identities = 27/54 (50%), Positives = 36/54 (66%)
Query: 23 ICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNN 76
I AG+VI+ VKELVENSLDA AT +E+ + + G+ +V DNG GI P +
Sbjct: 14 IAAGEVIESPVDVVKELVENSLDAKATKVEVEIVKGGKRLIRVKDNGTGIHPED 67
Score = 89 (36.4 bits), Expect = 9.1e-16, Sum P(4) = 9.1e-16
Identities = 17/56 (30%), Positives = 32/56 (57%)
Query: 765 ACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKNIDEN 820
ACR S+ G L +++++++ +L +P CPHGRP + + + L I + + N
Sbjct: 370 ACRISVKAGQKLSEEKIRELIKTWRNLENPHVCPHGRP-IYYKIPLREIYEKVGRN 424
Score = 79 (32.9 bits), Expect = 9.1e-16, Sum P(4) = 9.1e-16
Identities = 14/41 (34%), Positives = 26/41 (63%)
Query: 618 KVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTV 658
+++GQ + FI+ K + L+ VDQH +E+ N+E+L +
Sbjct: 329 EILGQMDETFILVKDSEYLYFVDQHLLEERINYEKLKDENL 369
Score = 65 (27.9 bits), Expect = 9.1e-16, Sum P(4) = 9.1e-16
Identities = 28/120 (23%), Positives = 53/120 (44%)
Query: 118 SSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPV 177
SSLK+ + VF E + + + + F+S+ Q G+ Y F+N RP+
Sbjct: 201 SSLKERVEEVFQTKT----EEL-YAEREGITLRAFVSR-NQRQGK-----YYVFINKRPI 249
Query: 178 DLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALRE 237
+ + + +++ G + + ++ +P D NV P K++V E L +RE
Sbjct: 250 QNKNLKEFLRKVF-GYKT----LVVLYAELPPFMVDFNVHPKKKEVNILKERKFLELVRE 304
>UNIPROTKB|Q13670 [details] [associations]
symbol:PMS2P11 "Putative postmeiotic segregation increased
2-like protein 11" species:9606 "Homo sapiens" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IBA] [GO:0006298
"mismatch repair" evidence=IBA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IBA] [GO:0016446 "somatic hypermutation of
immunoglobulin genes" evidence=IBA] [GO:0016887 "ATPase activity"
evidence=IBA] [GO:0032300 "mismatch repair complex" evidence=IBA]
[GO:0032389 "MutLalpha complex" evidence=IBA] [GO:0032407
"MutSalpha complex binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] InterPro:IPR002099
InterPro:IPR003594 GO:GO:0005524 GO:GO:0016887 GO:GO:0016301
GO:GO:0006298 GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 GO:GO:0007131 GO:GO:0032407 GO:GO:0016446
eggNOG:NOG84763 GO:GO:0032389 PANTHER:PTHR10073 HSSP:P54278
EMBL:U38980 IPI:IPI00014453 UniGene:Hs.675888
ProteinModelPortal:Q13670 SMR:Q13670 STRING:Q13670
PhosphoSite:Q13670 DMDM:74706325 PaxDb:Q13670 PRIDE:Q13670
GeneCards:GC07P076641 HGNC:HGNC:9125 neXtProt:NX_Q13670
Genevestigator:Q13670 Uniprot:Q13670
Length = 270
Score = 208 (78.3 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 46/97 (47%), Positives = 67/97 (69%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+PI++ VH+IC+G V+ LS+AVKELVENSLDAGAT+I++ LK+YG + +V NGCG
Sbjct: 161 IKPIDRKSVHQICSGPVVLSLSTAVKELVENSLDAGATNIDLKLKDYGMDLIEVSGNGCG 220
Query: 72 ISPNNFK--VRAVFLCQAYALIAKGVRFVCTNTTGKN 106
+ NF+ + + FL A + G+ + C T GK+
Sbjct: 221 VEEENFEGLMMSPFL-PATSRRRLGLDW-CLITMGKS 255
>UNIPROTKB|F1MPG0 [details] [associations]
symbol:MLH1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051257 "spindle midzone assembly involved in meiosis"
evidence=IEA] [GO:0048477 "oogenesis" evidence=IEA] [GO:0045950
"negative regulation of mitotic recombination" evidence=IEA]
[GO:0045190 "isotype switching" evidence=IEA] [GO:0043060 "meiotic
metaphase I plate congression" evidence=IEA] [GO:0032407 "MutSalpha
complex binding" evidence=IEA] [GO:0032389 "MutLalpha complex"
evidence=IEA] [GO:0032137 "guanine/thymine mispair binding"
evidence=IEA] [GO:0016446 "somatic hypermutation of immunoglobulin
genes" evidence=IEA] [GO:0008630 "intrinsic apoptotic signaling
pathway in response to DNA damage" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0007060 "male meiosis
chromosome segregation" evidence=IEA] [GO:0006303 "double-strand
break repair via nonhomologous end joining" evidence=IEA]
[GO:0006298 "mismatch repair" evidence=IEA] [GO:0005712 "chiasma"
evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IEA] [GO:0001673 "male germ cell nucleus" evidence=IEA]
[GO:0000795 "synaptonemal complex" evidence=IEA] [GO:0000712
"resolution of meiotic recombination intermediates" evidence=IEA]
[GO:0000289 "nuclear-transcribed mRNA poly(A) tail shortening"
evidence=IEA] [GO:0000239 "pachytene" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR011186 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 Prosite:PS00058 GO:GO:0005524
GO:GO:0008630 GO:GO:0048477 GO:GO:0007283 GO:GO:0006298
GO:GO:0001673 GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0045190 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0006303 GO:GO:0045950
GO:GO:0000289 GO:GO:0000239 GO:GO:0000712 GO:GO:0000795
GO:GO:0016446 KO:K08734 OMA:SIQVVVK GO:GO:0005712 GO:GO:0032389
InterPro:IPR014762 PANTHER:PTHR10073 PANTHER:PTHR10073:SF11
TIGRFAMs:TIGR00585 CTD:4292 GO:GO:0032137 GO:GO:0007060
GO:GO:0043060 GO:GO:0051257 GeneTree:ENSGT00550000074923
EMBL:DAAA02053630 EMBL:DAAA02053631 IPI:IPI00705361
RefSeq:NP_001069462.2 UniGene:Bt.30133 Ensembl:ENSBTAT00000022288
GeneID:533652 KEGG:bta:533652 NextBio:20876104 ArrayExpress:F1MPG0
Uniprot:F1MPG0
Length = 758
Score = 154 (59.3 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 30/68 (44%), Positives = 50/68 (73%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR +++ VV+RI AG+VI+ ++A+KE++EN LDA +TSI++ +KE G + Q+ DNG G
Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVVVKEGGLKLIQIQDNGTG 67
Query: 72 ISPNNFKV 79
I + ++
Sbjct: 68 IRKEDLEI 75
Score = 131 (51.2 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 53/202 (26%), Positives = 92/202 (45%)
Query: 88 YALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAIC--KSD 145
YA+ G+ F G+ V V +T +++ DNI ++FG + L V C K+
Sbjct: 183 YAVHNSGIGF-SVKKQGETVADV--RTLPNATTVDNIRSIFGNAVSRELIEVE-CEDKTL 238
Query: 146 SCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQ-YPIAIMN 204
+ K+ G++S + + F+N R V+ + K + +Y + +P ++
Sbjct: 239 AFKMNGYISNANYSVKKCIF---LLFINHRLVESASLRKAIETVYAAYLPKSTHPFLYLS 295
Query: 205 FIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASYSVNKVEQLIEPEKS 264
+ + DVNV P K +V F E SIL L++ ++ +NAS + Q + P
Sbjct: 296 LEISPQNVDVNVHPTKHEVHFLHEDSILERLQQHIESRLLGSNASRTY--FTQTLLPGLP 353
Query: 265 GPSSGA-ESCMFLEQLSPDGNG 285
GPS A +S + S G+G
Sbjct: 354 GPSGEAVKSTASVTSSSTAGSG 375
Score = 37 (18.1 bits), Expect = 5.9e-06, Sum P(2) = 5.9e-06
Identities = 14/60 (23%), Positives = 27/60 (45%)
Query: 188 ELYKGANSRQYPIAIMNFIVPTRACDV-------NVTPDKRKVFF---SDECSILHALRE 237
E+ + N P+ I N++ P + V D+ K F S EC++ +++R+
Sbjct: 631 EIDEEGNLVGLPLLIDNYVPPLEGLPIFILRLATEVNWDEEKECFESLSKECAMFYSIRK 690
>UNIPROTKB|Q7SA79 [details] [associations]
symbol:NCU08309 "Putative uncharacterized protein"
species:367110 "Neurospora crassa OR74A" [GO:0000795 "synaptonemal
complex" evidence=IBA] [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0005712 "chiasma" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032390 "MutLbeta complex"
evidence=IBA] [GO:0032407 "MutSalpha complex binding" evidence=IBA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR011186
InterPro:IPR013507 InterPro:IPR014763 Pfam:PF01119 SMART:SM00387
Prosite:PS00018 Prosite:PS00058 GO:GO:0005739 GO:GO:0005524
InterPro:IPR018247 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 GO:GO:0000795 eggNOG:COG0323 EMBL:AABX02000053
HSSP:P23367 KO:K08734 OMA:SIQVVVK GO:GO:0005712 GO:GO:0032389
GO:GO:0032390 InterPro:IPR014762 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585 HOGENOM:HOG000176000
OrthoDB:EOG43XZBN GO:GO:0000713 GO:GO:0000710 GO:GO:0032139
GO:GO:0000404 RefSeq:XP_962522.1 ProteinModelPortal:Q7SA79
STRING:Q7SA79 EnsemblFungi:EFNCRT00000008399 GeneID:3878663
KEGG:ncr:NCU08309 Uniprot:Q7SA79
Length = 751
Score = 167 (63.8 bits), Expect = 1.6e-15, Sum P(3) = 1.6e-15
Identities = 33/77 (42%), Positives = 53/77 (68%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IRP++ VV++I AG++I A+KEL+EN++DAG+TS+EI +K+ G + Q+ DNGCG
Sbjct: 31 IRPLDPDVVNKIAAGEIIVAPVHALKELMENAVDAGSTSLEIVVKDGGLKLLQITDNGCG 90
Query: 72 ISPNNFKVRAVFLCQAY 88
I + + LC+ +
Sbjct: 91 IDKQDLPI----LCERF 103
Score = 116 (45.9 bits), Expect = 1.6e-15, Sum P(3) = 1.6e-15
Identities = 44/158 (27%), Positives = 75/158 (47%)
Query: 88 YALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSC 147
YA+ V F C G++ S+ ++ SS+ D I ++G ++ N E + SD
Sbjct: 213 YAVHCSHVAFSCKKY-GESSTSIAIQANASST--DRIRQIYGGSVAN--ELIEYSTSDDR 267
Query: 148 KVEGFLSKPGQGSGRNLGDRQ---YFFVNDRPVDLPKVSKLVNELYKGANSRQ-YPIAIM 203
GF ++ G + N ++ F+N R V+ + K V + Y + +P +
Sbjct: 268 W--GFKAQ-GLATNANYSLKKTTLLLFINHRCVESSNIRKAVEQTYASFLPKNGHPFVYL 324
Query: 204 NF-IVPTRACDVNVTPDKRKVFFSDECSILHALREGLQ 240
+ I P R DVNV P KR+V F +E I+ A+ E ++
Sbjct: 325 SLEIAPERV-DVNVHPTKREVNFLNEHEIIQAICEHIR 361
Score = 45 (20.9 bits), Expect = 1.6e-15, Sum P(3) = 1.6e-15
Identities = 17/76 (22%), Positives = 39/76 (51%)
Query: 491 KATPLLNVPSIVSSSNDLKKNSEDLSVAASHLQFSGSILDAPVPSSSLDICSTLQFSIQD 550
+ TP N S+V + +++K + L A++ +GS D +PS+S + +T+ + D
Sbjct: 407 RKTPARNESSLVRTDTNMRKITSMLPPAST--MAAGSRGDE-IPSTS-GVKATINGTNMD 462
Query: 551 LRKRRQQRLSIMQSSC 566
+ + + + ++C
Sbjct: 463 VEMIKYETVEREATAC 478
Score = 43 (20.2 bits), Expect = 2.5e-15, Sum P(3) = 2.5e-15
Identities = 16/62 (25%), Positives = 31/62 (50%)
Query: 365 PSRVMAKNITEDGESDSRSRCIQSSLNKF-VTVSKRKYESIARPLTEMPLLRNQSLHCQM 423
P+ MA D E S S +++++N + V KYE++ R T L+ + L ++
Sbjct: 433 PASTMAAGSRGD-EIPSTSG-VKATINGTNMDVEMIKYETVEREATACRLISVRELRAEV 490
Query: 424 KK 425
++
Sbjct: 491 RE 492
>UNIPROTKB|A6VD59 [details] [associations]
symbol:mutL "DNA mismatch repair protein MutL"
species:381754 "Pseudomonas aeruginosa PA7" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] HAMAP:MF_00149
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 InterPro:IPR020667
Pfam:PF01119 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 EMBL:CP000744 GenomeReviews:CP000744_GR
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
eggNOG:COG0323 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032300 KO:K03572 OMA:FLFINNR
ProtClustDB:PRK00095 HOGENOM:HOG000256551 RefSeq:YP_001350994.1
ProteinModelPortal:A6VD59 SMR:A6VD59 STRING:A6VD59 GeneID:5355304
KEGG:pap:PSPA7_5675 PATRIC:19832835
BioCyc:PAER381754:GHMY-5681-MONOMER Uniprot:A6VD59
Length = 633
Score = 123 (48.4 bits), Expect = 1.9e-15, Sum P(3) = 1.9e-15
Identities = 25/66 (37%), Positives = 46/66 (69%)
Query: 7 TNSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVV 66
+ +P I+ ++ + ++I AG+V++ +S KEL+ENSLDAGA I++ +++ G + +V
Sbjct: 2 SEAPRIQLLSPRLANQIAAGEVVERPASVAKELLENSLDAGARRIDVEVEQGGVKLLRVR 61
Query: 67 DNGCGI 72
D+G GI
Sbjct: 62 DDGRGI 67
Score = 102 (41.0 bits), Expect = 1.9e-15, Sum P(3) = 1.9e-15
Identities = 36/114 (31%), Positives = 54/114 (47%)
Query: 162 RNLGDRQYFFVNDRPVDLPKVSKLVNELYKGA--NSRQYPIAIMNFIVPTRACDVNVTPD 219
R+ D QYF+VN R V V+ V + Y+ N R +P ++ F V DVNV P
Sbjct: 251 RSQPDLQYFYVNGRMVRDKLVAHAVRQAYRDVLYNGR-HPTFVLFFEVDPAVVDVNVHPT 309
Query: 220 KRKVFFSDECSI---LHA-LREGLQEIYSPNNASYSVNKVEQLIEPEKSGPSSG 269
K +V F D + L+ L L E+ P++ + L EP +G ++G
Sbjct: 310 KHEVRFRDSRMVHDFLYGTLHRALGEV-RPDD-QLAPPGATSLTEPRPTGAAAG 361
Score = 102 (41.0 bits), Expect = 1.9e-15, Sum P(3) = 1.9e-15
Identities = 44/184 (23%), Positives = 77/184 (41%)
Query: 627 FIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDI 686
+I+ + L +VD HAA E+ +ERL + + ++ +PL L PE V+ D
Sbjct: 454 YILAENAHGLVLVDMHAAHERITYERLKVA-MASEGLRGQPL---LVPESIAVSEREADC 509
Query: 687 IRKNG--FS-LEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISS 743
++ F L + L ++ +P K + V+D+I+ L +
Sbjct: 510 AEEHSGWFQRLGFELQRLGPETLAIRQIPALLKQAEATQLVRDVIADLLE---------- 559
Query: 744 YKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPT 803
Y T+D + + + +L + AC ++ L EM +L + C HGRPT
Sbjct: 560 Y--GTSDRI-QAHLNELLGTMACHGAVRANRRLTLPEMNALLRDMEITERSGQCNHGRPT 616
Query: 804 MRHL 807
L
Sbjct: 617 WTQL 620
>UNIPROTKB|E1BQE0 [details] [associations]
symbol:MLH1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0000239
"pachytene" evidence=IEA] [GO:0000289 "nuclear-transcribed mRNA
poly(A) tail shortening" evidence=IEA] [GO:0000712 "resolution of
meiotic recombination intermediates" evidence=IEA] [GO:0000795
"synaptonemal complex" evidence=IEA] [GO:0001673 "male germ cell
nucleus" evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IEA] [GO:0005712 "chiasma" evidence=IEA] [GO:0006298
"mismatch repair" evidence=IEA] [GO:0006303 "double-strand break
repair via nonhomologous end joining" evidence=IEA] [GO:0007060
"male meiosis chromosome segregation" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0008630 "intrinsic apoptotic
signaling pathway in response to DNA damage" evidence=IEA]
[GO:0016446 "somatic hypermutation of immunoglobulin genes"
evidence=IEA] [GO:0032137 "guanine/thymine mispair binding"
evidence=IEA] [GO:0032389 "MutLalpha complex" evidence=IEA]
[GO:0032407 "MutSalpha complex binding" evidence=IEA] [GO:0043060
"meiotic metaphase I plate congression" evidence=IEA] [GO:0045190
"isotype switching" evidence=IEA] [GO:0045950 "negative regulation
of mitotic recombination" evidence=IEA] [GO:0048477 "oogenesis"
evidence=IEA] [GO:0051257 "spindle midzone assembly involved in
meiosis" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR011186 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 Prosite:PS00058 GO:GO:0005524
GO:GO:0008630 GO:GO:0006298 GO:GO:0001673 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0006303
GO:GO:0045950 GO:GO:0000289 GO:GO:0000239 GO:GO:0000712
GO:GO:0000795 KO:K08734 OMA:SIQVVVK GO:GO:0005712 GO:GO:0032389
InterPro:IPR014762 PANTHER:PTHR10073 PANTHER:PTHR10073:SF11
TIGRFAMs:TIGR00585 CTD:4292 GO:GO:0032137 GO:GO:0007060
GO:GO:0043060 GO:GO:0051257 GeneTree:ENSGT00550000074923
EMBL:AADN02001321 IPI:IPI00594951 RefSeq:XP_418828.1
UniGene:Gga.10857 ProteinModelPortal:E1BQE0
Ensembl:ENSGALT00000019702 GeneID:420729 KEGG:gga:420729
NextBio:20823604 Uniprot:E1BQE0
Length = 757
Score = 165 (63.1 bits), Expect = 8.9e-15, Sum P(2) = 8.9e-15
Identities = 32/68 (47%), Positives = 50/68 (73%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR +++ VV+RI AG+VI+ ++A+KE++EN LDA +TSI++ +KE G + QV DNGCG
Sbjct: 8 IRRLDEAVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVVVKEGGLKLIQVQDNGCG 67
Query: 72 ISPNNFKV 79
I + +
Sbjct: 68 IRKEDLHI 75
Score = 111 (44.1 bits), Expect = 8.9e-15, Sum P(2) = 8.9e-15
Identities = 39/165 (23%), Positives = 76/165 (46%)
Query: 88 YALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSC 147
YA+ G+ F G V V +T +++ DNI ++FG + L V C+ +
Sbjct: 183 YAIHNSGISF-SVKKQGDTVSDV--RTLSNATTVDNIRSIFGNAVSRELIEVG-CEDANL 238
Query: 148 --KVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQ-YPIAIMN 204
K++G+++ + + F+N R V+ + K + +Y + +P ++
Sbjct: 239 AFKMKGYITNANYSVKKCIF---LLFINHRLVESTALRKAIETVYAAYLPKSTHPFLYLS 295
Query: 205 FIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNAS 249
+ + DVNV P K +V F E SIL +++ ++ +N+S
Sbjct: 296 LEIAPKNVDVNVHPTKHEVHFLHEDSILERVQQHVESKLLGSNSS 340
>CGD|CAL0003904 [details] [associations]
symbol:orf19.7257 species:5476 "Candida albicans" [GO:0032390
"MutLbeta complex" evidence=IEA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IEA] [GO:0006298 "mismatch repair"
evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR014790 Pfam:PF08676 SMART:SM00387 SMART:SM00853
CGD:CAL0003904 GO:GO:0005524 GO:GO:0006298 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 eggNOG:COG0323 EMBL:AACQ01000092
PANTHER:PTHR10073 KO:K08739 RefSeq:XP_715055.1
ProteinModelPortal:Q59ZT5 STRING:Q59ZT5 GeneID:3643294
KEGG:cal:CaO19.7257 Uniprot:Q59ZT5
Length = 636
Score = 174 (66.3 bits), Expect = 9.2e-15, Sum P(3) = 9.2e-15
Identities = 55/202 (27%), Positives = 94/202 (46%)
Query: 616 RMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLR---PLKLDL 672
+ +VI Q + FI+ D L ++DQHA+DE+ E+ Q V P LR P+ +
Sbjct: 438 KFRVINQVDRKFILLAADDQLVVLDQHASDERIRVEQYLQEFVSQPNPGLRLHSPIAFGV 497
Query: 673 TPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKD-LISTL 731
E ++ + G D + L + K+ E +KD L+
Sbjct: 498 HASELMLFDQYAANFNSFGICYTTDTAQVVITHLPLILLT---KVEDDAEFLKDSLLQHC 554
Query: 732 ADNQGECSIIS-SYK--MDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHL 788
D IS ++ +T+ + P + ++ S+ACRS+IM GD L ++EMQ ++ L
Sbjct: 555 YDLHDHVKRISPNFDNWFETSYHL-PRIITELINSKACRSAIMFGDILTKDEMQDLVNKL 613
Query: 789 ADLNSPWNCPHGRPTMRHLVDL 810
+ P+ C HGRP++ + +L
Sbjct: 614 SRCKLPFQCAHGRPSIVPIANL 635
Score = 104 (41.7 bits), Expect = 9.2e-15, Sum P(3) = 9.2e-15
Identities = 24/73 (32%), Positives = 44/73 (60%)
Query: 6 PTNSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQV 65
P ++ +R +++ V+ +I + + L S V+EL++NSLDAGA I I + + +
Sbjct: 22 PLSTMILR-LDESVITQIRSHTIFHSLDSVVRELLQNSLDAGANEITIKI-DLSSLSVYI 79
Query: 66 VDNGCGISPNNFK 78
DNG GI+P++ +
Sbjct: 80 HDNGTGITPDDLE 92
Score = 56 (24.8 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 43/164 (26%), Positives = 68/164 (41%)
Query: 50 SIEIALKEYGEEWFQVVD-NGCG---ISPNNFK---VRAVFL-CQAYALIAKGVRFVCTN 101
S+ EY +FQ+ D N G I+ N F+ VR + +A + + ++
Sbjct: 140 SVAELYNEYSGGYFQIGDINPQGTVVIAANMFRNIPVRREQIRTTPHAKLVEAIKVAVLE 199
Query: 102 TTGKNVKSVVLKT--QGSSSLK-DNIITVFG--------MNIYNCLEPVAICKSDSCKVE 150
+ N + V LK ++L+ D I+ + G + EPV K + KV
Sbjct: 200 SLTPNAR-VNLKIFLVNHTTLQLDQIVAICGHSPLLFQLFGVKTKFEPVR-AKFKNIKVV 257
Query: 151 GFLSKPGQGSGRNLGDRQYFFVNDRPVDLPK-VSKLVNELYKGA 193
G + G QY FVNDR V L SK +N+L+ +
Sbjct: 258 GVI-----GREPITAKHQYVFVNDRRVTLSLGESKRLNDLFSSS 296
Score = 39 (18.8 bits), Expect = 9.2e-15, Sum P(3) = 9.2e-15
Identities = 13/35 (37%), Positives = 16/35 (45%)
Query: 298 GNTPKTVEVDTLHSDALEGLVHSSNENGKGNFTLK 332
G TP +E TL + HS N G+ F LK
Sbjct: 85 GITPDDLEKVTLQHYTSKW--HSHNYKGEALFALK 117
>ZFIN|ZDB-GENE-040426-1600 [details] [associations]
symbol:mlh1 "mutL homolog 1, colon cancer,
nonpolyposis type 2 (E. coli)" species:7955 "Danio rerio"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA;IBA]
[GO:0030983 "mismatched DNA binding" evidence=IEA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0032389 "MutLalpha complex"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032390 "MutLbeta complex" evidence=IBA] [GO:0032300 "mismatch
repair complex" evidence=IBA] [GO:0032407 "MutSalpha complex
binding" evidence=IBA] [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0000795 "synaptonemal complex" evidence=IBA]
[GO:0005712 "chiasma" evidence=IBA] [GO:0016446 "somatic
hypermutation of immunoglobulin genes" evidence=IBA] [GO:0007131
"reciprocal meiotic recombination" evidence=IBA] [GO:0007141 "male
meiosis I" evidence=IMP] [GO:0043060 "meiotic metaphase I plate
congression" evidence=IMP] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0051026 "chiasma assembly" evidence=IMP]
[GO:0007059 "chromosome segregation" evidence=IMP]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR011186
InterPro:IPR013507 InterPro:IPR014763 Pfam:PF01119 SMART:SM00387
Prosite:PS00058 ZFIN:ZDB-GENE-040426-1600 GO:GO:0005524
GO:GO:0007283 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 GO:GO:0007141 GO:GO:0051026 GO:GO:0000795
GO:GO:0016446 OMA:SIQVVVK GO:GO:0005712 GO:GO:0032389 GO:GO:0032390
InterPro:IPR014762 PANTHER:PTHR10073 PANTHER:PTHR10073:SF11
TIGRFAMs:TIGR00585 HOGENOM:HOG000176000 HOVERGEN:HBG006374
GO:GO:0043060 GeneTree:ENSGT00550000074923 EMBL:BX936318
IPI:IPI00614918 UniGene:Dr.77529 Ensembl:ENSDART00000133388
Uniprot:B8A6F5
Length = 725
Score = 143 (55.4 bits), Expect = 9.8e-15, Sum P(2) = 9.8e-15
Identities = 28/68 (41%), Positives = 50/68 (73%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR +++ VV+RI AG++I+ ++A+KE++EN LDA +T+I+I +KE G + + DNG G
Sbjct: 6 IRRLDETVVNRIAAGEIIQRPANAIKEMMENCLDAKSTNIQITVKEGGLKLILIQDNGTG 65
Query: 72 ISPNNFKV 79
I ++ ++
Sbjct: 66 IRKDDMEI 73
Score = 133 (51.9 bits), Expect = 9.8e-15, Sum P(2) = 9.8e-15
Identities = 52/203 (25%), Positives = 94/203 (46%)
Query: 73 SPNNFKVRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNI 132
SP+ R V + YA+ G F G+ V V KT ++S+ DNI VFG+ +
Sbjct: 166 SPSEEYSRIVEVVSRYAIHNSGKSF-SVKKQGEMVADV--KTLPNASVLDNIRVVFGVAV 222
Query: 133 YNCLEPVAICKSD--SCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELY 190
L V C+ + KV+G++S + + F+N R V+ + K + +Y
Sbjct: 223 SRELIEVE-CEDQKFAFKVKGYISNANYSVKKCI---LILFINHRLVESSALKKAIETVY 278
Query: 191 KGANSRQ-YPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNAS 249
+ +P ++ + + DVNV P K +V F E SI+ ++++ ++ +N+S
Sbjct: 279 TAYLPKNTHPFLYLSLEIAPQNIDVNVHPTKHEVHFLHEDSIIESIQKHIESKLLGSNSS 338
Query: 250 YSVNKVEQLIEPEKSGPSSGAES 272
+ Q + P S +S A++
Sbjct: 339 RTY--FTQTLLPGLSASASVAKA 359
>UNIPROTKB|Q755L3 [details] [associations]
symbol:AFL199C "AFL199Cp" species:284811 "Ashbya gossypii
ATCC 10895" [GO:0000795 "synaptonemal complex" evidence=IBA]
[GO:0003697 "single-stranded DNA binding" evidence=IBA] [GO:0005712
"chiasma" evidence=IBA] [GO:0006200 "ATP catabolic process"
evidence=IBA] [GO:0006298 "mismatch repair" evidence=IBA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IBA]
[GO:0016887 "ATPase activity" evidence=IBA] [GO:0032300 "mismatch
repair complex" evidence=IBA] [GO:0032389 "MutLalpha complex"
evidence=IBA] [GO:0032390 "MutLbeta complex" evidence=IBA]
[GO:0032407 "MutSalpha complex binding" evidence=IBA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR011186
InterPro:IPR013507 InterPro:IPR014763 Pfam:PF01119 SMART:SM00387
Prosite:PS00058 GO:GO:0005739 GO:GO:0005524 GO:GO:0016887
GO:GO:0006298 GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407 GO:GO:0000795
EMBL:AE016819 GenomeReviews:AE016819_GR HSSP:P23367 KO:K08734
OMA:SIQVVVK GO:GO:0005712 GO:GO:0032389 GO:GO:0032390
InterPro:IPR014762 PANTHER:PTHR10073 PANTHER:PTHR10073:SF11
TIGRFAMs:TIGR00585 HOGENOM:HOG000176000 OrthoDB:EOG43XZBN
GO:GO:0000713 GO:GO:0000710 GO:GO:0032139 GO:GO:0000404
RefSeq:NP_985351.1 ProteinModelPortal:Q755L3 STRING:Q755L3
EnsemblFungi:AAS53175 GeneID:4621576 KEGG:ago:AGOS_AFL199C
PhylomeDB:Q755L3 Uniprot:Q755L3
Length = 771
Score = 157 (60.3 bits), Expect = 1.3e-14, Sum P(3) = 1.3e-14
Identities = 30/77 (38%), Positives = 53/77 (68%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ + VV++I AG++I +A+KE++ENS+DAGAT+++I +K+ G + Q+ DNGCG
Sbjct: 49 IKALEASVVNKIAAGEIIISPVNALKEMMENSIDAGATNVDILVKDGGIKMLQISDNGCG 108
Query: 72 ISPNNFKVRAVFLCQAY 88
I ++ + LC+ +
Sbjct: 109 IMKDDLPI----LCERF 121
Score = 122 (48.0 bits), Expect = 1.3e-14, Sum P(3) = 1.3e-14
Identities = 48/182 (26%), Positives = 78/182 (42%)
Query: 73 SPNNFKVRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNI 132
SP+ + V + YA+ + GV F C G+ L +G+SS D I VFG +
Sbjct: 209 SPSEEFAKIVDVVGKYAIHSDGVGFSCKKF-GET--QYALNVRGTSSKSDKIRAVFGAPV 265
Query: 133 YNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQ----YFFVNDRPVDLPKVSKLVNE 188
L V I G S GQ + + +++ FF+N+R V + + +++
Sbjct: 266 VANLVEVDISADPE---HGLTSSSGQITTPDFNNKKSIPAVFFINNRLVSCDPLRRALSQ 322
Query: 189 LYKGANSR-QYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNN 247
+Y + P M+ + DVNV P KR+V F E ++ + L E S +
Sbjct: 323 VYSNFLPKGNKPFIYMSLHITPENVDVNVHPTKREVRFLYEEELIERIGNLLHERLSQLD 382
Query: 248 AS 249
S
Sbjct: 383 TS 384
Score = 41 (19.5 bits), Expect = 1.3e-14, Sum P(3) = 1.3e-14
Identities = 16/64 (25%), Positives = 30/64 (46%)
Query: 381 SRSRCIQSSLNKFVTVSKRKYESIARPLTEMPLLR---NQSLHCQMKKSNSDMDAVDTRS 437
++SR I + LN V +R+ + LT + L+ ++ +H ++ +DM V
Sbjct: 490 TKSRAILTLLNNEYEVVQRERTEVN--LTSIKTLKQEVDEDMHKELTSVFADMTYVGVVD 547
Query: 438 PVRR 441
RR
Sbjct: 548 ATRR 551
>SGD|S000004777 [details] [associations]
symbol:MLH1 "Protein required for mismatch repair in mitosis
and meiosis" species:4932 "Saccharomyces cerevisiae" [GO:0000710
"meiotic mismatch repair" evidence=IMP] [GO:0006298 "mismatch
repair" evidence=IEA;IMP] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0030983 "mismatched DNA binding" evidence=IEA] [GO:0000404
"loop DNA binding" evidence=IDA] [GO:0032135 "DNA insertion or
deletion binding" evidence=IDA] [GO:0032139 "dinucleotide insertion
or deletion binding" evidence=IDA] [GO:0003697 "single-stranded DNA
binding" evidence=IDA] [GO:0003690 "double-stranded DNA binding"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=IMP;IDA]
[GO:0005524 "ATP binding" evidence=IEA;IMP] [GO:0007131 "reciprocal
meiotic recombination" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0000713
"meiotic heteroduplex formation" evidence=IMP] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005712 "chiasma" evidence=IBA]
[GO:0000795 "synaptonemal complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IPI] [GO:0032390 "MutLbeta complex"
evidence=IPI] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR011186 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 SGD:S000004777 Prosite:PS00058
GO:GO:0005739 GO:GO:0005524 GO:GO:0016887 EMBL:BK006946
Gene3D:3.30.565.10 SUPFAM:SSF55874 EMBL:Z49705 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0000795 KO:K08734 OMA:SIQVVVK
GO:GO:0005712 GO:GO:0032389 GO:GO:0032390 InterPro:IPR014762
PANTHER:PTHR10073 PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585
GeneTree:ENSGT00550000074923 OrthoDB:EOG43XZBN EMBL:U07187
EMBL:DQ356633 EMBL:DQ356634 EMBL:DQ356635 EMBL:DQ356636
EMBL:DQ356637 EMBL:DQ356638 EMBL:DQ356639 EMBL:DQ356640
EMBL:DQ356641 EMBL:DQ356642 EMBL:DQ356643 EMBL:DQ356644
EMBL:DQ356645 EMBL:DQ356646 PIR:S54525 RefSeq:NP_013890.1
ProteinModelPortal:P38920 SMR:P38920 DIP:DIP-2412N IntAct:P38920
MINT:MINT-625234 STRING:P38920 EnsemblFungi:YMR167W GeneID:855203
KEGG:sce:YMR167W CYGD:YMR167w NextBio:978693 Genevestigator:P38920
GermOnline:YMR167W GO:GO:0000713 GO:GO:0000710 Uniprot:P38920
Length = 769
Score = 143 (55.4 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 30/77 (38%), Positives = 51/77 (66%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ ++ VV++I AG++I +A+KE++ENS+DA AT I+I +KE G + Q+ DNG G
Sbjct: 5 IKALDASVVNKIAAGEIIISPVNALKEMMENSIDANATMIDILVKEGGIKVLQITDNGSG 64
Query: 72 ISPNNFKVRAVFLCQAY 88
I+ + + LC+ +
Sbjct: 65 INKADLPI----LCERF 77
Score = 131 (51.2 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 85/380 (22%), Positives = 144/380 (37%)
Query: 88 YALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSC 147
YA+ +K + F C N L + S +++D I TVF ++ + L I K +
Sbjct: 180 YAIHSKDIGFSCKKFGDSNYS---LSVKPSYTVQDRIRTVFNKSVASNLITFHISKVEDL 236
Query: 148 KVEGFLSKPGQGSGRNLGDRQ----YFFVNDRPVDLPKVSKLVNELYKGANSR-QYPIAI 202
+E S G+ N ++ FF+N+R V + + +N +Y + P
Sbjct: 237 NLE---SVDGKVCNLNFISKKSISPIFFINNRLVTCDLLRRALNSVYSNYLPKGNRPFIY 293
Query: 203 MNFIVPTRACDVNVTPDKRKVFF--SDE-----CSILHALREGLQEIYSPNNASYSVNKV 255
+ ++ A DVNV P KR+V F DE + LHA + + +S S NK
Sbjct: 294 LGIVIDPAAVDVNVHPTKREVRFLSQDEIIEKIANQLHAELSAIDTSRTFKASSISTNKP 353
Query: 256 EQLIEPEKSGPSSGAESCMFLEQLSPDGNGCIEILNEQQISKGNTPKTVEVDTLHSDALE 315
E LI P S L Q N ++ + +K K V +D +
Sbjct: 354 ESLI-PFNDTIESDRNR-KSLRQAQVVENSYTTANSQLRKAKRQENKLVRIDASQAKITS 411
Query: 316 GLVHSSNENGKGNFTLKAHDDKSADRLSKFN-CMKL-IGPHNVPTEENCPSPSRVMAKNI 373
L S N +G+ T + + +S KL + P + N + + + +
Sbjct: 412 FLSSSQQFNFEGSSTKRQLSEPKVTNVSHSQEAEKLTLNESEQPRDANTINDNDLKDQPK 471
Query: 374 TEDGESDSRSRCIQSSLNKFVTVSKRKYESIARPLTEMPLLRNQSLHCQMKKSNSDMDAV 433
+ D + I + +SK Y + + + L +KK +D
Sbjct: 472 KKQKLGDYKVPSIADDEKNALPISKDGYIRVPKERVNVNLT-------SIKKLREKVD-- 522
Query: 434 DTRSPVRRHLVDDIAKLNKI 453
D+ + R L D A LN +
Sbjct: 523 DS---IHRELTDIFANLNYV 539
>UNIPROTKB|E2RBM6 [details] [associations]
symbol:MLH1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051257 "spindle midzone assembly involved in
meiosis" evidence=IEA] [GO:0048477 "oogenesis" evidence=IEA]
[GO:0045950 "negative regulation of mitotic recombination"
evidence=IEA] [GO:0045190 "isotype switching" evidence=IEA]
[GO:0043060 "meiotic metaphase I plate congression" evidence=IEA]
[GO:0032407 "MutSalpha complex binding" evidence=IEA] [GO:0032389
"MutLalpha complex" evidence=IEA] [GO:0032137 "guanine/thymine
mispair binding" evidence=IEA] [GO:0016446 "somatic hypermutation
of immunoglobulin genes" evidence=IEA] [GO:0008630 "intrinsic
apoptotic signaling pathway in response to DNA damage"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0007060 "male meiosis chromosome segregation" evidence=IEA]
[GO:0006303 "double-strand break repair via nonhomologous end
joining" evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0005712 "chiasma" evidence=IEA] [GO:0003697 "single-stranded
DNA binding" evidence=IEA] [GO:0001673 "male germ cell nucleus"
evidence=IEA] [GO:0000795 "synaptonemal complex" evidence=IEA]
[GO:0000712 "resolution of meiotic recombination intermediates"
evidence=IEA] [GO:0000289 "nuclear-transcribed mRNA poly(A) tail
shortening" evidence=IEA] [GO:0000239 "pachytene" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR011186 InterPro:IPR013507
InterPro:IPR014763 Pfam:PF01119 SMART:SM00387 Prosite:PS00058
GO:GO:0005524 GO:GO:0008630 GO:GO:0048477 GO:GO:0007283
GO:GO:0006298 GO:GO:0001673 GO:GO:0003697 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0045190 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0006303 GO:GO:0045950
GO:GO:0000289 GO:GO:0000239 GO:GO:0000712 GO:GO:0000795
GO:GO:0016446 KO:K08734 OMA:SIQVVVK GO:GO:0005712 GO:GO:0032389
InterPro:IPR014762 PANTHER:PTHR10073 PANTHER:PTHR10073:SF11
TIGRFAMs:TIGR00585 CTD:4292 GO:GO:0032137 GO:GO:0007060
GO:GO:0043060 GO:GO:0051257 GeneTree:ENSGT00550000074923
EMBL:AAEX03013477 RefSeq:XP_534219.2 Ensembl:ENSCAFT00000007703
GeneID:477019 KEGG:cfa:477019 Uniprot:E2RBM6
Length = 757
Score = 152 (58.6 bits), Expect = 3.3e-14, Sum P(2) = 3.3e-14
Identities = 30/68 (44%), Positives = 49/68 (72%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR +++ VV+RI AG+VI+ ++A+KE++EN LDA +TSI++ +KE G + Q+ DNG G
Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVVVKEGGLKLIQIQDNGTG 67
Query: 72 ISPNNFKV 79
I + +
Sbjct: 68 IRKEDLDI 75
Score = 119 (46.9 bits), Expect = 3.3e-14, Sum P(2) = 3.3e-14
Identities = 45/183 (24%), Positives = 84/183 (45%)
Query: 88 YALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAIC--KSD 145
Y++ G+ F G+ V V +T +++ DNI ++FG + L V C K+
Sbjct: 183 YSIHNSGISF-SVKKQGETVADV--RTLPNATTVDNIRSIFGNAVSRELIEVG-CEDKTL 238
Query: 146 SCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQ-YPIAIMN 204
+ K+ G++S + + F+N R V+ + K + +Y + +P ++
Sbjct: 239 AFKMNGYISNANYSVKKCIF---LLFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLS 295
Query: 205 FIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASYSVNKVEQLIEPEKS 264
+ + DVNV P K +V F E SIL +++ ++ +N+S Q + P +
Sbjct: 296 LEISPQNVDVNVHPTKHEVHFLHEDSILERVQQHIESKLLGSNSSRMY--FTQTLLPGLA 353
Query: 265 GPS 267
GPS
Sbjct: 354 GPS 356
Score = 48 (22.0 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 45/221 (20%), Positives = 92/221 (41%)
Query: 334 HDDKSADRLSKFNCMKLIGPHNVP---TEENCPS---PSRVMAKNITEDGESDSRSRCIQ 387
H+D +R+ + KL+G ++ T+ P PS + K+ T S + S
Sbjct: 318 HEDSILERVQQHIESKLLGSNSSRMYFTQTLLPGLAGPSGEVVKSTTGATPSSTGSGDKV 377
Query: 388 SSLNKFVTVSK-RKYESIARPLTEMPLLRNQSLHCQMKKSNSDMDAVDTRSPVRRHLV-- 444
+ T S+ +K ++ +P+++ L +Q L + + +D+ + T
Sbjct: 378 YAHQMVRTDSREQKLDAFLQPMSKA--LSSQ-LQAVVPEDRTDVSSGRTGQQDEEMFELP 434
Query: 445 --DDIAKLNKIEPFKCNKADKVSKEIENILSSEGNTNEKPRE----ELVTQEK------- 491
D +A N+ + + + E + SS GN ++PRE E+V +
Sbjct: 435 EPDQVAATNQGMEEETTEGTSETSEKKGPPSSPGNPRKRPRESSDVEMVEDDSRKDMTAA 494
Query: 492 ATP---LLNVPSIVSSSNDL-KKNSEDLSVAASHLQFSGSI 528
TP ++N+ S++S ++ ++ E L + F G +
Sbjct: 495 CTPRRRIINLTSVLSLQEEINERGHETLREMLHNHSFVGCV 535
Score = 37 (18.1 bits), Expect = 9.5e-06, Sum P(2) = 9.5e-06
Identities = 14/60 (23%), Positives = 27/60 (45%)
Query: 188 ELYKGANSRQYPIAIMNFIVPTRACDV-------NVTPDKRKVFF---SDECSILHALRE 237
E+ + N P+ I N++ P + V D+ K F S EC++ +++R+
Sbjct: 630 EIDEEGNLIGLPLLIDNYVPPLEGLPIFILRLATEVNWDEEKECFESLSKECAMFYSIRK 689
>MGI|MGI:101938 [details] [associations]
symbol:Mlh1 "mutL homolog 1 (E. coli)" species:10090 "Mus
musculus" [GO:0000289 "nuclear-transcribed mRNA poly(A) tail
shortening" evidence=IMP] [GO:0000712 "resolution of meiotic
recombination intermediates" evidence=IMP] [GO:0000793 "condensed
chromosome" evidence=IDA;IMP] [GO:0000794 "condensed nuclear
chromosome" evidence=IDA] [GO:0000795 "synaptonemal complex"
evidence=ISS;IDA] [GO:0001673 "male germ cell nucleus"
evidence=IDA] [GO:0002204 "somatic recombination of immunoglobulin
genes involved in immune response" evidence=IGI] [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005694 "chromosome" evidence=IDA] [GO:0005712 "chiasma"
evidence=IDA] [GO:0006281 "DNA repair" evidence=IMP] [GO:0006298
"mismatch repair" evidence=ISO;IDA;IMP] [GO:0006303 "double-strand
break repair via nonhomologous end joining" evidence=IMP]
[GO:0006974 "response to DNA damage stimulus" evidence=IGI;IMP]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007060 "male meiosis
chromosome segregation" evidence=IMP] [GO:0007126 "meiosis"
evidence=IDA;TAS] [GO:0007129 "synapsis" evidence=IMP] [GO:0007131
"reciprocal meiotic recombination" evidence=IMP] [GO:0007140 "male
meiosis" evidence=IMP] [GO:0007283 "spermatogenesis" evidence=IMP]
[GO:0008630 "intrinsic apoptotic signaling pathway in response to
DNA damage" evidence=IMP] [GO:0016446 "somatic hypermutation of
immunoglobulin genes" evidence=IMP] [GO:0016447 "somatic
recombination of immunoglobulin gene segments" evidence=IMP]
[GO:0016887 "ATPase activity" evidence=IBA] [GO:0030983 "mismatched
DNA binding" evidence=IEA] [GO:0032137 "guanine/thymine mispair
binding" evidence=ISO;IGI] [GO:0032389 "MutLalpha complex"
evidence=IDA] [GO:0032390 "MutLbeta complex" evidence=IBA]
[GO:0032407 "MutSalpha complex binding" evidence=IBA] [GO:0043060
"meiotic metaphase I plate congression" evidence=IMP] [GO:0043566
"structure-specific DNA binding" evidence=IDA] [GO:0045132 "meiotic
chromosome segregation" evidence=IMP] [GO:0045190 "isotype
switching" evidence=IMP] [GO:0045950 "negative regulation of
mitotic recombination" evidence=IMP] [GO:0048477 "oogenesis"
evidence=IMP] [GO:0051257 "spindle midzone assembly involved in
meiosis" evidence=IMP] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR011186 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 MGI:MGI:101938 Prosite:PS00058
GO:GO:0005524 GO:GO:0008630 GO:GO:0005654 GO:GO:0042493
GO:GO:0009636 GO:GO:0001666 GO:GO:0048477 GO:GO:0007283
GO:GO:0016887 GO:GO:0006298 Reactome:REACT_120463 GO:GO:0001673
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0045190
GO:GO:0071407 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 Reactome:REACT_27235
GO:GO:0006303 GO:GO:0032407 GO:GO:0045950 GO:GO:0000289
GO:GO:0000239 GO:GO:0000712 GO:GO:0000795 GO:GO:0016446
eggNOG:COG0323 KO:K08734 OMA:SIQVVVK GO:GO:0005712 GO:GO:0032389
GO:GO:0032390 InterPro:IPR014762 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585 CTD:4292
HOGENOM:HOG000176000 HOVERGEN:HBG006374 OrthoDB:EOG43N7C7
ChiTaRS:Mlh1 GO:GO:0032137 GO:GO:0007060 GO:GO:0043060
GO:GO:0051257 EMBL:AF250844 EMBL:AK168849 EMBL:U60872 EMBL:U59881
EMBL:U59882 EMBL:U59883 EMBL:U59884 IPI:IPI00122425
RefSeq:NP_081086.2 UniGene:Mm.486383 ProteinModelPortal:Q9JK91
SMR:Q9JK91 STRING:Q9JK91 PhosphoSite:Q9JK91 PaxDb:Q9JK91
PRIDE:Q9JK91 Ensembl:ENSMUST00000035079 GeneID:17350 KEGG:mmu:17350
GeneTree:ENSGT00550000074923 InParanoid:Q3TG77 NextBio:291948
Bgee:Q9JK91 CleanEx:MM_MLH1 Genevestigator:Q9JK91
GermOnline:ENSMUSG00000032498 Uniprot:Q9JK91
Length = 760
Score = 149 (57.5 bits), Expect = 4.4e-14, Sum P(2) = 4.4e-14
Identities = 29/68 (42%), Positives = 49/68 (72%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR +++ VV+RI AG+VI+ ++A+KE++EN LDA +T+I++ +KE G + Q+ DNG G
Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTNIQVVVKEGGLKLIQIQDNGTG 67
Query: 72 ISPNNFKV 79
I + +
Sbjct: 68 IRKEDLDI 75
Score = 121 (47.7 bits), Expect = 4.4e-14, Sum P(2) = 4.4e-14
Identities = 49/202 (24%), Positives = 90/202 (44%)
Query: 88 YALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAIC--KSD 145
Y++ G+ F G+ V V +T +++ DNI ++FG + L V C K+
Sbjct: 183 YSIHNSGISF-SVKKQGETVSDV--RTLPNATTVDNIRSIFGNAVSRELIEVG-CEDKTL 238
Query: 146 SCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQ-YPIAIMN 204
+ K+ G++S + + F+N R V+ + K + +Y + +P ++
Sbjct: 239 AFKMNGYISNANYSVKKCIF---LLFINHRLVESAALRKAIETVYAAYLPKNTHPFLYLS 295
Query: 205 FIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASYSVNKVEQLIEPEKS 264
+ + DVNV P K +V F E SIL +++ ++ +N+S Q + P +
Sbjct: 296 LEISPQNVDVNVHPTKHEVHFLHEESILQRVQQHIESKLLGSNSSRMY--FTQTLLPGLA 353
Query: 265 GPSS-GAESCMFLEQLSPDGNG 285
GPS A + S G+G
Sbjct: 354 GPSGEAARPTTGVASSSTSGSG 375
>UNIPROTKB|Q3KLC2 [details] [associations]
symbol:mutL "DNA mismatch repair protein MutL"
species:315277 "Chlamydia trachomatis A/HAR-13" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] HAMAP:MF_00149
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 InterPro:IPR020667
Pfam:PF01119 Pfam:PF02518 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:CP000051 GenomeReviews:CP000051_GR
eggNOG:COG0323 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032300 HOGENOM:HOG000256550 KO:K03572
ProtClustDB:PRK00095 RefSeq:YP_328398.1 ProteinModelPortal:Q3KLC2
STRING:Q3KLC2 GeneID:3687613 KEGG:cta:CTA_0625 PATRIC:32023166
OMA:RRGFQKS BioCyc:CTRA315277:GI4C-650-MONOMER Uniprot:Q3KLC2
Length = 576
Score = 136 (52.9 bits), Expect = 6.0e-14, Sum P(2) = 6.0e-14
Identities = 33/72 (45%), Positives = 44/72 (61%)
Query: 9 SPT-IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVD 67
SP+ IR ++ V++I AG+VI++ +S VKEL+ENSLDAGA I I G V D
Sbjct: 4 SPSRIRLLDSVTVNQISAGEVIENAASVVKELIENSLDAGADEIHIETLGGGRGQIVVRD 63
Query: 68 NGCGISPNNFKV 79
NG G+ P V
Sbjct: 64 NGVGMDPEEVPV 75
Score = 130 (50.8 bits), Expect = 6.0e-14, Sum P(2) = 6.0e-14
Identities = 33/95 (34%), Positives = 47/95 (49%)
Query: 148 KVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGA-NSRQYPIAIMNFI 206
+V GFL P Q G R F+N+R V+ +SK V E Y +++YPI ++
Sbjct: 235 RVLGFLGSPNQHRSTRQGQR--LFINNRAVESSFISKKVAEAYAWMIPAQRYPIFVLKLF 292
Query: 207 VPTRACDVNVTPDKRKVFFSDECSILHALREGLQE 241
+P CD NV P K +V E I + L E + E
Sbjct: 293 LPPMWCDFNVHPQKTEVRLLQEGQISNLLVEAISE 327
>TAIR|locus:2122388 [details] [associations]
symbol:MLH1 "AT4G09140" species:3702 "Arabidopsis
thaliana" [GO:0000795 "synaptonemal complex" evidence=IBA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0005712 "chiasma" evidence=IBA] [GO:0006200
"ATP catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=ISS;IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=RCA;IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0030983 "mismatched DNA binding" evidence=IEA;IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032390 "MutLbeta complex"
evidence=IBA] [GO:0030674 "protein binding, bridging" evidence=ISS]
[GO:0006312 "mitotic recombination" evidence=RCA;IMP] [GO:0009555
"pollen development" evidence=RCA;IMP] [GO:0009845 "seed
germination" evidence=RCA;IMP] [GO:0010154 "fruit development"
evidence=IMP] [GO:0048316 "seed development" evidence=IMP]
[GO:0000790 "nuclear chromatin" evidence=IDA] [GO:0000278 "mitotic
cell cycle" evidence=RCA] [GO:0000724 "double-strand break repair
via homologous recombination" evidence=RCA] [GO:0006261
"DNA-dependent DNA replication" evidence=RCA] [GO:0006275
"regulation of DNA replication" evidence=RCA] [GO:0006302
"double-strand break repair" evidence=RCA] [GO:0006306 "DNA
methylation" evidence=RCA] [GO:0007062 "sister chromatid cohesion"
evidence=RCA] [GO:0007129 "synapsis" evidence=RCA] [GO:0009560
"embryo sac egg cell differentiation" evidence=RCA] [GO:0009737
"response to abscisic acid stimulus" evidence=RCA] [GO:0009793
"embryo development ending in seed dormancy" evidence=RCA]
[GO:0010162 "seed dormancy process" evidence=RCA] [GO:0010564
"regulation of cell cycle process" evidence=RCA] [GO:0016444
"somatic cell DNA recombination" evidence=RCA] [GO:0016568
"chromatin modification" evidence=RCA] [GO:0031047 "gene silencing
by RNA" evidence=RCA] [GO:0042138 "meiotic DNA double-strand break
formation" evidence=RCA] [GO:0045132 "meiotic chromosome
segregation" evidence=RCA] [GO:0048366 "leaf development"
evidence=RCA] [GO:0048825 "cotyledon development" evidence=RCA]
[GO:0051726 "regulation of cell cycle" evidence=RCA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR011186
InterPro:IPR013507 InterPro:IPR014763 Pfam:PF01119 Pfam:PF02518
SMART:SM00387 Prosite:PS00058 GO:GO:0005524 EMBL:CP002687
GO:GO:0009555 GO:GO:0016887 GO:GO:0048316 GO:GO:0009845
GO:GO:0006298 GO:GO:0000790 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0006312 EMBL:AL161514
GO:GO:0007131 GO:GO:0000795 KO:K08734 OMA:SIQVVVK GO:GO:0005712
GO:GO:0032389 GO:GO:0032390 InterPro:IPR014762 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585 HOGENOM:HOG000176000
HSSP:P54278 ProtClustDB:CLSN2690816 EMBL:AJ012747 IPI:IPI00541714
PIR:F85092 PIR:T51620 RefSeq:NP_567345.2 UniGene:At.671
ProteinModelPortal:Q9ZRV4 SMR:Q9ZRV4 IntAct:Q9ZRV4 STRING:Q9ZRV4
PRIDE:Q9ZRV4 EnsemblPlants:AT4G09140.1 GeneID:826493
KEGG:ath:AT4G09140 TAIR:At4g09140 InParanoid:Q9ZRV4
PhylomeDB:Q9ZRV4 Genevestigator:Q9ZRV4 Uniprot:Q9ZRV4
Length = 737
Score = 155 (59.6 bits), Expect = 7.4e-14, Sum P(3) = 7.4e-14
Identities = 36/83 (43%), Positives = 53/83 (63%)
Query: 6 PTNSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQV 65
P P I+ + + VV+RI AG+VI+ SAVKELVENSLDA ++SI + +K+ G + QV
Sbjct: 23 PREPPKIQRLEESVVNRIAAGEVIQRPVSAVKELVENSLDADSSSISVVVKDGGLKLIQV 82
Query: 66 VDNGCGISPNNFKVRAVFLCQAY 88
D+G GI + + LC+ +
Sbjct: 83 SDDGHGIRREDLPI----LCERH 101
Score = 118 (46.6 bits), Expect = 7.4e-14, Sum P(3) = 7.4e-14
Identities = 43/186 (23%), Positives = 85/186 (45%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
+ V L A+ V F C VK+ V S L D+I +V+G+++ L V
Sbjct: 196 KIVDLLSRMAIHYNNVSFSCRKHGA--VKADVHSVVSPSRL-DSIRSVYGVSVAKNLMKV 252
Query: 140 AI--CKSDSCK--VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANS 195
+ C S C +EGF+S + + + F+NDR V+ + + + +Y
Sbjct: 253 EVSSCDSSGCTFDMEGFISNSNYVAKKTI---LVLFINDRLVECSALKRAIEIVYAATLP 309
Query: 196 R-QYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQ-EIYSPNNA-SYSV 252
+ P M+ +P D+N+ P K++V ++ I+ ++ ++ ++ + N+ ++
Sbjct: 310 KASKPFVYMSINLPREHVDINIHPTKKEVSLLNQEIIIEMIQSEVEVKLRNANDTRTFQE 369
Query: 253 NKVEQL 258
KVE +
Sbjct: 370 QKVEYI 375
Score = 39 (18.8 bits), Expect = 7.4e-14, Sum P(3) = 7.4e-14
Identities = 15/56 (26%), Positives = 28/56 (50%)
Query: 648 YNFERLSQSTVLNQQPLLRPLKLDLTPE-------EEVVASMHMDIIRKNGFSLEE 696
+N +LS L++ LL + DL P +E +A M+ +++++ LEE
Sbjct: 522 FNAIQLSDPAPLSELILLALKEEDLDPGNDTKDDLKERIAEMNTELLKEKAEMLEE 577
>UNIPROTKB|B7ZAA0 [details] [associations]
symbol:PMS1 "cDNA, FLJ79114, highly similar to PMS1 protein
homolog 1" species:9606 "Homo sapiens" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030983 "mismatched DNA binding" evidence=IEA]
[GO:0006298 "mismatch repair" evidence=IEA] InterPro:IPR009071
InterPro:IPR002099 InterPro:IPR013507 Pfam:PF01119 Pfam:PF00505
GO:GO:0005524 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0006298 EMBL:AC013468 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 PANTHER:PTHR10073 EMBL:AC008122 UniGene:Hs.111749
HGNC:HGNC:9121 HOVERGEN:HBG031886 ChiTaRS:PMS1 EMBL:AK316215
IPI:IPI00917781 SMR:B7ZAA0 STRING:B7ZAA0 Ensembl:ENST00000418224
Ensembl:ENST00000432292 Uniprot:B7ZAA0
Length = 756
Score = 165 (63.1 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 82/343 (23%), Positives = 141/343 (41%)
Query: 108 KSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDS-CKVEGFLSK-PGQGSGRNLG 165
K+V+ + S K +++V G + N +E +S + GFL K S +L
Sbjct: 18 KAVIWQKSRVSDHKMALMSVLGTAVMNNMESFQYHSEESQIYLSGFLPKCDADHSFTSLS 77
Query: 166 --DRQYFFVNDRPVDLPKVSKLVNELYK----GANSRQYPIAIMNFIVPTRACDVNVTPD 219
+R + F+N RPV + KL+ Y ++R YP+ + VPT DVN+TPD
Sbjct: 78 TPERSFIFINSRPVHQKDILKLIRHHYNLKCLKESTRLYPVFFLKIDVPTADVDVNLTPD 137
Query: 220 KRKVFFSDECSILHALREGLQEIYSP--NNASYSVNKVEQLIEPEKSGPSSGAESCMFLE 277
K +V ++ S+L AL + Y P + SY NK + + S AE+ +
Sbjct: 138 KSQVLLQNKESVLIALENLMTTCYGPLPSTNSYENNKTD--VSAADIVLSKTAETDVLFN 195
Query: 278 QLSPDGNGCIEILNEQQISKGNTPKTVEVDTLHSDALEGLVHSSNENGKGNFTLKAHD-D 336
++ G + + I N E D L + S + G G+ + + + D
Sbjct: 196 KVESSGKNYSNV-DTSVIPFQNDMHNDESGKNTDDCLNHQI-SIGDFGYGHCSSEISNID 253
Query: 337 KSADRLSKFNCMKLIGPHNVPTE--ENC--PSPSRVMAKN-----ITEDGESDSRSRCIQ 387
K+ + M + N TE + C S ++N I E GE++ +
Sbjct: 254 KNTKNAFQDISMSNVSWENSQTEYSKTCFISSVKHTQSENGNKDHIDESGENEEEAGLEN 313
Query: 388 SSLNKFVTVSKRKY--ESIARPLTEMPLL-RNQSLHCQMKKSN 427
SS S+ S+ + + +L +SL C++ +N
Sbjct: 314 SSEISADEWSRGNILKNSVGENIEPVKILVPEKSLPCKVSNNN 356
Score = 100 (40.3 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 44/188 (23%), Positives = 81/188 (43%)
Query: 635 DLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEE-----EVVASMHMDIIRK 689
++ +++ + +E F+RL ++ L +PL +P+ L + +V+ M D R
Sbjct: 567 EVMLLNPYRVEEALLFKRLLENHKLPAEPLEKPIMLTESLFNGSHYLDVLYKMTADDQRY 626
Query: 690 NGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTL-----ADNQGECSIISSY 744
+G + DP A F++K +P IT +++ + + L AD + + I +
Sbjct: 627 SGSTYLSDPRLTAN-GFKIKLIP-GVSITENYLEIEGMANCLPFYGVADLKEILNAILNR 684
Query: 745 KMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADL--NSPWNCPHGRP 802
P +V + L A R S + L + ++Q I+ + N C HGRP
Sbjct: 685 NAKEVYECRPRKVISYLEGEAVRLSRQLPMYLSKEDIQDIIYRMKHQFGNEIKECVHGRP 744
Query: 803 TMRHLVDL 810
HL L
Sbjct: 745 FFHHLTYL 752
>UNIPROTKB|Q7NL47 [details] [associations]
symbol:mutL "DNA mismatch repair protein MutL"
species:251221 "Gloeobacter violaceus PCC 7421" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] HAMAP:MF_00149
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 InterPro:IPR020667
Pfam:PF01119 Pfam:PF02518 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:BA000045 GenomeReviews:BA000045_GR HSSP:P23367
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
GO:GO:0032300 KO:K03572 ProtClustDB:PRK00095 RefSeq:NP_924225.1
ProteinModelPortal:Q7NL47 GeneID:2598842 KEGG:gvi:gvip188
PATRIC:22041969 OMA:NTHKAIN BioCyc:GVIO251221:GH9A-1330-MONOMER
Uniprot:Q7NL47
Length = 573
Score = 130 (50.8 bits), Expect = 1.2e-13, Sum P(3) = 1.2e-13
Identities = 32/78 (41%), Positives = 44/78 (56%)
Query: 7 TNSP--TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEW-F 63
+NSP IRP+ V + AG+VI ++ V+ELV+NSLDAGA I ++ + E W
Sbjct: 39 SNSPLGAIRPLADQTVRLLAAGEVIDSPAAVVRELVDNSLDAGADRIRVSF--WPESWRV 96
Query: 64 QVVDNGCGISPNNFKVRA 81
QV DNG G + A
Sbjct: 97 QVQDNGLGFEAEELPMAA 114
Score = 105 (42.0 bits), Expect = 1.2e-13, Sum P(3) = 1.2e-13
Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 746 MDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMR 805
M+ AD +++RA L+ CR++I G AL +MQ++L+ +P CPHGRP
Sbjct: 497 MELADQEDAAQMRAALS---CRTAIRNGTALSPLQMQQLLDRWQRTRNPHTCPHGRPIYM 553
Query: 806 HLVD 809
L D
Sbjct: 554 PLTD 557
Score = 72 (30.4 bits), Expect = 1.2e-13, Sum P(3) = 1.2e-13
Identities = 22/90 (24%), Positives = 42/90 (46%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEE 676
+K + Q + +I+ + + +V+QH A E+ FE L + PL PL L+L+ +
Sbjct: 401 LKALAQLHQTYILAEYPGGVCLVEQHVAHERVLFEALESDWQV--VPLEPPLALELSSRQ 458
Query: 677 EVVASMH---MDIIRKNGFSLEEDPHALAG 703
+ H ++ + + + P AL G
Sbjct: 459 AQNLTEHGIEVEAFGERSWLVRSAPVALVG 488
Score = 69 (29.3 bits), Expect = 2.6e-07, Sum P(3) = 2.6e-07
Identities = 59/241 (24%), Positives = 100/241 (41%)
Query: 38 ELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFKVRAVF-LCQAYALIAKGVR 96
ELVE+ A A + + E E Q V ++ +VRAV L YAL G
Sbjct: 172 ELVESQPAAAAPGTVVTVSELFE--LQPVRRRF-LADTKAQVRAVTQLVHRYALAYPGHL 228
Query: 97 FVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKP 156
F G+ + L+ + LK + + + L V + + D +V + P
Sbjct: 229 FELA-VDGR----LQLQLWAAPGLKQRALQLLNSYDEHDLREVHL-ERDGRRVRLAIGLP 282
Query: 157 GQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGA--NSRQYPIAIMNFIVPTRACDV 214
+ S R D ++N R V ++ + V ++ RQ P+ I+ I+P D
Sbjct: 283 DRCS-RARADWLQIYINGRFVRHGELEQAVRAGFERTLRPGRQ-PVCIVQLILPADEVDW 340
Query: 215 NVTPDKRKVFFSDE---CS-ILHALREGLQEIYSPNNASYSVNKVEQLIEPEKSGPSSGA 270
N P K +V + C ++ A+ EGL+ ++P A+ + E + P + S+G
Sbjct: 341 NRHPAKLEVQLAGTAPACELVVAAIGEGLRH-FAPKPAAALLRLAEAHL-PY-AAESTGG 397
Query: 271 E 271
E
Sbjct: 398 E 398
>UNIPROTKB|A8HM54 [details] [associations]
symbol:MLH1 "Mismatch repair protein" species:3055
"Chlamydomonas reinhardtii" [GO:0000795 "synaptonemal complex"
evidence=IBA] [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0005712 "chiasma" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032390 "MutLbeta complex"
evidence=IBA] [GO:0032407 "MutSalpha complex binding" evidence=IBA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR011186
InterPro:IPR013507 InterPro:IPR014763 Pfam:PF01119 SMART:SM00387
Prosite:PS00058 GO:GO:0005524 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407 EMBL:DS496108
GO:GO:0000795 eggNOG:COG0323 KO:K08734 GO:GO:0005712 GO:GO:0032389
GO:GO:0032390 InterPro:IPR014762 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585 RefSeq:XP_001690102.1
ProteinModelPortal:A8HM54 STRING:A8HM54 EnsemblPlants:EDP09840
GeneID:5715471 KEGG:cre:CHLREDRAFT_146633 OMA:NDEENNT
ProtClustDB:CLSN2920798 Uniprot:A8HM54
Length = 1007
Score = 164 (62.8 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 31/74 (41%), Positives = 50/74 (67%)
Query: 6 PTNSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQV 65
P IR +++ VV++I AG+VI+ +SA+KE++ENSLDAG+T I + +K+ G + Q+
Sbjct: 33 PATPAIIRKLDENVVNKIAAGEVIQRPASALKEMLENSLDAGSTQISVTVKDGGNKLLQI 92
Query: 66 VDNGCGISPNNFKV 79
DNG GI + +
Sbjct: 93 TDNGSGIRKEDLAI 106
Score = 104 (41.7 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 50/214 (23%), Positives = 90/214 (42%)
Query: 88 YALI-AKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDS 146
YA+ A GV F C G + T + S D + V+G ++ L P+A+
Sbjct: 215 YAVYSAPGVGFSCRRH-GDGRPDI--STTAAGSRLDAVRAVYGADVARELLPLALAAGGG 271
Query: 147 C----KVEGFLSKPGQG--SGRNLGDRQ----YFFVNDRPVDLPKVSKLVNELYKGANSR 196
VEG L +G SG N G + F+N R V+ + + + +Y +
Sbjct: 272 TGPEVPVEGPLGIKLEGLISGANYGSGKKTVLVLFINGRCVECAPLRRALEGVYAALLPK 331
Query: 197 -QYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQ-EIYSPNNA-SYSVN 253
P ++ +P R +VN+ P KR+V F + ++ +R ++ ++ + N++ +++
Sbjct: 332 ASKPWLFLDLRLPPRQVEVNMHPTKREVGFMHQAEVIEVIRGAVEAKLLASNDSRTFATG 391
Query: 254 KVE--QLIEPEKSGPSSGAESCMFLEQLSPDGNG 285
Q + P S P E + QL G
Sbjct: 392 ATATLQTVLPFASLPPPAHEQ-LLQSQLQGGSQG 424
>UNIPROTKB|E9PC65 [details] [associations]
symbol:PMS1 "PMS1 protein homolog 1" species:9606 "Homo
sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006298
"mismatch repair" evidence=IEA] [GO:0030983 "mismatched DNA
binding" evidence=IEA] InterPro:IPR009071 InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR013507 Pfam:PF01119 Pfam:PF00505
GO:GO:0005524 Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095
PROSITE:PS50118 GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874
EMBL:AC013468 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 PANTHER:PTHR10073 EMBL:AC008122
HGNC:HGNC:9121 ChiTaRS:PMS1 IPI:IPI00873522
ProteinModelPortal:E9PC65 SMR:E9PC65 Ensembl:ENST00000424307
UCSC:uc010zgb.1 ArrayExpress:E9PC65 Bgee:E9PC65 Uniprot:E9PC65
Length = 711
Score = 165 (63.1 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 82/343 (23%), Positives = 141/343 (41%)
Query: 108 KSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDS-CKVEGFLSK-PGQGSGRNLG 165
K+V+ + S K +++V G + N +E +S + GFL K S +L
Sbjct: 133 KAVIWQKSRVSDHKMALMSVLGTAVMNNMESFQYHSEESQIYLSGFLPKCDADHSFTSLS 192
Query: 166 --DRQYFFVNDRPVDLPKVSKLVNELYK----GANSRQYPIAIMNFIVPTRACDVNVTPD 219
+R + F+N RPV + KL+ Y ++R YP+ + VPT DVN+TPD
Sbjct: 193 TPERSFIFINSRPVHQKDILKLIRHHYNLKCLKESTRLYPVFFLKIDVPTADVDVNLTPD 252
Query: 220 KRKVFFSDECSILHALREGLQEIYSP--NNASYSVNKVEQLIEPEKSGPSSGAESCMFLE 277
K +V ++ S+L AL + Y P + SY NK + + S AE+ +
Sbjct: 253 KSQVLLQNKESVLIALENLMTTCYGPLPSTNSYENNKTD--VSAADIVLSKTAETDVLFN 310
Query: 278 QLSPDGNGCIEILNEQQISKGNTPKTVEVDTLHSDALEGLVHSSNENGKGNFTLKAHD-D 336
++ G + + I N E D L + S + G G+ + + + D
Sbjct: 311 KVESSGKNYSNV-DTSVIPFQNDMHNDESGKNTDDCLNHQI-SIGDFGYGHCSSEISNID 368
Query: 337 KSADRLSKFNCMKLIGPHNVPTE--ENC--PSPSRVMAKN-----ITEDGESDSRSRCIQ 387
K+ + M + N TE + C S ++N I E GE++ +
Sbjct: 369 KNTKNAFQDISMSNVSWENSQTEYSKTCFISSVKHTQSENGNKDHIDESGENEEEAGLEN 428
Query: 388 SSLNKFVTVSKRKY--ESIARPLTEMPLL-RNQSLHCQMKKSN 427
SS S+ S+ + + +L +SL C++ +N
Sbjct: 429 SSEISADEWSRGNILKNSVGENIEPVKILVPEKSLPCKVSNNN 471
Score = 99 (39.9 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 19/44 (43%), Positives = 30/44 (68%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIAL 55
++ + V + + Q+I + S VKEL+ENSLDAGATS+++ L
Sbjct: 1 MKQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSVDVKL 44
>UNIPROTKB|P40692 [details] [associations]
symbol:MLH1 "DNA mismatch repair protein Mlh1" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0000239
"pachytene" evidence=IEA] [GO:0000289 "nuclear-transcribed mRNA
poly(A) tail shortening" evidence=IEA] [GO:0000712 "resolution of
meiotic recombination intermediates" evidence=IEA] [GO:0001673
"male germ cell nucleus" evidence=IEA] [GO:0006303 "double-strand
break repair via nonhomologous end joining" evidence=IEA]
[GO:0007060 "male meiosis chromosome segregation" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0008630 "intrinsic
apoptotic signaling pathway in response to DNA damage"
evidence=IEA] [GO:0032137 "guanine/thymine mispair binding"
evidence=IEA] [GO:0043060 "meiotic metaphase I plate congression"
evidence=IEA] [GO:0045190 "isotype switching" evidence=IEA]
[GO:0045950 "negative regulation of mitotic recombination"
evidence=IEA] [GO:0048477 "oogenesis" evidence=IEA] [GO:0051257
"spindle midzone assembly involved in meiosis" evidence=IEA]
[GO:0000795 "synaptonemal complex" evidence=IBA] [GO:0005712
"chiasma" evidence=IBA] [GO:0006298 "mismatch repair" evidence=IBA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IBA]
[GO:0016446 "somatic hypermutation of immunoglobulin genes"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032390 "MutLbeta complex"
evidence=IBA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IC] [GO:0032407 "MutSalpha complex
binding" evidence=IDA] [GO:0003697 "single-stranded DNA binding"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IBA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR011186
InterPro:IPR013507 InterPro:IPR014763 Pfam:PF01119 SMART:SM00387
Prosite:PS00058 GO:GO:0005524 GO:GO:0008630 GO:GO:0042493
EMBL:CH471055 GO:GO:0009636 GO:GO:0001666 GO:GO:0048477
GO:GO:0007283 GO:GO:0016887 GO:GO:0006298 Reactome:REACT_111183
GO:GO:0001673 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0045190
GO:GO:0071407 MIM:276300 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0006303
GO:GO:0045950 Orphanet:144 MIM:608089 GO:GO:0000289 GO:GO:0000239
GO:GO:0000712 GO:GO:0000795 GO:GO:0016446 eggNOG:COG0323
EMBL:AC006583 KO:K08734 OMA:SIQVVVK GO:GO:0005712 GO:GO:0032389
GO:GO:0032390 InterPro:IPR014762 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585 EMBL:U07343 EMBL:U07418
EMBL:U40978 EMBL:U40960 EMBL:U40961 EMBL:U40962 EMBL:U40963
EMBL:U40964 EMBL:U40965 EMBL:U40966 EMBL:U40967 EMBL:U40968
EMBL:U40969 EMBL:U40970 EMBL:U40971 EMBL:U40972 EMBL:U40973
EMBL:U40974 EMBL:U40975 EMBL:U40976 EMBL:U40977 EMBL:U17857
EMBL:U17839 EMBL:U17840 EMBL:U17841 EMBL:U17842 EMBL:U17843
EMBL:U17844 EMBL:U17845 EMBL:U17846 EMBL:U17847 EMBL:U17848
EMBL:U17849 EMBL:U17851 EMBL:U17852 EMBL:U17853 EMBL:U17854
EMBL:U17855 EMBL:U17856 EMBL:AY217549 EMBL:AK295359 EMBL:AK298324
EMBL:AK316074 EMBL:AK316264 EMBL:AC011816 EMBL:BC006850
IPI:IPI00029754 IPI:IPI00742734 PIR:S43085 RefSeq:NP_000240.1
RefSeq:NP_001161089.1 RefSeq:NP_001161090.1 RefSeq:NP_001161091.1
RefSeq:NP_001245200.1 RefSeq:NP_001245202.1 RefSeq:NP_001245203.1
UniGene:Hs.195364 PDB:3NA3 PDB:3RBN PDBsum:3NA3 PDBsum:3RBN
ProteinModelPortal:P40692 SMR:P40692 DIP:DIP-27601N IntAct:P40692
MINT:MINT-257265 STRING:P40692 PhosphoSite:P40692 DMDM:730028
PaxDb:P40692 PRIDE:P40692 DNASU:4292 Ensembl:ENST00000231790
Ensembl:ENST00000455445 Ensembl:ENST00000458205
Ensembl:ENST00000539477 GeneID:4292 KEGG:hsa:4292 UCSC:uc003cgl.3
CTD:4292 GeneCards:GC03P037034 HGNC:HGNC:7127 HPA:CAB013294
MIM:120436 MIM:158320 MIM:609310 neXtProt:NX_P40692 Orphanet:587
PharmGKB:PA240 HOGENOM:HOG000176000 HOVERGEN:HBG006374
InParanoid:P40692 OrthoDB:EOG43N7C7 PhylomeDB:P40692 ChiTaRS:Mlh1
EvolutionaryTrace:P40692 GenomeRNAi:4292 NextBio:16893
PMAP-CutDB:P40692 ArrayExpress:P40692 Bgee:P40692 CleanEx:HS_MLH1
Genevestigator:P40692 GermOnline:ENSG00000076242 GO:GO:0032137
GO:GO:0007060 GO:GO:0043060 GO:GO:0051257 Uniprot:P40692
Length = 756
Score = 151 (58.2 bits), Expect = 1.4e-13, Sum P(3) = 1.4e-13
Identities = 30/68 (44%), Positives = 49/68 (72%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR +++ VV+RI AG+VI+ ++A+KE++EN LDA +TSI++ +KE G + Q+ DNG G
Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVIVKEGGLKLIQIQDNGTG 67
Query: 72 ISPNNFKV 79
I + +
Sbjct: 68 IRKEDLDI 75
Score = 119 (46.9 bits), Expect = 1.4e-13, Sum P(3) = 1.4e-13
Identities = 49/201 (24%), Positives = 90/201 (44%)
Query: 88 YALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAIC--KSD 145
Y++ G+ F G+ V V +T ++S DNI ++FG + L + C K+
Sbjct: 183 YSVHNAGISF-SVKKQGETVADV--RTLPNASTVDNIRSIFGNAVSRELIEIG-CEDKTL 238
Query: 146 SCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQ-YPIAIMN 204
+ K+ G++S + + F+N R V+ + K + +Y + +P ++
Sbjct: 239 AFKMNGYISNANYSVKKCIF---LLFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLS 295
Query: 205 FIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASYSVNKVEQLIEPEKS 264
+ + DVNV P K +V F E SIL +++ ++ +N+S Q + P +
Sbjct: 296 LEISPQNVDVNVHPTKHEVHFLHEESILERVQQHIESKLLGSNSSRMY--FTQTLLPGLA 353
Query: 265 GPSSG-AESCMFLEQLSPDGN 284
GPS +S L S G+
Sbjct: 354 GPSGEMVKSTTSLTSSSTSGS 374
Score = 40 (19.1 bits), Expect = 1.4e-13, Sum P(3) = 1.4e-13
Identities = 7/17 (41%), Positives = 13/17 (76%)
Query: 363 PSPSRVMAKNITEDGES 379
P+P+ V AKN + +G++
Sbjct: 435 PAPAEVAAKNQSLEGDT 451
Score = 37 (18.1 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 14/60 (23%), Positives = 27/60 (45%)
Query: 188 ELYKGANSRQYPIAIMNFIVPTRACDV-------NVTPDKRKVFF---SDECSILHALRE 237
E+ + N P+ I N++ P + V D+ K F S EC++ +++R+
Sbjct: 629 EIDEEGNLIGLPLLIDNYVPPLEGLPIFILRLATEVNWDEEKECFESLSKECAMFYSIRK 688
>RGD|620937 [details] [associations]
symbol:Mlh1 "mutL homolog 1, colon cancer, nonpolyposis type 2
(E. coli)" species:10116 "Rattus norvegicus" [GO:0000239
"pachytene" evidence=IEA;ISO] [GO:0000289 "nuclear-transcribed mRNA
poly(A) tail shortening" evidence=IEA;ISO] [GO:0000712 "resolution
of meiotic recombination intermediates" evidence=IEA;ISO]
[GO:0000793 "condensed chromosome" evidence=ISO] [GO:0000794
"condensed nuclear chromosome" evidence=ISO] [GO:0000795
"synaptonemal complex" evidence=IEA;ISO;IDA] [GO:0001666 "response
to hypoxia" evidence=IEP] [GO:0001673 "male germ cell nucleus"
evidence=IEA;ISO] [GO:0002204 "somatic recombination of
immunoglobulin genes involved in immune response" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003697
"single-stranded DNA binding" evidence=IEA;ISO;IBA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005694 "chromosome" evidence=ISO] [GO:0005712 "chiasma"
evidence=IEA;ISO;IBA] [GO:0006200 "ATP catabolic process"
evidence=IBA] [GO:0006281 "DNA repair" evidence=ISO] [GO:0006298
"mismatch repair" evidence=IEA;ISO;IBA] [GO:0006303 "double-strand
break repair via nonhomologous end joining" evidence=IEA;ISO]
[GO:0006974 "response to DNA damage stimulus" evidence=ISO]
[GO:0007060 "male meiosis chromosome segregation" evidence=IEA;ISO]
[GO:0007126 "meiosis" evidence=ISO] [GO:0007131 "reciprocal meiotic
recombination" evidence=ISO;IBA] [GO:0007140 "male meiosis"
evidence=ISO] [GO:0007283 "spermatogenesis" evidence=IEA;IEP;ISO]
[GO:0008630 "intrinsic apoptotic signaling pathway in response to
DNA damage" evidence=IEA;ISO] [GO:0009636 "response to toxic
substance" evidence=IEP] [GO:0016446 "somatic hypermutation of
immunoglobulin genes" evidence=IEA;ISO;IBA] [GO:0016447 "somatic
recombination of immunoglobulin gene segments" evidence=ISO]
[GO:0016887 "ATPase activity" evidence=IBA] [GO:0030983 "mismatched
DNA binding" evidence=IEA] [GO:0032137 "guanine/thymine mispair
binding" evidence=IEA;ISO] [GO:0032300 "mismatch repair complex"
evidence=IBA] [GO:0032389 "MutLalpha complex" evidence=IEA;ISO;IBA]
[GO:0032390 "MutLbeta complex" evidence=IBA] [GO:0032407 "MutSalpha
complex binding" evidence=IEA;ISO;IBA] [GO:0042493 "response to
drug" evidence=IEP] [GO:0043060 "meiotic metaphase I plate
congression" evidence=IEA;ISO] [GO:0043566 "structure-specific DNA
binding" evidence=ISO] [GO:0045132 "meiotic chromosome segregation"
evidence=ISO] [GO:0045190 "isotype switching" evidence=IEA;ISO]
[GO:0045950 "negative regulation of mitotic recombination"
evidence=IEA;ISO] [GO:0048477 "oogenesis" evidence=IEA;ISO]
[GO:0051257 "spindle midzone assembly involved in meiosis"
evidence=IEA;ISO] [GO:0071407 "cellular response to organic cyclic
compound" evidence=IEP] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR011186 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 EMBL:U80054 Prosite:PS00058 RGD:620937
GO:GO:0005524 GO:GO:0042493 GO:GO:0009636 GO:GO:0001666
GO:GO:0007283 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0071407 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407 GO:GO:0000795
GO:GO:0016446 eggNOG:COG0323 KO:K08734 GO:GO:0005712 GO:GO:0032389
GO:GO:0032390 InterPro:IPR014762 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585 CTD:4292
HOGENOM:HOG000176000 HOVERGEN:HBG006374 IPI:IPI00947906
RefSeq:NP_112315.1 UniGene:Rn.20391 ProteinModelPortal:P97679
STRING:P97679 PRIDE:P97679 GeneID:81685 KEGG:rno:81685
UCSC:RGD:620937 InParanoid:P97679 NextBio:615316
ArrayExpress:P97679 Genevestigator:P97679
GermOnline:ENSRNOG00000033809 Uniprot:P97679
Length = 757
Score = 142 (55.0 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 28/68 (41%), Positives = 48/68 (70%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR +++ VV+RI AG+VI+ ++A+KE+ EN LDA +T+I++ ++E G + Q+ DNG G
Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMTENCLDAKSTNIQVIVREGGLKLIQIQDNGTG 67
Query: 72 ISPNNFKV 79
I + +
Sbjct: 68 IRKEDLDI 75
Score = 123 (48.4 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 50/202 (24%), Positives = 91/202 (45%)
Query: 88 YALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAIC--KSD 145
Y++ G+ F G+ V V +T +++ DNI ++FG + L V C K+
Sbjct: 183 YSIHNSGISF-SVKKQGETVSDV--RTLPNATTVDNIRSIFGNAVSRELIEVG-CEDKTL 238
Query: 146 SCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQ-YPIAIMN 204
+ K+ G++S + + F+N R V+ + K + +Y + +P +
Sbjct: 239 AFKMNGYISNANYSVKKCIF---LLFINHRLVESAALKKAIEAVYAAYLPKNTHPFLYLI 295
Query: 205 FIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASYSVNKVEQLIEPEKS 264
+ + DVNV P K +V F E SIL +++ ++ +N+S Q + P +
Sbjct: 296 LEISPQNVDVNVHPTKHEVHFLHEESILERVQQHIESKLLGSNSSRMY--FTQTLLPGLA 353
Query: 265 GPSSGA-ESCMFLEQLSPDGNG 285
GPS A +S + S G+G
Sbjct: 354 GPSGEAVKSTTGIASSSTSGSG 375
>UNIPROTKB|P97679 [details] [associations]
symbol:Mlh1 "DNA mismatch repair protein Mlh1"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR011186 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 EMBL:U80054 Prosite:PS00058 RGD:620937
GO:GO:0005524 GO:GO:0042493 GO:GO:0009636 GO:GO:0001666
GO:GO:0007283 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0071407 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407 GO:GO:0000795
GO:GO:0016446 eggNOG:COG0323 KO:K08734 GO:GO:0005712 GO:GO:0032389
GO:GO:0032390 InterPro:IPR014762 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585 CTD:4292
HOGENOM:HOG000176000 HOVERGEN:HBG006374 IPI:IPI00947906
RefSeq:NP_112315.1 UniGene:Rn.20391 ProteinModelPortal:P97679
STRING:P97679 PRIDE:P97679 GeneID:81685 KEGG:rno:81685
UCSC:RGD:620937 InParanoid:P97679 NextBio:615316
ArrayExpress:P97679 Genevestigator:P97679
GermOnline:ENSRNOG00000033809 Uniprot:P97679
Length = 757
Score = 142 (55.0 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 28/68 (41%), Positives = 48/68 (70%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR +++ VV+RI AG+VI+ ++A+KE+ EN LDA +T+I++ ++E G + Q+ DNG G
Sbjct: 8 IRRLDETVVNRIAAGEVIQRPANAIKEMTENCLDAKSTNIQVIVREGGLKLIQIQDNGTG 67
Query: 72 ISPNNFKV 79
I + +
Sbjct: 68 IRKEDLDI 75
Score = 123 (48.4 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 50/202 (24%), Positives = 91/202 (45%)
Query: 88 YALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAIC--KSD 145
Y++ G+ F G+ V V +T +++ DNI ++FG + L V C K+
Sbjct: 183 YSIHNSGISF-SVKKQGETVSDV--RTLPNATTVDNIRSIFGNAVSRELIEVG-CEDKTL 238
Query: 146 SCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQ-YPIAIMN 204
+ K+ G++S + + F+N R V+ + K + +Y + +P +
Sbjct: 239 AFKMNGYISNANYSVKKCIF---LLFINHRLVESAALKKAIEAVYAAYLPKNTHPFLYLI 295
Query: 205 FIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASYSVNKVEQLIEPEKS 264
+ + DVNV P K +V F E SIL +++ ++ +N+S Q + P +
Sbjct: 296 LEISPQNVDVNVHPTKHEVHFLHEESILERVQQHIESKLLGSNSSRMY--FTQTLLPGLA 353
Query: 265 GPSSGA-ESCMFLEQLSPDGNG 285
GPS A +S + S G+G
Sbjct: 354 GPSGEAVKSTTGIASSSTSGSG 375
>UNIPROTKB|A4D2B8 [details] [associations]
symbol:PMS2P1 "Putative postmeiotic segregation increased
2-like protein 1" species:9606 "Homo sapiens" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IBA] [GO:0006298
"mismatch repair" evidence=IBA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IBA] [GO:0016446 "somatic hypermutation of
immunoglobulin genes" evidence=IBA] [GO:0016887 "ATPase activity"
evidence=IBA] [GO:0032300 "mismatch repair complex" evidence=IBA]
[GO:0032389 "MutLalpha complex" evidence=IBA] [GO:0032407
"MutSalpha complex binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] InterPro:IPR002099
InterPro:IPR003594 Prosite:PS00058 GO:GO:0005524 GO:GO:0016887
GO:GO:0016301 GO:GO:0006298 EMBL:CH236956 EMBL:CH471091
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 PROSITE:PS50109
GO:GO:0030983 GO:GO:0007131 GO:GO:0032407 GO:GO:0016446
eggNOG:COG0323 GO:GO:0032389 InterPro:IPR014762 PANTHER:PTHR10073
EMBL:U38964 EMBL:AB017004 EMBL:BC067809 EMBL:BC110395 EMBL:D38435
EMBL:D38499 IPI:IPI00477733 IPI:IPI00871484 IPI:IPI00953669
PIR:JC2398 PIR:JC2399 UniGene:Hs.634244 UniGene:Hs.661055
ProteinModelPortal:A4D2B8 SMR:A4D2B8 STRING:A4D2B8
PhosphoSite:A4D2B8 DMDM:74706301 PaxDb:A4D2B8 PRIDE:A4D2B8
GeneCards:GC07M099899 HGNC:HGNC:9123 MIM:605038 neXtProt:NX_A4D2B8
HOVERGEN:HBG108273 InParanoid:Q13400 ChiTaRS:PMS2P1
Genevestigator:A4D2B8 Uniprot:A4D2B8
Length = 440
Score = 210 (79.0 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 40/77 (51%), Positives = 57/77 (74%)
Query: 4 ETPTNSPT--IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEE 61
E+ + P I+PI++ VH+IC+G V+ LS+AVKELVENSLDAGAT+I++ LK+YG +
Sbjct: 205 ESSSTEPAKAIKPIDRKSVHQICSGPVVPSLSTAVKELVENSLDAGATNIDLKLKDYGVD 264
Query: 62 WFQVVDNGCGISPNNFK 78
+V NGCG+ NF+
Sbjct: 265 LIEVSGNGCGVEEENFE 281
Score = 43 (20.2 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 8/10 (80%), Positives = 10/10 (100%)
Query: 119 SLKDNIITVF 128
SL+DN+ITVF
Sbjct: 420 SLEDNVITVF 429
>UNIPROTKB|H0Y818 [details] [associations]
symbol:MLH1 "DNA mismatch repair protein Mlh1" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0030983 "mismatched DNA binding" evidence=IEA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR011186
InterPro:IPR013507 InterPro:IPR014763 Pfam:PF01119 SMART:SM00387
Prosite:PS00058 GO:GO:0005524 GO:GO:0005634 GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 EMBL:AC006583
InterPro:IPR014762 PANTHER:PTHR10073 PANTHER:PTHR10073:SF11
TIGRFAMs:TIGR00585 EMBL:AC011816 HGNC:HGNC:7127 ChiTaRS:Mlh1
Ensembl:ENST00000456676 Uniprot:H0Y818
Length = 679
Score = 144 (55.7 bits), Expect = 5.1e-13, Sum P(3) = 5.1e-13
Identities = 28/65 (43%), Positives = 47/65 (72%)
Query: 15 INKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISP 74
+++ VV+RI AG+VI+ ++A+KE++EN LDA +TSI++ +KE G + Q+ DNG GI
Sbjct: 3 LDETVVNRIAAGEVIQRPANAIKEMIENCLDAKSTSIQVIVKEGGLKLIQIQDNGTGIRK 62
Query: 75 NNFKV 79
+ +
Sbjct: 63 EDLDI 67
Score = 119 (46.9 bits), Expect = 5.1e-13, Sum P(3) = 5.1e-13
Identities = 49/201 (24%), Positives = 90/201 (44%)
Query: 88 YALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAIC--KSD 145
Y++ G+ F G+ V V +T ++S DNI ++FG + L + C K+
Sbjct: 175 YSVHNAGISF-SVKKQGETVADV--RTLPNASTVDNIRSIFGNAVSRELIEIG-CEDKTL 230
Query: 146 SCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQ-YPIAIMN 204
+ K+ G++S + + F+N R V+ + K + +Y + +P ++
Sbjct: 231 AFKMNGYISNANYSVKKCIF---LLFINHRLVESTSLRKAIETVYAAYLPKNTHPFLYLS 287
Query: 205 FIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASYSVNKVEQLIEPEKS 264
+ + DVNV P K +V F E SIL +++ ++ +N+S Q + P +
Sbjct: 288 LEISPQNVDVNVHPTKHEVHFLHEESILERVQQHIESKLLGSNSSRMY--FTQTLLPGLA 345
Query: 265 GPSSG-AESCMFLEQLSPDGN 284
GPS +S L S G+
Sbjct: 346 GPSGEMVKSTTSLTSSSTSGS 366
Score = 40 (19.1 bits), Expect = 5.1e-13, Sum P(3) = 5.1e-13
Identities = 7/17 (41%), Positives = 13/17 (76%)
Query: 363 PSPSRVMAKNITEDGES 379
P+P+ V AKN + +G++
Sbjct: 427 PAPAEVAAKNQSLEGDT 443
>UNIPROTKB|Q5B515 [details] [associations]
symbol:AN4365.2 "DNA mismatch repair protein (Mlh3),
putative (AFU_orthologue; AFUA_4G06490)" species:227321
"Aspergillus nidulans FGSC A4" [GO:0000795 "synaptonemal complex"
evidence=IBA] [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0005712 "chiasma" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032390
"MutLbeta complex" evidence=IBA] [GO:0032407 "MutSalpha complex
binding" evidence=IBA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR014790 Pfam:PF08676 SMART:SM00387 SMART:SM00853
GO:GO:0005524 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 EMBL:BN001303 GO:GO:0030983
GO:GO:0007131 GO:GO:0032407 GO:GO:0000795 eggNOG:COG0323
GO:GO:0005712 GO:GO:0032390 PANTHER:PTHR10073 KO:K08739
OrthoDB:EOG46X2HJ EMBL:AACD01000075 RefSeq:XP_661969.1
ProteinModelPortal:Q5B515 EnsemblFungi:CADANIAT00006093
GeneID:2872164 KEGG:ani:AN4365.2 HOGENOM:HOG000188023 OMA:HAADERC
Uniprot:Q5B515
Length = 870
Score = 164 (62.8 bits), Expect = 6.0e-13, Sum P(2) = 6.0e-13
Identities = 59/218 (27%), Positives = 102/218 (46%)
Query: 611 KEDFGRMKVIGQFNLGFIIGKL-DQD---LFIVDQHAADEKYNFERLSQSTVLNQQPL-- 664
K D +VIGQ + FI+ ++ D + L ++DQHAADE+ ERL S N +
Sbjct: 622 KCDLQTARVIGQVDQKFILVEIPDANASTLVLIDQHAADERCRIERL-YSGFFNGSEVQT 680
Query: 665 --LRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAG-LRFRLKAVP--FSKKITF 719
+ P+ + + P E + + + G + +G + A+P +++
Sbjct: 681 IEVEPIVIAIPPVETSLFRQQAEFFQSWGIEYMIGHASESGKASISVSALPTLIAERCRA 740
Query: 720 GVEDVKDLISTLADNQGE--CSIISSYKMDTAD------SVCPSRVRAMLASRACRSSIM 771
E + ++ + E ++ D+A+ + CP +R ML SRACR++IM
Sbjct: 741 EPEQLIGILRAEIWKRTEERPQTFNAKGTDSAEDWVRQIAGCPQGIRDMLNSRACRTAIM 800
Query: 772 IGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVD 809
D L +E + ++ LA P+ C HGRP+M LV+
Sbjct: 801 FNDVLSVDECRTLVSRLASCVFPFQCAHGRPSMVPLVE 838
Score = 96 (38.9 bits), Expect = 6.0e-13, Sum P(2) = 6.0e-13
Identities = 25/71 (35%), Positives = 40/71 (56%)
Query: 8 NSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVD 67
N I+P+ + V +I + +I L+ V ELV+N+LDA A I + + +Y V D
Sbjct: 3 NDHPIQPLPQDVAAKIRSSTLITHLNGVVLELVKNALDANAQCIFVTV-DYRRGGCVVED 61
Query: 68 NGCGISPNNFK 78
+G GI+P F+
Sbjct: 62 DGEGIAPAEFE 72
>DICTYBASE|DDB_G0283883 [details] [associations]
symbol:mlh3 "MutL DNA mismatch repair protein"
species:44689 "Dictyostelium discoideum" [GO:0030983 "mismatched
DNA binding" evidence=IEA] [GO:0006298 "mismatch repair"
evidence=IEA;IBA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0032407 "MutSalpha complex binding" evidence=IBA] [GO:0032390
"MutLbeta complex" evidence=IBA] [GO:0032300 "mismatch repair
complex" evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IBA]
[GO:0006200 "ATP catabolic process" evidence=IBA] [GO:0005712
"chiasma" evidence=IBA] [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0000795 "synaptonemal complex" evidence=IBA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 dictyBase:DDB_G0283883 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 EMBL:AAFI02000057 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407 GO:GO:0000795
eggNOG:COG0323 GO:GO:0005712 GO:GO:0032390 PANTHER:PTHR10073
KO:K08739 RefSeq:XP_638891.4 EnsemblProtists:DDB0232420
GeneID:8624288 KEGG:ddi:DDB_G0283883 InParanoid:Q54QI0 OMA:NECNIPF
Uniprot:Q54QI0
Length = 1658
Score = 159 (61.0 bits), Expect = 1.0e-12, Sum P(3) = 1.0e-12
Identities = 56/205 (27%), Positives = 91/205 (44%)
Query: 611 KEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKL 670
KE K I Q++ F+I + D + I+DQHA E+ E L + + K
Sbjct: 1461 KEMLQNFKFITQWDNKFLICEADGIVLILDQHAVSERIKLEILERK-YFGEN------KF 1513
Query: 671 DLTPEEE----VVASMHMDIIRKNGFSLEE--DPHALAGLRFRLKAVPFSKKITFGVEDV 724
DL P E + ++++R LE+ + VP + GV D+
Sbjct: 1514 DLCPMPERTRWSLTEYELELMRIYTKPLEQWGFKWTFNKTSINISQVPMFCLVGLGVNDL 1573
Query: 725 KDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKI 784
++ + L ++G A S P +LAS+ACR++I G+ L R K+
Sbjct: 1574 REFLYQLESSKG------------ATSNRPPAAHRILASKACRTAIKFGNKLSREICIKL 1621
Query: 785 LEHLADLNSPWNCPHGRPTMRHLVD 809
LE L + N P+ C HGRP++ L++
Sbjct: 1622 LEDLNECNIPFQCAHGRPSIIPLIN 1646
Score = 105 (42.0 bits), Expect = 1.0e-12, Sum P(3) = 1.0e-12
Identities = 55/233 (23%), Positives = 101/233 (43%)
Query: 8 NSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVD 67
N+ I+ + + V ++ + VI L A++E++ NS+DA AT I I++ F+V D
Sbjct: 21 NNNVIKKLKEEVSLKVRSSVVIVSLEQAIEEIIFNSIDARATVISISIN-LSNLSFEVKD 79
Query: 68 NGCGISPNNFKVRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITV 127
NG G+S N K C + ++ + T G +S+ SSL D I
Sbjct: 80 NGFGLSYENLKFVGDRNCTSKINSLSDLKSL--KTFGYRGESLA-SLSNISSL-DIISNS 135
Query: 128 FGMNIYNCLEPVAICKSDSCKV-EGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLV 186
FG I + ++ K D K+ + S + N+ + N+ + + K +
Sbjct: 136 FGSTIQ---KSISFGKVDQFKILDNNNSSSCDNNNNNVNNNNINNNNNNSIANGTIVK-I 191
Query: 187 NELYKGANSRQYPIAIMNF-IVPTRACDVNVTPDKRKVFFS--DECSILHALR 236
+L+K R+ + N ++ + ++ + K+ FS DE L L+
Sbjct: 192 RDLFKNYPVRRQGLYHPNLKLIIKKRIEI-IALSFPKIVFSVYDETKSLTILK 243
Score = 71 (30.1 bits), Expect = 2.9e-09, Sum P(3) = 2.9e-09
Identities = 42/155 (27%), Positives = 69/155 (44%)
Query: 108 KSV-VLKTQGSSSLKDNIITVFGMNIYNCLEPVAI--------CKSDSCKVEGFLSKPGQ 158
KS+ +LKT +S +G + N LE V S S + G+LS P +
Sbjct: 237 KSLTILKTPKDTSFLSYFKHFYGQEMMNKLEYVTSENYNNTTNNNSSSYYLSGYLSSPHK 296
Query: 159 GSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTP 218
G QY ++N+R V K+ + VN+LY+ +Y + N TR + NV+
Sbjct: 297 -KGHPNKSFQYIYLNNRIVLNTKLHRHVNQLYQ-----KY--RLFN---ATRKANANVSK 345
Query: 219 -DKRKVFFSDECSILHALREGLQ--EIYSPNNASY 250
K++V S+ IL L+ Y P++ ++
Sbjct: 346 IAKKEVIDSNPIFILFLRCSQLEYERSYEPSSKTF 380
Score = 49 (22.3 bits), Expect = 1.0e-12, Sum P(3) = 1.0e-12
Identities = 28/132 (21%), Positives = 58/132 (43%)
Query: 378 ESDSRSRCIQSSLNKFVTVSKRKYESIARPLTEMPLLRNQSLHCQMKKSNSDMDAVDTRS 437
E+D ++ S+ NK + E I ++ L +N+ + KSN + + ++
Sbjct: 1074 ENDIQNNIADSNGNKNKNTTTDNIEIIVLDDSDEDLPQNEQTTSKYFKSNEQLSSTESTK 1133
Query: 438 PVRRHLVDDIAKLNKIEPFKCNKADKVSKEIENILSSEGNTNE-KPREELVTQEKATPLL 496
+KLN+I K K S+++ ++S +T++ P + +TP
Sbjct: 1134 ----------SKLNQII-CKLEKESSQSQQLTIPITSTTSTSDLAPTSTSNSASTSTP-- 1180
Query: 497 NVPSIVSSSNDL 508
+ +I ++SN L
Sbjct: 1181 TIQTIKTTSNPL 1192
Score = 38 (18.4 bits), Expect = 1.4e-11, Sum P(3) = 1.4e-11
Identities = 10/51 (19%), Positives = 22/51 (43%)
Query: 464 VSKEIENILSSEGNTNEKPREELVTQEKATPLLNVPSIVSSSNDLKKNSED 514
+ +E E E ++ +EL +++ L + +LKK ++D
Sbjct: 1300 IKEEKEKEKEKEKEKEKEKEKELEKEKELEKELEKEKELEKEKELKKKNDD 1350
>UNIPROTKB|O95744 [details] [associations]
symbol:PMS2P2 "Putative postmeiotic segregation increased
2-like protein 2" species:9606 "Homo sapiens" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0006298 "mismatch repair" evidence=IBA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IBA]
[GO:0016446 "somatic hypermutation of immunoglobulin genes"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032407 "MutSalpha complex
binding" evidence=IBA] [GO:0006200 "ATP catabolic process"
evidence=IBA] InterPro:IPR002099 InterPro:IPR003594 GO:GO:0005524
GO:GO:0016887 GO:GO:0006298 GO:GO:0003697 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 GO:GO:0007131 GO:GO:0032407
GO:GO:0016446 eggNOG:COG0323 GO:GO:0032389 PANTHER:PTHR10073
EMBL:AB017005 IPI:IPI00032884 HSSP:P54278 ProteinModelPortal:O95744
SMR:O95744 STRING:O95744 PaxDb:O95744 PRIDE:O95744
GeneCards:GC07M074880 HGNC:HGNC:9127 neXtProt:NX_O95744
HOVERGEN:HBG108275 InParanoid:O95744 Genevestigator:O95744
Uniprot:O95744
Length = 297
Score = 194 (73.4 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 35/67 (52%), Positives = 52/67 (77%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+PI++ VH+IC+G V+ LS+AVK++V NSLDAGAT+I++ LK+YG + +V NGCG
Sbjct: 77 IKPIDRKSVHQICSGPVVLSLSTAVKKIVGNSLDAGATNIDLKLKDYGMDLIEVSGNGCG 136
Query: 72 ISPNNFK 78
+ NF+
Sbjct: 137 VEEENFE 143
>CGD|CAL0005779 [details] [associations]
symbol:MLH1 species:5476 "Candida albicans" [GO:0032139
"dinucleotide insertion or deletion binding" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0000404 "loop DNA binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0032389 "MutLalpha complex" evidence=IEA] [GO:0032390 "MutLbeta
complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005816 "spindle pole body" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0000710 "meiotic mismatch repair"
evidence=IEA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IEA] [GO:0000713 "meiotic heteroduplex formation"
evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR011186 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 CGD:CAL0005779 Prosite:PS00058
GO:GO:0005524 GO:GO:0005634 GO:GO:0006298 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 EMBL:AACQ01000151
EMBL:AACQ01000146 eggNOG:COG0323 KO:K08734 InterPro:IPR014762
PANTHER:PTHR10073 PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585
RefSeq:XP_712616.1 RefSeq:XP_712766.1 ProteinModelPortal:Q59SL0
STRING:Q59SL0 GeneID:3645595 GeneID:3645758 KEGG:cal:CaO19.11638
KEGG:cal:CaO19.4162 Uniprot:Q59SL0
Length = 717
Score = 158 (60.7 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 33/79 (41%), Positives = 55/79 (69%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
TI+ +++ V+++I AG++I ++A+KE++ENS+DA AT IEI +K+ G + Q+ DNG
Sbjct: 7 TIKRLDESVINKIAAGEIIIQPANALKEMLENSIDARATMIEILVKDGGLKLLQITDNGH 66
Query: 71 GISPNNFKVRAVFLCQAYA 89
GIS K+ LC+ +A
Sbjct: 67 GIS----KIDLPLLCERFA 81
Score = 97 (39.2 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 39/156 (25%), Positives = 69/156 (44%)
Query: 88 YALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSC 147
YA+ V F C G ++ V T+ +K+ I V+G I N L + +D
Sbjct: 193 YAIHCDNVGFSCKKY-GDPLQQV--NTRPQMPIKERIRVVYGSAIANELLEIDGISNDEL 249
Query: 148 ---KVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELY-----KGANSRQYP 199
KV G ++ + + + + F+N R V + + +N ++ KG++S Y
Sbjct: 250 GLVKVSGVMTNANYNNKKKI--QPIIFINHRLVTCEPLKRAINAVFSYFLPKGSHSFYY- 306
Query: 200 IAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHAL 235
++ + DVNV P KR+V F +E I+ +
Sbjct: 307 ---LSLEIKPENLDVNVHPTKREVRFLNEDEIIDTI 339
>ASPGD|ASPL0000056766 [details] [associations]
symbol:AN0126 species:162425 "Emericella nidulans"
[GO:0000710 "meiotic mismatch repair" evidence=IEA] [GO:0007131
"reciprocal meiotic recombination" evidence=IEA] [GO:0000713
"meiotic heteroduplex formation" evidence=IEA] [GO:0032139
"dinucleotide insertion or deletion binding" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0000404 "loop DNA binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0032390 "MutLbeta complex" evidence=IEA] [GO:0032389 "MutLalpha
complex" evidence=IEA] [GO:0044732 "mitotic spindle pole body"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR011186 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 Prosite:PS00058 GO:GO:0005739
GO:GO:0005524 EMBL:BN001308 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
EMBL:AACD01000004 GO:GO:0007131 GO:GO:0032407 GO:GO:0000795
eggNOG:COG0323 KO:K08734 OMA:SIQVVVK GO:GO:0005712 GO:GO:0032389
GO:GO:0032390 InterPro:IPR014762 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585 HOGENOM:HOG000176000
OrthoDB:EOG43XZBN GO:GO:0032139 GO:GO:0000404 RefSeq:XP_657730.1
ProteinModelPortal:Q5BH54 STRING:Q5BH54
EnsemblFungi:CADANIAT00002620 GeneID:2875899 KEGG:ani:AN0126.2
Uniprot:Q5BH54
Length = 744
Score = 165 (63.1 bits), Expect = 9.1e-12, Sum P(3) = 9.1e-12
Identities = 36/87 (41%), Positives = 55/87 (63%)
Query: 2 DVETPTNSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEE 61
D E P IR ++ VV++I AG++I A+KEL+EN++DAG+TSIEI +KE G +
Sbjct: 21 DTEGPRKPRKIRALDPDVVNKIAAGEIIVAPMHALKELIENAVDAGSTSIEILVKEGGLK 80
Query: 62 WFQVVDNGCGISPNNFKVRAVFLCQAY 88
Q+ DNG GI ++ + LC+ +
Sbjct: 81 LLQITDNGHGIDRDDLPI----LCERF 103
Score = 88 (36.0 bits), Expect = 9.1e-12, Sum P(3) = 9.1e-12
Identities = 39/149 (26%), Positives = 62/149 (41%)
Query: 88 YALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSC 147
YA+ GV F C V + T + + D I + G + N E V D
Sbjct: 213 YAVHCSGVAFSCRKHGDAGVS---ISTAVALNTIDRIRQIHGSAVAN--ELVEFSVKDE- 266
Query: 148 KVEGFLSKPGQGSGRNLGDRQ---YFFVNDRPVDLPKVSKLVNELYKGANSRQ-YPIAIM 203
K+ GF S G + N ++ F+N R V+ + + V + Y + +P +
Sbjct: 267 KL-GFTSS-GLVTNANYHVKRTTILLFINHRSVESTAIKRAVEQTYASFLPKGGHPFVYI 324
Query: 204 NFIVPTRACDVNVTPDKRKVFFSDECSIL 232
+ + DVNV P KR+V F +E I+
Sbjct: 325 DLEIEPHRLDVNVHPTKREVNFLNEDEII 353
Score = 38 (18.4 bits), Expect = 9.1e-12, Sum P(3) = 9.1e-12
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 399 RKYESIARPLTEMPLLRNQSLHCQMKKSNSDMD 431
RK S+ P T P +L Q++ + + +D
Sbjct: 420 RKITSMLSPATSQPPSATLNLEGQLENTQTVLD 452
>UNIPROTKB|Q5BH54 [details] [associations]
symbol:AN0126.2 "DNA mismatch repair protein Mlh1, putative
(AFU_orthologue; AFUA_5G11700)" species:227321 "Aspergillus
nidulans FGSC A4" [GO:0000795 "synaptonemal complex" evidence=IBA]
[GO:0003697 "single-stranded DNA binding" evidence=IBA] [GO:0005712
"chiasma" evidence=IBA] [GO:0006200 "ATP catabolic process"
evidence=IBA] [GO:0006298 "mismatch repair" evidence=IBA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IBA]
[GO:0016887 "ATPase activity" evidence=IBA] [GO:0032300 "mismatch
repair complex" evidence=IBA] [GO:0032389 "MutLalpha complex"
evidence=IBA] [GO:0032390 "MutLbeta complex" evidence=IBA]
[GO:0032407 "MutSalpha complex binding" evidence=IBA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR011186
InterPro:IPR013507 InterPro:IPR014763 Pfam:PF01119 SMART:SM00387
Prosite:PS00058 GO:GO:0005739 GO:GO:0005524 EMBL:BN001308
GO:GO:0016887 GO:GO:0006298 GO:GO:0003697 Gene3D:3.30.565.10
SUPFAM:SSF55874 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 EMBL:AACD01000004 GO:GO:0007131
GO:GO:0032407 GO:GO:0000795 eggNOG:COG0323 KO:K08734 OMA:SIQVVVK
GO:GO:0005712 GO:GO:0032389 GO:GO:0032390 InterPro:IPR014762
PANTHER:PTHR10073 PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585
HOGENOM:HOG000176000 OrthoDB:EOG43XZBN GO:GO:0032139 GO:GO:0000404
RefSeq:XP_657730.1 ProteinModelPortal:Q5BH54 STRING:Q5BH54
EnsemblFungi:CADANIAT00002620 GeneID:2875899 KEGG:ani:AN0126.2
Uniprot:Q5BH54
Length = 744
Score = 165 (63.1 bits), Expect = 9.1e-12, Sum P(3) = 9.1e-12
Identities = 36/87 (41%), Positives = 55/87 (63%)
Query: 2 DVETPTNSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEE 61
D E P IR ++ VV++I AG++I A+KEL+EN++DAG+TSIEI +KE G +
Sbjct: 21 DTEGPRKPRKIRALDPDVVNKIAAGEIIVAPMHALKELIENAVDAGSTSIEILVKEGGLK 80
Query: 62 WFQVVDNGCGISPNNFKVRAVFLCQAY 88
Q+ DNG GI ++ + LC+ +
Sbjct: 81 LLQITDNGHGIDRDDLPI----LCERF 103
Score = 88 (36.0 bits), Expect = 9.1e-12, Sum P(3) = 9.1e-12
Identities = 39/149 (26%), Positives = 62/149 (41%)
Query: 88 YALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSC 147
YA+ GV F C V + T + + D I + G + N E V D
Sbjct: 213 YAVHCSGVAFSCRKHGDAGVS---ISTAVALNTIDRIRQIHGSAVAN--ELVEFSVKDE- 266
Query: 148 KVEGFLSKPGQGSGRNLGDRQ---YFFVNDRPVDLPKVSKLVNELYKGANSRQ-YPIAIM 203
K+ GF S G + N ++ F+N R V+ + + V + Y + +P +
Sbjct: 267 KL-GFTSS-GLVTNANYHVKRTTILLFINHRSVESTAIKRAVEQTYASFLPKGGHPFVYI 324
Query: 204 NFIVPTRACDVNVTPDKRKVFFSDECSIL 232
+ + DVNV P KR+V F +E I+
Sbjct: 325 DLEIEPHRLDVNVHPTKREVNFLNEDEII 353
Score = 38 (18.4 bits), Expect = 9.1e-12, Sum P(3) = 9.1e-12
Identities = 9/33 (27%), Positives = 16/33 (48%)
Query: 399 RKYESIARPLTEMPLLRNQSLHCQMKKSNSDMD 431
RK S+ P T P +L Q++ + + +D
Sbjct: 420 RKITSMLSPATSQPPSATLNLEGQLENTQTVLD 452
>ZFIN|ZDB-GENE-060810-45 [details] [associations]
symbol:mlh3 "mutL homolog 3 (E. coli)" species:7955
"Danio rerio" [GO:0030983 "mismatched DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006298 "mismatch
repair" evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 ZFIN:ZDB-GENE-060810-45 GO:GO:0005524 GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
PANTHER:PTHR10073 GeneTree:ENSGT00550000074903 EMBL:BX957326
IPI:IPI00488975 Ensembl:ENSDART00000143694 Bgee:E9QGN2
Uniprot:E9QGN2
Length = 1171
Score = 133 (51.9 bits), Expect = 1.9e-11, Sum P(4) = 1.9e-11
Identities = 50/197 (25%), Positives = 84/197 (42%)
Query: 636 LFIVDQHAADEKYNFERLSQSTV-----------LNQQPLLRPLKLDLTPEEEVVASMHM 684
L +VDQHAA E+ E L + L + PL++++T EE +
Sbjct: 947 LVLVDQHAAHERVRLEGLIADSYEDDPDTPGKKRLCSSRVTPPLEINVTEEELRLLRSCQ 1006
Query: 685 DIIRKNGFSLEEDPHALAGLRFRLKAVP---FSKKITFGVEDVKDLISTLADNQGECSII 741
+R G +L+ L L+++P K+ T + +I T+A++ I
Sbjct: 1007 GFLR--GLALDVRFPKSESLSVFLESLPACFIEKESTELRRGRRSVIKTIAEDYLREHIE 1064
Query: 742 SSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGR 801
+ P V +LAS+AC +I D L + E ++ L+ P+ C HGR
Sbjct: 1065 LLRSTGRVRGILPLTVHNVLASQACHGAIKFNDVLNKEECCSLVSSLSSCRLPFQCAHGR 1124
Query: 802 PTMRHLVDLTTIRKNID 818
P++ L DL + + D
Sbjct: 1125 PSIVPLADLHHLEEQQD 1141
Score = 90 (36.7 bits), Expect = 1.9e-11, Sum P(4) = 1.9e-11
Identities = 23/59 (38%), Positives = 35/59 (59%)
Query: 14 PINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGI 72
PIN V ++ +G I L V+EL+ NS+DAGAT + + + + QV+DNG G+
Sbjct: 6 PIN--VQAQLRSGVAIFSLQQCVEELILNSIDAGATCVAVKIDIEACK-LQVIDNGSGM 61
Score = 66 (28.3 bits), Expect = 1.9e-11, Sum P(4) = 1.9e-11
Identities = 54/244 (22%), Positives = 89/244 (36%)
Query: 173 NDRPVDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSIL 232
N+ P P S + KG + I ++N D+ + P K + F D ++L
Sbjct: 282 NNSPTSYPVTS---SPKQKGGYDL-HGIYVINIKCHYSEYDICLEPAKSLIEFKDWDNVL 337
Query: 233 HALREGLQEIYSPNNASYSVNKVEQLIEPEKSGPSSGAESCMFLEQLSPDGNGCIEILNE 292
+ EG++ + N +N + P P AES ++ S + N E + E
Sbjct: 338 ICIEEGVKAFLTKENLVSELNTISNDGLP--CSPVRNAESSEKQKRSSEETNEACETMIE 395
Query: 293 QQISKGNTPKTVEV-DTLHSDALEGLVHSSNENGKGNFTLKAHDDKSADRLSKFNCMKLI 351
+ N V+V D + E + S+E GK L++ D L ++
Sbjct: 396 K-----NDSSVVDVADGVQMLEQESIYTESDE-GKA---LQSEDLPFQTTL--VGAAEIN 444
Query: 352 GPHNVPTEENCPSPSRVMAKNITEDGESDSRSRCI-----QSSLNKFVTVSKRKYESIAR 406
H C + S + S+S I Q SL KF T +K +
Sbjct: 445 NNHEEDENAVCSNISHTDSPLAVNKNVMGSKSHKISLPEAQDSLQKFYTPNKTSPKKRRM 504
Query: 407 PLTE 410
PL +
Sbjct: 505 PLND 508
Score = 51 (23.0 bits), Expect = 1.9e-11, Sum P(4) = 1.9e-11
Identities = 22/106 (20%), Positives = 47/106 (44%)
Query: 86 QAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSD 145
+A +L+ V F +N ++++ +SS + + G+N L V + +
Sbjct: 176 EAISLMHPSVSFTVKK---ENSAHMMVQLSKTSSTYYRFVQIHGLNRAQKLGEVNY-EHE 231
Query: 146 SCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYK 191
++ G + + G + Q+ FVN+R + ++ K +N L K
Sbjct: 232 QFQITGHIGREGHYNN----SLQFLFVNERLLLKTRIHKTLNCLLK 273
>UNIPROTKB|Q8A120 [details] [associations]
symbol:mutL "DNA mismatch repair protein MutL"
species:226186 "Bacteroides thetaiotaomicron VPI-5482" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] HAMAP:MF_00149
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 InterPro:IPR020667
Pfam:PF01119 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:AE015928 GenomeReviews:AE015928_GR
eggNOG:COG0323 HSSP:P23367 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032300 HOGENOM:HOG000256550 KO:K03572
RefSeq:NP_812762.1 ProteinModelPortal:Q8A120 GeneID:1072957
KEGG:bth:BT_3851 PATRIC:21062728 OMA:EEFGNNS ProtClustDB:CLSK823666
BioCyc:BTHE226186:GJXV-3925-MONOMER Uniprot:Q8A120
Length = 640
Score = 127 (49.8 bits), Expect = 2.2e-11, Sum P(3) = 2.2e-11
Identities = 38/137 (27%), Positives = 65/137 (47%)
Query: 118 SSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPV 177
S L+ I+ +FG + L + + + K+ G+++KP + R G QYFFVN R +
Sbjct: 203 SPLRQRILAIFGKKLNQQLLNIEV-NTTMVKISGYIAKPE--TARKKGAHQYFFVNGRYM 259
Query: 178 DLPKVSKLVNELYKGANSRQYPIA-IMNFIVPTRACDVNVTPDKRKVFFSDECSILHALR 236
P K V E Y+ ++ + F V DVN+ P K ++ F +E +I L
Sbjct: 260 RHPYFHKAVMEAYEQLIPVGEQVSYFIYFEVDPANIDVNIHPTKTEIKFENEQAIWQILS 319
Query: 237 EGLQEIYSPNNASYSVN 253
++E +A S++
Sbjct: 320 ASVKESLGKFSAIPSID 336
Score = 127 (49.8 bits), Expect = 2.2e-11, Sum P(3) = 2.2e-11
Identities = 44/160 (27%), Positives = 75/160 (46%)
Query: 9 SPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDN 68
S I + V ++I AG+VI+ +S +KELVEN++DA A +I + + + G+ Q++D+
Sbjct: 2 SDIIHLLPDSVANQIAAGEVIQRPASVIKELVENAIDADAQNIHVLVTDAGKTCIQIIDD 61
Query: 69 GCGISPNNFKVRAVFLCQAYALIAKGVRFVCTNTTGKN---------VKSVVLKTQGSSS 119
G G+S + R F A + I + T G V V LKT+ S
Sbjct: 62 GKGMSETD--ARLSFERHATSKIREAADLFALRTMGFRGEALASIAAVAQVELKTRLESE 119
Query: 120 LKDNIITVFGMNIYNCLEPVAICKSDSCKVEG-FLSKPGQ 158
+ + G + + E V+ K + V+ F + P +
Sbjct: 120 ELGTKLVIAGSKVES-QEAVSCSKGSNFSVKNLFFNVPAR 158
Score = 102 (41.0 bits), Expect = 2.2e-11, Sum P(3) = 2.2e-11
Identities = 47/186 (25%), Positives = 78/186 (41%)
Query: 622 QFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQ---QPLLRPLKLDLTPEEEV 678
QF FI+ + L ++DQH A + F+R Q Q +L P L L E
Sbjct: 460 QFKGRFILTSVKSGLMLIDQHRAHIRVLFDRYMVQIKQKQGVSQGVLFPEILQLPASEAA 519
Query: 679 VASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGEC 738
V MD + GF L + L G + + +P + VE V++++ T A +G
Sbjct: 520 VLQGIMDDLSAVGFDLSD----LGGGSYAINGIPSGIEGLNPVELVRNMLHT-AMEKGN- 573
Query: 739 SIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCP 798
D + + + A+ +RA ++I+ G L EM +++ L SP P
Sbjct: 574 --------DVKEEI--QNILALTLARA--AAIVYGQVLSNEEMVSLVDSLFACPSPNYTP 621
Query: 799 HGRPTM 804
G+ +
Sbjct: 622 DGKTVL 627
Score = 58 (25.5 bits), Expect = 2.2e-11, Sum P(3) = 2.2e-11
Identities = 23/77 (29%), Positives = 32/77 (41%)
Query: 463 KVSKEIENILSSEGNTNEKPREE--LVTQEKATPLLNVPSIV--SSSNDLKKNSEDLSVA 518
K SK E E + P EE +V +EK ++ S S+S+ L N +
Sbjct: 396 KASKMNEPQQEPEMDWENSPFEEEPMVAEEKTISAVSAASSTFSSASSTLYANESVIEKG 455
Query: 519 ASHLQFSGSILDAPVPS 535
HLQF G + V S
Sbjct: 456 NLHLQFKGRFILTSVKS 472
>UNIPROTKB|E1C7F3 [details] [associations]
symbol:LOC100859200 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030983
"mismatched DNA binding" evidence=IEA] [GO:0000795 "synaptonemal
complex" evidence=IEA] [GO:0001673 "male germ cell nucleus"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005712 "chiasma" evidence=IEA] [GO:0006298 "mismatch repair"
evidence=IEA] [GO:0007130 "synaptonemal complex assembly"
evidence=IEA] [GO:0007140 "male meiosis" evidence=IEA] [GO:0007144
"female meiosis I" evidence=IEA] [GO:0008104 "protein localization"
evidence=IEA] [GO:0019237 "centromeric DNA binding" evidence=IEA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0008104
GO:GO:0003682 GO:GO:0006298 GO:GO:0019237 GO:GO:0001673
GO:GO:0007140 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007130 GO:GO:0007144 GO:GO:0000795
GO:GO:0005712 InterPro:IPR014762 PANTHER:PTHR10073 OMA:HGAIKFN
GeneTree:ENSGT00550000074903 EMBL:AADN02003465 IPI:IPI00593431
ProteinModelPortal:E1C7F3 Ensembl:ENSGALT00000016763 Uniprot:E1C7F3
Length = 1424
Score = 144 (55.7 bits), Expect = 3.1e-11, Sum P(4) = 3.1e-11
Identities = 51/200 (25%), Positives = 93/200 (46%)
Query: 636 LFIVDQHAADEKYNFERL------SQSTVLNQQPLLR-----PLKLDLTPEEEVVASMHM 684
L +VDQHAA E+ E+L ++T ++ LL PL++++T E+ +
Sbjct: 1193 LVLVDQHAAHERIRLEQLIADSYDKEATACGKKKLLSSSVSPPLEIEVTEEQRRILWCCY 1252
Query: 685 DIIRKNGFSLEEDPHALAGLRFRLKAVPF------SKKITFGVEDV-KDLISTLADNQGE 737
++ G L P + + +K VP + ++ + V K ++ L Q E
Sbjct: 1253 KNLKDLGLELSF-PETNSSM-ILVKKVPLCFIEREANELRRKRQPVTKSIVEELIQEQVE 1310
Query: 738 CSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNC 797
++ + M A P +LAS+AC +I D+L E +++E L+ P+ C
Sbjct: 1311 --LVQT--MRGAQGTLPLTFLKVLASQACHGAIKFNDSLTSEESCRLMEALSSCQLPFQC 1366
Query: 798 PHGRPTMRHLVDLTTIRKNI 817
HGRP+M L D+ +++ +
Sbjct: 1367 AHGRPSMMPLADIDHLQEEM 1386
Score = 89 (36.4 bits), Expect = 3.1e-11, Sum P(4) = 3.1e-11
Identities = 40/148 (27%), Positives = 69/148 (46%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ + + V R+ +G + L V+ELV NS+DA AT + + + + QVVDNG G
Sbjct: 2 IKHLAEDVQARLRSGVTVTSLGQCVEELVLNSIDAKATCVAVRVDLEAFK-IQVVDNGSG 60
Query: 72 ISPNNF-KV-RAVFL--CQAYALIAK----GVRFVCTNTTGKNVKSVVLKTQGSSSLKDN 123
+ + K+ + F C + A + K G R + N+ SVV + SS
Sbjct: 61 MGKEDLSKMGKRYFTSKCSSVADLEKLTFYGFRGEALASIA-NMASVVEVSSKSSKTAKT 119
Query: 124 IITVFGMNIYNCLEPVAICKSDSCKVEG 151
+ +F + LE +C+++ + G
Sbjct: 120 FVKLFHNG--HALE---VCEAELSRPSG 142
Score = 65 (27.9 bits), Expect = 3.1e-11, Sum P(4) = 3.1e-11
Identities = 34/157 (21%), Positives = 57/157 (36%)
Query: 335 DDKSADRLSKFNCMKLIGPHNV-PTEENCPSPSRVMAK---NITEDGESDSRSRCIQSSL 390
DDKS K C ++I + V + V+ K N+TE ++ + C SS
Sbjct: 386 DDKSIQENFKKACDEIIDSYEVCKLQSKDVKRKSVVGKKSSNLTESNKNTQETVCEISSN 445
Query: 391 NKFVTVS---KRKYESIARPL---TEMPLLRNQSLHCQMKKSNSDMDAVDTRSPVRRHLV 444
K ++ + K I P T + + + K +NS DT +L
Sbjct: 446 QKIAELAGQCRNKKAEIPLPKKDDTTSNFITSDMSEQEPKDTNSSQKGCDTHLKSSENLH 505
Query: 445 DDIAKLNKIEPFKCNKADKVSKEIENILSSEGNTNEK 481
+ + E K + + + EN GN +K
Sbjct: 506 SSFTEGARSEIIKTDSCADLRRCAENCAKDVGNQQDK 542
Score = 57 (25.1 bits), Expect = 4.4e-08, Sum P(4) = 4.4e-08
Identities = 19/83 (22%), Positives = 41/83 (49%)
Query: 109 SVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQ 168
S+VL+ + + ++G+ L + KS ++ G++S G + +N+ Q
Sbjct: 196 SMVLQLPKTRDVYSRFCQIYGLGRSQKLREIKH-KSGGFEISGYISSEGHYN-KNM---Q 250
Query: 169 YFFVNDRPVDLPKVSKLVNELYK 191
+ +VN R V ++ KL++ L +
Sbjct: 251 FLYVNRRLVLKTRLHKLIDFLLR 273
Score = 53 (23.7 bits), Expect = 4.8e-10, Sum P(4) = 4.8e-10
Identities = 23/119 (19%), Positives = 49/119 (41%)
Query: 374 TEDGESDSRSRCIQSSLNKFVTVSKRKYESIARPLTE-MPLLRNQSLHCQMKKSNSDMDA 432
T+ D+ S ++SS N F+ ++Y+S + + + + + + M
Sbjct: 906 TDASRKDNHSYGLESSNNDFLYNPCQRYKSSVEEMRDGCSVSKGDACPQSVDLRAESMKC 965
Query: 433 VDTRSPVRRHLVDDIAKLNKIEPFKCNK--ADKVSKEIENILSSEGNTNEK-PREELVT 488
+ SP+ + + + PF K D + ++ E++L NEK P + +T
Sbjct: 966 TVSLSPLSSTEGEYAVSASSVLPFPAKKDGMDTICED-ESMLDESSKQNEKEPEVDCMT 1023
Score = 45 (20.9 bits), Expect = 2.5e-09, Sum P(3) = 2.5e-09
Identities = 28/101 (27%), Positives = 46/101 (45%)
Query: 382 RSRCIQSSLNKFVTVSKRKYESIARPLTEMPL-LRNQSLHCQMKKSNSDMDAVDTRSPVR 440
R RC+ L +F V ++K E+I+ + L LRN + C M + TR
Sbjct: 158 RRRCMDPVL-EFERV-RQKVEAISLMHPSVSLSLRND-ISCSMV-----LQLPKTRDVYS 209
Query: 441 RHL-VDDIAKLNKIEPFKCNKADKVSKEIENILSSEGNTNE 480
R + + + K+ K +K+ EI +SSEG+ N+
Sbjct: 210 RFCQIYGLGRSQKLREIK-HKSGGF--EISGYISSEGHYNK 247
Score = 43 (20.2 bits), Expect = 3.1e-11, Sum P(4) = 3.1e-11
Identities = 11/43 (25%), Positives = 21/43 (48%)
Query: 198 YPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQ 240
Y I ++N DV++ P K + F + +L + EG++
Sbjct: 304 YGIFVLNVTCAYSDYDVSLEPTKTLIEFQNWDVLLACVEEGVK 346
>TIGR_CMR|VC_0345 [details] [associations]
symbol:VC_0345 "DNA mismatch repair protein MutL"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0006298
"mismatch repair" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] HAMAP:MF_00149 InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006298 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 eggNOG:COG0323
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585 KO:K03572
ProtClustDB:PRK00095 PIR:A82334 RefSeq:NP_229999.1
ProteinModelPortal:Q9KV13 SMR:Q9KV13 DNASU:2615058 GeneID:2615058
KEGG:vch:VC0345 PATRIC:20079763 OMA:YAEGRDQ Uniprot:Q9KV13
Length = 653
Score = 143 (55.4 bits), Expect = 3.9e-11, Sum P(4) = 3.9e-11
Identities = 31/62 (50%), Positives = 45/62 (72%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
TIR + + ++I AG+V++ +S VKELVENSLDAGAT I+I L++ G + ++ DNG
Sbjct: 2 TIRILPARLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDLEKGGAKLIRIRDNGS 61
Query: 71 GI 72
GI
Sbjct: 62 GI 63
Score = 74 (31.1 bits), Expect = 3.9e-11, Sum P(4) = 3.9e-11
Identities = 22/87 (25%), Positives = 44/87 (50%)
Query: 148 KVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGA-NSRQYPIAIMNFI 206
K+ G+++ P +G+ R D QY +VN R + ++ + + Y+ + Q+ ++
Sbjct: 235 KLHGWITTP-EGA-RQQSDLQYCYVNGRMMRDKLINHAIRQSYETSLRVDQFATYVLFIE 292
Query: 207 VPTRACDVNVTPDKRKVFFSDECSILH 233
+ DVNV P K +V F + ++H
Sbjct: 293 LDPHQVDVNVHPAKHEVRFH-QARLVH 318
Score = 61 (26.5 bits), Expect = 3.9e-11, Sum P(4) = 3.9e-11
Identities = 16/42 (38%), Positives = 20/42 (47%)
Query: 654 SQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLE 695
+Q L QPLL PL L L E VA H + + G L+
Sbjct: 509 AQHGALKAQPLLVPLALKLNESEWQVAQRHSSALLQLGIELK 550
Score = 46 (21.3 bits), Expect = 3.9e-11, Sum P(4) = 3.9e-11
Identities = 16/54 (29%), Positives = 25/54 (46%)
Query: 245 PNNASYSVNKVEQL---IEPEKSGPSSGAESCMFLEQLSPDGNGCIEILNEQQI 295
P+ AS V+ +E + I EK G + + +L SP G I + QQ+
Sbjct: 448 PSTASTIVSSIEAVKANIAIEKLGKAIQVVAGQYLLMSSPQGCVLISLYQAQQL 501
>SGD|S000006085 [details] [associations]
symbol:MLH3 "Protein involved in mismatch repair and meiotic
recombination" species:4932 "Saccharomyces cerevisiae" [GO:0005712
"chiasma" evidence=IBA] [GO:0032390 "MutLbeta complex"
evidence=IPI] [GO:0007131 "reciprocal meiotic recombination"
evidence=IMP] [GO:0003674 "molecular_function" evidence=ND]
[GO:0006298 "mismatch repair" evidence=IEA;IMP] [GO:0005634
"nucleus" evidence=IEA;IPI] [GO:0030983 "mismatched DNA binding"
evidence=IEA;IBA] [GO:0000795 "synaptonemal complex" evidence=IBA]
[GO:0016887 "ATPase activity" evidence=IBA] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR014790
Pfam:PF08676 SMART:SM00853 SGD:S000006085 GO:GO:0005524
GO:GO:0016887 GO:GO:0006298 EMBL:BK006949 Gene3D:3.30.565.10
SUPFAM:SSF55874 EMBL:X96770 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0000795 eggNOG:COG0323 GO:GO:0005712 GO:GO:0032390
PANTHER:PTHR10073 KO:K08739 EMBL:Z73520 PIR:S65175
RefSeq:NP_015161.1 ProteinModelPortal:Q12083 SMR:Q12083
DIP:DIP-2414N IntAct:Q12083 MINT:MINT-678752 STRING:Q12083
EnsemblFungi:YPL164C GeneID:855939 KEGG:sce:YPL164C CYGD:YPL164c
GeneTree:ENSGT00550000074903 HOGENOM:HOG000113600 OMA:KACRSAI
OrthoDB:EOG46X2HJ NextBio:980696 Genevestigator:Q12083
GermOnline:YPL164C Uniprot:Q12083
Length = 715
Score = 124 (48.7 bits), Expect = 4.4e-11, Sum P(3) = 4.4e-11
Identities = 29/90 (32%), Positives = 49/90 (54%)
Query: 721 VEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNE 780
++D K L L+ + S+ Y + V P+ +L S+ACRS++M GD L R E
Sbjct: 626 LKDFKKLPMDLSHFENYTSVDKLYWWKYSSCV-PTVFHEILNSKACRSAVMFGDELTRQE 684
Query: 781 MQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
++ L+ ++P+ C HGRP+M + +L
Sbjct: 685 CIILISKLSRCHNPFECAHGRPSMVPIAEL 714
Score = 100 (40.3 bits), Expect = 4.4e-11, Sum P(3) = 4.4e-11
Identities = 24/73 (32%), Positives = 44/73 (60%)
Query: 9 SPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDN 68
S IR ++ V R+ + L+SAV+E+V+NS+DA AT+I++ + + F V D+
Sbjct: 2 SQHIRKLDSDVSERLKSQACTVSLASAVREIVQNSVDAHATTIDVMI-DLPNLSFAVYDD 60
Query: 69 GCGISPNNFKVRA 81
G G++ ++ + A
Sbjct: 61 GIGLTRSDLNILA 73
Score = 62 (26.9 bits), Expect = 4.4e-11, Sum P(3) = 4.4e-11
Identities = 19/48 (39%), Positives = 26/48 (54%)
Query: 616 RMKVIGQFNLGFIIGK-LDQD------LFIVDQHAADEKYNFERLSQS 656
+ +VI Q + FI+ + LDQ L +VDQHA DE+ E L S
Sbjct: 492 KYEVINQVDKKFILIRCLDQSIHNCPLLVLVDQHACDERIRLEELFYS 539
Score = 38 (18.4 bits), Expect = 7.0e-05, Sum P(3) = 7.0e-05
Identities = 24/101 (23%), Positives = 45/101 (44%)
Query: 15 INKGVVHRICAGQVIKDLSSAV--KELVEN-SLDAGATSIE--IALKEYGEEWFQVVD-N 68
I +G+ QV++++ A+ ++++ SL IE I+ G + Q + N
Sbjct: 224 ITEGLTKHQQMSQVLRNVFGAIIPPDMLKKVSLKFNEYQIEGIISKMPVGLKDLQFIYIN 283
Query: 69 GCGISPNNFKVRAVFLCQAYALIAKGVRFVCTNTTGKNVKS 109
G + + F+ L QA KG+ + T + GK +S
Sbjct: 284 GRRYADSAFQGYVDSLFQAQDFGEKGMSLLKTKSVGKPYRS 324
>TIGR_CMR|CBU_1083 [details] [associations]
symbol:CBU_1083 "DNA mismatch repair protein MutL"
species:227377 "Coxiella burnetii RSA 493" [GO:0006298 "mismatch
repair" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_00149 InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0006298
EMBL:AE016828 GenomeReviews:AE016828_GR Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 eggNOG:COG0323 HSSP:P23367
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
HOGENOM:HOG000256550 KO:K03572 OMA:FLFINNR ProtClustDB:PRK00095
RefSeq:NP_820082.2 ProteinModelPortal:Q83CM9 SMR:Q83CM9
GeneID:1208984 KEGG:cbu:CBU_1083 PATRIC:17930897
BioCyc:CBUR227377:GJ7S-1075-MONOMER Uniprot:Q83CM9
Length = 574
Score = 125 (49.1 bits), Expect = 7.4e-11, Sum P(3) = 7.4e-11
Identities = 25/65 (38%), Positives = 43/65 (66%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR +N ++I AG+V++ +S VKEL+ENS+DA A+ I + + + G + ++ D+G G
Sbjct: 3 IRRLNDQTANQIAAGEVVERPASVVKELIENSIDAHASCIRVDILQGGAKQIRIQDDGDG 62
Query: 72 ISPNN 76
I P +
Sbjct: 63 IHPED 67
Score = 80 (33.2 bits), Expect = 7.4e-11, Sum P(3) = 7.4e-11
Identities = 38/191 (19%), Positives = 83/191 (43%)
Query: 627 FIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDI 686
+I+ + ++ L IVD HAA E+ +E++ + L + L + + ++ +++ +
Sbjct: 395 YILSQNEKGLVIVDMHAAHERILYEKMKKQ--------LAEVGLAM---QSLLVPINLSL 443
Query: 687 IRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDV---KDLISTLADNQGECSIISS 743
+ + + + A L F +++ K + + K+L + + D +++
Sbjct: 444 NPQEITAWQTNKALFARLGFEIESFGPDKIVVRRHPSLLKPKNLENLIRD------VLAD 497
Query: 744 YKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPT 803
S R+ A LA+ AC +++ L EM+ +L + C HGRPT
Sbjct: 498 LITHNTTSRVGERINAALATLACHAALRAPHYLTIEEMEALLREMEKTEHGGLCNHGRPT 557
Query: 804 MRH--LVDLTT 812
+ + +L T
Sbjct: 558 WKQFDIAELDT 568
Score = 75 (31.5 bits), Expect = 7.4e-11, Sum P(3) = 7.4e-11
Identities = 34/144 (23%), Positives = 70/144 (48%)
Query: 106 NVKSVV-LKTQGSSSLKDNII-TVFGMNIYNCLEPVAICKSDS-CKVEGFLSKPGQGSGR 162
N K ++ K+ + S ++N I ++ G +++ +AI S S ++G++++ R
Sbjct: 191 NEKEIIHFKSATTISGQENRIKSILG-DVF-MQSALAIEFSQSGLTLKGYIAEAAYT--R 246
Query: 163 NLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSR-QYPIAIMNFIVPTRACDVNVTPDKR 221
+ D QY +VN R V V++ + + Y ++P ++ + D+NV P K
Sbjct: 247 SQPDLQYIYVNGRFVRDKLVAQALRQAYHDVLFHGRHPAYVLYLEIDPAFVDINVHPTKH 306
Query: 222 KVFFSD----ECSILHALREGLQE 241
+V F D ++HA++ L +
Sbjct: 307 EVRFRDPQWVRDFLIHAVKTALAQ 330
>WB|WBGene00003373 [details] [associations]
symbol:mlh-1 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006298 "mismatch
repair" evidence=IEA] [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR011186 InterPro:IPR013507
InterPro:IPR014763 Pfam:PF01119 SMART:SM00387 Prosite:PS00058
GO:GO:0005524 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 GO:GO:0000795 eggNOG:COG0323 KO:K08734 OMA:SIQVVVK
GO:GO:0005712 GO:GO:0032389 GO:GO:0032390 InterPro:IPR014762
PANTHER:PTHR10073 PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585
HOGENOM:HOG000176000 GeneTree:ENSGT00550000074923 HSSP:P54278
EMBL:Z92813 PIR:T25389 RefSeq:NP_499796.2 ProteinModelPortal:Q9XU10
SMR:Q9XU10 DIP:DIP-24835N IntAct:Q9XU10 MINT:MINT-227084
STRING:Q9XU10 EnsemblMetazoa:T28A8.7.1 EnsemblMetazoa:T28A8.7.2
GeneID:176783 KEGG:cel:CELE_T28A8.7 UCSC:T28A8.7.1 CTD:176783
WormBase:T28A8.7 InParanoid:Q9XU10 NextBio:893988 Uniprot:Q9XU10
Length = 758
Score = 144 (55.7 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 33/78 (42%), Positives = 51/78 (65%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ + + VV+R+ AG+V+ +A+KELVENSLDAGAT I + ++ G + QV DNG G
Sbjct: 4 IQRLPQDVVNRMAAGEVLARPCNAIKELVENSLDAGATEIMVNMQNGGLKLLQVSDNGKG 63
Query: 72 ISPNNFKVRAVFLCQAYA 89
I +F + +C+ +A
Sbjct: 64 IEREDFAL----VCERFA 77
Score = 90 (36.7 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 30/139 (21%), Positives = 62/139 (44%)
Query: 113 KTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVE--GFLSKPGQGSGRNLGD---- 166
+T+G + +D + + G ++ + + P+++ S K G +SKP + +
Sbjct: 199 RTKGDGNFRDVVCNLLGRDVADTILPLSL-NSTRLKFTFTGHISKPIASATAAIAQNRKT 257
Query: 167 -RQYF--FVNDRPVDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKV 223
R +F F+N R V + ++E+ GA ++ + DVNV P K V
Sbjct: 258 SRSFFSVFINGRSVRCDILKHPIDEVL-GARQLHAQFCALHLQIDETRIDVNVHPTKNSV 316
Query: 224 FFSDECSILHALREGLQEI 242
F ++ I+ +R +++
Sbjct: 317 IFLEKEEIIEEIRAYFEKV 335
>UNIPROTKB|Q9XU10 [details] [associations]
symbol:mlh-1 "Protein MLH-1" species:6239 "Caenorhabditis
elegans" [GO:0006200 "ATP catabolic process" evidence=IBA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0032407 "MutSalpha
complex binding" evidence=IBA] [GO:0032390 "MutLbeta complex"
evidence=IBA] [GO:0032389 "MutLalpha complex" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0016887
"ATPase activity" evidence=IBA] [GO:0007131 "reciprocal meiotic
recombination" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0005712 "chiasma" evidence=IBA] [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0000795
"synaptonemal complex" evidence=IBA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR011186 InterPro:IPR013507
InterPro:IPR014763 Pfam:PF01119 SMART:SM00387 Prosite:PS00058
GO:GO:0005524 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 GO:GO:0000795 eggNOG:COG0323 KO:K08734 OMA:SIQVVVK
GO:GO:0005712 GO:GO:0032389 GO:GO:0032390 InterPro:IPR014762
PANTHER:PTHR10073 PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585
HOGENOM:HOG000176000 GeneTree:ENSGT00550000074923 HSSP:P54278
EMBL:Z92813 PIR:T25389 RefSeq:NP_499796.2 ProteinModelPortal:Q9XU10
SMR:Q9XU10 DIP:DIP-24835N IntAct:Q9XU10 MINT:MINT-227084
STRING:Q9XU10 EnsemblMetazoa:T28A8.7.1 EnsemblMetazoa:T28A8.7.2
GeneID:176783 KEGG:cel:CELE_T28A8.7 UCSC:T28A8.7.1 CTD:176783
WormBase:T28A8.7 InParanoid:Q9XU10 NextBio:893988 Uniprot:Q9XU10
Length = 758
Score = 144 (55.7 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 33/78 (42%), Positives = 51/78 (65%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ + + VV+R+ AG+V+ +A+KELVENSLDAGAT I + ++ G + QV DNG G
Sbjct: 4 IQRLPQDVVNRMAAGEVLARPCNAIKELVENSLDAGATEIMVNMQNGGLKLLQVSDNGKG 63
Query: 72 ISPNNFKVRAVFLCQAYA 89
I +F + +C+ +A
Sbjct: 64 IEREDFAL----VCERFA 77
Score = 90 (36.7 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 30/139 (21%), Positives = 62/139 (44%)
Query: 113 KTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVE--GFLSKPGQGSGRNLGD---- 166
+T+G + +D + + G ++ + + P+++ S K G +SKP + +
Sbjct: 199 RTKGDGNFRDVVCNLLGRDVADTILPLSL-NSTRLKFTFTGHISKPIASATAAIAQNRKT 257
Query: 167 -RQYF--FVNDRPVDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKV 223
R +F F+N R V + ++E+ GA ++ + DVNV P K V
Sbjct: 258 SRSFFSVFINGRSVRCDILKHPIDEVL-GARQLHAQFCALHLQIDETRIDVNVHPTKNSV 316
Query: 224 FFSDECSILHALREGLQEI 242
F ++ I+ +R +++
Sbjct: 317 IFLEKEEIIEEIRAYFEKV 335
>UNIPROTKB|Q5FBZ6 [details] [associations]
symbol:PMS1 "PMS1 protein homolog 1" species:9606 "Homo
sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006298
"mismatch repair" evidence=IEA] [GO:0030983 "mismatched DNA
binding" evidence=IEA] InterPro:IPR009071 InterPro:IPR002099
InterPro:IPR013507 Pfam:PF01119 Pfam:PF00505 GO:GO:0005524
Gene3D:1.10.30.10 SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118
GO:GO:0006298 EMBL:AC013468 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
PANTHER:PTHR10073 EMBL:AC008122 UniGene:Hs.111749 HGNC:HGNC:9121
HOGENOM:HOG000039972 HOVERGEN:HBG031886 ChiTaRS:PMS1 EMBL:AB102872
IPI:IPI00917284 SMR:Q5FBZ6 STRING:Q5FBZ6 Ensembl:ENST00000409593
UCSC:uc002url.3 Uniprot:Q5FBZ6
Length = 555
Score = 147 (56.8 bits), Expect = 6.6e-10, Sum P(2) = 6.6e-10
Identities = 73/301 (24%), Positives = 123/301 (40%)
Query: 149 VEGFLSK-PGQGSGRNLG--DRQYFFVNDRPVDLPKVSKLVNELYK----GANSRQYPIA 201
+ GFL K S +L +R + F+N RPV + KL+ Y ++R YP+
Sbjct: 21 LSGFLPKCDADHSFTSLSTPERSFIFINSRPVHQKDILKLIRHHYNLKCLKESTRLYPVF 80
Query: 202 IMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSP--NNASYSVNKVEQLI 259
+ VPT DVN+TPDK +V ++ S+L AL + Y P + SY NK + +
Sbjct: 81 FLKIDVPTADVDVNLTPDKSQVLLQNKESVLIALENLMTTCYGPLPSTNSYENNKTD--V 138
Query: 260 EPEKSGPSSGAESCMFLEQLSPDGNGCIEILNEQQISKGNTPKTVEVDTLHSDALEGLVH 319
S AE+ + ++ G + + I N E D L +
Sbjct: 139 SAADIVLSKTAETDVLFNKVESSGKNYSNV-DTSVIPFQNDMHNDESGKNTDDCLNHQI- 196
Query: 320 SSNENGKGNFTLKAHD-DKSADRLSKFNCMKLIGPHNVPTE--ENC--PSPSRVMAKN-- 372
S + G G+ + + + DK+ + M + N TE + C S ++N
Sbjct: 197 SIGDFGYGHCSSEISNIDKNTKNAFQDISMSNVSWENSQTEYSKTCFISSVKHTQSENGN 256
Query: 373 ---ITEDGESDSRSRCIQSSLNKFVTVSKRKY--ESIARPLTEMPLL-RNQSLHCQMKKS 426
I E GE++ + SS S+ S+ + + +L +SL C++ +
Sbjct: 257 KDHIDESGENEEEAGLENSSEISADEWSRGNILKNSVGENIEPVKILVPEKSLPCKVSNN 316
Query: 427 N 427
N
Sbjct: 317 N 317
Score = 79 (32.9 bits), Expect = 6.6e-10, Sum P(2) = 6.6e-10
Identities = 35/141 (24%), Positives = 58/141 (41%)
Query: 677 EVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTL----- 731
+V+ M D R +G + DP A F++K +P IT +++ + + L
Sbjct: 413 DVLYKMTADDQRYSGSTYLSDPRLTAN-GFKIKLIP-GVSITENYLEIEGMANCLPFYGV 470
Query: 732 ADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADL 791
AD + + I + P +V + L A R S + L + ++Q I+ +
Sbjct: 471 ADLKEILNAILNRNAKEVYECRPRKVISYLEGEAVRLSRQLPMYLSKEDIQDIIYRMKHQ 530
Query: 792 --NSPWNCPHGRPTMRHLVDL 810
N C HGRP HL L
Sbjct: 531 FGNEIKECVHGRPFFHHLTYL 551
>TIGR_CMR|SO_0601 [details] [associations]
symbol:SO_0601 "DNA mismatch repair protein MutL"
species:211586 "Shewanella oneidensis MR-1" [GO:0006298 "mismatch
repair" evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
HAMAP:MF_00149 InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0006298
EMBL:AE014299 GenomeReviews:AE014299_GR Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 eggNOG:COG0323 HSSP:P23367
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585 KO:K03572
ProtClustDB:PRK00095 HOGENOM:HOG000256551 RefSeq:NP_716234.1
ProteinModelPortal:Q8EJ70 SMR:Q8EJ70 GeneID:1168468
KEGG:son:SO_0601 PATRIC:23520892 OMA:FTHIDEW Uniprot:Q8EJ70
Length = 631
Score = 129 (50.5 bits), Expect = 1.0e-09, Sum P(3) = 1.0e-09
Identities = 26/54 (48%), Positives = 40/54 (74%)
Query: 19 VVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGI 72
+ ++I AG+V++ +S VKELVENSLDAGA+ I+I + + G + ++ DNG GI
Sbjct: 10 LANQIAAGEVVERPASVVKELVENSLDAGASRIDIEIDKGGSKLIKIRDNGSGI 63
Score = 96 (38.9 bits), Expect = 1.0e-09, Sum P(3) = 1.0e-09
Identities = 40/158 (25%), Positives = 64/158 (40%)
Query: 89 ALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAI-CKSDSC 147
AL+ + F T+ GK V++ + V G + E + + C+ D
Sbjct: 179 ALVRGDIHFTLTHN-GKTVRNY-RPAMNEPQYLQRLTQVAGRPFAD--EALRVECQHDDL 234
Query: 148 KVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQYPIAIMNFIV 207
++ G+L P L D YF+VN R V V+ V + + + P ++ +
Sbjct: 235 RLSGYLQSPWSTV---LTDTHYFYVNGRLVRDRLVNHAVRQAFAQKAEVEQPGYVLMLDI 291
Query: 208 PTRACDVNVTPDKRKVFFSDECS----ILHALREGLQE 241
DVNV P K +V F IL AL+ L+E
Sbjct: 292 DPHQVDVNVHPAKHEVRFHQSRYVHDYILQALQSALEE 329
Score = 45 (20.9 bits), Expect = 1.0e-09, Sum P(3) = 1.0e-09
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 656 STVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSL 694
+T L QPLL P+ + + + H +IR+ G L
Sbjct: 499 ATGLIGQPLLMPVSVAADTDWSSLLDEHATLIRQLGLEL 537
>UNIPROTKB|P74925 [details] [associations]
symbol:mutL "DNA mismatch repair protein MutL"
species:243274 "Thermotoga maritima MSB8" [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] HAMAP:MF_00149
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014763 InterPro:IPR014790 InterPro:IPR020667
Pfam:PF01119 Pfam:PF08676 SMART:SM00387 SMART:SM00853
Prosite:PS00058 GO:GO:0005524 GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:AE000512 GenomeReviews:AE000512_GR
eggNOG:COG0323 InterPro:IPR014762 PANTHER:PTHR10073
TIGRFAMs:TIGR00585 GO:GO:0032300 KO:K03572 EMBL:U71053 PIR:H72427
RefSeq:NP_227838.1 ProteinModelPortal:P74925 GeneID:896837
KEGG:tma:TM0022 PATRIC:23934884 OMA:IQTLGFR ProtClustDB:CLSK874928
Uniprot:P74925
Length = 510
Score = 120 (47.3 bits), Expect = 1.2e-09, Sum P(4) = 1.2e-09
Identities = 26/62 (41%), Positives = 41/62 (66%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ + + +V +I AG+VI + S +KELVENSLDA A I + ++ G+ +V DNG G
Sbjct: 3 IKRLPESLVRKIAAGEVIHNPSFVLKELVENSLDAQADRIVVEIENGGKNMVRVSDNGIG 62
Query: 72 IS 73
++
Sbjct: 63 MT 64
Score = 93 (37.8 bits), Expect = 1.2e-09, Sum P(4) = 1.2e-09
Identities = 26/93 (27%), Positives = 47/93 (50%)
Query: 148 KVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQYPIAIMNFIV 207
+++G +S G+ YF+VN R V ++ +++ ++Y R YP+A++ V
Sbjct: 230 RIKGIVSSREVTRSSRTGE--YFYVNGRFVVSEELHEVLMKVYD-LPKRSYPVAVLFIEV 286
Query: 208 PTRACDVNVTPDKRKVFFSDECSILHALREGLQ 240
DVN+ P K V F +E + +L E L+
Sbjct: 287 NPEELDVNIHPSKIVVKFLNEEKVKKSLEETLK 319
Score = 47 (21.6 bits), Expect = 1.2e-09, Sum P(4) = 1.2e-09
Identities = 11/51 (21%), Positives = 26/51 (50%)
Query: 627 FIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEE 677
+ + +++ L VD HA E+ +E + ++ + R + + L+ EE+
Sbjct: 357 YAVVEVEDGLLFVDLHALHERTIYEEILSKKSWGKRRVKRNITVVLSREEK 407
Score = 45 (20.9 bits), Expect = 1.2e-09, Sum P(4) = 1.2e-09
Identities = 12/47 (25%), Positives = 21/47 (44%)
Query: 756 RVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRP 802
+++ +A AC+ + G+ K+L+ CPHGRP
Sbjct: 450 KLKERIALAACKLATKSGE-FDEEIASKLLDVFFKKRFE-RCPHGRP 494
Score = 45 (20.9 bits), Expect = 8.2e-09, Sum P(3) = 8.2e-09
Identities = 37/188 (19%), Positives = 74/188 (39%)
Query: 365 PSRVMAKNITEDGESDSRSRCIQSSLNK--FVTVSKRKYESIARPLTEMPLLRNQSLHCQ 422
PS+++ K + E+ S ++ +L + + +V+ + S A + E P R
Sbjct: 297 PSKIVVKFLNEEKVKKSLEETLKRNLARKWYRSVAYEEISSRALSVAEAPSHR----WFL 352
Query: 423 MKKSNSDMDAVDTRSPVRRHLVDDIAKLNKIEPFKCNKADKVSKEIENILSSEGNTN-EK 481
+K + ++ D V H + + +I K +V + I +LS E E+
Sbjct: 353 VKGKYAVVEVEDGLLFVDLHALHERTIYEEILSKKSWGKRRVKRNITVVLSREEKQKLEE 412
Query: 482 PREELVTQEKATPLLNVPSIVSSS------NDL---KKNSEDLSVAASHLQFSGSILDAP 532
+E A ++ +P ++ D +K E +++AA L D
Sbjct: 413 YGFSFQGEEGALKVIEIPEFLTEDVVEEFFRDFPVDEKLKERIALAACKLATKSGEFDEE 472
Query: 533 VPSSSLDI 540
+ S LD+
Sbjct: 473 IASKLLDV 480
>UNIPROTKB|E2QZJ2 [details] [associations]
symbol:MLH3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0019237 "centromeric DNA binding"
evidence=IEA] [GO:0008104 "protein localization" evidence=IEA]
[GO:0007144 "female meiosis I" evidence=IEA] [GO:0007140 "male
meiosis" evidence=IEA] [GO:0007130 "synaptonemal complex assembly"
evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0005712 "chiasma" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0001673 "male germ cell nucleus" evidence=IEA]
[GO:0000795 "synaptonemal complex" evidence=IEA] [GO:0030983
"mismatched DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
GO:GO:0008104 GO:GO:0003682 GO:GO:0006298 GO:GO:0019237
GO:GO:0001673 GO:GO:0007140 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007130 GO:GO:0007144
GO:GO:0000795 GO:GO:0005712 InterPro:IPR014762 PANTHER:PTHR10073
OMA:HGAIKFN GeneTree:ENSGT00550000074903 EMBL:AAEX03005855
Ensembl:ENSCAFT00000026947 Uniprot:E2QZJ2
Length = 1424
Score = 134 (52.2 bits), Expect = 4.2e-09, Sum P(4) = 4.2e-09
Identities = 55/205 (26%), Positives = 90/205 (43%)
Query: 636 LFIVDQHAADEKYNFERLSQSTVLNQQP-------LLR-----PLKLDLTPEEEVVASMH 683
L +VDQHAA E+ E+L + QQP LL PLK+ +T E+ + +
Sbjct: 1189 LVLVDQHAAHERVRLEQLITDSYEKQQPQGSGRKKLLSSTVSPPLKIRVTEEQRRLLRCY 1248
Query: 684 MDIIRKNGFSL----EEDPHALAGLRFRLKAVPF-SKKITFGVEDV-KDLISTLADNQGE 737
+ G + D L G + L + + ++ G V ++++ Q E
Sbjct: 1249 HKNLEDLGLEILFPDTNDSLVLVG-KVPLCFIEREANELRRGRSPVTRNIVEEFIREQVE 1307
Query: 738 CSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNC 797
++ + P V+ +LAS+AC +I D L R E +++E L+ P+ C
Sbjct: 1308 --LLQT--TGGIQRTLPLTVQKVLASQACHGAIKFNDGLSREESCRLIEALSWCQLPFQC 1363
Query: 798 PHGRPTMRHLVDLTTI--RKNIDEN 820
HGRP+M L D+ + K I N
Sbjct: 1364 AHGRPSMLPLADIDHLGQEKQIKPN 1388
Score = 75 (31.5 bits), Expect = 4.2e-09, Sum P(4) = 4.2e-09
Identities = 19/55 (34%), Positives = 31/55 (56%)
Query: 22 RICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNN 76
R+ +G I L V+ELV NS+DA A + + + + QV+DNG G+ ++
Sbjct: 12 RLRSGLAICSLGQCVEELVLNSIDAEAKCVAVRVNMETFQ-VQVIDNGFGMGSDD 65
Score = 59 (25.8 bits), Expect = 4.2e-09, Sum P(4) = 4.2e-09
Identities = 56/280 (20%), Positives = 115/280 (41%)
Query: 193 ANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASYSV 252
AN + I ++N DV + P K + F D ++L ++E ++ +
Sbjct: 298 ANPELHGIYVINMQCQFCEYDVCMEPAKTLIEFQDWDTVLVCIQEAVKMFLKKEKLFMEL 357
Query: 253 NKVEQLIEPEKSGPSSGAESCMFLEQLSPDGNGCIEILNEQQISKGNTPKTVEVDTLHSD 312
+ E + E + S S + + D G + +N Q+ + + E+ + S
Sbjct: 358 SG-EDIKEFSEDNDFS-LFSATLQKHVPSDEKG--DQVNFQEACN-SISDSYEMFNIQSK 412
Query: 313 ALEGLVHSSNE-NGKGNFTLKAHDDKSADRLSKFNCMKLIGPHN------VPTEENCPSP 365
A++ N N + + L+ K+ D +N + H+ + T+++ S
Sbjct: 413 AVKRKATIENRRNTENSRDLEGIRKKTNDSFL-YNYESVDPSHSKVMESSLQTKDSSCSE 471
Query: 366 SRVMAKN---ITEDGESDSRSR-CIQSSLNKFVTVSKRKYESIARPLTEMPLLRNQSLHC 421
S ++ + ++E GE++ + C++ LN +S+ E A P Q+ +C
Sbjct: 472 SGILEQQTAEVSESGENEKHKKLCLE--LNSSENLSRIHSEMFASPF--------QTSYC 521
Query: 422 QMKKSNSDMDAVDTRSPVRRHLVDDIAK----LNKIEPFK 457
+KS D++ +T + V + I K N++E FK
Sbjct: 522 -FEKSGDDLEIQNTNTIVNG-MAASILKNNGIRNQLERFK 559
Score = 52 (23.4 bits), Expect = 4.2e-09, Sum P(4) = 4.2e-09
Identities = 22/106 (20%), Positives = 46/106 (43%)
Query: 86 QAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSD 145
+A +L+ + F N S+VL+ + + ++G+ L + K
Sbjct: 176 EALSLMHPSISFSLRNDVSG---SMVLQVPKTKDVCSRFCQIYGLGKSQKLREIKF-KYK 231
Query: 146 SCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYK 191
++ G++S + +N+ Q+ FVN R V K+ K ++ L +
Sbjct: 232 EFELSGYISSEAHYN-KNM---QFLFVNKRLVLRTKLHKFIDFLLR 273
Score = 49 (22.3 bits), Expect = 4.0e-08, Sum P(4) = 4.0e-08
Identities = 29/128 (22%), Positives = 56/128 (43%)
Query: 398 KRKYESIARPLTEMPLLRNQSLHCQMKKSNSDMDAVDTRSPVRRHLVDDIAKLNKIEPFK 457
K+ +S+A L+ M ++ +M ++ D S + H + L+ E K
Sbjct: 871 KQSPKSLASKLSRMKGCEGETQAVEMMSHFDELPQSD--SSRKDHDLCSGLTLDSCELTK 928
Query: 458 CNKADKVSKEIENILSSEGNTNEKPREELVTQEKATPLLNV----PSIV--SSSNDLKKN 511
NK +K +I +L S N ++ + K+T +V P ++ S D+ K+
Sbjct: 929 -NKYEKTESDIIPVLDSVTQDNSFNKDSETSSNKSTTENSVIPETPLVLPCDRSKDVSKD 987
Query: 512 SEDLSVAA 519
S D+ +A+
Sbjct: 988 S-DVLIAS 994
Score = 47 (21.6 bits), Expect = 6.3e-08, Sum P(4) = 6.3e-08
Identities = 23/111 (20%), Positives = 49/111 (44%)
Query: 369 MAKNITEDGESDSRSR----CIQSSLNKFVTVSKRKYESIARPLTEMPLLRNQSLHCQMK 424
M + E +SDS + C +L+ ++K KYE + +P+L + + Q
Sbjct: 896 MMSHFDELPQSDSSRKDHDLCSGLTLDS-CELTKNKYEKTESDI--IPVLDSVT---QDN 949
Query: 425 KSNSDMDAVDTRSPVRRHLVDDIAKLNKIEPFKCNKADKVSKEIENILSSE 475
N D + +S ++ + + C+++ VSK+ + +++SE
Sbjct: 950 SFNKDSETSSNKSTTENSVIPETPLV-----LPCDRSKDVSKDSDVLIASE 995
>DICTYBASE|DDB_G0287393 [details] [associations]
symbol:mlh1 "MutL DNA mismatch repair protein"
species:44689 "Dictyostelium discoideum" [GO:0030983 "mismatched
DNA binding" evidence=IEA] [GO:0006298 "mismatch repair"
evidence=IEA;ISS;IBA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0032407 "MutSalpha
complex binding" evidence=ISS;IBA] [GO:0016887 "ATPase activity"
evidence=ISS;IBA] [GO:0006200 "ATP catabolic process"
evidence=ISS;IBA] [GO:0005694 "chromosome" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0032390 "MutLbeta
complex" evidence=IBA] [GO:0032389 "MutLalpha complex"
evidence=IBA] [GO:0032300 "mismatch repair complex" evidence=IBA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IBA]
[GO:0005712 "chiasma" evidence=IBA] [GO:0003697 "single-stranded
DNA binding" evidence=IBA] [GO:0000795 "synaptonemal complex"
evidence=IBA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR011186 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 dictyBase:DDB_G0287393 Prosite:PS00058
GO:GO:0005524 GenomeReviews:CM000154_GR GO:GO:0016887 GO:GO:0006298
GO:GO:0003697 EMBL:AAFI02000100 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407
GO:GO:0000795 eggNOG:COG0323 RefSeq:XP_637285.1 HSSP:P23367
ProteinModelPortal:Q54KD8 STRING:Q54KD8 EnsemblProtists:DDB0232418
GeneID:8626116 KEGG:ddi:DDB_G0287393 KO:K08734 OMA:SIQVVVK
ProtClustDB:CLSZ2846671 GO:GO:0005712 GO:GO:0032389 GO:GO:0032390
InterPro:IPR014762 PANTHER:PTHR10073 PANTHER:PTHR10073:SF11
TIGRFAMs:TIGR00585 Uniprot:Q54KD8
Length = 884
Score = 137 (53.3 bits), Expect = 4.2e-09, Sum P(3) = 4.2e-09
Identities = 28/61 (45%), Positives = 45/61 (73%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I + + VV++I AG+VI+ S+A+KEL+EN LDA +T+I + +K+ G ++ Q+ DNG G
Sbjct: 63 IHRLTQEVVNKISAGEVIQRPSNALKELLENCLDAKSTTITVTVKDGGMKFLQIQDNGSG 122
Query: 72 I 72
I
Sbjct: 123 I 123
Score = 83 (34.3 bits), Expect = 4.2e-09, Sum P(3) = 4.2e-09
Identities = 28/107 (26%), Positives = 51/107 (47%)
Query: 149 VEGFLSKPGQGSGR-NLGDRQYFFVNDRPVDLPKVSKLVNELY-KGANSRQYPIAIMNFI 206
++GF S S + N F+N R VD + + ++Y K +P + +
Sbjct: 330 MKGFFSSTNYNSKKINF----ILFINGRLVDSKNLKTGLEQVYSKYLPKGTHPFMFIRLL 385
Query: 207 VPTRACDVNVTPDKRKVFFSDECSILHALREGL-QEI-YSPNNASYS 251
VP + DVN+ P K +V E I+ +++ + QE+ S N+ ++S
Sbjct: 386 VPPKNIDVNIHPTKSEVKILHEEQIIEFIQQKVDQELSISSNSKTFS 432
Score = 49 (22.3 bits), Expect = 4.2e-09, Sum P(3) = 4.2e-09
Identities = 20/70 (28%), Positives = 30/70 (42%)
Query: 449 KLNKIEPFKCNKADKVSKEIENILSSEGNTNEKP-REELVTQEKATPLLNVPSIVSSS-- 505
K N F N ++ ++I+N LSS K R++ T T + S+S
Sbjct: 537 KFNDNLIFNDNSENEAPRDIDNPLSSVTPIKSKEQRQQQSTTTTTTTTTTTATTKSNSPA 596
Query: 506 --NDLKKNSE 513
ND+KK E
Sbjct: 597 SKNDIKKLQE 606
>FB|FBgn0011659 [details] [associations]
symbol:Mlh1 "Mlh1" species:7227 "Drosophila melanogaster"
[GO:0006298 "mismatch repair" evidence=ISS;IBA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0000795 "synaptonemal complex" evidence=IBA]
[GO:0016887 "ATPase activity" evidence=IBA] [GO:0007131 "reciprocal
meiotic recombination" evidence=IBA] [GO:0032300 "mismatch repair
complex" evidence=IBA] [GO:0005712 "chiasma" evidence=IBA]
[GO:0032390 "MutLbeta complex" evidence=IBA] [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0032407 "MutSalpha
complex binding" evidence=IBA] [GO:0032389 "MutLalpha complex"
evidence=IBA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR011186 InterPro:IPR013507 InterPro:IPR014763
Pfam:PF01119 SMART:SM00387 Prosite:PS00058 EMBL:AE013599
GO:GO:0005524 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 GO:GO:0000795 eggNOG:COG0323 KO:K08734 OMA:SIQVVVK
GO:GO:0005712 GO:GO:0032389 GO:GO:0032390 InterPro:IPR014762
PANTHER:PTHR10073 PANTHER:PTHR10073:SF11 TIGRFAMs:TIGR00585
CTD:4292 GeneTree:ENSGT00550000074923 RefSeq:NP_477022.1
UniGene:Dm.26257 ProteinModelPortal:A1Z7C1 SMR:A1Z7C1 STRING:A1Z7C1
PRIDE:A1Z7C1 EnsemblMetazoa:FBtr0088790 GeneID:35796
KEGG:dme:Dmel_CG11482 UCSC:CG11482-RA FlyBase:FBgn0011659
InParanoid:A1Z7C1 OrthoDB:EOG470RZ8 PhylomeDB:A1Z7C1
GenomeRNAi:35796 NextBio:795251 Bgee:A1Z7C1 Uniprot:A1Z7C1
Length = 664
Score = 143 (55.4 bits), Expect = 5.0e-09, Sum P(4) = 5.0e-09
Identities = 33/86 (38%), Positives = 56/86 (65%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR +++ VV+RI AG++I+ ++A+KEL+ENSLDA +T I++ +K G + Q+ DNG G
Sbjct: 10 IRKLDEVVVNRIAAGEIIQRPANALKELLENSLDAQSTHIQVQVKAGGLKLLQIQDNGTG 69
Query: 72 ISPNNFKVRAVFLCQAYALIAKGVRF 97
I + + +C+ + +K RF
Sbjct: 70 IRREDLAI----VCERFTT-SKLTRF 90
Score = 86 (35.3 bits), Expect = 5.0e-09, Sum P(4) = 5.0e-09
Identities = 35/145 (24%), Positives = 66/145 (45%)
Query: 112 LKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEG-FLSKPGQGSGRNLGDRQYF 170
L+T +SS +NI ++G I L + + + K E L S + +
Sbjct: 206 LRTPVASSRSENIRIIYGAAISKELLEFSH-RDEVYKFEAECLITQVNYSAKKC--QMLL 262
Query: 171 FVNDRPVDLPKVSKLVNELYKGANSR-QYPIAIMNFIVPTRACDVNVTPDKRKVFFSDEC 229
F+N R V+ + V+ +Y R +P M+ +P + DVNV P K +V F +
Sbjct: 263 FINQRLVESTALRTSVDSIYATYLPRGHHPFVYMSLTLPPQNLDVNVHPTKHEVHFLYQE 322
Query: 230 SILHALREGLQEIYSPNNASYSVNK 254
I+ ++++ ++ +NA+ + K
Sbjct: 323 EIVDSIKQQVEARLLGSNATRTFYK 347
Score = 37 (18.1 bits), Expect = 5.0e-09, Sum P(4) = 5.0e-09
Identities = 10/28 (35%), Positives = 13/28 (46%)
Query: 648 YNFERLSQSTVLNQQPLLRPLKLDLTPE 675
Y F+ S+ T+ PL L L L E
Sbjct: 490 YEFQNCSEITISPPLPLKELLILSLESE 517
Score = 37 (18.1 bits), Expect = 5.0e-09, Sum P(4) = 5.0e-09
Identities = 20/78 (25%), Positives = 34/78 (43%)
Query: 488 TQEKATPLLNVPSIVSSSNDLKKNSEDLSVAASHLQFSGSILDAPVPSSSLDICSTLQFS 547
T++K L P + S S +S++ AS L + A S + + S L
Sbjct: 380 TEQKLDKFL-APLVKSDSGVSSSSSQE----ASRLPEESFRVTAAKKSREVRLSSVL--- 431
Query: 548 IQDLRKRRQQRLSIMQSS 565
D+RKR +++ S+ S
Sbjct: 432 --DMRKRVERQCSVQLRS 447
>TIGR_CMR|CPS_0323 [details] [associations]
symbol:CPS_0323 "DNA mismatch repair protein MutL"
species:167879 "Colwellia psychrerythraea 34H" [GO:0006298
"mismatch repair" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] HAMAP:MF_00149 InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0006298
EMBL:CP000083 GenomeReviews:CP000083_GR Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 eggNOG:COG0323
InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585 KO:K03572
RefSeq:YP_267089.1 ProteinModelPortal:Q48A24 SMR:Q48A24
STRING:Q48A24 GeneID:3521200 KEGG:cps:CPS_0323 PATRIC:21464033
HOGENOM:HOG000256551 OMA:RMASTHA BioCyc:CPSY167879:GI48-426-MONOMER
Uniprot:Q48A24
Length = 652
Score = 131 (51.2 bits), Expect = 5.8e-09, Sum P(3) = 5.8e-09
Identities = 28/62 (45%), Positives = 43/62 (69%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
TI + + ++I AG+V++ +S +KEL+ENSLDAGATSI I + + G + ++ DNG
Sbjct: 2 TIAILPARLANQIAAGEVVERPASVIKELIENSLDAGATSIHIDVDKGGIKKIKITDNGH 61
Query: 71 GI 72
GI
Sbjct: 62 GI 63
Score = 87 (35.7 bits), Expect = 5.8e-09, Sum P(3) = 5.8e-09
Identities = 34/133 (25%), Positives = 58/133 (43%)
Query: 95 VRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMN-IYNCLEPVAICKSDSCKVEGFL 153
V F T+ G V+ + + + +K + V G I + +E C D+ + G+L
Sbjct: 185 VSFSLTHN-GNTVRQYRMASTHAQCIK-RVAMVCGPKFIEHAVE--VDCPHDNMTLSGWL 240
Query: 154 SKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQ-YPIAIMNFIVPTRAC 212
+KP +N D Y +VN R + ++ + + Y YP ++ + R
Sbjct: 241 AKPSFSRSQN--DLCYSYVNGRMMRDKLINHAIRQAYADLLPPDTYPAFVLFLQLDHREV 298
Query: 213 DVNVTPDKRKVFF 225
DVNV P K +V F
Sbjct: 299 DVNVHPSKHEVRF 311
Score = 45 (20.9 bits), Expect = 5.8e-09, Sum P(3) = 5.8e-09
Identities = 20/63 (31%), Positives = 27/63 (42%)
Query: 611 KEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKL 670
K F + + + NL IG L L D+ AD + L+QQ LL + L
Sbjct: 584 KRSFTEGEALCETNLHQSIG-LAMVLAEYDETQADILLRLTKKLFHEQLSQQLLLNSIPL 642
Query: 671 DLT 673
DLT
Sbjct: 643 DLT 645
Score = 38 (18.4 bits), Expect = 2.9e-08, Sum P(3) = 2.9e-08
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 659 LNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNG 691
L QPLL P+ L L+ ++ +I+ G
Sbjct: 513 LVSQPLLLPVILSLSEQQLSFVLAEQEILSNAG 545
>UNIPROTKB|F1S2R6 [details] [associations]
symbol:MLH3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0019237 "centromeric DNA binding" evidence=IEA]
[GO:0008104 "protein localization" evidence=IEA] [GO:0007144
"female meiosis I" evidence=IEA] [GO:0007140 "male meiosis"
evidence=IEA] [GO:0007130 "synaptonemal complex assembly"
evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0005712 "chiasma" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0001673 "male germ cell nucleus" evidence=IEA]
[GO:0000795 "synaptonemal complex" evidence=IEA] [GO:0030983
"mismatched DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014790 Pfam:PF01119 Pfam:PF02518
Pfam:PF08676 SMART:SM00387 SMART:SM00853 Prosite:PS00058
GO:GO:0005524 GO:GO:0008104 GO:GO:0003682 GO:GO:0006298
GO:GO:0019237 GO:GO:0001673 GO:GO:0007140 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007130 GO:GO:0007144
GO:GO:0000795 GO:GO:0005712 InterPro:IPR014762 PANTHER:PTHR10073
OMA:HGAIKFN GeneTree:ENSGT00550000074903 EMBL:CT737372
Ensembl:ENSSSCT00000002644 Uniprot:F1S2R6
Length = 1427
Score = 115 (45.5 bits), Expect = 1.0e-08, Sum P(4) = 1.0e-08
Identities = 53/206 (25%), Positives = 89/206 (43%)
Query: 636 LFIVDQHAADEKYNFERL--------SQSTVLNQQPLLR-----PLKLDLTPEEEVVASM 682
L +VDQHAA E+ E+L Q+ ++ LL PL++ +T E+ +
Sbjct: 1191 LVLVDQHAAHERIRLEQLIAVDSYEKQQAQGSGRKKLLSSTVNPPLEIPVTEEQRRLLRC 1250
Query: 683 HMDIIRKNGFSL----EEDPHALAGLRFRLKAVPF-SKKITFGVEDV-KDLISTLADNQG 736
+ + G + D L G + L V + ++ G V K ++ Q
Sbjct: 1251 YHKNLEDLGLEIIFPDTSDRLVLVG-KVPLCFVEREANELRRGRSTVTKSIVEEFIREQV 1309
Query: 737 ECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWN 796
E ++ + P V+ +LAS+AC +I D+L E +++E L+ P+
Sbjct: 1310 E--LLQT--TGGIQGTLPLTVQKVLASQACHGAIKFNDSLSLEESCRLIEALSWCQLPFQ 1365
Query: 797 CPHGRPTMRHLVDLTTIR--KNIDEN 820
C HGRP+M L D+ + K I N
Sbjct: 1366 CAHGRPSMLPLADVDHLEQEKQIKPN 1391
Score = 73 (30.8 bits), Expect = 1.0e-08, Sum P(4) = 1.0e-08
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ ++ V R+ +G I L V+EL NS+DA A + + + + QV+DNG G
Sbjct: 2 IKCLSVEVQARLRSGLAICSLGQCVEELALNSIDAEAKCVAVRVNMETFQ-VQVIDNGIG 60
Query: 72 I 72
+
Sbjct: 61 M 61
Score = 72 (30.4 bits), Expect = 1.0e-08, Sum P(4) = 1.0e-08
Identities = 77/381 (20%), Positives = 148/381 (38%)
Query: 194 NSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASYSVN 253
N + I ++N DV + P K + F + ++L ++EG++ ++
Sbjct: 299 NPELHGIYVINMQCQFCEYDVCLEPAKTLIEFQNWDTLLVCIQEGVKMFLKKEKLFVELS 358
Query: 254 KVEQLIEPEKSGPSSGAESCMFLEQLSPDGNGCIEILNEQQISKGNTPKTVEVDTLHSDA 313
E + E + S S +Q+S D + +N Q+ N + E+ L S A
Sbjct: 359 N-EDIKEFSEDNDFS-LFSTTLQKQVSSDEK--YDQVNFQEACN-NILDSYEMFNLQSKA 413
Query: 314 LEGLVHSSNENGKGNFTLKAHDDKSADR-LSKFNCMKL----IGPHNVPTEENCPSPSRV 368
++ N N + + +A K+ D L F L + ++ E++ S SR+
Sbjct: 414 VKRKATVENINTQNSRDSEAIRKKTNDSFLYTFESSGLAHSKMTESSLQNEDSACSESRI 473
Query: 369 MAKNITE-----DGESDSRSRCIQSSLNKFVTVSKRKYESIARPLTEMPLLRNQSLHCQM 423
+ + E + E D +S C++ LN E A P Q+ H +
Sbjct: 474 LEQETVEASEPGENEKDKKS-CLE--LNSSENPCGTSSEMFASPF--------QTHHFER 522
Query: 424 KKSNSDMDAVDTRS-PVRRHLVDDIAKLNKIEPFK-CNKADKVSKEIENILSSEGNTNEK 481
NS++ V T + +++ N++E FK + + E +L + G ++
Sbjct: 523 SGDNSEIQKVSTTANDTNANILKSNRIQNQLERFKDATEMECQPLPFETLLGANGTPRKE 582
Query: 482 PREELVTQEKATPLLNVPS-----IVSSS--NDLKKNSEDLSVAASHLQFSGSILDAPVP 534
EE + +NV S + S+ + +N + S HL F + PV
Sbjct: 583 --EERKKEPSNCGRINVFSYGQVNLCSTGFITHVVQNEQTKSTKTEHL-FKNRVQPGPVS 639
Query: 535 SSSL---DICSTLQF-SIQDL 551
+ C +++ +I+DL
Sbjct: 640 AKETFGSRTCHSVEIPNIKDL 660
Score = 57 (25.1 bits), Expect = 1.0e-08, Sum P(4) = 1.0e-08
Identities = 24/106 (22%), Positives = 47/106 (44%)
Query: 86 QAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSD 145
+A +L+ V F N S+VL+ + + ++G+ L + K
Sbjct: 176 EALSLMHPSVSFSLRNDVSG---SMVLQLPKTKDICSRFCQIYGLGKSQKLREINF-KYK 231
Query: 146 SCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYK 191
++ GF+S + +N+ Q+ FVN R + K+ KL++ L +
Sbjct: 232 EFELNGFISAEAHYN-KNM---QFLFVNKRLILRTKLHKLIDFLLR 273
Score = 49 (22.3 bits), Expect = 1.8e-06, Sum P(4) = 1.8e-06
Identities = 9/25 (36%), Positives = 15/25 (60%)
Query: 364 SPSRVMAKNITEDGESDSRSRCIQS 388
SP R++ ++ ED +D C+QS
Sbjct: 1002 SPKRMLMSHV-EDSTADQSGTCVQS 1025
Score = 48 (22.0 bits), Expect = 2.3e-06, Sum P(4) = 2.3e-06
Identities = 28/109 (25%), Positives = 46/109 (42%)
Query: 422 QMKKSNSDMDA-VDTRSPVRRHLVDDIAKLNKIEPFK--CNKA-DKVSKEIENILSSEGN 477
Q+ S+ D + + P+ + ++L +E FK K + +S E+E + E
Sbjct: 723 QVSNSSKRTDKLIGSTKPIAHKKLSLSSQLGSLEKFKRQYGKVKNPLSTEVEENNTLEIT 782
Query: 478 TNEKPREELVTQEKATPLLNVPSIVSSSNDLKKNSEDLSVA-ASHLQFS 525
TN P+ E K L+ I + LK N S ASH+ +S
Sbjct: 783 TNLSPQGEPDIPWKDENHLDNSGICKITT-LKHNDSRSSCQPASHMFYS 830
Score = 47 (21.6 bits), Expect = 2.8e-06, Sum P(4) = 2.8e-06
Identities = 15/50 (30%), Positives = 24/50 (48%)
Query: 202 IMNFIVPTR----ACDVNVTPDKRKVFFSDEC---SILHALREGLQEIYS 244
+ F+ PT AC ++T V +E SIL ++ E LQ ++S
Sbjct: 1066 LSTFVAPTEDVRAACTKDLTTMAVDVLLENEIGVDSILQSIYESLQSLFS 1115
Score = 37 (18.1 bits), Expect = 2.6e-05, Sum P(4) = 2.6e-05
Identities = 10/35 (28%), Positives = 15/35 (42%)
Query: 449 KLNKIEPFKCNKADKVSKEIENILSSEGNTNEKPR 483
KL+K+ F K + K S + N +PR
Sbjct: 263 KLHKLIDFLLRKESIICKPKNGSASRQMNCGPRPR 297
>UNIPROTKB|Q75F21 [details] [associations]
symbol:AAL093C "AAL093Cp" species:284811 "Ashbya gossypii
ATCC 10895" [GO:0000795 "synaptonemal complex" evidence=IBA]
[GO:0003697 "single-stranded DNA binding" evidence=IBA] [GO:0005712
"chiasma" evidence=IBA] [GO:0006200 "ATP catabolic process"
evidence=IBA] [GO:0006298 "mismatch repair" evidence=IBA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IBA]
[GO:0016887 "ATPase activity" evidence=IBA] [GO:0032300 "mismatch
repair complex" evidence=IBA] [GO:0032390 "MutLbeta complex"
evidence=IBA] [GO:0032407 "MutSalpha complex binding" evidence=IBA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR014790
Pfam:PF08676 SMART:SM00387 SMART:SM00853 Prosite:PS00058
GO:GO:0005524 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 InterPro:IPR020568
SUPFAM:SSF54211 EMBL:AE016814 GenomeReviews:AE016814_GR
GO:GO:0007131 GO:GO:0032407 GO:GO:0000795 GO:GO:0005712
GO:GO:0032390 InterPro:IPR014762 PANTHER:PTHR10073 KO:K08739
OMA:KACRSAI OrthoDB:EOG46X2HJ RefSeq:NP_982449.1
ProteinModelPortal:Q75F21 STRING:Q75F21 EnsemblFungi:AAS50273
GeneID:4618574 KEGG:ago:AGOS_AAL093C PhylomeDB:Q75F21
Uniprot:Q75F21
Length = 734
Score = 116 (45.9 bits), Expect = 2.0e-08, Sum P(4) = 2.0e-08
Identities = 23/57 (40%), Positives = 34/57 (59%)
Query: 754 PSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
P+ +L S+ACRS+IM GD L +E ++ L+ N P C HGRP++ + DL
Sbjct: 660 PTVFLEILNSKACRSAIMFGDKLNHDECLFLVRQLSTCNMPLRCAHGRPSVIPIADL 716
Score = 73 (30.8 bits), Expect = 2.0e-08, Sum P(4) = 2.0e-08
Identities = 35/109 (32%), Positives = 51/109 (46%)
Query: 619 VIGQFNLGFIIGKLDQD-------LFIVDQHAADEKYNFERLSQS---TVLNQQPLL--R 666
VI Q FI+ KL+ L I+DQHAADE+ E ++ T+L QP
Sbjct: 496 VINQIGNKFILLKLEPSRSRTTPLLLILDQHAADERVKLEAYTRDYLFTLLTAQPSFYTT 555
Query: 667 P--LKLDLTPEEEVVASMHMDIIRKNGFSL-EEDPHALAGLRFRLKAVP 712
P + +DLT E + + I GF + +D + G + LKA+P
Sbjct: 556 PCSIAMDLTHTEADILLHYKREIEFWGFEICYKDEYT--GPLY-LKAIP 601
Score = 71 (30.1 bits), Expect = 2.0e-08, Sum P(4) = 2.0e-08
Identities = 19/66 (28%), Positives = 38/66 (57%)
Query: 9 SPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEW-FQVVD 67
+P I + + V R+ + I + +AV+EL++NS+DA +E+++ + W V D
Sbjct: 6 APKIHRLEESVFLRLRSQLSIVSVGAAVRELMQNSVDACCGRLEVSVDL--DRWRVHVRD 63
Query: 68 NGCGIS 73
+G G++
Sbjct: 64 DGEGLN 69
Score = 41 (19.5 bits), Expect = 2.0e-08, Sum P(4) = 2.0e-08
Identities = 13/55 (23%), Positives = 26/55 (47%)
Query: 143 KSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQ 197
K +V+G +S G S D Q+ ++N R + + N+L++ A ++
Sbjct: 250 KYQDIEVQGVISTVGVPSK----DYQFIYINKRRYEDKRFIFGFNKLFRSARYKE 300
>UNIPROTKB|E2QZI8 [details] [associations]
symbol:MLH3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030983 "mismatched DNA binding"
evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR014790 Pfam:PF08676 SMART:SM00853
GO:GO:0005524 GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874
GO:GO:0030983 PANTHER:PTHR10073 GeneTree:ENSGT00550000074903
EMBL:AAEX03005855 Ensembl:ENSCAFT00000026951 Uniprot:E2QZI8
Length = 467
Score = 134 (52.2 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 55/205 (26%), Positives = 90/205 (43%)
Query: 636 LFIVDQHAADEKYNFERLSQSTVLNQQP-------LLR-----PLKLDLTPEEEVVASMH 683
L +VDQHAA E+ E+L + QQP LL PLK+ +T E+ + +
Sbjct: 232 LVLVDQHAAHERVRLEQLITDSYEKQQPQGSGRKKLLSSTVSPPLKIRVTEEQRRLLRCY 291
Query: 684 MDIIRKNGFSL----EEDPHALAGLRFRLKAVPF-SKKITFGVEDV-KDLISTLADNQGE 737
+ G + D L G + L + + ++ G V ++++ Q E
Sbjct: 292 HKNLEDLGLEILFPDTNDSLVLVG-KVPLCFIEREANELRRGRSPVTRNIVEEFIREQVE 350
Query: 738 CSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNC 797
++ + P V+ +LAS+AC +I D L R E +++E L+ P+ C
Sbjct: 351 --LLQT--TGGIQRTLPLTVQKVLASQACHGAIKFNDGLSREESCRLIEALSWCQLPFQC 406
Query: 798 PHGRPTMRHLVDLTTI--RKNIDEN 820
HGRP+M L D+ + K I N
Sbjct: 407 AHGRPSMLPLADIDHLGQEKQIKPN 431
Score = 75 (31.5 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 19/55 (34%), Positives = 31/55 (56%)
Query: 22 RICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNN 76
R+ +G I L V+ELV NS+DA A + + + + QV+DNG G+ ++
Sbjct: 12 RLRSGLAICSLGQCVEELVLNSIDAEAKCVAVRVNMETFQ-VQVIDNGFGMGSDD 65
>UNIPROTKB|C9J4L1 [details] [associations]
symbol:PMS1 "PMS1 protein homolog 1" species:9606 "Homo
sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030983
"mismatched DNA binding" evidence=IEA] [GO:0006298 "mismatch
repair" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
GO:GO:0005524 GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874
EMBL:AC013468 GO:GO:0030983 PANTHER:PTHR10073 EMBL:AC008122
HGNC:HGNC:9121 ChiTaRS:PMS1 IPI:IPI00917898
ProteinModelPortal:C9J4L1 SMR:C9J4L1 STRING:C9J4L1
Ensembl:ENST00000420421 ArrayExpress:C9J4L1 Bgee:C9J4L1
Uniprot:C9J4L1
Length = 73
Score = 138 (53.6 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 29/71 (40%), Positives = 45/71 (63%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
++ + V + + Q+I + S VKEL+ENSLDAGATS+++ L+ YG + +V DNG G
Sbjct: 1 MKQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSVDVKLENYGFDKIEVRDNGEG 60
Query: 72 ISPNNFKVRAV 82
I + V A+
Sbjct: 61 IKAVDAPVMAM 71
>UNIPROTKB|E9PC40 [details] [associations]
symbol:PMS1 "PMS1 protein homolog 1" species:9606 "Homo
sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006298
"mismatch repair" evidence=IEA] [GO:0030983 "mismatched DNA
binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
SMART:SM00387 Prosite:PS00058 GO:GO:0005524 GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 EMBL:AC013468 GO:GO:0030983
InterPro:IPR014762 PANTHER:PTHR10073 EMBL:AC008122 HGNC:HGNC:9121
ChiTaRS:PMS1 IPI:IPI00386764 ProteinModelPortal:E9PC40 SMR:E9PC40
Ensembl:ENST00000409985 UCSC:uc010zfz.1 ArrayExpress:E9PC40
Bgee:E9PC40 Uniprot:E9PC40
Length = 181
Score = 138 (53.6 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 29/71 (40%), Positives = 45/71 (63%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
++ + V + + Q+I + S VKEL+ENSLDAGATS+++ L+ YG + +V DNG G
Sbjct: 1 MKQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSVDVKLENYGFDKIEVRDNGEG 60
Query: 72 ISPNNFKVRAV 82
I + V A+
Sbjct: 61 IKAVDAPVMAM 71
>UNIPROTKB|F8W8L1 [details] [associations]
symbol:PMS1 "PMS1 protein homolog 1" species:9606 "Homo
sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006298
"mismatch repair" evidence=IEA] [GO:0030983 "mismatched DNA
binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
Pfam:PF02518 SMART:SM00387 Prosite:PS00058 GO:GO:0005524
GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874 EMBL:AC013468
GO:GO:0030983 InterPro:IPR014762 PANTHER:PTHR10073 EMBL:AC008122
HGNC:HGNC:9121 ChiTaRS:PMS1 IPI:IPI00917668
ProteinModelPortal:F8W8L1 SMR:F8W8L1 Ensembl:ENST00000342075
ArrayExpress:F8W8L1 Bgee:F8W8L1 Uniprot:F8W8L1
Length = 108
Score = 138 (53.6 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 29/71 (40%), Positives = 45/71 (63%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
++ + V + + Q+I + S VKEL+ENSLDAGATS+++ L+ YG + +V DNG G
Sbjct: 1 MKQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSVDVKLENYGFDKIEVRDNGEG 60
Query: 72 ISPNNFKVRAV 82
I + V A+
Sbjct: 61 IKAVDAPVMAM 71
>UNIPROTKB|Q5XG96 [details] [associations]
symbol:PMS1 "PMS1 protein homolog 1" species:9606 "Homo
sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006298
"mismatch repair" evidence=IEA] [GO:0030983 "mismatched DNA
binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
SMART:SM00387 Prosite:PS00058 GO:GO:0005524 GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 EMBL:AC013468 GO:GO:0030983
InterPro:IPR014762 PANTHER:PTHR10073 EMBL:AC008122
UniGene:Hs.111749 HGNC:HGNC:9121 ChiTaRS:PMS1 EMBL:BC084548
IPI:IPI00479899 SMR:Q5XG96 STRING:Q5XG96 Ensembl:ENST00000374826
HOGENOM:HOG000249052 HOVERGEN:HBG055685 Uniprot:Q5XG96
Length = 165
Score = 138 (53.6 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 29/71 (40%), Positives = 45/71 (63%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
++ + V + + Q+I + S VKEL+ENSLDAGATS+++ L+ YG + +V DNG G
Sbjct: 1 MKQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSVDVKLENYGFDKIEVRDNGEG 60
Query: 72 ISPNNFKVRAV 82
I + V A+
Sbjct: 61 IKAVDAPVMAM 71
>UNIPROTKB|Q7RE54 [details] [associations]
symbol:PY05214 "HMLH1 gene product-related" species:73239
"Plasmodium yoelii yoelii" [GO:0000795 "synaptonemal complex"
evidence=IBA] [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0005712 "chiasma" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032389
"MutLalpha complex" evidence=IBA] [GO:0032390 "MutLbeta complex"
evidence=IBA] [GO:0032407 "MutSalpha complex binding" evidence=IBA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR011186
InterPro:IPR013507 Pfam:PF01119 SMART:SM00387 Prosite:PS00058
GO:GO:0005524 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131
GO:GO:0032407 GO:GO:0000795 eggNOG:COG0323 HSSP:P23367 KO:K08734
GO:GO:0005712 GO:GO:0032389 GO:GO:0032390 InterPro:IPR014762
PANTHER:PTHR10073 PANTHER:PTHR10073:SF11 EMBL:AABL01001642
RefSeq:XP_725646.1 ProteinModelPortal:Q7RE54 STRING:Q7RE54
GeneID:3790985 KEGG:pyo:PY05214 EuPathDB:PlasmoDB:PY05214
Uniprot:Q7RE54
Length = 885
Score = 128 (50.1 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 29/77 (37%), Positives = 48/77 (62%)
Query: 3 VETPTNSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEW 62
+ + N I + K ++RI AG+VI +A+KELVENSLDA +T+I + L + G +
Sbjct: 9 INSEENERRIIKLCKEDINRIAAGEVIIRPCNALKELVENSLDANSTNISVQLNKGGLKS 68
Query: 63 FQVVDNGCGISPNNFKV 79
Q++D+G GI ++ +
Sbjct: 69 VQIIDDGDGIHKDDLYI 85
Score = 87 (35.7 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 48/214 (22%), Positives = 89/214 (41%)
Query: 118 SSLKDNIITVFGMNIYNCLEPVAICKSDSC--KVEGFLSKPGQGSGRNLGDRQYFFVNDR 175
++ K I ++G ++ L P+ + + K G +S P S ++ FF+NDR
Sbjct: 302 NNTKTIIQKIYGRSVSKELIPIFVNEKIPTFFKCYGLISGPSYNSKKS---SYIFFINDR 358
Query: 176 PVDLPKVSKLVNELYKGANSR-QYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHA 234
V+ + + Y + YP + + D+NV P K++V F
Sbjct: 359 LVESNILKRACENQYNNFLGKGNYPWVYLALRLKYDIVDINVHPTKKEVHF--------- 409
Query: 235 LREGLQEIYSPNNASYSVNKVEQLIEPEKSGPSSGAESCMFLEQLSPDGNGCIEILNEQQ 294
+Y A+ K+EQ+++ + S A + L+ G I+I E+Q
Sbjct: 410 -------LYQDEIATLISKKIEQVLKNINNMRSYNAPTVNLLQTKFDLNTGKIDIKKEKQ 462
Query: 295 I-SKG-NTPKTVEVDTLHSDA-LEGLVHSSNENG 325
S G +T + HS++ ++G S N++G
Sbjct: 463 TGSNGYSTGYSNGYSNSHSNSHIDGQRGSDNKSG 496
>UNIPROTKB|P23367 [details] [associations]
symbol:mutL species:83333 "Escherichia coli K-12"
[GO:0006298 "mismatch repair" evidence=IEA;IDA;IMP] [GO:0005524
"ATP binding" evidence=IEA;IDA] [GO:0032300 "mismatch repair
complex" evidence=IGI] [GO:0016887 "ATPase activity"
evidence=IMP;IDA] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0000018 "regulation of DNA recombination" evidence=IMP]
[GO:0030983 "mismatched DNA binding" evidence=IEA] [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] HAMAP:MF_00149 InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014763 InterPro:IPR014790
InterPro:IPR020667 Pfam:PF01119 Pfam:PF08676 SMART:SM00387
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 EMBL:U00096
EMBL:AP009048 GenomeReviews:AP009048_GR GenomeReviews:U00096_GR
GO:GO:0016887 GO:GO:0006298 GO:GO:0003697 EMBL:U14003
Gene3D:3.30.565.10 SUPFAM:SSF55874 EMBL:L19346 EMBL:Z11831
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0000018 eggNOG:COG0323
EMBL:M63655 InterPro:IPR014762 PANTHER:PTHR10073 TIGRFAMs:TIGR00585
GO:GO:0032300 KO:K03572 ProtClustDB:PRK00095 HOGENOM:HOG000256551
PIR:PH0853 RefSeq:NP_418591.1 RefSeq:YP_492312.1 PDB:1B62 PDB:1B63
PDB:1BKN PDB:1NHH PDB:1NHI PDB:1NHJ PDB:1X9Z PDBsum:1B62
PDBsum:1B63 PDBsum:1BKN PDBsum:1NHH PDBsum:1NHI PDBsum:1NHJ
PDBsum:1X9Z ProteinModelPortal:P23367 SMR:P23367 DIP:DIP-10285N
IntAct:P23367 MINT:MINT-1266937 PRIDE:P23367
EnsemblBacteria:EBESCT00000002603 EnsemblBacteria:EBESCT00000002604
EnsemblBacteria:EBESCT00000002605 EnsemblBacteria:EBESCT00000017847
GeneID:12934482 GeneID:948691 KEGG:ecj:Y75_p4056 KEGG:eco:b4170
PATRIC:32123913 EchoBASE:EB1258 EcoGene:EG11281 OMA:FSHIDEI
BioCyc:EcoCyc:EG11281-MONOMER BioCyc:ECOL316407:JW4128-MONOMER
BioCyc:MetaCyc:EG11281-MONOMER EvolutionaryTrace:P23367
Genevestigator:P23367 Uniprot:P23367
Length = 615
Score = 142 (55.0 bits), Expect = 3.9e-08, Sum P(3) = 3.9e-08
Identities = 28/54 (51%), Positives = 41/54 (75%)
Query: 19 VVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGI 72
+ ++I AG+V++ +S VKELVENSLDAGAT I+I ++ G + ++ DNGCGI
Sbjct: 10 LANQIAAGEVVERPASVVKELVENSLDAGATRIDIDIERGGAKLIRIRDNGCGI 63
Score = 59 (25.8 bits), Expect = 3.9e-08, Sum P(3) = 3.9e-08
Identities = 19/86 (22%), Positives = 40/86 (46%)
Query: 149 VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGA-NSRQYPIAIMNFIV 207
+ G+++ P + L + QY +VN R + ++ + + + + Q P ++ +
Sbjct: 236 LRGWVADPNHTTPA-LAEIQYCYVNGRMMRDRLINHAIRQACEDKLGADQQPAFVLYLEI 294
Query: 208 PTRACDVNVTPDKRKVFFSDECSILH 233
DVNV P K +V F + ++H
Sbjct: 295 DPHQVDVNVHPAKHEVRFH-QSRLVH 319
Score = 52 (23.4 bits), Expect = 3.9e-08, Sum P(3) = 3.9e-08
Identities = 18/87 (20%), Positives = 38/87 (43%)
Query: 612 EDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTV-LNQQPLLRPLKL 670
+ FGR+ I + + + D ++ ++ A+ +L+ + QPLL PL+L
Sbjct: 433 QSFGRVLTIVHSDCALL--ERDGNISLLSLPVAERWLRQAQLTPGEAPVCAQPLLIPLRL 490
Query: 671 DLTPEEEVVASMHMDIIRKNGFSLEED 697
++ EE+ + + G + D
Sbjct: 491 KVSAEEKSALEKAQSALAELGIDFQSD 517
>UNIPROTKB|F1MA66 [details] [associations]
symbol:F1MA66 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006298 "mismatch repair" evidence=IEA] [GO:0030983 "mismatched
DNA binding" evidence=IEA] InterPro:IPR009071 InterPro:IPR002099
InterPro:IPR013507 Pfam:PF01119 GO:GO:0005524 Gene3D:1.10.30.10
SMART:SM00398 SUPFAM:SSF47095 PROSITE:PS50118 GO:GO:0006298
GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 PANTHER:PTHR10073
IPI:IPI00779106 Ensembl:ENSRNOT00000059160 ArrayExpress:F1MA66
Uniprot:F1MA66
Length = 539
Score = 147 (56.8 bits), Expect = 8.8e-08, Sum P(2) = 8.8e-08
Identities = 37/125 (29%), Positives = 59/125 (47%)
Query: 166 DRQYFFVNDRPVDLPKVSKLVNELYK----GANSRQYPIAIMNFIVPTRACDVNVTPDKR 221
+R + F+N RPV + KL+ Y ++R YPI + VP+ D+N+TPDK
Sbjct: 41 ERSFIFINSRPVHQKDILKLIRHYYNLKCLKESTRLYPIFFLKIDVPSAEVDINLTPDKS 100
Query: 222 KVFFSDECSILHALREGLQEIYSP--NNASYSVNKVEQLIEPEKSGPSSGAESCMFLEQL 279
+V ++ S+L AL L Y P SY N+V+ + S E+ + ++
Sbjct: 101 QVLLQNKESVLIALENLLMTCYGPLPTTESYENNRVD--VSSANVVISETTETDVLFNKM 158
Query: 280 SPDGN 284
GN
Sbjct: 159 ESSGN 163
Score = 58 (25.5 bits), Expect = 8.8e-08, Sum P(2) = 8.8e-08
Identities = 43/176 (24%), Positives = 70/176 (39%)
Query: 644 ADEKYNFERLSQS---TVLNQQPLLRPLKLDLTPEEEVVASMHM-DI-IRKNGFSLEEDP 698
A K +E LS+ + N L L T EE S+++ D + NGF + P
Sbjct: 372 AQIKAQWETLSEEEKHNLFNGSDYLEVLHKMSTVEERCRGSVYLCDPRLTANGFKIRLTP 431
Query: 699 HALAGLRFRLKAVPFSKKITF--GVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSR 756
A +L + K F G D K L + +N+ E +YK+ +
Sbjct: 432 AASGSQSPQLSRLLDGKAECFPIGPGDNKTLYNN-NNNKNE-----NYKIRFR------K 479
Query: 757 VRAMLASRACRSSIMIGDALGRNEMQKILEHLADL--NSPWNCPHGRPTMRHLVDL 810
V + + A R S + L + ++Q ++ + C HGRP + HL+ L
Sbjct: 480 VHSDIKGEAVRLSRQLPMYLPQEDVQDLIYKMKHQFGKEIKGCVHGRPFLHHLIHL 535
>RGD|1309227 [details] [associations]
symbol:Mlh3 "mutL homolog 3 (E. coli)" species:10116 "Rattus
norvegicus" [GO:0000793 "condensed chromosome" evidence=ISO]
[GO:0000795 "synaptonemal complex" evidence=ISO;IBA] [GO:0001673
"male germ cell nucleus" evidence=IEA;ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005712 "chiasma"
evidence=ISO;IBA] [GO:0006200 "ATP catabolic process" evidence=IBA]
[GO:0006298 "mismatch repair" evidence=ISO;IBA] [GO:0006974
"response to DNA damage stimulus" evidence=ISO] [GO:0007130
"synaptonemal complex assembly" evidence=IEA;ISO] [GO:0007131
"reciprocal meiotic recombination" evidence=IBA] [GO:0007140 "male
meiosis" evidence=IEA;ISO] [GO:0007144 "female meiosis I"
evidence=IEA;ISO] [GO:0008104 "protein localization"
evidence=IEA;ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0016887 "ATPase activity" evidence=IBA] [GO:0019237
"centromeric DNA binding" evidence=IEA;ISO] [GO:0030983 "mismatched
DNA binding" evidence=IEA] [GO:0032300 "mismatch repair complex"
evidence=IBA] [GO:0032390 "MutLbeta complex" evidence=IBA]
[GO:0032407 "MutSalpha complex binding" evidence=IBA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014790 Pfam:PF01119 Pfam:PF02518 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 RGD:1309227
GO:GO:0005524 GO:GO:0008104 GO:GO:0003682 GO:GO:0016887
GO:GO:0006298 GO:GO:0019237 GO:GO:0001673 GO:GO:0003697
GO:GO:0007140 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407 GO:GO:0007130
EMBL:CH473982 GO:GO:0007144 GO:GO:0000795 GO:GO:0005712
GO:GO:0032390 InterPro:IPR014762 PANTHER:PTHR10073 CTD:27030
KO:K08739 GeneTree:ENSGT00550000074903 IPI:IPI00877366
RefSeq:NP_001101513.1 UniGene:Rn.119254 Ensembl:ENSRNOT00000033493
GeneID:314320 KEGG:rno:314320 UCSC:RGD:1309227 OrthoDB:EOG4K9BB9
NextBio:667464 Uniprot:D4ADG4
Length = 1442
Score = 126 (49.4 bits), Expect = 9.1e-08, Sum P(4) = 9.1e-08
Identities = 53/193 (27%), Positives = 86/193 (44%)
Query: 636 LFIVDQHAADEKYNFERLSQSTVLNQQP------------LLRPLKLDLTPEEE-VVASM 682
L +VDQHAA E+ E+L + Q P ++ PL + ++ E+ ++ S
Sbjct: 1207 LVLVDQHAAHERVRLEQLITDSYEKQAPQSAGRKKLLSSTIIPPLAITVSEEQRRLLRSY 1266
Query: 683 HM---DIIRKNGFSLEEDPHALAGLRFRLKAVPF-SKKITFGVEDV-KDLISTLADNQGE 737
H D+ + F D L G + L V + ++ G V K ++ L Q E
Sbjct: 1267 HKHLEDLGLELLFPDASDSSILVG-KVPLCFVEREANELRRGRSPVTKSIVEELIREQLE 1325
Query: 738 CSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNC 797
++ + P V+ +LAS+AC +I D L E +++E L+ P+ C
Sbjct: 1326 --LLQT--TGGIQGTLPLTVQKVLASQACHGAIKFNDRLSLEESCRLIEALSLCQLPFQC 1381
Query: 798 PHGRPTMRHLVDL 810
HGRP+M L DL
Sbjct: 1382 AHGRPSMLPLADL 1394
Score = 83 (34.3 bits), Expect = 9.1e-08, Sum P(4) = 9.1e-08
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR ++ V ++ +G + L V+EL NS+DA AT + I + + QV+DNG G
Sbjct: 2 IRCLSDEVQAKLRSGLALSSLGQCVEELTLNSIDAEATCVAIRVNMETFQ-VQVIDNGLG 60
Query: 72 IS 73
++
Sbjct: 61 MA 62
Score = 50 (22.7 bits), Expect = 9.1e-08, Sum P(4) = 9.1e-08
Identities = 22/106 (20%), Positives = 46/106 (43%)
Query: 86 QAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSD 145
+A +L+ + F N S++L+ + + ++G+ L + K
Sbjct: 176 EALSLMHPSISFSLRNDVSG---SMILQLPKTKDICSRFCQIYGLGKSQKLREIHY-KYK 231
Query: 146 SCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYK 191
+ G++S + +N+ Q+ FVN R V K+ KL++ L +
Sbjct: 232 EFEFNGYISSEAHYN-KNM---QFLFVNRRLVLRTKLHKLIDFLLR 273
Score = 48 (22.0 bits), Expect = 9.1e-08, Sum P(4) = 9.1e-08
Identities = 63/307 (20%), Positives = 123/307 (40%)
Query: 195 SRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASYSVNK 254
S + I ++N P DV + P K + F + ++L ++EG+++ ++
Sbjct: 300 SELHGIYVINVQCPFCEYDVCIEPAKTLIEFQNWDTVLICVQEGIKKFLKQEKLFVELSS 359
Query: 255 VEQLIEPEKSGPSSGAESCMFLEQLSPDGNGCIEILNEQQISKGNTPKTVEVDTLHSDAL 314
E + E + S + + Q C + + Q + N + E+ L S A+
Sbjct: 360 -EDIKEFNEDNGFSLIGTTL---QTQSTHEKCDQ--SSFQEACNNILDSYEMFNLQSKAV 413
Query: 315 EGLVHSSNENGKGNFTLKAHDDKSADRLSKFNCMKLIGPHNVPTEE---NCPSP---SRV 368
+ + N + + A K+ D + + L G H E N S SR+
Sbjct: 414 KRIATLENRTTQNSGDSGAIRKKTEDSYT-YESDDL-G-HRKTVESALYNSDSAYLGSRM 470
Query: 369 MAKNITEDGESDSRSRCIQSSLNKFVTVSKRKYES----IARPL-TEMPLLRNQS-LHCQ 422
++I + + + +S L S+R +E+ + P+ T PL +++ L +
Sbjct: 471 SEEDIAKTSHAGENEKWKKSLLEN--RTSERPHETSPKMFSSPIQTHHPLEESEADLEIE 528
Query: 423 MKKSNSDMDA--VDTRSPVRRHLVDDIAKLNKIE----PFKCN--KADKV--SKEIENIL 472
MK S ++ A + S ++ L + + ++E PF+ +A KE + L
Sbjct: 529 MKSSTVNVMAANIPPNSEIQSQL-EQLEDAPEVECQPLPFETTLLRAQGTLKKKERKKEL 587
Query: 473 SSEGNTN 479
SS G N
Sbjct: 588 SSHGRVN 594
Score = 44 (20.5 bits), Expect = 2.2e-07, Sum P(4) = 2.2e-07
Identities = 13/56 (23%), Positives = 26/56 (46%)
Query: 340 DRLSKFNCMKLIGPHNVPTEENCPSPSRVMAKNITEDGESDSRSR---CIQSSLNK 392
++L K L P + P +++ S + + ++T+D E S C S ++K
Sbjct: 916 NKLEKTESEVLPMPDSAPEDDSINKNSVLCSNSVTDDREKPETSLLLPCSDSKISK 971
>GENEDB_PFALCIPARUM|PF11_0184 [details] [associations]
symbol:PF11_0184 "DNA mismatch repair protein
MLH1, putative" species:5833 "Plasmodium falciparum" [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR002099
InterPro:IPR003594 InterPro:IPR011186 InterPro:IPR013507
Pfam:PF01119 SMART:SM00387 Prosite:PS00058 GO:GO:0005524
GO:GO:0005634 GO:GO:0016887 GO:GO:0006298 Gene3D:3.30.565.10
SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 EMBL:AE014186 HSSP:P23367
KO:K08734 InterPro:IPR014762 PANTHER:PTHR10073
PANTHER:PTHR10073:SF11 RefSeq:XP_001347855.1
ProteinModelPortal:Q8IIJ0 EnsemblProtists:PF11_0184:mRNA
GeneID:810731 KEGG:pfa:PF11_0184 EuPathDB:PlasmoDB:PF3D7_1117800
HOGENOM:HOG000282300 OMA:DNNITCN ProtClustDB:CLSZ2500887
Uniprot:Q8IIJ0
Length = 1016
Score = 127 (49.8 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 27/60 (45%), Positives = 42/60 (70%)
Query: 20 VHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFKV 79
++RI AG+VI +A+KELVENSLDA ++SI I L + G + Q++D+G GI + ++
Sbjct: 58 INRIAAGEVIIRPCNALKELVENSLDANSSSISIHLNKGGLKSLQIIDDGDGIHKEDLRI 117
Score = 87 (35.7 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 47/190 (24%), Positives = 81/190 (42%)
Query: 127 VFGMNIYNCLEPVAICKSDSC----KVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKV 182
V+G NI L + + K S K G +S P + FF+NDR V+ +
Sbjct: 413 VYGRNISKELSTIFL-KEKSIPTFFKCYGLISNPTYNGKKGC---YIFFINDRLVESNII 468
Query: 183 SKLVNELYKGANSR-QYPIAIMNFIVPTRACDVNVTPDKRKVFF--SDECSIL--HALRE 237
K Y ++ YP ++ + D+NV P K++V F +E S+L ++E
Sbjct: 469 KKSCENQYSNFLAKGNYPWIYLSLRLKYDIVDINVHPTKKEVHFLYQEEISMLIGKKIQE 528
Query: 238 GLQEIYSPNNASYSVNKVEQLIEPEKSGPSSGAESCMFLEQLSPDGNGCIEILNEQQISK 297
L+ + N ++++ E+L++ + SS E ++LS G + N I +
Sbjct: 529 FLKSFH--NMRTFNITG-EKLLQTKLDINSSMLEIKKEDKELSKLRQGLLHD-NNNVIKR 584
Query: 298 GNTPKTVEVD 307
K V D
Sbjct: 585 QIDTKRVRTD 594
Score = 42 (19.8 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 72 ISPNNFKVRAVFLCQAYALIAKGVRFVC----TNTTGKNVKSV 110
++PN+ + + + Q YA+ V F C +NT N + V
Sbjct: 209 MNPNDEYNKCLEVLQKYAIHYPNVSFTCKKWLSNTVDLNTQKV 251
>UNIPROTKB|Q8IIJ0 [details] [associations]
symbol:PF11_0184 "DNA mismatch repair protein MLH1,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0006200
"ATP catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR011186 InterPro:IPR013507 Pfam:PF01119 SMART:SM00387
Prosite:PS00058 GO:GO:0005524 GO:GO:0005634 GO:GO:0016887
GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 EMBL:AE014186 HSSP:P23367 KO:K08734
InterPro:IPR014762 PANTHER:PTHR10073 PANTHER:PTHR10073:SF11
RefSeq:XP_001347855.1 ProteinModelPortal:Q8IIJ0
EnsemblProtists:PF11_0184:mRNA GeneID:810731 KEGG:pfa:PF11_0184
EuPathDB:PlasmoDB:PF3D7_1117800 HOGENOM:HOG000282300 OMA:DNNITCN
ProtClustDB:CLSZ2500887 Uniprot:Q8IIJ0
Length = 1016
Score = 127 (49.8 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 27/60 (45%), Positives = 42/60 (70%)
Query: 20 VHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFKV 79
++RI AG+VI +A+KELVENSLDA ++SI I L + G + Q++D+G GI + ++
Sbjct: 58 INRIAAGEVIIRPCNALKELVENSLDANSSSISIHLNKGGLKSLQIIDDGDGIHKEDLRI 117
Score = 87 (35.7 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 47/190 (24%), Positives = 81/190 (42%)
Query: 127 VFGMNIYNCLEPVAICKSDSC----KVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKV 182
V+G NI L + + K S K G +S P + FF+NDR V+ +
Sbjct: 413 VYGRNISKELSTIFL-KEKSIPTFFKCYGLISNPTYNGKKGC---YIFFINDRLVESNII 468
Query: 183 SKLVNELYKGANSR-QYPIAIMNFIVPTRACDVNVTPDKRKVFF--SDECSIL--HALRE 237
K Y ++ YP ++ + D+NV P K++V F +E S+L ++E
Sbjct: 469 KKSCENQYSNFLAKGNYPWIYLSLRLKYDIVDINVHPTKKEVHFLYQEEISMLIGKKIQE 528
Query: 238 GLQEIYSPNNASYSVNKVEQLIEPEKSGPSSGAESCMFLEQLSPDGNGCIEILNEQQISK 297
L+ + N ++++ E+L++ + SS E ++LS G + N I +
Sbjct: 529 FLKSFH--NMRTFNITG-EKLLQTKLDINSSMLEIKKEDKELSKLRQGLLHD-NNNVIKR 584
Query: 298 GNTPKTVEVD 307
K V D
Sbjct: 585 QIDTKRVRTD 594
Score = 42 (19.8 bits), Expect = 1.5e-07, Sum P(3) = 1.5e-07
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 72 ISPNNFKVRAVFLCQAYALIAKGVRFVC----TNTTGKNVKSV 110
++PN+ + + + Q YA+ V F C +NT N + V
Sbjct: 209 MNPNDEYNKCLEVLQKYAIHYPNVSFTCKKWLSNTVDLNTQKV 251
>UNIPROTKB|Q9UHC1 [details] [associations]
symbol:MLH3 "DNA mismatch repair protein Mlh3" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030983
"mismatched DNA binding" evidence=IEA] [GO:0001673 "male germ cell
nucleus" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0007130 "synaptonemal complex assembly"
evidence=IEA] [GO:0007140 "male meiosis" evidence=IEA] [GO:0007144
"female meiosis I" evidence=IEA] [GO:0008104 "protein localization"
evidence=IEA] [GO:0019237 "centromeric DNA binding" evidence=IEA]
[GO:0000795 "synaptonemal complex" evidence=IBA] [GO:0003697
"single-stranded DNA binding" evidence=IBA] [GO:0005712 "chiasma"
evidence=IBA] [GO:0006298 "mismatch repair" evidence=NAS;IBA]
[GO:0007131 "reciprocal meiotic recombination" evidence=NAS;IBA]
[GO:0016887 "ATPase activity" evidence=IBA] [GO:0032300 "mismatch
repair complex" evidence=IBA] [GO:0032390 "MutLbeta complex"
evidence=IBA] [GO:0032407 "MutSalpha complex binding" evidence=IBA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0003696 "satellite
DNA binding" evidence=TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0006200 "ATP catabolic process" evidence=IBA]
InterPro:IPR002099 InterPro:IPR003594 InterPro:IPR013507
InterPro:IPR014790 Pfam:PF01119 Pfam:PF02518 Pfam:PF08676
SMART:SM00387 SMART:SM00853 Prosite:PS00058 GO:GO:0005524
GO:GO:0008104 GO:GO:0003682 GO:GO:0016887 GO:GO:0006298
GO:GO:0019237 Reactome:REACT_111183 GO:GO:0001673 GO:GO:0003697
EMBL:AL049780 GO:GO:0007140 Gene3D:3.30.565.10 SUPFAM:SSF55874
MIM:114500 GO:GO:0030983 Gene3D:3.30.230.10 InterPro:IPR020568
InterPro:IPR014721 SUPFAM:SSF54211 GO:GO:0007131 GO:GO:0032407
GO:GO:0007130 Orphanet:144 GO:GO:0003696 GO:GO:0007144
GO:GO:0000795 eggNOG:COG0323 GO:GO:0005712 GO:GO:0032390
InterPro:IPR014762 PANTHER:PTHR10073 EMBL:AF195657 EMBL:AF195658
EMBL:AB039667 EMBL:AY963685 EMBL:L40399 IPI:IPI00005811
IPI:IPI00218050 RefSeq:NP_001035197.1 UniGene:Hs.436650
ProteinModelPortal:Q9UHC1 SMR:Q9UHC1 IntAct:Q9UHC1 STRING:Q9UHC1
PhosphoSite:Q9UHC1 DMDM:13878584 PaxDb:Q9UHC1 PRIDE:Q9UHC1
DNASU:27030 Ensembl:ENST00000238662 Ensembl:ENST00000355774
Ensembl:ENST00000556740 GeneID:27030 KEGG:hsa:27030 UCSC:uc001xrd.1
UCSC:uc001xre.1 CTD:27030 GeneCards:GC14M075481 HGNC:HGNC:7128
MIM:604395 MIM:614385 neXtProt:NX_Q9UHC1 PharmGKB:PA30845
HOGENOM:HOG000140944 HOVERGEN:HBG006375 InParanoid:Q9UHC1 KO:K08739
OMA:HGAIKFN PhylomeDB:Q9UHC1 ChiTaRS:MLH3 GenomeRNAi:27030
NextBio:49558 ArrayExpress:Q9UHC1 Bgee:Q9UHC1 CleanEx:HS_MLH3
Genevestigator:Q9UHC1 GermOnline:ENSG00000119684 Uniprot:Q9UHC1
Length = 1453
Score = 123 (48.4 bits), Expect = 1.9e-07, Sum P(4) = 1.9e-07
Identities = 55/205 (26%), Positives = 89/205 (43%)
Query: 636 LFIVDQHAADEKYNFERLSQSTVLNQQP------------LLRPLKLDLTPEEE-VVASM 682
L +VDQHAA E+ E+L + QQ L+ PL++ +T E+ ++
Sbjct: 1219 LVLVDQHAAHERIRLEQLIIDSYEKQQAQGSGRKKLLSSTLIPPLEITVTEEQRRLLWCY 1278
Query: 683 HM---DIIRKNGFSLEEDPHALAGLRFRLKAVPF-SKKITFGVEDV-KDLISTLADNQGE 737
H D+ + F D L G + L V + ++ G V K ++ Q E
Sbjct: 1279 HKNLEDLGLEFVFPDTSDSLVLVG-KVPLCFVEREANELRRGRSTVTKSIVEEFIREQLE 1337
Query: 738 CSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNC 797
++ + P V+ +LAS+AC +I D L E +++E L+ P+ C
Sbjct: 1338 --LLQT--TGGIQGTLPLTVQKVLASQACHGAIKFNDGLSLQESCRLIEALSSCQLPFQC 1393
Query: 798 PHGRPTMRHLVDLTTIR--KNIDEN 820
HGRP+M L D+ + K I N
Sbjct: 1394 AHGRPSMLPLADIDHLEQEKQIKPN 1418
Score = 73 (30.8 bits), Expect = 1.9e-07, Sum P(4) = 1.9e-07
Identities = 19/65 (29%), Positives = 35/65 (53%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ ++ V ++ +G I L V+EL NS+DA A + + + + QV+DNG G
Sbjct: 2 IKCLSVEVQAKLRSGLAISSLGQCVEELALNSIDAEAKCVAVRVNMETFQ-VQVIDNGFG 60
Query: 72 ISPNN 76
+ ++
Sbjct: 61 MGSDD 65
Score = 57 (25.1 bits), Expect = 1.9e-07, Sum P(4) = 1.9e-07
Identities = 23/106 (21%), Positives = 48/106 (45%)
Query: 86 QAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSD 145
+A +L+ + F N S+VL+ + + ++G+ L ++ K
Sbjct: 176 EALSLMHPSISFSLRNDVSG---SMVLQLPKTKDVCSRFCQIYGLGKSQKLREISF-KYK 231
Query: 146 SCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYK 191
++ G++S + +N+ Q+ FVN R V K+ KL++ L +
Sbjct: 232 EFELSGYISSEAHYN-KNM---QFLFVNKRLVLRTKLHKLIDFLLR 273
Score = 51 (23.0 bits), Expect = 1.9e-07, Sum P(4) = 1.9e-07
Identities = 36/143 (25%), Positives = 65/143 (45%)
Query: 389 SLNKFVTVSKRKYESIARPL-TEMPLLRNQSLHCQMKKSNSDMDAVDTRSPVRRHLVDDI 447
SL KF KR+Y + PL TE+ + + ++ D+ D R D+
Sbjct: 753 SLEKF----KRQYGKVENPLDTEVEESNGVTTNLSLQVE-PDILLKDKN----RLENSDV 803
Query: 448 AKLNKIEPFKCNKADKVSKEIENILSSEG---NTNEKPREELVTQEKATPL-LNVPSIVS 503
K+ +E + +D + +IL+SE + +E E+ + + +P+ L S+ +
Sbjct: 804 CKITTMEH---SDSDSSCQPASHILNSEKFPFSKDEDCLEQQMPSLRESPMTLKELSLFN 860
Query: 504 SSN-DLKKNSEDLSVAASHLQFS 525
DL+K+SE L+ S L+ S
Sbjct: 861 RKPLDLEKSSESLASKLSRLKGS 883
Score = 48 (22.0 bits), Expect = 3.7e-07, Sum P(4) = 3.7e-07
Identities = 53/283 (18%), Positives = 116/283 (40%)
Query: 175 RPVDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRAC--DVNVTPDKRKVFFSDECSIL 232
+P + P ++ + L + Y I ++N V + C DV + P K + F + ++L
Sbjct: 280 KPKNGPTSRQMNSSLRHRSTPELYGIYVIN--VQCQFCEYDVCMEPAKTLIEFQNWDTLL 337
Query: 233 HALREGLQEIYSPNNASYSVNKVEQLIEPEKSGPSSGAESCMFLEQLSPDGNGCIEILNE 292
++EG++ ++ E + E + S ++ + ++++ D E N
Sbjct: 338 FCIQEGVKMFLKQEKLFVELSG-EDIKEFSEDNGFSLFDATL-QKRVTSD-----ERSNF 390
Query: 293 QQISKGNTPKTVEVDTLHSDALEGLVHSSNENGKGNFTLKAHDDKSADRLSKFNCMKLIG 352
Q+ N + E+ L S A++ + N N + + +A + D + G
Sbjct: 391 QEACN-NILDSYEMFNLQSKAVKRKTTAENVNTQSSRDSEATRKNTNDAF--LYIYESGG 447
Query: 353 P-HNVPTEENCPSPSRVMAKNITEDGESDSRSRCIQSSLNKFVTVSKRKYESIARPLTEM 411
P H+ TE + + +++ + E+ S ++ +K + E+ EM
Sbjct: 448 PGHSKMTEPSLQNKDSSCSESKMLEQETIVASEAGENEKHKKSFLEHSSLENPCGTSLEM 507
Query: 412 PLLRNQSLHCQMKKSNSDMDAVDTRSPVRRHLVDDIAKLNKIE 454
L Q+ C ++S D++ + S + +I K N+I+
Sbjct: 508 FLSPFQT-PCHFEESGQDLE-IWKESTTVNGMAANILKNNRIQ 548
Score = 46 (21.3 bits), Expect = 5.9e-07, Sum P(4) = 5.9e-07
Identities = 28/125 (22%), Positives = 53/125 (42%)
Query: 369 MAKNITEDGESDSRSRC--IQSSLNKFVTVSKRKYESIARPLTEMPLLRNQSLHCQMKKS 426
+ K +T D S+ + C I S F SK ++ R T + S + +
Sbjct: 378 LQKRVTSDERSNFQEACNNILDSYEMFNLQSK----AVKRKTTAENVNTQSSRDSEATRK 433
Query: 427 NSDMDAV----DTRSPVRRHLVDDIAKLNKIEPFKCNKADKVSKEIENILSSEGNTNEKP 482
N++ DA ++ P + + + NK C+++ + E E I++SE NEK
Sbjct: 434 NTN-DAFLYIYESGGPGHSKMTEPSLQ-NKDS--SCSESKML--EQETIVASEAGENEKH 487
Query: 483 REELV 487
++ +
Sbjct: 488 KKSFL 492
Score = 44 (20.5 bits), Expect = 9.2e-07, Sum P(4) = 9.2e-07
Identities = 12/29 (41%), Positives = 13/29 (44%)
Query: 364 SPSRVMAKNITEDGESDSRSRCIQSSLNK 392
SPS M N ED D C QS +K
Sbjct: 1000 SPSG-MLMNPVEDATGDQNGICFQSEESK 1027
>UNIPROTKB|C9JF76 [details] [associations]
symbol:PMS1 "PMS1 protein homolog 1" species:9606 "Homo
sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030983
"mismatched DNA binding" evidence=IEA] [GO:0006298 "mismatch
repair" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
SMART:SM00387 Prosite:PS00058 GO:GO:0005524 GO:GO:0006298
Gene3D:3.30.565.10 SUPFAM:SSF55874 EMBL:AC013468 GO:GO:0030983
InterPro:IPR014762 PANTHER:PTHR10073 EMBL:AC008122 HGNC:HGNC:9121
ChiTaRS:PMS1 IPI:IPI01013621 ProteinModelPortal:C9JF76 SMR:C9JF76
STRING:C9JF76 Ensembl:ENST00000424766 HOGENOM:HOG000137699
ArrayExpress:C9JF76 Bgee:C9JF76 Uniprot:C9JF76
Length = 194
Score = 138 (53.6 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 29/71 (40%), Positives = 45/71 (63%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
++ + V + + Q+I + S VKEL+ENSLDAGATS+++ L+ YG + +V DNG G
Sbjct: 1 MKQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSVDVKLENYGFDKIEVRDNGEG 60
Query: 72 ISPNNFKVRAV 82
I + V A+
Sbjct: 61 IKAVDAPVMAM 71
>UNIPROTKB|G3V419 [details] [associations]
symbol:MLH3 "DNA mismatch repair protein Mlh3" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006298
"mismatch repair" evidence=IEA] [GO:0030983 "mismatched DNA
binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 Pfam:PF01119 Pfam:PF02518 SMART:SM00387
Prosite:PS00058 GO:GO:0005524 GO:GO:0006298 EMBL:AL049780
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
InterPro:IPR014762 PANTHER:PTHR10073 HGNC:HGNC:7128 ChiTaRS:MLH3
ProteinModelPortal:G3V419 SMR:G3V419 Ensembl:ENST00000556257
ArrayExpress:G3V419 Bgee:G3V419 Uniprot:G3V419
Length = 1275
Score = 116 (45.9 bits), Expect = 2.4e-07, Sum P(5) = 2.4e-07
Identities = 25/69 (36%), Positives = 37/69 (53%)
Query: 754 PSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTI 813
P V+ +LAS+AC +I D L E +++E L+ P+ C HGRP+M L D+ +
Sbjct: 1172 PLTVQKVLASQACHGAIKFNDGLSLQESCRLIEALSSCQLPFQCAHGRPSMLPLADIDHL 1231
Query: 814 R--KNIDEN 820
K I N
Sbjct: 1232 EQEKQIKPN 1240
Score = 73 (30.8 bits), Expect = 2.4e-07, Sum P(5) = 2.4e-07
Identities = 19/65 (29%), Positives = 35/65 (53%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ ++ V ++ +G I L V+EL NS+DA A + + + + QV+DNG G
Sbjct: 2 IKCLSVEVQAKLRSGLAISSLGQCVEELALNSIDAEAKCVAVRVNMETFQ-VQVIDNGFG 60
Query: 72 ISPNN 76
+ ++
Sbjct: 61 MGSDD 65
Score = 57 (25.1 bits), Expect = 2.4e-07, Sum P(5) = 2.4e-07
Identities = 23/106 (21%), Positives = 48/106 (45%)
Query: 86 QAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSD 145
+A +L+ + F N S+VL+ + + ++G+ L ++ K
Sbjct: 176 EALSLMHPSISFSLRNDVSG---SMVLQLPKTKDVCSRFCQIYGLGKSQKLREISF-KYK 231
Query: 146 SCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYK 191
++ G++S + +N+ Q+ FVN R V K+ KL++ L +
Sbjct: 232 EFELSGYISSEAHYN-KNM---QFLFVNKRLVLRTKLHKLIDFLLR 273
Score = 51 (23.0 bits), Expect = 5.8e-07, Sum P(4) = 5.8e-07
Identities = 36/143 (25%), Positives = 65/143 (45%)
Query: 389 SLNKFVTVSKRKYESIARPL-TEMPLLRNQSLHCQMKKSNSDMDAVDTRSPVRRHLVDDI 447
SL KF KR+Y + PL TE+ + + ++ D+ D R D+
Sbjct: 753 SLEKF----KRQYGKVENPLDTEVEESNGVTTNLSLQVE-PDILLKDKN----RLENSDV 803
Query: 448 AKLNKIEPFKCNKADKVSKEIENILSSEG---NTNEKPREELVTQEKATPL-LNVPSIVS 503
K+ +E + +D + +IL+SE + +E E+ + + +P+ L S+ +
Sbjct: 804 CKITTMEH---SDSDSSCQPASHILNSEKFPFSKDEDCLEQQMPSLRESPMTLKELSLFN 860
Query: 504 SSN-DLKKNSEDLSVAASHLQFS 525
DL+K+SE L+ S L+ S
Sbjct: 861 RKPLDLEKSSESLASKLSRLKGS 883
Score = 48 (22.0 bits), Expect = 2.4e-07, Sum P(5) = 2.4e-07
Identities = 53/283 (18%), Positives = 116/283 (40%)
Query: 175 RPVDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRAC--DVNVTPDKRKVFFSDECSIL 232
+P + P ++ + L + Y I ++N V + C DV + P K + F + ++L
Sbjct: 280 KPKNGPTSRQMNSSLRHRSTPELYGIYVIN--VQCQFCEYDVCMEPAKTLIEFQNWDTLL 337
Query: 233 HALREGLQEIYSPNNASYSVNKVEQLIEPEKSGPSSGAESCMFLEQLSPDGNGCIEILNE 292
++EG++ ++ E + E + S ++ + ++++ D E N
Sbjct: 338 FCIQEGVKMFLKQEKLFVELSG-EDIKEFSEDNGFSLFDATL-QKRVTSD-----ERSNF 390
Query: 293 QQISKGNTPKTVEVDTLHSDALEGLVHSSNENGKGNFTLKAHDDKSADRLSKFNCMKLIG 352
Q+ N + E+ L S A++ + N N + + +A + D + G
Sbjct: 391 QEACN-NILDSYEMFNLQSKAVKRKTTAENVNTQSSRDSEATRKNTNDAF--LYIYESGG 447
Query: 353 P-HNVPTEENCPSPSRVMAKNITEDGESDSRSRCIQSSLNKFVTVSKRKYESIARPLTEM 411
P H+ TE + + +++ + E+ S ++ +K + E+ EM
Sbjct: 448 PGHSKMTEPSLQNKDSSCSESKMLEQETIVASEAGENEKHKKSFLEHSSLENPCGTSLEM 507
Query: 412 PLLRNQSLHCQMKKSNSDMDAVDTRSPVRRHLVDDIAKLNKIE 454
L Q+ C ++S D++ + S + +I K N+I+
Sbjct: 508 FLSPFQT-PCHFEESGQDLE-IWKESTTVNGMAANILKNNRIQ 548
Score = 47 (21.6 bits), Expect = 2.4e-07, Sum P(5) = 2.4e-07
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 713 FSKKITFGVE--DVKDLISTLADNQGE 737
F + VE D+KDL STL+ G+
Sbjct: 642 FGNRTRHSVETPDIKDLASTLSKESGQ 668
Score = 46 (21.3 bits), Expect = 3.7e-07, Sum P(5) = 3.7e-07
Identities = 28/125 (22%), Positives = 53/125 (42%)
Query: 369 MAKNITEDGESDSRSRC--IQSSLNKFVTVSKRKYESIARPLTEMPLLRNQSLHCQMKKS 426
+ K +T D S+ + C I S F SK ++ R T + S + +
Sbjct: 378 LQKRVTSDERSNFQEACNNILDSYEMFNLQSK----AVKRKTTAENVNTQSSRDSEATRK 433
Query: 427 NSDMDAV----DTRSPVRRHLVDDIAKLNKIEPFKCNKADKVSKEIENILSSEGNTNEKP 482
N++ DA ++ P + + + NK C+++ + E E I++SE NEK
Sbjct: 434 NTN-DAFLYIYESGGPGHSKMTEPSLQ-NKDS--SCSESKML--EQETIVASEAGENEKH 487
Query: 483 REELV 487
++ +
Sbjct: 488 KKSFL 492
Score = 44 (20.5 bits), Expect = 2.7e-06, Sum P(4) = 2.7e-06
Identities = 12/29 (41%), Positives = 13/29 (44%)
Query: 364 SPSRVMAKNITEDGESDSRSRCIQSSLNK 392
SPS M N ED D C QS +K
Sbjct: 1000 SPSG-MLMNPVEDATGDQNGICFQSEESK 1027
Score = 39 (18.8 bits), Expect = 1.7e-06, Sum P(5) = 1.7e-06
Identities = 11/43 (25%), Positives = 22/43 (51%)
Query: 632 LDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTP 674
L+Q+ + + +EK+ L S++ N P L++ L+P
Sbjct: 471 LEQETIVASEAGENEKHKKSFLEHSSLEN--PCGTSLEMFLSP 511
>UNIPROTKB|E1BNK2 [details] [associations]
symbol:MLH3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0019237 "centromeric DNA binding" evidence=IEA]
[GO:0008104 "protein localization" evidence=IEA] [GO:0007144
"female meiosis I" evidence=IEA] [GO:0007140 "male meiosis"
evidence=IEA] [GO:0007130 "synaptonemal complex assembly"
evidence=IEA] [GO:0006298 "mismatch repair" evidence=IEA]
[GO:0005712 "chiasma" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0001673 "male germ cell nucleus" evidence=IEA]
[GO:0000795 "synaptonemal complex" evidence=IEA] [GO:0030983
"mismatched DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR014790 Pfam:PF01119 Pfam:PF08676
SMART:SM00853 Prosite:PS00058 GO:GO:0005524 GO:GO:0008104
GO:GO:0003682 GO:GO:0006298 GO:GO:0019237 GO:GO:0001673
GO:GO:0007140 Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983
Gene3D:3.30.230.10 InterPro:IPR020568 InterPro:IPR014721
SUPFAM:SSF54211 GO:GO:0007130 GO:GO:0007144 GO:GO:0000795
GO:GO:0005712 InterPro:IPR014762 PANTHER:PTHR10073 OMA:HGAIKFN
GeneTree:ENSGT00550000074903 EMBL:DAAA02029619 IPI:IPI00924115
Ensembl:ENSBTAT00000061421 ArrayExpress:E1BNK2 Uniprot:E1BNK2
Length = 1452
Score = 117 (46.2 bits), Expect = 1.2e-06, Sum P(4) = 1.2e-06
Identities = 51/193 (26%), Positives = 84/193 (43%)
Query: 636 LFIVDQHAADEKYNFERLSQSTVLNQQP-------LLR-----PLKLDLTPEEEVVASMH 683
L +VDQHAA E+ E+L + QQP LL PL++ +T E+ + +
Sbjct: 1219 LVLVDQHAAHERIRLEQLIIDSYEKQQPQGFGRKKLLSSIVSPPLEITVTEEQRRLLRCY 1278
Query: 684 MDIIRKNGFSL----EEDPHALAGLRFRLKAVPF-SKKITFGVEDV-KDLISTLADNQGE 737
+ G + D L G + L V + ++ G V K ++ Q E
Sbjct: 1279 HKNLEDLGLEIVFPDTSDSLVLIG-KVPLCFVEREASELRRGRSTVTKGIVEEFIREQVE 1337
Query: 738 CSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNC 797
++ + P V+ +LAS+AC +I D L E +++E L+ P+ C
Sbjct: 1338 --LLQT--TGGIQGTLPLTVQKVLASQACHGAIKFNDGLSFEESCRLIEALSWCQLPFQC 1393
Query: 798 PHGRPTMRHLVDL 810
HGRP+M L ++
Sbjct: 1394 AHGRPSMLPLANI 1406
Score = 73 (30.8 bits), Expect = 1.2e-06, Sum P(4) = 1.2e-06
Identities = 19/65 (29%), Positives = 35/65 (53%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ ++ V R+ +G + L V+EL NS+DA A + + + + QV+DNG G
Sbjct: 2 IKCLSAEVQARLRSGLAVCSLGQCVEELALNSIDAEAKCVAVRVNMETFQ-VQVIDNGFG 60
Query: 72 ISPNN 76
+ ++
Sbjct: 61 MGSDD 65
Score = 55 (24.4 bits), Expect = 1.2e-06, Sum P(4) = 1.2e-06
Identities = 20/83 (24%), Positives = 39/83 (46%)
Query: 109 SVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQ 168
S+VL+ + + ++G+ L + K ++ GF+S + +N+ Q
Sbjct: 196 SMVLQLPKTKDICSRFCQIYGLGKSQKLREINF-KYKEFELTGFISSEAHYN-KNM---Q 250
Query: 169 YFFVNDRPVDLPKVSKLVNELYK 191
+ FVN R V K+ KL++ L +
Sbjct: 251 FLFVNKRLVLRTKLHKLIDFLLR 273
Score = 51 (23.0 bits), Expect = 1.2e-06, Sum P(4) = 1.2e-06
Identities = 60/307 (19%), Positives = 125/307 (40%)
Query: 193 ANSRQYPIAIMNFIVPTRAC--DVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASY 250
+N + I ++N V + C DV + P K + F + ++L ++EG++
Sbjct: 298 SNPELHGIYVIN--VQCQFCEYDVCLEPAKTLIEFQNWDTLLICIQEGVKTFLKKEKLFV 355
Query: 251 SVNKVEQLIEPEKSGPSSGAESCMFLEQLSPDGNGCIEILNEQQISKGNTPKTVEVDTLH 310
++ E + E + S S +Q+S D C ++ ++ + N + E+ L
Sbjct: 356 ELSS-EDIKEFSEDNDFS-LFSASLQKQVSSDEK-CGQVSFQEACN--NILDSYEMFNLQ 410
Query: 311 SDALEGLVHSSNENGKGNFTLKAHDDKSADRLSKFNCMKLIGP-HNVPTEENCPSPSRVM 369
S A++ N + + + +A K+ D S K GP H E + +
Sbjct: 411 SKAVKRKAPVENISTQNSRDSEAIRKKTND--SFLYTYKSDGPAHCKMAESSLQNEDSAC 468
Query: 370 AKNITEDGESDSRSRCIQSSLNKFVTVSKRKYESIARPLTEMPLLRNQSL-HCQMKKSNS 428
+++ + E+ S ++ +K + E+ +EM Q+L H + +
Sbjct: 469 SQSRNLEQETAGASELGENKKHKKSCLEHNSSENPCGTTSEMFGSPFQTLYHFEGSGEDL 528
Query: 429 DMDAVDTR-SPVRRHLVDDIAKLNKIEPFK-CNKADKVSKEIENILSSEGNTNEKPREEL 486
++ V T + + +++++ N+ E FK + D E LS E + REE
Sbjct: 529 EIQKVSTTVNSMAANILENNRIQNQPERFKDATEMDCQPLSFETALSGEPSAQ---REEE 585
Query: 487 VTQEKAT 493
++ +T
Sbjct: 586 KRKKPST 592
Score = 45 (20.9 bits), Expect = 6.6e-05, Sum P(3) = 6.6e-05
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 449 KLNKIEPFKCNKADKVSKEIENILSSEGNTNEKPR 483
KL+K+ F K + K S + N+N +PR
Sbjct: 263 KLHKLIDFLLRKESIICKPKSGSASRQVNSNPRPR 297
Score = 43 (20.2 bits), Expect = 7.2e-06, Sum P(4) = 7.2e-06
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 364 SPSRVMAKNITEDGESDSRSRCIQSSLNKFVTVSKRKYESI 404
S SR++ + ED +D C QS + T S+ + +I
Sbjct: 1000 SLSRMLMSRV-EDSTADQNGTCFQSEESIARTCSENEESNI 1039
>UNIPROTKB|H0YJA3 [details] [associations]
symbol:MLH3 "DNA mismatch repair protein Mlh3" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030983
"mismatched DNA binding" evidence=IEA] [GO:0000795 "synaptonemal
complex" evidence=IEA] [GO:0001673 "male germ cell nucleus"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005712 "chiasma" evidence=IEA] [GO:0006298 "mismatch repair"
evidence=IEA] [GO:0007130 "synaptonemal complex assembly"
evidence=IEA] [GO:0007140 "male meiosis" evidence=IEA] [GO:0007144
"female meiosis I" evidence=IEA] [GO:0008104 "protein localization"
evidence=IEA] [GO:0019237 "centromeric DNA binding" evidence=IEA]
InterPro:IPR002099 GO:GO:0005524 GO:GO:0008104 GO:GO:0003682
GO:GO:0006298 GO:GO:0019237 GO:GO:0001673 EMBL:AL049780
GO:GO:0007140 GO:GO:0030983 GO:GO:0007130 GO:GO:0007144
GO:GO:0000795 GO:GO:0005712 PANTHER:PTHR10073 HGNC:HGNC:7128
ChiTaRS:MLH3 Ensembl:ENST00000554697 Bgee:H0YJA3 Uniprot:H0YJA3
Length = 124
Score = 116 (45.9 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 25/69 (36%), Positives = 37/69 (53%)
Query: 754 PSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTI 813
P V+ +LAS+AC +I D L E +++E L+ P+ C HGRP+M L D+ +
Sbjct: 21 PLTVQKVLASQACHGAIKFNDGLSLQESCRLIEALSSCQLPFQCAHGRPSMLPLADIDHL 80
Query: 814 R--KNIDEN 820
K I N
Sbjct: 81 EQEKQIKPN 89
>UNIPROTKB|A8JCH7 [details] [associations]
symbol:CHLREDRAFT_106832 "Predicted protein" species:3055
"Chlamydomonas reinhardtii" [GO:0000795 "synaptonemal complex"
evidence=IBA] [GO:0003697 "single-stranded DNA binding"
evidence=IBA] [GO:0005712 "chiasma" evidence=IBA] [GO:0006200 "ATP
catabolic process" evidence=IBA] [GO:0006298 "mismatch repair"
evidence=IBA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IBA] [GO:0016887 "ATPase activity" evidence=IBA]
[GO:0032300 "mismatch repair complex" evidence=IBA] [GO:0032390
"MutLbeta complex" evidence=IBA] [GO:0032407 "MutSalpha complex
binding" evidence=IBA] InterPro:IPR002099 InterPro:IPR003594
GO:GO:0005524 GO:GO:0016887 GO:GO:0006298 GO:GO:0003697
Gene3D:3.30.565.10 SUPFAM:SSF55874 GO:GO:0030983 GO:GO:0007131
GO:GO:0032407 GO:GO:0000795 GO:GO:0005712 GO:GO:0032390
PANTHER:PTHR10073 EMBL:DS496157 RefSeq:XP_001700137.1
EnsemblPlants:EDO98431 GeneID:5725681 KEGG:cre:CHLREDRAFT_106832
eggNOG:NOG304406 ProtClustDB:CLSN2703724 Uniprot:A8JCH7
Length = 86
Score = 104 (41.7 bits), Expect = 0.00014, P = 0.00014
Identities = 26/70 (37%), Positives = 39/70 (55%)
Query: 10 PTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNG 69
P +RP+ K +V +I G + + AV EL+ NSLDA A ++ I L F V D+G
Sbjct: 3 PNLRPLPKPLVDKIRTGVTLNTVPQAVVELLCNSLDAEARTVLIKLNAATLS-FTVEDDG 61
Query: 70 CGISPNNFKV 79
CGI + ++
Sbjct: 62 CGICSEDLEL 71
>UNIPROTKB|G4MRP9 [details] [associations]
symbol:MGG_04627 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] InterPro:IPR002099 InterPro:IPR003594
InterPro:IPR013507 InterPro:IPR015434 Pfam:PF01119 SMART:SM00387
Prosite:PS00058 GO:GO:0005524 GO:GO:0006298 Gene3D:3.30.565.10
SUPFAM:SSF55874 EMBL:CM001231 GO:GO:0030983 Gene3D:3.30.230.10
InterPro:IPR020568 InterPro:IPR014721 SUPFAM:SSF54211
InterPro:IPR014762 PANTHER:PTHR10073 PANTHER:PTHR10073:SF9
RefSeq:XP_003710876.1 ProteinModelPortal:G4MRP9
EnsemblFungi:MGG_04627T0 GeneID:2677851 KEGG:mgr:MGG_04627
Uniprot:G4MRP9
Length = 928
Score = 113 (44.8 bits), Expect = 0.00020, Sum P(3) = 0.00020
Identities = 27/67 (40%), Positives = 39/67 (58%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I P+ + V + A VI S VKEL++NS+DA ATSIE+ + + +V DNG G
Sbjct: 3 IAPLPQDAVRLLRAHVVISTPVSVVKELLDNSIDAKATSIEVLVSRNTVDRIEVRDNGVG 62
Query: 72 ISPNNFK 78
I +F+
Sbjct: 63 IETRDFE 69
Score = 66 (28.3 bits), Expect = 0.00020, Sum P(3) = 0.00020
Identities = 28/110 (25%), Positives = 44/110 (40%)
Query: 137 EPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPK-VSKLVNELYKGANS 195
EP C K++ + PG + +F V+ RPV + V K + +K S
Sbjct: 252 EPPDQC-GGYIKIDALVPVPGIVPVKISNKGAFFSVDSRPVSASRTVFKKIYSRFKKCIS 310
Query: 196 RQY-----------PIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHA 234
+ P +N P + DV++ P K V F+DE I+ A
Sbjct: 311 KSLEASDDGKQAKEPFIALNIKCPQGSYDVSIGPAKDDVLFTDEQGIIDA 360
Score = 45 (20.9 bits), Expect = 0.00020, Sum P(3) = 0.00020
Identities = 25/120 (20%), Positives = 50/120 (41%)
Query: 450 LNKIEPFKCNKADKVSKEIENILSSEGNTNEKPREELVTQEKATPLLNVPSIVSSSNDLK 509
L ++ P + N D E+ + L G + R E + AT SI+S ++
Sbjct: 732 LRQLSPSQQNGRD----EVPSYLLVRGR--QSLRSEPSGRSFATATAPFSSIISLGAPMQ 785
Query: 510 KNSEDLSVAASHLQFSGSILDAPVPSSSLDICSTLQFSIQDLRKRRQQRLSIMQSSCHTS 569
+++ A LQ S +D +P+ + + ++ + +RR +RL + T+
Sbjct: 786 P---EITTRAL-LQQEASRIDDDIPNHEMSFRAAMRNKSRSKSRRRSKRLKSSMLALETA 841
>FB|FBgn0035239 [details] [associations]
symbol:CG18170 species:7227 "Drosophila melanogaster"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] EMBL:AE014296 UniGene:Dm.4028 RefSeq:NP_001027097.1
RefSeq:NP_001027098.1 STRING:Q2MGL7 EnsemblMetazoa:FBtr0100190
EnsemblMetazoa:FBtr0100191 GeneID:3772196 KEGG:dme:Dmel_CG18170
UCSC:CG18170-RA FlyBase:FBgn0035239 eggNOG:NOG303534
OrthoDB:EOG44B8HG NextBio:852840 Uniprot:Q2MGL7
Length = 495
Score = 126 (49.4 bits), Expect = 0.00020, P = 0.00020
Identities = 73/282 (25%), Positives = 115/282 (40%)
Query: 293 QQISKGNTPKTVEVDTLHSDALEGLVHSSNENGK-----GNFTLKAHDDKSADRLSKFNC 347
+++S+ NTP E H + L G + N G+F + K A L K+
Sbjct: 217 RKMSQKNTPDKPEKPHKHEEILTGSRRTGNSRNNFQKKFGSFEIFMKFWKHAHALDKYK- 275
Query: 348 MKLIGPHNVPTEENCPS--PSRVMA-KNITEDGESDSRSRCIQSSLNKFVTV-SKRKYES 403
+ IGP V + + + P VM KN E G + R + NK + + SK ES
Sbjct: 276 -RHIGPVMVVKKRSKTNSKPINVMYFKNYYEKGLRLRKERLNKIKSNKKIKMPSKSPKES 334
Query: 404 IARPLTEMPLLRNQSLHCQMKKSNS-DMDAVDTRSPVRRHL--VDDIA---KLNK-IEPF 456
+A+ + E + QS H + KKS DT + + + +DDIA KL++ IEP
Sbjct: 335 VAKEIIENANIP-QS-HPETKKSTYVSKHKSDTYATLEELINDIDDIAINEKLSESIEPV 392
Query: 457 KCNKADKVSKEIENILSSEGNTNEKPREELVTQEKATPLL-NVPSIVSSSNDLKK-NSED 514
K K K K +EN + + +EK P N+PS N + K +
Sbjct: 393 KTKKDSKTPKLLENTPKKKPKNFKTALRVFKPEEKVIPKSDNMPSSNIKPNPVSKLDKSK 452
Query: 515 LSVAASHLQFSGSILDAPVPSSSLDICSTLQFSIQDLRKRRQ 556
LS + + + P + +++ LRK Q
Sbjct: 453 LSKPKTEKYIPLRVFNTPKEDEDKSWIYWDELAVKSLRKPTQ 494
>UNIPROTKB|C9JKP0 [details] [associations]
symbol:PMS1 "PMS1 protein homolog 1" species:9606 "Homo
sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0030983
"mismatched DNA binding" evidence=IEA] [GO:0006298 "mismatch
repair" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
GO:GO:0005524 GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874
EMBL:AC013468 GO:GO:0030983 PANTHER:PTHR10073 EMBL:AC008122
HGNC:HGNC:9121 ChiTaRS:PMS1 IPI:IPI00916421
ProteinModelPortal:C9JKP0 SMR:C9JKP0 STRING:C9JKP0
Ensembl:ENST00000446877 ArrayExpress:C9JKP0 Bgee:C9JKP0
Uniprot:C9JKP0
Length = 44
Score = 99 (39.9 bits), Expect = 0.00048, P = 0.00048
Identities = 19/44 (43%), Positives = 30/44 (68%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIAL 55
++ + V + + Q+I + S VKEL+ENSLDAGATS+++ L
Sbjct: 1 MKQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSVDVKL 44
>UNIPROTKB|Q5FBZ7 [details] [associations]
symbol:PMS1 "PMS1 nirs variant 3" species:9606 "Homo
sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006298
"mismatch repair" evidence=IEA] [GO:0030983 "mismatched DNA
binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR003594
GO:GO:0005524 GO:GO:0006298 Gene3D:3.30.565.10 SUPFAM:SSF55874
EMBL:AC013468 GO:GO:0030983 PANTHER:PTHR10073 EMBL:AC008122
UniGene:Hs.111749 HGNC:HGNC:9121 ChiTaRS:PMS1 EMBL:AB102871
IPI:IPI00916664 SMR:Q5FBZ7 STRING:Q5FBZ7 Ensembl:ENST00000447734
Uniprot:Q5FBZ7
Length = 47
Score = 99 (39.9 bits), Expect = 0.00048, P = 0.00048
Identities = 19/44 (43%), Positives = 30/44 (68%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIAL 55
++ + V + + Q+I + S VKEL+ENSLDAGATS+++ L
Sbjct: 1 MKQLPAATVRLLSSSQIITSVVSVVKELIENSLDAGATSVDVKL 44
>UNIPROTKB|H0YJB4 [details] [associations]
symbol:MLH3 "DNA mismatch repair protein Mlh3" species:9606
"Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006298
"mismatch repair" evidence=IEA] [GO:0030983 "mismatched DNA
binding" evidence=IEA] InterPro:IPR002099 InterPro:IPR014790
Pfam:PF08676 SMART:SM00853 GO:GO:0005524 GO:GO:0006298
EMBL:AL049780 GO:GO:0030983 PANTHER:PTHR10073 HGNC:HGNC:7128
ChiTaRS:MLH3 Ensembl:ENST00000553713 Uniprot:H0YJB4
Length = 477
Score = 123 (48.4 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 55/205 (26%), Positives = 89/205 (43%)
Query: 636 LFIVDQHAADEKYNFERLSQSTVLNQQP------------LLRPLKLDLTPEEE-VVASM 682
L +VDQHAA E+ E+L + QQ L+ PL++ +T E+ ++
Sbjct: 243 LVLVDQHAAHERIRLEQLIIDSYEKQQAQGSGRKKLLSSTLIPPLEITVTEEQRRLLWCY 302
Query: 683 HM---DIIRKNGFSLEEDPHALAGLRFRLKAVPF-SKKITFGVEDV-KDLISTLADNQGE 737
H D+ + F D L G + L V + ++ G V K ++ Q E
Sbjct: 303 HKNLEDLGLEFVFPDTSDSLVLVG-KVPLCFVEREANELRRGRSTVTKSIVEEFIREQLE 361
Query: 738 CSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNC 797
++ + P V+ +LAS+AC +I D L E +++E L+ P+ C
Sbjct: 362 --LLQT--TGGIQGTLPLTVQKVLASQACHGAIKFNDGLSLQESCRLIEALSSCQLPFQC 417
Query: 798 PHGRPTMRHLVDLTTIR--KNIDEN 820
HGRP+M L D+ + K I N
Sbjct: 418 AHGRPSMLPLADIDHLEQEKQIKPN 442
Score = 44 (20.5 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 12/29 (41%), Positives = 13/29 (44%)
Query: 364 SPSRVMAKNITEDGESDSRSRCIQSSLNK 392
SPS M N ED D C QS +K
Sbjct: 57 SPSG-MLMNPVEDATGDQNGICFQSEESK 84
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.132 0.378 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 824 804 0.00098 121 3 11 22 0.42 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 128
No. of states in DFA: 617 (66 KB)
Total size of DFA: 375 KB (2184 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 82.09u 0.20s 82.29t Elapsed: 00:00:04
Total cpu time: 82.12u 0.21s 82.33t Elapsed: 00:00:04
Start: Fri May 10 14:03:33 2013 End: Fri May 10 14:03:37 2013
WARNINGS ISSUED: 1