BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041466
(824 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|147768838|emb|CAN75888.1| hypothetical protein VITISV_023640 [Vitis vinifera]
Length = 3804
Score = 979 bits (2532), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 532/902 (58%), Positives = 630/902 (69%), Gaps = 90/902 (9%)
Query: 1 MDVETPTNSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGE 60
M+ + SPTIR INKG VHRIC+GQVI DLSSAVKELVENSLDAGATSIEIALKEYG+
Sbjct: 2757 MEGAAQSESPTIRAINKGAVHRICSGQVILDLSSAVKELVENSLDAGATSIEIALKEYGQ 2816
Query: 61 EWFQVVDNGCGISPNNFKVRAV-------------------------------------- 82
EWFQV+DNGCGI PNNFK+ V
Sbjct: 2817 EWFQVIDNGCGIXPNNFKLTMVDMMIVVGWKSWNLEVVELDGDGAGVILRLQYWEAGKDR 2876
Query: 83 -----FLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLE 137
+ +AYALIA GVR VCTNTTGKNVKS+VLKTQGS SLKDNIITVFGMN +NCLE
Sbjct: 2877 GGGRVAMVEAYALIAGGVRLVCTNTTGKNVKSMVLKTQGSGSLKDNIITVFGMNTFNCLE 2936
Query: 138 PVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQ 197
P+ IC SDS KV+GF+SK G GSGR LGDRQ+FFVN RPVD+PKV KLVNELYKGANSRQ
Sbjct: 2937 PLNICLSDSSKVDGFVSKSGYGSGRTLGDRQFFFVNGRPVDMPKVGKLVNELYKGANSRQ 2996
Query: 198 YPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASYSVNKVEQ 257
YPIAIMNF VPTRA DVNVTPDKRK+FFSDE SILH+LREGL++IYSP+ SYSVN+ E+
Sbjct: 2997 YPIAIMNFTVPTRAYDVNVTPDKRKIFFSDEGSILHSLREGLEKIYSPSLTSYSVNRFEE 3056
Query: 258 LIEPEKSGPSSGAESCMFL--EQLSPDGNGCI-EILNEQQISKGNTP-KTVEVDTLHSDA 313
E + + ++ + +QL PDG+ E +E+QI++ P K V+ T + A
Sbjct: 3057 PTEETBNSELNPPQTQILXSSKQLFPDGSDLQEEAHSEEQITEDQIPSKMVKSSTENMHA 3116
Query: 314 LEGLVHSSNENG-KGNFTLKAHDDKSADRLSKFNCMKLIGPHNVPT-EENCPSPSRVMAK 371
++ + HS +++ + +F+L+ H K AD K++ K N T + S S ++ K
Sbjct: 3117 VKEMDHSYDKDSIEKDFSLRVHGIKKADSFPKWDSEKTTMTINSDTIDHQVLSLSEMVVK 3176
Query: 372 NITEDGESDSRSRCIQS---------------SLNKFVTVSKRKYESIARPLTEMPLLRN 416
+ S S S IQS SL+KFVTV+KRK+E+I+ L+E PLLRN
Sbjct: 3177 GAVGNKGSSSHSSYIQSFGNKGSSSHSSYFQSSLSKFVTVNKRKHENISTVLSEAPLLRN 3236
Query: 417 QSLHCQMKKSNSDMDAVDTRSPVRRHLVDDIAKLNKIEPFKCNKADKVSKEIENILSSEG 476
Q+ +CQ+KK+NS+M A+ +RS V +D A + + EP K D EN S G
Sbjct: 3237 QTPNCQLKKNNSEMHALVSRSFVNHQKTNDSAGIIESEPSKFLGVDSAFDATENPHYSGG 3296
Query: 477 NTN-EKPREELVTQEKATPLLNVPSIVSSSNDLKKNSEDLSVAASHLQFSGSILDAPVPS 535
N N EK E+L E P +V + S S + KN DLS AS +Q + +LD P+PS
Sbjct: 3297 NINDEKAGEDLENHETPLPPADVATTASLSEE--KNISDLSXVASAVQDT-PVLDTPMPS 3353
Query: 536 SSLDICSTLQFSIQDLRKRRQQRLSIMQSSCHTSGSVKMRRCFAAATLELSQPENEERKA 595
S L ICSTLQFS ++LR RR QRLS +QSS + G RC++AATLE SQPENEERK
Sbjct: 3354 SDLKICSTLQFSFEELRTRRHQRLSRLQSSSYKCGRTTTERCYSAATLEFSQPENEERKV 3413
Query: 596 RALAAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQ 655
RALAAATTELE+LF+K+DFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFE L+Q
Sbjct: 3414 RALAAATTELEKLFKKQDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFEHLAQ 3473
Query: 656 STVLNQQPLLR----------------------PLKLDLTPEEEVVASMHMDIIRKNGFS 693
STVLNQQPLLR PL+LDL+PEEEV+A +HMDIIRKNGF+
Sbjct: 3474 STVLNQQPLLRYGVQNIHEVTSIELLCVSYTIGPLRLDLSPEEEVIAFIHMDIIRKNGFA 3533
Query: 694 LEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVC 753
LEED HA G RF+LKAVPFSK ITFGVEDVK+LISTLAD QGECSI+ +YKMDT DS+C
Sbjct: 3534 LEEDLHAPPGQRFKLKAVPFSKNITFGVEDVKELISTLADGQGECSILGTYKMDTCDSIC 3593
Query: 754 PSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTI 813
PSRVRAMLASRACRSS+MIGD LGR EMQ+ILEHL+DL SPWNCPHGRPTMRHLVDLTTI
Sbjct: 3594 PSRVRAMLASRACRSSVMIGDPLGRKEMQRILEHLSDLKSPWNCPHGRPTMRHLVDLTTI 3653
Query: 814 RK 815
K
Sbjct: 3654 YK 3655
>gi|255564118|ref|XP_002523056.1| DNA mismatch repair protein pms2, putative [Ricinus communis]
gi|223537618|gb|EEF39241.1| DNA mismatch repair protein pms2, putative [Ricinus communis]
Length = 924
Score = 912 bits (2357), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 482/748 (64%), Positives = 584/748 (78%), Gaps = 11/748 (1%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
+ + L AYALIAKGVR +CTNTTG+N K VVLKTQG+ SLKDNIITVFGM+ ++CLEPV
Sbjct: 177 KLISLLNAYALIAKGVRLLCTNTTGRNAKIVVLKTQGTDSLKDNIITVFGMSTFSCLEPV 236
Query: 140 AICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQYP 199
+IC SD CKV+GFLSKPGQGSGRNLGDRQY+FVN RPVD+PKV+KLVNELY+GANSRQYP
Sbjct: 237 SICISDCCKVDGFLSKPGQGSGRNLGDRQYYFVNGRPVDMPKVTKLVNELYRGANSRQYP 296
Query: 200 IAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASYSVNKVEQLI 259
IAIMNFIVPTRACDVNVTPDKRK+FFSDE SILHALREGLQ IYSP+NASYSVNK E+ I
Sbjct: 297 IAIMNFIVPTRACDVNVTPDKRKIFFSDETSILHALREGLQNIYSPSNASYSVNKFEERI 356
Query: 260 EPEKSGPSSGA--ESCMFLEQLSPDGNGCIEILNEQQISKG-NTPKTVEVDTLHSDALEG 316
+ + S +S + +QLS N EIL E+ S G N +TV++ + S+ E
Sbjct: 357 KAASNSQSCSPHEKSLVLSKQLSAVSNDAEEILVEEHTSDGSNLLQTVKMKSHPSNVGE- 415
Query: 317 LVHSSNENGKGNFTLKAHDDKSADRLSKFNCMKLIGPHNVPTEENCPSPSRVMAKNITED 376
+ + +FTL+ HD N +L H+ T++N PSPSRV+AKNI E
Sbjct: 416 --NRDEKRISKDFTLRVHDIPKVYSFPNSNNRQLTTLHDTLTDQNTPSPSRVVAKNIAES 473
Query: 377 GESDSRSRCIQSSLNKFVTVSKRKYESIARP-LTEMPLLRNQSLHCQMKKSNSDMDAVDT 435
S+S SR +QS+++KFVTVSKRK++ I+ L+E+P+LRNQ+L + KSNS+++A T
Sbjct: 474 RGSNSSSRSVQSTISKFVTVSKRKHDDISTTTLSEIPILRNQTLQRPLNKSNSEVNAAVT 533
Query: 436 RSPVRRHLVDDIAKLNKIEPFKCNKADKVSKEIENILSSEGNTNE-KPREELVTQEKATP 494
SP H +DD +++ IE K A+K+ ++ N S G+TN+ KP+++ EK +
Sbjct: 534 GSPFNHHHIDDSLEVSDIEVSKFPTAEKIFSKVRNSASYRGHTNDGKPKDDSEGAEKLSF 593
Query: 495 LLNVPSIVSSSNDLKKNSEDLSVAASHLQFSGSILDAPVPSSSLDICSTLQFSIQDLRKR 554
+ +V S S L+ SEDL + A LQ S ++LD P PS+ +ICSTLQF+ Q+L+ +
Sbjct: 594 IADVAPDTSPSRGLENMSEDLILTAPPLQSSSALLDVPKPSAH-EICSTLQFNFQELKAK 652
Query: 555 RQQRLSIMQSSCHTSGSVKMR--RCFAAATLELSQPENEERKARALAAATTELERLFRKE 612
RQQR SI+Q S + SG +KM+ R +AAATLELSQP+NEERKARALAAATTELER+FRK+
Sbjct: 653 RQQRRSILQFSGYASGGMKMKSHRTYAAATLELSQPDNEERKARALAAATTELERIFRKQ 712
Query: 613 DFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDL 672
DFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFE L QST+LNQQPLLR L+L+L
Sbjct: 713 DFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFEHLCQSTILNQQPLLRSLRLEL 772
Query: 673 TPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLA 732
+PEEEVVASM+M++IRKNGF+LEEDPHA G RF+LKAVPFSK ITFGVEDVKDLISTLA
Sbjct: 773 SPEEEVVASMNMELIRKNGFALEEDPHAPPGHRFKLKAVPFSKNITFGVEDVKDLISTLA 832
Query: 733 DNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLN 792
D+QG+CSII SYKMD +DSVCPSRVR MLASRACRSS+MIGD LGRNEMQKILEHLADLN
Sbjct: 833 DSQGDCSIIGSYKMDKSDSVCPSRVRTMLASRACRSSVMIGDPLGRNEMQKILEHLADLN 892
Query: 793 SPWNCPHGRPTMRHLVDLTTIRKNIDEN 820
SPWNCPHGRPTMRHLVD+T+I K EN
Sbjct: 893 SPWNCPHGRPTMRHLVDMTSIYKRSYEN 920
Score = 139 bits (350), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 64/76 (84%), Positives = 72/76 (94%)
Query: 7 TNSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVV 66
+NSP I+PINKGVVHRICAGQVI DLSSAVKELVENSLDAGATSIEI+LK+YGE+ FQV+
Sbjct: 4 SNSPIIKPINKGVVHRICAGQVILDLSSAVKELVENSLDAGATSIEISLKDYGEDSFQVI 63
Query: 67 DNGCGISPNNFKVRAV 82
DNGCG+SPNNFKV A+
Sbjct: 64 DNGCGVSPNNFKVLAL 79
>gi|224131150|ref|XP_002321013.1| predicted protein [Populus trichocarpa]
gi|222861786|gb|EEE99328.1| predicted protein [Populus trichocarpa]
Length = 915
Score = 843 bits (2178), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/749 (62%), Positives = 546/749 (72%), Gaps = 15/749 (2%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
+ + L AYALI+KGVR VC+NTTGKN KSVVLKTQGS SLKDNIITVFG+N ++CLEPV
Sbjct: 176 KLISLLNAYALISKGVRIVCSNTTGKNAKSVVLKTQGSDSLKDNIITVFGVNTFSCLEPV 235
Query: 140 AICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQYP 199
I S SCKVEGFLSK GQGSGRNLGDRQY+FVN RPVD+PKVSKLVNELYKGANSRQYP
Sbjct: 236 DIDISGSCKVEGFLSKSGQGSGRNLGDRQYYFVNGRPVDMPKVSKLVNELYKGANSRQYP 295
Query: 200 IAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASYSVNKVEQLI 259
IAIMNF +PT ACDVNVTPDKRK+FFSDE SIL ALREGL++ YS +N+ YSVNK E
Sbjct: 296 IAIMNFTIPTTACDVNVTPDKRKIFFSDESSILLALREGLEKNYSSSNSCYSVNKFENHA 355
Query: 260 EPEKSGP--SSGAESCMFLEQLSPDGNGCIEILNEQQISKGNTP-KTVEVDTLHSDALEG 316
+ S S +S M +Q S +GN E Q ++ ++P TVEV + E
Sbjct: 356 KAADSSQLCSPREKSNMLSKQSSANGNDSEET---QTDAEDSSPLMTVEVKSKPFQVGER 412
Query: 317 LVHSSNEN-GKGNFTLKAHDDKSADRLSKFNCMKLIGPHNVPTEENCPSPSRVMAKNITE 375
+H E +F L+ H K D L+ N K N+ T++N PSRV+ +
Sbjct: 413 SIHDIEEKFMMKDFALRLHGIKKTDSLTNSNSCKATTHLNIVTDQNAQCPSRVVER---V 469
Query: 376 DGESDSRSRCIQSSLNKFVTVSKRKYESIARPLTEMPLLRNQSLHCQMKKSNSDMDAVDT 435
G+S+ S QS L+ F+TV+KRK E I L+E+P+LRNQ+ CQ+KKS+ D+ T
Sbjct: 470 KGDSNGPSGSFQSKLSNFLTVNKRKREDITTQLSEVPVLRNQTSECQLKKSDIDIHDAVT 529
Query: 436 RSPVRRHLVDDIAKLNKIEPFKCNKADKVSKEIENILSSEGNTNEKPREELVTQEKATPL 495
H +DD + EP K + D + + N + E P E Q ++P
Sbjct: 530 SLLFNHHHIDDSTEFTDAEPPKHHSTDVIINKTRNNSGLQPKLAEDPSGE---QNSSSPD 586
Query: 496 LNVPSIVSSSNDLKKNSEDLSVAASHLQFSGSILDAPVPSSSLDICSTLQFSIQDLRKRR 555
+VPSI + L EDL VA+ Q S +LDAPVP S+ ICSTLQFS QDL RR
Sbjct: 587 -DVPSITTPCKGLGNLLEDLPVASPPAQSSIELLDAPVPFSAQQICSTLQFSFQDLHSRR 645
Query: 556 QQRLSIMQSSCHT-SGSVKMRRCFAAATLELSQPENEERKARALAAATTELERLFRKEDF 614
QRLS +QS T GS + R +AAATLELSQP+NEERK RALAAATTELERLFRKEDF
Sbjct: 646 MQRLSRLQSGKFTFGGSKRSHRSYAAATLELSQPDNEERKLRALAAATTELERLFRKEDF 705
Query: 615 GRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTP 674
GRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERL QST+LNQQPLLRPL+L+L+P
Sbjct: 706 GRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLCQSTILNQQPLLRPLRLELSP 765
Query: 675 EEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADN 734
EEEVVASM++DIIRKNGF+LEEDPHAL G F+LKAVPFSK ITFGVEDVKDLISTLAD+
Sbjct: 766 EEEVVASMNLDIIRKNGFALEEDPHALPGHHFKLKAVPFSKNITFGVEDVKDLISTLADS 825
Query: 735 QGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSP 794
QGECSIIS YKMDTADSVCPSRV AM ASRACRSS+MIGDALGRNEMQKILEHL DL SP
Sbjct: 826 QGECSIISRYKMDTADSVCPSRVHAMFASRACRSSVMIGDALGRNEMQKILEHLVDLKSP 885
Query: 795 WNCPHGRPTMRHLVDLTTIRKNIDENGAG 823
WNCPHGRPTMRHL+D+++I + DE AG
Sbjct: 886 WNCPHGRPTMRHLIDMSSIYERPDETEAG 914
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 61/72 (84%), Positives = 66/72 (91%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
TIRPINK VHRICAGQVI DLSSAVKELVENSLDAGATSIEI+LK+YG E FQV+DNGC
Sbjct: 7 TIRPINKAAVHRICAGQVILDLSSAVKELVENSLDAGATSIEISLKDYGLESFQVIDNGC 66
Query: 71 GISPNNFKVRAV 82
G+SPNNFKV A+
Sbjct: 67 GVSPNNFKVLAL 78
>gi|225437328|ref|XP_002267393.1| PREDICTED: mismatch repair endonuclease PMS2-like [Vitis vinifera]
Length = 937
Score = 834 bits (2155), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/758 (60%), Positives = 551/758 (72%), Gaps = 43/758 (5%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
+ + L AYALIA GVR VCTNTTGKNVKS+VLKTQGS SLKDNIITVFGMN +NCLEP+
Sbjct: 180 KLISLLSAYALIAGGVRLVCTNTTGKNVKSMVLKTQGSGSLKDNIITVFGMNTFNCLEPL 239
Query: 140 AICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQYP 199
IC SDS KV+GF+SK G GSGR LGDRQ+FFVN RPVD+PKV KLVNELYKGANSRQYP
Sbjct: 240 NICLSDSSKVDGFVSKSGYGSGRTLGDRQFFFVNGRPVDMPKVGKLVNELYKGANSRQYP 299
Query: 200 IAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASYSVNKVEQLI 259
IAIMNF VPTRA DVNVTPDKRK+FFSDE SILH+LREGL++IYSP+ SYSVN+ E+
Sbjct: 300 IAIMNFTVPTRAYDVNVTPDKRKIFFSDEGSILHSLREGLEKIYSPSLTSYSVNRFEEPT 359
Query: 260 EPEKSGPSSGAESCMFL--EQLSPDGNGCIE-ILNEQQISKGNTP-KTVEVDTLHSDALE 315
E + + ++ + +QL PDG+ E +E+QI++ P K V+ T + A++
Sbjct: 360 EETDNSELNPPQTQILSSSKQLFPDGSDLQEEAHSEEQITEDQIPSKMVKSSTENMHAVK 419
Query: 316 GLVHSSNENG-KGNFTLKAHDDKSADRLSKFNCMKLIGPHNVPT-EENCPSPSRVMAKNI 373
+ HS +++ + +F+L+ H K AD K++ K N T + S S ++ K
Sbjct: 420 EMDHSYDKDSIEKDFSLRVHGIKKADSFPKWDSEKTTMTINSDTIDHQVLSLSEMVVKGA 479
Query: 374 TEDGESDSRSRCIQS---------------SLNKFVTVSKRKYESIARPLTEMPLLRNQS 418
+ S S S IQS SL+KFVTV+KRK+E+I+ L+E PLLRNQ+
Sbjct: 480 VGNKGSSSHSSYIQSFGNKGSSSHSSYFQSSLSKFVTVNKRKHENISTVLSEAPLLRNQT 539
Query: 419 LHCQMKKSNSDMDAVDTRSPVRRHLVDDIAKLNKIEPFKCNKADKVSKEIENILSSEGNT 478
+CQ+KK+NS+M A+ +RS V +D A + + EP K D EN S GN
Sbjct: 540 PNCQLKKNNSEMHALVSRSFVNHQKTNDSAGIIESEPSKFLGVDSAFDATENPHYSGGNI 599
Query: 479 N-EKPREELVTQEKATPLLNVPSIVSSSNDLKKNSEDLSVAASHLQFSGSILDAPVPSSS 537
N EK E+L E P +V + S S + KN DLS AS +Q +LD P+PSS
Sbjct: 600 NDEKAGEDLENHETPLPPADVATTASLSEE--KNISDLSGVASAVQ-DTPVLDTPMPSSD 656
Query: 538 LDICSTLQFSIQDLRKRRQQRLSIMQSSCHTSGSVKMRRCFAAATLELSQPENEERKARA 597
L ICSTLQFS ++LR RR QR C++AATLE SQPENEERK RA
Sbjct: 657 LKICSTLQFSFEELRTRRHQR------------------CYSAATLEFSQPENEERKVRA 698
Query: 598 LAAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQST 657
LAAATTELE+LF+K+DFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFE L+QST
Sbjct: 699 LAAATTELEKLFKKQDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFEHLAQST 758
Query: 658 VLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKI 717
VLNQQPLLRPL+LDL+PEEEV+AS+HMDIIRKNGF+LEED HA G RF+LKAVPFSK I
Sbjct: 759 VLNQQPLLRPLRLDLSPEEEVIASIHMDIIRKNGFALEEDLHAPPGQRFKLKAVPFSKNI 818
Query: 718 TFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALG 777
TFGVEDVK+LISTLAD QGECSI+ +YKMDT DS+CPSRVRAMLASRACRSS+MIGD LG
Sbjct: 819 TFGVEDVKELISTLADGQGECSILGTYKMDTCDSICPSRVRAMLASRACRSSVMIGDPLG 878
Query: 778 RNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRK 815
R EMQ+ILEHL+DL SPWNCPHGRPTMRHLVDLTTI K
Sbjct: 879 RKEMQRILEHLSDLKSPWNCPHGRPTMRHLVDLTTIYK 916
Score = 144 bits (362), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/82 (81%), Positives = 73/82 (89%)
Query: 1 MDVETPTNSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGE 60
M+ + SPTIR INKG VHRIC+GQVI DLSSAVKELVENSLDAGATSIEIALKEYG+
Sbjct: 1 MEGAAQSESPTIRAINKGAVHRICSGQVILDLSSAVKELVENSLDAGATSIEIALKEYGQ 60
Query: 61 EWFQVVDNGCGISPNNFKVRAV 82
EWFQV+DNGCGISPNNFKV A+
Sbjct: 61 EWFQVIDNGCGISPNNFKVLAL 82
>gi|356502864|ref|XP_003520235.1| PREDICTED: mismatch repair endonuclease PMS2-like [Glycine max]
Length = 1036
Score = 794 bits (2051), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/778 (57%), Positives = 546/778 (70%), Gaps = 51/778 (6%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
+ V L AYALIAKGVRFVCTNTTGKNV+SVVLKTQGS SLKDN+ITV GMN ++CLEPV
Sbjct: 176 KLVSLLNAYALIAKGVRFVCTNTTGKNVRSVVLKTQGSGSLKDNVITVLGMNTFSCLEPV 235
Query: 140 AICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQYP 199
+ SDSCKVEGFLSK GQG+GRNLGDRQYFFVN RPVD+PKVSKLVNELYKGANS+QYP
Sbjct: 236 TLSISDSCKVEGFLSKSGQGNGRNLGDRQYFFVNGRPVDMPKVSKLVNELYKGANSKQYP 295
Query: 200 IAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASYSVNKVEQLI 259
IAI+NF VPTR DVNVTPDKRK+FFS+E +IL ALREGLQ+IYS +N YSVN+V
Sbjct: 296 IAILNFTVPTRVYDVNVTPDKRKIFFSEENAILQALREGLQQIYSASNVCYSVNEVMLPA 355
Query: 260 EPEK-------SGPS-------SGAESCMFLEQLSPDGNGCIEI---------------- 289
E E+ G S S SC EQ S NG + +
Sbjct: 356 EKEECVELCSSHGKSPIVRKLYSPNASCPQKEQCSESNNGSVSLDEIDTECNNDTISQDE 415
Query: 290 LNEQQI--SKGNTPKTVEVDTLHSDALEGLVHSSNENGKGN--FTLKAHD-DKSADRLSK 344
E+ I SK + E H D EGL+ N+ N FTL+AH K D S+
Sbjct: 416 HEEKHITDSKNASESINEYRYTHID--EGLI-CENDGSLMNQEFTLRAHSASKDDDSGSR 472
Query: 345 FNCMKLIGPHNVPTEENCPSPSRVMAKNITEDGESDSRSRCIQSSLNKFVTVSKRKYESI 404
C I P + SR + T S + SR +QS+LN FV+V+KR +S+
Sbjct: 473 SACPSSIIP------DQATLVSRTVESGSTSSKYSFNHSRHVQSTLNNFVSVNKRNRDSV 526
Query: 405 ARPLTEMPLLRNQSLHCQMKKSNSDMDAVDTRSPVRRHLVDDIAKLNKIEPFKCNKADKV 464
R L+E+P+LRNQ+ HCQ+K +N++ + TRS + D+ A+ ++IE K D V
Sbjct: 527 IRALSEVPVLRNQAPHCQLKTANTETQDLITRSSLCFDQSDEPARASEIESLKQLNPDNV 586
Query: 465 SKEIENILSSEGNTN-EKPREEL-VTQEKATPLLNVPSIVSSSNDLKKNSEDLSVAASHL 522
+ EN +S +G+++ +P+ + + + TPL + SI SS D+ + D+ + L
Sbjct: 587 FYKNENAVSFKGDSSVREPKSNMELDLKNNTPLGDTASITPSSIDMI--TTDVLASDPPL 644
Query: 523 QFSGSILDAPVPSSSLDICSTLQFSIQDLRKRRQQRLSIMQSSCHTSGSVKMRRCFAAAT 582
S L++ SSS ICS +QFS Q+L+KRR++RLS++QSS G K++ ++AAT
Sbjct: 645 HSSPVWLNS-CKSSSNKICSNMQFSFQELKKRREKRLSLLQSSKFGCGKAKVKSHYSAAT 703
Query: 583 LELSQPENEERKARALAAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQH 642
LE+ Q E E+K RALAAA TELER F+KEDF RMKVIGQFNLGFII KLDQDLFIVDQH
Sbjct: 704 LEILQSEIGEQKERALAAAATELERFFKKEDFSRMKVIGQFNLGFIICKLDQDLFIVDQH 763
Query: 643 AADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALA 702
AADEKYNFERLSQST+LNQQPLLRP+KL+L+PEEE+VASMHMDIIRKNGF+LEEDP+A
Sbjct: 764 AADEKYNFERLSQSTILNQQPLLRPIKLELSPEEEIVASMHMDIIRKNGFTLEEDPNAPP 823
Query: 703 GLRFRLKAVPFSKKITFGVEDVKDLISTLADNQG--ECSIISSYKMDTADSVCPSRVRAM 760
G RF+LK+VPFSK FG+EDVK+LIS L+D G ECSI+ SYK+DT+DSVCPSRVRAM
Sbjct: 824 GCRFKLKSVPFSKNTMFGIEDVKELISILSDGDGHVECSIVGSYKLDTSDSVCPSRVRAM 883
Query: 761 LASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKNID 818
LASRACRSSIM+GDALGRNEMQKILEH+A+L SPWNCPHGRPTMRHLVDLT I K+ +
Sbjct: 884 LASRACRSSIMVGDALGRNEMQKILEHMAELKSPWNCPHGRPTMRHLVDLTKIHKSYE 941
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/71 (84%), Positives = 68/71 (95%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+PI KG+VHRICAGQVI DLSSAVKELVENSLDAGATSIEI+LK++GE+WFQV+DNGCG
Sbjct: 8 IKPIGKGIVHRICAGQVILDLSSAVKELVENSLDAGATSIEISLKDFGEQWFQVIDNGCG 67
Query: 72 ISPNNFKVRAV 82
ISPNNFKV A+
Sbjct: 68 ISPNNFKVLAL 78
>gi|356536725|ref|XP_003536886.1| PREDICTED: mismatch repair endonuclease PMS2-like [Glycine max]
Length = 944
Score = 786 bits (2029), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/773 (56%), Positives = 546/773 (70%), Gaps = 53/773 (6%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
+ V L AYALIAKGVRFVCTNTTGKNV+SVVLKTQGS SLKDNIITV GMN ++CLEPV
Sbjct: 176 KLVSLLNAYALIAKGVRFVCTNTTGKNVRSVVLKTQGSGSLKDNIITVLGMNTFSCLEPV 235
Query: 140 AICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQYP 199
+ SDSCKVEGFLSK GQG+GRNL DRQYFFVN RPVD+PKVSK+VNELY+GANS+QYP
Sbjct: 236 TLSISDSCKVEGFLSKSGQGNGRNLVDRQYFFVNGRPVDMPKVSKVVNELYRGANSKQYP 295
Query: 200 IAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASYSVNKVEQLI 259
I I+NF VPTR DVNVTPDKRK+FFS+E ++L ALREGLQ+IYS +N YSVN+V
Sbjct: 296 IVILNFTVPTRTYDVNVTPDKRKIFFSEENALLQALREGLQQIYSASNVCYSVNEVVLPA 355
Query: 260 EPEKSGP--SSGAESCMFLEQLSPDG------------NGCIEI---------------- 289
E E SS +S + ++ LSP+G NG I +
Sbjct: 356 EKEACVELCSSHGKSPIVMKLLSPNGSRPQKEQCSESNNGSISLDEINAECNNDTISQDE 415
Query: 290 LNEQQISKGNTPKTVEVDTLHSDALEGLVHSSNEN-GKGNFTLKAH----DDKSADRLSK 344
E+ I+ + L+SD EGL+ ++ N FTL+AH DD S + +
Sbjct: 416 HEEKHITHSKNASESINEYLYSDVDEGLIRENDGNLMNQEFTLRAHCASKDDNSGRQSA- 474
Query: 345 FNCMKLIGPHNVPTEENCPSPSRVMAKNITEDGESDSRSRCIQSSLNKFVTVSKRKYESI 404
P ++ ++ SR + + S + SR +QS+LN FV+V+KR +S+
Sbjct: 475 -------SPSSIIPDQTTLV-SRTVESGSSSSKYSFNHSRHVQSTLNNFVSVNKRNRDSV 526
Query: 405 ARPLTEMPLLRNQSLHCQMKKSNSDMDAVDTRSPVRRHLVDDIAKLNKIEPFKCNKADKV 464
R L+E+P+LRN HCQ+K +N++ + TRS + D++A+ ++IE K D V
Sbjct: 527 IRALSEVPVLRNP--HCQLKTANTETHDLITRSSLCFDQCDELARASEIEALKQLNPDNV 584
Query: 465 SKEIENILSSEGNTNEK-PREEL-VTQEKATPLLNVPSIVSSSNDLKKNSEDLSVAASHL 522
+ EN +S +G+++++ P+ + + + TP+ + SI SS D+ + D+ + L
Sbjct: 585 FHKNENSVSFKGDSSDREPKSNMELDLKNNTPIGDTASINPSSIDMI--TADVFASDPPL 642
Query: 523 QFSGSILDAPVPSSSLDICSTLQFSIQDLRKRRQQRLSIMQSSCHTSGSVKMRRCFAAAT 582
S LD+ SS ICS +QFS Q+L+KRR++RLS++QSS G K++ C++ AT
Sbjct: 643 HSSSVRLDSS-KSSRKKICSNMQFSFQELKKRREKRLSLLQSSKFGCGKAKVKSCYSDAT 701
Query: 583 LELSQPENEERKARALAAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQH 642
LELS+ E E+K RALAAA TELER F+KEDF RMKVIGQFNLGFII KLDQDLFIVDQH
Sbjct: 702 LELSRSEIAEQKERALAAAATELERFFKKEDFSRMKVIGQFNLGFIICKLDQDLFIVDQH 761
Query: 643 AADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALA 702
AADEKYNFERLSQST+LNQQPLLRP+KL+L+PEEE+VASMHMDIIRKNGF+LEEDP+A
Sbjct: 762 AADEKYNFERLSQSTILNQQPLLRPIKLELSPEEEIVASMHMDIIRKNGFTLEEDPNAPP 821
Query: 703 GLRFRLKAVPFSKKITFGVEDVKDLISTLADNQG--ECSIISSYKMDTADSVCPSRVRAM 760
G RF+LK+VPFSK FG+EDVK+LIS L+D G ECSI+ SYK+DT+DSVCPSRVRAM
Sbjct: 822 GCRFKLKSVPFSKNTMFGIEDVKELISILSDGDGHVECSIVGSYKLDTSDSVCPSRVRAM 881
Query: 761 LASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTI 813
LASRACRSSIM+GDALGRNEMQKILEH+A+L SPWNCPHGRPTMRHLVDLT I
Sbjct: 882 LASRACRSSIMVGDALGRNEMQKILEHMAELKSPWNCPHGRPTMRHLVDLTKI 934
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/71 (84%), Positives = 68/71 (95%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+PI KG+VHRICAGQVI DLSSAVKELVENSLDAGATSIEI+LK++GE+WFQV+DNGCG
Sbjct: 8 IKPIGKGIVHRICAGQVILDLSSAVKELVENSLDAGATSIEISLKDFGEQWFQVIDNGCG 67
Query: 72 ISPNNFKVRAV 82
ISPNNFKV A+
Sbjct: 68 ISPNNFKVLAL 78
>gi|357442547|ref|XP_003591551.1| DNA mismatch repair protein [Medicago truncatula]
gi|355480599|gb|AES61802.1| DNA mismatch repair protein [Medicago truncatula]
Length = 933
Score = 783 bits (2023), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/766 (55%), Positives = 528/766 (68%), Gaps = 54/766 (7%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICK 143
L AYALIAKGVRF CTNTTGKNVKSVVLKTQG+ SLKDNIITV GMN +NCLEP+++C
Sbjct: 180 LLNAYALIAKGVRFGCTNTTGKNVKSVVLKTQGNDSLKDNIITVLGMNTFNCLEPMSLCI 239
Query: 144 SDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQYPIAIM 203
S+SCKV+GFLSKPG G+GRNLGDRQYFFVN RPVD+PK+ KLVNELY+ ANS+QYPIAIM
Sbjct: 240 SESCKVDGFLSKPGLGNGRNLGDRQYFFVNGRPVDMPKIGKLVNELYRSANSKQYPIAIM 299
Query: 204 NFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASYSVNKV------EQ 257
NF VPT+A DVNVTPDKRK+FFS+E S+L ALREGLQ+IYSP+NASY+VN+ E
Sbjct: 300 NFTVPTKAYDVNVTPDKRKIFFSEETSLLQALREGLQQIYSPDNASYAVNEFMRPAAKED 359
Query: 258 LIE---------------------PEKSGPSSGAESCMFLEQLSPDGNGCIEILNEQQ-- 294
E P++ + + + ++ + D NG LNE +
Sbjct: 360 CFELRSSQKKSPIVTKPASLNVAIPQEEHYTEFNTASISRDKNNSDRNGGSISLNEHKEK 419
Query: 295 -ISKGNTPKTVEVDTLHSDALEGLVHSSNENGKGN-FTLKAHDDKSADRLSKFNCMKLIG 352
+ N + L S EGL+ S G FTL+AH D+ + I
Sbjct: 420 HTTDSNNASESDDGDLFSHVEEGLIRESGGGLMGKEFTLRAHKTLKGDKSGRQMASTHIA 479
Query: 353 PHNVPTEENCPSPSRVMAKNITEDGESDSRSRCIQSSLNKFVTVSKRKYESIARPLTEMP 412
N T SR + + D S SR +QS+LN FV VSKRK + I L+E+P
Sbjct: 480 LRNQAT-----LVSRTVESGGSSDKYSSDSSRHVQSTLNNFVAVSKRKRDDIITALSEVP 534
Query: 413 LLRNQSLHCQMKKSNSDMDAVDTRSPVRRHLVDDIAKLNKIEPFKCNKADKVSKEIENIL 472
+LRNQ+ C++K N++ + + TRS + +++ + ++IE + D ++ N L
Sbjct: 535 VLRNQAPQCKLKTVNTETNDLITRSYLHLDQINETSTPSEIENLQQRNPDGINHSSVNSL 594
Query: 473 SS-EGNTNEKPREELVTQEKATPLLNVPSIVSSSNDLKKNSEDLSVAASHLQFSGSILDA 531
S E +T+ +P + QE T L + S+ SSN+L ++D +LD+
Sbjct: 595 SFIEDSTDREPNMK-PHQENKTHLADTASVTPSSNNLIDTTDD-------------VLDS 640
Query: 532 PVPSSSLDICSTLQFSIQDLRKRRQQRLSIMQSSCHTSGSVKMRRCFAAATLELSQPENE 591
P SS I S +QFS QDL+ RR++RLS++QSS + G + + AATLELSQP+ E
Sbjct: 641 P-KSSGQKIFSNMQFSFQDLKSRREKRLSLVQSSKYRYGKANGKSHYTAATLELSQPDIE 699
Query: 592 ERKARALAAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFE 651
++K R LAAA TELERLF+KE F RMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFE
Sbjct: 700 QQKERVLAAAATELERLFKKEYFSRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFE 759
Query: 652 RLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAV 711
LSQST+LNQQPLLRP++L+L+PEEE+VAS+HMDIIRKNGF+LEED +A G R++LK+V
Sbjct: 760 CLSQSTILNQQPLLRPIRLELSPEEEIVASIHMDIIRKNGFTLEEDLNAPPGCRYKLKSV 819
Query: 712 PFSKKITFGVEDVKDLISTLA--DNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSS 769
P+SK FGVEDVKDLISTL+ D GECSII SY+ D++DS+CP RVRAMLASRACRSS
Sbjct: 820 PYSKNTMFGVEDVKDLISTLSDGDGHGECSIIGSYRQDSSDSICPPRVRAMLASRACRSS 879
Query: 770 IMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRK 815
IMIGDALGRNEMQKILEHLA+L SPWNCPHGRPTMRHLVDLT I K
Sbjct: 880 IMIGDALGRNEMQKILEHLAELKSPWNCPHGRPTMRHLVDLTKIHK 925
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/71 (83%), Positives = 67/71 (94%)
Query: 9 SPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDN 68
S I+PI KG+VHRIC+GQVI DLSSAVKELVENSLDAGATSIEI+LK++GEEWFQV+DN
Sbjct: 5 SQIIKPIAKGIVHRICSGQVILDLSSAVKELVENSLDAGATSIEISLKDFGEEWFQVIDN 64
Query: 69 GCGISPNNFKV 79
GCGISPN+FKV
Sbjct: 65 GCGISPNSFKV 75
>gi|449436509|ref|XP_004136035.1| PREDICTED: mismatch repair endonuclease PMS2-like [Cucumis sativus]
gi|449498483|ref|XP_004160549.1| PREDICTED: mismatch repair endonuclease PMS2-like [Cucumis sativus]
Length = 921
Score = 768 bits (1983), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/760 (56%), Positives = 529/760 (69%), Gaps = 33/760 (4%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
+ + L AYA+IA+GVRF+CTN+ GKN KSVV KTQGS S+KDNIITVFGMN +NCLE V
Sbjct: 180 KLISLLNAYAVIARGVRFLCTNSAGKNAKSVVFKTQGSGSIKDNIITVFGMNTFNCLESV 239
Query: 140 AICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQYP 199
I SD CKV+GF+SK GQGSGRNLGDRQ+FFVN+RPVD+PKVSKLVNELYK ANSRQYP
Sbjct: 240 CILLSDDCKVDGFVSKSGQGSGRNLGDRQFFFVNNRPVDMPKVSKLVNELYKSANSRQYP 299
Query: 200 IAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASYSVNKVEQLI 259
IAI+NF +P++ACDVNVTPDKRK+FFSDE IL LRE L +IYSP NA YSVNKVE+
Sbjct: 300 IAILNFTLPSKACDVNVTPDKRKIFFSDETHILQTLREELLKIYSPTNACYSVNKVEEPT 359
Query: 260 EPEKSGP--SSGAESCMFLEQLSPDGNGCIEILNEQQISKGNTPKTVEVDTLHS------ 311
S S + M LE S DG + + Q PKT + D+ +
Sbjct: 360 VQVDSLELCSDNGKLSMLLEHFSSDGGDLRDASSHQ-------PKTDDDDSFNKIKNVEQ 412
Query: 312 --DALEGLVHSSNENG-KGNFTLKAHDDKSADR-LSKFNCMKLIGPHNVPTEENCPSPSR 367
+ E L EN + +F L+ H K AD L+ + K N P
Sbjct: 413 SPHSTEMLNSDDEENATRKDFALRTHGTKKADVPLNDHDQHKRTYLSNKKGVHVTP---- 468
Query: 368 VMAKNITEDGESDSRSRCIQSSLNKFVTVSKRKYESIARPLTEMPLLRNQSLHCQMKKSN 427
+ ++ G SR +QSSL+KFVT++KRK E+++ PL+E+P+LRNQ L+ Q KK+
Sbjct: 469 -FSPLLSVTGTDTSR---VQSSLDKFVTINKRKSETLSAPLSEVPVLRNQFLNNQWKKTC 524
Query: 428 SDMDAVDTR-SPVRRHLVDDIAKLNKIEPFKCNKADKVSKEIENILSSEGNTNEKPREEL 486
D+ + D + + DD N + K D+V ++ SS ++++ E
Sbjct: 525 PDIASKDIECTNGNFQVFDDFVVGNDEDGSIQFKTDRVVSKVYLPPSSADHSDDGEATEE 584
Query: 487 VTQEKATPLLN--VPSIVSSSNDLKKNSEDLSVAASHLQFSGSILDAPVPSSSLDICSTL 544
T E + + + S S + DL SEDL + +Q SG + ++ P L +CST
Sbjct: 585 CTGEAVAKVHSSVIESTASPTKDLAMMSEDLPLPGCSIQPSGFLKESSSPQ--LKLCSTF 642
Query: 545 QFSIQDLRKRRQQRLSIMQSSCHTSGSVKMRRCFAAATLELSQPENEERKARALAAATTE 604
F +L+KRR QR + + +T K++ +AAATL+LSQ +NE+RKARAL AA E
Sbjct: 643 HFDFHELKKRRFQRQLRFKLNGYTCERKKLKCHYAAATLKLSQTDNEDRKARALEAAARE 702
Query: 605 LERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPL 664
L+RLFRK+DF RMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQST+LNQQPL
Sbjct: 703 LDRLFRKKDFSRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTILNQQPL 762
Query: 665 LRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDV 724
LRPL L+L+ EEEVV S+HMD+ RKNGF++EEDP +L G RFRLKAVPFSK ITFGVEDV
Sbjct: 763 LRPLGLELSAEEEVVVSIHMDVFRKNGFTIEEDPRSLPGNRFRLKAVPFSKNITFGVEDV 822
Query: 725 KDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKI 784
KDLISTLAD++GECSII SY+MDTADSVCPSRVRAMLASRACRSS+MIGD LGRNEMQKI
Sbjct: 823 KDLISTLADSEGECSIIGSYRMDTADSVCPSRVRAMLASRACRSSVMIGDPLGRNEMQKI 882
Query: 785 LEHLADLNSPWNCPHGRPTMRHLVDLTTIRKNIDENGAGC 824
LEHLA+L SPWNCPHGRPTMRHLVDLTT++++ +E+ A C
Sbjct: 883 LEHLAELKSPWNCPHGRPTMRHLVDLTTVKRS-EESEADC 921
Score = 140 bits (352), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 64/82 (78%), Positives = 73/82 (89%)
Query: 1 MDVETPTNSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGE 60
M+V +SP I+PINKG+VHRICAGQVI DLSSAVKELVENSLDAGATSIEI+LK+YGE
Sbjct: 1 MEVGLAVDSPAIKPINKGIVHRICAGQVILDLSSAVKELVENSLDAGATSIEISLKDYGE 60
Query: 61 EWFQVVDNGCGISPNNFKVRAV 82
EWFQV+DNG GISP NF+V A+
Sbjct: 61 EWFQVIDNGSGISPTNFRVLAL 82
>gi|18411951|ref|NP_567236.1| DNA mismatch repair protein PMS2 [Arabidopsis thaliana]
gi|15617225|gb|AAL01156.1| DNA mismatch repair protein [Arabidopsis thaliana]
gi|332656775|gb|AEE82175.1| DNA mismatch repair protein PMS2 [Arabidopsis thaliana]
Length = 923
Score = 743 bits (1917), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 407/745 (54%), Positives = 519/745 (69%), Gaps = 49/745 (6%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
+ V L AYALIAKGVRFVC+NTTGKN KSVVL TQG SLKDNIITVFG++ + L+PV
Sbjct: 185 KLVSLLNAYALIAKGVRFVCSNTTGKNPKSVVLNTQGRGSLKDNIITVFGISTFTSLQPV 244
Query: 140 AICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQYP 199
+IC S+ C+VEGFLSKPGQG+GRNL DRQYFF+N RPVD+PKVSKLVNELYK +SR+YP
Sbjct: 245 SICVSEDCRVEGFLSKPGQGTGRNLADRQYFFINGRPVDMPKVSKLVNELYKDTSSRKYP 304
Query: 200 IAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASYSVNKVEQLI 259
+ I++FIVP ACD+NVTPDKRKVFFSDE S++ +LREGL EIYS +NASY VN+ E+
Sbjct: 305 VTILDFIVPGGACDLNVTPDKRKVFFSDETSVIGSLREGLNEIYSSSNASYIVNRFEENS 364
Query: 260 E-PEKSGPSS-GAESCMFLEQLSPDGNGCIEILNEQQISKGNTPKTVEVDTLHSDALEGL 317
E P+K+G SS +S + E + D + + + I K N P EV+ +S +E
Sbjct: 365 EQPDKAGVSSFQKKSNLLSEGIVLDVSSKTRL--GEAIEKEN-PSLREVEIDNSSPMEKF 421
Query: 318 VHSSNENG--KGNFTLKAHDDKSADRLSKFNCMKLIGPHNVPTEENCPSPSRVMAK-NIT 374
G KG +L HD D+ +PS+ + + N+T
Sbjct: 422 KFEIKACGTKKGEGSLSVHDVTHLDK----------------------TPSKGLPQLNVT 459
Query: 375 E---DGESD--SRSRCIQSSLNKFVTVSKRKYESIARPLTEMPLLRNQSLHCQMKKSNSD 429
E D D SRS QS+LN FVT+ KRK+E+I+ L+E P+LRNQ+ +++KS +
Sbjct: 460 EKVTDASKDLSSRSSFAQSTLNTFVTMGKRKHENISTILSETPVLRNQTSSYRVEKSKFE 519
Query: 430 MDAVDTRSPVRRHLVDDIAKLNKIEPFKCNKADKVSKEIENILSSEGNTNEKPREELVTQ 489
+ A+ +R V +DD+ I +++ S E+ N +S + R E +
Sbjct: 520 VRALASRCLVEGDQLDDMV----ISKEDMTPSERDS-ELGNRISPGTQADNVERHE---R 571
Query: 490 EKATPL-LNVPSI--VSSSNDLKKNSEDLSVAASHLQFSGSILDAPVPSSSLDICSTLQF 546
E P+ P+ + D+++ SED + L+ ++LD+P S+ + STL+F
Sbjct: 572 EHEKPIRFEEPTSDNTLTKGDVERVSEDNPRCSQPLRSVATVLDSPAQSTGPKMFSTLEF 631
Query: 547 SIQDLRKRRQQRLSIMQSSCHTSGSVKM---RRCFAAATLELSQPENEERKARALAAATT 603
S Q+LR RR +RLS +QS+ + S + ++CFAAATLELSQP++EERKARALAAAT+
Sbjct: 632 SFQNLRTRRLERLSRLQSTGYVSKCMNTPQPKKCFAAATLELSQPDDEERKARALAAATS 691
Query: 604 ELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQP 663
ELERLFRKEDF RM+V+GQFNLGFII KL++DLFIVDQHAADEK+NFE L++STVLNQQP
Sbjct: 692 ELERLFRKEDFRRMQVLGQFNLGFIIAKLERDLFIVDQHAADEKFNFEHLARSTVLNQQP 751
Query: 664 LLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVED 723
LL+PL L+L+PEEEV MHMDIIR+NGF LEE+P A G FRL+A+P+SK ITFGVED
Sbjct: 752 LLQPLNLELSPEEEVTVLMHMDIIRENGFLLEENPSAPPGKHFRLRAIPYSKNITFGVED 811
Query: 724 VKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQK 783
+KDLISTL DN GECS+ SSYK DS+CPSRVRAMLASRACRSS+MIGD L +NEMQK
Sbjct: 812 LKDLISTLGDNHGECSVASSYKTSKTDSICPSRVRAMLASRACRSSVMIGDPLRKNEMQK 871
Query: 784 ILEHLADLNSPWNCPHGRPTMRHLV 808
I+EHLADL SPWNCPHGRPTMRHLV
Sbjct: 872 IVEHLADLESPWNCPHGRPTMRHLV 896
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 57/71 (80%), Positives = 66/71 (92%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IRPIN+ V+HRIC+GQVI DLSSAVKELVENSLDAGATSIEI L++YGE++FQV+DNGCG
Sbjct: 17 IRPINRNVIHRICSGQVILDLSSAVKELVENSLDAGATSIEINLRDYGEDYFQVIDNGCG 76
Query: 72 ISPNNFKVRAV 82
ISP NFKV A+
Sbjct: 77 ISPTNFKVLAL 87
>gi|297809903|ref|XP_002872835.1| hypothetical protein ARALYDRAFT_490319 [Arabidopsis lyrata subsp.
lyrata]
gi|297318672|gb|EFH49094.1| hypothetical protein ARALYDRAFT_490319 [Arabidopsis lyrata subsp.
lyrata]
Length = 923
Score = 731 bits (1888), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 406/740 (54%), Positives = 515/740 (69%), Gaps = 35/740 (4%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
+ V L AYALIAKGVRFVC+NT+GKN KS+VL TQG SLKDNIITVFGMN + L+PV
Sbjct: 185 KLVSLLNAYALIAKGVRFVCSNTSGKNPKSIVLNTQGRGSLKDNIITVFGMNTFTSLQPV 244
Query: 140 AICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQYP 199
+IC S+ C+VEGFLSKPGQG+GRNL DRQYFF+N RPV++PKVSKLVNELYK +SR+YP
Sbjct: 245 SICISEDCRVEGFLSKPGQGTGRNLADRQYFFINGRPVEMPKVSKLVNELYKDTSSRKYP 304
Query: 200 IAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASYSVNKVEQLI 259
+AI++F+VP ACD+NVTPDKRKVFFSDE S++ +LREGL EIYS +NASY VN+ E+
Sbjct: 305 VAILDFVVPGGACDLNVTPDKRKVFFSDENSVIGSLREGLNEIYSSSNASYIVNRFEENS 364
Query: 260 E-PEKSGPSSGAESCMFLEQLSPDGNGCIEILNEQQISKGNTPKTVEVDTLHSDALEGLV 318
E P+K+G SS E + + G E + + + E+D +S +E
Sbjct: 365 EQPDKAGVSSFQEKSNLMSKEIVLDVGSKTRQGEAIAGENQSSREAEID--NSSPMEKFK 422
Query: 319 HSSNENG--KGNFTLKAHDDKSADRLSKFNCMKLIGPHNVPTEENCPSPSRVMAKNITED 376
G KG +L HD M L H T VM K
Sbjct: 423 FDIKARGTKKGEGSLSPHD------------MSLTVTHLDKTTSKGLPHLNVMEKVTNAS 470
Query: 377 GESDSRSRCIQSSLNKFVTVSKRKYESIARPLTEMPLLRNQSLHCQMKKSNSDMDAVDTR 436
+ SRS QS+LN FVT+ KRK+E+I+ L+E+P+LRNQ+ +++KS ++ A+ +R
Sbjct: 471 KDLGSRSTFAQSTLNTFVTMGKRKHENISTILSEVPVLRNQTSSYRVEKSKFEVRALASR 530
Query: 437 SPVRRHLVD--DIAKLNKIEPFKCNKADKVSKEIENILSSEGNTNEKPREELVTQEKATP 494
+ VD DI+K E N+ D E+ N ++ T+ R E +E P
Sbjct: 531 CLMEGDQVDGMDISK----EDMTPNEMDS---ELGNQIAPGTQTDNTERHE---REHEKP 580
Query: 495 L-LNVPSI--VSSSNDLKKNSEDLSVAASHLQFSGSILDAPVPSSSLDICSTLQFSIQDL 551
+ P+ + D+++ SED + L+ ++LD+P S+ + STL+FS Q+L
Sbjct: 581 ICFEEPTSDNTLTKGDVERISEDNPGCSQPLRSVATVLDSPAQSTGPKMFSTLEFSFQNL 640
Query: 552 RKRRQQRLSIMQSSCHTS---GSVKMRRCFAAATLELSQPENEERKARALAAATTELERL 608
R+RR +RLS +QS+ + S + + ++CFAAATLELSQP++EERKARALAAAT+ELERL
Sbjct: 641 RERRLERLSRLQSTGYVSKCMNTPRPKKCFAAATLELSQPDDEERKARALAAATSELERL 700
Query: 609 FRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPL 668
FRKEDF RM+V+GQFNLGFII KL++DLFIVDQHAADEK+NFE L++STVLNQQPLL+PL
Sbjct: 701 FRKEDFRRMQVLGQFNLGFIIAKLERDLFIVDQHAADEKFNFEHLARSTVLNQQPLLQPL 760
Query: 669 KLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLI 728
L+L+PEEEV MHMDIIR+NGF LEE+P A AG FRL+AVP+SK ITFGVED+KDLI
Sbjct: 761 NLELSPEEEVTVLMHMDIIRENGFLLEENPSAPAGKHFRLRAVPYSKNITFGVEDLKDLI 820
Query: 729 STLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHL 788
STL DN GECS +SSYK DS+CPSRVRAMLASRACRSS+MIGD L +NEMQKI+EHL
Sbjct: 821 STLGDNHGECSGVSSYKTSKTDSICPSRVRAMLASRACRSSVMIGDPLRKNEMQKIVEHL 880
Query: 789 ADLNSPWNCPHGRPTMRHLV 808
ADL SPWNCPHGRPTMRHLV
Sbjct: 881 ADLESPWNCPHGRPTMRHLV 900
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 57/71 (80%), Positives = 66/71 (92%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IRPIN+ V+HRIC+GQVI DLSSAVKELVENSLDAGATSIEI L++YGE++FQV+DNGCG
Sbjct: 17 IRPINRNVIHRICSGQVILDLSSAVKELVENSLDAGATSIEINLRDYGEDYFQVIDNGCG 76
Query: 72 ISPNNFKVRAV 82
ISP NFKV A+
Sbjct: 77 ISPTNFKVLAL 87
>gi|297743867|emb|CBI36837.3| unnamed protein product [Vitis vinifera]
Length = 854
Score = 512 bits (1319), Expect = e-142, Method: Compositional matrix adjust.
Identities = 271/394 (68%), Positives = 309/394 (78%), Gaps = 4/394 (1%)
Query: 423 MKKSNSDMDAVDTRSPVRRHLVDDIAKLNKIEPFKCNKADKVSKEIENILSSEGNTN-EK 481
+KK+NS+M A+ +RS V +D A + + EP K D EN S GN N EK
Sbjct: 443 LKKNNSEMHALVSRSFVNHQKTNDSAGIIESEPSKFLGVDSAFDATENPHYSGGNINDEK 502
Query: 482 PREELVTQEKATPLLNVPSIVSSSNDLKKNSEDLSVAASHLQFSGSILDAPVPSSSLDIC 541
E+L E P +V + S S + KN DLS AS +Q +LD P+PSS L IC
Sbjct: 503 AGEDLENHETPLPPADVATTASLSEE--KNISDLSGVASAVQ-DTPVLDTPMPSSDLKIC 559
Query: 542 STLQFSIQDLRKRRQQRLSIMQSSCHTSGSVKMRRCFAAATLELSQPENEERKARALAAA 601
STLQFS ++LR RR QRLS +QSS + G RC++AATLE SQPENEERK RALAAA
Sbjct: 560 STLQFSFEELRTRRHQRLSRLQSSSYKCGRTTTERCYSAATLEFSQPENEERKVRALAAA 619
Query: 602 TTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQ 661
TTELE+LF+K+DFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFE L+QSTVLNQ
Sbjct: 620 TTELEKLFKKQDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFEHLAQSTVLNQ 679
Query: 662 QPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGV 721
QPLLRPL+LDL+PEEEV+AS+HMDIIRKNGF+LEED HA G RF+LKAVPFSK ITFGV
Sbjct: 680 QPLLRPLRLDLSPEEEVIASIHMDIIRKNGFALEEDLHAPPGQRFKLKAVPFSKNITFGV 739
Query: 722 EDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEM 781
EDVK+LISTLAD QGECSI+ +YKMDT DS+CPSRVRAMLASRACRSS+MIGD LGR EM
Sbjct: 740 EDVKELISTLADGQGECSILGTYKMDTCDSICPSRVRAMLASRACRSSVMIGDPLGRKEM 799
Query: 782 QKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRK 815
Q+ILEHL+DL SPWNCPHGRPTMRHLVDLTTI K
Sbjct: 800 QRILEHLSDLKSPWNCPHGRPTMRHLVDLTTIYK 833
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 160/261 (61%), Positives = 200/261 (76%), Gaps = 5/261 (1%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
+ + L AYALIA GVR VCTNTTGKNVKS+VLKTQGS SLKDNIITVFGMN +NCLEP+
Sbjct: 180 KLISLLSAYALIAGGVRLVCTNTTGKNVKSMVLKTQGSGSLKDNIITVFGMNTFNCLEPL 239
Query: 140 AICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQYP 199
IC SDS KV+GF+SK G GSGR LGDRQ+FFVN RPVD+PKV KLVNELYKGANSRQYP
Sbjct: 240 NICLSDSSKVDGFVSKSGYGSGRTLGDRQFFFVNGRPVDMPKVGKLVNELYKGANSRQYP 299
Query: 200 IAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASYSVNKVEQLI 259
IAIMNF VPTRA DVNVTPDKRK+FFSDE SILH+LREGL++IYSP+ SYSVN+ E+
Sbjct: 300 IAIMNFTVPTRAYDVNVTPDKRKIFFSDEGSILHSLREGLEKIYSPSLTSYSVNRFEEPT 359
Query: 260 EPEKSGPSSGAESCMF--LEQLSPDGNGCI-EILNEQQISKGNTP-KTVEVDTLHSDALE 315
E + + ++ + +QL PDG+ E +E+QI++ P K V+ T + A++
Sbjct: 360 EETDNSELNPPQTQILSSSKQLFPDGSDLQEEAHSEEQITEDQIPSKMVKSSTENMHAVK 419
Query: 316 GLVHSSNENG-KGNFTLKAHD 335
+ HS +++ + +F+L+ H+
Sbjct: 420 EMDHSYDKDSIEKDFSLRVHE 440
Score = 144 bits (362), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/82 (81%), Positives = 73/82 (89%)
Query: 1 MDVETPTNSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGE 60
M+ + SPTIR INKG VHRIC+GQVI DLSSAVKELVENSLDAGATSIEIALKEYG+
Sbjct: 1 MEGAAQSESPTIRAINKGAVHRICSGQVILDLSSAVKELVENSLDAGATSIEIALKEYGQ 60
Query: 61 EWFQVVDNGCGISPNNFKVRAV 82
EWFQV+DNGCGISPNNFKV A+
Sbjct: 61 EWFQVIDNGCGISPNNFKVLAL 82
>gi|26450625|dbj|BAC42424.1| putative DNA mismatch repair protein PMS1 [Arabidopsis thaliana]
Length = 733
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 278/581 (47%), Positives = 375/581 (64%), Gaps = 50/581 (8%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
+ V L AYALIAKGVRFVC+NTTGKN KSVVL TQG SLKDNIITVFG++ + L+PV
Sbjct: 185 KLVSLLNAYALIAKGVRFVCSNTTGKNPKSVVLNTQGRGSLKDNIITVFGISTFTSLQPV 244
Query: 140 AICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQYP 199
+IC S+ C+VEGFLSKPGQG+GRNL DRQYFF+N RPVD+PKV KLVNELYK +SR+YP
Sbjct: 245 SICVSEDCRVEGFLSKPGQGTGRNLADRQYFFINGRPVDMPKV-KLVNELYKDTSSRKYP 303
Query: 200 IAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASYSVNKVEQLI 259
+ I++FIVP ACD+NVTPDKRKVFFSDE S++ +LREGL EIYS +NASY VN+ E+
Sbjct: 304 VTILDFIVPGGACDLNVTPDKRKVFFSDETSVIGSLREGLNEIYSSSNASYIVNRFEENS 363
Query: 260 E-PEKSGPSS-GAESCMFLEQLSPDGNGCIEILNEQQISKGNTPKTVEVDTLHSDALEGL 317
E P+K+G SS +S + E + D + + + I K N P EV+ +S +E
Sbjct: 364 EQPDKAGVSSFQKKSNLLSEGIVLDVSSKTRL--GEAIEKEN-PSLREVEIDNSSPMEKF 420
Query: 318 VHSSNENG--KGNFTLKAHDDKSADRLSKFNCMKLIGPHNVPTEENCPSPSRVMAK-NIT 374
G KG +L HD D+ +PS+ + + N+T
Sbjct: 421 KFEIKACGTKKGEGSLSVHDVTHLDK----------------------TPSKGLPQLNVT 458
Query: 375 E---DGESD--SRSRCIQSSLNKFVTVSKRKYESIARPLTEMPLLRNQSLHCQMKKSNSD 429
E D D SRS QS+LN FVT+ KRK+E+I+ L+E P+LRNQ+ +++KS +
Sbjct: 459 EKVTDASKDLSSRSSFAQSTLNTFVTMGKRKHENISTILSETPVLRNQTSSYRVEKSKFE 518
Query: 430 MDAVDTRSPVRRHLVDDIAKLNKIEPFKCNKADKVSKEIENILSSEGNTNEKPREELVTQ 489
+ A+ +R V +DD+ I +++ S E+ N +S + R E +
Sbjct: 519 VRALASRCLVEGDQLDDMV----ISKEDMTPSERDS-ELGNRISPGTQADNVERHE---R 570
Query: 490 EKATPL-LNVPSI--VSSSNDLKKNSEDLSVAASHLQFSGSILDAPVPSSSLDICSTLQF 546
E P+ P+ + D+++ SED + L+ ++LD+P S+ + STL+F
Sbjct: 571 EHEKPIRFEEPTSDNTLTKGDVERVSEDNPRCSQPLRSVATVLDSPAQSTGPKMFSTLEF 630
Query: 547 SIQDLRKRRQQRLSIMQSSCHTSGSVKM---RRCFAAATLELSQPENEERKARALAAATT 603
S Q+LR RR +RLS +QS+ + S + ++CFAAATLELSQP++EERKARALAAAT+
Sbjct: 631 SFQNLRTRRLERLSRLQSTGYVSKCMNTPQPKKCFAAATLELSQPDDEERKARALAAATS 690
Query: 604 ELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAA 644
ELERLFRKEDF RM+V+GQFNLGFII KL++DLFIVDQ ++
Sbjct: 691 ELERLFRKEDFRRMQVLGQFNLGFIIAKLERDLFIVDQSSS 731
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/71 (80%), Positives = 66/71 (92%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IRPIN+ V+HRIC+GQVI DLSSAVKELVENSLDAGATSIEI L++YGE++FQV+DNGCG
Sbjct: 17 IRPINRNVIHRICSGQVILDLSSAVKELVENSLDAGATSIEINLRDYGEDYFQVIDNGCG 76
Query: 72 ISPNNFKVRAV 82
ISP NFKV A+
Sbjct: 77 ISPTNFKVLAL 87
>gi|326508973|dbj|BAJ86879.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 780
Score = 392 bits (1008), Expect = e-106, Method: Compositional matrix adjust.
Identities = 252/621 (40%), Positives = 354/621 (57%), Gaps = 68/621 (10%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
+ + L AYALIAKGVR +CTNT GKN K VV+KTQGSSSLKDNI+TVFG+N CLEP
Sbjct: 176 KVISLLHAYALIAKGVRLLCTNTVGKNSKMVVVKTQGSSSLKDNIVTVFGLNTLKCLEPF 235
Query: 140 AICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQYP 199
+ S+ C+VEGFLSKPG G+GRN GDRQ+F+VN RPVD+PKV+KLVNELY+ +NSRQYP
Sbjct: 236 NLALSEGCQVEGFLSKPGPGTGRNSGDRQFFYVNGRPVDMPKVTKLVNELYRSSNSRQYP 295
Query: 200 IAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASYSVNKVEQLI 259
+A++NF +PT + DVNV PDKRK+FFS E +IL +LRE ++ +Y+P S+S+N +E
Sbjct: 296 LAVLNFCIPTTSYDVNVAPDKRKIFFSSEDTILLSLREAIESLYNPQQCSFSINHIE--- 352
Query: 260 EPEKSGPSSGA------------ESCMFLEQ---LSPDGNGCIEILNEQQISKGNTPKTV 304
+PEK + +S +++ SP+ + C E + + PK
Sbjct: 353 DPEKVNHTEDPVKEDDPTIDEPIKSTYLMDKENVSSPENDNCKE---DTDSDDQDPPKDQ 409
Query: 305 EVDTLHSDALEGLVHSSNENGKGNFTLKAHDDKSADRLSKFNCMKLIGPHNVPTEENCPS 364
+V + + G + D DR F+ ++ P P + +
Sbjct: 410 KVFSSATRVATGAA------CRDMSPWTRSPDTEVDRPPWFSALRYEQPKR-PRADCKSN 462
Query: 365 PSRVMAKNITEDG--ESDSRSRCIQSSLNKFVTVSKRKYESIARPLTEMPLLRNQSLHCQ 422
P R +N G S S +QSSL F++++KRK+E +TE +LR + Q
Sbjct: 463 PVR---ENHVRTGLAAQSSPSTIVQSSLMNFLSLNKRKHEDSCNLITEAQVLRRGTCSGQ 519
Query: 423 MKKSNSDMDAVDTRSPVRRHLVDDIAKLNKIEPFKCNKADKVSKEIENILSSEGNTNEKP 482
+++++ + +A + D L +I + + V K E L N +P
Sbjct: 520 VRRTSLEANAPG---------ISDAISLQEISLWDHSPQPFVPKRTEVPLQ-----NSEP 565
Query: 483 REELVTQEKATPLLNVPSIVSSSNDLKK---------NSEDLSVAASHLQFSGS---ILD 530
LV++ LL + S+ D+ + ++ D + + Q + S +LD
Sbjct: 566 -PNLVSRSTEPHLLKPCDLNSTEFDVDERNDRCLPNFDASDQCLKDTEAQNTPSNIPLLD 624
Query: 531 APVPSSSLDICST-----LQFSIQDLRKRRQQRLSIMQSSCHTSGSVKMRRCFAAATLEL 585
+S +CST +QF+I +LR+RR+ I+ S K RC+ AATL+
Sbjct: 625 GHDNDTS--VCSTSVSYSVQFTIDELRRRRKHSF-IVSHVNRAHCSEKTARCYKAATLDN 681
Query: 586 SQPENEERKARALAAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAAD 645
P +EE K+ LAAAT EL+R F K++FG MKV+GQFNLGFIIGKL+QDLFIVDQHAAD
Sbjct: 682 YVPNDEEGKSNYLAAATNELDRFFSKDNFGEMKVVGQFNLGFIIGKLEQDLFIVDQHAAD 741
Query: 646 EKYNFERLSQSTVLNQQPLLR 666
EKYNFE LSQST LN QPLL+
Sbjct: 742 EKYNFESLSQSTTLNIQPLLQ 762
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/74 (72%), Positives = 63/74 (85%)
Query: 9 SPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDN 68
SP I+PI K VHRIC+GQVI DLSSAVKELVENSLDAGAT++E+ LK YGEEWF+V DN
Sbjct: 5 SPAIKPIGKSAVHRICSGQVIFDLSSAVKELVENSLDAGATTVEVGLKAYGEEWFKVADN 64
Query: 69 GCGISPNNFKVRAV 82
G GISP+NF+ A+
Sbjct: 65 GSGISPSNFQALAL 78
>gi|357149874|ref|XP_003575262.1| PREDICTED: mismatch repair endonuclease PMS2-like [Brachypodium
distachyon]
Length = 921
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 223/467 (47%), Positives = 295/467 (63%), Gaps = 60/467 (12%)
Query: 381 SRSRCIQSSLNKFVTVSKRKYESIARPLTEMPLLRNQSLHCQMKKSNSD----------- 429
S S +QSSL+ F++++KRK+E L+E P+LR + Q+++++S+
Sbjct: 468 SPSTTVQSSLSNFLSLNKRKHEDSCNLLSEAPVLRRGTCSGQVRRTSSETSTPTILISGT 527
Query: 430 -----MDAVDTRSPVRRHLVDD-IAKLNKIEPFKCNKADKVSKEIENILSSEGNTNEKPR 483
+++ SP+R H + K ++ P + +E P
Sbjct: 528 SGIPNVNSDQETSPLRHHSPQSFLPKRTEVSP---------------------HHSEPPN 566
Query: 484 EELVTQEKATPLLNVPSIVSSSN--DLKKNSEDLSVAASHLQFSGSILDAPVPSS----- 536
E + E TP L+ SI S+ + D + + + + AA ++ P+P +
Sbjct: 567 IESHSTE--TPPLDPCSIPSTKSYVDQQNDQHNSNFAAPDKYSEVEPINIPLPDACGHDN 624
Query: 537 SLDICST------LQFSIQDLRKRRQQRLSIMQSSCHTSG---SVKMRRCFAAATLELSQ 587
+CST +QF++ +LR+RR+ ++ H G S K R + AATL+
Sbjct: 625 GTTVCSTSVSYPVMQFTVAELRRRRKYSFTV----SHKKGVYCSNKTARFYKAATLDNYV 680
Query: 588 PENEERKARALAAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEK 647
P ++E K+ LAAAT EL+RLF K++FG M+V+GQFNLGFIIGKLDQDLFIVDQHAADEK
Sbjct: 681 PNDDEGKSNYLAAATNELDRLFSKDNFGEMEVVGQFNLGFIIGKLDQDLFIVDQHAADEK 740
Query: 648 YNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFR 707
YNFE LSQST LN QPLL PL+L+L+PEEEV+ SM+M IRKNGF L ED HA G +
Sbjct: 741 YNFESLSQSTTLNIQPLLHPLRLELSPEEEVIVSMNMTTIRKNGFVLAEDLHASPGNHYL 800
Query: 708 LKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACR 767
LKAVPFSK ITFGV+D+K+LIS L D+QG+CSIISSYKMD DSVCPSRVRAMLASRACR
Sbjct: 801 LKAVPFSKNITFGVQDMKELISMLTDSQGDCSIISSYKMDKTDSVCPSRVRAMLASRACR 860
Query: 768 SSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIR 814
S MIGD L + EM+KIL++L L SPWNCPHGRPTMRHL DL TI+
Sbjct: 861 MSTMIGDPLTKAEMKKILKNLTGLRSPWNCPHGRPTMRHLADLHTIK 907
Score = 259 bits (661), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 118/184 (64%), Positives = 148/184 (80%), Gaps = 3/184 (1%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
+ + L AYALIAKGVR +CTNT GKN K VVLKTQGSSSLKDNIITVFG+N + CLEP
Sbjct: 176 KVISLLNAYALIAKGVRLLCTNTVGKNSKMVVLKTQGSSSLKDNIITVFGLNTFKCLEPF 235
Query: 140 AICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQYP 199
+ + C+VEGFLSKPG GSGRN GDRQ+F+VN RPVD+PKV+KLVNELYK +NS+QYP
Sbjct: 236 NVTILEGCQVEGFLSKPGPGSGRNSGDRQFFYVNGRPVDMPKVTKLVNELYKSSNSKQYP 295
Query: 200 IAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASYSVNKVEQLI 259
+A++NF +PT + DVNV PDKRK+FFS E +IL +LRE ++ +Y+P S+S+N +E
Sbjct: 296 VAVLNFCIPTTSYDVNVAPDKRKIFFSSEQTILLSLREAIENLYNPQQCSFSINLIE--- 352
Query: 260 EPEK 263
+PEK
Sbjct: 353 DPEK 356
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/74 (72%), Positives = 63/74 (85%)
Query: 9 SPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDN 68
SP I+PI K VHRIC+GQVI DLSSAVKELVENSLDAGAT++E+ LK YGEEWF+V DN
Sbjct: 5 SPAIKPIGKSAVHRICSGQVIFDLSSAVKELVENSLDAGATTVEVNLKAYGEEWFKVADN 64
Query: 69 GCGISPNNFKVRAV 82
G GISP+NF+ A+
Sbjct: 65 GSGISPSNFQALAL 78
>gi|115447025|ref|NP_001047292.1| Os02g0592300 [Oryza sativa Japonica Group]
gi|50726475|dbj|BAD34084.1| putative PMS2 postmeiotic segregation increased 2 [Oryza sativa
Japonica Group]
gi|113536823|dbj|BAF09206.1| Os02g0592300 [Oryza sativa Japonica Group]
gi|218191082|gb|EEC73509.1| hypothetical protein OsI_07875 [Oryza sativa Indica Group]
gi|222623151|gb|EEE57283.1| hypothetical protein OsJ_07338 [Oryza sativa Japonica Group]
Length = 923
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 215/453 (47%), Positives = 292/453 (64%), Gaps = 28/453 (6%)
Query: 381 SRSRCIQSSLNKFVTVSKRKYESIARPLTEMPLLRNQSLHCQMKKSN------------- 427
S S +Q S+ KF++ +KRK+E ++E P+LR + Q+++++
Sbjct: 471 SPSSAVQPSIMKFLSQNKRKHEDSCNLISEAPVLRRGTCLEQVRRTDLGVNSPTALTSRV 530
Query: 428 ---SDMDAVDTRSPVRRH-LVDDIAKLNKIEPFKCNKADKVSK--EIENILSSEGNTNEK 481
+++A +P+R H L + ++ + P + VS E+ + + + E
Sbjct: 531 SNIPEVNAPQGTNPLRHHSLQSFVPEMPEDSPQHSEPPNIVSHRDEVPQLRPCDVHATE- 589
Query: 482 PREELVTQEKATPLLNVPSIVSSSNDLKKNSEDLSVAASHLQFSGSILDAPVPSSSLDIC 541
E+ Q P + S ++++ ++ +++ + G A SS +
Sbjct: 590 --SEVDNQHD--PCHSKFGAPSRCSEVEPQNKLTNISLPDAHYDGHDTAAHSGQSSYPV- 644
Query: 542 STLQFSIQDLRKRRQQRLSIMQSSCHTSGSVKMRRCFAAATLELSQPENEERKARALAAA 601
+QF++ DLR+RR+ I + S K RC+ AATL+ P+NEE K+ +LAAA
Sbjct: 645 --MQFTLADLRRRRRHSFMISHAK-KGSFPEKSTRCYKAATLDNYVPDNEEGKSNSLAAA 701
Query: 602 TTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQ 661
T+EL++LF K+DFG M+V+GQFNLGFIIGKLDQDLFIVDQHAADEKYNFE LSQST LN
Sbjct: 702 TSELDKLFSKDDFGEMEVVGQFNLGFIIGKLDQDLFIVDQHAADEKYNFENLSQSTTLNI 761
Query: 662 QPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGV 721
QPLL+PL+LDL+PEEEV+ SM+M IRKNGF L ED HA R+ +KAVPFSK ITFG
Sbjct: 762 QPLLQPLRLDLSPEEEVIVSMNMSTIRKNGFVLAEDLHASPCNRYFIKAVPFSKNITFGA 821
Query: 722 EDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEM 781
+DVK+LIS LAD+QG+CSIISSYK+D DS+CPSRVRAMLASRACR S MIGD L + EM
Sbjct: 822 QDVKELISMLADSQGDCSIISSYKLDRTDSICPSRVRAMLASRACRMSTMIGDPLTKTEM 881
Query: 782 QKILEHLADLNSPWNCPHGRPTMRHLVDLTTIR 814
+KIL++L L SPWNCPHGRPTMRHL DL I+
Sbjct: 882 KKILKNLTGLRSPWNCPHGRPTMRHLADLHAIK 914
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 52/75 (69%), Positives = 61/75 (81%)
Query: 8 NSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVD 67
+SP IRPI K VHRIC+GQVI DLSSAVKELVENSLDAGAT++E+ L+ YGE+ F V D
Sbjct: 5 SSPAIRPIGKSAVHRICSGQVIFDLSSAVKELVENSLDAGATTVEVTLRSYGEDSFTVAD 64
Query: 68 NGCGISPNNFKVRAV 82
NG GISP NF+ A+
Sbjct: 65 NGTGISPTNFQALAL 79
>gi|3193291|gb|AAC19275.1| T14P8.6 [Arabidopsis thaliana]
gi|7269006|emb|CAB80739.1| AT4g02460 [Arabidopsis thaliana]
Length = 779
Score = 326 bits (836), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 147/191 (76%), Positives = 168/191 (87%)
Query: 618 KVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEE 677
+V+GQFNLGFII KL++DLFIVDQHAADEK+NFE L++STVLNQQPLL+PL L+L+PEEE
Sbjct: 562 RVLGQFNLGFIIAKLERDLFIVDQHAADEKFNFEHLARSTVLNQQPLLQPLNLELSPEEE 621
Query: 678 VVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGE 737
V MHMDIIR+NGF LEE+P A G FRL+A+P+SK ITFGVED+KDLISTL DN GE
Sbjct: 622 VTVLMHMDIIRENGFLLEENPSAPPGKHFRLRAIPYSKNITFGVEDLKDLISTLGDNHGE 681
Query: 738 CSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNC 797
CS+ SSYK DS+CPSRVRAMLASRACRSS+MIGD L +NEMQKI+EHLADL SPWNC
Sbjct: 682 CSVASSYKTSKTDSICPSRVRAMLASRACRSSVMIGDPLRKNEMQKIVEHLADLESPWNC 741
Query: 798 PHGRPTMRHLV 808
PHGRPTMRHLV
Sbjct: 742 PHGRPTMRHLV 752
Score = 278 bits (710), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 173/379 (45%), Positives = 229/379 (60%), Gaps = 55/379 (14%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
+ V L AYALIAKGVRFVC+NTTGKN KSVVL TQG SLKDNIITVFG++ + L+P
Sbjct: 196 KLVSLLNAYALIAKGVRFVCSNTTGKNPKSVVLNTQGRGSLKDNIITVFGISTFTSLQP- 254
Query: 140 AICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQYP 199
G+GRNL DRQYFF+N RPVD+PKVSKLVNELYK +SR+YP
Sbjct: 255 -------------------GTGRNLADRQYFFINGRPVDMPKVSKLVNELYKDTSSRKYP 295
Query: 200 IAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASYSVNKVEQLI 259
+ I++FIVP ACD+NVTPDKRKVFFSDE S++ +LREGL EIYS +NASY VN+ E+
Sbjct: 296 VTILDFIVPGGACDLNVTPDKRKVFFSDETSVIGSLREGLNEIYSSSNASYIVNRFEENS 355
Query: 260 E-PEKSGPSS-GAESCMFLEQLSPDGNGCIEILNEQQISKGNTPKTVEVDTLHSDALEGL 317
E P+K+G SS +S + E + D + + + I K N P EV+ +S +E
Sbjct: 356 EQPDKAGVSSFQKKSNLLSEGIVLDVSSKTRL--GEAIEKEN-PSLREVEIDNSSPMEKF 412
Query: 318 VHSSNENG--KGNFTLKAHDDKSADRLSKFNCMKLIGPHNVPTEENCPSPSRVMAK-NIT 374
G KG +L HD D+ +PS+ + + N+T
Sbjct: 413 KFEIKACGTKKGEGSLSVHDVTHLDK----------------------TPSKGLPQLNVT 450
Query: 375 E---DGESD--SRSRCIQSSLNKFVTVSKRKYESIARPLTEMPLLRNQSLHCQMKKSNSD 429
E D D SRS QS+LN FVT+ KRK+E+I+ L+E P+LRNQ+ +++KS +
Sbjct: 451 EKVTDASKDLSSRSSFAQSTLNTFVTMGKRKHENISTILSETPVLRNQTSSYRVEKSKFE 510
Query: 430 MDAVDTRSPVRRHLVDDIA 448
+ A+ +R V +DD+
Sbjct: 511 VRALASRCLVEGDQLDDMV 529
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/81 (71%), Positives = 70/81 (86%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IRPIN+ V+HRIC+GQVI DLSSAVKELVENSLDAGATSIEI L++YGE++FQV+DNGCG
Sbjct: 17 IRPINRNVIHRICSGQVILDLSSAVKELVENSLDAGATSIEINLRDYGEDYFQVIDNGCG 76
Query: 72 ISPNNFKVRAVFLCQAYALIA 92
ISP NFKV L + + ++A
Sbjct: 77 ISPTNFKVCVQILRRTFDVLA 97
>gi|413922861|gb|AFW62793.1| hypothetical protein ZEAMMB73_370746 [Zea mays]
Length = 205
Score = 318 bits (815), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 150/196 (76%), Positives = 170/196 (86%)
Query: 619 VIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEV 678
V+GQFNLGFIIGKL QDLFIVDQHA+DEKYNFE LSQST+LN QPLL PL+LDL+PEEEV
Sbjct: 2 VVGQFNLGFIIGKLGQDLFIVDQHASDEKYNFECLSQSTILNVQPLLEPLRLDLSPEEEV 61
Query: 679 VASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGEC 738
+ SM+M IRKNGF L ED HA G + LKAVPFSK ITFGV+DVK+LIS LAD+QG+C
Sbjct: 62 IVSMNMSTIRKNGFVLAEDLHASPGNHYLLKAVPFSKNITFGVQDVKELISMLADSQGDC 121
Query: 739 SIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCP 798
SIISSYK+DTADSVCPSRVRAMLASRACR S MIGD L + EM+KIL+++A L SPWNCP
Sbjct: 122 SIISSYKLDTADSVCPSRVRAMLASRACRMSTMIGDPLTKAEMKKILKNMAGLRSPWNCP 181
Query: 799 HGRPTMRHLVDLTTIR 814
HGRPTMRHL DL T++
Sbjct: 182 HGRPTMRHLADLRTMK 197
>gi|395514664|ref|XP_003761534.1| PREDICTED: mismatch repair endonuclease PMS2 [Sarcophilus harrisii]
Length = 997
Score = 311 bits (796), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 240/772 (31%), Positives = 369/772 (47%), Gaps = 124/772 (16%)
Query: 79 VRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP 138
+ V + QAY +I+ G+R CTN G+ + +L T G+S++K+NI VFG L P
Sbjct: 310 TKMVQVLQAYCIISTGIRINCTNQVGQGKRQTILCTNGNSTVKENIAAVFGQKQLQTLIP 369
Query: 139 V-------AICKS----------DSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPK 181
++C+ + + GF+S+ G GR+ +RQ+FF+N RP DL K
Sbjct: 370 FVQLPPSESVCEEYGINYNDTLHNLFSISGFVSRSDHGVGRSTTERQFFFINQRPCDLAK 429
Query: 182 VSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQE 241
+S+LVNE+Y N QYP ++N V + D+NVTPDKR++ +E +L L+ L
Sbjct: 430 ISRLVNEVYHLYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLIG 489
Query: 242 IYSPNNASYSVNKVEQLIEPEKSGPSSGAESCMF-LEQLSPDGNGCIEILNEQQISKGNT 300
++ + VNK+ +P + + C +E+ P+ N I ++ G
Sbjct: 490 MFESD-----VNKLSPNQKPLLDVEGNLLKMCSTEIEKPPPEKNNLI------SLNTGEE 538
Query: 301 PKTVEVDTLHSDALEGLVHSSNENGKGNFTLKAHDDKSADRLSKFNCMKLIGPHNVPTEE 360
+T+ + L +A +H + E N LK H P + P +
Sbjct: 539 KRTLTIARLR-EAFS--LHHTTEQSSPN--LKTHKQ----------------PQDSPRQI 577
Query: 361 N----CPSPSRVMAKNITEDGESDSRSRCIQSSLNKFVTVSKRK--------YESIARPL 408
N C +PS +K I+ D + S+ ++SS + +++ + + S +
Sbjct: 578 NLLSFCSTPSPKNSKRIS-DKQCKSQEEILESSPGRSSSMNPKPVDSDKDSGHSSTSTQS 636
Query: 409 TEMPLLRNQSLH----CQMKKSNSDMDAVDTRSPVRRHLVDDIAKLNKIEPFKCNKADK- 463
E +S H C M + + +T PV + L D N+ +C+ +K
Sbjct: 637 EEGFSTPGRSTHIGRECIMTLTEDYTFSEETVEPVEKSLGSD----NQFSITECSLEEKS 692
Query: 464 VSKEIENILSSEGNTNEKP-REELVTQEKATPLLNVPSIVSSSNDLKKNSEDLSVAASHL 522
+ N+ + +N+ P + + +E A+ +V V +S D +AS +
Sbjct: 693 IENNFRNLPQA---SNDSPLKRKRFKKEMASLNFSVSPKVMNSQD---------CSASQV 740
Query: 523 QFSGSILDAPVPSSSLDICSTLQFSIQDLRKRRQQRLSIMQSSCHTSGSVKMRRCFAAAT 582
+ ++ VP L FS+ L KR QQ Q + R
Sbjct: 741 DVAIKVIKKEVP---------LSFSMSSLTKRLQQLQQQEQQRVKAQNYRRFR------- 784
Query: 583 LELSQPENEERKARALAAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQH 642
++S EN+ AA EL + K+ F M++IGQFNLGFII KL+ DLFI+DQH
Sbjct: 785 AKISPGENQ--------AAEDELRKEISKDMFAEMEIIGQFNLGFIITKLNTDLFIIDQH 836
Query: 643 AADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALA 702
A DEKYNFE L TVL Q L+ P L+LT E + +++I RKNGF D A
Sbjct: 837 ATDEKYNFEMLQLHTVLQGQRLIIPQALNLTAINEAILIENLEIFRKNGFDFVIDELAPV 896
Query: 703 GLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVC-PSRVRAML 761
R +L ++P SK TFG +D+ ++I L+D G +C PSRVR M
Sbjct: 897 TERVKLISLPTSKNWTFGPQDIDEMIFMLSDCPG--------------VMCRPSRVRQMF 942
Query: 762 ASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTI 813
ASRACR S+MIG AL +NEM+K++ H+ ++ PWNCPHGRPTMRH+ L I
Sbjct: 943 ASRACRKSVMIGTALNKNEMKKLISHMGEIEHPWNCPHGRPTMRHIASLNII 994
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 52/67 (77%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IRPI+ +H+IC+GQV+ L +AVKEL+ENS+DAGAT+I++ LKEYG + +V DNG G
Sbjct: 143 IRPIDHKSIHQICSGQVVLSLGTAVKELLENSVDAGATNIDLKLKEYGADLIEVSDNGLG 202
Query: 72 ISPNNFK 78
+ NF+
Sbjct: 203 VEKENFE 209
>gi|302806844|ref|XP_002985153.1| hypothetical protein SELMODRAFT_121896 [Selaginella moellendorffii]
gi|300146981|gb|EFJ13647.1| hypothetical protein SELMODRAFT_121896 [Selaginella moellendorffii]
Length = 722
Score = 266 bits (681), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 123/200 (61%), Positives = 153/200 (76%), Gaps = 9/200 (4%)
Query: 618 KVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEE 677
K+IGQFNLGFII +LD DLFI+DQHA+DEKYNFERLS+STVLN+QPLLRP+ L L+ EE
Sbjct: 529 KIIGQFNLGFIIARLDSDLFIIDQHASDEKYNFERLSKSTVLNRQPLLRPMPLHLSSAEE 588
Query: 678 VVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGE 737
++ S HM++ R+NGF E A G R L AVPFSK +TFGV DV++L+S L+++ G
Sbjct: 589 IIISTHMEVFRQNGFDFTEQEDAPPGQRILLSAVPFSKNVTFGVSDVQELVSLLSEDYGS 648
Query: 738 CSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNC 797
S + V PSRVR+MLASRACRSSIMIGDAL + EM+K++ HLADL++PWNC
Sbjct: 649 SS---------SHLVQPSRVRSMLASRACRSSIMIGDALSKKEMEKVVRHLADLDAPWNC 699
Query: 798 PHGRPTMRHLVDLTTIRKNI 817
PHGRPTMRHL DL +K +
Sbjct: 700 PHGRPTMRHLYDLNAKKKAL 719
Score = 201 bits (511), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 97/178 (54%), Positives = 131/178 (73%), Gaps = 1/178 (0%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
R + + QAYALI+K VR VCTN GK+ +S +L+TQG S +++NI+T+FG CL+P+
Sbjct: 188 RMIAILQAYALISKNVRLVCTNLVGKSSRSTILRTQGGS-VRENIVTIFGPKTMACLDPM 246
Query: 140 AICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQYP 199
I + +EGF+SKPG GSGR DRQ+FFVN RPVDLPK SKL+NELYK NS+QYP
Sbjct: 247 DISLPEDLSIEGFVSKPGSGSGRGSSDRQFFFVNGRPVDLPKFSKLLNELYKSFNSQQYP 306
Query: 200 IAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASYSVNKVEQ 257
+A++NF +PT A DVNVTPDKRK+F E S + LR L +Y+P+ +Y+V++VE+
Sbjct: 307 MAVLNFRLPTTAYDVNVTPDKRKLFLHSESSFMDGLRNALGNLYAPSKYTYAVHEVEE 364
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 59/74 (79%)
Query: 6 PTNSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQV 65
P S I PI+K +HRIC+GQVI DL++AVKELVENSLDAGATSIE+ LKE+G + +V
Sbjct: 5 PARSAPIHPIDKASIHRICSGQVILDLATAVKELVENSLDAGATSIEVKLKEHGGDAIEV 64
Query: 66 VDNGCGISPNNFKV 79
DNG G+S +N++V
Sbjct: 65 SDNGSGVSSDNYQV 78
>gi|413922862|gb|AFW62794.1| hypothetical protein ZEAMMB73_304615 [Zea mays]
Length = 673
Score = 266 bits (679), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 153/380 (40%), Positives = 215/380 (56%), Gaps = 41/380 (10%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
+ + L AYALIAKGVR +CTNT GKN K VVL+TQGSSS+KD IITVFG N + CLEP
Sbjct: 183 KVISLLNAYALIAKGVRLLCTNTVGKNSKMVVLRTQGSSSMKDTIITVFGPNTFKCLEPF 242
Query: 140 AICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQYP 199
++ SD C++EGFLSKPG G+GR+ GDRQ+F+VN RP+D+PKV+KLVNELY+ +N++QYP
Sbjct: 243 SVTTSDGCQIEGFLSKPGPGTGRSSGDRQFFYVNGRPIDMPKVTKLVNELYRSSNAKQYP 302
Query: 200 IAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASYSVNKVEQLI 259
+ I++F +PT + DVN+ PDKRKVFFS E IL +LRE ++ +YSP S+SVN ++
Sbjct: 303 VVILDFHIPTTSYDVNIAPDKRKVFFSSESMILQSLRETVENLYSPQQCSFSVNHIK--- 359
Query: 260 EPEKSGPSSGAESCMFLEQLSPDGNGCIEILNEQQISKGNTPKTVEVDTLHSDALEGLVH 319
+PEK G + ++ + D N + + N P D E V
Sbjct: 360 DPEKEGDA-------VTDRHNEDTNAIVMV---------NVPSYYNNDDNEETDNEDQVS 403
Query: 320 SSNEN----GKGNFTLKAHDDKSADRLSKFNCMKLIGPHNVPTEENCPSPSRVMAKNITE 375
N+ + L ADR + P P E S V+ +N
Sbjct: 404 PENQKLPSVARDASPLSGGTTTQADRSAWLPSFAYDQPKRSPKEGR----SLVLGRNCFR 459
Query: 376 DG--ESDSRSRCIQSSLNKFVTVSKRKYESIARPLTEMPLLRNQSLHCQMKKS------- 426
G + S +QSSL FV+++KRK+E ++E +LR ++ M++S
Sbjct: 460 TGLAAKPTHSSTVQSSLLNFVSLNKRKHEDDCTLISEAAVLRRETCSEHMRRSSLEANFV 519
Query: 427 -----NSDMDAVDTRSPVRR 441
N + D + + SPV R
Sbjct: 520 TPNKQNHEDDCIISESPVLR 539
Score = 129 bits (323), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 57/75 (76%), Positives = 68/75 (90%)
Query: 8 NSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVD 67
+SP I+PI+K VVHRIC+GQVI DLSSAVKELVENSLDAGATS+E++LK YGEEWF+V D
Sbjct: 11 SSPAIKPISKAVVHRICSGQVIFDLSSAVKELVENSLDAGATSVEVSLKAYGEEWFKVAD 70
Query: 68 NGCGISPNNFKVRAV 82
NGCGISP+NF+ A+
Sbjct: 71 NGCGISPSNFRALAL 85
>gi|302772799|ref|XP_002969817.1| hypothetical protein SELMODRAFT_171139 [Selaginella moellendorffii]
gi|300162328|gb|EFJ28941.1| hypothetical protein SELMODRAFT_171139 [Selaginella moellendorffii]
Length = 705
Score = 265 bits (676), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 122/200 (61%), Positives = 152/200 (76%), Gaps = 9/200 (4%)
Query: 618 KVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEE 677
K++GQFNLGFII +LD DLFI+DQHA+DEKYNFERLS+STVLN+QPLLRP+ L L+ EE
Sbjct: 512 KILGQFNLGFIIARLDSDLFIIDQHASDEKYNFERLSKSTVLNRQPLLRPMPLHLSSAEE 571
Query: 678 VVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGE 737
+ S HM++ R+NGF E A G R L AVPFSK +TFGV DV++L+S L+++ G
Sbjct: 572 ITISTHMEVFRQNGFDFTEQEDAPPGQRILLSAVPFSKNVTFGVSDVQELVSLLSEDYGS 631
Query: 738 CSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNC 797
S + V PSRVR+MLASRACRSSIMIGDAL + EM+K++ HLADL++PWNC
Sbjct: 632 SS---------SHLVQPSRVRSMLASRACRSSIMIGDALSKKEMEKVVRHLADLDAPWNC 682
Query: 798 PHGRPTMRHLVDLTTIRKNI 817
PHGRPTMRHL DL +K +
Sbjct: 683 PHGRPTMRHLYDLNAKKKAL 702
Score = 181 bits (459), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 92/178 (51%), Positives = 121/178 (67%), Gaps = 18/178 (10%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
R + + QAYALI+K VR VCTN GK+ +S +L+TQG S +++NI+T+FG CL+P
Sbjct: 188 RMIAILQAYALISKNVRLVCTNLVGKSSRSTILRTQGGS-VRENIVTIFGPKTMACLDP- 245
Query: 140 AICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQYP 199
PG GSGR DRQ+FFVN RPVDLPK SKL+NELYK NS+QYP
Sbjct: 246 ----------------PGSGSGRGSSDRQFFFVNGRPVDLPKFSKLLNELYKSFNSQQYP 289
Query: 200 IAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASYSVNKVEQ 257
+A++NF +PT A DVNVTPDKRK+F E S + LR L +Y+PN +Y+V++VE+
Sbjct: 290 MAVLNFRLPTTAYDVNVTPDKRKLFLHSESSFMDGLRNALGNLYAPNKYTYAVHEVEE 347
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 59/74 (79%)
Query: 6 PTNSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQV 65
P S I PI+K +HRIC+GQVI DL++AVKELVENSLDAGATSIE+ LKE+G + +V
Sbjct: 5 PARSAPIHPIDKASIHRICSGQVILDLATAVKELVENSLDAGATSIEVKLKEHGGDAIEV 64
Query: 66 VDNGCGISPNNFKV 79
DNG G+S +N++V
Sbjct: 65 SDNGSGVSSDNYQV 78
>gi|168067130|ref|XP_001785478.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662920|gb|EDQ49719.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 742
Score = 262 bits (669), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 123/207 (59%), Positives = 153/207 (73%), Gaps = 10/207 (4%)
Query: 619 VIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEV 678
V+GQFNLGF++ KLDQDLFIVDQHA+DEKYNFERL++ST+LN+QPLLRPL L+L+ EEV
Sbjct: 535 VVGQFNLGFVLAKLDQDLFIVDQHASDEKYNFERLTKSTILNKQPLLRPLSLELSAAEEV 594
Query: 679 VASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADN---- 734
+ + H++ R+NGF E+ A G R L AVPFS+ ITFG+ DV++L+ LA+
Sbjct: 595 IVTTHIETFRQNGFDFVENEDAPLGSRLSLSAVPFSQNITFGIGDVQELVGILANGTAPV 654
Query: 735 ------QGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHL 788
G S S K ++ PSRVR MLASRACRSSIMIGDAL + EM+KIL HL
Sbjct: 655 AKPSTTNGTGSQNGSQKGGLLSAIRPSRVRGMLASRACRSSIMIGDALCKKEMEKILCHL 714
Query: 789 ADLNSPWNCPHGRPTMRHLVDLTTIRK 815
ADL++PWNCPHGRPTMRHL DL +R+
Sbjct: 715 ADLDAPWNCPHGRPTMRHLADLEVLRQ 741
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 89/175 (50%), Positives = 121/175 (69%), Gaps = 10/175 (5%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
R + + QAYALIAKGVR CTN GK+ ++ +++TQGS S+KDNII+VFG CLEP+
Sbjct: 177 RLLSVLQAYALIAKGVRIFCTNQVGKSGRTTIVRTQGSGSVKDNIISVFGSKTAACLEPL 236
Query: 140 AICKSDSCKVEGFLSKPGQG-SGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQY 198
+ +S PG+ + R GDRQ+ +VN RPVDLPK++KL+NELY NS Q
Sbjct: 237 NMEQS---------VGPGEWMTHRASGDRQFIYVNGRPVDLPKINKLLNELYGSFNSLQK 287
Query: 199 PIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASYSVN 253
P+A +NFI+ A DVNVTPDKRKVF E ++L AL+E L+ +Y+P+ +Y+VN
Sbjct: 288 PMAFLNFILTPTAYDVNVTPDKRKVFLHTESALLTALKEALECVYTPDKYTYTVN 342
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 56/67 (83%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+PI++ VHRIC+GQV+ DL++AVKELVENSLDAGATSIEI LKEYG +V DNG G
Sbjct: 9 IQPIDRAAVHRICSGQVVLDLATAVKELVENSLDAGATSIEIRLKEYGSVLIEVADNGSG 68
Query: 72 ISPNNFK 78
+SP N++
Sbjct: 69 VSPENYQ 75
>gi|242065626|ref|XP_002454102.1| hypothetical protein SORBIDRAFT_04g024570 [Sorghum bicolor]
gi|241933933|gb|EES07078.1| hypothetical protein SORBIDRAFT_04g024570 [Sorghum bicolor]
Length = 780
Score = 256 bits (653), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 115/186 (61%), Positives = 148/186 (79%), Gaps = 3/186 (1%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
+ + L AYALIAKGVR +CTNT GKN K VVL+TQGSSS+KDNIITVFG N + CLEP
Sbjct: 187 KVISLLNAYALIAKGVRLLCTNTVGKNSKMVVLRTQGSSSMKDNIITVFGPNTFKCLEPF 246
Query: 140 AICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQYP 199
++ SD C++EGFLSKPG G+GR+ GDRQ+F+VN RP+D+PKV+KLVNELYK +N++QYP
Sbjct: 247 SVTTSDGCQIEGFLSKPGPGTGRSSGDRQFFYVNGRPIDMPKVTKLVNELYKSSNAKQYP 306
Query: 200 IAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASYSVNKVEQLI 259
+ I++F +PT + DVNV PDKRKVFFS E IL +LRE ++ +YSP S+SVN ++
Sbjct: 307 VVILDFRIPTTSYDVNVAPDKRKVFFSSESLILQSLREAVENLYSPLQCSFSVNHIK--- 363
Query: 260 EPEKSG 265
+PEK G
Sbjct: 364 DPEKEG 369
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 121/365 (33%), Positives = 173/365 (47%), Gaps = 88/365 (24%)
Query: 381 SRSRCIQSSLNKFVTVSKRKYESIARPLTEMPLLRNQSLHCQMKKS-----------NSD 429
+ S IQSSL FV+++KRK+E ++E P+LR + Q+++S N +
Sbjct: 446 THSSTIQSSLMNFVSLNKRKHEDDCTLISETPVLRRGTCSEQVRRSLESNFVTPEKQNRE 505
Query: 430 MDAVDTRSPV----------RRHLVD-DIAKLNKIEPFKCNKADKVSKEIENILSSEGNT 478
D + + +PV RR D D A NK K D + E + G
Sbjct: 506 DDCIISEAPVLRSGTCSELDRRTSSDVDFASPNK------QKHDDSTFISETPVLRRGTN 559
Query: 479 NEKPREELVTQEKATPLLNVPSIVSSSNDLKKNSEDLSVAASHLQFSGSILDAPVPSSSL 538
+E+ R + A PS+ SS+N++ + + P+ ++SL
Sbjct: 560 SEQVRGASLEANSA------PSLSSSTNNIPE------------------FNLPLETNSL 595
Query: 539 DICSTLQF-SIQ-DLRKRRQQRLSIMQSSCHTSGSVKMR-----------RCFAAATLEL 585
F S++ D+ + ++ SI+ SG + RCF+A+
Sbjct: 596 KQHLPQSFGSVRTDVSPQHSKQPSIVTLGAEVSGPWDVHTTESDVDEHRGRCFSASGAPN 655
Query: 586 SQPENEERKARA---------------LAAATTE-------LERLFRKEDFGRMKVIGQF 623
E+ + A A + A + + L R+ G M V+GQF
Sbjct: 656 KYSESRHQNASADSPLPDAQDYDDGAVVCYAPVQYPIIQFTVAELRRRRKNGYM-VVGQF 714
Query: 624 NLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMH 683
NLGFIIGKLDQDLFIVDQHAADEKYNFE LSQST LN QPLL+PL+LDL+PEEEV+ SM+
Sbjct: 715 NLGFIIGKLDQDLFIVDQHAADEKYNFECLSQSTTLNIQPLLQPLRLDLSPEEEVIVSMN 774
Query: 684 MDIIR 688
M IR
Sbjct: 775 MSTIR 779
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 58/75 (77%), Positives = 69/75 (92%)
Query: 8 NSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVD 67
+SP I+PI+K VVHRIC+GQVI DLSSAVKELVENSLDAGATS+E++LK YGEEWF+VVD
Sbjct: 15 SSPAIKPISKAVVHRICSGQVIFDLSSAVKELVENSLDAGATSVEVSLKAYGEEWFKVVD 74
Query: 68 NGCGISPNNFKVRAV 82
NGCGISP+NF+ A+
Sbjct: 75 NGCGISPSNFQALAL 89
>gi|301112887|ref|XP_002998214.1| mismatch repair endonuclease pms1, putative [Phytophthora infestans
T30-4]
gi|262112508|gb|EEY70560.1| mismatch repair endonuclease pms1, putative [Phytophthora infestans
T30-4]
Length = 686
Score = 247 bits (631), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 136/295 (46%), Positives = 185/295 (62%), Gaps = 21/295 (7%)
Query: 529 LDAPVPSSSLDICSTLQ---FSIQDLRKRRQQRLSIMQSSCHTSGSVKMRRCFAAATLEL 585
L +P+PS + I ST + +S ++ K+RQQ + K R T
Sbjct: 410 LYSPLPSQA--ILSTPEEHAWSFDEMIKQRQQ---YFEEEVEYERKRKTNRLKVPKTCST 464
Query: 586 SQPENEERKARALAAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAAD 645
S +N +AAA L+R+ +KEDF RM+V+GQFNLGFIIGKL DLFI+DQHA+D
Sbjct: 465 SVDDNALETDNEVAAAA--LQRVLKKEDFKRMQVLGQFNLGFIIGKLGNDLFIIDQHASD 522
Query: 646 EKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLR 705
EK+N+E L Q+TV++QQPL+RPL+L+LT EE+V H+ + KNGF+ D A A +
Sbjct: 523 EKFNYETLQQTTVMHQQPLVRPLRLELTAGEEMVILDHLGVFTKNGFTFLVDKDAPATKK 582
Query: 706 FRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRA 765
+L ++PF+K FG ED+++L S L D M+T+ P +V AM ASRA
Sbjct: 583 LKLLSLPFTKHTQFGTEDIRELASLLMDA----------PMNTSTIRLP-KVMAMFASRA 631
Query: 766 CRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKNIDEN 820
CRSSIMIG AL + EMQKI+ +L+ L+ PWNCPHGRPT+RHLVDL + + D N
Sbjct: 632 CRSSIMIGTALHKEEMQKIVRNLSGLDQPWNCPHGRPTLRHLVDLMHLEDSNDSN 686
Score = 142 bits (357), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 69/176 (39%), Positives = 106/176 (60%), Gaps = 7/176 (3%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNV-KSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAIC 142
+ QAYA+ V+ N TGKN + VVL TQ ++ +NI VFG + L +
Sbjct: 180 VLQAYAVSCANVKICVFNITGKNSSRHVVLATQAHQTMGENIANVFGTKFFRTLIRSSTT 239
Query: 143 KSDSC------KVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSR 196
+++ KVEG++SK G G GR+ DRQ+FF+N RP DLPK++K +NE+++ +
Sbjct: 240 ETEDNLSGQERKVEGYVSKVGAGVGRSDNDRQFFFINGRPFDLPKMAKTLNEVWRQYEMK 299
Query: 197 QYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASYSV 252
Q P I+NF++P DVNVTPDKR+ F E I+ A + G+ ++Y P+ +++V
Sbjct: 300 QKPACILNFLLPLGDYDVNVTPDKRETFVKHEAEIIDAFKTGINKLYEPSRGTFTV 355
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 48/58 (82%)
Query: 20 VHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNF 77
V RIC+GQ + DL++AVKELVEN+LDAGAT IE+ LKE+G + F+V DNG G++P N+
Sbjct: 15 VQRICSGQSVVDLATAVKELVENALDAGATQIEVKLKEFGRDAFEVSDNGAGVAPENY 72
>gi|295830057|gb|ADG38697.1| AT4G02460-like protein [Capsella grandiflora]
Length = 199
Score = 233 bits (595), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 109/161 (67%), Positives = 134/161 (83%), Gaps = 1/161 (0%)
Query: 119 SLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVD 178
SLKDNIITVFG++I+ L+PV+I SD C+VEGFLSKPGQG+GRNL DRQYFF+N RPVD
Sbjct: 3 SLKDNIITVFGLSIFTSLQPVSISISDDCRVEGFLSKPGQGTGRNLADRQYFFINGRPVD 62
Query: 179 LPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREG 238
+PKVSKLVNELYK +SR+YP+AI++FIVP ACD+NVTPDKRKVFF+DE S++ +LREG
Sbjct: 63 MPKVSKLVNELYKDTSSRKYPVAILDFIVPGGACDLNVTPDKRKVFFADETSVIGSLREG 122
Query: 239 LQEIYSPNNASYSVNKVEQLIE-PEKSGPSSGAESCMFLEQ 278
L EIYS +NASY+VNK E+ E P+K+G SS E L +
Sbjct: 123 LNEIYSSSNASYTVNKFEENSEQPDKAGVSSLQEKSSLLSK 163
>gi|295830055|gb|ADG38696.1| AT4G02460-like protein [Capsella grandiflora]
Length = 199
Score = 232 bits (591), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 108/161 (67%), Positives = 133/161 (82%), Gaps = 1/161 (0%)
Query: 119 SLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVD 178
SLKDNIITVFG++I+ L+PV+I SD C+VEGFLSKPGQG+GRNL DRQYFF+N RPVD
Sbjct: 3 SLKDNIITVFGLSIFTSLQPVSISISDDCRVEGFLSKPGQGTGRNLADRQYFFINGRPVD 62
Query: 179 LPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREG 238
+PKVSKLVNELYK +SR+YP+AI++FIVP ACD+NVTPDKRKVFF+DE S++ +LREG
Sbjct: 63 MPKVSKLVNELYKDTSSRKYPVAILDFIVPGXACDLNVTPDKRKVFFADETSVIGSLREG 122
Query: 239 LQEIYSPNNASYSVNKVEQLIE-PEKSGPSSGAESCMFLEQ 278
L EIYS +NASY+VN E+ E P+K+G SS E L +
Sbjct: 123 LNEIYSSSNASYTVNXFEENSEQPDKAGVSSLQEKSSLLSK 163
>gi|295830059|gb|ADG38698.1| AT4G02460-like protein [Capsella grandiflora]
Length = 199
Score = 231 bits (588), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 107/160 (66%), Positives = 132/160 (82%), Gaps = 1/160 (0%)
Query: 120 LKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDL 179
LKDNIITVFGM+ + L+PV+I SD C+VEGFLSKPGQG+GRNL DRQYFF+N RPVD+
Sbjct: 4 LKDNIITVFGMSTFTSLQPVSISISDDCRVEGFLSKPGQGTGRNLADRQYFFINGRPVDM 63
Query: 180 PKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGL 239
PKVSKLVNELYK +SR+YP+AI++FIVP ACD+NVTPDKRKVFF+DE S++ +LREGL
Sbjct: 64 PKVSKLVNELYKDTSSRKYPVAILDFIVPGGACDLNVTPDKRKVFFADETSVIGSLREGL 123
Query: 240 QEIYSPNNASYSVNKVEQLIE-PEKSGPSSGAESCMFLEQ 278
EIYS +NASY+VN+ E+ E P+K+G SS E L +
Sbjct: 124 NEIYSSSNASYTVNRFEENSEQPDKAGVSSLQEKSSLLSK 163
>gi|255081839|ref|XP_002508138.1| DNA mismatch repair protein-MLH2/PMS1/Pms2 family [Micromonas sp.
RCC299]
gi|226523414|gb|ACO69396.1| DNA mismatch repair protein-MLH2/PMS1/Pms2 family [Micromonas sp.
RCC299]
Length = 771
Score = 229 bits (585), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 120/227 (52%), Positives = 148/227 (65%), Gaps = 19/227 (8%)
Query: 601 ATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLN 660
AT ELER+FR+EDF M+V+GQFNLGFI+ L DLFIVDQHA+DE YNFERL ++T LN
Sbjct: 544 ATGELERVFRREDFRDMRVVGQFNLGFILCTLGDDLFIVDQHASDEIYNFERLQRTTTLN 603
Query: 661 QQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLR-FRLKAVPFSKKITF 719
+QPLL P KL+LT E +M NGF E +R L +VPFSK ITF
Sbjct: 604 RQPLLVPKKLELTAAETQTVHRNMPTFLANGFGFCEVDQPPPTVRSLALNSVPFSKGITF 663
Query: 720 GVEDVKDLISTLADNQGECSIISSYKMDTADS----------------VCPSRVRAMLAS 763
G +DV +LI L +QGE ++ + ++ S V PSRVRAMLA
Sbjct: 664 GADDVHELIGML--DQGEYALPARSQLTVGLSRQSTGTPGSGLSVSEIVRPSRVRAMLAM 721
Query: 764 RACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
RACRSSIMIG AL M+++L++L+DL +PWNCPHGRPTMRHL DL
Sbjct: 722 RACRSSIMIGKALDAKTMRRVLDNLSDLQAPWNCPHGRPTMRHLADL 768
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/168 (42%), Positives = 95/168 (56%), Gaps = 22/168 (13%)
Query: 84 LCQAYALIAKGVRFVCTNT-TGKNV-KSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAI 141
+ QAYALI R VC++ GKN + VL TQG SL+ + TVFG
Sbjct: 190 ILQAYALINPETRIVCSHQGKGKNAPRQTVLNTQGGGSLRAAVATVFGHKT--------- 240
Query: 142 CKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQ---- 197
++G +SK G GR GDRQ+FFVN RPVDLPK +++ NE Y+ N
Sbjct: 241 -------IDGMVSKAAPGCGRGAGDRQFFFVNGRPVDLPKAARVCNETYRQYNQTTSGTP 293
Query: 198 YPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSP 245
+P +++F +PT A DVNVTPDKRKV E +L LR L++I+SP
Sbjct: 294 FPCVVLDFRLPTDAYDVNVTPDKRKVLLHGESKVLAGLRGALEKIWSP 341
Score = 95.9 bits (237), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 61/81 (75%), Gaps = 4/81 (4%)
Query: 9 SPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDN 68
+P+IRPI VHRIC+GQV+ DL+ AVKELVEN+LDAGAT+IE+ L+++G++ +VVDN
Sbjct: 15 APSIRPIGASSVHRICSGQVVLDLAGAVKELVENALDAGATNIEVRLRDHGQDSVEVVDN 74
Query: 69 GCGISPNNFKVRAVFLCQAYA 89
GCG+ ++ + + YA
Sbjct: 75 GCGVKSDDL----AMMTKKYA 91
>gi|295830065|gb|ADG38701.1| AT4G02460-like protein [Capsella grandiflora]
Length = 199
Score = 229 bits (584), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 107/161 (66%), Positives = 132/161 (81%), Gaps = 1/161 (0%)
Query: 119 SLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVD 178
SLKDNIITVFG++ + L+PV+I SD C+VEGFLSKPGQG+GRNL DRQYFF+N RPVD
Sbjct: 3 SLKDNIITVFGLSXFTSLQPVSISISDDCRVEGFLSKPGQGTGRNLADRQYFFINGRPVD 62
Query: 179 LPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREG 238
+PKVSKLVNELYK +SR+YP+AI++FIVP ACD+NVTPDKRKVFF+DE S++ +LREG
Sbjct: 63 MPKVSKLVNELYKDTSSRKYPVAILDFIVPGGACDLNVTPDKRKVFFADETSVIGSLREG 122
Query: 239 LQEIYSPNNASYSVNKVEQLIE-PEKSGPSSGAESCMFLEQ 278
L EIYS +NASY VN+ E+ E P+K+G SS E L +
Sbjct: 123 LNEIYSSSNASYXVNRFEENSEQPDKAGVSSLQEKSSLLSK 163
>gi|295830063|gb|ADG38700.1| AT4G02460-like protein [Capsella grandiflora]
Length = 199
Score = 229 bits (583), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 106/161 (65%), Positives = 132/161 (81%), Gaps = 1/161 (0%)
Query: 119 SLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVD 178
SLKDNIITVFGM+ + L+PV+I SD C+VEGFLSKPGQG+GRNL DRQYFF+N RPVD
Sbjct: 3 SLKDNIITVFGMSTFTSLQPVSISISDDCRVEGFLSKPGQGTGRNLADRQYFFINGRPVD 62
Query: 179 LPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREG 238
+PKVSKLVNELYK +SR+YP+ I++FIVP ACD+NVTPDKRKVFF+DE S++ +LREG
Sbjct: 63 MPKVSKLVNELYKDTSSRKYPVTILDFIVPGGACDLNVTPDKRKVFFADETSVIGSLREG 122
Query: 239 LQEIYSPNNASYSVNKVEQLIE-PEKSGPSSGAESCMFLEQ 278
L +IYS +NASY+VN+ E+ E P+K+G SS E L +
Sbjct: 123 LNKIYSSSNASYTVNRFEENSEQPDKAGVSSLQEKSSLLSK 163
>gi|345291783|gb|AEN82383.1| AT4G02460-like protein, partial [Capsella rubella]
Length = 198
Score = 228 bits (580), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 106/161 (65%), Positives = 131/161 (81%), Gaps = 1/161 (0%)
Query: 119 SLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVD 178
SLKDNIITVFGM+ + L+PV+I SD +VEGFLSKPGQG+GRNL DRQYFF+N RPVD
Sbjct: 3 SLKDNIITVFGMSTFTSLQPVSISISDDSRVEGFLSKPGQGTGRNLADRQYFFINGRPVD 62
Query: 179 LPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREG 238
+PKVSKLVNELYK +SR+YP+AI++FIVP ACD+NVTPDKRKVFF+DE S++ +LREG
Sbjct: 63 MPKVSKLVNELYKDTSSRKYPVAILDFIVPGGACDLNVTPDKRKVFFADETSVIGSLREG 122
Query: 239 LQEIYSPNNASYSVNKVEQLIE-PEKSGPSSGAESCMFLEQ 278
L +IYS NASY+VN+ E+ E P+K+G SS E L +
Sbjct: 123 LNKIYSSGNASYTVNRFEENSEQPDKAGVSSLQEKSSLLSK 163
>gi|295830061|gb|ADG38699.1| AT4G02460-like protein [Capsella grandiflora]
Length = 199
Score = 228 bits (580), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 106/161 (65%), Positives = 131/161 (81%), Gaps = 1/161 (0%)
Query: 119 SLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVD 178
SLKDNIITVFG + + L+PV+I SD C+VEGFLSKPGQG+GRNL DRQYFF+N RPVD
Sbjct: 3 SLKDNIITVFGXSTFTSLQPVSISISDDCRVEGFLSKPGQGTGRNLADRQYFFINGRPVD 62
Query: 179 LPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREG 238
+PKVSKLVNELYK +SR+YP+AI++FIVP ACD+NVTPDKRKVFF+DE S++ +LRZG
Sbjct: 63 MPKVSKLVNELYKDTSSRKYPVAILDFIVPGGACDLNVTPDKRKVFFADETSVIGSLRZG 122
Query: 239 LQEIYSPNNASYSVNKVEQLIE-PEKSGPSSGAESCMFLEQ 278
L EIYS +NASY VN+ E+ E P+K+G SS E L +
Sbjct: 123 LNEIYSSSNASYIVNRFEENSEQPDKAGVSSLQEKSSLLSK 163
>gi|345291769|gb|AEN82376.1| AT4G02460-like protein, partial [Capsella rubella]
gi|345291771|gb|AEN82377.1| AT4G02460-like protein, partial [Capsella rubella]
gi|345291773|gb|AEN82378.1| AT4G02460-like protein, partial [Capsella rubella]
gi|345291775|gb|AEN82379.1| AT4G02460-like protein, partial [Capsella rubella]
gi|345291777|gb|AEN82380.1| AT4G02460-like protein, partial [Capsella rubella]
gi|345291779|gb|AEN82381.1| AT4G02460-like protein, partial [Capsella rubella]
gi|345291781|gb|AEN82382.1| AT4G02460-like protein, partial [Capsella rubella]
Length = 198
Score = 227 bits (579), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 106/161 (65%), Positives = 131/161 (81%), Gaps = 1/161 (0%)
Query: 119 SLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVD 178
SLKDNIITVFGM+ + L+PV+I SD +VEGFLSKPGQG+GRNL DRQYFF+N RPVD
Sbjct: 3 SLKDNIITVFGMSTFTSLQPVSISISDDSRVEGFLSKPGQGTGRNLADRQYFFINGRPVD 62
Query: 179 LPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREG 238
+PKVSKLVNELYK +SR+YP+AI++FIVP ACD+NVTPDKRKVFF+DE S++ +LREG
Sbjct: 63 MPKVSKLVNELYKDTSSRKYPVAILDFIVPGGACDLNVTPDKRKVFFADETSVIGSLREG 122
Query: 239 LQEIYSPNNASYSVNKVEQLIE-PEKSGPSSGAESCMFLEQ 278
L +IYS NASY+VN+ E+ E P+K+G SS E L +
Sbjct: 123 LNKIYSSRNASYTVNRFEENSEQPDKAGVSSLQEKSSLLSK 163
>gi|295830067|gb|ADG38702.1| AT4G02460-like protein [Neslia paniculata]
Length = 199
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 105/154 (68%), Positives = 128/154 (83%), Gaps = 1/154 (0%)
Query: 119 SLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVD 178
SLKDNIITVFGM+ + L+PV+I SD C+VEGFLSKPGQG+GRNL DRQY F+N RPVD
Sbjct: 3 SLKDNIITVFGMSTFTSLQPVSISISDDCRVEGFLSKPGQGTGRNLADRQYLFINGRPVD 62
Query: 179 LPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREG 238
+PKVSKLVNELYK +SR+YP+ I++FIVP ACD+NVTPDKRKVFFSDE S++ +LR G
Sbjct: 63 MPKVSKLVNELYKDTSSRKYPVVILDFIVPGGACDLNVTPDKRKVFFSDETSVIGSLRGG 122
Query: 239 LQEIYSPNNASYSVNKVEQLIE-PEKSGPSSGAE 271
L EIYS +NASY+VN+ E+ E P+K+G SS E
Sbjct: 123 LNEIYSSSNASYTVNRFEENSEQPDKAGVSSLQE 156
>gi|410896097|ref|XP_003961536.1| PREDICTED: mismatch repair endonuclease PMS2-like [Takifugu
rubripes]
Length = 837
Score = 223 bits (569), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 124/271 (45%), Positives = 163/271 (60%), Gaps = 29/271 (10%)
Query: 544 LQFSIQDLRKRRQQRLSIMQSSCHTSGSVKMRRCFAAATLELSQPENEERKARALAAATT 603
LQFS+Q+L + +RL Q+ K C+ +++ EN+ +A
Sbjct: 594 LQFSLQELAAK-MKRLQDQQAH-----RAKEDLCYRRFKAKINPGENQ--------SAEA 639
Query: 604 ELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQP 663
EL++ KE F M++IGQFNLGFII KL+ D+FI+DQHA DEKYNFE L Q TVL Q
Sbjct: 640 ELKKEISKEMFKDMEIIGQFNLGFIIAKLESDIFIIDQHATDEKYNFEMLQQHTVLQGQK 699
Query: 664 LLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVED 723
L+ P KL LT E ++DI RKNGF + D A A R +L ++P SK TFG D
Sbjct: 700 LIAPQKLHLTAVSENTLIDNIDIFRKNGFEFQVDEDAQAMERVKLLSLPTSKNWTFGPAD 759
Query: 724 VKDLISTLADNQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGRNEMQ 782
+++LI L+D+ G +C PSRVR M ASRACR S+MIG AL NEM+
Sbjct: 760 IEELIFMLSDSPG--------------VMCRPSRVRQMFASRACRKSVMIGTALSVNEMK 805
Query: 783 KILEHLADLNSPWNCPHGRPTMRHLVDLTTI 813
K+L H+ ++ PWNCPHGRPTMRHL++L I
Sbjct: 806 KLLVHMGEIEHPWNCPHGRPTMRHLINLDII 836
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 109/211 (51%), Gaps = 22/211 (10%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMN-------- 131
+ + + Q+Y +I+ GVR C+N G+ +S VL T S S++DNI +FG
Sbjct: 174 KMIHILQSYCIISTGVRITCSNQNGQGKRSTVLSTSSSQSIRDNIGAIFGPKQLQSLLPF 233
Query: 132 -----IYNCLEPVAICKSDSCK----VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKV 182
N +E + +D K + GF+S+ G GR+ DRQ+FF+N+RP D KV
Sbjct: 234 QQASPTENVIEEYCLSGADLPKQLFLITGFVSRGDHGVGRSATDRQFFFINNRPCDPVKV 293
Query: 183 SKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEI 242
KLVNE+Y N QYP +N V + DVNVTPDKR++F +E +L L+ L +
Sbjct: 294 IKLVNEVYHMYNRHQYPFVALNISVASECVDVNVTPDKRQIFLQEEKLLLAVLKSSLISM 353
Query: 243 YSPNNASYSVNKVEQLIEPEKSGPSSGAESC 273
Y VNK+ S +S ++ C
Sbjct: 354 YEAG-----VNKISLNFSSLPSANTSASDIC 379
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 53/68 (77%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
TI+ I+K VH+IC+GQV+ L++AVKELVENS+DAGAT+I++ LK+ G + +V DNG
Sbjct: 5 TIKAIDKHSVHQICSGQVVLTLATAVKELVENSIDAGATNIDVRLKDCGADLVEVSDNGK 64
Query: 71 GISPNNFK 78
G+ NF+
Sbjct: 65 GVEEANFE 72
>gi|440799068|gb|ELR20129.1| DNA mismatch repair protein, C-terminal domain containing protein
[Acanthamoeba castellanii str. Neff]
Length = 1076
Score = 223 bits (568), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 115/227 (50%), Positives = 148/227 (65%), Gaps = 26/227 (11%)
Query: 599 AAATTELERLFRKEDFG-----------RMKVIGQFNLGFIIGKLDQDLFIVDQHAADEK 647
AAA EL R+F+K F R ++IGQFNLGFII KLDQD+FI+DQHA+DEK
Sbjct: 822 AAAEEELRRVFKKSFFDDLQVILTVLVLRGQIIGQFNLGFIIAKLDQDVFIIDQHASDEK 881
Query: 648 YNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFR 707
YN+E L Q+TV+N QPLL PL ++LT EE + + ++ RKNGF D A + +
Sbjct: 882 YNYETLQQTTVINTQPLLSPLSMELTAVEESIVMDNREMFRKNGFHFVIDEQAPPRQQVK 941
Query: 708 LKAVPFSKKITFGVEDVKDLISTLADNQG-ECSIISSYKMDTADSVCPSRVRAMLASRAC 766
L +VPFSK FGVEDV +LI L ++ G C + SRV AM ASRAC
Sbjct: 942 LASVPFSKNKQFGVEDVHELICQLEEHPGMMCRL--------------SRVSAMFASRAC 987
Query: 767 RSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTI 813
RS+IMIG AL + EM+++L ++ L +PW+CPHGRPTMRHL DL+TI
Sbjct: 988 RSAIMIGTALSKKEMKRVLHNMTLLENPWSCPHGRPTMRHLFDLSTI 1034
Score = 132 bits (332), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 71/179 (39%), Positives = 103/179 (57%), Gaps = 9/179 (5%)
Query: 79 VRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP 138
R V + QAY++I VR C N K + VL T GS LKDNI+ VFG + + P
Sbjct: 161 ARLVSVLQAYSIITTNVRITCQNQKDKGPSTRVLGTSGSG-LKDNIVNVFGPKLVAHIMP 219
Query: 139 V---AICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANS 195
+ I + +VE K G+GRN GDRQ+ ++N RPVD K+ K++N++Y+ AN
Sbjct: 220 IDLPGITYTTRKRVE----KSFGGTGRNTGDRQFLYINSRPVDHSKIVKVINDVYRQANP 275
Query: 196 RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNA-SYSVN 253
Q I +NF + T + DVNVTPDKR + DE I+ AL+ L++ Y + + +Y +N
Sbjct: 276 GQSAIFFLNFALETDSYDVNVTPDKRTIMLHDESDIVQALKAALEKFYGISESHAYGLN 334
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 49/80 (61%)
Query: 21 HRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFKVR 80
H++ V+ DL+ AVKELVENS+DAGAT+IEI L+ GE +V DNG G+ P N+
Sbjct: 3 HKLNRLIVVIDLAGAVKELVENSVDAGATNIEIRLRNSGESSVEVSDNGHGVDPTNYPFI 62
Query: 81 AVFLCQAYALIAKGVRFVCT 100
A C + +++V T
Sbjct: 63 AKKHCTSKLRAFDDLQWVST 82
>gi|47226069|emb|CAG04443.1| unnamed protein product [Tetraodon nigroviridis]
Length = 866
Score = 223 bits (568), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 120/274 (43%), Positives = 167/274 (60%), Gaps = 29/274 (10%)
Query: 544 LQFSIQDLRKRRQQRLSIMQSSCHTSGSVKMRRCFAAATLELSQPENEERKARALAAATT 603
LQFS+++L + ++ ++ H + K C+ ++S EN+ +A
Sbjct: 621 LQFSLRELAGKMKR---LLDQQAHRA---KEDLCYRRFRAKISPGENQ--------SAEA 666
Query: 604 ELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQP 663
EL++ RK+ F M++IGQFNLGFII KL+ D+FI+DQHA DEKYNFE L Q TVL Q
Sbjct: 667 ELKKEIRKDMFKDMEIIGQFNLGFIIAKLNSDVFIIDQHATDEKYNFEMLQQHTVLQGQK 726
Query: 664 LLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVED 723
L+ P KL LT E + ++DI RKNGF + D A A R +L ++P SK TFG D
Sbjct: 727 LIAPQKLHLTAVSENILMENIDIFRKNGFEFQVDEDAQAMERVKLTSLPTSKNWTFGPAD 786
Query: 724 VKDLISTLADNQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGRNEMQ 782
+++LI L+D+ G +C PSRVR M ASRACR S+MIG AL EM+
Sbjct: 787 IEELIFMLSDSPG--------------VMCRPSRVRQMFASRACRKSVMIGTALSLTEMK 832
Query: 783 KILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKN 816
K+L H+ ++ PWNCPHGRPTMRHL++L + ++
Sbjct: 833 KLLVHMGEMEHPWNCPHGRPTMRHLINLDIVSQD 866
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 67/199 (33%), Positives = 96/199 (48%), Gaps = 49/199 (24%)
Query: 79 VRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMN------- 131
+ + + Q+Y +I+ GVR C+N G+ +S VL T GS S++DNI +FG
Sbjct: 171 AKMIHILQSYCIISTGVRITCSNQNGQGKRSTVLSTSGSQSIRDNIGAIFGPKQLQSLLP 230
Query: 132 ------IYNCLEPVAICKSDSCK----VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPK 181
N +E + +D K + GF+S+ G+GR+ DRQ++F+N+RP D K
Sbjct: 231 FQQACPTENVIEEFGLSGADLPKQLFCITGFVSRGDHGAGRSASDRQFYFINNRPCDPVK 290
Query: 182 VSKLVNELYKGANSRQYPIAIMNFIVPT-----------RAC------------------ 212
V KLVNE+Y N QYP +N V + RA
Sbjct: 291 VMKLVNEVYHMYNRHQYPFVALNISVASGKQAASLRVAKRAAGSLFLSVSSLYLSSPVSS 350
Query: 213 ---DVNVTPDKRKVFFSDE 228
DVNVTPDKR+VF +E
Sbjct: 351 ECVDVNVTPDKRQVFLQEE 369
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 53/68 (77%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
+I+ I+K VH+IC+GQV+ L++AVKELVENS+DAGAT+I++ LK+ G + +V DNG
Sbjct: 3 SIKAIDKHSVHQICSGQVVLTLATAVKELVENSIDAGATNIDVRLKDCGADLVEVSDNGK 62
Query: 71 GISPNNFK 78
G+ NF+
Sbjct: 63 GVEEANFE 70
>gi|156363567|ref|XP_001626114.1| predicted protein [Nematostella vectensis]
gi|156212978|gb|EDO34014.1| predicted protein [Nematostella vectensis]
Length = 775
Score = 222 bits (566), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 121/271 (44%), Positives = 165/271 (60%), Gaps = 33/271 (12%)
Query: 544 LQFSIQDLRKRRQQRLSIMQSSCHTSGSVKMRRCFAAATLELSQPENEERKARALAAATT 603
++FSI+ LR L + +S +G V++ R + PEN +AA
Sbjct: 532 VEFSIEKLRTC----LHSLNTSITQNGKVRIFRAKIS-------PENN-------SAAEE 573
Query: 604 ELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQP 663
EL R ++ F RM+++GQFNLGFI+ KLD DLFI+DQHA+DEKYNFE ++TVL Q
Sbjct: 574 ELTRNIQRGSFARMEIVGQFNLGFILAKLDNDLFIIDQHASDEKYNFEMQQRNTVLRNQR 633
Query: 664 LLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVED 723
L+ P KL+LT E + +++I RKNGF + D A A + +L +VP SK TFGVED
Sbjct: 634 LIIPRKLELTAVNESILLDNLEIFRKNGFEFQIDDDAPATQKVKLVSVPTSKNWTFGVED 693
Query: 724 VKDLISTLADNQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGRNEMQ 782
V++LI L+D G +C P+RVR M ASRACR SIM+G AL +MQ
Sbjct: 694 VEELIFMLSDAPG--------------ILCRPTRVRKMFASRACRMSIMVGTALSHAQMQ 739
Query: 783 KILEHLADLNSPWNCPHGRPTMRHLVDLTTI 813
I+ H+ ++ PWNCPHGRPTMRH+V+L +
Sbjct: 740 GIVRHMGEMKHPWNCPHGRPTMRHVVNLAML 770
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/195 (39%), Positives = 111/195 (56%), Gaps = 21/195 (10%)
Query: 79 VRAVFLCQAYALIAKGVRFVCTN-TTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLE 137
V+ V + Q Y LI+ G R CTN +G+ +S V+ T GSS +KDNI VFG L
Sbjct: 183 VKLVHVLQGYCLISAGTRITCTNHVSGR--RSTVVSTHGSSQIKDNITAVFGPKQVQSLL 240
Query: 138 P------------------VAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDL 179
P V+ +++ + GF+SK GSGR+ DRQ+FF+N RP DL
Sbjct: 241 PFKQLQPSEEDCTELNLSVVSNSETNPFTITGFISKADHGSGRSSSDRQFFFINKRPCDL 300
Query: 180 PKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGL 239
PKVS++V+E+Y N Q+P +++ + A DVNVTPDKR+VF E +L LR L
Sbjct: 301 PKVSRVVSEVYHMYNRHQFPFVMLDISLKRDAVDVNVTPDKRQVFLQQETLLLATLRTSL 360
Query: 240 QEIYSPNNASYSVNK 254
+++ P ++Y VN+
Sbjct: 361 IKMFDPGTSTYEVNQ 375
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 57/70 (81%)
Query: 9 SPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDN 68
+P++ PI++ VH+IC+GQV+ +L++A+KEL+ENSLDAGATS+++ LKE+G +V DN
Sbjct: 13 APSVLPIDRKSVHQICSGQVVLNLATAMKELLENSLDAGATSVDVRLKEHGSHSIEVSDN 72
Query: 69 GCGISPNNFK 78
G G+ P NF+
Sbjct: 73 GAGVEPQNFE 82
>gi|194882839|ref|XP_001975517.1| GG22356 [Drosophila erecta]
gi|190658704|gb|EDV55917.1| GG22356 [Drosophila erecta]
Length = 888
Score = 221 bits (564), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 120/258 (46%), Positives = 155/258 (60%), Gaps = 31/258 (12%)
Query: 580 AATLELSQPENEERKARALA---------------AATTELERLFRKEDFGRMKVIGQFN 624
A++L+ + +R+ARA +A EL+R KEDF RM++IGQFN
Sbjct: 638 ASSLKAHEQHQRDRRARAKLQRLRFKTEINPNQNNSAEAELQREIDKEDFARMEIIGQFN 697
Query: 625 LGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHM 684
LGFII KL+ DLFIVDQHA DEKYNFE L ++T L Q L P L+LT E+V H+
Sbjct: 698 LGFIIVKLEDDLFIVDQHATDEKYNFETLQRTTQLEYQRLTVPQSLELTAVNEMVLLNHI 757
Query: 685 DIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSY 744
D+ KNGF E D A A + RL P SK+ FG ED+ +LI L D
Sbjct: 758 DVFEKNGFKFEVDHEAPATKKVRLLGKPHSKRWEFGKEDIDELIFMLQDA---------- 807
Query: 745 KMDTADSVC-PSRVRAMLASRACRSSIMIGDALGRN-EMQKILEHLADLNSPWNCPHGRP 802
++C PSRVRAM ASRACR S+MIG AL RN M++++ + ++ PWNCPHGRP
Sbjct: 808 ---PEGTICRPSRVRAMFASRACRKSVMIGTALNRNTTMRRLITQMGEIEQPWNCPHGRP 864
Query: 803 TMRHLVDLTTIRKNIDEN 820
TMRHL+++T + N DEN
Sbjct: 865 TMRHLINITMLMDN-DEN 881
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/264 (31%), Positives = 132/264 (50%), Gaps = 46/264 (17%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV---- 139
+ QAY L+ KGVR +C+N T K K+VVL+T G + NI +FG L P+
Sbjct: 199 ILQAYCLVTKGVRILCSNHTPKGAKTVVLQTHGDHEVMANISAIFGTRQAADLVPLKSPF 258
Query: 140 -------AICKSD--SC------------------------KVEGFLSKPGQGSGRNLGD 166
A +SD SC K+EGF+S G+GR+ D
Sbjct: 259 GDRQLSEAELRSDLESCADVADTNCPQFSAEDVERLNQADIKLEGFISSCRHGAGRSSRD 318
Query: 167 RQYFFVNDRPVDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFS 226
RQ+FFVN RP D ++K++NE+Y N +Q P +N + DVN+TPDKR++ +
Sbjct: 319 RQFFFVNSRPCDPKNIAKVMNEVYHRYNVQQQPFIYLNIVTARSDVDVNLTPDKRQLLIN 378
Query: 227 DECSILHALREGLQEIYSPNNASYSVNK--VEQLIEPEKSGPSSGAESCMFLEQLSPDGN 284
+E +L AL++ L + + A++ + + ++EP K+ P + F E+LS +
Sbjct: 379 NERILLLALKKSLLDTFGQTPATFQMQNTTIVSMLEP-KTNP----DKTKFQEELSKENK 433
Query: 285 GCIEILNEQQISKGNTPKTVEVDT 308
E +E+ + +T + ++V T
Sbjct: 434 N--EEASEEDVPTTSTQRFMDVLT 455
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 53/79 (67%), Gaps = 2/79 (2%)
Query: 2 DVETPTN--SPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYG 59
D+ PT S I+ I K VH+IC+GQV+ L+ AVKELVENS+DAGAT +EI LK+ G
Sbjct: 15 DIPPPTTALSGQIKAIAKDTVHKICSGQVVLSLAVAVKELVENSIDAGATLVEIKLKDQG 74
Query: 60 EEWFQVVDNGCGISPNNFK 78
+ +V DNG G+ N +
Sbjct: 75 LQGVEVSDNGSGVEEMNLE 93
>gi|157124912|ref|XP_001660584.1| DNA mismatch repair protein pms2 [Aedes aegypti]
gi|108873824|gb|EAT38049.1| AAEL010033-PA [Aedes aegypti]
Length = 874
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 107/217 (49%), Positives = 144/217 (66%), Gaps = 15/217 (6%)
Query: 600 AATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVL 659
AA EL+ K+ F +M++IGQFNLGFII +L+QDLFI+DQHA DEKYNFE L ++TVL
Sbjct: 662 AAEDELQTEISKDRFAQMEIIGQFNLGFIIARLEQDLFIIDQHATDEKYNFEDLQRTTVL 721
Query: 660 NQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITF 719
Q L+ P +L+LT E++ +++I NGF E D A + +L A PFSK F
Sbjct: 722 QNQKLVVPQQLELTAVNEMILMDNLEIFEMNGFKFEIDGSAEPTRKVKLVAKPFSKNWEF 781
Query: 720 GVEDVKDLISTLADNQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGR 778
G ED+ +LI L D +SVC PSRVRAM ASRACR S+MIG AL +
Sbjct: 782 GKEDIDELIFML--------------QDAPNSVCRPSRVRAMFASRACRKSVMIGKALSK 827
Query: 779 NEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRK 815
EM++++ H+ ++ PWNCPHGRPTMRHLV+L+ +++
Sbjct: 828 AEMRRLVSHMGEIEQPWNCPHGRPTMRHLVNLSMLQQ 864
Score = 122 bits (307), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 113/213 (53%), Gaps = 32/213 (15%)
Query: 76 NFKVRAVFLCQ---AYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFG--- 129
N K + +CQ AY L++ GVR +C+N K VKSV++ TQGS+S+ DNI TVFG
Sbjct: 181 NIKREFIKMCQILQAYCLVSVGVRIICSNQNKKGVKSVIMSTQGSNSVLDNITTVFGSKQ 240
Query: 130 -------------------MNIYNCLEPVAICKSDSCK-------VEGFLSKPGQGSGRN 163
+N + + +++ + + K +EG++S GSGR+
Sbjct: 241 STELIQLKPAISSSGKILDLNESDFDDTLSLTQEEVDKLNLSRYTIEGYISSCAHGSGRS 300
Query: 164 LGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKV 223
DRQ+FFVN RP + + K+VNE Y N Q P +N + DVN+TPDKR++
Sbjct: 301 SKDRQFFFVNSRPCEPKAIIKMVNETYHKYNVNQCPFVYLNLKMARSDVDVNLTPDKRQI 360
Query: 224 FFSDECSILHALREGLQEIYSPNNASYSVNKVE 256
++E +L AL++ L + Y +++ + ++
Sbjct: 361 LVNNEKILLLALKKSLMKTYGTIPSTFKMQNLD 393
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 56/76 (73%), Gaps = 2/76 (2%)
Query: 5 TPT--NSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEW 62
TPT +S I I++ VHRIC+GQV+ +L++AVKELVEN++DAGAT +E+ LKE G +
Sbjct: 11 TPTSEDSKKISAIDRDTVHRICSGQVVLNLATAVKELVENAIDAGATVVEVKLKEQGADL 70
Query: 63 FQVVDNGCGISPNNFK 78
+V DNG G+ NF+
Sbjct: 71 VEVSDNGSGVEEKNFE 86
>gi|157136917|ref|XP_001663861.1| DNA mismatch repair protein pms2 [Aedes aegypti]
gi|108869823|gb|EAT34048.1| AAEL013690-PA [Aedes aegypti]
Length = 926
Score = 221 bits (562), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 107/217 (49%), Positives = 144/217 (66%), Gaps = 15/217 (6%)
Query: 600 AATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVL 659
AA EL+ K+ F +M++IGQFNLGFII +L+QDLFI+DQHA DEKYNFE L ++TVL
Sbjct: 714 AAEDELQTEISKDRFAQMEIIGQFNLGFIIARLEQDLFIIDQHATDEKYNFEDLQRTTVL 773
Query: 660 NQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITF 719
Q L+ P +L+LT E++ +++I NGF E D A + +L A PFSK F
Sbjct: 774 QNQKLVVPQQLELTAVNEMILMDNLEIFEMNGFKFEIDGSAEPTRKVKLVAKPFSKNWEF 833
Query: 720 GVEDVKDLISTLADNQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGR 778
G ED+ +LI L D +SVC PSRVRAM ASRACR S+MIG AL +
Sbjct: 834 GKEDIDELIFML--------------QDAPNSVCRPSRVRAMFASRACRKSVMIGKALSK 879
Query: 779 NEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRK 815
EM++++ H+ ++ PWNCPHGRPTMRHLV+L+ +++
Sbjct: 880 AEMRRLVSHMGEIEQPWNCPHGRPTMRHLVNLSMLQQ 916
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 108/213 (50%), Gaps = 32/213 (15%)
Query: 76 NFKVRAVFLCQ---AYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNI 132
N K + +CQ AY L++ GVR +C+N K VKSV++ TQGS+S+ DNI TVFG
Sbjct: 225 NIKREFIKMCQILQAYCLVSVGVRIICSNQNKKGVKSVIMSTQGSNSVLDNITTVFGSKQ 284
Query: 133 YNCLEPVAICKSDSCKV-----------------------------EGFLSKPGQGSGRN 163
L + S S K+ EG++S GSGR+
Sbjct: 285 STELVQLKPAISSSGKILDLNESDFDDTLSLTQEEVDKLNLSRYTIEGYISSCAHGSGRS 344
Query: 164 LGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKV 223
DRQ+FFVN RP + + K+VNE Y N Q P +N + DVN+TPDKR++
Sbjct: 345 SKDRQFFFVNSRPCEPKAIIKMVNETYHKYNVNQCPFVYLNLKMARSDVDVNLTPDKRQI 404
Query: 224 FFSDECSILHALREGLQEIYSPNNASYSVNKVE 256
++E +L AL++ L + Y +++ + ++
Sbjct: 405 LVNNEKILLLALKKSLMKTYGTIPSTFKMQNLD 437
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 56/76 (73%), Gaps = 2/76 (2%)
Query: 5 TPT--NSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEW 62
TPT +S I I++ VHRIC+GQV+ +L++AVKELVEN++DAGAT +E+ LKE G +
Sbjct: 55 TPTSEDSKKISAIDRDTVHRICSGQVVLNLATAVKELVENAIDAGATVVEVKLKEQGADL 114
Query: 63 FQVVDNGCGISPNNFK 78
+V DNG G+ NF+
Sbjct: 115 VEVSDNGSGVEEKNFE 130
>gi|195488586|ref|XP_002092377.1| GE14157 [Drosophila yakuba]
gi|194178478|gb|EDW92089.1| GE14157 [Drosophila yakuba]
Length = 899
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 113/223 (50%), Positives = 143/223 (64%), Gaps = 16/223 (7%)
Query: 600 AATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVL 659
+A EL+R KEDF RM++IGQFNLGFII KL+ DLFIVDQHA DEKYNFE L ++T L
Sbjct: 684 SAEAELQREIDKEDFARMEIIGQFNLGFIIVKLEDDLFIVDQHATDEKYNFETLQRTTQL 743
Query: 660 NQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITF 719
Q L P L+LT E+V H+D+ KNGF + D A A + RL P SK+ F
Sbjct: 744 EYQRLTVPQSLELTAVNEMVLLNHIDVFEKNGFKFQVDHEAPATKKVRLLGKPHSKRWEF 803
Query: 720 GVEDVKDLISTLADNQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGR 778
G ED+ +LI L D ++C PSRVRAM ASRACR S+MIG AL R
Sbjct: 804 GKEDIDELIFMLQDA-------------PEGTICRPSRVRAMFASRACRKSVMIGTALNR 850
Query: 779 NE-MQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKNIDEN 820
N M++++ + ++ PWNCPHGRPTMRHL+++T + N DEN
Sbjct: 851 NTTMRRLITQMGEIEQPWNCPHGRPTMRHLINITMLMDN-DEN 892
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 89/182 (48%), Gaps = 37/182 (20%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV---- 139
+ QAY L+ KGVR +C+N T K K+VVL+T G + NI +FG L P+
Sbjct: 199 ILQAYCLVTKGVRILCSNHTPKGAKTVVLQTHGDQEVMANISAIFGARQATELVPLKSPF 258
Query: 140 --------------------------AICKSD-------SCKVEGFLSKPGQGSGRNLGD 166
IC D ++EGF+S G+GR+ D
Sbjct: 259 GQGQLSEAELRADLESCADVADTTCPQICAEDVERLNQADFQLEGFISSCRHGAGRSSRD 318
Query: 167 RQYFFVNDRPVDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFS 226
RQ+FFVN RP D ++K++NE+Y N +Q P +N + DVN+TPDKR++ +
Sbjct: 319 RQFFFVNSRPCDPKNIAKVMNEVYHRYNVQQQPFIYLNIVTARSDVDVNLTPDKRQLLIN 378
Query: 227 DE 228
+E
Sbjct: 379 NE 380
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 54/79 (68%), Gaps = 2/79 (2%)
Query: 2 DVETPT--NSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYG 59
DV PT +S I+ I K VH+IC+GQV+ L+ AVKELVENS+DAGAT +EI LK+ G
Sbjct: 15 DVPPPTTVSSGQIKAIAKDTVHKICSGQVVLSLAVAVKELVENSIDAGATLVEIKLKDQG 74
Query: 60 EEWFQVVDNGCGISPNNFK 78
+ +V DNG G+ N +
Sbjct: 75 LQGVEVSDNGSGVEEMNLE 93
>gi|387219323|gb|AFJ69370.1| hypothetical protein NGATSA_3015800, partial [Nannochloropsis
gaditana CCMP526]
Length = 225
Score = 219 bits (559), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 107/215 (49%), Positives = 143/215 (66%), Gaps = 1/215 (0%)
Query: 600 AATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVL 659
AA R+ K R+ V+GQFNLGFII ++ D+FI+DQHA DEKYNFE L +T L
Sbjct: 11 AAARVFSRVLTKSHLKRLVVLGQFNLGFIIARIGADVFILDQHACDEKYNFETLQSTTTL 70
Query: 660 NQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITF 719
++Q L+ P L+L+ EEVV H+ + NGFS DP A R +L ++P+SK I F
Sbjct: 71 HEQRLIAPKPLELSAMEEVVILEHLPTFKANGFSFRLDPEAGPMERIKLLSLPYSKGIQF 130
Query: 720 GVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRN 779
G++D+ +L S L D+ C + A SV ++RAM ASRACR SIMIG AL R+
Sbjct: 131 GLQDIHELASLLGDSS-FCGGVEEGAEGPAPSVRLPKIRAMFASRACRMSIMIGKALTRS 189
Query: 780 EMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIR 814
+MQK++ +LA++ PWNCPHGRPTMRHLVDL+T+R
Sbjct: 190 QMQKVVANLAEIEQPWNCPHGRPTMRHLVDLSTLR 224
>gi|169642755|gb|AAI60858.1| Pms2 protein [Rattus norvegicus]
Length = 853
Score = 219 bits (559), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 115/238 (48%), Positives = 149/238 (62%), Gaps = 21/238 (8%)
Query: 586 SQPENEERKARAL------AAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIV 639
S+ E+ RK RA AA EL R RK F M+++GQFNLGFI+ KL +DLF+V
Sbjct: 630 SKSEHNYRKFRAKICPGENQAAEDELRREIRKSMFAEMEILGQFNLGFIVTKLKEDLFLV 689
Query: 640 DQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPH 699
DQHAADEKYNFE L Q TVL Q L+ P L+LT E V +++I RKNGF D
Sbjct: 690 DQHAADEKYNFEMLQQHTVLQAQRLITPQTLNLTAVNEAVLIENLEIFRKNGFDFIIDED 749
Query: 700 ALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVC-PSRVR 758
A R +L ++P SK TFG +D+ +LI L+D+ G +C PSRVR
Sbjct: 750 APVTERAKLISLPTSKNWTFGPQDIDELIFMLSDSPG--------------VMCRPSRVR 795
Query: 759 AMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKN 816
M ASRACR S+MIG AL +EM+K++ H+ +++ PWNCPHGRPTMRH+ +L I +N
Sbjct: 796 QMFASRACRKSVMIGTALSASEMKKLISHMGEMDHPWNCPHGRPTMRHIANLDVISQN 853
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 107/192 (55%), Gaps = 17/192 (8%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP- 138
+ V + QAY +I+ G+R CTN G+ + V+ T GSS +K+NI +VFG L P
Sbjct: 183 KMVQVLQAYCIISAGIRVSCTNQLGQGKRQPVVCTSGSSGMKENIGSVFGQKQLQSLVPF 242
Query: 139 VAICKSDSC----------------KVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKV 182
V + SDS ++ GF+S+ G+GR+ DRQ+FF+N RP D KV
Sbjct: 243 VQLPPSDSVCEEYCLSACGTPQSPFRISGFISQCTHGAGRSSTDRQFFFINQRPCDPAKV 302
Query: 183 SKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEI 242
S+LVNE+Y N QYP ++N V + D+NVTPDKR++ +E +L L+ L +
Sbjct: 303 SRLVNEVYHMYNRHQYPFVVLNVSVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLMGM 362
Query: 243 YSPNNASYSVNK 254
+ + SVN+
Sbjct: 363 FDSDANKLSVNQ 374
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 56/71 (78%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+PI+ VH+IC+GQV+ LS+AVKEL+ENS+DAGATSI++ LK+YG + +V DNGCG
Sbjct: 15 IKPIDGKSVHQICSGQVVLSLSTAVKELIENSVDAGATSIDLRLKDYGVDLIEVSDNGCG 74
Query: 72 ISPNNFKVRAV 82
+ NF+ A+
Sbjct: 75 VEEENFEGLAL 85
>gi|158286232|ref|XP_308635.4| AGAP007126-PA [Anopheles gambiae str. PEST]
gi|157020370|gb|EAA04111.4| AGAP007126-PA [Anopheles gambiae str. PEST]
Length = 882
Score = 219 bits (558), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 107/217 (49%), Positives = 140/217 (64%), Gaps = 15/217 (6%)
Query: 600 AATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVL 659
AA EL+ K+DF +M+++GQFNLGFII +L DLFIVDQHA DEKYNFE L ++TVL
Sbjct: 661 AAENELQTEITKDDFAKMEIVGQFNLGFIIVRLGDDLFIVDQHATDEKYNFEDLQRTTVL 720
Query: 660 NQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITF 719
Q L+ P L+LT E+V ++D+ NGF E D A + RL A P+S+ F
Sbjct: 721 QNQRLVVPQPLELTAVNEMVLIDNLDVFEMNGFKFEVDGAAPTTKKVRLMAKPYSRNWEF 780
Query: 720 GVEDVKDLISTLADNQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGR 778
G ED+ +LI + D +VC PSRVRAM ASRACR S+MIG AL
Sbjct: 781 GKEDIDELIFMM--------------QDAPSTVCRPSRVRAMFASRACRKSVMIGRALSV 826
Query: 779 NEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRK 815
EM++++ H+ +++ PWNCPHGRPTMRHLV+L IR+
Sbjct: 827 REMERLIRHMGEIDQPWNCPHGRPTMRHLVNLAMIRQ 863
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 112/202 (55%), Gaps = 29/202 (14%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFG-------MNI 132
R + QAY L++ GVR +CTN T K KSV++ TQGSS + DN+ +FG M +
Sbjct: 188 RMCQILQAYCLVSVGVRIICTNHTAKGGKSVIMSTQGSSRVLDNVTALFGTKQTAELMQL 247
Query: 133 YNCL---------------EPVAICKSD-------SCKVEGFLSKPGQGSGRNLGDRQYF 170
C+ + +A+ + + K+EG++S GSGR+ DRQ++
Sbjct: 248 VPCIGGNGKIQDLEASDFDDSMALTQEEVDNFNLSRYKIEGYISSCAHGSGRSTKDRQFY 307
Query: 171 FVNDRPVDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECS 230
F+N RP + ++SKL+N+ Y N Q P +N ++ DVN+TPDKR+V ++E
Sbjct: 308 FINSRPCEPKQISKLINDAYHRYNVHQQPFVFLNLMLDRSEVDVNLTPDKRQVLVNNEKI 367
Query: 231 ILHALREGLQEIYSPNNASYSV 252
++ A+R+ +++ + +S+++
Sbjct: 368 LMLAIRKSIKKTFQTVPSSFTM 389
Score = 82.8 bits (203), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/82 (54%), Positives = 56/82 (68%), Gaps = 6/82 (7%)
Query: 2 DVETP----TN--SPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIAL 55
++ETP TN S I I+K VHRIC+GQV+ +L+ AVKELVENSLDAGAT IE+ L
Sbjct: 4 ELETPMLPATNAESSKINAIDKETVHRICSGQVVLNLAIAVKELVENSLDAGATLIEVKL 63
Query: 56 KEYGEEWFQVVDNGCGISPNNF 77
+ G E +V DNG G+ NF
Sbjct: 64 RGCGAELVEVSDNGSGVEEKNF 85
>gi|157787060|ref|NP_001099378.1| mismatch repair endonuclease PMS2 [Rattus norvegicus]
gi|149034928|gb|EDL89648.1| postmeiotic segregation increased 2 (S. cerevisiae) (predicted),
isoform CRA_a [Rattus norvegicus]
gi|149034929|gb|EDL89649.1| postmeiotic segregation increased 2 (S. cerevisiae) (predicted),
isoform CRA_a [Rattus norvegicus]
Length = 542
Score = 219 bits (558), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 115/238 (48%), Positives = 149/238 (62%), Gaps = 21/238 (8%)
Query: 586 SQPENEERKARAL------AAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIV 639
S+ E+ RK RA AA EL R RK F M+++GQFNLGFI+ KL +DLF+V
Sbjct: 319 SKSEHNYRKFRAKICPGENQAAEDELRREIRKSMFAEMEILGQFNLGFIVTKLKEDLFLV 378
Query: 640 DQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPH 699
DQHAADEKYNFE L Q TVL Q L+ P L+LT E V +++I RKNGF D
Sbjct: 379 DQHAADEKYNFEMLQQHTVLQAQRLITPQTLNLTAVNEAVLIENLEIFRKNGFDFIIDED 438
Query: 700 ALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVC-PSRVR 758
A R +L ++P SK TFG +D+ +LI L+D+ G +C PSRVR
Sbjct: 439 APVTERAKLISLPTSKNWTFGPQDIDELIFMLSDSPG--------------VMCRPSRVR 484
Query: 759 AMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKN 816
M ASRACR S+MIG AL +EM+K++ H+ +++ PWNCPHGRPTMRH+ +L I +N
Sbjct: 485 QMFASRACRKSVMIGTALSASEMKKLISHMGEMDHPWNCPHGRPTMRHIANLDVISQN 542
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%)
Query: 194 NSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASYSVN 253
N QYP ++N V + D+NVTPDKR++ +E +L L+ L ++ + SVN
Sbjct: 3 NRHQYPFVVLNVSVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLMGMFDSDANKLSVN 62
Query: 254 K 254
+
Sbjct: 63 Q 63
>gi|156355115|ref|XP_001623519.1| predicted protein [Nematostella vectensis]
gi|156210229|gb|EDO31419.1| predicted protein [Nematostella vectensis]
Length = 786
Score = 219 bits (558), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 119/271 (43%), Positives = 161/271 (59%), Gaps = 33/271 (12%)
Query: 544 LQFSIQDLRKRRQQRLSIMQSSCHTSGSVKMRRCFAAATLELSQPENEERKARALAAATT 603
++FS++ LR R + +S + V++ R + PEN +AA
Sbjct: 543 VEFSMEKLRSRSHS----LNTSITQNAEVRIFRAKIS-------PENN-------SAAEE 584
Query: 604 ELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQP 663
EL + K F RM+++GQFNLGFI+ KLD DLFI+DQHA+DEKYNFE ++TVL Q
Sbjct: 585 ELTKNIEKGSFARMEIVGQFNLGFILAKLDNDLFIIDQHASDEKYNFEMQQRNTVLRNQR 644
Query: 664 LLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVED 723
L+ P KL+LT E + +++I RKNGF + D A A + +L +VP SK TFGVED
Sbjct: 645 LIIPRKLELTAVNESILLDNLEIFRKNGFEFQIDDDAPATQKVKLVSVPTSKNWTFGVED 704
Query: 724 VKDLISTLADNQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGRNEMQ 782
V++LI L+D G +C P+RVR M ASRACR SIM+G AL MQ
Sbjct: 705 VEELIFMLSDAPG--------------ILCRPTRVRKMFASRACRMSIMVGTALSHAHMQ 750
Query: 783 KILEHLADLNSPWNCPHGRPTMRHLVDLTTI 813
I+ H+ + PWNCPHGRPTMRH+V+L +
Sbjct: 751 GIVGHMGQMEHPWNCPHGRPTMRHVVNLAML 781
Score = 144 bits (363), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/195 (39%), Positives = 109/195 (55%), Gaps = 21/195 (10%)
Query: 79 VRAVFLCQAYALIAKGVRFVCTN-TTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLE 137
V+ V + Q Y LI+ G R C+N GK +S V+ T GS +KDNI VFG L
Sbjct: 183 VKLVHVLQGYCLISAGTRITCSNHVAGK--RSTVVSTHGSLQIKDNITAVFGPKQVQSLL 240
Query: 138 P------------------VAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDL 179
P V+ +S+ + GF+SK GSGR+ DRQ+FF+N RP DL
Sbjct: 241 PFKQLQPSEEDCTELNLSVVSNSESNPFTITGFISKADHGSGRSSSDRQFFFINKRPCDL 300
Query: 180 PKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGL 239
PKVS++V+E+Y N Q+P +++ + A DVNVTPDKR+VF E +L LR L
Sbjct: 301 PKVSRVVSEVYHMYNRHQFPFVMLDISLKRDAVDVNVTPDKRQVFLQQEKLLLATLRTSL 360
Query: 240 QEIYSPNNASYSVNK 254
+++ P ++Y VN+
Sbjct: 361 IKMFDPGTSTYEVNQ 375
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 56/70 (80%)
Query: 9 SPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDN 68
+P++ PI++ VH+IC+GQV+ L++A+KEL+ENSLDAGATS+++ LKE+G +V DN
Sbjct: 13 APSVLPIDRKSVHQICSGQVVLSLATAMKELLENSLDAGATSVDVRLKEHGSHSIEVSDN 72
Query: 69 GCGISPNNFK 78
G G+ P NF+
Sbjct: 73 GAGVEPQNFE 82
>gi|312385621|gb|EFR30068.1| hypothetical protein AND_00556 [Anopheles darlingi]
Length = 878
Score = 219 bits (557), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 109/217 (50%), Positives = 137/217 (63%), Gaps = 15/217 (6%)
Query: 600 AATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVL 659
AA EL+ K DF MK++GQFNLGFI+ +L DLFIVDQHA DEKYNFE L ++TVL
Sbjct: 669 AAENELQTEITKADFAAMKIVGQFNLGFIVCRLGDDLFIVDQHATDEKYNFEDLQRTTVL 728
Query: 660 NQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITF 719
Q L+ P L+LT E+V ++D+ NGF E D A + RL A PFS+ F
Sbjct: 729 QNQRLVVPQPLELTAVNEMVLIDNLDVFEMNGFKFEIDGAAATTRKVRLIAKPFSRNWEF 788
Query: 720 GVEDVKDLISTLADNQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGR 778
G ED+ +LI L D G +VC PSRVRAM ASRACR S+MIG AL
Sbjct: 789 GKEDIDELIFMLQDAPG--------------TVCRPSRVRAMFASRACRKSVMIGTALSV 834
Query: 779 NEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRK 815
EM++++ H+ ++ PWNCPHGRPTMRHLV+L I +
Sbjct: 835 REMERLVRHMGEIEQPWNCPHGRPTMRHLVNLAMINR 871
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 106/206 (51%), Gaps = 29/206 (14%)
Query: 79 VRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFG--------- 129
+R + QAY L++ GVR +CTN + K KSV++ T GS + DN+ +FG
Sbjct: 179 LRMCQILQAYCLVSVGVRIICTNQSAKGAKSVIMSTPGSQRVLDNVTALFGPRQTADLLE 238
Query: 130 -------------MNIYNCLEPVAICKSD-------SCKVEGFLSKPGQGSGRNLGDRQY 169
++ + E +A+ + + +EG++S G+GR+ DRQ+
Sbjct: 239 LKPAIGSNGKIQDLDESDFDESLALTQEEVDNFNLSQYTIEGYISSCAHGAGRSSKDRQF 298
Query: 170 FFVNDRPVDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDEC 229
+FVN RP + ++SKL+N+ Y N Q P +N + DVN+TPDKR V + E
Sbjct: 299 YFVNSRPCEPRQISKLINDAYHRYNVHQQPFVYLNLKLDRSEVDVNLTPDKRMVLMNKEK 358
Query: 230 SILHALREGLQEIYSPNNASYSVNKV 255
I+ A+R+ +++ + +S+ V +
Sbjct: 359 IIMLAVRKSIKKTFGNVPSSFKVQNL 384
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 40/56 (71%)
Query: 23 ICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFK 78
+ V+ +L+ AVKELVENSLDAGAT +E+ L+E+G E +V DNG G+ NF+
Sbjct: 23 VAGDTVVLNLAIAVKELVENSLDAGATLVEVKLREHGSELVEVADNGSGVEEKNFE 78
>gi|326436264|gb|EGD81834.1| Pms2 protein [Salpingoeca sp. ATCC 50818]
Length = 934
Score = 219 bits (557), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 109/217 (50%), Positives = 136/217 (62%), Gaps = 15/217 (6%)
Query: 601 ATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLN 660
A EL K+DF M+VIGQFNLGFII +L LFIVDQHA+DEKYNFERL Q T +
Sbjct: 719 AEKELSTQISKDDFSDMQVIGQFNLGFIIARLHHHLFIVDQHASDEKYNFERLQQVTKIK 778
Query: 661 QQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFG 720
+Q L+RP LDL +E + ++ I ++NGF D HA G R RL +P SK FG
Sbjct: 779 RQVLIRPRPLDLPAVDENLLLDNLHIFQQNGFEFAVDEHAAPGKRVRLSQIPHSKGTEFG 838
Query: 721 VEDVKDLISTLADNQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGRN 779
++D+ +L+ L D G C PSR+R M ASRACRSSIMIG AL R
Sbjct: 839 IDDIHELLFMLRDQPG--------------VFCRPSRIRGMFASRACRSSIMIGKALTRP 884
Query: 780 EMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKN 816
EM+ IL+H+ + PWNCPHGRPTMRHL D+++ N
Sbjct: 885 EMRAILQHMGTMEQPWNCPHGRPTMRHLCDISSSTSN 921
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 90/166 (54%), Gaps = 14/166 (8%)
Query: 79 VRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGS-SSLKDNIITVFGMNIYNCLE 137
+ V + Q Y ++ V+F T+ G + + +VLKT+G +S+ D +FG
Sbjct: 169 AKLVSMLQGYCMVRPDVQFSLTHIQGNSARRLVLKTRGGDASVLDVATALFGSKTVQF-- 226
Query: 138 PVAICKS-----------DSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLV 186
+ + K+ KV G++SKP Q GR+ DRQ+FF+N RP + K+S+ V
Sbjct: 227 AIVLTKTLTEIKTVDGPLPGLKVSGYVSKPMQTLGRSSPDRQFFFINQRPCEFAKLSRAV 286
Query: 187 NELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSIL 232
NE Y+ N QYP + + +P + DVNVTPDKR +FF E ++L
Sbjct: 287 NEAYRAYNKNQYPFVVAHLHMPQQEVDVNVTPDKRTLFFHKEQALL 332
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 48/66 (72%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR I + VHRIC+GQV+ LS A+KE+VEN LDAGA +I I K+YG ++ +V D+G G
Sbjct: 2 IRQIRREDVHRICSGQVVLSLSVALKEIVENGLDAGAKTITIKAKDYGLDYIEVADDGSG 61
Query: 72 ISPNNF 77
I +NF
Sbjct: 62 IEDSNF 67
>gi|17863002|gb|AAL39978.1| SD07911p [Drosophila melanogaster]
Length = 895
Score = 218 bits (556), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 113/224 (50%), Positives = 142/224 (63%), Gaps = 16/224 (7%)
Query: 599 AAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTV 658
+A EL+R KEDF RM++IGQFNLGFII KL+ DLFIVDQHA DEKYNFE L ++T
Sbjct: 679 TSAEAELQREIDKEDFARMEIIGQFNLGFIIVKLEDDLFIVDQHATDEKYNFETLQRTTQ 738
Query: 659 LNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKIT 718
L Q L P L+LT E+V H+D+ KNGF E D A A + RL P SK+
Sbjct: 739 LEYQRLAVPQNLELTAVNEMVLLNHIDVFEKNGFKFEVDHEAPATKKVRLLGKPHSKRWE 798
Query: 719 FGVEDVKDLISTLADNQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALG 777
FG ED+ +LI L D ++C PSRVRAM ASRACR S+MIG AL
Sbjct: 799 FGKEDIDELIFMLQDA-------------PEGTICRPSRVRAMFASRACRKSVMIGTALS 845
Query: 778 RN-EMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKNIDEN 820
RN M++++ + ++ PWNCPHGRPTMRHL+++ + N DEN
Sbjct: 846 RNTTMKRLITQMGEIEQPWNCPHGRPTMRHLINIAML-INSDEN 888
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 90/182 (49%), Gaps = 37/182 (20%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV---- 139
+ QAY L+ KGVR +C+N T K K++VL+T G + NI +FG L P+
Sbjct: 199 ILQAYCLVTKGVRILCSNHTPKGAKTIVLQTHGDQEVMANISAIFGARQAADLVPLKSPF 258
Query: 140 -------AICKSD--------------------------SCKVEGFLSKPGQGSGRNLGD 166
A ++D ++EGF+S G+GR+ D
Sbjct: 259 GQGQLTEAELRADLESGADLADTTSPQISTEDVERLNQADFQLEGFISSCRHGAGRSSRD 318
Query: 167 RQYFFVNDRPVDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFS 226
RQ+FFVN RP D ++K++NE+Y N +Q P +N I DVN+TPDKR++ +
Sbjct: 319 RQFFFVNSRPCDPKNIAKVMNEVYHRYNVQQQPFIYLNIITARSDVDVNLTPDKRQLLIN 378
Query: 227 DE 228
+E
Sbjct: 379 NE 380
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 53/79 (67%), Gaps = 2/79 (2%)
Query: 2 DVETPTN--SPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYG 59
DV PT S I+ I K VH+IC+GQV+ L+ AVKELVENS+DAGAT +EI LK+ G
Sbjct: 15 DVPPPTTALSGQIKAIGKDTVHKICSGQVVLSLAVAVKELVENSIDAGATLVEIKLKDQG 74
Query: 60 EEWFQVVDNGCGISPNNFK 78
+ +V DNG G+ N +
Sbjct: 75 LQSVEVSDNGSGVEEMNLE 93
>gi|17136970|ref|NP_477023.1| Pms2 [Drosophila melanogaster]
gi|7303075|gb|AAF58142.1| Pms2 [Drosophila melanogaster]
Length = 899
Score = 218 bits (556), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 113/224 (50%), Positives = 142/224 (63%), Gaps = 16/224 (7%)
Query: 599 AAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTV 658
+A EL+R KEDF RM++IGQFNLGFII KL+ DLFIVDQHA DEKYNFE L ++T
Sbjct: 683 TSAEAELQREIDKEDFARMEIIGQFNLGFIIVKLEDDLFIVDQHATDEKYNFETLQRTTQ 742
Query: 659 LNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKIT 718
L Q L P L+LT E+V H+D+ KNGF E D A A + RL P SK+
Sbjct: 743 LEYQRLAVPQNLELTAVNEMVLLNHIDVFEKNGFKFEVDHEAPATKKVRLLGKPHSKRWE 802
Query: 719 FGVEDVKDLISTLADNQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALG 777
FG ED+ +LI L D ++C PSRVRAM ASRACR S+MIG AL
Sbjct: 803 FGKEDIDELIFMLQDA-------------PEGTICRPSRVRAMFASRACRKSVMIGTALS 849
Query: 778 RN-EMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKNIDEN 820
RN M++++ + ++ PWNCPHGRPTMRHL+++ + N DEN
Sbjct: 850 RNTTMRRLITQMGEIEQPWNCPHGRPTMRHLINIAML-INSDEN 892
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 90/182 (49%), Gaps = 37/182 (20%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV---- 139
+ QAY L+ KGVR +C+N T K K++VL+T G + NI +FG L P+
Sbjct: 199 ILQAYCLVTKGVRILCSNHTPKGAKTIVLQTHGDQEVMANISAIFGARQAADLVPLKSPF 258
Query: 140 -------AICKSD--------------------------SCKVEGFLSKPGQGSGRNLGD 166
A ++D ++EGF+S G+GR+ D
Sbjct: 259 GQGQLTEAELRADLESGADLADTTSPQISTEDVERLNQADFQLEGFISSCRHGAGRSSRD 318
Query: 167 RQYFFVNDRPVDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFS 226
RQ+FFVN RP D ++K++NE+Y N +Q P +N I DVN+TPDKR++ +
Sbjct: 319 RQFFFVNSRPCDPKNIAKVMNEVYHRYNVQQQPFIYLNIITARSDVDVNLTPDKRQLLIN 378
Query: 227 DE 228
+E
Sbjct: 379 NE 380
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 53/79 (67%), Gaps = 2/79 (2%)
Query: 2 DVETPTN--SPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYG 59
DV PT S I+ I K VH+IC+GQV+ L+ AVKELVENS+DAGAT +EI LK+ G
Sbjct: 15 DVPPPTTALSGQIKAIGKDTVHKICSGQVVLSLAVAVKELVENSIDAGATLVEIKLKDQG 74
Query: 60 EEWFQVVDNGCGISPNNFK 78
+ +V DNG G+ N +
Sbjct: 75 LQSVEVSDNGSGVEEMNLE 93
>gi|195334603|ref|XP_002033967.1| GM20141 [Drosophila sechellia]
gi|194125937|gb|EDW47980.1| GM20141 [Drosophila sechellia]
Length = 901
Score = 218 bits (556), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 110/216 (50%), Positives = 139/216 (64%), Gaps = 15/216 (6%)
Query: 600 AATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVL 659
+A EL+R KEDF RM++IGQFNLGFII KL+ DLFIVDQHA DEKYNFE L ++T L
Sbjct: 686 SAEAELQREIDKEDFARMEIIGQFNLGFIIVKLEDDLFIVDQHATDEKYNFETLQRTTQL 745
Query: 660 NQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITF 719
Q L P L+LT E+V H+D+ KNGF E D A A + RL P SK+ F
Sbjct: 746 EYQRLAVPQNLELTAVNEMVLLNHIDVFEKNGFKFEVDHEAPATKKVRLLGKPHSKRWEF 805
Query: 720 GVEDVKDLISTLADNQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGR 778
G ED+ +LI L D ++C PSRVRAM ASRACR S+MIG AL R
Sbjct: 806 GKEDIDELIFMLQDA-------------PEGTICRPSRVRAMFASRACRKSVMIGTALSR 852
Query: 779 N-EMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTI 813
N M++++ + ++ PWNCPHGRPTMRHL+++T +
Sbjct: 853 NTTMRRLITQMGEIEQPWNCPHGRPTMRHLINITML 888
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 89/182 (48%), Gaps = 37/182 (20%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGM------------- 130
+ QAY L+ KGVR +C+N T K K+VVL+T G + NI +FG
Sbjct: 199 ILQAYCLVTKGVRILCSNHTPKGAKTVVLQTHGDQEVMANISAIFGARQAADLVTLKSPF 258
Query: 131 --------NIYNCLEPVAICKSDSC----------------KVEGFLSKPGQGSGRNLGD 166
+ LE A +C +++GF+S G+GR+ D
Sbjct: 259 GQGQLTEAELRADLESGADVADTTCPQISTEDVERLNQADFQLDGFISSCRHGAGRSSRD 318
Query: 167 RQYFFVNDRPVDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFS 226
RQ+FFVN RP D ++K++NE+Y N +Q P +N I DVN+TPDKR++ +
Sbjct: 319 RQFFFVNSRPCDPKNIAKVINEIYHRYNVQQQPFIYLNIITARSDVDVNLTPDKRQLLIN 378
Query: 227 DE 228
+E
Sbjct: 379 NE 380
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 49/70 (70%)
Query: 9 SPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDN 68
S I+ I K VH+IC+GQV+ L+ AVKELVENS+DAGAT +EI LK+ G + +V DN
Sbjct: 24 SGQIKAIGKDTVHKICSGQVVLSLAVAVKELVENSIDAGATLVEIKLKDQGLQGVEVSDN 83
Query: 69 GCGISPNNFK 78
G G+ N +
Sbjct: 84 GSGVEEMNLE 93
>gi|393245221|gb|EJD52732.1| hypothetical protein AURDEDRAFT_55752, partial [Auricularia
delicata TFB-10046 SS5]
Length = 225
Score = 218 bits (554), Expect = 1e-53, Method: Composition-based stats.
Identities = 110/214 (51%), Positives = 140/214 (65%), Gaps = 15/214 (7%)
Query: 600 AATTELERLFRKEDFGRMKVIGQFNLGFIIGKL---DQDLFIVDQHAADEKYNFERLSQS 656
AA +L R+ K DF RM+++GQFNLGFII +L D DLFI+DQHA+DEKYNFE L Q+
Sbjct: 2 AAEAKLSRIIHKADFARMEIVGQFNLGFIIARLRDRDDDLFIIDQHASDEKYNFETLQQT 61
Query: 657 TVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKK 716
T + Q LLRP L+LT +E++A +DI+RKNGF L D A A R RL AVP SK
Sbjct: 62 TKMETQRLLRPRPLELTAADELLAMERIDILRKNGFDLTVDEDAPAHQRVRLTAVPVSKN 121
Query: 717 ITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDAL 776
F V+D+++LI TL D + S+VRAM A RACR S+MIGDAL
Sbjct: 122 TAFDVQDLEELIHTLRDTA------------PGQTARCSKVRAMFAMRACRKSVMIGDAL 169
Query: 777 GRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
+M++I+ H+ ++ PWNCPHGRPTMRHL L
Sbjct: 170 NMRQMKEIVLHMGTMDQPWNCPHGRPTMRHLTSL 203
>gi|62739886|gb|AAH93921.1| PMS2 postmeiotic segregation increased 2 (S. cerevisiae) [Homo
sapiens]
Length = 862
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 134/319 (42%), Positives = 183/319 (57%), Gaps = 43/319 (13%)
Query: 501 IVSSSNDLKK--NSEDLSVAASHLQFSGSILDAPVPSSSLDICSTLQFSIQDLRKRRQQR 558
I+SSS+ +K N++D+S AS + + I VP L FSI L KR +Q
Sbjct: 584 ILSSSDICQKLVNTQDMS--ASQVDVAVKINKKVVP---------LDFSISSLAKRIKQ- 631
Query: 559 LSIMQSSCHTSGSVKMRRCFAAATLELSQPENEERKARALAAATTELERLFRKEDFGRMK 618
+ + + G R+ A ++ EN+ AA EL + K F M+
Sbjct: 632 --LHHEAQQSEGEQNYRKFRA----KICPGENQ--------AAEDELRKEISKTMFAEME 677
Query: 619 VIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEV 678
+IGQFNLGFII KL++D+FIVDQHA DEKYNFE L Q TVL Q L+ P L+LT E
Sbjct: 678 IIGQFNLGFIITKLNEDIFIVDQHATDEKYNFEMLQQHTVLQGQRLIAPQTLNLTAVNEA 737
Query: 679 VASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGEC 738
V +++I RKNGF D +A R +L ++P SK TFG +DV +LI L+D+ G
Sbjct: 738 VLIENLEIFRKNGFDFVIDENAPVTERAKLISLPTSKNWTFGPQDVDELIFMLSDSPG-- 795
Query: 739 SIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNC 797
+C PSRV+ M ASRACR S+MIG AL +EM+K++ H+ +++ PWNC
Sbjct: 796 ------------VMCRPSRVKQMFASRACRKSVMIGTALNTSEMKKLITHMGEMDHPWNC 843
Query: 798 PHGRPTMRHLVDLTTIRKN 816
PHGRPTMRH+ +L I +N
Sbjct: 844 PHGRPTMRHIANLGVISQN 862
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/181 (37%), Positives = 100/181 (55%), Gaps = 17/181 (9%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP- 138
+ V + AY +I+ G+R CTN G+ + V+ T GS S+K+NI +VFG L P
Sbjct: 183 KMVQVLHAYCIISAGIRVSCTNQLGQGKRQPVVCTGGSPSIKENIGSVFGQKQLQSLIPF 242
Query: 139 VAICKSDS-CK---------------VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKV 182
V + SDS C+ + GF+S+ G GR+ DRQ+FF+N RP D KV
Sbjct: 243 VQLPPSDSVCEEYGLSCSDALHNLFYISGFISQCTHGVGRSSTDRQFFFINRRPCDPAKV 302
Query: 183 SKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEI 242
+LVNE+Y N QYP ++N V + D+NVTPDKR++ +E +L L+ L +
Sbjct: 303 CRLVNEVYHMYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLIGM 362
Query: 243 Y 243
+
Sbjct: 363 F 363
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 55/67 (82%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+PI++ VH+IC+GQV+ LS+AVKELVENSLDAGAT+I++ LK+YG + +V DNGCG
Sbjct: 15 IKPIDRKSVHQICSGQVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSDNGCG 74
Query: 72 ISPNNFK 78
+ NF+
Sbjct: 75 VEEENFE 81
>gi|357606259|gb|EHJ64985.1| putative DNA mismatch repair protein pms2 [Danaus plexippus]
Length = 820
Score = 218 bits (554), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 102/211 (48%), Positives = 139/211 (65%), Gaps = 15/211 (7%)
Query: 604 ELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQP 663
EL R K+ F +MK+IGQFNLGFII +LD DLFI+DQHA DE YNFE L ++T L Q
Sbjct: 620 ELSREIEKQSFKKMKIIGQFNLGFIITRLDDDLFIIDQHATDEIYNFETLQKTTELTSQK 679
Query: 664 LLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVED 723
L+ P +L+LT E + ++DI +KNGF+ D A R +L +P SK FG ED
Sbjct: 680 LVIPQQLELTGVNEQILMDNLDIFKKNGFTFAIDETAAPTKRVKLLTLPMSKNWIFGKED 739
Query: 724 VKDLISTLADNQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGRNEMQ 782
+++L+ L +N E C PSRVRAM ASRACR S+MIG AL + +M+
Sbjct: 740 IEELLFILKENHSE--------------YCRPSRVRAMFASRACRKSVMIGTALSKGDMR 785
Query: 783 KILEHLADLNSPWNCPHGRPTMRHLVDLTTI 813
K+++H+A+++ PWNCPHGRPT+RHL++L +
Sbjct: 786 KLVDHMAEIDKPWNCPHGRPTIRHLINLAMV 816
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/301 (29%), Positives = 131/301 (43%), Gaps = 75/301 (24%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGM------------- 130
L AY LI+KGV+ C+N T N KS+V+ TQGS+S KDNI +VFG+
Sbjct: 186 LLYAYCLISKGVKITCSNQTNSNSKSLVVATQGSNSYKDNIASVFGVKQLQSILDVKTEL 245
Query: 131 ------NIYNCLEPVAICKSDSCKVE---------------------------------- 150
NI+ L A +S +E
Sbjct: 246 VSNIKDNIFRGLSGEAKVNEESINIEDIEIDLSEDSNDAQTDENNSSQIPLPQRSQGYKN 305
Query: 151 --------GFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQYPIAI 202
G++S GSGR+ DRQ+F++N RP + K+ KL+NE+Y+ N QYP
Sbjct: 306 IPNPVELTGYISSCAHGSGRSSTDRQFFYINSRPCEPVKIIKLINEIYRQYNPHQYPFVF 365
Query: 203 MNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYS--PNNASYSVNKVEQLI- 259
+N + + DVNVTPDKRKVF + E +IL ++ L +++ P + + +
Sbjct: 366 LNVNIERTSVDVNVTPDKRKVFLTKEKAILDVVKCSLLKMFEDIPRSVKVEAPSIVAAVK 425
Query: 260 -EPEKSGPSSGAESCMFLEQLSPDGNGCIEILNEQQISKGNTPKTVEVDTLHSDALEGLV 318
EPE S P FL+Q S + + S+ N P E+ S L+ +
Sbjct: 426 TEPELSQPRIFQS---FLKQFSNKSSSI-------KPSESNNPDKCELKRKSSSVLDNFI 475
Query: 319 H 319
Sbjct: 476 Q 476
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/68 (61%), Positives = 54/68 (79%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
TI+PINK VH+IC+ QV+ L+ AVKELVENSLDAGAT+IE+ LK YG E +V DNG
Sbjct: 13 TIKPINKDAVHKICSDQVVLSLAVAVKELVENSLDAGATNIEVRLKNYGTELIEVSDNGS 72
Query: 71 GISPNNFK 78
G++ +NF+
Sbjct: 73 GVTEDNFE 80
>gi|301604746|ref|XP_002932025.1| PREDICTED: mismatch repair endonuclease PMS2-like [Xenopus
(Silurana) tropicalis]
Length = 848
Score = 217 bits (553), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 109/218 (50%), Positives = 141/218 (64%), Gaps = 15/218 (6%)
Query: 600 AATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVL 659
AA EL + KE F +M++IGQFNLGFII KLD DLF++DQHA DEKYNFE L Q TVL
Sbjct: 645 AAEDELRKEISKEMFAKMEIIGQFNLGFIITKLDSDLFMIDQHATDEKYNFEMLQQETVL 704
Query: 660 NQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITF 719
Q L+ P KL LT E V ++DI +KNGF D A R +L ++P SK TF
Sbjct: 705 QGQRLIAPQKLHLTAVNETVLIDNLDIFKKNGFDFIFDEEAPITERVKLISLPTSKNWTF 764
Query: 720 GVEDVKDLISTLADNQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGR 778
G +D+++LI L+D+ G +C PSRVR M ASRACR S+MIG AL
Sbjct: 765 GQQDIEELIFMLSDSPG--------------VMCRPSRVRQMFASRACRKSVMIGTALNV 810
Query: 779 NEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKN 816
+EM+K++ H+ ++ PWNCPHGRPTMRH+ +L I ++
Sbjct: 811 HEMKKLVTHMGEIEHPWNCPHGRPTMRHIANLDMISQD 848
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 61/163 (37%), Positives = 90/163 (55%), Gaps = 18/163 (11%)
Query: 79 VRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSS-LKDNIITVFGMNIYNCLE 137
+ V + QAY +I+ GVR CTN G+ ++ V+ + GS+S +K+NI VFG L
Sbjct: 180 TKMVQVLQAYCIISTGVRITCTNQVGQGKRNPVVCSSGSTSDVKENIGAVFGQKQLQSLI 239
Query: 138 PV-------AICKSDSC----------KVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLP 180
P +C+ + G++S+ G GR+ DRQ+FF+N RP D
Sbjct: 240 PFVQLPPSETVCEEYGLIHEDTPHGFYNISGYISRCDHGVGRSSTDRQFFFINQRPCDPA 299
Query: 181 KVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKV 223
KVSK+VNE+Y N QYP ++N V + D+NVTPDKR++
Sbjct: 300 KVSKIVNEVYHLYNRHQYPFVVLNICVSSECVDINVTPDKRQI 342
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/78 (57%), Positives = 61/78 (78%), Gaps = 6/78 (7%)
Query: 7 TNSPT------IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGE 60
T+SP+ I+PI++ VH+IC+GQV+ L++AVKEL+ENS+DAGATSI+I LKEYG
Sbjct: 2 TDSPSSELAKAIKPIDRKSVHQICSGQVVLSLATAVKELLENSIDAGATSIDIKLKEYGA 61
Query: 61 EWFQVVDNGCGISPNNFK 78
E +V DNGCG+ NNF+
Sbjct: 62 ESIEVSDNGCGVEENNFE 79
>gi|348502122|ref|XP_003438618.1| PREDICTED: mismatch repair endonuclease PMS2 [Oreochromis
niloticus]
Length = 853
Score = 217 bits (552), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 142/363 (39%), Positives = 197/363 (54%), Gaps = 36/363 (9%)
Query: 460 KADKVSKEIENILSSEGNTNEKPREELVTQEKATPL----LNVPSIVSSSNDLKKNSEDL 515
K D S E + GN++ P + + E TP ++ + + +D SE+
Sbjct: 521 KVDSTSVNNETFKETSGNSHAVPEDPELETEACTPYEDSAVSPEAKRARKDDAHFPSEEE 580
Query: 516 SVAASHL-QFSGSILDAPVPSSSLDICSTLQFSIQDLRKRRQQRLSIMQSSCHTSGSVKM 574
S S+ + S +DAPV + LQFS+ +L K+ +RL Q +G +
Sbjct: 581 SSTFSNAGEKQSSTVDAPVSLQRRTV--HLQFSLAELGKK-MRRLQDQQK--QRAGEELL 635
Query: 575 RRCFAAATLELSQPENEERKARALAAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQ 634
R F A +++ EN +A EL++ KE F M++IGQFNLGFII KL
Sbjct: 636 YRRFRA---KINPGENH--------SAEEELKKEISKEMFKEMEIIGQFNLGFIITKLKS 684
Query: 635 DLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSL 694
DLF++DQHA DEKYNFE L Q T+L Q L+ P KL LT E V +++I R NGF
Sbjct: 685 DLFMIDQHATDEKYNFEMLQQHTILQGQKLIVPQKLHLTAVSENVLIENIEIFRNNGFEF 744
Query: 695 EEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVC- 753
D A R +L ++P SK TFG D+++LI L+D+ G +C
Sbjct: 745 LIDEDAQVMERVKLVSLPTSKNWTFGPSDIEELIFMLSDSPG--------------VMCR 790
Query: 754 PSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTI 813
PSRVR M ASRACR S+MIG AL NEM+K++ H+ ++ PWNCPHGRPTMRHL +L I
Sbjct: 791 PSRVRQMFASRACRKSVMIGTALNVNEMKKLVVHMGEIEHPWNCPHGRPTMRHLANLDVI 850
Query: 814 RKN 816
++
Sbjct: 851 SQD 853
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 104/192 (54%), Gaps = 17/192 (8%)
Query: 79 VRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMN------- 131
+ + + Q+Y +I+ GVR C+N G+ +S VL T GS S++DNI +FG
Sbjct: 179 AKMIHVLQSYCIISTGVRITCSNQNGQGKRSTVLSTSGSQSMRDNIGAIFGPKQLQSLLP 238
Query: 132 ------IYNCLEPVAICKSDSCK----VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPK 181
N +E + +D K + GF+S+ G GR+ DRQ++F+N+RP D K
Sbjct: 239 FQQVSPTENVIEEYGLKDADLPKQLFSITGFVSQGDHGVGRSTTDRQFYFINNRPCDPLK 298
Query: 182 VSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQE 241
V+KLVNE+Y N QYP +N V + DVNVTPDKR++F +E +L L+ L
Sbjct: 299 VTKLVNEVYHMYNRHQYPFVALNIAVASECVDVNVTPDKRQIFLQEEKLLLAILKTSLIA 358
Query: 242 IYSPNNASYSVN 253
+Y S+N
Sbjct: 359 MYEGGVNKISLN 370
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 52/67 (77%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR I+K VH+IC+GQV+ L++AVKELVENS+DAGAT+I++ LKE G E +V DNG G
Sbjct: 12 IRAIDKHSVHQICSGQVVLTLATAVKELVENSIDAGATNIDVKLKESGAEQVEVADNGKG 71
Query: 72 ISPNNFK 78
+ NF+
Sbjct: 72 VEEANFE 78
>gi|428182631|gb|EKX51491.1| Pms1 mismatch repair mutL [Guillardia theta CCMP2712]
Length = 629
Score = 217 bits (552), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 102/214 (47%), Positives = 137/214 (64%), Gaps = 13/214 (6%)
Query: 600 AATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVL 659
A T ER+ K DF RMK++GQFNLGFII +LD DLFI+DQHA DEKY FE L Q+T L
Sbjct: 413 AVTNLHERVISKSDFTRMKILGQFNLGFIIARLDSDLFILDQHACDEKYRFELLEQTTSL 472
Query: 660 NQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITF 719
QPL+ P +L+L +E++ ++D+ R NGF L+ D A R +L ++PFSK F
Sbjct: 473 KSQPLVVPKELELEAADEMLVQENLDVFRANGFELKIDEEAPPTKRVKLTSIPFSKSTVF 532
Query: 720 GVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRN 779
G DV +++ + ++ G PSRVRAMLASRAC S++ IG L R
Sbjct: 533 GPADVHEMLCLMREDSGSAQR-------------PSRVRAMLASRACHSAVTIGKHLTRQ 579
Query: 780 EMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTI 813
+M+ I++H++ + PWNCPHGRPTMRHL DL +
Sbjct: 580 QMRVIVDHMSSMEQPWNCPHGRPTMRHLFDLAEV 613
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 110/192 (57%), Gaps = 11/192 (5%)
Query: 86 QAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSD 145
QAYA+I VR C N T K K+ V T G++S+ D + +++G + L + + + +
Sbjct: 181 QAYAIIHSDVRITCVNQTPKG-KASVFSTPGNNSMLDCVTSIYGAKQKDSLTAIEL-RGE 238
Query: 146 SCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQYPIAIMNF 205
G++SK G G + GDRQ+ ++N RPVD+PK+SK +NE+YK N QYPI +N
Sbjct: 239 HVTCSGYISKASSGCGLSSGDRQFLYLNKRPVDIPKLSKAINEVYKMYNMHQYPIYFLNI 298
Query: 206 IVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSP--NNASYSVNKVEQLI---- 259
+ T DVNVTPDKR++ F DE ++ ++E L+ ++ P NN VE L
Sbjct: 299 QLSTDTYDVNVTPDKRQIMFHDESRLIEFVKENLRNLFEPSRNNIPSPTASVELLHPRNG 358
Query: 260 ---EPEKSGPSS 268
+PE +G ++
Sbjct: 359 HVDQPEPTGETT 370
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/73 (56%), Positives = 56/73 (76%)
Query: 9 SPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDN 68
S I+ I+ VHRIC+GQVI D SSA+KE+VEN++DAGAT +++ LK+YG E +V DN
Sbjct: 3 SKNIKAIDASSVHRICSGQVILDPSSALKEVVENAVDAGATKVDVKLKDYGLEVIEVCDN 62
Query: 69 GCGISPNNFKVRA 81
G GISP +F++ A
Sbjct: 63 GSGISPGDFELLA 75
>gi|557470|gb|AAA50390.1| similar to S. cerevisiae PMS1 Swiss-Prot Accession Number P14242,
S. cerevisiae MLH1 GenBank Accession Number U07187, E.
coli MUTL Swiss-Prot Accession Number P23367, Salmonella
typhimurium MUTL Swiss-Prot Accession Number P14161,
Streptococcus pneumoniae Swiss-Prot Accession Number
P14160 [Homo sapiens]
gi|189065468|dbj|BAG35307.1| unnamed protein product [Homo sapiens]
gi|306921511|dbj|BAJ17835.1| PMS2 postmeiotic segregation increased 2 [synthetic construct]
Length = 862
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 133/319 (41%), Positives = 183/319 (57%), Gaps = 43/319 (13%)
Query: 501 IVSSSNDLKK--NSEDLSVAASHLQFSGSILDAPVPSSSLDICSTLQFSIQDLRKRRQQR 558
I+SSS+ +K N++D+S AS + + I VP L FS+ L KR +Q
Sbjct: 584 ILSSSDICQKLVNTQDMS--ASQVDVAVKINKKVVP---------LDFSMSSLAKRIKQ- 631
Query: 559 LSIMQSSCHTSGSVKMRRCFAAATLELSQPENEERKARALAAATTELERLFRKEDFGRMK 618
+ + + G R+ A ++ EN+ AA EL + K F M+
Sbjct: 632 --LHHEAQQSEGEQNYRKFRA----KICPGENQ--------AAEDELRKEISKTMFAEME 677
Query: 619 VIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEV 678
+IGQFNLGFII KL++D+FIVDQHA DEKYNFE L Q TVL Q L+ P L+LT E
Sbjct: 678 IIGQFNLGFIITKLNEDIFIVDQHATDEKYNFEMLQQHTVLQGQRLIAPQTLNLTAVNEA 737
Query: 679 VASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGEC 738
V +++I RKNGF D +A R +L ++P SK TFG +DV +LI L+D+ G
Sbjct: 738 VLIENLEIFRKNGFDFVIDENAPVTERAKLISLPTSKNWTFGPQDVDELIFMLSDSPG-- 795
Query: 739 SIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNC 797
+C PSRV+ M ASRACR S+MIG AL +EM+K++ H+ +++ PWNC
Sbjct: 796 ------------VMCRPSRVKQMFASRACRKSVMIGTALNTSEMKKLITHMGEMDHPWNC 843
Query: 798 PHGRPTMRHLVDLTTIRKN 816
PHGRPTMRH+ +L I +N
Sbjct: 844 PHGRPTMRHIANLGVISQN 862
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/181 (37%), Positives = 100/181 (55%), Gaps = 17/181 (9%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP- 138
+ V + AY +I+ G+R CTN G+ + V+ T GS S+K+NI +VFG L P
Sbjct: 183 KMVQVLHAYCIISAGIRVSCTNQLGQGKRQPVVCTGGSPSIKENIGSVFGQKQLQSLIPF 242
Query: 139 VAICKSDS-CK---------------VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKV 182
V + SDS C+ + GF+S+ G GR+ DRQ+FF+N RP D KV
Sbjct: 243 VQLPPSDSVCEEYGLSCSDALHNLFYISGFISQCTHGVGRSSTDRQFFFINRRPCDPAKV 302
Query: 183 SKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEI 242
+LVNE+Y N QYP ++N V + D+NVTPDKR++ +E +L L+ L +
Sbjct: 303 CRLVNEVYHMYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLIGM 362
Query: 243 Y 243
+
Sbjct: 363 F 363
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 55/67 (82%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+PI++ VH+IC+GQV+ LS+AVKELVENSLDAGAT+I++ LK+YG + +V DNGCG
Sbjct: 15 IKPIDRKSVHQICSGQVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSDNGCG 74
Query: 72 ISPNNFK 78
+ NF+
Sbjct: 75 VEEENFE 81
>gi|4505913|ref|NP_000526.1| mismatch repair endonuclease PMS2 isoform a [Homo sapiens]
gi|535515|gb|AAA63923.1| homolog of yeast mutL gene [Homo sapiens]
gi|746341|prf||2017356B PMS2 gene
Length = 862
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 133/319 (41%), Positives = 183/319 (57%), Gaps = 43/319 (13%)
Query: 501 IVSSSNDLKK--NSEDLSVAASHLQFSGSILDAPVPSSSLDICSTLQFSIQDLRKRRQQR 558
I+SSS+ +K N++D+S AS + + I VP L FS+ L KR +Q
Sbjct: 584 ILSSSDICQKLVNTQDMS--ASQVDVAVKINKKVVP---------LDFSMSSLAKRIKQ- 631
Query: 559 LSIMQSSCHTSGSVKMRRCFAAATLELSQPENEERKARALAAATTELERLFRKEDFGRMK 618
+ + + G R+ A ++ EN+ AA EL + K F M+
Sbjct: 632 --LHHEAQQSEGEQNYRKFRA----KICPGENQ--------AAEDELRKEISKTMFAEME 677
Query: 619 VIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEV 678
+IGQFNLGFII KL++D+FIVDQHA DEKYNFE L Q TVL Q L+ P L+LT E
Sbjct: 678 IIGQFNLGFIITKLNEDIFIVDQHATDEKYNFEMLQQHTVLQGQRLIAPQTLNLTAVNEA 737
Query: 679 VASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGEC 738
V +++I RKNGF D +A R +L ++P SK TFG +DV +LI L+D+ G
Sbjct: 738 VLIENLEIFRKNGFDFVIDENAPVTERAKLISLPTSKNWTFGPQDVDELIFMLSDSPG-- 795
Query: 739 SIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNC 797
+C PSRV+ M ASRACR S+MIG AL +EM+K++ H+ +++ PWNC
Sbjct: 796 ------------VMCRPSRVKQMFASRACRKSVMIGTALNTSEMKKLITHMGEMDHPWNC 843
Query: 798 PHGRPTMRHLVDLTTIRKN 816
PHGRPTMRH+ +L I +N
Sbjct: 844 PHGRPTMRHIANLGVISQN 862
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/181 (37%), Positives = 100/181 (55%), Gaps = 17/181 (9%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP- 138
+ V + AY +I+ G+R CTN G+ + V+ T GS S+K+NI +VFG L P
Sbjct: 183 KMVQVLHAYCIISAGIRVSCTNQLGQGKRQPVVCTGGSPSIKENIGSVFGQKQLQSLIPF 242
Query: 139 VAICKSDS-CK---------------VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKV 182
V + SDS C+ + GF+S+ G GR+ DRQ+FF+N RP D KV
Sbjct: 243 VQLPPSDSVCEEYGLSCSDALHNLFYISGFISQCTHGVGRSSTDRQFFFINRRPCDPAKV 302
Query: 183 SKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEI 242
+LVNE+Y N QYP ++N V + D+NVTPDKR++ +E +L L+ L +
Sbjct: 303 CRLVNEVYHMYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLIGM 362
Query: 243 Y 243
+
Sbjct: 363 F 363
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 55/67 (82%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+PI++ VH+IC+GQV+ LS+AVKELVENSLDAGAT+I++ LK+YG + +V DNGCG
Sbjct: 15 IKPIDRKSVHQICSGQVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSDNGCG 74
Query: 72 ISPNNFK 78
+ NF+
Sbjct: 75 VEEENFE 81
>gi|74226946|dbj|BAE27115.1| unnamed protein product [Mus musculus]
Length = 859
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 119/274 (43%), Positives = 160/274 (58%), Gaps = 30/274 (10%)
Query: 544 LQFSIQDLRKRRQQRLSIMQSSCHTSGSVKMRRCFAAATLELSQPENEERKARALAAATT 603
L+FS+ L KR +Q + + H K R ++ EN+ AA
Sbjct: 615 LEFSLSSLAKRMKQLQHLKAQNKHELSYRKFR-------AKICPGENQ--------AAED 659
Query: 604 ELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQP 663
EL + K F M+++GQFNLGFI+ KL +DLF+VDQHAADEKYNFE L Q TVL Q
Sbjct: 660 ELRKEISKSMFAEMEILGQFNLGFIVTKLKEDLFLVDQHAADEKYNFEMLQQHTVLQAQR 719
Query: 664 LLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVED 723
L+ P L+LT E V +++I RKNGF D A R +L ++P SK TFG +D
Sbjct: 720 LITPQTLNLTAVNEAVLIENLEIFRKNGFDFVIDEDAPVTERAKLISLPTSKNWTFGPQD 779
Query: 724 VKDLISTLADNQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGRNEMQ 782
+ +LI L+D+ G +C PSRVR M ASRACR S+MIG AL +EM+
Sbjct: 780 IDELIFMLSDSPG--------------VMCRPSRVRQMFASRACRKSVMIGTALNASEMK 825
Query: 783 KILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKN 816
K++ H+ +++ PWNCPHGRPTMRH+ +L I +N
Sbjct: 826 KLITHMGEMDHPWNCPHGRPTMRHVANLDVISQN 859
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 103/192 (53%), Gaps = 17/192 (8%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
+ V + QAY +I+ GVR CTN G+ + + T SS +K+NI +VFG L P
Sbjct: 183 KMVQVLQAYCIISAGVRVSCTNQLGQGKRQPXVCTSASSGMKENIGSVFGQKQLQSLIPF 242
Query: 140 -------AICKSDSCK----------VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKV 182
A+C+ V GF+S+ G+GR+ DRQ+FF+N RP D KV
Sbjct: 243 VQLPPSDAVCEEYGLSTSRTPQNLFYVSGFISQCTHGAGRSATDRQFFFINQRPCDPAKV 302
Query: 183 SKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEI 242
SKLVNE+Y N QYP ++N V + D+NVTPDKR++ +E +L L+ L +
Sbjct: 303 SKLVNEVYHMYNRHQYPFVVLNVSVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLIGM 362
Query: 243 YSPNNASYSVNK 254
+ + +VN+
Sbjct: 363 FDSDANKLNVNQ 374
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 56/71 (78%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+PI+ VH+IC+GQV+ LS+AVKEL+ENS+DAGAT+I++ LK+YG + +V DNGCG
Sbjct: 15 IKPIDGKSVHQICSGQVVLSLSTAVKELIENSVDAGATTIDLRLKDYGVDLIEVSDNGCG 74
Query: 72 ISPNNFKVRAV 82
+ NF+ A+
Sbjct: 75 VEEENFEGLAL 85
>gi|317373266|sp|P54278.2|PMS2_HUMAN RecName: Full=Mismatch repair endonuclease PMS2; AltName: Full=DNA
mismatch repair protein PMS2; AltName: Full=PMS1 protein
homolog 2
gi|41350089|gb|AAS00390.1| unknown [Homo sapiens]
Length = 862
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 133/319 (41%), Positives = 183/319 (57%), Gaps = 43/319 (13%)
Query: 501 IVSSSNDLKK--NSEDLSVAASHLQFSGSILDAPVPSSSLDICSTLQFSIQDLRKRRQQR 558
I+SSS+ +K N++D+S AS + + I VP L FS+ L KR +Q
Sbjct: 584 ILSSSDICQKLVNTQDMS--ASQVDVAVKINKKVVP---------LDFSMSSLAKRIKQ- 631
Query: 559 LSIMQSSCHTSGSVKMRRCFAAATLELSQPENEERKARALAAATTELERLFRKEDFGRMK 618
+ + + G R+ A ++ EN+ AA EL + K F M+
Sbjct: 632 --LHHEAQQSEGEQNYRKFRA----KICPGENQ--------AAEDELRKEISKTMFAEME 677
Query: 619 VIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEV 678
+IGQFNLGFII KL++D+FIVDQHA DEKYNFE L Q TVL Q L+ P L+LT E
Sbjct: 678 IIGQFNLGFIITKLNEDIFIVDQHATDEKYNFEMLQQHTVLQGQRLIAPQTLNLTAVNEA 737
Query: 679 VASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGEC 738
V +++I RKNGF D +A R +L ++P SK TFG +DV +LI L+D+ G
Sbjct: 738 VLIENLEIFRKNGFDFVIDENAPVTERAKLISLPTSKNWTFGPQDVDELIFMLSDSPG-- 795
Query: 739 SIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNC 797
+C PSRV+ M ASRACR S+MIG AL +EM+K++ H+ +++ PWNC
Sbjct: 796 ------------VMCRPSRVKQMFASRACRKSVMIGTALNTSEMKKLITHMGEMDHPWNC 843
Query: 798 PHGRPTMRHLVDLTTIRKN 816
PHGRPTMRH+ +L I +N
Sbjct: 844 PHGRPTMRHIANLGVISQN 862
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/181 (37%), Positives = 100/181 (55%), Gaps = 17/181 (9%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP- 138
+ V + AY +I+ G+R CTN G+ + V+ T GS S+K+NI +VFG L P
Sbjct: 183 KMVQVLHAYCIISAGIRVSCTNQLGQGKRQPVVCTGGSPSIKENIGSVFGQKQLQSLIPF 242
Query: 139 VAICKSDS-CK---------------VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKV 182
V + SDS C+ + GF+S+ G GR+ DRQ+FF+N RP D KV
Sbjct: 243 VQLPPSDSVCEEYGLSCSDALHNLFYISGFISQCTHGVGRSSTDRQFFFINRRPCDPAKV 302
Query: 183 SKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEI 242
+LVNE+Y N QYP ++N V + D+NVTPDKR++ +E +L L+ L +
Sbjct: 303 CRLVNEVYHMYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLIGM 362
Query: 243 Y 243
+
Sbjct: 363 F 363
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 55/67 (82%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+PI++ VH+IC+GQV+ LS+AVKELVENSLDAGAT+I++ LK+YG + +V DNGCG
Sbjct: 15 IKPIDRKSVHQICSGQVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSDNGCG 74
Query: 72 ISPNNFK 78
+ NF+
Sbjct: 75 VEEENFE 81
>gi|410253450|gb|JAA14692.1| PMS2 postmeiotic segregation increased 2 [Pan troglodytes]
Length = 862
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 131/317 (41%), Positives = 179/317 (56%), Gaps = 39/317 (12%)
Query: 501 IVSSSNDLKKNSEDLSVAASHLQFSGSILDAPVPSSSLDICSTLQFSIQDLRKRRQQRLS 560
I+SSS+ +K V+AS + + I VP L FS+ L KR +Q
Sbjct: 584 ILSSSDICQKLVNTQDVSASQVDVAVKINKKVVP---------LDFSMSSLAKRIKQ--- 631
Query: 561 IMQSSCHTSGSVKMRRCFAAATLELSQPENEERKARALAAATTELERLFRKEDFGRMKVI 620
+ + + G R+ A ++ EN+ AA EL + K F M++I
Sbjct: 632 LHHEAQQSEGEQNYRKFRA----KICPGENQ--------AAEDELRKEISKTMFAEMEII 679
Query: 621 GQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVA 680
GQFNLGFII KL++D+FIVDQHA DEKYNFE L Q TVL Q L+ P L+LT E V
Sbjct: 680 GQFNLGFIITKLNEDIFIVDQHATDEKYNFEMLQQHTVLQGQRLIAPQTLNLTAVNEAVL 739
Query: 681 SMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSI 740
+++I RKNGF D +A R +L ++P SK TFG +DV +LI L+D+ G
Sbjct: 740 IENLEIFRKNGFDFVIDENAPVTERAKLISLPTSKNWTFGPQDVDELIFMLSDSPG---- 795
Query: 741 ISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPH 799
+C PSRV+ M ASRACR S+MIG AL +EM+K++ H+ +++ PWNCPH
Sbjct: 796 ----------VMCRPSRVKQMFASRACRKSVMIGTALNTSEMKKLITHMGEMDHPWNCPH 845
Query: 800 GRPTMRHLVDLTTIRKN 816
GRPTMRH+ +L I +N
Sbjct: 846 GRPTMRHIANLGVISQN 862
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/181 (37%), Positives = 101/181 (55%), Gaps = 17/181 (9%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP- 138
+ V + AY +I+ G+R CTN G+ + V+ T GS S+K+NI +VFG L P
Sbjct: 183 KMVQVLHAYCIISAGIRVSCTNQLGQGKRQPVVCTGGSPSIKENIGSVFGQKQLQSLIPF 242
Query: 139 VAICKSDS-CK---------------VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKV 182
V + SDS C+ + GF+S+ +G GR+ DRQ+FF+N RP D KV
Sbjct: 243 VQLPPSDSVCEEYGLSCSDALHNLFYISGFISQCARGVGRSSTDRQFFFINRRPCDPAKV 302
Query: 183 SKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEI 242
+LVNE+Y N QYP ++N V + D+NVTPDKR++ +E +L L+ L +
Sbjct: 303 CRLVNEVYHMYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLIGM 362
Query: 243 Y 243
+
Sbjct: 363 F 363
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 54/67 (80%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+PI++ VH+IC+G V+ LS+AVKELVENSLDAGAT+I++ LK+YG + +V DNGCG
Sbjct: 15 IKPIDRKSVHQICSGPVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSDNGCG 74
Query: 72 ISPNNFK 78
+ NF+
Sbjct: 75 VEEENFE 81
>gi|1709686|sp|P54279.1|PMS2_MOUSE RecName: Full=Mismatch repair endonuclease PMS2; AltName: Full=DNA
mismatch repair protein PMS2; AltName: Full=PMS1 protein
homolog 2
gi|896063|gb|AAA87031.1| PMS2 [Mus musculus]
Length = 859
Score = 216 bits (551), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 119/274 (43%), Positives = 160/274 (58%), Gaps = 30/274 (10%)
Query: 544 LQFSIQDLRKRRQQRLSIMQSSCHTSGSVKMRRCFAAATLELSQPENEERKARALAAATT 603
L+FS+ L KR +Q + + H K R ++ EN+ AA
Sbjct: 615 LEFSLSSLAKRMKQLQHLKAQNKHELSYRKFR-------AKICPGENQ--------AAED 659
Query: 604 ELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQP 663
EL + K F M+++GQFNLGFI+ KL +DLF+VDQHAADEKYNFE L Q TVL Q
Sbjct: 660 ELRKEISKSMFAEMEILGQFNLGFIVTKLKEDLFLVDQHAADEKYNFEMLQQHTVLQAQR 719
Query: 664 LLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVED 723
L+ P L+LT E V +++I RKNGF D A R +L ++P SK TFG +D
Sbjct: 720 LITPQTLNLTAVNEAVLIENLEIFRKNGFDFVIDEDAPVTERAKLISLPTSKNWTFGPQD 779
Query: 724 VKDLISTLADNQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGRNEMQ 782
+ +LI L+D+ G +C PSRVR M ASRACR S+MIG AL +EM+
Sbjct: 780 IDELIFMLSDSPG--------------VMCRPSRVRQMFASRACRKSVMIGTALNASEMK 825
Query: 783 KILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKN 816
K++ H+ +++ PWNCPHGRPTMRH+ +L I +N
Sbjct: 826 KLITHMGEMDHPWNCPHGRPTMRHVANLDVISQN 859
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 56/71 (78%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+PI+ VH+IC+GQVI LS+AVKEL+ENS+DAGAT+I++ LK+YG + +V DNGCG
Sbjct: 15 IKPIDGKSVHQICSGQVILSLSTAVKELIENSVDAGATTIDLRLKDYGVDLIEVSDNGCG 74
Query: 72 ISPNNFKVRAV 82
+ NF+ A+
Sbjct: 75 VEEENFEGLAL 85
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 89/194 (45%), Gaps = 21/194 (10%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP- 138
+ V + QAY +I+ GVR CTN G+ + V+ T G+S +K+NI +VFG L P
Sbjct: 183 KMVQVLQAYCIISAGVRVSCTNQLGQGKRHAVVCTSGTSGMKENIGSVFGQKQLQSLIPF 242
Query: 139 VAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDR------------------PVDLP 180
V + SD+ E LS G+ + + F + R PV
Sbjct: 243 VQLPPSDAVCEEYGLSTSGR--HKTFSTFRASFHSARTAPGGVQQTGSFSSSIRGPVTQQ 300
Query: 181 KVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQ 240
+ L Y N QYP ++N V + D+NVTPDKR++ +E +L L+ L
Sbjct: 301 RSLSLSMRFYHMYNRHQYPFVVLNVSVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLI 360
Query: 241 EIYSPNNASYSVNK 254
++ + +VN+
Sbjct: 361 GMFDSDANKLNVNQ 374
>gi|410253448|gb|JAA14691.1| PMS2 postmeiotic segregation increased 2 [Pan troglodytes]
Length = 862
Score = 216 bits (551), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 131/317 (41%), Positives = 179/317 (56%), Gaps = 39/317 (12%)
Query: 501 IVSSSNDLKKNSEDLSVAASHLQFSGSILDAPVPSSSLDICSTLQFSIQDLRKRRQQRLS 560
I+SSS+ +K V+AS + + I VP L FS+ L KR +Q
Sbjct: 584 ILSSSDICQKLVNTQDVSASQVDVAVKINKKVVP---------LDFSMSSLAKRIKQ--- 631
Query: 561 IMQSSCHTSGSVKMRRCFAAATLELSQPENEERKARALAAATTELERLFRKEDFGRMKVI 620
+ + + G R+ A ++ EN+ AA EL + K F M++I
Sbjct: 632 LHHEAQQSEGEQNYRKFRA----KICPGENQ--------AAEDELRKEISKTMFAEMEII 679
Query: 621 GQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVA 680
GQFNLGFII KL++D+FIVDQHA DEKYNFE L Q TVL Q L+ P L+LT E V
Sbjct: 680 GQFNLGFIITKLNEDIFIVDQHATDEKYNFEMLQQHTVLQGQRLIAPQTLNLTAVNEAVL 739
Query: 681 SMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSI 740
+++I RKNGF D +A R +L ++P SK TFG +DV +LI L+D+ G
Sbjct: 740 IENLEIFRKNGFDFVIDENAPVTERAKLISLPTSKNWTFGPQDVDELIFMLSDSPG---- 795
Query: 741 ISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPH 799
+C PSRV+ M ASRACR S+MIG AL +EM+K++ H+ +++ PWNCPH
Sbjct: 796 ----------VMCRPSRVKQMFASRACRKSVMIGTALNTSEMKKLITHMGEMDHPWNCPH 845
Query: 800 GRPTMRHLVDLTTIRKN 816
GRPTMRH+ +L I +N
Sbjct: 846 GRPTMRHIANLGVISQN 862
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/181 (37%), Positives = 101/181 (55%), Gaps = 17/181 (9%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP- 138
+ V + AY +I+ G+R CTN G+ + V+ T GS S+K+NI +VFG L P
Sbjct: 183 KMVQVLHAYCIISAGIRVSCTNQLGQGKRQPVVCTGGSPSIKENIGSVFGQKQLQSLIPF 242
Query: 139 VAICKSDS-CK---------------VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKV 182
V + SDS C+ + GF+S+ +G GR+ DRQ+FF+N RP D KV
Sbjct: 243 VQLPPSDSVCEEYGLSCSDALHNLFYISGFISQCARGVGRSSTDRQFFFINRRPCDPAKV 302
Query: 183 SKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEI 242
+LVNE+Y N QYP ++N V + D+NVTPDKR++ +E +L L+ L +
Sbjct: 303 CRLVNEVYHMYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLIGM 362
Query: 243 Y 243
+
Sbjct: 363 F 363
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 54/67 (80%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+PI++ VH+IC+G V+ LS+AVKELVENSLDAGAT+I++ LK+YG + +V DNGCG
Sbjct: 15 IKPIDRKSVHQICSGPVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSDNGCG 74
Query: 72 ISPNNFK 78
+ NF+
Sbjct: 75 VEEENFE 81
>gi|114612035|ref|XP_001141671.1| PREDICTED: mismatch repair endonuclease PMS2 isoform 2 [Pan
troglodytes]
Length = 862
Score = 216 bits (551), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 131/317 (41%), Positives = 179/317 (56%), Gaps = 39/317 (12%)
Query: 501 IVSSSNDLKKNSEDLSVAASHLQFSGSILDAPVPSSSLDICSTLQFSIQDLRKRRQQRLS 560
I+SSS+ +K V+AS + + I VP L FS+ L KR +Q
Sbjct: 584 ILSSSDICQKLVNTQDVSASQVDVAVKINKKVVP---------LDFSMSSLAKRIKQ--- 631
Query: 561 IMQSSCHTSGSVKMRRCFAAATLELSQPENEERKARALAAATTELERLFRKEDFGRMKVI 620
+ + + G R+ A ++ EN+ AA EL + K F M++I
Sbjct: 632 LHHEAQQSEGEQNYRKFRA----KICPGENQ--------AAEDELRKEISKTMFAEMEII 679
Query: 621 GQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVA 680
GQFNLGFII KL++D+FIVDQHA DEKYNFE L Q TVL Q L+ P L+LT E V
Sbjct: 680 GQFNLGFIITKLNEDIFIVDQHATDEKYNFEMLQQHTVLQGQRLIAPQTLNLTAVNEAVL 739
Query: 681 SMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSI 740
+++I RKNGF D +A R +L ++P SK TFG +DV +LI L+D+ G
Sbjct: 740 IENLEIFRKNGFDFVIDENAPVTERAKLISLPTSKNWTFGPQDVDELIFMLSDSPG---- 795
Query: 741 ISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPH 799
+C PSRV+ M ASRACR S+MIG AL +EM+K++ H+ +++ PWNCPH
Sbjct: 796 ----------VMCRPSRVKQMFASRACRKSVMIGTALNTSEMKKLITHMGEMDHPWNCPH 845
Query: 800 GRPTMRHLVDLTTIRKN 816
GRPTMRH+ +L I +N
Sbjct: 846 GRPTMRHIANLGVISQN 862
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/181 (37%), Positives = 101/181 (55%), Gaps = 17/181 (9%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP- 138
+ V + AY +I+ G+R CTN G+ + V+ T GS S+K+NI +VFG L P
Sbjct: 183 KMVQVLHAYCIISAGIRVSCTNQLGQGKRQPVVCTGGSPSIKENIGSVFGQKQLQSLIPF 242
Query: 139 VAICKSDS-CK---------------VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKV 182
V + SDS C+ + GF+S+ +G GR+ DRQ+FF+N RP D KV
Sbjct: 243 VQLPPSDSVCEEYGLSCSDALHNLFYISGFISQCARGVGRSSTDRQFFFINRRPCDPAKV 302
Query: 183 SKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEI 242
+LVNE+Y N QYP ++N V + D+NVTPDKR++ +E +L L+ L +
Sbjct: 303 CRLVNEVYHMYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLIGM 362
Query: 243 Y 243
+
Sbjct: 363 F 363
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 55/67 (82%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+PI++ VH+IC+GQV+ LS+AVKELVENSLDAGAT+I++ LK+YG + +V DNGCG
Sbjct: 15 IKPIDRKSVHQICSGQVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSDNGCG 74
Query: 72 ISPNNFK 78
+ NF+
Sbjct: 75 VEEENFE 81
>gi|121583910|ref|NP_032912.2| mismatch repair endonuclease PMS2 [Mus musculus]
gi|148687085|gb|EDL19032.1| postmeiotic segregation increased 2 (S. cerevisiae), isoform CRA_d
[Mus musculus]
gi|223461565|gb|AAI41288.1| Postmeiotic segregation increased 2 (S. cerevisiae) [Mus musculus]
Length = 859
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 119/274 (43%), Positives = 160/274 (58%), Gaps = 30/274 (10%)
Query: 544 LQFSIQDLRKRRQQRLSIMQSSCHTSGSVKMRRCFAAATLELSQPENEERKARALAAATT 603
L+FS+ L KR +Q + + H K R ++ EN+ AA
Sbjct: 615 LEFSLSSLAKRMKQLQHLKAQNKHELSYRKFR-------AKICPGENQ--------AAED 659
Query: 604 ELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQP 663
EL + K F M+++GQFNLGFI+ KL +DLF+VDQHAADEKYNFE L Q TVL Q
Sbjct: 660 ELRKEISKSMFAEMEILGQFNLGFIVTKLKEDLFLVDQHAADEKYNFEMLQQHTVLQAQR 719
Query: 664 LLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVED 723
L+ P L+LT E V +++I RKNGF D A R +L ++P SK TFG +D
Sbjct: 720 LITPQTLNLTAVNEAVLIENLEIFRKNGFDFVIDEDAPVTERAKLISLPTSKNWTFGPQD 779
Query: 724 VKDLISTLADNQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGRNEMQ 782
+ +LI L+D+ G +C PSRVR M ASRACR S+MIG AL +EM+
Sbjct: 780 IDELIFMLSDSPG--------------VMCRPSRVRQMFASRACRKSVMIGTALNASEMK 825
Query: 783 KILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKN 816
K++ H+ +++ PWNCPHGRPTMRH+ +L I +N
Sbjct: 826 KLITHMGEMDHPWNCPHGRPTMRHVANLDVISQN 859
Score = 132 bits (333), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 105/192 (54%), Gaps = 17/192 (8%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
+ V + QAY +I+ GVR CTN G+ + V+ T GSS +K+NI +VFG L P
Sbjct: 183 KMVQVLQAYCIISAGVRVSCTNQLGQGKRQPVVCTSGSSGMKENIGSVFGQKQLQSLIPF 242
Query: 140 -------AICKSDSCK----------VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKV 182
A+C+ V GF+S+ G+GR+ DRQ+FF+N RP D KV
Sbjct: 243 VQLPPSDAVCEEYGLSTSRTPQNLFYVSGFISQCTHGAGRSATDRQFFFINQRPCDPAKV 302
Query: 183 SKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEI 242
SKLVNE+Y N QYP ++N V + D+NVTPDKR++ +E +L L+ L +
Sbjct: 303 SKLVNEVYHMYNRHQYPFVVLNVSVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLIGM 362
Query: 243 YSPNNASYSVNK 254
+ + +VN+
Sbjct: 363 FDSDANKLNVNQ 374
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 56/71 (78%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+PI+ VH+IC+GQV+ LS+AVKEL+ENS+DAGAT+I++ LK+YG + +V DNGCG
Sbjct: 15 IKPIDGKSVHQICSGQVVLSLSTAVKELIENSVDAGATTIDLRLKDYGVDLIEVSDNGCG 74
Query: 72 ISPNNFKVRAV 82
+ NF+ A+
Sbjct: 75 VEEENFEGLAL 85
>gi|148687084|gb|EDL19031.1| postmeiotic segregation increased 2 (S. cerevisiae), isoform CRA_c
[Mus musculus]
Length = 850
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 119/274 (43%), Positives = 160/274 (58%), Gaps = 30/274 (10%)
Query: 544 LQFSIQDLRKRRQQRLSIMQSSCHTSGSVKMRRCFAAATLELSQPENEERKARALAAATT 603
L+FS+ L KR +Q + + H K R ++ EN+ AA
Sbjct: 606 LEFSLSSLAKRMKQLQHLKAQNKHELSYRKFR-------AKICPGENQ--------AAED 650
Query: 604 ELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQP 663
EL + K F M+++GQFNLGFI+ KL +DLF+VDQHAADEKYNFE L Q TVL Q
Sbjct: 651 ELRKEISKSMFAEMEILGQFNLGFIVTKLKEDLFLVDQHAADEKYNFEMLQQHTVLQAQR 710
Query: 664 LLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVED 723
L+ P L+LT E V +++I RKNGF D A R +L ++P SK TFG +D
Sbjct: 711 LITPQTLNLTAVNEAVLIENLEIFRKNGFDFVIDEDAPVTERAKLISLPTSKNWTFGPQD 770
Query: 724 VKDLISTLADNQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGRNEMQ 782
+ +LI L+D+ G +C PSRVR M ASRACR S+MIG AL +EM+
Sbjct: 771 IDELIFMLSDSPG--------------VMCRPSRVRQMFASRACRKSVMIGTALNASEMK 816
Query: 783 KILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKN 816
K++ H+ +++ PWNCPHGRPTMRH+ +L I +N
Sbjct: 817 KLITHMGEMDHPWNCPHGRPTMRHVANLDVISQN 850
Score = 132 bits (333), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 105/192 (54%), Gaps = 17/192 (8%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
+ V + QAY +I+ GVR CTN G+ + V+ T GSS +K+NI +VFG L P
Sbjct: 174 KMVQVLQAYCIISAGVRVSCTNQLGQGKRQPVVCTSGSSGMKENIGSVFGQKQLQSLIPF 233
Query: 140 -------AICKSDSCK----------VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKV 182
A+C+ V GF+S+ G+GR+ DRQ+FF+N RP D KV
Sbjct: 234 VQLPPSDAVCEEYGLSTSRTPQNLFYVSGFISQCTHGAGRSATDRQFFFINQRPCDPAKV 293
Query: 183 SKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEI 242
SKLVNE+Y N QYP ++N V + D+NVTPDKR++ +E +L L+ L +
Sbjct: 294 SKLVNEVYHMYNRHQYPFVVLNVSVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLIGM 353
Query: 243 YSPNNASYSVNK 254
+ + +VN+
Sbjct: 354 FDSDANKLNVNQ 365
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 56/71 (78%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+PI+ VH+IC+GQV+ LS+AVKEL+ENS+DAGAT+I++ LK+YG + +V DNGCG
Sbjct: 6 IKPIDGKSVHQICSGQVVLSLSTAVKELIENSVDAGATTIDLRLKDYGVDLIEVSDNGCG 65
Query: 72 ISPNNFKVRAV 82
+ NF+ A+
Sbjct: 66 VEEENFEGLAL 76
>gi|145348213|ref|XP_001418550.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578779|gb|ABO96843.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 829
Score = 216 bits (549), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 124/296 (41%), Positives = 170/296 (57%), Gaps = 36/296 (12%)
Query: 544 LQFSIQDLRKRRQQRLSIMQSSCHTSGSVKMRRCFAAATLELSQPENEERKARALAAATT 603
L FS++ +R RR+ S + ++ + K FAAA + E E A AAA +
Sbjct: 538 LAFSMETMRARRRNVRSEVVTTVDEASKSKSEIAFAAARIPAVDGETEPSHA-THAAAAS 596
Query: 604 ELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQP 663
ELER+F K DF +M+++GQFNLGFI+ L DLFIVDQHA+DE YNFERL +++ L +QP
Sbjct: 597 ELERVFNKADFAKMRIVGQFNLGFILAVLGDDLFIVDQHASDEIYNFERLQRTSTLTRQP 656
Query: 664 LLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEE---------------DPHALAGLRFRL 708
L+ P+ LDLT EE +M + +NGF + DP A G RL
Sbjct: 657 LIHPVPLDLTASEEQTVLQNMPVFLQNGFGFCDVAETVPGADMNNSSIDPTARCGA-LRL 715
Query: 709 KAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTA-----------------DS 751
AVPF K + F DV++L+S L +QG+ S+ S ++
Sbjct: 716 NAVPFLKNVAFDKSDVQELVSML--DQGQHSLPSKSQLSIGLAREDAAAARSRRDASPRV 773
Query: 752 VCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHL 807
+ PS+ RA LA +ACRSSIMIGDAL M+++L +L L++PWNCPHGRPTMRH+
Sbjct: 774 LRPSKTRAALAMKACRSSIMIGDALDARSMRRVLRNLGALDAPWNCPHGRPTMRHV 829
Score = 158 bits (399), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 74/186 (39%), Positives = 123/186 (66%), Gaps = 11/186 (5%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGS--SSLKDNIITVFGMNIYNCLE 137
RA+ + QAYAL++K VR +CT+ +GK ++ VL T+G +S+++N++TVFG + ++
Sbjct: 170 RALHVVQAYALMSKSVRILCTHQSGKYGRTNVLHTRGGEEASVRENVVTVFGAKMVAAMQ 229
Query: 138 PVAICKSD---------SCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNE 188
+ SD +C++ G++SK G GR DRQ+++VN RPVDLP+V+K++NE
Sbjct: 230 EIDFDLSDADGDGSSSLTCRIVGYVSKAQNGCGRAGTDRQFYYVNGRPVDLPRVAKVLNE 289
Query: 189 LYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNA 248
Y+ N Q P+A+++ +PT + DVNVTPDKRKV E +L ++E L E ++P+
Sbjct: 290 TYRSFNPNQAPMAVLDVQLPTDSYDVNVTPDKRKVMLHQEQELLTKMKEKLTEAFAPSRY 349
Query: 249 SYSVNK 254
+Y+V++
Sbjct: 350 TYAVSQ 355
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 52/67 (77%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ I+ VVHRIC+GQV+ L+S VKELVEN+LDAGAT++EI LK++G + +V DNG G
Sbjct: 1 IKRIDDVVVHRICSGQVVLSLASCVKELVENALDAGATNVEIRLKDHGADVVEVSDNGSG 60
Query: 72 ISPNNFK 78
+ +F+
Sbjct: 61 VPKASFE 67
>gi|58737041|dbj|BAD89429.1| postmeiotic segregation increased 2 nirs variant 5 [Homo sapiens]
Length = 756
Score = 216 bits (549), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 133/319 (41%), Positives = 183/319 (57%), Gaps = 43/319 (13%)
Query: 501 IVSSSNDLKK--NSEDLSVAASHLQFSGSILDAPVPSSSLDICSTLQFSIQDLRKRRQQR 558
I+SSS+ +K N++D+S AS + + I VP L FS+ L KR +Q
Sbjct: 478 ILSSSDICQKLVNTQDMS--ASQVDVAVKINKKVVP---------LDFSMSSLAKRIKQ- 525
Query: 559 LSIMQSSCHTSGSVKMRRCFAAATLELSQPENEERKARALAAATTELERLFRKEDFGRMK 618
+ + + G R+ A ++ EN+ AA EL + K F M+
Sbjct: 526 --LHHEAQQSEGEQNYRKFRA----KICPGENQ--------AAEDELRKEISKTMFAEME 571
Query: 619 VIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEV 678
+IGQFNLGFII KL++D+FIVDQHA DEKYNFE L Q TVL Q L+ P L+LT E
Sbjct: 572 IIGQFNLGFIITKLNEDIFIVDQHATDEKYNFEMLQQHTVLQGQRLIAPQTLNLTAVNEA 631
Query: 679 VASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGEC 738
V +++I RKNGF D +A R +L ++P SK TFG +DV +LI L+D+ G
Sbjct: 632 VLIENLEIFRKNGFDFVIDENAPVTERAKLISLPTSKNWTFGPQDVDELIFMLSDSPG-- 689
Query: 739 SIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNC 797
+C PSRV+ M ASRACR S+MIG AL +EM+K++ H+ +++ PWNC
Sbjct: 690 ------------VMCRPSRVKQMFASRACRKSVMIGTALNTSEMKKLITHMGEMDHPWNC 737
Query: 798 PHGRPTMRHLVDLTTIRKN 816
PHGRPTMRH+ +L I +N
Sbjct: 738 PHGRPTMRHIANLGVISQN 756
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/181 (37%), Positives = 100/181 (55%), Gaps = 17/181 (9%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP- 138
+ V + AY +I+ G+R CTN G+ + V+ T GS S+K+NI +VFG L P
Sbjct: 77 KMVQVLHAYCIISAGIRVSCTNQLGQGKRQPVVCTGGSPSIKENIGSVFGQKQLQSLIPF 136
Query: 139 VAICKSDS-CK---------------VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKV 182
V + SDS C+ + GF+S+ G GR+ DRQ+FF+N RP D KV
Sbjct: 137 VQLPPSDSVCEEYGLSCSDALHNLFYISGFISQCTHGVGRSSTDRQFFFINRRPCDPAKV 196
Query: 183 SKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEI 242
+LVNE+Y N QYP ++N V + D+NVTPDKR++ +E +L L+ L +
Sbjct: 197 CRLVNEVYHMYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLIGM 256
Query: 243 Y 243
+
Sbjct: 257 F 257
>gi|405973456|gb|EKC38171.1| Mismatch repair endonuclease PMS2 [Crassostrea gigas]
Length = 794
Score = 216 bits (549), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 109/230 (47%), Positives = 146/230 (63%), Gaps = 21/230 (9%)
Query: 593 RKARAL------AAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADE 646
RK RA+ +A EL R K F M+++GQFNLGFII KL DLFIVDQHA DE
Sbjct: 579 RKFRAVISPTENQSAEEELSREISKSMFKEMEILGQFNLGFIIAKLKDDLFIVDQHATDE 638
Query: 647 KYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRF 706
KYNFE L Q TV+ Q L++P L+LT E+ ++++ RKNGF D +A R
Sbjct: 639 KYNFEMLQQHTVIQCQKLIQPQSLELTASNEITLIDNLEVFRKNGFDFVIDENAPPMQRV 698
Query: 707 RLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVC-PSRVRAMLASRA 765
+L ++P S+ TFG ED+++LI L+ D+ + +C PSRVR M ASRA
Sbjct: 699 KLTSIPVSRNWTFGKEDIEELIFMLS--------------DSPNVMCRPSRVRQMFASRA 744
Query: 766 CRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRK 815
CR SIMIG AL ++EM+K++ H+ ++ PWNCPHGRPTMRHL++L + K
Sbjct: 745 CRKSIMIGTALKKSEMKKLVCHMGEIEQPWNCPHGRPTMRHLINLNMVPK 794
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 90/178 (50%), Gaps = 32/178 (17%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFG---------- 129
+ V + +Y +I+ GVR C+N T K +S V+ + G+ +L++NI VFG
Sbjct: 132 KMVQVLTSYCIISTGVRITCSNQTKKGGRSTVVSSSGNKTLRENIADVFGPKQMQSLMEF 191
Query: 130 ---------MNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLP 180
M+ +N I D ++EGF+SK G GR+ DRQ+ F+N RP D
Sbjct: 192 KKYDPSEEVMDEFNLKLTEDI--GDCFRMEGFVSKCAHGQGRSSTDRQFIFINGRPCDSA 249
Query: 181 KVSKLVNELYKGANSRQY--PIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALR 236
K + EL + S Q P +I ++ DVNVTPDKR++F +E +L ++
Sbjct: 250 KDE--MRELVETVRSLQLLRPDSI-------QSVDVNVTPDKRQIFMENEKILLATIK 298
>gi|148687082|gb|EDL19029.1| postmeiotic segregation increased 2 (S. cerevisiae), isoform CRA_a
[Mus musculus]
Length = 676
Score = 216 bits (549), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 119/274 (43%), Positives = 160/274 (58%), Gaps = 30/274 (10%)
Query: 544 LQFSIQDLRKRRQQRLSIMQSSCHTSGSVKMRRCFAAATLELSQPENEERKARALAAATT 603
L+FS+ L KR +Q + + H K R ++ EN+ AA
Sbjct: 432 LEFSLSSLAKRMKQLQHLKAQNKHELSYRKFR-------AKICPGENQ--------AAED 476
Query: 604 ELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQP 663
EL + K F M+++GQFNLGFI+ KL +DLF+VDQHAADEKYNFE L Q TVL Q
Sbjct: 477 ELRKEISKSMFAEMEILGQFNLGFIVTKLKEDLFLVDQHAADEKYNFEMLQQHTVLQAQR 536
Query: 664 LLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVED 723
L+ P L+LT E V +++I RKNGF D A R +L ++P SK TFG +D
Sbjct: 537 LITPQTLNLTAVNEAVLIENLEIFRKNGFDFVIDEDAPVTERAKLISLPTSKNWTFGPQD 596
Query: 724 VKDLISTLADNQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGRNEMQ 782
+ +LI L+D+ G +C PSRVR M ASRACR S+MIG AL +EM+
Sbjct: 597 IDELIFMLSDSPG--------------VMCRPSRVRQMFASRACRKSVMIGTALNASEMK 642
Query: 783 KILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKN 816
K++ H+ +++ PWNCPHGRPTMRH+ +L I +N
Sbjct: 643 KLITHMGEMDHPWNCPHGRPTMRHVANLDVISQN 676
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 104/190 (54%), Gaps = 17/190 (8%)
Query: 82 VFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV-- 139
V + QAY +I+ GVR CTN G+ + V+ T GSS +K+NI +VFG L P
Sbjct: 2 VQVLQAYCIISAGVRVSCTNQLGQGKRQPVVCTSGSSGMKENIGSVFGQKQLQSLIPFVQ 61
Query: 140 -----AICKSDSCK----------VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSK 184
A+C+ V GF+S+ G+GR+ DRQ+FF+N RP D KVSK
Sbjct: 62 LPPSDAVCEEYGLSTSRTPQNLFYVSGFISQCTHGAGRSATDRQFFFINQRPCDPAKVSK 121
Query: 185 LVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYS 244
LVNE+Y N QYP ++N V + D+NVTPDKR++ +E +L L+ L ++
Sbjct: 122 LVNEVYHMYNRHQYPFVVLNVSVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLIGMFD 181
Query: 245 PNNASYSVNK 254
+ +VN+
Sbjct: 182 SDANKLNVNQ 191
>gi|355560440|gb|EHH17126.1| PMS2 like protein, partial [Macaca mulatta]
Length = 820
Score = 215 bits (548), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 115/242 (47%), Positives = 150/242 (61%), Gaps = 23/242 (9%)
Query: 584 ELSQPENEE--RKARAL------AAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQD 635
E Q E E+ RK RA AA EL + K F M+++GQFNLGFII KL++D
Sbjct: 593 ETQQSEGEQNYRKFRAKICPGENQAAEDELRKEISKTMFAEMEIVGQFNLGFIITKLNED 652
Query: 636 LFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLE 695
LFIVDQHA DEKYNFE L Q TVL Q L+ P L+LT E V +++I RKNGF
Sbjct: 653 LFIVDQHATDEKYNFEMLQQHTVLQGQRLIAPQTLNLTAVNEAVLIENLEIFRKNGFDFV 712
Query: 696 EDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVC-P 754
D +A R +L ++P SK TFG +D+ +LI L+D+ G +C P
Sbjct: 713 IDENAPVTERAKLISLPTSKNWTFGPQDIDELIFLLSDSPG--------------VMCRP 758
Query: 755 SRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIR 814
SRV+ M ASRACR S+MIG AL +EM+K++ H+ +++ PWNCPHGRPTMRH+ +L I
Sbjct: 759 SRVKQMFASRACRKSVMIGTALNTSEMKKLITHMGEMDHPWNCPHGRPTMRHIANLGVIS 818
Query: 815 KN 816
+N
Sbjct: 819 QN 820
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 55/67 (82%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+PI++ VH+IC+GQV+ LS+AVKELVENSLDAGAT+I++ LK+YG + +V DNGCG
Sbjct: 8 IKPIDRKSVHQICSGQVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSDNGCG 67
Query: 72 ISPNNFK 78
+ NF+
Sbjct: 68 VEEENFE 74
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 81/160 (50%), Gaps = 18/160 (11%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
+ V + QAY +I+ G+R CTN G+ + V+ T GS S+K+NI +VFG + + V
Sbjct: 176 KMVQVLQAYCIISAGIRVSCTNQLGQGKRQPVVCTGGSPSIKENIGSVFGQKQQSLIPFV 235
Query: 140 AICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQYP 199
+ SDS E LS D + VS+LVNE+Y N QYP
Sbjct: 236 QVPPSDSVCEEYGLS---------CSDALHNLF---------VSRLVNEVYHMYNRHQYP 277
Query: 200 IAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGL 239
++N V + D+NVTPDKR++ +E +L L+ L
Sbjct: 278 FVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSL 317
>gi|410253452|gb|JAA14693.1| PMS2 postmeiotic segregation increased 2 [Pan troglodytes]
Length = 862
Score = 215 bits (548), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 116/242 (47%), Positives = 150/242 (61%), Gaps = 23/242 (9%)
Query: 584 ELSQPENEE--RKARAL------AAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQD 635
E Q E E+ RK RA AA EL + K F M++IGQFNLGFII KL++D
Sbjct: 635 EAQQSEGEQNYRKFRAKICPGENQAAEDELRKEISKTMFAEMEIIGQFNLGFIITKLNED 694
Query: 636 LFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLE 695
+FIVDQHA DEKYNFE L Q TVL Q L+ P L+LT E V +++I RKNGF
Sbjct: 695 IFIVDQHATDEKYNFEMLQQHTVLQGQRLIAPQTLNLTAVNEAVLIENLEIFRKNGFDFV 754
Query: 696 EDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVC-P 754
D +A R +L ++P SK TFG +DV +LI L+D+ G +C P
Sbjct: 755 IDENAPVTERAKLISLPTSKNWTFGPQDVDELIFMLSDSPG--------------VMCRP 800
Query: 755 SRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIR 814
SRV+ M ASRACR S+MIG AL +EM+K++ H+ +++ PWNCPHGRPTMRH+ +L I
Sbjct: 801 SRVKQMFASRACRKSVMIGTALNTSEMKKLITHMGEMDHPWNCPHGRPTMRHIANLGVIS 860
Query: 815 KN 816
+N
Sbjct: 861 QN 862
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 68/181 (37%), Positives = 101/181 (55%), Gaps = 17/181 (9%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP- 138
+ V + AY +I+ G+R CTN G+ + V+ T GS S+K+NI +VFG L P
Sbjct: 183 KMVQVLHAYCIISAGIRVSCTNQLGQGKRQPVVCTGGSPSIKENIGSVFGQKQLQSLIPF 242
Query: 139 VAICKSDS-CK---------------VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKV 182
V + SDS C+ + GF+S+ +G GR+ DRQ+FF+N RP D KV
Sbjct: 243 VQLPPSDSVCEEYGLSCSDALHNLFYISGFISQCARGVGRSSTDRQFFFINRRPCDPAKV 302
Query: 183 SKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEI 242
+LVNE+Y N QYP ++N V + D+NVTPDKR++ +E +L L+ L +
Sbjct: 303 CRLVNEVYHMYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLIGM 362
Query: 243 Y 243
+
Sbjct: 363 F 363
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 54/67 (80%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+PI++ VH+IC+G V+ LS+AVKELVENSLDAGAT+I++ LK+YG + +V DNGCG
Sbjct: 15 IKPIDRKSVHQICSGPVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSDNGCG 74
Query: 72 ISPNNFK 78
+ NF+
Sbjct: 75 VEEENFE 81
>gi|354467731|ref|XP_003496322.1| PREDICTED: mismatch repair endonuclease PMS2 [Cricetulus griseus]
Length = 864
Score = 215 bits (547), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 121/274 (44%), Positives = 162/274 (59%), Gaps = 30/274 (10%)
Query: 544 LQFSIQDLRKRRQQRLSIMQSSCHTSGSVKMRRCFAAATLELSQPENEERKARALAAATT 603
L FS+ L KR +Q +Q + S + R F A ++ EN+ AA
Sbjct: 620 LDFSMSSLAKRMKQ----LQHQKQRNDSKQSYRKFRA---KICPGENQ--------AAED 664
Query: 604 ELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQP 663
EL + K F M+++GQFNLGFII KL +DLF+VDQHAADEKYNFE L Q TVL Q
Sbjct: 665 ELRKEISKSMFAEMEILGQFNLGFIITKLKEDLFLVDQHAADEKYNFEMLQQHTVLQVQR 724
Query: 664 LLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVED 723
L+ P L+LT E V +++I +KNGF D A R +L ++P SK TFG +D
Sbjct: 725 LITPQTLNLTAVNEAVLIENLEIFKKNGFDFVIDEDAPVTERAKLISLPTSKNWTFGPQD 784
Query: 724 VKDLISTLADNQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGRNEMQ 782
+ +LI L+D+ G +C PSRVR M ASRACR S+MIG AL +EM+
Sbjct: 785 IDELIFMLSDSPG--------------VMCRPSRVRQMFASRACRKSVMIGTALNTSEMK 830
Query: 783 KILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKN 816
K++ H+ +++ PWNCPHGRPTMRH+ +L I +N
Sbjct: 831 KLITHMGEMDHPWNCPHGRPTMRHIANLDVISQN 864
Score = 135 bits (340), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 109/192 (56%), Gaps = 17/192 (8%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP- 138
+ V + QAY +I+ G+R CTN G+ + V+ T GSSS+K+NI +VFG L P
Sbjct: 183 KMVQVLQAYCIISTGIRVSCTNQLGQGKRQPVVCTSGSSSMKENISSVFGQKQLQSLIPF 242
Query: 139 VAICKSDS-CK---------------VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKV 182
V + SDS C+ + GF+S GSGR+ DRQ+FF+N RP D KV
Sbjct: 243 VQLPPSDSVCEEYGLSCSKTTHSLFCISGFISHCTHGSGRSSTDRQFFFINRRPCDPAKV 302
Query: 183 SKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEI 242
SKLVNE+Y N QYP ++N V + D+NVTPDKR++ +E +L L+ L +
Sbjct: 303 SKLVNEVYHMYNRHQYPCVVLNISVDSECVDINVTPDKRQILLQEEKLLLAILKTSLIGM 362
Query: 243 YSPNNASYSVNK 254
+ + ++VN+
Sbjct: 363 FDSDANKFNVNQ 374
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 56/71 (78%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+PI+ VH+IC+GQV+ LS+AVKEL+ENS+DAGATSI++ LK+YG + +V DNGCG
Sbjct: 15 IKPIDGRSVHQICSGQVVLSLSTAVKELIENSVDAGATSIDLRLKDYGVDLIEVSDNGCG 74
Query: 72 ISPNNFKVRAV 82
+ NF+ A+
Sbjct: 75 VEEENFEGLAL 85
>gi|58737035|dbj|BAD89426.1| postmeiotic segregation increased 2 nirs variant 2 [Homo sapiens]
Length = 461
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 107/213 (50%), Positives = 139/213 (65%), Gaps = 15/213 (7%)
Query: 605 LERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPL 664
L LF K F M++IGQFNLGFII KL++D+FIVDQHA DEKYNFE L Q TVL Q L
Sbjct: 263 LHNLFYKTMFAEMEIIGQFNLGFIITKLNEDIFIVDQHATDEKYNFEMLQQHTVLQGQRL 322
Query: 665 LRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDV 724
+ P L+LT E V +++I RKNGF D +A R +L ++P SK TFG +DV
Sbjct: 323 IAPQTLNLTAVNEAVLIENLEIFRKNGFDFVIDENAPVTERAKLISLPTSKNWTFGPQDV 382
Query: 725 KDLISTLADNQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGRNEMQK 783
+LI L+D+ G +C PSRV+ M ASRACR S+MIG AL +EM+K
Sbjct: 383 DELIFMLSDSPG--------------VMCRPSRVKQMFASRACRKSVMIGTALNTSEMKK 428
Query: 784 ILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKN 816
++ H+ +++ PWNCPHGRPTMRH+ +L I +N
Sbjct: 429 LITHMGEMDHPWNCPHGRPTMRHIANLGVISQN 461
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 55/67 (82%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+PI++ VH+IC+GQV+ LS+AVKELVENSLDAGAT+I++ LK+YG + +V DNGCG
Sbjct: 15 IKPIDRKSVHQICSGQVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSDNGCG 74
Query: 72 ISPNNFK 78
+ NF+
Sbjct: 75 VEEENFE 81
Score = 46.6 bits (109), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP- 138
+ V + AY +I+ G+R CTN G+ + V+ T GS S+K+NI +VFG L P
Sbjct: 183 KMVQVLHAYCIISAGIRVSCTNQLGQGKRQPVVCTGGSPSIKENIGSVFGQKQLQSLIPF 242
Query: 139 VAICKSDSCKVEGFLS 154
V + SDS E LS
Sbjct: 243 VQLPPSDSVCEEYGLS 258
>gi|384252763|gb|EIE26239.1| hypothetical protein COCSUDRAFT_83614, partial [Coccomyxa
subellipsoidea C-169]
Length = 181
Score = 214 bits (546), Expect = 1e-52, Method: Composition-based stats.
Identities = 107/197 (54%), Positives = 130/197 (65%), Gaps = 19/197 (9%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLT 673
F RM V+GQFNLGFI+ KL +DLFIVDQHAADEKYNFERL Q T+LN+QPLLRP L LT
Sbjct: 1 FARMDVVGQFNLGFILAKLGKDLFIVDQHAADEKYNFERLQQITLLNRQPLLRPQPLHLT 60
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
P E ++ +DI NGF +ED + L AVPFSK FG++DV++L+
Sbjct: 61 PAEAILLKDKIDIFHTNGFDFKEDDQG----QLHLTAVPFSKDTVFGIQDVQELL----- 111
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNS 793
+ M + +S VRAMLA RACRSS+MIG AL ++MQ IL L+ L S
Sbjct: 112 ----------HLMISGNSAAFQMVRAMLAMRACRSSVMIGKALTASQMQTILSRLSALES 161
Query: 794 PWNCPHGRPTMRHLVDL 810
PWNCPHGRPT+RHL L
Sbjct: 162 PWNCPHGRPTLRHLSTL 178
>gi|380794609|gb|AFE69180.1| mismatch repair endonuclease PMS2 isoform a, partial [Macaca
mulatta]
Length = 853
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 115/242 (47%), Positives = 150/242 (61%), Gaps = 23/242 (9%)
Query: 584 ELSQPENEE--RKARAL------AAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQD 635
E Q E E+ RK RA AA EL + K F M+++GQFNLGFII KL++D
Sbjct: 626 ETQQSEGEQNYRKFRAKICPGENQAAEDELRKEISKTMFAEMEIVGQFNLGFIITKLNED 685
Query: 636 LFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLE 695
LFIVDQHA DEKYNFE L Q TVL Q L+ P L+LT E V +++I RKNGF
Sbjct: 686 LFIVDQHATDEKYNFEMLQQHTVLQGQRLIAPQTLNLTAVNEAVLIENLEIFRKNGFDFV 745
Query: 696 EDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVC-P 754
D +A R +L ++P SK TFG +D+ +LI L+D+ G +C P
Sbjct: 746 IDENAPVTERAKLISLPTSKNWTFGPQDIDELIFLLSDSPG--------------VMCRP 791
Query: 755 SRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIR 814
SRV+ M ASRACR S+MIG AL +EM+K++ H+ +++ PWNCPHGRPTMRH+ +L I
Sbjct: 792 SRVKQMFASRACRKSVMIGTALNTSEMKKLITHMGEMDHPWNCPHGRPTMRHVANLGVIS 851
Query: 815 KN 816
+N
Sbjct: 852 QN 853
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 102/181 (56%), Gaps = 17/181 (9%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP- 138
+ V + QAY +I+ G+R CTN G+ + V+ T GS S+K+NI +VFG L P
Sbjct: 174 KMVQVLQAYCIISAGIRVSCTNQLGQGKRQPVVCTGGSPSIKENIGSVFGQKQVQSLIPF 233
Query: 139 VAICKSDS-CK---------------VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKV 182
V + SDS C+ + GF+S+ G GR+ DRQ+FF+N RP D KV
Sbjct: 234 VQVPPSDSVCEEYGLSCSDALHNLFYISGFISQCTHGVGRSSTDRQFFFINRRPCDPAKV 293
Query: 183 SKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEI 242
S+LVNE+Y N QYP ++N V + D+NVTPDKR++ +E +L L+ L +
Sbjct: 294 SRLVNEVYHMYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLIGM 353
Query: 243 Y 243
+
Sbjct: 354 F 354
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 55/67 (82%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+PI++ VH+IC+GQV+ LS+AVKELVENSLDAGAT+I++ LK+YG + +V DNGCG
Sbjct: 6 IKPIDRKSVHQICSGQVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSDNGCG 65
Query: 72 ISPNNFK 78
+ NF+
Sbjct: 66 VEEENFE 72
>gi|432921871|ref|XP_004080263.1| PREDICTED: uncharacterized protein LOC101169320 [Oryzias latipes]
Length = 828
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 121/274 (44%), Positives = 163/274 (59%), Gaps = 31/274 (11%)
Query: 544 LQFSIQDLRKRRQQRLSIMQSSCHTSGSVKMRRCFAAATLELSQPENEERKARALAAATT 603
LQFS+Q+L L ++Q S ++ RR A +++ EN+ +A
Sbjct: 585 LQFSLQEL----MGNLKLLQEQRRKSDGLQYRRFRA----KINPGENQ--------SAEE 628
Query: 604 ELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQP 663
EL + K+ F MK+IGQFNLGFII KL+ D+FI+DQHA DEKYNFE L Q T+L Q
Sbjct: 629 ELRKEISKDMFKEMKIIGQFNLGFIITKLNSDIFIIDQHATDEKYNFEMLQQHTLLQGQK 688
Query: 664 LLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVED 723
L+ P KL LT E V ++++ RKNGF D A R RL ++P SK TFG D
Sbjct: 689 LIAPQKLHLTAISENVLMENIEVFRKNGFEFLIDEDAQVMERVRLVSLPTSKNWTFGPAD 748
Query: 724 VKDLISTLADNQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGRNEMQ 782
+++LI L+D+ G +C PSRVR M ASRACR S+MIG AL +EM+
Sbjct: 749 IEELIFMLSDSPG--------------VMCRPSRVRQMFASRACRKSVMIGTALSVSEMK 794
Query: 783 KILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKN 816
K++ H+ ++ PWNCPHGRPTMRHL +L I ++
Sbjct: 795 KLVVHMGEIEHPWNCPHGRPTMRHLANLDIISQD 828
Score = 134 bits (338), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/212 (33%), Positives = 108/212 (50%), Gaps = 22/212 (10%)
Query: 79 VRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP 138
+ + + QAY +I+ GVR C+N +G+ + VL T GS S+++NI +FG L P
Sbjct: 180 AKMIHVLQAYCIISAGVRLTCSNQSGRGKRVTVLSTSGSQSMRENIGAIFGPKQLQSLLP 239
Query: 139 V-----------------AICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPK 181
A + GF+S+ G GR+ DRQ+FF+N+RP D K
Sbjct: 240 FQQTSPSENVLEEYGLKEAELPEQLFSIAGFISRSDHGVGRSATDRQFFFINNRPCDPLK 299
Query: 182 VSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQE 241
++K+VNE+Y N QYP +N V + DVNVTPDKR++F +E +L L+ L
Sbjct: 300 ITKVVNEVYHSYNRHQYPFVALNIAVASECVDVNVTPDKRQIFLQEEKVLLATLKTSLIN 359
Query: 242 IYSPNNASYSVNKVEQLIEPEKSGPSSGAESC 273
+Y VNK+ + KS S+ + C
Sbjct: 360 MYEAG-----VNKISLNLPFPKSTSSTSGQVC 386
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 52/67 (77%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ I+K VH+IC+GQV+ L++AVKELVENS+DAGAT+I+I L++ G E +V DNG G
Sbjct: 13 IKAIDKHSVHQICSGQVVLSLATAVKELVENSVDAGATNIDIKLRDCGVEQIEVSDNGKG 72
Query: 72 ISPNNFK 78
+ NF+
Sbjct: 73 VKEANFE 79
>gi|449283315|gb|EMC89990.1| Mismatch repair endonuclease PMS2, partial [Columba livia]
Length = 893
Score = 214 bits (546), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 107/215 (49%), Positives = 138/215 (64%), Gaps = 15/215 (6%)
Query: 600 AATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVL 659
A EL + KE F +M++IGQFNLGFII KL+ DLFI+DQHA DEKYNFE L Q TVL
Sbjct: 690 VAEDELRKEISKEMFAKMEIIGQFNLGFIIAKLNSDLFIIDQHATDEKYNFEMLQQHTVL 749
Query: 660 NQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITF 719
Q L+ P L+LT E V +++I RKNGF + +A A + +L ++P SK TF
Sbjct: 750 QGQKLIAPQNLNLTAVNETVLIENLEIFRKNGFDFVINENAPATQKVKLVSLPTSKNWTF 809
Query: 720 GVEDVKDLISTLADNQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGR 778
G +D+ +LI L+D G ++C PSRVR M ASRACR S+MIG AL
Sbjct: 810 GAQDIDELIFMLSDCPG--------------AMCRPSRVRQMFASRACRKSVMIGTALSV 855
Query: 779 NEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTI 813
EM+K++ H+ ++ PWNCPHGRPTMRH+V L I
Sbjct: 856 QEMRKLVTHMGEIEHPWNCPHGRPTMRHVVSLDLI 890
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 105/192 (54%), Gaps = 17/192 (8%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
+ V + QAY +++KGVR CTN G+ K V+ T GS SLK+NI VFG L P
Sbjct: 198 KMVQVLQAYCIVSKGVRINCTNQVGQGKKCCVVSTAGSPSLKENIGAVFGQKQLQSLIPF 257
Query: 140 -------AICK----------SDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKV 182
A+C+ + + GF+S+ G GR+ DRQ+FF+N RP D KV
Sbjct: 258 VQLPPNEAVCEEYGLSATDVPQNLYSITGFISRCDHGVGRSTTDRQFFFINQRPCDPAKV 317
Query: 183 SKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEI 242
KLVNE+Y N QYP ++N V + D+NVTPDKR++ +E +L L+ L E+
Sbjct: 318 VKLVNEVYHLYNKHQYPFVVLNICVDSECVDINVTPDKRQILLQEEKLLLAILKASLTEM 377
Query: 243 YSPNNASYSVNK 254
+ + +VN+
Sbjct: 378 FGSDVNKLNVNQ 389
Score = 89.4 bits (220), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 58/75 (77%), Gaps = 2/75 (2%)
Query: 6 PTNSP--TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWF 63
P+ +P IRPI++ VHRIC+GQV+ +L +AVKELVENSLDAGAT+I+I LK++G E
Sbjct: 22 PSAAPGGAIRPIDRRSVHRICSGQVVLNLGTAVKELVENSLDAGATNIDIKLKDHGAELI 81
Query: 64 QVVDNGCGISPNNFK 78
+V DNG G+ NF+
Sbjct: 82 EVSDNGDGVEEENFE 96
>gi|311250873|ref|XP_003124331.1| PREDICTED: mismatch repair endonuclease PMS2 [Sus scrofa]
Length = 852
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 109/218 (50%), Positives = 140/218 (64%), Gaps = 15/218 (6%)
Query: 600 AATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVL 659
AA EL + KE F M++IGQFNLGFII KL+ D+FIVDQHA DEKYNFE L Q TVL
Sbjct: 649 AAEDELRKEISKEMFAEMEIIGQFNLGFIITKLNADIFIVDQHATDEKYNFEMLQQHTVL 708
Query: 660 NQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITF 719
Q L+ P L+LT E V ++DI RKNGF D A R +L ++P SK TF
Sbjct: 709 QGQRLIVPQTLNLTAVNEAVLIENLDIFRKNGFDFVIDEDAPVTERAKLISLPTSKNWTF 768
Query: 720 GVEDVKDLISTLADNQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGR 778
G +D+ +LI L+D+ G +C PSRVR M ASRACR S+MIG AL
Sbjct: 769 GPQDIDELIFMLSDSPG--------------VMCRPSRVRQMFASRACRKSVMIGTALNT 814
Query: 779 NEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKN 816
+EM++++ H+ +++ PWNCPHGRPTMRH+ +L I +N
Sbjct: 815 SEMRRLVSHMGEMDHPWNCPHGRPTMRHIANLDVISQN 852
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 103/182 (56%), Gaps = 17/182 (9%)
Query: 79 VRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGM-NIYNCLE 137
+ V + AY +I+ GVR CTN G+ + V+ T G +S+K+NI +VFG + + +
Sbjct: 182 AKMVQVLHAYCIISSGVRVTCTNQVGQGKRQPVVSTSGGASIKENIGSVFGQKQLQSLIS 241
Query: 138 PVAICKSDS-CK---------------VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPK 181
V + SDS C+ + GF+S+ G GR+ DRQ+FF+N RP D K
Sbjct: 242 FVQLPPSDSVCEEFGLSCSDALHNLFCISGFISRCTHGVGRSSTDRQFFFINRRPCDPAK 301
Query: 182 VSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQE 241
VS+LVNE+Y N QYP ++N V + D+NVTPDKR++ +E +L L+ L +
Sbjct: 302 VSRLVNEVYHLYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLID 361
Query: 242 IY 243
++
Sbjct: 362 MF 363
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 55/68 (80%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
I+PI++ VH+IC+GQV+ LS+AVKELVENS+DAGAT+I++ LK+YG + +V DNGC
Sbjct: 14 AIKPIDRKSVHQICSGQVVLSLSTAVKELVENSVDAGATNIDLRLKDYGMDLIEVSDNGC 73
Query: 71 GISPNNFK 78
G+ NF+
Sbjct: 74 GVEEENFE 81
>gi|443684699|gb|ELT88556.1| hypothetical protein CAPTEDRAFT_218769 [Capitella teleta]
Length = 469
Score = 214 bits (545), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 105/216 (48%), Positives = 144/216 (66%), Gaps = 15/216 (6%)
Query: 600 AATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVL 659
+A EL R +KE F M+++GQFNLGF+I +L+QDLFI+DQHA+DEKYNFE L + TVL
Sbjct: 265 SAEEELRREIKKESFCAMEILGQFNLGFVIARLNQDLFIIDQHASDEKYNFEMLQKHTVL 324
Query: 660 NQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITF 719
+ Q L+ P L LT EV+ ++DI ++NGF+ E D R +L + P SK F
Sbjct: 325 SSQRLVCPQILPLTAANEVILMDNLDIFKRNGFAFEVDEEGPPTQRVKLVSKPISKNWEF 384
Query: 720 GVEDVKDLISTLADNQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGR 778
G +D+++L+ L+D+ G +C P+RVR MLASRACR SIMIG AL +
Sbjct: 385 GRDDIEELVFMLSDSSG--------------IMCRPTRVRQMLASRACRKSIMIGTALNQ 430
Query: 779 NEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIR 814
EM K+L H++++ PWNCPHGRPTMRHL++L I+
Sbjct: 431 PEMNKLLRHMSEIEHPWNCPHGRPTMRHLINLDRIK 466
Score = 102 bits (255), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 70/111 (63%)
Query: 146 SCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQYPIAIMNF 205
+ ++ GF+S+P G GR DRQ++F+N RP D K+S++VNE Y N Q+P ++N
Sbjct: 3 TFRITGFVSRPEHGVGRGSCDRQFYFINRRPCDPQKISRVVNEAYHMFNRHQFPFVLLNI 62
Query: 206 IVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASYSVNKVE 256
+ A DVNVTPDKR+VF E +L L+ L +++ + SYS+N+ E
Sbjct: 63 SLVNDAVDVNVTPDKRQVFIQHEKLLLATLKASLVKLFEQKSTSYSLNQPE 113
>gi|338712534|ref|XP_001494013.2| PREDICTED: mismatch repair endonuclease PMS2 [Equus caballus]
Length = 868
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 110/218 (50%), Positives = 138/218 (63%), Gaps = 15/218 (6%)
Query: 600 AATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVL 659
AA EL + K F M++IGQFNLGFII KLD D+FIVDQHA DEKYNFE L Q TVL
Sbjct: 665 AAEDELRKEISKTMFAEMEIIGQFNLGFIITKLDADIFIVDQHATDEKYNFEMLQQHTVL 724
Query: 660 NQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITF 719
Q L+ P L+LT E V +++I RKNGF D A R +L ++P SK TF
Sbjct: 725 QGQRLIAPQTLNLTAVNEAVLIENLEIFRKNGFDFVIDEGAPVTERAKLISLPTSKNWTF 784
Query: 720 GVEDVKDLISTLADNQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGR 778
G +DV +LI L+D+ G +C PSRVR M ASRACR S+MIG AL
Sbjct: 785 GPQDVDELIFMLSDSPG--------------VMCRPSRVRQMFASRACRKSVMIGTALNA 830
Query: 779 NEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKN 816
+EM+K++ H+ +++ PWNCPHGRPTMRH+ +L I N
Sbjct: 831 SEMRKLITHMGEMDHPWNCPHGRPTMRHIANLDVISPN 868
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 106/192 (55%), Gaps = 17/192 (8%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP- 138
+ + + AY +I+ GVR CTN G+ + V+ T GS+S+K+NI +VFG L P
Sbjct: 183 KMIQVLHAYCIISAGVRVSCTNQVGQGKRQPVVCTSGSTSIKENIGSVFGQKQLQSLIPF 242
Query: 139 VAICKSDS-CK---------------VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKV 182
V + SDS C+ + GF+S+ G GR+ DRQ+FF+N RP D KV
Sbjct: 243 VQLPPSDSVCEEYGLSCSDALHNLFCISGFISRCTHGVGRSSTDRQFFFINRRPCDPAKV 302
Query: 183 SKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEI 242
S+LVNE+Y N QYP ++N V + D+NVTPDKR++ +E +L L+ L +
Sbjct: 303 SRLVNEVYHMYNRHQYPFVVLNVSVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLIGM 362
Query: 243 YSPNNASYSVNK 254
+ +VN+
Sbjct: 363 FDSEVNKLNVNQ 374
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 55/67 (82%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+PI++ VH+IC+GQV+ LS+AVKELVENS+DAGAT+I++ LK+YG + +V DNGCG
Sbjct: 15 IKPIDRKSVHQICSGQVVLSLSTAVKELVENSVDAGATNIDLRLKDYGVDLIEVSDNGCG 74
Query: 72 ISPNNFK 78
+ NF+
Sbjct: 75 VEEENFE 81
>gi|126334368|ref|XP_001377577.1| PREDICTED: mismatch repair endonuclease PMS2-like [Monodelphis
domestica]
Length = 989
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 106/218 (48%), Positives = 139/218 (63%), Gaps = 15/218 (6%)
Query: 600 AATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVL 659
AA EL + K+ F M++IGQFNLGFII KL++DLFI+DQHA DEKYNFE L TVL
Sbjct: 786 AAEDELRKEISKDMFAEMEIIGQFNLGFIITKLNEDLFIIDQHATDEKYNFEMLQLHTVL 845
Query: 660 NQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITF 719
Q L+ P L+LT E + +++I RKNGF D HA R +L ++P SK TF
Sbjct: 846 QGQRLIMPQTLNLTAVNEAILIENLEIFRKNGFDFIIDEHAPVTERVKLISLPTSKNWTF 905
Query: 720 GVEDVKDLISTLADNQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGR 778
G +D+ ++I L+D G +C PSRVR M ASRACR S+MIG AL +
Sbjct: 906 GPQDIDEMIFMLSDCPG--------------VMCRPSRVRQMFASRACRKSVMIGTALNK 951
Query: 779 NEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKN 816
NEM+K++ H+ ++ PWNCPHGRPTMRH+ L I ++
Sbjct: 952 NEMKKLITHMGEIEHPWNCPHGRPTMRHIASLNIISQD 989
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 137/277 (49%), Gaps = 31/277 (11%)
Query: 79 VRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP 138
+ V + QAY +I+ G+R CTN G+ + ++ T G+S++K+NI VFG L P
Sbjct: 305 TKMVQVLQAYCIISTGIRINCTNQIGQGKRQTIVGTNGNSTIKENIGAVFGQKQLQSLIP 364
Query: 139 V-------AICKS----------DSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPK 181
+IC+ + + GF+S+ G GR+ +RQ+FF+N RP D K
Sbjct: 365 FVQLPPSESICEEFGINCNDALHNLFSISGFVSRSDHGVGRSTTERQFFFINQRPCDPAK 424
Query: 182 VSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQE 241
+S++VNE+Y N QYP ++N V + D+NVTPDKR++ +E +L L+ L
Sbjct: 425 ISRIVNEVYHLYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKFLLAVLKTSLIG 484
Query: 242 IYSPNNASYSVNKVEQLIEPEKSGPSSGAESCMFLEQLSPDGNGCIEILNEQQISKGNTP 301
++ SVN+ L SG + +E+ P+ I + N KG
Sbjct: 485 MFDSGVNKLSVNQKPLL----DSGGNLLKMYSTEMEKTLPEKKNLISLQN-----KGEEK 535
Query: 302 KTVEVDTLHSDALEGLVHSSNENGKGNFTLKAHDDKS 338
+T+ + L +A L H++ ++ + TLK H S
Sbjct: 536 RTLTISRLR-EAF-SLQHTTEQSFQ---TLKTHKQDS 567
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 61/78 (78%), Gaps = 3/78 (3%)
Query: 1 MDVETPTNSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGE 60
+++ET + I+PI++ VH+IC+GQV+ +L++AVKEL+ENS+DAGAT+I++ LKEYG
Sbjct: 130 VNIET---AKAIKPIDRKSVHQICSGQVVLNLATAVKELLENSVDAGATNIDLKLKEYGA 186
Query: 61 EWFQVVDNGCGISPNNFK 78
+ +V DNG G+ NF+
Sbjct: 187 DLIEVSDNGLGVEKENFE 204
>gi|3193224|gb|AAC19245.1| mutL homolog PMS2 [Drosophila melanogaster]
Length = 893
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 112/224 (50%), Positives = 140/224 (62%), Gaps = 16/224 (7%)
Query: 599 AAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTV 658
+A EL R KEDF M++IGQFNLGFII KL+ DLFIVDQHA DEKYNFE L ++T
Sbjct: 677 TSAEAELRREIDKEDFAPMEIIGQFNLGFIIVKLEDDLFIVDQHATDEKYNFETLQRTTQ 736
Query: 659 LNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKIT 718
L Q L P L+LT E+V H+D+ KNGF E D A A + RL P SK+
Sbjct: 737 LEYQRLAVPQNLELTAVNEMVLLNHIDVFEKNGFKFEVDHEAPATKKVRLLGKPHSKRWE 796
Query: 719 FGVEDVKDLISTLADNQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALG 777
FG ED+ +LI L D ++C PSRVRAM ASRACR S+MIG AL
Sbjct: 797 FGKEDIDELIFMLQDA-------------PEGTICRPSRVRAMFASRACRKSVMIGTALS 843
Query: 778 RN-EMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKNIDEN 820
RN M++++ + ++ PWNCPHGRPTMRHL+++ + N DEN
Sbjct: 844 RNTTMRRLITQMGEIEQPWNCPHGRPTMRHLINIAML-INSDEN 886
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 89/183 (48%), Gaps = 40/183 (21%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVK--------------------------SVVLKT--- 114
+ QAY L+ KGVR +C+N T K K SV LK+
Sbjct: 198 ILQAYCLVTKGVRILCSNHTPKGPKLLCYKRMVTRRSWPIYQPYRSTPGRGSVPLKSPFG 257
Query: 115 QGS---SSLKDNIITVFGMNIYNCLEP------VAICKSDSCKVEGFLSKPGQGSGRNLG 165
QG + L+ ++ + G ++ + P V ++EGF+S G+GR+
Sbjct: 258 QGQLTEAELRADLES--GADLADTTSPQISTEDVERLNQADFQLEGFISSCRHGAGRSSR 315
Query: 166 DRQYFFVNDRPVDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFF 225
DRQ+FFVN RP D ++K++NE+Y N +Q P +N I DVN+TPDKR++
Sbjct: 316 DRQFFFVNSRPCDPKNIAKVMNEVYHRYNVQQQPFIYLNIITARSDVDVNLTPDKRQLLI 375
Query: 226 SDE 228
++E
Sbjct: 376 NNE 378
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 53/79 (67%), Gaps = 2/79 (2%)
Query: 2 DVETPTN--SPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYG 59
DV PT S I+ I K VH+IC+GQV+ L+ AVKELVENS+DAGAT +EI LK+ G
Sbjct: 15 DVPPPTTALSGQIKAIGKDTVHKICSGQVVLSLAVAVKELVENSIDAGATLVEIKLKDQG 74
Query: 60 EEWFQVVDNGCGISPNNFK 78
+ +V DNG G+ N +
Sbjct: 75 LQSVEVSDNGSGVEEMNLE 93
>gi|194378162|dbj|BAG57831.1| unnamed protein product [Homo sapiens]
Length = 815
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 116/242 (47%), Positives = 149/242 (61%), Gaps = 23/242 (9%)
Query: 584 ELSQPENEE--RKARAL------AAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQD 635
E Q E E+ RK RA AA EL + K F M++IGQFNLGFII KL++D
Sbjct: 588 EAQQSEGEQNYRKFRAKICPGENQAAEDELRKEISKTMFAEMEIIGQFNLGFIITKLNED 647
Query: 636 LFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLE 695
+FIVDQHA DEKYNFE L Q TVL Q L P L+LT E V +++I RKNGF
Sbjct: 648 IFIVDQHATDEKYNFEMLQQHTVLQGQRLTAPQTLNLTAVNEAVLIENLEIFRKNGFDFV 707
Query: 696 EDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVC-P 754
D +A R +L ++P SK TFG +DV +LI L+D+ G +C P
Sbjct: 708 IDENAPVTERAKLISLPTSKNWTFGPQDVDELIFMLSDSPG--------------VMCRP 753
Query: 755 SRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIR 814
SRV+ M ASRACR S+MIG AL +EM+K++ H+ +++ PWNCPHGRPTMRH+ +L I
Sbjct: 754 SRVKQMFASRACRKSVMIGTALNTSEMKKLITHMGEMDHPWNCPHGRPTMRHIANLGVIS 813
Query: 815 KN 816
+N
Sbjct: 814 QN 815
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/181 (37%), Positives = 100/181 (55%), Gaps = 17/181 (9%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP- 138
+ V + AY +I+ G+R CTN G+ + V+ T GS S+K+NI +VFG L P
Sbjct: 136 KMVQVLHAYCIISAGIRVSCTNQLGQGKRQPVVCTGGSPSIKENIGSVFGQKQLQSLIPF 195
Query: 139 VAICKSDS-CK---------------VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKV 182
V + SDS C+ + GF+S+ G GR+ DRQ+FF+N RP D KV
Sbjct: 196 VQLPPSDSVCEEYGLSCSDALHNLFYISGFISQCTHGVGRSSTDRQFFFINRRPCDPAKV 255
Query: 183 SKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEI 242
+LVNE+Y N QYP ++N V + D+NVTPDKR++ +E +L L+ L +
Sbjct: 256 CRLVNEVYHMYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLIGM 315
Query: 243 Y 243
+
Sbjct: 316 F 316
>gi|340379225|ref|XP_003388127.1| PREDICTED: mismatch repair endonuclease PMS2-like [Amphimedon
queenslandica]
Length = 759
Score = 213 bits (543), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 109/234 (46%), Positives = 141/234 (60%), Gaps = 22/234 (9%)
Query: 589 ENEERKARALAA---------ATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIV 639
E +E K R A A EL+R KE F M+++GQFNLGFII KLD DLFI+
Sbjct: 536 ERDESKRRYFHAKIRPDSNQDAEEELKRELNKEQFKEMEILGQFNLGFIIAKLDNDLFII 595
Query: 640 DQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPH 699
DQHA DEKYNFERL + TVL Q L+ PL +++T E V ++++ KNGF D
Sbjct: 596 DQHATDEKYNFERLKRDTVLEHQSLIHPLPVEVTAVGESVIKDNLEVFEKNGFRFSFDEE 655
Query: 700 ALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRA 759
A R +L P SK + G ++++LI L D GE V P V
Sbjct: 656 APPTKRVKLIEQPVSKNWSMGTSEIEELIFLLTDYPGEM-------------VRPHCVTK 702
Query: 760 MLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTI 813
MLASRACR SIMIG ALG+ EM KI+ H+A+++ PWNCPHGRPT+RHL+D++ +
Sbjct: 703 MLASRACRGSIMIGTALGKKEMSKIVAHMAEMDQPWNCPHGRPTIRHLIDISKL 756
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 97/191 (50%), Gaps = 25/191 (13%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNC---- 135
R + + Q Y +I+K V+ C N TGK + +VL G S + NI VFG ++
Sbjct: 172 RMIQMLQGYCIISKQVKVTCYNQTGKIKRQLVLSNSGGSEIISNISCVFGPKQWSAHLIF 231
Query: 136 ---------LEPVAICKSDSC------------KVEGFLSKPGQGSGRNLGDRQYFFVND 174
+ S+S ++ GF+SK GSGR+ DRQ+FF+N
Sbjct: 232 LLLMMRELIIMSYTANSSESMIYILINIVFALFRLSGFVSKCEHGSGRSSTDRQFFFING 291
Query: 175 RPVDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHA 234
RP D K+SK VNE+Y N QYP ++N + DVNVTPDKR+V +E ++L
Sbjct: 292 RPCDHSKLSKTVNEVYHMFNPHQYPFIVLNISTQRESVDVNVTPDKRQVMLQEEKALLFF 351
Query: 235 LREGLQEIYSP 245
L+ L E++ P
Sbjct: 352 LKASLLEMFKP 362
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 55/68 (80%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
+++ I+K VHRIC+GQV+ L+ AVKELVENS+DAGATSIE+ LKE+G E +V DNG
Sbjct: 3 SLQRIDKESVHRICSGQVVLSLAVAVKELVENSIDAGATSIEVRLKEFGSEVVEVADNGS 62
Query: 71 GISPNNFK 78
G+ P+N++
Sbjct: 63 GVHPDNYQ 70
>gi|281205683|gb|EFA79872.1| MutL DNA mismatch repair protein [Polysphondylium pallidum PN500]
Length = 945
Score = 213 bits (543), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 105/237 (44%), Positives = 149/237 (62%), Gaps = 11/237 (4%)
Query: 575 RRCFAAATLELS-QPENEERKARALAAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLD 633
+ CF + E + + ++ + A +EL R F+KE F M +IGQFN GFII +L
Sbjct: 651 KHCFKSTVSEFPPRKKKDDTTGYNDSNAQSELTRFFKKEYFKDMSIIGQFNKGFIITRLG 710
Query: 634 QDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFS 693
DLFI+DQHAADEKYN+E L +S V++ QP ++P+ +LT ++E + H+ I +KNGF
Sbjct: 711 MDLFIIDQHAADEKYNYESLQKSHVISSQPYIKPISFNLTVDDESIIIDHISIFKKNGFE 770
Query: 694 LEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVC 753
+ D A + +L A P S K FG +DV +LI+ + D M +++
Sbjct: 771 FQIDEAAPPKYKVKLTAFPHSNKTEFGPDDVYELITLIKDQ----------AMIGLENIR 820
Query: 754 PSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
SRV AM ASRACR SIM+G +L EM+KIL++L+ L++PW CPHGRPTMRHL+DL
Sbjct: 821 LSRVSAMFASRACRKSIMVGTSLTVPEMKKILDNLSTLDNPWCCPHGRPTMRHLLDL 877
Score = 112 bits (281), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 99/185 (53%), Gaps = 16/185 (8%)
Query: 83 FLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAIC 142
+ Q YA+I+ GVR V + K ++ VL T+G SL+DN+ VFG L+ A
Sbjct: 227 LVLQTYAVISVGVRLVVYHQPSKGPRTPVLSTEGKPSLRDNVSAVFGGKTSAVLDSFA-A 285
Query: 143 KSDSCKVEGFLSKPGQGSG--------------RNLGDRQYFFVNDRPVDLPKVSKLVNE 188
++ VEG +SK G G RN GDRQ+ ++N RP+++ ++K++N
Sbjct: 286 SDETFTVEGLISKVGANGGAGSSVNSASGNSASRNSGDRQFVYLNKRPIEMNTLTKVING 345
Query: 189 LYKGANSR-QYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNN 247
LY+ + YP+ +N I DVNVTPDKRKVF E +++ +++ L+ +
Sbjct: 346 LYQTFCKKGSYPMIFLNVIADPTTYDVNVTPDKRKVFLQKELQLVNLVKDKLKSTWESAQ 405
Query: 248 ASYSV 252
+S+ +
Sbjct: 406 SSFDI 410
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/66 (68%), Positives = 52/66 (78%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I I+K VH IC+GQVI DLS A KELVENSLDAGAT IE+ LKEYGEE +V+DNG G
Sbjct: 56 IAAIDKESVHLICSGQVIFDLSVATKELVENSLDAGATKIEVRLKEYGEESIEVIDNGSG 115
Query: 72 ISPNNF 77
+ P+NF
Sbjct: 116 VEPHNF 121
>gi|260801094|ref|XP_002595431.1| hypothetical protein BRAFLDRAFT_69263 [Branchiostoma floridae]
gi|229280677|gb|EEN51443.1| hypothetical protein BRAFLDRAFT_69263 [Branchiostoma floridae]
Length = 219
Score = 213 bits (543), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 108/215 (50%), Positives = 137/215 (63%), Gaps = 15/215 (6%)
Query: 600 AATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVL 659
AA EL R K+ F +M+++GQFNLGFII +L DLFI+DQHA DEKYNFE L ++TVL
Sbjct: 17 AAEDELRREISKDKFTQMEILGQFNLGFIIARLGGDLFIIDQHATDEKYNFEMLQRNTVL 76
Query: 660 NQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITF 719
Q L++P L LT E + +MDI RKNGF A R +L ++P SK TF
Sbjct: 77 QGQRLIQPQSLHLTAANESILMDNMDIFRKNGFEFTIQEDAPCTERVKLVSMPVSKNWTF 136
Query: 720 GVEDVKDLISTLADNQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGR 778
G ED+++LI L+D G +C PSRVR M ASRACR S+MIG AL R
Sbjct: 137 GKEDIEELIFMLSDAPG--------------VMCRPSRVRQMFASRACRKSVMIGTALNR 182
Query: 779 NEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTI 813
EMQ++L H+ ++ PWNCPHGRPTMRHL +L +
Sbjct: 183 GEMQQLLTHMGEIEQPWNCPHGRPTMRHLFNLNML 217
>gi|195455398|ref|XP_002074706.1| GK23208 [Drosophila willistoni]
gi|194170791|gb|EDW85692.1| GK23208 [Drosophila willistoni]
Length = 875
Score = 213 bits (542), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 132/335 (39%), Positives = 188/335 (56%), Gaps = 34/335 (10%)
Query: 484 EELVTQEKATPLLNVPSIVS--SSNDLKKNSEDLSVAASHLQFSGSILDAPVPSSSLDIC 541
+ELV E PL + P+ +S SS + ED ++F G+ D +S+L++C
Sbjct: 557 KELVQPE--NPLKSKPNEISTDSSKAVDDQDEDHIEMPKRIEFDGNSADED-ETSALNVC 613
Query: 542 S-TLQFSIQDLRKRRQQRLSIMQSSCHTSGSVKMRRCFAAATLELSQPENEERKARALAA 600
S L S++++ R + + + QS+ ++ R E++ +N
Sbjct: 614 SGELCTSLEEIAARLKAQ-ELRQSTNRARAKLQRLRF----KTEINPTQN--------VK 660
Query: 601 ATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLN 660
A EL++ KEDF RM++IGQFNLGFII KL+ DLFIVDQHAADEKYNFE L + T L
Sbjct: 661 AEAELQKEIAKEDFARMEIIGQFNLGFIIVKLEDDLFIVDQHAADEKYNFETLQKCTQLE 720
Query: 661 QQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFG 720
Q L P L+LT E+V H+ + KNGF + D A A + RL P+S+ FG
Sbjct: 721 YQRLAVPQPLELTAINEMVLMDHLPVFEKNGFKFQIDAEAPATKKVRLLGKPYSRNWEFG 780
Query: 721 VEDVKDLISTLADNQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGR- 778
ED+ +LI L D ++C PSR+RAM ASRACR S+MIG AL R
Sbjct: 781 KEDIDELIFMLQDA-------------PEGTICRPSRIRAMFASRACRKSVMIGKALNRK 827
Query: 779 NEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTI 813
M++++ + ++ PWNCPHGRPTMRHL+++T +
Sbjct: 828 TTMKRLITQMGEIEQPWNCPHGRPTMRHLINVTML 862
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 105/203 (51%), Gaps = 34/203 (16%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGM------------- 130
+ QAY L++KGVR +C+N T K VKSVVL+T G + NI VFG
Sbjct: 190 ILQAYCLVSKGVRLICSNQTAKGVKSVVLQTHGVDDVLANISAVFGQRQAADLVTLKSPF 249
Query: 131 --------NIYNCLEP-------------VAICKSDSCKVEGFLSKPGQGSGRNLGDRQY 169
++ N LE V + ++EGF+S G+GR+ DRQ+
Sbjct: 250 EKGELSEADLRNELESSGDTTTTQFTAQDVEQLNRNEFQLEGFISSCRHGAGRSTRDRQF 309
Query: 170 FFVNDRPVDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDEC 229
FFVN RP D +SK++N++Y N++Q P +N + DVN+TPDKR++ ++E
Sbjct: 310 FFVNSRPCDPKNISKVMNDVYHRFNAQQQPFIYLNVVTARADVDVNLTPDKRQLLLNNEK 369
Query: 230 SILHALREGLQEIYSPNNASYSV 252
++ AL++ L + +++ +
Sbjct: 370 ILILALKKSLLNTFGSMPSTFQM 392
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 54/76 (71%), Gaps = 2/76 (2%)
Query: 6 PTNSPT--IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWF 63
PT++P+ I+ I K VH+IC+GQV+ L+ AVKELVENS+DAGAT +EI LK+ G +
Sbjct: 10 PTSAPSGEIKAIAKDTVHKICSGQVVLSLAVAVKELVENSIDAGATLVEIRLKDQGLQGV 69
Query: 64 QVVDNGCGISPNNFKV 79
+V DNG G+ N +
Sbjct: 70 EVSDNGSGVEETNLEA 85
>gi|328708648|ref|XP_003243755.1| PREDICTED: mismatch repair endonuclease PMS2-like [Acyrthosiphon
pisum]
Length = 591
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 107/245 (43%), Positives = 145/245 (59%), Gaps = 23/245 (9%)
Query: 581 ATLELSQPENEERKARALAA--------ATTELERLFRKEDFGRMKVIGQFNLGFIIGKL 632
+ L + E ++ K R A A EL R K+ F RM +IGQFNLGFII KL
Sbjct: 359 SNLRFRRSEKQKIKTRFYATIDPIKNQQAEVELSREISKDMFSRMSIIGQFNLGFIITKL 418
Query: 633 DQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGF 692
D DLFIVDQHA DEKYNFE L +T + Q L+ P +L+LT E+V ++++ + NGF
Sbjct: 419 DADLFIVDQHATDEKYNFETLQNTTKITSQKLVVPQQLELTAVNEIVLMENINVFQMNGF 478
Query: 693 SLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSV 752
+ A + +L +P S +FG EDV +L+ L D +++
Sbjct: 479 DFQFQQDAEPTKKVKLTMIPMSNNWSFGKEDVDELLFML--------------QDAPNTL 524
Query: 753 C-PSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLT 811
C PSRVR+M ASRACR S+MIG L +M+K+++H+ D+ PWNCPHGRPTMRHLV+LT
Sbjct: 525 CRPSRVRSMFASRACRKSVMIGKVLNFGDMRKLIDHMGDIEQPWNCPHGRPTMRHLVNLT 584
Query: 812 TIRKN 816
+ N
Sbjct: 585 LLNVN 589
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 12/99 (12%)
Query: 155 KPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDV 214
K Q S R + +R+ +V K VNE+Y N QYP +N + D+
Sbjct: 33 KKNQSSYRMMSNRK------------QVIKTVNEVYHQYNQNQYPFVYLNITIARAEVDI 80
Query: 215 NVTPDKRKVFFSDECSILHALREGLQEIYSPNNASYSVN 253
NVTPDKR++F S+E ++ ++ L ++ ++Y +N
Sbjct: 81 NVTPDKRQIFLSNENYLVSIIKASLNRLFENIPSTYKIN 119
>gi|195384627|ref|XP_002051016.1| GJ19872 [Drosophila virilis]
gi|194145813|gb|EDW62209.1| GJ19872 [Drosophila virilis]
Length = 886
Score = 212 bits (540), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 128/328 (39%), Positives = 177/328 (53%), Gaps = 34/328 (10%)
Query: 490 EKATPLLNVPSIVSSSNDLKKNSEDLSVAASHLQFSGS--ILDAPVPSSSLDICSTLQFS 547
E+ TP + +SS + S+D + ++ G+ AP +S ++C+TL
Sbjct: 572 EEHTPAAQPDAASTSSQTTIEYSDDDIEMPTRIELDGNSDTETAPANIASGELCTTLDQI 631
Query: 548 IQDLRKRRQQRLSIMQSSCHTSGSVKMRRCFAAATLELSQPENEERKARALAAATTELER 607
LR + Q K++R + + SQ +N E EL++
Sbjct: 632 ASSLR-------AQEQQREERRRCAKLQRLRFKSEINPSQNQNAE----------AELQK 674
Query: 608 LFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRP 667
K DF RM++IGQFNLGFII KLD DLFIVDQHAADEKYNFE L ++T L Q L P
Sbjct: 675 EITKADFERMQIIGQFNLGFIIVKLDDDLFIVDQHAADEKYNFETLQRNTQLEHQRLTVP 734
Query: 668 LKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDL 727
L+LT E++ H+ + KNGF E + A A + RL PFSK FG ED+ +L
Sbjct: 735 QTLELTAVNEMILQDHLPVFEKNGFKFEINADAPATKKVRLLGKPFSKNWEFGKEDIDEL 794
Query: 728 ISTLADNQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGR-NEMQKIL 785
I L D ++C PSR+RAM ASRACR S+MIG AL R M++++
Sbjct: 795 IFMLQDA-------------PEGTICRPSRIRAMFASRACRKSVMIGKALHRTTTMRRLI 841
Query: 786 EHLADLNSPWNCPHGRPTMRHLVDLTTI 813
+ ++ PWNCPHGRPTMRHL+++T +
Sbjct: 842 TQMGEIEQPWNCPHGRPTMRHLINVTML 869
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 91/182 (50%), Gaps = 37/182 (20%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP----- 138
+ QAY L+ +GVR +C+N T K VKSV+L+T G+ + NI +FG+ L P
Sbjct: 193 ILQAYCLVTRGVRIICSNQTPKGVKSVLLQTHGAQDVLANISAIFGVRQVADLVPLKSPF 252
Query: 139 -------------------------VAICKSD-------SCKVEGFLSKPGQGSGRNLGD 166
+A D ++EG++S G+GR+ D
Sbjct: 253 EAGEISEERLRAELQSASDTAETTCIAFGAEDVERLNQAGFQLEGYISSCRHGAGRSTRD 312
Query: 167 RQYFFVNDRPVDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFS 226
RQ+FFVN RP + ++K++N++Y N +Q P +N + DVN+TPDKR++ +
Sbjct: 313 RQFFFVNARPCEPKNIAKVMNDVYHRYNVQQQPFIYLNIVTSRAEVDVNLTPDKRQLLLN 372
Query: 227 DE 228
+E
Sbjct: 373 NE 374
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 49/73 (67%)
Query: 5 TPTNSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQ 64
T S I+ I K VH+IC+GQV+ L+ A+KELVENS+DAGAT IE+ LK+ G + +
Sbjct: 14 TSAESGQIKAIAKDTVHKICSGQVVLSLAVAIKELVENSIDAGATLIEVKLKDQGLQGVE 73
Query: 65 VVDNGCGISPNNF 77
V DNG G+ N
Sbjct: 74 VCDNGSGVEEANL 86
>gi|403285983|ref|XP_003934288.1| PREDICTED: mismatch repair endonuclease PMS2 [Saimiri boliviensis
boliviensis]
Length = 862
Score = 212 bits (540), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 111/238 (46%), Positives = 147/238 (61%), Gaps = 21/238 (8%)
Query: 586 SQPENEERKARAL------AAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIV 639
S+ E RK RA AA EL + K F M++IGQFNLGFII KL++D+FIV
Sbjct: 639 SEGEQNYRKFRAKICPGENQAAEDELRKEISKSMFAEMEIIGQFNLGFIITKLNEDIFIV 698
Query: 640 DQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPH 699
DQHA DEKYNFE L Q T+L Q L+ P L+LT E + +++I RKNGF D
Sbjct: 699 DQHATDEKYNFEMLQQHTMLQGQRLIAPQTLNLTAVNETILIENLEIFRKNGFDFVIDES 758
Query: 700 ALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVC-PSRVR 758
A R +L ++P SK TFG +D+ +LI L+D+ G +C PSRV+
Sbjct: 759 APVTQRAKLISLPTSKNWTFGPQDIDELIFMLSDSPG--------------VMCRPSRVK 804
Query: 759 AMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKN 816
M ASRACR S+MIG AL +EM+K++ H+ +++ PWNCPHGRPTMRH+ +L I +N
Sbjct: 805 QMFASRACRKSVMIGTALNPSEMKKLITHMGEMDHPWNCPHGRPTMRHIANLGVISQN 862
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 68/181 (37%), Positives = 100/181 (55%), Gaps = 17/181 (9%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
+ V + AY +I+ G+R CTN G+ + V+ T GS S+K+NI +VFG L P
Sbjct: 183 KMVQVLHAYCIISAGIRISCTNQLGQGKRQPVVCTGGSPSIKENIGSVFGQKQLQSLIPF 242
Query: 140 -------AICK------SDSCK----VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKV 182
++C+ SDS + GF+S+ G GR+ DRQ+FF+N RP D KV
Sbjct: 243 VQLPPSDSVCEEYGLSCSDSLHNLFYISGFISQCAHGVGRSSTDRQFFFINRRPCDPAKV 302
Query: 183 SKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEI 242
S+LVNE+Y N QYP ++N V D+NVTPDKR++ +E +L L+ L +
Sbjct: 303 SRLVNEVYHMYNRNQYPFVVLNISVDAECVDINVTPDKRQILLQEEKLLLAVLKTSLVGM 362
Query: 243 Y 243
+
Sbjct: 363 F 363
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 55/67 (82%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IRPI++ VH+IC+GQV+ LS+AVKELVENSLDAGAT+I++ LK+YG + +V DNGCG
Sbjct: 15 IRPIDRKSVHQICSGQVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSDNGCG 74
Query: 72 ISPNNFK 78
+ NF+
Sbjct: 75 VEEENFE 81
>gi|348568586|ref|XP_003470079.1| PREDICTED: mismatch repair endonuclease PMS2-like [Cavia porcellus]
Length = 861
Score = 212 bits (540), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 110/235 (46%), Positives = 145/235 (61%), Gaps = 21/235 (8%)
Query: 589 ENEERKARAL------AAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQH 642
E RK RA AA EL + K F M+++GQFNLGFI+ KL +D+F+VDQH
Sbjct: 641 EQNYRKFRAKICPGENQAAEDELRKEISKTMFAEMEILGQFNLGFIVTKLKEDIFLVDQH 700
Query: 643 AADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALA 702
AADEKYNFE L Q TVL Q L+ P L+LT E + +++I RKNGF D A
Sbjct: 701 AADEKYNFEMLQQHTVLQAQRLISPQTLNLTAVNEAILIENLEIFRKNGFDFVIDESAPV 760
Query: 703 GLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVC-PSRVRAML 761
R +L ++P SK TFG +D+ +LI L+D+ G +C PSRVR M
Sbjct: 761 TKRAKLISLPTSKNWTFGPQDIDELIFMLSDSPG--------------VMCRPSRVRQMF 806
Query: 762 ASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKN 816
ASRACR S+MIG AL +EM+K++ H+ +++ PWNCPHGRPTMRH+ +L I +N
Sbjct: 807 ASRACRKSVMIGTALNTSEMKKLIVHMGEMDHPWNCPHGRPTMRHIANLEVISQN 861
Score = 129 bits (324), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 102/181 (56%), Gaps = 17/181 (9%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
+ V + AY +I+ GVR CTN G+ + V+ T GS+SLKDNI +VFG L P
Sbjct: 183 KMVQVLHAYCIISAGVRVSCTNQLGQGKRQPVVCTSGSTSLKDNIGSVFGQKQLQNLIPF 242
Query: 140 -------AICK------SDSCK----VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKV 182
++C+ SD+ + + GF+S G GR+ DRQ+FF+N RP D KV
Sbjct: 243 VQLPPSDSVCEEFGLSCSDALRSLFHISGFISPGTHGVGRSATDRQFFFINRRPCDPAKV 302
Query: 183 SKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEI 242
S+LVNE+Y N QYP ++N V + D+NVTPDKR++ +E +L L+ L +
Sbjct: 303 SRLVNEVYHMYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAILKTSLIGM 362
Query: 243 Y 243
+
Sbjct: 363 F 363
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 60/82 (73%), Gaps = 2/82 (2%)
Query: 3 VETPTNSPT--IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGE 60
VE+ + P I+ I+ VH+IC+GQV+ LS+AVKELVENS+DAGAT+I++ LK+YG
Sbjct: 4 VESTSTEPAKAIKAIDGKSVHQICSGQVVLSLSTAVKELVENSVDAGATNIDLRLKDYGV 63
Query: 61 EWFQVVDNGCGISPNNFKVRAV 82
+ +V DNGCG+ NF+ A+
Sbjct: 64 DLIEVSDNGCGVEEENFEGLAL 85
>gi|431918187|gb|ELK17415.1| Mismatch repair endonuclease PMS2 [Pteropus alecto]
Length = 946
Score = 212 bits (540), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 108/218 (49%), Positives = 138/218 (63%), Gaps = 15/218 (6%)
Query: 600 AATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVL 659
AA EL + K F M++IGQFNLGFII KLD D+FIVDQHA DEKYNFE L Q TVL
Sbjct: 743 AAEDELRKEISKTMFAEMEIIGQFNLGFIITKLDADIFIVDQHATDEKYNFEMLQQHTVL 802
Query: 660 NQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITF 719
Q L+ P L+LT E + +++I RKNGF D A R +L ++P SK TF
Sbjct: 803 QGQRLIAPQILNLTAVNEAILIENLEIFRKNGFDFIIDESAPVTERAKLVSLPTSKNWTF 862
Query: 720 GVEDVKDLISTLADNQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGR 778
G +D+ +LI L+D+ G +C PSRVR M ASRACR S+MIG AL
Sbjct: 863 GPQDIDELIFMLSDSPG--------------VMCRPSRVRQMFASRACRKSVMIGTALNT 908
Query: 779 NEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKN 816
EM+K++ H+ +++ PWNCPHGRPTMRH+ +L I +N
Sbjct: 909 GEMKKLITHMGEMDHPWNCPHGRPTMRHIANLDVISQN 946
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/182 (38%), Positives = 101/182 (55%), Gaps = 17/182 (9%)
Query: 79 VRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP 138
R V + AY +I+ GVR CTN + + +V+ T GSSS+K+NI +VFG L P
Sbjct: 264 ARMVQVFHAYCIISVGVRVSCTNQVAQGKRQLVVGTSGSSSIKENIGSVFGQKQLQSLIP 323
Query: 139 V-------AICK------SDSCK----VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPK 181
++C+ SDS + GF+S G GR+ DRQ+FF+N RP D K
Sbjct: 324 FVQLPPSDSVCEEFGLSCSDSLHNLFCISGFISHCTHGVGRSSTDRQFFFINRRPCDPAK 383
Query: 182 VSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQE 241
VS+LVNE+Y N QYP ++N V + D+NVTPDKR++ +E +L L+ L
Sbjct: 384 VSRLVNEVYHTYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAILKTSLIG 443
Query: 242 IY 243
++
Sbjct: 444 MF 445
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 55/68 (80%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
+I+PI+ +H+IC+GQV+ LSSAVKEL+ENS+DAGATSI++ LK++G + +V DNGC
Sbjct: 119 SIKPIDGRSIHQICSGQVVLSLSSAVKELIENSVDAGATSIDLRLKDFGVDLIEVSDNGC 178
Query: 71 GISPNNFK 78
G+ NF+
Sbjct: 179 GVEEENFE 186
>gi|296192534|ref|XP_002806632.1| PREDICTED: LOW QUALITY PROTEIN: mismatch repair endonuclease PMS2
[Callithrix jacchus]
Length = 1052
Score = 212 bits (539), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 127/317 (40%), Positives = 179/317 (56%), Gaps = 39/317 (12%)
Query: 501 IVSSSNDLKKNSEDLSVAASHLQFSGSILDAPVPSSSLDICSTLQFSIQDLRKRRQQRLS 560
I+S+S+ +K +V+AS + + I VP L FS+ L KR +Q
Sbjct: 774 ILSNSDIRQKLVNTQNVSASQVDVAVKIDKKVVP---------LDFSMSSLTKRMKQ--- 821
Query: 561 IMQSSCHTSGSVKMRRCFAAATLELSQPENEERKARALAAATTELERLFRKEDFGRMKVI 620
+ + G R+ A ++ EN+ AA EL + K F M++I
Sbjct: 822 FHHKAKQSEGEQNYRKFRA----KICPGENQ--------AAEDELRKEISKSMFAEMEII 869
Query: 621 GQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVA 680
GQFNLGFII KL++D+FIVDQHA DEKYNFE L Q TVL Q L+ P L+LT E++
Sbjct: 870 GQFNLGFIITKLNEDIFIVDQHATDEKYNFEMLQQHTVLQGQRLIVPQTLNLTAVNEIIL 929
Query: 681 SMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSI 740
+++I RKNGF D A + +L ++P SK TFG +D+ +LI L+D+ G
Sbjct: 930 IENLEIFRKNGFDFVIDESAPVTQKAKLISLPTSKNWTFGPQDIDELIFMLSDSPG---- 985
Query: 741 ISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPH 799
+C PSRV+ M ASRACR S+MIG AL +EM+K++ H+ +++ PWNCPH
Sbjct: 986 ----------VMCRPSRVKQMFASRACRKSVMIGTALNPSEMKKLITHMGEMDHPWNCPH 1035
Query: 800 GRPTMRHLVDLTTIRKN 816
GRPTMRH+ +L I +N
Sbjct: 1036 GRPTMRHIANLGVISQN 1052
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 100/182 (54%), Gaps = 17/182 (9%)
Query: 79 VRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP 138
+ V + AY +I+ G+R CTN G+ + V+ T GS S+K+NI +VFG L P
Sbjct: 372 AKMVQVLHAYCIISSGIRVSCTNQLGQGKRQPVVCTGGSPSIKENIGSVFGQKQLQSLIP 431
Query: 139 -VAICKSDS-CK---------------VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPK 181
V + SDS C+ + GF+S+ G GR+ DRQ+FF+N RP D K
Sbjct: 432 FVQLPPSDSVCEEYGLSCSDALHNLFYISGFISQCAHGVGRSSTDRQFFFINRRPCDPAK 491
Query: 182 VSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQE 241
VS+LVNE+Y N QYP ++N V D+NVTPDKR++ +E +L L+ L
Sbjct: 492 VSRLVNEVYHMYNRNQYPFVVLNISVDAECVDINVTPDKRQILLQEEKLLLAVLKTSLIG 551
Query: 242 IY 243
++
Sbjct: 552 MF 553
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 55/67 (82%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IRPI++ VH+IC+GQV+ LS+AVKELVENSLDAGAT+I++ LK+YG + +V DNGCG
Sbjct: 205 IRPIDRKSVHQICSGQVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSDNGCG 264
Query: 72 ISPNNFK 78
+ NF+
Sbjct: 265 VEEENFE 271
>gi|344289677|ref|XP_003416568.1| PREDICTED: mismatch repair endonuclease PMS2 [Loxodonta africana]
Length = 870
Score = 212 bits (539), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 107/218 (49%), Positives = 138/218 (63%), Gaps = 15/218 (6%)
Query: 600 AATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVL 659
AA EL + K F M++IGQFNLGFII KL+ D+FIVDQHA DEKYNFE L Q TVL
Sbjct: 667 AAEDELRKEISKTMFAEMEIIGQFNLGFIITKLNADIFIVDQHATDEKYNFEMLQQHTVL 726
Query: 660 NQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITF 719
Q L+ P L+LT E V +++I RKNGF D A R +L ++P SK TF
Sbjct: 727 QGQKLIIPQTLNLTAVNEAVLIENLEIFRKNGFDFLIDEDAPVTERVKLISLPTSKNWTF 786
Query: 720 GVEDVKDLISTLADNQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGR 778
G +D+ +LI L+D G +C PSRVR M ASRACR S+MIG AL
Sbjct: 787 GPQDIDELIFMLSDCPG--------------VMCRPSRVRQMFASRACRKSVMIGTALNT 832
Query: 779 NEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKN 816
+EM+K++ H+ +++ PWNCPHGRPTMRH+ +L + +N
Sbjct: 833 SEMKKLITHMGEMDHPWNCPHGRPTMRHIANLDVVSQN 870
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 101/181 (55%), Gaps = 17/181 (9%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP- 138
+ + + AY +I+ GVR CTN G+ + V+ T G+S++K+NI +VFG L P
Sbjct: 183 KMIQVLHAYCIISTGVRLSCTNQIGQGKRQPVVCTSGNSNIKENIGSVFGQKQLQSLIPF 242
Query: 139 VAICKSDS-CK---------------VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKV 182
V + S+S C+ + GF+S G GR+ DRQ+FF+N RP D KV
Sbjct: 243 VQLPPSESVCEEYGLHSSEALQNLFCISGFISHCTHGVGRSSTDRQFFFINRRPCDPAKV 302
Query: 183 SKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEI 242
S+LVNE+Y N QYP ++N V + D+NVTPDKR++ +E +L L+ L +
Sbjct: 303 SRLVNEVYHMYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLVGM 362
Query: 243 Y 243
+
Sbjct: 363 F 363
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 55/67 (82%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+PI++ VH+IC+GQV+ LS+AVKELVENS+DAGAT+IE+ LK+YG + +V DNGCG
Sbjct: 15 IKPIDRKSVHQICSGQVVLSLSTAVKELVENSVDAGATNIELRLKDYGADLIEVSDNGCG 74
Query: 72 ISPNNFK 78
+ NF+
Sbjct: 75 VEEENFE 81
>gi|167525904|ref|XP_001747286.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774121|gb|EDQ87753.1| predicted protein [Monosiga brevicollis MX1]
Length = 871
Score = 211 bits (538), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 104/207 (50%), Positives = 138/207 (66%), Gaps = 13/207 (6%)
Query: 607 RLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLR 666
R KEDF RM++IGQFNLGFII +L +DLFI+DQHA DEKYNFERLS+ST + QQ L++
Sbjct: 664 RQISKEDFLRMRIIGQFNLGFIIARLGRDLFIIDQHATDEKYNFERLSKSTKIQQQRLIQ 723
Query: 667 PLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKD 726
L L +E+ H +I ++NGF D A + +L A+P SK + FG ED+++
Sbjct: 724 GKALRLPAVQEMTLIDHEEIFKQNGFEFVVDEGAPPTKKVKLTAIPHSKHVEFGQEDIEE 783
Query: 727 LISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILE 786
+++ L + G V PSR+RAMLASRACRSSIM+G AL EM ++++
Sbjct: 784 MLALLLERPGVF-------------VQPSRLRAMLASRACRSSIMVGKALKVAEMAEVVQ 830
Query: 787 HLADLNSPWNCPHGRPTMRHLVDLTTI 813
H++ L PWNCPHGRPTMRHLV+L I
Sbjct: 831 HMSQLEHPWNCPHGRPTMRHLVNLDRI 857
Score = 102 bits (255), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 106/215 (49%), Gaps = 24/215 (11%)
Query: 80 RAVFLCQAYALIAKGVRFVCTN--TTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLE 137
+ V + QAY ++ + F T+ G N +S +++T G S+L+ + +FG + L
Sbjct: 173 KLVQMLQAYCMVRPDIAFRLTHIPNAGSNRQSDLVRTNGDSTLEAVLRHIFGKKQLDALV 232
Query: 138 P-VAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSR 196
P A ++GF+SKP G G++ DRQ+ +N RP +L KV++ VN+ + N
Sbjct: 233 PFTADVAETEWSIKGFVSKPLPGCGKSASDRQFISINKRPCNLTKVARAVNDAFHTLNKA 292
Query: 197 QYPIAIMNFIV-------------------PTRACDVNVTPDKRKVFFSDECSILHALRE 237
QYP +++ + PT++ DVNVTPDKR + E + A+R
Sbjct: 293 QYPFLVLDITLHAAAKVFGIFDELFSPPQMPTQSVDVNVTPDKRTILVQRENQLSDAIRA 352
Query: 238 GLQEIYSPNNASYSVNKVEQLIEPEKSGPSSGAES 272
+ ++ P Y +N EQL PS+ A++
Sbjct: 353 HMLTVFEPFAGHYGLN--EQLAFLPDVPPSATAKT 385
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 50/68 (73%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
++R ++ G VHRIC+GQV+ L+ AVKEL+EN+ DA AT I+I ++EYG+ +V DNG
Sbjct: 4 SVRALDAGSVHRICSGQVVLSLAIAVKELLENAADAHATKIDIKIREYGKTLIEVTDNGS 63
Query: 71 GISPNNFK 78
G+ NF+
Sbjct: 64 GVHQENFE 71
>gi|327285948|ref|XP_003227693.1| PREDICTED: mismatch repair endonuclease PMS2-like [Anolis
carolinensis]
Length = 842
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 119/296 (40%), Positives = 167/296 (56%), Gaps = 30/296 (10%)
Query: 522 LQFSGSILDAPVPSSSLDICSTLQFSIQDLRKRRQQRLSIMQSSCHTSGSVKMRRCFAAA 581
LQ S + +P L+FS+ LR R ++ + + + T K R
Sbjct: 576 LQMSALLSQCDIPVEIARRTVPLEFSLSVLRDRVKKLMGQQEKTADTLHYRKFR------ 629
Query: 582 TLELSQPENEERKARALAAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQ 641
+++ EN+ A EL + KE F +M +IGQFNLGFI+ KL+ DLFIVDQ
Sbjct: 630 -AKINPGENK--------TAEDELRKEISKEMFAKMDIIGQFNLGFIVAKLNSDLFIVDQ 680
Query: 642 HAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHAL 701
HA+DEKYNFE+L + TVL Q L+ P L+LT E V +++I RKNGF + A
Sbjct: 681 HASDEKYNFEQLQEHTVLQGQRLISPQNLNLTAINESVLIENLEIFRKNGFDFVINEDAP 740
Query: 702 AGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVC-PSRVRAM 760
R +L ++P SK TFG +D+ +LI L+D+ G +C PSRVR M
Sbjct: 741 VTQRVQLISLPMSKNWTFGPQDIDELIFMLSDSPG--------------VMCRPSRVRQM 786
Query: 761 LASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKN 816
ASRACR S+M+G AL EM+K++ H+ ++ PWNCPHGRPT+RHL +L I ++
Sbjct: 787 FASRACRKSVMVGTALNAKEMKKLITHMGEIEHPWNCPHGRPTIRHLANLDLISQD 842
Score = 132 bits (331), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 77/216 (35%), Positives = 118/216 (54%), Gaps = 28/216 (12%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
+ V + QAY +++ GVR CTN G+ K V+ T G+S++K+NI +FG L P
Sbjct: 178 KMVQVLQAYCIVSTGVRITCTNQVGQGKKQPVVCTNGNSTVKENIGAIFGQKQVQSLIPF 237
Query: 140 -------AICKSDSCK----------VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKV 182
AIC+ + GF+S+ G GR+ DRQ+FF+N RP D KV
Sbjct: 238 VQLPPSDAICEEYGLNPADIPTRLYTITGFVSRCDHGIGRSTTDRQFFFINQRPCDPTKV 297
Query: 183 SKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEI 242
SKLVNE+Y N QYP ++N + + D+NVTPDKR++F +E +L ++ + +
Sbjct: 298 SKLVNEVYHMYNRHQYPFVVLNICADSESVDINVTPDKRQIFLQEEKLLLAIVKTSMMGM 357
Query: 243 YSPNNASYSVNKV---EQLIEPE---KSGPSSGAES 272
+ + VNK+ ++LI+ E K+ +GAES
Sbjct: 358 FGND-----VNKIVLNQKLIDVEGNFKTTVRNGAES 388
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 54/66 (81%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+PI++ VH+IC+GQV+ +L +AVKELVENS+DAGAT++E+ LK+YG + +V DNGCG
Sbjct: 10 IKPIDRRSVHQICSGQVVLNLCTAVKELVENSIDAGATTVEVKLKDYGADLIEVSDNGCG 69
Query: 72 ISPNNF 77
+ NF
Sbjct: 70 VEEENF 75
>gi|325182796|emb|CCA17251.1| mismatch repair endonuclease pms1 putative [Albugo laibachii Nc14]
Length = 667
Score = 211 bits (537), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 99/210 (47%), Positives = 143/210 (68%), Gaps = 13/210 (6%)
Query: 605 LERLFRKEDFGRMKVIGQFNLGFIIGKLD-QDLFIVDQHAADEKYNFERLSQSTVLNQQP 663
L R+F+K+DF M++IGQFNLGFII K + +DLFI+DQHA+DEK+ +E L ++T+ + QP
Sbjct: 469 LHRVFQKQDFQSMEIIGQFNLGFIIAKYNTKDLFIIDQHASDEKFRYESLQRTTIFHHQP 528
Query: 664 LLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVED 723
L+ P L L+ EE++ H+ + RKNGF+ E D A + + RL ++P SK+ FGV+D
Sbjct: 529 LVHPQSLSLSSTEEMIILDHLQVFRKNGFTFEVDAQAQSN-KLRLLSLPLSKETQFGVKD 587
Query: 724 VKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQK 783
+ +L+S L + +S+ S+V ++LASRACRSS+MIG AL + EM +
Sbjct: 588 LFELVSLLQEYPSNV-----------ESLRLSKVASILASRACRSSVMIGTALSKAEMTR 636
Query: 784 ILEHLADLNSPWNCPHGRPTMRHLVDLTTI 813
I+ L L+ PWNCPHGRPTMRHL D+T +
Sbjct: 637 IVHQLTGLDQPWNCPHGRPTMRHLFDITAL 666
Score = 126 bits (316), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 118/193 (61%), Gaps = 12/193 (6%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSS------SLKDNIITVFGMNIYNCLE 137
+ YALI+ V+F+ +N TG + +VL T+ S+ ++K +I +VFG+ + L
Sbjct: 188 VIHTYALISLNVKFIVSNRTGTR-QQIVLSTESSARRDRLEAMKISIASVFGLKFFKTLI 246
Query: 138 PVAICKSDSC--KVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANS 195
P + ++ + GF+S+ G G+G++ DRQ+ ++N RPVD PK++K ++++++
Sbjct: 247 PFQMDETSTHGRSAYGFISQIGIGAGKSDNDRQFIYINGRPVDAPKLNKAIHQVWRQFEV 306
Query: 196 RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASYSVNKV 255
RQY +++F VP++ D+NVTPDKR VFF E ++ +L+ L +I+ P ++ V
Sbjct: 307 RQYANYVIDFQVPSQDLDLNVTPDKRTVFFRKENEMMESLQTQLLQIFEPAKRIFT---V 363
Query: 256 EQLIEPEKSGPSS 268
+ L E ++S P++
Sbjct: 364 QPLTEEKRSTPNT 376
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 45/66 (68%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
+++ ++ G V RIC+GQ I D A+KEL+EN+LDA AT IEI E+G+ +VVDNG
Sbjct: 4 SMQALDVGDVQRICSGQSIPDAPIALKELIENALDACATQIEIRFVEHGKNAIEVVDNGS 63
Query: 71 GISPNN 76
GI N
Sbjct: 64 GIPIEN 69
>gi|351704976|gb|EHB07895.1| Mismatch repair endonuclease PMS2 [Heterocephalus glaber]
Length = 870
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 105/218 (48%), Positives = 139/218 (63%), Gaps = 15/218 (6%)
Query: 600 AATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVL 659
AA EL + K F M+++GQFNLGFI+ KL +D+F+VDQHAADEKYNFE L Q T L
Sbjct: 667 AAEDELRKEISKTMFAEMEIVGQFNLGFIVTKLKEDIFLVDQHAADEKYNFEMLQQHTAL 726
Query: 660 NQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITF 719
Q L+ P L+LT E V +++I RKNGF D A R +L ++P SK TF
Sbjct: 727 QAQKLIAPQTLNLTAINEAVLIENLEIFRKNGFDFVIDESAPVTKRAKLISLPTSKNWTF 786
Query: 720 GVEDVKDLISTLADNQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGR 778
G +D+ +LI L+D+ G +C PSRVR M ASRACR S+MIG AL
Sbjct: 787 GPQDIDELIFMLSDSPG--------------VMCRPSRVRQMFASRACRKSVMIGTALNT 832
Query: 779 NEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKN 816
+EM+K++ H+ +++ PWNCPHGRPTMRH+ +L I +N
Sbjct: 833 SEMKKLIVHMGEMDHPWNCPHGRPTMRHIANLEVISQN 870
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 105/192 (54%), Gaps = 17/192 (8%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
R V + AY +I+ G+R CTN G+ + V+ T GS+SLK+NI +VFG L P
Sbjct: 190 RMVQVLHAYCIISAGIRVSCTNQLGQGKRQPVVCTSGSTSLKENIGSVFGQKQLQSLLPF 249
Query: 140 -------AICKS----------DSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKV 182
++C+ D + GF+S+ G GR+ DRQ+FF+N RP D KV
Sbjct: 250 VQLPPSESVCEEYGLSCSDTLPDLFHISGFVSRGTHGVGRSAADRQFFFINRRPCDPAKV 309
Query: 183 SKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEI 242
S+LVNE+Y N QYP ++N V + D+NVTPDKR++ +E +L L+ L +
Sbjct: 310 SRLVNEVYHMYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAILKTSLIGM 369
Query: 243 YSPNNASYSVNK 254
+ + +VN+
Sbjct: 370 FDGDVNKLTVNQ 381
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 55/71 (77%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ I+ VH+IC+GQV+ LS+AVKELVENS+DAGAT+I++ LK+YG + +V DNGCG
Sbjct: 22 IKAIDGKSVHQICSGQVVLSLSTAVKELVENSVDAGATNIDLRLKDYGVDLIEVSDNGCG 81
Query: 72 ISPNNFKVRAV 82
+ NF+ A+
Sbjct: 82 VEEENFEALAL 92
>gi|345801327|ref|XP_536879.3| PREDICTED: mismatch repair endonuclease PMS2 [Canis lupus
familiaris]
Length = 866
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 107/218 (49%), Positives = 138/218 (63%), Gaps = 15/218 (6%)
Query: 600 AATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVL 659
AA EL + K F M++IGQFNLGFII KL D+FIVDQHA DEKYNFE L Q TVL
Sbjct: 663 AAEDELRKEISKTMFAEMEIIGQFNLGFIITKLKADIFIVDQHATDEKYNFEMLQQHTVL 722
Query: 660 NQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITF 719
Q L+ P L+LT E + +++I RKNGF D A R +L ++P SK TF
Sbjct: 723 QGQRLIAPQTLNLTAVNEAILIENLEIFRKNGFDFVIDEGAPVTERAKLISLPTSKNWTF 782
Query: 720 GVEDVKDLISTLADNQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGR 778
G +D+ +LI L+D+ G +C PSRVR M ASRACR S+MIG AL
Sbjct: 783 GPQDIDELIFMLSDSPG--------------VMCRPSRVRQMFASRACRKSVMIGTALNT 828
Query: 779 NEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKN 816
+EM+K++ H+ +++ PWNCPHGRPTMRH+ +L I +N
Sbjct: 829 SEMKKLITHMGEMDHPWNCPHGRPTMRHIANLDVISQN 866
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 105/192 (54%), Gaps = 17/192 (8%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP- 138
+ V + AY +I+ G+R C+N G+ + +V+ T GSSS+K+NI +VFG L P
Sbjct: 183 KMVQVLHAYCIISVGIRISCSNQVGQGRRQLVVCTSGSSSVKENIGSVFGQKQLQSLIPF 242
Query: 139 VAICKSDSC----------------KVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKV 182
V + SDS + GF+S G GR+ DRQ+FF+N RP D KV
Sbjct: 243 VQLPPSDSVCEEYGLNRADVLHSRFHISGFISHCAHGVGRSSTDRQFFFINRRPCDPAKV 302
Query: 183 SKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEI 242
S+LVNE+Y N QYP ++N V + D+NVTPDKR++ +E +L L+ L +
Sbjct: 303 SRLVNEVYHMYNRHQYPFIVLNISVDSECIDINVTPDKRQILLQEEKLLLAVLKTSLIAM 362
Query: 243 YSPNNASYSVNK 254
+ N +V++
Sbjct: 363 FDSNVNKLTVSQ 374
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 56/67 (83%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+PI++ VH+IC+GQV+ LS+AVKELVENS+DAGAT+I++ LK+YG ++ +V DNGCG
Sbjct: 15 IKPIDRKSVHQICSGQVVLSLSTAVKELVENSVDAGATNIDLKLKDYGVDFIEVSDNGCG 74
Query: 72 ISPNNFK 78
+ NF+
Sbjct: 75 VKEENFE 81
>gi|440899911|gb|ELR51153.1| Mismatch repair endonuclease PMS2 [Bos grunniens mutus]
Length = 864
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 105/218 (48%), Positives = 138/218 (63%), Gaps = 15/218 (6%)
Query: 600 AATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVL 659
AA EL + K F M++IGQFNLGFII KL+ D+FIVDQHA DEKYNFE L Q TVL
Sbjct: 661 AAEDELRKEISKTMFAEMEIIGQFNLGFIITKLNADIFIVDQHATDEKYNFEMLQQHTVL 720
Query: 660 NQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITF 719
Q L+ P L LT E + +++I RKNGF D HA R +L ++P SK TF
Sbjct: 721 QGQRLIAPQTLSLTAVNEAILIENLEIFRKNGFDFVIDEHAPVTERAKLISLPTSKNWTF 780
Query: 720 GVEDVKDLISTLADNQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGR 778
G +D+ +L+ L+D+ G +C PSRVR M ASRACR S+MIG L
Sbjct: 781 GPQDIDELLFMLSDSPG--------------VMCRPSRVRQMFASRACRKSVMIGTPLNT 826
Query: 779 NEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKN 816
+EM+K++ H+ +++ PWNCPHGRPTMRH+ +L I ++
Sbjct: 827 SEMKKLITHMGEMDHPWNCPHGRPTMRHIANLDVISQS 864
Score = 129 bits (324), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 109/199 (54%), Gaps = 22/199 (11%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP- 138
+ V + QAY +I+ GVR CTN G+ + V+ T GSSS+K+NI VFG L P
Sbjct: 183 KMVQVLQAYCIISAGVRVSCTNQVGQGKRQPVVCTSGSSSMKENIGLVFGQKQLQSLIPF 242
Query: 139 VAICKSDS-CK---------------VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKV 182
V + SDS C+ + GF+S G GR+ DRQ+FF+N RP D KV
Sbjct: 243 VQLPPSDSICEEYGLSCSQALHNLFCISGFVSHCAHGVGRSSTDRQFFFINRRPCDPSKV 302
Query: 183 SKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEI 242
S+LVNE+Y N QYP ++N V + D+NVTPDKR++ +E +L L+ L +
Sbjct: 303 SRLVNEVYHMYNRHQYPFVVLNVSVDSACVDINVTPDKRQILLQEEKLLLAVLKTSLIGM 362
Query: 243 YSPNNASYSVNKVEQLIEP 261
+ + VNK++ +P
Sbjct: 363 FESD-----VNKLQVSQQP 376
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 55/67 (82%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+PI++ VH+IC+GQV+ LS+AVKELVENS+DAGATSI++ LK+YG E +V DNGCG
Sbjct: 15 IKPIDRKSVHQICSGQVVLGLSTAVKELVENSVDAGATSIDLRLKDYGVELIEVSDNGCG 74
Query: 72 ISPNNFK 78
+ NF+
Sbjct: 75 VEEENFE 81
>gi|329664144|ref|NP_001192867.1| mismatch repair endonuclease PMS2 [Bos taurus]
gi|296473094|tpg|DAA15209.1| TPA: PMS2 postmeiotic segregation increased 2 [Bos taurus]
Length = 864
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 105/218 (48%), Positives = 138/218 (63%), Gaps = 15/218 (6%)
Query: 600 AATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVL 659
AA EL + K F M++IGQFNLGFII KL+ D+FIVDQHA DEKYNFE L Q TVL
Sbjct: 661 AAEDELRKEISKTMFAEMEIIGQFNLGFIITKLNADIFIVDQHATDEKYNFEMLQQHTVL 720
Query: 660 NQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITF 719
Q L+ P L LT E + +++I RKNGF D HA R +L ++P SK TF
Sbjct: 721 QGQRLIAPQTLSLTAVNEAILIENLEIFRKNGFDFVIDEHAPVTERAKLISLPTSKNWTF 780
Query: 720 GVEDVKDLISTLADNQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGR 778
G +D+ +L+ L+D+ G +C PSRVR M ASRACR S+MIG L
Sbjct: 781 GPQDIDELLFMLSDSPG--------------VMCRPSRVRQMFASRACRKSVMIGTPLNT 826
Query: 779 NEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKN 816
+EM+K++ H+ +++ PWNCPHGRPTMRH+ +L I ++
Sbjct: 827 SEMKKLITHMGEMDHPWNCPHGRPTMRHIANLDVISQS 864
Score = 129 bits (325), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 109/199 (54%), Gaps = 22/199 (11%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP- 138
+ V + QAY +I+ GVR CTN G+ + V+ T GSSS+K+NI VFG L P
Sbjct: 183 KMVQVLQAYCIISAGVRISCTNQVGQGKRQPVVCTSGSSSMKENIGLVFGQKQLQSLIPF 242
Query: 139 VAICKSDS-CK---------------VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKV 182
V + SDS C+ + GF+S G GR+ DRQ+FF+N RP D KV
Sbjct: 243 VQLPPSDSICEEYGLSCSQALHNLFCISGFVSHCAHGVGRSSTDRQFFFINRRPCDPSKV 302
Query: 183 SKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEI 242
S+LVNE+Y N QYP ++N V + D+NVTPDKR++ +E +L L+ L +
Sbjct: 303 SRLVNEVYHMYNRHQYPFVVLNVSVDSACVDINVTPDKRQILLQEEKLLLAVLKTSLIGM 362
Query: 243 YSPNNASYSVNKVEQLIEP 261
+ + VNK++ +P
Sbjct: 363 FESD-----VNKLQVSQQP 376
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 55/67 (82%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+PI++ VH+IC+GQV+ LS+AVKELVENS+DAGATSI++ LK+YG E +V DNGCG
Sbjct: 15 IKPIDRKSVHQICSGQVVLGLSTAVKELVENSVDAGATSIDLRLKDYGVELIEVSDNGCG 74
Query: 72 ISPNNFK 78
+ NF+
Sbjct: 75 VEEENFE 81
>gi|91079030|ref|XP_974934.1| PREDICTED: similar to DNA mismatch repair protein pms2 [Tribolium
castaneum]
Length = 840
Score = 211 bits (536), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 100/217 (46%), Positives = 137/217 (63%), Gaps = 15/217 (6%)
Query: 600 AATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVL 659
+A EL + KEDF M VIGQFNLGFII KL DLFI+DQHA DEKYNFE+L STV+
Sbjct: 636 SAEEELRKHISKEDFANMDVIGQFNLGFIITKLKNDLFIIDQHATDEKYNFEQLQASTVM 695
Query: 660 NQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITF 719
Q L+ P L LT E + + DI KNGF+ + D A + L ++P SK + F
Sbjct: 696 ENQVLVNPKPLQLTAGNESLLIENEDIFNKNGFTFKIDESAPCTQKVSLTSIPLSKSMVF 755
Query: 720 GVEDVKDLISTLAD-NQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGR 778
G +D+++++ L D N C PSR+RAM A+RACR S+MIG L +
Sbjct: 756 GKQDIEEMLFMLQDSNHTMCR--------------PSRIRAMFATRACRKSVMIGKPLSK 801
Query: 779 NEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRK 815
++M++++ H+ ++ PWNCPHGRPTMRHL++L I++
Sbjct: 802 SDMRRLVNHMGEIEQPWNCPHGRPTMRHLINLDLIQE 838
Score = 135 bits (341), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 105/193 (54%), Gaps = 20/193 (10%)
Query: 84 LCQ---AYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVA 140
+CQ AY L++KG++F CTNTT K K+ V+ T+G + +KDNI VFG L V
Sbjct: 177 MCQLLYAYCLVSKGIKFSCTNTTSKGSKNTVVATEGLNMVKDNITNVFGPKQLPSLIEVE 236
Query: 141 ICKSDSC-----------------KVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVS 183
+ + D E F+S GSGR+ DRQ+F++N RP D KV+
Sbjct: 237 MVRPDETILAEYGIKLTEGDPLPFTFEFFISSVMHGSGRSTNDRQFFYINSRPCDPSKVA 296
Query: 184 KLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIY 243
+LVNE+YK N+ QYP +N + DVNVTPDKR+VF E +L ++ L E +
Sbjct: 297 RLVNEIYKQYNNNQYPFVYLNITSKSSLVDVNVTPDKRQVFLEKEKVLLSTIKASLIEAF 356
Query: 244 SPNNASYSVNKVE 256
++Y + ++
Sbjct: 357 KMFPSTYKMQNLD 369
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 52/67 (77%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+PIN+ VHRIC+GQV+ L+ AVKELVEN++DAGAT I+I LKEYG E +V DNG G
Sbjct: 8 IQPINRDTVHRICSGQVVLSLAIAVKELVENAIDAGATIIDIQLKEYGSEIIEVSDNGSG 67
Query: 72 ISPNNFK 78
+ NF+
Sbjct: 68 VLKENFQ 74
>gi|426254881|ref|XP_004021103.1| PREDICTED: mismatch repair endonuclease PMS2 [Ovis aries]
Length = 864
Score = 210 bits (535), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 105/218 (48%), Positives = 138/218 (63%), Gaps = 15/218 (6%)
Query: 600 AATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVL 659
AA EL + K F M++IGQFNLGFII KL+ D+FIVDQHA DEKYNFE L Q TVL
Sbjct: 661 AAEDELRKEISKTMFAEMEIIGQFNLGFIITKLNADIFIVDQHATDEKYNFEMLQQHTVL 720
Query: 660 NQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITF 719
Q L+ P L LT E + +++I RKNGF D HA R +L ++P SK TF
Sbjct: 721 QGQRLIAPQTLSLTAVNEAILIENLEIFRKNGFDFVIDEHAPVTERAKLISLPTSKNWTF 780
Query: 720 GVEDVKDLISTLADNQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGR 778
G +D+ +L+ L+D+ G +C PSRVR M ASRACR S+MIG L
Sbjct: 781 GPQDIDELLFMLSDSPG--------------VMCRPSRVRQMFASRACRKSVMIGTPLNT 826
Query: 779 NEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKN 816
+EM+K++ H+ +++ PWNCPHGRPTMRH+ +L I ++
Sbjct: 827 SEMKKLITHMGEMDHPWNCPHGRPTMRHIANLDVISQS 864
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/200 (38%), Positives = 109/200 (54%), Gaps = 22/200 (11%)
Query: 79 VRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP 138
+ V + QAY +I+ GVR CTN G+ + V+ T GSSS+K+NI VFG L P
Sbjct: 182 TKMVQVLQAYCIISAGVRISCTNQVGQGKRQPVVCTSGSSSMKENIGLVFGQKQLQSLIP 241
Query: 139 -VAICKSDS-CK---------------VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPK 181
V + SDS C+ + GF+S G GR+ DRQ+FF+N RP D K
Sbjct: 242 FVQLPPSDSICEEYGLSCSQALHNLFCISGFISHCAHGVGRSSTDRQFFFINRRPCDPAK 301
Query: 182 VSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQE 241
VS+LVNE+Y N QYP ++N V + D+NVTPDKR++ +E +L L+ L
Sbjct: 302 VSRLVNEVYHMYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLIG 361
Query: 242 IYSPNNASYSVNKVEQLIEP 261
++ + VNK++ +P
Sbjct: 362 MFESD-----VNKLQVSQQP 376
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 55/67 (82%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+PI++ VH+IC+GQV+ LS+AVKELVENS+DAGATSI++ LK+YG E +V DNGCG
Sbjct: 15 IKPIDRKSVHQICSGQVVLGLSTAVKELVENSVDAGATSIDLRLKDYGVELIEVSDNGCG 74
Query: 72 ISPNNFK 78
+ NF+
Sbjct: 75 VEEANFE 81
>gi|432100057|gb|ELK28950.1| Mismatch repair endonuclease PMS2 [Myotis davidii]
Length = 841
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 111/223 (49%), Positives = 139/223 (62%), Gaps = 20/223 (8%)
Query: 600 AATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVL 659
AA EL + K F M+VIGQFNLGFII KLD DLFIVDQHA DEKYNFE L Q T L
Sbjct: 633 AAEEELRKEISKTMFAEMEVIGQFNLGFIITKLDADLFIVDQHATDEKYNFEMLQQHTAL 692
Query: 660 NQQPLLR-----PLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFS 714
Q L+R P L+LT E V +++I RKNGF D A R +L ++P S
Sbjct: 693 QGQRLIRQVHIRPQTLNLTAVNEAVLIENLEIFRKNGFDFVIDESAPITERAKLISLPTS 752
Query: 715 KKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIG 773
K TFG +D+ +LI L+D+ G +C PSRVR M ASRACR S+MIG
Sbjct: 753 KNWTFGPQDIDELIFMLSDSPG--------------VMCRPSRVRQMFASRACRKSVMIG 798
Query: 774 DALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKN 816
AL +EM+K++ H+ +++ PWNCPHGRPTMRH+ +L I +N
Sbjct: 799 TALNTSEMKKLIAHMGEMDHPWNCPHGRPTMRHIANLDVISQN 841
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/182 (40%), Positives = 102/182 (56%), Gaps = 17/182 (9%)
Query: 79 VRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP 138
+ V + AY +I+ GVR CTN G+ + V+ T GSSS++DNI +VFG L P
Sbjct: 163 AKMVHVLHAYCIISSGVRVSCTNQVGQGKRQPVVGTSGSSSIRDNIGSVFGQKQLQSLIP 222
Query: 139 -VAICKSDS-CK---------------VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPK 181
V + SDS C+ + GF+S G GR+ DRQ+FF+N RP D K
Sbjct: 223 FVQLPPSDSVCEEFGLSCSDALQNQFCISGFISHCTHGVGRSSTDRQFFFINWRPCDPAK 282
Query: 182 VSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQE 241
VS+LVNE+Y N QYP ++N V + D+NVTPDKR++F DE +L L+ L
Sbjct: 283 VSRLVNEVYHMYNRHQYPFVVLNVSVDSGCVDINVTPDKRQIFLQDEKLLLAVLKTSLIG 342
Query: 242 IY 243
++
Sbjct: 343 MF 344
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 46/56 (82%)
Query: 23 ICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFK 78
IC+GQV+ LSSAVKELVENS+DAGAT+I++ LK+YG + +V DNGCG+ NF+
Sbjct: 7 ICSGQVVLSLSSAVKELVENSVDAGATNIDLRLKDYGVDLIEVSDNGCGVEEENFE 62
>gi|195028197|ref|XP_001986963.1| GH21651 [Drosophila grimshawi]
gi|193902963|gb|EDW01830.1| GH21651 [Drosophila grimshawi]
Length = 903
Score = 210 bits (534), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 105/223 (47%), Positives = 140/223 (62%), Gaps = 15/223 (6%)
Query: 601 ATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLN 660
A EL++ K DF RM++IGQFNLGFII KLD DLFIVDQHAADEKYNFE L ++T L
Sbjct: 678 AEAELQKEITKADFERMQIIGQFNLGFIIVKLDDDLFIVDQHAADEKYNFETLQRTTQLE 737
Query: 661 QQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFG 720
Q L P L+LT E++ ++ + KNGF E + A A + RL P+SK FG
Sbjct: 738 HQRLTVPQTLELTAVNEMILQDYLPVFEKNGFKFEINADAPATQKVRLLGKPYSKNWEFG 797
Query: 721 VEDVKDLISTLADNQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGRN 779
ED+ +LI L D ++C PSR+RAM ASRACR S+MIG AL R+
Sbjct: 798 KEDIDELIFMLQDA-------------PEGTICRPSRIRAMFASRACRKSVMIGKALHRS 844
Query: 780 -EMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKNIDENG 821
M++++ + ++ PWNCPHGRPTMRHL+++T + ++N
Sbjct: 845 TTMRRLITQMGEIEQPWNCPHGRPTMRHLINVTMLMDEEEDNA 887
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 91/182 (50%), Gaps = 37/182 (20%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV---- 139
+ QAY L+ VR +C+N T K VKSVVL+T G++ + NI VFG L P+
Sbjct: 193 ILQAYCLVTTSVRIICSNHTPKGVKSVVLQTHGAADVLANISAVFGARQVADLVPLKSPF 252
Query: 140 -AICKSDSC--------------------------------KVEGFLSKPGQGSGRNLGD 166
A S+ C ++EG++S G+GR+ D
Sbjct: 253 EAGELSEECLRAELQSTSDVAETTCTQFSSEDVQRLNQADFQLEGYISSCRHGAGRSARD 312
Query: 167 RQYFFVNDRPVDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFS 226
RQ+FFVN RP + ++K++N++Y N +Q P +N + DVN+TPDKR++ +
Sbjct: 313 RQFFFVNARPCEPKSIAKIMNDVYHRYNVQQQPFIYLNIVTARDEVDVNLTPDKRQLLLN 372
Query: 227 DE 228
+E
Sbjct: 373 NE 374
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/80 (48%), Positives = 56/80 (70%), Gaps = 2/80 (2%)
Query: 1 MDVETPTNSPT--IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEY 58
+ V TPT+S + I+ I K VH+IC+GQV+ L+ A+KELVENS+DAGAT IE+ L++
Sbjct: 8 VSVPTPTSSASGQIKAIAKDTVHKICSGQVVLSLAVAIKELVENSIDAGATLIEVKLRDQ 67
Query: 59 GEEWFQVVDNGCGISPNNFK 78
G + +V DNG G+ N +
Sbjct: 68 GLQGVEVCDNGSGVEEANLE 87
>gi|270003668|gb|EFA00116.1| hypothetical protein TcasGA2_TC002932 [Tribolium castaneum]
Length = 807
Score = 209 bits (533), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 99/213 (46%), Positives = 135/213 (63%), Gaps = 15/213 (7%)
Query: 604 ELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQP 663
EL + KEDF M VIGQFNLGFII KL DLFI+DQHA DEKYNFE+L STV+ Q
Sbjct: 607 ELRKHISKEDFANMDVIGQFNLGFIITKLKNDLFIIDQHATDEKYNFEQLQASTVMENQV 666
Query: 664 LLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVED 723
L+ P L LT E + + DI KNGF+ + D A + L ++P SK + FG +D
Sbjct: 667 LVNPKPLQLTAGNESLLIENEDIFNKNGFTFKIDESAPCTQKVSLTSIPLSKSMVFGKQD 726
Query: 724 VKDLISTLAD-NQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQ 782
+++++ L D N C PSR+RAM A+RACR S+MIG L +++M+
Sbjct: 727 IEEMLFMLQDSNHTMCR--------------PSRIRAMFATRACRKSVMIGKPLSKSDMR 772
Query: 783 KILEHLADLNSPWNCPHGRPTMRHLVDLTTIRK 815
+++ H+ ++ PWNCPHGRPTMRHL++L I++
Sbjct: 773 RLVNHMGEIEQPWNCPHGRPTMRHLINLDLIQE 805
Score = 135 bits (341), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 105/193 (54%), Gaps = 20/193 (10%)
Query: 84 LCQ---AYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVA 140
+CQ AY L++KG++F CTNTT K K+ V+ T+G + +KDNI VFG L V
Sbjct: 177 MCQLLYAYCLVSKGIKFSCTNTTSKGSKNTVVATEGLNMVKDNITNVFGPKQLPSLIEVE 236
Query: 141 ICKSDSC-----------------KVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVS 183
+ + D E F+S GSGR+ DRQ+F++N RP D KV+
Sbjct: 237 MVRPDETILAEYGIKLTEGDPLPFTFEFFISSVMHGSGRSTNDRQFFYINSRPCDPSKVA 296
Query: 184 KLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIY 243
+LVNE+YK N+ QYP +N + DVNVTPDKR+VF E +L ++ L E +
Sbjct: 297 RLVNEIYKQYNNNQYPFVYLNITSKSSLVDVNVTPDKRQVFLEKEKVLLSTIKASLIEAF 356
Query: 244 SPNNASYSVNKVE 256
++Y + ++
Sbjct: 357 KMFPSTYKMQNLD 369
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 52/67 (77%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+PIN+ VHRIC+GQV+ L+ AVKELVEN++DAGAT I+I LKEYG E +V DNG G
Sbjct: 8 IQPINRDTVHRICSGQVVLSLAIAVKELVENAIDAGATIIDIQLKEYGSEIIEVSDNGSG 67
Query: 72 ISPNNFK 78
+ NF+
Sbjct: 68 VLKENFQ 74
>gi|291233099|ref|XP_002736491.1| PREDICTED: PMS2 postmeiotic segregation increased 2-like, partial
[Saccoglossus kowalevskii]
Length = 532
Score = 209 bits (532), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 105/215 (48%), Positives = 140/215 (65%), Gaps = 16/215 (7%)
Query: 600 AATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVL 659
+A EL+R KE F M+VIGQFNLGFII K+ +DLFIVDQHA DEKYNFE L + T +
Sbjct: 331 SAEEELQRKISKEMFKDMEVIGQFNLGFIIVKIKEDLFIVDQHATDEKYNFEMLQKHTNI 390
Query: 660 NQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITF 719
Q L++P KL+LTP E V +++I +KNGF + G + +L ++P SK TF
Sbjct: 391 QSQKLIQPQKLELTPVNESVLMDNLEIFQKNGFDFITE-EGDTGKKVKLISLPMSKNWTF 449
Query: 720 GVEDVKDLISTLADNQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGR 778
G +D+ +LI L D G ++C PSRVR M ASRACR SIM+G AL +
Sbjct: 450 GKQDIDELIFMLNDAPG--------------TMCRPSRVRQMFASRACRQSIMVGTALNK 495
Query: 779 NEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTI 813
EM+K++ H+ ++ PWNCPHGRPTMRHL ++T +
Sbjct: 496 TEMKKLICHMGEIEQPWNCPHGRPTMRHLFNITML 530
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 84/148 (56%), Gaps = 9/148 (6%)
Query: 122 DNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPK 181
+ + T +G+N +D K+ G +SKP G GR+ DRQ+ F+N RP D K
Sbjct: 14 EEVCTEYGLN-------KGALNTDVFKLSGLVSKPDHGLGRSTCDRQFCFINKRPCDYSK 66
Query: 182 VSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQE 241
V K++NE+Y N QYP +++ + + DVN+TPDKR++ ++E ++L ++ L +
Sbjct: 67 VFKVLNEVYHMYNRHQYPFVVLDITLSKESVDVNITPDKRQILVAEEKTLLAVVKSSLIK 126
Query: 242 IYSPNNASYSVNKVEQLI--EPEKSGPS 267
+Y P +A Y +N+ I P + GP+
Sbjct: 127 LYEPRSALYQMNQKPMAILKSPSQPGPA 154
>gi|198459330|ref|XP_001361342.2| GA20862 [Drosophila pseudoobscura pseudoobscura]
gi|198136656|gb|EAL25920.2| GA20862 [Drosophila pseudoobscura pseudoobscura]
Length = 881
Score = 209 bits (531), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 106/215 (49%), Positives = 136/215 (63%), Gaps = 15/215 (6%)
Query: 601 ATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLN 660
A EL+R K+DF RM +IGQFNLGFII KL DLFIVDQHA+DEKYNFE L +ST L
Sbjct: 661 AEDELQREIAKDDFARMDIIGQFNLGFIIVKLQDDLFIVDQHASDEKYNFETLQRSTQLE 720
Query: 661 QQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFG 720
Q L P LDLT E+V H+ + KNGF E + A A + RL P+S++ FG
Sbjct: 721 YQRLTVPQCLDLTAVNEMVLIDHLPVFEKNGFKFEINHEAPATKKVRLLGKPYSRQWEFG 780
Query: 721 VEDVKDLISTLADNQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGR- 778
ED+ +LI L D ++C PSRVR+M ASRACR S+MIG AL R
Sbjct: 781 KEDIDELIFMLQDA-------------PEGTICRPSRVRSMFASRACRKSVMIGTALNRT 827
Query: 779 NEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTI 813
M++++ + ++ PWNCPHGRPTMRHL+++T +
Sbjct: 828 TTMRRLITQMGEIEQPWNCPHGRPTMRHLINITML 862
Score = 108 bits (271), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 90/182 (49%), Gaps = 37/182 (20%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFG-------------- 129
+ QAY L+ KGVR +C+N T K K+VVL+T G+ + NI +FG
Sbjct: 193 ILQAYCLVTKGVRIICSNQTPKGAKTVVLQTHGAQDVLANISAIFGARQVADIVPLKSPF 252
Query: 130 -------MNIYNCLEPVAICKSDSC----------------KVEGFLSKPGQGSGRNLGD 166
+ + LE A +C ++EG++S G+GR+ D
Sbjct: 253 EKGQLSEVGLRAELESSADAADTTCTQFSAEDVERLNQADFRLEGYISSCRHGAGRSSRD 312
Query: 167 RQYFFVNDRPVDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFS 226
RQ+FFVN RP D ++K++NE Y N +Q P +N I DVN+TPDKR++ +
Sbjct: 313 RQFFFVNARPCDPKNIAKVINETYHRYNVQQQPFIYLNIITARSDVDVNLTPDKRQLLLN 372
Query: 227 DE 228
+E
Sbjct: 373 NE 374
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 54/82 (65%), Gaps = 4/82 (4%)
Query: 2 DVETPT----NSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKE 57
DVE P S I+ I+K VH+IC+GQV+ L+ AVKELVENS+DAGAT +EI +K+
Sbjct: 7 DVELPAPTTAASGQIKAISKDTVHKICSGQVVLSLAVAVKELVENSIDAGATLVEIKMKD 66
Query: 58 YGEEWFQVVDNGCGISPNNFKV 79
G + +V DNG G+ N +
Sbjct: 67 QGLQGVEVSDNGSGVVEANLEA 88
>gi|345563548|gb|EGX46548.1| hypothetical protein AOL_s00109g120 [Arthrobotrys oligospora ATCC
24927]
Length = 1066
Score = 208 bits (530), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 99/207 (47%), Positives = 138/207 (66%), Gaps = 19/207 (9%)
Query: 611 KEDFGRMKVIGQFNLGFII-------GKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQP 663
K DF +M++ GQFNLGFI+ G DLFI+DQHA+DEKYNFERL TV+ QP
Sbjct: 820 KSDFAKMRIAGQFNLGFILATRLSEKGDGVNDLFIIDQHASDEKYNFERLQAETVVQNQP 879
Query: 664 LLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVED 723
L+RP L+L+ +E+V +MD+++KNGF +E D G R RL ++P SK F ++D
Sbjct: 880 LVRPKVLELSAMDELVVMDNMDVLKKNGFVVEIDDEGPVGKRCRLVSLPMSKDKVFDLKD 939
Query: 724 VKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQK 783
++L+ + ++ + D+V PS+VRAM A RACRSSIMIG LG +M+K
Sbjct: 940 FEELLHLIREHPND------------DTVRPSKVRAMFAMRACRSSIMIGRTLGLKDMKK 987
Query: 784 ILEHLADLNSPWNCPHGRPTMRHLVDL 810
+++H+ +L+ PWNCPHGRPTMRHL D+
Sbjct: 988 VVKHMGELDKPWNCPHGRPTMRHLCDV 1014
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 96/180 (53%), Gaps = 15/180 (8%)
Query: 79 VRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP 138
R V QAYA++ GV+F N K+++ T+ + + K+NI VFG L P
Sbjct: 173 ARVVSFLQAYAIVCVGVKFTVYNHPPNGKKTLLFSTKANKTTKENIANVFGAKALANLIP 232
Query: 139 VAI-------------CKSDS--CKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVS 183
+ + + D+ K+ G +S+P G GR DRQ FFVN RP +LP+V+
Sbjct: 233 LNLEFEMNTPTSVLHRGREDTRNVKIVGHISRPVFGEGRQAPDRQLFFVNSRPCNLPQVA 292
Query: 184 KLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIY 243
+ +NE+YK N Q P + + T A DVNV+PDKR + D+ S+L +L+ L +++
Sbjct: 293 RAINEVYKSYNLTQSPFVFADLQLDTTAYDVNVSPDKRTILLHDQASLLESLKTSLTKLF 352
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 48/67 (71%), Gaps = 1/67 (1%)
Query: 12 IRPINKGVVHRICAGQVIKD-LSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
I+ I VH+I +GQVI D L SAVKELVENS+DA ATSIEI K +G + +V DNG
Sbjct: 4 IKAIEGRSVHQIQSGQVISDGLCSAVKELVENSIDANATSIEIRFKNHGLDLIEVSDNGL 63
Query: 71 GISPNNF 77
GISP NF
Sbjct: 64 GISPENF 70
>gi|298710162|emb|CBJ31872.1| postmeiotic segregation increased 2 [Ectocarpus siliculosus]
Length = 907
Score = 208 bits (530), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 113/282 (40%), Positives = 160/282 (56%), Gaps = 30/282 (10%)
Query: 535 SSSLDICSTLQFSIQDLRK--RRQQRLSIMQSSCHTSG---SVKMRRCFAAATLELSQPE 589
+SS C L + ++ + RR RL+ +++ + S S K+ C A
Sbjct: 636 TSSGAACQPLAYDMRSILGGCRRASRLTRKRNARNASADSFSAKLSGCGA---------- 685
Query: 590 NEERKARALAAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYN 649
K R AA R+ KE F +M+V+GQFNLGF+I L DLFI+DQHA DEKYN
Sbjct: 686 ----KDRDSQAAARAFSRVLHKEHFTQMRVVGQFNLGFMICLLGSDLFILDQHACDEKYN 741
Query: 650 FERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLK 709
FE L Q+T ++QQPL+RPL L+ + EE+ ++ + +NGF D + ++
Sbjct: 742 FEVLQQTTTIHQQPLVRPLPLETSASEEMTIIDNIALFERNGFRFTIDDDQPTTKKLKIT 801
Query: 710 AVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSS 769
A+PFSK FGV+DV +L S +ADN + + V + RAM ASRACRSS
Sbjct: 802 AIPFSKGTQFGVDDVHELASIVADN-----------TNPGEMVRLPKARAMFASRACRSS 850
Query: 770 IMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLT 811
MIG AL + +M +++ +A + PWNCPHGRPTMRHL D++
Sbjct: 851 FMIGKALDKGQMARVVAKMATIEQPWNCPHGRPTMRHLADVS 892
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 104/214 (48%), Gaps = 40/214 (18%)
Query: 86 QAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAIC--- 142
QAYALI+ GVR TNT K K + TQ ++ L DN+ VFG L PV+IC
Sbjct: 181 QAYALISLGVRITVTNTKAKGGKQTHIGTQYNNKLDDNVTNVFGAKFLKTLSPVSICLPE 240
Query: 143 ------------------------------------KSDSCKVEGFLSKPGQGSGRNLGD 166
K K+ G +SK G G GR D
Sbjct: 241 EGTQNEEEEEEEEEEVENKKQGQQGGSVTGSGAQKAKDGERKIWGMVSKAGVGVGRADND 300
Query: 167 RQYFFVNDRPVDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFS 226
RQ+ ++N RPVDLPK ++ V+E+++ +Q P I++ +P DVNVTPDKR++F +
Sbjct: 301 RQFLYLNGRPVDLPKFTRAVSEVWRAYEMKQKPAFILDLRLPPGTFDVNVTPDKREIFMT 360
Query: 227 DECSILHALREGLQEIYSPNNASYSVNKVEQLIE 260
E +L L+ L + + + + VN+ QL++
Sbjct: 361 GEAEVLDCLKTALHKQWESSRYTIPVNQ-GQLVQ 393
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/69 (59%), Positives = 56/69 (81%)
Query: 10 PTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNG 69
P+I+ I+K V RIC+GQVI DL++AVKELVENSLDAGA +E+ LKE+G + +V DNG
Sbjct: 4 PSIKAIDKVSVARICSGQVITDLATAVKELVENSLDAGAKHVEVKLKEFGVDLIEVSDNG 63
Query: 70 CGISPNNFK 78
G+SP+N++
Sbjct: 64 SGVSPSNYE 72
>gi|390345876|ref|XP_786592.3| PREDICTED: mismatch repair endonuclease PMS2-like
[Strongylocentrotus purpuratus]
Length = 931
Score = 208 bits (530), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 104/216 (48%), Positives = 137/216 (63%), Gaps = 15/216 (6%)
Query: 599 AAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTV 658
A+A EL R K+ F +M+++GQFNLGFII KL QDLFI+DQHA DEKYNFE L + TV
Sbjct: 728 ASAEEELSREISKDMFSKMEILGQFNLGFIIAKLGQDLFIIDQHATDEKYNFETLQKHTV 787
Query: 659 LNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKIT 718
L Q L++PL L+LT E + ++I +KNGF + R +L + PFSK T
Sbjct: 788 LQGQRLIQPLPLELTAVNESILMDDVEIFKKNGFDFIINEDGRPTERVKLVSQPFSKNWT 847
Query: 719 FGVEDVKDLISTLADNQG-ECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALG 777
FG +D+ +LI L+D G C P++VR M ASR+CR SIMIG AL
Sbjct: 848 FGKDDIDELIFMLSDAPGVHCR--------------PTKVRQMFASRSCRKSIMIGTALN 893
Query: 778 RNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTI 813
+ EM+K++ H+ +L PWNCPHGRPTMRHL +L +
Sbjct: 894 KAEMKKLVCHMGELEQPWNCPHGRPTMRHLFNLNMM 929
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 83/215 (38%), Positives = 121/215 (56%), Gaps = 23/215 (10%)
Query: 79 VRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFG-------MN 131
+ V + QAY +IA GV+ CTN T K KS+V+ T G+S++++N+ VFG +
Sbjct: 174 TKMVQVLQAYCIIASGVKLTCTNQTDKGKKSLVVSTNGTSTMRENVANVFGSKQIQSLLE 233
Query: 132 IYNCLEPVAICKSDSCK----------VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPK 181
C +C+ K + GF+SK G GR+ DRQY+F+N RP D PK
Sbjct: 234 FDQCKPTPEMCEEYGIKPERLEKIPFSISGFVSKCDHGQGRSAADRQYYFINRRPCDFPK 293
Query: 182 VSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQE 241
VSKL+NE++ N QYP +M+ + A DVNVTPDKRKV +E ++L L+ L+
Sbjct: 294 VSKLINEVFHMYNRHQYPFVVMDISLAKDAVDVNVTPDKRKVLVQEEKTLLAILKASLKT 353
Query: 242 IYSPNNASYSVNKVEQLIEPEKS-GPSSGAESCMF 275
++ P ++ Y VN+ +P + PSS A S MF
Sbjct: 354 MFEPRSSCYDVNQ-----KPLSAVTPSSLALSNMF 383
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 51/66 (77%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
++ I++ VH+IC+GQV+ +L++A+KELVENSLDAGAT IEI LK+YG E +V DN G
Sbjct: 7 VKAIDRRSVHQICSGQVVLNLATAIKELVENSLDAGATIIEIKLKDYGGESLEVSDNASG 66
Query: 72 ISPNNF 77
+ NF
Sbjct: 67 VQECNF 72
>gi|301784411|ref|XP_002927619.1| PREDICTED: mismatch repair endonuclease PMS2-like [Ailuropoda
melanoleuca]
Length = 870
Score = 207 bits (528), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 106/218 (48%), Positives = 138/218 (63%), Gaps = 15/218 (6%)
Query: 600 AATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVL 659
AA EL + K F M++IGQFNLGFII KL+ D+FIVDQHA DEKYNFE L Q T L
Sbjct: 667 AAEDELRKEISKTMFAEMEIIGQFNLGFIITKLNADIFIVDQHATDEKYNFEMLQQHTAL 726
Query: 660 NQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITF 719
Q L+ P L+LT E V +++I RKNGF D A R +L ++P SK TF
Sbjct: 727 QGQRLIAPQTLNLTAVNEAVLIENLEIFRKNGFDFIIDEGAPVTERAKLISLPTSKNWTF 786
Query: 720 GVEDVKDLISTLADNQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGR 778
G +D+ +LI L+D+ G +C PSRVR M ASRACR S+MIG AL
Sbjct: 787 GPQDIDELIFMLSDSPG--------------VMCRPSRVRQMFASRACRKSVMIGTALNT 832
Query: 779 NEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKN 816
+EM+K++ H+ +++ PWNCPHGRPTMRH+ +L I ++
Sbjct: 833 SEMKKLVTHMGEMDHPWNCPHGRPTMRHMANLDVISQS 870
Score = 129 bits (324), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 102/182 (56%), Gaps = 17/182 (9%)
Query: 79 VRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP 138
+ V + AY +I+ G+R C+N G+ + V+ T GSSS+K+NI +VFG L P
Sbjct: 182 AKMVQVLHAYCIISAGIRVSCSNQVGQGKRQPVVCTSGSSSIKENIASVFGQKQLQSLIP 241
Query: 139 VA-------ICK------SDSCK----VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPK 181
A +C+ +D+ + + GF+S G GR+ DRQ+FF+N RP D K
Sbjct: 242 FAQLPPSDSVCEEYGLSPADAVQTLFHISGFISHCAHGVGRSSADRQFFFINGRPCDPAK 301
Query: 182 VSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQE 241
VS+LVNE+Y N QYP ++N V + D+NVTPDKR++ +E +L L+ L
Sbjct: 302 VSRLVNEVYHMYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLVG 361
Query: 242 IY 243
++
Sbjct: 362 MF 363
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 55/67 (82%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+PI++ VH+IC+GQV+ LS+AVKELVENS+DAGAT+I++ LK+YG + +V DNGCG
Sbjct: 15 IKPIDRKSVHQICSGQVVLSLSTAVKELVENSVDAGATTIDLRLKDYGVDLIEVSDNGCG 74
Query: 72 ISPNNFK 78
+ NF+
Sbjct: 75 VEEENFE 81
>gi|292619425|ref|XP_693648.4| PREDICTED: mismatch repair endonuclease PMS2 [Danio rerio]
Length = 849
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 125/289 (43%), Positives = 165/289 (57%), Gaps = 31/289 (10%)
Query: 529 LDAPVPSSSLDICSTLQFSIQDLRKRRQQRLSIMQSSCHTSGSVKMRRCFAAATLELSQP 588
DAPV + L FS Q+L KR QRL Q + K RR A +++
Sbjct: 591 FDAPVNIKKKTVL--LPFSQQELSKR-MQRLQ-AQRTKSNEQEPKYRRFRA----KINPG 642
Query: 589 ENEERKARALAAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKY 648
EN+ A EL++ K+ F M++IGQFNLGFII K+ DLFI+DQHA DEKY
Sbjct: 643 ENQ--------TAEDELKKEISKDMFKEMEIIGQFNLGFIITKIKSDLFIIDQHATDEKY 694
Query: 649 NFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRL 708
NFE L Q+TVL Q L+ P L L E V +++I RKNGF D A R +L
Sbjct: 695 NFEMLQQNTVLKGQRLIVPQSLHLPAISETVLMENLEIFRKNGFDFLIDEDAQVMDRVKL 754
Query: 709 KAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVC-PSRVRAMLASRACR 767
++P SK TFG D+++LI L+D+ G +C PSRVR M ASRACR
Sbjct: 755 VSLPTSKNWTFGPNDIEELIFMLSDSPG--------------IMCRPSRVRQMFASRACR 800
Query: 768 SSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKN 816
S+M+G AL +EM+K++ H+ ++ PWNCPHGRPTMRHL +L I ++
Sbjct: 801 KSVMVGTALNTSEMKKLVLHMGEIEQPWNCPHGRPTMRHLANLDMISQD 849
Score = 139 bits (350), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 78/211 (36%), Positives = 112/211 (53%), Gaps = 21/211 (9%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
+ +F+ Q+Y +I+ GVR C+N G+ +S VL T GS+S++DNI VFG L P
Sbjct: 180 KMIFVLQSYCIISTGVRITCSNQMGQGKRSTVLCTSGSNSMRDNIGAVFGPKQLQSLIPF 239
Query: 140 -AICKSDSCK----------------VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKV 182
I +DS K ++GF+S+ G GR+ DRQ+FF+N RP D KV
Sbjct: 240 RQISPNDSVKEDYGLGGVDVPKDLFNIDGFVSQGDHGVGRSATDRQFFFINKRPCDPVKV 299
Query: 183 SKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEI 242
SKLVNE+Y N QYP +N V + DVNVTPDKR++ +E +L L+ L +
Sbjct: 300 SKLVNEVYHMYNRHQYPFVALNIAVASDCVDVNVTPDKRQILLQEEKLLLAILKSSLIAM 359
Query: 243 YSPNNASYSVNKVEQLIEPEKSGPSSGAESC 273
+ S+N I P + +G +C
Sbjct: 360 FETGVNKISLNH----ISPAFTSKPTGTSAC 386
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 52/67 (77%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ I+K VH+IC+GQV+ L++AVKELVENS+DAGAT++++ LK+ G E +V DNG G
Sbjct: 12 IKAIDKQSVHQICSGQVVLSLATAVKELVENSIDAGATNVDVKLKDNGIELVEVSDNGKG 71
Query: 72 ISPNNFK 78
+ N++
Sbjct: 72 VEEQNYE 78
>gi|260946133|ref|XP_002617364.1| hypothetical protein CLUG_02808 [Clavispora lusitaniae ATCC 42720]
gi|238849218|gb|EEQ38682.1| hypothetical protein CLUG_02808 [Clavispora lusitaniae ATCC 42720]
Length = 878
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 102/202 (50%), Positives = 138/202 (68%), Gaps = 2/202 (0%)
Query: 609 FRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPL 668
K+DF RM V+GQFNLGF++ D LFIVDQHA+DE +N+ERL QS VL QPL+ P
Sbjct: 668 IHKDDFARMSVVGQFNLGFVVVVHDNRLFIVDQHASDEIFNYERLMQSLVLRAQPLVIPR 727
Query: 669 KLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLI 728
L+L+P +E+V +++ +R+NGF ++ED A+ G R +L AVP SK + F D+ +L+
Sbjct: 728 LLELSPVDEMVLLENVENLRRNGFVVQEDADAVPGRRVKLMAVPVSKNVVFDDGDLHELM 787
Query: 729 STLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHL 788
L +N G S +S+ + C S+V M+ASRACR SIMIG +L +N M K++ HL
Sbjct: 788 HRLHEN-GFASSMSTQERPRLVVRC-SKVDKMIASRACRRSIMIGQSLSKNTMAKVVRHL 845
Query: 789 ADLNSPWNCPHGRPTMRHLVDL 810
+ L PWNCPHGRPTMRHL DL
Sbjct: 846 SRLEKPWNCPHGRPTMRHLADL 867
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 97/193 (50%), Gaps = 22/193 (11%)
Query: 87 AYALIAKGVRFVCTN---TTGKNVKSVVLKTQG-SSSLKDNIITVFGMNIYNCLEPVAIC 142
+Y L +RF N T+GK K++ L +QG SSS+ D + ++FG N L + +
Sbjct: 180 SYLLAYPHIRFAVYNINATSGK--KTLTLGSQGGSSSVTDVLTSIFGSNGAYGLVSIDVA 237
Query: 143 KSD----------------SCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLV 186
SD + KV G++S G GR DRQY +N RPV+ + +K++
Sbjct: 238 ASDIDVRFKLSANTVPVSLAMKVCGWISDYSFGMGRGGTDRQYLCINRRPVNHKRFAKVI 297
Query: 187 NELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPN 246
NE+Y+ N+ Q P+ ++N + + DVNVTPDKR V + E + LRE L Y
Sbjct: 298 NEVYRTFNATQSPVYVLNIEIDSTFVDVNVTPDKRMVMINSEEILCEVLREELTYFYRDR 357
Query: 247 NASYSVNKVEQLI 259
+ S N + I
Sbjct: 358 HNSLPKNNLTSQI 370
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 39/67 (58%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I I V +I +GQVI +L S VKELVENS+DA + I++ G +V DNG G
Sbjct: 3 IGSIQTSDVAKITSGQVIIELLSVVKELVENSIDAESDKIDVVFNNNGITSVEVSDNGTG 62
Query: 72 ISPNNFK 78
I +F+
Sbjct: 63 IEKEDFE 69
>gi|37051337|dbj|BAC81643.1| PMS2-C terminal -like [Homo sapiens]
Length = 191
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 103/204 (50%), Positives = 135/204 (66%), Gaps = 15/204 (7%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLT 673
F M++IGQFNLGFII KL++D+FIVDQHA DEKYNFE L Q TVL Q L+ P L+LT
Sbjct: 2 FAEMEIIGQFNLGFIITKLNEDIFIVDQHATDEKYNFEMLQQHTVLQGQRLIAPQTLNLT 61
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
E V +++I RKNGF D +A R +L ++P SK TFG +DV +LI L+D
Sbjct: 62 AVNEAVLIENLEIFRKNGFDFVIDENAPVTERAKLISLPTSKSWTFGPQDVDELIFMLSD 121
Query: 734 NQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLN 792
+ G +C PSRV+ M ASRACR S+MIG AL +EM+K++ H+ +++
Sbjct: 122 SPG--------------VMCRPSRVKQMFASRACRKSVMIGTALNTSEMKKLITHMGEMD 167
Query: 793 SPWNCPHGRPTMRHLVDLTTIRKN 816
PWNCPHGRPTMRH+ +L I +N
Sbjct: 168 HPWNCPHGRPTMRHIANLGVISQN 191
>gi|196000426|ref|XP_002110081.1| hypothetical protein TRIADDRAFT_21244 [Trichoplax adhaerens]
gi|190588205|gb|EDV28247.1| hypothetical protein TRIADDRAFT_21244 [Trichoplax adhaerens]
Length = 832
Score = 207 bits (526), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 121/319 (37%), Positives = 176/319 (55%), Gaps = 51/319 (15%)
Query: 505 SNDLKKNSEDLSVAASHLQFSGSILDAPVPSSSLDICSTLQFSIQDLRKRRQQRLSIMQS 564
++D ++NSED+S+ P+ + S + + LQF +++RK + +
Sbjct: 562 NDDGEENSEDISL--------------PINTKSSN--NLLQFDFEEIRKIKTDQ------ 599
Query: 565 SCHTSGSVKMRRCFAAATLELSQPENEERKARALAAATTELERLFRKEDFGRMKVIGQFN 624
S + + F A P+N AA EL R K+ F M++IGQFN
Sbjct: 600 ---NSENTNIGSSFHATI----APDNN-------TAAENELRREISKDMFQEMEIIGQFN 645
Query: 625 LGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHM 684
LGFII + +QDLFI+DQHA+DEKYN+E L +T L Q L++P L LTP EE V ++
Sbjct: 646 LGFIIARHNQDLFIIDQHASDEKYNYEYLQLNTNLKGQQLIQPKHLFLTPTEEEVLMDNV 705
Query: 685 DIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSY 744
+I KNGFS DP A R ++ +VP+ + F EDV+++I L D G
Sbjct: 706 NIFEKNGFSFSIDPDAPPTKRIKMTSVPYGRGCIFNEEDVQEMIMMLTDMPG-------- 757
Query: 745 KMDTADSVC-PSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPT 803
+C P+ V M A+R+CR SIMIG AL ++M+KIL+H+ ++ PWNCPHGRPT
Sbjct: 758 ------VMCRPTTVSRMFATRSCRRSIMIGTALNTSQMKKILKHMGEIEHPWNCPHGRPT 811
Query: 804 MRHLVDLTTIRKNIDENGA 822
MRHL +L ++ E+ A
Sbjct: 812 MRHLFNLNVATVSLKEDSA 830
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 119/237 (50%), Gaps = 30/237 (12%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
+ + + Q+YA+I+ G+R C N KN + VL Q + LK+NI+ +FG + L P
Sbjct: 176 KMIHVLQSYAIISIGLRLTCNNQPVKNKRITVLSCQSNKGLKENIVDIFGPKQVSSLIPF 235
Query: 140 AI-------CKSDSCK----------VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKV 182
C+S + G +SK SGR DRQ+FF+N RP DL K
Sbjct: 236 VTHAPSESDCESMGINPKLIDMSLFSISGLISKCDHSSGRTGNDRQFFFINKRPCDLIKA 295
Query: 183 SKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEI 242
S+++NE Y N QYP ++ + DVNVTPDKR++ +E ++L ++ L +
Sbjct: 296 SRVINETYHMYNRHQYPFFALDISLRKGTVDVNVTPDKRQILMQNEKALLTVIKASLVRM 355
Query: 243 YSPNNASYSVNKVEQLIEPEKSGPSSGAESCM---FLEQLSPDGNGCIEILNEQQIS 296
Y P +SY +++ G ++GA + +Q + N I+I++E+ I+
Sbjct: 356 YDPIASSYEISR----------GITTGATTSTQSAAADQHDNENNDEIQIISEKDIN 402
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 58/73 (79%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
TI+ I++ VH+IC+GQVI +L++AVKELVENS+DAGA +++ LK+YG + +V DNG
Sbjct: 7 TIKQISQKHVHQICSGQVILNLAAAVKELVENSVDAGANQVDVRLKDYGADTVEVSDNGS 66
Query: 71 GISPNNFKVRAVF 83
GI P++F+V A+
Sbjct: 67 GIHPDDFEVLALM 79
>gi|355712463|gb|AES04355.1| PMS2 postmeiotic segregation increased 2 [Mustela putorius furo]
Length = 587
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 105/215 (48%), Positives = 136/215 (63%), Gaps = 15/215 (6%)
Query: 600 AATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVL 659
AA EL + K F M++IGQFNLGFII KL+ D+FIVDQHA DEKYNFE L Q T L
Sbjct: 385 AAEEELRKEISKAMFAEMEIIGQFNLGFIITKLNADIFIVDQHATDEKYNFEMLQQHTAL 444
Query: 660 NQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITF 719
Q L+ P L+LT E V +++I RKNGF D A R +L ++P SK TF
Sbjct: 445 QGQRLIAPQTLNLTAVNEAVLIENLEIFRKNGFDFVIDEEAPVPERAKLISLPTSKNWTF 504
Query: 720 GVEDVKDLISTLADNQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGR 778
G +D+ +LI L+D+ G +C PSRVR M ASRACR S+MIG AL
Sbjct: 505 GPQDIDELIFMLSDSPG--------------VMCRPSRVRQMFASRACRKSVMIGTALST 550
Query: 779 NEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTI 813
+EM+K++ H+ +++ PWNCPHGRPTMRH+ +L +
Sbjct: 551 SEMKKLITHMGEMDHPWNCPHGRPTMRHIANLDVL 585
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 59/98 (60%)
Query: 157 GQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNV 216
G GR+ DRQ+FF+N RP D KVS+LVNE+Y N QYP ++N V + D+NV
Sbjct: 4 AHGVGRSSTDRQFFFINGRPCDPAKVSRLVNEVYHMYNRHQYPFVVLNISVDSECVDINV 63
Query: 217 TPDKRKVFFSDECSILHALREGLQEIYSPNNASYSVNK 254
TPDKR++ +E +L L+ L ++ + SV++
Sbjct: 64 TPDKRQILLQEEKLLLAILKTSLVGMFDSDVNKLSVSQ 101
>gi|141797000|gb|AAI39775.1| Pms2 protein [Mus musculus]
Length = 191
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 102/204 (50%), Positives = 134/204 (65%), Gaps = 15/204 (7%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLT 673
F M+++GQFNLGFI+ KL +DLF+VDQHAADEKYNFE L Q TVL Q L+ P L+LT
Sbjct: 2 FAEMEILGQFNLGFIVTKLKEDLFLVDQHAADEKYNFEMLQQHTVLQAQRLITPQTLNLT 61
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
E V +++I RKNGF D A R +L ++P SK TFG +D+ +LI L+D
Sbjct: 62 AVNEAVLIENLEIFRKNGFDFVIDEDAPVTERAKLISLPTSKNWTFGPQDIDELIFMLSD 121
Query: 734 NQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLN 792
+ G +C PSRVR M ASRACR S+MIG AL +EM+K++ H+ +++
Sbjct: 122 SPG--------------VMCRPSRVRQMFASRACRKSVMIGTALNASEMKKLITHMGEMD 167
Query: 793 SPWNCPHGRPTMRHLVDLTTIRKN 816
PWNCPHGRPTMRH+ +L I +N
Sbjct: 168 HPWNCPHGRPTMRHVANLDVISQN 191
>gi|410984367|ref|XP_003998500.1| PREDICTED: mismatch repair endonuclease PMS2 [Felis catus]
Length = 880
Score = 206 bits (523), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 105/215 (48%), Positives = 136/215 (63%), Gaps = 15/215 (6%)
Query: 600 AATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVL 659
AA EL + K F M++IGQFNLGFII KL+ D+FIVDQHA DEKYNFE L Q T L
Sbjct: 677 AAEDELRKEISKTMFADMEIIGQFNLGFIITKLNADIFIVDQHATDEKYNFEMLQQHTAL 736
Query: 660 NQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITF 719
Q L+ P L+LT E + +++I RKNGF D A R +L ++P SK TF
Sbjct: 737 QGQRLIAPQTLNLTAVNEAILIENLEIFRKNGFDFVIDEGAPVTERAKLISLPTSKNWTF 796
Query: 720 GVEDVKDLISTLADNQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGR 778
G +D+ +LI L+D+ G +C PSRVR M ASRACR S+MIG AL
Sbjct: 797 GPQDIDELIFMLSDSPG--------------VMCRPSRVRQMFASRACRKSVMIGTALNT 842
Query: 779 NEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTI 813
+EM+K++ H+ +++ PWNCPHGRPTMRH+ +L I
Sbjct: 843 SEMKKLITHMGEMDHPWNCPHGRPTMRHIANLDFI 877
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/181 (39%), Positives = 101/181 (55%), Gaps = 17/181 (9%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP- 138
R V + QAY +IA G+R C+N G+ + V+ T GSSS+K+NI +VFG L P
Sbjct: 193 RMVQVLQAYCIIAAGIRVSCSNQVGQGKRQPVVCTSGSSSIKENIGSVFGQKQLQSLIPF 252
Query: 139 VAICKSDSC----------------KVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKV 182
V + SDS ++ GF+S G GR+ DRQ+FF+N RP D KV
Sbjct: 253 VQLPPSDSVCEEYGLSHGDALQTLFRISGFISHCAHGVGRSSTDRQFFFINRRPCDPAKV 312
Query: 183 SKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEI 242
S+LVNE+Y N QYP ++N V + DVNVTPDKR++ +E +L L+ L +
Sbjct: 313 SRLVNEVYHMYNRHQYPFVVLNISVDSECVDVNVTPDKRQILLQEEKLLLAVLKTSLIGM 372
Query: 243 Y 243
+
Sbjct: 373 F 373
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 55/67 (82%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+PI++ VH+IC+GQV+ LS+AVKELVENS+DAGAT+I++ LK+YG + +V DNGCG
Sbjct: 25 IKPIDRRSVHQICSGQVVLSLSTAVKELVENSVDAGATNIDLRLKDYGVDLIEVSDNGCG 84
Query: 72 ISPNNFK 78
+ NF+
Sbjct: 85 VEEENFE 91
>gi|291413733|ref|XP_002723121.1| PREDICTED: PMS2 postmeiotic segregation increased 2 [Oryctolagus
cuniculus]
Length = 867
Score = 205 bits (521), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 103/215 (47%), Positives = 137/215 (63%), Gaps = 15/215 (6%)
Query: 600 AATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVL 659
AA EL + K F M++IGQFNLGFII KL +DLFIVDQHA DEKYNFE L + TVL
Sbjct: 664 AAEEELRKEISKAMFAEMEIIGQFNLGFIITKLHEDLFIVDQHATDEKYNFEMLQRHTVL 723
Query: 660 NQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITF 719
Q L+ P L+LT E + +++I RKNGF D A R +L ++P SK TF
Sbjct: 724 QGQRLIAPQALNLTAVNEAILLENLEIFRKNGFDFVIDEAAPVTQRAKLVSLPTSKNWTF 783
Query: 720 GVEDVKDLISTLADNQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGR 778
G +D+ +LI L+D+ G +C PSRVR M ASRACR S+MIG AL
Sbjct: 784 GPQDIDELIFMLSDSPG--------------VMCRPSRVRQMFASRACRKSVMIGTALNP 829
Query: 779 NEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTI 813
+EM++++ H+ +++ PWNCPHGRPT+RH+ +L +
Sbjct: 830 SEMKQLVTHMGEMDHPWNCPHGRPTLRHIANLAVL 864
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 106/194 (54%), Gaps = 22/194 (11%)
Query: 79 VRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP 138
+ V + AY +I+ G+R CTN G+ + V+ T GSSS+K+NI VFG L P
Sbjct: 206 AKMVQVLHAYCIISTGIRVSCTNQLGQGKRQPVVCTSGSSSIKENIGCVFGQKQLQSLIP 265
Query: 139 -VAICKSDS-CK---------------VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPK 181
V + SDS C+ + GF+S+ G GR+ DRQ+FF+N RP D K
Sbjct: 266 FVQLPPSDSVCEEYGLSCSEALHNLFYISGFISQCTHGVGRSSTDRQFFFINRRPCDPAK 325
Query: 182 VSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQE 241
VS+LVNE+Y N Q+P ++N V + D+NVTPDKR++ +E +L L+ L
Sbjct: 326 VSRLVNEVYHMYNRHQHPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAILKTSLIG 385
Query: 242 IYSPNNASYSVNKV 255
++ + VNKV
Sbjct: 386 MFDSD-----VNKV 394
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 55/68 (80%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
IRPI++ VH+IC+GQV+ LS+AVKELVENS+DAGAT+I++ LK+YG + +V DNGC
Sbjct: 38 AIRPIDRKSVHQICSGQVVLSLSTAVKELVENSVDAGATNIDLRLKDYGVDLIEVSDNGC 97
Query: 71 GISPNNFK 78
G+ NF+
Sbjct: 98 GVEEGNFE 105
>gi|383853734|ref|XP_003702377.1| PREDICTED: mismatch repair endonuclease PMS2-like [Megachile
rotundata]
Length = 692
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 100/218 (45%), Positives = 137/218 (62%), Gaps = 8/218 (3%)
Query: 599 AAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTV 658
+ A EL+R KE F +M++IGQFNLGFII +L++DLFI+DQHA DEKY FE+L+ T
Sbjct: 483 STAEDELKRELTKESFLKMEIIGQFNLGFIIARLEEDLFIIDQHATDEKYRFEKLNNETQ 542
Query: 659 LNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKIT 718
L Q L+ P L+L+ E + H + NGF + + A +G R L +P S
Sbjct: 543 LKTQKLIVPKALNLSSLNETILIEHQNTFEDNGFCFKINLEAESGHRVELTGMPVSGYWQ 602
Query: 719 FGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGR 778
FG ED+++LI + + E Y+ PSRVR MLASRACRS++MIG AL
Sbjct: 603 FGQEDIEELIFLIREGGVENKENHIYR--------PSRVRQMLASRACRSAVMIGTALNN 654
Query: 779 NEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKN 816
NEMQK++ +A + +PW+CPHGRPT+RHL+ L + KN
Sbjct: 655 NEMQKLVTQMAQMENPWSCPHGRPTIRHLLSLHLVHKN 692
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 107/204 (52%), Gaps = 18/204 (8%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNT-TGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP 138
RA+ + Y +++ + C+N+ +GK+ +VV+ T SSS+ +NI VFG N L
Sbjct: 182 RAIQVLYNYCIVSTDTKITCSNSVSGKS--NVVVSTACSSSILNNINIVFGKKASNGLVK 239
Query: 139 VAICKSDSCKV---------------EGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVS 183
+ + D + E ++S GR+ DRQ+F+VN RP DL KV+
Sbjct: 240 LELLPPDEATLQEYNLANDVVIDFEWESYVSTCDHSVGRSSPDRQFFYVNGRPCDLTKVN 299
Query: 184 KLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIY 243
KL+N +Y N++QYP +N + ++ D+NVTPDKR +F + E IL L+ L ++
Sbjct: 300 KLINHIYHRYNNKQYPFIFLNLKLDKQSTDINVTPDKRTIFCTQERLILATLKFSLISVW 359
Query: 244 SPNNASYSVNKVEQLIEPEKSGPS 267
A+ ++ + +L K G S
Sbjct: 360 DKLQANLNIKPISELNFGTKRGIS 383
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 55/76 (72%), Gaps = 2/76 (2%)
Query: 5 TPTN--SPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEW 62
TPT S I INK +H+IC+GQV+ DL++A+KELVENSLD+GAT I+I LK+YG+
Sbjct: 5 TPTTEKSKKINAINKQTIHQICSGQVVFDLATAIKELVENSLDSGATLIDIKLKDYGQSC 64
Query: 63 FQVVDNGCGISPNNFK 78
+ DNG G+ +F+
Sbjct: 65 ISISDNGSGVLEEDFE 80
>gi|302683344|ref|XP_003031353.1| hypothetical protein SCHCODRAFT_16115 [Schizophyllum commune H4-8]
gi|300105045|gb|EFI96450.1| hypothetical protein SCHCODRAFT_16115 [Schizophyllum commune H4-8]
Length = 462
Score = 204 bits (519), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 103/229 (44%), Positives = 140/229 (61%), Gaps = 24/229 (10%)
Query: 597 ALAAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQ----------DLFIVDQHAADE 646
A + A L R+ K DF +M V+GQFN GFII + + DLFIVDQHA+DE
Sbjct: 227 ATSTAANALARVIDKADFAKMDVVGQFNRGFIIARRRKQPESGGSSMDDLFIVDQHASDE 286
Query: 647 KYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHA--LAGL 704
KYNFE L Q+T + Q LLRP L+LT +E++A H+D++R+NGF +E+ G
Sbjct: 287 KYNFETLQQTTKIESQRLLRPRPLELTAADEMIARDHLDVLRQNGFEVEDSGAGNDSDGA 346
Query: 705 RFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASR 764
R RL A P SK TF + D+++LI L D G ++ C S+ RAM ASR
Sbjct: 347 RLRLVAQPVSKSTTFDMRDLEELIHLLQDAPGGAAV-----------RC-SKARAMFASR 394
Query: 765 ACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTI 813
ACR S+MIG L + +M +++H+ ++ PWNCPHGRPTMRHL+DL +
Sbjct: 395 ACRKSVMIGMPLTKGQMTAVVQHMGTMDQPWNCPHGRPTMRHLIDLADL 443
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 52/67 (77%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ I+K +HRI +GQV+ DL +AVKEL+ENSLDAGAT+IE+ K +G + +VVDNG G
Sbjct: 7 IKAIDKASIHRITSGQVVIDLQTAVKELLENSLDAGATNIEVRFKNHGLKSIEVVDNGSG 66
Query: 72 ISPNNFK 78
I+ +F+
Sbjct: 67 IAEKDFE 73
>gi|426192804|gb|EKV42739.1| hypothetical protein AGABI2DRAFT_122323 [Agaricus bisporus var.
bisporus H97]
Length = 1016
Score = 202 bits (514), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 108/241 (44%), Positives = 143/241 (59%), Gaps = 29/241 (12%)
Query: 585 LSQPENEERKARALAAATTELERLFRKEDFGRMKVIGQFNLGFIIG---KLD-------Q 634
LS NE++ A L+ R+ K DF M+++GQFN GFII KLD
Sbjct: 781 LSNTNNEDKAAEVLS-------RIIDKSDFSEMELVGQFNHGFIITRRRKLDSSSSGVMD 833
Query: 635 DLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSL 694
DLFIVDQHAADEKYNFE L Q+T + Q L R L+LT EE+VA+ ++DI+RKNGF +
Sbjct: 834 DLFIVDQHAADEKYNFETLQQTTNIQSQTLFRSRPLELTASEELVATENIDILRKNGFEV 893
Query: 695 EEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCP 754
+ + AL G R L A P SK F +D+++LI+ + D V
Sbjct: 894 DVNETALPGNRLILTAQPVSKSTVFDAKDLEELINLMQDRPN------------GSMVRC 941
Query: 755 SRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIR 814
S+ RAM A RACR S+MIG +L R++M I+ H+ ++ PWNCPHGRPTMRHL DL +
Sbjct: 942 SKARAMFAMRACRKSVMIGTSLNRHQMLNIVRHMGTIDQPWNCPHGRPTMRHLADLWDVE 1001
Query: 815 K 815
+
Sbjct: 1002 R 1002
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 106/199 (53%), Gaps = 26/199 (13%)
Query: 80 RAVFLCQAYAL----IAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGM----N 131
+A+ L AYAL + G+R +N K KS VL TQG+ S++ ++ T++G N
Sbjct: 179 KALGLLNAYALLPCTVEPGIRLNVSNQPDKGAKSQVLTTQGTPSMRASVSTLWGPKALDN 238
Query: 132 IYNC---LE---------------PVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVN 173
+ + LE P+ + +V G +SK GR DRQ+F+VN
Sbjct: 239 VVDLDLRLEVERERGNKRTISQALPLTDDEPLQVRVRGLISKFSVSCGRTGTDRQFFYVN 298
Query: 174 DRPVDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILH 233
RP L KV K NE+Y+ N Q + +F++PT ACDVNV+PDKR +F E +++
Sbjct: 299 GRPCTLNKVQKAFNEVYRSFNPNQSAFIVADFVIPTAACDVNVSPDKRTIFLHSESNLIA 358
Query: 234 ALREGLQEIYSPNNASYSV 252
AL+E L+ ++P +++ V
Sbjct: 359 ALKEALERNFNPERSTFEV 377
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 54/69 (78%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
+I+PI+K VHRI +GQV+ D+ +AVKEL+ENSLDAGAT+I++ K+YG +VVDNG
Sbjct: 10 SIKPIDKTSVHRITSGQVVIDIQTAVKELIENSLDAGATNIDVRFKQYGLTSIEVVDNGS 69
Query: 71 GISPNNFKV 79
GI+ + +V
Sbjct: 70 GIAEKDHEV 78
>gi|254572842|ref|XP_002493530.1| ATP-binding protein required for mismatch repair in mitosis and
meiosis [Komagataella pastoris GS115]
gi|238033329|emb|CAY71351.1| ATP-binding protein required for mismatch repair in mitosis and
meiosis [Komagataella pastoris GS115]
gi|328354646|emb|CCA41043.1| Mismatch repair endonuclease PMS2 [Komagataella pastoris CBS 7435]
Length = 903
Score = 201 bits (512), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 173/300 (57%), Gaps = 32/300 (10%)
Query: 535 SSSLDICSTLQFSIQDLRKRRQQRLSIMQSSCHTSGSV-----KMRRCFAAATLELSQPE 589
+S +D+ ++ ++ L R +RL+ S G+V K+ + FA+ T L
Sbjct: 608 TSEIDLLASYSSTVPILNFSRAKRLN----SQRYVGTVAIESQKIAQQFASNTSRLINAV 663
Query: 590 NEERKARALA--------AATTELERLFRKEDFGRMKVIGQFNLGFII-------GKLDQ 634
+ E+ + +A A L K DF +MKV+GQFNLGFII GK Q
Sbjct: 664 DSEKTSLEVAKDDITDKEVAEEALTMRVSKTDFLKMKVVGQFNLGFIIVTKKSTEGK--Q 721
Query: 635 DLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSL 694
DLFIVDQHA+DEKYNFE ++T QPL+ P ++L +EV+ +++I KNGFS+
Sbjct: 722 DLFIVDQHASDEKYNFENFQKNTQFLSQPLVVPQFIELNLLDEVLVQDNIEIFSKNGFSI 781
Query: 695 EEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCP 754
+ AG R +L ++P SK F + D +L+ L +NQG IS K + V P
Sbjct: 782 KFQEENEAGKRIQLLSIPMSKGTVFDIADFHELVHLLKENQG----IS--KENLLAHVRP 835
Query: 755 SRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIR 814
S++R+M A RACR+SIMIG +L M +++ HL+ L+ PWNCPHGRPTMRHL++L+ ++
Sbjct: 836 SKIRSMFAMRACRASIMIGKSLSMKTMTRVVHHLSGLDKPWNCPHGRPTMRHLIELSDLK 895
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 67/164 (40%), Positives = 93/164 (56%), Gaps = 9/164 (5%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICK 143
+ Q+YA+I R + + T K K+ +L TQG+S LK N++ VFG N L P+ I
Sbjct: 174 VLQSYAVINTQRRIMVNHITAKGKKNQMLATQGAS-LKGNLVNVFGAGALNGLIPINIQL 232
Query: 144 SDSCK--------VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANS 195
S S K VEG++S G GR DRQ FF+N RPVDL ++SK +NE YK N
Sbjct: 233 SISAKYSEEFELSVEGYISNCSFGQGRASSDRQLFFINGRPVDLAQLSKKINEAYKTFNH 292
Query: 196 RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGL 239
QYP+ ++N + D+NVTPDKR + E +L +L + L
Sbjct: 293 LQYPMVVLNLKLDPNYLDINVTPDKRTIMIHHEDQVLESLIDAL 336
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 52/77 (67%), Gaps = 4/77 (5%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I I++ H++ +GQ+I DL++AVKELVEN++DA ++ I+I +K+YG + QV D+G G
Sbjct: 2 ITQISEKDAHKLSSGQLIIDLTAAVKELVENAIDANSSQIQITIKDYGLDSIQVSDDGVG 61
Query: 72 ISPNNFKVRAVFLCQAY 88
IS + F+C Y
Sbjct: 62 ISVEDHP----FVCSPY 74
>gi|336369197|gb|EGN97539.1| hypothetical protein SERLA73DRAFT_56795 [Serpula lacrymans var.
lacrymans S7.3]
gi|336381986|gb|EGO23137.1| hypothetical protein SERLADRAFT_471892 [Serpula lacrymans var.
lacrymans S7.9]
Length = 313
Score = 201 bits (512), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 109/242 (45%), Positives = 147/242 (60%), Gaps = 31/242 (12%)
Query: 585 LSQPENEERKARALAAATTELERLFRKEDFGRMKVIGQFNLGFII----------GKLDQ 634
L+ E++E+ AT L R KEDF MKV+GQFNLGFII G LD
Sbjct: 77 LTNTEDDEK-------ATAALSRTIGKEDFDTMKVLGQFNLGFIIARRQKSMEAEGDLD- 128
Query: 635 DLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSL 694
DLFI+DQHAADEKYNFE L Q+TV+ Q L RP L+L+ +E+VA +++I+++NGF +
Sbjct: 129 DLFIIDQHAADEKYNFETLQQTTVIESQKLFRPRVLELSAADELVAVENLEILQRNGFDV 188
Query: 695 E-EDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVC 753
+ +D + G R +L A P SK F ++D+++LI L D + C
Sbjct: 189 QADDATSGPGSRLQLLAQPVSKNTQFDIKDLEELIHLLQDRPAGTMV-----------RC 237
Query: 754 PSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTI 813
S+ RAM A RACR SIM+G L N+M ++ H+ ++ PWNCPHGRPTMRHL DL I
Sbjct: 238 -SKARAMFAMRACRKSIMVGMPLTHNQMTSVVRHMGTMDQPWNCPHGRPTMRHLSDLRNI 296
Query: 814 RK 815
R+
Sbjct: 297 RE 298
>gi|66810241|ref|XP_638844.1| MutL DNA mismatch repair protein [Dictyostelium discoideum AX4]
gi|74854421|sp|Q54QA0.1|PMS1_DICDI RecName: Full=Mismatch repair endonuclease pms1
gi|60467455|gb|EAL65478.1| MutL DNA mismatch repair protein [Dictyostelium discoideum AX4]
Length = 1022
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 111/245 (45%), Positives = 151/245 (61%), Gaps = 15/245 (6%)
Query: 570 GSVKMRRCFAAATLELSQPENEERKARALAAATTELERLFRKEDFGRMKVIGQFNLGFII 629
G + ++ AAT SQ + + + A EL + F+KE F +M VIGQFNLGFII
Sbjct: 768 GGIGAKQQQKAATQVTSQLQQQPSQTNQ-KTAEEELTKFFKKEYFKQMIVIGQFNLGFII 826
Query: 630 GKLDQDLFIVDQHAADEKYNFERLSQS--TVLNQQPLLRPLKL-DLTPEEEVVASMHMDI 686
KL DLFI+DQHAADEKYNFE LS+S + +N QPLL+P L DLT EEE++ ++D+
Sbjct: 827 AKLGNDLFIIDQHAADEKYNFEILSKSVESSINSQPLLKPDTLSDLTSEEELIIIENVDL 886
Query: 687 IRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKM 746
+KNGF D A + +L A P +FG++D+ + I + E SI S
Sbjct: 887 FKKNGFKFIIDHDAPTRFKIKLSAFPIIHGQSFGIKDIYEWIFMIK----ESSIPGSVNK 942
Query: 747 DTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRH 806
P R+ ++LAS+ACR SIM+G L EM+ +L +L+ L++PW CPHGRPTMRH
Sbjct: 943 ------IP-RLNSLLASKACRKSIMVGTTLTHKEMKDVLNNLSTLDNPWCCPHGRPTMRH 995
Query: 807 LVDLT 811
LVDL+
Sbjct: 996 LVDLS 1000
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/217 (33%), Positives = 105/217 (48%), Gaps = 44/217 (20%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICK 143
+ QAYALI+ R C N GK+ +S VL T S+++DN+I VFG + L+
Sbjct: 174 ILQAYALISTNTRITCYNQAGKSPRSCVLSTTSGSTIRDNLINVFGTKMSQSLD--EFTA 231
Query: 144 SDSC-KVEGFLSKPGQGSG----------------------------------------R 162
SDS KV G +SK G GSG R
Sbjct: 232 SDSLFKVNGLISKIGIGSGTGQSISNSSSSSSQSSSQLSSSSSSSSSSQSSQLSIGSLSR 291
Query: 163 NLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSR-QYPIAIMNFIVPTRACDVNVTPDKR 221
+ DRQ+FFVN RP + K++K +N LY+ + R YP+ I N +PT DVNVTPDKR
Sbjct: 292 SCADRQFFFVNSRPFEHSKLAKEINSLYQSFHKRGSYPVVIFNIEMPTNNYDVNVTPDKR 351
Query: 222 KVFFSDECSILHALREGLQEIYSPNNASYSVNKVEQL 258
+F E +L + +GL+ ++ + + N++ Q
Sbjct: 352 TIFIQKEQQLLLLITDGLKTMWETAQSVFDTNQLGQF 388
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 56/66 (84%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ I+K ++ IC+GQVI DLS AVKEL+ENS+DAGAT++EI LKEYGEE+ +V+DNG G
Sbjct: 2 IKAIDKESINNICSGQVIFDLSIAVKELIENSIDAGATTVEIRLKEYGEEFIEVIDNGSG 61
Query: 72 ISPNNF 77
+ P+NF
Sbjct: 62 VEPSNF 67
>gi|345305110|ref|XP_001512507.2| PREDICTED: mismatch repair endonuclease PMS2 [Ornithorhynchus
anatinus]
Length = 895
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 102/218 (46%), Positives = 136/218 (62%), Gaps = 15/218 (6%)
Query: 600 AATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVL 659
AA EL + KE F +M++IGQFNLGFII KL+ DLFI+DQHA DEKYNFE L +V
Sbjct: 692 AAEDELRKEISKEMFTQMEIIGQFNLGFIITKLNADLFIIDQHATDEKYNFEMLQLHSVP 751
Query: 660 NQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITF 719
Q L+ P L+LT E + +++I +KNGF D A R +L ++P SK TF
Sbjct: 752 QGQRLIVPQNLNLTAVNEAILIENLEIFKKNGFDFIIDEKAPVTERVKLISLPTSKNWTF 811
Query: 720 GVEDVKDLISTLADNQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGR 778
G +D+ ++I L+D G +C PSRVR M ASRACR S+MIG AL
Sbjct: 812 GPQDIDEMIFMLSDCPG--------------VMCRPSRVRQMFASRACRKSVMIGTALNT 857
Query: 779 NEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKN 816
EM+K++ H++++ PWNCPHGRPTMRH+ L I ++
Sbjct: 858 IEMKKLITHMSEIEHPWNCPHGRPTMRHIASLDMISQD 895
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 112/223 (50%), Gaps = 17/223 (7%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
+ V + QAY +I+ G+R CTN G+ + V+ T G+S++K+NI VFG L
Sbjct: 201 KMVQVLQAYCIISAGIRINCTNQVGQGKRQPVVCTNGNSTVKENIGAVFGQKQLQSLISF 260
Query: 140 -------AICKSDSCK----------VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKV 182
++C+ K + GF+S+ G GR+ +RQ++F+N RP D KV
Sbjct: 261 VQLPPSESVCEEYGLKFSDAPHNFYTITGFISRCDHGVGRSTTERQFYFINQRPCDPAKV 320
Query: 183 SKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEI 242
S+LVNE+Y N QYP ++N V + D+NVTPDKR++ E +L L+ L +
Sbjct: 321 SRLVNEVYHTYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQKEKLLLAVLKTSLLGM 380
Query: 243 YSPNNASYSVNKVEQLIEPEKSGPSSGAESCMFLEQLSPDGNG 285
+ + ++N+ L P S LE+ SP G
Sbjct: 381 FDSDVNKLNINQKLLLDVGVSLKPRSAEMGTPALEEWSPRTKG 423
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 54/66 (81%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+PI++ VH+IC+GQV+ +L +AVKELVENS+DAGAT+I++ LKEYG + +V DNGCG
Sbjct: 33 IKPIDRKSVHQICSGQVVLNLGTAVKELVENSVDAGATNIDLKLKEYGADLIEVSDNGCG 92
Query: 72 ISPNNF 77
+ NF
Sbjct: 93 VEEENF 98
>gi|296412633|ref|XP_002836027.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629827|emb|CAZ80184.1| unnamed protein product [Tuber melanosporum]
Length = 1023
Score = 200 bits (508), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 93/200 (46%), Positives = 133/200 (66%), Gaps = 12/200 (6%)
Query: 611 KEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKL 670
K+DF M++ GQFN GFI+ DLFI+DQHA+DEKYNFE+L Q T++ Q L P KL
Sbjct: 800 KQDFFEMQIKGQFNKGFILATRADDLFIIDQHASDEKYNFEKLQQVTIVQNQRLAVPKKL 859
Query: 671 DLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIST 730
DL +E+V H+D +KNGF +E D A G + +L ++P SK+ FG++D+++LI
Sbjct: 860 DLMAVDEIVVIDHIDTFKKNGFVIEVDTGAPVGEKCKLISLPISKETVFGLDDLEELIHL 919
Query: 731 LADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLAD 790
++++ G ++ C S+VR M A RACR S+M+G AL M+K+++H+ +
Sbjct: 920 ISEDPGNSAV-----------RC-SKVRKMFAMRACRKSVMVGKALTEKGMEKLVKHMGE 967
Query: 791 LNSPWNCPHGRPTMRHLVDL 810
L+ PWNCPHGRPTMRHL DL
Sbjct: 968 LDKPWNCPHGRPTMRHLSDL 987
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 100/195 (51%), Gaps = 17/195 (8%)
Query: 79 VRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP 138
+ + + QAYA + GV+F N K ++ V T+G+ ++++N+ VFG + L P
Sbjct: 173 TKVLGILQAYAGVCVGVKFSVFNQPAKGRRTPVFATKGNPTVRENVSNVFGAKALSALVP 232
Query: 139 V----------------AICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKV 182
+ A K+ GF+S+P G GR DRQ FFVN RP LP+V
Sbjct: 233 MNLEFEMKPTRKGFQKAAKPSEKMIKIVGFISRPVVGEGRLAPDRQMFFVNGRPCMLPQV 292
Query: 183 SKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEI 242
++ +NE+YK N Q P + + T A DVNV+PDKR + D+ ++ +L+ L ++
Sbjct: 293 ARAINEVYKHFNVTQSPFIFADIQLDTNAYDVNVSPDKRTILLHDQAEMMESLKVSLTDL 352
Query: 243 YSPNNASYSVNKVEQ 257
+ N+ N V Q
Sbjct: 353 FD-NHEQTVPNSVTQ 366
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/69 (57%), Positives = 50/69 (72%), Gaps = 1/69 (1%)
Query: 11 TIRPINKGVVHRICAGQVIKD-LSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNG 69
TIRPI VH+I +GQVI + L+S VKELVEN LDA ATSIE+ K G + +V+DNG
Sbjct: 3 TIRPIEGRSVHQIQSGQVISEGLTSVVKELVENGLDAHATSIEVRFKSNGLDAIEVIDNG 62
Query: 70 CGISPNNFK 78
GISP N++
Sbjct: 63 DGISPENYE 71
>gi|412993378|emb|CCO16911.1| predicted protein [Bathycoccus prasinos]
Length = 906
Score = 199 bits (506), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 110/231 (47%), Positives = 141/231 (61%), Gaps = 25/231 (10%)
Query: 599 AAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQ-DLFIVDQHAADEKYNFERLSQST 657
AAAT L R F K +F ++V+GQFNLGFII D D+FIVDQHA+DE YNFERL ++T
Sbjct: 674 AAATNALIRRFDKSEFANVRVVGQFNLGFIIVVRDNTDIFIVDQHASDEIYNFERLQKTT 733
Query: 658 VLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSL---EEDPHALAG-----LRFRLK 709
LN+QPL++P +L+L+P EE +A + NGF P G R L
Sbjct: 734 TLNKQPLIQPQRLELSPAEEQIARSNEKTFLMNGFGFCDVATSPPNFPGDESSSSRLALA 793
Query: 710 AVPFSKKITFGVEDVKDLISTLADNQGECSI-------ISSYKMDTADS-------VCPS 755
AVPFSK F DV +L++ L ++GE ++ + K AD+ + PS
Sbjct: 794 AVPFSKDTVFDASDVHELVAML--DEGEYAVPVRSQLSVGLLKNSAADAGGSTKTVLRPS 851
Query: 756 RVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRH 806
+VR MLA RACRSSIMIG L R M+KIL++L+ L PWNCPHGRPTMRH
Sbjct: 852 KVRNMLAMRACRSSIMIGQPLSRRRMKKILQNLSALERPWNCPHGRPTMRH 902
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 97/206 (47%), Gaps = 46/206 (22%)
Query: 84 LCQAYALIAK--GVRFVCTNTTGKN-VKSVVLKTQ------GSSSLKDNIITVFGMNIYN 134
+ Q YAL ++ G RFV T+ GKN + VL+ + G +D + +VFG
Sbjct: 183 VLQGYALASETSGCRFVATHQQGKNGARQTVLQCRASVSNGGGGGFRDRVASVFGARTAE 242
Query: 135 CLEPVAIC-----KSDSC------------------------KVEGFLSKPG----QGSG 161
+ + I +D + G++S PG + S
Sbjct: 243 SVFEIDIGLEREKSADEILEEEVKEEEEDVEDVDNDDDDRFGRCTGWVSLPGLENKKTSA 302
Query: 162 RNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSR----QYPIAIMNFIVPTRACDVNVT 217
R DRQ+F+VN RPVD PK++K +NE ++ N+ YP +NF VP DVNV+
Sbjct: 303 RASADRQFFYVNGRPVDYPKIAKTLNETFRAYNATTTNANYPSCALNFEVPKHLVDVNVS 362
Query: 218 PDKRKVFFSDECSILHALREGLQEIY 243
PDKR V F++E IL R G+++ +
Sbjct: 363 PDKRTVMFTNEHDILMYFRNGIKKAF 388
Score = 82.8 bits (203), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 57/83 (68%), Gaps = 4/83 (4%)
Query: 7 TNSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVV 66
T + TI+ I+ VHRIC+GQVI D+SS KEL+ENS DAGAT++EI ++E+G E +V
Sbjct: 4 TRTATIQSIDPSSVHRICSGQVILDISSCAKELIENSADAGATNVEIRMREFGLESVEVS 63
Query: 67 DNGCGISPNNFKVRAVFLCQAYA 89
DNG G++ + K+ L YA
Sbjct: 64 DNGSGVAREDVKM----LTMKYA 82
>gi|328866647|gb|EGG15030.1| MutL DNA mismatch repair protein [Dictyostelium fasciculatum]
Length = 996
Score = 199 bits (506), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 101/221 (45%), Positives = 139/221 (62%), Gaps = 14/221 (6%)
Query: 600 AATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVL 659
A EL +KEDF RM+VIGQFN FII +LD DLFIVDQHAADEKYN+E L +S L
Sbjct: 772 VAEKELSLHIKKEDFLRMQVIGQFNNSFIIARLDTDLFIVDQHAADEKYNYETLQKSHEL 831
Query: 660 NQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITF 719
QPL+RP + LT E+E + H+D+ +KNGF + + +A R ++ ++PFS+K TF
Sbjct: 832 ISQPLIRPTHIQLTDEDEEILIDHLDLFKKNGFIFDVNRNAPPTKRVKIVSLPFSRKWTF 891
Query: 720 GVEDVKDLISTLADNQGECSIISSYKMDTADSVCP-SRVRAMLASRACRSSIMIGDALGR 778
G D+ +LI + K VC R+ AM ASRAC+ SI++G L
Sbjct: 892 GPNDIYELIFMI-------------KESLPGQVCRLPRISAMFASRACKKSIVVGMPLTH 938
Query: 779 NEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKNIDE 819
+M+K+L +L+ L +PW CPHGRPTMRHL +LT + +++
Sbjct: 939 EQMRKVLSNLSQLENPWCCPHGRPTMRHLNNLTKTNQIVED 979
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 102/192 (53%), Gaps = 26/192 (13%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICK 143
+ Q+YA+I+ GVR C NT KN + +V T G + +KDN++++FG L+ + + +
Sbjct: 209 ILQSYAVISTGVRISCYNTV-KNSRQLVFSTSGCNDIKDNVVSLFGKQA-QMLDRIDV-E 265
Query: 144 SDSCKVEGFLSKPGQGSG----------------------RNLGDRQYFFVNDRPVDLPK 181
++ V+G +SK GQ +G R+ GDRQ+ F+N RPVD P
Sbjct: 266 NELFHVKGLVSKVGQLNGVGSVVGSQTAAGGNGGLNAQMARSCGDRQFIFINGRPVDFPA 325
Query: 182 VSKLVNELYKGANSR-QYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQ 240
++K VN +Y + YP+ ++ + DVNVTPDKRKVF E +L + + L+
Sbjct: 326 LTKTVNSMYHSFQKKGSYPVLFLDIKMNPNTYDVNVTPDKRKVFIQKEEILLTLIGDHLK 385
Query: 241 EIYSPNNASYSV 252
+ +++ V
Sbjct: 386 SHWEKAQSTFDV 397
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 53/66 (80%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ I+K VH+IC+GQVI DLS+AVKELVENSLDA AT +EI LKEYGE+ +V+DNG G
Sbjct: 37 IKAIDKDSVHQICSGQVILDLSTAVKELVENSLDAKATKVEIRLKEYGEDAIEVIDNGSG 96
Query: 72 ISPNNF 77
+ N+
Sbjct: 97 VEAANY 102
>gi|392588692|gb|EIW78024.1| hypothetical protein CONPUDRAFT_61519 [Coniophora puteana
RWD-64-598 SS2]
Length = 326
Score = 199 bits (505), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 104/250 (41%), Positives = 144/250 (57%), Gaps = 44/250 (17%)
Query: 599 AAATTELERLFRKEDFGRMKVIGQFNLGFII----------------------------- 629
A A+ L R+ RK DFG M+++GQFNLGFI+
Sbjct: 69 AKASATLSRIIRKSDFGEMEILGQFNLGFIVARRRALASDALPGGDVDGGGGDPASAASA 128
Query: 630 GKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRK 689
G LD DLFIVDQHAADEKYNFE L Q+T + Q L RP L+LT +E++A ++D++R+
Sbjct: 129 GSLD-DLFIVDQHAADEKYNFETLQQTTNIQSQKLFRPQPLELTAADELLAMENIDVLRQ 187
Query: 690 NGFSLE--EDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMD 747
NGF ++ EDP A +G R L A P SK F + D++++I + D +
Sbjct: 188 NGFEVDHIEDPEAASGSRLCLVAQPVSKSTVFDMRDLEEIIHLMQDRPKGTMV------- 240
Query: 748 TADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHL 807
C S+ RAM A RACR SIM+G L + +M ++ H+ ++ PWNCPHGRPTMRHL
Sbjct: 241 ----RC-SKARAMFAMRACRKSIMVGKPLTQAQMTTVVRHMGTMDQPWNCPHGRPTMRHL 295
Query: 808 VDLTTIRKNI 817
VD+ T++ +
Sbjct: 296 VDVQTVKSKM 305
>gi|391332380|ref|XP_003740613.1| PREDICTED: mismatch repair endonuclease PMS2 [Metaseiulus
occidentalis]
Length = 841
Score = 199 bits (505), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 105/218 (48%), Positives = 133/218 (61%), Gaps = 10/218 (4%)
Query: 596 RALAAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQ 655
R + A +EL R K+ F M +IGQFN GFII KL+ DLFIVDQHAADEK+NFE L
Sbjct: 632 RENSTAESELMREITKDMFKDMDIIGQFNKGFIIAKLNTDLFIVDQHAADEKFNFETLQA 691
Query: 656 STVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSK 715
+TV+ QPL PLKL L P E V ++ I KNGF L D AL G + L AVP S
Sbjct: 692 TTVIESQPLAIPLKLFLAPGNEQVVLENLPIFEKNGFRLSCDEDALCGRKLSLTAVPQSG 751
Query: 716 KITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDA 775
+ G D+ +LI L +N +M+ PS+VRAM A RACR S+M+G
Sbjct: 752 QWAMGASDIDELIFMLNEN------YHPNRMNCR----PSKVRAMFAMRACRKSVMVGHE 801
Query: 776 LGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTI 813
L +M++++ L+ L PWNCPHGRPTMRHLV+L +
Sbjct: 802 LRPRDMKRVVSQLSGLQHPWNCPHGRPTMRHLVNLNLV 839
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/199 (36%), Positives = 99/199 (49%), Gaps = 21/199 (10%)
Query: 75 NNFK---VRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMN 131
NN K + V Y LIA+ V TN + + VLK + SS KDNII +FG
Sbjct: 176 NNLKKEFTKMVHFMSGYCLIARDVAISLTNIDERGKRHDVLKKRAHSSFKDNIIEIFGFK 235
Query: 132 IYNCLEPVA-ICKSDSCK-----------------VEGFLSKPGQGSGRNLGDRQYFFVN 173
+ L P A I S+ K VEGF+S GSGR+ DRQ+ FVN
Sbjct: 236 EASRLLPYAQITISEEIKQEFGLGNVSTEHFDEVTVEGFVSSSEHGSGRSSADRQFIFVN 295
Query: 174 DRPVDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILH 233
RP D PK+++++N +Y NS QYP ++N + P DVN+TPDKR + E IL
Sbjct: 296 SRPCDFPKLTRVINGVYHQFNSSQYPFVMLNIMTPRHLVDVNLTPDKRMLMLQRENVILA 355
Query: 234 ALREGLQEIYSPNNASYSV 252
++ L ++ Y+V
Sbjct: 356 MVKASLTLMFQKQATRYAV 374
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I ++ VHRIC+GQVI L+ AVKELVEN+LDAGA I I KE+G + +V DNG G
Sbjct: 16 IGKLDSWSVHRICSGQVIVCLAVAVKELVENALDAGAKEIVIRTKEFGSKLIEVQDNGDG 75
Query: 72 ISPNNFKVRAVFLCQAY 88
I NF LC+ +
Sbjct: 76 IREENFDA----LCRKH 88
>gi|378731535|gb|EHY57994.1| DNA mismatch repair protein PMS2 [Exophiala dermatitidis NIH/UT8656]
Length = 1035
Score = 199 bits (505), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 107/244 (43%), Positives = 145/244 (59%), Gaps = 27/244 (11%)
Query: 591 EERKARALAAAT------TELERLFRKEDFGRMKVIGQFNLGFIIG-------------K 631
EE A+ L A+ T+L K DF RM ++GQFNLGFI+ K
Sbjct: 767 EESAAQELPASNDDADPETQLSLTVSKADFARMDIVGQFNLGFILAVRPAQRSCHDGKQK 826
Query: 632 LDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNG 691
+LFI+DQHA+DEKYNFERL TV+ Q L++P LDLT EE + + D + KNG
Sbjct: 827 GRDELFIIDQHASDEKYNFERLQAETVVGNQRLVQPAILDLTAVEEEIVLENKDALEKNG 886
Query: 692 FSLEED--PHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTA 749
F ++ D ++ G R RL ++P SK++ F +D+++LI LA+ QG S A
Sbjct: 887 FIVDIDMSGESMVGQRCRLVSLPLSKEVVFTTQDLEELIHLLAEAQGVGS------EHGA 940
Query: 750 DSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVD 809
PS+VR M A RACRSSIMIG L + +M+K++ H+ ++ PWNCPHGRPTMRHL
Sbjct: 941 GVPRPSKVRKMFAMRACRSSIMIGKTLSKKQMEKVVTHMGTIDKPWNCPHGRPTMRHLCS 1000
Query: 810 LTTI 813
LT +
Sbjct: 1001 LTDL 1004
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 91/179 (50%), Gaps = 15/179 (8%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
+ + L QAYA ++ V+F NT K V T+ +++ ++NI V+G L P+
Sbjct: 173 KVLGLLQAYACVSVNVKFTVKNTMPKGKSVTVFSTKSNATTRENIANVYGAKTLAALAPL 232
Query: 140 -----------AICKSDSCK----VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSK 184
+ D + V G +SKP G GR DRQ FFVN RP LP+++K
Sbjct: 233 DLELDFRPTLTQLVHKDKARSKIHVRGHISKPVFGEGRQTPDRQMFFVNGRPCGLPQIAK 292
Query: 185 LVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIY 243
+NE+YK N Q P + + T A DVNV+PDKR + D +++ L+ L E++
Sbjct: 293 AINEVYKAFNVTQSPFIFADLQMDTNAYDVNVSPDKRTILLHDSAALIENLKTALNEMF 351
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 49/68 (72%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
TI+PI VH+I +GQVI DL S KELVENSLDAGATS+E+ K G + +V DNG
Sbjct: 3 TIKPIEAKSVHQIQSGQVIVDLCSVAKELVENSLDAGATSVEVRFKNNGLDAIEVQDNGS 62
Query: 71 GISPNNFK 78
GISP N++
Sbjct: 63 GISPANYE 70
>gi|340710084|ref|XP_003393628.1| PREDICTED: mismatch repair endonuclease PMS2-like [Bombus
terrestris]
Length = 692
Score = 198 bits (504), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 111/277 (40%), Positives = 157/277 (56%), Gaps = 25/277 (9%)
Query: 540 ICSTLQFSIQDLRKRRQ-QRLSIMQSSCHTSGSVKMRRCFAAATLELSQPENEERKARAL 598
I T+Q SI L ++Q Q + S C S + R F A + S ENE
Sbjct: 440 ILGTVQMSISILAIKQQLQEKQNLLSKCVISNT---RIKFKAQMDQNSNAENE------- 489
Query: 599 AAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTV 658
L++ K+ F M++IGQFNLGFII +L +DLFI+DQHA DEKY FE+L+ T
Sbjct: 490 ------LKKQLTKDSFFEMEIIGQFNLGFIITRLKEDLFIIDQHATDEKYRFEKLNNETQ 543
Query: 659 LNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKIT 718
L Q L+ P L+++P E + H NGF L+ D +G R +L +P S
Sbjct: 544 LRTQKLIIPKFLNISPLNETILIEHQKTFEDNGFFLKIDSEGESGHRVQLTGIPVSGHWQ 603
Query: 719 FGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGR 778
FG +D+++LI + + E S+++ PSRVR MLAS+ACR ++MIG AL
Sbjct: 604 FGQDDIEELIFLIREGGIENQKNSTFR--------PSRVRQMLASKACRKAVMIGMALNN 655
Query: 779 NEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRK 815
N+M K++ +A++ +PWNCPHGRPT+RHL+ L I K
Sbjct: 656 NDMHKLITQMAEMENPWNCPHGRPTIRHLLSLNLIYK 692
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 97/195 (49%), Gaps = 15/195 (7%)
Query: 79 VRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP 138
+RA+ + +Y L++ + C+N ++V+ T S++ NI +FG N L
Sbjct: 181 IRAIQVLYSYCLVSTNTKITCSNCVSDKSPNLVINTVSPSNILSNINLIFGKKSSNGLIK 240
Query: 139 VAICKSDSCKVEGF---------------LSKPGQGSGRNLGDRQYFFVNDRPVDLPKVS 183
+ + D ++ + +S GR+ DRQ+F+VN RP DL KVS
Sbjct: 241 IELLPPDEATLQEYNLSSNVVVDFEWDCYISSCDHDIGRSAPDRQFFYVNGRPCDLTKVS 300
Query: 184 KLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIY 243
KL+N++Y N++QYP +N + + D+NVTP+KR +F + E IL L+ L +
Sbjct: 301 KLINQIYHKYNNKQYPFIFLNLKLNKHSTDINVTPNKRVIFCTQENLILATLKYNLSSRW 360
Query: 244 SPNNASYSVNKVEQL 258
+ + N V +L
Sbjct: 361 DKLQGNLTANPVPEL 375
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 54/76 (71%)
Query: 3 VETPTNSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEW 62
+ + S I I+K +H+IC+GQVI DL++AVKELVENSLD+GAT I+I LK+YG+
Sbjct: 5 ISSSEKSKKINVISKQTIHQICSGQVIFDLATAVKELVENSLDSGATLIDIKLKDYGKTC 64
Query: 63 FQVVDNGCGISPNNFK 78
V DNG G+ +F+
Sbjct: 65 ISVSDNGSGVLEQDFE 80
>gi|350413845|ref|XP_003490132.1| PREDICTED: mismatch repair endonuclease PMS2-like [Bombus
impatiens]
Length = 692
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 94/215 (43%), Positives = 135/215 (62%), Gaps = 8/215 (3%)
Query: 601 ATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLN 660
A EL++ K+ F +M++IGQFNLGFII +L +DLFI+DQHA DEKY FE+L+ T L
Sbjct: 486 AENELKKQLTKDSFFQMEIIGQFNLGFIITRLKEDLFIIDQHATDEKYRFEKLNNETQLR 545
Query: 661 QQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFG 720
Q L+ P L+++P E + H NGF + D +G R +L +P S FG
Sbjct: 546 TQKLIIPKFLNISPLNETILIEHQKTFEDNGFFFKIDSEGESGHRVQLTGIPVSGHWQFG 605
Query: 721 VEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNE 780
+D+++LI + + E S+++ PSRVR MLAS+ACR ++MIG AL N+
Sbjct: 606 QDDIEELIFLIREGGIENQKNSTFR--------PSRVRQMLASKACRKAVMIGTALNNND 657
Query: 781 MQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRK 815
M K++ +A++ +PWNCPHGRPT+RHL+ L I K
Sbjct: 658 MHKLITQMAEMENPWNCPHGRPTIRHLLSLNLIYK 692
Score = 109 bits (272), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 99/195 (50%), Gaps = 15/195 (7%)
Query: 79 VRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP 138
+RA+ + +Y L++ + C+N ++V+ T S++ NI +FG N L
Sbjct: 182 IRAIQVLYSYCLVSTNTKITCSNCVSDKSPNLVINTVSPSNILSNINLIFGKKSSNGLIK 241
Query: 139 VAICKSDSCKVEGF---------------LSKPGQGSGRNLGDRQYFFVNDRPVDLPKVS 183
+ + D ++ + +S GR+ DRQ+F+VN RP DL KVS
Sbjct: 242 IELLPPDEATLQEYNLSSNVVVDFEWDCYISSCDHDVGRSAPDRQFFYVNGRPCDLTKVS 301
Query: 184 KLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIY 243
KL+N++Y N++QYP +N + + D+NVTP+KR +FF+ E IL L+ L +
Sbjct: 302 KLINQIYHKYNNKQYPFIFLNLKLNKHSTDINVTPNKRIIFFTQENLILATLKYNLSSRW 361
Query: 244 SPNNASYSVNKVEQL 258
+ +VN V +L
Sbjct: 362 DKLQGNLTVNPVPEL 376
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 54/76 (71%)
Query: 3 VETPTNSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEW 62
+ + S I I+K +H+IC+GQVI DL++AVKELVENSLD+GAT I+I LK+YG+
Sbjct: 6 ISSSEKSKKINVISKQTIHQICSGQVIFDLATAVKELVENSLDSGATLIDIKLKDYGKTC 65
Query: 63 FQVVDNGCGISPNNFK 78
V DNG G+ +F+
Sbjct: 66 ISVSDNGSGVLEQDFE 81
>gi|170111216|ref|XP_001886812.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164638170|gb|EDR02449.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 269
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 106/249 (42%), Positives = 146/249 (58%), Gaps = 39/249 (15%)
Query: 585 LSQPENEERKARALAAATTELERLFRKEDFGRMKVIGQFNLGFIIGK------------- 631
+S EN++R ALA R+ KEDF M V+GQFNLGFII +
Sbjct: 23 VSNTENDDRAVDALA-------RVIEKEDFASMDVVGQFNLGFIIARRRKDASPSPSRSI 75
Query: 632 -----LDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDI 686
+ DLFIVDQHA+DEKYNFE L +T + Q L RP L+LT +E++A+ ++++
Sbjct: 76 SQELQVMDDLFIVDQHASDEKYNFETLQLTTRIQSQKLFRPQPLELTAADELLATENIEV 135
Query: 687 IRKNGFSLEEDPHALAGLRFRLKAV--PFSKKITFGVEDVKDLISTLADNQGECSIISSY 744
+R+NGF +E D +G RLK V P SK FG++D++++I + D
Sbjct: 136 LRQNGFEIEVDDSECSGQGSRLKLVAQPISKSTVFGMKDLEEIIHLMRDRP--------- 186
Query: 745 KMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTM 804
T V S+ RAM A RACR S+MIG L ++M +L H+ ++ PWNCPHGRPTM
Sbjct: 187 ---TGQMVRCSKARAMFAMRACRKSVMIGMPLNSHQMLTVLRHMGTIDQPWNCPHGRPTM 243
Query: 805 RHLVDLTTI 813
RHL+D+TTI
Sbjct: 244 RHLLDITTI 252
>gi|307184301|gb|EFN70759.1| Mismatch repair endonuclease PMS2 [Camponotus floridanus]
Length = 672
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 95/215 (44%), Positives = 132/215 (61%), Gaps = 8/215 (3%)
Query: 601 ATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLN 660
A EL+R K+ FG+M+VIGQFNLGFII +L+ DLFI+DQHA DEK+ FE+LS T L
Sbjct: 466 AEKELQRELTKDSFGKMEVIGQFNLGFIITRLENDLFIIDQHATDEKFRFEKLSNETKLK 525
Query: 661 QQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFG 720
Q L+ P ++ + E + H + NGF+ + A G + L +P S FG
Sbjct: 526 TQKLIVPKPMNFSALSETILIEHQKMFEDNGFTFNINEQAELGKKIELIGMPVSGHWQFG 585
Query: 721 VEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNE 780
ED+++L+ + + E ++ PSRVR MLASRACRS++MIG AL NE
Sbjct: 586 QEDIEELVFLIREAGNEIKEKHIFR--------PSRVRQMLASRACRSAVMIGTALNTNE 637
Query: 781 MQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRK 815
M K++ +A + +PWNCPHGRPT+RH++ L I K
Sbjct: 638 MHKLIMQMAQMQNPWNCPHGRPTIRHILSLLLINK 672
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 98/198 (49%), Gaps = 23/198 (11%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFG---------- 129
RA+ + +Y L++ ++ C+N +++ T+ + S+ DNI +VFG
Sbjct: 182 RAIQVLYSYCLVSTNIKIACSNLIASKSPHLIVTTRNTDSVLDNINSVFGKKSLDGIIKL 241
Query: 130 ---------MNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLP 180
+ YN V I C ++S GR+ DRQ+F+VN RP DL
Sbjct: 242 ELQSPDETTLQEYNLSNDVTIDFDWEC----YVSTCDHAIGRSSPDRQFFYVNGRPCDLT 297
Query: 181 KVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQ 240
KVSKLVN +Y N++QYP +N + + DVNVTPDKR +FF+ E IL L+ L
Sbjct: 298 KVSKLVNNVYHKYNNKQYPFVFLNVKLNRQCADVNVTPDKRTIFFTQERLILATLKFSLT 357
Query: 241 EIYSPNNASYSVNKVEQL 258
+ +++ + +L
Sbjct: 358 AKWDKLQGNFTAKPLTEL 375
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/76 (50%), Positives = 50/76 (65%)
Query: 3 VETPTNSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEW 62
V T S I INK +H IC+GQV+ DL+ AVKELVENSLD+ AT I++ L +YG+
Sbjct: 5 VATTEKSKKIEAINKETIHHICSGQVVFDLAIAVKELVENSLDSNATVIDVKLIDYGKTC 64
Query: 63 FQVVDNGCGISPNNFK 78
V DNG G+ +F+
Sbjct: 65 ISVSDNGSGVLEQDFE 80
>gi|332031616|gb|EGI71088.1| Mismatch repair endonuclease PMS2 [Acromyrmex echinatior]
Length = 672
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 103/274 (37%), Positives = 158/274 (57%), Gaps = 24/274 (8%)
Query: 542 STLQFSIQDLRKRRQQRLSIMQSSCHTSGSVKMRRCFAAATLELSQPENEERKARALAAA 601
+ + SI ++++ ++++I ++ T+ +K R +E +Q E E+
Sbjct: 423 TEMMISIVTIKEKLNEKVNIARTPVSTAKRIKYR-----VQMEANQSEAEK--------- 468
Query: 602 TTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQ 661
EL++ K+ FG+M++IGQFNLGFII +L+ DLFI+DQHA DEK+ FE+LS T L
Sbjct: 469 --ELQKELTKDSFGKMEIIGQFNLGFIIARLEDDLFIIDQHATDEKFRFEKLSNETKLKT 526
Query: 662 QPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGV 721
Q L+ P L+ + E + H + NGF+ + A G + L +P S F
Sbjct: 527 QKLIVPKLLNFSALNETILIEHQQMFEDNGFTFNINEQAEPGKKIELIGMPVSGHWQFDQ 586
Query: 722 EDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEM 781
ED+++LI + + E Y+ PSRVR MLASRACRS++MIG AL +EM
Sbjct: 587 EDIEELIFLIREAGNENMDKHIYR--------PSRVRQMLASRACRSAVMIGTALNFSEM 638
Query: 782 QKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRK 815
Q+++ +A + +PW+CPHGRPT+RHL+ L I K
Sbjct: 639 QRLITQMAQMQNPWSCPHGRPTIRHLLSLLLINK 672
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 97/194 (50%), Gaps = 15/194 (7%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
RA+ + +Y L++ V+ C+N ++++ T+ + + +N+ +VFG + + +
Sbjct: 182 RAIQVLYSYCLVSTSVKITCSNLISGKSPNLIVATRNTDDVLNNVNSVFGKKSLDGIVKL 241
Query: 140 AICKSDSCKV---------------EGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSK 184
+ D + E ++S GR+ DRQ+F+VN RP DL KV K
Sbjct: 242 ELQTPDETVLQEYNLPNDIIVDFDWECYVSTCNHTIGRSSPDRQFFYVNGRPCDLAKVGK 301
Query: 185 LVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYS 244
L+N +Y N++QYP N + + DVNVTPDKR +F + E IL L+ L +
Sbjct: 302 LINNVYHKYNNKQYPFVFFNLKLDRQCADVNVTPDKRTIFVTQERLILATLKFSLTIKWD 361
Query: 245 PNNASYSVNKVEQL 258
+++V + +L
Sbjct: 362 KLQGNFTVKTLTEL 375
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 51/76 (67%)
Query: 3 VETPTNSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEW 62
V T S I IN+ +H IC+GQV+ DL+ A+KELVENSLD+GAT I++ L +YG+
Sbjct: 5 VATIEKSKKIEAINRETIHHICSGQVVLDLAIAIKELVENSLDSGATVIDVKLTDYGKTC 64
Query: 63 FQVVDNGCGISPNNFK 78
V DNG G+ +F+
Sbjct: 65 ISVNDNGSGVLEQDFE 80
>gi|366995507|ref|XP_003677517.1| hypothetical protein NCAS_0G02780 [Naumovozyma castellii CBS 4309]
gi|342303386|emb|CCC71165.1| hypothetical protein NCAS_0G02780 [Naumovozyma castellii CBS 4309]
Length = 855
Score = 197 bits (501), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 126/355 (35%), Positives = 187/355 (52%), Gaps = 45/355 (12%)
Query: 479 NEKPREELVTQEKATPLLNVPSIVSSSNDLKKNSEDLSVAASHLQFSGSILDAPVPSSSL 538
NE+ +ELV +E L V V++ +D+ N E++ LD P L
Sbjct: 511 NERSEQELVREEGNLVGL-VADEVANKDDVSTNDEEID---------DVFLDEPTVKQEL 560
Query: 539 DICSTLQFS-------IQDLRKRRQQRLSIMQSSCH-------TSGSVKMRRCFAAATLE 584
++CS+ + + D + RL ++ + S + +R +
Sbjct: 561 NVCSSSMGNSSDKIRLLSDYKPSNNTRLYSLKRNLRLPSLKRLISTGIDIRGKLDSENSL 620
Query: 585 LSQ---PENEERKARALAAATTELERLFRKEDFGRMKVIGQFNLGFII--GKLDQ--DLF 637
L++ E++ + L + L +K DF +M +IGQFNLGFI+ KLD DLF
Sbjct: 621 LAEDGISSFEDKNSELLEDSLQHLTLTVKKPDFKKMVIIGQFNLGFIVVTRKLDNKYDLF 680
Query: 638 IVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEED 697
IVDQHA+DEKYNFE L + TV N Q L+ P +DL+ +E+V + + KNGF L D
Sbjct: 681 IVDQHASDEKYNFEMLQKETVFNSQRLIAPQPMDLSIIDELVVIDNKQVFEKNGFKLSID 740
Query: 698 PHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTAD--SVCPS 755
A G + +L ++P SKK FG++D +LI + +N +T+D ++ S
Sbjct: 741 EDAAQGRKIKLLSLPVSKKTVFGLDDFDELIHLVKEN------------NTSDNGTIRCS 788
Query: 756 RVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
++R+M A RACRSSIMIG L M +++ HL DL+ PWNCPHGRPTMRHL +L
Sbjct: 789 KIRSMFAMRACRSSIMIGKPLTTKIMTRVVHHLGDLDKPWNCPHGRPTMRHLAEL 843
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 95/192 (49%), Gaps = 22/192 (11%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
+ + L Q+YA+I + ++F N + K KS VL T G S+ II++FG N + L +
Sbjct: 172 KCINLLQSYAIIQENIKFTVWNISSKGRKSSVLTTTGHQSIPKKIISIFGSNAMHGLSHI 231
Query: 140 AICKS----------------------DSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPV 177
I ++ G++SK G GR+ DRQ+F++N RP+
Sbjct: 232 DIVVDLNPFKDRIMKRYLDDPTFENIDYKIRLVGYISKISFGCGRSSKDRQFFYINKRPI 291
Query: 178 DLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALRE 237
+++K N++Y+ N+ Q P +N V DVNVTPDKR V +E ++ ++
Sbjct: 292 QYQQLAKCCNDVYRLFNNVQNPAIFLNLEVSPSLVDVNVTPDKRTVLLHNEKLVMDLIKT 351
Query: 238 GLQEIYSPNNAS 249
L E ++ + S
Sbjct: 352 SLTEYFNAEDFS 363
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 52/72 (72%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
TI IN+ +HR+ +GQVI DL SAVKELV+NS+DA ++ IE+ ++ G E+F+ D+G
Sbjct: 3 TISAINEKDIHRLTSGQVIVDLVSAVKELVDNSIDAHSSQIELTFRDNGLEYFECSDDGD 62
Query: 71 GISPNNFKVRAV 82
GI+P N+ A+
Sbjct: 63 GIAPENYSSLAL 74
>gi|307192776|gb|EFN75866.1| Mismatch repair endonuclease PMS2 [Harpegnathos saltator]
Length = 672
Score = 196 bits (499), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 106/301 (35%), Positives = 169/301 (56%), Gaps = 27/301 (8%)
Query: 516 SVAASHLQFSGSIL-DAPVPSSSLDICSTLQFSIQDLRKRRQQRLSIMQSSCHTSGSVKM 574
S + SH+ + I D + S+++ + +I ++++ + + +++++S +T +K
Sbjct: 398 SSSISHMSRNNDIWNDIKLRKKSVNV--EMMINITMIKQKLKAKQNVVKASINTGRRIKY 455
Query: 575 RRCFAAATLELSQPENEERKARALAAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQ 634
R +E +Q + E+ EL+R K+ F +M+++GQFNLGFII +L+
Sbjct: 456 R-----VQMEGNQGDAEK-----------ELQRELTKDSFSKMEIVGQFNLGFIIARLED 499
Query: 635 DLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSL 694
DLFI+DQHA DEK+ FE+ S T L Q L+ P L+ + E + H NGF+
Sbjct: 500 DLFIIDQHATDEKFRFEKFSNETKLKTQKLIIPKPLNFSALNETILIDHQQTFEDNGFTF 559
Query: 695 EEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCP 754
+ D A G R L +P S FG ED+++L+ + + E ++ P
Sbjct: 560 KIDKQAEPGKRIELIGMPVSGGWQFGQEDIEELVFLIREGGSENKEKHIFR--------P 611
Query: 755 SRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIR 814
SRVR MLASRACRS++MIG AL NEMQ+++ + + +PWNCPHGRPT+RHL+ L +
Sbjct: 612 SRVRQMLASRACRSAVMIGTALNTNEMQRLIMQMTQMQNPWNCPHGRPTIRHLLSLLLVN 671
Query: 815 K 815
K
Sbjct: 672 K 672
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 98/194 (50%), Gaps = 15/194 (7%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
R + + Y L++ V+ C NT ++++ T+ S+ + DNI +VFG + + +
Sbjct: 182 RTIQVLYGYCLVSTNVKITCFNTISSKSPNLIVATRSSNYVLDNINSVFGKKALDGIVKL 241
Query: 140 AICKSDSCKV---------------EGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSK 184
+ D + E ++S GR+ DRQ+F+VN RP DL K+SK
Sbjct: 242 ELQAPDEMTLQEYNLSDNVPMDFDWECYVSVCDHAIGRSSPDRQFFYVNGRPCDLMKISK 301
Query: 185 LVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYS 244
LVN +Y N++QYP +N + ++ DVNVTPDKR +FF+ E IL L+ L +
Sbjct: 302 LVNNVYHKYNNKQYPFVFLNIKLDRQSADVNVTPDKRTIFFTQERFILATLKYSLIAKWD 361
Query: 245 PNNASYSVNKVEQL 258
+++ + L
Sbjct: 362 KMQGNFTAKTLTDL 375
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 51/76 (67%)
Query: 3 VETPTNSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEW 62
V T S I INK +H IC+GQV+ DL+ AVKELVENSLD+GAT I+I L +YG+
Sbjct: 5 VATSEKSKKIEAINKETIHHICSGQVVLDLAIAVKELVENSLDSGATVIDIKLIDYGKTC 64
Query: 63 FQVVDNGCGISPNNFK 78
+ DNG G+ +F+
Sbjct: 65 ISINDNGSGVLEQDFE 80
>gi|401881819|gb|EJT46101.1| hypothetical protein A1Q1_05312 [Trichosporon asahii var. asahii
CBS 2479]
Length = 986
Score = 196 bits (499), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 110/289 (38%), Positives = 164/289 (56%), Gaps = 36/289 (12%)
Query: 542 STLQFSIQDLRKRRQQRLSIM-QSSCHTSGSVKMRRCFAAATLELSQPENEERKARALAA 600
+TL+F ++ +R RR LS+ Q + +K + +AA ++ R LA+
Sbjct: 718 ATLRFDMEQVR-RRWASLSLSPQPKTDVATKLKKGQATSAAGVQ----------NRDLAS 766
Query: 601 ATTELERLFRKEDFGRMKVIGQFNLGFIIGKL------DQDLFIVDQHAADEKYNFERLS 654
A L R K DF RM+++GQFN GFII L ++DL+I+DQHA+DEKYNFE L
Sbjct: 767 AEAALSRSIDKADFARMRILGQFNRGFIIAALPSSTEGEEDLYIIDQHASDEKYNFETLQ 826
Query: 655 QSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFS 714
++ + Q LL P L L+ +E+ H D++ +NGF L+ DP + G R +L AVP S
Sbjct: 827 RTHRIQAQALLAPKVLQLSAGDEITLLEHQDVVERNGFELKYDPDGVPGRRVKLCAVPVS 886
Query: 715 KKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGD 774
+ F D+ +LI + D D+ S+ RAM A RACR S+MIG
Sbjct: 887 RDTVFDESDLAELIHHINDGH--------------DNPRTSKARAMFAMRACRRSVMIGT 932
Query: 775 ALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKNIDENGAG 823
AL + +M++++ ++ ++ PWNCPHGRPTMRH LTT+ + D++G G
Sbjct: 933 ALAKPKMEQLVRNMGTIDQPWNCPHGRPTMRH---LTTVEPS-DQSGRG 977
Score = 119 bits (299), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 103/197 (52%), Gaps = 18/197 (9%)
Query: 79 VRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP 138
+A+ + AYAL+ V T + ++ VL T G ++ ++ ++G + L
Sbjct: 170 AKALGILTAYALVPASVGDGRKGLTDRK-RNTVLTTDGRGGVRASVSALWGAKALSGLVD 228
Query: 139 VAI-----------------CKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPK 181
+ + S +V G +S QG GR DRQY ++N RP +LP+
Sbjct: 229 LDLNFDVEVDRAMARREGLDVSSQPVRVTGLISSAAQGQGRASSDRQYTYINGRPCNLPQ 288
Query: 182 VSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQE 241
V K VNE+YK N Q P+A+++F +P + D+NV+PDKR VF E +++ ALRE L +
Sbjct: 289 VMKAVNEVYKTYNISQVPLAVLDFRLPPESVDINVSPDKRTVFVHSERNLIAALREALDQ 348
Query: 242 IYSPNNASYSVNKVEQL 258
Y+P ++++V Q+
Sbjct: 349 FYAPTRSNFAVGGASQI 365
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 48/67 (71%), Gaps = 3/67 (4%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
TI+ I++ VHR+ +GQV+ DL SAVKELVEN++DAGATS+ ++ G + +V DNG
Sbjct: 3 TIKAIDQTSVHRLHSGQVVLDLQSAVKELVENAIDAGATSVG---EDNGLDSVEVTDNGS 59
Query: 71 GISPNNF 77
GI ++
Sbjct: 60 GIKEEDW 66
>gi|406701099|gb|EKD04253.1| postmeiotic segregation increased 2 [Trichosporon asahii var.
asahii CBS 8904]
Length = 950
Score = 196 bits (498), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 110/289 (38%), Positives = 164/289 (56%), Gaps = 36/289 (12%)
Query: 542 STLQFSIQDLRKRRQQRLSIM-QSSCHTSGSVKMRRCFAAATLELSQPENEERKARALAA 600
+TL+F ++ +R RR LS+ Q + +K + +AA ++ R LA+
Sbjct: 682 ATLRFDMEQVR-RRWASLSLSPQPKTDVATKLKKGQATSAAGVQ----------NRDLAS 730
Query: 601 ATTELERLFRKEDFGRMKVIGQFNLGFIIGKL------DQDLFIVDQHAADEKYNFERLS 654
A L R K DF RM+++GQFN GFII L ++DL+I+DQHA+DEKYNFE L
Sbjct: 731 AEAALSRSIDKADFARMRILGQFNRGFIIAALPSSTEGEEDLYIIDQHASDEKYNFETLQ 790
Query: 655 QSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFS 714
++ + Q LL P L L+ +E+ H D++ +NGF L+ DP + G R +L AVP S
Sbjct: 791 RTHRIQAQALLAPKVLQLSAGDEITLLEHQDVVERNGFELKYDPDGVPGRRVKLCAVPVS 850
Query: 715 KKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGD 774
+ F D+ +LI + D D+ S+ RAM A RACR S+MIG
Sbjct: 851 RDTVFDESDLAELIHRINDGH--------------DNPRTSKARAMFAMRACRRSVMIGT 896
Query: 775 ALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKNIDENGAG 823
AL + +M++++ ++ ++ PWNCPHGRPTMRH LTT+ + D++G G
Sbjct: 897 ALAKPKMEQLVRNMGTIDQPWNCPHGRPTMRH---LTTVEPS-DQSGRG 941
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 99/185 (53%), Gaps = 6/185 (3%)
Query: 79 VRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP 138
+A+ + AYAL+ V T + ++ VL T G ++ ++ ++G L
Sbjct: 144 AKALGILTAYALVPASVGDGRKGLTDRK-RNTVLTTDGRGGVRASVSALWGAKALTGLVD 202
Query: 139 VAI-----CKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGA 193
+ + + EG QG GR DRQY ++N RP +LP+V K VNE+YK
Sbjct: 203 LDLNFDVEVDRAMARREGLDVSAAQGQGRASSDRQYTYINGRPCNLPQVMKAVNEVYKAY 262
Query: 194 NSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASYSVN 253
N Q P+A+++F +P + D+NV+PDKR VF E +++ ALRE L + Y+P ++++V
Sbjct: 263 NISQVPLAVLDFRLPPESVDINVSPDKRTVFVHSERNLIAALREALDQFYAPTRSNFAVG 322
Query: 254 KVEQL 258
Q+
Sbjct: 323 GASQI 327
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 48/67 (71%), Gaps = 3/67 (4%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
TI+ I++ VHR+ +GQV+ DL SAVKELVEN++DAGATS+ ++ G + +V DNG
Sbjct: 3 TIKAIDQTSVHRLHSGQVVLDLQSAVKELVENAIDAGATSVG---EDNGLDSVEVTDNGS 59
Query: 71 GISPNNF 77
GI ++
Sbjct: 60 GIKEEDW 66
>gi|402223104|gb|EJU03169.1| DNA mismatch repair protein MutL [Dacryopinax sp. DJM-731 SS1]
Length = 1010
Score = 196 bits (498), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 104/240 (43%), Positives = 143/240 (59%), Gaps = 32/240 (13%)
Query: 601 ATTELERLFRKEDFGRMKVIGQFNLGFII---------GKLDQD-LFIVDQHAADEKYNF 650
A L R+ K DFGRM ++GQFNLGF+I GK + D LFIVDQHAADEK+NF
Sbjct: 774 AEATLSRVITKADFGRMVILGQFNLGFVIVRLRKESEDGKKEYDELFIVDQHAADEKFNF 833
Query: 651 ERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEE------DPHALAGL 704
E L Q+T + Q L RP L+LTP +E+VA ++ I+R+NGF +EE D ++A
Sbjct: 834 ESLQQTTRIQSQALFRPRPLELTPADELVALENLAILRENGFDVEEVEMAAADDESIAAR 893
Query: 705 --RFRLKAVPFSKKITFGVEDVKDLISTLADN-QGECSIISSYKMDTADSVCPSRVRAML 761
R RL A P SK F ++D+++L+ + D +G+ V S+ R M
Sbjct: 894 QSRLRLTAQPISKNTVFDMKDLEELLHLMQDAPKGQM-------------VRCSKARTMF 940
Query: 762 ASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKNIDENG 821
A+RACR S+MIG AL R +M ++ H+ + PWNCPHGRPTMRHL+ L K +++
Sbjct: 941 ATRACRRSVMIGMALTRQQMTNVVRHMGTMEQPWNCPHGRPTMRHLLSLPDFIKRMNKKA 1000
Score = 112 bits (281), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 103/195 (52%), Gaps = 21/195 (10%)
Query: 80 RAVFLCQAYALIA----KGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNC 135
+AV L AYA++ GVR +N K+V L+T G+ +L++NI ++G +
Sbjct: 176 KAVALLTAYAMVPCSKPPGVRLTVSNQPEGGKKTVQLRTDGTPNLRNNIANLWGRKVLEH 235
Query: 136 LEPVAIC-----------------KSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVD 178
L V + S + + G +S P S R DRQY F+N RP +
Sbjct: 236 LADVDLTLEVDADKSMLKRTGHTPSSATIQCRGVMSLPTFASSRTAADRQYLFLNSRPCN 295
Query: 179 LPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREG 238
LPKV+K + +++ + + +++ +PT A DVNV+PDKR + +E +++ +L+
Sbjct: 296 LPKVTKAIADVWHSFCVQGQGMWVLDITLPTDAYDVNVSPDKRSILLHNEENMITSLKAA 355
Query: 239 LQEIYSPNNASYSVN 253
L+E++ P ++++VN
Sbjct: 356 LEELWQPTRSTFAVN 370
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 50/66 (75%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ I + VH+I +GQV+ DL +AVKELVENSLDAGATSIE+ K+YG + +V+DNG G
Sbjct: 5 IKAIPQHSVHKITSGQVVVDLQTAVKELVENSLDAGATSIEVRFKDYGLKAIEVLDNGSG 64
Query: 72 ISPNNF 77
I ++
Sbjct: 65 IKSADY 70
>gi|392579672|gb|EIW72799.1| hypothetical protein TREMEDRAFT_25119, partial [Tremella
mesenterica DSM 1558]
Length = 897
Score = 196 bits (498), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 99/218 (45%), Positives = 139/218 (63%), Gaps = 19/218 (8%)
Query: 599 AAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQ----DLFIVDQHAADEKYNFERLS 654
++A L R+ K DF M+V+GQFN GFII +L + DLFI+DQHA+DEKYNFE L
Sbjct: 672 SSAEAALSRVISKVDFEDMEVLGQFNKGFIIARLRRNESDDLFIIDQHASDEKYNFETLQ 731
Query: 655 QSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLE--EDPHALAGLRFRLKAVP 712
++T++ Q L++P L LT +E+ A H+D++R NGF ++ ED G R L A+P
Sbjct: 732 RTTIIKAQKLIKPRSLQLTAGDEITAMEHLDVLRNNGFEVKIVEDAPPGRGERVLLSAMP 791
Query: 713 FSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMI 772
SK+ TF V+D++ L+ L++ G S C S+ RAM A RACR S+MI
Sbjct: 792 VSKETTFDVKDLEQLLHLLSEGGG------------PKSRC-SKARAMFAMRACRKSVMI 838
Query: 773 GDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
G AL + +M +L ++ ++ PWNCPHGRPTMRHLV+L
Sbjct: 839 GKALTKAQMTTLLRNMGTIDQPWNCPHGRPTMRHLVNL 876
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 101/182 (55%), Gaps = 25/182 (13%)
Query: 80 RAVFLCQAYALI------AKGVRF-VCTNTTGKNVK-SVVLKTQGSSSLKDNIITVFG-- 129
+A+ L AYAL+ KG+R V + +GK+ K S +L T G SL+ ++I ++G
Sbjct: 170 KALSLLTAYALVPSVGRDGKGIRIKVESLPSGKSGKRSTLLSTDGRGSLRSSVINIWGPK 229
Query: 130 -----MNIY----------NCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVND 174
++I+ N A S KV+G +S G GR+ DRQYF+VN
Sbjct: 230 ALEGVLDIHLEVEVSNDRPNLKRQGAQEMSHIVKVDGLISTAAWGQGRSSPDRQYFYVNG 289
Query: 175 RPVDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHA 234
RP DL KV + +NE+YK N+ Q P+AI++F +P D+NV+PDKR VF E ++ A
Sbjct: 290 RPCDLSKVGRAINEVYKSFNTHQVPLAILDFTLPPMTVDINVSPDKRTVFLHSEMQLVEA 349
Query: 235 LR 236
LR
Sbjct: 350 LR 351
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 47/68 (69%)
Query: 15 INKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISP 74
I+ VH + +GQVI DL +KEL+EN+LD+GA +E+ ++++G E +V DNG GI
Sbjct: 2 IDSASVHHLHSGQVILDLQGCLKELLENALDSGANQVEVRIRDHGLEGIEVSDNGSGIKE 61
Query: 75 NNFKVRAV 82
++++ A+
Sbjct: 62 DDWEFIAL 69
>gi|444324156|ref|XP_004182718.1| hypothetical protein TBLA_0J02050 [Tetrapisispora blattae CBS 6284]
gi|387515766|emb|CCH63199.1| hypothetical protein TBLA_0J02050 [Tetrapisispora blattae CBS 6284]
Length = 890
Score = 196 bits (498), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 94/205 (45%), Positives = 135/205 (65%), Gaps = 14/205 (6%)
Query: 610 RKEDFGRMKVIGQFNLGFIIGKLD----QDLFIVDQHAADEKYNFERLSQSTVLNQQPLL 665
+K+DF M+++GQFNLGFII DLFIVDQHA+DEKYNFE+L ++TV Q L+
Sbjct: 684 KKDDFKTMEIVGQFNLGFIIVTRQIEDKYDLFIVDQHASDEKYNFEKLQENTVFKSQRLI 743
Query: 666 RPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVK 725
P+ L+L+ +E++ +++I KNGF +E D G + RL ++P SKK F +ED+
Sbjct: 744 APMMLELSVIDEMIVMDNIEIFIKNGFKIEIDEDGEIGNKIRLISLPVSKKTLFDIEDLY 803
Query: 726 DLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKIL 785
+LI + ++ G D++ S++R+M A RACRSSIMIG L N M +++
Sbjct: 804 ELIYLIKESDGL----------NKDNIRCSKIRSMFAMRACRSSIMIGKPLTMNSMVRVV 853
Query: 786 EHLADLNSPWNCPHGRPTMRHLVDL 810
HL +L+ PWNCPHGRPTMRHL++L
Sbjct: 854 RHLGELDKPWNCPHGRPTMRHLMEL 878
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 102/205 (49%), Gaps = 33/205 (16%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAIC- 142
L Q+YA+I K ++F + TG K++V+ T S ++ I+++FG N + L + I
Sbjct: 175 LLQSYAIIQKTIKFSVWHITGNGKKNLVISTTKSQAMNKRILSIFGSNGMHGLSDIDINL 234
Query: 143 ---------------------KSDSC-KVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLP 180
K D C +V G +SK G GRN DRQ+ ++N RP++ P
Sbjct: 235 DLNPFKNRMVRKFQENAVNFEKLDYCIRVHGLISKNSFGCGRNSKDRQFLYINSRPIEYP 294
Query: 181 KVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQ 240
+ K NE+Y+ N+ Q+P +NF + DVNVTPDKR V E I+ LRE L
Sbjct: 295 ILLKNCNEIYRMFNNVQFPALFLNFELMPSLIDVNVTPDKRTVLLHYEQIIVDVLREELM 354
Query: 241 EIYSPNNASYSVNKVEQLIEPEKSG 265
+ + ++L+ P++ G
Sbjct: 355 KYFDK----------QELVLPKRVG 369
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 51/71 (71%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I +N +HRI +GQVI DL++AVKEL++NS+DA A+ IEI K YG E + D+G G
Sbjct: 4 ISALNIDDIHRITSGQVIIDLTTAVKELLDNSIDADASQIEITFKNYGIESIECSDDGSG 63
Query: 72 ISPNNFKVRAV 82
ISPNN++ A+
Sbjct: 64 ISPNNYENLAL 74
>gi|389634121|ref|XP_003714713.1| hypothetical protein MGG_15760 [Magnaporthe oryzae 70-15]
gi|351647046|gb|EHA54906.1| hypothetical protein MGG_15760 [Magnaporthe oryzae 70-15]
Length = 1107
Score = 196 bits (498), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 105/236 (44%), Positives = 139/236 (58%), Gaps = 34/236 (14%)
Query: 601 ATTELERLFRKEDFGRMKVIGQFNLGFII---------------------GKLDQDLFIV 639
A +L K DF +MK+IGQFNLGFII G D +LFI+
Sbjct: 853 AEQKLSLTITKSDFAQMKIIGQFNLGFIIAVREATTKGARDVVPSNRTGGGFTDDELFII 912
Query: 640 DQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGF--SLEED 697
DQHA+DEKYNFERL STV+ Q L+RP L+LT EE + + + NGF ++E
Sbjct: 913 DQHASDEKYNFERLQASTVVESQRLVRPKPLELTALEEEIIIENQKALETNGFIVDVDES 972
Query: 698 PHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVC-PSR 756
+ G R RL ++P S++ TF + D+++L+S LADN TA +V PSR
Sbjct: 973 GESPVGSRCRLLSLPLSRETTFSLTDLEELVSLLADN----------PTTTATTVPRPSR 1022
Query: 757 VRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTT 812
VR M A RACRSS+M+G AL + +M+K++ H+ + PWNCPHGRPTMRHL L T
Sbjct: 1023 VRKMFAMRACRSSVMVGRALSQPQMEKVVRHMGGMEKPWNCPHGRPTMRHLCGLGT 1078
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 106/209 (50%), Gaps = 25/209 (11%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFG---------M 130
+ + L YA I G++F + K ++V+ T+G+ S ++NI+ VFG M
Sbjct: 177 KVINLLNQYACIQTGIKFTVSQQPTKGKRTVLFSTKGNKSTRENIVNVFGAKTLSALIAM 236
Query: 131 NIYNCLEP----VAICKSDSCK---------VEGFLSKPGQGSGRNLGDRQYFFVNDRPV 177
+ LEP V + S + V G +S+P +G GR DRQ F+VN RP
Sbjct: 237 ELELELEPTTSKVTAAATGSTRHQGETTTVFVRGHVSRPARGEGRQTPDRQMFYVNGRPC 296
Query: 178 DLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALRE 237
LP+ +K+ NE+YK NS Q P + + T DVNV+PDKR + D+ +L +RE
Sbjct: 297 ILPQFAKVFNEVYKTYNSTQSPFIFADIQLDTHLYDVNVSPDKRSILLHDQGRMLDNMRE 356
Query: 238 GLQEIYSPNNASYSVNKVEQLIEPEKSGP 266
L E++ + + V+ QLI + + P
Sbjct: 357 ALIELFEKQDITIPVS---QLITQKPTTP 382
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 50/67 (74%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
TI+ I GVVH+I +GQVI DL S KEL+ENSLDAGAT+I++ K G + +V DNGC
Sbjct: 7 TIKAIEAGVVHQIQSGQVIVDLCSVAKELIENSLDAGATAIDVRFKNQGLDSIEVQDNGC 66
Query: 71 GISPNNF 77
GI+P N+
Sbjct: 67 GIAPQNY 73
>gi|449662703|ref|XP_002165510.2| PREDICTED: mismatch repair endonuclease PMS2-like [Hydra
magnipapillata]
Length = 802
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 95/216 (43%), Positives = 136/216 (62%), Gaps = 15/216 (6%)
Query: 599 AAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTV 658
+AA EL + K+ F +M+++GQFNLGFII K +++LFI+DQHA DEKYNFE L + V
Sbjct: 598 SAAEEELTKHVSKDMFAKMEIVGQFNLGFIITKYEENLFIIDQHATDEKYNFETLQKKHV 657
Query: 659 LNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKIT 718
L Q L+ P+ ++LT E + +++I +KNGF + D + +L VP S +
Sbjct: 658 LKGQRLIEPISMELTLVNESILIDNINIFKKNGFEFKIDYEQTGNSKIKLLTVPTSLNSS 717
Query: 719 FGVEDVKDLISTLADNQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALG 777
F V DV++LI L D+ G +C PSRVR M AS+ACRSS+M+G AL
Sbjct: 718 FSVSDVEELIFMLNDSPG--------------VMCRPSRVRQMFASKACRSSVMVGTALD 763
Query: 778 RNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTI 813
M+++++H+ ++ PWNCPHGRPTMRHL+ L I
Sbjct: 764 HFMMKRLVQHMGEIEHPWNCPHGRPTMRHLICLQRI 799
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 92/187 (49%), Gaps = 21/187 (11%)
Query: 87 AYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFG----------------- 129
AY+LI GVRF C N G N K V+L T G+ ++ I +FG
Sbjct: 186 AYSLINNGVRFSCINQVG-NKKKVLLSTDGNKNVPSIISGIFGETQTKQLLKIEQISKFD 244
Query: 130 ---MNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLV 186
+ YN I + GF+S GSGRNL DRQ+ F+N+RP D K+ +++
Sbjct: 245 NSVLEEYNLPTSFVIQFDGHFTLNGFISATDHGSGRNLPDRQFIFINNRPCDFTKLLRVI 304
Query: 187 NELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPN 246
NE+Y N QYP +N + DVN+TP+KR++ +E +L ++ L+ ++ +
Sbjct: 305 NEVYHTYNRHQYPFIYLNVLARKDCVDVNITPNKRQIMVQEEKVLLAFVKSTLKCMFENS 364
Query: 247 NASYSVN 253
Y N
Sbjct: 365 VNHYKDN 371
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 43/72 (59%), Positives = 57/72 (79%)
Query: 7 TNSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVV 66
+NSP I+PI++ +H IC+GQV+ DL++AVKELVENSLDA IEI LKEYG+E+ +V
Sbjct: 6 SNSPAIQPIDQSSIHHICSGQVVLDLATAVKELVENSLDANGKIIEIRLKEYGKEYIEVS 65
Query: 67 DNGCGISPNNFK 78
DNG GI N+F+
Sbjct: 66 DNGDGIEENDFE 77
>gi|440471464|gb|ELQ40472.1| DNA mismatch repair protein pms1 [Magnaporthe oryzae Y34]
gi|440484713|gb|ELQ64744.1| DNA mismatch repair protein pms1 [Magnaporthe oryzae P131]
Length = 1111
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 105/236 (44%), Positives = 139/236 (58%), Gaps = 34/236 (14%)
Query: 601 ATTELERLFRKEDFGRMKVIGQFNLGFII---------------------GKLDQDLFIV 639
A +L K DF +MK+IGQFNLGFII G D +LFI+
Sbjct: 852 AEQKLSLTITKSDFAQMKIIGQFNLGFIIAVREATTKGARDVVPSNRTGGGFTDDELFII 911
Query: 640 DQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGF--SLEED 697
DQHA+DEKYNFERL STV+ Q L+RP L+LT EE + + + NGF ++E
Sbjct: 912 DQHASDEKYNFERLQASTVVESQRLVRPKPLELTALEEEIIIENQKALETNGFIVDVDES 971
Query: 698 PHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVC-PSR 756
+ G R RL ++P S++ TF + D+++L+S LADN TA +V PSR
Sbjct: 972 GESPVGSRCRLLSLPLSRETTFSLTDLEELVSLLADN----------PTTTATTVPRPSR 1021
Query: 757 VRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTT 812
VR M A RACRSS+M+G AL + +M+K++ H+ + PWNCPHGRPTMRHL L T
Sbjct: 1022 VRKMFAMRACRSSVMVGRALSQPQMEKVVRHMGGMEKPWNCPHGRPTMRHLCGLGT 1077
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 106/209 (50%), Gaps = 25/209 (11%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFG---------M 130
+ + L YA I G++F + K ++V+ T+G+ S ++NI+ VFG M
Sbjct: 176 KVINLLNQYACIQTGIKFTVSQQPTKGKRTVLFSTKGNKSTRENIVNVFGAKTLSALIAM 235
Query: 131 NIYNCLEP----VAICKSDSCK---------VEGFLSKPGQGSGRNLGDRQYFFVNDRPV 177
+ LEP V + S + V G +S+P +G GR DRQ F+VN RP
Sbjct: 236 ELELELEPTTSKVTAAATGSTRHQGETTTVFVRGHVSRPARGEGRQTPDRQMFYVNGRPC 295
Query: 178 DLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALRE 237
LP+ +K+ NE+YK NS Q P + + T DVNV+PDKR + D+ +L +RE
Sbjct: 296 ILPQFAKVFNEVYKTYNSTQSPFIFADIQLDTHLYDVNVSPDKRSILLHDQGRMLDNMRE 355
Query: 238 GLQEIYSPNNASYSVNKVEQLIEPEKSGP 266
L E++ + + V+ QLI + + P
Sbjct: 356 ALIELFEKQDITIPVS---QLITQKPTTP 381
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 50/67 (74%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
TI+ I GVVH+I +GQVI DL S KEL+ENSLDAGAT+I++ K G + +V DNGC
Sbjct: 6 TIKAIEAGVVHQIQSGQVIVDLCSVAKELIENSLDAGATAIDVRFKNQGLDSIEVQDNGC 65
Query: 71 GISPNNF 77
GI+P N+
Sbjct: 66 GIAPQNY 72
>gi|71006946|ref|XP_758079.1| hypothetical protein UM01932.1 [Ustilago maydis 521]
gi|46097153|gb|EAK82386.1| hypothetical protein UM01932.1 [Ustilago maydis 521]
Length = 971
Score = 196 bits (497), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 102/220 (46%), Positives = 135/220 (61%), Gaps = 20/220 (9%)
Query: 605 LERLFRKEDFGRMKVIGQFNLGFIIGK-----------LDQDLFIVDQHAADEKYNFERL 653
L R+ K+DF M+VIGQFNLGFII + +D DLFIVDQHA+DEK+NFE L
Sbjct: 736 LSRVIHKDDFAAMEVIGQFNLGFIIARRRTRPDSSSHDMD-DLFIVDQHASDEKFNFETL 794
Query: 654 SQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPF 713
+T + Q L+ P L+L+ +E+VA H + + NGF + L G R +L A P
Sbjct: 795 QLTTQIRSQKLIVPRPLELSASDELVAIEHQETLLSNGFDISVSETGLPGTRAKLVAQPI 854
Query: 714 SKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIG 773
SK FGV+D+++L+ L D +S + A S+ S+ RAM ASRACR SIMIG
Sbjct: 855 SKATVFGVKDLEELLYLLRD--------TSAGSEAARSIRCSKARAMFASRACRKSIMIG 906
Query: 774 DALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTI 813
AL R M+ +L ++ + PWNCPHGRPTMRHLV L T+
Sbjct: 907 TALTRGRMKSVLNNMGTIEQPWNCPHGRPTMRHLVCLKTV 946
Score = 131 bits (329), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 104/205 (50%), Gaps = 35/205 (17%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSS---LKDNIITVFGMNIYNCLEPVA 140
L QAYALI KGVR+ TNT K+ S+S L N+ +FG + L P+
Sbjct: 197 LLQAYALITKGVRWTSTNTPAGGRKTPQFSVNSSTSDNYLSANVSALFGAKVVPTLMPLN 256
Query: 141 I--------------------------------CKSDSCKVEGFLSKPGQGSGRNLGDRQ 168
+ +S + V G +SKP GSGR DRQ
Sbjct: 257 LELTFSVARSPNKLIQHTVEAHGDNDDEEILPGDESSTVNVMGLISKPIHGSGRTSSDRQ 316
Query: 169 YFFVNDRPVDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDE 228
+F++N RP D +V + NE+YK NS +P +F +PT + DVN+TPDKR +F +E
Sbjct: 317 FFYINGRPWDAGRVGRAFNEVYKSYNSNHFPFVAADFRLPTDSYDVNITPDKRTIFLHEE 376
Query: 229 CSILHALREGLQEIYSPNNASYSVN 253
++ +++ L+E+++P+ A++ VN
Sbjct: 377 NRLIEKVKQALEELFAPSRATFFVN 401
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 53/77 (68%)
Query: 1 MDVETPTNSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGE 60
+D + S IR I VHRI +GQV+ DL +AVKELVEN+LDA AT+I + ++YG
Sbjct: 12 VDRNVSSGSSVIRAIPSHDVHRITSGQVVLDLQTAVKELVENALDASATNIAVNFRDYGA 71
Query: 61 EWFQVVDNGCGISPNNF 77
+ F+VVDNG GI +N+
Sbjct: 72 DSFEVVDNGTGIDASNY 88
>gi|429849239|gb|ELA24642.1| DNA mismatch repair protein pms1 [Colletotrichum gloeosporioides Nara
gc5]
Length = 1050
Score = 196 bits (497), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 111/280 (39%), Positives = 158/280 (56%), Gaps = 33/280 (11%)
Query: 549 QDLRKRRQQRLSIMQSSCHTS---GSVKMRRCFAAATLELSQPENEERKARALAAATTEL 605
+D + +Q + I + HT + +M+R + T LS E + A + L
Sbjct: 763 KDATLQHEQSIKINEGGLHTQMKLWASEMKRANSRQTNALSALGLESQDAEEV------L 816
Query: 606 ERLFRKEDFGRMKVIGQFNLGFIIG-------------KLDQDLFIVDQHAADEKYNFER 652
+ K DFG M ++GQFNLGFII D +LFI+DQHA+DEKYNFER
Sbjct: 817 SLIITKADFGNMTIVGQFNLGFIIAVRYASGKGDGGSSSSDDELFIIDQHASDEKYNFER 876
Query: 653 LSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEED--PHALAGLRFRLKA 710
L +TV+ Q L+ P +L+LT EE + ++ + NGF L+ D + GLR +L A
Sbjct: 877 LQSTTVVQSQRLVHPKQLELTALEEEIVMENIAALNTNGFQLDVDRSGNQPVGLRCKLLA 936
Query: 711 VPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSI 770
+P S TF + D+++LIS L D+Q + + PS+VR+M A RACRSS+
Sbjct: 937 LPLSHGTTFTLSDLEELISLLGDHQSNEGVSAPR---------PSKVRSMFAMRACRSSV 987
Query: 771 MIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
MIG AL +M+K++ H+ +L+ PWNCPHGRPTMRHL L
Sbjct: 988 MIGRALAHQQMEKLVRHMGELDKPWNCPHGRPTMRHLSGL 1027
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 96/192 (50%), Gaps = 17/192 (8%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCL--- 136
+ + L YA I GV+F + K + V+ T+G+ + + N++ +FG L
Sbjct: 173 KVISLLNQYACIQTGVKFTVSQQPSKGKRIVLFSTKGNPTTRGNLVNIFGAKTMMVLVKL 232
Query: 137 ------EPVAICK--------SDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKV 182
EP K S +V+G++S+P G GR DRQ FFVN RP LP+
Sbjct: 233 DMTLNFEPTGGVKNAQRIEKVSTEVRVQGYISRPAHGEGRQTPDRQMFFVNGRPCGLPQF 292
Query: 183 SKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEI 242
+K+ NE+YKG NS Q P + + T DVNV+PDKR + D+ +L LRE L +
Sbjct: 293 AKVFNEVYKGYNSSQSPFIFADIQLDTHLYDVNVSPDKRTILLHDQNRMLENLREALTAL 352
Query: 243 YSPNNASYSVNK 254
+ + S V +
Sbjct: 353 FRSQDYSIPVGQ 364
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 50/71 (70%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ I+ VH+I +GQVI DL S VKELVENS+DAGA+S+++ K G + +V DNG G
Sbjct: 4 IKAIDGRTVHQIQSGQVIVDLCSVVKELVENSIDAGASSVDVRFKNQGLDSIEVQDNGSG 63
Query: 72 ISPNNFKVRAV 82
IS +++ A+
Sbjct: 64 ISHDDYDTIAL 74
>gi|402082930|gb|EJT77948.1| hypothetical protein GGTG_03051 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 1115
Score = 196 bits (497), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 98/232 (42%), Positives = 142/232 (61%), Gaps = 28/232 (12%)
Query: 600 AATTELERLFRKEDFGRMKVIGQFNLGFII----------------GKL-DQDLFIVDQH 642
+A +L K+DF +M+++GQFNLGFI+ G++ D +LFI+DQH
Sbjct: 865 SAEAKLSLTITKDDFAKMRIVGQFNLGFILAVREAAEKETAAVSAEGRVGDDELFIIDQH 924
Query: 643 AADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALA 702
A+DEKYNFERL +TV+ Q L+RP +L+L EE + + + NGF +E D +
Sbjct: 925 ASDEKYNFERLQANTVVQSQRLVRPKQLELAALEEEIIIENQAALEANGFVVEADQSGRS 984
Query: 703 --GLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAM 760
G R RL ++P S++ TF + D+++L+S LADN + PSRVR+M
Sbjct: 985 PVGSRCRLLSLPLSRETTFSLADLEELVSLLADNPSSGATTVPR---------PSRVRSM 1035
Query: 761 LASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTT 812
A RACRSS+M+G AL R +M+K++ H+ ++ PWNCPHGRPTMRHL L +
Sbjct: 1036 FAMRACRSSVMVGRALSRAQMEKVVRHMGEMEKPWNCPHGRPTMRHLCGLAS 1087
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 109/209 (52%), Gaps = 24/209 (11%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFG---------M 130
+ V L YA I G++F + K ++V+ T+G+ + ++NI+ VFG M
Sbjct: 179 KVVNLLNQYACIQTGIKFTVSQQPTKGKRTVLFSTKGNPTTRENIVNVFGAKTLSALITM 238
Query: 131 NIYNCLEP-----VAICKSDSCK--------VEGFLSKPGQGSGRNLGDRQYFFVNDRPV 177
++ LEP VA D K V G +S+P +G GR DRQ F+VN RP
Sbjct: 239 DLELELEPTTSRGVAALAGDGSKETETTVVHVRGHVSRPARGEGRQTPDRQMFYVNGRPC 298
Query: 178 DLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALRE 237
LP+ +K+ NE+YK NS Q P + + T DVNV+PDKR + D+ +L +RE
Sbjct: 299 ALPQFAKVFNEVYKAYNSTQSPFIFADIQLDTHLYDVNVSPDKRTILLHDQGRMLDNMRE 358
Query: 238 GLQEIYSPNNASYSVNKV--EQLIEPEKS 264
L E++ + + V+++ ++L P K+
Sbjct: 359 SLIELFEKQDVTIPVSQLQSQKLTTPFKT 387
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 52/72 (72%)
Query: 7 TNSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVV 66
T +PTI+ I VH+I +GQVI DL S KELVENS+DAGAT++E+ K G + +V
Sbjct: 5 TAAPTIKAIEASTVHQIQSGQVIVDLCSVAKELVENSIDAGATAVEVRFKNQGLDSIEVQ 64
Query: 67 DNGCGISPNNFK 78
DNG GI+P+N++
Sbjct: 65 DNGYGIAPHNYE 76
>gi|240952144|ref|XP_002399323.1| DNA mismatch repair protein, putative [Ixodes scapularis]
gi|215490529|gb|EEC00172.1| DNA mismatch repair protein, putative [Ixodes scapularis]
Length = 837
Score = 195 bits (496), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 115/273 (42%), Positives = 155/273 (56%), Gaps = 31/273 (11%)
Query: 543 TLQFSIQDLRKRRQQRLSIMQSSCHTSGSVKMRRCFAAATLELSQPENEERKARALAAAT 602
TL+F + LR++ ++ C RR AA +S +N AAA
Sbjct: 592 TLEFCLSRLRQKTKES---QNDGCSEHSKPASRRFRAA----ISPSDN--------AAAE 636
Query: 603 TELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQ 662
EL + K+ FG+M++IGQFNLGFI+ KL DLFIVDQHAADEKYNFERL + TV+ Q
Sbjct: 637 NELAKEISKDMFGQMEIIGQFNLGFIVAKLGDDLFIVDQHAADEKYNFERLERDTVMKGQ 696
Query: 663 PLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVE 722
LL P L+LT E V + ++ KNGF+ E D +G + +L +VP S FG E
Sbjct: 697 KLLAPQPLELTAVNESVLIENREVFEKNGFAFEVDESQPSGRKVKLVSVPASGSWQFGKE 756
Query: 723 DVKDLISTLADNQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGRNE- 780
G+C + + +VC PS+VR M ASRACR S+M+G L +E
Sbjct: 757 -------------GKCRLFRRL-VYCQHTVCRPSKVRQMFASRACRKSVMVGMPLTISES 802
Query: 781 MQKILEHLADLNSPWNCPHGRPTMRHLVDLTTI 813
+++ HL +L+ PWNCPHGRPTMRHLV+L +
Sbjct: 803 FFQVVSHLGELHHPWNCPHGRPTMRHLVNLAIL 835
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 90/174 (51%), Gaps = 19/174 (10%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFG-------MNIYNC- 135
L Y L+A GV CTN K +VL +QGS+S+++ I VFG + I +C
Sbjct: 177 LLTGYCLVATGVNITCTNHLDGGRKQMVLSSQGSTSVRERISAVFGAKETSRLLEIEHCP 236
Query: 136 ----------LEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKL 185
L + S ++EGF+S G GR+ DRQ+ F+N RP +LPKV +L
Sbjct: 237 PSDEVLEEFSLTDAVLDDSARLRIEGFVSTCAHGGGRSSSDRQFIFINSRPCELPKVKRL 296
Query: 186 -VNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREG 238
VN +Y N QYP +N + R DVNVTPDKR VF E +L ++ G
Sbjct: 297 LVNAVYHTFNRDQYPFLFINIHLQRRDVDVNVTPDKRSVFLHHEKHLLALVKVG 350
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 52/67 (77%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ I++ VHRIC+GQV+ +L+ AVKELVENS+DAGA SI + LKEYG + +VVD+G G
Sbjct: 5 IKAIDRASVHRICSGQVVLNLAMAVKELVENSIDAGARSISVRLKEYGSKLVEVVDDGDG 64
Query: 72 ISPNNFK 78
+ NF+
Sbjct: 65 VEEANFE 71
>gi|320580322|gb|EFW94545.1| MutL family mismatch-repair protein Pms1 [Ogataea parapolymorpha
DL-1]
Length = 830
Score = 195 bits (496), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 114/286 (39%), Positives = 158/286 (55%), Gaps = 41/286 (14%)
Query: 544 LQFSIQDLRKRRQQRLSIMQSSCHTS--------GSVKMRR-------CFAAATLELSQP 588
L F + ++ L+ QSS H + GS KM++ AA +++
Sbjct: 555 LSFEPKSEKRTASATLTRTQSSLHDTELPIKASPGSFKMQKPKLEKSAGTRAAVDDITDE 614
Query: 589 ENEERKARALAAATTELERLFRKEDFGRMKVIGQFNLGFI-IGKLDQD---LFIVDQHAA 644
+ ERK L K+DF M+VIGQFNLGFI + K D+ LFI+DQHA+
Sbjct: 615 SDAERK----------LTLSVSKKDFLEMQVIGQFNLGFILVTKQDKSGTHLFIIDQHAS 664
Query: 645 DEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGL 704
DEKYNFER TV N QPL+ P +L L +E+ ++++ KNGF L D A G
Sbjct: 665 DEKYNFERYQTETVFNNQPLVIPQQLHLNIIDELAIMNNLEVFGKNGFGLRVDEDAQPGE 724
Query: 705 RFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASR 764
R L ++P+SK TFG+ D+ +L+ + ++ G + PS+VRAMLA R
Sbjct: 725 RLSLTSLPYSKDTTFGLSDLDELVHLVKEHHGRGVL------------RPSKVRAMLAMR 772
Query: 765 ACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
ACR+SIMIG L M ++ +LA L+ PWNCPHGRPTMRHL++L
Sbjct: 773 ACRTSIMIGKPLSHKTMTSVVRNLAALDKPWNCPHGRPTMRHLIEL 818
Score = 135 bits (339), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/181 (39%), Positives = 106/181 (58%), Gaps = 11/181 (6%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
+AV L Q+YALI G+R V + + K ++L T GS L+ N+++VFG N LEP+
Sbjct: 172 KAVTLLQSYALIKVGLRLVVQHVDSRGRKGIMLATSGSKQLRSNVLSVFGANGMAGLEPI 231
Query: 140 -------AICKSDSC----KVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNE 188
A K +C V G+LS G GR+ DRQ++FVN RPV L + SK + +
Sbjct: 232 DFRLNISARFKLKACDMLLSVHGYLSNCSFGKGRSATDRQFWFVNGRPVKLQQFSKAITD 291
Query: 189 LYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNA 248
+YK N Q P+ +++ + + DVNVTPDKR +F +E +I+ AL+E + EI+S +
Sbjct: 292 VYKTFNHLQCPVILLDLELDPQFIDVNVTPDKRTIFLHNEAAIIEALKERVTEIFSSQDI 351
Query: 249 S 249
S
Sbjct: 352 S 352
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 44/67 (65%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
T+ I VH I +GQVI DLS+A KEL+ENSLDAGAT + I K +G + +V DNG
Sbjct: 2 TLTRIGTADVHNITSGQVIIDLSTASKELLENSLDAGATQVTITFKNHGIDSIEVSDNGT 61
Query: 71 GISPNNF 77
GI +F
Sbjct: 62 GIDEEDF 68
>gi|321476952|gb|EFX87911.1| putative PMS1, postmeiotic segregation increased 2 protein [Daphnia
pulex]
Length = 814
Score = 195 bits (495), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 100/221 (45%), Positives = 135/221 (61%), Gaps = 9/221 (4%)
Query: 599 AAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTV 658
AAA EL R + DF +M+V+GQFNLGFII +L+ DLFI+DQHAADEKYNFE L ++T
Sbjct: 598 AAAEAELSRQISQSDFEKMEVVGQFNLGFIIARLNSDLFIIDQHAADEKYNFETLQRTTR 657
Query: 659 LNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSL----EEDPHALAGLRFRLKAVPFS 714
+ Q L+ P L+LT E + +M++ R NGF +EDP R L AVP S
Sbjct: 658 IQPQKLVCPKPLNLTAANESLLIDNMELFRSNGFDFVVNKDEDPTK----RVLLSAVPLS 713
Query: 715 KKITFGVEDVKDLISTLADN-QGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIG 773
G D+ +L+ L D+ E S+ + PSRVRAM ASRACR ++M+G
Sbjct: 714 GNWLLGPSDIDELLFMLQDSPMNEEEDRSNVSQASLARYRPSRVRAMFASRACRKAVMVG 773
Query: 774 DALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIR 814
D L +M +L +++L PWNCPHGRPTMRHL++ ++
Sbjct: 774 DPLTSVQMTNLLRQMSNLKQPWNCPHGRPTMRHLINTNVVQ 814
Score = 129 bits (323), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 100/190 (52%), Gaps = 22/190 (11%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIY-NCLEPVAIC 142
+ Y LI+K R CTN+TG S VL T+G + LKDN VFG + N LE A
Sbjct: 182 MLTGYCLISKKTRITCTNSTGGRT-STVLSTRGGAHLKDNFTLVFGQKSWQNMLEIKATQ 240
Query: 143 KSDSC--------------------KVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKV 182
S+ + EGF+S G+GR+ DRQY+F+N RP D KV
Sbjct: 241 PSEDILAEFNLNANILPDKLNEWPFQFEGFVSSCAHGTGRSCADRQYYFINGRPCDPAKV 300
Query: 183 SKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEI 242
SKLVNE+Y N QYP ++N + D+NVTPDKR++ ++E +L ++ L EI
Sbjct: 301 SKLVNEVYHSYNRNQYPSIVLNITTHSSEIDINVTPDKRQLMVANEKILLATVKASLNEI 360
Query: 243 YSPNNASYSV 252
Y ++S+
Sbjct: 361 YREIPCTFSL 370
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 57/71 (80%)
Query: 8 NSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVD 67
N I+PI+ VHRIC+GQV+ L+ AVKELVENSLD+GAT++E+ LKE+G + +V+D
Sbjct: 6 NGGIIKPIDHSTVHRICSGQVVLTLAVAVKELVENSLDSGATAVEVRLKEFGSDSVEVID 65
Query: 68 NGCGISPNNFK 78
+G GISP+NF+
Sbjct: 66 DGSGISPSNFE 76
>gi|388853212|emb|CCF53078.1| related to PMS1-DNA mismatch repair protein [Ustilago hordei]
Length = 990
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 116/282 (41%), Positives = 155/282 (54%), Gaps = 35/282 (12%)
Query: 546 FSIQDLRKRRQQRLSIMQSSCHTSGSVKMRRCFAAATLEL-------SQPENEERKARAL 598
F + L+KR Q R + S S S + A+ EL +Q EN+ +A
Sbjct: 705 FDLTGLQKRLQARKGAVALSASKSASQSLP---ASGDEELLQGAGVSNQDENQVEQA--- 758
Query: 599 AAATTELERLFRKEDFGRMKVIGQFNLGFIIGK-------LDQDLFIVDQHAADEKYNFE 651
L R+ KEDF M+V+GQFN+GFII + +D DLFIVDQHA+DEKYNFE
Sbjct: 759 ------LSRVIHKEDFSTMEVVGQFNVGFIIARRRTDYDDMD-DLFIVDQHASDEKYNFE 811
Query: 652 RLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAV 711
L +T + Q L+ P L+L+ +E+VA H D + NGF + L G R +L
Sbjct: 812 TLQLTTTIRSQKLISPRLLELSASDELVAIEHQDTLLANGFEISVSETGLPGTRVKLVTQ 871
Query: 712 PFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIM 771
P SK FGV+D+++L+ L D +S + A + S+ R M ASRACR SIM
Sbjct: 872 PISKSTVFGVKDLEELLFLLRD--------TSAGSEAARRIRCSKARNMFASRACRKSIM 923
Query: 772 IGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTI 813
IG AL + +M IL ++ + PWNCPHGRPTMRHL L TI
Sbjct: 924 IGTALNKAKMSAILRNMGTIEQPWNCPHGRPTMRHLACLKTI 965
Score = 132 bits (332), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 110/209 (52%), Gaps = 34/209 (16%)
Query: 79 VRAVFLCQAYALIAKGVRFVCTNT--TGKNVKSVVLKTQGSSS-LKDNIITVFGMNIYNC 135
+A L QAYALI KGVR+ TNT +G+ + + G+ + L N+ +FG +
Sbjct: 195 AKAQNLLQAYALITKGVRWTTTNTPASGRKTPQFSVNSSGAYNYLSTNVSALFGARVAPT 254
Query: 136 LEPVAI-------------------------------CKSDSCKVEGFLSKPGQGSGRNL 164
L P+ + ++ + V G +SKP GSGR
Sbjct: 255 LMPLNLELTFSVARARNKYLQSVARQSEQDADGEEEKDETSTVTVVGLISKPVYGSGRTS 314
Query: 165 GDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVF 224
DRQ+F++N RP + +VS+ NE+YK NS +P I +F +PT + DVNV+PDKR +F
Sbjct: 315 SDRQFFYINGRPWEAGRVSRAFNEVYKSFNSNHFPFVIADFRLPTDSYDVNVSPDKRTIF 374
Query: 225 FSDECSILHALREGLQEIYSPNNASYSVN 253
+E ++ ++E L E+++P+ A++ VN
Sbjct: 375 LHEESRLIEKVKEALDELFAPSRATFLVN 403
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 54/71 (76%)
Query: 7 TNSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVV 66
T+S IRPI VHRI +GQV+ DL +AVKEL+EN+LDA A++I I ++YG E F+V+
Sbjct: 21 TSSNVIRPIPSTDVHRITSGQVVLDLQTAVKELIENALDASASNITINFRDYGAESFEVI 80
Query: 67 DNGCGISPNNF 77
DNG GI P+N+
Sbjct: 81 DNGTGIDPSNY 91
>gi|367022212|ref|XP_003660391.1| hypothetical protein MYCTH_2298657 [Myceliophthora thermophila ATCC
42464]
gi|347007658|gb|AEO55146.1| hypothetical protein MYCTH_2298657 [Myceliophthora thermophila ATCC
42464]
Length = 1109
Score = 194 bits (494), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 97/216 (44%), Positives = 133/216 (61%), Gaps = 26/216 (12%)
Query: 611 KEDFGRMKVIGQFNLGFIIG-------------KLDQDLFIVDQHAADEKYNFERLSQST 657
K DFGRM+++GQFNLGFI+ D +LFI+DQHA+DEKYNFERL +T
Sbjct: 873 KSDFGRMRIVGQFNLGFILAVREAASLEEDRSEGADDELFIIDQHASDEKYNFERLQATT 932
Query: 658 VLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHAL--AGLRFRLKAVPFSK 715
+ Q L++P LDLT EE + H+ + +NGF + D G R +L ++P S+
Sbjct: 933 TVQSQRLVQPKTLDLTALEEEIVLEHLPDLERNGFLAQVDTSGAKPVGSRVQLLSLPLSR 992
Query: 716 KITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGD 774
+ TF + D+++L+ LADN +A +V PS+VR M A RACRSSIMIG
Sbjct: 993 ETTFSLADLEELLFLLADN----------PTSSASTVPRPSKVRKMFAMRACRSSIMIGK 1042
Query: 775 ALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
AL R +M+ ++ H+ ++ PWNCPHGRPTMRHL L
Sbjct: 1043 ALSRRQMETVVRHMGEMEKPWNCPHGRPTMRHLCGL 1078
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 101/199 (50%), Gaps = 20/199 (10%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
+ + L YA + GV+F + K + ++ T+G+S+ ++NII VFG+ N L P+
Sbjct: 176 KVISLLNQYACVQTGVKFTVSQQPTKGKRMILFSTKGNSTTRENIINVFGVKTMNALIPM 235
Query: 140 AI--------------------CKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDL 179
+ S +V G +S+P G GR DRQ F+VN RP L
Sbjct: 236 DLKLELIPTAGPLIKGKTRGGDGGSTEVRVLGHVSRPNHGEGRQTPDRQMFYVNGRPCGL 295
Query: 180 PKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGL 239
P+ +K+ NE+Y+ N+ Q P + + T DVNV+PDKR + D+ +L LRE L
Sbjct: 296 PQFAKVFNEVYRLYNASQSPFIFADIQLDTHLYDVNVSPDKRTILLHDQGQMLDNLRESL 355
Query: 240 QEIYSPNNASYSVNKVEQL 258
E++ + + V++ + L
Sbjct: 356 IELFETQDVTIPVSQSQGL 374
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 53/75 (70%)
Query: 8 NSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVD 67
+S TI+ I VH+I +GQVI DL S KELVENS+DAGAT+IE+ K G + +V D
Sbjct: 3 SSATIKAIESSTVHQIQSGQVIVDLCSVAKELVENSIDAGATAIEVRFKNQGLDSIEVQD 62
Query: 68 NGCGISPNNFKVRAV 82
NG GI+P+N++ A+
Sbjct: 63 NGSGIAPHNYESVAL 77
>gi|367045350|ref|XP_003653055.1| hypothetical protein THITE_2115054 [Thielavia terrestris NRRL 8126]
gi|347000317|gb|AEO66719.1| hypothetical protein THITE_2115054 [Thielavia terrestris NRRL 8126]
Length = 1097
Score = 194 bits (493), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 111/288 (38%), Positives = 162/288 (56%), Gaps = 34/288 (11%)
Query: 545 QFSIQDLRKRRQQRLSIMQSSCHTSGSVKMRRCFAAATLELSQPENEERKARALAA---- 600
Q ++ +R+ L+++Q T+ ++ R AA L QP + A++
Sbjct: 785 QMFVKGRARRKDMTLTLVQQVKTTADEIQRR--IAALARHLPQPRSMASAAKSSDGLDAD 842
Query: 601 -ATTELERLFRKEDFGRMKVIGQFNLGFII-----------GKL---DQDLFIVDQHAAD 645
A +L K DF +MKV+GQFNLGFI+ G+ D +LFI+DQHA+D
Sbjct: 843 DAEEKLSLKISKSDFAKMKVVGQFNLGFILAVREAEPSTEDGRAEADDDELFIIDQHASD 902
Query: 646 EKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHAL--AG 703
EKYNFERL +T + Q L++P L+LT EE + H+ + +NGF + D G
Sbjct: 903 EKYNFERLQATTTVQSQRLVQPKTLELTALEEEIILEHLPALERNGFVAQVDTSGARPVG 962
Query: 704 LRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVC-PSRVRAMLA 762
R +L ++P S++ TF V D ++L+ LADN +A +V PS+VR + A
Sbjct: 963 ARAQLLSLPLSRETTFSVADFEELLFLLADN----------PTSSATTVPRPSKVRKLFA 1012
Query: 763 SRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
RACRSSIMIG AL R +M++++ H+ ++ PWNCPHGRPTMRHL L
Sbjct: 1013 MRACRSSIMIGRALSRRQMERVVRHMGEMEKPWNCPHGRPTMRHLCGL 1060
Score = 122 bits (305), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 101/201 (50%), Gaps = 19/201 (9%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCL--- 136
+ + L YA + GV+F + K + V+ T+G+ S ++NII VFG+ N L
Sbjct: 180 KVINLLNQYACVQTGVKFTVSQQPTKGKRMVLFSTKGNPSTRENIINVFGVKTMNALVAM 239
Query: 137 ----------EPVAICK------SDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLP 180
P++ K S ++ G +S+P G GR DRQ F++N RP LP
Sbjct: 240 DLKLELIPTAGPLSKGKARADGSSTEVRILGHVSRPSHGEGRQTPDRQMFYINGRPCGLP 299
Query: 181 KVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQ 240
+ +K+ NE+Y+ N+ Q P + + TR DVNV+PDKR + D+ +L LRE L
Sbjct: 300 QFAKVFNEVYRSYNAAQSPFIFADIQLDTRLYDVNVSPDKRTILLHDQGQMLDNLRESLI 359
Query: 241 EIYSPNNASYSVNKVEQLIEP 261
E++ + + V + L P
Sbjct: 360 ELFETQDVTIPVAQAPALKPP 380
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 54/78 (69%), Gaps = 2/78 (2%)
Query: 7 TNSPTIRPINKGV--VHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQ 64
+++ TI+ I VHRI AGQVI DL S KELVENS+DAGAT+IE+ K G + +
Sbjct: 4 SSNATIKAIESSTEQVHRIQAGQVIVDLCSVAKELVENSIDAGATAIEVRFKNQGLDSIE 63
Query: 65 VVDNGCGISPNNFKVRAV 82
V DNG GI+P+N++ A+
Sbjct: 64 VQDNGSGIAPHNYESVAL 81
>gi|358399008|gb|EHK48359.1| hypothetical protein TRIATDRAFT_46780 [Trichoderma atroviride IMI
206040]
Length = 958
Score = 194 bits (493), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 102/227 (44%), Positives = 140/227 (61%), Gaps = 26/227 (11%)
Query: 601 ATTELERLFRKEDFGRMKVIGQFNLGFII-------------GKLDQDLFIVDQHAADEK 647
A ++L + K DF RMK+IGQFNLGFII GK D+ LFI+DQHA+DEK
Sbjct: 717 AESKLPLIITKGDFSRMKIIGQFNLGFIIAVKPARRMSTDSGGKHDE-LFIIDQHASDEK 775
Query: 648 YNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDP--HALAGLR 705
YN+E+L +T + Q L+ P++L LT EE + + + NGF + D + G R
Sbjct: 776 YNYEKLQNTTEIQSQRLVHPMRLRLTALEEEIILENSSALNANGFKVTIDTTGNLPVGSR 835
Query: 706 FRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRA 765
L A+P S+++TF +ED+++LIS L D E S I PS+V+ MLA RA
Sbjct: 836 CHLMALPLSREVTFKLEDLEELISLLGDKSAESSYIPR----------PSKVQKMLAMRA 885
Query: 766 CRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTT 812
CRSSIMIG A+ R++M ++ H+ +L+ PWNCPHGRPT+RHL L T
Sbjct: 886 CRSSIMIGKAMTRSQMHSLVNHMGELDKPWNCPHGRPTIRHLSRLQT 932
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 95/193 (49%), Gaps = 20/193 (10%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
+ + L YA I V+F + K + ++ T+G+ S +DNII +FG L P+
Sbjct: 173 KVIALLNQYACILTNVKFSVSQQPTKGKRILLFSTKGNPSTRDNIINIFGAKTLAALIPL 232
Query: 140 AI--------------------CKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDL 179
+ S ++ G +SKP G GR DRQ FFVN RP L
Sbjct: 233 ELDLEIKPSGTRRDVRSDENPTANSHGVRIVGHVSKPAHGEGRQTPDRQMFFVNGRPCSL 292
Query: 180 PKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGL 239
P+++K+ NE+Y+ N+ Q P + + T DVNV+PDKR + D+ ++L LR L
Sbjct: 293 PQLAKVFNEVYRLYNNSQSPFIFADVQLDTMLYDVNVSPDKRSILLHDQNNLLDTLRISL 352
Query: 240 QEIYSPNNASYSV 252
+++ + S S+
Sbjct: 353 SQLFDSHEDSISI 365
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 48/67 (71%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
TI+ I+ VH+I +GQVI DL S VKELVENS+D+GAT +++ K G + +V DNG
Sbjct: 3 TIKQIDGRSVHQIQSGQVIVDLCSVVKELVENSIDSGATILDVRFKNQGLDSIEVQDNGS 62
Query: 71 GISPNNF 77
GI+P ++
Sbjct: 63 GIAPASY 69
>gi|347840713|emb|CCD55285.1| hypothetical protein [Botryotinia fuckeliana]
Length = 325
Score = 194 bits (493), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 93/214 (43%), Positives = 136/214 (63%), Gaps = 25/214 (11%)
Query: 611 KEDFGRMKVIGQFNLGFIIG-------------KLDQDLFIVDQHAADEKYNFERLSQST 657
K DF +MK+IGQFNLGFI+ + ++FI+DQH++DEKYNFERL +T
Sbjct: 90 KSDFAKMKIIGQFNLGFILASKAPELTTENSGIQTADNVFIIDQHSSDEKYNFERLQATT 149
Query: 658 VLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHAL-AGLRFRLKAVPFSKK 716
++ Q L+ P L LT EE + + ++DI+ +NGF L D + G R +L ++P S++
Sbjct: 150 IVQSQRLVYPKTLSLTALEEEIVAENLDILEQNGFVLTIDQSSQDVGGRCQLVSLPVSRE 209
Query: 717 ITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDAL 776
TF + D+++LI+ LA++ G ++ PS+VR M A RACRSSIMIG +L
Sbjct: 210 TTFSINDLEELIALLAESGGRAGMVR-----------PSKVRKMFAMRACRSSIMIGKSL 258
Query: 777 GRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
R +M+K++ H+ ++ PWNCPHGRPTMRHL L
Sbjct: 259 TRGQMEKVVRHMGEIEQPWNCPHGRPTMRHLCGL 292
>gi|340513981|gb|EGR44253.1| predicted protein [Trichoderma reesei QM6a]
Length = 979
Score = 194 bits (492), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 111/284 (39%), Positives = 158/284 (55%), Gaps = 44/284 (15%)
Query: 554 RRQQRLSIMQSSCHTSGSVKMRRCFAAATLELSQPENEERKARALAAATTELERL----- 608
RR+ + + + H G K+R+ L P + R + A T+ +ER+
Sbjct: 685 RRKDATTCLIQNLHV-GKAKLRKM-----LRDVHPRRQSRMPDSSARGTSTVERIDASDA 738
Query: 609 -------FRKEDFGRMKVIGQFNLGFIIG-------------KLDQDLFIVDQHAADEKY 648
K DF RM++IGQFNLGFII K D+ LFI+DQHA+DEKY
Sbjct: 739 ESKLPLIISKGDFSRMRIIGQFNLGFIIAVKPANHTSSGTEAKHDE-LFIIDQHASDEKY 797
Query: 649 NFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHAL--AGLRF 706
N+ERL ++T + Q L+ P +L LT EE + + + NGF +E D G R
Sbjct: 798 NYERLQRTTEIQSQRLVHPKRLQLTALEEEIILENAAALNANGFKVETDTSGRFPVGARC 857
Query: 707 RLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRAC 766
+L ++P S+++TF +ED+++LIS L D E + I PS+VR MLA RAC
Sbjct: 858 QLTSLPLSREVTFKLEDLEELISLLGDKFSESTYIPR----------PSKVRKMLAMRAC 907
Query: 767 RSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
RSSIMIG A+ R++M ++ H+ +L+ PWNCPHGRPT+RHL L
Sbjct: 908 RSSIMIGKAMTRSQMYTLVNHMGELDKPWNCPHGRPTLRHLSRL 951
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 95/198 (47%), Gaps = 20/198 (10%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
+ + L YA I V+F + K + ++ T+G+ S +DNII +FG L P+
Sbjct: 173 KVIALLNQYACILTNVKFSVSQQPTKGKRIILFSTKGNPSTRDNIINIFGAKTLAALIPL 232
Query: 140 --------------------AICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDL 179
A S +V G +SKP G GR DRQ FFVN RP L
Sbjct: 233 DLHLELQPSGTRPDLRIGEKATPSSHDVRVVGHVSKPVHGEGRQTPDRQMFFVNGRPCSL 292
Query: 180 PKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGL 239
P+++K+ NE+Y+ N+ Q P + + T DVNV+PDKR + D+ ++L LR L
Sbjct: 293 PQLAKVFNEVYRSYNNSQSPFIFADVQLDTMLYDVNVSPDKRSILLHDQNTLLDTLRVSL 352
Query: 240 QEIYSPNNASYSVNKVEQ 257
+++ S S+ Q
Sbjct: 353 SQLFDTQEDSISIATSTQ 370
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 48/67 (71%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
TI+ I+ VH+I +GQVI DL S VKELVENS+D+GAT I++ K G + +V DNG
Sbjct: 3 TIKQIDGRTVHQIQSGQVIVDLCSVVKELVENSVDSGATIIDVRFKNQGLDSIEVQDNGS 62
Query: 71 GISPNNF 77
GISP N+
Sbjct: 63 GISPANY 69
>gi|330800737|ref|XP_003288390.1| hypothetical protein DICPUDRAFT_152626 [Dictyostelium purpureum]
gi|325081572|gb|EGC35083.1| hypothetical protein DICPUDRAFT_152626 [Dictyostelium purpureum]
Length = 956
Score = 193 bits (491), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 103/211 (48%), Positives = 140/211 (66%), Gaps = 12/211 (5%)
Query: 601 ATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLN 660
A EL + F+KE F +M VIGQFNLGFII KL DLFI+DQHAADEKYNFE LS+S ++
Sbjct: 736 AELELTKYFKKEYFKQMIVIGQFNLGFIIAKLGNDLFIIDQHAADEKYNFEMLSKSLEIS 795
Query: 661 QQPLLRPLKL-DLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITF 719
QPL++P L DLT EEE++ ++D+ +KNGF DP A + +L A P TF
Sbjct: 796 SQPLIKPDPLSDLTCEEEMIIIENIDLFKKNGFKFIIDPEAPPRNKIQLSAFPMIHGQTF 855
Query: 720 GVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRN 779
G++DV +LI L ++ S+ + P R+ +LAS+ACR SIM+G++L
Sbjct: 856 GIKDVYELIYLLKESPIPGSV----------TKIP-RLNTLLASKACRKSIMVGNSLCHK 904
Query: 780 EMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
EM+ +L +L+ L++PW CPHGRPTMRHL+D
Sbjct: 905 EMKDVLNNLSTLDNPWCCPHGRPTMRHLIDF 935
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 73/211 (34%), Positives = 109/211 (51%), Gaps = 39/211 (18%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQG-SSSLKDNIITVFGMNIYNCLEPVAIC 142
+ QAYALI+ G R C N GK ++ V+ T G +S+L+DNI ++FG + L+
Sbjct: 174 IIQAYALISTGKRITCYNQAGKAQRNCVISTSGGNSTLRDNIASIFGSKMSQSLD--EFT 231
Query: 143 KSDSC-KVEGFLSKPGQGSG-----------------------RNLGDRQYFFVNDRPVD 178
SD+ KV G +SK G G+G R+ DRQ+FF+N RP +
Sbjct: 232 ASDNLFKVNGLISKIGLGNGHGQSIGSQPSQSNGAIQSLSSLSRSCADRQFFFINGRPFE 291
Query: 179 LPKVSKLVNELYKGANSR-QYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALRE 237
K++K +N LY + R YP+ + N PT DVNVTPDKR +F E +L + +
Sbjct: 292 HSKLAKEINTLYHQFHKRGAYPVVVFNIETPTDNYDVNVTPDKRTIFIQKESQLLLLISD 351
Query: 238 GLQEIYSPNNASYSVNKVEQLIEPEKSGPSS 268
GL+ ++ KV+ + +P S P+S
Sbjct: 352 GLKTMWE---------KVQSIFDP--SAPNS 371
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 45/67 (67%), Positives = 56/67 (83%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ I+K V+ IC+GQVI DLS AVKEL+ENS+DAGATSIEI LKEYGEE +V+DNG G
Sbjct: 2 IKAIDKESVNNICSGQVIFDLSIAVKELIENSIDAGATSIEIRLKEYGEEIIEVIDNGSG 61
Query: 72 ISPNNFK 78
+ P+NF+
Sbjct: 62 VEPSNFE 68
>gi|50552768|ref|XP_503794.1| YALI0E10769p [Yarrowia lipolytica]
gi|49649663|emb|CAG79385.1| YALI0E10769p [Yarrowia lipolytica CLIB122]
Length = 893
Score = 193 bits (491), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 92/212 (43%), Positives = 134/212 (63%), Gaps = 12/212 (5%)
Query: 599 AAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTV 658
++A ++L + DF +IGQFN FII ++LFI+DQHA+DEKYNFERL + T
Sbjct: 682 SSAESKLNLTISRNDFLNFNIIGQFNEAFIIVSDPENLFIIDQHASDEKYNFERLQRDTK 741
Query: 659 LNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKIT 718
+ QP + PL ++LTP EE V S ++++++KNGF + D G + +++ P + I
Sbjct: 742 ITPQPFVNPLTVELTPLEESVVSSNLELLKKNGFLVTIDNSLPPGEKCQIRGFPQTGNIV 801
Query: 719 FGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGR 778
FG+ D ++L+ DN G DSV P +VR + ASRACR S+M+G AL
Sbjct: 802 FGMPDFRELVVLFEDNPGN------------DSVRPKKVRDVFASRACRGSVMVGTALKE 849
Query: 779 NEMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
EM +I+ +LA L+ PWNCPHGRPTMRHL+++
Sbjct: 850 KEMDRIVRNLAGLDKPWNCPHGRPTMRHLMEI 881
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 97/204 (47%), Gaps = 16/204 (7%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV---- 139
+ + YA+I VRF + T ++V L T GS + + VFG + L V
Sbjct: 175 MLETYAIIRSDVRFSIVHVTNNKNRNVQLTTDGSGDMIKTVGRVFGNELKAHLMDVNFSF 234
Query: 140 -------AICKSDS-----CKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVN 187
S+ +V G +SKP G GRN D+Q F+N RP + K+ K+
Sbjct: 235 DVNYTKRGFLSSEELPNYVVRVTGLVSKPVFGMGRNANDKQLLFINKRPFTMKKLQKVFQ 294
Query: 188 ELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNN 247
++Y Q P+ I+N +P A DVNV+PDKR + +E +++ +RE L +++ +
Sbjct: 295 DVYTSFVHLQKPVLIINLDIPPSAYDVNVSPDKRTIMLHNEVDVINCIRENLVDVFESSG 354
Query: 248 ASYSVNKVEQLIEPEKSGPSSGAE 271
S + V+ ++P S G +
Sbjct: 355 QSVPRHTVDVKVQPMSSQSYWGVK 378
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 48/66 (72%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ I+ + +I + QV+ DL+SAVKE+VENSLDA A ++EI + +YG++ +++D+G G
Sbjct: 3 IKAIDTASIRQITSAQVVTDLNSAVKEVVENSLDANAKNVEIKIFDYGKDRVEIIDDGDG 62
Query: 72 ISPNNF 77
I + F
Sbjct: 63 IPKSEF 68
>gi|367012055|ref|XP_003680528.1| hypothetical protein TDEL_0C04280 [Torulaspora delbrueckii]
gi|359748187|emb|CCE91317.1| hypothetical protein TDEL_0C04280 [Torulaspora delbrueckii]
Length = 885
Score = 193 bits (490), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 94/205 (45%), Positives = 135/205 (65%), Gaps = 14/205 (6%)
Query: 610 RKEDFGRMKVIGQFNLGFIIG----KLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLL 665
+K+DF +M+++GQFNLGFII + DLFIVDQHA+DEKYNFE L +STV Q L+
Sbjct: 679 KKDDFRKMQIVGQFNLGFIIVTRRVQDKYDLFIVDQHASDEKYNFETLQRSTVFKSQSLI 738
Query: 666 RPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVK 725
PL ++L+ +E++ H+++ KNGF L+ + G + +L ++P SKK F V+D
Sbjct: 739 APLPVELSIIDELLVMDHLEVFEKNGFKLKIEEDEEQGSKIKLISLPVSKKTLFTVDDFY 798
Query: 726 DLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKIL 785
+L+ + +N G + D++ S+VR+M A RACRSSIMIG L M K++
Sbjct: 799 ELVYLIKENGGLHT----------DNIRCSKVRSMFAMRACRSSIMIGKPLAMKTMVKVV 848
Query: 786 EHLADLNSPWNCPHGRPTMRHLVDL 810
HL++L PWNCPHGRPTMRHL++L
Sbjct: 849 RHLSELEKPWNCPHGRPTMRHLMEL 873
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 94/204 (46%), Gaps = 22/204 (10%)
Query: 82 VFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAI 141
+ L Q YALI + ++ N T K ++L T + I+++FG + L P+ +
Sbjct: 173 IALLQNYALIQEDIKMSVWNITSNKRKRLILGTSRCLEMSKKILSIFGSSSMRGLAPIDV 232
Query: 142 ----------------------CKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDL 179
V+G++SK G GR+ DRQ F+N RP++
Sbjct: 233 ELDLNPYKALINKRHADIPDYQALDYKITVQGYISKSSFGCGRSAKDRQSVFINKRPIEY 292
Query: 180 PKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGL 239
P + + NE+Y+ N+ QYP +NF++ DVNVTPDKR V +E I+ RE L
Sbjct: 293 PALLRCCNEVYRTFNNVQYPTVFLNFMLSPALIDVNVTPDKRTVMLHNERYIIEVFRENL 352
Query: 240 QEIYSPNNASYSVNKVEQLIEPEK 263
Y + + Q +EPE+
Sbjct: 353 INYYDRQEQVLPKSTLSQSLEPEQ 376
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 45/71 (63%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I I +H+I + QVI DL + VKEL++NS+DA A IE+ K+YG E + D+G G
Sbjct: 4 IAAITGHDIHKITSSQVIIDLVTCVKELIDNSIDAHAHHIEVTFKDYGMESIECSDDGDG 63
Query: 72 ISPNNFKVRAV 82
IS NF+ A+
Sbjct: 64 ISSENFECLAL 74
>gi|164423658|ref|XP_962690.2| hypothetical protein NCU08020 [Neurospora crassa OR74A]
gi|157070185|gb|EAA33454.2| hypothetical protein NCU08020 [Neurospora crassa OR74A]
Length = 894
Score = 192 bits (489), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 100/237 (42%), Positives = 136/237 (57%), Gaps = 33/237 (13%)
Query: 599 AAATTELERLFRKEDFGRMKVIGQFNLGFIIG-----------------------KLDQD 635
A A +L K DF +MK++GQFNLGFII + D +
Sbjct: 605 ADAEEKLSLKISKSDFAKMKIVGQFNLGFIIAVREASSSHSLEHSPSQQSPAATTQEDDE 664
Query: 636 LFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLE 695
LFI+DQHA+DEKYNFERL +T + Q L++P L LT EE + H+ + NGF +
Sbjct: 665 LFIIDQHASDEKYNFERLQSTTTVQSQRLVQPKPLTLTAVEEEIILEHLPALAANGFQVR 724
Query: 696 EDP--HALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVC 753
D + G R +L ++P S++ TFGV D+++LI L DN + + +
Sbjct: 725 VDTSGESAVGSRCQLLSLPLSRETTFGVADLEELIFLLGDNPTSSATTAIPR-------- 776
Query: 754 PSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
PS+VR M A RACRSSIMIG AL R +M+K++ H+ ++ PWNCPHGRPTMRHL L
Sbjct: 777 PSKVRKMFAMRACRSSIMIGRALSRPQMEKVVRHMGEMEKPWNCPHGRPTMRHLCGL 833
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 48/67 (71%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ I+ +H+I +GQVI DL S KELVEN+LDAGAT+I++ K G + +V DNG G
Sbjct: 7 IKAIDPSTIHQIQSGQVIVDLCSVAKELVENALDAGATTIDVRFKNQGLDSIEVQDNGSG 66
Query: 72 ISPNNFK 78
IS +N++
Sbjct: 67 ISSSNYE 73
>gi|321253476|ref|XP_003192745.1| ATPase [Cryptococcus gattii WM276]
gi|317459214|gb|ADV20958.1| ATPase, putative [Cryptococcus gattii WM276]
Length = 1020
Score = 192 bits (488), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 111/286 (38%), Positives = 158/286 (55%), Gaps = 25/286 (8%)
Query: 543 TLQFSIQDLRKRRQQRLSIMQSSCHTSGSVKMRRCFAAATLELSQPENEERKARALAAAT 602
T++F + LRKR + H G+ K R +L + + K LA T
Sbjct: 741 TMRFDLSRLRKR------FANAGNHQVGAQKRRVSQRLKQGDLEEAAGIKNKDSELAEET 794
Query: 603 TELERLFRKEDFGRMKVIGQFNLGFIIGKLDQD-----LFIVDQHAADEKYNFERLSQST 657
L R+ K DF +M+V GQFN GFII +L D LFI+DQHA+DEKYNFE L Q+T
Sbjct: 795 --LSRVISKADFEKMEVKGQFNKGFIIARLQSDNGTDDLFIIDQHASDEKYNFETLQQTT 852
Query: 658 VLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGL--RFRLKAVPFSK 715
+ Q L++P L LT +E+VA ++DI+ NGF + D AG R L A+P SK
Sbjct: 853 KIKAQALIKPRALHLTAGDEIVAMENIDILNANGFDVHVDETKPAGRGERISLLAIPVSK 912
Query: 716 KITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDA 775
+ F +D++ L+ L+D+ + V + RAM ASRACR S+MIG
Sbjct: 913 ETVFDFKDLEQLLQLLSDDS----------RPSGQMVRCMKARAMFASRACRKSVMIGKT 962
Query: 776 LGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKNIDENG 821
L +++M ++L ++ ++ PWNCPHGRPTMRHL L + K+ + G
Sbjct: 963 LTKSQMSQLLRNMGTIDQPWNCPHGRPTMRHLTQLNSAPKSRNIKG 1008
Score = 109 bits (272), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 108/210 (51%), Gaps = 29/210 (13%)
Query: 80 RAVFLCQAYALIA---------KGVRFVCTNTTG---KNVKSVVLKTQGSSSLKDNIITV 127
+A+ L AYAL+ GVR G + +S+ L T G L+ ++ V
Sbjct: 176 KALVLLTAYALVPASASGQDTRNGVRLKVEMIAGGGRASKRSIHLMTDGKGPLRSSVGAV 235
Query: 128 FGMNIYNCLEPVAIC-----------------KSDSCKVEGFLSKPGQGSGRNLGDRQYF 170
+G + + +E + + + + KV+G +S G G + RQ+F
Sbjct: 236 WGPSALDNVEDIDLSLEVEIDKVMARREGITERMQTVKVKGLISSAKWGCGFSTSSRQFF 295
Query: 171 FVNDRPVDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECS 230
++N RP +L KV++ +NE+YK N+ Q P+ I++F +PT + D+NV+PDKR +F E
Sbjct: 296 YINGRPCNLTKVARAINEVYKSFNTNQLPLVILDFKIPTESVDINVSPDKRTIFVHSEDC 355
Query: 231 ILHALREGLQEIYSPNNASYSVNKVEQLIE 260
++ +L+ L+ ++P+ +++V + ++
Sbjct: 356 LIDSLKTALESFFAPSRNTFTVEGASRTVK 385
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 54/68 (79%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
+I+ I+ ++HRI +GQV+ DL SA+KEL+ENSLDAGAT+I++ +K+ G + +VVDNG
Sbjct: 4 SIKAIDTSLIHRIHSGQVVLDLQSAIKELLENSLDAGATAIDVRIKDNGLDSIEVVDNGS 63
Query: 71 GISPNNFK 78
GI+ +++
Sbjct: 64 GIAEADWE 71
>gi|39979139|emb|CAE85513.1| related to DNA mismatch repair protein PMS1 [Neurospora crassa]
Length = 1157
Score = 192 bits (488), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 110/282 (39%), Positives = 151/282 (53%), Gaps = 36/282 (12%)
Query: 557 QRLSIMQSSCHTSGSVKMRRCFAAATLELSQPENEERKAR-ALAAATTE--LERLFRKED 613
QRL + + + + A T S E+ + K L AA E L K D
Sbjct: 823 QRLKTSEGDIRSRMEIWAKHLPRAGTASSSTQESSDGKPTIGLDAADAEEKLSLKISKSD 882
Query: 614 FGRMKVIGQFNLGFIIG-----------------------KLDQDLFIVDQHAADEKYNF 650
F +MK++GQFNLGFII + D +LFI+DQHA+DEKYNF
Sbjct: 883 FAKMKIVGQFNLGFIIAVREASSSHSLEHSPSQQSPAATTQEDDELFIIDQHASDEKYNF 942
Query: 651 ERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDP--HALAGLRFRL 708
ERL +T + Q L++P L LT EE + H+ + NGF + D + G R +L
Sbjct: 943 ERLQSTTTVQSQRLVQPKPLTLTAVEEEIILEHLPALAANGFQVRVDTSGESAVGSRCQL 1002
Query: 709 KAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRS 768
++P S++ TFGV D+++LI L DN + + + PS+VR M A RACRS
Sbjct: 1003 LSLPLSRETTFGVADLEELIFLLGDNPTSSATTAIPR--------PSKVRKMFAMRACRS 1054
Query: 769 SIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
SIMIG AL R +M+K++ H+ ++ PWNCPHGRPTMRHL L
Sbjct: 1055 SIMIGRALSRPQMEKVVRHMGEMEKPWNCPHGRPTMRHLCGL 1096
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 102/209 (48%), Gaps = 20/209 (9%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFG---------M 130
+ V L YA I V+F + K + V+ T+G+ + ++NII VFG M
Sbjct: 176 KVVNLLNQYACIQTSVKFTVSQQPTKGKRMVLFSTKGNPTTRENIINVFGIKTMTALIAM 235
Query: 131 NIYNCLEPV-------AICKSDSCKVE----GFLSKPGQGSGRNLGDRQYFFVNDRPVDL 179
++ L+P + D E G +S+P G GR DRQ F+VN RP L
Sbjct: 236 DLRLQLKPTNTGLLAKMTAQDDDAMTEVRICGHISRPAHGEGRQTPDRQMFYVNGRPCGL 295
Query: 180 PKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGL 239
P+ +K+ NE+Y+ NS Q P + + T DVNV+PDKR + D+ +L LRE L
Sbjct: 296 PQFAKVFNEVYRSYNSTQSPFIFADIQLDTHLYDVNVSPDKRTILLHDQGQMLDNLRESL 355
Query: 240 QEIYSPNNASYSVNKVEQLIEPEKSGPSS 268
E++ + + V+ + L GPS+
Sbjct: 356 IELFELQDVTIPVSHTQLLKGSTFRGPST 384
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 50/71 (70%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ I+ +H+I +GQVI DL S KELVEN+LDAGAT+I++ K G + +V DNG G
Sbjct: 7 IKAIDPSTIHQIQSGQVIVDLCSVAKELVENALDAGATTIDVRFKNQGLDSIEVQDNGSG 66
Query: 72 ISPNNFKVRAV 82
IS +N++ A+
Sbjct: 67 ISSSNYESIAL 77
>gi|443899579|dbj|GAC76910.1| DNA mismatch repair protein - MLH2/PMS1/Pms2 family [Pseudozyma
antarctica T-34]
Length = 915
Score = 192 bits (487), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 104/230 (45%), Positives = 133/230 (57%), Gaps = 21/230 (9%)
Query: 605 LERLFRKEDFGRMKVIGQFNLGFII--------GKLDQ--DLFIVDQHAADEKYNFERLS 654
L R+ K+DF M VIGQFNLGFII G D+ DLFIVDQHA+DEKYNFE L
Sbjct: 682 LSRVIHKQDFASMDVIGQFNLGFIIARRRTEPSGSADEMDDLFIVDQHASDEKYNFETLQ 741
Query: 655 QSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFS 714
+T + Q L+ P L+L+ +E+VA H + NGF + L G R +L A P S
Sbjct: 742 LTTQIRSQKLICPRALELSASDELVAIEHQSTLLANGFEIAVSESGLPGTRVKLVAQPIS 801
Query: 715 KKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGD 774
K FGV+D+++L+ L D S + +V S+ R+M ASRACR S+MIG
Sbjct: 802 KTTVFGVKDLEELLYLLRD--------MSAGTEATRAVRCSKARSMFASRACRKSVMIGT 853
Query: 775 ALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKNIDENGAGC 824
AL + M IL ++ + PWNCPHGRPTMRHL L T+ D N GC
Sbjct: 854 ALNKARMGSILANMGTIEQPWNCPHGRPTMRHLACLQTL---ADMNPRGC 900
Score = 129 bits (325), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 108/209 (51%), Gaps = 34/209 (16%)
Query: 79 VRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSS---LKDNIITVFGMNIYNC 135
+A L QAYALI KGVR+ TN K+ SS+ L N+ +FG +
Sbjct: 184 AKAQNLLQAYALITKGVRWTTTNQPSGGRKTPQFSVNSSSADNYLAANVSALFGAKVAPS 243
Query: 136 LEPVAI----C---------------------------KSDSCKVEGFLSKPGQGSGRNL 164
L P+++ C + + V G +SKP GSGR
Sbjct: 244 LMPLSLELTFCTARKGLTAVQKRGERDDDEGDEEETADAASTVTVVGLISKPVYGSGRTS 303
Query: 165 GDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVF 224
DRQ+F++N RP + +VS+ NE+YK NS +P I +F +PT + DVNV+PDKR +F
Sbjct: 304 SDRQFFYINGRPWEAGRVSRAFNEVYKSFNSNHFPFIIADFRLPTDSYDVNVSPDKRTIF 363
Query: 225 FSDECSILHALREGLQEIYSPNNASYSVN 253
+E ++ +++ L+E+++P+ A++ VN
Sbjct: 364 LHEESRLIEKVKQALEELFAPSRATFLVN 392
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 50/66 (75%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR I VHRI +GQV+ DL +AVKEL+EN+LDA A++I I ++YG + F+VVDNG G
Sbjct: 15 IRAIPTSDVHRITSGQVVLDLQTAVKELIENALDASASNIAINFRDYGADSFEVVDNGSG 74
Query: 72 ISPNNF 77
I P+N+
Sbjct: 75 IDPSNY 80
>gi|380493498|emb|CCF33836.1| DNA mismatch repair protein MutL [Colletotrichum higginsianum]
Length = 1061
Score = 192 bits (487), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 98/221 (44%), Positives = 138/221 (62%), Gaps = 24/221 (10%)
Query: 605 LERLFRKEDFGRMKVIGQFNLGFIIG------------KLDQDLFIVDQHAADEKYNFER 652
L + K DF +M ++GQFNLGFII D +LFI+DQHA+DEKYNFER
Sbjct: 827 LSLIISKSDFAKMTIVGQFNLGFIIAVRHAPRDEDGGISGDDELFIIDQHASDEKYNFER 886
Query: 653 LSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHA--LAGLRFRLKA 710
L +TV+ Q L+ P +LDLT EE + ++ + NGF + D G R +L A
Sbjct: 887 LQSTTVVQSQRLVHPKQLDLTALEEEIIMENIPALDVNGFKVGVDSSGDQPVGSRCKLLA 946
Query: 711 VPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSS 769
+P S++ TF + D+++L+S L D+ + +T+ SV PS+VR+M A RACRSS
Sbjct: 947 LPLSRETTFTLSDLEELVSLLGDH---------HLTETSSSVPRPSKVRSMFAMRACRSS 997
Query: 770 IMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
+MIG AL + +M+K++ H+ +L+ PWNCPHGRPTMRHL L
Sbjct: 998 VMIGKALAQRQMEKLVRHMGELDKPWNCPHGRPTMRHLSGL 1038
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 103/200 (51%), Gaps = 21/200 (10%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCL--- 136
+ + L YA I GV+F + K + V+ T+G+ + ++N++ +FG L
Sbjct: 173 KVIALLNQYACIQTGVKFSVSQQPTKGKRIVLFSTKGNPTTRENLVNIFGAKTMTVLVKL 232
Query: 137 ------EPVA------ICK----SDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLP 180
EP + + K S +V+G++S+P G GR DRQ FFVN RP LP
Sbjct: 233 DLPLEFEPTSGPGLKSVVKDKQASTEVRVQGYVSRPAHGEGRQTPDRQMFFVNGRPCGLP 292
Query: 181 KVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQ 240
+ +K+ NE+YK N+ Q P + + T DVNV+PDKR + D+ +L +L+E L
Sbjct: 293 QFAKVFNEVYKAYNASQSPFIFADIQLDTHLYDVNVSPDKRTIMLHDQNRMLESLKEALA 352
Query: 241 EIYSPNNASYSVNKVEQLIE 260
++ + YS+ +QL +
Sbjct: 353 SLFQSQD--YSIPAAQQLTQ 370
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 53/72 (73%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
TI+PI VH+I +GQVI DL S VKELVENS+DAGA+SI++ K G + +V DNG
Sbjct: 3 TIKPIEGRTVHQIQSGQVIVDLCSVVKELVENSIDAGASSIDVRFKNQGLDSIEVQDNGS 62
Query: 71 GISPNNFKVRAV 82
GISP+N++ A+
Sbjct: 63 GISPDNYETIAL 74
>gi|256077973|ref|XP_002575273.1| DNA mismatch repair protein PMS2 [Schistosoma mansoni]
Length = 808
Score = 192 bits (487), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 94/211 (44%), Positives = 132/211 (62%), Gaps = 15/211 (7%)
Query: 601 ATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLN 660
A EL F+KE F +KVIGQFNLGFII + +QDLFI+DQHA+DEKY FE+LS++
Sbjct: 607 AENELTTYFKKETFNSLKVIGQFNLGFIIAQHNQDLFIIDQHASDEKYRFEQLSENYRFK 666
Query: 661 QQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFG 720
QPL+ P KL+LT E V ++D+ +NGF+ AG + L A P + F
Sbjct: 667 SQPLVVPQKLNLTITNEQVLINNLDVFARNGFAFRIHSDEPAGQQISLVAAPMLENKLFS 726
Query: 721 VEDVKDLISTLADNQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGRN 779
D+++++ L+ +T + C PSR+R +LASR+CRS++MIG AL
Sbjct: 727 YRDIEEMLFVLS--------------ETCNKKCRPSRLRDILASRSCRSAVMIGTALDHK 772
Query: 780 EMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
+M++IL ++ ++ PWNCPHGRPTMRHL L
Sbjct: 773 KMKRILTNMGSMDHPWNCPHGRPTMRHLYHL 803
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 94/218 (43%), Gaps = 60/218 (27%)
Query: 74 PNNFKVRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFG-MNI 132
P F + L AY L++ GV+ C+ K V+ S SLKDNI VFG +
Sbjct: 176 PKEF-AEVISLLTAYCLVSIGVQISCSRIGKKGELINVISNGPSISLKDNISAVFGHAQL 234
Query: 133 YNCLE-------PVAICK---------SDSCKVEGFLSKP-----------GQGS----- 160
N +E P IC+ S K+ G++SKP G S
Sbjct: 235 DNLVELEQIDTIPEDICEEFNIKSSSIGHSIKISGYVSKPPDPSTNTSSLIGNSSPSPLL 294
Query: 161 --------GRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQY-------------- 198
G + +RQ+ ++N RP DLPK+++L +L++ + Y
Sbjct: 295 ANKRRTSIGYSSSERQFIYINGRPCDLPKITRLATDLWRRCSKEAYSSITSGISLPNRST 354
Query: 199 ----PIAIMNFIVPTRACDVNVTPDKRKVFFSDECSIL 232
P+ I+ F +PT++ D+N+TPDKR + E ++
Sbjct: 355 TSTFPVLILLFTMPTQSVDINLTPDKRTLLLHHENYVM 392
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 52/68 (76%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
TI ++K +VH+IC+GQV+ L+SAVKEL+ENS+DA ++ IEI L+ +G E +V+DNG
Sbjct: 10 TISRLDKNLVHKICSGQVVVTLASAVKELLENSIDAKSSKIEIRLRGHGSESIEVIDNGV 69
Query: 71 GISPNNFK 78
GI +F+
Sbjct: 70 GIREEDFE 77
>gi|336471360|gb|EGO59521.1| hypothetical protein NEUTE1DRAFT_128886 [Neurospora tetrasperma FGSC
2508]
gi|350292457|gb|EGZ73652.1| hypothetical protein NEUTE2DRAFT_149656 [Neurospora tetrasperma FGSC
2509]
Length = 1157
Score = 192 bits (487), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 100/237 (42%), Positives = 136/237 (57%), Gaps = 33/237 (13%)
Query: 599 AAATTELERLFRKEDFGRMKVIGQFNLGFIIG-----------------------KLDQD 635
A A +L K DF +MK++GQFNLGFII + D +
Sbjct: 868 ADAEEKLSLKISKSDFAKMKIVGQFNLGFIIAVREASSSHSLEHSPTQQSPAATTQEDDE 927
Query: 636 LFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLE 695
LFI+DQHA+DEKYNFERL +T + Q L++P L LT EE + H+ + NGF +
Sbjct: 928 LFIIDQHASDEKYNFERLQSTTTVQSQRLVQPKPLTLTAVEEEIILEHLPALAANGFQVR 987
Query: 696 EDP--HALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVC 753
D + G R +L ++P S++ TFGV D+++LI L DN + + +
Sbjct: 988 VDTSGESAVGSRCQLLSLPLSRETTFGVADLEELIFLLGDNPTSSATTAIPR-------- 1039
Query: 754 PSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
PS+VR M A RACRSSIMIG AL R +M+K++ H+ ++ PWNCPHGRPTMRHL L
Sbjct: 1040 PSKVRKMFAMRACRSSIMIGRALSRPQMEKVVRHMGEMEKPWNCPHGRPTMRHLCGL 1096
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 103/210 (49%), Gaps = 20/210 (9%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFG---------M 130
+ V L YA I GV+F + K + V+ T+G+ + ++NII VFG M
Sbjct: 176 KVVNLLNQYACIQTGVKFTVSQQPTKGKRMVLFSTKGNPTTRENIINVFGIKTMTALIAM 235
Query: 131 NIYNCLEPV-------AICKSDSCKVE----GFLSKPGQGSGRNLGDRQYFFVNDRPVDL 179
++ L+P + D E G +S+P G GR DRQ F+VN RP L
Sbjct: 236 DLRLQLKPTNTGLLAKVTAQDDDAMTEVRICGHISRPAHGEGRQTPDRQMFYVNGRPCGL 295
Query: 180 PKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGL 239
P+ +K+ NE+Y+ NS Q P + + T DVNV+PDKR + D+ +L LRE L
Sbjct: 296 PQFAKVFNEVYRSYNSTQSPFIFADIQLDTHLYDVNVSPDKRTILLHDQGQMLDNLRESL 355
Query: 240 QEIYSPNNASYSVNKVEQLIEPEKSGPSSG 269
E++ + + V+ + L GPS+
Sbjct: 356 IELFELQDVTIPVSHTQPLKSSTFRGPSTA 385
Score = 72.4 bits (176), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 50/71 (70%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ I+ +H+I +GQVI DL S KELVEN+LDAGAT+I++ K G + +V DNG G
Sbjct: 7 IKAIDPSTIHQIQSGQVIVDLCSVAKELVENALDAGATTIDVRFKNQGLDSIEVQDNGSG 66
Query: 72 ISPNNFKVRAV 82
IS +N++ A+
Sbjct: 67 ISSSNYESIAL 77
>gi|255933019|ref|XP_002557980.1| Pc12g11630 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582599|emb|CAP80790.1| Pc12g11630 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 846
Score = 192 bits (487), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 97/206 (47%), Positives = 138/206 (66%), Gaps = 14/206 (6%)
Query: 611 KEDFGRMKVIGQFNLGFII----GKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLR 666
K DF +M++IGQFNLGFII G+ +LFI+DQHA+DEK+NFERL TV+ Q L+R
Sbjct: 616 KNDFAQMRIIGQFNLGFIIAVRPGEDHDELFIIDQHASDEKFNFERLQAETVVQNQRLVR 675
Query: 667 PLKLDLTPEEEVVASMHMDIIRKNGF--SLEEDPHALAGLRFRLKAVPFSKKITFGVEDV 724
P +LDLT EE V + + KNGF +++E G R +L ++P SK++ FGV D+
Sbjct: 676 PQRLDLTAVEEEVVLENRVALEKNGFLVTVDESGDEPIGRRCQLVSLPLSKEVVFGVRDL 735
Query: 725 KDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKI 784
++LI L++ SI +S ++ PS+VR M A RACRSSIMIG L +M+++
Sbjct: 736 EELIVLLSE-----SISTSNELSVPR---PSKVRKMFAMRACRSSIMIGKTLTSRQMERV 787
Query: 785 LEHLADLNSPWNCPHGRPTMRHLVDL 810
++++ ++ PWNCPHGRPTMRHL+ L
Sbjct: 788 VQNMGTIDKPWNCPHGRPTMRHLMSL 813
Score = 122 bits (307), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 66/175 (37%), Positives = 91/175 (52%), Gaps = 15/175 (8%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCL------- 136
L AYA I+ GVRF NT GK VV T G+ + K+NI V+G + L
Sbjct: 181 LLHAYACISTGVRFSVRNTVGKTRNVVVFSTNGNKTTKENIANVYGAKTLSALISLDLDL 240
Query: 137 --EPVAICKS------DSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNE 188
EP A K +V G +S+P G GR DRQ FFVN RP LP++ K NE
Sbjct: 241 EFEPSAATKRVGDDQPSKIQVRGHISRPVFGEGRQTPDRQMFFVNSRPCGLPQIQKAFNE 300
Query: 189 LYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIY 243
+YK N Q +F + T A DVNV+PDKR++ D +++ +L+ L +++
Sbjct: 301 VYKSFNVSQSAFIFADFQMDTGAYDVNVSPDKRQILLHDAGAMIESLKGSLAQLF 355
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 44/59 (74%)
Query: 20 VHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFK 78
VH+I +GQVI DL S KELVENSLDAGAT+IE+ K G + +V DNG GISP N++
Sbjct: 16 VHQIQSGQVIVDLCSVAKELVENSLDAGATTIEVRFKNNGLDLIEVQDNGSGISPENYE 74
>gi|339522103|gb|AEJ84216.1| mismatch repair endonuclease PMS2 [Capra hircus]
Length = 191
Score = 191 bits (486), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 96/203 (47%), Positives = 127/203 (62%), Gaps = 15/203 (7%)
Query: 615 GRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTP 674
M++IGQFNLGFI KL+ +FIVDQHA DEKYNFE L Q TVL Q L+ P L LT
Sbjct: 3 AEMEIIGQFNLGFISTKLNAAIFIVDQHATDEKYNFEMLQQHTVLQGQRLIAPQTLSLTA 62
Query: 675 EEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADN 734
E + +++I RKNG D HA R +L ++P SK TFG +D+ +L+ L+D+
Sbjct: 63 GNEAILIENLEIFRKNGVDFAIDEHAPVTERAKLISLPTSKNWTFGPQDIDELLFMLSDS 122
Query: 735 QGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNS 793
G +C PSRVR M ASRACR S+MIG L +EM+K++ H +++
Sbjct: 123 PG--------------VMCRPSRVRQMFASRACRKSVMIGTPLNTSEMKKLITHTGEMDH 168
Query: 794 PWNCPHGRPTMRHLVDLTTIRKN 816
PWNCPHGRPTMRH+ +L I ++
Sbjct: 169 PWNCPHGRPTMRHIANLDVISQS 191
>gi|156843433|ref|XP_001644784.1| hypothetical protein Kpol_1020p35 [Vanderwaltozyma polyspora DSM
70294]
gi|156115434|gb|EDO16926.1| hypothetical protein Kpol_1020p35 [Vanderwaltozyma polyspora DSM
70294]
Length = 957
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 95/213 (44%), Positives = 137/213 (64%), Gaps = 14/213 (6%)
Query: 611 KEDFGRMKVIGQFNLGFIIGKLD----QDLFIVDQHAADEKYNFERLSQSTVLNQQPLLR 666
K+DF RM+++GQFNLGFII DLFI+DQHA+DEKYNFE L +STV Q L+
Sbjct: 752 KDDFNRMEIVGQFNLGFIIATRKVGDKYDLFIIDQHASDEKYNFETLQKSTVFKSQKLIV 811
Query: 667 PLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKD 726
P ++L+ +E++ ++ I KNGF +E D G + +L ++P SK+ F + D +
Sbjct: 812 PQPVELSVIDELLVIENIGIFEKNGFKIEVDEDDTQGNKIKLVSLPVSKRTLFDINDFME 871
Query: 727 LISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILE 786
L+ + +N G II S D C +++R+M A RACR+SIMIG L + M K+++
Sbjct: 872 LLHLIKNNVG---IIKS------DIKC-TKIRSMFAMRACRTSIMIGKPLTKKTMSKVVK 921
Query: 787 HLADLNSPWNCPHGRPTMRHLVDLTTIRKNIDE 819
HL++L+ PWNCPHGRPTMRHL++L ID+
Sbjct: 922 HLSELHKPWNCPHGRPTMRHLMELKQWDNFIDD 954
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 94/187 (50%), Gaps = 22/187 (11%)
Query: 79 VRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP 138
+ + L Q+YA+I V+F + T K +L T ++S++ NI+++FG N + L
Sbjct: 170 TKCINLIQSYAIIQNDVKFTVWHVTPSGKKQQILSTLRNNSIQKNILSIFGSNSLHGLSD 229
Query: 139 V---------------------AICKSD-SCKVEGFLSKPGQGSGRNLGDRQYFFVNDRP 176
+ + D + +G +SK G GR DRQY ++N RP
Sbjct: 230 IDAEIDLNPYKPSFGNKYVMDTGFEQLDYKIRAKGLISKNSFGCGRTSKDRQYVYINKRP 289
Query: 177 VDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALR 236
++ ++K NE+Y+ N+ QYP ++F + + D+N+TPDKR + F +E ++ +
Sbjct: 290 IEYSLINKCCNEIYRQYNNVQYPAFFIDFEISSELIDINITPDKRTILFHNERYVIDVFK 349
Query: 237 EGLQEIY 243
E L + Y
Sbjct: 350 EELIKYY 356
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 50/71 (70%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I + K VHRI +GQVI DL++AVKEL++NS+DA A I+I LK YG + + D+G G
Sbjct: 4 IASLGKSDVHRITSGQVIIDLTTAVKELIDNSIDASAKQIDITLKNYGIDSIECSDDGVG 63
Query: 72 ISPNNFKVRAV 82
IS +N++ A+
Sbjct: 64 ISVDNYESLAL 74
>gi|350645954|emb|CCD59361.1| DNA mismatch repair protein PMS2, putative [Schistosoma mansoni]
Length = 706
Score = 191 bits (485), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 94/211 (44%), Positives = 132/211 (62%), Gaps = 15/211 (7%)
Query: 601 ATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLN 660
A EL F+KE F +KVIGQFNLGFII + +QDLFI+DQHA+DEKY FE+LS++
Sbjct: 505 AENELTTYFKKETFNSLKVIGQFNLGFIIAQHNQDLFIIDQHASDEKYRFEQLSENYRFK 564
Query: 661 QQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFG 720
QPL+ P KL+LT E V ++D+ +NGF+ AG + L A P + F
Sbjct: 565 SQPLVVPQKLNLTITNEQVLINNLDVFARNGFAFRIHSDEPAGQQISLVAAPMLENKLFS 624
Query: 721 VEDVKDLISTLADNQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGRN 779
D+++++ L+ +T + C PSR+R +LASR+CRS++MIG AL
Sbjct: 625 YRDIEEMLFVLS--------------ETCNKKCRPSRLRDILASRSCRSAVMIGTALDHK 670
Query: 780 EMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
+M++IL ++ ++ PWNCPHGRPTMRHL L
Sbjct: 671 KMKRILTNMGSMDHPWNCPHGRPTMRHLYHL 701
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 52/68 (76%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
TI ++K +VH+IC+GQV+ L+SAVKEL+ENS+DA ++ IEI L+ +G E +V+DNG
Sbjct: 10 TISRLDKNLVHKICSGQVVVTLASAVKELLENSIDAKSSKIEIRLRGHGSESIEVIDNGV 69
Query: 71 GISPNNFK 78
GI +F+
Sbjct: 70 GIREEDFE 77
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 75/179 (41%), Gaps = 42/179 (23%)
Query: 74 PNNFKVRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFG-MNI 132
P F + L AY L++ GV+ C+ K V+ S SLKDNI VFG +
Sbjct: 176 PKEF-AEVISLLTAYCLVSIGVQISCSRIGKKGELINVISNGPSISLKDNISAVFGHAQL 234
Query: 133 YNCLE-------PVAICK---------SDSCKVEGFLSKP-----------GQGS----- 160
N +E P IC+ S K+ G++SKP G S
Sbjct: 235 DNLVELEQIDTIPEDICEEFNIKSSSIGHSIKISGYVSKPPDPSTNTSSLIGNSSPSPLL 294
Query: 161 --------GRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRA 211
G + +RQ+ ++N RP DLPK+++L +L++ + Y +P R+
Sbjct: 295 ANKRRTSIGYSSSERQFIYINGRPCDLPKITRLATDLWRRCSKEAYSSITSGISLPNRS 353
>gi|254580625|ref|XP_002496298.1| ZYRO0C15180p [Zygosaccharomyces rouxii]
gi|238939189|emb|CAR27365.1| ZYRO0C15180p [Zygosaccharomyces rouxii]
Length = 913
Score = 191 bits (485), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 92/205 (44%), Positives = 131/205 (63%), Gaps = 14/205 (6%)
Query: 610 RKEDFGRMKVIGQFNLGFIIGKL----DQDLFIVDQHAADEKYNFERLSQSTVLNQQPLL 665
+K DF M+++GQFNLGFII + DLFIVDQHA+DEK+NFE L ++T+ Q L+
Sbjct: 707 KKSDFDHMQIVGQFNLGFIICTRRIGSNYDLFIVDQHASDEKFNFENLQKTTIFKSQKLI 766
Query: 666 RPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVK 725
PL +DL+ +E+ ++ + NGF L + G + +L ++P SK FG++D
Sbjct: 767 APLDVDLSAIDELAVMDNLKVFENNGFKLCIQDDEIEGTKVQLTSLPVSKNTIFGIDDFY 826
Query: 726 DLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKIL 785
+L+ L +NQG DS+ S++R+MLA RACRSSIMIG L + M K++
Sbjct: 827 ELVHLLKENQGI----------NRDSIKCSKIRSMLAMRACRSSIMIGKPLTQKTMCKVV 876
Query: 786 EHLADLNSPWNCPHGRPTMRHLVDL 810
HL+ L+ PWNCPHGRPTMRHL++L
Sbjct: 877 RHLSGLDKPWNCPHGRPTMRHLMEL 901
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 89/187 (47%), Gaps = 22/187 (11%)
Query: 79 VRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP 138
+ + + Q+Y++I ++F + T K++ L T + + I+++FG + L
Sbjct: 170 AKCLTMLQSYSVIQDDIKFSVWHVTSNGRKTLALSTTRNQGISKRILSIFGSSSIRGLSE 229
Query: 139 VAICKS----------------------DSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRP 176
V + +V+G +S+ G GR DRQ ++N RP
Sbjct: 230 VDLTLDLNPFKGQMLRKYAEDPDFESLDYQIRVQGLISRNSFGCGRTAKDRQLVYINRRP 289
Query: 177 VDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALR 236
VD P + + NE+YK N+ QYP +NF + + D+NVTPDKR V +E ++ LR
Sbjct: 290 VDYPVIIQCCNEVYKSFNNVQYPAFFLNFELSPQLIDINVTPDKRTVLLHNEKYVIDVLR 349
Query: 237 EGLQEIY 243
E L + +
Sbjct: 350 ETLTKYF 356
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 44/63 (69%)
Query: 20 VHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFKV 79
+HRI +GQV+ DL++A+KEL++NS+DA A IE+ LK YG E + D+G GI N +
Sbjct: 12 IHRITSGQVVIDLTTALKELIDNSIDANAHHIEVVLKNYGIESIECSDDGDGIEKENHEF 71
Query: 80 RAV 82
A+
Sbjct: 72 LAL 74
>gi|409043020|gb|EKM52503.1| hypothetical protein PHACADRAFT_260955, partial [Phanerochaete
carnosa HHB-10118-sp]
Length = 364
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 99/230 (43%), Positives = 141/230 (61%), Gaps = 31/230 (13%)
Query: 605 LERLFRKEDFGRMKVIGQFNLGFII--------GKLD-----QDLFIVDQHAADEKYNFE 651
L R+ K+DF M+++GQFNLGFII G D DLFIVDQHAADEKYNFE
Sbjct: 148 LSRVITKDDFASMEILGQFNLGFIIVRRYGVHAGSADSAFPVDDLFIVDQHAADEKYNFE 207
Query: 652 RLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLE----EDPHALAGLRFR 707
L Q+T +N Q L+RP L+LT +E++A ++DI+R+NGF ++ + + R R
Sbjct: 208 TLQQTTKINSQALIRPKLLELTASDELLALENIDILRQNGFEIDTEGGSEEQGESRRRLR 267
Query: 708 LKAVPFSKKITFGVEDVKDLISTLADN-QGECSIISSYKMDTADSVCPSRVRAMLASRAC 766
L A P SK F ++D+++L+ L D +G+ V S+ RAM ASRAC
Sbjct: 268 LVAQPVSKSTVFDIKDLEELLHLLRDRPRGQM-------------VRCSKARAMFASRAC 314
Query: 767 RSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKN 816
R S+M+G L +M I+ H+ ++ PWNCPHGRPTMRHL D++++ ++
Sbjct: 315 RKSVMVGMPLKTQQMTAIVRHMGTMDQPWNCPHGRPTMRHLSDISSLGRD 364
>gi|390597109|gb|EIN06509.1| hypothetical protein PUNSTDRAFT_72337 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 369
Score = 191 bits (484), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 103/247 (41%), Positives = 143/247 (57%), Gaps = 37/247 (14%)
Query: 585 LSQPENEERKARALAAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQ---------- 634
L ++ E+ A ALA R+ K DF M V+GQFNLGFII + Q
Sbjct: 124 LKNADDNEKAADALA-------RVITKSDFETMDVLGQFNLGFIITRRRQWQTNDHEADV 176
Query: 635 -------DLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDII 687
DLFI+DQHAADEKYNFE L Q+T + Q L RP L+LT +E+V + +++++
Sbjct: 177 ENKPFSDDLFIIDQHAADEKYNFETLQQTTKIQSQRLFRPRPLELTAADELVVTENIEVL 236
Query: 688 RKNGFSLEEDPHALAGL-RFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKM 746
R+NGF + D +A G R +L A P SK F ++D+++L+ + D
Sbjct: 237 RQNGFDVAVDENASFGQGRLQLVAQPVSKNTVFDMKDLEELLHLMQDRP----------- 285
Query: 747 DTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRH 806
T V S+ +AM ASRACR S+MIGD L R +M+ ++ H+ ++ PWNCPHGRPTMRH
Sbjct: 286 -TGRMVRCSKAQAMFASRACRKSVMIGDPLTRKQMRSVVRHMGTMDQPWNCPHGRPTMRH 344
Query: 807 LVDLTTI 813
L DL +
Sbjct: 345 LSDLRAL 351
>gi|310792029|gb|EFQ27556.1| DNA mismatch repair protein MutL [Glomerella graminicola M1.001]
Length = 1060
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 96/220 (43%), Positives = 136/220 (61%), Gaps = 22/220 (10%)
Query: 605 LERLFRKEDFGRMKVIGQFNLGFIIG------------KLDQDLFIVDQHAADEKYNFER 652
L + K DF +M ++GQFNLGFII D +LFI+DQHA+DEKYNFER
Sbjct: 826 LSLIISKSDFAKMTIVGQFNLGFIIAVRNATRDGEGDPSGDDELFIIDQHASDEKYNFER 885
Query: 653 LSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHAL--AGLRFRLKA 710
L +TV+ Q L+ P +L+LT EE + ++ + NGF + D G R +L A
Sbjct: 886 LQSTTVVQSQRLVHPKQLELTALEEEIVMENISALDVNGFKVSVDSSGSQPVGSRCKLLA 945
Query: 711 VPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSI 770
+P S++ TF + D+++LIS L D+ + S+ + PS+VR+M A RACRSS+
Sbjct: 946 LPLSRETTFTLSDLEELISLLGDHHLTEARSSAPR--------PSKVRSMFAMRACRSSV 997
Query: 771 MIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
MIG AL + +M+K++ H+ +L+ PWNCPHGRPTMRHL L
Sbjct: 998 MIGKALAQKQMEKLIRHMGELDKPWNCPHGRPTMRHLSGL 1037
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 104/207 (50%), Gaps = 23/207 (11%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
+ + L YA I GV+F + K + V+ T+G+ + ++N++ +FG L P+
Sbjct: 173 KVIALLNQYACIQTGVKFSVSQQPTKGKRIVLFSTKGNPTTRENLVNIFGAKTMTVLVPL 232
Query: 140 AI-------------------CKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLP 180
+ S +V+G++S+P G GR DRQ FFVN RP LP
Sbjct: 233 DLELGFEPTSGPALKSAVKDNQVSTEVRVQGYVSRPAHGEGRQTPDRQMFFVNGRPCGLP 292
Query: 181 KVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQ 240
+ +K+ NE+YK N+ Q P + + T DVNV+PDKR + D+ +L +L+E L
Sbjct: 293 QFAKVFNEVYKAYNASQSPFIFADIQLDTHLYDVNVSPDKRTIMLHDQSRMLESLKEALA 352
Query: 241 EIYSPNNASYSVNKVEQLIEPEKSGPS 267
++ ++ Y V +Q +K+ PS
Sbjct: 353 SLFQSHD--YPVPAAQQ--STQKAQPS 375
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 53/72 (73%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
TI+PI VH+I +GQVI DL S VKELVENS+DAGA+SI++ K G + +V DNG
Sbjct: 3 TIKPIEGRTVHQIQSGQVIVDLCSVVKELVENSIDAGASSIDVRFKNQGLDSIEVQDNGS 62
Query: 71 GISPNNFKVRAV 82
GISP+N++ A+
Sbjct: 63 GISPDNYETVAL 74
>gi|119481545|ref|XP_001260801.1| DNA mismatch repair protein (Pms1), putative [Neosartorya fischeri
NRRL 181]
gi|119408955|gb|EAW18904.1| DNA mismatch repair protein (Pms1), putative [Neosartorya fischeri
NRRL 181]
Length = 1046
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 102/228 (44%), Positives = 142/228 (62%), Gaps = 17/228 (7%)
Query: 597 ALAAATTELERL---FRKEDFGRMKVIGQFNLGFII-------GKLDQ--DLFIVDQHAA 644
A A T ERL K+DF RM++IGQFNLGFI+ G D +LFI+DQHA+
Sbjct: 765 AAAMTVTAEERLSLTVTKDDFARMRIIGQFNLGFILATRSSEDGSADSKDELFIIDQHAS 824
Query: 645 DEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHA--LA 702
DEK+NFERL TV+ Q L++P +LDLT EE + + + KNGF +E D
Sbjct: 825 DEKFNFERLQAETVVQNQRLVQPKRLDLTAVEEEIVIENRTALEKNGFVVEVDDSGNEPI 884
Query: 703 GLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLA 762
G R +L ++P SK++ FGV D+++LI L++ S S+ + PS+VR M A
Sbjct: 885 GQRCKLISLPLSKEVVFGVRDLEELIVLLSEMPATSSSGSAMQTHIPR---PSKVRKMFA 941
Query: 763 SRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
RACRSSIMIG +L + +M +++ ++ ++ PWNCPHGRPTMRHL+ L
Sbjct: 942 MRACRSSIMIGKSLTQTQMVRVVRNMGTIDKPWNCPHGRPTMRHLMTL 989
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 102/193 (52%), Gaps = 15/193 (7%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAIC- 142
L AYA I+ GVRF NT GKN VV T G+ + K+NI V+G L P+ +
Sbjct: 177 LLHAYACISTGVRFSVRNTVGKNRNVVVFSTNGNQTTKENIANVYGAKTLLALIPLDLAL 236
Query: 143 --------------KSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNE 188
+ + +V+G +S+P G GR DRQ FFVN RP LP+++K NE
Sbjct: 237 EFKPSAAGRRTAEGELHTIQVKGHISRPVFGEGRQTPDRQMFFVNSRPCGLPQIAKAFNE 296
Query: 189 LYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNA 248
+YK N Q P +F + T A DVNV+PDKR + D +++ +L++ L E++ +
Sbjct: 297 VYKSFNVSQSPFVFADFHMDTNAYDVNVSPDKRTILLHDAGALIDSLKQSLTEMFEATDQ 356
Query: 249 SYSVNKVEQLIEP 261
+ +++ +P
Sbjct: 357 TVPQSQIPGYKQP 369
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/68 (60%), Positives = 49/68 (72%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
TI+ I VH+I +GQVI DL S VKELVENSLDAGATSIE+ K G + +V DNG
Sbjct: 3 TIKAIEARSVHQIQSGQVIVDLCSVVKELVENSLDAGATSIEVRFKNNGLDSIEVQDNGS 62
Query: 71 GISPNNFK 78
GISP N++
Sbjct: 63 GISPENYE 70
>gi|19115329|ref|NP_594417.1| MutL family mismatch-repair protein Pms1 [Schizosaccharomyces pombe
972h-]
gi|1709684|sp|P54280.1|PMS1_SCHPO RecName: Full=DNA mismatch repair protein pms1
gi|1246854|emb|CAA65400.1| pms1 [Schizosaccharomyces pombe]
gi|2239195|emb|CAB10113.1| MutL family mismatch-repair protein Pms1 [Schizosaccharomyces
pombe]
Length = 794
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 96/203 (47%), Positives = 131/203 (64%), Gaps = 13/203 (6%)
Query: 611 KEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKL 670
K DF RM+V+GQFN GFI+ +LFI+DQHA+DEK+N+E L + V+N Q L+ P +L
Sbjct: 605 KADFLRMRVVGQFNRGFIVVVHGNNLFIIDQHASDEKFNYEHLKSNLVINSQDLVLPKRL 664
Query: 671 DLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIST 730
DL EE V H+D+IR+ GF + D + G R L +VP SK + F D+ ++IS
Sbjct: 665 DLAATEETVLIDHIDLIRRKGFGVAIDLNQRVGNRCTLLSVPTSKNVIFDTSDLLEIISV 724
Query: 731 LADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLAD 790
L+++ ++D SR+ MLAS+ACRSS+MIG AL +EM I+ HLA+
Sbjct: 725 LSEHP---------QIDP----FSSRLERMLASKACRSSVMIGRALTISEMNTIVRHLAE 771
Query: 791 LNSPWNCPHGRPTMRHLVDLTTI 813
L+ PWNCPHGRPTMRHL+ L I
Sbjct: 772 LSKPWNCPHGRPTMRHLLRLKDI 794
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 107/197 (54%), Gaps = 10/197 (5%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
+A+ L QAYA I+ RF+ + T + K + L T + +K NI+ VFG + + L P
Sbjct: 173 KAISLLQAYATISTNKRFMVYHQTKNSGKLLQLSTNSNKDMKLNIMNVFGTKVSSSLIPW 232
Query: 140 AICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQYP 199
+ +EG++S+P GS R +RQ F+N R V+LPK+++++ E++K + Q P
Sbjct: 233 -----NDGIIEGYISRPHVGSTRASNERQMLFINRRLVNLPKIARVIQEVFKPYSMAQSP 287
Query: 200 IAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASYSVNKVEQLI 259
+N + D+NV+PDK+ VF S+E SI+ ++ LQ + + S ++ + +
Sbjct: 288 FFAINLRITNGTIDINVSPDKKSVFLSEEDSIIEFIKNSLQNLCESCGHAISCSRSQSIF 347
Query: 260 E-----PEKSGPSSGAE 271
P+ SG S+ E
Sbjct: 348 SYSSQIPDSSGDSTDQE 364
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 53/68 (77%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
T++PI+ VH+IC+GQVI D++SAVKELVENSLD+GAT+IEI K YG +VVDNG
Sbjct: 3 TVKPIDANTVHKICSGQVITDVASAVKELVENSLDSGATTIEIRFKNYGINSIEVVDNGS 62
Query: 71 GISPNNFK 78
GI +++
Sbjct: 63 GIDAGDYE 70
>gi|328793875|ref|XP_003251937.1| PREDICTED: mismatch repair endonuclease PMS2-like, partial [Apis
mellifera]
Length = 599
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 101/267 (37%), Positives = 154/267 (57%), Gaps = 23/267 (8%)
Query: 547 SIQDLRKRRQQRLSIMQSSCHTSGSVKMRRCFAAATLELSQPENEERKARALAAATTELE 606
SI ++++ Q++ +I+ ++ ++K + A NE KA EL+
Sbjct: 355 SILTIKQKLQEKQNILPKYVTSNTTIKFKAKMEA---------NENSKAE------NELK 399
Query: 607 RLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLR 666
K+ F +M++IGQFNLGFII +L +DLFI+DQHA+DEKY FE+L+ T L Q L+
Sbjct: 400 TQLTKDSFFKMEIIGQFNLGFIITRLKEDLFIIDQHASDEKYRFEKLNNETQLKTQKLII 459
Query: 667 PLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKD 726
P L+++ E + H NGF + + A G R +L +P S FG ED+++
Sbjct: 460 PKFLNISAVNETILIEHQKTFEDNGFFFKINSKAEFGHRIQLTGIPVSGYWQFGQEDIEE 519
Query: 727 LISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILE 786
LI + + E + ++ PSRVR MLASRACR ++MIG AL ++MQK++
Sbjct: 520 LIFLIREGGVENKEKNIFR--------PSRVRQMLASRACRGAVMIGKALNNSDMQKLIA 571
Query: 787 HLADLNSPWNCPHGRPTMRHLVDLTTI 813
+A + +PW+CPHGRPT+RHL+ L I
Sbjct: 572 QMAQMKNPWSCPHGRPTIRHLLSLNLI 598
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 100/195 (51%), Gaps = 15/195 (7%)
Query: 79 VRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP 138
+RA+ + +Y LI+ + CTN+ ++V+ T SS++ +NI +FG N L
Sbjct: 107 IRAIQILYSYCLISTETKITCTNSVSGKASNLVVNTVNSSNILNNINIIFGKKSSNGLIK 166
Query: 139 VAICKSDSCKVEGF---------------LSKPGQGSGRNLGDRQYFFVNDRPVDLPKVS 183
+ + D ++ + +S GR DRQ+F++N RP DL K++
Sbjct: 167 IELLPPDELTLQEYNLPNNIIVDFEWDCYISSCEHDVGRFTSDRQFFYINGRPCDLIKIN 226
Query: 184 KLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIY 243
KL+N++Y N++QYP +N + + D+NVTP+KR +F + + IL L+ L +
Sbjct: 227 KLINQIYHKYNNKQYPFIFLNLKLNKYSTDINVTPNKRTIFCTQQNLILATLKYSLISKW 286
Query: 244 SPNNASYSVNKVEQL 258
+ ++N + +L
Sbjct: 287 DKLQGNLTINPLSKL 301
>gi|380026791|ref|XP_003697126.1| PREDICTED: LOW QUALITY PROTEIN: mismatch repair endonuclease
PMS2-like [Apis florea]
Length = 689
Score = 190 bits (483), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 102/267 (38%), Positives = 156/267 (58%), Gaps = 23/267 (8%)
Query: 547 SIQDLRKRRQQRLSIMQSSCHTSGSVKMRRCFAAATLELSQPENEERKARALAAATTELE 606
SI ++++ Q++ +I+ ++ ++K + A NE KA EL+
Sbjct: 445 SILTIKQKLQEKQNILPKYVTSNTTIKFKAKMEA---------NENSKAE------NELK 489
Query: 607 RLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLR 666
K+ F +M++IGQFNLGFII +L +DLFI+DQHA+DEKY FE+L+ T L Q L+
Sbjct: 490 TQLTKDSFFKMEIIGQFNLGFIITRLKEDLFIIDQHASDEKYRFEKLNNETQLKTQKLII 549
Query: 667 PLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKD 726
P L+++ E + + NGF L + A +G R +L +P S FG ED+++
Sbjct: 550 PKFLNISAVNETILIENQKTFEDNGFFLNINILAESGHRVQLTGIPVSGYWQFGQEDIEE 609
Query: 727 LISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILE 786
LI + ++ E S ++ PSRVR MLASRACR ++MIG AL ++MQK++
Sbjct: 610 LIFLIRESGIENXEKSIFR--------PSRVRQMLASRACRGAVMIGKALNNSDMQKLIT 661
Query: 787 HLADLNSPWNCPHGRPTMRHLVDLTTI 813
+A + +PW+CPHGRPT+RHL+ L I
Sbjct: 662 QMAQMKNPWSCPHGRPTIRHLLSLNLI 688
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 117/246 (47%), Gaps = 19/246 (7%)
Query: 79 VRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP 138
+RA+ + +Y LI+ + CTN+ ++V+ T SS++ +NI +FG N L
Sbjct: 181 IRAIQILYSYCLISTETKITCTNSVSGKTSNLVVNTVNSSNILNNINIIFGKKSSNGLIK 240
Query: 139 VAICKSDSCKVEGF---------------LSKPGQGSGRNLGDRQYFFVNDRPVDLPKVS 183
+ + D ++ + +S GR DRQ+F++N RP DL K+
Sbjct: 241 IELLSPDELTLQEYNLPNSIIVDFEWDCYISSCEHDVGRFTSDRQFFYINGRPCDLIKIG 300
Query: 184 KLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIY 243
KL+N++Y N++QYP +N + + D+NVTP+KR +F + E IL L+ L +
Sbjct: 301 KLINQIYHKYNNKQYPFIFLNLKLNKYSTDINVTPNKRTIFCTQENLILATLKYSLTSKW 360
Query: 244 SPNNASYSVNKVEQLIEPEKS--GPSSGAESCMFLEQLSPDGNGCIEILNEQQISKGNTP 301
+ +VN + +L K P++ S L +L+ N I Q I N
Sbjct: 361 DKLQGNLTVNPLSKLNFGIKRTISPTNEDRSIKRLHKLNEISNTKYTI--RQNIQSDNEN 418
Query: 302 KTVEVD 307
K +E D
Sbjct: 419 KIIEYD 424
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 52/76 (68%)
Query: 3 VETPTNSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEW 62
+ T S I I+K +H+IC+GQV+ DL++A+KELVENSLD+ AT I+I L +YG+
Sbjct: 5 IATSEKSKKINVISKQTIHQICSGQVVLDLATALKELVENSLDSNATLIDIKLTDYGKTC 64
Query: 63 FQVVDNGCGISPNNFK 78
V DNG G+ +F+
Sbjct: 65 ITVSDNGSGVLEQDFE 80
>gi|449541720|gb|EMD32702.1| hypothetical protein CERSUDRAFT_161174 [Ceriporiopsis subvermispora
B]
Length = 1089
Score = 190 bits (482), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 106/265 (40%), Positives = 147/265 (55%), Gaps = 46/265 (17%)
Query: 576 RCFAAATLELSQPENEERKARALAAATTELERLFRKEDFGRMKVIGQFNLGFIIGK---- 631
R A +S E++ER AL+ R+ K DF M+VIGQFNLGFI+ +
Sbjct: 826 RPLVEADAGVSNAEDDERAVEALS-------RVIDKSDFASMEVIGQFNLGFIVARRRKS 878
Query: 632 --------------------LDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLD 671
LD DLFI+DQHAADEKYNFE L QST + Q L RP L+
Sbjct: 879 VMDDCPRSADRGGNAANEPILD-DLFIIDQHAADEKYNFETLQQSTKIESQKLFRPQALE 937
Query: 672 LTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLK--AVPFSKKITFGVEDVKDLIS 729
LT +E++A+ ++D++R+NGF +E D +A G +LK A P SK F ++D+++L+
Sbjct: 938 LTASDELLATENIDVLRQNGFEVEIDENAAPGQGSKLKLLAQPISKNTVFDMKDLEELLH 997
Query: 730 TLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLA 789
+ D T V S+ RAM A RACR S M+G L R++M ++ H+
Sbjct: 998 LMHDRP------------TGHMVRCSKARAMFAMRACRKSYMVGTPLNRHQMTSVVRHMG 1045
Query: 790 DLNSPWNCPHGRPTMRHLVDLTTIR 814
++ PW+CPHGRPTMRHL D+ R
Sbjct: 1046 FMDQPWHCPHGRPTMRHLFDMIGAR 1070
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 105/200 (52%), Gaps = 27/200 (13%)
Query: 80 RAVFLCQAYALIA-----KGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNI-- 132
+A+ L AYAL+ GVR TN ++V L+T G +S + ++ T++G
Sbjct: 191 KALVLLSAYALVPCAQENHGVRLSVTNQPAGGRRTVQLRTDGQASTRASVSTLWGPRALE 250
Query: 133 --------YNCLEPVAICK------------SDSCKVEGFLSKPGQGSGRNLGDRQYFFV 172
+ L A+ + ++ +V G +SK G GR DRQ+FFV
Sbjct: 251 NLVDLDVRFRVLPERAVLRRRGVLDGDDDTHANEVRVRGLVSKFAVGCGRAGTDRQFFFV 310
Query: 173 NDRPVDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSIL 232
N RP + KV K NE+Y+ N+ Q P + +FI+PT +CD+NV+PDKR + E +++
Sbjct: 311 NGRPCNPSKVQKAFNEVYRSFNATQAPFVVADFILPTDSCDINVSPDKRTILLHSEANLV 370
Query: 233 HALREGLQEIYSPNNASYSV 252
AL+ L+E ++P A+Y V
Sbjct: 371 QALKTALEETFAPARATYDV 390
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 54/71 (76%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ ++ VHRI +GQV+ DL + VKEL+ENSLDAGAT+IE+ K+YG + F+V+DNG G
Sbjct: 20 IKALDGTSVHRISSGQVVVDLQTGVKELLENSLDAGATNIEVRFKDYGLQSFEVIDNGSG 79
Query: 72 ISPNNFKVRAV 82
I+P ++ A+
Sbjct: 80 ITPEDYDAIAL 90
>gi|224012369|ref|XP_002294837.1| hypothetical protein THAPSDRAFT_264783 [Thalassiosira pseudonana
CCMP1335]
gi|220969276|gb|EED87617.1| hypothetical protein THAPSDRAFT_264783 [Thalassiosira pseudonana
CCMP1335]
Length = 919
Score = 189 bits (481), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 97/206 (47%), Positives = 126/206 (61%), Gaps = 4/206 (1%)
Query: 611 KEDFGRMKVIGQFNLGFIIGKL-DQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLK 669
KEDF RM +IGQFNLGFI+ + D +LFI+DQHA DEKYNFERL + TV+++Q L+ PL
Sbjct: 705 KEDFLRMSIIGQFNLGFILARTPDHNLFILDQHACDEKYNFERLFKETVIHEQKLIAPLP 764
Query: 670 LDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIS 729
L+L+P EE HM++ +NGF DP R L A+P S + FG EDV L +
Sbjct: 765 LELSPSEEHCVLDHMEVFERNGFRFSYDPDKEPRHRLSLTALPHSGSVQFGKEDVGALCA 824
Query: 730 TLADNQGECSIISSYK--MDTADSVCPSRVR-AMLASRACRSSIMIGDALGRNEMQKILE 786
L + + S + + + D + S + AM ASRACR SIMIG AL E IL+
Sbjct: 825 MLGADGTYAGMAGSQEGSIKSVDGILGSSIAIAMFASRACRGSIMIGTALSHKEQMNILK 884
Query: 787 HLADLNSPWNCPHGRPTMRHLVDLTT 812
L + PWNC HGRPTM H+ +L T
Sbjct: 885 KLDKTDIPWNCAHGRPTMSHIRNLKT 910
Score = 102 bits (255), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 107/193 (55%), Gaps = 17/193 (8%)
Query: 78 KVRAVFLCQAYALIAKGVRFVCTNTTGKNVKS-----VVLKT-QGSSSLKDNIITVFGMN 131
+++ + + Q YA++ G +F T+ N KS V L T + S++L+ +V G
Sbjct: 182 RMKLLRVLQGYAILCLGTQFNLTDVNAPNSKSKCKSDVRLATSESSNTLEQRTASVLGTK 241
Query: 132 IYNCLEPVAI--CKSDSCKVEGFLS----KPGQGSGRNLGDRQYFFVNDRPVDLPKVSKL 185
+ L + I + K+EG +S P + R+L Q+F +N RPVDLP VS++
Sbjct: 242 FLSGLTRIEINLHSATRWKMEGLVSHAPTSPHSATARDL---QFFSINGRPVDLPTVSRV 298
Query: 186 VNELYK-GANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYS 244
+ ++++ G+ R+ P ++ F +P DVN++PDKR+V F++E SI +REGL +++S
Sbjct: 299 LGDVWRLGSGGRRRPACVLAFTLPNNMYDVNLSPDKREVLFTEEASISELIREGLTKLWS 358
Query: 245 -PNNASYSVNKVE 256
+ + N VE
Sbjct: 359 GESEGKFEANAVE 371
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 44/63 (69%)
Query: 10 PTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNG 69
PTI+PI+ + +I AGQ I DLSSAVKELV+N++DA AT + + L G E QV DNG
Sbjct: 1 PTIKPISSTAIQQIVAGQAITDLSSAVKELVDNAIDAKATRVCVKLYNQGLESIQVSDNG 60
Query: 70 CGI 72
G+
Sbjct: 61 TGV 63
>gi|367002666|ref|XP_003686067.1| hypothetical protein TPHA_0F01490 [Tetrapisispora phaffii CBS 4417]
gi|357524367|emb|CCE63633.1| hypothetical protein TPHA_0F01490 [Tetrapisispora phaffii CBS 4417]
Length = 901
Score = 189 bits (480), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 93/214 (43%), Positives = 134/214 (62%), Gaps = 14/214 (6%)
Query: 610 RKEDFGRMKVIGQFNLGFIIGKLDQD----LFIVDQHAADEKYNFERLSQSTVLNQQPLL 665
+K+ F M ++GQFNLGFII + D LFIVDQHA+DEKYNFE L ++TV Q L+
Sbjct: 695 KKKQFNNMNLVGQFNLGFIITTCNIDGKSNLFIVDQHASDEKYNFETLQKNTVFKSQKLI 754
Query: 666 RPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVK 725
L ++L+ +E+V +++I KNGF LE D G + RL ++P SK+ F +ED
Sbjct: 755 SSLPVELSVVDELVVMENIEIFEKNGFKLEVDDDGNQGCKIRLTSLPVSKRTLFNIEDFN 814
Query: 726 DLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKIL 785
+L+ + N G +S+ S++R+M A RACRSSIMIG L R M +++
Sbjct: 815 ELVQLVKVNDGM----------NKESIKCSKIRSMFAMRACRSSIMIGKPLNRKVMSRVV 864
Query: 786 EHLADLNSPWNCPHGRPTMRHLVDLTTIRKNIDE 819
++L+ L+ PWNCPHGRPTMRHL++L +D+
Sbjct: 865 KNLSTLDKPWNCPHGRPTMRHLMELKNWDSYMDD 898
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 91/186 (48%), Gaps = 22/186 (11%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
+ + L Q+YA+I ++F N T + V T + ++ NI++VFG + L V
Sbjct: 171 KCITLLQSYAIINTNIKFSVVNITPSGKRQRVFSTLSNKGMQKNILSVFGSTNLHGLAEV 230
Query: 140 AIC------KSDSCK----------------VEGFLSKPGQGSGRNLGDRQYFFVNDRPV 177
KS K VEG LSK GSGRN DRQ+ ++N RP+
Sbjct: 231 KFTLDLNPYKSHFSKRYDEDDTFDDLNYTITVEGLLSKSSFGSGRNNKDRQFVYINKRPI 290
Query: 178 DLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALRE 237
+ P + K NE Y+ N+ QYP +NFIV D+NVTPDKR V +E ++ +E
Sbjct: 291 EYPTLVKSCNETYRQFNNVQYPAFFLNFIVSPELIDLNVTPDKRTVILHNERYVIDLFKE 350
Query: 238 GLQEIY 243
L + +
Sbjct: 351 ELLKYF 356
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 47/67 (70%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I I+ VH + +GQVI D+S+ VKELV+NS+DA A+ I+I K+YG + + D+G G
Sbjct: 4 INAIDVKDVHILTSGQVIIDISTTVKELVDNSIDANASQIDIIFKKYGIDSVECSDDGNG 63
Query: 72 ISPNNFK 78
I P+++K
Sbjct: 64 IQPDDYK 70
>gi|425767820|gb|EKV06374.1| DNA mismatch repair protein (Pms1), putative [Penicillium digitatum
Pd1]
gi|425769616|gb|EKV08106.1| DNA mismatch repair protein (Pms1), putative [Penicillium digitatum
PHI26]
Length = 1000
Score = 189 bits (480), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 97/206 (47%), Positives = 137/206 (66%), Gaps = 14/206 (6%)
Query: 611 KEDFGRMKVIGQFNLGFII----GKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLR 666
K DF M++IGQFNLGFII G+ +LFI+DQHA+DEK+NFERL TV+ Q L+R
Sbjct: 767 KTDFAHMRIIGQFNLGFIIAVRPGEDRDELFIIDQHASDEKFNFERLQAETVVQNQRLVR 826
Query: 667 PLKLDLTPEEEVVASMHMDIIRKNGF--SLEEDPHALAGLRFRLKAVPFSKKITFGVEDV 724
P +LDLT EE V + + KNGF +++E G R +L ++P SK++ FGV D+
Sbjct: 827 PQRLDLTAVEEEVVLENRAALEKNGFLVTVDESGDEPIGRRCQLVSLPLSKEVVFGVRDL 886
Query: 725 KDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKI 784
++LI L++ S+ +S + A PS+VR M A RACRSSIMIG L +M+++
Sbjct: 887 EELIVLLSE-----SLSTS---NGASIPRPSKVRKMFAMRACRSSIMIGKTLTSRQMERV 938
Query: 785 LEHLADLNSPWNCPHGRPTMRHLVDL 810
++++ ++ PWNCPHGRPTMRHL+ L
Sbjct: 939 VQNMGTIDKPWNCPHGRPTMRHLMSL 964
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 89/175 (50%), Gaps = 15/175 (8%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCL------- 136
L AYA I+ GVRF NT GK VV T G+ + K+NI V+G + L
Sbjct: 179 LLHAYACISTGVRFSVRNTVGKTRNVVVFSTNGNKTTKENIANVYGAKTISALISLDLEL 238
Query: 137 --EPVAICKS------DSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNE 188
+P K +V G +S+P G GR DRQ FFVN RP LP++ K NE
Sbjct: 239 EFQPATATKRAGDDQLSKIQVRGHISRPVFGEGRQTPDRQMFFVNSRPCGLPQIQKAFNE 298
Query: 189 LYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIY 243
+YK N Q +F + T A DVNV+PDKR++ D +++ L+ L +++
Sbjct: 299 IYKSFNVSQSAFIFADFQMDTNAYDVNVSPDKRQILLHDAGAMIDTLKISLTQLF 353
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 48/68 (70%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
TI+ I VH+I +GQVI DL S KELVENSLDAGAT+IE+ K G + +V DNG
Sbjct: 5 TIQAIEARSVHQIQSGQVIVDLCSVAKELVENSLDAGATTIEVRFKNNGLDLIEVQDNGS 64
Query: 71 GISPNNFK 78
GISP N++
Sbjct: 65 GISPENYE 72
>gi|50291023|ref|XP_447944.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527255|emb|CAG60895.1| unnamed protein product [Candida glabrata]
Length = 907
Score = 189 bits (479), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 89/205 (43%), Positives = 135/205 (65%), Gaps = 14/205 (6%)
Query: 610 RKEDFGRMKVIGQFNLGFIIGKLDQ----DLFIVDQHAADEKYNFERLSQSTVLNQQPLL 665
+K DF MKV+GQFNLGFI+ + DLFIVDQHA+DEK+NFE L Q+T Q L+
Sbjct: 701 KKSDFKDMKVVGQFNLGFILVTRNMGSNYDLFIVDQHASDEKFNFENLQQTTRFKSQKLI 760
Query: 666 RPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVK 725
P ++L+ +E++ ++ + +NGF +E D A+AG + +L ++P SK+ FGV D +
Sbjct: 761 SPETIELSVIDELIVMDNLSVFERNGFKIEIDEDAMAGHKVKLISIPVSKRTIFGVADFQ 820
Query: 726 DLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKIL 785
+L+ + ++ G + ++ C S++RAM A RACRSSIM+G L M +++
Sbjct: 821 ELVYLIKEDGG---------TNKSNIKC-SKIRAMFAMRACRSSIMVGKPLNMRTMTRVV 870
Query: 786 EHLADLNSPWNCPHGRPTMRHLVDL 810
++L+ L+ PWNCPHGRPTMRHL++L
Sbjct: 871 QNLSTLDKPWNCPHGRPTMRHLMEL 895
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 92/187 (49%), Gaps = 22/187 (11%)
Query: 79 VRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP 138
+ + L Q+YA+I + VR TN T K+ +L T + +L II++FG L P
Sbjct: 170 TKCITLLQSYAIINESVRITVTNITSTGKKNNILSTAANQNLNKRIISIFGSTSLRGLSP 229
Query: 139 VAIC----------------------KSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRP 176
+++ KV G S+ G GR DRQ+ F+N RP
Sbjct: 230 ISLTLDMNPFKKNIKSRYVDDPDFDNMDYKVKVTGLFSQNSFGCGRTSKDRQFIFMNKRP 289
Query: 177 VDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALR 236
+D P V K NE+Y+ N+ QYP+ I+NF + DVN+TPDKR V +E S++ L
Sbjct: 290 IDYPAVVKCCNEVYRTYNNVQYPMFILNFELTPDLIDVNITPDKRTVVLHNEQSVIDVLY 349
Query: 237 EGLQEIY 243
E L + +
Sbjct: 350 ENLSDYF 356
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 53/71 (74%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I I++ VHRI +GQVI DL+SAVKELVENSLDA AT I+I ++YG + +V DNG G
Sbjct: 3 ISQISEQDVHRITSGQVIIDLASAVKELVENSLDAQATQIDITFRKYGIDGLEVSDNGTG 62
Query: 72 ISPNNFKVRAV 82
IS ++++ A+
Sbjct: 63 ISKDDYESLAL 73
>gi|451849193|gb|EMD62497.1| hypothetical protein COCSADRAFT_38419 [Cochliobolus sativus ND90Pr]
Length = 1058
Score = 189 bits (479), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 97/211 (45%), Positives = 134/211 (63%), Gaps = 15/211 (7%)
Query: 611 KEDFGRMKVIGQFNLGFIIG-------KLDQDLFIVDQHAADEKYNFERLSQSTVLNQQP 663
K DFG+M++IGQFNLGFII + LFI+DQHA+DEKYNFERLS +T L Q
Sbjct: 819 KADFGKMRIIGQFNLGFIIAVRPPTSTSPNSHLFIIDQHASDEKYNFERLSATTKLVSQR 878
Query: 664 LLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHA----LAGLRFRLKAVPFSKKITF 719
L+ P L+LT EE + + + NGF +E +P + G R L ++P SK++TF
Sbjct: 879 LVHPHPLELTAVEEEIILANQPTLTANGFVVELNPTSDTEPRPGTRASLTSLPMSKEVTF 938
Query: 720 GVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRN 779
D+++L+S + DN S +A + PS+VR +LASRACRSS+MIG L
Sbjct: 939 TPSDLEELLSLILDNPPSSS----TSSSSAYILRPSKVRKLLASRACRSSVMIGKTLKTQ 994
Query: 780 EMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
M++I+ H+ ++ PW+CPHGRPTMRHL+DL
Sbjct: 995 RMREIVRHMGGMDKPWSCPHGRPTMRHLLDL 1025
Score = 119 bits (297), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 93/184 (50%), Gaps = 24/184 (13%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAI-- 141
L AYA I+ GV+F +N K K+V T ++S +DNI V+G L P+ +
Sbjct: 177 LLNAYACISVGVKFSVSNQIPKGKKTVAFATNANASTRDNISNVYGAKTVTALIPLNLEF 236
Query: 142 ----------------------CKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDL 179
S + K+ G +S+P G GR D+Q FFVN RP +L
Sbjct: 237 IMDPSNRPGATQNIKVPDAHNDIASRTVKIVGHISRPVVGEGRQTPDKQMFFVNSRPCNL 296
Query: 180 PKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGL 239
P+VSK NE+YK N+ Q P + + T A DVNV+PDKR + D+ +L +++ L
Sbjct: 297 PQVSKAFNEVYKSYNTTQSPFVFADIKLDTNAYDVNVSPDKRTIMLHDQAVLLENIKDSL 356
Query: 240 QEIY 243
E++
Sbjct: 357 LELF 360
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 51/72 (70%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
TI+ I VH+I +GQVI DL S KELVENS+DAGAT+IE+ K YG + +V DNG
Sbjct: 3 TIKAIESRSVHQIQSGQVIVDLQSVCKELVENSIDAGATAIEVRFKNYGLDTIEVQDNGS 62
Query: 71 GISPNNFKVRAV 82
GISP +++ A+
Sbjct: 63 GISPQDYQTIAL 74
>gi|346325063|gb|EGX94660.1| DNA mismatch repair protein PMS1 [Cordyceps militaris CM01]
Length = 992
Score = 188 bits (478), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 103/237 (43%), Positives = 136/237 (57%), Gaps = 29/237 (12%)
Query: 601 ATTELERLFRKEDFGRMKVIGQFNLGFII--------------GKLDQDLFIVDQHAADE 646
A + L+ + K DFG+M+V GQFNLGFII G + +LFI+DQHA+DE
Sbjct: 748 AESRLQLIISKGDFGKMRVAGQFNLGFIIAVRPRTSQSPTTGDGASNDELFIIDQHASDE 807
Query: 647 KYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPH--ALAGL 704
KYNFERL STV+ Q L+ P LDLT EE + + I NGF + D A G
Sbjct: 808 KYNFERLQSSTVVQSQRLVHPKTLDLTALEEEIVMENQAAIEANGFQILVDTSGDAPVGG 867
Query: 705 RFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASR 764
R L A+P S++ F +ED+++LI+ L D G A P++VR M A R
Sbjct: 868 RCTLTALPLSRETAFSLEDLEELIAILGDTPGGGD---------AQIPRPAKVRKMFAMR 918
Query: 765 ACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKNIDENG 821
ACRSS+MIG L +M ++ H+ +L+ PWNCPHGRPTMRHL L + DE+G
Sbjct: 919 ACRSSVMIGKPLTLRQMYGLVRHMGELDKPWNCPHGRPTMRHLCRL----QAWDEHG 971
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 94/191 (49%), Gaps = 18/191 (9%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
+ + L YA I ++F + K + ++ T+G+ + KDNII +FG L +
Sbjct: 173 KVIALLNQYACILTQLKFSVSQQPTKGKRILLFSTKGNQTTKDNIINIFGAKTMTALVAL 232
Query: 140 AI---------------CKSDSCK---VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPK 181
+ ++++ K V G +S+P G GR DRQ FFVN RP LP+
Sbjct: 233 DLKLEIVPTTSTLHLTSTEAEASKQVCVLGHVSRPVHGEGRQTPDRQMFFVNGRPCGLPQ 292
Query: 182 VSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQE 241
+K NE+YK N Q P + + T DVNV+PDKR + D+ +L +LR L E
Sbjct: 293 FAKTFNEIYKSYNYSQSPFIFADIRLDTNMYDVNVSPDKRSILLHDQNHLLESLRSALVE 352
Query: 242 IYSPNNASYSV 252
++ ++ + V
Sbjct: 353 LFDQHDYTVPV 363
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 52/72 (72%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
TI+ I+ +H+I +GQVI DL S VKELVENS+DAGAT++++ K G + ++ DNG
Sbjct: 3 TIKQIDGRSIHQIQSGQVIVDLCSVVKELVENSVDAGATTLDVRFKNQGLDSIEIQDNGS 62
Query: 71 GISPNNFKVRAV 82
GISP N++ A+
Sbjct: 63 GISPANYESVAL 74
>gi|406864738|gb|EKD17782.1| DNA mismatch repair protein MutL [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 1135
Score = 188 bits (478), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 99/237 (41%), Positives = 139/237 (58%), Gaps = 26/237 (10%)
Query: 590 NEERKARALAAATTE--LERLFRKEDFGRMKVIGQFNLGFIIGK------------LDQD 635
E+ K AL +A E L + K DF +MK++GQFNLGFI+ D
Sbjct: 828 TEKAKDEALDSAQAEEKLSLIISKSDFAKMKIVGQFNLGFILATRASGSKCEDGVMTADD 887
Query: 636 LFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGF--S 693
+FI+DQHA+DEKYNFERL +T++ Q L+ P LDLT EE + ++ + NGF +
Sbjct: 888 MFIIDQHASDEKYNFERLYATTIVQSQRLVYPKTLDLTALEEEIVMENLSALETNGFIIT 947
Query: 694 LEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVC 753
++E + G R +L ++P S++ F + D+++LI+ LA+ Y T
Sbjct: 948 VDETGESPVGKRCQLTSLPISRETAFSLTDLEELIALLAE----------YSPGTGPVPR 997
Query: 754 PSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
PS++R M A RACRSSIMIG L +M K++ HL +L+ PWNCPHGRPTMRHL L
Sbjct: 998 PSKMRKMFAMRACRSSIMIGKTLTGRQMGKVVRHLGELDKPWNCPHGRPTMRHLCAL 1054
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 97/196 (49%), Gaps = 19/196 (9%)
Query: 79 VRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP 138
R + + YA I G++F + GK K+ + T+G+ S ++NI+ VFG L P
Sbjct: 172 TRVMGVLGQYACIQTGIKFSVSQQAGKGKKTTLFSTKGNQSTRENIVNVFGAKTLTALIP 231
Query: 139 VAI-------------------CKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDL 179
+ + + ++ G +S+P G GR DRQ FFVN RP L
Sbjct: 232 LDLNLELDATSAPSQKWSTQDDGDTKKIRITGHVSRPASGEGRQTPDRQMFFVNARPCGL 291
Query: 180 PKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGL 239
P+V+K NE+YK N Q P N + T DVNV+PDKR + D+ +L L+E L
Sbjct: 292 PQVAKAFNEVYKAYNGTQSPFIFANIELDTHLYDVNVSPDKRTILLHDQNRMLENLKEEL 351
Query: 240 QEIYSPNNASYSVNKV 255
+++ + + ++++
Sbjct: 352 TKLFESQDYTVPISQL 367
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 52/72 (72%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
TI+ I VH+I +GQVI DL S VKELVENSLDAGATSI++ + G + +V DNG
Sbjct: 3 TIKAIEGKTVHQIQSGQVIVDLCSVVKELVENSLDAGATSIDVRFRNQGLDSIEVQDNGD 62
Query: 71 GISPNNFKVRAV 82
GISP+N++ A+
Sbjct: 63 GISPHNYETLAL 74
>gi|452001350|gb|EMD93810.1| hypothetical protein COCHEDRAFT_1171976 [Cochliobolus
heterostrophus C5]
Length = 1017
Score = 188 bits (478), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 98/211 (46%), Positives = 135/211 (63%), Gaps = 15/211 (7%)
Query: 611 KEDFGRMKVIGQFNLGFIIG-------KLDQDLFIVDQHAADEKYNFERLSQSTVLNQQP 663
K DFG+M++IGQFNLGFII + LFI+DQHA+DEKYNFERLS +T L Q
Sbjct: 779 KADFGKMRIIGQFNLGFIIAVRPPTSTSPNSHLFIIDQHASDEKYNFERLSATTKLVSQR 838
Query: 664 LLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHA----LAGLRFRLKAVPFSKKITF 719
L+ P L+LT EE + + + NGF +E +P + G R L ++P SK++TF
Sbjct: 839 LVHPHPLELTAVEEEIILANQPTLAANGFVVELNPTSETEPRPGTRASLTSLPMSKEVTF 898
Query: 720 GVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRN 779
D+++L+S + DN SS +A + PS+VR +LASRACRSS+MIG L
Sbjct: 899 TPSDLEELLSLILDNPPS----SSTSSSSAYILRPSKVRKLLASRACRSSVMIGKTLKTQ 954
Query: 780 EMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
M++I+ H+ ++ PW+CPHGRPTMRHL+DL
Sbjct: 955 RMREIVRHMGGMDKPWSCPHGRPTMRHLLDL 985
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 95/188 (50%), Gaps = 24/188 (12%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
+ + L AYA I+ GV+F +N K K+V T ++S +DNI VFG L P+
Sbjct: 173 KVLHLLNAYACISVGVKFSVSNQIPKGSKTVAFATNANTSTRDNISNVFGAKTVTALIPL 232
Query: 140 AI------------------------CKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDR 175
+ +S + ++ G +S+P G GR D+Q FFVN R
Sbjct: 233 NLKFIMDPSNRPGATQSIKAPDAHDDIESRTVRIVGHISRPVVGEGRQTPDKQMFFVNSR 292
Query: 176 PVDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHAL 235
P +LP+VSK NE+YK N Q P + + T A DVNV+PDKR + D+ +L +
Sbjct: 293 PCNLPQVSKAFNEVYKSYNITQSPFIFADIKLDTNAYDVNVSPDKRTIMLHDQAVLLENI 352
Query: 236 REGLQEIY 243
++ L E++
Sbjct: 353 KDSLLELF 360
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 51/72 (70%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
TI+ I VH+I +GQVI DL S KELVENS+DAGAT+IE+ K YG + +V DNG
Sbjct: 3 TIKAIESRSVHQIQSGQVIVDLQSVCKELVENSIDAGATAIEVRFKNYGLDTIEVQDNGS 62
Query: 71 GISPNNFKVRAV 82
GISP +++ A+
Sbjct: 63 GISPEDYQTIAL 74
>gi|374108502|gb|AEY97409.1| FAER421Wp [Ashbya gossypii FDAG1]
Length = 903
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 93/204 (45%), Positives = 131/204 (64%), Gaps = 14/204 (6%)
Query: 611 KEDFGRMKVIGQFNLGFII----GKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLR 666
K DF M +IGQFNLGFII + DLFIVDQHA+DEKYNFE L +STV N Q L++
Sbjct: 698 KRDFKEMSIIGQFNLGFIIVARRAENKHDLFIVDQHASDEKYNFENLQKSTVFNSQHLIK 757
Query: 667 PLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKD 726
PL ++L+ +E++ ++ + +KNGF + + G R L +P SK+ F +ED +
Sbjct: 758 PLTVELSVIDELLVLENLPLFKKNGFKIRVNEAQKQGSRIELTGMPTSKQTIFDIEDFYE 817
Query: 727 LISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILE 786
L+S L EC ++ +S+ S++R+M A RACR SIMIG L R M +++
Sbjct: 818 LLSLLK----ECDGVNK------NSIACSKIRSMFAMRACRMSIMIGKPLTRRTMTEVVR 867
Query: 787 HLADLNSPWNCPHGRPTMRHLVDL 810
L++L+ PWNCPHGRPTMRHL++L
Sbjct: 868 KLSELDKPWNCPHGRPTMRHLMEL 891
Score = 115 bits (289), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 100/189 (52%), Gaps = 25/189 (13%)
Query: 76 NFKV---RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNI 132
NFK + V L Q+YAL+++ R N KS++L T G + + NI+TVFG +
Sbjct: 165 NFKKQFGKCVTLLQSYALLSENCRLSIFNVNAAGSKSLLLSTPGRNDISKNILTVFGSDG 224
Query: 133 YNCLEPVAI--------------CKSDSC--------KVEGFLSKPGQGSGRNLGDRQYF 170
+ L+ V + DS V G++S+ G GR+ DRQ+
Sbjct: 225 MHGLQKVGLHLDLNEYKEKMLKKYSEDSTLDDADHRIAVTGYISRASFGCGRSGKDRQFI 284
Query: 171 FVNDRPVDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECS 230
++N RPVD P+V K N++Y+ N+ QYP+ I+NF + + DVNVTPDKR V +E
Sbjct: 285 YINKRPVDYPQVLKCCNDIYRSFNNVQYPVIILNFELSPQFVDVNVTPDKRTVLLHNEEY 344
Query: 231 ILHALREGL 239
+L +L E L
Sbjct: 345 VLQSLAEKL 353
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 47/71 (66%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I IN+ VHRI +GQVI DL +AVKE+VENSLDA A +EI + YG E + DNG G
Sbjct: 5 INAINQADVHRITSGQVIIDLVAAVKEVVENSLDAHADKLEITFRNYGLEAIECADNGDG 64
Query: 72 ISPNNFKVRAV 82
I +NF A+
Sbjct: 65 IPDSNFDSLAL 75
>gi|388581303|gb|EIM21612.1| hypothetical protein WALSEDRAFT_38196 [Wallemia sebi CBS 633.66]
Length = 861
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 101/266 (37%), Positives = 158/266 (59%), Gaps = 27/266 (10%)
Query: 559 LSIMQSSCHTSGSVKMRRCFAAATLELSQPENEERKA-----RALAAATTELERLFRKED 613
++I + S H +V+ R+ + T++ + P N A +A L R+ K D
Sbjct: 591 VNIDEISLHWQINVEERQSRRSNTVQKTTPNNLLDNAGIQNVDDAQSAENALSRVLHKND 650
Query: 614 FGRMKVIGQFNLGFII---------GKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPL 664
F R++V+GQFNLGF+I G ++DLFIVDQHAADEKYNFE L + + Q L
Sbjct: 651 FERLQVLGQFNLGFMIVRRLETNTQGIEEEDLFIVDQHAADEKYNFENLQLNHKIQSQKL 710
Query: 665 LRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDV 724
+ P LDL+ +E+V ++DI++ NGF ++ + A +G R +L ++P SK F ++D+
Sbjct: 711 IIPRTLDLSASDELVVFDNLDILKSNGFDIQINEDATSGNRCQLVSLPLSKSTVFDLKDL 770
Query: 725 KDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKI 784
++LI + ++ G+ V ++ R + ASRACR S+M+G +L +M KI
Sbjct: 771 EELIHFINESPGKL-------------VRCTKARDLFASRACRMSVMVGKSLKLKQMTKI 817
Query: 785 LEHLADLNSPWNCPHGRPTMRHLVDL 810
+ +L+ LN PWNCPHGRPT+RHL++L
Sbjct: 818 VRNLSTLNQPWNCPHGRPTLRHLINL 843
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 113/197 (57%), Gaps = 20/197 (10%)
Query: 80 RAVFLCQAYAL--IAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLE 137
+A+ L Q+YAL + +F+ TNT N KS++ ++ G S L +NI ++FG N L
Sbjct: 174 KAINLLQSYALCPLLADKKFIVTNTNKSNKKSLIFQSTGKS-LLNNITSIFGSNTKQDLV 232
Query: 138 PVAI---CKSDS--------------CKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLP 180
P+ + K DS +++G ++KP G GR+ DRQYF++N RP ++P
Sbjct: 233 PLDLDLPVKIDSNIAKRENVDELEFTVQLQGTITKPLLGLGRSTSDRQYFYINGRPCNMP 292
Query: 181 KVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQ 240
K +K +N+++K N + YP+ I +F VP DVN+TPDKR +F E S+L +L++ L
Sbjct: 293 KAAKAINQVFKSYNIQSYPLVIADFKVPMDTYDVNITPDKRTIFLHFESSLLESLKDRLD 352
Query: 241 EIYSPNNASYSVNKVEQ 257
Y P ++VNK Q
Sbjct: 353 SFYEPFRGVFNVNKATQ 369
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 46/67 (68%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
+I I+ +++ +GQVI DL A+KEL+ENSLDA +T IEI L +G + +VVDNG
Sbjct: 2 SINEIDNSTKNKLQSGQVILDLQGAIKELIENSLDASSTVIEINLFNFGLDTIKVVDNGN 61
Query: 71 GISPNNF 77
GI N+F
Sbjct: 62 GIDLNDF 68
>gi|45191022|ref|NP_985276.1| AER421Wp [Ashbya gossypii ATCC 10895]
gi|44984090|gb|AAS53100.1| AER421Wp [Ashbya gossypii ATCC 10895]
Length = 903
Score = 188 bits (477), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 93/204 (45%), Positives = 131/204 (64%), Gaps = 14/204 (6%)
Query: 611 KEDFGRMKVIGQFNLGFII----GKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLR 666
K DF M +IGQFNLGFII + DLFIVDQHA+DEKYNFE L +STV N Q L++
Sbjct: 698 KRDFKEMSIIGQFNLGFIIVARRAENKHDLFIVDQHASDEKYNFENLQKSTVFNSQHLIK 757
Query: 667 PLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKD 726
PL ++L+ +E++ ++ + +KNGF + + G R L +P SK+ F +ED +
Sbjct: 758 PLTVELSVIDELLVLENLPLFKKNGFKIRVNEAQKQGSRIELTGMPTSKQTIFDIEDFYE 817
Query: 727 LISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILE 786
L+S L EC ++ +S+ S++R+M A RACR SIMIG L R M +++
Sbjct: 818 LLSLLK----ECDGVNK------NSIACSKIRSMFAMRACRMSIMIGKPLTRRTMTEVVR 867
Query: 787 HLADLNSPWNCPHGRPTMRHLVDL 810
L++L+ PWNCPHGRPTMRHL++L
Sbjct: 868 KLSELDKPWNCPHGRPTMRHLMEL 891
Score = 115 bits (289), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 67/189 (35%), Positives = 100/189 (52%), Gaps = 25/189 (13%)
Query: 76 NFKV---RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNI 132
NFK + V L Q+YAL+++ R N KS++L T G + + NI+TVFG +
Sbjct: 165 NFKKQFGKCVTLLQSYALLSENCRLSIFNVNAAGSKSLLLSTPGRNDISKNILTVFGSDG 224
Query: 133 YNCLEPVAI--------------CKSDSC--------KVEGFLSKPGQGSGRNLGDRQYF 170
+ L+ V + DS V G++S+ G GR+ DRQ+
Sbjct: 225 MHGLQKVGLHLDLNEYKEKMLKKYSEDSTLDDADHRIAVTGYISRASFGCGRSGKDRQFI 284
Query: 171 FVNDRPVDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECS 230
++N RPVD P+V K N++Y+ N+ QYP+ I+NF + + DVNVTPDKR V +E
Sbjct: 285 YINKRPVDYPQVLKCCNDIYRSFNNVQYPVIILNFELSPQFVDVNVTPDKRTVLLHNEEY 344
Query: 231 ILHALREGL 239
+L +L E L
Sbjct: 345 VLQSLAEKL 353
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 47/71 (66%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I IN+ VHRI +GQVI DL +AVKE+VENSLDA A +EI + YG E + DNG G
Sbjct: 5 INAINQADVHRITSGQVIIDLVAAVKEVVENSLDAHADKLEITFRNYGLEAIECADNGDG 64
Query: 72 ISPNNFKVRAV 82
I +NF A+
Sbjct: 65 IPDSNFDSLAL 75
>gi|440634192|gb|ELR04111.1| hypothetical protein GMDG_01415 [Geomyces destructans 20631-21]
Length = 1087
Score = 187 bits (476), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 98/222 (44%), Positives = 129/222 (58%), Gaps = 25/222 (11%)
Query: 601 ATTELERLFRKEDFGRMKVIGQFNLGFIIG-----------KLDQDLFIVDQHAADEKYN 649
A +L K DF +MK+IGQFNLGFI+ K D+FI+DQHA+DEKYN
Sbjct: 844 AEEKLSLTIHKSDFAKMKIIGQFNLGFILASRTSHGSDSTNKASDDVFIIDQHASDEKYN 903
Query: 650 FERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLK 709
FERL ST + Q L++P L LT EE + H+D + NGF L D A G R L
Sbjct: 904 FERLQASTTVQSQRLVQPKPLSLTAVEEEIVIEHLDALETNGFLLSIDHDAPVGERCHLV 963
Query: 710 AVPFSKKITFGVEDVKDLISTLADN-QGECSIISSYKMDTADSVCPSRVRAMLASRACRS 768
A+P S++ TF + D+++LI L + G+ PS+VR M A RACRS
Sbjct: 964 ALPLSRETTFSLSDLEELIVLLTEAPPGQIP-------------RPSKVRKMFAMRACRS 1010
Query: 769 SIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
S+MIG L +M K++ H+ +++ PWNCPHGRPTMRHL L
Sbjct: 1011 SVMIGRTLTTKQMAKLVGHMGEIDKPWNCPHGRPTMRHLCGL 1052
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 99/201 (49%), Gaps = 19/201 (9%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
R V + YA + GV+ T GK K+ V T+G+ + ++NI VFG L P+
Sbjct: 173 RVVAVLGQYACVQTGVKINVTQQAGKGRKTTVFATKGNPTTRENIANVFGAKTLVALVPL 232
Query: 140 AI-------------------CKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLP 180
+ + ++ G +SKP G GR L D+Q FFVN RP LP
Sbjct: 233 DLNLELEPSSGPSQRWSTQDDGGTKEVRIVGHISKPISGEGRQLPDKQMFFVNSRPCGLP 292
Query: 181 KVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQ 240
+V+K NE+YK N+ Q P N + T DVNV+PDKR + ++ S+L L+ L
Sbjct: 293 QVAKAFNEVYKSYNNNQSPFIFANIELETHLYDVNVSPDKRTIMLHEQNSMLEQLKLSLT 352
Query: 241 EIYSPNNASYSVNKVEQLIEP 261
E++ + + ++++ +P
Sbjct: 353 ELFEKQDYAVPISRLSSQKQP 373
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 49/72 (68%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
TI+ I +H+I +GQVI DL S VKEL ENSLDAGA+SIE+ K G E +V DNG
Sbjct: 3 TIKAIEGRTIHQIQSGQVIVDLCSVVKELAENSLDAGASSIEVRFKNQGLESIEVHDNGA 62
Query: 71 GISPNNFKVRAV 82
GI+ N++ A+
Sbjct: 63 GIASQNYETIAL 74
>gi|322800065|gb|EFZ21171.1| hypothetical protein SINV_06397 [Solenopsis invicta]
Length = 672
Score = 187 bits (476), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 92/217 (42%), Positives = 133/217 (61%), Gaps = 10/217 (4%)
Query: 599 AAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTV 658
+ A EL++ K+ F +M++IGQFNLGFII +L+ DLFI+DQHA DEK+ FE+LS T
Sbjct: 466 SEAEKELQKELTKDSFEKMEIIGQFNLGFIIARLEDDLFIIDQHATDEKFRFEKLSNETK 525
Query: 659 LNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKIT 718
L Q L+ P L+ + E + ++ NGF+ + A G + L +P S
Sbjct: 526 LKTQKLIVPKLLNFSALNETILIDNLQTFENNGFTFNINEQAEPGKKVELIGMPVSGNWQ 585
Query: 719 FGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGR 778
FG ED+++LI + + E + Y+ PSRVR MLASRACRS++MIG AL
Sbjct: 586 FGQEDIEELIFLIREAGNENKHM--YR--------PSRVRQMLASRACRSAVMIGTALNT 635
Query: 779 NEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRK 815
+EMQ+++ + + +PWNCPHGRPT+RHL+ L + K
Sbjct: 636 SEMQRLVTQMTQMYNPWNCPHGRPTIRHLLSLLLVNK 672
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 95/194 (48%), Gaps = 15/194 (7%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
RAV + +Y L++ ++ C+N ++++ T+ + NI +VFG + + +
Sbjct: 182 RAVQVLYSYCLVSTNIKITCSNLLAGKSPNLIVTTRNVDDVLSNINSVFGKKSLDGIVKL 241
Query: 140 AICKSDSCKV---------------EGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSK 184
+ D + E ++S GR+ DRQ+F+VN RP DL K+SK
Sbjct: 242 ELQSPDETVLQEYNLPSDATVDFDWECYVSTCDHAIGRSSPDRQFFYVNGRPCDLTKISK 301
Query: 185 LVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYS 244
LVN +Y N +QYP N + + DVNVTPDKR +F + E IL L+ L +
Sbjct: 302 LVNSVYHRYNIKQYPFVFFNIKLDRQCADVNVTPDKRTIFVTQERLILATLKFSLITKWD 361
Query: 245 PNNASYSVNKVEQL 258
+++V + +L
Sbjct: 362 KLQGNFTVKTLTEL 375
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 52/76 (68%)
Query: 3 VETPTNSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEW 62
V T S I INK +H IC+GQV+ DL+ AVKELVENSLD+GAT I++ L +YG+
Sbjct: 5 VATTEKSKKIEAINKETIHHICSGQVVLDLAIAVKELVENSLDSGATVIDVKLTDYGKTC 64
Query: 63 FQVVDNGCGISPNNFK 78
V DNG G+S +F+
Sbjct: 65 ISVSDNGSGVSEQDFE 80
>gi|343428639|emb|CBQ72169.1| related to PMS1-DNA mismatch repair protein [Sporisorium reilianum
SRZ2]
Length = 947
Score = 187 bits (476), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 112/294 (38%), Positives = 159/294 (54%), Gaps = 27/294 (9%)
Query: 531 APVPSSSLDICSTLQFSIQDLRKRRQQRLSIMQSSCHTSGSVKMRRCFAAATLELSQPEN 590
A V S + D + F + L++R Q+R + + S ++ L+ + EN
Sbjct: 645 AVVESDAFDQDDIIAFDMDRLQQRMQKRRA--SALALKSAPAELPASGDEELLQGAGVEN 702
Query: 591 EERKARALAAATTELERLFRKEDFGRMKVIGQFNLGFIIGK-----------LDQDLFIV 639
++ A L R+ K+DF M V+GQFNLGFII + +D DLFIV
Sbjct: 703 QDE-----AQVERALSRVIHKQDFAAMDVVGQFNLGFIIARRRTQPDASSDEMD-DLFIV 756
Query: 640 DQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPH 699
DQHA+DEK+NFE L +T + Q L+ P L+L+ +E+VA H + NGF +
Sbjct: 757 DQHASDEKFNFETLQLTTQIRSQKLIVPRPLELSASDELVAIEHQATLLSNGFEVAFSET 816
Query: 700 ALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRA 759
L G R +L A P SK FG +D+++L+ L D +S + A S+ S+ RA
Sbjct: 817 GLPGTRVKLVAQPISKATVFGAKDLEELLYLLRD--------TSAGSEAAKSIRCSKARA 868
Query: 760 MLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTI 813
M ASRACR SIMIG AL + M +L+++ + PWNCPHGRPTMRHL L T+
Sbjct: 869 MFASRACRKSIMIGTALNKARMGAVLKNMGTIEQPWNCPHGRPTMRHLACLKTL 922
Score = 129 bits (325), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 113/227 (49%), Gaps = 36/227 (15%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSS---LKDNIITVFGMNIYNCLEP-- 138
L QAYAL+ KGVR+ TNT K+ S++ L N+ +FG + L P
Sbjct: 188 LLQAYALVTKGVRWTTTNTPAGGRKTPQFSVNSSNADNYLCANVSALFGAKVVPTLMPLN 247
Query: 139 -------------------------------VAICKSDSCKVEGFLSKPGQGSGRNLGDR 167
VA ++ + V G +SKP GSGR DR
Sbjct: 248 LELTFSVAPSRSKLAHTAAEADGEEGRDDEAVARDETSTVHVVGLISKPVYGSGRTSSDR 307
Query: 168 QYFFVNDRPVDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSD 227
Q+F++N RP + +VS+ NE+YK NS +P + +F +PT + DVNV+PDKR +F +
Sbjct: 308 QFFYINGRPWEAGRVSRAFNEVYKSFNSNHFPFVVADFRLPTDSYDVNVSPDKRTIFLHE 367
Query: 228 ECSILHALREGLQEIYSPNNASYSVNKVEQLIEPEKSGPSSGAESCM 274
E ++ +++ L+E+++P+ A++ VN + SS A+S +
Sbjct: 368 ESRLIEKVKQALEELFAPSRATFLVNGASHSLRNGSGVTSSTAQSRL 414
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Query: 2 DVETPTNSPT-IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGE 60
D E + +P+ IR I VHRI +GQV+ DL +AVKEL+EN+LDA AT+I I ++YG
Sbjct: 3 DAEDNSTAPSVIRAIPSNDVHRITSGQVVLDLQTAVKELIENALDASATNIAIHFRDYGA 62
Query: 61 EWFQVVDNGCGISPNNF 77
+ F+VVDNG GI P+N+
Sbjct: 63 DAFEVVDNGTGIDPSNY 79
>gi|393906452|gb|EJD74284.1| CBR-PMS-2 protein [Loa loa]
Length = 832
Score = 187 bits (476), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 91/211 (43%), Positives = 126/211 (59%), Gaps = 13/211 (6%)
Query: 600 AATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVL 659
A +EL K+DF M+++GQFN GFII +L+ DLFIVDQHA+DEKYNFER + +
Sbjct: 629 VAESELAAYISKKDFESMEILGQFNKGFIIVRLNNDLFIVDQHASDEKYNFERFQKKARI 688
Query: 660 NQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITF 719
Q L+ P LDL +E + ++DI NGF + D + G R L A+P + F
Sbjct: 689 QTQHLISPRVLDLGVVKEAILRDNVDIFNYNGFEFQFDDEEVVGKRALLTAIPVLQSWQF 748
Query: 720 GVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRN 779
+ D+ +++S L D G Y+ P+++R + ASRACR S+MIG +L
Sbjct: 749 SISDIDEMLSVLCDFPGMM-----YR--------PAKLRKLFASRACRKSVMIGSSLTMA 795
Query: 780 EMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
M+KI+ HL L+ PWNCPHGRPT+RHL L
Sbjct: 796 HMEKIVRHLGTLDHPWNCPHGRPTLRHLCSL 826
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 92/180 (51%), Gaps = 17/180 (9%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFG--------MNIYNC 135
+ Q++AL VRFV + ++ G++S+KD ++ +FG ++I
Sbjct: 185 VVQSFALSRTNVRFVVNSLMDGKQHQALVTPGGNASIKDIVVNLFGARFEKGTVLDIIQQ 244
Query: 136 LEPVAIC---------KSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLV 186
+IC K D K+ G++S G G++ DRQ+ + N RPVD K+ ++
Sbjct: 245 EPDESICALYGISDHSKFDDIKITGYISSCVHGQGKSTADRQFVYFNKRPVDYAKLCRIA 304
Query: 187 NELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPN 246
NE+Y+ N QY + I+ VP + DVNV+PDKR VFF E + LR L ++P+
Sbjct: 305 NEVYQQYNRGQYCLLILFVDVPPESIDVNVSPDKRSVFFEREKELFALLRASLLATFAPH 364
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 48/78 (61%), Gaps = 4/78 (5%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I I V +IC GQVI L+ A KEL++NSLDA A +IEI +K+ G E +V+D+G G
Sbjct: 13 IHAIPAEVCRKICTGQVIITLAGACKELIDNSLDAQAKTIEIRVKKMGFERVEVIDDGTG 72
Query: 72 ISPNNFKVRAVFLCQAYA 89
I NF LC+ ++
Sbjct: 73 IHSLNFDA----LCKPHS 86
>gi|346975429|gb|EGY18881.1| DNA mismatch repair protein PMS1 [Verticillium dahliae VdLs.17]
Length = 1035
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 97/231 (41%), Positives = 136/231 (58%), Gaps = 24/231 (10%)
Query: 601 ATTELERLFRKEDFGRMKVIGQFNLGFIIG-------------KLDQDLFIVDQHAADEK 647
A +L + K DF M V+GQFNLGFI+ K LFI+DQHA+DEK
Sbjct: 788 AEDKLSLIISKSDFDDMAVVGQFNLGFILAVRHASGSANGEHEKSHDSLFIIDQHASDEK 847
Query: 648 YNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHAL--AGLR 705
YNFERL T + Q L++P +L+LT EE + ++ + NGF + D GLR
Sbjct: 848 YNFERLQSCTTVQSQHLVQPKQLELTALEEEIVRENISALEVNGFKVRIDDSGSQPVGLR 907
Query: 706 FRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRA 765
L A+P S++ TF + D+++LIS L D+ T+ + PSRVR M A RA
Sbjct: 908 CELVALPLSRETTFTLADLEELISLLGDHD---------LTGTSPAPRPSRVRKMFAMRA 958
Query: 766 CRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKN 816
CRSSIM+G AL +M++++ H+ +L+ PWNCPHGRPTMRH+ +L + +N
Sbjct: 959 CRSSIMVGKALTHRQMERLVRHMGELDKPWNCPHGRPTMRHIYELASWDEN 1009
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 104/205 (50%), Gaps = 23/205 (11%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCL--- 136
+ + L YA I G++F + K + ++ T+G+++++DNII +FG L
Sbjct: 173 KVITLLNQYACIQTGLKFTISQQPNKGKRIILFSTKGNTTVRDNIINIFGAKTTAVLTRL 232
Query: 137 ------EPVAICKSDSCK----------VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLP 180
EP A S K V+GF+S+P G GR DRQ FFVN RP LP
Sbjct: 233 DVELQFEPSAESGLTSAKQPDQSASPVHVKGFVSRPAHGEGRQTPDRQMFFVNGRPCILP 292
Query: 181 KVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQ 240
+ +K+ N++Y+ NS Q P + + + T DVNV+PDKR + ++ +L +LRE L
Sbjct: 293 QFAKVFNDVYRSYNSSQSPFILADIQLDTHLYDVNVSPDKRTILMHEQNRMLESLREALT 352
Query: 241 EIYSPNNASYSVNKVEQLIEPEKSG 265
++ + S ++ + P K G
Sbjct: 353 SLFESQDYSIPLSH----MAPSKPG 373
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 48/67 (71%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ I VHRI +GQVI DL S VKELVENSLDA AT+I++ K G E +V DNG G
Sbjct: 4 IKAIEANTVHRIQSGQVIVDLCSVVKELVENSLDANATAIDVRFKNQGLESIEVHDNGSG 63
Query: 72 ISPNNFK 78
ISP+N++
Sbjct: 64 ISPDNYE 70
>gi|358053762|dbj|GAB00070.1| hypothetical protein E5Q_06772 [Mixia osmundae IAM 14324]
Length = 862
Score = 187 bits (474), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 95/210 (45%), Positives = 129/210 (61%), Gaps = 16/210 (7%)
Query: 605 LERLFRKEDFGRMKVIGQFNLGFIIGKLDQ----DLFIVDQHAADEKYNFERLSQSTVLN 660
L R +EDF RM+++GQFNLGFII + + D+FI+DQHA+DEKYNFERL T +
Sbjct: 647 LTRTVAQEDFSRMQILGQFNLGFIIVRRSERSQDDIFIIDQHASDEKYNFERLQAHTKMQ 706
Query: 661 QQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFG 720
Q LL P L T +E++A H +I+R NGF + + A G R +L A P S+K TFG
Sbjct: 707 SQRLLAPRLLHWTASDELLAIEHEEILRANGFEIAVEREARVGQRVKLIAQPMSQKTTFG 766
Query: 721 VEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNE 780
V ++++L+ L +N G V P++ R M A RACRSS+MIG AL + +
Sbjct: 767 VPELEELLFLLRENGGRT------------MVRPTKTRKMFAMRACRSSVMIGTALSKQQ 814
Query: 781 MQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
M I+ H+ + PWNCPHGRPTMR L +
Sbjct: 815 MTSIIRHMGTMQEPWNCPHGRPTMRFLAHV 844
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 121/233 (51%), Gaps = 25/233 (10%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFG----MNI------Y 133
L QAYALI+ GV+ V +NTT KS+ ++T S +L+D ++FG N+ +
Sbjct: 181 LLQAYALISVGVKVVVSNTTASGTKSIQIQTANSRTLRDTFTSLFGSKPLANLVDLDLSF 240
Query: 134 NCLEPVA---------ICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSK 184
+ + P + + S +V G +S+PG GR GDRQY ++N RP D K+++
Sbjct: 241 SFMPPRSSQRLRATNDMADSILVRVRGLISRPGH--GRTAGDRQYLYLNGRPFDAGKLTR 298
Query: 185 LVNELYKGANS-RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIY 243
+N++YK S YP+ + +F +PT D+N++PDKR +F E + AL++ L+ +
Sbjct: 299 AINDVYKSCGSASSYPVIVADFSLPTDTYDLNLSPDKRTIFLHSEQAFTDALKDSLRAFF 358
Query: 244 SPNNASYSVNKVEQLIEPEKSGPSSGAESCMFLEQLSPDG-NGCIEILNEQQI 295
Y++ + + P S S + Q++P +G I I + Q I
Sbjct: 359 DRYQGVYALKQAKD--TPTPSPTKSQPLAAYAARQITPAQLSGNISIPSSQSI 409
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 51/67 (76%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
+IRPI+ V RI AGQVI DL +AVKEL+ENSLDAGATS+EI K++G E +V+DNG
Sbjct: 2 SIRPIDASSVRRITAGQVILDLRTAVKELIENSLDAGATSVEIRFKDHGLESIEVIDNGS 61
Query: 71 GISPNNF 77
GI +F
Sbjct: 62 GIDSKDF 68
>gi|365987962|ref|XP_003670812.1| hypothetical protein NDAI_0F02510 [Naumovozyma dairenensis CBS 421]
gi|343769583|emb|CCD25569.1| hypothetical protein NDAI_0F02510 [Naumovozyma dairenensis CBS 421]
Length = 787
Score = 187 bits (474), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 92/210 (43%), Positives = 130/210 (61%), Gaps = 14/210 (6%)
Query: 605 LERLFRKEDFGRMKVIGQFNLGFIIGKL----DQDLFIVDQHAADEKYNFERLSQSTVLN 660
L + +KEDF +MK++GQFNLGFII D DLF++DQHAADEKYNFERL + T
Sbjct: 576 LTLMVKKEDFKKMKIVGQFNLGFIIVTRKIGNDYDLFVIDQHAADEKYNFERLQKITTFK 635
Query: 661 QQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFG 720
Q L+ P ++L+ +E++ + KNGF L D +A G + ++ A+P SK+
Sbjct: 636 SQRLIVPQPVELSIIDELIVIDNHSTFEKNGFKLIIDKNASQGQKIKIVALPVSKQTMIN 695
Query: 721 VEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNE 780
++D +LI + +N G ++T D C S+ R + A RACRSS+M+G L +
Sbjct: 696 IDDFNELIHAIRENAG---------LNTEDLRC-SKYRKLFAMRACRSSVMVGKPLTKKA 745
Query: 781 MQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
M I+ +L+DL PWNCPHGRPTMRHL +L
Sbjct: 746 MTTIVHNLSDLKKPWNCPHGRPTMRHLTEL 775
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 100/186 (53%), Gaps = 22/186 (11%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFG---------- 129
+ + L Q YA+I + ++F N + K K+ VL T + S+ ++++FG
Sbjct: 172 KCISLLQGYAIIQENIKFSVWNVSAKGRKTSVLSTPLAPSIPKKVLSIFGPSSTYGLDVL 231
Query: 130 --MNIYNCLEPVAICK----------SDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPV 177
N L+ + K + +V+G++SK G GRN DRQ+F++N RP+
Sbjct: 232 DLALDLNPLKKDMMKKYVNDTTFLNLDYTIQVKGYISKHSLGCGRNSKDRQFFYINKRPI 291
Query: 178 DLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALRE 237
+ P++SK N++Y+ N+ Q+P +N ++P + DVNVTPDKR VF +E +L L+
Sbjct: 292 EYPQLSKCCNDIYRQFNNAQFPSIFLNLVIPPQVIDVNVTPDKRIVFLQNEKYVLEELKI 351
Query: 238 GLQEIY 243
L E +
Sbjct: 352 RLYEYF 357
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 49/71 (69%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I PI VH+I +GQ+I DL +AVKELV+NS+DA AT I+I K YG E + DNG G
Sbjct: 5 ITPIGSKDVHKITSGQIIIDLVTAVKELVDNSIDAHATQIDIIFKNYGIESIECSDNGDG 64
Query: 72 ISPNNFKVRAV 82
I+P N++ A+
Sbjct: 65 ITPENYEFLAL 75
>gi|389743549|gb|EIM84733.1| hypothetical protein STEHIDRAFT_99554 [Stereum hirsutum FP-91666 SS1]
Length = 1237
Score = 187 bits (474), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 140/427 (32%), Positives = 198/427 (46%), Gaps = 110/427 (25%)
Query: 473 SSEGNTNEKPREELVTQEKATPLLNVPSIVSSSNDLKKNSEDLSVAASHLQFSGSILDAP 532
S +N +P T E PL N S+DL + S+ LS + L FS DAP
Sbjct: 843 SEPSTSNHRPDRVRETDEGTAPLQN-------SSDLGRPSQ-LSTNTTPL-FSSD--DAP 891
Query: 533 VP----SSSLDICST--LQFSI-------QDLRKR--RQQRLSIMQSSCHTSGSVKMRRC 577
P +SSL + T L F + + LR R + + + Q+S + +V
Sbjct: 892 RPEIERTSSLSVTDTPTLSFDLSRVTSKWKALRSRLTKARETTTAQASSQSQSNVNASEE 951
Query: 578 FAAATLELSQPENEERKARALAAATTELERLFRKEDFGRMKVIGQFNLGFIIGK------ 631
A A + + + A L R+ KEDFG M+V+GQFNLGFI+ +
Sbjct: 952 VAGAGITCTDG----------SKADEVLTRVLHKEDFGIMEVVGQFNLGFIVARRRKGGQ 1001
Query: 632 -------LDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHM 684
LD DLFI+DQHAADEKY FE L Q+T + Q L RP +L+LT +E+VA ++
Sbjct: 1002 GAKNGEQLD-DLFIIDQHAADEKYKFETLQQTTKIESQRLFRPRELELTAADELVAMENI 1060
Query: 685 DIIRKNGFSL--EEDPHALAGL-------------------------------------- 704
++++NGF + E+D ++G+
Sbjct: 1061 SVLKQNGFEILVEDDEKPISGVGDTDIPLAQANERAELGMAVYNDEEGYEGSASLEGSSG 1120
Query: 705 ---RFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAML 761
R +L A P S F VED ++L+ + D + T V S+ RAM
Sbjct: 1121 SRRRVKLVAQPISGNTVFDVEDFEELLHKMRD------------LPTGTMVRCSKARAMF 1168
Query: 762 ASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKN----- 816
ASRACR SIM+G AL +M ++ H+ + PWNCPHGRPTMRHL D+ ++K
Sbjct: 1169 ASRACRKSIMVGMALENKQMTSVVRHMGTMEQPWNCPHGRPTMRHLTDVKAVKKTKKDRK 1228
Query: 817 IDENGAG 823
ID G G
Sbjct: 1229 IDWTGFG 1235
Score = 102 bits (255), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 106/223 (47%), Gaps = 45/223 (20%)
Query: 79 VRAVFLCQAYALI-------AKGVRFVCTNTTGKNVKSVVLKTQG-------------SS 118
+A+ L AYAL+ + GVR +N K++ L+T+G +
Sbjct: 185 TKALNLLIAYALVPCSPSLQSPGVRLTVSNHPDGGRKTIQLRTEGPASGNASTSTLDART 244
Query: 119 SLKDNIITVFG----MNIYNC-----LEP----------------VAICKSDSCKVEGFL 153
SL+ + +V+G NI + +EP +V G +
Sbjct: 245 SLRTAVSSVWGPKALENIVDFELSFDVEPEKSMLRRRALAAADDGDDTDARHRIQVRGLV 304
Query: 154 SKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACD 213
SK GR+ DRQ+F++N RP + KV K NE+YK N+ Q P + +FI+PT +CD
Sbjct: 305 SKFAPSCGRSGTDRQFFYINGRPCNPVKVQKAFNEVYKTFNATQSPFVMADFIIPTDSCD 364
Query: 214 VNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASYSVNKVE 256
+NV+PDKR + E ++ AL+ L E ++P +++ ++ +
Sbjct: 365 INVSPDKRTILLHSEGHLVEALKNALNEFFAPTRSTFDLSSTQ 407
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 50/71 (70%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I I+ VHRI +GQV+ DL +AVKELVENSLDA +TSIE+ K YG + +V+DNG G
Sbjct: 15 IGAIDSHSVHRITSGQVVIDLQTAVKELVENSLDADSTSIEVRFKNYGLKSIEVIDNGSG 74
Query: 72 ISPNNFKVRAV 82
I P ++ A+
Sbjct: 75 IKPEDYDAVAL 85
>gi|71001986|ref|XP_755674.1| DNA mismatch repair protein (Pms1) [Aspergillus fumigatus Af293]
gi|66853312|gb|EAL93636.1| DNA mismatch repair protein (Pms1), putative [Aspergillus fumigatus
Af293]
gi|159129732|gb|EDP54846.1| DNA mismatch repair protein (Pms1), putative [Aspergillus fumigatus
A1163]
Length = 1044
Score = 187 bits (474), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 96/211 (45%), Positives = 136/211 (64%), Gaps = 14/211 (6%)
Query: 611 KEDFGRMKVIGQFNLGFII-------GKLDQ--DLFIVDQHAADEKYNFERLSQSTVLNQ 661
K+DF RM++IGQFNLGFI+ G D +LFI+DQHA+DEK+NFERL TV+
Sbjct: 780 KDDFARMRIIGQFNLGFILATRPSEDGSADSKDELFIIDQHASDEKFNFERLQAETVVQN 839
Query: 662 QPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHA--LAGLRFRLKAVPFSKKITF 719
Q L++P +LDLT EE + + + KNGF +E D G R +L ++P SK++ F
Sbjct: 840 QRLVQPKRLDLTAVEEEIVIENRAALEKNGFVVEVDDSGNEPIGQRCKLISLPLSKEVVF 899
Query: 720 GVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRN 779
GV D+++LI L++ S S+ + PS+VR M A RACRSSIMIG +L +
Sbjct: 900 GVRDLEELIVLLSEMPATDSRGSAMQTHIPR---PSKVRKMFAMRACRSSIMIGKSLTQT 956
Query: 780 EMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
+M +++ ++ ++ PWNCPHGRPTMRHL+ L
Sbjct: 957 QMVRVVRNMGTIDKPWNCPHGRPTMRHLMTL 987
Score = 129 bits (323), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 106/198 (53%), Gaps = 18/198 (9%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCL------- 136
L AYA I+ GVRF NT GKN +V T G+ + K+NI V+G L
Sbjct: 177 LLHAYACISTGVRFSVRNTVGKNRNVMVFSTNGNQTTKENIANVYGAKTLLALIPLDLTL 236
Query: 137 --EPVAICKS------DSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNE 188
EP A + + +V+G +S+P G GR DRQ FFVN RP LP+++K NE
Sbjct: 237 EFEPSAAGRRTAEGELHTIQVKGHISRPVFGEGRQTPDRQMFFVNSRPCGLPQIAKAFNE 296
Query: 189 LYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNA 248
+YK N Q P + + T A DVNV+PDKR + D +++ +L++ L E++ +
Sbjct: 297 VYKSFNVSQSPFVFADLHMDTNAYDVNVSPDKRTILLHDAGALIDSLKQSLTEMFEATDQ 356
Query: 249 SYSVNKVEQLIEPEKSGP 266
+ ++ Q+ + ++SGP
Sbjct: 357 TVPLS---QIADYKQSGP 371
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/68 (60%), Positives = 49/68 (72%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
TI+ I VH+I +GQVI DL S VKELVENSLDAGATSIE+ K G + +V DNG
Sbjct: 3 TIKAIEARSVHQIQSGQVIVDLCSVVKELVENSLDAGATSIEVRFKNNGLDSIEVQDNGS 62
Query: 71 GISPNNFK 78
GISP N++
Sbjct: 63 GISPENYE 70
>gi|358382560|gb|EHK20231.1| hypothetical protein TRIVIDRAFT_48473 [Trichoderma virens Gv29-8]
Length = 961
Score = 186 bits (473), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 100/248 (40%), Positives = 145/248 (58%), Gaps = 31/248 (12%)
Query: 583 LELSQPENEERKARAL-----AAATTELERLFRKEDFGRMKVIGQFNLGFII-------- 629
L SQP + A ++ + A + L + K DF +M++IGQFNLGFII
Sbjct: 697 LRTSQPGSTSHNASSVERIDASDAESRLPLIISKGDFSKMRIIGQFNLGFIIAVKPASRL 756
Query: 630 -----GKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHM 684
GK D+ LFI+DQHA+DEKYN+E+L +T + Q L+ P +L LT EE + +
Sbjct: 757 GSGVEGKYDE-LFIIDQHASDEKYNYEKLQNTTEIQSQRLVHPKRLQLTALEEEIILENA 815
Query: 685 DIIRKNGFSLEEDPHAL--AGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIIS 742
+ NGF + D G R +L ++P S+++TF ++D+++LIS L D E S I
Sbjct: 816 TALNANGFKVNIDTTGRFSVGSRCQLTSLPLSREVTFKLDDLEELISLLGDKSAESSYIP 875
Query: 743 SYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRP 802
PS+V+ M A RACRSSIMIG A+ +++M ++ H+ +L+ PWNCPHGRP
Sbjct: 876 R----------PSKVQKMFAMRACRSSIMIGKAMTKSQMHSLVNHMGELDKPWNCPHGRP 925
Query: 803 TMRHLVDL 810
T+RHL L
Sbjct: 926 TIRHLSRL 933
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 101/205 (49%), Gaps = 20/205 (9%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
+ + L YA I V+F + K + ++ T+G+ + +DNII +FG L P+
Sbjct: 173 KVIALLNQYACIQTNVKFSVSQQPTKGKRILLFSTKGNPTTRDNIINIFGAKTLTALIPL 232
Query: 140 AI--------CKSD------------SCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDL 179
+ +SD ++ G +SKP G GR DRQ FFVN RP L
Sbjct: 233 DLHLELKPSGTRSDVRIGDKLGPNSHDVRIVGHISKPAHGEGRQTPDRQMFFVNGRPCSL 292
Query: 180 PKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGL 239
P+++K NE+Y+ N+ Q P + + T DVNV+PDKR + D+ ++L LR L
Sbjct: 293 PQLAKAFNEVYRSYNNSQSPFIFADVQLDTMLYDVNVSPDKRSILLHDQNNLLDTLRSSL 352
Query: 240 QEIYSPNNASYSVNKVEQLIEPEKS 264
+++ + S S+ Q ++ + S
Sbjct: 353 SQLFDTHEDSISIATSTQNVKAQSS 377
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 50/72 (69%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
TI+ I+ VH+I +GQVI DL S VKELVENS+D+GAT I++ K G + +V DNG
Sbjct: 3 TIKQIDGRSVHQIQSGQVIVDLCSVVKELVENSVDSGATIIDVRFKNQGLDSIEVQDNGS 62
Query: 71 GISPNNFKVRAV 82
GISP N+ A+
Sbjct: 63 GISPANYSSVAL 74
>gi|328855348|gb|EGG04475.1| hypothetical protein MELLADRAFT_37375 [Melampsora larici-populina
98AG31]
Length = 448
Score = 186 bits (473), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 107/236 (45%), Positives = 137/236 (58%), Gaps = 22/236 (9%)
Query: 579 AAAT-----LELS-QPENEERKARALAAATTELERLFRKEDFGRMKVIGQFNLGFII-GK 631
AAAT LELS P+ K++ A A L R K DF MK+IGQFNLGFII G
Sbjct: 219 AAATVIDLNLELSINPDKVVLKSQLEAEAEAALSRTVHKSDFANMKIIGQFNLGFIIVGL 278
Query: 632 LDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNG 691
++D+ IVDQHA+DEKYNFERL + T L+ Q LL P LDL EE+ A H D++ NG
Sbjct: 279 GEEDVLIVDQHASDEKYNFERLQRDTKLSGQRLLTPRTLDLPAAEELTAMEHRDLLEMNG 338
Query: 692 FSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADS 751
F + D A G R +L A P S+ +G + + CS+ A
Sbjct: 339 FGILIDEDAPVGQRVKLVAQPVSRDTIWGPSGMSFCL---------CSLTG------APP 383
Query: 752 VCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHL 807
+ PS+ R M ASRACRSS+MIGD+L +M+ IL+H+ + PW CPHGRPTMR +
Sbjct: 384 LRPSKTRKMFASRACRSSVMIGDSLTTGQMRSILDHMGMMEEPWACPHGRPTMRWV 439
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 44/58 (75%)
Query: 15 INKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGI 72
I+ VH++ + QV+ DL +AVKEL+ENSLDAGA ++EI KEYG + +V+DNG GI
Sbjct: 1 IDLNSVHKLTSSQVVIDLQTAVKELLENSLDAGANAVEIRFKEYGLDGLEVIDNGTGI 58
>gi|121716012|ref|XP_001275615.1| DNA mismatch repair protein (Pms1), putative [Aspergillus clavatus
NRRL 1]
gi|119403772|gb|EAW14189.1| DNA mismatch repair protein (Pms1), putative [Aspergillus clavatus
NRRL 1]
Length = 1062
Score = 186 bits (473), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 101/244 (41%), Positives = 145/244 (59%), Gaps = 15/244 (6%)
Query: 591 EERKARALAAATTELERLFRKEDFGRMKVIGQFNLGFIIG---------KLDQDLFIVDQ 641
+ER+A A L K+DF RM++IGQFNLGFI+ + +LFI+DQ
Sbjct: 779 DEREATPAGTAEERLSLTVTKDDFARMRIIGQFNLGFILATRSPEGSSSETKDELFIIDQ 838
Query: 642 HAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHA- 700
HA+DEK+NFERL TV+ Q L++ +LDLT EE + + + KNGF +E D
Sbjct: 839 HASDEKFNFERLQAETVVQNQRLVQSKRLDLTAVEEEIVIENQFALEKNGFVVEVDDSGD 898
Query: 701 -LAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRA 759
G R +L ++P SK++ FG+ D+++LI L++ S S+ + PS+VR
Sbjct: 899 EPIGQRCKLVSLPLSKEVVFGMRDLEELIVLLSEMPATTSARSAAPSNIPR---PSKVRK 955
Query: 760 MLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKNIDE 819
M A RACRSSIMIG L + +M +++ ++ ++ PWNCPHGRPTMRHL+ L + DE
Sbjct: 956 MFAMRACRSSIMIGKNLTQKQMVRVVRNMGTIDKPWNCPHGRPTMRHLMTLGQWSE-WDE 1014
Query: 820 NGAG 823
G G
Sbjct: 1015 FGPG 1018
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 102/193 (52%), Gaps = 15/193 (7%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCL------- 136
L AYA ++ GVRF NT GKN +VV T + + KDNI V+G L
Sbjct: 177 LLHAYACVSTGVRFSVRNTMGKNRNAVVFSTNDNQTTKDNIANVYGAKTLLALIPLDLVL 236
Query: 137 --EPVAICKSDSCKV------EGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNE 188
EP A + + V +G +S+P G GR DRQ FFVN RP LP+++K NE
Sbjct: 237 EFEPSAAARRTAGGVPNKILVKGHISRPVFGEGRQTPDRQMFFVNARPCGLPQIAKAFNE 296
Query: 189 LYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNA 248
+YK N Q P +F + T A DVNV+PDKR + D +++ AL++ L E++ ++
Sbjct: 297 VYKSFNVSQSPFVFADFNMDTNAYDVNVSPDKRTILLHDAGALIDALKQSLTELFETSDQ 356
Query: 249 SYSVNKVEQLIEP 261
+ ++V +P
Sbjct: 357 TVPQSQVAGQRQP 369
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/68 (60%), Positives = 49/68 (72%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
TI+ I VH+I +GQVI DL S VKELVENSLDAGATSIE+ K G + +V DNG
Sbjct: 3 TIKAIEARSVHQIQSGQVIVDLCSVVKELVENSLDAGATSIEVRFKNNGLDLIEVQDNGA 62
Query: 71 GISPNNFK 78
GISP N++
Sbjct: 63 GISPENYE 70
>gi|308805450|ref|XP_003080037.1| putative PMS2 postmeiotic segregation incre (ISS) [Ostreococcus
tauri]
gi|116058496|emb|CAL53685.1| putative PMS2 postmeiotic segregation incre (ISS) [Ostreococcus
tauri]
Length = 1013
Score = 186 bits (472), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 113/300 (37%), Positives = 164/300 (54%), Gaps = 60/300 (20%)
Query: 543 TLQFSIQDLRKRRQ---QRLSIMQSSCHTSGSVKMRRCFAAATLELSQPENEERKARALA 599
++ FS++D+ RR+ +R + QS+ + F +A + + + E RA A
Sbjct: 539 SIPFSMEDMLARRRNSHKRATAKQSAV---------KAFDSAHVSAADDDTAESTERATA 589
Query: 600 AATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVL 659
AA ELER+F K DF +M+++GQFNLGFI+ L DLFI+DQHA+DE YNFERL ++T L
Sbjct: 590 AAR-ELERVFDKADFAKMRIVGQFNLGFILATLGDDLFIIDQHASDEIYNFERLQRTTTL 648
Query: 660 NQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEE---------------DPHALAGL 704
++QPL+ P+ LDLT EE +M + KNGF + DP A G
Sbjct: 649 SKQPLIHPVPLDLTASEEQTVLQNMPVFLKNGFGFCDVAESVPGADMNNSSVDPSARCG- 707
Query: 705 RFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKM-----------DTADSV- 752
RL AVP K + F DV +L+S L ++G+ S+ ++ ++ D++ V
Sbjct: 708 SLRLSAVPVLKNVVFDKTDVHELVSML--DRGQHSLPANSQLSIGLTRHDQRGDSSSDVR 765
Query: 753 --CPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
P++ RA LA +ACR +L +L L++PWNCPHGRPTMRHL L
Sbjct: 766 VLRPAKTRAALAMKACRG---------------VLNNLTTLDAPWNCPHGRPTMRHLFAL 810
Score = 158 bits (400), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 78/190 (41%), Positives = 123/190 (64%), Gaps = 4/190 (2%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGS-SSLKDNIITVFGMNIYNCLEP 138
+A+ + QAYAL++K VR +CT+ +GK ++ VL T+G +S+++NI+TVFG + +
Sbjct: 181 KALAIVQAYALVSKSVRILCTHQSGKYGRTNVLHTRGEDASVRENIVTVFGSKMIASMRE 240
Query: 139 VAIC--KSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSR 196
+ + +V GF+S+P G GR DRQ+++VN RPVDLP+ +++VNE Y+ N
Sbjct: 241 IELELEVGTGVRVSGFISEPRSGCGRAGTDRQFYYVNGRPVDLPRAARVVNETYRSFNPN 300
Query: 197 QYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASYSVNKVE 256
Q P+ +++F + T A DVNVTPDKRK+ DE +IL +R+ L E +SP +Y+V + E
Sbjct: 301 QAPMVVLDFQLATNAYDVNVTPDKRKIMLHDEEAILAQMRDKLLEAFSPTRYTYAVTQ-E 359
Query: 257 QLIEPEKSGP 266
EK+ P
Sbjct: 360 APASAEKASP 369
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 48/67 (71%)
Query: 6 PTNSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQV 65
P S I+PI++ VVHRI +GQV+ DL S KEL+EN+LDA A SIE+ K++G + +V
Sbjct: 6 PERSRAIKPIDRAVVHRITSGQVVVDLRSVCKELIENALDATARSIEVRFKDHGVDVVEV 65
Query: 66 VDNGCGI 72
D+G G+
Sbjct: 66 SDDGRGV 72
>gi|83769655|dbj|BAE59790.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 866
Score = 186 bits (472), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 96/236 (40%), Positives = 138/236 (58%), Gaps = 21/236 (8%)
Query: 597 ALAAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQ-------------DLFIVDQHA 643
+L A L K+DFG+M++ GQFNLGFI+ +LFI+DQHA
Sbjct: 637 SLETAEERLSLTVSKDDFGKMRIAGQFNLGFILATRSSTGVSDSAPPSSKDELFIIDQHA 696
Query: 644 ADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHA--L 701
+DEK+NFERL TV+ Q L++P +LDLT EE + + + KNGF +E D
Sbjct: 697 SDEKFNFERLQAETVVQNQRLVQPKQLDLTAVEEEIVIENQSALEKNGFVVEVDDSGNEP 756
Query: 702 AGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAML 761
G R +L ++P SK++ FGV D+++LI L++ + Y PS+VR M
Sbjct: 757 IGRRCKLVSLPLSKEVVFGVRDLEELIVLLSEMPASSTAGPMY------VPRPSKVRKMF 810
Query: 762 ASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKNI 817
A RACRSSIMIG L + +M +++ ++ ++ PWNCPHGRPTMRHL+ L +N+
Sbjct: 811 AMRACRSSIMIGKNLSQKQMTRVVRNMGTIDKPWNCPHGRPTMRHLMSLGQWNENV 866
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/201 (35%), Positives = 99/201 (49%), Gaps = 28/201 (13%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCL------- 136
L AYA ++KGVRF NT K VV T G+ + K+NI V+G L
Sbjct: 177 LLHAYACVSKGVRFNVKNTVAKTRNVVVFSTNGNQTTKENIANVYGAKTLLALIPLDLTL 236
Query: 137 --EPVAICK---------SDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKL 185
EP A K S+ V G +S+P G GR DRQ FFVN RP LP+++K
Sbjct: 237 EFEPSAAGKRAAVDEERESNKIFVRGHISRPVSGEGRQTPDRQMFFVNSRPCGLPQIAKA 296
Query: 186 VNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSP 245
NE+YK N Q P +F + T A DVNV+PDKR + D +++ +L+ L +++
Sbjct: 297 FNEVYKSFNVSQSPFVFADFHMDTNAYDVNVSPDKRTILLHDAGALIESLKTSLTQLFES 356
Query: 246 ----------NNASYSVNKVE 256
NNA S K++
Sbjct: 357 SDQTVPQSQVNNARQSTTKLQ 377
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 48/68 (70%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
TI+ I VH+I +GQVI DL S KELVENSLDAGATSIE+ K G + +V DNG
Sbjct: 3 TIKAIEARSVHQIQSGQVIVDLCSVAKELVENSLDAGATSIEVRFKNNGLDLIEVQDNGS 62
Query: 71 GISPNNFK 78
GISP N++
Sbjct: 63 GISPENYE 70
>gi|391869867|gb|EIT79060.1| DNA mismatch repair protein [Aspergillus oryzae 3.042]
Length = 870
Score = 186 bits (472), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 96/236 (40%), Positives = 138/236 (58%), Gaps = 21/236 (8%)
Query: 597 ALAAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQ-------------DLFIVDQHA 643
+L A L K+DFG+M++ GQFNLGFI+ +LFI+DQHA
Sbjct: 641 SLETAEERLSLTVSKDDFGKMRIAGQFNLGFILATRSSTGVSDSAPPSSKDELFIIDQHA 700
Query: 644 ADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHA--L 701
+DEK+NFERL TV+ Q L++P +LDLT EE + + + KNGF +E D
Sbjct: 701 SDEKFNFERLQAETVVQNQRLVQPKQLDLTAVEEEIVIENQSALEKNGFVVEVDDSGNEP 760
Query: 702 AGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAML 761
G R +L ++P SK++ FGV D+++LI L++ + Y PS+VR M
Sbjct: 761 IGRRCKLVSLPLSKEVVFGVRDLEELIVLLSEMPASSTAGPMY------VPRPSKVRKMF 814
Query: 762 ASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKNI 817
A RACRSSIMIG L + +M +++ ++ ++ PWNCPHGRPTMRHL+ L +N+
Sbjct: 815 AMRACRSSIMIGKNLSQKQMTRVVRNMGTIDKPWNCPHGRPTMRHLMSLGQWNENV 870
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 72/201 (35%), Positives = 99/201 (49%), Gaps = 28/201 (13%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCL------- 136
L AYA ++KGVRF NT K VV T G+ + K+NI V+G L
Sbjct: 177 LLHAYACVSKGVRFNVKNTVAKTRNVVVFSTNGNQTTKENIANVYGAKTLLALIPLDLTL 236
Query: 137 --EPVAICK---------SDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKL 185
EP A K S+ V G +S+P G GR DRQ FFVN RP LP+++K
Sbjct: 237 EFEPSAAGKRAAVDEERESNKIFVRGHISRPVFGEGRQTPDRQMFFVNSRPCGLPQIAKA 296
Query: 186 VNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSP 245
NE+YK N Q P +F + T A DVNV+PDKR + D +++ +L+ L +++
Sbjct: 297 FNEVYKSFNVSQSPFVFADFHMDTNAYDVNVSPDKRTILLHDAGALIESLKTSLTQLFES 356
Query: 246 ----------NNASYSVNKVE 256
NNA S K++
Sbjct: 357 SDQTVPQSQVNNARQSTTKLQ 377
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 46/68 (67%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
TI VH+I +GQVI DL S KELVENSLDAGATSIE+ K G + +V DNG
Sbjct: 3 TIAYTTTRAVHQIQSGQVIVDLCSVAKELVENSLDAGATSIEVRFKNNGLDLIEVQDNGS 62
Query: 71 GISPNNFK 78
GISP N++
Sbjct: 63 GISPENYE 70
>gi|403214451|emb|CCK68952.1| hypothetical protein KNAG_0B05200 [Kazachstania naganishii CBS
8797]
Length = 873
Score = 186 bits (471), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 94/212 (44%), Positives = 131/212 (61%), Gaps = 21/212 (9%)
Query: 611 KEDFGRMKVIGQFNLGFII-------GKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQP 663
K++F +M ++GQFNLGFII GK D LFIVDQHA+DEKYNFE L ++T Q
Sbjct: 666 KQEFEKMMIVGQFNLGFIITRRVNPDGKFD--LFIVDQHASDEKYNFETLQRTTKFQSQQ 723
Query: 664 LLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVED 723
LL P ++L +E++ ++++ NGF L + G R +L + P+SK+ F ++D
Sbjct: 724 LLVPRVIELPFIDELIVMDNINVFESNGFKLSIEEDDATGQRIKLMSFPYSKQTVFDMDD 783
Query: 724 VKDLISTLADNQGE-CSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQ 782
+L+ + D G CS + C S+VRAM A RACRSSIMIG L + M
Sbjct: 784 FDELLQLIKDQNGSPCSHVR----------C-SKVRAMFAMRACRSSIMIGKPLTKTTMA 832
Query: 783 KILEHLADLNSPWNCPHGRPTMRHLVDLTTIR 814
++++HL L+ PWNCPHGRPTMRHL++LT R
Sbjct: 833 RVVKHLGTLDKPWNCPHGRPTMRHLLELTDWR 864
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/187 (35%), Positives = 97/187 (51%), Gaps = 23/187 (12%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFG---------M 130
+ + L Q+Y+LI + F N TG KS+VL T ++ N I VFG M
Sbjct: 171 KCISLLQSYSLIQDKINFSVWNITGTGKKSLVLSTSNKKTILKNCINVFGSSAVSGVAEM 230
Query: 131 NIYNCLEPVAI---CKSD-----------SCKVEGFLSKPGQGSGRNLGDRQYFFVNDRP 176
+I L P + K D + VEG++SK G GRN DRQ+ ++N RP
Sbjct: 231 SIIIELNPTHMRQQYKFDEESQTPEGINYTISVEGYISKSSFGCGRNSKDRQFLYINKRP 290
Query: 177 VDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALR 236
++ P++ K N++Y+ N+ QYP ++NF V TR D+NVTPDKR V +E ++ R
Sbjct: 291 IEYPQLLKNCNDVYRSFNNVQYPFILLNFQVDTRLIDINVTPDKRTVLLHNEQYVIDLFR 350
Query: 237 EGLQEIY 243
E L Y
Sbjct: 351 EHLLVYY 357
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 48/71 (67%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR + +H++ +GQVI DL++AVKELV+NS+DA ++ I+I K YG + F+ DNG G
Sbjct: 4 IRSLEGVDIHKLTSGQVIIDLTTAVKELVDNSIDAHSSQIDILFKNYGTDSFECSDNGDG 63
Query: 72 ISPNNFKVRAV 82
IS + A+
Sbjct: 64 ISTGDLDTLAL 74
>gi|403361297|gb|EJY80348.1| DNA mismatch repair enzyme (predicted ATPase) [Oxytricha trifallax]
Length = 984
Score = 186 bits (471), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 95/219 (43%), Positives = 140/219 (63%), Gaps = 11/219 (5%)
Query: 604 ELERLFRKEDFGRMKVIGQFNLGFIIGKLDQ-DLFIVDQHAADEKYNFERLSQSTVLNQQ 662
EL + F+K+DF ++V GQFN GFI+ L++ DLFI+DQHA DEKYNFE S++TV+ Q
Sbjct: 755 ELLKRFKKDDFKNLQVKGQFNSGFIMATLNEHDLFILDQHACDEKYNFENFSRTTVIESQ 814
Query: 663 PLLRPLKLDLTPEEEVVASMHMDIIRKNGFSL----EEDPHALAGLRFRLKAVPFSKKIT 718
L+ P+++DL+ + + MH D+ R NGF + EED L +K++PF KK T
Sbjct: 815 DLMHPIQVDLSVTDALAVKMHSDVFRMNGFKVVPKNEEDEMCNTYL---IKSLPFVKKAT 871
Query: 719 FGVEDVKDLISTLADN---QGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDA 775
F V+D +L++ ++ N E + + + + PS++ + LASRACR+SIM+G
Sbjct: 872 FSVDDFYELLNIVSANLDLDKEQTNRKEQSLLHKELLRPSKIYSNLASRACRTSIMVGTV 931
Query: 776 LGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIR 814
L M K++ +LA L SPWNCPHGRPTMR L +L ++
Sbjct: 932 LDNKTMNKVVNNLATLESPWNCPHGRPTMRLLKNLENLQ 970
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 88/266 (33%), Positives = 133/266 (50%), Gaps = 39/266 (14%)
Query: 1 MDVETPTNSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGE 60
M+ + + S I+ I+K + +IC+ QV+ DL SAVKELVENSLDAGA+SI+I YG
Sbjct: 1 MESQRSSTSGDIKKIDKTSILQICSSQVVIDLKSAVKELVENSLDAGASSIDIKFHNYGL 60
Query: 61 EWFQVVDNGCGISPNNFKVRA-------------VFLCQAYALIAKGVRFVCTNTTGKNV 107
F+V+D+G GI +F V A ++ ++ + + +C N+
Sbjct: 61 NGFEVIDDGHGIKEVDFDVIAKRGTTSKINEFEDIYAVKSLGFRGEALSSLC------NI 114
Query: 108 KSVVLKTQGSSSLKDNIITVFGMNI-YNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGD 166
+V ++T+ G I +N L V I K K E + P S + D
Sbjct: 115 SNVTIQTKRPDQNT-------GWQIRFNHLGDV-ISKEQMAKQER--NNPLIQSQGPIHD 164
Query: 167 RQ--------YFFVNDRPVDLP-KVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVT 217
+Q +F++N RP+D+P K L +E+Y+ N P+ MN V D+NV+
Sbjct: 165 KQNLIKHQQIFFYLNKRPIDIPRKFKNLFSEIYRQYNPSMNPMIFMNIEVEDNNYDINVS 224
Query: 218 PDKRKVFFSDECSILHALREGLQEIY 243
PDKR VF +E ++ ALR L E Y
Sbjct: 225 PDKRDVFLKNEDEVIEALRIKLTEFY 250
>gi|255718257|ref|XP_002555409.1| KLTH0G08624p [Lachancea thermotolerans]
gi|238936793|emb|CAR24972.1| KLTH0G08624p [Lachancea thermotolerans CBS 6340]
Length = 906
Score = 185 bits (470), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 90/206 (43%), Positives = 136/206 (66%), Gaps = 18/206 (8%)
Query: 611 KEDFGRMKVIGQFNLGFII------GKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPL 664
K DF +M+++GQFNLGFI+ GK D LFI+DQHA+DEKYNFE+L ++TV Q L
Sbjct: 701 KSDFKKMEIVGQFNLGFILVTRRKSGKFD--LFIIDQHASDEKYNFEKLQKNTVFKSQKL 758
Query: 665 LRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDV 724
L P ++++ +E+V ++++ KNGF LE D G R ++ ++P S+K F + D+
Sbjct: 759 LAPQIVEMSIIDELVMMDNLEVFEKNGFKLEIDEEQPQGCRVKVVSLPVSRKTLFDMNDL 818
Query: 725 KDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKI 784
+LI + ++ G + DS+ S++RAM A RACRSSIM+G L + M ++
Sbjct: 819 HELIHLVKESDGL----------SKDSIRCSKIRAMHAMRACRSSIMVGRPLVKKSMLRV 868
Query: 785 LEHLADLNSPWNCPHGRPTMRHLVDL 810
+ +L++L+ PWNCPHGRPTMRHL++L
Sbjct: 869 VRNLSELDKPWNCPHGRPTMRHLMEL 894
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 92/187 (49%), Gaps = 22/187 (11%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
+ + L QAY +I + ++ + TG +S+VL + + II VFG + L +
Sbjct: 172 KCIMLLQAYTIIQERMKISVWHITGNGRRSLVLSSTKDRGIPKRIIGVFGSSAMQGLSDI 231
Query: 140 AICKSDSCK----------------------VEGFLSKPGQGSGRNLGDRQYFFVNDRPV 177
+ S K V G++S+ G GR DRQ+ ++N RPV
Sbjct: 232 HLTLQISPKRSFSSQLSGAEVSSGSPEYIIVVSGYISRNTFGCGRTAKDRQFIYINQRPV 291
Query: 178 DLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALRE 237
P ++K NE+Y+ N+ QYP+ ++NF + DVNVTPDKR V E S++ A RE
Sbjct: 292 IYPSLAKSCNEVYRTHNNVQYPVFVLNFELSPEFIDVNVTPDKRTVLLHAESSVIDAFRE 351
Query: 238 GLQEIYS 244
L + YS
Sbjct: 352 ALADYYS 358
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 48/74 (64%)
Query: 9 SPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDN 68
S I IN VHRI +GQVI DL+SAVKEL++NS+D+GA + K YG E + DN
Sbjct: 2 SSKIAAINDADVHRITSGQVIIDLASAVKELLDNSIDSGADQVVCTFKNYGLESLECSDN 61
Query: 69 GCGISPNNFKVRAV 82
G G+ ++++ A+
Sbjct: 62 GSGVPEDSYESLAL 75
>gi|410083405|ref|XP_003959280.1| hypothetical protein KAFR_0J00770 [Kazachstania africana CBS 2517]
gi|372465871|emb|CCF60145.1| hypothetical protein KAFR_0J00770 [Kazachstania africana CBS 2517]
Length = 811
Score = 185 bits (469), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 90/207 (43%), Positives = 132/207 (63%), Gaps = 13/207 (6%)
Query: 609 FRKEDFGRMKVIGQFNLGFII----GKLDQ-DLFIVDQHAADEKYNFERLSQSTVLNQQP 663
F KEDF +++VIGQFNLGFI+ +++ D+FI+DQHA+DEK+NFE+L++ VL Q
Sbjct: 599 FSKEDFNKLEVIGQFNLGFIVTLKKSSMNKYDMFIIDQHASDEKFNFEKLNKELVLKTQK 658
Query: 664 LLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVED 723
L+ P+KL+L +E++ + D+ KNGF +E + G + +L ++P K +TF VED
Sbjct: 659 LIVPIKLELNIVDELIVIENADMFNKNGFKIEINDDNEPGKKVQLLSIPIYKNLTFNVED 718
Query: 724 VKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQK 783
+L+ L + G + D S+ +MLA +ACRSSIMIG L M +
Sbjct: 719 FHELVDILKEKNGTS--------NEDDIKLCSKTYSMLAMKACRSSIMIGKPLTHKTMTR 770
Query: 784 ILEHLADLNSPWNCPHGRPTMRHLVDL 810
++++L L PWNCPHGRPTMRHLV+L
Sbjct: 771 VVKNLNKLQKPWNCPHGRPTMRHLVEL 797
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/189 (33%), Positives = 96/189 (50%), Gaps = 25/189 (13%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVK-SVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAIC 142
L Q+Y++I + + F N KN K S++L T S +L I+ FG++ CL P+ I
Sbjct: 176 LIQSYSIIQENISFKIFNINTKNQKKSLILSTIKSDNLFKKILNCFGLSCTKCLVPLKIS 235
Query: 143 ------KSDSCKVE--------------GFLSKPGQ-GSGRNLGDRQYFFVNDRPVDLPK 181
KS K E G++SK S RNL DRQ+F++N RPV P
Sbjct: 236 LDLNSYKSQFSKTEDDFYESIDYKIELGGYISKINDSNSTRNLKDRQFFYLNKRPVVYPS 295
Query: 182 VSKLVNELYKG---ANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREG 238
+ KL+ E++K S +YP+ +N V D+N+TPDKR + S+E I+ L+
Sbjct: 296 IQKLITEIFKLNHIGQSNKYPMFFLNLNVNESLIDINITPDKRTIMLSNEDVIMGLLKHE 355
Query: 239 LQEIYSPNN 247
L + + +N
Sbjct: 356 LNKFFQIDN 364
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 49/67 (73%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
+R I + ++ I + QVI DL++ +KEL++NS+DAG+ SIEI LK+YG E + +DNG G
Sbjct: 2 LRHITQDDINLITSSQVIIDLATIIKELIDNSIDAGSNSIEIILKDYGVESIEFMDNGSG 61
Query: 72 ISPNNFK 78
IS NF+
Sbjct: 62 ISQENFE 68
>gi|134109737|ref|XP_776418.1| hypothetical protein CNBC4730 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259094|gb|EAL21771.1| hypothetical protein CNBC4730 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1018
Score = 185 bits (469), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 106/275 (38%), Positives = 151/275 (54%), Gaps = 26/275 (9%)
Query: 544 LQFSIQDLRKRRQQRLSIMQSSCHTSGSVKMRRCFAAATLELSQPENEERKARALAAATT 603
++F + LRKR + +G+ R +L + + K LA T
Sbjct: 739 MRFDLSRLRKR------FANAGNRQAGAQSKRVSQLVKQGDLEEAAGIKNKDSELAEET- 791
Query: 604 ELERLFRKEDFGRMKVIGQFNLGFIIGKLDQ------DLFIVDQHAADEKYNFERLSQST 657
L R+ K DF +M+V GQFN GFII +L DLFI+DQHA+DEKYNFE L Q+T
Sbjct: 792 -LSRVISKADFEKMEVKGQFNKGFIIARLQSTDNGTDDLFIIDQHASDEKYNFETLQQTT 850
Query: 658 VLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSL--EEDPHALAGLRFRLKAVPFSK 715
+ Q L++P L LT +E+VA ++DI+ NGF + +E A G R L A+P SK
Sbjct: 851 KIKAQALIKPRALHLTAGDEIVAMENIDILNANGFDVHVDESKPAGKGERISLLAMPVSK 910
Query: 716 KITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDA 775
+ F +D++ L+ L+D+ + V + RAM ASRACR S+MIG
Sbjct: 911 ETVFDFKDLEQLLHLLSDD----------SRPSGQMVRCMKARAMFASRACRKSVMIGKT 960
Query: 776 LGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
L + +M ++L ++ ++ PWNCPHGRPTMRHL L
Sbjct: 961 LTKGQMSQLLRNMGTIDQPWNCPHGRPTMRHLTKL 995
Score = 112 bits (281), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 111/210 (52%), Gaps = 29/210 (13%)
Query: 80 RAVFLCQAYALIA---------KGVRFVCTNTTG---KNVKSVVLKTQGSSSLKDNIITV 127
+A+ L AYAL+ GVR T G + +S+ L T G L+ ++ V
Sbjct: 176 KALVLLTAYALVPASASVQDARNGVRLKVELTAGGGRASKRSIHLMTDGRGQLRSSVGAV 235
Query: 128 FGMNIYNCLEPVAIC-----------------KSDSCKVEGFLSKPGQGSGRNLGDRQYF 170
+G + + +E + + ++ + +V+G +S G G + RQ+F
Sbjct: 236 WGPSALDNVEDINLRLEVEIDRVMARREGITERTQTVEVKGLISSAQWGCGFSTSSRQFF 295
Query: 171 FVNDRPVDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECS 230
++N RP +L KV++ +NE+YK N+ Q P+AI++F +PT + D+NV+PDKR +F E
Sbjct: 296 YINGRPCNLTKVARAINEVYKSFNTNQLPLAILDFKIPTESVDINVSPDKRTIFVHSEDC 355
Query: 231 ILHALREGLQEIYSPNNASYSVNKVEQLIE 260
++ +L+ L+ ++P+ +++V + I+
Sbjct: 356 LIDSLKTALESFFAPSRNTFTVEGASRTIK 385
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 53/67 (79%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ I+ ++HRI +GQV+ DL SA+KEL+ENSLDAGAT+I++ +K+ G + +VVDNG G
Sbjct: 5 IKAIDTSLIHRIHSGQVVLDLQSAIKELLENSLDAGATAIDVRIKDNGLDSIEVVDNGSG 64
Query: 72 ISPNNFK 78
I+ +++
Sbjct: 65 IAEADWE 71
>gi|58264774|ref|XP_569543.1| ATPase [Cryptococcus neoformans var. neoformans JEC21]
gi|57225775|gb|AAW42236.1| ATPase, putative [Cryptococcus neoformans var. neoformans JEC21]
Length = 939
Score = 185 bits (469), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 106/275 (38%), Positives = 151/275 (54%), Gaps = 26/275 (9%)
Query: 544 LQFSIQDLRKRRQQRLSIMQSSCHTSGSVKMRRCFAAATLELSQPENEERKARALAAATT 603
++F + LRKR + +G+ R +L + + K LA T
Sbjct: 660 MRFDLSRLRKR------FANAGNRQAGAQSKRVSQLVKQGDLEEAAGIKNKDSELAEET- 712
Query: 604 ELERLFRKEDFGRMKVIGQFNLGFIIGKLDQ------DLFIVDQHAADEKYNFERLSQST 657
L R+ K DF +M+V GQFN GFII +L DLFI+DQHA+DEKYNFE L Q+T
Sbjct: 713 -LSRVISKADFEKMEVKGQFNKGFIIARLQSTDNGTDDLFIIDQHASDEKYNFETLQQTT 771
Query: 658 VLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSL--EEDPHALAGLRFRLKAVPFSK 715
+ Q L++P L LT +E+VA ++DI+ NGF + +E A G R L A+P SK
Sbjct: 772 KIKAQALIKPRALHLTAGDEIVAMENIDILNANGFDVHVDESKPAGKGERISLLAMPVSK 831
Query: 716 KITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDA 775
+ F +D++ L+ L+D+ + V + RAM ASRACR S+MIG
Sbjct: 832 ETVFDFKDLEQLLHLLSDDS----------RPSGQMVRCMKARAMFASRACRKSVMIGKT 881
Query: 776 LGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
L + +M ++L ++ ++ PWNCPHGRPTMRHL L
Sbjct: 882 LTKGQMSQLLRNMGTIDQPWNCPHGRPTMRHLTKL 916
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 97/186 (52%), Gaps = 29/186 (15%)
Query: 80 RAVFLCQAYALIA---------KGVRFVCTNTTG---KNVKSVVLKTQGSSSLKDNIITV 127
+A+ L AYAL+ GVR T G + +S+ L T G L+ ++ V
Sbjct: 176 KALVLLTAYALVPASASVQDARNGVRLKVELTAGGGRASKRSIHLMTDGRGQLRSSVGAV 235
Query: 128 FGMNIYNCLEPVAIC-----------------KSDSCKVEGFLSKPGQGSGRNLGDRQYF 170
+G + + +E + + + + +V+G +S G G + RQ+F
Sbjct: 236 WGPSALDNVEDINLRLEVEIDRVMARREGITERKQTVEVKGLISSAQWGCGFSTSSRQFF 295
Query: 171 FVNDRPVDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECS 230
++N RP +L KV++ +NE+YK N+ Q P+AI++F +PT + D+NV+PDKR +F E
Sbjct: 296 YINGRPCNLTKVARAINEVYKSFNTNQLPLAILDFKIPTESVDINVSPDKRTIFVHSEDC 355
Query: 231 ILHALR 236
++ +L+
Sbjct: 356 LIDSLK 361
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 53/67 (79%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ I+ ++HRI +GQV+ DL SA+KEL+ENSLDAGAT+I++ +K+ G + +VVDNG G
Sbjct: 5 IKAIDTSLIHRIHSGQVVLDLQSAIKELLENSLDAGATAIDVRIKDNGLDSIEVVDNGSG 64
Query: 72 ISPNNFK 78
I+ +++
Sbjct: 65 IAEADWE 71
>gi|295675041|ref|XP_002798066.1| DNA mismatch repair protein pms1 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226280716|gb|EEH36282.1| DNA mismatch repair protein pms1 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1067
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 100/233 (42%), Positives = 137/233 (58%), Gaps = 25/233 (10%)
Query: 603 TELERLFRKEDFGRMKVIGQFNLGFIIGKL---------------DQDLFIVDQHAADEK 647
T L KEDF +M++IGQFNLGFII D +LFI+DQHA+DEK
Sbjct: 793 TRLSLSVSKEDFAKMRIIGQFNLGFIIATRFRGDPNDSTATIDHKDDELFIIDQHASDEK 852
Query: 648 YNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHA--LAGLR 705
YNFERL TV+ Q L++P LDLT EE + ++ + KNGF +E D G R
Sbjct: 853 YNFERLQAETVVQNQRLVKPKTLDLTAVEEEIIIDNLPALEKNGFIVEVDRSGDEPIGRR 912
Query: 706 FRLKAVPFSKKITFGVEDVKDLISTLADN-QGECSIISSYKMDTADSVC-------PSRV 757
+L ++P SK++ F + D+++LI L ++ Q + + S + S PS+V
Sbjct: 913 CKLTSLPLSKEVVFNIRDLEELIVLLGESPQAQSARSPSSFSTLSSSPLTSKYVPRPSKV 972
Query: 758 RAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
R M A RACRSSIMIG +L +M K++ H+ ++ PWNCPHGRPTMRHL+ L
Sbjct: 973 RKMFAMRACRSSIMIGKSLTAKQMGKVVRHMGMIDKPWNCPHGRPTMRHLMSL 1025
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 97/184 (52%), Gaps = 22/184 (11%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTT--GKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLE 137
+ + L AYA ++ GVRF N GKNV +V T+ +++ K+NI ++G L
Sbjct: 173 KVLGLLHAYACVSTGVRFNVKNQMLKGKNV--LVFATKSNATTKENISNIYGAKTLLALT 230
Query: 138 PV------------------AICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDL 179
P+ I +++ ++G +SKP G GR DRQ FFVN RP L
Sbjct: 231 PLDLELEFQPSATNGKSIRGGIQEANKIFIQGHISKPIFGEGRQTPDRQMFFVNSRPCGL 290
Query: 180 PKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGL 239
P+++K NE+YK N Q P +F + T + DVNV+PDKR + D +++ +L+ L
Sbjct: 291 PQIAKAFNEVYKSFNISQSPFIFADFKMDTNSYDVNVSPDKRTILLHDAGTLIESLKTTL 350
Query: 240 QEIY 243
E++
Sbjct: 351 TELF 354
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 52/72 (72%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
TI+ I VH+I +GQVI DL S VKELVENSLDAGATSI+I K G + +V DNG
Sbjct: 3 TIKAIEARSVHQIQSGQVIVDLCSVVKELVENSLDAGATSIDIRFKNNGLDLIEVQDNGK 62
Query: 71 GISPNNFKVRAV 82
GISP++++ A+
Sbjct: 63 GISPDDYETVAL 74
>gi|322707643|gb|EFY99221.1| putative DNA mismatch repair protein PMS1 [Metarhizium anisopliae
ARSEF 23]
Length = 1106
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 101/241 (41%), Positives = 142/241 (58%), Gaps = 26/241 (10%)
Query: 591 EERKARALAA-ATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQ-------------DL 636
EER A A+ A ++L + K+DF +M+V+GQFNLGFII + +L
Sbjct: 832 EERVADITASDAESKLPLIIAKDDFSKMRVVGQFNLGFIIAVRPKSHRHTCHEADDADEL 891
Query: 637 FIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEE 696
FI+DQHA+DEK+NFERL +TV+ Q L+ P L LT EE + ++ + NGF ++
Sbjct: 892 FIIDQHASDEKFNFERLQVNTVIQSQRLVYPKALQLTALEEEIVLGNLPALEANGFKIQV 951
Query: 697 DPHALA--GLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCP 754
D + G R +L A+P S+++TF + D+++LI+ LA+ I P
Sbjct: 952 DSTGGSPVGARCQLLALPLSREVTFTLNDLEELITLLAEESSGSRHIPR----------P 1001
Query: 755 SRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIR 814
SRVR M A RACRSSIMIG L ++M ++ H+ +L+ PWNCPHGRPTMRHL L
Sbjct: 1002 SRVRKMFAMRACRSSIMIGKPLTTSQMYSLVRHMGELDKPWNCPHGRPTMRHLCSLLAWD 1061
Query: 815 K 815
K
Sbjct: 1062 K 1062
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 16/165 (9%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
+ + L YA + ++F + K + ++ T+ + + ++NII +FG + L +
Sbjct: 246 KVIALLNQYACVQTNLKFSVSQQPTKGKRIILFSTKSNPTTRENIINIFGSKAMSTLVSL 305
Query: 140 AIC----------------KSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVS 183
+ +S ++ G +S+P G GR DRQ FFVN RP LP+ +
Sbjct: 306 DLLLEMHPSNVGPDLRTDQESKQVRILGHVSRPVHGDGRQAPDRQMFFVNGRPCGLPQFA 365
Query: 184 KLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDE 228
K NE+YK N Q P + + T+ DVNV+PDKR + D+
Sbjct: 366 KTFNEVYKAYNISQSPFIFADVQLDTKMYDVNVSPDKRSILLHDQ 410
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 38/53 (71%)
Query: 25 AGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNF 77
+GQVI DL S VKELVENS+DAGAT I++ K G + +V DNG GI P N+
Sbjct: 90 SGQVIVDLCSVVKELVENSIDAGATIIDVRFKNQGLDLIEVQDNGSGICPANY 142
>gi|322694251|gb|EFY86086.1| putative DNA mismatch repair protein PMS1 [Metarhizium acridum CQMa
102]
Length = 791
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 98/230 (42%), Positives = 136/230 (59%), Gaps = 25/230 (10%)
Query: 601 ATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQ-------------DLFIVDQHAADEK 647
A ++L + K+DF +M+V+GQFNLGFII + +LFI+DQHA+DEK
Sbjct: 549 AESKLPLIIAKDDFSKMRVVGQFNLGFIIAVRPKSHRHTCREADDVDELFIIDQHASDEK 608
Query: 648 YNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALA--GLR 705
+NFERL +TV+ Q L+ P L LT EE + ++ + NGF ++ D + G R
Sbjct: 609 FNFERLQANTVIQSQRLVYPKSLQLTALEEEIVLENLPALEANGFKIQVDSTGGSPVGAR 668
Query: 706 FRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRA 765
+L A+P S+++TF + D+++LI+ LA+ I PSRVR M A RA
Sbjct: 669 CQLLALPLSREVTFTLNDLEELIALLAEESSGSRHIPR----------PSRVRKMFAMRA 718
Query: 766 CRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRK 815
CRSSIMIG L N+M +L H+ +L+ PWNCPHGRPTMRHL L K
Sbjct: 719 CRSSIMIGKPLTANQMYLLLRHMGELDKPWNCPHGRPTMRHLCSLLAWDK 768
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 50/86 (58%)
Query: 143 KSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQYPIAI 202
+S +V G +S+P QG GR DRQ FFVN RP LP+ +K NE+YK N Q P
Sbjct: 31 ESKQVRVLGHVSRPVQGDGRQAPDRQMFFVNGRPCGLPQFAKTFNEVYKAYNISQSPFIF 90
Query: 203 MNFIVPTRACDVNVTPDKRKVFFSDE 228
N + T DVNV+PDKR + D+
Sbjct: 91 ANVQLDTNMYDVNVSPDKRSILLHDQ 116
>gi|198419514|ref|XP_002120346.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
Length = 803
Score = 184 bits (468), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 97/242 (40%), Positives = 141/242 (58%), Gaps = 21/242 (8%)
Query: 581 ATLELSQPENEERKARALAAATT----ELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDL 636
+ +E SQP E RA A TT EL + K F +M +GQFNLGF+IG+ DL
Sbjct: 576 SNIEPSQPPTEYSLFRANLADTTTAEAELTKNLDKSSFQQMAPVGQFNLGFVIGRHGNDL 635
Query: 637 FIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLE- 695
FI+DQHA+DE YN+E L + L Q L+ PLKL LTP ++V +++I RKNGF +
Sbjct: 636 FIIDQHASDEIYNYETLQATQTLQTQNLVVPLKLQLTPAGKIVLIENLEIFRKNGFGFKI 695
Query: 696 -EDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVC- 753
D + R ++ +P G D+ ++I L+D G +C
Sbjct: 696 SSDEGKMLFDRRQVSYIPTHNPHPLGPPDIDEMIFMLSDAPG--------------VMCR 741
Query: 754 PSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTI 813
P+RVR + A+RACR S MIG +L + +M +++ H++++ PWNCPHGRPTMRHL+D+ +
Sbjct: 742 PTRVRRIFATRACRMSTMIGTSLTKRQMLRLIRHMSEIVHPWNCPHGRPTMRHLIDIGKL 801
Query: 814 RK 815
R+
Sbjct: 802 RQ 803
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 65/177 (36%), Positives = 100/177 (56%), Gaps = 16/177 (9%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVA--I 141
L AY +++ V+ C+N T K+ L T G++++++NII++FG + L+ I
Sbjct: 176 LVSAYCVVSTRVKITCSNETDGGKKTTSLSTGGATTMEENIISIFGSKQFRNLQEFRQDI 235
Query: 142 CKSDSC--------------KVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVN 187
+SC K+ GF+S P G+GR+ DRQ+FFVN RP+ LP++SK+VN
Sbjct: 236 PTQESCDTYNVSVASDWSIFKLHGFVSVPRHGAGRSSPDRQFFFVNSRPITLPRLSKIVN 295
Query: 188 ELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYS 244
E+Y N Q+P +N DVNVTPDKRKVFF +E + + + ++YS
Sbjct: 296 EVYHRFNRHQFPFIAINITTRHDLVDVNVTPDKRKVFFQNENLLFAIMTSSMTQLYS 352
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 50/66 (75%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I I+K VH+IC+GQVI DL +AVKELVENSLDAGAT++EI LK +G +V+D+G G
Sbjct: 4 IEAIDKKSVHQICSGQVIVDLPTAVKELVENSLDAGATNVEIRLKSFGLLSIEVIDDGHG 63
Query: 72 ISPNNF 77
+ NF
Sbjct: 64 VEERNF 69
>gi|395328077|gb|EJF60472.1| hypothetical protein DICSQDRAFT_63095 [Dichomitus squalens LYAD-421
SS1]
Length = 342
Score = 184 bits (467), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 98/227 (43%), Positives = 132/227 (58%), Gaps = 26/227 (11%)
Query: 601 ATTELERLFRKEDFGRMKVIGQFNLGFII-------GKLD-------QDLFIVDQHAADE 646
A L R+ K DF M+ +GQFNLGFII G+ D DLF+VDQHAADE
Sbjct: 103 AVEALSRVIDKPDFASMEAVGQFNLGFIIVRRRKQGGEGDGVDDVEMDDLFVVDQHAADE 162
Query: 647 KYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRF 706
KYNFE L Q+T + Q L+ P L+LT +EVVA ++DI+R+NGF L+ AG R
Sbjct: 163 KYNFETLQQTTKIKSQQLISPEVLELTAADEVVALENIDILRQNGFELDIAEDRPAGQRV 222
Query: 707 RLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRAC 766
+ A P S F +D+++L++ + D V S+ RAM A RAC
Sbjct: 223 LMTAHPVSGSTKFDAKDLEELLNLMQDRPA------------GQMVRCSKARAMFAMRAC 270
Query: 767 RSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTI 813
R SIMIG AL + +M +++H+ ++ PW+CPHGRPTMRHL DL +
Sbjct: 271 RKSIMIGTALNKRQMTSVVQHMGTMDQPWHCPHGRPTMRHLSDLVGV 317
>gi|261199400|ref|XP_002626101.1| DNA mismatch repair protein Pms1 [Ajellomyces dermatitidis SLH14081]
gi|239594309|gb|EEQ76890.1| DNA mismatch repair protein Pms1 [Ajellomyces dermatitidis SLH14081]
Length = 1065
Score = 184 bits (467), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/240 (41%), Positives = 138/240 (57%), Gaps = 31/240 (12%)
Query: 598 LAAATTELERLFRKEDFGRMKVIGQFNLGFII---------------GKLDQDLFIVDQH 642
L +A T+L KEDF +M++IGQFNLGFII G ++FI+DQH
Sbjct: 788 LESAETQLSLSVSKEDFAKMRIIGQFNLGFIIATRPRGDSNNPSTLPGHKHDEVFIIDQH 847
Query: 643 AADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEED--PHA 700
A+DEKYNFERL TV+ Q L++P L+LT EE + ++ + KNGF +E D +
Sbjct: 848 ASDEKYNFERLQAETVVQNQRLVKPKTLELTAVEEEIIIDNLPALEKNGFVVEVDRSGNE 907
Query: 701 LAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVC------- 753
G R +L ++P SK++ F D+++LI L GE I + + S
Sbjct: 908 PIGRRCKLTSLPLSKEVVFNTGDLEELIVLL----GEAPQIQTQSAPSPTSGSDVFAGKY 963
Query: 754 ---PSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
PS+VR M A RACRSSIMIG L +M +++ H+ ++ PWNCPHGRPTMRHL+ L
Sbjct: 964 IPRPSKVRKMFAMRACRSSIMIGKTLTTKQMDRVVRHMGMIDRPWNCPHGRPTMRHLMSL 1023
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 94/182 (51%), Gaps = 18/182 (9%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
+ + L AYA ++ GVRF N K +V TQ +++ K+NI ++G L P+
Sbjct: 173 KVLGLLHAYACVSTGVRFNVKNQMPKGKSVLVFATQSNATTKENISNIYGAKTLLSLTPL 232
Query: 140 AI-----------C-------KSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPK 181
+ C + + V+G +SKP G GR DRQ FFVN RP LP+
Sbjct: 233 DLELEFQPSGTGRCLIGGGSNEGNKILVQGHISKPVFGEGRQTPDRQMFFVNSRPCALPQ 292
Query: 182 VSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQE 241
++K NE+YK N Q P +F + T + DVNV+PDKR + D +++ +L+ L E
Sbjct: 293 IAKAFNEVYKSFNISQSPFIFADFKMDTNSYDVNVSPDKRTILLHDAGALIESLKTSLTE 352
Query: 242 IY 243
++
Sbjct: 353 LF 354
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 52/72 (72%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
TI+ I VH+I +GQVI DL S VKELVENSLDAGATS++I K G + +V DNG
Sbjct: 3 TIKAIEARSVHQIQSGQVIVDLCSVVKELVENSLDAGATSLDIRFKNNGLDLIEVQDNGK 62
Query: 71 GISPNNFKVRAV 82
GISP++++ A+
Sbjct: 63 GISPDDYETVAL 74
>gi|169606051|ref|XP_001796446.1| hypothetical protein SNOG_06058 [Phaeosphaeria nodorum SN15]
gi|160706903|gb|EAT87122.2| hypothetical protein SNOG_06058 [Phaeosphaeria nodorum SN15]
Length = 1051
Score = 184 bits (467), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 94/209 (44%), Positives = 131/209 (62%), Gaps = 14/209 (6%)
Query: 611 KEDFGRMKVIGQFNLGFIIG-------KLDQDLFIVDQHAADEKYNFERLSQSTVLNQQP 663
K DF M++IGQFNLGFII DLFI+DQHA+DEKYNFERLS +T L Q
Sbjct: 805 KPDFNEMRIIGQFNLGFIIAVRPPTTTSPTSDLFIIDQHASDEKYNFERLSATTTLVSQR 864
Query: 664 LLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDP--HALAGLRFRLKAVPFSKKITFGV 721
L+ P L+LT EE + + + NGF +E D +G R +L ++P SK++TF
Sbjct: 865 LVHPHPLELTAVEEEIILANEHALTANGFVVEMDTADDLDSGHRAKLISLPMSKEVTFTP 924
Query: 722 EDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEM 781
D+++L++ + DN ++ +S + PS+VR +LASRACRSS+MIG L M
Sbjct: 925 TDLEELLALILDNPPSSTMATSTHIPR-----PSKVRKLLASRACRSSVMIGKTLKTARM 979
Query: 782 QKILEHLADLNSPWNCPHGRPTMRHLVDL 810
++I+ H+ ++ PW+CPHGRPTMRHL L
Sbjct: 980 REIVRHMGSMDKPWSCPHGRPTMRHLFGL 1008
Score = 112 bits (280), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 97/190 (51%), Gaps = 26/190 (13%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAI-- 141
L AYA I+ GV+F T T K++ T ++S +DNI V+G + L P+ +
Sbjct: 189 LLNAYACISVGVKF--TRLTDSRKKTIAFSTNSNASTRDNISNVYGAKTISALIPLNLEF 246
Query: 142 ----------------------CKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDL 179
S + K+ G +S+P G GR DRQ FFVN RP +L
Sbjct: 247 EMDASNRPGSTQTARNWSTQEDPGSRTVKLVGHISRPVVGEGRLTPDRQMFFVNSRPCNL 306
Query: 180 PKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGL 239
P+V+K +NE+YK N Q P + + T A DVNV+PDKR + D+ +L +L+E L
Sbjct: 307 PQVAKAINEVYKSYNITQSPFIFADIQLDTNAYDVNVSPDKRTIMLHDQVVLLESLKEAL 366
Query: 240 QEIYSPNNAS 249
+++ ++ S
Sbjct: 367 LDLFEGHDQS 376
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 52/84 (61%), Gaps = 12/84 (14%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSI------------EIALKEY 58
+I+PI VH+I +GQVI DL S KELVENS+DAGAT++ E+ K
Sbjct: 3 SIKPIEGRSVHQIQSGQVIVDLQSVCKELVENSIDAGATTVGVVGGRRLTCDAEVRFKNN 62
Query: 59 GEEWFQVVDNGCGISPNNFKVRAV 82
G + +V DNG GISP++++ A+
Sbjct: 63 GLDAIEVQDNGGGISPDDYETIAL 86
>gi|294654739|ref|XP_002770025.1| DEHA2A10868p [Debaryomyces hansenii CBS767]
gi|199429111|emb|CAR65402.1| DEHA2A10868p [Debaryomyces hansenii CBS767]
Length = 959
Score = 184 bits (467), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 88/212 (41%), Positives = 134/212 (63%), Gaps = 12/212 (5%)
Query: 601 ATTELERLFRKEDFGRMKVIGQFNLGFIIGKLD--QDLFIVDQHAADEKYNFERLSQSTV 658
A +L K DF M++IGQFNLGFI+ L+ +LFI+DQHA+DEKYNFE+L++ T
Sbjct: 746 AEEKLSYTISKSDFLEMRLIGQFNLGFILVTLNSSNNLFIIDQHASDEKYNFEKLTEITT 805
Query: 659 LNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKIT 718
Q L+ P ++L +E++ ++ + ++NGF ++ + G R +L ++P SK +
Sbjct: 806 FQNQTLVIPKTIELNAIDEMIVMDNLSVFKQNGFVIQVEEDNPPGKRIKLISLPVSKNVL 865
Query: 719 FGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGR 778
F + D +LI +I+++ + + + S++R++LA RACRSSIMIG L R
Sbjct: 866 FDISDFHELIH----------LINTHNSTSNEGIKCSKIRSLLAMRACRSSIMIGQHLNR 915
Query: 779 NEMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
M KIL +L+ L+ PWNCPHGRPTMRHL +L
Sbjct: 916 KTMTKILTNLSKLDKPWNCPHGRPTMRHLTEL 947
Score = 108 bits (269), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 104/213 (48%), Gaps = 22/213 (10%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVL---KTQGSSSLKDNIITVFGMNIYNCL 136
+AV L Y +I +RF N K K ++ K GSS++ DN++ +FG N L
Sbjct: 173 KAVSLLINYIIINPNIRFTVYNINPKTSKKNLIIGTKGTGSSTILDNVVNIFGSNGAYGL 232
Query: 137 EPVAICKSD------------------SCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVD 178
P+ + D + + +G++S G GR+ GDRQY F+N RP+
Sbjct: 233 IPIDLSVDDIDVKFRLNRGDFPTHKKLNVQFKGYISNSSFGLGRSSGDRQYLFINGRPII 292
Query: 179 LPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREG 238
K K +NE+YK N Q+P+ I+N I+ T D+NVTPDKR + +E I LR
Sbjct: 293 FKKFLKTINEVYKSFNHVQFPVVILNVIIDTEFLDINVTPDKRVIMIQNEDLINDILRNE 352
Query: 239 LQEIYSPNNASYSVNKVEQL-IEPEKSGPSSGA 270
+ + + N NK + + EKS SS +
Sbjct: 353 VTKFFDTQNTVIPKNKSSGISLSDEKSSVSSNS 385
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 34/48 (70%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYG 59
I+ IN G + RI +GQVI DL S VKELVENS+DA ++ IE+ K G
Sbjct: 3 IQNINAGDIQRITSGQVIIDLVSIVKELVENSIDASSSKIEVLFKNSG 50
>gi|134056274|emb|CAK96402.1| unnamed protein product [Aspergillus niger]
Length = 869
Score = 184 bits (467), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/237 (40%), Positives = 142/237 (59%), Gaps = 20/237 (8%)
Query: 589 ENEERKARALAAATTELERLFRKEDFGRMKVIGQFNLGFIIG------------KLDQDL 636
++E+ A A L K+DF M+++GQFNLGFI+ +L
Sbjct: 595 QSEDETAAPQETAEERLSLTVSKDDFANMRIVGQFNLGFILATRSSTDDSGPGSSAKDEL 654
Query: 637 FIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEE 696
FI+DQHA+DEK+NFERL TV+ Q L++P +LDLT EE + + + KNGF +E
Sbjct: 655 FIIDQHASDEKFNFERLQAETVVQNQRLVQPKRLDLTAVEEEIVIENQAALEKNGFIVEV 714
Query: 697 DPHA--LAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVC- 753
D G R +L ++P SK++ FGV D+++LI L++ + ++ + T +
Sbjct: 715 DESGDEPIGRRCKLVSLPLSKEVVFGVRDLEELIVLLSE-----TPTNAARSATGMYIPR 769
Query: 754 PSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
PS+VR M A RACRSSIMIG L +MQK+++++ ++ PWNCPHGRPTMRHL+ L
Sbjct: 770 PSKVRKMFAMRACRSSIMIGKTLTVKQMQKVVQNMGTIDKPWNCPHGRPTMRHLMSL 826
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 92/177 (51%), Gaps = 17/177 (9%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAIC- 142
L AYA ++ GVRF N+ GK VV T G+ + K+NI V+G L P+ +
Sbjct: 179 LLHAYACVSTGVRFSVRNSVGKTKNVVVFSTNGNQTTKENIANVYGAKTLLALIPLDLAL 238
Query: 143 ----------------KSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLV 186
+ + V G +SKP G GR DRQ FFVN RP LP+++K
Sbjct: 239 EFEPSAAAGRRITGSGELNKLTVRGHVSKPVFGEGRQTPDRQMFFVNSRPCGLPQIAKAF 298
Query: 187 NELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIY 243
NE+YK N Q P +F + T A DVNV+PDKR + D +++ +L+E L +++
Sbjct: 299 NEVYKSFNVSQSPFVFADFHMDTNAYDVNVSPDKRTILLHDAGALIDSLKESLVQLF 355
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/58 (63%), Positives = 44/58 (75%)
Query: 20 VHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNF 77
+H+I +GQVI DL S KELVENSLDAGATSIEI K G + +V DNG GISP+N+
Sbjct: 14 IHQIQSGQVIVDLCSVAKELVENSLDAGATSIEIRFKNNGLDLIEVQDNGSGISPDNY 71
>gi|395852921|ref|XP_003804142.1| PREDICTED: LOW QUALITY PROTEIN: mismatch repair endonuclease PMS2
[Otolemur garnettii]
Length = 1037
Score = 184 bits (467), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/218 (44%), Positives = 132/218 (60%), Gaps = 20/218 (9%)
Query: 600 AATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVL 659
AA EL + K F M++IGQFNLGFII KL++D+FIVDQHA DEKYNFE L Q T+L
Sbjct: 839 AAEDELRKEISKTMFAEMEIIGQFNLGFIITKLNEDIFIVDQHATDEKYNFEMLQQHTIL 898
Query: 660 NQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITF 719
Q L+ + +T ++ + +N L A R +L ++P SK TF
Sbjct: 899 QGQRLIAXATIYITSIIQMKCISQIMDFSQNSILL-----APVTERAKLISLPTSKNWTF 953
Query: 720 GVEDVKDLISTLADNQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGR 778
G +D+ +LI L+D+ G +C PSRVR M ASRACR S+MIG AL
Sbjct: 954 GPQDIDELIFMLSDSPG--------------VMCRPSRVRQMFASRACRKSVMIGTALNT 999
Query: 779 NEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKN 816
+EM+K++ H+ +++ PWNCPHGRPTMRH+ +L I +N
Sbjct: 1000 SEMKKLITHMGEMDHPWNCPHGRPTMRHIANLDVISQN 1037
Score = 129 bits (323), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 100/177 (56%), Gaps = 17/177 (9%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP- 138
+ V + AY +I+ G+R CTN G+ + V+ T GSSS+K+NI +VFG L P
Sbjct: 362 KMVQVLHAYCIISAGIRISCTNQLGQGKRQPVVCTSGSSSIKENIGSVFGQKQLQSLIPF 421
Query: 139 VAICKSDS-CK---------------VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKV 182
V + SDS C+ V GF+S+ G GR+ DRQ+FF+N RP D KV
Sbjct: 422 VQLPPSDSVCEEYGLSCSDALHNLFYVSGFISQCAHGIGRSSTDRQFFFINRRPCDPAKV 481
Query: 183 SKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGL 239
S+LVNE+Y N QYP ++N V + D+NVTPDKR++ +E +L L+ L
Sbjct: 482 SRLVNEVYHMYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSL 538
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 60/77 (77%)
Query: 2 DVETPTNSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEE 61
+VE+ + I+PI++ VH+IC+GQV+ LS+AVKELVENS+DAGAT++++ LK+YG +
Sbjct: 184 EVESTEPAKAIKPIDQKSVHQICSGQVVLSLSTAVKELVENSVDAGATNVDVRLKDYGVD 243
Query: 62 WFQVVDNGCGISPNNFK 78
+V DNGCG+ NF+
Sbjct: 244 LVEVSDNGCGVEEENFE 260
>gi|392563903|gb|EIW57082.1| DNA mismatch repair protein MutL [Trametes versicolor FP-101664 SS1]
Length = 1096
Score = 184 bits (467), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 101/236 (42%), Positives = 133/236 (56%), Gaps = 48/236 (20%)
Query: 601 ATTELERLFRKEDFGRMKVIGQFNLGFII----------------GKLDQDLFIVDQHAA 644
AT L R+ K DF M+V+GQFN GFII G DLFIVDQHAA
Sbjct: 858 ATEVLSRVIDKADFATMEVLGQFNRGFIIVRRRKTIRANSEEEGPGVEMDDLFIVDQHAA 917
Query: 645 DEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSL---EEDPHAL 701
DEKYNFE L Q+T ++ Q L P L+LT +E+VA ++D++R+NGF L E+ P
Sbjct: 918 DEKYNFETLQQTTKIDSQKLFHPQVLELTAADELVALENVDVLRQNGFELAVCEDRP--- 974
Query: 702 AGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCP------- 754
G R +L+A P SK F +D+++L+ L D CP
Sbjct: 975 PGQRVQLEARPISKSTVFDTKDLEELLHLLQD-------------------CPAGQMVRC 1015
Query: 755 SRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
S+ RAM A RACR SIMIG L R +M +++H+ ++ PW+CPHGRPTMRHL D+
Sbjct: 1016 SKARAMFAMRACRMSIMIGTPLSRRQMTSVVQHMGTMDQPWHCPHGRPTMRHLSDV 1071
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 104/202 (51%), Gaps = 25/202 (12%)
Query: 80 RAVFLCQAYALIA-----KGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNI-- 132
+++ L AYAL+ KGVR TN KS L+T G+ S + ++ ++
Sbjct: 181 KSLTLLHAYALVPCAKENKGVRLSVTNHPKGGKKSSQLRTDGTPSTRASVSAIWSPKALD 240
Query: 133 --------YNCLEPVAICK----------SDSCKVEGFLSKPGQGSGRNLGDRQYFFVND 174
+N A+ + ++ KV G +SK GSGR DRQ+FFVN
Sbjct: 241 NLVDLELDFNVEVEAAVLRRLGKTQDDGSANEVKVRGLISKFAVGSGRTGTDRQFFFVNG 300
Query: 175 RPVDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHA 234
RP KV K NE+Y+ N+ Q P I +F++PT +CD+NV+PDKR + E ++ A
Sbjct: 301 RPCSPSKVQKAFNEVYRSFNATQSPFIIADFVLPTNSCDINVSPDKRTILLHSENHLVQA 360
Query: 235 LREGLQEIYSPNNASYSVNKVE 256
LR L+E Y+P +++ VN +
Sbjct: 361 LRAALEEKYAPARSTFDVNATQ 382
Score = 92.8 bits (229), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 57/70 (81%)
Query: 8 NSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVD 67
+S I+ ++ G +H+I +GQV+ DL +AVKELVENSLDAGAT+IE+ K+YG E+F+V+D
Sbjct: 6 SSSGIKALDGGSIHKITSGQVVVDLQTAVKELVENSLDAGATNIEVRFKDYGLEFFEVID 65
Query: 68 NGCGISPNNF 77
NG GISP ++
Sbjct: 66 NGSGISPADY 75
>gi|317027466|ref|XP_001399369.2| DNA mismatch repair protein (Pms1) [Aspergillus niger CBS 513.88]
Length = 1055
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/237 (40%), Positives = 142/237 (59%), Gaps = 20/237 (8%)
Query: 589 ENEERKARALAAATTELERLFRKEDFGRMKVIGQFNLGFIIG------------KLDQDL 636
++E+ A A L K+DF M+++GQFNLGFI+ +L
Sbjct: 781 QSEDETAAPQETAEERLSLTVSKDDFANMRIVGQFNLGFILATRSSTDDSGPGSSAKDEL 840
Query: 637 FIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEE 696
FI+DQHA+DEK+NFERL TV+ Q L++P +LDLT EE + + + KNGF +E
Sbjct: 841 FIIDQHASDEKFNFERLQAETVVQNQRLVQPKRLDLTAVEEEIVIENQAALEKNGFIVEV 900
Query: 697 DPHA--LAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVC- 753
D G R +L ++P SK++ FGV D+++LI L++ + ++ + T +
Sbjct: 901 DESGDEPIGRRCKLVSLPLSKEVVFGVRDLEELIVLLSE-----TPTNAARSATGMYIPR 955
Query: 754 PSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
PS+VR M A RACRSSIMIG L +MQK+++++ ++ PWNCPHGRPTMRHL+ L
Sbjct: 956 PSKVRKMFAMRACRSSIMIGKTLTVKQMQKVVQNMGTIDKPWNCPHGRPTMRHLMSL 1012
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 92/177 (51%), Gaps = 17/177 (9%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAIC- 142
L AYA ++ GVRF N+ GK VV T G+ + K+NI V+G L P+ +
Sbjct: 179 LLHAYACVSTGVRFSVRNSVGKTKNVVVFSTNGNQTTKENIANVYGAKTLLALIPLDLAL 238
Query: 143 ----------------KSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLV 186
+ + V G +SKP G GR DRQ FFVN RP LP+++K
Sbjct: 239 EFEPSAAAGRRITGSGELNKLTVRGHVSKPVFGEGRQTPDRQMFFVNSRPCGLPQIAKAF 298
Query: 187 NELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIY 243
NE+YK N Q P +F + T A DVNV+PDKR + D +++ +L+E L +++
Sbjct: 299 NEVYKSFNVSQSPFVFADFHMDTNAYDVNVSPDKRTILLHDAGALIDSLKESLVQLF 355
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 49/70 (70%)
Query: 8 NSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVD 67
N TI+ I +H+I +GQVI DL S KELVENSLDAGATSIEI K G + +V D
Sbjct: 2 NMATIKAIEARSIHQIQSGQVIVDLCSVAKELVENSLDAGATSIEIRFKNNGLDLIEVQD 61
Query: 68 NGCGISPNNF 77
NG GISP+N+
Sbjct: 62 NGSGISPDNY 71
>gi|317146967|ref|XP_001821792.2| DNA mismatch repair protein (Pms1) [Aspergillus oryzae RIB40]
Length = 1071
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 95/229 (41%), Positives = 135/229 (58%), Gaps = 21/229 (9%)
Query: 597 ALAAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQ-------------DLFIVDQHA 643
+L A L K+DFG+M++ GQFNLGFI+ +LFI+DQHA
Sbjct: 796 SLETAEERLSLTVSKDDFGKMRIAGQFNLGFILATRSSTGVSDSAPPSSKDELFIIDQHA 855
Query: 644 ADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHA--L 701
+DEK+NFERL TV+ Q L++P +LDLT EE + + + KNGF +E D
Sbjct: 856 SDEKFNFERLQAETVVQNQRLVQPKQLDLTAVEEEIVIENQSALEKNGFVVEVDDSGNEP 915
Query: 702 AGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAML 761
G R +L ++P SK++ FGV D+++LI L++ + Y PS+VR M
Sbjct: 916 IGRRCKLVSLPLSKEVVFGVRDLEELIVLLSEMPASSTAGPMY------VPRPSKVRKMF 969
Query: 762 ASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
A RACRSSIMIG L + +M +++ ++ ++ PWNCPHGRPTMRHL+ L
Sbjct: 970 AMRACRSSIMIGKNLSQKQMTRVVRNMGTIDKPWNCPHGRPTMRHLMSL 1018
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/201 (35%), Positives = 99/201 (49%), Gaps = 28/201 (13%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCL------- 136
L AYA ++KGVRF NT K VV T G+ + K+NI V+G L
Sbjct: 179 LLHAYACVSKGVRFNVKNTVAKTRNVVVFSTNGNQTTKENIANVYGAKTLLALIPLDLTL 238
Query: 137 --EPVAICK---------SDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKL 185
EP A K S+ V G +S+P G GR DRQ FFVN RP LP+++K
Sbjct: 239 EFEPSAAGKRAAVDEERESNKIFVRGHISRPVSGEGRQTPDRQMFFVNSRPCGLPQIAKA 298
Query: 186 VNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSP 245
NE+YK N Q P +F + T A DVNV+PDKR + D +++ +L+ L +++
Sbjct: 299 FNEVYKSFNVSQSPFVFADFHMDTNAYDVNVSPDKRTILLHDAGALIESLKTSLTQLFES 358
Query: 246 ----------NNASYSVNKVE 256
NNA S K++
Sbjct: 359 SDQTVPQSQVNNARQSTTKLQ 379
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 49/71 (69%)
Query: 8 NSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVD 67
N TI+ I VH+I +GQVI DL S KELVENSLDAGATSIE+ K G + +V D
Sbjct: 2 NMATIKAIEARSVHQIQSGQVIVDLCSVAKELVENSLDAGATSIEVRFKNNGLDLIEVQD 61
Query: 68 NGCGISPNNFK 78
NG GISP N++
Sbjct: 62 NGSGISPENYE 72
>gi|350634345|gb|EHA22707.1| DNA mismatch repair protein [Aspergillus niger ATCC 1015]
Length = 1043
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/237 (40%), Positives = 142/237 (59%), Gaps = 20/237 (8%)
Query: 589 ENEERKARALAAATTELERLFRKEDFGRMKVIGQFNLGFIIG------------KLDQDL 636
++E+ A A L K+DF M+++GQFNLGFI+ +L
Sbjct: 769 QSEDETAAPQETAEERLSLTVSKDDFANMRIVGQFNLGFILATRSSTDDSGPGSSAKDEL 828
Query: 637 FIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEE 696
FI+DQHA+DEK+NFERL TV+ Q L++P +LDLT EE + + + KNGF +E
Sbjct: 829 FIIDQHASDEKFNFERLQAETVVQNQRLVQPKRLDLTAVEEEIVIENQAALEKNGFIVEV 888
Query: 697 DPHA--LAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVC- 753
D G R +L ++P SK++ FGV D+++LI L++ + ++ + T +
Sbjct: 889 DESGDEPIGRRCKLVSLPLSKEVVFGVRDLEELIVLLSE-----TPTNAARSATGMYIPR 943
Query: 754 PSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
PS+VR M A RACRSSIMIG L +MQK+++++ ++ PWNCPHGRPTMRHL+ L
Sbjct: 944 PSKVRKMFAMRACRSSIMIGKTLTVKQMQKVVQNMGTIDKPWNCPHGRPTMRHLMSL 1000
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 92/177 (51%), Gaps = 17/177 (9%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAIC- 142
L AYA ++ GVRF N+ GK VV T G+ + K+NI V+G L P+ +
Sbjct: 177 LLHAYACVSTGVRFSVRNSVGKTKNVVVFSTNGNQTTKENIANVYGAKTLLALIPLDLAL 236
Query: 143 ----------------KSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLV 186
+ + V G +SKP G GR DRQ FFVN RP LP+++K
Sbjct: 237 EFEPSAAAGRRITGSGELNKLTVRGHVSKPVFGEGRQTPDRQMFFVNSRPCGLPQIAKAF 296
Query: 187 NELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIY 243
NE+YK N Q P +F + T A DVNV+PDKR + D +++ +L+E L +++
Sbjct: 297 NEVYKSFNVSQSPFVFADFHMDTNAYDVNVSPDKRTILLHDAGALIDSLKESLVQLF 353
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 48/67 (71%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
TI+ I +H+I +GQVI DL S KELVENSLDAGATSIEI K G + +V DNG
Sbjct: 3 TIKAIEARSIHQIQSGQVIVDLCSVAKELVENSLDAGATSIEIRFKNNGLDLIEVQDNGS 62
Query: 71 GISPNNF 77
GISP+N+
Sbjct: 63 GISPDNY 69
>gi|400596335|gb|EJP64109.1| DNA mismatch repair protein MutL [Beauveria bassiana ARSEF 2860]
Length = 1015
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 96/230 (41%), Positives = 132/230 (57%), Gaps = 20/230 (8%)
Query: 599 AAATTELERLFRKEDFGRMKVIGQFNLGFIIG----------------KLDQDLFIVDQH 642
A A + L+ + KEDFG+M+V GQFN+GFII + +L I+DQH
Sbjct: 760 ADAESRLQLIISKEDFGKMRVAGQFNMGFIIAVRPRASNSKSPSNGSDSSNDELLIIDQH 819
Query: 643 AADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPH--A 700
A+DEKYNFERL STV+ Q L+ P L+LT EE + ++ I NGF + D +
Sbjct: 820 ASDEKYNFERLQSSTVVQSQRLVHPKTLELTALEEEIVMENLPAIEANGFKILVDTSGDS 879
Query: 701 LAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAM 760
G R L A+P S++ F +ED+++LI+ L D P++VR M
Sbjct: 880 PVGSRCMLTALPLSRETAFSLEDLEELIAILGD--APSGGGGGGIGGNTQIPRPTKVRKM 937
Query: 761 LASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
A RACRSS+MIG AL ++M ++ H+ +L+ PWNCPHGRPTMRHL L
Sbjct: 938 FAMRACRSSVMIGKALTTSQMYGLVRHMGELDKPWNCPHGRPTMRHLCRL 987
Score = 108 bits (271), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 93/191 (48%), Gaps = 18/191 (9%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
+ + L YA I V+F + K + ++ T+G+ + KDNII +FG L +
Sbjct: 173 KVIALLNQYACILTQVKFSVSQQPTKGKRILLFSTKGNMTTKDNIINIFGAKTMTALVAL 232
Query: 140 AI---------------CKSDSCK---VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPK 181
+ ++D+ K V G +S+P G GR DRQ FFVN RP LP+
Sbjct: 233 DLKLEIQSTASALSMTTAEADASKDVRVLGHVSRPVHGEGRQTPDRQMFFVNGRPCGLPQ 292
Query: 182 VSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQE 241
+K NE+YK N Q P + + T DVNV+PDKR + D+ +L +L L E
Sbjct: 293 FAKTFNEVYKSYNYSQSPFIFADIRLDTNMYDVNVSPDKRSILLHDQNHLLESLHSALVE 352
Query: 242 IYSPNNASYSV 252
++ ++ + V
Sbjct: 353 LFDQHDYTVPV 363
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 53/72 (73%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
TI+ I+ VH+I +GQVI DL S VKELVENS+DAGAT+I++ K+ G + ++ DNG
Sbjct: 3 TIKQIDGRSVHQIQSGQVIVDLCSVVKELVENSVDAGATTIDVRFKDQGLDSIEIQDNGS 62
Query: 71 GISPNNFKVRAV 82
GISP N++ A+
Sbjct: 63 GISPANYESVAL 74
>gi|53133740|emb|CAG32199.1| hypothetical protein RCJMB04_19o6 [Gallus gallus]
Length = 871
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/271 (39%), Positives = 148/271 (54%), Gaps = 30/271 (11%)
Query: 544 LQFSIQDLRKRRQQRLSIMQSSCHTSGSVKMRRCFAAATLELSQPENEERKARALAAATT 603
L+FS++ L +R ++ + Q T + R ++S EN+ A
Sbjct: 627 LEFSMKALAERLRKIVQQQQKCTETQNYRRFR-------AKISPGENK--------VAED 671
Query: 604 ELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQP 663
EL + KE F +M++ L +++ DLFI+DQHA DEKYNFE L Q TVL Q
Sbjct: 672 ELRKEISKEMFAKMEIHWPVQLRVYNSQVESDLFIIDQHATDEKYNFEMLQQHTVLQGQK 731
Query: 664 LLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVED 723
L+ P L+LT E V +++I RKNGF + +A R +L ++P SK TFG +D
Sbjct: 732 LIAPQNLNLTAVNETVLIENLEIFRKNGFDFVINENAPVTQRVKLISLPTSKNWTFGPQD 791
Query: 724 VKDLISTLADNQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGRNEMQ 782
+ +LI L+D G +C PSRVR M ASRACR S+MIG AL EM+
Sbjct: 792 IDELIFMLSDCPG--------------VMCRPSRVRQMFASRACRKSVMIGTALNVQEMK 837
Query: 783 KILEHLADLNSPWNCPHGRPTMRHLVDLTTI 813
K++ H+ ++ PWNCPHGRPTMRH+ L I
Sbjct: 838 KLVTHMGEIEHPWNCPHGRPTMRHIASLDLI 868
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/189 (37%), Positives = 100/189 (52%), Gaps = 17/189 (8%)
Query: 83 FLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV--- 139
+L + L +GVR CTN G+ KS V+ T G +LK+NI VFG L P
Sbjct: 187 YLAKHTVLFQQGVRINCTNQVGQGKKSPVVSTTGGPNLKENIGAVFGKKQLQSLIPFVQL 246
Query: 140 ----AICKSDSCK----------VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKL 185
A+C+ K + GF+S+ G GR+ DRQ+FF+N RP D KV KL
Sbjct: 247 PPNEAVCEEYGLKSTDLPEKLYSITGFISRCDHGVGRSTTDRQFFFINQRPCDPAKVVKL 306
Query: 186 VNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSP 245
VNE+Y N QYP ++N V + D+NVTPDKR++ +E +L L+ L E++
Sbjct: 307 VNEVYHLYNKHQYPFIVLNICVDSECVDINVTPDKRQILLQEEKLLLAILKTSLIEMFGS 366
Query: 246 NNASYSVNK 254
+ +VN+
Sbjct: 367 DVNKLNVNQ 375
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 42/80 (52%), Positives = 58/80 (72%), Gaps = 2/80 (2%)
Query: 1 MDVETPTNSP--TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEY 58
M+ P + P TI+ I++ VHRIC+GQV+ L +AVKELVENSLDAGAT+I++ LK++
Sbjct: 1 MEEAAPCSEPAKTIKRIDRESVHRICSGQVVLSLGTAVKELVENSLDAGATNIDVRLKDH 60
Query: 59 GEEWFQVVDNGCGISPNNFK 78
G E +V DNG G+ NF+
Sbjct: 61 GAELIEVSDNGGGVEEENFE 80
>gi|448114216|ref|XP_004202519.1| Piso0_001357 [Millerozyma farinosa CBS 7064]
gi|359383387|emb|CCE79303.1| Piso0_001357 [Millerozyma farinosa CBS 7064]
Length = 968
Score = 184 bits (466), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 92/211 (43%), Positives = 129/211 (61%), Gaps = 11/211 (5%)
Query: 601 ATTELERLFRKEDFGRMKVIGQFNLGFIIGKLD-QDLFIVDQHAADEKYNFERLSQSTVL 659
A +L K DF RMK+IGQFNLGF++ L+ +LFI+DQHA+DEKYNFERL+ +T+
Sbjct: 755 AQEKLTYTISKSDFSRMKLIGQFNLGFVLVTLNSNNLFIIDQHASDEKYNFERLNSNTIF 814
Query: 660 NQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITF 719
Q L+ P L+L +E+ +M+ RKNGF L + G R +L A+P S+ +TF
Sbjct: 815 KSQHLVIPQVLELNIIDEMTVMDNMEAFRKNGFVLSINEENSPGRRIQLLALPNSESVTF 874
Query: 720 GVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRN 779
D +L+ +I++ S+ S++RA+ A RACR SIMIG L R
Sbjct: 875 DTGDFYELLH----------LINTGNTTNPGSIRCSKIRALFAMRACRGSIMIGQHLSRK 924
Query: 780 EMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
M ++ +L L+ PWNCPHGRPTMRHL++L
Sbjct: 925 TMSNVIRNLGLLDKPWNCPHGRPTMRHLIEL 955
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 103/196 (52%), Gaps = 27/196 (13%)
Query: 88 YALIAKGVRFVCTNTTGKNVK-SVVLKTQGSS--SLKDNIITVFGMNIYNCLEPVAICKS 144
Y LI VRF N K K S+VL TQG+S S+ D++I++FG N L PV I
Sbjct: 181 YMLIHPHVRFSVNNINSKTKKKSLVLGTQGTSKSSILDSMISIFGTNGAYGLVPVDIEVQ 240
Query: 145 D------------------SCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLV 186
D + K G++S G GR+ GDRQ+ F+N RP+ K K +
Sbjct: 241 DLEMKLKLHIGEFPVTQKLNIKFTGYISNSSFGLGRSAGDRQFVFLNGRPISSKKFLKTI 300
Query: 187 NELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYS-- 244
NE+YK N QYP+ ++N I+ T+ DVNVTPDKR + +E + L++ L +++
Sbjct: 301 NEVYKSYNHVQYPVVVLNIIIDTKFLDVNVTPDKRTILIHNENIVHDVLKDELSKLFDGL 360
Query: 245 ----PNNASYSVNKVE 256
P N S+++++
Sbjct: 361 QNLIPKNEEKSISEID 376
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 35/48 (72%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYG 59
I+ I +HRI +GQVI DL S VKELVENSLDA + +I+I ++YG
Sbjct: 3 IKNIQSTDIHRITSGQVIVDLVSIVKELVENSLDANSNTIDITFRDYG 50
>gi|358365802|dbj|GAA82424.1| DNA mismatch repair protein [Aspergillus kawachii IFO 4308]
Length = 1050
Score = 183 bits (465), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 98/236 (41%), Positives = 137/236 (58%), Gaps = 18/236 (7%)
Query: 589 ENEERKARALAAATTELERLFRKEDFGRMKVIGQFNLGFIIG------------KLDQDL 636
+ E+ A A L KEDF M+++GQFNLGFI+ +L
Sbjct: 777 QGEDEMAAQQETAEERLSLTVSKEDFTNMRIVGQFNLGFILATRSSADDTGAGSSAKDEL 836
Query: 637 FIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEE 696
FI+DQHA+DEK+NFERL TV+ Q L++P +LDLT EE + + + KNGF +E
Sbjct: 837 FIIDQHASDEKFNFERLQAETVVQNQRLVQPKRLDLTAVEEEIVIENQAALEKNGFIVEV 896
Query: 697 DPHA--LAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCP 754
D G R +L ++P SK++ FGV D+++LI L++ + +S P
Sbjct: 897 DESGDEPIGRRCKLVSLPLSKEVVFGVRDLEELIVLLSETPTNAARSASGMYIPR----P 952
Query: 755 SRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
S+VR M A RACRSSIMIG L +MQK++ ++ ++ PWNCPHGRPTMRHL+ L
Sbjct: 953 SKVRKMFAMRACRSSIMIGKTLTVKQMQKVVHNMGTIDKPWNCPHGRPTMRHLMSL 1008
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 92/177 (51%), Gaps = 17/177 (9%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAIC- 142
L AYA ++ GVRF N+ GK VV T G+ + K+NI V+G L P+ +
Sbjct: 179 LLHAYACVSTGVRFSVRNSVGKTKNVVVFSTNGNQTTKENIANVYGAKTLLALIPLDLAL 238
Query: 143 ----------------KSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLV 186
+ + V G +SKP G GR DRQ FFVN RP LP+++K
Sbjct: 239 EFEPSAAAGRRITGSGELNKLTVRGHVSKPVFGEGRQTPDRQMFFVNSRPCGLPQIAKAF 298
Query: 187 NELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIY 243
NE+YK N Q P +F + T A DVNV+PDKR + D +++ +L+E L +++
Sbjct: 299 NEVYKSFNVSQSPFVFADFHMDTNAYDVNVSPDKRTILLHDAGALIDSLKESLVQLF 355
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 49/70 (70%)
Query: 8 NSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVD 67
N TI+ I +H+I +GQVI DL S KELVENSLDAGATSIEI K G + +V D
Sbjct: 2 NMATIKAIEARSIHQIQSGQVIVDLCSVAKELVENSLDAGATSIEIRFKNNGLDLIEVQD 61
Query: 68 NGCGISPNNF 77
NG GISP+N+
Sbjct: 62 NGSGISPDNY 71
>gi|303322639|ref|XP_003071311.1| DNA mismatch repair protein MutL family protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240111013|gb|EER29166.1| DNA mismatch repair protein MutL family protein [Coccidioides
posadasii C735 delta SOWgp]
Length = 1026
Score = 183 bits (465), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 100/236 (42%), Positives = 138/236 (58%), Gaps = 25/236 (10%)
Query: 600 AATTELERLFRKEDFGRMKVIGQFNLGFIIG-------------KLDQDLFIVDQHAADE 646
+A T L KEDF +M+V+GQFNLGFI+ +LFI+DQHA+DE
Sbjct: 741 SAETRLSLTVSKEDFAKMRVVGQFNLGFILAIRPGTDSTDFQDNPTKDELFIIDQHASDE 800
Query: 647 KYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHA--LAGL 704
KYNFERL TV+ Q L+RP LDLT EE V ++ + KNGF ++ D G
Sbjct: 801 KYNFERLQAETVVQNQRLVRPKTLDLTAVEEEVIIDNIPTLEKNGFIVDIDTSGDEPIGR 860
Query: 705 RFRLKAVPFSKKITFGVEDVKDLISTLAD---------NQGECSIISSYKMDTADSVC-P 754
R +L ++P SK++ F D+++LI L++ + G+ SS T V P
Sbjct: 861 RCKLISLPLSKEVVFNTRDLEELIVLLSESPQHHRASQDDGDVDPASSSSQFTNLYVPRP 920
Query: 755 SRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
+VR M A RACRSSIMIG +L +M++++ H+ ++ PWNCPHGRPTMRHL+ L
Sbjct: 921 GKVRKMFAMRACRSSIMIGKSLTVKQMERVVRHMGMIDKPWNCPHGRPTMRHLMSL 976
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 93/182 (51%), Gaps = 18/182 (9%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCL--- 136
+ + L AYA I+ GVRF N K VV T+ + + K+NI V+G L
Sbjct: 175 KVLGLLHAYACISTGVRFNVKNQMPKGKSVVVFATKSNPTTKENISNVYGAKTLLALIPL 234
Query: 137 ------EPVAICKS---------DSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPK 181
EP A K+ + V G++SKP G GR DRQ FFVN RP LP+
Sbjct: 235 DLELEFEPSAESKTSRRQQDGQVNKIFVHGYISKPVFGEGRQTPDRQMFFVNSRPCGLPQ 294
Query: 182 VSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQE 241
+++ NE+Y+ N Q P NF + T A DVNV+PDKR + D +++ +L+ L +
Sbjct: 295 IARAFNEVYRSFNISQSPFIFANFEMNTNAYDVNVSPDKRTILLHDAGALIESLKASLTK 354
Query: 242 IY 243
++
Sbjct: 355 LF 356
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 50/71 (70%)
Query: 8 NSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVD 67
N TI+ I +H+I +GQVI DL S VKELVENSLDAGATSI+I K G + +V D
Sbjct: 2 NMATIKAIEARSIHQIQSGQVIVDLCSVVKELVENSLDAGATSIDIRFKNNGLDLIEVQD 61
Query: 68 NGCGISPNNFK 78
NG GI PNN++
Sbjct: 62 NGHGIPPNNYE 72
>gi|226286592|gb|EEH42105.1| DNA mismatch repair protein pms1 [Paracoccidioides brasiliensis Pb18]
Length = 1067
Score = 183 bits (465), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 100/233 (42%), Positives = 136/233 (58%), Gaps = 25/233 (10%)
Query: 603 TELERLFRKEDFGRMKVIGQFNLGFIIGKL---------------DQDLFIVDQHAADEK 647
T L KEDF M++IGQFNLGFII D +LFI+DQHA+DEK
Sbjct: 793 TRLSLSVSKEDFATMRIIGQFNLGFIIATRFRGDPDNSTATIDHKDDELFIIDQHASDEK 852
Query: 648 YNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHA--LAGLR 705
YNFERL TV+ Q L++P LDLT EE + ++ + KNGF +E D G R
Sbjct: 853 YNFERLQAETVVQNQRLVKPKTLDLTAVEEEIIIDNLPALEKNGFIVEVDRSGDEPIGRR 912
Query: 706 FRLKAVPFSKKITFGVEDVKDLISTLADN-QGECSIISSYKMDTADSVC-------PSRV 757
+L ++P SK++ F + D+++LI L ++ Q + + S + S PS+V
Sbjct: 913 CKLTSLPLSKEVVFNIRDLEELIVLLGESPQAQSAPSPSSFSTLSSSPLTSKYVPRPSKV 972
Query: 758 RAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
R M A RACRSSIMIG +L +M K++ H+ ++ PWNCPHGRPTMRHL+ L
Sbjct: 973 RKMFAMRACRSSIMIGKSLTAKQMGKVVRHMGMIDKPWNCPHGRPTMRHLMSL 1025
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 94/182 (51%), Gaps = 18/182 (9%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
+ + L AYA ++ GVRF N K +V T+ +++ K+NI ++G L P+
Sbjct: 173 KVLGLLHAYACVSTGVRFNVKNQMSKGKNVLVFATKSNATTKENISNIYGAKSLLALTPL 232
Query: 140 ------------------AICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPK 181
I +++ ++G +SKP G GR DRQ FFVN RP LP+
Sbjct: 233 DLELEFQPSATNGKSIRGGIQEANKIFIQGHISKPIFGEGRQTPDRQMFFVNSRPCGLPQ 292
Query: 182 VSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQE 241
++K NE+YK N Q P +F + T + DVNV+PDKR + D +++ +L+ L E
Sbjct: 293 IAKAFNEVYKSFNISQSPFIFADFKMDTNSYDVNVSPDKRTILLHDAGTLIESLKTSLTE 352
Query: 242 IY 243
++
Sbjct: 353 LF 354
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 52/72 (72%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
TI+ I VH+I +GQVI DL S VKELVENSLDAGATSI+I K G + +V DNG
Sbjct: 3 TIKAIEARSVHQIQSGQVIIDLCSVVKELVENSLDAGATSIDIRFKNNGLDLIEVQDNGK 62
Query: 71 GISPNNFKVRAV 82
GISP++++ A+
Sbjct: 63 GISPDDYETVAL 74
>gi|225684832|gb|EEH23116.1| DNA mismatch repair protein PMS1 [Paracoccidioides brasiliensis Pb03]
Length = 1105
Score = 183 bits (465), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 100/233 (42%), Positives = 136/233 (58%), Gaps = 25/233 (10%)
Query: 603 TELERLFRKEDFGRMKVIGQFNLGFIIGKL---------------DQDLFIVDQHAADEK 647
T L KEDF M++IGQFNLGFII D +LFI+DQHA+DEK
Sbjct: 831 TRLSLSVSKEDFATMRIIGQFNLGFIIATRFRGDPDNSTATIDHKDDELFIIDQHASDEK 890
Query: 648 YNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHA--LAGLR 705
YNFERL TV+ Q L++P LDLT EE + ++ + KNGF +E D G R
Sbjct: 891 YNFERLQAETVVQNQRLVKPKTLDLTAVEEEIIIDNLPALEKNGFIVEVDRSGDEPIGRR 950
Query: 706 FRLKAVPFSKKITFGVEDVKDLISTLADN-QGECSIISSYKMDTADSVC-------PSRV 757
+L ++P SK++ F + D+++LI L ++ Q + + S + S PS+V
Sbjct: 951 CKLTSLPLSKEVVFNIRDLEELIVLLGESPQAQSAPSPSSFSTLSSSPLTSKYVPRPSKV 1010
Query: 758 RAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
R M A RACRSSIMIG +L +M K++ H+ ++ PWNCPHGRPTMRHL+ L
Sbjct: 1011 RKMFAMRACRSSIMIGKSLTAKQMGKVVRHMGMIDKPWNCPHGRPTMRHLMSL 1063
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 94/182 (51%), Gaps = 18/182 (9%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
+ + L AYA ++ GVRF N K +V T+ +++ K+NI ++G L P+
Sbjct: 211 KVLGLLHAYACVSTGVRFNVKNQMSKGKNVLVFATKSNATTKENISNIYGAKTLLALTPL 270
Query: 140 ------------------AICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPK 181
I +++ ++G +SKP G GR DRQ FFVN RP LP+
Sbjct: 271 DLELEFQPSATNGKSIRGGIQEANKIFIQGHISKPIFGEGRQTPDRQMFFVNSRPCGLPQ 330
Query: 182 VSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQE 241
++K NE+YK N Q P +F + T + DVNV+PDKR + D +++ +L+ L E
Sbjct: 331 IAKAFNEVYKSFNILQSPFIFADFKMDTNSYDVNVSPDKRTILLHDAGTLIESLKTSLTE 390
Query: 242 IY 243
++
Sbjct: 391 LF 392
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 53/75 (70%)
Query: 8 NSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVD 67
N TI+ I VH+I +GQVI DL S VKELVENSLDAGATSI+I K G + +V D
Sbjct: 38 NMATIKAIEARSVHQIQSGQVIIDLCSVVKELVENSLDAGATSIDIRFKNNGLDLIEVQD 97
Query: 68 NGCGISPNNFKVRAV 82
NG GISP++++ A+
Sbjct: 98 NGKGISPDDYETVAL 112
>gi|342879996|gb|EGU81226.1| hypothetical protein FOXB_08259 [Fusarium oxysporum Fo5176]
Length = 1010
Score = 183 bits (465), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 96/231 (41%), Positives = 134/231 (58%), Gaps = 28/231 (12%)
Query: 598 LAAATTE--LERLFRKEDFGRMKVIGQFNLGFIIG--------------KLDQDLFIVDQ 641
LAAA E L ++DF +MK++GQFN+GFII +LFI+DQ
Sbjct: 763 LAAANAEEKLSLTIARKDFLKMKIVGQFNMGFIIATRPASTGSEEDLEVAQKNELFIIDQ 822
Query: 642 HAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHA- 700
HA DEK+NFERL + + Q L+ P +L+LT EE + ++ I NGF + D
Sbjct: 823 HATDEKFNFERLQEIQTVQSQRLVHPKRLELTALEEEIVLQNISAIEANGFKVHVDMTGD 882
Query: 701 -LAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRA 759
G R + A+P S+++TF + D+++LI+ L + E I PS+VR
Sbjct: 883 EPVGSRCEVLALPMSREVTFSITDLEELIALLGEESSESKHIPR----------PSKVRK 932
Query: 760 MLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
M ASRACRSS+MIG AL +M+ ++ H+A+L+ PWNCPHGRPTMRHL L
Sbjct: 933 MFASRACRSSVMIGKALTHGQMETLVRHMAELDKPWNCPHGRPTMRHLCQL 983
Score = 109 bits (272), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 93/193 (48%), Gaps = 22/193 (11%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
+ + L YA I ++F + K + + T+G+ + ++NII +FG L P+
Sbjct: 173 KVIALLGQYACIQTNLKFSVSQQPTKGKRIHLFSTKGNPTTRENIINIFGAKTMTVLVPL 232
Query: 140 AIC-----------------KSDSCK---VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDL 179
+ SC+ V G +S+P G GR DRQ FFVN RP L
Sbjct: 233 DLTLEMHPSTGGPALQIDQKHKSSCRDVRVVGHVSRPSHGDGRQTPDRQMFFVNGRPCGL 292
Query: 180 PKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGL 239
P+ +K NE+YK NS Q P + + + T DVNV+PDKR + D+ +L LR L
Sbjct: 293 PQFAKAFNEVYKAYNSSQAPFILADIQLDTHMYDVNVSPDKRSILLHDQNQLLDNLRTSL 352
Query: 240 QEIYSPNNASYSV 252
++ ++ YSV
Sbjct: 353 TALF--DSQDYSV 363
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 49/67 (73%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
TI+ I+ VH+I +GQVI DL S VKELVENS+DAGATSI++ K G + +V DNG
Sbjct: 3 TIKQIDGRTVHQIQSGQVIVDLCSVVKELVENSIDAGATSIDVRFKNQGLDLIEVADNGS 62
Query: 71 GISPNNF 77
GI+P N+
Sbjct: 63 GIAPANY 69
>gi|111380657|gb|ABH09705.1| MLH2-like protein [Talaromyces marneffei]
Length = 990
Score = 183 bits (465), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 93/215 (43%), Positives = 133/215 (61%), Gaps = 19/215 (8%)
Query: 611 KEDFGRMKVIGQFNLGFIIG-----------KLDQDLFIVDQHAADEKYNFERLSQSTVL 659
K+DF +M+++GQFNLGFI+ + +LFI+DQHA+DEKYNFERL TV+
Sbjct: 728 KDDFAKMRIVGQFNLGFILAIRSHGADEPTASAEDELFIIDQHASDEKYNFERLQAETVV 787
Query: 660 NQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDP--HALAGLRFRLKAVPFSKKI 717
Q L+ P LDLT EE + + + KNGF +E D + G R +L ++P SK++
Sbjct: 788 QNQRLVHPKTLDLTAVEEEIIRENKLALEKNGFVIEVDDSGNEPIGRRCKLVSLPLSKEV 847
Query: 718 TFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCP--SRVRAMLASRACRSSIMIGDA 775
F + D+++LI L+ E ++ T+D+ P S+VR M A RACRSSIMIG
Sbjct: 848 VFDIRDLEELIVLLS----EAPTSATRNATTSDTYIPRPSKVRKMFAMRACRSSIMIGKT 903
Query: 776 LGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
L +M+K + ++ ++ PWNCPHGRPTMRHL+ L
Sbjct: 904 LTVKQMEKAVRNMGTIDKPWNCPHGRPTMRHLMSL 938
Score = 125 bits (315), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 110/205 (53%), Gaps = 23/205 (11%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCL--- 136
+ + L YA I+ GVRF NT K + V+L T+ ++S++DNI V+G L
Sbjct: 152 KVINLLNEYACISTGVRFSVKNTDSKKRQLVLLTTKANASIRDNIANVYGAKTLLTLIPL 211
Query: 137 ------EPVAICKS-----DSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKL 185
EP A K + V G++S+P G GR DRQ ++VN RP +P+++K
Sbjct: 212 ELELEFEPSATGKRLNRDLNKIHVRGYVSRPVVGEGRGTRDRQMYYVNSRPCGIPQIAKA 271
Query: 186 VNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSP 245
NE+YK N Q P + +F + T A DVNV+PDKR + D +++ +L+E L +++
Sbjct: 272 FNEVYKTYNISQAPFVLADFQMDTNAYDVNVSPDKRTILLHDSAALIESLKEALDQMFQD 331
Query: 246 N-----NASYSVNK----VEQLIEP 261
+ +++NK ++Q ++P
Sbjct: 332 AEQTVPQSQFTINKQQTDIQQRLKP 356
>gi|345490790|ref|XP_003426459.1| PREDICTED: mismatch repair endonuclease PMS2 [Nasonia vitripennis]
Length = 683
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 90/202 (44%), Positives = 125/202 (61%), Gaps = 12/202 (5%)
Query: 604 ELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQP 663
EL+R KE F +M++IGQFNLGFI+ LD D+FIVDQHA+DEKY FE+LS T L Q
Sbjct: 480 ELQRELTKESFEKMQIIGQFNLGFILTSLDSDIFIVDQHASDEKYRFEKLSNETKLKTQK 539
Query: 664 LLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVED 723
L+ P KL+ + E + + I +NGF+ G R L +P S F +ED
Sbjct: 540 LILPKKLNFSVLNETILMENQRIFEENGFTFRIKDEGDPGNRVELTGMPVSYGWQFDLED 599
Query: 724 VKDLISTLAD--NQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEM 781
+++LI + + + G +II P+RVR MLASRACRS++MIG AL +M
Sbjct: 600 IEELIFIIREGGDDGTSTIIPR----------PTRVRQMLASRACRSAVMIGKALNFTDM 649
Query: 782 QKILEHLADLNSPWNCPHGRPT 803
Q++L+ ++ + +PWNCPHGRPT
Sbjct: 650 QRLLKQMSQMKNPWNCPHGRPT 671
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 102/199 (51%), Gaps = 23/199 (11%)
Query: 79 VRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFG--------- 129
+ + + +Y L++ GV+ CTNT G SVV+ T GS ++ DNI VFG
Sbjct: 181 TKMIQILYSYCLVSTGVKITCTNTVGNKPGSVVVSTHGSINVLDNITAVFGRKGKENLIE 240
Query: 130 ----------MNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDL 179
+ YN ++I S C F+S GR+ DRQ+F+VN RP D
Sbjct: 241 IELQSPSEEILQEYNLPNDISINFSWHC----FVSSCSHTLGRSSPDRQFFYVNGRPCDP 296
Query: 180 PKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGL 239
K+S+L+N +Y N++QYP ++ + DVNVTPDKR + F+ E +L ++
Sbjct: 297 AKISRLINHIYHKYNNKQYPFVYLDIKLKQSCADVNVTPDKRTILFTQEQILLATIKSNF 356
Query: 240 QEIYSPNNASYSVNKVEQL 258
+ +S S++V +E+L
Sbjct: 357 ERTWSNMQGSFTVKTLEEL 375
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 53/74 (71%)
Query: 5 TPTNSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQ 64
T S I I+K VHRIC+GQV+ DL+ AVKELVENSLD+GATS+E+ L +YG+
Sbjct: 7 TAEESKKISAISKEAVHRICSGQVVVDLAVAVKELVENSLDSGATSVEVKLIDYGKTCIT 66
Query: 65 VVDNGCGISPNNFK 78
V+DNG G+ +F+
Sbjct: 67 VIDNGSGVLEKDFE 80
>gi|320169208|gb|EFW46107.1| Pms2-PA [Capsaspora owczarzaki ATCC 30864]
Length = 975
Score = 183 bits (464), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 96/183 (52%), Positives = 118/183 (64%), Gaps = 15/183 (8%)
Query: 600 AATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVL 659
AA EL R K DF +MKV+GQFN GFII KLD+DLF+VDQHA DEKYN+E+L +S L
Sbjct: 794 AAVAELARSIFKTDFAKMKVLGQFNRGFIIAKLDKDLFLVDQHATDEKYNYEKLQESVRL 853
Query: 660 NQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITF 719
QPL+RP+ L LT EVV ++DI R NGF D A A R RL A+PFSKK TF
Sbjct: 854 QSQPLIRPMPLQLTAANEVVLMDNIDIFRMNGFDFVVDESAPATERVRLSAMPFSKKTTF 913
Query: 720 GVEDVKDLISTLADNQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGR 778
G DV +L+ L+D+ G +C PSRV +MLASRACR S+MIGD L
Sbjct: 914 GPSDVDELLYRLSDSPG--------------VMCRPSRVASMLASRACRKSVMIGDPLST 959
Query: 779 NEM 781
+++
Sbjct: 960 SQI 962
Score = 132 bits (331), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 100/182 (54%), Gaps = 19/182 (10%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP- 138
+ + + QAY ++A GVR C+N GK +S+V + G+ ++KDN+ +FG+ L P
Sbjct: 294 KLIAMLQAYCIVATGVRISCSNQIGKTPRSMVFASPGAETMKDNVTAIFGIKQTQQLMPF 353
Query: 139 ---------VAICKSD---------SCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLP 180
A+ +D + K+ G +SKP G GR+ DRQ F+VN RP D+P
Sbjct: 354 VQLSSSELTAALATTDAGSSQVIFPTFKITGLISKPMAGCGRSSTDRQCFYVNGRPCDMP 413
Query: 181 KVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQ 240
K+SK+ NE+Y + +P +N +P+ A DVNVTPDKR + DE ++ A + L
Sbjct: 414 KLSKVANEIYHSFIAGSFPALFLNLALPSAAIDVNVTPDKRTILLHDEKELVLAFKTCLS 473
Query: 241 EI 242
I
Sbjct: 474 AI 475
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 56/67 (83%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+PI+ VHRIC+GQVI L++AVKELVENS+DAGAT+IEI L+E+G E +V+DNG G
Sbjct: 126 IKPIDARSVHRICSGQVILSLATAVKELVENSIDAGATAIEIRLREHGAELIEVIDNGSG 185
Query: 72 ISPNNFK 78
I P+NF+
Sbjct: 186 IEPHNFQ 192
>gi|212530184|ref|XP_002145249.1| DNA mismatch repair protein (Pms1), putative [Talaromyces marneffei
ATCC 18224]
gi|210074647|gb|EEA28734.1| DNA mismatch repair protein (Pms1), putative [Talaromyces marneffei
ATCC 18224]
Length = 1011
Score = 183 bits (464), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 93/215 (43%), Positives = 133/215 (61%), Gaps = 19/215 (8%)
Query: 611 KEDFGRMKVIGQFNLGFIIG-----------KLDQDLFIVDQHAADEKYNFERLSQSTVL 659
K+DF +M+++GQFNLGFI+ + +LFI+DQHA+DEKYNFERL TV+
Sbjct: 749 KDDFAKMRIVGQFNLGFILAIRSHGADEPTASAEDELFIIDQHASDEKYNFERLQAETVV 808
Query: 660 NQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDP--HALAGLRFRLKAVPFSKKI 717
Q L+ P LDLT EE + + + KNGF +E D + G R +L ++P SK++
Sbjct: 809 QNQRLVHPKTLDLTAVEEEIIRENKLALEKNGFVIEVDDSGNEPIGRRCKLVSLPLSKEV 868
Query: 718 TFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCP--SRVRAMLASRACRSSIMIGDA 775
F + D+++LI L+ E ++ T+D+ P S+VR M A RACRSSIMIG
Sbjct: 869 VFDIRDLEELIVLLS----EAPTSATRNATTSDTYIPRPSKVRKMFAMRACRSSIMIGKT 924
Query: 776 LGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
L +M+K + ++ ++ PWNCPHGRPTMRHL+ L
Sbjct: 925 LTVKQMEKAVRNMGTIDKPWNCPHGRPTMRHLMSL 959
Score = 125 bits (315), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 110/205 (53%), Gaps = 23/205 (11%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCL--- 136
+ + L YA I+ GVRF NT K + V+L T+ ++S++DNI V+G L
Sbjct: 173 KVINLLNEYACISTGVRFSVKNTDSKKRQLVLLTTKANASIRDNIANVYGAKTLLTLIPL 232
Query: 137 ------EPVAICKS-----DSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKL 185
EP A K + V G++S+P G GR DRQ ++VN RP +P+++K
Sbjct: 233 ELELEFEPSATGKRLNRDLNKIHVRGYVSRPVVGEGRGTRDRQMYYVNSRPCGIPQIAKA 292
Query: 186 VNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSP 245
NE+YK N Q P + +F + T A DVNV+PDKR + D +++ +L+E L +++
Sbjct: 293 FNEVYKTYNISQAPFVLADFQMDTNAYDVNVSPDKRTILLHDSAALIESLKEALDQMFQD 352
Query: 246 N-----NASYSVNK----VEQLIEP 261
+ +++NK ++Q ++P
Sbjct: 353 AEQTVPQSQFTINKQQTDIQQRLKP 377
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/68 (60%), Positives = 49/68 (72%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
TI+PI VH+I +GQVI DL S VKELVENSLDAGATSIE+ K G + +V DNG
Sbjct: 3 TIKPIEGRSVHQIQSGQVIVDLCSVVKELVENSLDAGATSIEVRFKNDGLDSIEVQDNGS 62
Query: 71 GISPNNFK 78
GI P N++
Sbjct: 63 GIDPQNYE 70
>gi|149240297|ref|XP_001526024.1| hypothetical protein LELG_02582 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450147|gb|EDK44403.1| hypothetical protein LELG_02582 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 948
Score = 183 bits (464), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 89/200 (44%), Positives = 128/200 (64%), Gaps = 12/200 (6%)
Query: 610 RKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLK 669
+K DF MK+IGQFNLGFI+ +LFI+DQHA+DEK+NFERL ++ +N QPL+ PL
Sbjct: 748 KKTDFLDMKLIGQFNLGFILVCHGSNLFIIDQHASDEKFNFERLLETFAVNYQPLITPLF 807
Query: 670 LDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIS 729
+DL +E++ H I + NGF + D AG + L ++P K I F V+D +LI+
Sbjct: 808 VDLNVIDEMLVLDHEQIFQNNGFKISVDYDKPAGAKISLTSLPVYKNIMFSVDDFYELIN 867
Query: 730 TLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLA 789
+ + +I C S++R ++A +ACRSSIMIG L + MQK++ +L+
Sbjct: 868 LINEQPSNRNI-----------KC-SKIRKIVAMKACRSSIMIGSFLSKQRMQKVVANLS 915
Query: 790 DLNSPWNCPHGRPTMRHLVD 809
L+ PWNCPHGRPTMRHL++
Sbjct: 916 KLDKPWNCPHGRPTMRHLIE 935
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 103/199 (51%), Gaps = 10/199 (5%)
Query: 48 ATSIEIALKEYGEEWFQVVDNGCGISPNNFKVRAVFLCQAYALIAKGVRFVCTNTT-GKN 106
+IE K++ W + N S F F+ Y LI ++F TN GK
Sbjct: 150 VVTIESIFKKFPVRWKNFIKN----SKKEFHKTVSFITN-YLLIYPTIKFEVTNVNNGK- 203
Query: 107 VKSVVLKTQG--SSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNL 164
+S++L ++G +++ +N+I++FG N L + + + + G +S G GR+
Sbjct: 204 -RSLILSSRGGENNTSTENLISIFGTNGNTNLLEINLQINKDISIAGHISSYSFGLGRST 262
Query: 165 GDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVF 224
DRQ+ FVN RP+ K++K++NE+YK N Q+P+ I+N + A DVN+ PDK V
Sbjct: 263 QDRQFLFVNKRPIVYKKLAKIINEIYKSFNHVQFPVYILNLDINPEAIDVNLLPDKTSVL 322
Query: 225 FSDECSILHALREGLQEIY 243
+E +L +RE L Y
Sbjct: 323 VHNEDKVLELIRESLITFY 341
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 43/67 (64%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
+I+ IN + +I +GQVI DL S VKELVEN++DA A I + YG + V DNG
Sbjct: 2 SIQGINATDISKITSGQVIIDLRSIVKELVENAIDASAKKILVNFANYGIDSITVQDNGK 61
Query: 71 GISPNNF 77
GIS N+F
Sbjct: 62 GISENDF 68
>gi|327355152|gb|EGE84009.1| DNA mismatch repair protein [Ajellomyces dermatitidis ATCC 18188]
Length = 1067
Score = 182 bits (463), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 98/234 (41%), Positives = 137/234 (58%), Gaps = 23/234 (9%)
Query: 600 AATTELERLFRKEDFGRMKVIGQFNLGFII---------------GKLDQDLFIVDQHAA 644
+A T+L KEDF +M++IGQFNLGFII G ++FI+DQHA+
Sbjct: 792 SAETQLSLSVSKEDFAKMRIIGQFNLGFIIATRPRGDSNNPSTLPGHKHDEVFIIDQHAS 851
Query: 645 DEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEED--PHALA 702
DEKYNFERL TV+ Q L++P L+LT EE + ++ + KNGF +E D +
Sbjct: 852 DEKYNFERLQAETVVQNQRLVKPKTLELTAVEEEIIIDNLPALEKNGFVVEVDRSGNEPI 911
Query: 703 GLRFRLKAVPFSKKITFGVEDVKDLISTLADN-----QGECSIISSYKMDTADSVC-PSR 756
G R +L ++P SK++ F D+++LI L + Q S S + + PS+
Sbjct: 912 GRRCKLTSLPLSKEVVFNTGDLEELIVLLGETPQIQTQSAPSPTSGSDVFAGKYIPRPSK 971
Query: 757 VRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
VR M A RACRSSIMIG L +M +++ H+ ++ PWNCPHGRPTMRHL+ L
Sbjct: 972 VRKMFAMRACRSSIMIGKTLTTKQMDRVVRHMGMIDRPWNCPHGRPTMRHLMSL 1025
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 94/182 (51%), Gaps = 18/182 (9%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
+ + L AYA ++ GVRF N K +V TQ +++ K+NI ++G L P+
Sbjct: 175 KVLGLLHAYACVSTGVRFNVKNQMPKGKSVLVFATQSNATTKENISNIYGAKTLLSLTPL 234
Query: 140 AI-----------C-------KSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPK 181
+ C + + V+G +SKP G GR DRQ FFVN RP LP+
Sbjct: 235 DLELEFQPSGTGRCLIGGGSNEGNKILVQGHISKPVFGEGRQTPDRQMFFVNSRPCALPQ 294
Query: 182 VSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQE 241
++K NE+YK N Q P +F + T + DVNV+PDKR + D +++ +L+ L E
Sbjct: 295 IAKAFNEVYKSFNISQSPFIFADFKMDTNSYDVNVSPDKRTILLHDAGALIESLKTSLTE 354
Query: 242 IY 243
++
Sbjct: 355 LF 356
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 53/75 (70%)
Query: 8 NSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVD 67
N TI+ I VH+I +GQVI DL S VKELVENSLDAGATS++I K G + +V D
Sbjct: 2 NMATIKAIEARSVHQIQSGQVIVDLCSVVKELVENSLDAGATSLDIRFKNNGLDLIEVQD 61
Query: 68 NGCGISPNNFKVRAV 82
NG GISP++++ A+
Sbjct: 62 NGKGISPDDYETVAL 76
>gi|239615471|gb|EEQ92458.1| DNA mismatch repair protein [Ajellomyces dermatitidis ER-3]
Length = 1065
Score = 182 bits (463), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 98/234 (41%), Positives = 137/234 (58%), Gaps = 23/234 (9%)
Query: 600 AATTELERLFRKEDFGRMKVIGQFNLGFII---------------GKLDQDLFIVDQHAA 644
+A T+L KEDF +M++IGQFNLGFII G ++FI+DQHA+
Sbjct: 790 SAETQLSLSVSKEDFAKMRIIGQFNLGFIIATRPRGDSNNPSTLPGHKHDEVFIIDQHAS 849
Query: 645 DEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEED--PHALA 702
DEKYNFERL TV+ Q L++P L+LT EE + ++ + KNGF +E D +
Sbjct: 850 DEKYNFERLQAETVVQNQRLVKPKTLELTAVEEEIIIDNLPALEKNGFVVEVDRSGNEPI 909
Query: 703 GLRFRLKAVPFSKKITFGVEDVKDLISTLADN-----QGECSIISSYKMDTADSVC-PSR 756
G R +L ++P SK++ F D+++LI L + Q S S + + PS+
Sbjct: 910 GRRCKLTSLPLSKEVVFNTGDLEELIVLLGETPQIQTQSAPSPTSGSDVFAGKYIPRPSK 969
Query: 757 VRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
VR M A RACRSSIMIG L +M +++ H+ ++ PWNCPHGRPTMRHL+ L
Sbjct: 970 VRKMFAMRACRSSIMIGKTLTTKQMDRVVRHMGMIDRPWNCPHGRPTMRHLMSL 1023
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 94/182 (51%), Gaps = 18/182 (9%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
+ + L AYA ++ GVRF N K +V TQ +++ K+NI ++G L P+
Sbjct: 173 KVLGLLHAYACVSTGVRFNVKNQMPKGKSVLVFATQSNATTKENISNIYGAKTLLSLTPL 232
Query: 140 AI-----------C-------KSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPK 181
+ C + + V+G +SKP G GR DRQ FFVN RP LP+
Sbjct: 233 DLELEFQPSGTGRCLIGGGSNEGNKILVQGHISKPVFGEGRQTPDRQMFFVNSRPCALPQ 292
Query: 182 VSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQE 241
++K NE+YK N Q P +F + T + DVNV+PDKR + D +++ +L+ L E
Sbjct: 293 IAKAFNEVYKSFNISQSPFIFADFKMDTNSYDVNVSPDKRTILLHDAGALIESLKTSLTE 352
Query: 242 IY 243
++
Sbjct: 353 LF 354
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 52/72 (72%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
TI+ I VH+I +GQVI DL S VKELVENSLDAGATS++I K G + +V DNG
Sbjct: 3 TIKAIEARSVHQIQSGQVIVDLCSVVKELVENSLDAGATSLDIRFKNNGLDLIEVQDNGK 62
Query: 71 GISPNNFKVRAV 82
GISP++++ A+
Sbjct: 63 GISPDDYETVAL 74
>gi|408391257|gb|EKJ70637.1| hypothetical protein FPSE_09147 [Fusarium pseudograminearum CS3096]
Length = 1006
Score = 182 bits (463), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 102/244 (41%), Positives = 137/244 (56%), Gaps = 32/244 (13%)
Query: 598 LAAATTE--LERLFRKEDFGRMKVIGQFNLGFIIGK-------------LDQD-LFIVDQ 641
LAAA E L ++DF RM++ GQFN+GFII D D LFI+DQ
Sbjct: 759 LAAANAEDKLSLAIARKDFLRMRIAGQFNMGFIIASRPASMRSGEELEAADNDELFIIDQ 818
Query: 642 HAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHA- 700
HA DEKYNFERL + + Q L+ P +L+LT EE + ++ I NGF + D
Sbjct: 819 HATDEKYNFERLQEVQTVQSQRLVHPKRLELTALEEEIILQNIPAIEANGFKVHVDMSGD 878
Query: 701 -LAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRA 759
G R + A+P S+++TF + D ++LI+ L + E I PS+VR
Sbjct: 879 EPVGSRCEVLALPMSREVTFSLADFEELIALLGEESSESKHIPR----------PSKVRK 928
Query: 760 MLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKNIDE 819
M ASRACRSS+MIG AL +M+ ++ H+A+L+ PWNCPHGRPTMRHL L + D
Sbjct: 929 MFASRACRSSVMIGKALTHGQMETLVRHMAELDKPWNCPHGRPTMRHLCRLDS----WDS 984
Query: 820 NGAG 823
G G
Sbjct: 985 KGWG 988
Score = 112 bits (280), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 89/184 (48%), Gaps = 20/184 (10%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
+ + L YA I ++F + K + + T+G+ + ++NII +FG L P+
Sbjct: 173 KVIALLGQYACIQTKMKFSVSQQPSKGKRIQMFSTKGNPTTRENIINIFGAKTMTVLVPL 232
Query: 140 AIC--------------------KSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDL 179
+C S +V G +S+P G GR DRQ FFVN RP L
Sbjct: 233 ELCLEMQPSTVSPALRVESDKDSTSKEVRVVGHVSRPSHGDGRQTPDRQMFFVNGRPCGL 292
Query: 180 PKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGL 239
P+ +K NE+YK N+ Q P + + + T DVNV+PDKR + D+ +L LR L
Sbjct: 293 PQFAKAFNEVYKSYNNTQTPFILADIQLDTHMYDVNVSPDKRSILLHDQNQLLDNLRTAL 352
Query: 240 QEIY 243
+++
Sbjct: 353 TDLF 356
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 50/67 (74%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
TI+ I+ VH+I +GQVI DL S VKELVENS+D+GATSI++ K G + +V DNG
Sbjct: 3 TIKQIDGRTVHQIQSGQVIVDLCSVVKELVENSVDSGATSIDVRFKNQGLDLIEVADNGS 62
Query: 71 GISPNNF 77
GI+P+N+
Sbjct: 63 GIAPDNY 69
>gi|46110094|ref|XP_382105.1| hypothetical protein FG01929.1 [Gibberella zeae PH-1]
Length = 1003
Score = 182 bits (463), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 102/244 (41%), Positives = 137/244 (56%), Gaps = 32/244 (13%)
Query: 598 LAAATTE--LERLFRKEDFGRMKVIGQFNLGFIIGK-------------LDQD-LFIVDQ 641
LAAA E L ++DF RM++ GQFN+GFII D D LFI+DQ
Sbjct: 756 LAAANAEDKLSLTIARKDFLRMRIAGQFNMGFIIASRPASMRSGEELEAADNDELFIIDQ 815
Query: 642 HAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHA- 700
HA DEKYNFERL + + Q L+ P +L+LT EE + ++ I NGF + D
Sbjct: 816 HATDEKYNFERLQEVQTVQSQRLVHPKRLELTALEEEIILQNIPAIEANGFKVHVDMSGD 875
Query: 701 -LAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRA 759
G R + A+P S+++TF + D ++LI+ L + E I PS+VR
Sbjct: 876 EPVGSRCEVLALPMSREVTFSLADFEELIALLGEESSESKHIPR----------PSKVRK 925
Query: 760 MLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKNIDE 819
M ASRACRSS+MIG AL +M+ ++ H+A+L+ PWNCPHGRPTMRHL L + D
Sbjct: 926 MFASRACRSSVMIGKALTHGQMETLVRHMAELDKPWNCPHGRPTMRHLCRL----DSWDS 981
Query: 820 NGAG 823
G G
Sbjct: 982 KGWG 985
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 89/184 (48%), Gaps = 20/184 (10%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
+ + L YA I ++F + K + + T+G+ + ++NII +FG L P+
Sbjct: 173 KVIALLGQYACIQTNMKFSVSQQPSKGKRIQMFSTKGNPTTRENIINIFGAKTMTVLVPL 232
Query: 140 AIC--------------------KSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDL 179
+C S +V G +S+P G GR DRQ FFVN RP L
Sbjct: 233 ELCLEMQPSTVSPALRVGSDNDSTSKEVRVVGHVSRPSHGDGRQTPDRQMFFVNGRPCGL 292
Query: 180 PKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGL 239
P+ +K NE+YK N+ Q P + + + T DVNV+PDKR + D+ +L LR L
Sbjct: 293 PQFAKAFNEVYKSYNNTQTPFILADIQLDTHMYDVNVSPDKRSILLHDQNQLLDNLRAAL 352
Query: 240 QEIY 243
+++
Sbjct: 353 TDLF 356
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 50/67 (74%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
TI+ I+ VH+I +GQVI DL S VKELVENS+D+GATSI++ K G + +V DNG
Sbjct: 3 TIKQIDGRTVHQIQSGQVIVDLCSVVKELVENSVDSGATSIDVRFKNQGLDLIEVADNGS 62
Query: 71 GISPNNF 77
GI+P+N+
Sbjct: 63 GIAPDNY 69
>gi|302881957|ref|XP_003039889.1| hypothetical protein NECHADRAFT_50420 [Nectria haematococca mpVI
77-13-4]
gi|256720756|gb|EEU34176.1| hypothetical protein NECHADRAFT_50420 [Nectria haematococca mpVI
77-13-4]
Length = 1021
Score = 182 bits (463), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 98/238 (41%), Positives = 137/238 (57%), Gaps = 26/238 (10%)
Query: 589 ENEERKARALAAATTELERLFRKEDFGRMKVIGQFNLGFIIG------------KLDQ-- 634
+ EE A A +L ++DF +M++ GQFNLGFII +L +
Sbjct: 771 DGEEVTDLGAADAEEKLSLTIARKDFLKMRIAGQFNLGFIIAVRPAQARSDDELELSEHD 830
Query: 635 DLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSL 694
+LFIVDQHA DEKYNFERL Q+ + Q L+ P +L+LT EE + ++ I NGF +
Sbjct: 831 ELFIVDQHATDEKYNFERLQQAQTVQSQRLVHPKRLELTALEEEIVMQNISAIEANGFKV 890
Query: 695 EEDPHA--LAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSV 752
D G R + A+P S+++TF + D ++LI+ L + E +
Sbjct: 891 HVDMSGDEPVGSRCEVLALPMSREVTFTLTDFEELIALLGEESSESKHVPR--------- 941
Query: 753 CPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
PS+VR M ASRACRSS+MIG L + +M+ ++ H+ADL+ PWNCPHGRPTMRHL L
Sbjct: 942 -PSKVRKMFASRACRSSVMIGKPLTQGQMETLVRHMADLDKPWNCPHGRPTMRHLCQL 998
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 97/203 (47%), Gaps = 23/203 (11%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
+ + L YA I ++F + K + + T+G+ + +DNII +FG L P+
Sbjct: 173 KVIALLNQYACIQTNLKFSVSQQPTKGKRMQLFSTKGNPTTRDNIINIFGAKTMTVLVPL 232
Query: 140 AI--------------------CKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDL 179
+ S ++ G +S+P G GR DRQ FFVN RP L
Sbjct: 233 DLKLEMQPSKVSPALQSDVKDSGSSKEVRIVGHVSRPSHGDGRQTPDRQMFFVNGRPCGL 292
Query: 180 PKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGL 239
P+ +K NE+Y+ N+ Q P + + + T DVNV+PDKR + D+ +L LR L
Sbjct: 293 PQFAKAFNEVYRSYNASQSPFILADIQLDTHMYDVNVSPDKRSILLHDQNELLDNLRTSL 352
Query: 240 QEIYSPNNASYSVNKVEQLIEPE 262
+++ N YSV QL+ P+
Sbjct: 353 TDLFDSQN--YSV-PTAQLMTPK 372
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 49/67 (73%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
TI+ I+ VH+I +GQVI DL S VKELVENS+DAGATSI++ K G + +V DNG
Sbjct: 3 TIKQIDGRTVHQIQSGQVIVDLCSVVKELVENSVDAGATSIDVRFKNQGLDLIEVADNGS 62
Query: 71 GISPNNF 77
GI+P N+
Sbjct: 63 GIAPANY 69
>gi|392868507|gb|EAS34304.2| DNA mismatch repair protein MutL [Coccidioides immitis RS]
Length = 1026
Score = 182 bits (463), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 98/236 (41%), Positives = 139/236 (58%), Gaps = 25/236 (10%)
Query: 600 AATTELERLFRKEDFGRMKVIGQFNLGFIIG-------------KLDQDLFIVDQHAADE 646
+A T L K+DF +M+V+GQFNLGFI+ +LFI+DQHA+DE
Sbjct: 741 SAETRLSLTVSKDDFAKMRVVGQFNLGFILAIRPGTDSTDFQDNPTKDELFIIDQHASDE 800
Query: 647 KYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHA--LAGL 704
KYNFERL TV+ Q L+RP LDLT EE V ++ + KNGF ++ D G
Sbjct: 801 KYNFERLQAETVVQNQRLVRPKTLDLTAVEEEVIIDNIPTLEKNGFIVDIDTSGDEPIGR 860
Query: 705 RFRLKAVPFSKKITFGVEDVKDLISTLADN-------QGECSI---ISSYKMDTADSVCP 754
R +L ++P SK++ F D+++LI L+++ QG+ + SS + P
Sbjct: 861 RCKLISLPLSKEVVFNTRDLEELIVLLSESPQHHRAPQGDGDVDPASSSSQFTNLYVPRP 920
Query: 755 SRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
+VR M A RACRSSIMIG +L +M++++ H+ ++ PWNCPHGRPTMRHL+ L
Sbjct: 921 GKVRKMFAMRACRSSIMIGKSLTVKQMERVVRHMGMIDKPWNCPHGRPTMRHLMSL 976
Score = 117 bits (292), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 93/182 (51%), Gaps = 18/182 (9%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCL--- 136
+ + L AYA I+ GVRF N K VV T+ + + K+NI V+G L
Sbjct: 175 KVLGLLHAYACISTGVRFNVKNQMPKGKSVVVFATKSNPTTKENISNVYGAKTLLALIPL 234
Query: 137 ------EPVAICKS---------DSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPK 181
EP A K+ + V G++SKP G GR DRQ FFVN RP LP+
Sbjct: 235 DLELEFEPSAESKTSRRQQDGLVNKIFVHGYISKPVFGEGRQTPDRQMFFVNSRPCGLPQ 294
Query: 182 VSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQE 241
+++ NE+Y+ N Q P NF + T A DVNV+PDKR + D +++ +L+ L E
Sbjct: 295 IARAFNEVYRSFNISQSPFIFANFEMNTNAYDVNVSPDKRTILLHDAGALIESLKTSLTE 354
Query: 242 IY 243
++
Sbjct: 355 LF 356
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 50/71 (70%)
Query: 8 NSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVD 67
N TI+ I +H+I +GQVI DL S VKELVENSLDAGATSI+I K G + +V D
Sbjct: 2 NMATIKAIEARSIHQIQSGQVIVDLCSVVKELVENSLDAGATSIDIRFKNNGLDLIEVQD 61
Query: 68 NGCGISPNNFK 78
NG GI PNN++
Sbjct: 62 NGHGIPPNNYE 72
>gi|327303696|ref|XP_003236540.1| DNA mismatch repair protein [Trichophyton rubrum CBS 118892]
gi|326461882|gb|EGD87335.1| DNA mismatch repair protein [Trichophyton rubrum CBS 118892]
Length = 1038
Score = 182 bits (461), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 102/252 (40%), Positives = 139/252 (55%), Gaps = 41/252 (16%)
Query: 600 AATTELERLFRKEDFGRMKVIGQFNLGFIIG------------------KLDQDLFIVDQ 641
A T+L K+DFGRM++IGQFNLGFI+ ++ +LFI+DQ
Sbjct: 748 APETKLSLAVSKKDFGRMRIIGQFNLGFILATRPRVTEDDNSSLSPSAEQVQDELFIIDQ 807
Query: 642 HAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHA- 700
HA+DEKYNFERL T + Q L++P LDLT EE V ++ + KNGF +E D
Sbjct: 808 HASDEKYNFERLQAETTVQNQRLVKPKTLDLTAVEEEVIIDNLAALEKNGFIVEIDTSGD 867
Query: 701 -LAGLRFRLKAVPFSKKITFGVEDVKDLISTLADN-QGECSIISSYKMDTADSVC----- 753
G R +L ++P SK++ F D+++LI L++ Q S + D DS
Sbjct: 868 EPIGRRCKLISLPLSKEVVFDTRDLEELIVLLSEAPQQSQSNLGKRARDELDSDAEHIEP 927
Query: 754 ---------------PSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCP 798
PS+VR M A RACRSSIMIG L +M+ +++H+ ++ PWNCP
Sbjct: 928 SGVASSPFSDYLVPRPSKVRKMFAMRACRSSIMIGKNLTHRQMETVVKHMGTIDKPWNCP 987
Query: 799 HGRPTMRHLVDL 810
HGRPTMRHLV L
Sbjct: 988 HGRPTMRHLVSL 999
Score = 119 bits (299), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 97/191 (50%), Gaps = 15/191 (7%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCL--- 136
+ + L AYA I+ GVRF N K VV T+ + + ++NI V+G L
Sbjct: 154 KVIALLHAYACISTGVRFNVKNQMPKGKSVVVFTTKSNPTTRENISNVYGAKTLLALMPL 213
Query: 137 ------EPVAICK------SDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSK 184
EP K S+ V G +SKP G GR DRQ FFVN RP LP+++K
Sbjct: 214 DLGLEYEPSTAAKRFSSQASNKIFVHGHISKPVFGEGRQTPDRQMFFVNSRPCGLPQIAK 273
Query: 185 LVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYS 244
NE+YK N Q P NF + T A DVNV+PDKR + D +++ +L+ L E++
Sbjct: 274 AFNEVYKSFNLSQSPFIFANFEMDTSAYDVNVSPDKRTILLHDAGALIESLKASLTELFE 333
Query: 245 PNNASYSVNKV 255
+ + V+++
Sbjct: 334 NEDQTVPVSQL 344
Score = 43.1 bits (100), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 19/72 (26%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
TI+PI VH+I +GQVI DL + K G + +V DNG
Sbjct: 3 TIKPIEARSVHQIQSGQVIVDLY-------------------VRFKNNGLDLIEVQDNGH 43
Query: 71 GISPNNFKVRAV 82
GISPNN++ A+
Sbjct: 44 GISPNNYESLAL 55
>gi|111380661|gb|ABH09707.1| PMS1-like protein [Talaromyces marneffei]
Length = 1403
Score = 182 bits (461), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 93/215 (43%), Positives = 132/215 (61%), Gaps = 19/215 (8%)
Query: 611 KEDFGRMKVIGQFNLGFIIG-----------KLDQDLFIVDQHAADEKYNFERLSQSTVL 659
K+DF +M+++GQFNLGFI+ + +LFI+DQHA+DEKYNFERL TV+
Sbjct: 1141 KDDFAKMRIVGQFNLGFILAIRSHGADEPTASAEDELFIIDQHASDEKYNFERLQAETVV 1200
Query: 660 NQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHA--LAGLRFRLKAVPFSKKI 717
Q L+ P LDLT EE + + + KNGF +E D G R +L ++P SK++
Sbjct: 1201 QNQRLVHPKTLDLTAVEEEIIRENKLALEKNGFVIEVDDSGNEPIGRRCKLVSLPLSKEV 1260
Query: 718 TFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCP--SRVRAMLASRACRSSIMIGDA 775
F + D+++LI L+ E ++ T+D+ P S+VR M A RACRSSIMIG
Sbjct: 1261 VFDIRDLEELIVLLS----EAPTSATRNATTSDTYIPRPSKVRKMFAMRACRSSIMIGKT 1316
Query: 776 LGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
L +M+K + ++ ++ PWNCPHGRPTMRHL+ L
Sbjct: 1317 LTVKQMEKAVRNMGTIDKPWNCPHGRPTMRHLMSL 1351
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 111/205 (54%), Gaps = 23/205 (11%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCL--- 136
+ + L YA I+ GVRF NT K + V+L T+ ++S++DNI V+G L
Sbjct: 565 KVINLLNEYACISTGVRFSVKNTDSKKRQLVLLTTKANASIRDNIANVYGAKTLLTLIPL 624
Query: 137 ------EPVAICKS-----DSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKL 185
EP A K + V G++S+P G GR DRQ ++VN RP +P+++K
Sbjct: 625 ELELEFEPSATGKRLNRDLNKIHVRGYVSRPVVGEGRGTRDRQMYYVNSRPCGIPQIAKA 684
Query: 186 VNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIY-- 243
NE+YK N Q P + +F + T A DVNV+PDKR + D +++ +L+E L +++
Sbjct: 685 FNEVYKTYNISQAPFVLADFQMDTNAYDVNVSPDKRTILLHDSAALIESLKEALDQMFQD 744
Query: 244 ---SPNNASYSVNK----VEQLIEP 261
+ + +++NK ++Q ++P
Sbjct: 745 AEQTVPQSQFTINKQQTDIQQRLKP 769
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/59 (62%), Positives = 44/59 (74%)
Query: 20 VHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFK 78
VH+I +GQVI DL S VKELVENSLDAGATSIE+ K G + +V DNG GI P N++
Sbjct: 404 VHQIQSGQVIVDLCSVVKELVENSLDAGATSIEVRFKNDGLDSIEVQDNGSGIDPQNYE 462
>gi|358341825|dbj|GAA49406.1| DNA mismatch repair protein PMS2 [Clonorchis sinensis]
Length = 780
Score = 182 bits (461), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 89/210 (42%), Positives = 132/210 (62%), Gaps = 13/210 (6%)
Query: 601 ATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLN 660
A +EL F K F ++++GQFNLGFI+ + QDLFI+DQHA+DEKY FE+L ++
Sbjct: 579 AESELSTYFDKATFNELQIVGQFNLGFIVARHAQDLFIIDQHASDEKYRFEQLFENYRFT 638
Query: 661 QQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFG 720
QPL+ P L+L+ +E + ++D+ KNGF+ D ++ G + +L A P + FG
Sbjct: 639 CQPLVVPQALELSVAQEQLLLNNLDVFAKNGFAFRVDENSPCGRQVQLVATPMLEGHIFG 698
Query: 721 VEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNE 780
D+++++ L+++ CS PSR+R +LASRACRS+IMIG AL +
Sbjct: 699 RSDIEEMLFVLSES---CS----------RRCRPSRLRTILASRACRSAIMIGTALDHAK 745
Query: 781 MQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
MQ+I+ ++ + PWNCPHGRPTMRHL L
Sbjct: 746 MQRIVRNMGTMVHPWNCPHGRPTMRHLFHL 775
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 58/86 (67%), Gaps = 1/86 (1%)
Query: 10 PTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNG 69
P I + V+H IC+GQV+ L+SAVKELVENS+DAGAT I++ LKE+G E +V+DNG
Sbjct: 8 PRIHALEDNVIHSICSGQVVVTLASAVKELVENSIDAGATKIDVRLKEFGSESIEVIDNG 67
Query: 70 CGISPNNFKVRAVF-LCQAYALIAKG 94
GI +F+ +V L YA + G
Sbjct: 68 TGIIERDFEAISVLVLGPTYAFVLAG 93
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 88/206 (42%), Gaps = 53/206 (25%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNC---L 136
R V L AY L++ GV+ C + K V+ +SSLKDNI V+G + + L
Sbjct: 193 RTVNLLTAYCLVSVGVQISCVRISKNGEKIPVVSNGSASSLKDNIFGVYGQSQASTLLEL 252
Query: 137 EPVAICKSD--------------SCKVEGFLSKP------------------GQGSGRNL 164
P + SD S + GF++KP R+
Sbjct: 253 TPTSSIPSDILDEFNVNDAVEFGSISISGFITKPSTLQSADASSPSASSKGRAASGARST 312
Query: 165 GDRQYFFVNDRPVDLPKVSKLVNELYKGAN------------------SRQYPIAIMNFI 206
DRQ+ +VN RP +LP+V++LV ++++ + S +P ++
Sbjct: 313 SDRQFIYVNGRPCELPRVARLVTDVWRRCSKEALAVSNDGLQMPASNASTAFPFFVLMLQ 372
Query: 207 VPTRACDVNVTPDKRKVFFSDECSIL 232
+PT D+N+TPDKR + E +L
Sbjct: 373 MPTGTVDINLTPDKRTLLLHHERYVL 398
>gi|448111660|ref|XP_004201894.1| Piso0_001357 [Millerozyma farinosa CBS 7064]
gi|359464883|emb|CCE88588.1| Piso0_001357 [Millerozyma farinosa CBS 7064]
Length = 968
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 92/211 (43%), Positives = 129/211 (61%), Gaps = 11/211 (5%)
Query: 601 ATTELERLFRKEDFGRMKVIGQFNLGFIIGKLD-QDLFIVDQHAADEKYNFERLSQSTVL 659
A +L K DF +MK+IGQFNLGF++ L+ +LFI+DQHA+DEKYNFERL+ +TV
Sbjct: 755 AQDKLAYTISKSDFSKMKLIGQFNLGFVLVTLNSNNLFIIDQHASDEKYNFERLNSNTVF 814
Query: 660 NQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITF 719
Q L+ P L+L +E+ +M+ RKNGF L + G R +L A+P S+ +TF
Sbjct: 815 KSQHLVIPQVLELNIIDEMTVMDNMEAFRKNGFVLSINEENSPGRRIQLLALPNSESVTF 874
Query: 720 GVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRN 779
D +L+ +I++ S+ S++RA+ A RACR SIMIG L R
Sbjct: 875 DTGDFYELL----------HLINTGNTANPGSIRCSKIRALFAMRACRGSIMIGQHLSRK 924
Query: 780 EMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
M ++ +L L+ PWNCPHGRPTMRHL++L
Sbjct: 925 TMSNVIRNLGLLDKPWNCPHGRPTMRHLIEL 955
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 94/177 (53%), Gaps = 21/177 (11%)
Query: 88 YALIAKGVRFVCTNTTGKNVK-SVVLKTQGSS--SLKDNIITVFGMNIYNCLEPVAICKS 144
Y LI VRF N K K ++VL TQG+S ++ D++I++FG N L PV I
Sbjct: 181 YMLIHPNVRFSVNNINSKTKKKTLVLGTQGTSKSTILDSMISIFGTNGAYGLVPVDIEVQ 240
Query: 145 D------------------SCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLV 186
D + K G++S G GR+ DRQY F+N RP+ K K +
Sbjct: 241 DLEMKLKLHIGEFPVTQKLNIKFAGYISNSSFGLGRSASDRQYVFINGRPISSKKFLKTI 300
Query: 187 NELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIY 243
NE+YK N QYP+ ++N I+ T+ DVNVTPDKR + +E + L++ L +++
Sbjct: 301 NEVYKSYNHVQYPVVVLNIIIDTKFLDVNVTPDKRTILIHNENIVHDVLKDELSKLF 357
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 35/48 (72%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYG 59
I+ I +HRI +GQVI DL S VKELVENSLDA + +I+I ++YG
Sbjct: 3 IKNIQSTDIHRITSGQVIVDLVSIVKELVENSLDANSNTIDITFRDYG 50
>gi|393214035|gb|EJC99529.1| hypothetical protein FOMMEDRAFT_38738, partial [Fomitiporia
mediterranea MF3/22]
Length = 242
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 99/240 (41%), Positives = 139/240 (57%), Gaps = 40/240 (16%)
Query: 600 AATTELERLFRKEDFGRMKVIGQFNLGFIIGK-------------------LD------- 633
+A EL R+ KEDF M++IGQFNLGFII + LD
Sbjct: 11 SAERELARVIDKEDFSSMEIIGQFNLGFIIARRRLRGKKPSVQSSDDSQTGLDSSANAEL 70
Query: 634 QDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGF- 692
DLFI+DQHAADEKYNFE L Q+T ++ Q L +P L+LT +E++A ++DI++ NGF
Sbjct: 71 DDLFIIDQHAADEKYNFETLQQTTRIDSQRLYKPRPLELTAADELLALENIDILKSNGFE 130
Query: 693 -SLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADS 751
+++ED G R +L A P S F ++D+++L+ + D ++
Sbjct: 131 VTVDEDAEPSQG-RIKLVAQPVSGSTNFDMKDLEELLHLMQDKPAGQKMVR--------- 180
Query: 752 VCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLT 811
C S+ RAM A RACR S+MIG AL ++M I+ H+ ++ PWNCPHGRPTMRHL L+
Sbjct: 181 -C-SKARAMFAMRACRKSVMIGMALNNSQMVSIVRHMGTMDQPWNCPHGRPTMRHLTSLS 238
>gi|170063399|ref|XP_001867088.1| DNA mismatch repair protein pms1 [Culex quinquefasciatus]
gi|167881032|gb|EDS44415.1| DNA mismatch repair protein pms1 [Culex quinquefasciatus]
Length = 860
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 93/197 (47%), Positives = 122/197 (61%), Gaps = 14/197 (7%)
Query: 600 AATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVL 659
AA EL+ KE FG+M++IGQFNLGFII +LD DLFI+DQHA DEKYNFE L ++TVL
Sbjct: 641 AAEDELQMEITKEKFGKMEIIGQFNLGFIIARLDADLFIIDQHATDEKYNFEDLQRNTVL 700
Query: 660 NQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITF 719
Q L+ P L+LT E++ ++I NGF E D A + +L A PFSK F
Sbjct: 701 QNQKLVVPQPLELTAVNEMILMDSLEIFEMNGFQFEVDGGAEPTKKIKLVAKPFSKNWEF 760
Query: 720 GVEDVKDLISTLADNQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGR 778
G ED+ +LI L D ++VC PSRVR+M ASRACR S+MIG AL
Sbjct: 761 GKEDIDELIFMLQDA-------------VPNTVCRPSRVRSMFASRACRKSVMIGKALTV 807
Query: 779 NEMQKILEHLADLNSPW 795
EM++++ H+ ++ PW
Sbjct: 808 AEMRRLVTHMGEIEQPW 824
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 86/174 (49%), Gaps = 29/174 (16%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGM------------- 130
+ QAY L++ GVR +CTN K K VV+ TQG+ S+ DNI TVFG
Sbjct: 193 ILQAYCLVSTGVRIICTNQKKKGQKEVVMSTQGTGSVLDNITTVFGTKQAAELVQLKQAI 252
Query: 131 ----------------NIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVND 174
NI E V +EG++S GSGR+ DRQ+FFVN
Sbjct: 253 GTNGKILDLNESDFDENISMTQEEVDSLNLSRYTIEGYISSCAHGSGRSARDRQFFFVNS 312
Query: 175 RPVDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDE 228
RP + ++ KLVNE Y N+ P +N + DVN+TPDKR++ ++E
Sbjct: 313 RPCEPKQIIKLVNETYHKYNASHTPFVFLNLKMDRADVDVNLTPDKRQLLMNNE 366
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 59/80 (73%), Gaps = 2/80 (2%)
Query: 1 MDVETPT--NSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEY 58
M V TPT +S I I++ VHRIC+GQV+ +L+ AVKELVENS+DAGAT +E+ LK+Y
Sbjct: 8 MIVPTPTAADSKKITAIDRDTVHRICSGQVVLNLAIAVKELVENSIDAGATVVEVKLKDY 67
Query: 59 GEEWFQVVDNGCGISPNNFK 78
G E +VVDNG G+ NF+
Sbjct: 68 GAELVEVVDNGSGVEQRNFE 87
>gi|401623858|gb|EJS41939.1| pms1p [Saccharomyces arboricola H-6]
Length = 879
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 96/226 (42%), Positives = 134/226 (59%), Gaps = 16/226 (7%)
Query: 590 NEERKARALAAATTELERLFRKEDFGRMKVIGQFNLGFII-----GKLDQDLFIVDQHAA 644
N + K L K+DF +M+V+GQFNLGFII G D DLFIVDQHA+
Sbjct: 653 NNKEKLEDFEKGEKYLTLTVSKDDFKKMEVVGQFNLGFIIVTRKIGDKD-DLFIVDQHAS 711
Query: 645 DEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGL 704
DEKYNFE L TV Q L+ P +DL+ +E+V ++ + KNGF L+ D G
Sbjct: 712 DEKYNFETLQAVTVFKSQKLIIPQPVDLSVIDELVVLDNLPVFEKNGFKLKIDEEEEFGS 771
Query: 705 RFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASR 764
R +L ++P SK+ F ++D +LI + ++ G D++ S++R+M A R
Sbjct: 772 RIKLLSLPSSKQTLFDLDDFNELIHLIKEDGGL----------RRDNIRCSKIRSMFAMR 821
Query: 765 ACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
ACRSSIMIG L + M +++ +L+ L+ PWNCPHGRPTMRHL +L
Sbjct: 822 ACRSSIMIGKPLNKKTMTRVVHNLSGLDKPWNCPHGRPTMRHLTEL 867
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 95/187 (50%), Gaps = 22/187 (11%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLE-- 137
+ + + Q YA+I GV+F N T K K+++L T S+++ NI ++FG N LE
Sbjct: 171 KCLTVLQGYAVINAGVKFSVWNITAKGKKNLILSTMKISNMRKNISSIFGANGMRGLEEV 230
Query: 138 --------------------PVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPV 177
P + KV+G++S+ G GRN DRQ+ FVN RPV
Sbjct: 231 DLDLDLNPFKKRMLRKYNDDPDFLNLDYRIKVKGYMSQNSFGCGRNSKDRQFVFVNKRPV 290
Query: 178 DLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALRE 237
+ P K NE+YK N+ Q+P+ +N +P DVNVTPDKR + +E ++ +
Sbjct: 291 EYPTFLKCCNEVYKTFNNVQFPVVFLNLELPPSLIDVNVTPDKRIILLHNEQVVIDVFKA 350
Query: 238 GLQEIYS 244
L + Y+
Sbjct: 351 NLTDYYN 357
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 49/71 (69%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I IN VHRI +GQVI DL++AVKELV+NS+DA A IEI K+YG + + DNG G
Sbjct: 4 INQINDADVHRITSGQVITDLTTAVKELVDNSIDANANQIEITFKDYGLDCIECSDNGDG 63
Query: 72 ISPNNFKVRAV 82
I P N++ A+
Sbjct: 64 IDPLNYEFLAL 74
>gi|115384270|ref|XP_001208682.1| hypothetical protein ATEG_01317 [Aspergillus terreus NIH2624]
gi|114196374|gb|EAU38074.1| hypothetical protein ATEG_01317 [Aspergillus terreus NIH2624]
Length = 1049
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 98/234 (41%), Positives = 139/234 (59%), Gaps = 25/234 (10%)
Query: 597 ALAAATTELERL---FRKEDFGRMKVIGQFNLGFI-------------IGKLDQDLFIVD 640
A + T ERL K+DF +M++IGQFNLGFI I +LFI+D
Sbjct: 772 ATGSQETAEERLSLTVSKDDFAQMRIIGQFNLGFILATRSSRDSSNSAISASKDELFIID 831
Query: 641 QHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHA 700
QHA+DEK+NFERL TV+ Q L++P +LDLT EE + + + KNGF +E D
Sbjct: 832 QHASDEKFNFERLQAETVVQNQRLVQPKRLDLTAVEEEIVIENQAALEKNGFIVEVDDSG 891
Query: 701 --LAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCP--SR 756
G R +L ++P SK++ FGV D+++LI L++ + + +D P S+
Sbjct: 892 DEPIGRRCKLVSLPLSKEVVFGVRDLEELIVLLSEMPATGTTGGA-----SDRYVPRPSK 946
Query: 757 VRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
VR M A RACRSSIMIG L +M++++ ++ ++ PWNCPHGRPTMRHL+ L
Sbjct: 947 VRKMFAMRACRSSIMIGKTLTTKQMERVVRNMGTIDKPWNCPHGRPTMRHLMSL 1000
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/236 (31%), Positives = 114/236 (48%), Gaps = 24/236 (10%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICK 143
L AYA ++ GVRF NT GK VV T+G+ + K+NI V+G L P+ +
Sbjct: 177 LLHAYACVSTGVRFSVKNTVGKTRNVVVFSTKGNPTTKENIANVYGAKTLLALIPLDLTL 236
Query: 144 S----------------DSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVN 187
+ +V G +S+P G GR DRQ FFVN RP LP+++K N
Sbjct: 237 EFEPSVAGRRASAGEALNQIRVRGHVSRPVFGEGRQTPDRQMFFVNSRPCGLPQIAKAFN 296
Query: 188 ELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNN 247
E+YK N Q P +F + T A DVNV+PDKR + D +++ +L+ L E++ +
Sbjct: 297 EVYKSFNVSQSPFVFADFHMDTNAYDVNVSPDKRTILLHDAGALIESLKTSLTEVFESAD 356
Query: 248 ASYSVNKVEQLIEPEKSGPSSGAESCMFLEQLSP-------DGNGCIEILNEQQIS 296
+ ++V +P S P+S + +P DG+G + + Q S
Sbjct: 357 QTVPQSQVSGAKQP-GSKPNSTLFQSFLASKHAPEETPADGDGSGVADEIGSSQAS 411
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 48/68 (70%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
TI+ I VH+I +GQVI DL S KELVENSLDAGATSIE+ K G + +V DNG
Sbjct: 3 TIKAIEARSVHQIQSGQVIVDLCSVAKELVENSLDAGATSIEVRFKNSGLDAIEVQDNGS 62
Query: 71 GISPNNFK 78
GIS +N++
Sbjct: 63 GISRDNYE 70
>gi|315050860|ref|XP_003174804.1| DNA mismatch repair protein pms1 [Arthroderma gypseum CBS 118893]
gi|311340119|gb|EFQ99321.1| DNA mismatch repair protein pms1 [Arthroderma gypseum CBS 118893]
Length = 1039
Score = 181 bits (459), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 103/252 (40%), Positives = 139/252 (55%), Gaps = 41/252 (16%)
Query: 600 AATTELERLFRKEDFGRMKVIGQFNLGFII------------------GKLDQDLFIVDQ 641
A T+L K+DF RM++IGQFNLGFI+ G +LFI+DQ
Sbjct: 749 APETKLSLAVSKKDFSRMRIIGQFNLGFILATRPGGSPDSTRSSARPAGNEQDELFIIDQ 808
Query: 642 HAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHA- 700
HA+DEKYNFERL T + Q L++P LDLT EE V ++ + KNGF +E D
Sbjct: 809 HASDEKYNFERLQAETTVQNQRLVKPKTLDLTSVEEEVIIDNLAALEKNGFIVEIDTSGD 868
Query: 701 -LAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD-------NQG--------------EC 738
G R +L ++P SK++ F D+++LI L++ N+G E
Sbjct: 869 EPIGRRCKLISLPLSKEVVFDTRDLEELIVLLSEAPQQSQNNRGKRSRNELDSDAEDVEP 928
Query: 739 SIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCP 798
S I+S PS+VR M A RACRSSIMIG L +M+ +++H+ ++ PWNCP
Sbjct: 929 SGIASSPFSDYLVPRPSKVRKMFAMRACRSSIMIGKNLTHRQMETVVKHMGTIDKPWNCP 988
Query: 799 HGRPTMRHLVDL 810
HGRPTMRHLV L
Sbjct: 989 HGRPTMRHLVSL 1000
Score = 119 bits (299), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 98/191 (51%), Gaps = 15/191 (7%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCL--- 136
+ + L AYA I+ GVRF N K VV T+ + + ++NI V+G L
Sbjct: 154 KVIALLHAYACISTGVRFNVKNQMPKGKSVVVFTTKSNPTTRENISNVYGAKTLLALMPL 213
Query: 137 ------EPVAICK------SDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSK 184
EP + K S+ V G +SKP G GR DRQ FFVN RP LP+++K
Sbjct: 214 DLNLEFEPSSAAKRFSSNVSNKLFVHGHISKPIFGEGRQTPDRQMFFVNSRPCGLPQIAK 273
Query: 185 LVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYS 244
NE+YK N Q P NF + T A DVNV+PDKR + D +++ +L+ L E++
Sbjct: 274 AFNEVYKSFNLSQSPFIFANFEMDTSAYDVNVSPDKRTILLHDAGALIESLKASLTELFE 333
Query: 245 PNNASYSVNKV 255
+ + V+++
Sbjct: 334 NQDQTVPVSQL 344
Score = 43.1 bits (100), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 19/72 (26%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
TI+PI VH+I +GQVI DL + K G + +V DNG
Sbjct: 3 TIKPIEARSVHQIQSGQVIVDLY-------------------VRFKNNGLDLIEVQDNGH 43
Query: 71 GISPNNFKVRAV 82
GISPNN++ A+
Sbjct: 44 GISPNNYESLAL 55
>gi|349580855|dbj|GAA26014.1| K7_Pms1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 877
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 92/204 (45%), Positives = 131/204 (64%), Gaps = 14/204 (6%)
Query: 611 KEDFGRMKVIGQFNLGFII--GKLDQ--DLFIVDQHAADEKYNFERLSQSTVLNQQPLLR 666
K DF +M+V+GQFNLGFII K+D DLFIVDQHA+DEKYNFE L TV Q L+
Sbjct: 672 KNDFKKMEVVGQFNLGFIIVTRKVDNKYDLFIVDQHASDEKYNFETLQAVTVFKSQKLII 731
Query: 667 PLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKD 726
P ++L+ +E+V ++ + KNGF L+ D G R RL ++P SK+ F + D +
Sbjct: 732 PQPVELSVIDELVVLDNLPVFEKNGFKLKIDEEEEFGSRVRLLSLPTSKQTLFDLGDFNE 791
Query: 727 LISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILE 786
LI + ++ G D++ S++R+M A RACRSS+MIG L + M +++
Sbjct: 792 LIHLIKEDGGL----------RRDNIRCSKIRSMFAMRACRSSLMIGKPLNKKTMTRVVH 841
Query: 787 HLADLNSPWNCPHGRPTMRHLVDL 810
+L++L+ PWNCPHGRPTMRHL++L
Sbjct: 842 NLSELDKPWNCPHGRPTMRHLMEL 865
Score = 105 bits (263), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 96/188 (51%), Gaps = 22/188 (11%)
Query: 79 VRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP 138
+ + + Q YA+I ++F N T K K+++L T +SS++ NI +VFG LE
Sbjct: 170 TKCLTVIQGYAIINAAIKFSVWNITPKGKKNLILSTMRNSSMRKNISSVFGAGGMRGLEE 229
Query: 139 VAIC-------------KSDS---------CKVEGFLSKPGQGSGRNLGDRQYFFVNDRP 176
V + +D +V+G++S+ G GRN DRQ+ +VN RP
Sbjct: 230 VDLVLDLNPFKNRMLGKYTDDPDFLDLDYKIRVKGYISQNSFGCGRNSKDRQFIYVNKRP 289
Query: 177 VDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALR 236
V+ + K NE+YK N+ Q+P +N +P DVNVTPDKR + +E +++ +
Sbjct: 290 VEYSTLLKCCNEVYKTFNNVQFPAVFLNLELPMSLIDVNVTPDKRVILLHNERAVIDIFK 349
Query: 237 EGLQEIYS 244
L + Y+
Sbjct: 350 TTLSDYYN 357
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 51/71 (71%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I IN VHRI +GQVI DL++AVKELV+NS+DA A+ IEI K+YG E + DNG G
Sbjct: 4 IHQINDIDVHRITSGQVITDLTTAVKELVDNSIDANASQIEIIFKDYGLESIECSDNGDG 63
Query: 72 ISPNNFKVRAV 82
I P+N++ A+
Sbjct: 64 IDPSNYEFLAL 74
>gi|320592269|gb|EFX04708.1| DNA mismatch repair protein [Grosmannia clavigera kw1407]
Length = 917
Score = 181 bits (458), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 101/237 (42%), Positives = 140/237 (59%), Gaps = 23/237 (9%)
Query: 600 AATTELERLFRKEDFGRMKVIGQFNLGFIIG--------------KLDQD-LFIVDQHAA 644
AA +L K DFG+M+V+GQFNLGFI+ +LD D LFI+DQHA+
Sbjct: 649 AAEEKLALTIAKSDFGQMRVVGQFNLGFILAVRRGGREEEEGRSRRLDDDELFIIDQHAS 708
Query: 645 DEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHAL--A 702
DEKYNFERL +T L Q L++P +L LT EE V ++ NGF ++
Sbjct: 709 DEKYNFERLRATTTLQSQRLVQPKRLSLTAVEEEVVFESRAVLAANGFVVDVVVDGSEPV 768
Query: 703 GLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVC------PSR 756
G R RL +P S++ TF + D+++LI+ LA++ G + +D + S+ P++
Sbjct: 769 GARCRLLTLPLSRETTFDLGDLEELIALLAEHPGAAYADNLDCLDLSLSLSSTPIPRPAK 828
Query: 757 VRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTI 813
VR MLA RACRSSIM+G AL +M +L H+ ++ PWNCPHGRPTMRHL L +
Sbjct: 829 VRRMLAMRACRSSIMVGRALSHRQMAAVLAHMGHMDKPWNCPHGRPTMRHLGSLGRV 885
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 92/189 (48%), Gaps = 25/189 (13%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCL--- 136
+ V L YA I GV+F + K + V+ T+G+++ +DN+I +FG L
Sbjct: 163 KVVSLLNQYACIQTGVKFTVSQQPSKGKRVVLFSTKGNATTRDNLINIFGAKTMTSLIQL 222
Query: 137 -----------------EPVAICKS-----DSCKVEGFLSKPGQGSGRNLGDRQYFFVND 174
PVA +VEG++S+P G GR DRQ FFVN
Sbjct: 223 GLTMELELTRDARAKWTSPVADGGGGGGSIQEIRVEGYVSRPAHGQGRQTPDRQMFFVNG 282
Query: 175 RPVDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHA 234
RP LP+ ++L E+Y+ N+ Q P + + T DVNV+PDK+ + D+ +L
Sbjct: 283 RPCKLPQFAQLFGEVYRTYNTSQAPFIFADIQLDTHLYDVNVSPDKQTILLHDQGKMLDN 342
Query: 235 LREGLQEIY 243
LRE L E++
Sbjct: 343 LRESLIELF 351
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 40/56 (71%)
Query: 23 ICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFK 78
I +GQVI +L S KELVENS+DAGATSIE+ K G + +V DNG GIS N++
Sbjct: 5 IQSGQVIVNLCSVAKELVENSIDAGATSIEVRFKNQGLDSVEVQDNGYGISTQNYE 60
>gi|324503073|gb|ADY41341.1| Mismatch repair endonuclease PMS2 [Ascaris suum]
Length = 900
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 95/218 (43%), Positives = 126/218 (57%), Gaps = 14/218 (6%)
Query: 600 AATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVL 659
AA +L RKEDF M V+GQFN GFII +L DLFIVDQHA+DEKYNFERL + +
Sbjct: 679 AAEDDLGANVRKEDFAVMDVVGQFNKGFIITRLRGDLFIVDQHASDEKYNFERLQKEARI 738
Query: 660 NQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITF 719
Q L+ P L + EE +++I +NGF D + + R L +VP
Sbjct: 739 QSQLLINPRPLKIGAMEEAALRDNIEIFNQNGFEFRFDDNGESEGRALLTSVPVLNSCQL 798
Query: 720 GVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRN 779
G D+ +++S LAD G + Y+ P+++R + ASRACR S+MIG AL
Sbjct: 799 GTSDIDEMLSVLADFPG-----TMYR--------PTKLRKLFASRACRKSVMIGMALSTP 845
Query: 780 EMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKNI 817
+M+KI+ HL L+ PWNCPHGRPT R L L R N+
Sbjct: 846 QMEKIVRHLGALHHPWNCPHGRPTFRRLCSLAA-RPNV 882
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 83/182 (45%), Gaps = 20/182 (10%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGM------------- 130
+ AL VRF ++ ++ GS+S+K+ ++++FG
Sbjct: 180 VVHTLALSRTDVRFCVSSILDGRQHQILSTPGGSASIKEVLVSLFGARSDKNAVLDIVQR 239
Query: 131 -------NIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVS 183
+IY + K+ G++S G GR+ DRQ+ + N RPV PK+
Sbjct: 240 APDNEVCSIYGVSAENSASTFAEIKLSGYVSSCVHGHGRSTADRQFIYFNKRPVQYPKLC 299
Query: 184 KLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIY 243
++ NE+Y+ N QY + ++ VP + DVNV PDKR VF+ E + +R L +
Sbjct: 300 RIANEVYQQYNQGQYCMLVLLVDVPPESIDVNVAPDKRSVFYEKERELFAVVRASLLATF 359
Query: 244 SP 245
P
Sbjct: 360 EP 361
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 54/78 (69%), Gaps = 4/78 (5%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I PI V RIC GQV+ L A KE+++N+LDAGAT+IE+ L+ +G E +V+DNGCG
Sbjct: 8 IAPIPADVCRRICTGQVVTTLGDACKEVIDNALDAGATTIEVRLRSFGSESMEVIDNGCG 67
Query: 72 ISPNNFKVRAVFLCQAYA 89
I ++F+ LC+A+A
Sbjct: 68 IHSSDFEA----LCKAHA 81
>gi|19880883|gb|AAM00533.1|AF458971_6 PMS1 [Saccharomyces cerevisiae]
Length = 908
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 92/204 (45%), Positives = 131/204 (64%), Gaps = 14/204 (6%)
Query: 611 KEDFGRMKVIGQFNLGFII--GKLDQ--DLFIVDQHAADEKYNFERLSQSTVLNQQPLLR 666
K DF +M+V+GQFNLGFII K+D DLFIVDQHA+DEKYNFE L TV Q L+
Sbjct: 703 KNDFKKMEVVGQFNLGFIIVTRKVDNKYDLFIVDQHASDEKYNFETLQAVTVFKSQKLII 762
Query: 667 PLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKD 726
P ++L+ +E+V ++ + KNGF L+ D G R RL ++P SK+ F + D +
Sbjct: 763 PQPVELSVIDELVVLDNLPVFEKNGFKLKIDEEEEFGSRVRLLSLPTSKQTLFDLGDFNE 822
Query: 727 LISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILE 786
LI + ++ G D++ S++R+M A RAC+SSIMIG L + M +++
Sbjct: 823 LIHLIKEDGGL----------RRDNIRCSKIRSMFAMRACKSSIMIGKPLNKKTMTRVVH 872
Query: 787 HLADLNSPWNCPHGRPTMRHLVDL 810
+L++L+ PWNCPHGRPTMRHL++L
Sbjct: 873 NLSELDKPWNCPHGRPTMRHLMEL 896
Score = 105 bits (263), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 96/187 (51%), Gaps = 22/187 (11%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
+ + + Q YA+I ++F N T K K+++L T +SS++ NI +VFG LE V
Sbjct: 202 KCLTVIQGYAIINAAIKFSVWNITPKGKKNLILSTMRNSSMRKNISSVFGAGGMRGLEEV 261
Query: 140 AIC-------------KSDS---------CKVEGFLSKPGQGSGRNLGDRQYFFVNDRPV 177
+ +D +V+G++S+ G GRN DRQ+ +VN RPV
Sbjct: 262 DLVLDLNPFKNRMLGKYTDDPDFLDLDYKIRVKGYISQNSFGCGRNSKDRQFIYVNKRPV 321
Query: 178 DLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALRE 237
+ + K NE+YK N+ Q+P +N +P DVNVTPDKR + +E +++ +
Sbjct: 322 EYSTLLKCCNEVYKTFNNVQFPAVFLNLELPMSLIDVNVTPDKRVILLHNERAVIDIFKT 381
Query: 238 GLQEIYS 244
L + Y+
Sbjct: 382 TLSDYYN 388
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 50/71 (70%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I IN VHRI +GQVI DL++AVKELV+NS+DA A IEI K+YG E + DNG G
Sbjct: 35 IHQINDIDVHRITSGQVITDLTTAVKELVDNSIDANANQIEIIFKDYGLESIECSDNGDG 94
Query: 72 ISPNNFKVRAV 82
I P+N++ A+
Sbjct: 95 IDPSNYEFLAL 105
>gi|19880897|gb|AAM00545.1|AF458973_6 PMS1 [Saccharomyces cerevisiae]
Length = 908
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 92/204 (45%), Positives = 131/204 (64%), Gaps = 14/204 (6%)
Query: 611 KEDFGRMKVIGQFNLGFII--GKLDQ--DLFIVDQHAADEKYNFERLSQSTVLNQQPLLR 666
K DF +M+V+GQFNLGFII K+D DLFIVDQHA+DEKYNFE L TV Q L+
Sbjct: 703 KNDFKKMEVVGQFNLGFIIVTRKVDNKYDLFIVDQHASDEKYNFETLQAVTVFKSQKLII 762
Query: 667 PLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKD 726
P ++L+ +E+V ++ + KNGF L+ D G R +L ++P SK+ F + D +
Sbjct: 763 PQPVELSVIDELVVLDNLPVFEKNGFKLKIDEEEEFGSRVKLLSLPTSKQTLFDLGDFNE 822
Query: 727 LISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILE 786
LI + ++ G D++ S++R+M A RACRSSIMIG L + M +++
Sbjct: 823 LIHLIKEDGGL----------RRDNIRCSKIRSMFAMRACRSSIMIGKPLNKKTMTRVVH 872
Query: 787 HLADLNSPWNCPHGRPTMRHLVDL 810
+L++L+ PWNCPHGRPTMRHL++L
Sbjct: 873 NLSELDKPWNCPHGRPTMRHLMEL 896
Score = 105 bits (263), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 94/183 (51%), Gaps = 22/183 (12%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAIC- 142
+ Q YA+I ++F N T K K+++L T +SS++ NI +VFG LE V +
Sbjct: 206 VIQGYAIINAAIKFSVWNITPKGKKNLILSTMRNSSMRKNISSVFGAGGMRGLEEVDLVL 265
Query: 143 ------------KSDS---------CKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPK 181
+D +V+G++S+ G GRN DRQ+ +VN RPV+
Sbjct: 266 DLNPFKNRMLGKYTDDPDFLDLDYKIRVKGYISQNSFGCGRNSKDRQFIYVNKRPVEYST 325
Query: 182 VSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQE 241
+ K NE+YK N+ Q+P +N +P DVNVTPDKR + +E +++ + L +
Sbjct: 326 LLKCCNEVYKTFNNVQFPAVFLNLELPMSLIDVNVTPDKRVILLHNERAVIDIFKTTLSD 385
Query: 242 IYS 244
Y+
Sbjct: 386 YYN 388
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 50/71 (70%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I IN VHRI +GQVI DL++AVKELV+NS+DA A IEI K+YG E + DNG G
Sbjct: 35 IHQINDIDVHRITSGQVITDLTTAVKELVDNSIDANANQIEIIFKDYGLESIECSDNGDG 94
Query: 72 ISPNNFKVRAV 82
I P+N++ A+
Sbjct: 95 IDPSNYEFLAL 105
>gi|256270259|gb|EEU05477.1| Pms1p [Saccharomyces cerevisiae JAY291]
Length = 877
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 92/204 (45%), Positives = 131/204 (64%), Gaps = 14/204 (6%)
Query: 611 KEDFGRMKVIGQFNLGFII--GKLDQ--DLFIVDQHAADEKYNFERLSQSTVLNQQPLLR 666
K DF +M+V+GQFNLGFII K+D DLFIVDQHA+DEKYNFE L TV Q L+
Sbjct: 672 KNDFKKMEVVGQFNLGFIIVTRKVDNKYDLFIVDQHASDEKYNFETLQAVTVFKSQKLII 731
Query: 667 PLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKD 726
P ++L+ +E+V ++ + KNGF L+ D G R +L ++P SK+ F + D +
Sbjct: 732 PQPVELSVIDELVVLDNLPVFEKNGFKLKIDEEEEFGSRVKLLSLPTSKQTLFDLGDFNE 791
Query: 727 LISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILE 786
LI + ++ G D++ S++R+M A RACRSSIMIG L + M +++
Sbjct: 792 LIHLIKEDGGL----------RRDNIRCSKIRSMFAMRACRSSIMIGKPLNKETMTRVVH 841
Query: 787 HLADLNSPWNCPHGRPTMRHLVDL 810
+L++L+ PWNCPHGRPTMRHL++L
Sbjct: 842 NLSELDKPWNCPHGRPTMRHLMEL 865
Score = 105 bits (263), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 96/188 (51%), Gaps = 22/188 (11%)
Query: 79 VRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP 138
+ + + Q YA+I ++F N T K K+++L T +SS++ NI +VFG LE
Sbjct: 170 TKCLTVIQGYAIINAAIKFSVWNITPKGKKNLILSTMRNSSMRKNISSVFGAGGMRGLEE 229
Query: 139 VAIC-------------KSDS---------CKVEGFLSKPGQGSGRNLGDRQYFFVNDRP 176
V + +D +V+G++S+ G GRN DRQ+ +VN RP
Sbjct: 230 VDLVLDLNPFKNRMLGKYTDDPDFLDLDYKIRVKGYISQNSFGCGRNSKDRQFIYVNKRP 289
Query: 177 VDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALR 236
V+ + K NE+YK N+ Q+P +N +P DVNVTPDKR + +E +++ +
Sbjct: 290 VEYSTLLKCCNEVYKTFNNVQFPAVFLNLELPMSLIDVNVTPDKRVILLHNERAVIDIFK 349
Query: 237 EGLQEIYS 244
L + Y+
Sbjct: 350 TTLSDYYN 357
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 50/71 (70%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I IN VHRI +GQVI DL++AVKELV+NS+DA A IEI K+YG E + DNG G
Sbjct: 4 IHQINDIDVHRITSGQVITDLTTAVKELVDNSIDANANQIEIIFKDYGLESIECSDNGDG 63
Query: 72 ISPNNFKVRAV 82
I P+N++ A+
Sbjct: 64 IDPSNYEFLAL 74
>gi|19880869|gb|AAM00521.1|AF458969_6 PMS1 [Saccharomyces cerevisiae]
gi|19880925|gb|AAM00569.1|AF458977_6 PMS1 [Saccharomyces cerevisiae]
gi|791102|emb|CAA60176.1| DNA mismatch repair protein [Saccharomyces cerevisiae]
gi|1301977|emb|CAA95957.1| PMS1 [Saccharomyces cerevisiae]
gi|2253174|emb|CAA95956.1| PMS1 [Saccharomyces cerevisiae]
Length = 904
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 92/204 (45%), Positives = 131/204 (64%), Gaps = 14/204 (6%)
Query: 611 KEDFGRMKVIGQFNLGFII--GKLDQ--DLFIVDQHAADEKYNFERLSQSTVLNQQPLLR 666
K DF +M+V+GQFNLGFII K+D DLFIVDQHA+DEKYNFE L TV Q L+
Sbjct: 699 KNDFKKMEVVGQFNLGFIIVTRKVDNKYDLFIVDQHASDEKYNFETLQAVTVFKSQKLII 758
Query: 667 PLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKD 726
P ++L+ +E+V ++ + KNGF L+ D G R +L ++P SK+ F + D +
Sbjct: 759 PQPVELSVIDELVVLDNLPVFEKNGFKLKIDEEEEFGSRVKLLSLPTSKQTLFDLGDFNE 818
Query: 727 LISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILE 786
LI + ++ G D++ S++R+M A RACRSSIMIG L + M +++
Sbjct: 819 LIHLIKEDGGL----------RRDNIRCSKIRSMFAMRACRSSIMIGKPLNKKTMTRVVH 868
Query: 787 HLADLNSPWNCPHGRPTMRHLVDL 810
+L++L+ PWNCPHGRPTMRHL++L
Sbjct: 869 NLSELDKPWNCPHGRPTMRHLMEL 892
Score = 105 bits (263), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 94/183 (51%), Gaps = 22/183 (12%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAIC- 142
+ Q YA+I ++F N T K K+++L T +SS++ NI +VFG LE V +
Sbjct: 206 VIQGYAIINAAIKFSVWNITPKGKKNLILSTMRNSSMRKNISSVFGAGGMRGLEEVDLVL 265
Query: 143 ------------KSDS---------CKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPK 181
+D +V+G++S+ G GRN DRQ+ +VN RPV+
Sbjct: 266 DLNPFKNRMLGKYTDDPDFLDLDYKIRVKGYISQNSFGCGRNSKDRQFIYVNKRPVEYST 325
Query: 182 VSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQE 241
+ K NE+YK N+ Q+P +N +P DVNVTPDKR + +E +++ + L +
Sbjct: 326 LLKCCNEVYKTFNNVQFPAVFLNLELPMSLIDVNVTPDKRVILLHNERAVIDIFKTTLSD 385
Query: 242 IYS 244
Y+
Sbjct: 386 YYN 388
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 50/71 (70%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I IN VHRI +GQVI DL++AVKELV+NS+DA A IEI K+YG E + DNG G
Sbjct: 35 IHQINDIDVHRITSGQVITDLTTAVKELVDNSIDANANQIEIIFKDYGLESIECSDNGDG 94
Query: 72 ISPNNFKVRAV 82
I P+N++ A+
Sbjct: 95 IDPSNYEFLAL 105
>gi|403160359|ref|XP_003890601.1| hypothetical protein, variant [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375169524|gb|EHS63906.1| hypothetical protein, variant [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1018
Score = 180 bits (457), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 95/214 (44%), Positives = 131/214 (61%), Gaps = 18/214 (8%)
Query: 601 ATTELERLFRKEDFGRMKVIGQFNLGFII-GKLDQ-----DLFIVDQHAADEKYNFERLS 654
A T L R +K DF M++IGQFNLGFII ++D+ DLFIVDQHA+DEK+NFE+L
Sbjct: 792 AETTLSRNVQKADFEHMEIIGQFNLGFIIVRRIDEKHSTDDLFIVDQHASDEKFNFEKLQ 851
Query: 655 QSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFS 714
+ T L Q LL P LDLT EE+ ++DI+ NGFS++ D A G R +L A P S
Sbjct: 852 RETKLTGQRLLIPKMLDLTAAEEITVMDNLDILELNGFSVQVDESAKVGERVKLLAQPVS 911
Query: 715 KKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGD 774
++ V D+ +L+ + + +G ++ PS+ R M+ASRACR S MIGD
Sbjct: 912 GNTSWDVSDLGELLHLITE-RGSNEVVR-----------PSKTRRMMASRACRMSTMIGD 959
Query: 775 ALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLV 808
+L +M +I+ + ++ PW CPHGRPTMR L
Sbjct: 960 SLTVKQMARIVSQMGTMDQPWACPHGRPTMRWLA 993
Score = 121 bits (304), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 104/200 (52%), Gaps = 23/200 (11%)
Query: 79 VRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVF---GMNIYNC 135
A QAY LI+ + +N K +K+ +T+ +S +K N +F N+
Sbjct: 184 AHAQTWLQAYGLISTNLSLNVSNHPAKGIKTFQFQTKCNSQIKQNFSNIFTPKACNMMVD 243
Query: 136 LE-----------------PVAICKSD---SCKVEGFLSKPGQGSGRNLGDRQYFFVNDR 175
LE P+ D + V+G +S+P G GRN DRQ++++N R
Sbjct: 244 LELRFKVKPDRTVLRALGLPIDSTSEDLGTTVLVKGLMSRPAHGQGRNSPDRQFYYINGR 303
Query: 176 PVDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHAL 235
P K+SK VNE+YK N+ QYP+ + NFI+P+ + D+N+ P+KR +F E +++ AL
Sbjct: 304 PFTPSKISKCVNEVYKQFNTNQYPVLLANFILPSDSYDLNIDPNKRSIFLHSEGNLIEAL 363
Query: 236 REGLQEIYSPNNASYSVNKV 255
RE L P +++S +++
Sbjct: 364 REALDSFCQPYRSTFSASQL 383
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/62 (59%), Positives = 45/62 (72%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
TIR I+ V +I + QV+ DL +AVKELVENSLDAGAT I++ K YG E F+V DNG
Sbjct: 15 TIRAIDSHSVQKITSSQVVVDLQTAVKELVENSLDAGATIIDVKFKNYGLESFEVSDNGT 74
Query: 71 GI 72
GI
Sbjct: 75 GI 76
>gi|19880904|gb|AAM00551.1|AF458974_6 PMS1 [Saccharomyces cerevisiae]
Length = 908
Score = 180 bits (457), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 92/204 (45%), Positives = 131/204 (64%), Gaps = 14/204 (6%)
Query: 611 KEDFGRMKVIGQFNLGFII--GKLDQ--DLFIVDQHAADEKYNFERLSQSTVLNQQPLLR 666
K DF +M+V+GQFNLGFII K+D DLFIVDQHA+DEKYNFE L TV Q L+
Sbjct: 703 KNDFKKMEVVGQFNLGFIIVTRKVDNKYDLFIVDQHASDEKYNFETLQAVTVFKSQKLII 762
Query: 667 PLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKD 726
P ++L+ +E+V ++ + KNGF L+ D G R +L ++P SK+ F + D +
Sbjct: 763 PQPVELSVIDELVVLDNLPVFEKNGFKLKIDEEEEFGSRVKLLSLPTSKQTLFDLGDFNE 822
Query: 727 LISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILE 786
LI + ++ G D++ S++R+M A RACRSSIMIG L + M +++
Sbjct: 823 LIHLIKEDGGL----------RRDNIRCSKIRSMFAMRACRSSIMIGKPLNKKTMTRVVH 872
Query: 787 HLADLNSPWNCPHGRPTMRHLVDL 810
+L++L+ PWNCPHGRPTMRHL++L
Sbjct: 873 NLSELDKPWNCPHGRPTMRHLMEL 896
Score = 105 bits (263), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 96/188 (51%), Gaps = 22/188 (11%)
Query: 79 VRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP 138
+ + + Q YA+I ++F N T K K+++L T +SS++ NI +VFG LE
Sbjct: 201 TKCLTVIQGYAIINAAIKFSVWNITPKGKKNLILSTMRNSSMRKNISSVFGAGGMRGLEE 260
Query: 139 VAIC-------------KSDS---------CKVEGFLSKPGQGSGRNLGDRQYFFVNDRP 176
V + +D +V+G++S+ G GRN DRQ+ +VN RP
Sbjct: 261 VDLVLDLNPFKNRMLGKYTDDPDFLDLDYKIRVKGYISQNSFGCGRNSKDRQFIYVNKRP 320
Query: 177 VDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALR 236
V+ + K NE+YK N+ Q+P +N +P DVNVTPDKR + +E +++ +
Sbjct: 321 VEYSTLLKCCNEVYKTFNNVQFPAVFLNLELPMSLIDVNVTPDKRVILLHNERAVIDIFK 380
Query: 237 EGLQEIYS 244
L + Y+
Sbjct: 381 TTLSDYYN 388
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 51/71 (71%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I IN VHRI +GQVI DL++AVKELV+NS+DA A+ IEI K+YG E + DNG G
Sbjct: 35 IHQINDIDVHRITSGQVITDLTTAVKELVDNSIDANASQIEIIFKDYGLESIECSDNGDG 94
Query: 72 ISPNNFKVRAV 82
I P+N++ A+
Sbjct: 95 IDPSNYEFLAL 105
>gi|323346896|gb|EGA81175.1| Pms1p [Saccharomyces cerevisiae Lalvin QA23]
gi|365763326|gb|EHN04855.1| Pms1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 873
Score = 180 bits (457), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 92/204 (45%), Positives = 131/204 (64%), Gaps = 14/204 (6%)
Query: 611 KEDFGRMKVIGQFNLGFII--GKLDQ--DLFIVDQHAADEKYNFERLSQSTVLNQQPLLR 666
K DF +M+V+GQFNLGFII K+D DLFIVDQHA+DEKYNFE L TV Q L+
Sbjct: 668 KNDFKKMEVVGQFNLGFIIVTRKVDNKYDLFIVDQHASDEKYNFETLQAVTVFKSQKLII 727
Query: 667 PLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKD 726
P ++L+ +E+V ++ + KNGF L+ D G R +L ++P SK+ F + D +
Sbjct: 728 PQPVELSVIDELVVLDNLPVFEKNGFKLKIDEEEEFGSRVKLLSLPTSKQTLFDLGDFNE 787
Query: 727 LISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILE 786
LI + ++ G D++ S++R+M A RACRSSIMIG L + M +++
Sbjct: 788 LIHLIKEDGGL----------RRDNIRCSKIRSMFAMRACRSSIMIGKPLNKKTMTRVVH 837
Query: 787 HLADLNSPWNCPHGRPTMRHLVDL 810
+L++L+ PWNCPHGRPTMRHL++L
Sbjct: 838 NLSELDKPWNCPHGRPTMRHLMEL 861
Score = 105 bits (263), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 94/183 (51%), Gaps = 22/183 (12%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAIC- 142
+ Q YA+I ++F N T K K+++L T +SS++ NI +VFG LE V +
Sbjct: 175 VIQGYAIINAAIKFSVWNITPKGKKNLILSTMRNSSMRKNISSVFGAGGMRGLEEVDLVL 234
Query: 143 ------------KSDS---------CKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPK 181
+D +V+G++S+ G GRN DRQ+ +VN RPV+
Sbjct: 235 DLNPFKNRMLGKYTDDPDFLDLDYKIRVKGYISQNSFGCGRNSKDRQFIYVNKRPVEYST 294
Query: 182 VSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQE 241
+ K NE+YK N+ Q+P +N +P DVNVTPDKR + +E +++ + L +
Sbjct: 295 LLKCCNEVYKTFNNVQFPAVFLNLELPMSLIDVNVTPDKRVILLHNERAVIDIFKTTLSD 354
Query: 242 IYS 244
Y+
Sbjct: 355 YYN 357
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 50/71 (70%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I IN VHRI +GQVI DL++AVKELV+NS+DA A IEI K+YG E + DNG G
Sbjct: 4 IHQINDIDVHRITSGQVITDLTTAVKELVDNSIDANANQIEIIFKDYGLESIECSDNGDG 63
Query: 72 ISPNNFKVRAV 82
I P+N++ A+
Sbjct: 64 IDPSNYEFLAL 74
>gi|396487991|ref|XP_003842770.1| similar to DNA mismatch repair protein pms1 [Leptosphaeria maculans
JN3]
gi|312219347|emb|CBX99291.1| similar to DNA mismatch repair protein pms1 [Leptosphaeria maculans
JN3]
Length = 1099
Score = 180 bits (457), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 96/217 (44%), Positives = 130/217 (59%), Gaps = 22/217 (10%)
Query: 611 KEDFGRMKVIGQFNLGFIIG-------KLDQDLFIVDQHAADEKYNFERLSQSTVLNQQP 663
K DF M++IGQFNLGFII DLFI+DQHA+DEKYNFERLS +T L Q
Sbjct: 854 KSDFSEMRIIGQFNLGFIIAVRPPTTTSPTSDLFIIDQHASDEKYNFERLSATTTLVSQR 913
Query: 664 LLRPLKLDLTPEEEVVASMHMDIIRKNGFSLE----------EDPHALAGLRFRLKAVPF 713
L+ P L+LT EE + + + NGF +E + AG R +L A+P
Sbjct: 914 LVHPHPLELTAVEEEIILANQHALTANGFVVEMNTNPNNANDNNSQDEAGHRAKLTALPM 973
Query: 714 SKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIG 773
SK++TF D+++L++ + DN S +S + PS+VR +LASRACRSS+MIG
Sbjct: 974 SKEVTFSPTDLEELLALILDNPPSSSTSTSPHIPR-----PSKVRKLLASRACRSSVMIG 1028
Query: 774 DALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
L M++I+ H+ ++ PW+CPHGRPTMRHL L
Sbjct: 1029 KTLQPPRMREIVRHMGSMDKPWSCPHGRPTMRHLFGL 1065
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 93/190 (48%), Gaps = 24/190 (12%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAIC- 142
L AYA I+ G++F +N K K++ T + S K+NI V+G L P+ +
Sbjct: 177 LLNAYACISVGIKFSVSNMMPKGKKTIAFSTNANPSTKENISNVYGAKTIAALIPLNLSF 236
Query: 143 -----------------------KSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDL 179
S + ++EG +S+P G GR DRQ FFVN RP +L
Sbjct: 237 ELDPSAQPGATQSAKNWSTQEDPGSSTVRIEGHVSRPVVGEGRQTPDRQMFFVNSRPCNL 296
Query: 180 PKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGL 239
P+V+K NE+YK N Q P + + T A DVNV+PDKR + ++ +L L+ L
Sbjct: 297 PQVAKAFNEVYKSFNITQSPFVFADIRLDTNAYDVNVSPDKRTIMLHNQTMLLENLKNAL 356
Query: 240 QEIYSPNNAS 249
E++ N S
Sbjct: 357 LELFEGQNQS 366
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 50/72 (69%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
TI+ I VH+I +GQVI DL S KELVENS+DAGAT+IE+ K G + +V DNG
Sbjct: 3 TIKAIEGRSVHQIQSGQVIVDLQSVCKELVENSIDAGATAIEVRFKNNGLDSIEVQDNGA 62
Query: 71 GISPNNFKVRAV 82
GI+P +++ A+
Sbjct: 63 GIAPADYETIAL 74
>gi|344302629|gb|EGW32903.1| hypothetical protein SPAPADRAFT_150269 [Spathaspora passalidarum
NRRL Y-27907]
Length = 836
Score = 180 bits (457), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 89/214 (41%), Positives = 136/214 (63%), Gaps = 15/214 (7%)
Query: 606 ERLF--RKEDFGRMKVIGQFNLGFI-IGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQ 662
E+LF +K DF M +IGQFNLGFI + D ++FI+DQHA+DEKYNFE+L + + Q
Sbjct: 629 EKLFHIKKSDFSEMSLIGQFNLGFILVNHQDSNIFIIDQHASDEKYNFEKLVREFQIKTQ 688
Query: 663 PLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVE 722
PL+ P +L+L +E++ H I NGF L+ + +L G R + ++P K F ++
Sbjct: 689 PLIVPQQLELNIVDEMLIIEHESIFINNGFRLKINHDSLPGTRISMLSLPTYKGTIFSLD 748
Query: 723 DVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQ 782
D +LI+ + + G ++ C S++R +LA +ACR+SIMIG +L +M
Sbjct: 749 DFYELINLINEQPGNTAV-----------KC-SKIRKLLAMKACRTSIMIGSSLTSKKMT 796
Query: 783 KILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKN 816
+I+E+L+ L+ PWNCPHGRPTMRHL++L+ + N
Sbjct: 797 EIVENLSTLDKPWNCPHGRPTMRHLIELSEWQNN 830
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 115/221 (52%), Gaps = 17/221 (7%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGS--SSLKDNIITVFGMNIYNCLE 137
+A+ Y LI G++F + K ++L ++G +++ DN+I++FG N L
Sbjct: 177 KAINFLINYLLIYTGIKFSVYHINNSK-KQLILSSRGGEKTTIIDNLISMFGNNNNKNLL 235
Query: 138 PVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQ 197
+ + ++ K+ G +S G GR+ DRQ+ ++N RP+ + +SKL+NE+YK N+ Q
Sbjct: 236 EINLPINEYLKLSGHISSYSFGLGRSTQDRQFLYINRRPIIMKNLSKLINEVYKSFNNVQ 295
Query: 198 YPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASYSVNKVEQ 257
YPI ++N + + D+N+TPDK + E IL +RE L E Y N ++
Sbjct: 296 YPIFVINLEIQSDKFDINLTPDKSMILLHKESEILQLIREKLIEFY---------NTQDK 346
Query: 258 LIEPEKSGPSSGAESCMFL----EQLSPDGNGCIEILNEQQ 294
+I P +S S E F EQ SPD I +N +Q
Sbjct: 347 VIIP-RSNNDSFIEQSTFEVNTDEQKSPDEFTLINKVNTKQ 386
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 41/67 (61%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
+IR + + +I + QVI DL S +KELVENS+DA ++ IEI YG + + DNG
Sbjct: 2 SIRSLPSNDILKITSSQVIIDLKSIIKELVENSIDAKSSKIEITFVNYGIDSISIQDNGV 61
Query: 71 GISPNNF 77
GI +F
Sbjct: 62 GIQQQDF 68
>gi|403160361|ref|XP_003320881.2| hypothetical protein PGTG_02903 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375169525|gb|EFP76462.2| hypothetical protein PGTG_02903 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1098
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 95/214 (44%), Positives = 131/214 (61%), Gaps = 18/214 (8%)
Query: 601 ATTELERLFRKEDFGRMKVIGQFNLGFII-GKLDQ-----DLFIVDQHAADEKYNFERLS 654
A T L R +K DF M++IGQFNLGFII ++D+ DLFIVDQHA+DEK+NFE+L
Sbjct: 872 AETTLSRNVQKADFEHMEIIGQFNLGFIIVRRIDEKHSTDDLFIVDQHASDEKFNFEKLQ 931
Query: 655 QSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFS 714
+ T L Q LL P LDLT EE+ ++DI+ NGFS++ D A G R +L A P S
Sbjct: 932 RETKLTGQRLLIPKMLDLTAAEEITVMDNLDILELNGFSVQVDESAKVGERVKLLAQPVS 991
Query: 715 KKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGD 774
++ V D+ +L+ + + +G ++ PS+ R M+ASRACR S MIGD
Sbjct: 992 GNTSWDVSDLGELLHLITE-RGSNEVVR-----------PSKTRRMMASRACRMSTMIGD 1039
Query: 775 ALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLV 808
+L +M +I+ + ++ PW CPHGRPTMR L
Sbjct: 1040 SLTVKQMARIVSQMGTMDQPWACPHGRPTMRWLA 1073
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 105/203 (51%), Gaps = 23/203 (11%)
Query: 79 VRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVF---GMNIYNC 135
A QAY LI+ + +N K +K+ +T+ +S +K N +F N+
Sbjct: 264 AHAQTWLQAYGLISTNLSLNVSNHPAKGIKTFQFQTKCNSQIKQNFSNIFTPKACNMMVD 323
Query: 136 LE-----------------PVAICKSD---SCKVEGFLSKPGQGSGRNLGDRQYFFVNDR 175
LE P+ D + V+G +S+P G GRN DRQ++++N R
Sbjct: 324 LELRFKVKPDRTVLRALGLPIDSTSEDLGTTVLVKGLMSRPAHGQGRNSPDRQFYYINGR 383
Query: 176 PVDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHAL 235
P K+SK VNE+YK N+ QYP+ + NFI+P+ + D+N+ P+KR +F E +++ AL
Sbjct: 384 PFTPSKISKCVNEVYKQFNTNQYPVLLANFILPSDSYDLNIDPNKRSIFLHSEGNLIEAL 443
Query: 236 REGLQEIYSPNNASYSVNKVEQL 258
RE L P +++S +++ +
Sbjct: 444 REALDSFCQPYRSTFSASQLTSI 466
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/62 (59%), Positives = 45/62 (72%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
TIR I+ V +I + QV+ DL +AVKELVENSLDAGAT I++ K YG E F+V DNG
Sbjct: 95 TIRAIDSHSVQKITSSQVVVDLQTAVKELVENSLDAGATIIDVKFKNYGLESFEVSDNGT 154
Query: 71 GI 72
GI
Sbjct: 155 GI 156
>gi|86161600|gb|ABC86933.1| PMS1 [Saccharomyces cerevisiae]
gi|259149279|emb|CAY82521.1| Pms1p [Saccharomyces cerevisiae EC1118]
Length = 873
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 92/204 (45%), Positives = 131/204 (64%), Gaps = 14/204 (6%)
Query: 611 KEDFGRMKVIGQFNLGFII--GKLDQ--DLFIVDQHAADEKYNFERLSQSTVLNQQPLLR 666
K DF +M+V+GQFNLGFII K+D DLFIVDQHA+DEKYNFE L TV Q L+
Sbjct: 668 KNDFKKMEVVGQFNLGFIIVTRKVDNKYDLFIVDQHASDEKYNFETLQAVTVFKSQKLII 727
Query: 667 PLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKD 726
P ++L+ +E+V ++ + KNGF L+ D G R +L ++P SK+ F + D +
Sbjct: 728 PQPVELSVIDELVVLDNLPVFEKNGFKLKIDEEEEFGSRVKLLSLPTSKQTLFDLGDFNE 787
Query: 727 LISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILE 786
LI + ++ G D++ S++R+M A RACRSSIMIG L + M +++
Sbjct: 788 LIHLIKEDGGL----------RRDNIRCSKIRSMFAMRACRSSIMIGKPLNKKTMTRVVH 837
Query: 787 HLADLNSPWNCPHGRPTMRHLVDL 810
+L++L+ PWNCPHGRPTMRHL++L
Sbjct: 838 NLSELDKPWNCPHGRPTMRHLMEL 861
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 94/183 (51%), Gaps = 22/183 (12%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAIC- 142
+ Q YA+I ++F N T K K+++L T +SS++ NI +VFG LE V +
Sbjct: 175 VIQGYAIINAAIKFSVWNITPKGKKNLILSTMRNSSMRKNISSVFGAGGMRGLEEVDLVL 234
Query: 143 ------------KSDS---------CKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPK 181
+D +V+G++S+ G GRN DRQ+ +VN RPV+
Sbjct: 235 DLNPFKNRMLGKYTDDPDFLDLDYKIRVKGYISQNSFGCGRNSKDRQFIYVNKRPVEYST 294
Query: 182 VSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQE 241
+ K NE+YK N+ Q+P +N +P DVNVTPDKR + +E +++ + L +
Sbjct: 295 LLKCCNEVYKTFNNVQFPAVFLNLELPMSLIDVNVTPDKRVILLHNERAVIDIFKTTLSD 354
Query: 242 IYS 244
Y+
Sbjct: 355 YYN 357
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 50/71 (70%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I IN VHRI +GQVI DL++AVKELV+NS+DA A IEI K+YG E + DNG G
Sbjct: 4 IHQINDIDVHRITSGQVITDLTTAVKELVDNSIDANANQIEIIFKDYGLESIECSDNGDG 63
Query: 72 ISPNNFKVRAV 82
I P+N++ A+
Sbjct: 64 IDPSNYEFLAL 74
>gi|242819382|ref|XP_002487307.1| DNA mismatch repair protein (Pms1), putative [Talaromyces
stipitatus ATCC 10500]
gi|218713772|gb|EED13196.1| DNA mismatch repair protein (Pms1), putative [Talaromyces
stipitatus ATCC 10500]
Length = 1012
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 98/237 (41%), Positives = 139/237 (58%), Gaps = 21/237 (8%)
Query: 589 ENEERKARALAAATTELERLFRKEDFGRMKVIGQFNLGFIIGK----LDQ-------DLF 637
E EE + L K+DF +M+++GQFNLGFI+ +D+ +LF
Sbjct: 731 EEEELFGKQQKTGEERLSLTVSKDDFAKMRIVGQFNLGFILATRSHGVDEPTAPTQDELF 790
Query: 638 IVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEED 697
I+DQHA+DEKYNFERL TV+ Q L+ P LDLT EE + + + KNGF +E D
Sbjct: 791 IIDQHASDEKYNFERLQAETVVQNQRLVHPKTLDLTAVEEEIIRENKAALEKNGFVIEVD 850
Query: 698 PHA--LAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCP- 754
G R +L ++P SK++ F V D+++LI L++ + + T+D+ P
Sbjct: 851 DTGDEPIGRRCKLISLPLSKEVVFDVRDLEELIVLLSEAPTARNSL------TSDTYVPR 904
Query: 755 -SRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
S+VR M A RACRSSIMIG L +M+K + ++ ++ PWNCPHGRPTMRHL+ L
Sbjct: 905 PSKVRKMFAMRACRSSIMIGKTLTVKQMEKAVRNMGTIDKPWNCPHGRPTMRHLMSL 961
Score = 126 bits (317), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 123/241 (51%), Gaps = 20/241 (8%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCL--- 136
+ V L YA I+ GVRF NT K + V+L T+ +SS++DNI V+G L
Sbjct: 183 KVVNLLNEYACISIGVRFSVKNTDSKKRQLVLLTTKANSSIRDNIANVYGAKTLLTLIPL 242
Query: 137 ------EPVAICKS-----DSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKL 185
EP A K + V G++S+P G GR DRQ ++VN RP +P+++K
Sbjct: 243 ELELEFEPSATGKRLNRDLNKIHVRGYVSRPVVGEGRGTRDRQMYYVNSRPCGIPQIAKA 302
Query: 186 VNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSP 245
NE+YK N Q P + +F + T A DVNV+PDKR + + +++ +L+E L +++
Sbjct: 303 FNEVYKTYNISQAPFVLADFQMDTNAYDVNVSPDKRTILLHESAALIESLKEALDQLFQE 362
Query: 246 NNAS-----YSVNKVEQLIEPE-KSGPSSGAESCMFLEQLSPDGNGCIEILNEQQISKGN 299
+ ++ NK + I+ +S P G + Q +P I++ + Q++ +
Sbjct: 363 AEQTVPQSRFTSNKQQTDIQQRFQSSPMGGITDRSRITQATPVEESQIDMSEQVQVTPQH 422
Query: 300 T 300
T
Sbjct: 423 T 423
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/59 (62%), Positives = 43/59 (72%)
Query: 20 VHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFK 78
VH+I +GQVI DL S VKELVENSLDA ATSIEI K G + +V DNG GI P N++
Sbjct: 22 VHQIQSGQVIVDLCSVVKELVENSLDAEATSIEIRFKNDGLDSIEVQDNGSGIDPRNYE 80
>gi|398364981|ref|NP_014317.4| Pms1p [Saccharomyces cerevisiae S288c]
gi|110282983|sp|P14242.3|PMS1_YEAST RecName: Full=DNA mismatch repair protein PMS1; AltName:
Full=Postmeiotic segregation protein 1
gi|86161598|gb|ABC86932.1| PMS1 [Saccharomyces cerevisiae]
gi|86161602|gb|ABC86934.1| PMS1 [Saccharomyces cerevisiae]
gi|86161604|gb|ABC86935.1| PMS1 [Saccharomyces cerevisiae]
gi|86161606|gb|ABC86936.1| PMS1 [Saccharomyces cerevisiae]
gi|151944452|gb|EDN62730.1| postmeiotic segregation protein [Saccharomyces cerevisiae YJM789]
gi|190409071|gb|EDV12336.1| DNA mismatch repair protein PMS1 [Saccharomyces cerevisiae RM11-1a]
gi|285814569|tpg|DAA10463.1| TPA: Pms1p [Saccharomyces cerevisiae S288c]
gi|392296909|gb|EIW08010.1| Pms1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 873
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 92/204 (45%), Positives = 131/204 (64%), Gaps = 14/204 (6%)
Query: 611 KEDFGRMKVIGQFNLGFII--GKLDQ--DLFIVDQHAADEKYNFERLSQSTVLNQQPLLR 666
K DF +M+V+GQFNLGFII K+D DLFIVDQHA+DEKYNFE L TV Q L+
Sbjct: 668 KNDFKKMEVVGQFNLGFIIVTRKVDNKYDLFIVDQHASDEKYNFETLQAVTVFKSQKLII 727
Query: 667 PLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKD 726
P ++L+ +E+V ++ + KNGF L+ D G R +L ++P SK+ F + D +
Sbjct: 728 PQPVELSVIDELVVLDNLPVFEKNGFKLKIDEEEEFGSRVKLLSLPTSKQTLFDLGDFNE 787
Query: 727 LISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILE 786
LI + ++ G D++ S++R+M A RACRSSIMIG L + M +++
Sbjct: 788 LIHLIKEDGGL----------RRDNIRCSKIRSMFAMRACRSSIMIGKPLNKKTMTRVVH 837
Query: 787 HLADLNSPWNCPHGRPTMRHLVDL 810
+L++L+ PWNCPHGRPTMRHL++L
Sbjct: 838 NLSELDKPWNCPHGRPTMRHLMEL 861
Score = 105 bits (263), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 94/183 (51%), Gaps = 22/183 (12%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAIC- 142
+ Q YA+I ++F N T K K+++L T +SS++ NI +VFG LE V +
Sbjct: 175 VIQGYAIINAAIKFSVWNITPKGKKNLILSTMRNSSMRKNISSVFGAGGMRGLEEVDLVL 234
Query: 143 ------------KSDS---------CKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPK 181
+D +V+G++S+ G GRN DRQ+ +VN RPV+
Sbjct: 235 DLNPFKNRMLGKYTDDPDFLDLDYKIRVKGYISQNSFGCGRNSKDRQFIYVNKRPVEYST 294
Query: 182 VSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQE 241
+ K NE+YK N+ Q+P +N +P DVNVTPDKR + +E +++ + L +
Sbjct: 295 LLKCCNEVYKTFNNVQFPAVFLNLELPMSLIDVNVTPDKRVILLHNERAVIDIFKTTLSD 354
Query: 242 IYS 244
Y+
Sbjct: 355 YYN 357
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 50/71 (70%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I IN VHRI +GQVI DL++AVKELV+NS+DA A IEI K+YG E + DNG G
Sbjct: 4 IHQINDIDVHRITSGQVITDLTTAVKELVDNSIDANANQIEIIFKDYGLESIECSDNGDG 63
Query: 72 ISPNNFKVRAV 82
I P+N++ A+
Sbjct: 64 IDPSNYEFLAL 74
>gi|154275042|ref|XP_001538372.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150414812|gb|EDN10174.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 1068
Score = 179 bits (455), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 106/302 (35%), Positives = 163/302 (53%), Gaps = 40/302 (13%)
Query: 535 SSSLDICSTLQFSIQDLRKRRQQRLSIMQSSCHTSGSVKMRRCFAAATLELSQPENEERK 594
+S++D+ ++ S+ ++ + +Q+ +TS ++ T EL +P + E
Sbjct: 739 ASTVDLVGSINGSLARIKAHVRLLQEELQNINNTSSTISE----GEITEELGEPGSSE-- 792
Query: 595 ARALAAATTELERLFRKEDFGRMKVIGQFNLGFII---------------GKLDQDLFIV 639
T L KEDF RM++IGQFNLGFII + ++FI+
Sbjct: 793 --------TRLSLSVSKEDFARMRIIGQFNLGFIIVTRPRGNPNDPRAFPSHKNDEVFII 844
Query: 640 DQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPH 699
DQHA+DEKYNFERL TV+ Q L++P L LT EE + ++ + KNGF +E D
Sbjct: 845 DQHASDEKYNFERLQAETVVQNQRLVKPKILTLTAVEEEIIIDNLPALEKNGFVVEVDRS 904
Query: 700 A--LAGLRFRLKAVPFSKKITFGVEDVKDLISTLADN---------QGECSIISSYKMDT 748
G R +L ++P SK++ F +D+++LI L ++ S+++ + +
Sbjct: 905 GDEPIGRRCKLTSLPLSKEMVFDTQDLEELIVLLGESPQTQSASSPSSSDSVLTPTTLGS 964
Query: 749 ADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLV 808
PS+VR M A RACRSSIMIG L +M +++ H+ ++ PWNCPHGRPTMRHL+
Sbjct: 965 KYIPRPSKVRKMFAMRACRSSIMIGKTLTNKQMDRVVRHMGMIDKPWNCPHGRPTMRHLM 1024
Query: 809 DL 810
L
Sbjct: 1025 SL 1026
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 62/182 (34%), Positives = 93/182 (51%), Gaps = 18/182 (9%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP- 138
+ + L AYA ++ GVRF N K VV T+ ++S +NI ++G I L P
Sbjct: 173 KVLGLLHAYACVSTGVRFNVKNQMPKGKSVVVFATKSNTSTSENISNIYGAKILLALTPL 232
Query: 139 ---------------VAICKSDSCK--VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPK 181
+ +D K V+G +S+P G GR DRQ FFVN RP LP+
Sbjct: 233 DLELEFKPSGMGKRLIGAGTNDPNKIFVQGHISRPIFGEGRQTPDRQMFFVNSRPCGLPQ 292
Query: 182 VSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQE 241
++K NE+YK N Q P +F + T + DVNV+PDKR + D +++ +L+ L E
Sbjct: 293 IAKAFNEVYKSFNISQSPFIFADFKMDTNSYDVNVSPDKRTILLHDAGALIESLKVSLTE 352
Query: 242 IY 243
++
Sbjct: 353 LF 354
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 52/72 (72%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
TI+ I VH+I +GQVI DL S VKELVENSLDAGATS++I K G + +V DNG
Sbjct: 3 TIKAIEARSVHQIQSGQVIVDLCSVVKELVENSLDAGATSLDIRFKNNGLDLIEVQDNGK 62
Query: 71 GISPNNFKVRAV 82
GISP++++ A+
Sbjct: 63 GISPDDYETVAL 74
>gi|172203|gb|AAA34885.1| DNA mismatch repair protein [Saccharomyces cerevisiae]
Length = 904
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 91/204 (44%), Positives = 131/204 (64%), Gaps = 14/204 (6%)
Query: 611 KEDFGRMKVIGQFNLGFII--GKLDQ--DLFIVDQHAADEKYNFERLSQSTVLNQQPLLR 666
K DF +M+V+GQFNLGFII K+D DLFIVDQHA+DEKYNFE L TV Q L+
Sbjct: 699 KNDFKKMEVVGQFNLGFIIVTRKVDNKSDLFIVDQHASDEKYNFETLQAVTVFKSQKLII 758
Query: 667 PLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKD 726
P ++L+ +E+V ++ + KNGF L+ D G R +L ++P SK+ F + D +
Sbjct: 759 PQPVELSVIDELVVLDNLPVFEKNGFKLKIDEEEEFGSRVKLLSLPTSKQTLFDLGDFNE 818
Query: 727 LISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILE 786
LI + ++ G D++ S++R+M A RACRSSIMIG L + M +++
Sbjct: 819 LIHLIKEDGGL----------RRDNIRCSKIRSMFAMRACRSSIMIGKPLNKKTMTRVVH 868
Query: 787 HLADLNSPWNCPHGRPTMRHLVDL 810
+L++L+ PWNCPHGRPTMRHL+++
Sbjct: 869 NLSELDKPWNCPHGRPTMRHLMEI 892
Score = 105 bits (263), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 94/183 (51%), Gaps = 22/183 (12%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAIC- 142
+ Q YA+I ++F N T K K+++L T +SS++ NI +VFG LE V +
Sbjct: 206 VIQGYAIINAAIKFSVWNITPKGKKNLILSTMRNSSMRKNISSVFGAGGMRGLEEVDLVL 265
Query: 143 ------------KSDS---------CKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPK 181
+D +V+G++S+ G GRN DRQ+ +VN RPV+
Sbjct: 266 DLNPFKNRMLGKYTDDPDFLDLDYKIRVKGYISQNSFGCGRNSKDRQFIYVNKRPVEYST 325
Query: 182 VSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQE 241
+ K NE+YK N+ Q+P +N +P DVNVTPDKR + +E +++ + L +
Sbjct: 326 LLKCCNEVYKTFNNVQFPAVFLNLELPMSLIDVNVTPDKRVILLHNERAVIDIFKTTLSD 385
Query: 242 IYS 244
Y+
Sbjct: 386 YYN 388
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 50/71 (70%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I IN VHRI +GQVI DL++AVKELV+NS+DA A IEI K+YG E + DNG G
Sbjct: 35 IHQINDIDVHRITSGQVITDLTTAVKELVDNSIDANANQIEIIFKDYGLESIECSDNGDG 94
Query: 72 ISPNNFKVRAV 82
I P+N++ A+
Sbjct: 95 IDPSNYEFLAL 105
>gi|207341693|gb|EDZ69678.1| YNL082Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 420
Score = 179 bits (454), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 92/204 (45%), Positives = 131/204 (64%), Gaps = 14/204 (6%)
Query: 611 KEDFGRMKVIGQFNLGFII--GKLDQ--DLFIVDQHAADEKYNFERLSQSTVLNQQPLLR 666
K DF +M+V+GQFNLGFII K+D DLFIVDQHA+DEKYNFE L TV Q L+
Sbjct: 215 KNDFKKMEVVGQFNLGFIIVTRKVDNKYDLFIVDQHASDEKYNFETLQAVTVFKSQKLII 274
Query: 667 PLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKD 726
P ++L+ +E+V ++ + KNGF L+ D G R +L ++P SK+ F + D +
Sbjct: 275 PQPVELSVIDELVVLDNLPVFEKNGFKLKIDEEEEFGSRVKLLSLPTSKQTLFDLGDFNE 334
Query: 727 LISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILE 786
LI + ++ G D++ S++R+M A RACRSSIMIG L + M +++
Sbjct: 335 LIHLIKEDGGL----------RRDNIRCSKIRSMFAMRACRSSIMIGKPLNKKTMTRVVH 384
Query: 787 HLADLNSPWNCPHGRPTMRHLVDL 810
+L++L+ PWNCPHGRPTMRHL++L
Sbjct: 385 NLSELDKPWNCPHGRPTMRHLMEL 408
>gi|71064118|gb|AAZ22526.1| Pms1p [Saccharomyces cerevisiae]
Length = 877
Score = 179 bits (454), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 91/204 (44%), Positives = 131/204 (64%), Gaps = 14/204 (6%)
Query: 611 KEDFGRMKVIGQFNLGFII--GKLDQ--DLFIVDQHAADEKYNFERLSQSTVLNQQPLLR 666
K DF +M+V+GQFNLGFII K+D DLFIVDQHA+DEKYNFE L TV Q L+
Sbjct: 672 KNDFKKMEVVGQFNLGFIIVTRKVDNKYDLFIVDQHASDEKYNFETLQAVTVFKSQKLII 731
Query: 667 PLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKD 726
P ++L+ +E+V ++ + KNGF L+ D G R +L ++P SK+ F + D +
Sbjct: 732 PQPVELSVIDELVVLDNLPVFEKNGFKLKIDEEEEFGSRVKLLSLPTSKQTLFDLGDFNE 791
Query: 727 LISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILE 786
LI + ++ G D++ S++R+M A RAC+SSIMIG L + M +++
Sbjct: 792 LIHLIKEDGGL----------RRDNIRCSKIRSMFAMRACKSSIMIGKPLNKKTMTRVVH 841
Query: 787 HLADLNSPWNCPHGRPTMRHLVDL 810
+L++L+ PWNCPHGRPTMRHL++L
Sbjct: 842 NLSELDKPWNCPHGRPTMRHLMEL 865
Score = 105 bits (263), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 96/188 (51%), Gaps = 22/188 (11%)
Query: 79 VRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP 138
+ + + Q YA+I ++F N T K K+++L T +SS++ NI +VFG LE
Sbjct: 170 TKCLTVIQGYAIINAAIKFSVWNITPKGKKNLILSTMRNSSMRKNISSVFGAGGMRGLEE 229
Query: 139 VAIC-------------KSDS---------CKVEGFLSKPGQGSGRNLGDRQYFFVNDRP 176
V + +D +V+G++S+ G GRN DRQ+ +VN RP
Sbjct: 230 VDLVLDLNPFKNRMLGKYTDDPDFLDLDYKIRVKGYISQNSFGCGRNSKDRQFIYVNKRP 289
Query: 177 VDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALR 236
V+ + K NE+YK N+ Q+P +N +P DVNVTPDKR + +E +++ +
Sbjct: 290 VEYSTLLKCCNEVYKTFNNVQFPAVFLNLELPMSLIDVNVTPDKRVILLHNERAVIDIFK 349
Query: 237 EGLQEIYS 244
L + Y+
Sbjct: 350 TTLSDYYN 357
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 51/71 (71%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I IN VHRI +GQVI DL++AVKELV+NS+DA A+ IEI K+YG E + DNG G
Sbjct: 4 IHQINDIDVHRITSGQVITDLTTAVKELVDNSIDANASQIEIIFKDYGLESIECSDNGDG 63
Query: 72 ISPNNFKVRAV 82
I P+N++ A+
Sbjct: 64 IDPSNYEFLAL 74
>gi|19880918|gb|AAM00563.1|AF458976_6 PMS1 [Saccharomyces cerevisiae]
Length = 908
Score = 179 bits (453), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 91/204 (44%), Positives = 131/204 (64%), Gaps = 14/204 (6%)
Query: 611 KEDFGRMKVIGQFNLGFII--GKLDQ--DLFIVDQHAADEKYNFERLSQSTVLNQQPLLR 666
K DF +M+V+GQFNLGFII K+D DLFIVDQHA+DEKYNFE L TV Q L+
Sbjct: 703 KNDFKKMEVVGQFNLGFIIVTRKVDNKYDLFIVDQHASDEKYNFETLQAVTVFKSQKLII 762
Query: 667 PLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKD 726
P ++L+ +E+V ++ + KNGF L+ D G R +L ++P SK+ F + D +
Sbjct: 763 PQPVELSVIDELVVLDNLPVFEKNGFKLKIDEEEEFGSRVKLLSLPTSKQTLFDLGDFNE 822
Query: 727 LISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILE 786
LI + ++ G D++ S++R+M A RAC+SSIMIG L + M +++
Sbjct: 823 LIHLIKEDGGL----------RRDNIRCSKIRSMFAMRACKSSIMIGKPLNKKTMTRVVH 872
Query: 787 HLADLNSPWNCPHGRPTMRHLVDL 810
+L++L+ PWNCPHGRPTMRHL++L
Sbjct: 873 NLSELDKPWNCPHGRPTMRHLMEL 896
Score = 105 bits (263), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 94/183 (51%), Gaps = 22/183 (12%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAIC- 142
+ Q YA+I ++F N T K K+++L T +SS++ NI +VFG LE V +
Sbjct: 206 VIQGYAIINAAIKFSVWNITPKGKKNLILSTMRNSSMRKNISSVFGAGGMRGLEEVDLVL 265
Query: 143 ------------KSDS---------CKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPK 181
+D +V+G++S+ G GRN DRQ+ +VN RPV+
Sbjct: 266 DLNPFKNRMLGKYTDDPDFLDLDYKIRVKGYISQNSFGCGRNSKDRQFIYVNKRPVEYST 325
Query: 182 VSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQE 241
+ K NE+YK N+ Q+P +N +P DVNVTPDKR + +E +++ + L +
Sbjct: 326 LLKCCNEVYKTFNNVQFPAVFLNLELPMSLIDVNVTPDKRVILLHNERAVIDIFKTTLSD 385
Query: 242 IYS 244
Y+
Sbjct: 386 YYN 388
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 51/71 (71%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I IN VHRI +GQVI DL++AVKELV+NS+DA A+ IEI K+YG E + DNG G
Sbjct: 35 IHQINDIDVHRITSGQVITDLTTAVKELVDNSIDANASQIEIIFKDYGLESIECSDNGDG 94
Query: 72 ISPNNFKVRAV 82
I P+N++ A+
Sbjct: 95 IDPSNYEFLAL 105
>gi|452845086|gb|EME47019.1| hypothetical protein DOTSEDRAFT_69112 [Dothistroma septosporum NZE10]
Length = 1128
Score = 179 bits (453), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 97/230 (42%), Positives = 136/230 (59%), Gaps = 24/230 (10%)
Query: 599 AAATTELERLFRKEDFGRMKVIGQFNLGFIIG-------KLDQDLFIVDQHAADEKYNFE 651
A A + L K DF RM V+GQFN GF++ + D+FI+DQHAADEKYN+E
Sbjct: 872 AEAESRLSLTVIKSDFERMIVLGQFNQGFVLALRPAAESGGEDDIFIIDQHAADEKYNYE 931
Query: 652 RLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLE-------EDPHALAGL 704
RL ++ L Q L+RPL L+LT +E + H D ++ NGF +E E G
Sbjct: 932 RLQRTVTLQSQRLVRPLPLELTAVQEELLLTHSDALKANGFDVETTSYVTDEHEDVYPGH 991
Query: 705 RFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASR 764
+FRL +P SK+ TF + D+++L+ L++ S I P++V++MLA R
Sbjct: 992 QFRLLTLPMSKEKTFDLSDLEELLHLLSEQPAGGSFIPR----------PNKVQSMLAMR 1041
Query: 765 ACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIR 814
ACRSSIM+G L +M+K++ H+ ++ PWNCPHGRPTMRHL LT R
Sbjct: 1042 ACRSSIMVGKTLAFKQMEKVVRHMGEMEKPWNCPHGRPTMRHLAGLTEWR 1091
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 96/187 (51%), Gaps = 23/187 (12%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
+ + L AYA I GVRF +N K K+ V T+ +++ K+NI VFG L +
Sbjct: 173 KVISLLYAYACICVGVRFSVSNQMPKGKKASVFSTKSNTTTKENITNVFGAKTLLALVKL 232
Query: 140 -----------------------AICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRP 176
A +S +++G +SKP G GR DRQ FFVN RP
Sbjct: 233 DLKLEMSPSLGLSIQSARTWSTQATNRSSQVQLQGHISKPTFGEGRQAPDRQMFFVNSRP 292
Query: 177 VDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALR 236
LP+V+K +NE+YK N+ Q P N ++ T A DVNV+PDKR + D+ ++L L+
Sbjct: 293 CLLPQVAKAINEVYKSFNTSQSPFIFANLVMDTNAYDVNVSPDKRTIMLHDQTALLETLK 352
Query: 237 EGLQEIY 243
L E++
Sbjct: 353 AALTELF 359
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 52/72 (72%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
TI+ I VH+I +GQVI DL+S VKELVENSLDAGATSI++ + G + +V DNG
Sbjct: 3 TIKAIEVSSVHQIQSGQVIVDLNSVVKELVENSLDAGATSIDVRFRNQGLDSIEVQDNGR 62
Query: 71 GISPNNFKVRAV 82
GI+P++F A+
Sbjct: 63 GIAPDDFDTIAL 74
>gi|50305491|ref|XP_452705.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641838|emb|CAH01556.1| KLLA0C11319p [Kluyveromyces lactis]
Length = 923
Score = 178 bits (452), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 93/206 (45%), Positives = 125/206 (60%), Gaps = 18/206 (8%)
Query: 611 KEDFGRMKVIGQFNLGFII------GKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPL 664
K DF M ++GQFNLGFII G D LFIVDQHA+DEKYNFE L ++TV Q L
Sbjct: 718 KNDFQNMTIVGQFNLGFIIVTRCKEGAFD--LFIVDQHASDEKYNFEMLQKNTVFKSQSL 775
Query: 665 LRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDV 724
L L+L+ +E++ + D+ KNGF L D G R +L + P SK F D
Sbjct: 776 LSLKTLELSVIDELLVMEYKDVFSKNGFKLSIDQEEEPGQRIKLVSFPVSKNTMFTEYDF 835
Query: 725 KDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKI 784
+LI + +++G D ++ C S++R+M A RACRSSIMIG L M+K+
Sbjct: 836 HELIQLIREHEGH---------DMSNIRC-SKIRSMFAMRACRSSIMIGKPLSMRTMKKV 885
Query: 785 LEHLADLNSPWNCPHGRPTMRHLVDL 810
+ +L+DL PWNCPHGRPT+RHL++L
Sbjct: 886 VNNLSDLEKPWNCPHGRPTLRHLMEL 911
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 95/185 (51%), Gaps = 21/185 (11%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
R++ L Q+YA+I V+ +N K+++L + G S + N+++VFG N L +
Sbjct: 169 RSIDLIQSYAIIQTNVKISVSNVLPSGKKTLILSSIGKSDITRNLVSVFGSNAGKGLASI 228
Query: 140 AI---------------------CKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVD 178
+ K+ G +S G GR DRQY ++N RPVD
Sbjct: 229 DVDLDLSNIRHTSILPENQKEENASEFQVKITGQISMVSFGCGRASKDRQYVYINKRPVD 288
Query: 179 LPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREG 238
PKV+K +NE Y+ N+ QYP +++F V T+ D+NVTPDKR V E +L ALRE
Sbjct: 289 YPKVAKTINETYQSFNNVQYPSFVLDFRVGTKFLDLNVTPDKRTVSLHYEEYVLDALRES 348
Query: 239 LQEIY 243
LQ +
Sbjct: 349 LQLFF 353
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 44/66 (66%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ I +H+I +GQVI DL SA+KEL+ENSLDA A IEI K YG E + DNG G
Sbjct: 3 IQAIENADIHKITSGQVIVDLRSAIKELLENSLDAKADKIEIIFKNYGIESIECADNGVG 62
Query: 72 ISPNNF 77
IS ++
Sbjct: 63 ISEDDL 68
>gi|150865337|ref|XP_001384508.2| hypothetical protein PICST_58454 [Scheffersomyces stipitis CBS
6054]
gi|149386593|gb|ABN66479.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 809
Score = 178 bits (452), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 100/258 (38%), Positives = 150/258 (58%), Gaps = 29/258 (11%)
Query: 560 SIMQSSCHTSGSVKMRRCFAAATLELSQPENEERKARALAAATTELERLFRKEDFGRMKV 619
SI + CHTS + R +L+L + ++++ + ++ ++DF +MK+
Sbjct: 574 SIKEEMCHTSLNNNGNR-----SLKLLEIQDDQSLSYTIS-----------RKDFLKMKL 617
Query: 620 IGQFNLGFIIGKLD-QDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEV 678
IGQFNLGFI+ LD +LFI+DQHA+DEKYNFERL+Q + Q L+ P ++L+ +E+
Sbjct: 618 IGQFNLGFILVTLDDNNLFIIDQHASDEKYNFERLNQELSIKIQRLIVPQTIELSIIDEL 677
Query: 679 VASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGEC 738
+ H I NG+ A G R RL +P S+ + F + D ++LI+ + N
Sbjct: 678 LVIEHEQIFMSNGYQFTVVLEAKPGSRIRLNTMPSSRGVVFDLNDFQELINLVNTNPRNK 737
Query: 739 SIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCP 798
++ C S++R +LA RACRSSIMIG L R M K++++L+ L+ PWNCP
Sbjct: 738 NL-----------KC-SKIRNLLAMRACRSSIMIGQPLTRGRMTKVVQNLSQLDKPWNCP 785
Query: 799 HGRPTMRHLVDLTTIRKN 816
HGRPTMRHLV+ R N
Sbjct: 786 HGRPTMRHLVEFDHWRDN 803
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 61/162 (37%), Positives = 92/162 (56%), Gaps = 3/162 (1%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSS--SLKDNIITVFGMNIYNCLE 137
+A+ Y LI ++F N KS+ L ++G S ++ DN+ITVFG N L
Sbjct: 176 KAINFLTQYLLIYPEIKFSVFNVVNSK-KSLALSSRGGSKSTILDNMITVFGANGAKGLV 234
Query: 138 PVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQ 197
+ + S+ ++EG++S G GR++ DRQ+ F+N RPV L K+SK+VN++YK N Q
Sbjct: 235 ELKLLISEDIQIEGYISSYSFGLGRSVTDRQFMFINKRPVMLKKLSKIVNDVYKSFNHMQ 294
Query: 198 YPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGL 239
YPI I+N + A DVN+TPDK + E + +R L
Sbjct: 295 YPIFILNIAIDPSALDVNLTPDKGMIMIHSEQDLFEKIRLDL 336
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 48/74 (64%), Gaps = 4/74 (5%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ I++ V +I +GQVI DL S VKELVENS+DA +T IEI + YG + V DNG G
Sbjct: 3 IKSIDQKDVSKITSGQVIIDLKSIVKELVENSIDANSTKIEINFQNYGIDSISVTDNGKG 62
Query: 72 ISPNNFKVRAVFLC 85
I +F+ F+C
Sbjct: 63 IKKEDFE----FVC 72
>gi|326469732|gb|EGD93741.1| DNA mismatch repair protein [Trichophyton tonsurans CBS 112818]
Length = 1038
Score = 178 bits (452), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 107/277 (38%), Positives = 149/277 (53%), Gaps = 41/277 (14%)
Query: 575 RRCFAAATLELSQPENEERKARALAAATTELERLFRKEDFGRMKVIGQFNLGFIIG---- 630
RR + + L + E+ + A T+L K+DF RM++IGQFNLGFI+
Sbjct: 723 RRIQSLSNRGLHRGEDADDDGDQQIAPETKLSLAVSKKDFSRMRIIGQFNLGFILATRPG 782
Query: 631 -------------KLDQD-LFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEE 676
+ +QD LFI+DQHA+DEKYNFERL T + Q L++P LDLT E
Sbjct: 783 VVEDENSSSSPLAEQEQDELFIIDQHASDEKYNFERLQAETTVQNQRLVKPKTLDLTAVE 842
Query: 677 EVVASMHMDIIRKNGFSLEEDPHA--LAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD- 733
E V ++ + KNGF +E D G R +L ++P SK++ F D+++LI L++
Sbjct: 843 EEVIIDNLAALEKNGFIVEIDTSGDEPIGRRCKLISLPLSKEVVFDTRDLEELIVLLSEA 902
Query: 734 ------NQG--------------ECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIG 773
N G E S ++S PS+VR M A RACRSSIMIG
Sbjct: 903 PQQSQNNLGKRAREELESDAEYIEPSGVASTPFSDYLVPRPSKVRKMFAMRACRSSIMIG 962
Query: 774 DALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
L +M+ +++H+ ++ PWNCPHGRPTMRHLV L
Sbjct: 963 KNLTHRQMETVVKHMGTIDKPWNCPHGRPTMRHLVSL 999
Score = 43.1 bits (100), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 35/72 (48%), Gaps = 19/72 (26%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
TI+PI VH+I +GQVI DL + K G + +V DNG
Sbjct: 3 TIKPIEARSVHQIQSGQVIVDLY-------------------VRFKNNGLDLIEVQDNGH 43
Query: 71 GISPNNFKVRAV 82
GISPNN++ A+
Sbjct: 44 GISPNNYESLAL 55
>gi|302509070|ref|XP_003016495.1| hypothetical protein ARB_04784 [Arthroderma benhamiae CBS 112371]
gi|291180065|gb|EFE35850.1| hypothetical protein ARB_04784 [Arthroderma benhamiae CBS 112371]
Length = 1020
Score = 178 bits (452), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 106/277 (38%), Positives = 148/277 (53%), Gaps = 41/277 (14%)
Query: 575 RRCFAAATLELSQPENEERKARALAAATTELERLFRKEDFGRMKVIGQFNLGFIIG---- 630
RR + + L + E+ + A T+L K+DF RM++IGQFNLGFI+
Sbjct: 705 RRIQSLSNRGLHRGEDADDDGDQQIAPETKLSLAVSKKDFSRMRIIGQFNLGFILATRPG 764
Query: 631 -------------KLDQD-LFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEE 676
+ +QD LFI+DQHA+DEKYNFERL T + Q L++P LDLT E
Sbjct: 765 VTGDENSFSTPSAEQEQDELFIIDQHASDEKYNFERLQAETTVQNQRLVKPKTLDLTAVE 824
Query: 677 EVVASMHMDIIRKNGFSLEEDPHA--LAGLRFRLKAVPFSKKITFGVEDVKDLISTLADN 734
E V ++ + KNGF +E D G R +L ++P SK++ F D+++LI L++
Sbjct: 825 EEVIIDNLAALEKNGFIVEIDTSGDEPIGRRCKLISLPLSKEVVFDTRDLEELIVLLSEA 884
Query: 735 -QGECSIISSYKMDTADSVC--------------------PSRVRAMLASRACRSSIMIG 773
Q + + D DS PS+VR M A RACRSSIMIG
Sbjct: 885 PQQSQNNLGKRARDELDSDAEHIEPPGVASSPFSDYLVPRPSKVRKMFAMRACRSSIMIG 944
Query: 774 DALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
L +M+ +++H+ ++ PWNCPHGRPTMRHLV L
Sbjct: 945 KNLTHRQMETVVKHMGTIDKPWNCPHGRPTMRHLVSL 981
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 98/191 (51%), Gaps = 15/191 (7%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCL--- 136
+ + L AYA I+ GVRF N K VV T+ + + ++NI V+G L
Sbjct: 136 KVIALLHAYACISTGVRFNVKNQMPKGKSVVVFTTKSNPTTRENISNVYGTKTLLALMPL 195
Query: 137 ------EPVAICK------SDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSK 184
EP + K S+ V G +SKP G GR DRQ FFVN RP LP+++K
Sbjct: 196 DLNLEYEPSTVAKRFSSQASNKIFVHGHISKPVFGEGRQTPDRQMFFVNSRPCGLPQIAK 255
Query: 185 LVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYS 244
NE+YK N Q P NF + T A DVNV+PDKR + D +++ +L+ L E++
Sbjct: 256 AFNEVYKSFNLSQSPFIFANFEMDTSAYDVNVSPDKRTILLHDAGALIESLKASLTELFE 315
Query: 245 PNNASYSVNKV 255
+ + V+++
Sbjct: 316 NEDQTVPVSQL 326
>gi|326485120|gb|EGE09130.1| hypothetical protein TEQG_08828 [Trichophyton equinum CBS 127.97]
Length = 1039
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 107/277 (38%), Positives = 149/277 (53%), Gaps = 41/277 (14%)
Query: 575 RRCFAAATLELSQPENEERKARALAAATTELERLFRKEDFGRMKVIGQFNLGFIIG---- 630
RR + + L + E+ + A T+L K+DF RM++IGQFNLGFI+
Sbjct: 724 RRIQSLSNRGLHRGEDADDDGDQQIAPETKLSLAVSKKDFSRMRIIGQFNLGFILATRPG 783
Query: 631 -------------KLDQD-LFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEE 676
+ +QD LFI+DQHA+DEKYNFERL T + Q L++P LDLT E
Sbjct: 784 VVEDENSSSSPLAEQEQDELFIIDQHASDEKYNFERLQAETTVQNQRLVKPKTLDLTAVE 843
Query: 677 EVVASMHMDIIRKNGFSLEEDPHA--LAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD- 733
E V ++ + KNGF +E D G R +L ++P SK++ F D+++LI L++
Sbjct: 844 EEVIIDNLAALEKNGFIVEIDTSGDEPIGRRCKLISLPLSKEVVFDTRDLEELIVLLSEA 903
Query: 734 ------NQG--------------ECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIG 773
N G E S ++S PS+VR M A RACRSSIMIG
Sbjct: 904 PQQSQNNLGKRAREELESDAEYIEPSGVASTPFSDYLVPRPSKVRKMFAMRACRSSIMIG 963
Query: 774 DALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
L +M+ +++H+ ++ PWNCPHGRPTMRHLV L
Sbjct: 964 KNLTHRQMETVVKHMGTIDKPWNCPHGRPTMRHLVSL 1000
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/57 (61%), Positives = 38/57 (66%), Gaps = 9/57 (15%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSI---------EIALKEY 58
TI+PI VH+I +GQVI DL S VKELVENSLDAGATSI IALK Y
Sbjct: 3 TIKPIEARSVHQIQSGQVIVDLCSVVKELVENSLDAGATSIGIGTIRLINYIALKHY 59
>gi|451928628|pdb|4E4W|B Chain B, Structure Of The C-terminal Domain Of The Saccharomyces
Cerevisiae Mutl Alpha (mlh1/pms1) Heterodimer
Length = 239
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 92/204 (45%), Positives = 131/204 (64%), Gaps = 14/204 (6%)
Query: 611 KEDFGRMKVIGQFNLGFII--GKLDQ--DLFIVDQHAADEKYNFERLSQSTVLNQQPLLR 666
K DF +M+V+GQFNLGFII K+D DLFIVDQHA+DEKYNFE L TV Q L+
Sbjct: 34 KNDFKKMEVVGQFNLGFIIVTRKVDNKYDLFIVDQHASDEKYNFETLQAVTVFKSQKLII 93
Query: 667 PLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKD 726
P ++L+ +E+V ++ + KNGF L+ D G R +L ++P SK+ F + D +
Sbjct: 94 PQPVELSVIDELVVLDNLPVFEKNGFKLKIDEEEEFGSRVKLLSLPTSKQTLFDLGDFNE 153
Query: 727 LISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILE 786
LI + ++ G D++ S++R+M A RACRSSIMIG L + M +++
Sbjct: 154 LIHLIKEDGGL----------RRDNIRCSKIRSMFAMRACRSSIMIGKPLNKKTMTRVVH 203
Query: 787 HLADLNSPWNCPHGRPTMRHLVDL 810
+L++L+ PWNCPHGRPTMRHL++L
Sbjct: 204 NLSELDKPWNCPHGRPTMRHLMEL 227
>gi|213405255|ref|XP_002173399.1| DNA mismatch repair protein pms1 [Schizosaccharomyces japonicus
yFS275]
gi|212001446|gb|EEB07106.1| DNA mismatch repair protein pms1 [Schizosaccharomyces japonicus
yFS275]
Length = 800
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 92/216 (42%), Positives = 133/216 (61%), Gaps = 13/216 (6%)
Query: 601 ATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLN 660
A L+ K DF M++IGQFN GFII + Q+LFI+DQHA+DEKYN+E+L ++ VL+
Sbjct: 592 AEEHLDLSIHKSDFLCMRIIGQFNCGFIIVRHAQNLFIIDQHASDEKYNYEKLKRNCVLS 651
Query: 661 QQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFG 720
Q L+ P +L+L EE+ H+ II K GF + D A G R +L +VP S F
Sbjct: 652 AQDLVAPKQLNLAVNEELALLDHLPIIEKKGFRVTVDETAPIGKRCKLVSVPSSSHTIFD 711
Query: 721 VEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNE 780
V D+ +++ L D+ +M+ + S++ MLA +ACR SIM+G +L +E
Sbjct: 712 VSDLLEMLGLLVDHP---------EMEPSS----SKIEKMLAMKACRRSIMVGRSLTISE 758
Query: 781 MQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKN 816
M ++ HLA L+ PWNCPHGRPTMRHL+ L ++ +
Sbjct: 759 MTSVVRHLATLSKPWNCPHGRPTMRHLLRLRNLKAH 794
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/66 (66%), Positives = 55/66 (83%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
+IRPI+K +HRIC+GQVI D++SAVKELVENSLDAGAT+IEI K YG + +VVDNG
Sbjct: 2 SIRPIDKKSIHRICSGQVITDIASAVKELVENSLDAGATNIEIRFKHYGLDTIEVVDNGN 61
Query: 71 GISPNN 76
GIS ++
Sbjct: 62 GISSDD 67
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 67/135 (49%), Gaps = 5/135 (3%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
+A+ L Q YA+++ R + + + + L + + S+ NI+ VFG + + L
Sbjct: 172 KALVLLQMYAVVSVNKRILVYHQPKGGGRQLQLSSNKNPSMLKNIMNVFGTKVSSSL--- 228
Query: 140 AICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQYP 199
+ + G++S+P ++ + Q F+N RP+ PKV +L+ E+Y+ + Q P
Sbjct: 229 --TAWNDDFINGYISRPQIAGIKSSSEGQMLFLNGRPITHPKVHRLIMEVYRSFSVNQSP 286
Query: 200 IAIMNFIVPTRACDV 214
+N ++P D+
Sbjct: 287 FFAVNLVLPEDCYDI 301
>gi|302655606|ref|XP_003019589.1| hypothetical protein TRV_06385 [Trichophyton verrucosum HKI 0517]
gi|291183322|gb|EFE38944.1| hypothetical protein TRV_06385 [Trichophyton verrucosum HKI 0517]
Length = 1103
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 106/277 (38%), Positives = 148/277 (53%), Gaps = 41/277 (14%)
Query: 575 RRCFAAATLELSQPENEERKARALAAATTELERLFRKEDFGRMKVIGQFNLGFIIG---- 630
RR + + L + E+ + A T+L K+DF RM++IGQFNLGFI+
Sbjct: 788 RRIQSLSNRGLHRVEDADDDGDQQIAPETKLSLAVSKKDFSRMRIIGQFNLGFILATRPG 847
Query: 631 -------------KLDQD-LFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEE 676
+ +QD LFI+DQHA+DEKYNFERL T + Q L++P LDLT E
Sbjct: 848 VTGDENSFSTPSAEQEQDELFIIDQHASDEKYNFERLQAETTVQNQRLVKPKTLDLTAVE 907
Query: 677 EVVASMHMDIIRKNGFSLEEDPHA--LAGLRFRLKAVPFSKKITFGVEDVKDLISTLADN 734
E V ++ + KNGF +E D G R +L ++P SK++ F D+++LI L++
Sbjct: 908 EEVIIDNLAALEKNGFIVEIDTSGDEPIGRRCKLISLPLSKEVVFDTRDLEELIVLLSEA 967
Query: 735 -QGECSIISSYKMDTADSVC--------------------PSRVRAMLASRACRSSIMIG 773
Q + + D DS PS+VR M A RACRSSIMIG
Sbjct: 968 PQQSQNNLGKRARDELDSDAEHTEPPGVASSPFSDYLVPRPSKVRKMFAMRACRSSIMIG 1027
Query: 774 DALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
L +M+ +++H+ ++ PWNCPHGRPTMRHLV L
Sbjct: 1028 KNLTHRQMETVVKHMGTIDKPWNCPHGRPTMRHLVSL 1064
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 97/191 (50%), Gaps = 15/191 (7%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCL--- 136
+ + L AYA I+ GVRF N K VV T+ + + ++NI V+G L
Sbjct: 219 KVIALLHAYACISTGVRFNVKNQMPKGKSVVVFTTKSNPTTRENISNVYGTKTLLALMPL 278
Query: 137 ------EPVAICK------SDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSK 184
EP K S+ V G +SKP G GR DRQ FFVN RP LP+++K
Sbjct: 279 DLDLEYEPSTAAKRFSSQASNKIFVHGHISKPVFGEGRQTPDRQMFFVNSRPCGLPQIAK 338
Query: 185 LVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYS 244
NE+YK N Q P NF + T A DVNV+PDK+ + D +++ +L+ L E++
Sbjct: 339 AFNEVYKSFNLSQSPFIFANFEMDTSAYDVNVSPDKQTILLHDAGALIESLKASLTELFE 398
Query: 245 PNNASYSVNKV 255
+ + V+++
Sbjct: 399 NEDQTVPVSQL 409
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 54/75 (72%)
Query: 8 NSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVD 67
N TI+PI VH+I +GQVI DL S VKELVENSLDAGATSI++ K G + +V D
Sbjct: 46 NMATIKPIEARSVHQIQSGQVIVDLCSVVKELVENSLDAGATSIDVRFKNNGLDLIEVQD 105
Query: 68 NGCGISPNNFKVRAV 82
NG GISPNN++ A+
Sbjct: 106 NGHGISPNNYESLAL 120
>gi|255725688|ref|XP_002547773.1| predicted protein [Candida tropicalis MYA-3404]
gi|240135664|gb|EER35218.1| predicted protein [Candida tropicalis MYA-3404]
Length = 789
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/271 (36%), Positives = 155/271 (57%), Gaps = 25/271 (9%)
Query: 551 LRKRRQQRLSIMQSSC---HTSGSVKMRRCFAAATLELSQPENEERKARALAAATTELER 607
+K + L Q++C H GS++ + F T +++PE + AA
Sbjct: 533 FKKNKGSTLYKQQATCSSQHILGSLENLKKFET-TSPITKPEVQVNPDLEEAAIYH---- 587
Query: 608 LFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRP 667
K+DF MK+IGQFNLGFI+ + +LFI+DQHA+DEK+NFE+L + + QPL+ P
Sbjct: 588 -ISKQDFLDMKLIGQFNLGFILVNHNSNLFIIDQHASDEKFNFEKLMSNFQIKHQPLMMP 646
Query: 668 LKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDL 727
+ LDL +E++ + +I NGF L + + AG R L ++P K F V+D +L
Sbjct: 647 INLDLNIIDEMLVLDNQEIFNNNGFKLTINDNNSAGKRISLVSLPVYKNSMFTVDDFHEL 706
Query: 728 ISTLAD--NQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKIL 785
I+ + + N I S++R +LA +ACRSSIMIG +L +++M +I+
Sbjct: 707 INLINEQPNNKNLKI--------------SKIRKILAMKACRSSIMIGSSLKKSKMNEIV 752
Query: 786 EHLADLNSPWNCPHGRPTMRHLVDLTTIRKN 816
++L+ L+ PWNCPHGRPTMRHL++ + N
Sbjct: 753 KNLSTLDKPWNCPHGRPTMRHLIESKNLTYN 783
Score = 108 bits (271), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 95/167 (56%), Gaps = 5/167 (2%)
Query: 80 RAVFLCQAYALIAKGVRFVCTN-TTGKNVKSVVLKTQGS--SSLKDNIITVFGMNIYNCL 136
+A+ Y +I ++F N GK K+++L ++G +++ DN+I+VFG N L
Sbjct: 180 KAINFVINYLIIFPEIKFTVYNIVNGK--KNLILSSKGGDKTTIIDNLISVFGNNNNKNL 237
Query: 137 EPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSR 196
P+ I S+ + GF+S G GR+ DRQ+ +VN RP+ K+SK++NE+YK N
Sbjct: 238 LPLEIEISEDINLSGFISSYSFGLGRSSPDRQFLYVNKRPIVFKKLSKIINEIYKSFNHV 297
Query: 197 QYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIY 243
QYP I+N ++ DVN+ PDK + +E +L +RE L E Y
Sbjct: 298 QYPTFIINLVINPNLIDVNLIPDKTNILIHNESEVLELIREKLLEFY 344
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 44/69 (63%)
Query: 10 PTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNG 69
P+I+ I + + ++ + QVI DL S +KEL+ENS+DA A I+I YG + QV DNG
Sbjct: 4 PSIQSIGQADISKLTSSQVIIDLKSILKELIENSIDANADKIDITFTNYGIDSIQVQDNG 63
Query: 70 CGISPNNFK 78
GI +F+
Sbjct: 64 KGIQQGDFE 72
>gi|451928668|pdb|4FMN|B Chain B, Structure Of The C-terminal Domain Of The Saccharomyces
Cerevisiae Mutl Alpha (mlh1/pms1) Heterodimer Bound To A
Fragment Of Ntg2
gi|451928671|pdb|4FMO|B Chain B, Structure Of The C-terminal Domain Of The Saccharomyces
Cerevisiae Mutl Alpha (mlh1/pms1) Heterodimer Bound To A
Fragment Of Exo1
Length = 240
Score = 178 bits (451), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 92/204 (45%), Positives = 131/204 (64%), Gaps = 14/204 (6%)
Query: 611 KEDFGRMKVIGQFNLGFII--GKLDQ--DLFIVDQHAADEKYNFERLSQSTVLNQQPLLR 666
K DF +M+V+GQFNLGFII K+D DLFIVDQHA+DEKYNFE L TV Q L+
Sbjct: 35 KNDFKKMEVVGQFNLGFIIVTRKVDNKYDLFIVDQHASDEKYNFETLQAVTVFKSQKLII 94
Query: 667 PLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKD 726
P ++L+ +E+V ++ + KNGF L+ D G R +L ++P SK+ F + D +
Sbjct: 95 PQPVELSVIDELVVLDNLPVFEKNGFKLKIDEEEEFGSRVKLLSLPTSKQTLFDLGDFNE 154
Query: 727 LISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILE 786
LI + ++ G D++ S++R+M A RACRSSIMIG L + M +++
Sbjct: 155 LIHLIKEDGGL----------RRDNIRCSKIRSMFAMRACRSSIMIGKPLNKKTMTRVVH 204
Query: 787 HLADLNSPWNCPHGRPTMRHLVDL 810
+L++L+ PWNCPHGRPTMRHL++L
Sbjct: 205 NLSELDKPWNCPHGRPTMRHLMEL 228
>gi|407921118|gb|EKG14284.1| DNA mismatch repair protein [Macrophomina phaseolina MS6]
Length = 915
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 98/227 (43%), Positives = 129/227 (56%), Gaps = 35/227 (15%)
Query: 611 KEDFGRMKVIGQFNLGFIIG------------------------KLDQDLFIVDQHAADE 646
K DFGRM++IGQFNLGFI+ +LFI+DQHA+DE
Sbjct: 659 KSDFGRMRIIGQFNLGFILAVRPGSDVLSKSTTNPTSTPAPCTVSNADELFIIDQHASDE 718
Query: 647 KYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDP--HALAGL 704
K NFERL+ +T+L Q L+ P LDLT EE + H NGF L D A G
Sbjct: 719 KINFERLTNTTILAPQRLVHPHTLDLTAIEEEIILSHPSAFAANGFQLTTDTSGEAPVGN 778
Query: 705 RFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVC-PSRVRAMLAS 763
R L +P SK+ TF V D+++LI+ L++ SS + S+ PS+VR MLA
Sbjct: 779 RCSLLGLPVSKETTFTVSDLEELITLLSE--------SSLSPEKESSIPRPSKVRKMLAM 830
Query: 764 RACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
RACRSSIMIG L + +M++++ + ++ PWNCPHGRPTMRHL L
Sbjct: 831 RACRSSIMIGKTLTQRQMERVVRDMGAIDKPWNCPHGRPTMRHLATL 877
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 70/144 (48%), Gaps = 22/144 (15%)
Query: 108 KSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAIC----------------------KSD 145
K V T+ + + ++NI V+G L P+ + S
Sbjct: 8 KVSVFSTKANPTTRENIANVYGAKTLLALIPLDLTLEMTPTATGTQSTKNGSAQDDTNSR 67
Query: 146 SCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQYPIAIMNF 205
+++G +S+P G GR DRQ FFVN RP LP+VSK VNE+YK N Q P +
Sbjct: 68 EVRIKGHISRPVFGEGRQTPDRQMFFVNSRPCALPQVSKAVNEVYKSFNVTQSPFIFADL 127
Query: 206 IVPTRACDVNVTPDKRKVFFSDEC 229
++ T A DVNV+PDKR + D+
Sbjct: 128 VMDTNAYDVNVSPDKRTILLHDQT 151
>gi|448521759|ref|XP_003868568.1| Pms1 DNA mismatch repair factor [Candida orthopsilosis Co 90-125]
gi|380352908|emb|CCG25664.1| Pms1 DNA mismatch repair factor [Candida orthopsilosis]
Length = 881
Score = 177 bits (449), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/221 (41%), Positives = 131/221 (59%), Gaps = 14/221 (6%)
Query: 592 ERKARALAAATTELERLFR--KEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYN 649
+R+ T E E ++ K DF +MK++GQFNLGFI+ +LFI+DQHA+DEKYN
Sbjct: 661 KRRQNIKVNQTLEDEGIYHISKSDFLKMKLVGQFNLGFILVHHRDNLFIIDQHASDEKYN 720
Query: 650 FERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLK 709
FE+L ++ + QPL+RP L+L +E++ H + R NGF D G R L
Sbjct: 721 FEKLIENYSIQNQPLIRPQTLELNIIDEMLVIDHEAVFRHNGFKFTIDHEGKLGSRIVLI 780
Query: 710 AVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSS 769
++P K I F D +LI+ + + I C S++R +LA +ACRSS
Sbjct: 781 SLPVYKNIMFDTNDFMELINLVNEQPSNKHI-----------KC-SKIRNILAMKACRSS 828
Query: 770 IMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
IMIG L R +M +++++L+ L+ PWNCPHGRPTMRHL +L
Sbjct: 829 IMIGSPLSRGKMTQVVQNLSRLDKPWNCPHGRPTMRHLSEL 869
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
+I+ IN + +I +GQVI DL S +KEL+EN++DA + I + YG E V DNG
Sbjct: 3 SIQSINAVDISKITSGQVIIDLKSIIKELIENAIDAATSKIVVNFINYGIESITVQDNGK 62
Query: 71 GISPNNFK 78
GI +F+
Sbjct: 63 GIQKEDFE 70
>gi|190345899|gb|EDK37866.2| hypothetical protein PGUG_01964 [Meyerozyma guilliermondii ATCC
6260]
Length = 859
Score = 177 bits (448), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 91/203 (44%), Positives = 133/203 (65%), Gaps = 13/203 (6%)
Query: 611 KEDFGRMKVIGQFNLGFIIGKLD--QDLFIVDQHAADEKYNFERLSQSTVL-NQQPLLRP 667
K+DF +M+V+GQFNLGFI+ L+ +LFIVDQHA+DEKYNFERL+ ST + + Q L+ P
Sbjct: 654 KKDFTKMQVVGQFNLGFILVTLNGGNNLFIVDQHASDEKYNFERLANSTTMFHSQSLVVP 713
Query: 668 LKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDL 727
++L +E+ ++++ + NGF L+ D G R +L ++P S+ F D +L
Sbjct: 714 RNMELNALDEMTVLANLEVFKTNGFGLKVDEDEAPGHRVKLTSLPVSRTTVFDESDFHEL 773
Query: 728 ISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEH 787
I L + G SI + + V S++R +LASR+CRSSIMIG L + M+K++ +
Sbjct: 774 IH-LTNQAG--SINNKH-------VKCSKIRTILASRSCRSSIMIGQPLSTSTMKKVVHN 823
Query: 788 LADLNSPWNCPHGRPTMRHLVDL 810
L+ L+ PWNCPHGRPTMRHL +L
Sbjct: 824 LSHLDKPWNCPHGRPTMRHLTEL 846
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 91/186 (48%), Gaps = 20/186 (10%)
Query: 88 YALIAKGVRFVCTNTTGKNVKSVVLKTQGSS--SLKDNIITVFGMNIYNCLEPVA----- 140
Y LI +RF N T K ++L TQG S +K ++ V+G N LE V+
Sbjct: 181 YILIHPEIRFTVYNITAAKKKQMMLGTQGGSKADIKSCLLNVYGSNGTYGLESVSLEAKE 240
Query: 141 -------------ICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVN 187
+ K K EG +S G GR+ GDRQY ++N RPV+ + K VN
Sbjct: 241 LEVKFKLNAGDLPVLKRLDIKFEGMISNCSFGMGRSAGDRQYIYLNKRPVESRRFIKTVN 300
Query: 188 ELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNN 247
E+Y+ N+ Q+P+ ++N ++ D+NVTPDKR V +E + LR L + Y +
Sbjct: 301 EVYRSFNTVQFPVVVLNIVLDGDFLDINVTPDKRTVMIHNEDVLNDVLRHELTKFYESED 360
Query: 248 ASYSVN 253
VN
Sbjct: 361 TQIPVN 366
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 49/74 (66%), Gaps = 4/74 (5%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ I+ V RI +GQVI DL S VKELVEN++D+G+T I++ + G ++ ++ D+G G
Sbjct: 3 IKNIDSTEVQRITSGQVIVDLVSVVKELVENAIDSGSTKIDVTFSDSGLDYIKIEDDGSG 62
Query: 72 ISPNNFKVRAVFLC 85
I +F+ ++C
Sbjct: 63 IEEEDFE----YVC 72
>gi|240278280|gb|EER41787.1| DNA mismatch repair protein [Ajellomyces capsulatus H143]
Length = 1515
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 96/238 (40%), Positives = 135/238 (56%), Gaps = 26/238 (10%)
Query: 599 AAATTELERLFRKEDFGRMKVIGQFNLGFII---------------GKLDQDLFIVDQHA 643
+A T L KEDF RM++IGQFNLGFII + ++FI+DQHA
Sbjct: 1236 GSAETRLSLSVSKEDFARMRIIGQFNLGFIIVTRPRGNPNDSRAFPSHKNDEVFIIDQHA 1295
Query: 644 ADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHA--L 701
+DEKYNFERL TV+ Q L++P L LT EE + ++ + KNGF +E D
Sbjct: 1296 SDEKYNFERLQAETVVQNQRLVKPKILTLTAVEEEIIIDNLPTLEKNGFVVEVDRSGDEP 1355
Query: 702 AGLRFRLKAVPFSKKITFGVEDVKDLISTLADN---------QGECSIISSYKMDTADSV 752
G R +L ++P SK++ F +D+++LI L ++ S+++ +
Sbjct: 1356 IGRRCKLTSLPLSKEMVFDTQDLEELIVLLGESPQTQSASSPSSSDSVLTPTTFGSKYIP 1415
Query: 753 CPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
PS+VR M A RACRSSIMIG L +M ++ H+ ++ PWNCPHGRPTMRHL+ L
Sbjct: 1416 RPSKVRKMFAMRACRSSIMIGKTLTNKQMDCVVRHMGMIDKPWNCPHGRPTMRHLMSL 1473
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 90/178 (50%), Gaps = 18/178 (10%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP----- 138
L AYA I+ GVRF N K VV T+ ++S +NI ++G L P
Sbjct: 624 LLHAYACISTGVRFNVKNQMPKGKSVVVFATKSNTSTNENISNIYGAKTLLALTPLNLEL 683
Query: 139 -----------VAICKSDSCK--VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKL 185
+ +D K V+G +S+P G GR DRQ FFVN RP LP+++K
Sbjct: 684 EFKPSGMGKRLIGAGTNDPNKIFVQGHISRPIFGEGRQTPDRQMFFVNSRPCGLPQIAKA 743
Query: 186 VNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIY 243
NE+YK N Q P +F + T + DVNV+PDKR + D +++ +L+ L E++
Sbjct: 744 FNEVYKSFNISQSPFIFADFKMDTNSYDVNVSPDKRTILLHDAGALIESLKVSLTELF 801
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 50/68 (73%)
Query: 15 INKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISP 74
I +VH+I +GQVI DL S VKELVENSLDAGATS++I K G + +V DNG GISP
Sbjct: 454 IISALVHQIQSGQVIVDLCSVVKELVENSLDAGATSLDIRFKNNGLDLIEVQDNGKGISP 513
Query: 75 NNFKVRAV 82
++++ A+
Sbjct: 514 DDYETVAL 521
>gi|325096304|gb|EGC49614.1| DNA mismatch repair protein [Ajellomyces capsulatus H88]
Length = 1515
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 96/238 (40%), Positives = 135/238 (56%), Gaps = 26/238 (10%)
Query: 599 AAATTELERLFRKEDFGRMKVIGQFNLGFII---------------GKLDQDLFIVDQHA 643
+A T L KEDF RM++IGQFNLGFII + ++FI+DQHA
Sbjct: 1236 GSAETRLSLSVSKEDFARMRIIGQFNLGFIIVTRPRGNPNDSRAFPSHKNDEVFIIDQHA 1295
Query: 644 ADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHA--L 701
+DEKYNFERL TV+ Q L++P L LT EE + ++ + KNGF +E D
Sbjct: 1296 SDEKYNFERLQAETVVQNQRLVKPKILTLTAVEEEIIIDNLPTLEKNGFVVEVDRSGDEP 1355
Query: 702 AGLRFRLKAVPFSKKITFGVEDVKDLISTLADN---------QGECSIISSYKMDTADSV 752
G R +L ++P SK++ F +D+++LI L ++ S+++ +
Sbjct: 1356 IGRRCKLTSLPLSKEMVFDTQDLEELIVLLGESPQTQSASSPSSSDSVLTPTTFGSKYIP 1415
Query: 753 CPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
PS+VR M A RACRSSIMIG L +M ++ H+ ++ PWNCPHGRPTMRHL+ L
Sbjct: 1416 RPSKVRKMFAMRACRSSIMIGKTLTNKQMDCVVRHMGMIDKPWNCPHGRPTMRHLMSL 1473
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 90/178 (50%), Gaps = 18/178 (10%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP----- 138
L AYA I+ GVRF N K VV T+ ++S +NI ++G L P
Sbjct: 624 LLHAYACISTGVRFNVKNQMPKGKSVVVFATKSNTSTNENISNIYGAKTLLALTPLNLEL 683
Query: 139 -----------VAICKSDSCK--VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKL 185
+ +D K V+G +S+P G GR DRQ FFVN RP LP+++K
Sbjct: 684 EFKPSGMGKRLIGAGTNDPNKIFVQGHISRPIFGEGRQTPDRQMFFVNSRPCGLPQIAKA 743
Query: 186 VNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIY 243
NE+YK N Q P +F + T + DVNV+PDKR + D +++ +L+ L E++
Sbjct: 744 FNEVYKSFNISQSPFIFADFKMDTNSYDVNVSPDKRTILLHDAGALIESLKVSLTELF 801
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 50/68 (73%)
Query: 15 INKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISP 74
I +VH+I +GQVI DL S VKELVENSLDAGATS++I K G + +V DNG GISP
Sbjct: 454 IISALVHQIQSGQVIVDLCSVVKELVENSLDAGATSLDIRFKNNGLDLIEVQDNGKGISP 513
Query: 75 NNFKVRAV 82
++++ A+
Sbjct: 514 DDYETVAL 521
>gi|225557600|gb|EEH05886.1| DNA mismatch repair protein pms1 [Ajellomyces capsulatus G186AR]
Length = 1515
Score = 176 bits (447), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 96/238 (40%), Positives = 135/238 (56%), Gaps = 26/238 (10%)
Query: 599 AAATTELERLFRKEDFGRMKVIGQFNLGFII---------------GKLDQDLFIVDQHA 643
+A T L KEDF RM++IGQFNLGFII + ++FI+DQHA
Sbjct: 1236 GSAETRLSLSVSKEDFARMRIIGQFNLGFIIVTRPRGNPNDPRAFPSHKNDEVFIIDQHA 1295
Query: 644 ADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHA--L 701
+DEKYNFERL TV+ Q L++P L LT EE + ++ + KNGF +E D
Sbjct: 1296 SDEKYNFERLQAETVVQNQRLVKPKILTLTAVEEEIIIDNLPTLEKNGFVVEVDRSGDEP 1355
Query: 702 AGLRFRLKAVPFSKKITFGVEDVKDLISTLADN---------QGECSIISSYKMDTADSV 752
G R +L ++P SK++ F +D+++LI L ++ S+++ +
Sbjct: 1356 IGRRCKLTSLPLSKEMVFDTQDLEELIVLLGESPQTQSASSPSSSDSVLTPTTFGSKYIP 1415
Query: 753 CPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
PS+VR M A RACRSSIMIG L +M ++ H+ ++ PWNCPHGRPTMRHL+ L
Sbjct: 1416 RPSKVRKMFAMRACRSSIMIGKTLTNKQMDCVVRHMGMIDKPWNCPHGRPTMRHLMSL 1473
Score = 110 bits (276), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 90/178 (50%), Gaps = 18/178 (10%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP----- 138
L AYA I+ GVRF N K VV T+ ++S +NI ++G L P
Sbjct: 624 LLHAYACISTGVRFNVKNQMPKGKSVVVFATKSNTSTNENISNIYGAKTLLALTPLDLEL 683
Query: 139 -----------VAICKSDSCK--VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKL 185
+ +D K V+G +S+P G GR DRQ FFVN RP LP+++K
Sbjct: 684 EFKPSGMGKRLIGAGTNDPNKIFVQGHISRPIFGEGRQTPDRQMFFVNSRPCGLPQIAKA 743
Query: 186 VNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIY 243
NE+YK N Q P +F + T + DVNV+PDKR + D +++ +L+ L E++
Sbjct: 744 FNEVYKSFNISQSPFIFADFKMDTNSYDVNVSPDKRTILLHDAGALIESLKVSLTELF 801
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 50/68 (73%)
Query: 15 INKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISP 74
I +VH+I +GQVI DL S VKELVENSLDAGATS++I K G + +V DNG GISP
Sbjct: 454 IISALVHQIQSGQVIVDLCSVVKELVENSLDAGATSLDIRFKNNGLDLIEVQDNGKGISP 513
Query: 75 NNFKVRAV 82
++++ A+
Sbjct: 514 DDYETVAL 521
>gi|430811787|emb|CCJ30765.1| unnamed protein product [Pneumocystis jirovecii]
Length = 819
Score = 176 bits (447), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 91/211 (43%), Positives = 135/211 (63%), Gaps = 27/211 (12%)
Query: 604 ELERLFRKEDFGRMKVIGQFNLGFIIGKLDQ-------DLFIVDQHAADEKYNFERLSQS 656
+L K+DF MKVIGQFNLGFII L +LFI+DQHA+DEKY FE+L +
Sbjct: 623 QLNLALSKKDFFSMKVIGQFNLGFIIVSLPSHKEGSKLELFIIDQHASDEKYKFEKLLLN 682
Query: 657 TVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKK 716
T + QPLL+P +L+LT EE+V H++I+ KNGF +E D + G R +L ++P +K
Sbjct: 683 TTIESQPLLKPYQLNLTIIEEIVVMEHIEILEKNGFKIELDHNKKPGERCKLVSLPQNK- 741
Query: 717 ITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDAL 776
D++++IS L +N + D C +++R +LAS+ACRSS+M+GDAL
Sbjct: 742 ------DLEEMISKLQENPQK------------DVQC-NKIRNILASKACRSSVMVGDAL 782
Query: 777 GRNEMQKILEHLADLNSPWNCPHGRPTMRHL 807
+ M I++ + ++++PWNCPHGRPT+R +
Sbjct: 783 TLSTMYNIVKRMGEMDNPWNCPHGRPTIRMI 813
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 100/181 (55%), Gaps = 10/181 (5%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIY------ 133
+A+ + Q+YA+I G++ + TN K K + T+G+ +K+N+ + G +
Sbjct: 173 KALSMIQSYAIITTGIKLLVTNEQPKKPKIIHFSTRGNMHIKENVANLMGTRLLPTLMDI 232
Query: 134 NCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGA 193
NC ++I + +V G LSKP G +QY ++N RP LP++++ + E+YK
Sbjct: 233 NC--KLSILNLYNIEVSGLLSKPICGETYINAKKQYIYINSRPCILPQITRAIGEIYKMY 290
Query: 194 NSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASYSVN 253
N QYP ++N I+P + D+NV+ DKR +F E I+ L+ L +++ NAS ++
Sbjct: 291 NILQYPFILINLIMPKNSYDINVSVDKRTIFLHHEKEIICELKSILNDLFQ--NASEKID 348
Query: 254 K 254
+
Sbjct: 349 Q 349
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/46 (67%), Positives = 37/46 (80%)
Query: 27 QVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGI 72
QVI DLSSAVKEL+EN+LDAG+T IEI K YG E+ +V DNG G+
Sbjct: 20 QVILDLSSAVKELLENALDAGSTVIEIKFKNYGLEFLEVSDNGHGV 65
>gi|195120550|ref|XP_002004787.1| GI20105 [Drosophila mojavensis]
gi|193909855|gb|EDW08722.1| GI20105 [Drosophila mojavensis]
Length = 489
Score = 176 bits (446), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 92/197 (46%), Positives = 118/197 (59%), Gaps = 15/197 (7%)
Query: 601 ATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLN 660
A EL++ K DF RM++IGQFNLGFII KL+ DLFIVDQHAADEKYNFE L ++T L
Sbjct: 303 AEAELQKEITKADFKRMQIIGQFNLGFIIVKLEDDLFIVDQHAADEKYNFEMLQRNTQLE 362
Query: 661 QQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFG 720
Q L P L+LT E++ H+ + KNGF E D A + RL PFSK FG
Sbjct: 363 HQRLTVPQTLELTAVNEMILQDHLPVFEKNGFKFEIDAEAPPTRKIRLLGKPFSKNWEFG 422
Query: 721 VEDVKDLISTLADNQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGR- 778
ED+ +LI L D +VC PSR+RAM ASRACR S+M+G AL R
Sbjct: 423 KEDIDELIFMLQDA-------------PEGTVCRPSRIRAMFASRACRKSVMVGKALNRT 469
Query: 779 NEMQKILEHLADLNSPW 795
M++++ + ++ PW
Sbjct: 470 TTMRRLITQMGEIEQPW 486
>gi|68491028|ref|XP_710686.1| hypothetical protein CaO19.1605 [Candida albicans SC5314]
gi|68491047|ref|XP_710677.1| hypothetical protein CaO19.9173 [Candida albicans SC5314]
gi|46431910|gb|EAK91429.1| hypothetical protein CaO19.9173 [Candida albicans SC5314]
gi|46431920|gb|EAK91438.1| hypothetical protein CaO19.1605 [Candida albicans SC5314]
Length = 776
Score = 176 bits (445), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 87/206 (42%), Positives = 134/206 (65%), Gaps = 21/206 (10%)
Query: 611 KEDFGRMKVIGQFNLGFIIGKLD--QDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPL 668
K+DF +MK+IGQFNLGFII D +LFI+DQHA+DEKYNFE+L S +N Q L++P+
Sbjct: 560 KQDFLKMKLIGQFNLGFIIVDFDDNNNLFIIDQHASDEKYNFEKLMASFKINYQLLIKPI 619
Query: 669 KLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLI 728
KL+L+ ++++ + +I NGF L+ + + L +P + ITF ++D +L+
Sbjct: 620 KLELSVIDQMLVIDNQEIFHNNGFKLKINSTPVDN-EILLLTLPIYQNITFNLDDFNELL 678
Query: 729 STLADNQGECSIISSYKMDTADSVCP----SRVRAMLASRACRSSIMIGDALGRNEMQKI 784
+ ++ Q D V P S+++ +LA +ACRSSIMIG L +++M++I
Sbjct: 679 NLVSQQQ--------------DQVNPNLKCSKIKKILAMKACRSSIMIGTFLSKSKMREI 724
Query: 785 LEHLADLNSPWNCPHGRPTMRHLVDL 810
+ +L+ L+ PWNCPHGRPTMRHL+D+
Sbjct: 725 ISNLSTLDKPWNCPHGRPTMRHLIDI 750
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 99/186 (53%), Gaps = 10/186 (5%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQG--SSSLKDNIITVFGMNIYNCLE 137
+A+ Y +I ++F N N K ++L T+G ++++ DN+I+++G N L
Sbjct: 48 KAINFVINYLIIYPQIKFTIYNVLN-NHKKLILATKGGDNTTIIDNLISIYGNNNNKNLL 106
Query: 138 PVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQ 197
+ + ++ K+ G++S G GR+ DRQ+ ++N RP+ K+ KL+NE+YK N Q
Sbjct: 107 SLDLEITEDIKLVGYISSYSFGLGRSAPDRQFLYLNKRPIVFKKLYKLINEIYKSYNHVQ 166
Query: 198 YPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYS-------PNNASY 250
YPI I++ ++ D+N+ PDK V DE +IL + L E + P N +Y
Sbjct: 167 YPIYIIDIVINPNLVDINLLPDKTNVLIKDETTILQTIETKLSEFFEVQDTMIIPKNENY 226
Query: 251 SVNKVE 256
V E
Sbjct: 227 QVKNSE 232
>gi|238883807|gb|EEQ47445.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 910
Score = 176 bits (445), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 86/206 (41%), Positives = 134/206 (65%), Gaps = 21/206 (10%)
Query: 611 KEDFGRMKVIGQFNLGFIIGKLD--QDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPL 668
K+DF +MK+IGQFNLGFII D +LFI+DQHA+DEKYNFE+L S +N Q L++P+
Sbjct: 694 KQDFLKMKLIGQFNLGFIIVDFDDNNNLFIIDQHASDEKYNFEKLMASFKINYQLLIKPI 753
Query: 669 KLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLI 728
KL+L+ ++++ + +I NGF L+ + + L +P + ITF ++D +L+
Sbjct: 754 KLELSVIDQMLVIDNQEIFHNNGFKLKINSTPVDN-EILLLTLPIYQNITFNLDDFNELL 812
Query: 729 STLADNQGECSIISSYKMDTADSVCP----SRVRAMLASRACRSSIMIGDALGRNEMQKI 784
+ ++ Q D + P S+++ +LA +ACRSSIMIG L +++M++I
Sbjct: 813 NLVSQQQ--------------DQINPNLKCSKIKKILAMKACRSSIMIGTFLSKSKMREI 858
Query: 785 LEHLADLNSPWNCPHGRPTMRHLVDL 810
+ +L+ L+ PWNCPHGRPTMRHL+D+
Sbjct: 859 ISNLSTLDKPWNCPHGRPTMRHLIDI 884
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 99/186 (53%), Gaps = 10/186 (5%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQG--SSSLKDNIITVFGMNIYNCLE 137
+A+ Y +I ++F N N K ++L T+G ++++ DN+I+++G N L
Sbjct: 182 KAINFVINYLIIYPQIKFTIYNVLN-NHKKLILATKGGDNTTIIDNLISIYGNNNNKNLL 240
Query: 138 PVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQ 197
+ + ++ K+ G++S G GR+ DRQ+ ++N RP+ K+ KL+NE+YK N Q
Sbjct: 241 SLDLEITEDIKLVGYISSYSFGLGRSAPDRQFLYLNKRPIVFKKLYKLINEIYKSYNHVQ 300
Query: 198 YPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYS-------PNNASY 250
YPI I++ ++ D+N+ PDK V DE +IL + L E + P N +Y
Sbjct: 301 YPIYIIDIVINPNLVDINLLPDKTNVLIKDETTILQTIETKLSEFFEVQDTMIIPKNENY 360
Query: 251 SVNKVE 256
V E
Sbjct: 361 QVKNSE 366
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 46/70 (65%)
Query: 9 SPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDN 68
SP+I+ I+K + +I + QVI DL + +KEL+ENS+DA A I+I YG Q+ DN
Sbjct: 5 SPSIKTISKFDISKITSSQVIIDLKAIIKELIENSIDAHADKIDIIFHNYGVNSIQIQDN 64
Query: 69 GCGISPNNFK 78
G GI+ +F+
Sbjct: 65 GNGINVTDFE 74
>gi|171690870|ref|XP_001910360.1| hypothetical protein [Podospora anserina S mat+]
gi|170945383|emb|CAP71495.1| unnamed protein product [Podospora anserina S mat+]
Length = 1002
Score = 175 bits (444), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 91/211 (43%), Positives = 127/211 (60%), Gaps = 20/211 (9%)
Query: 611 KEDFGRMKVIGQFNLGFIIG---------KLDQDLFIVDQHAADEKYNFERLSQSTVLNQ 661
K DF +MK+IGQFNLGFI+ D +LFI+DQHA+DEKYNFERL +T +
Sbjct: 770 KTDFAKMKIIGQFNLGFILAVREGSSSPSDDDDELFIIDQHASDEKYNFERLQSTTTVQS 829
Query: 662 QPLLRPLKLDLTPEEEVVASMHMDIIRKNGF--SLEEDPHALAGLRFRLKAVPFSKKITF 719
Q L++P L LT EE + ++ + +NGF S++ + G R +L +P S++ TF
Sbjct: 830 QRLVQPKPLTLTALEEEIILENLVSLERNGFVVSVDTSGDSPVGSRCQLVTLPLSRETTF 889
Query: 720 GVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRN 779
+ D+++LI L DN + PS+VR M A RACRSSIMIG AL
Sbjct: 890 DLTDLEELIFLLGDNPSSSATTIPR---------PSKVRKMFAMRACRSSIMIGRALSGR 940
Query: 780 EMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
+M++++ ++ + PWNCPHGRPTMRHL L
Sbjct: 941 QMERVVRNMGGMEKPWNCPHGRPTMRHLCGL 971
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 97/198 (48%), Gaps = 19/198 (9%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCL--- 136
+ + L YA I GV+F + K + V+ T+G+ + ++NII VFG+ N L
Sbjct: 176 KVISLLNQYACIQTGVKFTVSQQPTKGKRMVLFSTKGNPTTRENIINVFGVKTMNALITM 235
Query: 137 ------EPVA------ICKSDSCKVE----GFLSKPGQGSGRNLGDRQYFFVNDRPVDLP 180
P A ++D E G +S+P G GR DRQ F+VN RP LP
Sbjct: 236 DLKLQLTPTAGPLVKGKARADGSNTEVRVLGHVSRPTPGEGRQTPDRQMFYVNGRPCGLP 295
Query: 181 KVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQ 240
+ K+ NE+Y+ N+ Q P + + T DVNV+PDKR + D+ +L LRE L
Sbjct: 296 QFVKVFNEVYRSYNASQLPFIFADIQLDTHLYDVNVSPDKRTILLHDQGQMLDNLRESLI 355
Query: 241 EIYSPNNASYSVNKVEQL 258
E++ + + ++ L
Sbjct: 356 ELFETQDVTIPTSQARGL 373
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 52/72 (72%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
TI+ I+ VH+I AGQVI DL S KELVENS+DAGAT+IE+ K G + +V DNG
Sbjct: 6 TIKAIDSSAVHQIQAGQVIVDLCSVAKELVENSVDAGATTIEVRFKNQGLDSIEVQDNGA 65
Query: 71 GISPNNFKVRAV 82
GI+P+N++ A+
Sbjct: 66 GIAPHNYQSVAL 77
>gi|294462532|gb|ADE76812.1| unknown [Picea sitchensis]
Length = 150
Score = 175 bits (444), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 87/149 (58%), Positives = 107/149 (71%), Gaps = 15/149 (10%)
Query: 682 MHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQG----- 736
MH+D RKNGF ED +A G RF L AVP+S+ ITFG+EDV++L+S LAD
Sbjct: 1 MHLDTFRKNGFDFVEDTNAPPGRRFLLSAVPYSQNITFGLEDVQELLSILADAPAPPTSE 60
Query: 737 -----ECSII--SSYKMDTADSV---CPSRVRAMLASRACRSSIMIGDALGRNEMQKILE 786
+CS + +SYK S+ CPSRVRAMLASRACRSS+MIGDAL + +M+ IL+
Sbjct: 61 VSDSLDCSDVCSNSYKKAIPQSISALCPSRVRAMLASRACRSSVMIGDALCKKDMETILQ 120
Query: 787 HLADLNSPWNCPHGRPTMRHLVDLTTIRK 815
HL+ LNSPWNCPHGRPTMRHLVDLTT+ +
Sbjct: 121 HLSTLNSPWNCPHGRPTMRHLVDLTTVYR 149
>gi|296812399|ref|XP_002846537.1| DNA mismatch repair protein pms1 [Arthroderma otae CBS 113480]
gi|238841793|gb|EEQ31455.1| DNA mismatch repair protein pms1 [Arthroderma otae CBS 113480]
Length = 1013
Score = 175 bits (443), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 101/253 (39%), Positives = 142/253 (56%), Gaps = 43/253 (16%)
Query: 600 AATTELERLFRKEDFGRMKVIGQFNLGFIIG----------------KLDQD-LFIVDQH 642
A T+L K DF +M++IGQFNLGFI+ +QD LFI+DQH
Sbjct: 723 APETKLSLAVSKADFSKMRIIGQFNLGFILAIRPGASRGDNSSLAGPSAEQDELFIIDQH 782
Query: 643 AADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHA-- 700
A+DEKYNFERL T + Q L++P LDLT EE V ++ + KNGF +E D
Sbjct: 783 ASDEKYNFERLQAETTVQNQRLVQPKTLDLTAVEEEVIIENLAALEKNGFIVEIDTSGDE 842
Query: 701 LAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD-------NQGECSIISSYKMDT----- 748
G R +L ++P SK++ F D+++LI L++ + G+ S ++ + D
Sbjct: 843 PIGRRCKLISLPLSKEVVFNTRDLEELIVLLSEAPQQSQNHHGKRS-MNEFNSDAEGADI 901
Query: 749 ---------ADSVC--PSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNC 797
+D + PS+VR M A RACRSSIMIG L +M+ +++H+ ++ PWNC
Sbjct: 902 EPPGISSPFSDHLVPRPSKVRKMFAMRACRSSIMIGKNLTHRQMESVVKHMGTIDKPWNC 961
Query: 798 PHGRPTMRHLVDL 810
PHGRPTMRHLV L
Sbjct: 962 PHGRPTMRHLVSL 974
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 96/191 (50%), Gaps = 15/191 (7%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCL--- 136
+ + L AYA I+ GVRF N K VV T+ + + ++NI V+G L
Sbjct: 135 KVLALLHAYACISTGVRFNVKNQMPKGKSVVVFTTKSNPTTRENISNVYGAKTLLALMPL 194
Query: 137 ------EPVAICKSDSCK------VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSK 184
EP K S K V G +SKP G GR DRQ FFVN RP LP+++K
Sbjct: 195 DLDLEFEPSPAAKRFSSKASNKIFVHGHISKPVFGEGRQTPDRQMFFVNSRPCGLPQIAK 254
Query: 185 LVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYS 244
NE+YK N Q P NF + T A DVNV+PDKR + D +++ L+ L E++
Sbjct: 255 AFNEVYKSFNLSQSPFIFANFEMDTAAYDVNVSPDKRTIMLHDAGALIECLKASLTELFE 314
Query: 245 PNNASYSVNKV 255
+ + V+++
Sbjct: 315 QEDQTVPVSQL 325
>gi|452986254|gb|EME86010.1| hypothetical protein MYCFIDRAFT_114414, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 983
Score = 174 bits (442), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 97/225 (43%), Positives = 129/225 (57%), Gaps = 24/225 (10%)
Query: 600 AATTELERLFRKEDFGRMKVIGQFNLGFIIGKL-------DQDLFIVDQHAADEKYNFER 652
AA + L K DF RM++IGQFNLGFI+ D DLFIVDQHAADEKYN+ER
Sbjct: 759 AAESRLSLTVTKPDFARMRIIGQFNLGFILAVRPAAEPGDDDDLFIVDQHAADEKYNYER 818
Query: 653 LSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLE-------EDPHALAGLR 705
L ++ L Q L+RP L LT +E V + D ++ NGF +E D + G R
Sbjct: 819 LQRTVTLQSQRLVRPKPLQLTATQEEVVLSNGDALKANGFEIETTSTVHDSDEPVMTGRR 878
Query: 706 FRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRA 765
RL +P SK+ TF + +D + ++S + + D P +V+ MLA RA
Sbjct: 879 CRLLTLPMSKEKTFDL----------SDLEELLHLLSEHPTGSLDIPRPRKVQRMLAMRA 928
Query: 766 CRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
CRSSIM+G L +M K++ H+ ++ PWNCPHGRPTMRHL L
Sbjct: 929 CRSSIMVGKTLTMAQMGKVVRHMGEMEKPWNCPHGRPTMRHLAGL 973
Score = 119 bits (297), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 98/184 (53%), Gaps = 23/184 (12%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFG---------MNIYN 134
L AYA ++ GVRF +NT K K V T+ +++ K+NI VFG ++++
Sbjct: 177 LLYAYACVSVGVRFSVSNTMPKGKKVTVFSTKSNTTTKENITNVFGAKSLLALVKLDLHL 236
Query: 135 CLEPVAICKSDSCK--------------VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLP 180
+ P S S + V+G +SKP G GR DRQ FFVN RP LP
Sbjct: 237 EMAPSIGPASQSARNWSTQATDREMEVRVQGHISKPIFGEGRQAPDRQMFFVNGRPCQLP 296
Query: 181 KVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQ 240
++ K E+YK N Q P N ++ T A DVNV+PDKR + D+ +++ +L+E L+
Sbjct: 297 QILKAFREVYKSFNVSQEPFIFANLVMNTNAYDVNVSPDKRTIMLHDQTAMIESLKEALR 356
Query: 241 EIYS 244
++++
Sbjct: 357 KLFN 360
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 49/72 (68%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
+I+ I VH I +GQVI DL S KELVEN+LDAGATSI+I K G + +V DNG
Sbjct: 3 SIKAIEHRSVHHIQSGQVIVDLQSVAKELVENALDAGATSIDIRFKNQGLDSIEVQDNGK 62
Query: 71 GISPNNFKVRAV 82
GI+P+++ A+
Sbjct: 63 GIAPDDYDTIAL 74
>gi|313234381|emb|CBY24580.1| unnamed protein product [Oikopleura dioica]
Length = 832
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 90/213 (42%), Positives = 135/213 (63%), Gaps = 19/213 (8%)
Query: 601 ATTELERLFRKEDFGRMKVIGQFNLGFII---GKLDQDLFIVDQHAADEKYNFERLSQST 657
A EL R F K+DF +++VIGQFN GFII G+L DLF++DQHA DEK+NFERL S
Sbjct: 627 AEDELTRKFSKKDFTKLQVIGQFNRGFIIVTVGQLKDDLFLIDQHACDEKFNFERL-MSK 685
Query: 658 VLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLE-EDPHALAGLRFRLKAVPFSKK 716
++ QPL+ ++ L P E+ + + + +K GF DP + + +R+ AVP K
Sbjct: 686 KIDSQPLVIGKRMTLNPGEDQILQDKVALFKKYGFDFNFSDPECVRDVSYRMTAVPRVGK 745
Query: 717 ITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDAL 776
T G EDV +++ + N+G+ + PS++R + A ACRSS+MIG+AL
Sbjct: 746 STLGEEDVHEMLFLI--NEGDFN------------PKPSKIRRINAMAACRSSVMIGEAL 791
Query: 777 GRNEMQKILEHLADLNSPWNCPHGRPTMRHLVD 809
+M+++L++++ ++ PWNCPHGRPTMRHLV+
Sbjct: 792 KTYQMERMLKNMSTMDQPWNCPHGRPTMRHLVN 824
Score = 104 bits (259), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 93/167 (55%), Gaps = 8/167 (4%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
RA+ +YALIA R V T G+++K+ + +T+ SLK I +V G I E V
Sbjct: 174 RALATMMSYALIANA-RIVVTTKNGRSMKTEI-QTRAGDSLKGKIASVLGGQISK--EEV 229
Query: 140 A---ICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSR 196
+ K+ K GF+SK G GR DRQ+FFVN RP+D P +S+++N+ ++ S+
Sbjct: 230 IEDHLQKARIFKFNGFISKTDSG-GRTSPDRQFFFVNGRPIDAPFLSRIINQEWRKVTSK 288
Query: 197 QYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIY 243
+YP+ ++N V A D+N+ PDKR V ++ R LQ I+
Sbjct: 289 KYPVVVLNIEVDQSAVDINLAPDKRTVLLQNQKHCQFRFRILLQNIW 335
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I +++ VH + QV+ L+ AVKELVEN+LDA A I + L + G E +V DNG G
Sbjct: 5 ISELDEKTVHSLSTNQVVVSLAVAVKELVENALDAKADKITVTLVDNGVELIEVKDNGSG 64
Query: 72 ISPNNF 77
IS +N+
Sbjct: 65 ISADNY 70
>gi|67540292|ref|XP_663920.1| hypothetical protein AN6316.2 [Aspergillus nidulans FGSC A4]
gi|40739510|gb|EAA58700.1| hypothetical protein AN6316.2 [Aspergillus nidulans FGSC A4]
gi|259479468|tpe|CBF69717.1| TPA: ATP-binding protein (Eurofung) [Aspergillus nidulans FGSC A4]
Length = 1228
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 100/247 (40%), Positives = 140/247 (56%), Gaps = 26/247 (10%)
Query: 585 LSQPENEERKARALAAATTE-LERLFRKEDFGRMKVIGQFNLGFIIGK------------ 631
LS E+E ++R A E L K+DF RM++ GQFNLGFI+
Sbjct: 723 LSSSEDELDESRLSQVAPEERLTLTVNKDDFARMRIHGQFNLGFILASRTTSTSHRAESD 782
Query: 632 ------LDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMD 685
+LFI+DQHA+DEK NFERL +T + Q L+ P +LDLT EE + +
Sbjct: 783 PASGLGFKDELFIIDQHASDEKINFERLQSTTTVQNQRLVHPKRLDLTAVEEEIVIENQV 842
Query: 686 IIRKNGFSLEEDPHA--LAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISS 743
I+ KNGF ++ D G R L ++P SK++ F V D+++LI+ L E S ++
Sbjct: 843 ILEKNGFVVDVDDSGDKPIGQRCSLLSLPLSKEVVFDVRDLEELIAILT----ETSTPNT 898
Query: 744 YKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPT 803
+ D PS+VR M A RACRSSIMIG L + +M++++ + ++ PWNCPHGRPT
Sbjct: 899 TGPEI-DIPRPSKVRKMFAMRACRSSIMIGKTLTQRQMERVVRDMGTIDKPWNCPHGRPT 957
Query: 804 MRHLVDL 810
MRHL L
Sbjct: 958 MRHLFSL 964
Score = 122 bits (307), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 93/175 (53%), Gaps = 16/175 (9%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV---- 139
L AYA I+ GVRF NT K VV T G+ + K+NI V+G L P+
Sbjct: 172 LLHAYACISTGVRFTIKNTQAKKT-VVVFATNGNPTTKENIANVYGAKTLLALIPLDLEL 230
Query: 140 -----------AICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNE 188
A K + +V G +S+P G GR DRQ FVN RP LP+++K +NE
Sbjct: 231 QFEPSVAETMMAGDKKSNIQVRGHISRPVFGEGRQTPDRQMLFVNSRPCALPQITKAINE 290
Query: 189 LYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIY 243
+YK N Q P +F + T A DVNV+PDKR + D +++ +L++ LQ+++
Sbjct: 291 VYKSFNLAQSPFVFADFHMDTNAYDVNVSPDKRTILLHDAGALIESLKQSLQKLF 345
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 42/55 (76%)
Query: 24 CAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFK 78
+GQVI DL+S +KELVENSLDAGATSIE+ + G + +V DNG GI+P N++
Sbjct: 11 SSGQVIVDLTSVIKELVENSLDAGATSIEVRFRNSGLDLIEVQDNGSGIAPENYE 65
>gi|302840656|ref|XP_002951883.1| hypothetical protein VOLCADRAFT_61856 [Volvox carteri f.
nagariensis]
gi|300262784|gb|EFJ46988.1| hypothetical protein VOLCADRAFT_61856 [Volvox carteri f.
nagariensis]
Length = 187
Score = 174 bits (441), Expect = 2e-40, Method: Composition-based stats.
Identities = 91/194 (46%), Positives = 119/194 (61%), Gaps = 23/194 (11%)
Query: 618 KVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLD---LTP 674
+V+GQFNLGFI+ + D+FIVDQHAA EK FERL +S VL +QPLL P+ L L P
Sbjct: 1 QVLGQFNLGFILARHGPDVFIVDQHAAAEKTTFERLQRSVVLTRQPLLVPMALPAGVLLP 60
Query: 675 EEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKI-TFGVEDVKDLISTLAD 733
++++ H+D+ R+NGF E G L +VP S+ G+EDV +L+ L
Sbjct: 61 VDQLIIREHIDVFRRNGFDFVE--RLPDGRLLLLSSVPVSRATGQLGMEDVVELVGMLRS 118
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNS 793
+G I RAMLASRACRSS+M+G L R EM+++L+ LADL
Sbjct: 119 GEGAGGI-----------------RAMLASRACRSSVMVGRPLNRGEMRRLLDGLADLRQ 161
Query: 794 PWNCPHGRPTMRHL 807
PWNCPHGRPTMRH+
Sbjct: 162 PWNCPHGRPTMRHV 175
>gi|453087474|gb|EMF15515.1| DNA mismatch repair protein MutL [Mycosphaerella populorum SO2202]
Length = 1008
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 100/227 (44%), Positives = 139/227 (61%), Gaps = 24/227 (10%)
Query: 599 AAATTELERLFRKEDFGRMKVIGQFNLGFII----GK---LDQDLFIVDQHAADEKYNFE 651
A A + L K DF RM+++GQFNLGFI+ GK + DLFI+DQHAADEKYN+E
Sbjct: 754 AEAESRLSLTVVKSDFARMQIVGQFNLGFILAIRPGKNLGEEDDLFIIDQHAADEKYNYE 813
Query: 652 RLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLE------EDPHALA-GL 704
RL ++ L Q L+RP +L+LT EE V + D ++ NGF +E E A+A G
Sbjct: 814 RLRRTVTLQSQRLVRPKQLELTAIEEEVILSNRDALKANGFEIETTSDATESDEAVAPGS 873
Query: 705 RFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASR 764
R RL +P S++ TF + D+++L+ L++ S D P +V+ MLA R
Sbjct: 874 RCRLLTLPMSREKTFDLSDLEELLHLLSEEPPGSS----------DVPRPMKVQRMLAMR 923
Query: 765 ACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLT 811
ACRSSIM+G L +M+K++ H+ ++ PWNCPHGRPTMRHL L+
Sbjct: 924 ACRSSIMVGKTLTHAQMKKVINHMGEMEKPWNCPHGRPTMRHLAGLS 970
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 98/188 (52%), Gaps = 23/188 (12%)
Query: 79 VRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP 138
+ + L +YA I+ GVRF +NT K+ K+ V T+ +++ K+NI VFG L
Sbjct: 172 TKVINLMYSYACISTGVRFSVSNTMPKSKKAPVFATKANATTKENITNVFGAKTALALAK 231
Query: 139 V-----------------------AICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDR 175
+ A +S ++EG +SKP G GR DRQ +FVN R
Sbjct: 232 LDLNLEMAPSMGLSTPGAKGWSTQATDRSMIVRIEGHVSKPIFGEGRQAPDRQMYFVNGR 291
Query: 176 PVDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHAL 235
P LP+V+K VNE+YK N Q P + N I+ T A DVNV+PDKR + D+ ++L
Sbjct: 292 PCLLPQVAKAVNEVYKSFNVLQTPFVLANLIMDTNAYDVNVSPDKRSIMLHDQTALLETF 351
Query: 236 REGLQEIY 243
+ L E++
Sbjct: 352 KSALTEMF 359
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 50/72 (69%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
TI+ I VH+I +GQVI DL S KELVENSLDAGATSIE+ K G + +V DNG
Sbjct: 3 TIKAIEDRSVHQIQSGQVIVDLCSVCKELVENSLDAGATSIELRFKNQGLDAIEVQDNGK 62
Query: 71 GISPNNFKVRAV 82
GI P++F+ A+
Sbjct: 63 GIGPDDFESIAL 74
>gi|241952218|ref|XP_002418831.1| DNA mismatch repair protein, putative; postmeiotic segregation
protein, putative [Candida dubliniensis CD36]
gi|223642170|emb|CAX44137.1| DNA mismatch repair protein, putative [Candida dubliniensis CD36]
Length = 911
Score = 174 bits (440), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 86/206 (41%), Positives = 132/206 (64%), Gaps = 21/206 (10%)
Query: 611 KEDFGRMKVIGQFNLGFIIGKLDQD--LFIVDQHAADEKYNFERLSQSTVLNQQPLLRPL 668
K+DF +MK+IGQFNLGFII D + LFI+DQHA+DEKYNFE+L + +N Q L++P+
Sbjct: 688 KQDFLKMKLIGQFNLGFIIVDFDNNNNLFIIDQHASDEKYNFEKLMTNFRINYQSLIKPI 747
Query: 669 KLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLI 728
KL+L+ ++++ + +I NGF L+ L L+ +P + I F ++D +L+
Sbjct: 748 KLELSVIDQMLVMDNQEIFHNNGFKLKI-KSTLVDNEIFLETLPVYQNIIFNLDDFYELL 806
Query: 729 STLADNQGECSIISSYKMDTADSVCP----SRVRAMLASRACRSSIMIGDALGRNEMQKI 784
+ + Q D V P S+++ +LA +ACRSSIMIG L +++M++I
Sbjct: 807 NLVNQQQ--------------DQVNPNLKCSKIKQILAMKACRSSIMIGTFLSKSKMKEI 852
Query: 785 LEHLADLNSPWNCPHGRPTMRHLVDL 810
+ +L+ L+ PWNCPHGRPTMRHL+D+
Sbjct: 853 ISNLSTLDKPWNCPHGRPTMRHLIDI 878
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 99/186 (53%), Gaps = 10/186 (5%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQG--SSSLKDNIITVFGMNIYNCLE 137
+A+ Y +I ++F N N K ++L T+G ++++ DN+I+V+G N L
Sbjct: 182 KAINFVINYLIIYPQIKFTIYNVVN-NHKKLILATKGGDNTTIIDNLISVYGNNNNKNLL 240
Query: 138 PVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQ 197
+ + ++ K+ G++S G GR+ DRQ+ ++N RP+ K+ KL+NE+YK N Q
Sbjct: 241 SLDLEITEDIKLVGYISSYSFGLGRSAPDRQFLYLNKRPIIFKKLYKLINEIYKSYNHVQ 300
Query: 198 YPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYS-------PNNASY 250
YPI I++ ++ D+N+ PDK V DE +IL + L E + P N SY
Sbjct: 301 YPIYIIDIVINPNLVDINLLPDKTNVLIKDETTILQIIETKLSEFFELQDNMIIPKNESY 360
Query: 251 SVNKVE 256
V E
Sbjct: 361 QVKNSE 366
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 47/70 (67%)
Query: 9 SPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDN 68
SP+I+ INK + +I + QVI DL + +KEL+ENS+DA A I+I YG + Q+ DN
Sbjct: 5 SPSIKTINKFDISKITSSQVIIDLKAIIKELIENSIDAHANKIDIIFHNYGVDSIQIQDN 64
Query: 69 GCGISPNNFK 78
G GI+ +F+
Sbjct: 65 GNGINSTDFE 74
>gi|146420678|ref|XP_001486293.1| hypothetical protein PGUG_01964 [Meyerozyma guilliermondii ATCC
6260]
Length = 859
Score = 173 bits (438), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 93/217 (42%), Positives = 136/217 (62%), Gaps = 13/217 (5%)
Query: 597 ALAAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLD--QDLFIVDQHAADEKYNFERLS 654
A A +L L K+DF +M+V+GQFNLGFI+ L+ +LFIVDQHA+DEKYNFERL+
Sbjct: 640 AREEAEKKLVYLISKKDFTKMQVVGQFNLGFILVTLNGGNNLFIVDQHASDEKYNFERLA 699
Query: 655 QSTVL-NQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPF 713
ST + + Q L+ P ++L +E+ ++++ + NGF L+ D G R +L ++P
Sbjct: 700 NSTTMFHSQLLVVPRNMELNALDEMTVLANLEVFKTNGFGLKVDEDEAPGHRVKLTSLPV 759
Query: 714 SKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIG 773
+ F D +LI L + G SI + + V S++R +LA R+CRSSIMIG
Sbjct: 760 LRTTVFDESDFHELIH-LTNQAG--SINNKH-------VKCSKIRTILALRSCRSSIMIG 809
Query: 774 DALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
L + M+K++ +L+ L+ PWNCPHGRPTMRHL +L
Sbjct: 810 QPLSTSTMKKVVHNLSHLDKPWNCPHGRPTMRHLTEL 846
Score = 105 bits (263), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 91/186 (48%), Gaps = 20/186 (10%)
Query: 88 YALIAKGVRFVCTNTTGKNVKSVVLKTQGSS--SLKDNIITVFGMNIYNCLEPVA----- 140
Y LI +RF N T K ++L TQG S +K ++ V+G N LE V+
Sbjct: 181 YILIHPEIRFTVYNITAAKKKQMMLGTQGGSKADIKLCLLNVYGSNGTYGLELVSLEAKE 240
Query: 141 -------------ICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVN 187
+ K K EG +S G GR+ GDRQY ++N RPV+ + K VN
Sbjct: 241 LEVKFKLNAGDLPVLKRLDIKFEGMISNCSFGMGRSAGDRQYIYLNKRPVESRRFIKTVN 300
Query: 188 ELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNN 247
E+Y+ N+ Q+P+ ++N ++ D+NVTPDKR V +E + LR L + Y +
Sbjct: 301 EVYRSFNTVQFPVVVLNIVLDGDFLDINVTPDKRTVMIHNEDVLNDVLRHELTKFYESED 360
Query: 248 ASYSVN 253
VN
Sbjct: 361 TQIPVN 366
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 55/89 (61%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ I+ V RI +GQVI DL S VKELVEN++D+G+T I++ + G ++ ++ D+G G
Sbjct: 3 IKNIDSTEVQRITSGQVIVDLVSVVKELVENAIDSGSTKIDVTFSDSGLDYIKIEDDGSG 62
Query: 72 ISPNNFKVRAVFLCQAYALIAKGVRFVCT 100
I +F+ + + ++ +G+ V T
Sbjct: 63 IEEEDFEYVCLRHHTSKLVLFEGLAQVST 91
>gi|308503723|ref|XP_003114045.1| CRE-PMS-2 protein [Caenorhabditis remanei]
gi|308261430|gb|EFP05383.1| CRE-PMS-2 protein [Caenorhabditis remanei]
Length = 831
Score = 172 bits (435), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 91/210 (43%), Positives = 122/210 (58%), Gaps = 14/210 (6%)
Query: 601 ATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLN 660
A +L R KEDF MKVIGQFN GFII +L LFIVDQHA+DEKYNFERL S L
Sbjct: 629 AERQLSRSLTKEDFTNMKVIGQFNHGFIICRLRGHLFIVDQHASDEKYNFERLQNSAKLT 688
Query: 661 QQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFG 720
+QPL P L +E++ ++ I + NGF E + L+ L A P
Sbjct: 689 KQPLFTPTALGFGSVQELIIRENLPIFQANGFDFEFREND-GCLKTFLTARPELLNQQLT 747
Query: 721 VEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNE 780
D++++++ ++D + Y+ P R+R + AS+ACR S+MIG L + E
Sbjct: 748 NSDLEEILAVVSDYPNQM-----YR--------PVRIRNIFASKACRKSVMIGKPLDQRE 794
Query: 781 MQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
M +I+ HLA L+ PWNCPHGRPT+RHL L
Sbjct: 795 MTRIIRHLAKLDQPWNCPHGRPTIRHLATL 824
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/201 (28%), Positives = 96/201 (47%), Gaps = 30/201 (14%)
Query: 79 VRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIY----- 133
V+ + Q++AL+ V+ +CTN +++ G+SS++D + +FG
Sbjct: 188 VKLLSTVQSFALLCPHVKILCTNNIAGKKTNIICTPGGTSSVQDVVTNLFGSRRVENSKA 247
Query: 134 --NCLEPVAICKSDS------------------CKVEGFLSKPGQGSGRNLGDRQYFFVN 173
+ L P+ + D K+ GF+S G GR DRQ+ ++N
Sbjct: 248 GSSALIPILQEQPDFEIMTMHSIPMEETHFFELFKIRGFVSNCEHGCGRGTSDRQFVYIN 307
Query: 174 DRPVDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILH 233
+RPV+ +V ++N++YK N QYPI ++ FI DVNVTPDK+ V E +L
Sbjct: 308 NRPVEYTRVCTVINDVYKQFNKSQYPIIVL-FI----DIDVNVTPDKKTVMLEKERHLLA 362
Query: 234 ALREGLQEIYSPNNASYSVNK 254
+R + + Y S+S K
Sbjct: 363 VIRASMMKTYLKIVGSHSTVK 383
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 52/93 (55%), Gaps = 19/93 (20%)
Query: 12 IRPINKGVVHRICAGQVIK---------------DLSSAVKELVENSLDAGATSIEIALK 56
I I+K V R+ QV+K LSSA+++L++NS+DAGAT I+I +K
Sbjct: 6 IEKISKDVAERLTTAQVLKFFTFYVKIELLQVVVSLSSALRQLIDNSIDAGATIIDIRVK 65
Query: 57 EYGEEWFQVVDNGCGISPNNFKVRAVFLCQAYA 89
G + +V DNG GI +NF LC+A++
Sbjct: 66 NNGFDSIEVQDNGSGIESHNFDA----LCKAHS 94
>gi|398390628|ref|XP_003848774.1| hypothetical protein MYCGRDRAFT_48403 [Zymoseptoria tritici IPO323]
gi|339468650|gb|EGP83750.1| hypothetical protein MYCGRDRAFT_48403 [Zymoseptoria tritici IPO323]
Length = 1039
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 88/216 (40%), Positives = 129/216 (59%), Gaps = 23/216 (10%)
Query: 611 KEDFGRMKVIGQFNLGFIIG-------KLDQDLFIVDQHAADEKYNFERLSQSTVLNQQP 663
K DF RM+++GQFNLGF++ + + DLFI+DQHAADEKYN+ERL ++ L Q
Sbjct: 797 KSDFARMRIVGQFNLGFVLALRSGGGDREEDDLFIIDQHAADEKYNYERLQRTVTLQSQR 856
Query: 664 LLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPH------ALAGLRFRLKAVPFSKKI 717
L+RP L+LT E+ + H D ++ NGF +E H + RL +P SK+
Sbjct: 857 LVRPKVLELTAVEQEIIINHSDALKANGFDIESSSHLDEEGDEVGTRECRLLTLPMSKEK 916
Query: 718 TFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALG 777
TF + D+++ ++S ++A+ P +V+ MLA RACRSSIM+G L
Sbjct: 917 TFDLSDLEE----------LLHLLSEAPTNSAEIPRPKKVQKMLAMRACRSSIMVGRTLT 966
Query: 778 RNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTI 813
+M+K++ H+ ++ PWNCPHGRPTMRHL L +
Sbjct: 967 EAQMRKVVVHMGEMEKPWNCPHGRPTMRHLAGLGAV 1002
Score = 125 bits (315), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 100/188 (53%), Gaps = 23/188 (12%)
Query: 79 VRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFG--------- 129
+A+ L AYA I+ GVRF +N K K +V T+ +++ K+NI VFG
Sbjct: 172 TKAITLLYAYACISVGVRFTVSNLMPKGKKVIVFSTKSNTTTKENITNVFGTKTLLALIR 231
Query: 130 MNIYNCLEP--------------VAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDR 175
+++ +EP A ++ +VEG +S+P G GR DRQ FFVN R
Sbjct: 232 LDLRLEMEPRNGPSTQGARNWSTQAADRAMEVRVEGHISRPVFGEGRQAPDRQMFFVNSR 291
Query: 176 PVDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHAL 235
P LP+V+K NE+YK N Q P N I+ T A DVNV+PDKR + D+ ++L +L
Sbjct: 292 PCGLPQVAKAFNEVYKSFNVSQSPFVFANLIMDTNAYDVNVSPDKRTIMLHDQTALLESL 351
Query: 236 REGLQEIY 243
+ L ++
Sbjct: 352 KASLAGLF 359
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 53/72 (73%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
TI+ I + VH+I +GQVI DL+S VKELVENSLDAGATSIEI K G + +V DNG
Sbjct: 3 TIKAIEQRSVHQIQSGQVIVDLNSVVKELVENSLDAGATSIEIRFKNQGLDSIEVQDNGK 62
Query: 71 GISPNNFKVRAV 82
GI+P+++ A+
Sbjct: 63 GIAPDDYDTVAL 74
>gi|354545349|emb|CCE42077.1| hypothetical protein CPAR2_806260 [Candida parapsilosis]
Length = 880
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 84/200 (42%), Positives = 122/200 (61%), Gaps = 12/200 (6%)
Query: 611 KEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKL 670
K DF +MK+IGQFNLGFI+ ++FI+DQHA+DEKYNFE+L + + Q L++P L
Sbjct: 681 KSDFLKMKIIGQFNLGFILVNHGTNVFIIDQHASDEKYNFEKLIEQYSIQNQLLIKPHPL 740
Query: 671 DLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIST 730
+L +E++ H + R NGF + G R L ++P K I F D +LI+
Sbjct: 741 ELNIIDEMLVIDHEPVFRNNGFKFNINHEGKLGSRIVLTSLPVYKNIMFDTNDFMELINL 800
Query: 731 LADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLAD 790
+ + I C S++R +LA +ACRSSIMIG +L R++M +++ +L+
Sbjct: 801 INEQPSNKHI-----------KC-SKIRKILAMKACRSSIMIGSSLSRHKMTQVVRNLSR 848
Query: 791 LNSPWNCPHGRPTMRHLVDL 810
L+ PWNCPHGRPTMRHL +L
Sbjct: 849 LDKPWNCPHGRPTMRHLSEL 868
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 95/170 (55%), Gaps = 2/170 (1%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQG--SSSLKDNIITVFGMNIYNCLE 137
+AV Y LI ++F TNT K +VL ++G +++ +N+IT++G N L
Sbjct: 178 KAVNFIINYLLIYPEIKFEVTNTNSSGRKQLVLSSKGGENNTTVENLITIYGNNGNTSLL 237
Query: 138 PVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQ 197
V I K+ G++S G GR+ DRQ+ FVN RP+ K++ L+NE+YK N Q
Sbjct: 238 DVDIELDCDAKLSGYISSYSFGLGRSTPDRQFLFVNKRPIVFRKLTMLINEVYKSFNHVQ 297
Query: 198 YPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNN 247
YPI ++N + DVNV PDK V +E IL ++RE L E Y+ ++
Sbjct: 298 YPIYVLNLEIDPELIDVNVLPDKTNVLIHNEARILESIRESLVEFYTSHD 347
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 43/67 (64%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
+I+ I+K V ++ +GQV+ DL S KELVEN++DA A+ I + YG + V DNG
Sbjct: 3 SIQSIDKVDVSKLTSGQVVIDLRSLAKELVENAIDASASKIVVNFINYGIDSITVSDNGK 62
Query: 71 GISPNNF 77
GI ++F
Sbjct: 63 GIEKDDF 69
>gi|268557254|ref|XP_002636616.1| C. briggsae CBR-PMS-2 protein [Caenorhabditis briggsae]
Length = 797
Score = 171 bits (432), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/222 (41%), Positives = 132/222 (59%), Gaps = 24/222 (10%)
Query: 594 KARALAAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERL 653
K A A +L R K+DF +M++IGQFN GFII +L LFIVDQHA+DEKYNFERL
Sbjct: 588 KKEETADAERQLSRSLTKDDFTKMQIIGQFNHGFIICRLRGHLFIVDQHASDEKYNFERL 647
Query: 654 SQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSL---EEDPHALAGLRFRLKA 710
S L +QPL P+ L +E++ ++ I + NGF E+D L+ L A
Sbjct: 648 QNSAKLTKQPLFTPIALGFGSVQELIIRENLPIFQANGFDFDFREKD----GCLKTFLTA 703
Query: 711 VP--FSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRS 768
P S+++T D++++++ +++ + Y+ P R+R + AS+ACR
Sbjct: 704 RPELLSQQLTNS--DLEEILAVVSEYPNQM-----YR--------PVRIRNIFASKACRK 748
Query: 769 SIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
S+MIG L EM +I+ HL+ L+ PWNCPHGRPT+RHLV L
Sbjct: 749 SVMIGKPLNHREMTRIIRHLSKLDQPWNCPHGRPTIRHLVSL 790
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 96/200 (48%), Gaps = 24/200 (12%)
Query: 79 VRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGM----NIYN 134
V+ + Q++AL+ ++ +CTN +++ G+S+++D + +FGM N N
Sbjct: 173 VKLLATVQSFALLCPHIKILCTNNIAGKKTNIICTPGGTSTIQDVVTNLFGMRRIGNSKN 232
Query: 135 CLEPVAICKS--------------------DSCKVEGFLSKPGQGSGRNLGDRQYFFVND 174
V I + D K+ GF+S G GR DRQ+ ++N+
Sbjct: 233 GSALVPILQDQPDGEIMAMHSLQMEETQFFDLFKIRGFVSSCEHGCGRGTSDRQFVYINN 292
Query: 175 RPVDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHA 234
RPV+ +V + N++YK N QYPI ++ VP DVNVTPDK+ V E +L
Sbjct: 293 RPVEYMRVCSVTNDVYKQFNKNQYPIIVLFIDVPPEKIDVNVTPDKKTVMLEKERHLLAV 352
Query: 235 LREGLQEIYSPNNASYSVNK 254
+R + + Y S+S K
Sbjct: 353 IRASMMKTYLKIVGSHSTIK 372
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 49/78 (62%), Gaps = 4/78 (5%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I I+K V R+ QV+ LSSA+++L++NS+DAG+T I+I +K G + +V DNG G
Sbjct: 6 IEKISKDVAERLTTAQVVVSLSSALRQLIDNSIDAGSTIIDIRVKNNGYDSIEVQDNGSG 65
Query: 72 ISPNNFKVRAVFLCQAYA 89
I NF LC+ ++
Sbjct: 66 IETQNFDA----LCKPHS 79
>gi|323447423|gb|EGB03344.1| hypothetical protein AURANDRAFT_55567 [Aureococcus anophagefferens]
Length = 690
Score = 170 bits (431), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 84/205 (40%), Positives = 124/205 (60%), Gaps = 14/205 (6%)
Query: 611 KEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKL 670
K DF M+ +GQFNLGF++ +L LF+VDQHAADEK+ +E L + T ++ QPLL PL L
Sbjct: 490 KTDFSAMEALGQFNLGFLVCRLGDHLFLVDQHAADEKFRYEALWRDTRVDTQPLLAPLSL 549
Query: 671 DLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIST 730
DL EE+ + + GF L + A G R + +VP ++ TFGV D+++LI+
Sbjct: 550 DLGATEELALLERRCTVERVGFRLAVNDLAPPGRRVAVISVPSARGATFGVSDIRELITL 609
Query: 731 LADNQGECSIISSYKMDTADSVCPS--RVRAMLASRACRSSIMIGDALGRNEMQKILEHL 788
L D+ D+ P ++ + AS+ACR+++MIG L + +M ++L+HL
Sbjct: 610 LDDDAAH------------DTTLPKLPKLHTLFASKACRAAVMIGTPLIKTKMTQLLDHL 657
Query: 789 ADLNSPWNCPHGRPTMRHLVDLTTI 813
A L PWNCPHGRPT RHL + ++
Sbjct: 658 ATLLQPWNCPHGRPTTRHLAHVPSL 682
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 96/183 (52%), Gaps = 11/183 (6%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNV-KSVVLKTQGSSSLKDNIITVFGMNIYNCLEP 138
RA+ QA+AL+A G R T +G + + Q SL+++ +FG LE
Sbjct: 175 RALRTVQAHALVAVGCRLRLTLVSGGGATRRTAIAVQAPRSLRESASALFGHAFARSLEE 234
Query: 139 VAI----CKSDSCKVEGFLSKPG----QGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELY 190
V+ + S V G +S+ G G GDRQ+ FVN RP+D P+VS+ + +++
Sbjct: 235 VSFDLRGGEDCSLAVIGLMSRAGGFDAPGPRGGGGDRQFLFVNGRPIDAPRVSRCIGDVW 294
Query: 191 KG--ANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNA 248
+ + R P +++ VP A DVNV+PDKR V DE ++ ALR L +++ P+
Sbjct: 295 RSVEGDRRGRPAFVLDIRVPPSAVDVNVSPDKRDVVLDDETGLVAALRIALHDLWEPSRG 354
Query: 249 SYS 251
S++
Sbjct: 355 SFA 357
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 47/71 (66%), Gaps = 1/71 (1%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALK-EYGEEWFQVVDNGC 70
I I+ ++ +GQV+ DL+ AVKEL+EN+LDAGATSIE+ + + G + DNG
Sbjct: 5 IAKIDTASARKLSSGQVVVDLAGAVKELLENALDAGATSIELRINDDGGGAEIECADNGH 64
Query: 71 GISPNNFKVRA 81
GI+P +F + A
Sbjct: 65 GIAPRDFALVA 75
>gi|341892747|gb|EGT48682.1| CBN-PMS-2 protein [Caenorhabditis brenneri]
Length = 807
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 94/215 (43%), Positives = 127/215 (59%), Gaps = 24/215 (11%)
Query: 601 ATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLN 660
A +L R KEDF MKVIGQFN GFII +L LFIVDQHA+DEKYNFERL + L
Sbjct: 605 AEKQLSRSLTKEDFNSMKVIGQFNNGFIICRLRGHLFIVDQHASDEKYNFERLQNTAKLT 664
Query: 661 QQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSL---EEDPHALAGLRFRLKAVP--FSK 715
+QPL P L +E+V ++ I + NGF E+D L+ L A P S+
Sbjct: 665 KQPLFTPTALGFGSVQELVIRDNLPIFQANGFDFDFREKD----GCLKTFLTARPELLSQ 720
Query: 716 KITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDA 775
++T D+++++S ++D + Y+ P R+R + AS+ACR S+MIG
Sbjct: 721 QLTNS--DLEEILSVVSDYPNQM-----YR--------PVRIRNIFASKACRKSVMIGKP 765
Query: 776 LGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
L + EM +I+ HL+ L PWNCPHGRPT+RHL L
Sbjct: 766 LNQREMTRIIRHLSKLEQPWNCPHGRPTIRHLASL 800
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 96/201 (47%), Gaps = 25/201 (12%)
Query: 79 VRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMN-IYN--- 134
V+ + Q++AL+ ++ +CTN +++ G+S+++D + +FG I N
Sbjct: 173 VKLLSTVQSFALLCPHIKILCTNNIAGKKTNIICTPGGTSTVQDVVTNLFGARRIENSKT 232
Query: 135 ---CLEPVA------------------ICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVN 173
L P+ I D K+ GF+S G GR DRQ+ ++N
Sbjct: 233 GSSALIPIQQDSPNGEIMAIHSVPMEEIHFFDLFKIRGFVSNCEHGCGRGTSDRQFVYIN 292
Query: 174 DRPVDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILH 233
+RPV+ +V ++N++YK N QYPI ++ VP DVNVTPDK+ V E +L
Sbjct: 293 NRPVEYTRVCTVINDVYKQFNKNQYPIIVLFIDVPPEKIDVNVTPDKKTVMLEKERHLLA 352
Query: 234 ALREGLQEIYSPNNASYSVNK 254
+R + Y S+S K
Sbjct: 353 VIRASMMNTYLKIVGSHSTIK 373
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 48/78 (61%), Gaps = 4/78 (5%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I I+ V R+ QV+ LSSA+++L++NS+DAG+T I+I +K G E +V DNG G
Sbjct: 6 IAKISSDVAERLTTAQVVVSLSSALRQLIDNSIDAGSTIIDIRVKNNGFETIEVQDNGSG 65
Query: 72 ISPNNFKVRAVFLCQAYA 89
I NF LC+ ++
Sbjct: 66 IETQNFDA----LCKPHS 79
>gi|413922860|gb|AFW62792.1| hypothetical protein ZEAMMB73_370746 [Zea mays]
Length = 316
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 80/116 (68%), Positives = 96/116 (82%)
Query: 573 KMRRCFAAATLELSQPENEERKARALAAATTELERLFRKEDFGRMKVIGQFNLGFIIGKL 632
K RC+ AATL+++ P +E K+ +LAAAT EL+RLF K DF M+V+GQFNLGFIIGKL
Sbjct: 13 KTTRCYKAATLDITVPLADEAKSNSLAAATNELDRLFSKHDFREMEVVGQFNLGFIIGKL 72
Query: 633 DQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIR 688
QDLFIVDQHA+DEKYNFE LSQST+LN QPLL PL+LDL+PEEEV+ SM+M IR
Sbjct: 73 GQDLFIVDQHASDEKYNFECLSQSTILNVQPLLEPLRLDLSPEEEVIVSMNMSTIR 128
Score = 155 bits (393), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 77/112 (68%), Positives = 89/112 (79%), Gaps = 2/112 (1%)
Query: 686 IIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYK 745
+ RKNGF L ED HA G + LKAVPFSK ITFGV+DVK+LIS LAD+QG+CSIISSYK
Sbjct: 187 LFRKNGFVLAEDLHASPGNHYLLKAVPFSKNITFGVQDVKELISMLADSQGDCSIISSYK 246
Query: 746 MDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKIL--EHLADLNSPW 795
+DTADSVCPSRVRAMLASRACR S MIGD L + EM+K+L + + L PW
Sbjct: 247 LDTADSVCPSRVRAMLASRACRMSTMIGDPLTKAEMKKMLVKDSVHRLPLPW 298
>gi|344239648|gb|EGV95751.1| Mismatch repair endonuclease PMS2 [Cricetulus griseus]
Length = 1055
Score = 169 bits (429), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 105/246 (42%), Positives = 140/246 (56%), Gaps = 30/246 (12%)
Query: 544 LQFSIQDLRKRRQQRLSIMQSSCHTSGSVKMRRCFAAATLELSQPENEERKARALAAATT 603
L FS+ L KR +Q +Q + S + R F A ++ EN+ AA
Sbjct: 374 LDFSMSSLAKRMKQ----LQHQKQRNDSKQSYRKFRA---KICPGENQ--------AAED 418
Query: 604 ELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQP 663
EL + K F M+++GQFNLGFII KL +DLF+VDQHAADEKYNFE L Q TVL Q
Sbjct: 419 ELRKEISKSMFAEMEILGQFNLGFIITKLKEDLFLVDQHAADEKYNFEMLQQHTVLQVQR 478
Query: 664 LLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVED 723
L+ P L+LT E V +++I +KNGF D A R +L ++P SK TFG +D
Sbjct: 479 LITPQTLNLTAVNEAVLIENLEIFKKNGFDFVIDEDAPVTERAKLISLPTSKNWTFGPQD 538
Query: 724 VKDLISTLADNQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGRNEMQ 782
+ +LI L+D+ G +C PSRVR M ASRACR S+MIG AL +EM+
Sbjct: 539 IDELIFMLSDSPG--------------VMCRPSRVRQMFASRACRKSVMIGTALNTSEMK 584
Query: 783 KILEHL 788
K++ H+
Sbjct: 585 KLITHM 590
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 54/67 (80%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+PI+ VH+IC+GQV+ LS+AVKEL+ENS+DAGATSI++ LK+YG + +V DNGCG
Sbjct: 15 IKPIDGRSVHQICSGQVVLSLSTAVKELIENSVDAGATSIDLRLKDYGVDLIEVSDNGCG 74
Query: 72 ISPNNFK 78
+ NF+
Sbjct: 75 VEEENFE 81
>gi|17562796|ref|NP_505933.1| Protein PMS-2, isoform a [Caenorhabditis elegans]
gi|3878022|emb|CAA18355.1| Protein PMS-2, isoform a [Caenorhabditis elegans]
Length = 805
Score = 169 bits (428), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 87/210 (41%), Positives = 121/210 (57%), Gaps = 14/210 (6%)
Query: 601 ATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLN 660
A +L R K+DF +MK+IGQFN GFII +L LFIVDQHA+DEKYNFERL S L
Sbjct: 603 AERQLSRSLTKDDFSKMKIIGQFNHGFIICRLRGHLFIVDQHASDEKYNFERLQSSAKLT 662
Query: 661 QQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFG 720
+QPL P L +E++ ++ I NGF E + ++ L A P
Sbjct: 663 KQPLFMPTALGFGAVQELIIRENLPIFHANGFDFEFSEND-GCIKTFLTARPELLNQQLT 721
Query: 721 VEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNE 780
D++++++ ++ + Y+ P R+R + AS+ACR S+MIG L + E
Sbjct: 722 NSDLEEILAVVSQYPNQM-----YR--------PVRIRKIFASKACRKSVMIGKPLNQRE 768
Query: 781 MQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
M +I+ HLA L+ PWNCPHGRPT+RHL L
Sbjct: 769 MTQIIRHLAKLDQPWNCPHGRPTIRHLASL 798
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 95/190 (50%), Gaps = 25/190 (13%)
Query: 79 VRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGM-------N 131
V+ + Q++AL+ ++ +CTN +++ G++S++D + +FG+
Sbjct: 173 VKLLSTVQSFALLCPHIKILCTNNINGKKTNLICTPGGTTSIQDVVANLFGIARKIENSK 232
Query: 132 IYNCLEPVAICKSDS------------------CKVEGFLSKPGQGSGRNLGDRQYFFVN 173
I + L P+ + D K+ GF+S G GR DRQ+ ++N
Sbjct: 233 IGSGLIPIQQNQPDVEIMTIHSVPMEEMHFFDLFKIRGFVSSCEHGCGRGTSDRQFVYIN 292
Query: 174 DRPVDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILH 233
+RPV+ +V ++N++YK N +QYPI ++ VP DVNVTPDK+ V E +L
Sbjct: 293 NRPVEYSRVCSVINDVYKQFNKKQYPIIVLFIDVPPEKIDVNVTPDKKTVMLEKERHLLA 352
Query: 234 ALREGLQEIY 243
+R + + Y
Sbjct: 353 VVRASMMKTY 362
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 49/78 (62%), Gaps = 4/78 (5%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I I+K V R+ QV+ LSSA+++L++NS+DAG+T I+I +K G E +V DNG G
Sbjct: 6 IERISKEVAERLTTAQVVVSLSSAIRQLIDNSIDAGSTIIDIRVKNNGFESIEVQDNGSG 65
Query: 72 ISPNNFKVRAVFLCQAYA 89
I NF LC+ ++
Sbjct: 66 IEARNFDA----LCKPHS 79
>gi|313212747|emb|CBY36677.1| unnamed protein product [Oikopleura dioica]
Length = 664
Score = 169 bits (428), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 90/213 (42%), Positives = 133/213 (62%), Gaps = 23/213 (10%)
Query: 601 ATTELERLFRKEDFGRMKVIGQFNLGFII---GKLDQDLFIVDQHAADEKYNFERLSQST 657
A EL R F K+DF +++VIGQFN GFII G+L DLF++DQHA DEK+NFERL S
Sbjct: 463 AEDELTRKFSKKDFTKLQVIGQFNRGFIIVTVGQLKDDLFLIDQHACDEKFNFERL-MSK 521
Query: 658 VLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLE-EDPHALAGLRFRLKAVPFSKK 716
++ QPL+ ++ L P E+ + + + +K GF DP +R+ AVP K
Sbjct: 522 KIDSQPLVIGKRMTLNPGEDQILQDKVALFKKYGFDFNFSDPE----FSYRMTAVPRVGK 577
Query: 717 ITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDAL 776
T G EDV +++ + N+G+ + PS++R + A ACRSS+MIG+AL
Sbjct: 578 STLGEEDVHEMLFLI--NEGDFN------------PKPSKIRRINAMAACRSSVMIGEAL 623
Query: 777 GRNEMQKILEHLADLNSPWNCPHGRPTMRHLVD 809
+M+++L++++ ++ PWNCPHGRPTMRHLV+
Sbjct: 624 KTYQMERMLKNMSTMDQPWNCPHGRPTMRHLVN 656
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 94/191 (49%), Gaps = 30/191 (15%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNI------- 132
RA+ +YALIA R V T G+++K+ + +T+ SLK I +V G I
Sbjct: 38 RALATMMSYALIANA-RIVVTTKNGRSMKTEI-QTRAGDSLKGKIASVLGGQISKGLVEI 95
Query: 133 --------------YNCLEPVA------ICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFV 172
+N P + K+ K GF+SK G GR DRQ+FFV
Sbjct: 96 DDIFDAGATEVESFWNLSVPTEEVIEDHLQKARIFKFNGFISKTDSG-GRTSPDRQFFFV 154
Query: 173 NDRPVDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSIL 232
N RP+D P +S+++N+ ++ S++YP+ ++N V A D+N+ PDKR V ++
Sbjct: 155 NGRPIDAPFLSRIINQEWRKVTSKKYPVVVLNIEVDQSAVDINLAPDKRTVLLQNQKHCQ 214
Query: 233 HALREGLQEIY 243
R LQ I+
Sbjct: 215 FRFRILLQNIW 225
>gi|242065624|ref|XP_002454101.1| hypothetical protein SORBIDRAFT_04g024565 [Sorghum bicolor]
gi|241933932|gb|EES07077.1| hypothetical protein SORBIDRAFT_04g024565 [Sorghum bicolor]
Length = 102
Score = 167 bits (422), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 77/100 (77%), Positives = 87/100 (87%)
Query: 715 KKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGD 774
K ITFGV+DVK+LIS LAD+QG+CSIISSYK+DT DSVCPSRVRAMLASRACR S MIGD
Sbjct: 1 KNITFGVQDVKELISMLADSQGDCSIISSYKLDTTDSVCPSRVRAMLASRACRMSTMIGD 60
Query: 775 ALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIR 814
L + EM+KIL++L L SPWNCPHGRPTMRHL DL TI+
Sbjct: 61 PLTKAEMKKILKNLTGLRSPWNCPHGRPTMRHLADLRTIK 100
>gi|341892768|gb|EGT48703.1| hypothetical protein CAEBREN_10667 [Caenorhabditis brenneri]
Length = 247
Score = 166 bits (419), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 94/215 (43%), Positives = 127/215 (59%), Gaps = 24/215 (11%)
Query: 601 ATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLN 660
A +L R KEDF MKVIGQFN GFII +L LFIVDQHA+DEKYNFERL + L
Sbjct: 45 AEKQLSRSLTKEDFNSMKVIGQFNNGFIICRLRGHLFIVDQHASDEKYNFERLQNTAKLT 104
Query: 661 QQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSL---EEDPHALAGLRFRLKAVP--FSK 715
+QPL P L +E+V ++ I + NGF E+D L+ L A P S+
Sbjct: 105 KQPLFTPAALGFGSVQELVIRDNLPIFQANGFDFDFREKD----GCLKTFLTARPELLSQ 160
Query: 716 KITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDA 775
++T D+++++S ++D + Y+ P R+R + AS+ACR S+MIG
Sbjct: 161 QLT--NSDLEEILSVVSDYPNQM-----YR--------PVRIRNIFASKACRKSVMIGKP 205
Query: 776 LGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
L + EM +I+ HL+ L PWNCPHGRPT+RHL L
Sbjct: 206 LNQREMTRIIRHLSKLEQPWNCPHGRPTIRHLASL 240
>gi|339250250|ref|XP_003374110.1| mismatch repair endonuclease PMS2 [Trichinella spiralis]
gi|316969662|gb|EFV53722.1| mismatch repair endonuclease PMS2 [Trichinella spiralis]
Length = 765
Score = 166 bits (419), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 85/218 (38%), Positives = 132/218 (60%), Gaps = 17/218 (7%)
Query: 599 AAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTV 658
A A E++R ++ F M VIGQFN GFI+ +LD DLFI+DQHA+DEK FE + +STV
Sbjct: 562 AQAEEEVKRFLTRDMFAEMHVIGQFNCGFILTRLDDDLFILDQHASDEKRTFETMRRSTV 621
Query: 659 LNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKIT 718
+ Q L+ P+ +LTP + V +++ + G++ + P + ++ ++P
Sbjct: 622 VQSQLLVHPICSNLTPFDRHVILENLETFKNLGYTFQFPPEG-SDEPVKIVSLPVCHGQI 680
Query: 719 FGVEDVKDLISTLADNQGECS--IISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDA 775
F D +G+ + I++S ++C P+++R++LASRACR S+MIG A
Sbjct: 681 F-------------DQRGDTTDNILTSNSSFRVGNLCMPTKIRSILASRACRKSVMIGTA 727
Query: 776 LGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTI 813
L EMQ+I+E L+ + PWNCPHGRPT+RHL++L T
Sbjct: 728 LSMEEMQQIVERLSSIEHPWNCPHGRPTVRHLINLATF 765
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 94/186 (50%), Gaps = 27/186 (14%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCL--- 136
+ + + Q+YAL+ +R N +SV S +L++NI +VF + L
Sbjct: 93 KLMHMLQSYALLPSALRLQVVNKQKGGKQSVAFSALSSENLRENICSVFDVGQLRLLMEF 152
Query: 137 ------------------EPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVD 178
+P I D K+ GF+S QG R+ GDRQ+ +VN+RP +
Sbjct: 153 VQTVPNEETLEQYLVKNFDPAEI---DKIKIVGFVSSVQQG--RSSGDRQFTYVNNRPCE 207
Query: 179 LPKVSKLVNELYKGANSRQYPIAIMNFIVPT-RACDVNVTPDKRKVFFSDECSILHALRE 237
+ K+++LVNE+Y N QYP+ ++ VPT DVN TPDKR V+ S E +L LR
Sbjct: 208 IRKITQLVNEVYHQFNPVQYPVFVLYINVPTAEMLDVNCTPDKRLVYISRENLLLAILRH 267
Query: 238 GLQEIY 243
L E+Y
Sbjct: 268 SLTEMY 273
>gi|449300554|gb|EMC96566.1| hypothetical protein BAUCODRAFT_33929 [Baudoinia compniacensis UAMH
10762]
Length = 1130
Score = 165 bits (418), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 97/224 (43%), Positives = 131/224 (58%), Gaps = 22/224 (9%)
Query: 599 AAATTELERLFRKEDFGRMKVIGQFNLGFIIG------KLDQD-LFIVDQHAADEKYNFE 651
A+A +L K DF RM V+GQFNLGFI+ + +QD LFI+DQHAADEKYN+E
Sbjct: 879 ASAEGKLSLTVSKPDFERMMVVGQFNLGFIVAVRSAQDEEEQDELFIIDQHAADEKYNYE 938
Query: 652 RLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLE-----EDPHALAGLRF 706
RL ++ L Q L+RP L+LT EE + H ++ NGF +E +D
Sbjct: 939 RLQRTVTLQSQRLVRPKLLELTAIEEEIILNHSAALKSNGFEIEVSSSTDDDDESTNRHC 998
Query: 707 RLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRAC 766
RL +P S + TF V D+++L+ L++ S I + P +V+ MLA RAC
Sbjct: 999 RLLTLPISGEKTFDVSDLEELLHLLSEAPPGSSEI----------LRPKKVQRMLAMRAC 1048
Query: 767 RSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
RSSIMIG L +M K++ H+ ++ PWNCPHGRPTMRHL L
Sbjct: 1049 RSSIMIGKTLMHRQMVKVVRHMGEMEKPWNCPHGRPTMRHLASL 1092
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 100/188 (53%), Gaps = 25/188 (13%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFG---------M 130
+ V AYA I+ GVRF +N K K V T+ +++ K+NI+ VFG +
Sbjct: 173 KVVAYLHAYACISVGVRFSVSNQMPKGKKVAVFSTKSNTTTKENIVNVFGTKTLVALIKL 232
Query: 131 NIYNCLEP---------------VAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDR 175
++ +EP A C S + V+G +SKP G GR DRQ FFVN R
Sbjct: 233 DLQLEMEPSVGPGTQSARNWTTQAANC-STTVLVQGHISKPVFGEGRQAPDRQMFFVNSR 291
Query: 176 PVDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHAL 235
P LP+VSK +NE+YK N Q P N IV T + DVNV+PDKR + ++ ++L +L
Sbjct: 292 PCLLPQVSKAINEVYKSYNVSQSPFIFANLIVDTNSYDVNVSPDKRTIMLHNQTALLESL 351
Query: 236 REGLQEIY 243
+ L E++
Sbjct: 352 KTALTELF 359
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 53/72 (73%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
TI+ I +H+I +GQVI DL S VKELVENSLDAGA+SI++ K++G E +V DNG
Sbjct: 3 TIKAIESRSIHQIQSGQVIVDLCSVVKELVENSLDAGASSIDVGFKDHGLETIEVQDNGK 62
Query: 71 GISPNNFKVRAV 82
GI+P++F A+
Sbjct: 63 GIAPHDFDTVAL 74
>gi|361131241|gb|EHL02939.1| putative DNA mismatch repair protein PMS1 [Glarea lozoyensis 74030]
Length = 1023
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/222 (40%), Positives = 127/222 (57%), Gaps = 24/222 (10%)
Query: 601 ATTELERLFRKEDFGRMKVIGQFNLGFIIGK------------LDQDLFIVDQHAADEKY 648
A +L K DF +M+++GQFNLGFI+ L DLFI+DQHA+DEKY
Sbjct: 751 AEEKLSLTISKPDFAKMRIVGQFNLGFILATRTSITQPSEGQALADDLFIIDQHASDEKY 810
Query: 649 NFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRL 708
NFERL +T++ Q L+ P L LT EE + + + +NGF++ + G R L
Sbjct: 811 NFERLQSTTIVQSQRLVHPKLLSLTALEEEIVLENQKALSQNGFNISFNDTLPVGTRCSL 870
Query: 709 KAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRS 768
++P S++ FG+ED+ +L++ L + PS+VR M A RACRS
Sbjct: 871 ISLPLSRETVFGLEDLDELLALLTE------------YPNGSIPRPSKVRKMFAMRACRS 918
Query: 769 SIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
SIMIG +L +M ++ H+ +++ PWNCPHGRPTMRHL L
Sbjct: 919 SIMIGKSLSGKQMGNVVRHMGEIDKPWNCPHGRPTMRHLCGL 960
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 115/253 (45%), Gaps = 50/253 (19%)
Query: 53 IALKEYGEEWFQVVDNGCGISPNNFKVRAV--------------------FLCQA----- 87
+ K G E +V DNG GISP N++ A+ F +A
Sbjct: 11 VRFKNQGLESIEVQDNGDGISPQNYETLALKHHTSKLATYSDLTTLQTFGFRGEALSSLV 70
Query: 88 ------YALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAI 141
YA I GV+F + GK K+ + T+G+ + ++NI+ VFG L P+ +
Sbjct: 71 IGVLGQYACIQTGVKFSVSQQAGKGKKTSLFSTKGNKTTRENIVNVFGAKTLTALVPMDL 130
Query: 142 ---------------CKSDS----CKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKV 182
+ D ++ G +S+P G GR DRQ FFVN RP LP+V
Sbjct: 131 KLKLEPTSGPSQRWSTQEDGGQKDIRIVGHISRPASGEGRTTPDRQMFFVNARPCGLPQV 190
Query: 183 SKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEI 242
+K NE+YK N Q P N + T DVNV+PDKR + D+ +L L+E L +
Sbjct: 191 AKAFNEVYKAYNGSQSPFIFANIELDTHLYDVNVSPDKRTIMLHDQTRMLENLKEALVFL 250
Query: 243 YSPNNASYSVNKV 255
+ + + ++++
Sbjct: 251 FDSQDYTVPISQL 263
>gi|397645904|gb|EJK77034.1| hypothetical protein THAOC_01161 [Thalassiosira oceanica]
Length = 1120
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/246 (39%), Positives = 128/246 (52%), Gaps = 54/246 (21%)
Query: 611 KEDFGRMKVIGQFNLGFIIGKL-DQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLK 669
K+DF RM +IGQFNLGFI+ + + L+I+DQHAADEK+NFERL + TV+++Q L+ PL
Sbjct: 861 KDDFLRMSIIGQFNLGFILARCQNHHLWIIDQHAADEKWNFERLCRDTVIHEQTLIAPLP 920
Query: 670 LDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFS-------KKITFGVE 722
L+L+P EE +M++ +NGF + D R L A+P S K + FG +
Sbjct: 921 LELSPSEEHTILENMEVFERNGFRFKFDEAKEPRHRLSLTALPHSGSGGDGKKAVQFGKD 980
Query: 723 DVKDLISTLADNQGECSIISSYKMDTADS------------------------------- 751
DV L CS++ + M+T+D
Sbjct: 981 DVGAL----------CSLLGADGMNTSDGYSNGFGGDGSRIAGVNAVRRFAGMESFSENV 1030
Query: 752 VCPSRVR-----AMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRH 806
V S R AM A+RACR SIMIG AL E IL+ L PWNC HGRPT+ H
Sbjct: 1031 VSQSITRLPKAIAMFANRACRGSIMIGTALSDKEQHGILQKLDQTEIPWNCAHGRPTLSH 1090
Query: 807 LVDLTT 812
+ DLTT
Sbjct: 1091 IRDLTT 1096
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 98/208 (47%), Gaps = 38/208 (18%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKS------VVLKTQGSS-SLKDNIITVFGMNIYNCL 136
+ Q YA++ +F T+ + V L T SS +L+ +V G L
Sbjct: 252 MLQGYAILCLSTQFNLTDVATSSSAKKKSKTEVKLATSESSKTLEARTASVLGPKFLAGL 311
Query: 137 EPVAIC----------KSD---SCKVEGFLS----KPGQGSGRNLGDRQYFFVNDRPVDL 179
V + KSD K+ G +S P S R+L Q+F +N RPVDL
Sbjct: 312 ARVEVVLDSAVNDTHGKSDDETKWKMTGLISHAPTSPRPASARDL---QFFSINGRPVDL 368
Query: 180 PKVSKLVNELYK----------GANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDEC 229
P VS+++ ++++ R+ P ++ F +P DVN++PDKR+V F++E
Sbjct: 369 PSVSRVLGDVWRIFEPVAEVKGSGGGRRRPACVLAFTLPPSMYDVNLSPDKREVMFTNEA 428
Query: 230 SILHALREGLQEIY-SPNNASYSVNKVE 256
+I ++EGL+ ++ ++ + N+VE
Sbjct: 429 TISALIKEGLKALWLEQSDGQFKTNEVE 456
Score = 47.0 bits (110), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 41/97 (42%), Gaps = 34/97 (35%)
Query: 10 PTIRPINKGVVHRICAGQVIKDLSSA---------------------------------- 35
P I+ I V RI AG + DL+SA
Sbjct: 11 PLIKQIAPSSVQRIVAGAAVTDLASAGGLNAASLARRLGHLPALSLLVACTAVDELTAYL 70
Query: 36 VKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGI 72
VKEL++NS+DAGA + I L G + +VVDNG G+
Sbjct: 71 VKELIDNSIDAGAKRVSIKLFNQGIDSIEVVDNGSGV 107
>gi|406605428|emb|CCH43072.1| DNA mismatch repair protein [Wickerhamomyces ciferrii]
Length = 925
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/189 (42%), Positives = 112/189 (59%), Gaps = 15/189 (7%)
Query: 611 KEDFGRMKVIGQFNLGFII----GKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLR 666
K+DF MK+IGQFNLGFI+ L QDLFIVDQHA+DEK+NFE L + T+ + QPL+
Sbjct: 733 KKDFLEMKIIGQFNLGFILVIRQNDLKQDLFIVDQHASDEKFNFETLQKITIFDSQPLVV 792
Query: 667 PLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKD 726
P K++L +E+ + + KNGF E D G R +L ++P SKK F D +
Sbjct: 793 PKKIELNALDELTIIENQQVFVKNGFKFEIDEDGEPGSRIKLISLPLSKKTVFDENDFNE 852
Query: 727 LISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILE 786
LI + +NQG DS+ S++R+M A RACR SIM+G +L M K++
Sbjct: 853 LIHLIKENQG-----------NTDSIRCSKIRSMFAMRACRKSIMVGKSLNTKTMTKVIR 901
Query: 787 HLADLNSPW 795
+L L+ PW
Sbjct: 902 NLGQLDKPW 910
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 104/187 (55%), Gaps = 16/187 (8%)
Query: 87 AYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAIC---- 142
+YALI+ ++ + N T K++VL+TQG+S LK+NII VFG N L P+
Sbjct: 178 SYALISLNLKIIVANITINGKKNIVLQTQGNSILKNNIINVFGSNGMYGLIPLDFNLDLN 237
Query: 143 --KSD----------SCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELY 190
KS + K+ GF+SK G GR+ DRQYFF+N+RPV L K +NE+Y
Sbjct: 238 SNKSKLKILNHSIDYNIKINGFISKCSFGFGRSSIDRQYFFINNRPVSLTHFGKAINEVY 297
Query: 191 KGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASY 250
K N QYP+ I+NF + + D+NVTPDK+ + +E IL L++ L Y+ + S
Sbjct: 298 KSFNHLQYPVFILNFEINPQFLDLNVTPDKKIILIHNEDIILEKLKQELINFYNLQDLSL 357
Query: 251 SVNKVEQ 257
N Q
Sbjct: 358 VRNSTNQ 364
Score = 71.6 bits (174), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 46/66 (69%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I I K VHRI +GQVI DLS+AVKEL+ENS+DA + IEI K YG + +++D+G G
Sbjct: 4 ITSIGKEDVHRITSGQVIIDLSTAVKELLENSIDANSKKIEIIFKNYGLDSIEIIDDGDG 63
Query: 72 ISPNNF 77
I +F
Sbjct: 64 IDELDF 69
>gi|195172650|ref|XP_002027109.1| GL20045 [Drosophila persimilis]
gi|194112922|gb|EDW34965.1| GL20045 [Drosophila persimilis]
Length = 290
Score = 160 bits (406), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 86/182 (47%), Positives = 110/182 (60%), Gaps = 15/182 (8%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEE 676
M +IGQFNLGFII KL DLFIVDQHA+DEKYNFE L +ST L Q L P LDLT
Sbjct: 1 MDIIGQFNLGFIIVKLQDDLFIVDQHASDEKYNFETLQRSTQLEYQRLTVPQSLDLTAVN 60
Query: 677 EVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQG 736
E+V H+ + KNGF E + A A + RL P+S++ FG ED+ +LI L D
Sbjct: 61 EMVLIDHLPVFEKNGFKFEINHEAPATKKVRLLGKPYSRQWEFGKEDIDELIFMLQDA-- 118
Query: 737 ECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGR-NEMQKILEHLADLNSP 794
++C PSRVR+M ASRACR S+MIG AL R M++++ + ++ P
Sbjct: 119 -----------PEGTICRPSRVRSMFASRACRKSVMIGTALNRTTTMRRLITQMGEIEQP 167
Query: 795 WN 796
WN
Sbjct: 168 WN 169
>gi|440300566|gb|ELP93013.1| DNA mismatch repair protein mutL, putative [Entamoeba invadens IP1]
Length = 891
Score = 159 bits (403), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 84/208 (40%), Positives = 124/208 (59%), Gaps = 19/208 (9%)
Query: 606 ERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLL 665
+R +K D +++VIGQFN GFIIGK +DL+I+DQHAADE +NFE L ++ L Q L+
Sbjct: 689 QRTLQKMDLAQIEVIGQFNKGFIIGKKGEDLYIIDQHAADEIFNFETLLKNDKLEVQSLI 748
Query: 666 RPLKLDLTPEEEVVASMHMDIIRKNGFSL---EEDPHALAGLRFRLKAVPFSKKITFGVE 722
P+K+ L+ ++E+ ++ I GF + EE+P A R L V KK+ FG +
Sbjct: 749 APIKVQLSSDDELYVEENIGIFPHFGFEVLYKEENP---ATERVLLSKVYSRKKVCFGAK 805
Query: 723 DVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQ 782
+ +LI+ L Q E ++ R + A+ ACR SIM+ D L R++M+
Sbjct: 806 EFLELITQLRQCQDESGMV-------------KRKHKIFATEACRMSIMVSDTLTRDQMR 852
Query: 783 KILEHLADLNSPWNCPHGRPTMRHLVDL 810
+IL +L LN PW+CPHGR T+RHL D+
Sbjct: 853 RILLNLTTLNKPWHCPHGRQTVRHLFDI 880
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 93/175 (53%), Gaps = 9/175 (5%)
Query: 73 SPNNFKVRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNI 132
S N + V L Q+YAL+ ++ V TN T KS VL S+K+N+ T+F +
Sbjct: 160 SKNKDMAKVVTLLQSYALLLTNIKIVLTNKTSN--KSAVLLQSNGKSMKENLYTMFSGDA 217
Query: 133 YNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYK- 191
+ P+ D + G S GR GDR +FFVN R ++ K+ ++V ++
Sbjct: 218 KDVSIPLDY-HEDGVGIVGMAS-TFTDKGRTTGDRMFFFVNRRLIEHKKMQQIVTNQWRS 275
Query: 192 -GAN-SRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYS 244
GAN R++P IM+ +V D NVTP+K+ V F +E +L A+++ ++++S
Sbjct: 276 LGANFKRKFPTVIMSIVVD--EYDPNVTPNKKSVIFCNEEVVLSAVKKCFEKVWS 328
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 43/67 (64%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
TI I+ + ++ AGQV+ DL VKEL EN++D+GATSI + L G + V DNGC
Sbjct: 3 TIHLIDSETIKKLSAGQVVVDLECVVKELFENAMDSGATSIFVRLLNCGLDEITVEDNGC 62
Query: 71 GISPNNF 77
GI PN+
Sbjct: 63 GIPPNSI 69
>gi|405123184|gb|AFR97949.1| ATPase [Cryptococcus neoformans var. grubii H99]
Length = 979
Score = 159 bits (403), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 90/218 (41%), Positives = 123/218 (56%), Gaps = 32/218 (14%)
Query: 601 ATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQ------DLFIVDQHAADEKYNFERLS 654
A L R+ K DF +M+V GQFN GFII +L DLFI+DQHA+DEKYNFE L
Sbjct: 763 AEEALSRVISKADFEKMEVKGQFNKGFIIARLQSVDDGTDDLFIIDQHASDEKYNFETLQ 822
Query: 655 QSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFS--LEEDPHALAGLRFRLKAVP 712
Q+T + Q L++P L LT +E++A ++DI+ NGF ++E+ A G R L ++P
Sbjct: 823 QTTKIKAQALIKPRALHLTAGDEIIAMENIDILNANGFDVHVDENKPAGKGERISLLSMP 882
Query: 713 FSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMI 772
SK+ F ++ L+ L+D+ + V P + RAM ASRACR S+MI
Sbjct: 883 VSKETVFDFKE--QLLQLLSDD----------SRPSGQMVRPMKARAMFASRACRKSVMI 930
Query: 773 GDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
G L + +M + NCPHGRPTMRHL L
Sbjct: 931 GKTLTKGQMSQ------------NCPHGRPTMRHLTKL 956
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 109/210 (51%), Gaps = 29/210 (13%)
Query: 80 RAVFLCQAYALIA---------KGVRFVCTNTTGKN---VKSVVLKTQGSSSLKDNIITV 127
RA+ L AYAL+ GVR T G +++ L T G L+ ++ V
Sbjct: 147 RALVLLTAYALVPASASVQDARNGVRLKVELTAGGGRAAKRNIHLMTDGRGQLRSSVGAV 206
Query: 128 FGMNIYNCLEPVAIC-----------------KSDSCKVEGFLSKPGQGSGRNLGDRQYF 170
+G + + +E + + ++ + KV+G +S G G + RQ+F
Sbjct: 207 WGPSALDNVEDIDLSLEVEIDRLMARREGITERTQTVKVKGLISSAQWGCGFSTSSRQFF 266
Query: 171 FVNDRPVDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECS 230
++N RP +L KV++ +NE+YK N+ Q P+AI++F +P + D+NV+PDKR +F E
Sbjct: 267 YINGRPCNLTKVARAINEVYKSFNTSQLPLAILDFKIPNESVDINVSPDKRTIFVHSEDC 326
Query: 231 ILHALREGLQEIYSPNNASYSVNKVEQLIE 260
++ +L+ L+ ++P+ +++V + I+
Sbjct: 327 LIDSLKTALESFFAPSRNTFTVEGASRTIK 356
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 38/47 (80%), Gaps = 2/47 (4%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEY 58
I+ I+ ++HRI +GQV+ DL SA+KEL+ENSLDAGAT+ IAL+ +
Sbjct: 5 IKAIDTSLIHRIHSGQVVLDLQSAIKELLENSLDAGATA--IALRHH 49
>gi|396082487|gb|AFN84096.1| DNA mismatch repair protein MutL [Encephalitozoon romaleae SJ-2008]
Length = 633
Score = 159 bits (403), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 83/200 (41%), Positives = 126/200 (63%), Gaps = 29/200 (14%)
Query: 609 FRKEDFGRMKVIGQFNLGFIIGKLDQD----LFIVDQHAADEKYNFERLSQSTVLNQQPL 664
F KEDF RM+VIGQFN GFII KL ++ L VDQHAADE NFE + ++ L +Q +
Sbjct: 451 FSKEDFTRMEVIGQFNNGFIISKLKKNDKIYLVAVDQHAADEIRNFESIKKTFRLKKQSV 510
Query: 665 LRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDV 724
+ P+KLDLTP EEV+ + ++++ +NGF ++ G+ L+ +P K FGV++
Sbjct: 511 IVPVKLDLTPIEEVIVNDNLELFERNGFVIKN------GM---LETIPVYKNQVFGVKEF 561
Query: 725 KDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKI 784
++L+ + +++ E R+R ++AS+ACR+S+MIGDAL +M+KI
Sbjct: 562 QELLEDMKNDEYEFK----------------RIRNIIASKACRTSVMIGDALSMADMKKI 605
Query: 785 LEHLADLNSPWNCPHGRPTM 804
++ L+ L+ PW CPHGRPT
Sbjct: 606 VKSLSFLDRPWKCPHGRPTF 625
Score = 42.7 bits (99), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR + + + RI A + ++ VKEL+ENS+D+G T I + + ++ V DNGCG
Sbjct: 2 IRKLPEDLGKRIKAQRSVQSTYIVVKELIENSIDSGCTWIRVRI----DDSVTVEDNGCG 57
Query: 72 ISPNN 76
IS N
Sbjct: 58 ISDLN 62
>gi|449018025|dbj|BAM81427.1| similar to postmeiotic segregation increased 2 [Cyanidioschyzon
merolae strain 10D]
Length = 830
Score = 159 bits (402), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 87/213 (40%), Positives = 117/213 (54%), Gaps = 11/213 (5%)
Query: 601 ATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLN 660
A ELE+ F K F M++IGQFN GFI+ DLFI+DQHAADEKY +E L+++
Sbjct: 622 ADRELEQRFHKHWFEEMRIIGQFNCGFILATYGSDLFIIDQHAADEKYIYESLARALRPR 681
Query: 661 QQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFG 720
Q +L+PL + + EE+ + + GF LE FR A P + G
Sbjct: 682 TQSMLQPLSIPASASEELTLWEQRENLAALGFELE----------FRWSAPPTERVWMLG 731
Query: 721 VEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNE 780
V + A + E + + AD + SRV+ +LA+RACR ++MIG L R
Sbjct: 732 APTVCQTVLE-ATDLLEIAHQAPLTGRVADLLRASRVKLLLATRACRRAVMIGMPLDRTH 790
Query: 781 MQKILEHLADLNSPWNCPHGRPTMRHLVDLTTI 813
MQ I+ LA L PWNCPHGRPTMRHLV ++ I
Sbjct: 791 MQSIVARLATLEQPWNCPHGRPTMRHLVRVSEI 823
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 86/179 (48%), Gaps = 14/179 (7%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNT-TGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP 138
+A+ + Q YAL A VRF T G+ ++ L TQG +L+ ++G L
Sbjct: 176 KAIQILQTYALAAPTVRFSVQWTPKGRERPTLCLATQGKCTLRSCFSLLYGAEQLTKLVD 235
Query: 139 VAI-----------CKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVN-DRPVDLPKVSKLV 186
+A+ C + G LS+ +GR+ DRQ + RPV ++ +++
Sbjct: 236 LAVIVKWPTPLPGACTEPELHMRGLLSRCYPAAGRSAPDRQMLLLQAKRPVQWTRMRRML 295
Query: 187 N-ELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYS 244
+ E + + YP+ ++ +P DVN +PDK +V D+ +++ ++RE L+ ++
Sbjct: 296 DSEFRQRTCTSLYPVYVLAIDLPPDTFDVNASPDKTEVLIHDDAAVVASVREALRTSWT 354
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 39/60 (65%)
Query: 19 VVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFK 78
VV + + V+ L+S KELVEN+LDA AT I + L YG E+ +V D+GCGI+ + +
Sbjct: 9 VVRHLTSAPVVTSLASVTKELVENALDAEATQISVFLSGYGLEFIEVSDDGCGIAKQDLE 68
>gi|19074926|ref|NP_586432.1| DNA MISMATCH REPAIR PROTEIN OF THE MUTL/HEXB FAMILY
[Encephalitozoon cuniculi GB-M1]
gi|19069651|emb|CAD26036.1| DNA MISMATCH REPAIR PROTEIN OF THE MUTL/HEXB FAMILY
[Encephalitozoon cuniculi GB-M1]
Length = 630
Score = 159 bits (401), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 82/203 (40%), Positives = 126/203 (62%), Gaps = 29/203 (14%)
Query: 609 FRKEDFGRMKVIGQFNLGFIIGKLDQD----LFIVDQHAADEKYNFERLSQSTVLNQQPL 664
F K DFGR+++IGQFN GFII KL+++ L VDQHAADE NFE + ++ L +Q +
Sbjct: 448 FSKGDFGRLEIIGQFNNGFIITKLEKNKKTYLVAVDQHAADEIRNFEDIKKTFCLKKQSV 507
Query: 665 LRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDV 724
+ P+KLDLTP EE+V S ++++ +NGF +++ G+ L+ VP K TFG+ +
Sbjct: 508 ISPVKLDLTPIEEMVVSDNVELFERNGFVVKD------GM---LETVPVYKNQTFGIREF 558
Query: 725 KDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKI 784
++L+ + + + E + R+++AS+ACR+S+MIGD L +M++I
Sbjct: 559 RELLEDVKNEEYEFR----------------KARSIIASKACRTSVMIGDVLSMADMKRI 602
Query: 785 LEHLADLNSPWNCPHGRPTMRHL 807
++ LA L PW CPHGRPT L
Sbjct: 603 VKSLASLERPWKCPHGRPTFMVL 625
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR + + V RI A + ++ + VKEL+EN++D+G T I I + ++ V DNGCG
Sbjct: 2 IRKLPEDVGKRIRAQRSVQSIYIVVKELIENAIDSGCTWIRILV----DDAITVEDNGCG 57
Query: 72 IS 73
IS
Sbjct: 58 IS 59
>gi|449328577|gb|AGE94854.1| DNA mismatch repair protein [Encephalitozoon cuniculi]
Length = 630
Score = 158 bits (400), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 82/203 (40%), Positives = 126/203 (62%), Gaps = 29/203 (14%)
Query: 609 FRKEDFGRMKVIGQFNLGFIIGKLDQD----LFIVDQHAADEKYNFERLSQSTVLNQQPL 664
F K DFGR+++IGQFN GFII KL+++ L VDQHAADE NFE + ++ L +Q +
Sbjct: 448 FSKGDFGRLEIIGQFNNGFIITKLEKNKKTYLVAVDQHAADEIRNFEDIKKTFCLKKQSV 507
Query: 665 LRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDV 724
+ P+KLDLTP EE+V S ++++ +NGF +++ G+ L+ VP K TFG+ +
Sbjct: 508 ISPVKLDLTPIEEMVVSDNVELFERNGFVVKD------GM---LETVPVYKNQTFGIREF 558
Query: 725 KDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKI 784
++L+ + + + E + R+++AS+ACR+S+MIGD L +M++I
Sbjct: 559 RELLEDVKNEEYEFR----------------KARSIIASKACRTSVMIGDVLSMADMKRI 602
Query: 785 LEHLADLNSPWNCPHGRPTMRHL 807
++ LA L PW CPHGRPT L
Sbjct: 603 VKSLASLERPWKCPHGRPTFMVL 625
Score = 45.1 bits (105), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 4/62 (6%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR + + V RI A + ++ + VKEL+EN++D+G T I I + ++ V DNGCG
Sbjct: 2 IRKLPEDVGKRIRAQRSVQSIYIVVKELIENAIDSGCTWIRILV----DDAITVEDNGCG 57
Query: 72 IS 73
IS
Sbjct: 58 IS 59
>gi|229594773|ref|XP_001030203.2| DNA mismatch repair protein, C-terminal domain containing protein
[Tetrahymena thermophila]
gi|117556977|gb|ABK35674.1| putative mismatch repair protein [Tetrahymena thermophila]
gi|225566596|gb|EAR82540.2| DNA mismatch repair protein, C-terminal domain containing protein
[Tetrahymena thermophila SB210]
Length = 946
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/220 (37%), Positives = 126/220 (57%), Gaps = 22/220 (10%)
Query: 609 FRKEDFGRMKVIGQFNLGFIIGKL---DQDLFIVDQHAADEKYNFERLSQSTVLNQQPLL 665
F+K+ F +++IGQFN FII DQ +F++DQHA+DEK N+ERL + Q L+
Sbjct: 738 FKKDKFVELQIIGQFNKAFIIAYWVEKDQ-IFLIDQHASDEKTNYERLLKENNFQGQKLV 796
Query: 666 RPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGL-RFRLKAVPFSKKITFGVEDV 724
+P++L LT +E + + +I +KNGF + G + +P SK I F + D
Sbjct: 797 KPIELSLTIQEADILENNREIFKKNGFQFQIKYDESNGEPNLYINQLPSSKHIQFNINDF 856
Query: 725 KDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKI 784
++ + N E I ++ P +++ +LAS+ACRSSIMIG AL ++ M++I
Sbjct: 857 DEIFQNI--NNEETDI---------ETFRPKKIQRILASKACRSSIMIGTALNKSSMKQI 905
Query: 785 LEHLADLNSPWNCPHGRPT------MRHLVDLTTIRKNID 818
L +L+ L SPWNCPHGRPT M HL+ ++K D
Sbjct: 906 LLNLSKLQSPWNCPHGRPTMVKTPPMNHLIQQVQVKKTYD 945
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 49/66 (74%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ +++ + IC QVI DL++ VKELVENSLDAG+T IE+ LKEYG+E +VVDNG G
Sbjct: 2 IKKLDQSSILNICVNQVIIDLATCVKELVENSLDAGSTKIEVYLKEYGKEGVEVVDNGSG 61
Query: 72 ISPNNF 77
IS N
Sbjct: 62 ISSQNL 67
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 87/178 (48%), Gaps = 10/178 (5%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGS--SSLKDNIITVFGMNIYNCLE 137
+ V + YA+I+ + N + K + ++L + GS ++ VF I + L
Sbjct: 170 KLVNMITEYAIISVNCQICLINQSSKKGREMILNS-GSPMKNMLQKTAQVFSKKISDMLV 228
Query: 138 PVAICKSDSCKV-EGF-LSKPGQGSGRNLGDRQ----YFFVNDRPVD-LPKVSKLVNELY 190
+ + C V EG+ L++ GS ++ Q Y FVN RPV+ K++ + +++Y
Sbjct: 229 DLKFDFGEECSVIEGYILNRQTSGSVQDSKSIQKNMSYLFVNTRPVNPFKKMNSIFSDIY 288
Query: 191 KGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNA 248
K NS I I++ V A D NV+PDKR +F E ALR+ L +++ N+
Sbjct: 289 KKYNSSARYIYILHLKVKKDAIDFNVSPDKRDIFIKYENEFYTALRDNLTQLFEKLNS 346
>gi|344229018|gb|EGV60904.1| DNA mismatch repair protein MutL [Candida tenuis ATCC 10573]
Length = 624
Score = 157 bits (396), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 87/218 (39%), Positives = 124/218 (56%), Gaps = 31/218 (14%)
Query: 606 ERLFRKE------DFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVL 659
ERL KE F +M++IGQFNLGFI+ +L +LFIVDQHA+DEKYN+E L +
Sbjct: 426 ERLVEKEISVSKLQFNQMQLIGQFNLGFILTRLQDNLFIVDQHASDEKYNYEDLKNKFRV 485
Query: 660 NQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITF 719
Q L+ P+ L+L E S ++++ NGF + +D ++ +P K I F
Sbjct: 486 QSQQLITPIPLNLNLVEIQKLSEFINLVENNGFKVNDDN--------QITHLPTYKNIQF 537
Query: 720 GVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRN 779
ED+ +L+S L C + P ++ ++LA +ACR S MIG L +
Sbjct: 538 DKEDLVELLSQLP-----CH-----------PILP-KINSVLAMKACRKSTMIGQHLNVH 580
Query: 780 EMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKNI 817
M+KIL HL++L+ PWNCPHGRPT+RHL DL I +
Sbjct: 581 TMKKILSHLSELDKPWNCPHGRPTLRHLHDLGGINNKV 618
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 141/294 (47%), Gaps = 33/294 (11%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTT-GKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP 138
+ + Y +I ++FV TN+ GK K V++ TQ + SL +N I ++G L+P
Sbjct: 174 KMISFLYNYIIINPQIKFVVTNSVAGK--KKVLISTQRTGSLLNNFIIIYGTKSVESLKP 231
Query: 139 VAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQY 198
+ I + + KV G++S G GR++ D+Q+ ++N+RP+ ++ KL+NE+Y N+ Q+
Sbjct: 232 IDIEVNSNFKVSGYISSLSIGKGRSIKDKQHLYLNNRPIIHSEMMKLINEVYNQFNNLQF 291
Query: 199 PIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIY-SPNNASYSVNKVEQ 257
P+ I+N ++ + DVN+ PDK ++ FS + L+ R+ L + S N V K +
Sbjct: 292 PVFILNVLI-NDSIDVNLNPDKTRINFSQD---LNEFRQELVRFWESENMEQQLVLKPSK 347
Query: 258 LIEPEKSGPSSGAESC----MFLEQLSPDGNGCIEILNEQQISKGNTPKTVEVDTLHSDA 313
+P+ P S + L P +NE+ N TV + +
Sbjct: 348 DPKPQDHKPKPDIISTKRIPIELSAPKPKKPKFANYMNEEIFKTQNLKTTVNSHYIRLKS 407
Query: 314 LEGLVHSSNENGKGNFTLKAHDDKSA--DRLS---------KFNCMKLIGPHNV 356
+ KG +LK+ DD +RL +FN M+LIG N+
Sbjct: 408 ----------HKKGVVSLKSKDDTHPGDERLVEKEISVSKLQFNQMQLIGQFNL 451
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 44/64 (68%)
Query: 15 INKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISP 74
I K + RI +GQVI DL S VKELVENS+DA + IEIA KE+G E ++ DNG GI P
Sbjct: 5 IQKADIQRITSGQVIIDLLSIVKELVENSIDASSDLIEIAFKEHGLETIEINDNGHGIPP 64
Query: 75 NNFK 78
+ K
Sbjct: 65 EDHK 68
>gi|401828154|ref|XP_003888369.1| putative DNA mismatch repair enzyme [Encephalitozoon hellem ATCC
50504]
gi|392999641|gb|AFM99388.1| putative DNA mismatch repair enzyme [Encephalitozoon hellem ATCC
50504]
Length = 635
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 80/203 (39%), Positives = 128/203 (63%), Gaps = 29/203 (14%)
Query: 609 FRKEDFGRMKVIGQFNLGFIIGKLDQD----LFIVDQHAADEKYNFERLSQSTVLNQQPL 664
F K DF R++VIGQFN GFII KL+++ L VDQHAADE NFE + ++ + +Q +
Sbjct: 453 FSKGDFSRLEVIGQFNNGFIISKLEKNGSVYLVAVDQHAADEIKNFESIRKTFRMKKQSV 512
Query: 665 LRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDV 724
+ P+KLDLTP EE+V S ++++ +NGF ++ G+ L+A+P K FG+++
Sbjct: 513 IVPVKLDLTPIEEMVVSDNLELFERNGFVIKN------GM---LEAIPVYKNQVFGIKEF 563
Query: 725 KDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKI 784
++ + ++ +++ E ++R ++AS+ACR+S+MIGDAL +M++I
Sbjct: 564 REFLESVKNDEHEFK----------------KIRDIVASKACRTSVMIGDALSIADMKRI 607
Query: 785 LEHLADLNSPWNCPHGRPTMRHL 807
++ LA L+ PW CPHGRPT L
Sbjct: 608 VKGLASLDRPWKCPHGRPTFMVL 630
Score = 44.7 bits (104), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR + + V +I A + +++ VKEL+ENS+D+G T I I + ++ V DNGCG
Sbjct: 2 IRKLPEDVGRKIKAQRSVQNAYVVVKELIENSIDSGCTWIRIRI----DDAITVEDNGCG 57
Query: 72 ISPNN 76
IS N
Sbjct: 58 ISDLN 62
>gi|324502411|gb|ADY41063.1| Mismatch repair endonuclease PMS2 [Ascaris suum]
Length = 888
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/218 (40%), Positives = 118/218 (54%), Gaps = 26/218 (11%)
Query: 600 AATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVL 659
AA +L RKEDF M V+GQFN GFII +L DLFIVDQHA+DEKYNFERL + +
Sbjct: 679 AAEDDLGANVRKEDFAVMDVVGQFNKGFIITRLRGDLFIVDQHASDEKYNFERLQKEARI 738
Query: 660 NQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITF 719
Q L+ P L + EE +++I +NGF D + + R L +VP
Sbjct: 739 QSQLLINPRPLKIGAMEEAALRDNIEIFNQNGFEFRFDDNGESEGRALLTSVPVLNSCQL 798
Query: 720 GVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRN 779
G D+ +++S LAD G + Y+ P+++R + ASRACR S+MIG AL
Sbjct: 799 GTSDIDEMLSVLADFPG-----TMYR--------PTKLRKLFASRACRKSVMIGMALSTP 845
Query: 780 EMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKNI 817
+M+K NCPHGRPT R L L R N+
Sbjct: 846 QMEK------------NCPHGRPTFRRLCSLAA-RPNV 870
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 83/182 (45%), Gaps = 20/182 (10%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGM------------- 130
+ AL VRF ++ ++ GS+S+K+ ++++FG
Sbjct: 180 VVHTLALSRTDVRFCVSSILDGRQHQILSTPGGSASIKEVLVSLFGARSDKNAVLDIVQR 239
Query: 131 -------NIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVS 183
+IY + K+ G++S G GR+ DRQ+ + N RPV PK+
Sbjct: 240 APDNEVCSIYGVSAENSASTFAEIKLSGYVSSCVHGHGRSTADRQFIYFNKRPVQYPKLC 299
Query: 184 KLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIY 243
++ NE+Y+ N QY + ++ VP + DVNV PDKR VF+ E + +R L +
Sbjct: 300 RIANEVYQQYNQGQYCMLVLLVDVPPESIDVNVAPDKRSVFYEKERELFAVVRASLLATF 359
Query: 244 SP 245
P
Sbjct: 360 EP 361
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 54/78 (69%), Gaps = 4/78 (5%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I PI V RIC GQV+ L A KE+++N+LDAGAT+IE+ L+ +G E +V+DNGCG
Sbjct: 8 IAPIPADVCRRICTGQVVTTLGDACKEVIDNALDAGATTIEVRLRSFGSESMEVIDNGCG 67
Query: 72 ISPNNFKVRAVFLCQAYA 89
I ++F+ LC+A+A
Sbjct: 68 IHSSDFEA----LCKAHA 81
>gi|300122429|emb|CBK23000.2| unnamed protein product [Blastocystis hominis]
Length = 185
Score = 154 bits (390), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 78/195 (40%), Positives = 117/195 (60%), Gaps = 14/195 (7%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEE 676
M+VIGQFN FI+ +LD+DL+I+DQHA DEK N+E L ++ Q L++P+ L+L+P++
Sbjct: 1 MEVIGQFNNSFILCQLDKDLYILDQHACDEKSNYEHLMNEVAIHSQKLIKPIPLELSPDQ 60
Query: 677 EVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQG 736
E + I ++NGF + G R +L ++P SKK TF VED +L+ T+ + G
Sbjct: 61 EFTIIHNQAIFKRNGFDISISESQELGQRLQLTSLPASKKYTFSVEDFLELVGTVMETGG 120
Query: 737 ECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEM-QKILEHLADLNSPW 795
++ +LA+RAC S+ GD L +M +I+ LA+L+ PW
Sbjct: 121 MAQRT-------------PKLAKILATRACHQSVRAGDPLNYPKMVSQIVRRLAELDRPW 167
Query: 796 NCPHGRPTMRHLVDL 810
+CPHGRPT+RHLV L
Sbjct: 168 SCPHGRPTLRHLVSL 182
>gi|303391489|ref|XP_003073974.1| DNA mismatch repair protein MutL [Encephalitozoon intestinalis ATCC
50506]
gi|303303123|gb|ADM12614.1| DNA mismatch repair protein MutL [Encephalitozoon intestinalis ATCC
50506]
Length = 635
Score = 154 bits (388), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 76/200 (38%), Positives = 123/200 (61%), Gaps = 29/200 (14%)
Query: 609 FRKEDFGRMKVIGQFNLGFIIGKLDQD----LFIVDQHAADEKYNFERLSQSTVLNQQPL 664
F K DF R+++IGQFN GFII KL+++ L VDQHAADE NFE + ++ L +Q +
Sbjct: 453 FSKSDFNRLEIIGQFNNGFIIAKLEKNEKTYLIAVDQHAADEIRNFENIKKTFYLKKQSV 512
Query: 665 LRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDV 724
+ P+KLDLTP EE++ + + ++ KNGF ++ G+ L+ +P + FG+++
Sbjct: 513 IVPVKLDLTPIEEMIVNENSEVFEKNGFVVKN------GM---LETIPVYRNQVFGIKEF 563
Query: 725 KDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKI 784
++L+ + + + E ++R+++AS+ACR+S+MIGDAL +M++I
Sbjct: 564 RELLEDVKNEEYEFK----------------KIRSIIASKACRTSVMIGDALSAADMKRI 607
Query: 785 LEHLADLNSPWNCPHGRPTM 804
+ L L+ PW CPHGRPT
Sbjct: 608 VRSLGVLDRPWKCPHGRPTF 627
Score = 39.3 bits (90), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ + + + RI A + I + VKELVENS+D+ T I I + ++ V DNGCG
Sbjct: 2 IKRLPEDIGRRIKAQRSIPNTYIVVKELVENSIDSECTWIRIQV----DDSIVVEDNGCG 57
Query: 72 IS 73
IS
Sbjct: 58 IS 59
>gi|294932553|ref|XP_002780330.1| dna mismatch repair protein pms2, putative [Perkinsus marinus ATCC
50983]
gi|239890252|gb|EER12125.1| dna mismatch repair protein pms2, putative [Perkinsus marinus ATCC
50983]
Length = 483
Score = 153 bits (387), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 87/209 (41%), Positives = 118/209 (56%), Gaps = 16/209 (7%)
Query: 611 KEDFGRMKVIGQFNLGFIIGKLD-QDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLK 669
KEDF M+VIGQFN GFII L+ + LFI+DQHA DEK FE L++++ L QP++ P++
Sbjct: 272 KEDFEAMRVIGQFNKGFIITALEGRWLFILDQHACDEKTIFETLNKTSELKSQPMIVPVR 331
Query: 670 LDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIS 729
L L P E I GF D A G R +L ++ + + F E +
Sbjct: 332 LSLPPPLESCIRGSRREIEACGFRFNFDDDAPIGSRVQLTSLGVASGLGF--ERIPSASL 389
Query: 730 TLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLA 789
+ G C + P RV +MLASRACR++IMIGD+L R +M+ ++ +A
Sbjct: 390 FWSSALGHC-------------LRPPRVWSMLASRACRTAIMIGDSLSRKKMEGVVRKMA 436
Query: 790 DLNSPWNCPHGRPTMRHLVDLTTIRKNID 818
LN PWNCPHGRPTMR L L+ + ID
Sbjct: 437 ALNQPWNCPHGRPTMRLLATLSAHGRGID 465
Score = 66.6 bits (161), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 46/78 (58%), Gaps = 4/78 (5%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I + + VV ICA QV+ LS VKEL+ENSLDAGA +I + L G + V D+GCG
Sbjct: 13 ISSLTRDVVDSICAAQVVTSLSQCVKELLENSLDAGARNITVTLVNNGVDMIAVSDDGCG 72
Query: 72 ISPNNFKVRAVFLCQAYA 89
+S N+ LC +A
Sbjct: 73 VSEENWST----LCSWHA 86
>gi|297287878|ref|XP_002808391.1| PREDICTED: LOW QUALITY PROTEIN: mismatch repair endonuclease
PMS2-like, partial [Macaca mulatta]
Length = 539
Score = 151 bits (382), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 123/232 (53%), Gaps = 48/232 (20%)
Query: 591 EERKARALAAATTELERLFR-----KEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAAD 645
E + RA ++ LE L K F M++IGQFNLGFII KL++ L +
Sbjct: 350 EVTQQRAQGSSWQRLEGLISSIGKSKTMFAEMEIIGQFNLGFIITKLNEGLAL------- 402
Query: 646 EKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLR 705
P L+LT E V +++I RKNGF D +A R
Sbjct: 403 ---------------------PQTLNLTAVNEAVLIENLEIFRKNGFDFVIDENAPVTER 441
Query: 706 FRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVC-PSRVRAMLASR 764
+L ++P SK TFG +D+ +LI L+D+ G +C PSRV+ M ASR
Sbjct: 442 AKLISLPTSKNWTFGPQDIDELIFLLSDSPG--------------VMCRPSRVKQMFASR 487
Query: 765 ACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKN 816
ACR S+MIG AL +EM+K++ H+ +++ PWNCPHGRPTMRH+ +L I +N
Sbjct: 488 ACRKSVMIGTALNTSEMKKLITHMGEMDHPWNCPHGRPTMRHIANLGVISQN 539
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/64 (60%), Positives = 53/64 (82%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+PI++ VH+IC+GQV+ LS+AVKELVENSLDAGAT+I++ LK+YG + +V DNGCG
Sbjct: 58 IKPIDRKSVHQICSGQVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSDNGCG 117
Query: 72 ISPN 75
+ N
Sbjct: 118 VEEN 121
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 73/142 (51%), Gaps = 12/142 (8%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP- 138
+ V + QAY +I+ G+R CTN G+ + V+ T GS S+K+NI +VFG L P
Sbjct: 225 KMVQVLQAYCIISAGIRVSCTNQLGQGKRQPVVCTGGSPSIKENIGSVFGQKQVQSLIPF 284
Query: 139 VAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQY 198
V + SDS E LS + NL F+ ++ VS+LVNE+Y N QY
Sbjct: 285 VQVPPSDSVCEEYGLS--CSDALHNL-----FYCARISLEF-LVSRLVNEVYHMYNRHQY 336
Query: 199 PIAIMNFIVPTRACDVNVTPDK 220
P ++N V + DV VT +
Sbjct: 337 PFVVLNISVDS---DVEVTQQR 355
>gi|167377899|ref|XP_001734578.1| DNA mismatch repair protein pms2 [Entamoeba dispar SAW760]
gi|165903783|gb|EDR29212.1| DNA mismatch repair protein pms2, putative [Entamoeba dispar
SAW760]
Length = 891
Score = 151 bits (381), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 80/206 (38%), Positives = 119/206 (57%), Gaps = 16/206 (7%)
Query: 607 RLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLR 666
R +K +++IGQFN GFIIGKL DL+I+DQHAADE YN+E L + L+ Q L+
Sbjct: 688 RKMKKTTLEEIEIIGQFNKGFIIGKLGYDLYIIDQHAADEIYNYETLLKKDKLSVQTLIS 747
Query: 667 PLKLDLTPEEEVVASMHMDIIRKNGFSL--EEDPHALAGLRFRLKAVPFSKKITFGVEDV 724
PL++ ++ ++E+ ++++ + GF + ED R L V K FG+ +
Sbjct: 748 PLQVTMSCDDEIFVQENIELFTQFGFEVIFREDKEVTQ--RVFLTKVYHRGKNFFGINEF 805
Query: 725 KDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKI 784
+L+ L + + V + + A+ ACR SIMIGD+LGR EM+KI
Sbjct: 806 SELVQQLKGCRNDM------------KVIVKKKHKIFATEACRMSIMIGDSLGREEMKKI 853
Query: 785 LEHLADLNSPWNCPHGRPTMRHLVDL 810
++ L +LN PW+CPHGR T+RHL DL
Sbjct: 854 IKRLVELNKPWHCPHGRQTIRHLWDL 879
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 105/199 (52%), Gaps = 20/199 (10%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
+ + L Q YAL+ ++ + + K+ +++L++ G S LK+N+ +F ++ + P+
Sbjct: 167 KIITLIQNYALMLINIKIILIHQFKKS-NNILLQSNGKS-LKENLYNLFKIDAKDVTIPI 224
Query: 140 AICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGAN---SR 196
I + + K+ G +S GR DR + FVN RP++ K+ +++ + ++ R
Sbjct: 225 EI-EENGIKISGIVSN-FIDKGRTNNDRIFLFVNKRPIEHKKLQQIIIQQWRSLGISFKR 282
Query: 197 QYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSP----------- 245
+YP I+N +V D NV+PDKRKVFF +E ++L + + + ++S
Sbjct: 283 KYPTVILNILVD--EYDPNVSPDKRKVFFINEDNVLKLMEKCISSVWSTELLEQNIPTIN 340
Query: 246 NNASYSVNKVEQLIEPEKS 264
N+ SYS + + + P KS
Sbjct: 341 NDISYSTSSIIENTSPIKS 359
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 45/69 (65%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
TI +N+ ++ ++ +G V+ D S +KELVEN++D+GAT I I L YG + V DNG
Sbjct: 3 TIHIMNEEIIQKLSSGCVVIDCESVIKELVENAIDSGATIINIKLNNYGLDSIIVEDNGS 62
Query: 71 GISPNNFKV 79
GI+ N ++
Sbjct: 63 GINEENMEL 71
>gi|294909575|ref|XP_002777799.1| DNA mismatch repair protein PMS1, putative [Perkinsus marinus ATCC
50983]
gi|239885761|gb|EER09594.1| DNA mismatch repair protein PMS1, putative [Perkinsus marinus ATCC
50983]
Length = 925
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 90/217 (41%), Positives = 120/217 (55%), Gaps = 18/217 (8%)
Query: 611 KEDFGRMKVIGQFNLGFIIGKLD-QDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLK 669
KEDF M+VIGQFN GFII L+ + LFI+DQHA DEK FE L++++ L QP++ P++
Sbjct: 686 KEDFEAMRVIGQFNKGFIITALEGRWLFILDQHACDEKTIFETLNKTSELKSQPMIVPVR 745
Query: 670 LDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITF------GVED 723
L L P E I GF A G R +L ++ + + F ED
Sbjct: 746 LSLPPPLESCIRGSRREIEACGFRFNFADDAPIGSRVQLTSLGVASGLGFERSRPLTKED 805
Query: 724 VKDLISTLADNQG---------ECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGD 774
DL S L D S+ S + + P RV +MLASRACR++IMIGD
Sbjct: 806 FVDLASLLLDRGATGRSDDELPSASLFWSSAL--GHCLRPPRVWSMLASRACRTAIMIGD 863
Query: 775 ALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLT 811
+L R +M+ ++ +A LN PWNCPHGRPTMR L L+
Sbjct: 864 SLSRKKMEGVVRKMAALNQPWNCPHGRPTMRLLATLS 900
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 46/78 (58%), Gaps = 4/78 (5%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I + + VV ICA QV+ LS VKEL+ENSLDAGA +I + L G + V D+GCG
Sbjct: 13 ITSLTRDVVDSICAAQVVTSLSQCVKELLENSLDAGARNITVTLVNNGVDMIAVSDDGCG 72
Query: 72 ISPNNFKVRAVFLCQAYA 89
+S N+ LC +A
Sbjct: 73 VSEENWST----LCSWHA 86
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 84/183 (45%), Gaps = 13/183 (7%)
Query: 82 VFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAI 141
V L QAYA+I V F T G+++ + + ++++ + + + + V
Sbjct: 193 VGLMQAYAVIRHDVAFRLT-CDGRSLLATNPEDDMETAIR-KVCCISAAELASMTRLVLE 250
Query: 142 CKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLP-KVSKLVNELYK--------G 192
+ ++G LS P + Q+ +V RPVD+P +VS+ +N+LYK
Sbjct: 251 DEGGRWSLKGCLSPPTSVLRPGVVHAQWLYVGGRPVDMPTRVSRCINQLYKRFQTTVALE 310
Query: 193 ANSRQYPIAIMNFIVP--TRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASY 250
S + +A+++ + A DVN + DKR V E + + E ++E +S ++
Sbjct: 311 RKSGRTWLAVLSIVFGEGVDAADVNSSKDKRSVILDFETELCDKITEAVEEEWSSASSQT 370
Query: 251 SVN 253
+V
Sbjct: 371 AVQ 373
>gi|426355461|ref|XP_004045140.1| PREDICTED: mismatch repair endonuclease PMS2-like [Gorilla gorilla
gorilla]
Length = 193
Score = 150 bits (380), Expect = 2e-33, Method: Composition-based stats.
Identities = 86/213 (40%), Positives = 115/213 (53%), Gaps = 31/213 (14%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLT 673
F M++IGQFNLGFII KL++D+FIVDQHA DEKYNFE L Q TVL Q L+ P L+LT
Sbjct: 2 FAEMEIIGQFNLGFIITKLNEDIFIVDQHATDEKYNFEMLQQHTVLQGQRLIAPQTLNLT 61
Query: 674 PEEEVVASMHMDIIRKNGFSL---EEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIST 730
E V +++I RKNGF E DP L + P + T
Sbjct: 62 AVNEAVLIENLEIFRKNGFDFVIDENDPGGLCCVWHE----PLER--------------T 103
Query: 731 LADNQGECSIISSYKMDTADSVCPSRVRAMLASR-------ACRSSIMIGDALGRNEMQK 783
+CS +++ + P RA AC +MIG AL +EM+K
Sbjct: 104 DGKESRDCSCWRENRLEGVPWLRPLG-RAAAGGHVGSGWDGAC--CVMIGTALNTSEMKK 160
Query: 784 ILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKN 816
++ H+ +++ PWNCPHGRPTMRH+ +L I +N
Sbjct: 161 LITHMGEMDHPWNCPHGRPTMRHIANLGVISQN 193
>gi|429962799|gb|ELA42343.1| hypothetical protein VICG_00441 [Vittaforma corneae ATCC 50505]
Length = 703
Score = 150 bits (379), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 78/211 (36%), Positives = 120/211 (56%), Gaps = 29/211 (13%)
Query: 608 LFRKEDFGRMKVIGQFNLGFIIGKLDQD----LFIVDQHAADEKYNFERLSQSTVLNQQP 663
+F K DF M +IGQFN GFI+ L + L VDQHAADE YNFERL + L +Q
Sbjct: 513 VFDKSDFKEMHIIGQFNQGFILCILKKGNSTFLIAVDQHAADEIYNFERLKCTFKLKKQR 572
Query: 664 LLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVED 723
LL P++L+ +P + ++ H + NGF + E+ L + P + + F VED
Sbjct: 573 LLTPIQLEFSPIQRLLIEEHKQTLEDNGFVISEN---------LLLSFPVYQGVFFSVED 623
Query: 724 VKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQK 783
++ +++ + P + + ++AS+ACRSSIMIG +L EM++
Sbjct: 624 FYSILDSISKG----------------ILVPEKFKNIMASKACRSSIMIGTSLSMKEMRR 667
Query: 784 ILEHLADLNSPWNCPHGRPTMRHLVDLTTIR 814
IL++L+ L+ PWNCPHGRPT + L ++ +I+
Sbjct: 668 ILDNLSVLDLPWNCPHGRPTFKVLCEMKSIK 698
Score = 43.5 bits (101), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Query: 23 ICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGI 72
I + Q + D KEL+ENSLDAG++ I +A+ E V DNGCGI
Sbjct: 13 IKSQQYVHDSYIVAKELIENSLDAGSSRISVAITETS---ISVEDNGCGI 59
>gi|67469317|ref|XP_650637.1| DNA mismatch repair protein PMS1 [Entamoeba histolytica HM-1:IMSS]
gi|56467281|gb|EAL45250.1| DNA mismatch repair protein PMS1, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449707568|gb|EMD47211.1| DNA mismatch repair protein pms2, putative [Entamoeba histolytica
KU27]
Length = 876
Score = 150 bits (379), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 79/204 (38%), Positives = 114/204 (55%), Gaps = 12/204 (5%)
Query: 607 RLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLR 666
R +K +++IGQFN GFIIGKL DL+I+DQHAADE YN+E L + L+ Q L+
Sbjct: 673 RKMKKTTLEEIEIIGQFNKGFIIGKLGYDLYIIDQHAADEIYNYETLLKKDKLSVQTLIS 732
Query: 667 PLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKD 726
PL++ ++ ++E+ ++ + + GF + A R L V K FG + +
Sbjct: 733 PLQVSMSSDDEIFVQENIGLFPQFGFEVTFREDKEATQRVFLTKVYHRGKNFFGANEFSE 792
Query: 727 LISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILE 786
L+ L + + V + + A+ ACR SIMIGD+LGR EM+KI+
Sbjct: 793 LVQQLKGCRNDM------------KVIIKKKHKIFATEACRMSIMIGDSLGREEMKKIIS 840
Query: 787 HLADLNSPWNCPHGRPTMRHLVDL 810
L LN PW+CPHGR T+RHL DL
Sbjct: 841 RLVGLNKPWHCPHGRQTIRHLWDL 864
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 86/168 (51%), Gaps = 9/168 (5%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
+ + L Q YAL+ ++ + T+ K +++L SLK+N+ F + + P+
Sbjct: 167 KIITLIQNYALMLTDIKMILTHQFKKT--NIILLQSNGKSLKENLYNFFKGDAKDVTIPI 224
Query: 140 AICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGAN---SR 196
+ K+ G +S GR DR + FVN RP++ K+ +++ + ++ R
Sbjct: 225 EF-EEQGIKISGIVSN-FTDKGRTNSDRIFLFVNKRPIEHKKLQQIITQQWRSLGVSFKR 282
Query: 197 QYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYS 244
+YP I+N V D NV+PDKRKVFF DE +++ + + + ++S
Sbjct: 283 KYPTVILNISVA--EYDPNVSPDKRKVFFLDEDNVITLMEKCISSVWS 328
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 45/69 (65%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
TI +++ ++ ++ +G V+ D S +KEL+ENS+D+GAT I + L YG + V DNG
Sbjct: 3 TIHIMDEEIIQKLSSGCVVIDCESVIKELIENSIDSGATIINVKLNNYGLDSLIVEDNGS 62
Query: 71 GISPNNFKV 79
GI+ N ++
Sbjct: 63 GINEENMEL 71
>gi|146100947|ref|XP_001468986.1| mismatch repair protein [Leishmania infantum JPCM5]
gi|134073355|emb|CAM72081.1| mismatch repair protein [Leishmania infantum JPCM5]
Length = 840
Score = 145 bits (367), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 88/240 (36%), Positives = 126/240 (52%), Gaps = 20/240 (8%)
Query: 580 AATLELSQPENEERKARALAAATTE-LERLFRKEDFGRMKVIGQFNLGFIIGKL-DQDLF 637
A L +S +R L A T + L F K F M+VIGQFN GFII L + D+F
Sbjct: 613 AVALSVSAKMRSRSSSRTLGAQTADDLNHYFTKNSFKEMRVIGQFNHGFIIAVLPNGDVF 672
Query: 638 IVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEED 697
+VDQHA+DEKYN+ERL ++ QPL+ P+ + ++ E +A H ++++GF +
Sbjct: 673 VVDQHASDEKYNYERLVRAYEATPQPLVMPVSVAMSAHEVDLAVEHKLTLQQHGFKVSRG 732
Query: 698 PHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSR- 756
L + L +P+ DV +L+ L Y T P R
Sbjct: 733 SDDTKLLVYSLPVLPYD---VVSASDVMELVQQLV----------QYGTITK----PLRA 775
Query: 757 VRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKN 816
V +A++ACRSSIMIG L M+ ILE L+ L+ PWNCPHGRPT+R L + +++
Sbjct: 776 VWHSMATKACRSSIMIGTPLTVKRMKLILERLSQLDQPWNCPHGRPTLRLLCSIADLQRG 835
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 40/62 (64%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I ++ ++ AGQVI DL+S VKEL EN+LDA AT++ I L YG + V D+G G
Sbjct: 2 ITRLDGASARKLAAGQVITDLTSVVKELSENALDAKATTVTIRLINYGLDEIVVDDDGTG 61
Query: 72 IS 73
IS
Sbjct: 62 IS 63
Score = 46.2 bits (108), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
Query: 151 GFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGA--NSRQYPIAIMNFIVP 208
G +SK G GR G Q F ++ R VDLP++ K +N+ + N+ Q V
Sbjct: 287 GLVSKV-SGGGRLSGGHQVFALDGRLVDLPRLGKALNDAFIQCLPNASQRLHVAFFLQVK 345
Query: 209 TRAC---DVNVTPDKRKVFFSDECSILHALRE-GLQEIYS 244
T A DVN+TP+KRKV + E + L + LQE S
Sbjct: 346 TNASLQYDVNLTPNKRKVLLAQEERLADELYQCALQEFGS 385
>gi|398023179|ref|XP_003864751.1| mismatch repair protein PMS1, putative [Leishmania donovani]
gi|322502987|emb|CBZ38071.1| mismatch repair protein PMS1, putative [Leishmania donovani]
Length = 840
Score = 145 bits (365), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/240 (36%), Positives = 125/240 (52%), Gaps = 20/240 (8%)
Query: 580 AATLELSQPENEERKARALAAATTE-LERLFRKEDFGRMKVIGQFNLGFIIGKL-DQDLF 637
A L S +R L A T + L F K F M+VIGQFN GFII L + D+F
Sbjct: 613 AVALSASAKMRSRSSSRTLGAQTADDLNHYFTKNSFKEMRVIGQFNHGFIIAVLPNGDVF 672
Query: 638 IVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEED 697
+VDQHA+DEKYN+ERL ++ QPL+ P+ + ++ E +A H ++++GF +
Sbjct: 673 VVDQHASDEKYNYERLVRAYEATPQPLVMPVSVAMSAHEVDLAVEHKLTLQQHGFKVSRG 732
Query: 698 PHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSR- 756
L + L +P+ DV +L+ L Y T P R
Sbjct: 733 SDDTKLLVYSLPVLPYD---VVSASDVMELVQQLV----------QYGTITK----PLRA 775
Query: 757 VRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKN 816
V +A++ACRSSIMIG L M+ ILE L+ L+ PWNCPHGRPT+R L + +++
Sbjct: 776 VWHSMATKACRSSIMIGTPLTVKRMKLILERLSQLDQPWNCPHGRPTLRLLCSIADLQRG 835
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 40/62 (64%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I ++ ++ AGQVI DL+S VKEL EN+LDA AT++ I L YG + V D+G G
Sbjct: 2 ITRLDGASARKLAAGQVITDLTSVVKELSENALDAKATTVTIRLINYGLDEIVVDDDGTG 61
Query: 72 IS 73
IS
Sbjct: 62 IS 63
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 51/100 (51%), Gaps = 7/100 (7%)
Query: 151 GFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGA--NSRQYPIAIMNFIVP 208
G +SK G GR GD Q F ++ R VDLP++ K +N+ + N+ Q V
Sbjct: 287 GLVSKV-SGGGRLSGDHQVFALDGRLVDLPRLGKALNDAFIQCLPNASQRLHVAFFLQVK 345
Query: 209 TRAC---DVNVTPDKRKVFFSDECSILHALRE-GLQEIYS 244
T A DVN+TP+KRKV + E + L + LQE S
Sbjct: 346 TNASLQYDVNLTPNKRKVLLAQEERLADELYQCALQEFGS 385
>gi|385305328|gb|EIF49315.1| atp-binding protein required for mismatch repair in mitosis and
meiosis [Dekkera bruxellensis AWRI1499]
Length = 414
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/183 (39%), Positives = 101/183 (55%), Gaps = 9/183 (4%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
+A+ Q YAL++ GVR + + + KSVV T GS LK NI ++FG LE V
Sbjct: 172 KAIAFLQCYALVSTGVRMIVRHIDARGRKSVVFSTSGSKELKRNITSLFGSGGARGLEAV 231
Query: 140 AICKS---------DSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELY 190
S + GF+S G GR+ DRQ++++N RPV LP+ SK VNE+Y
Sbjct: 232 DFTXSVPXKFHQGVQEIRFSGFISNASFGQGRSSSDRQFWYINGRPVHLPRFSKAVNEMY 291
Query: 191 KGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASY 250
K N QYP+ ++ + + D+NVTPDKR V S+E IL +LRE L I+S N+
Sbjct: 292 KKFNHLQYPMIVLXLFMDQKFVDINVTPDKRTVMVSNEAKILESLREKLDXIFSANDVRI 351
Query: 251 SVN 253
VN
Sbjct: 352 PVN 354
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 47/67 (70%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I I++ VH+I +GQVI DL++AVKE+VEN LDA AT I+I K YG++ V DNG G
Sbjct: 3 ITRIDQTDVHQITSGQVIVDLTTAVKEVVENGLDAKATQIDITFKNYGKDSIVVTDNGSG 62
Query: 72 ISPNNFK 78
I +F+
Sbjct: 63 IEEQDFE 69
>gi|328769413|gb|EGF79457.1| hypothetical protein BATDEDRAFT_89533 [Batrachochytrium
dendrobatidis JAM81]
Length = 613
Score = 144 bits (362), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/244 (35%), Positives = 127/244 (52%), Gaps = 26/244 (10%)
Query: 573 KMRRCFAAA-TLELSQPENEERKARALAAATTELERLFRKEDFGRMKVIGQFNLGFIIGK 631
++RR F + TL P R R L + +K DF M V+GQFNLGFI+
Sbjct: 390 QLRRRFKSMKTLTKLYP----RSHRILLNSKLAEPTFIQKSDFKSMTVLGQFNLGFILAL 445
Query: 632 LDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNG 691
+FI+DQHA+DEKY +E L Q + QPL++ L+L LT ++E + +R+ G
Sbjct: 446 HGNMIFIIDQHASDEKYRYETLQQIAMTTFQPLVQKLELTLTYQQERLILQWKQSLRERG 505
Query: 692 FSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGE----CSIISSYKMD 747
F LE+ F+L AVP + + G+ D++++++ L G+ C
Sbjct: 506 FVLEQIEKD-GRDYFQLIAVPHIRDLHLGIADLEEILAKLGPASGQRVPHC--------- 555
Query: 748 TADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHL 807
+R AS+ACR + MIGD L +M I+E++ + PWNCPHGRPTMR L
Sbjct: 556 -------TRTLKYFASKACRQATMIGDPLSYAKMCAIIENMGRIEQPWNCPHGRPTMRLL 608
Query: 808 VDLT 811
L+
Sbjct: 609 AVLS 612
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/194 (34%), Positives = 97/194 (50%), Gaps = 27/194 (13%)
Query: 79 VRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP 138
++ + QAYAL + GVR N + K KS +L+T+GS+ L++N+I+VFG L
Sbjct: 117 IKCIECVQAYALSSTGVRINFLNVSSKGSKSNILQTKGSNVLRENVISVFGAAFCKSLLD 176
Query: 139 VAI---------------------------CKSDSCKVEGFLSKPGQGSGRNLGDRQYFF 171
+ + V G LSKP G GR DRQ+ F
Sbjct: 177 IRFEFTHKSNTNDSSVKLDKITAETFNLEEAHASPVVVSGLLSKPQLGCGRTGRDRQFIF 236
Query: 172 VNDRPVDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSI 231
VN RPVD+ KVSK +N+ Y + Q PI I+N V DVN++PDKR + +E ++
Sbjct: 237 VNRRPVDIAKVSKSINDTYHDFVTTQNPIFILNISVDPGWIDVNISPDKRLLAILNEAAL 296
Query: 232 LHALREGLQEIYSP 245
+ ++EG+Q P
Sbjct: 297 IQGIQEGIQRSLRP 310
>gi|154344651|ref|XP_001568267.1| mismatch repair protein [Leishmania braziliensis MHOM/BR/75/M2904]
gi|134065604|emb|CAM43374.1| mismatch repair protein [Leishmania braziliensis MHOM/BR/75/M2904]
Length = 840
Score = 143 bits (360), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 87/237 (36%), Positives = 125/237 (52%), Gaps = 20/237 (8%)
Query: 580 AATLELSQPENEERKARALAAATTE-LERLFRKEDFGRMKVIGQFNLGFIIGKL-DQDLF 637
A L S + + +R L A T + L F K F M+VIGQFN GFI+ L + D+F
Sbjct: 613 AVVLPASTKKRDRASSRTLGAQTEDDLNYYFNKNSFKEMRVIGQFNHGFIVATLPNGDVF 672
Query: 638 IVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEED 697
IVDQHA+DEKYN+ERL ++ QPL+ P+ + ++ E +A H ++ +GF +
Sbjct: 673 IVDQHASDEKYNYERLVRAYEATPQPLVLPVSVAMSTHEVDLAMEHKLALQHHGFKVNRG 732
Query: 698 PHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSR- 756
+ + L +P+ DV +L+ I Y T P R
Sbjct: 733 SDDTKLMVYSLPVLPYD---VVSASDVMELVQQ----------IVQYGTITK----PLRA 775
Query: 757 VRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTI 813
V +A++ACRSSIMIG L M+ ILE L +L+ PWNCPHGRPT+R L ++ +
Sbjct: 776 VWHSMATKACRSSIMIGTPLTMKRMKLILERLGELDQPWNCPHGRPTLRLLCNIAEL 832
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 39/62 (62%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I ++ +I AGQVI DL+S VKEL EN+LDA A ++ I L YG + V D+G G
Sbjct: 2 IARLDGACARKIAAGQVITDLTSVVKELTENALDAKAATVTIRLLNYGLDEIVVDDDGTG 61
Query: 72 IS 73
+S
Sbjct: 62 LS 63
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 49/102 (48%), Gaps = 7/102 (6%)
Query: 149 VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGA--NSRQYPIAIMNFI 206
+ G +SK G GR D Q F ++ R VDLP++ K +N+ + N+ Q
Sbjct: 285 LSGLVSKVNSG-GRLSSDNQVFALDGRLVDLPRLGKALNDAFTQCLPNASQRLHVAFFLQ 343
Query: 207 VPTRAC---DVNVTPDKRKVFFSDECSIL-HALREGLQEIYS 244
V T A DVN+TP+KRKV E + R LQE S
Sbjct: 344 VKTNASLQYDVNLTPNKRKVLLVQEDRLADEVYRRALQEFGS 385
>gi|355747495|gb|EHH51992.1| PMS2 like protein, partial [Macaca fascicularis]
Length = 747
Score = 143 bits (360), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 77/158 (48%), Positives = 99/158 (62%), Gaps = 15/158 (9%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLT 673
F M+++GQFNLGFII KL++DLFIVDQHA DEKYNFE L Q TVL Q L+ P L+LT
Sbjct: 604 FAEMEIVGQFNLGFIITKLNEDLFIVDQHATDEKYNFEMLQQHTVLQGQRLIAPQTLNLT 663
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
E V +++I RKNGF D +A R +L ++P SK TFG +D+ +LI L+D
Sbjct: 664 AVNEAVLIENLEIFRKNGFDFVIDENAPVTERAKLISLPTSKNWTFGPQDIDELIFLLSD 723
Query: 734 NQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSI 770
+ G +C PSRV+ M ASRACR S+
Sbjct: 724 SPG--------------VMCRPSRVKQMFASRACRKSV 747
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/180 (37%), Positives = 102/180 (56%), Gaps = 16/180 (8%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
+ V + QAY +I+ G+R CTN G+ + V+ T GS S+K+NI +VFG + + V
Sbjct: 176 KMVQVLQAYCIISAGIRVSCTNQLGQGKRQPVVCTGGSPSIKENIGSVFGQKQQSLIPFV 235
Query: 140 AICKSDS-CK---------------VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVS 183
+ SDS C+ + GF+S+ G GR+ DRQ+FF+N RP D KVS
Sbjct: 236 QVPPSDSVCEEYGLSCSDALHNLFYISGFISQCAHGVGRSSTDRQFFFINRRPCDPAKVS 295
Query: 184 KLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIY 243
+LVNE+Y N QYP ++N V + D+NVTPDKR++ +E +L L+ L ++
Sbjct: 296 RLVNEVYHMYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLIGMF 355
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 55/67 (82%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+PI++ VH+IC+GQV+ LS+AVKELVENSLDAGAT+I++ LK+YG + +V DNGCG
Sbjct: 8 IKPIDRKSVHQICSGQVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSDNGCG 67
Query: 72 ISPNNFK 78
+ NF+
Sbjct: 68 VEEENFE 74
>gi|389594671|ref|XP_003722558.1| mismatch repair protein [Leishmania major strain Friedlin]
gi|323363786|emb|CBZ12792.1| mismatch repair protein [Leishmania major strain Friedlin]
Length = 840
Score = 143 bits (360), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 88/240 (36%), Positives = 125/240 (52%), Gaps = 20/240 (8%)
Query: 580 AATLELSQPENEERKARALAAATTE-LERLFRKEDFGRMKVIGQFNLGFIIGKL-DQDLF 637
A L S + +R L A T + L F K F M+VIGQFN GFII L + D+F
Sbjct: 613 AVVLSASTQTCDRPSSRTLGAQTADDLNHYFTKNSFKEMRVIGQFNHGFIIAVLPNGDVF 672
Query: 638 IVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEED 697
+VDQHA+DEKYN+ERL ++ QPL+ P+ + ++ E +A H ++ +GF +
Sbjct: 673 VVDQHASDEKYNYERLVRAYEATPQPLVMPVSVAMSAHEVDLAVEHKLALQHHGFKVSRG 732
Query: 698 PHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSR- 756
L + L +P+ DV +L+ L Y T P R
Sbjct: 733 SDDTKLLVYSLPVLPYD---VVSASDVMELVQQLV----------QYGTITK----PLRA 775
Query: 757 VRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKN 816
V +A++ACRSSIMIG L M+ ILE L+ L+ PWNCPHGRPT+R L ++ + +
Sbjct: 776 VWHSMATKACRSSIMIGTPLTVKRMKLILERLSQLDQPWNCPHGRPTLRLLCNIVDLSRG 835
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 40/62 (64%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I ++ ++ AGQVI DL+S VKEL EN+LDA AT++ I L YG + V D+G G
Sbjct: 2 ITRLDGASARKLAAGQVITDLTSVVKELSENALDAKATTVTIRLINYGLDEIVVDDDGTG 61
Query: 72 IS 73
IS
Sbjct: 62 IS 63
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 12/86 (13%)
Query: 151 GFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELY----KGANSRQYPIAIMNFI 206
G +SK G GR D Q F ++ R VDLP++ K +N+ + A+ R Y + F+
Sbjct: 287 GLVSKV-SGGGRLSSDHQVFALDGRLVDLPRLGKALNDAFIQCLPNASQRLY---VAFFL 342
Query: 207 VPTRAC----DVNVTPDKRKVFFSDE 228
R DVN+TP+KRKV + E
Sbjct: 343 QVKRNASLQYDVNLTPNKRKVLLAQE 368
>gi|401429358|ref|XP_003879161.1| mismatch repair protein [Leishmania mexicana MHOM/GT/2001/U1103]
gi|322495411|emb|CBZ30715.1| mismatch repair protein [Leishmania mexicana MHOM/GT/2001/U1103]
Length = 840
Score = 142 bits (358), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 85/222 (38%), Positives = 120/222 (54%), Gaps = 20/222 (9%)
Query: 595 ARALAAATTE-LERLFRKEDFGRMKVIGQFNLGFIIGKL-DQDLFIVDQHAADEKYNFER 652
+R L A T + L F K F M+VIGQFN GFII L + D+F+VDQHA+DEKYN+ER
Sbjct: 628 SRTLGAQTADDLNHYFNKNSFKEMRVIGQFNHGFIIAVLPNGDVFVVDQHASDEKYNYER 687
Query: 653 LSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVP 712
L ++ QPL+ P+ + ++ E +A H ++ +GF + L + L +P
Sbjct: 688 LVRAYEATPQPLVMPVPVAMSAHEVDLAVEHKLALQHHGFKVSRGSDDTKLLVYSLPVLP 747
Query: 713 FSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSR-VRAMLASRACRSSIM 771
+ DV +L+ L Y T P R V +A++ACRSSIM
Sbjct: 748 YD---VVSASDVMELVQQLV----------QYGTITK----PLRAVWHSMATKACRSSIM 790
Query: 772 IGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTI 813
IG L M+ ILE L+ L+ PWNCPHGRPT+R L ++ +
Sbjct: 791 IGTPLTVKRMKLILERLSQLDQPWNCPHGRPTLRLLCNIADL 832
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 40/62 (64%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I ++ ++ AGQVI DL+S VKEL EN+LDA AT++ I L YG + V D+G G
Sbjct: 2 ITRLDGASARKLAAGQVITDLTSVVKELSENALDAKATTVTIRLINYGLDEIVVDDDGTG 61
Query: 72 IS 73
IS
Sbjct: 62 IS 63
Score = 47.0 bits (110), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
Query: 151 GFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGA--NSRQYPIAIMNFIVP 208
G +SK G GR GD Q F ++ R VDLP++ K +N+ + N+ Q V
Sbjct: 287 GLVSKV-SGGGRLSGDHQVFALDGRLVDLPRLGKALNDAFTQCLPNASQRLHVAFFLQVK 345
Query: 209 TRAC---DVNVTPDKRKVFFSDE 228
T A DVN+ P+KRKV + E
Sbjct: 346 TNALLQYDVNLAPNKRKVLLAQE 368
>gi|402468764|gb|EJW03872.1| DNA mismatch repair protein MutL [Edhazardia aedis USNM 41457]
Length = 1056
Score = 142 bits (357), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 113/203 (55%), Gaps = 22/203 (10%)
Query: 610 RKEDFGRMKVIGQFNLGFIIGKL----DQDLFIVDQHAADEKYNFERLSQSTVLNQQPLL 665
+K D G + +IGQFN GFI+ KL + L IVDQHAADE +E L L +Q L+
Sbjct: 864 KKSDLGNLNIIGQFNHGFILSKLVNFEKELLIIVDQHAADEIATYETLENDFYLKKQRLI 923
Query: 666 RPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVK 725
PL ++LT +E+ + ++ I+R+NGF L+E+ + L VP K F ED
Sbjct: 924 VPLPINLTLADEIFINSNIQILRRNGFDLDEN--------YNLTYVPIYKNNIFTAEDFW 975
Query: 726 DLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKIL 785
DL+ E I Y D C +++ ++AS+ACRSS MIG L +M+KI+
Sbjct: 976 DLVE-------EIKIAPIY--DKKYIFCK-KIKEIMASKACRSSKMIGQHLTHIDMEKII 1025
Query: 786 EHLADLNSPWNCPHGRPTMRHLV 808
+ L+ L PW CPHGRP + L+
Sbjct: 1026 KKLSTLRHPWKCPHGRPVFKILM 1048
>gi|407860834|gb|EKG07534.1| mismatch repair protein MLH1, putative [Trypanosoma cruzi]
Length = 774
Score = 142 bits (357), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 82/244 (33%), Positives = 127/244 (52%), Gaps = 25/244 (10%)
Query: 586 SQPENEERKARALAAATTE-----LERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVD 640
S P RK R + TE L K F M + GQFN GFI+ L D+F++D
Sbjct: 548 SIPFKRTRKERQTFTSLTEQTENQLATYLDKSSFKEMIIHGQFNHGFILASLGDDMFVID 607
Query: 641 QHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLE--EDP 698
QHAADEK+N+E L QPLL + + + P + +A +H + +R++GF +E ED
Sbjct: 608 QHAADEKFNYECLLSQYSARPQPLLAAVSVSMDPHDVDLAVLHSEELRQHGFIVERGEDA 667
Query: 699 HALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVR 758
+ L + +VP + G D+ +L+ +A + S +
Sbjct: 668 NKLL-----VYSVPVLQYEAVGPHDIVELVQQIALYGNITKPLRS-------------LW 709
Query: 759 AMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKNID 818
+A++ACRSSIMIG AL M+ ++ L +L PWNCPHGRPT+RH+ ++++ +++
Sbjct: 710 HSMATKACRSSIMIGTALSEKTMRSVVSRLGELEQPWNCPHGRPTLRHVACVSSLMRSMK 769
Query: 819 ENGA 822
E A
Sbjct: 770 EASA 773
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 43/62 (69%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR ++ ++ AGQVI DLSS +KELVENSLDAGA ++ + ++ YG + V D+G G
Sbjct: 2 IRRLDAASARKLSAGQVITDLSSVLKELVENSLDAGAHTVTVRIENYGLDKIVVNDDGSG 61
Query: 72 IS 73
++
Sbjct: 62 LA 63
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 74/157 (47%), Gaps = 15/157 (9%)
Query: 81 AVFLCQAYALIAKGVRFVCTN-TTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
A L + YAL VR + T+ + ++ + ++ G++ + + +G + V
Sbjct: 190 ATLLMKQYALSHPHVRLLMTHCLSPQSAPATLVSLTGTNDIHRALAEAYGGRYLAEMNRV 249
Query: 140 AICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYK----GANS 195
+ + GF+SK SGR D Q ++ R VDLP +SK V + Y A
Sbjct: 250 E-WEFSFGTITGFVSK--VTSGRLSADMQVLALDGRLVDLPIISKAVTDAYAECQPNAAQ 306
Query: 196 RQYPIAIMNFI----VPTRACDVNVTPDKRKVFFSDE 228
R YP+ ++ VP DVN+ P+KRKV F++E
Sbjct: 307 RAYPVFFLHLSCGNHVP---YDVNLEPNKRKVLFTEE 340
>gi|118482038|gb|ABK92950.1| unknown [Populus trichocarpa]
Length = 79
Score = 141 bits (356), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 63/78 (80%), Positives = 69/78 (88%)
Query: 746 MDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMR 805
MDTADSVCPSRV AM ASRACRSS+MIGDALGRNEMQKILEHL DL SPWNCPHGRPTMR
Sbjct: 1 MDTADSVCPSRVHAMFASRACRSSVMIGDALGRNEMQKILEHLVDLKSPWNCPHGRPTMR 60
Query: 806 HLVDLTTIRKNIDENGAG 823
HL+D+++I + DE AG
Sbjct: 61 HLIDMSSIYERPDETEAG 78
>gi|403370380|gb|EJY85051.1| ATP-binding protein required for mismatch repair in mitosis and
meiosis [Oxytricha trifallax]
Length = 1344
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 126/229 (55%), Gaps = 13/229 (5%)
Query: 605 LERLFRKEDFGRMKVIGQFNLGFIIGKLDQ-DLFIVDQHAADEKYNFERLSQSTVLNQQP 663
L + F K++F ++K+IGQFN GF+I L++ DLFI+DQHA DE++N E+ + + QP
Sbjct: 223 LRKKFAKKEFLKLKIIGQFNDGFVIATLNKNDLFILDQHACDERFNLEKFTSEVKIKSQP 282
Query: 664 LLRPLKLDLTPEEEVVASMHMDIIRKNGFSL---EEDPHALAGLRFRLKAV-------PF 713
L + L +++ + ++ + GF E+D L F+++ V P
Sbjct: 283 LAKHLITEVSLSSYQLIQNYLSMFEAYGFKFYVKEKDLENLNTPLFQVETVSLNLTNLPT 342
Query: 714 SKKITFGVEDVKDLISTLA--DNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIM 771
S FG D +LI++L D E + + + + + P ++ A+LA ACR ++M
Sbjct: 343 SNDTQFGPSDFHNLITSLRNFDANKELQQKTRTQQELFEYLMPKKIHAVLALNACRKAVM 402
Query: 772 IGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKNIDEN 820
IG L +M+ +++HL L PW C HGRPTMR+L+++ + + +N
Sbjct: 403 IGKKLDSRKMRSLVDHLYKLKDPWICAHGRPTMRYLLNIQDFKDQVIDN 451
>gi|71649195|ref|XP_813339.1| mismatch repair protein PMS1 [Trypanosoma cruzi strain CL Brener]
gi|70878213|gb|EAN91488.1| mismatch repair protein PMS1, putative [Trypanosoma cruzi]
Length = 774
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 81/244 (33%), Positives = 127/244 (52%), Gaps = 25/244 (10%)
Query: 586 SQPENEERKARALAAATTE-----LERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVD 640
S P RK R A+ TE + K F M + GQFN GFI+ L D+F++D
Sbjct: 548 SIPFKRTRKERQTFASLTEQTENQIATYLDKSSFKEMIIHGQFNHGFILASLGDDMFVID 607
Query: 641 QHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLE--EDP 698
QHAADEK+N+E L QPLL + + + P + +A +H + +R++GF+++ ED
Sbjct: 608 QHAADEKFNYECLLSQYKARPQPLLAAVSVSMDPHDVDLAVLHSEELRQHGFTVKRGEDA 667
Query: 699 HALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVR 758
+ L + +VP + G D+ +L+ +A + S +
Sbjct: 668 NKLL-----VYSVPVLQYEAVGPHDIVELVQQIALYGNITKPLRS-------------LW 709
Query: 759 AMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKNID 818
+A++ACRSSIMIG AL M+ ++ L +L PWNCPHGRPT+RH+ +++ ++
Sbjct: 710 HSMATKACRSSIMIGTALSEKTMRSVVSRLGELEQPWNCPHGRPTLRHVACVSSFMPSMK 769
Query: 819 ENGA 822
E A
Sbjct: 770 EASA 773
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 43/62 (69%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ ++ ++ AGQVI DLSS +KELVENSLDAGA ++ + ++ YG + V D+G G
Sbjct: 2 IKRLDAASARKLSAGQVITDLSSVLKELVENSLDAGAHTVTVRIENYGLDKIVVNDDGSG 61
Query: 72 IS 73
++
Sbjct: 62 LA 63
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 75/157 (47%), Gaps = 15/157 (9%)
Query: 81 AVFLCQAYALIAKGVRFVCTN-TTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
A L + YAL VR + T+ + ++ + ++ G++ + + +G + V
Sbjct: 190 ATLLMKQYALSHPHVRLLMTHCLSPQSAPATLVSLTGTNDIHRALAEAYGGRYLADMNRV 249
Query: 140 AICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYK----GANS 195
+ + GF+SK SGR D Q ++ R VDLP +SK V++ Y A
Sbjct: 250 E-WEFSFGTITGFVSK--VTSGRLSADMQVLALDGRLVDLPIISKAVSDAYAECQPNAAQ 306
Query: 196 RQYPIAIMNFI----VPTRACDVNVTPDKRKVFFSDE 228
R YP+ ++ VP DVN+ P+KRKV F++E
Sbjct: 307 RAYPVFFLHLSCGNHVP---YDVNLAPNKRKVLFTEE 340
>gi|403375263|gb|EJY87602.1| DNA mismatch repair protein [Oxytricha trifallax]
Length = 783
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 137/252 (54%), Gaps = 8/252 (3%)
Query: 563 QSSCHTSGSVKMRRCFAAATLELSQPENEERKARALAAATTELERL-FRKEDFGRMKVIG 621
Q+ S ++R F +T E Q ++ R + ++ R F K++F R++++G
Sbjct: 500 QTVSKFSFKQRLRPKFQRSTYENHQYYHD----RLMFDLNNDMMRKKFWKKEFMRLRILG 555
Query: 622 QFNLGFIIGKLDQ-DLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVA 680
QFN GFIIG L+Q D+FI+DQHA DE+ + E+ + S ++ QPL++P+ + E +
Sbjct: 556 QFNNGFIIGNLNQNDIFILDQHACDERLHLEKYTGSLKIDSQPLIQPIIIQYDTELYEIL 615
Query: 681 SMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSI 740
+ I GF E+ ++ ++ ++P S F D +L++ + + +
Sbjct: 616 ETYQRIFNAFGFQFEKMFWNKYQVQIKVHSLPQSNDTQFEESDFHNLVTAIRNFDTDDRT 675
Query: 741 ISSYKMDTA--DSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCP 798
+ Y D D + P ++ +LA +ACR S+M+G L R + +I+ L++L PW C
Sbjct: 676 KNKYITDQQIFDYLMPKKIMQVLALKACRKSVMVGKKLERRQQYEIVSGLSNLKDPWICA 735
Query: 799 HGRPTMRHLVDL 810
HGRPTMR+++D+
Sbjct: 736 HGRPTMRYIMDI 747
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 85/217 (39%), Gaps = 45/217 (20%)
Query: 29 IKDLSSAVK----ELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFKVRAVFL 84
++DL + ++ +LVEN+L+ GA IE+ L + G+E F V+DNG GI N F ++
Sbjct: 36 VRDLDTLLRIWVIQLVENALERGAKYIEVCLYQLGKEGFDVIDNGRGIDENEFT--DDYV 93
Query: 85 CQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKS 144
++ K V + N K Q S
Sbjct: 94 AAELTILTKSVHYPDACVVKYN-----HKMQRSEKF----------------------YV 126
Query: 145 DSCKV--EGFLSKPGQGSGRNLGDRQY-------FFVNDRPVDLPKVSK-LVNELYKG-- 192
DS K+ E Q NL D+ + +VN RPV+ K K + +LY+
Sbjct: 127 DSRKLLDEELRFTNSQTVIDNLNDKNFEPQQCIHMYVNGRPVESTKRMKAIFQQLYRDFM 186
Query: 193 ANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDEC 229
+ P M+ + D+ + D RK FF E
Sbjct: 187 IAEKTIPFVFMSIETTHQNYDLKLQADIRKFFFKPEI 223
>gi|340056567|emb|CCC50900.1| mismatch repair protein [Trypanosoma vivax Y486]
Length = 799
Score = 139 bits (350), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 85/218 (38%), Positives = 116/218 (53%), Gaps = 22/218 (10%)
Query: 600 AATTELERLFRKED--FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQST 657
A TE E R E F M + GQFN GFII L D+F++DQHAADEK+N+E L
Sbjct: 590 AEQTEEELTLRLEKSCFTNMTIHGQFNHGFIIASLHDDVFVIDQHAADEKHNYECLLSRY 649
Query: 658 VLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLE--EDPHALAGLRFRLKAVPFSK 715
V QPL+ P+ L + P +A H +RK+GF ++ +D L L +VP
Sbjct: 650 VSKLQPLVCPVLLSVDPRSVDLAIEHSRELRKHGFIVKRSDDDDKLHVL-----SVPLLP 704
Query: 716 KITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDA 775
EDV +L+ L D Y M C R +A++ACR+SIMIG
Sbjct: 705 YEVVKAEDVIELLQQLID----------YGMIVKPMRCVWR---SMATKACRTSIMIGRV 751
Query: 776 LGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTI 813
L EM I+ L+ L+ PWNCPHGRPT+RH+ ++++
Sbjct: 752 LDEKEMTTIVNRLSGLDQPWNCPHGRPTIRHIAKISSL 789
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 46/65 (70%)
Query: 9 SPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDN 68
S I +++ ++ AGQVI DLSS +KEL+ENSLDAGA ++++ +++YG V D+
Sbjct: 9 SSIITRLDEASARKLSAGQVITDLSSVLKELIENSLDAGAHTVKVCVEDYGLGSITVEDD 68
Query: 69 GCGIS 73
GCG++
Sbjct: 69 GCGMA 73
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 70/154 (45%), Gaps = 9/154 (5%)
Query: 81 AVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKT-QGSSSLKDNIITVFGMNIYNCLEPV 139
A L + YAL +R + T+ V L + G+ + ++ +G + V
Sbjct: 199 ATSLLKQYALSHPHIRLLVTHRVSPQSAPVTLVSLTGTGDTQRSLAEAYGGRYLATMTRV 258
Query: 140 AICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYK----GANS 195
S V G++S+ +GR+ D Q ++ R VDLP VS ++ Y A
Sbjct: 259 EWDLSFGI-VTGYVSQ--LRNGRHSPDMQVLALDGRLVDLPAVSNAISNAYAECQPSAAQ 315
Query: 196 RQYPIAIMNF-IVPTRACDVNVTPDKRKVFFSDE 228
R +P+ +N + + DVN+ P+KRKV ++E
Sbjct: 316 RVFPVFFLNISCSASVSYDVNLAPNKRKVLITEE 349
>gi|269861251|ref|XP_002650338.1| DNA mismatch repair protein PMS1 [Enterocytozoon bieneusi H348]
gi|220066221|gb|EED43713.1| DNA mismatch repair protein PMS1 [Enterocytozoon bieneusi H348]
Length = 578
Score = 139 bits (350), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 82/198 (41%), Positives = 117/198 (59%), Gaps = 22/198 (11%)
Query: 611 KEDFGRMKVIGQFNLGFIIGKL-DQD---LFIVDQHAADEKYNFERLSQSTVLNQQPLLR 666
K DF +M+VIGQFN GFI+ KL QD L +VDQHAADE NFE L + +++Q L+
Sbjct: 391 KADFNKMEVIGQFNKGFILCKLIKQDKSYLILVDQHAADEIKNFEYLKNTFTISKQSLVT 450
Query: 667 PLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKD 726
P+KL L ++++ H I+ KNGF + D H + F LK VP K F +D+ D
Sbjct: 451 PIKLTLNSIQKLILKEHNTILNKNGFIV--DVHNDS---FWLKTVPQYKGHCFSKDDLYD 505
Query: 727 LISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILE 786
LIS L D+ + ++ S+ ++AS+ACR S MIG L ++++ I++
Sbjct: 506 LISKLKDS-------------SDPNIMCSKFEDIMASKACRQSEMIGTHLPLSKLKNIVQ 552
Query: 787 HLADLNSPWNCPHGRPTM 804
+L+ LN PW CPHGRPT
Sbjct: 553 NLSLLNIPWKCPHGRPTF 570
>gi|387594125|gb|EIJ89149.1| hypothetical protein NEQG_00968 [Nematocida parisii ERTm3]
gi|387595675|gb|EIJ93298.1| hypothetical protein NEPG_01640 [Nematocida parisii ERTm1]
Length = 625
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/197 (34%), Positives = 114/197 (57%), Gaps = 21/197 (10%)
Query: 612 EDFGRMKVIGQFNLGFIIGKLDQD----LFIVDQHAADEKYNFERLSQSTVLNQQPLLRP 667
E+ ++ ++GQFN GFII L ++ ++I+DQHAADE N+E+L + V +Q L++P
Sbjct: 434 EELSKLVIVGQFNNGFIICTLAKEGNIHMYIIDQHAADEAVNYEQLRSTVVYKKQKLIQP 493
Query: 668 LKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDL 727
+K+ LT + V +M+ +++NGF L + L VP + +G ++ ++
Sbjct: 494 MKVKLTEYDMHVIRENMEYVKRNGFGLNAELTELI-------EVPSYEDRIYGESELLEV 546
Query: 728 ISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEH 787
I ++ ++ ++ + + +R +LAS+ACRSSIMIGD L +M KI+
Sbjct: 547 IESIKEDN----------IEEGKHIIFTELRRLLASKACRSSIMIGDVLNMQQMSKIVSS 596
Query: 788 LADLNSPWNCPHGRPTM 804
L+ PWNCPHGRPT+
Sbjct: 597 LSKTTRPWNCPHGRPTI 613
Score = 39.3 bits (90), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 23 ICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVV-DNGCGISPNNF 77
I Q++ D+ +KE++ NS+DA ATSI I + + ++ DNG GI N +
Sbjct: 13 IQTEQILPDIHRLIKEMIHNSIDAQATSITITICTVDKSIVYLIEDNGTGIEVNEY 68
>gi|260801098|ref|XP_002595433.1| hypothetical protein BRAFLDRAFT_69265 [Branchiostoma floridae]
gi|229280679|gb|EEN51445.1| hypothetical protein BRAFLDRAFT_69265 [Branchiostoma floridae]
Length = 429
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 108/190 (56%), Gaps = 15/190 (7%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCL--- 136
R + + AY +I+ VR CTN GK ++ V+ T G+ ++K+N+ VFG + L
Sbjct: 173 RMLTVLYAYCIISTNVRITCTNQAGKGKRTTVVSTNGNVNMKENVTNVFGPKQLSGLLQF 232
Query: 137 ----------EPVAICKSDS--CKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSK 184
E + + ++ + G+LS G GR DRQYFF+N RP DLPKVSK
Sbjct: 233 VQNRPSQEVAEEMGVKGGNTELFSITGYLSTCSHGQGRGSADRQYFFINKRPCDLPKVSK 292
Query: 185 LVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYS 244
+VNE+Y N QYP +++ + + DVNVTPDKR+V+ +E ++L ++ L ++Y
Sbjct: 293 VVNEVYHMYNRHQYPFVVLDISLARDSVDVNVTPDKRQVWLQEERTLLAIIKTSLMQMYE 352
Query: 245 PNNASYSVNK 254
P + Y+VN+
Sbjct: 353 PTASVYAVNQ 362
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 57/67 (85%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+PI++ VH+IC+GQV+ +L++A+KELVENSLDAGAT+I+I LKEYG E +VVDNG G
Sbjct: 5 IQPIDRHSVHQICSGQVVLNLATAMKELVENSLDAGATNIDIRLKEYGSELLEVVDNGSG 64
Query: 72 ISPNNFK 78
+ +NF+
Sbjct: 65 VEESNFE 71
>gi|71746104|ref|XP_827624.1| mismatch repair protein PMS1 [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|13027781|gb|AAK08649.1| putative mismatch repair protein PMS1 [Trypanosoma brucei]
gi|70831789|gb|EAN77294.1| mismatch repair protein PMS1, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 788
Score = 137 bits (344), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 113/210 (53%), Gaps = 16/210 (7%)
Query: 604 ELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQP 663
EL KE F M V GQFN GFI+ LD ++F++DQHAADEK N+E L V QP
Sbjct: 585 ELTLYLGKESFKNMVVHGQFNHGFIVTSLDDNIFVIDQHAADEKGNYEHLMSHYVARPQP 644
Query: 664 LLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVED 723
L P+ + + P+ +A H + +R++GF ++ L + +P+ ++
Sbjct: 645 LFSPVPVSMEPQAVDLAVDHAEELRQHGFIVQRSDDTNKLLVLSVPVIPYE---VVDPQN 701
Query: 724 VKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQK 783
V +LI L Y + C V +A++ACRSSIM+G L +M+
Sbjct: 702 VVELIRQLVH----------YNTISKPMRC---VWHSMATKACRSSIMVGTMLSEKKMRS 748
Query: 784 ILEHLADLNSPWNCPHGRPTMRHLVDLTTI 813
+++ + +L PWNCPHGRPT+RH+ ++++
Sbjct: 749 VVDRMGELEQPWNCPHGRPTVRHVSKISSL 778
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 73/154 (47%), Gaps = 9/154 (5%)
Query: 81 AVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKT-QGSSSLKDNIITVFGMNIYNCLEPV 139
A L + YAL VR + T+ G + V L + G+ + + +G + +E V
Sbjct: 189 ATLLMKQYALSHPHVRLLMTHRAGPDSAPVTLVSLTGTGDPQRALAEAYGGRVIANMERV 248
Query: 140 AICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYK----GANS 195
+ + G++SK +GR D Q F ++ R VDLP ++K VN+ Y A
Sbjct: 249 E-WELTFGTITGYVSK--GNAGRLSSDMQVFALDGRLVDLPMMAKAVNDAYAESLPNAAQ 305
Query: 196 RQYPIAIMNFIV-PTRACDVNVTPDKRKVFFSDE 228
R +P ++ + DVN+ PDKRKV SDE
Sbjct: 306 RTFPAFFLHVSSGESLPYDVNLVPDKRKVLISDE 339
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 41/58 (70%)
Query: 15 INKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGI 72
+++G ++ AGQVI +LSS VKELVENSLDAGA ++ I +++ G V D+G G+
Sbjct: 5 LDEGSSRKLSAGQVITNLSSVVKELVENSLDAGARTVAIRVEDSGAGNITVEDDGSGM 62
>gi|261331832|emb|CBH14826.1| mismatch repair protein PMS1, putative [Trypanosoma brucei
gambiense DAL972]
Length = 788
Score = 136 bits (343), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 113/210 (53%), Gaps = 16/210 (7%)
Query: 604 ELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQP 663
EL KE F M V GQFN GFI+ LD ++F++DQHAADEK N+E L V QP
Sbjct: 585 ELTLYLGKESFKNMVVHGQFNHGFIVTSLDDNIFVIDQHAADEKGNYEHLMSHYVARPQP 644
Query: 664 LLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVED 723
L P+ + + P+ +A H + +R++GF ++ L + +P+ ++
Sbjct: 645 LFSPVPVSMEPQAVDLAVDHAEELRQHGFIVQRSDDTNKLLVLSVPVIPYE---VVDPQN 701
Query: 724 VKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQK 783
V +LI L Y + C V +A++ACRSSIM+G L +M+
Sbjct: 702 VVELIRQLVH----------YNTISKPMRC---VWHSMATKACRSSIMVGTMLSEKKMRS 748
Query: 784 ILEHLADLNSPWNCPHGRPTMRHLVDLTTI 813
+++ + +L PWNCPHGRPT+RH+ ++++
Sbjct: 749 VVDRMGELEQPWNCPHGRPTVRHVSKISSL 778
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 73/154 (47%), Gaps = 9/154 (5%)
Query: 81 AVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKT-QGSSSLKDNIITVFGMNIYNCLEPV 139
A L + YAL VR + T+ G + V L + G+ + + +G + +E V
Sbjct: 189 ATLLMKQYALSHPHVRLLMTHRAGPDSAPVTLVSLTGTGDPQRALAEAYGGRVIANMERV 248
Query: 140 AICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYK----GANS 195
+ + G++SK +GR D Q F ++ R VDLP ++K VN+ Y A
Sbjct: 249 E-WELTFGTITGYVSK--GNAGRLSSDMQVFALDGRLVDLPMMAKAVNDAYAESLPNAAQ 305
Query: 196 RQYPIAIMNFIV-PTRACDVNVTPDKRKVFFSDE 228
R +P ++ + DVN+ PDKRKV SDE
Sbjct: 306 RTFPAFFLHVSSGESLPYDVNLVPDKRKVLISDE 339
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 41/58 (70%)
Query: 15 INKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGI 72
+++G ++ AGQVI +LSS VKELVENSLDAGA ++ I +++ G V D+G G+
Sbjct: 5 LDEGSSRKLSAGQVITNLSSVVKELVENSLDAGARTVAIRVEDSGAGNITVEDDGSGM 62
>gi|407408006|gb|EKF31592.1| mismatch repair protein MLH1, putative [Trypanosoma cruzi
marinkellei]
Length = 774
Score = 136 bits (343), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 82/238 (34%), Positives = 125/238 (52%), Gaps = 27/238 (11%)
Query: 593 RKARALAAATTE-----LERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEK 647
RK R + TE L K F M + GQFN GFI+ L D+F++DQHAADEK
Sbjct: 555 RKERQTFGSLTEQTENQLATYLDKSSFKEMIIHGQFNHGFILASLGDDMFVIDQHAADEK 614
Query: 648 YNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLE--EDPHALAGLR 705
+N+E L QPLL + + + P + +A +H + +R++GF ++ ED + L
Sbjct: 615 FNYECLLMQYTARPQPLLAAVSVSMDPHDVDLAVLHSEELRQHGFIVKRGEDANKLL--- 671
Query: 706 FRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSR-VRAMLASR 764
+ +VP + G D+ +L+ +A Y T P R + +A++
Sbjct: 672 --VYSVPVLQYEAVGPHDIVELVQQIA----------LYGKITK----PLRSLWHSMATK 715
Query: 765 ACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKNIDENGA 822
ACRSSIMIG AL M+ ++ L +L PWNCPHGRPT+RH+ ++++ + E A
Sbjct: 716 ACRSSIMIGTALSEKTMRSVVSRLGELEQPWNCPHGRPTLRHIACVSSLIPLVKEVSA 773
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 43/62 (69%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ ++ ++ AGQVI DLSS +KELVENSLDAGA ++ + ++ YG + V D+G G
Sbjct: 2 IKRLDAASARKLSAGQVITDLSSVLKELVENSLDAGAHTVTVRIENYGLDKIVVNDDGSG 61
Query: 72 IS 73
++
Sbjct: 62 LA 63
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 75/157 (47%), Gaps = 15/157 (9%)
Query: 81 AVFLCQAYALIAKGVRFVCTN-TTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
A L + YAL VR + T+ + ++ + ++ G++ + + +G + V
Sbjct: 190 ATLLMKQYALSHPHVRLLITHCLSPQSAPTTLVSLTGTNDIHRALAEAYGGRYLADMNRV 249
Query: 140 AICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYK----GANS 195
+ + GF+SK SGR D Q ++ R VDLP +SK V++ Y A
Sbjct: 250 E-WEFSFGTITGFVSK--VSSGRLSADMQVLALDGRLVDLPIISKAVSDAYAECQPNATQ 306
Query: 196 RQYPIAIMNFI----VPTRACDVNVTPDKRKVFFSDE 228
R YP+ ++ VP DVN+ P+KRKV F++E
Sbjct: 307 RAYPVFFLHLSCGNHVP---YDVNLAPNKRKVLFTEE 340
>gi|148687083|gb|EDL19030.1| postmeiotic segregation increased 2 (S. cerevisiae), isoform CRA_b
[Mus musculus]
Length = 794
Score = 135 bits (340), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 68/153 (44%), Positives = 94/153 (61%), Gaps = 15/153 (9%)
Query: 665 LRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDV 724
+RP L+LT E V +++I RKNGF D A R +L ++P SK TFG +D+
Sbjct: 656 IRPQTLNLTAVNEAVLIENLEIFRKNGFDFVIDEDAPVTERAKLISLPTSKNWTFGPQDI 715
Query: 725 KDLISTLADNQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGRNEMQK 783
+LI L+D+ G +C PSRVR M ASRACR S+MIG AL +EM+K
Sbjct: 716 DELIFMLSDSPG--------------VMCRPSRVRQMFASRACRKSVMIGTALNASEMKK 761
Query: 784 ILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKN 816
++ H+ +++ PWNCPHGRPTMRH+ +L I +N
Sbjct: 762 LITHMGEMDHPWNCPHGRPTMRHVANLDVISQN 794
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 105/192 (54%), Gaps = 17/192 (8%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
+ V + QAY +I+ GVR CTN G+ + V+ T GSS +K+NI +VFG L P
Sbjct: 174 KMVQVLQAYCIISAGVRVSCTNQLGQGKRQPVVCTSGSSGMKENIGSVFGQKQLQSLIPF 233
Query: 140 -------AICKSDSCK----------VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKV 182
A+C+ V GF+S+ G+GR+ DRQ+FF+N RP D KV
Sbjct: 234 VQLPPSDAVCEEYGLSTSRTPQNLFYVSGFISQCTHGAGRSATDRQFFFINQRPCDPAKV 293
Query: 183 SKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEI 242
SKLVNE+Y N QYP ++N V + D+NVTPDKR++ +E +L L+ L +
Sbjct: 294 SKLVNEVYHMYNRHQYPFVVLNVSVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLIGM 353
Query: 243 YSPNNASYSVNK 254
+ + +VN+
Sbjct: 354 FDSDANKLNVNQ 365
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 56/71 (78%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+PI+ VH+IC+GQV+ LS+AVKEL+ENS+DAGAT+I++ LK+YG + +V DNGCG
Sbjct: 6 IKPIDGKSVHQICSGQVVLSLSTAVKELIENSVDAGATTIDLRLKDYGVDLIEVSDNGCG 65
Query: 72 ISPNNFKVRAV 82
+ NF+ A+
Sbjct: 66 VEEENFEGLAL 76
>gi|353238796|emb|CCA70731.1| related to PMS1-DNA mismatch repair protein [Piriformospora indica
DSM 11827]
Length = 876
Score = 133 bits (335), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 107/188 (56%), Gaps = 20/188 (10%)
Query: 605 LERLFRKEDFGRMKVIGQFNLGFIIGKLDQ------DLFIVDQHAADEKYNFERLSQSTV 658
L R+ K DFGRM+++GQFNLGFI+ + + DLFIVDQHAADEKYNFE L +T
Sbjct: 695 LSRVINKADFGRMEILGQFNLGFIVVRARRMEDSMDDLFIVDQHAADEKYNFETLQMTTR 754
Query: 659 LNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSL--EEDPHALAGLRFRLKAVPFSKK 716
+ Q LLRP L+L+ +++VA ++DI++ NGF + + + L + P SK
Sbjct: 755 IESQRLLRPRPLELSAADKIVALENLDILQSNGFEVVAQSGSEEVINSDLLLVSQPVSKS 814
Query: 717 ITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDAL 776
F + D+ +L+ + D + V ++ RAM ASRACR SIMIGD L
Sbjct: 815 TVFDLSDLSELLHLMQD------------IPKGTMVRCTKARAMFASRACRKSIMIGDPL 862
Query: 777 GRNEMQKI 784
+M +
Sbjct: 863 TIPQMTAV 870
Score = 115 bits (289), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 107/194 (55%), Gaps = 24/194 (12%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVK-SVVLKTQGSSSLKDNIITVFG--------- 129
+A+ L AYAL F G +K ++T GS+SL++ I +++G
Sbjct: 176 KALNLLSAYAL------FPSLGKHGIKLKRQSQIQTDGSNSLRNAISSLWGSKGSENTVA 229
Query: 130 --MNIYNCLEPVAICKSD------SCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPK 181
+++ + + K V G +SK G GR+ DRQYFFVN RP +L K
Sbjct: 230 LSLDLLVAQDAATLKKRGLPMEELKINVSGIVSKFAVGCGRSSSDRQYFFVNRRPCNLSK 289
Query: 182 VSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQE 241
V K VNE+YK N+ Q P+ I++F VPT ACD+NV+PDKR +F E +++ +L+ L +
Sbjct: 290 VQKAVNEVYKTFNATQSPLLILDFTVPTAACDINVSPDKRTIFVHGEQNLIESLKVALSD 349
Query: 242 IYSPNNASYSVNKV 255
+ P+ +++SV +V
Sbjct: 350 HFQPSRSTFSVAEV 363
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 54/71 (76%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ I+K VHRI + QV+ DL +AVKELVEN+LDA ATSIE+ KEYG +V+DNG G
Sbjct: 5 IKAIDKSSVHRITSSQVVVDLQTAVKELVENALDAHATSIEVRFKEYGLAAIEVIDNGTG 64
Query: 72 ISPNNFKVRAV 82
ISP +++V A+
Sbjct: 65 ISPEDYEVVAL 75
>gi|209878770|ref|XP_002140826.1| DNA mismatch repair protein [Cryptosporidium muris RN66]
gi|209556432|gb|EEA06477.1| DNA mismatch repair protein, putative [Cryptosporidium muris RN66]
Length = 919
Score = 133 bits (334), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 87/268 (32%), Positives = 134/268 (50%), Gaps = 63/268 (23%)
Query: 609 FRKEDFGRMKVIGQFNLGFIIGKLDQ------DLFIVDQHAADEKYNFERLSQSTV-LNQ 661
F+K F +K++GQFN GFI+ L Q LFI+DQHAADEK FE+ + +
Sbjct: 652 FQKHLFNDLKIVGQFNKGFILATLFQPEVSSFHLFIIDQHAADEKTKFEKYNNDLRNIQT 711
Query: 662 QPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAG------------------ 703
Q LL PL + LTP +E A + DI NGF + ++ G
Sbjct: 712 QKLLSPLPMTLTPAQEQTALTYKDIFESNGFKYVFNTNSTIGKRIQLTQIPIIMGSPLQQ 771
Query: 704 ----------LRFRLKA------------VPFSKKITFGVED--------VKDLISTLAD 733
+++L+ V SK+I D +K+L T +D
Sbjct: 772 FDFLDLLTQITKYKLQVNFTSHDSINIGLVNVSKQIKNSCTDTNITSSQGIKNLEDTESD 831
Query: 734 NQGECSIISSYKMDTADSV-CPS-------RVRAMLASRACRSSIMIGDALGRNEMQKIL 785
++ + I+ + +T ++ CP+ R+ ++LAS+ACR ++M+GD L +M KI+
Sbjct: 832 DEEDVVIVINQGANTKSTLWCPTNRLPRPQRLWSILASKACRRAVMVGDDLNLTQMSKII 891
Query: 786 EHLADLNSPWNCPHGRPTMRHLVDLTTI 813
+++ L SPWNCPHGRP++RHL +LT I
Sbjct: 892 YNMSTLKSPWNCPHGRPSIRHLGNLTDI 919
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 62/122 (50%), Gaps = 17/122 (13%)
Query: 149 VEGFLSKPGQGSGRNLGDRQYFFVNDRPVD-LPKVSKLVNELYKG----ANSRQYPIAIM 203
+ GF+S +G R D Q + VN+RPV L S+ + +++ N + YP+ ++
Sbjct: 299 ITGFISSIDKG--RPSSDYQIYIVNNRPVSTLRTFSRAITSIHRTLSSYINKKWYPVFVL 356
Query: 204 NFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASYSVNKVEQLIEPEK 263
+P+ D+NVTPDKR + + IL L + LQ S+ V+K++ I +K
Sbjct: 357 KISLPSCLLDINVTPDKRIILLPNNVEIL--LIDKLQ--------SFLVDKLQNTIPMKK 406
Query: 264 SG 265
S
Sbjct: 407 SN 408
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 36/51 (70%)
Query: 22 RICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGI 72
++ + QVI +L +KEL+ENSLDA +++I I L + G + +V+DNG GI
Sbjct: 12 KLSSQQVITELKDCIKELIENSLDAESSNIIINLGDNGSSYIEVIDNGSGI 62
>gi|290979276|ref|XP_002672360.1| predicted protein [Naegleria gruberi]
gi|284085936|gb|EFC39616.1| predicted protein [Naegleria gruberi]
Length = 397
Score = 132 bits (333), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 78/219 (35%), Positives = 116/219 (52%), Gaps = 28/219 (12%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I ++ +HRIC+GQVI L+S +KEL+ENSLDA +T IEI G E +V DNG G
Sbjct: 166 ISKLSNNSIHRICSGQVIISLTSVIKELIENSLDASSTFIEIKFTNMGLECIEVSDNGNG 225
Query: 72 ISPNNFK--------VRAVFLCQAYALIAKGVRF-------------VCTNTTGKNVKSV 110
IS NNF+ + + + G R + T T + ++
Sbjct: 226 ISKNNFENIVKKHNTSKLINFTDLENISTFGFRGEALSSISCMAELQIFTKTESDKLGNL 285
Query: 111 VLKTQGSS-----SLKDNIITVFGMNIYNCLEPVAICKSDS--CKVEGFLSKPGQGSGRN 163
+ + L N +++FG+ + L+ V ++D K+ GF+S P +G GR+
Sbjct: 286 IYYDHDQNITKIEQLLHNYVSIFGLKDFKKLQKVDFIQNDPHFIKINGFISLPEKGCGRS 345
Query: 164 LGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQYPIAI 202
DRQ+ +VN+RPVDLPK++K +NE+YK N QYPI I
Sbjct: 346 SNDRQFLYVNNRPVDLPKITKCINEIYKEFNRNQYPIFI 384
>gi|300708140|ref|XP_002996256.1| hypothetical protein NCER_100672 [Nosema ceranae BRL01]
gi|239605541|gb|EEQ82585.1| hypothetical protein NCER_100672 [Nosema ceranae BRL01]
Length = 698
Score = 132 bits (332), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 115/205 (56%), Gaps = 29/205 (14%)
Query: 604 ELERLFRKEDFGRMKVIGQFNLGFIIGKLDQD----LFIVDQHAADEKYNFERLSQSTVL 659
E+ + +K DF M++IGQFN GFII +L ++ L IVDQHAADE +N+E + ++ +
Sbjct: 510 EISLVLKKNDFFDMEIIGQFNKGFIITRLVKNDKIYLIIVDQHAADEIFNYENIKKNAKI 569
Query: 660 NQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITF 719
+Q +L P++L L+P +++ ++ GF +E +L VP K F
Sbjct: 570 LKQKVLVPIELKLSPIDKLFVEENIVSFSIYGFDIE---------NMKLLTVPVFKGEEF 620
Query: 720 GVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRN 779
+ D +L+ N GE ++++ ++AS+ACR S+M+GD+L +
Sbjct: 621 NLNDFYELLDNFK-NGGEG---------------LTKIQKIMASKACRMSVMVGDSLNKA 664
Query: 780 EMQKILEHLADLNSPWNCPHGRPTM 804
+++KI++ L DL PW CPHGRPT
Sbjct: 665 KLEKIVKRLKDLEKPWKCPHGRPTF 689
Score = 42.7 bits (99), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ +++ I + Q I++ + VKEL+ENSLD+ AT I+I + +E +V DNG G
Sbjct: 2 IKNLDQKTSELIKSQQYIQNTYTIVKELIENSLDSNATEIKIFV---DDELIRVEDNGTG 58
Query: 72 I 72
I
Sbjct: 59 I 59
>gi|384490226|gb|EIE81448.1| hypothetical protein RO3G_06153 [Rhizopus delemar RA 99-880]
Length = 591
Score = 132 bits (331), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 68/192 (35%), Positives = 107/192 (55%), Gaps = 1/192 (0%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
+A+ + QAY++I+ + N + + V+ T + + NI +FG I + + P
Sbjct: 22 KALSILQAYSIISTNTKISVFNQSKSKPSTRVMYTNKNKDMTSNISNIFGAKILSQIIPF 81
Query: 140 AICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQYP 199
I D VEG++SKP G GR+ DRQ+FFVN RP LPK++K +NE+Y+ S QYP
Sbjct: 82 QI-NLDKGSVEGYISKPEWGLGRSSSDRQHFFVNGRPCILPKMAKALNEIYRSFISNQYP 140
Query: 200 IAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASYSVNKVEQLI 259
I +F +PT A DVNV+PDKR +F +E I + L+ + P+ +++ N + +
Sbjct: 141 FIIADFKIPTDAYDVNVSPDKRTIFIHEESKIAETIMSQLRSLLEPSRSTFQTNSLIKTP 200
Query: 260 EPEKSGPSSGAE 271
P +S S E
Sbjct: 201 SPVESPEGSKRE 212
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/147 (41%), Positives = 90/147 (61%), Gaps = 5/147 (3%)
Query: 589 ENEERKARALAAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLD-QDLFIVDQHAADEK 647
+N E +A+ A L R+ K DF RM+V+GQFNLGF+I LD QDL+I+DQHA+DEK
Sbjct: 442 QNTEDNDKAVEA----LNRVIHKPDFERMRVLGQFNLGFMITSLDDQDLYIIDQHASDEK 497
Query: 648 YNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFR 707
YNFE L Q+ +N Q L+ P DLT EE++ ++++ + NGF +E R R
Sbjct: 498 YNFETLQQTVKVNNQKLISPQIPDLTAAEELIVMDNIEVFKANGFDVEIITDNEPTKRLR 557
Query: 708 LKAVPFSKKITFGVEDVKDLISTLADN 734
+ + P +KK +D +LI L+++
Sbjct: 558 VLSQPVTKKAMLDKKDFSELIYLLSEH 584
>gi|259155136|ref|NP_001158811.1| mismatch repair endonuclease PMS2 [Salmo salar]
gi|223647526|gb|ACN10521.1| PMS1 protein homolog 2 [Salmo salar]
Length = 726
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 104/194 (53%), Gaps = 17/194 (8%)
Query: 79 VRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIY----- 133
+ + + Q+Y +++ GVR CTN TG+ ++ VL T G S++DNI +FG
Sbjct: 208 TKMIHVLQSYCIVSTGVRITCTNQTGQGKRTPVLCTSGRQSMRDNIGAIFGPKQLQSLLL 267
Query: 134 --------NCLEPVAICKSDSCK----VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPK 181
N E + +D K + GF+S+ G GR+ DRQ+F++N+RP D K
Sbjct: 268 FQQLSPTDNIKEDYGLSNADLPKDLFTISGFVSRGDHGVGRSATDRQFFYINNRPCDPSK 327
Query: 182 VSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQE 241
VSK+VNE+Y N QYP +N V + DVNVTPDKR++F +E +L L+ L
Sbjct: 328 VSKVVNEVYHTFNRHQYPFVALNITVASECVDVNVTPDKRQIFLQEEKLLLAILKSSLIA 387
Query: 242 IYSPNNASYSVNKV 255
+Y S+N +
Sbjct: 388 MYETGVNKISLNHM 401
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/68 (54%), Positives = 53/68 (77%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
TI+ I++ VH+IC+GQV+ L++AVKELVENS+DAGAT+++I LK+ G E +V DNG
Sbjct: 40 TIKAIDRQSVHQICSGQVVLTLATAVKELVENSIDAGATNVDIKLKDSGTELVEVSDNGK 99
Query: 71 GISPNNFK 78
G+ NF+
Sbjct: 100 GVEEANFE 107
>gi|444724302|gb|ELW64912.1| Mismatch repair endonuclease PMS2 [Tupaia chinensis]
Length = 1411
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 107/193 (55%), Gaps = 17/193 (8%)
Query: 79 VRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP 138
+ V + AY +I++G+R CTN G+ + V+ T G SS+K+NI +VFG L P
Sbjct: 210 AKMVQVLHAYCIISEGIRVSCTNQLGQGKRQPVVCTNGGSSIKENIGSVFGQKQLQSLIP 269
Query: 139 V-------AICKSD--SC--------KVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPK 181
+IC+ SC + GF+S+ G G GR+ DRQ+FF+N RP D K
Sbjct: 270 FVQLPPSDSICEEYGLSCFDALHNLFHISGFISRCGHGVGRSSTDRQFFFINRRPCDPAK 329
Query: 182 VSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQE 241
VS+LVNE+Y N QYP ++N V + D+NVTPDKR++ +E +L L+ L
Sbjct: 330 VSRLVNEVYHMYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLIG 389
Query: 242 IYSPNNASYSVNK 254
++ + SVN+
Sbjct: 390 MFDSDVNKLSVNQ 402
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 89/247 (36%), Positives = 113/247 (45%), Gaps = 78/247 (31%)
Query: 543 TLQFSIQDLRKRRQQRLSIMQSSCHTSGSVKMRRCFAAATLELSQPENEERKARALAAAT 602
TL FS+ L KR +Q Q S K R ++ EN+ AA
Sbjct: 647 TLDFSMSSLAKRIKQLHHQEQQSEDKQNYRKFR-------AKICPGENQ--------AAE 691
Query: 603 TELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQ 662
EL + K F M++IGQFNLGFII KL++D+FIVDQHA DEKYNFE L Q TVL Q
Sbjct: 692 DELRKEISKTMFAEMEIIGQFNLGFIITKLNEDIFIVDQHATDEKYNFEVLQQHTVLQGQ 751
Query: 663 PLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVE 722
L+ +K TFG +
Sbjct: 752 RLI------------------------------------------------AKNWTFGPQ 763
Query: 723 DVKDLISTLADNQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGRNEM 781
D+ +LI L+D+ G +C PSRVR M ASRACR S+MIG AL NEM
Sbjct: 764 DIDELIFMLSDSPG--------------VMCRPSRVRQMFASRACRKSVMIGTALNTNEM 809
Query: 782 QKILEHL 788
+K++ H+
Sbjct: 810 KKLITHM 816
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/67 (61%), Positives = 56/67 (83%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+PI++ VH+IC+GQV+ LS+AVKELVENSLDAGATSI++ LK+YG ++ +V DNGCG
Sbjct: 43 IKPIDRKSVHQICSGQVVLSLSTAVKELVENSLDAGATSIDLRLKDYGVDFIEVSDNGCG 102
Query: 72 ISPNNFK 78
+ NF+
Sbjct: 103 VEEENFE 109
>gi|342183724|emb|CCC93204.1| mismatch repair protein [Trypanosoma congolense IL3000]
Length = 787
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/221 (33%), Positives = 120/221 (54%), Gaps = 20/221 (9%)
Query: 595 ARALAAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLS 654
++ L + EL+ K F M V GQFN GFI+ L ++F++DQHAADEK+N+E L
Sbjct: 575 SKLLEQSEKELKLHLDKCSFKDMVVHGQFNHGFIVTSLGDNIFVIDQHAADEKFNYENLM 634
Query: 655 QSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLE--EDPHALAGLRFRLKAVP 712
V QPL+ P+ + + P+ +A + D ++++GF + ED + R + +VP
Sbjct: 635 SRYVAKPQPLISPVAVPMEPQTVDLAIDNSDELQRHGFIVRRGEDDN-----RLLVHSVP 689
Query: 713 FSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMI 772
DV +L++ L + Y + C V +A++ACRSSIMI
Sbjct: 690 VLPYEVVKPHDVMELLNQL----------TLYGVINRPMRC---VWHSMATKACRSSIMI 736
Query: 773 GDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTI 813
G L M+ ++ L++L PWNCPHGRPT+RH+ ++++
Sbjct: 737 GTVLSEKTMRSVVSRLSELEQPWNCPHGRPTLRHIARISSL 777
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 42/61 (68%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
+R ++ ++ AGQVI +LSS +KELVENSLDAGA ++ I +++YG V D+G G
Sbjct: 16 MRRLDGESARKLSAGQVITNLSSVIKELVENSLDAGACNLAIFIEDYGVGCITVDDDGRG 75
Query: 72 I 72
+
Sbjct: 76 M 76
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 87/184 (47%), Gaps = 26/184 (14%)
Query: 81 AVFLCQAYALIAKGVRFVCTN-TTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
A L + YAL VR + T+ T ++ ++ G++ + + +G + L +
Sbjct: 203 ATTLVKQYALSHPHVRLLMTHRVTPESAPVTLVSLTGTNDPQRALAEAYGGRV---LAGM 259
Query: 140 AICKSDSC--KVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYK----GA 193
+ + C + G++SK G GR D Q F ++ R VDLP ++K +++ Y A
Sbjct: 260 VRVEWEVCFGTIIGYVSK--VGGGRVTTDMQVFALDGRLVDLPAIAKAISDAYGECLPNA 317
Query: 194 NSRQYPIAIMNFI----VPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNAS 249
R +P ++ VP DVN+ P KRKV ++E + HA +E++S S
Sbjct: 318 AQRVFPAFFLHVHTGDDVPY---DVNLVPSKRKVLMAEE--MRHA-----EEVHSCALRS 367
Query: 250 YSVN 253
+ V+
Sbjct: 368 FQVS 371
>gi|397526164|ref|XP_003833006.1| PREDICTED: LOW QUALITY PROTEIN: mismatch repair endonuclease PMS2
[Pan paniscus]
Length = 977
Score = 130 bits (326), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 102/321 (31%), Positives = 142/321 (44%), Gaps = 92/321 (28%)
Query: 501 IVSSSNDLKKNSEDLSVAASHLQFSGSILDAPVPSSSLDICSTLQFSIQDLRKRRQQRLS 560
I+SSS+ +K V+AS + + I VP L FS+ L KR +Q
Sbjct: 744 ILSSSDICQKLVNTQDVSASQVDVAVKINKKVVP---------LDFSMSSLAKRIKQ--- 791
Query: 561 IMQSSCHTSGSVKMRRCFAAATLELSQPENEERKARALAAATTELERLFRKEDFGRMKVI 620
+ + + G R+ A ++ EN+ AA EL + K F M++I
Sbjct: 792 LHHEAQQSEGEQNYRKFRA----KICPGENQ--------AAEDELRKEISKTMFAEMEII 839
Query: 621 GQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVA 680
GQFNLGFII KL++D+FIVDQHA DEKYNFE L Q TVL Q L+
Sbjct: 840 GQFNLGFIITKLNEDIFIVDQHATDEKYNFEMLQQHTVLQGQRLI--------------- 884
Query: 681 SMHMDIIRKNGFSLEEDPHALAGLR-----FRLKAVPFSKKITFGVEDVKDLISTLADNQ 735
P AG R FRL + P ++ T G E +
Sbjct: 885 ----------------APQGAAGRRKVTLGFRLVSSPSCQR-THGREAAGPGL------- 920
Query: 736 GECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPW 795
EC S+ + +MIG AL +EM+K++ H+ +++ PW
Sbjct: 921 -ECYGQQSH-----------------------TQVMIGTALNTSEMKKLITHMGEMDHPW 956
Query: 796 NCPHGRPTMRHLVDLTTIRKN 816
NCPHGRPTMRH+ +L +N
Sbjct: 957 NCPHGRPTMRHIANLGVTSQN 977
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/182 (36%), Positives = 100/182 (54%), Gaps = 17/182 (9%)
Query: 79 VRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP 138
+ V + AY +I+ G+R CTN G+ + V+ T GS ++K+NI +VFG L P
Sbjct: 342 AKMVQVLHAYCVISAGIRVSCTNQLGQGKRQPVVCTGGSPNIKENIGSVFGQKQLQSLIP 401
Query: 139 -VAICKSDS-CK---------------VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPK 181
V + SDS C+ + GF+S+ G GR+ DRQ+FF+N RP D K
Sbjct: 402 FVQLPPSDSVCEEYGLSCSDALHNLFYISGFISQCTHGVGRSSTDRQFFFINRRPCDPAK 461
Query: 182 VSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQE 241
V +LVNE+Y N QYP ++N V + D+NVTPDKR++ +E +L L+ L
Sbjct: 462 VCRLVNEVYHMYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLIG 521
Query: 242 IY 243
++
Sbjct: 522 MF 523
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 55/67 (82%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+PI++ VH+IC+GQV+ LS+AVKELVENSLDAGAT+I++ LK+YG + +V DNGCG
Sbjct: 175 IKPIDRKSVHQICSGQVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSDNGCG 234
Query: 72 ISPNNFK 78
+ NF+
Sbjct: 235 VEEENFE 241
>gi|409074472|gb|EKM74869.1| hypothetical protein AGABI1DRAFT_19077, partial [Agaricus bisporus
var. burnettii JB137-S8]
Length = 925
Score = 129 bits (325), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 73/159 (45%), Positives = 97/159 (61%), Gaps = 17/159 (10%)
Query: 585 LSQPENEERKARALAAATTELERLFRKEDFGRMKVIGQFNLGFIIG---KLDQ------- 634
LS NE++ A L+ R+ K DF M+++GQFN GFII KLD
Sbjct: 766 LSNTNNEDKAAEVLS-------RIIDKSDFSEMELVGQFNHGFIITRRRKLDSSSSGVMD 818
Query: 635 DLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSL 694
DLFIVDQHAADEKYNFE L Q+T + Q L R L+LT EE+VA+ ++DI+RKNGF +
Sbjct: 819 DLFIVDQHAADEKYNFETLQQTTNIQSQTLFRSRPLELTASEELVATENIDILRKNGFEV 878
Query: 695 EEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
+ + AL G R L A P SK F +D+++LI+ + D
Sbjct: 879 DVNETALPGNRLILTAQPVSKSTVFDTKDLEELINLMQD 917
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 108/229 (47%), Gaps = 44/229 (19%)
Query: 80 RAVFLCQAYAL----IAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGM----N 131
+A+ L AYAL + G+R +N K KS VL TQG+ S++ ++ T++G N
Sbjct: 169 KALGLLNAYALLPCTVEPGIRLNVSNQPDKGAKSQVLTTQGTPSMRASVSTLWGPKALDN 228
Query: 132 IYNC---LE---------------PVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVN 173
+ + LE P+ + +V G +SK GR DRQ+F+VN
Sbjct: 229 VVDLDLRLEVERERGNKRTISQALPLTDDEPLQIRVRGLISKFSVSCGRTGTDRQFFYVN 288
Query: 174 DRPVDLPKVSKLVNELYKGANSRQYPIAIMNFIVPT-----------------RACDVNV 216
RP L KV K NE+Y+ N Q + +F++PT ACDVNV
Sbjct: 289 GRPCTLNKVQKAFNEVYRSFNPNQSAFIVADFVIPTGVLSAEKNCSAHLMTYSAACDVNV 348
Query: 217 TPDKRKVFFSDECSILHALREGLQ-EIYSPNNASYSVNKVEQLIEPEKS 264
+PDKR +F E +++ AL+ L + +YS +E+ PE+S
Sbjct: 349 SPDKRTIFLHSESNLIAALKVCLGLYCFGRRLTTYSQAALERNFNPERS 397
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 53/68 (77%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+PI+K VHRI +GQV+ D+ +AVKEL+ENSLDAGATSI++ K+YG +VVDNG G
Sbjct: 1 IKPIDKTSVHRITSGQVVIDIQTAVKELIENSLDAGATSIDVRFKQYGLTSIEVVDNGSG 60
Query: 72 ISPNNFKV 79
I+ + +V
Sbjct: 61 IAEKDHEV 68
>gi|159468113|ref|XP_001692227.1| hypothetical protein CHLREDRAFT_101121 [Chlamydomonas reinhardtii]
gi|158278413|gb|EDP04177.1| predicted protein [Chlamydomonas reinhardtii]
Length = 193
Score = 129 bits (323), Expect = 8e-27, Method: Composition-based stats.
Identities = 80/193 (41%), Positives = 109/193 (56%), Gaps = 17/193 (8%)
Query: 618 KVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEE 677
+V+GQFNLGFI+ +D+FIVDQHAADEK FERL +S L +QPLL P+ L
Sbjct: 2 QVLGQFNLGFILAAHGRDVFIVDQHAADEKTTFERLQRSVALTRQPLLAPMPLPPGLLLP 61
Query: 678 VVASM---HMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADN 734
+ + H+D+ R+NGF ++ P + ++ A
Sbjct: 62 LDQLLIREHIDVFRRNGFDF-------------VQRTP-AGRLVPVPSPAPAPAPAPAPL 107
Query: 735 QGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSP 794
I S ++ + RVRAMLASRACRSSIM+G L R +M+++L+ LA+L P
Sbjct: 108 SLAFVIYSPVRVRSPPPNPDPRVRAMLASRACRSSIMVGRPLDRPQMRRVLDRLAELRQP 167
Query: 795 WNCPHGRPTMRHL 807
WNCPHGRPTMRH+
Sbjct: 168 WNCPHGRPTMRHV 180
>gi|340960378|gb|EGS21559.1| DNA mismatch repair protein pms1-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 1018
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 102/198 (51%), Gaps = 19/198 (9%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
+ + L YA I GV+F T K + V+ T+G+S+ ++NII VFG+ N L P+
Sbjct: 176 KVINLLNQYACIQTGVKFTVTQQPTKGKRMVMFSTKGNSTTRENIINVFGVKTMNALVPM 235
Query: 140 AIC-------------------KSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLP 180
+ KS +V G +S+P G GR+ DRQ F+VN RP LP
Sbjct: 236 DLTLELIPTAGPLTKGKARTDRKSTEVRVVGHISRPTHGEGRSTPDRQMFYVNGRPCGLP 295
Query: 181 KVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQ 240
+ +K+ NE+Y+ NS Q P + + T DVNV+PDKR + D+ +L LRE L
Sbjct: 296 QFAKVFNEVYRLYNSSQSPFIFADIQLDTHLYDVNVSPDKRTILLHDQGQMLDNLRESLI 355
Query: 241 EIYSPNNASYSVNKVEQL 258
E++ + +++V L
Sbjct: 356 ELFETQDVIIPMSRVAAL 373
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 108/205 (52%), Gaps = 42/205 (20%)
Query: 553 KRRQQRLS--IMQSSCHTSGSVKMRRCFAAATLELSQPENEERKARALAAATTELERLFR 610
+RR + LS + Q +C T+ V++ E+E+ +A+ L
Sbjct: 814 RRRIEYLSSRLPQEACQTTAGVRLESI-----------ESEDAEAK--------LSLKIS 854
Query: 611 KEDFGRMKVIGQFNLGFIIG-------------------KLDQDLFIVDQHAADEKYNFE 651
K DF +M+++GQFNLGFI+ K D +LFI+DQHA+DEKYNFE
Sbjct: 855 KSDFTKMRIVGQFNLGFILAVREAVSASSSTSCSRDSGTKDDDELFIIDQHASDEKYNFE 914
Query: 652 RLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALA--GLRFRLK 709
RL +T + Q L++P L LT EE + ++ + +NGFS+ D + G R +L
Sbjct: 915 RLQATTTVQSQRLVQPKTLSLTALEEEIILANLPALERNGFSVSVDTSGASPVGSRIQLL 974
Query: 710 AVPFSKKITFGVEDVKDLISTLADN 734
+P S++ TF + D+++LI LADN
Sbjct: 975 TLPLSRETTFSIADLEELIFLLADN 999
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 54/75 (72%)
Query: 8 NSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVD 67
+S TI+ I+ +H+I +GQVI DL S KELVENS+DAGAT+IE+ K G + +V D
Sbjct: 3 SSATIKAIDSNTIHQIQSGQVIVDLCSVAKELVENSIDAGATAIEVRFKNQGLDSIEVQD 62
Query: 68 NGCGISPNNFKVRAV 82
NG GI+P+N++ A+
Sbjct: 63 NGSGIAPHNYETVAL 77
>gi|399216164|emb|CCF72852.1| unnamed protein product [Babesia microti strain RI]
Length = 763
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/213 (36%), Positives = 110/213 (51%), Gaps = 26/213 (12%)
Query: 611 KEDFGRMKVIGQFNLGFIIGKL---------DQDLFIVDQHAADEKYNFERLSQSTVLNQ 661
K F M++ GQFN GFII KL LFI+DQHAADEK FE L++ +N
Sbjct: 537 KRTFKMMEICGQFNKGFIITKLASYDRNDKFKYSLFIIDQHAADEKARFETLNKRVKINC 596
Query: 662 QPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSL-EEDPHALAGLRFRLKAVPFSKKITFG 720
Q L++P+ + + P V ++ NGF++ H L F V FS G
Sbjct: 597 QKLIQPVFVKVPPSHLAVGDRSYSVLECNGFTMCGSSDHGLYIATF---PVLFSH--VLG 651
Query: 721 VEDVKDLISTLA--------DNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMI 772
D + + + D G S + Y T P ++ ++LA+RACRS++ I
Sbjct: 652 ENDFLEFLEKIYSFNAIYGKDLNGTSSHVWDYFQSTPR---PPKIWSILANRACRSAVKI 708
Query: 773 GDALGRNEMQKILEHLADLNSPWNCPHGRPTMR 805
GD L R +M++I + L DL+ PWNCPHGRPT++
Sbjct: 709 GDDLNRGKMEQIKDTLGDLDHPWNCPHGRPTIK 741
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 40/56 (71%)
Query: 27 QVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFKVRAV 82
Q++ D+S VKEL+EN+LDA AT I+++L + G E +V DNG GI +F++ A+
Sbjct: 34 QLLVDVSCVVKELLENALDASATEIDVSLVDGGCESIEVKDNGTGIREEDFELLAI 89
Score = 39.3 bits (90), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 61/150 (40%), Gaps = 13/150 (8%)
Query: 81 AVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGS--------SSLKDNIITVFGMNI 132
V + Q YAL +R TN +++ + G +S++D ++G +
Sbjct: 189 TVDMVQQYALFYPSIRITLTNKPTNGKTTILFSSPGGLSVHSGNYTSIRDITSFIYGKKL 248
Query: 133 YNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPK-VSKLVNELYK 191
+ D ++ G +S + Q FVN RPV K + + Y+
Sbjct: 249 IQKMNEWGY-TCDEFEISGLISDLDSEFNPPI---QILFVNGRPVTSQKSICHAILNAYR 304
Query: 192 GANSRQYPIAIMNFIVPTRACDVNVTPDKR 221
+++ P I+N + + DVN +PDKR
Sbjct: 305 QYSNKARPSFILNLTLNLQEIDVNCSPDKR 334
>gi|440492051|gb|ELQ74651.1| DNA mismatch repair protein - MLH2/PMS1/Pms2 family
[Trachipleistophora hominis]
Length = 609
Score = 127 bits (318), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 76/210 (36%), Positives = 111/210 (52%), Gaps = 41/210 (19%)
Query: 610 RKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLK 669
+K D +K+IGQFN GFI+ L+ L I DQHA DE YNFE + + N+Q LL+P+
Sbjct: 432 QKSDLKNVKIIGQFNQGFILATLNGYLMIFDQHAVDEIYNFEMIKKGIKFNKQSLLKPIS 491
Query: 670 L---------DLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFG 720
L DL+ + +M + R F +++D ++ A P K F
Sbjct: 492 LPSDSMLMSDDLSSPNRLDQAMLSSLNR--SFEVKDD---------KITASPSFNKHLFN 540
Query: 721 VEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNE 780
+ D ++L+ST GE S +++ +AS+ACR SIMIGD L
Sbjct: 541 INDYRELVST-----GEVSSLTN----------------KIASKACRMSIMIGDKLNLCT 579
Query: 781 MQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
M +I+ +L++L++PWNCPHGRPT R L L
Sbjct: 580 MNRIIYNLSELDNPWNCPHGRPTFRVLYKL 609
>gi|378756045|gb|EHY66070.1| hypothetical protein NERG_00766 [Nematocida sp. 1 ERTm2]
Length = 619
Score = 125 bits (314), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 111/197 (56%), Gaps = 20/197 (10%)
Query: 612 EDFGRMKVIGQFNLGFIIGKLDQD----LFIVDQHAADEKYNFERLSQSTVLNQQPLLRP 667
++ +K++GQFN GFI+ L +D ++I+DQHAADE N+E L + V +Q L+ P
Sbjct: 429 QEISMLKIVGQFNNGFILCTLVKDSNIHMYIIDQHAADEAVNYEYLRSTIVYKRQKLIHP 488
Query: 668 LKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDL 727
+ + ++ + + + I K+GF L E+ + ++ P + FG +++ ++
Sbjct: 489 IAIGISEYDAHLLRENTRCIEKHGFILNEE-------KTQIIEAPAYENTIFGSQELLEI 541
Query: 728 ISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEH 787
+ + + + + + + + +R +LAS+ACRSSIMIGD L +M KI++
Sbjct: 542 VERIKEGRFK---------EEEPVIVFTSLRKVLASKACRSSIMIGDVLNMQQMNKIVKG 592
Query: 788 LADLNSPWNCPHGRPTM 804
L+ PWNCPHGRPT+
Sbjct: 593 LSKTTRPWNCPHGRPTI 609
>gi|403222966|dbj|BAM41097.1| DNA mismatch repair protein [Theileria orientalis strain Shintoku]
Length = 734
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/225 (34%), Positives = 118/225 (52%), Gaps = 32/225 (14%)
Query: 614 FGRMKVIGQFNLGFIIGKLD---------QDLFIVDQHAADEKYNFERLSQSTVLNQQPL 664
F MK++GQFN FII KL+ ++I+DQHAADEK FE L++S +N+Q L
Sbjct: 499 FRNMKLVGQFNNSFIITKLNFPGVNSEFNYSIYIIDQHAADEKAKFENLNKSVKINKQRL 558
Query: 665 LRPLKLDLTPEEEVVASMHMDIIRKNGFS----------LEEDP----------HALAGL 704
+ P ++L+P VA H+D++ NGF + DP H G+
Sbjct: 559 INPKLIELSPFLTQVAEQHLDLLILNGFDTTISKETELVMYNDPEIKMSVGSQDHMAKGI 618
Query: 705 RFRLKAVPFSKKITFGVEDVKDLISTLADNQG-ECSIISSYKMDTADSVCPSRVRAMLAS 763
+ P +D+ D I+ L+ + E + + Y T P +V +LAS
Sbjct: 619 Y--VHTYPQVLGRVLEEDDLIDFINQLSSTEEVEKANSNEYIWGTGSIPRPQKVWNILAS 676
Query: 764 RACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLV 808
RAC+SSI +GD L +M+ ++ +L+ L PWNCPHGRP+++ L+
Sbjct: 677 RACKSSIRLGDPLSNVQMKTVIRNLSLLIHPWNCPHGRPSIKCLI 721
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 86/176 (48%), Gaps = 10/176 (5%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSS-SLKDNIITVFGMNIYNCLEP 138
+AV Q Y+LI + F T+ + N S + T GS+ +++ + +FG + + L
Sbjct: 172 KAVSQIQQYSLINPNIGFKFTSVSN-NTISTLFSTSGSNENIRSVVEQIFGQDFASKLID 230
Query: 139 VAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNEL---YKGANS 195
+ + ++EG +S P G D +YF++N RP+ K +K N + + +S
Sbjct: 231 FYMA-DNRWRIEGLISSPYVERGSR--DLEYFYINKRPI--AKTTKFKNSIAAVFSHFSS 285
Query: 196 RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASYS 251
R P I+N + D+N++PDKR F E I+ A + L EI P N S S
Sbjct: 286 RPRPSFILNLTIDYDKVDINLSPDKRSAFLLSEDYIIRAFKNKLYEILKPKNFSSS 341
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 37/55 (67%)
Query: 27 QVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFKVRA 81
QVI ++ ++ELVENS+DA +T IEI + G + QV DNG GI ++F++ A
Sbjct: 18 QVINSINCVIRELVENSIDALSTQIEIKVYNGGADLIQVSDNGSGILESDFELLA 72
>gi|71027751|ref|XP_763519.1| DNA mismatch repair protein PMS1 [Theileria parva strain Muguga]
gi|68350472|gb|EAN31236.1| DNA mismatch repair protein PMS1, putative [Theileria parva]
Length = 791
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 75/223 (33%), Positives = 117/223 (52%), Gaps = 28/223 (12%)
Query: 614 FGRMKVIGQFNLGFIIGKL---------DQDLFIVDQHAADEKYNFERLSQSTVLNQQPL 664
F M++IGQFN FII KL + L+++DQHAADEK FERL+++ +N+Q L
Sbjct: 557 FDEMELIGQFNKSFIITKLTFPEVKSKYNFSLYVIDQHAADEKARFERLNKTVKINKQRL 616
Query: 665 LRPLKLDLTPEEEVVASMHMDIIRKNGFSL------------EEDPHALA------GLRF 706
+ P ++L+P VA M+++ NGF + +ED + G
Sbjct: 617 IYPKLIELSPFLTQVAENSMNVLLSNGFDVRVCREKEFLVFNDEDLSMTSAYTEKIGRGV 676
Query: 707 RLKAVPFSKKITFGVEDVKDLISTL-ADNQGECSIISSYKMDTADSVCPSRVRAMLASRA 765
+ +P G +D D ++ L A E S S + ++ P ++ ++LASRA
Sbjct: 677 YVHTLPQILGKVLGEDDFVDFLNELSATEYVENSKQSEFIWGLGNTPRPHKIWSILASRA 736
Query: 766 CRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLV 808
C+SS+ GD L +M+ I+ + L PWNCPHGRP+++ LV
Sbjct: 737 CKSSVRAGDGLTNGQMKNIVRRMGTLIHPWNCPHGRPSIKCLV 779
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 82/186 (44%), Gaps = 20/186 (10%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDN----IITVFGMNIYNC 135
++V Q YALI + F T T S + T GS KDN I +FG
Sbjct: 172 KSVSQIQQYALINPHISFNFTTVTNNKKFSNIFATSGS---KDNVRGVIEEIFGHEFAKK 228
Query: 136 LEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVD-LPKVSKLVNELYKGAN 194
L + I K ++EG +S P G + +YF++N RP+ + K ++ ++ +
Sbjct: 229 LVQINI-KDKEWRIEGLVSNPYNERGYR--EMEYFYINKRPISKVQKFKNAISAIFSHFS 285
Query: 195 SRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALR---------EGLQEIYSP 245
S+ P I+N + DVN++PDKR + E I+ + E L EI P
Sbjct: 286 SKSKPSFILNLTMNYDHIDVNISPDKRSAYIYSEDYIIRTFKVSFYAILLIENLYEILKP 345
Query: 246 NNASYS 251
++ S
Sbjct: 346 KTSNLS 351
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 35/51 (68%)
Query: 27 QVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNF 77
QVI +S ++ELVEN++DA AT+IEI + G + +V DNG GIS NF
Sbjct: 18 QVITGISCVIRELVENAIDAQATNIEIKIYNGGADLIKVADNGTGISEINF 68
>gi|441649831|ref|XP_004090979.1| PREDICTED: mismatch repair endonuclease PMS2-like [Nomascus
leucogenys]
Length = 669
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/178 (38%), Positives = 99/178 (55%), Gaps = 17/178 (9%)
Query: 79 VRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP 138
+ V + AY +I+ G+R CTN G+ + V+ T GS S+K+NI +VFG L P
Sbjct: 182 AKMVQVLNAYCIISAGIRVSCTNQLGQGKRQPVVCTGGSPSIKENIGSVFGQKQLQSLIP 241
Query: 139 -VAICKSDS-CK---------------VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPK 181
V + SDS C+ + GF+S+ G GR+ DRQ+FF+N RP D K
Sbjct: 242 FVQLPPSDSVCEEYGLSCSDALHNLFYISGFISQCTHGVGRSSTDRQFFFINRRPCDPAK 301
Query: 182 VSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGL 239
VS+LVNE+Y N QYP ++N V + D+NVTPDKR++ +E +L L+ L
Sbjct: 302 VSRLVNEVYHMYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSL 359
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 55/67 (82%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+PI++ VH+IC+GQV+ LS+AVKELVENSLDAGAT+I++ LK+YG + +V DNGCG
Sbjct: 15 IKPIDRKSVHQICSGQVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSDNGCG 74
Query: 72 ISPNNFK 78
+ NF+
Sbjct: 75 VEEENFE 81
>gi|443691436|gb|ELT93291.1| hypothetical protein CAPTEDRAFT_202090, partial [Capitella teleta]
Length = 134
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 71/163 (43%), Positives = 95/163 (58%), Gaps = 38/163 (23%)
Query: 623 FNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASM 682
FNLGF+I +L+QDLFI+DQHA+DEKYNFE L + TVL+ Q L+ P L LT EV+
Sbjct: 1 FNLGFVIARLNQDLFIIDQHASDEKYNFEMLQKHTVLSSQRLVCPQILPLTAANEVILMD 60
Query: 683 HMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIIS 742
++DI ++NGF+ E D ED+++L+ L+D+ G
Sbjct: 61 NLDIFKRNGFAFEVDE-----------------------EDIEELVFMLSDSSG------ 91
Query: 743 SYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGRNEMQKI 784
+C P+RVR MLASRACR SIMIG AL + EM K+
Sbjct: 92 --------IMCRPTRVRQMLASRACRKSIMIGTALNQPEMNKV 126
>gi|428671756|gb|EKX72671.1| DNA mismatch repair protein, putative [Babesia equi]
Length = 757
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/240 (33%), Positives = 124/240 (51%), Gaps = 25/240 (10%)
Query: 589 ENEERKARALAAATTELERLFRKEDFGRMKVIGQFNLGFIIGKL---------DQDLFIV 639
+N+E A + + L F MK+ GQFN GFII L D ++I+
Sbjct: 511 DNDESTASDAQTDSIDDHDLMDPSVFKEMKLCGQFNNGFIITILKDSKIRQGFDYSIYII 570
Query: 640 DQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGF-SLEEDP 698
DQHAADEK FE +Q + +Q L+ P ++L+P VA H D + NGF ++ +
Sbjct: 571 DQHAADEKARFEDYNQRVKIKKQKLISPRFIELSPYLSQVAQSHCDTLNYNGFETVTKSA 630
Query: 699 HALAGLRFRLKAVP--FSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVC--- 753
+ + + P F + ++ ED DLIS L D + I K + +
Sbjct: 631 PNRSSHGIYVNSFPQLFGRILS---ED--DLISFLNDLSNSVATIQDEKQISKQLIWGNS 685
Query: 754 -----PSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLV 808
P ++ ++LA+RAC+ +I +GDAL ++M+ I++ L+ L PWNCPHGRPTM+ L+
Sbjct: 686 IILPRPIKIWSILATRACKDAIKLGDALSTDKMRSIIKKLSTLVHPWNCPHGRPTMKCLI 745
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 97/187 (51%), Gaps = 10/187 (5%)
Query: 81 AVFLCQAYALIAKGVRFVCTN--TTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP 138
+FL Q YAL+ +RF +N T+ +N+ ++ + + ++K +FG L
Sbjct: 173 GIFLLQQYALVNPHIRFYLSNKTTSNQNISNLFSTSGKAENMKQVAEEIFGKTFVANLIE 232
Query: 139 VAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLP-KVSKLVNELYKGANSRQ 197
V I D + G +S P +G+ D ++FF+N+RPVD K+ + +YK +SR
Sbjct: 233 VDISTRD-WNLRGMISSPH--NGKQYKDVEFFFINNRPVDNSRKLRSCIVGVYKQFSSRL 289
Query: 198 YPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNA----SYSVN 253
YP I+N + D+N+ PDKR VF E I++ L+ L E++ P + ++V+
Sbjct: 290 YPSFILNLSTDSVNVDINLAPDKRSVFIYSEDIIINKLKAMLFELFMPTRSQTIPQFNVD 349
Query: 254 KVEQLIE 260
++Q +
Sbjct: 350 ILDQFLH 356
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 40/55 (72%)
Query: 27 QVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFKVRA 81
QVI +++ ++ELVENS+DA ATSIEI L G + QV DNG GIS +NF++ A
Sbjct: 18 QVINNVNCVIRELVENSIDAKATSIEIRLTNSGHDLIQVSDNGTGISESNFEILA 72
>gi|403417453|emb|CCM04153.1| predicted protein [Fibroporia radiculosa]
Length = 1123
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/193 (38%), Positives = 108/193 (55%), Gaps = 23/193 (11%)
Query: 564 SSCHTSGSVKMRRCF--AAATLELSQPENEERKARALAAATTELERLFRKEDFGRMKVIG 621
S + +V R C AAT+E ++ + +A +A L R+ K DF M ++G
Sbjct: 858 SQSSPAAAVAERVCSQSVAATIEKTKADAGVTRAADDSAVAEALARVIDKTDFAVMDIVG 917
Query: 622 QFNLGFIIGKL-------------------DQDLFIVDQHAADEKYNFERLSQSTVLNQQ 662
QFNLGFI+ + D DLFIVDQHAADEKYNFE L Q+TV+ Q
Sbjct: 918 QFNLGFIVVRRQRRTDADDSTRQNGLDKIDDDDLFIVDQHAADEKYNFETLQQTTVIKSQ 977
Query: 663 PLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAG--LRFRLKAVPFSKKITFG 720
L RPL L+LT +E++A +++++++NGF +E P G R +L A P SK+ F
Sbjct: 978 RLFRPLPLELTAADELLARENVNVLKQNGFEVELSPDDGCGGARRLQLIAQPTSKETVFD 1037
Query: 721 VEDVKDLISTLAD 733
V+D+++L+ L D
Sbjct: 1038 VKDLEELLHLLQD 1050
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 101/214 (47%), Gaps = 42/214 (19%)
Query: 80 RAVFLCQAYALIA-----KGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFG----- 129
+A+ L AYAL+ GVR T+ TG KSV ++T G+ S++ ++ ++G
Sbjct: 201 KALTLLSAYALVPCAQENHGVRLTVTHQTGNGKKSVQMRTDGAPSMRASVSALWGPKALE 260
Query: 130 ---------------------------MNIYNCLEPVAIC--KSDSCKVEGFLSKP-GQG 159
+ L + C S+ V+G P +
Sbjct: 261 HLVELDFNFDVETERAVLRRRGVIDADGQVLKLLTWLDRCMLTSERVGVQGVEHGPCARA 320
Query: 160 SGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPD 219
G +FFVN RP + KV K NE+Y+ N+ Q P + NF +PT +CDVNV+PD
Sbjct: 321 DISVFGG--FFFVNGRPCNPSKVQKAFNEVYRTFNATQSPFIVANFNLPTESCDVNVSPD 378
Query: 220 KRKVFFSDECSILHALREGLQEIYSPNNASYSVN 253
KR + E +++ AL+ L++ ++P+ A+Y V+
Sbjct: 379 KRTILLHSENNLVQALKAALEQKFAPSRATYDVS 412
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 55/75 (73%), Gaps = 3/75 (4%)
Query: 6 PTNS---PTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEW 62
PTN+ +I+ ++ VHRI +GQV+ DL +AVKELVENSLDA ATSIE+ KEYG
Sbjct: 21 PTNAGPAQSIKALDTTSVHRIASGQVVIDLQTAVKELVENSLDAKATSIEVRFKEYGLAA 80
Query: 63 FQVVDNGCGISPNNF 77
+VVDNG GI+P ++
Sbjct: 81 IEVVDNGSGIAPGDY 95
>gi|145551871|ref|XP_001461612.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124429447|emb|CAK94239.1| unnamed protein product [Paramecium tetraurelia]
Length = 685
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/235 (32%), Positives = 122/235 (51%), Gaps = 33/235 (14%)
Query: 586 SQPENE----------ERKARALAAATTELERL-----FRKEDFGRMKVIGQFNLGFIIG 630
SQP NE ++K E E+L F KE F +++IGQFN GFII
Sbjct: 447 SQPNNEKIQLKINEVIQQKEEKQLFEADEFEQLSKQNHFLKEHFNNLQIIGQFNKGFIIC 506
Query: 631 KLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPE-EEVVASMHMDIIRK 689
+ ++ ++++DQHA DEKYN+ERL N+ L+ P+ L L+ E++ I K
Sbjct: 507 EHEEKIYVLDQHACDEKYNYERLINQLKFNRAQLIVPITLKLSGFLLELLIDNQQQINDK 566
Query: 690 NGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTA 749
+ +E + + ++K P I G + + ++ L+ QG+
Sbjct: 567 YKYQVEITENCV-----KVKTCPSYSNIQLGADTLLQILDQLS--QGK----------KL 609
Query: 750 DSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTM 804
D + +++ LAS+ACR+SIM+G L +M+ ++++L L SPWNCPHGRPT+
Sbjct: 610 DQIEIPQIKQKLASQACRTSIMVGSDLQAKQMENVVKNLTTLISPWNCPHGRPTL 664
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 85/180 (47%), Gaps = 10/180 (5%)
Query: 76 NFKV---RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQ-GSSSLKDNIITVFGMN 131
N+K+ +A+ + YA+I + F N KN K ++L + + ++K I V G +
Sbjct: 158 NYKIEYNKAINILTEYAIINTNIEFKIYNEEEKNKKKLILDSGLANQNMKQRITNVLGDS 217
Query: 132 IYNCLEPVAICKSDSCKVEGFLSKP---GQGSGRNLGDRQYFFVNDRPVDLPK-VSKLVN 187
I N L P D + GFLSK G G+N Y ++N +P++ PK V +++
Sbjct: 218 IANDLIPFEKISQDFTLI-GFLSKSIESGSYKGQNRKTFWYCYINKKPINPPKQVLQIMR 276
Query: 188 ELYKGANSRQYPIAIMNF-IVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPN 246
++Y+ N I+ + D NV+ DKR V+ +E IL + + + E N
Sbjct: 277 DIYRQHNPNGNFFFILEINLRQINDADFNVSVDKRDVYLKNEKLILENIEQIVTETLEKN 336
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 43/70 (61%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ +N+ + I ++ L+S VKEL+ENS+DA AT I + G+E F+V+DNG G
Sbjct: 2 IKQLNQESILHISTSSTLQSLASFVKELIENSIDAQATQIIVNFFNNGKEGFEVIDNGIG 61
Query: 72 ISPNNFKVRA 81
IS N K A
Sbjct: 62 ISTINQKQLA 71
>gi|195583624|ref|XP_002081617.1| GD25620 [Drosophila simulans]
gi|194193626|gb|EDX07202.1| GD25620 [Drosophila simulans]
Length = 138
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 64/140 (45%), Positives = 86/140 (61%), Gaps = 16/140 (11%)
Query: 683 HMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIIS 742
H+D+ KNGF E D A A + RL P SK+ FG ED+ +LI L D
Sbjct: 6 HIDVFEKNGFKFEVDHEAPATKKVRLLGKPHSKRWEFGKEDIDELIFMLQDA-------- 57
Query: 743 SYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGRNE-MQKILEHLADLNSPWNCPHG 800
++C PSRVRAM ASRACR S+MIG AL RN M++++ + ++ PWNCPHG
Sbjct: 58 -----PEGTICRPSRVRAMFASRACRKSVMIGTALSRNTTMRRLITQMGEIEQPWNCPHG 112
Query: 801 RPTMRHLVDLTTIRKNIDEN 820
RPTMRHL+++T + ++ DEN
Sbjct: 113 RPTMRHLINITMLIES-DEN 131
>gi|327179552|gb|AEA30123.1| mismatch repair protein [Pentatrichomonas hominis]
Length = 555
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/205 (33%), Positives = 110/205 (53%), Gaps = 21/205 (10%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLT 673
F M++IGQ+N FII +L D++ +DQHAA E NFE+L + T+ +Q LL+P L ++
Sbjct: 371 FKDMEIIGQWNRSFIITRLGCDIYAIDQHAACEAQNFEKLRKDTI-TKQTLLQPYILHVS 429
Query: 674 PEEEVVASMHMDIIRKNGFSLE-EDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLA 732
P E A + + + GF ED H + +P + GV+D+ +L+S L
Sbjct: 430 PAELESAEENREKCSEYGFDFTIEDDH------LSVTTIPAKITVASGVDDLLELLSILK 483
Query: 733 DNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLN 792
++ G + SS R L+ RAC SS+++GDA+ +M+ +L+ + +
Sbjct: 484 ESPGSQPMTSS-------------ARKALSYRACHSSVVVGDAMSNQQMKALLDRMGGSD 530
Query: 793 SPWNCPHGRPTMRHLVDLTTIRKNI 817
PWNCPHGRPT + L R+ +
Sbjct: 531 FPWNCPHGRPTWCQIWSLLEKRRYV 555
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%)
Query: 33 SSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFKV 79
S ++EL+ENSLDAGAT + I + G E+ V DNG GIS ++
Sbjct: 5 SHCLRELIENSLDAGATIVTIRVSGAGLEYISVSDNGPGISEEGLRM 51
>gi|119575457|gb|EAW55055.1| PMS2 postmeiotic segregation increased 2 (S. cerevisiae) [Homo
sapiens]
Length = 725
Score = 123 bits (309), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/178 (38%), Positives = 98/178 (55%), Gaps = 17/178 (9%)
Query: 79 VRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP 138
+ V + AY +I+ G+R CTN G+ + V+ T GS S+K+NI +VFG L P
Sbjct: 182 AKMVQVLHAYCIISAGIRVSCTNQLGQGKRQPVVCTGGSPSIKENIGSVFGQKQLQSLIP 241
Query: 139 -VAICKSDS-CK---------------VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPK 181
V + SDS C+ + GF+S+ G GR+ DRQ+FF+N RP D K
Sbjct: 242 FVQLPPSDSVCEEYGLSCSDALHNLFYISGFISQCTHGVGRSSTDRQFFFINRRPCDPAK 301
Query: 182 VSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGL 239
V +LVNE+Y N QYP ++N V + D+NVTPDKR++ +E +L L+ L
Sbjct: 302 VCRLVNEVYHMYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSL 359
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 55/67 (82%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+PI++ VH+IC+GQV+ LS+AVKELVENSLDAGAT+I++ LK+YG + +V DNGCG
Sbjct: 15 IKPIDRKSVHQICSGQVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSDNGCG 74
Query: 72 ISPNNFK 78
+ NF+
Sbjct: 75 VEEENFE 81
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 90/167 (53%), Gaps = 28/167 (16%)
Query: 501 IVSSSNDLKK--NSEDLSVAASHLQFSGSILDAPVPSSSLDICSTLQFSIQDLRKRRQQR 558
I+SSS+ +K N++D+S AS + + I VP L FS+ L KR +Q
Sbjct: 584 ILSSSDICQKLVNTQDMS--ASQVDVAVKINKKVVP---------LDFSMSSLAKRIKQ- 631
Query: 559 LSIMQSSCHTSGSVKMRRCFAAATLELSQPENEERKARALAAATTELERLFRKEDFGRMK 618
+ + + G R+ A ++ EN+ AA EL + K F M+
Sbjct: 632 --LHHEAQQSEGEQNYRKFRA----KICPGENQ--------AAEDELRKEISKTMFAEME 677
Query: 619 VIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLL 665
+IGQFNLGFII KL++D+FIVDQHA DEKYNFE L Q TVL Q L+
Sbjct: 678 IIGQFNLGFIITKLNEDIFIVDQHATDEKYNFEMLQQHTVLQGQRLI 724
>gi|58737033|dbj|BAD89425.1| postmeiotic segregation increased 2 nirs variant 1 [Homo sapiens]
Length = 572
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 100/182 (54%), Gaps = 17/182 (9%)
Query: 79 VRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP 138
+ V + AY +I+ G+R CTN G+ + V+ T GS S+K+NI +VFG L P
Sbjct: 182 AKMVQVLHAYCIISAGIRVSCTNQLGQGKRQPVVCTGGSPSIKENIGSVFGQKQLQSLIP 241
Query: 139 -VAICKSDS-CK---------------VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPK 181
V + SDS C+ + GF+S+ G GR+ DRQ+FF+N RP D K
Sbjct: 242 FVQLPPSDSVCEEYGLSCSDALHNLFYISGFISQCTHGVGRSSTDRQFFFINRRPCDPAK 301
Query: 182 VSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQE 241
V +LVNE+Y N QYP ++N V + D+NVTPDKR++ +E +L L+ L
Sbjct: 302 VCRLVNEVYHMYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLIG 361
Query: 242 IY 243
++
Sbjct: 362 MF 363
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 55/67 (82%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+PI++ VH+IC+GQV+ LS+AVKELVENSLDAGAT+I++ LK+YG + +V DNGCG
Sbjct: 15 IKPIDRKSVHQICSGQVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSDNGCG 74
Query: 72 ISPNNFK 78
+ NF+
Sbjct: 75 VEEENFE 81
>gi|164662239|ref|XP_001732241.1| hypothetical protein MGL_0016 [Malassezia globosa CBS 7966]
gi|159106144|gb|EDP45027.1| hypothetical protein MGL_0016 [Malassezia globosa CBS 7966]
Length = 844
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 60/126 (47%), Positives = 83/126 (65%), Gaps = 4/126 (3%)
Query: 601 ATTELERLFRKEDFGRMKVIGQFNLGFIIGKLD----QDLFIVDQHAADEKYNFERLSQS 656
A +ER+ K+DF M+V+GQFNLGFII + D DLFI+DQHAADEK+NFE L +
Sbjct: 714 AAAVMERVIPKKDFYTMRVVGQFNLGFIIARRDTPCMDDLFIIDQHAADEKHNFEDLERH 773
Query: 657 TVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKK 716
T + QPL+ P +++L P +E+VA H + + KNGF ++ D +A G R RL + P SK
Sbjct: 774 TKIYSQPLVVPQRIELAPTDELVAHEHREWLSKNGFDIDLDENAPPGSRVRLLSKPVSKG 833
Query: 717 ITFGVE 722
F V+
Sbjct: 834 TVFNVQ 839
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 106/180 (58%), Gaps = 7/180 (3%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKN----VKSVVLKT-QGSSSLKDNIITVFGMNIYN 134
+A + QAYALI++ +R+ + T N V ++L++ G + ++ N+ +FG
Sbjct: 179 KAHTMLQAYALISQNIRWASSIQTTVNGKPPVSQLMLRSATGPNYIQMNMAALFGKKAGA 238
Query: 135 CLEP--VAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKG 192
++ + + + G +SKP G GR+ GDRQYF++N RP + PK++++ N++YK
Sbjct: 239 AVQSFDLNVSLDEPAHFHGVMSKPTMGQGRSSGDRQYFYLNGRPWNCPKLAQICNQVYKM 298
Query: 193 ANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASYSV 252
NS QYP + N ++ T DVNV+PDKR ++ E ++ +RE L+ ++P++ ++V
Sbjct: 299 FNSTQYPCVVANLVIGTHTYDVNVSPDKRTLYVHQEAALFDRIREALEVTFNPSHGVFTV 358
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 47/70 (67%)
Query: 8 NSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVD 67
N+ I P++ V RI QV+ D+ +AVKEL+EN++DA AT+IE+ K+YG +V D
Sbjct: 5 NAARIAPLDLDDVRRISGAQVLPDMRAAVKELIENAMDAQATNIEVRFKDYGLTLIEVSD 64
Query: 68 NGCGISPNNF 77
NG GIS NF
Sbjct: 65 NGTGISKENF 74
>gi|154290225|ref|XP_001545711.1| hypothetical protein BC1G_15789 [Botryotinia fuckeliana B05.10]
Length = 780
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 82/255 (32%), Positives = 117/255 (45%), Gaps = 58/255 (22%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
TI+PI +H+I +GQVI DL S VKELVENSLDAGATS+++ K G E + V +
Sbjct: 3 TIKPIEGRTIHQIQSGQVIVDLCSVVKELVENSLDAGATSVDVRFKNQGLEAIE-VQDNG 61
Query: 71 GISPNNFKVRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGM 130
+ P T+G + + TQ KD
Sbjct: 62 ELEP---------------------------TSGPSQRR---STQNDGDTKD-------- 83
Query: 131 NIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELY 190
++ G +S+P G GR DRQ FFVN RP LP+V+K NE+Y
Sbjct: 84 ----------------IRIIGHISRPATGEGRQTPDRQMFFVNSRPCGLPQVAKAFNEVY 127
Query: 191 K---GANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNN 247
K G S Q P N + T DVNV+PDKR + D+ +L L+ L ++ +
Sbjct: 128 KSYNGWGSTQSPFIFANIELDTHLYDVNVSPDKRTILLHDQSRMLENLKTALAGLFEGQD 187
Query: 248 ASYSVNKVEQLIEPE 262
+ V+++ +P+
Sbjct: 188 HTIPVSQLLAQKQPQ 202
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 66/108 (61%), Gaps = 16/108 (14%)
Query: 606 ERL---FRKEDFGRMKVIGQFNLGFIIG-------------KLDQDLFIVDQHAADEKYN 649
ERL K DF +MK+IGQFNLGFI+ + ++FI+DQH++DEKYN
Sbjct: 668 ERLSLTISKSDFAKMKIIGQFNLGFILASKAPELTTENSGIQTADNVFIIDQHSSDEKYN 727
Query: 650 FERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEED 697
FERL +T++ Q L+ P L LT EE + + ++DI+ +NGF L D
Sbjct: 728 FERLQATTIVQSQRLVYPKTLSLTALEEEIVAENLDILEQNGFVLTID 775
>gi|156083705|ref|XP_001609336.1| DNA mismatch repair protein [Babesia bovis T2Bo]
gi|154796587|gb|EDO05768.1| DNA mismatch repair protein, putative [Babesia bovis]
Length = 883
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 121/219 (55%), Gaps = 24/219 (10%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQD----------LFIVDQHAADEKYNFERLSQSTVLNQQP 663
F RM+V GQFN GFII KL+ ++++D HAADEK FE+ + S + +QP
Sbjct: 654 FLRMQVCGQFNNGFIIAKLESKYSESNKVKYAVYLIDPHAADEKTKFEKYNSSVKIQRQP 713
Query: 664 LLRPLKLDLTPEEEVVASMHMDIIRKNGFS---LEEDPHALAGLR----FRLKAVPFSKK 716
L+ K+DL+P + V ++D++ +NGF+ + + + G L + P
Sbjct: 714 LVCERKVDLSPFHQQVVQANLDLLYENGFAATVVRQVVNDEGGYNREPGIYLSSFPQVLG 773
Query: 717 ITFGVED----VKDLISTLADNQGECSIISSYK-MDTADSVCP--SRVRAMLASRACRSS 769
G ED V DL + + +Q + + S+ + + A+++ P R+ +LA+RAC+ +
Sbjct: 774 QILGEEDFVSFVHDLAQSGSSSQPDPTNTSASQVLWGANTILPRPKRIWNILANRACKDA 833
Query: 770 IMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLV 808
+ +GD L +M I + LA L PWNCPHGRPTM+ L+
Sbjct: 834 VKLGDPLTMKQMIVIKDRLAGLVHPWNCPHGRPTMKCLI 872
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 93/166 (56%), Gaps = 6/166 (3%)
Query: 81 AVFLCQAYALIAKGVRFVCTNTTGKN--VKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP 138
AV + Q YALI +RF+ TN + N + S+ T S S+++ +FG N +
Sbjct: 173 AVGIVQQYALIYPEIRFLLTNMSSTNHQISSLFSSTGTSKSIREVSGEIFGSNFIKNVLD 232
Query: 139 VAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVD-LPKVSKLVNELYKGANSRQ 197
+ + + D+ VEG +S P +GR D Q F+N RPVD + K+ + + +++K +S+
Sbjct: 233 IKLTR-DTWSVEGIISTPQ--TGRQNNDIQILFINRRPVDGMKKLKRCIKDVHKQFSSKY 289
Query: 198 YPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIY 243
++N + ++ DVN+ PDKR++F E +I L+EG+ E+Y
Sbjct: 290 NVAYVLNINIDSKHVDVNLAPDKRRLFLMQEDTITRQLKEGILELY 335
Score = 48.1 bits (113), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 32/52 (61%)
Query: 27 QVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFK 78
QVI ++ V+ELVEN++DAGAT I I L + G V DN GI NF+
Sbjct: 18 QVISEVKCVVRELVENAIDAGATDIVIKLVDQGLTSISVSDNASGIEAFNFE 69
>gi|303285402|ref|XP_003061991.1| DNA mismatch repair protein, MLH2/PMS1/Pms2 family [Micromonas
pusilla CCMP1545]
gi|226456402|gb|EEH53703.1| DNA mismatch repair protein, MLH2/PMS1/Pms2 family [Micromonas
pusilla CCMP1545]
Length = 345
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/171 (41%), Positives = 99/171 (57%), Gaps = 15/171 (8%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKS--------VVLKTQGS--SSLKDNIITVFGMNIY 133
L QAYA+I+ GVR VC++ + V+ V+ T+G + ++ N+ VFG
Sbjct: 174 LLQAYAMISAGVRIVCSHQRAEGVRGGGNGGGRETVVNTRGGVHADVRSNVACVFGAKAV 233
Query: 134 NCLEPV-AICKSD-SCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYK 191
L PV A+ +D C+V G +SK GR GDRQ+F+VN RPVDLPK +K +NE Y+
Sbjct: 234 QGLTPVDAVLGADLGCRVVGLVSKAQAECGRAGGDRQFFYVNGRPVDLPKATKALNETYR 293
Query: 192 GANS---RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGL 239
S + P A+++F +PT A DVNVTPDKR+V E I+ LR L
Sbjct: 294 AQFSVAITRAPFAVLDFRLPTNAYDVNVTPDKREVLLHSEKEIMAELRRVL 344
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/66 (62%), Positives = 53/66 (80%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR I VHRIC+GQV+ DL+SAVKELVEN+LDAGAT++E+ ++E+G E +VVDNG G
Sbjct: 2 IRAIAPDAVHRICSGQVVLDLASAVKELVENALDAGATNVEVRVREHGVECVEVVDNGAG 61
Query: 72 ISPNNF 77
+S NF
Sbjct: 62 VSEENF 67
>gi|17942780|pdb|1H7S|A Chain A, N-Terminal 40kda Fragment Of Human Pms2
gi|17942781|pdb|1H7S|B Chain B, N-Terminal 40kda Fragment Of Human Pms2
Length = 365
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 98/177 (55%), Gaps = 17/177 (9%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP- 138
+ V + AY +I+ G+R CTN G+ + V+ T GS S+K+NI +VFG L P
Sbjct: 183 KXVQVLHAYCIISAGIRVSCTNQLGQGKRQPVVCTGGSPSIKENIGSVFGQKQLQSLIPF 242
Query: 139 VAICKSDS-CK---------------VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKV 182
V + SDS C+ + GF+S+ G GR+ DRQ+FF+N RP D KV
Sbjct: 243 VQLPPSDSVCEEYGLSCSDALHNLFYISGFISQCTHGVGRSSTDRQFFFINRRPCDPAKV 302
Query: 183 SKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGL 239
+LVNE+Y N QYP ++N V + D+NVTPDKR++ +E +L L+ L
Sbjct: 303 CRLVNEVYHXYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSL 359
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 55/67 (82%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+PI++ VH+IC+GQV+ LS+AVKELVENSLDAGAT+I++ LK+YG + +V DNGCG
Sbjct: 15 IKPIDRKSVHQICSGQVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSDNGCG 74
Query: 72 ISPNNFK 78
+ NF+
Sbjct: 75 VEEENFE 81
>gi|429963872|gb|ELA45870.1| hypothetical protein VCUG_02641 [Vavraia culicis 'floridensis']
Length = 583
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/210 (35%), Positives = 111/210 (52%), Gaps = 41/210 (19%)
Query: 610 RKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLK 669
+K+D ++VIGQFN GFI+G L+ L I DQHA DE YNFE + ++ ++Q LL+P+
Sbjct: 406 QKKDLKNVRVIGQFNQGFILGTLNGYLMIFDQHAVDEIYNFEMIKKNIKFSKQSLLKPIN 465
Query: 670 LDLTPEEEVVA---------SMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFG 720
+ + +M ++ R F ++E+ +L A P K F
Sbjct: 466 VQDSSMLLSDDSSSPNRLDQAMLTNLNRL--FEIKEN---------KLTASPSFNKHLFN 514
Query: 721 VEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNE 780
+ D +L+ST GE S +++ +AS+ACR SIMIGD L
Sbjct: 515 INDYMELVST-----GEVSSLTN----------------KIASKACRMSIMIGDKLNMCT 553
Query: 781 MQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
M +I+ +L++L++PWNCPHGRPT R L L
Sbjct: 554 MNRIIYNLSELDNPWNCPHGRPTFRVLYKL 583
>gi|17942778|pdb|1H7U|A Chain A, Hpms2-atpgs
gi|17942779|pdb|1H7U|B Chain B, Hpms2-atpgs
Length = 365
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/181 (37%), Positives = 100/181 (55%), Gaps = 17/181 (9%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP- 138
+ V + AY +I+ G+R CTN G+ + V+ T GS S+K+NI +VFG L P
Sbjct: 183 KMVQVLHAYCIISAGIRVSCTNQLGQGKRQPVVCTGGSPSIKENIGSVFGQKQLQSLIPF 242
Query: 139 VAICKSDS-CK---------------VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKV 182
V + SDS C+ + GF+S+ G GR+ DRQ+FF+N RP D KV
Sbjct: 243 VQLPPSDSVCEEYGLSCSDALHNLFYISGFISQCTHGVGRSSTDRQFFFINRRPCDPAKV 302
Query: 183 SKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEI 242
+LVNE+Y N QYP ++N V + D+NVTPDKR++ +E +L L+ L +
Sbjct: 303 CRLVNEVYHMYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLIGM 362
Query: 243 Y 243
+
Sbjct: 363 F 363
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 55/67 (82%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+PI++ VH+IC+GQV+ LS+AVKELVENSLDAGAT+I++ LK+YG + +V DNGCG
Sbjct: 15 IKPIDRKSVHQICSGQVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSDNGCG 74
Query: 72 ISPNNFK 78
+ NF+
Sbjct: 75 VEEENFE 81
>gi|17942770|pdb|1EA6|A Chain A, N-Terminal 40kda Fragment Of Nhpms2 Complexed With Adp
gi|17942771|pdb|1EA6|B Chain B, N-Terminal 40kda Fragment Of Nhpms2 Complexed With Adp
Length = 364
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/181 (37%), Positives = 100/181 (55%), Gaps = 17/181 (9%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP- 138
+ V + AY +I+ G+R CTN G+ + V+ T GS S+K+NI +VFG L P
Sbjct: 183 KMVQVLHAYCIISAGIRVSCTNQLGQGKRQPVVCTGGSPSIKENIGSVFGQKQLQSLIPF 242
Query: 139 VAICKSDS-CK---------------VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKV 182
V + SDS C+ + GF+S+ G GR+ DRQ+FF+N RP D KV
Sbjct: 243 VQLPPSDSVCEEYGLSCSDALHNLFYISGFISQCTHGVGRSSTDRQFFFINRRPCDPAKV 302
Query: 183 SKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEI 242
+LVNE+Y N QYP ++N V + D+NVTPDKR++ +E +L L+ L +
Sbjct: 303 CRLVNEVYHMYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLIGM 362
Query: 243 Y 243
+
Sbjct: 363 F 363
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 55/67 (82%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+PI++ VH+IC+GQV+ LS+AVKELVENSLDAGAT+I++ LK+YG + +V DNGCG
Sbjct: 15 IKPIDRKSVHQICSGQVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSDNGCG 74
Query: 72 ISPNNFK 78
+ NF+
Sbjct: 75 VEEENFE 81
>gi|124512056|ref|XP_001349161.1| mismatch repair protein pms1 homologue, putative [Plasmodium
falciparum 3D7]
gi|23498929|emb|CAD51007.1| mismatch repair protein pms1 homologue, putative [Plasmodium
falciparum 3D7]
Length = 1330
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 134/296 (45%), Gaps = 85/296 (28%)
Query: 603 TELERLFRKEDFGRMKVIGQFNLGFIIGKLD----------------------------- 633
T+ + F+ F ++K+ GQFN GF+I K+D
Sbjct: 984 TQKDLYFQSSLFNKLKICGQFNKGFVISKIDLLYFEKKKKKYGNEGHESECYKTHDNNSN 1043
Query: 634 ----QD---------------LFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTP 674
+D LFI+DQHAADEK NFE+ ++ + Q L+ + + ++P
Sbjct: 1044 NINCEDYDNFSNDNKHKSNYALFIIDQHAADEKSNFEKYNKIFTMKSQKLISKIHVQVSP 1103
Query: 675 EEEVVASMHMDIIRKNGFS---LEEDPHA-------------------LAGLRFRLKAVP 712
+ + +M I +NGF LEE H L L L ++P
Sbjct: 1104 AQVHIIQKYMSIFLQNGFEVQILEEPIHKRRKTNNNNINEPIDDEEEMLMELNVYLLSLP 1163
Query: 713 -FSKKITFGVEDVKDLISTLAD------NQGECSIISSYKMDTADSVC-------PSRVR 758
F+ KI V D L+ L + N+ E S+ ++ ++ P +V
Sbjct: 1164 VFNGKI-LEVVDFMSLLHHLTEHPVASYNESEVSVKTTIDLNNKTDTWFNYNFPRPQKVW 1222
Query: 759 AMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIR 814
+LAS+ACR++IM+G AL EM KI + L+ L +PWNCPHGRPT+++L++ I+
Sbjct: 1223 RILASKACRNAIMVGKALNIYEMIKIKKKLSFLKNPWNCPHGRPTIKYLINNVDIK 1278
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 98/171 (57%), Gaps = 13/171 (7%)
Query: 82 VFLCQAYALIAKGVRFVCTNTTG-----KNVKSVVLKTQGSSSLKDNIITVFGM-NIYNC 135
+ L Q YA+I ++FV N KN+ +L T G+ S+K N +++G NI N
Sbjct: 174 LLLMQQYAIIYHNIKFVIYNIVTSKGCTKNMN--LLITNGTDSIKKNFYSIYGKRNIGNL 231
Query: 136 LEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPK-VSKLVNELYKGAN 194
+E + + G++S SGR D Q++++N RP+ + K V+KL+N +Y+ N
Sbjct: 232 IE--FNIDGNEWNIRGYIS--DSNSGRRDKDLQFYYINSRPIHILKNVNKLINTIYREFN 287
Query: 195 SRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSP 245
SR YPI I N + T+ D+NVTPDKR+VFF+ E + ++ L ++++P
Sbjct: 288 SRLYPIIICNILSDTKNIDINVTPDKREVFFTFEQEMCEHMKTALVKLFTP 338
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 45/67 (67%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ I + +H IC+ QVI LSS VKELVENS+DA A+ I+I L E G + +V DNG G
Sbjct: 3 IKNIGEESIHNICSSQVIFTLSSVVKELVENSIDADASEIKIKLVESGIKLIEVNDNGVG 62
Query: 72 ISPNNFK 78
I NF+
Sbjct: 63 IKKINFE 69
>gi|336268140|ref|XP_003348835.1| hypothetical protein SMAC_01858 [Sordaria macrospora k-hell]
gi|380094093|emb|CCC08310.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1251
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 104/217 (47%), Gaps = 22/217 (10%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCL--- 136
+ V L YA I GV+F + K + V+ T+G+ + ++NII VFG+ L
Sbjct: 176 KVVNLLNQYACIQTGVKFTVSQQPTKGKRMVLFSTKGNPTTRENIINVFGVKTMTALIAM 235
Query: 137 -----------------EPVAICKSDSCKVE--GFLSKPGQGSGRNLGDRQYFFVNDRPV 177
P A + + +V G +S+P G GR DRQ F+VN RP
Sbjct: 236 DLRLQLKPTTTTGLLNKAPAAQDEDTTTEVRICGHISRPAHGEGRQTPDRQMFYVNGRPC 295
Query: 178 DLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALRE 237
LP+ +K+ NE+Y+ NS Q P + + T DVNV+PDKR V D+ +L LRE
Sbjct: 296 GLPQFAKVFNEVYRSYNSTQSPFIFADIQLDTHLYDVNVSPDKRTVLLHDQGQMLDNLRE 355
Query: 238 GLQEIYSPNNASYSVNKVEQLIEPEKSGPSSGAESCM 274
L E++ + + V+ ++ L GPS+ +
Sbjct: 356 SLIELFELQDVTIPVSHIQPLKSSTFRGPSTAPSGSL 392
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 50/71 (70%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ I+ +H+I +GQVI DL S KELVEN+LDAGAT++++ K G + +V DNG G
Sbjct: 7 IKAIDPSTIHQIQSGQVIVDLCSVAKELVENALDAGATTVDVRFKNQGLDSIEVQDNGSG 66
Query: 72 ISPNNFKVRAV 82
IS +N++ A+
Sbjct: 67 ISSSNYESIAL 77
>gi|116195894|ref|XP_001223759.1| hypothetical protein CHGG_04545 [Chaetomium globosum CBS 148.51]
gi|88180458|gb|EAQ87926.1| hypothetical protein CHGG_04545 [Chaetomium globosum CBS 148.51]
Length = 1072
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 99/198 (50%), Gaps = 19/198 (9%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCL--- 136
+ + L YA + GV+F + K + V+ T+G+ + ++NII VFG+ N L
Sbjct: 201 KVINLLNQYACVQTGVKFTVSQQPTKGKRMVLFSTKGNPTTRENIINVFGVKTMNALILM 260
Query: 137 ----------------EPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLP 180
+ A + +V G +S+P G GR DRQ F+VN RP LP
Sbjct: 261 DLKLELTPTAGPLNKGKAKASGSATEVRVLGHVSRPAHGEGRQTPDRQMFYVNGRPCGLP 320
Query: 181 KVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQ 240
+ +K+ NE+Y+ N+ Q P + + T DVNV+PDKR + D+ +L LRE L
Sbjct: 321 QFAKVFNEVYRSYNASQSPFIFADIQLDTHLYDVNVSPDKRTILLHDQGQMLDNLRESLI 380
Query: 241 EIYSPNNASYSVNKVEQL 258
E++ + + V++ + L
Sbjct: 381 ELFETQDVTIPVSQAQAL 398
Score = 105 bits (263), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 100/197 (50%), Gaps = 22/197 (11%)
Query: 545 QFSIQDLRKRRQQRLSIMQSSCHTSGSVKMRRCFAAATLELSQPE-----NEERKARALA 599
Q ++ KR+ L++ Q + ++ R AA T + P+ N A
Sbjct: 837 QLFVKGRSKRKDMTLNLEQQVKTSVDEIQQR--IAALTRHIPPPQPGVSPNTSPDGLEAA 894
Query: 600 AATTELERLFRKEDFGRMKVIGQFNLGFIIG-------------KLDQDLFIVDQHAADE 646
A +L K DF +M+++GQFNLGF++ D +LFI+DQHA+DE
Sbjct: 895 DAEEKLSLKISKTDFAKMRIVGQFNLGFVLAVREAAASPENTPEAADDELFIIDQHASDE 954
Query: 647 KYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHAL--AGL 704
KYNFERL +T + Q L++P LDLT EE + H+ + +NGF ++ D G
Sbjct: 955 KYNFERLQATTTVQSQRLVQPKTLDLTALEEEIILEHLPALERNGFVVQADTSGARPVGS 1014
Query: 705 RFRLKAVPFSKKITFGV 721
R +L ++P S++ TF +
Sbjct: 1015 RVQLLSLPLSRETTFSL 1031
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 48/96 (50%), Gaps = 25/96 (26%)
Query: 8 NSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSI---------------- 51
+S TI+ I VH+I +GQVI DL S KELVENS DA AT+I
Sbjct: 3 SSATIKAIESSTVHQIQSGQVIVDLCSVAKELVENSFDARATAIGTWLSLPKKAHARRAA 62
Query: 52 ---------EIALKEYGEEWFQVVDNGCGISPNNFK 78
++ K G + +V DNG GI+ +N++
Sbjct: 63 LVNKATPLADVRFKNQGLDSIEVQDNGLGIASHNYE 98
>gi|452823372|gb|EME30383.1| DNA mismatch repair protein PMS2 [Galdieria sulphuraria]
Length = 687
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 63/137 (45%), Positives = 83/137 (60%), Gaps = 1/137 (0%)
Query: 601 ATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQST-VL 659
A EL ++ K+DF M++IGQFN GFII K LFIVDQHAADE+YNFE L + L
Sbjct: 536 AEMELRQVLHKDDFLSMQIIGQFNQGFIIAKWCGHLFIVDQHAADERYNFEYLHKDQGEL 595
Query: 660 NQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITF 719
QPL++PL + L+ EEE + H+D I GF D + G R L VPF +K TF
Sbjct: 596 PCQPLIQPLTMHLSAEEEWLLINHLDWIEPWGFRFSVDMDKMPGNRISLLQVPFHEKTTF 655
Query: 720 GVEDVKDLISTLADNQG 736
G +DV ++I L + +
Sbjct: 656 GTDDVLEMIHQLRNREA 672
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 85/169 (50%), Gaps = 9/169 (5%)
Query: 79 VRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP 138
R V L Q +ALI+ GVRF + GK + LKTQG SL D+I +F L P
Sbjct: 173 TRIVDLIQRFALISNGVRFALS-IDGKRI----LKTQGHGSLLDSIAQLFSTMTVASLIP 227
Query: 139 VAICKS---DSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELY-KGAN 194
V + D ++ GF+SKP + R+ DRQY F +RP++L K+ L +Y K
Sbjct: 228 VDTYQMQDFDKARITGFVSKPEKTCARSAADRQYIFFRNRPIELRKLCSLATRIYQKQVG 287
Query: 195 SRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIY 243
+P+ ++ + D+N+ DKR++F D +L A E++
Sbjct: 288 QHSFPLLFLHIELEDGTFDINIATDKRQLFIHDADRLLEACTAYFCELW 336
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 48/76 (63%), Gaps = 5/76 (6%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALK-EYGEEWFQVVDNGC 70
I+ +++ H+I Q + D ++A+KEL+EN+LDAGAT I++ +K + QV+DNG
Sbjct: 5 IQSLSRACQHKISLAQAVLDTTAALKELIENALDAGATQIDVCIKGPSALDLLQVMDNGS 64
Query: 71 GISPNNFKVRAVFLCQ 86
GI +F F+C+
Sbjct: 65 GIEARDFP----FVCK 76
>gi|299738271|ref|XP_001838229.2| DNA mismatch repair protein [Coprinopsis cinerea okayama7#130]
gi|298403231|gb|EAU83597.2| DNA mismatch repair protein [Coprinopsis cinerea okayama7#130]
Length = 918
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 73/217 (33%), Positives = 112/217 (51%), Gaps = 42/217 (19%)
Query: 80 RAVFLCQAYAL----IAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFG------ 129
+A+ L AYAL + GVR TN T K KSV L+TQG+ SL+ ++ ++G
Sbjct: 180 KALSLLYAYALGPCAASPGVRMSVTNHTEKGQKSVQLQTQGTPSLRASVTALWGPKAMEN 239
Query: 130 -------------MNIYNCLEPVAICKSDSC--KVEGFLSKPGQGSGRNLGDRQYFFVND 174
++ L+ SDS V+G SK G GR DRQ+F++N
Sbjct: 240 LVELDVSFSIETEKSVLKRLKAFKQSASDSIDIHVKGLTSKFAVGCGRLNTDRQFFYING 299
Query: 175 RPVDLPKVSKLVNELYKGANSRQYPIAIMNFIVPT-----------------RACDVNVT 217
RP +LPKV K NE+Y+ N+ Q P + +FI+PT +CDVNV+
Sbjct: 300 RPCNLPKVQKAFNEVYRTFNANQAPFLVADFIIPTGLLSSLVTPLPSNPSFADSCDVNVS 359
Query: 218 PDKRKVFFSDECSILHALREGLQEIYSPNNASYSVNK 254
PDKR + +E S++ AL+E L++ +S + A++ + +
Sbjct: 360 PDKRTILVHNEDSLITALKEALEDHFSSSRATFDLGQ 396
Score = 112 bits (281), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 64/138 (46%), Positives = 80/138 (57%), Gaps = 20/138 (14%)
Query: 601 ATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQ----------DLFIVDQHAADEKYNF 650
A+ L R+ K DF M VIGQFNLGFII + Q DLFIVDQHAADEKYNF
Sbjct: 767 ASDALARVIEKGDFASMAVIGQFNLGFIIVQRKQPGSEDKPPMDDLFIVDQHAADEKYNF 826
Query: 651 ERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSL---------EEDPHAL 701
E L +T + Q LLRP L+LT +E++A +++++R NGF + EE P +
Sbjct: 827 ETLQLTTKIQAQKLLRPRPLELTAGDELLAIENLEVLRNNGFEVEMIEENMDGEETPRSQ 886
Query: 702 AGLRFRLKAVPFSKKITF 719
G R RL A P SK F
Sbjct: 887 GG-RLRLTAQPVSKSTVF 903
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 51/66 (77%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IRPI++ VHRI +GQV+ DL +AVKELVENS+DAGAT+IE+ K+YG +V+DNG G
Sbjct: 7 IRPIDQASVHRITSGQVVIDLQTAVKELVENSIDAGATNIEVRFKQYGLTSVEVIDNGSG 66
Query: 72 ISPNNF 77
I +F
Sbjct: 67 IDEKDF 72
>gi|189197831|ref|XP_001935253.1| DNA mismatch repair protein PMS1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187981201|gb|EDU47827.1| DNA mismatch repair protein PMS1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 848
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 92/184 (50%), Gaps = 24/184 (13%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAI-- 141
L AYA I+ GV+F +N K K++ T ++S +DNI V+G L P+A+
Sbjct: 180 LLNAYACISVGVKFSVSNQIPKGKKTIAFSTNANTSTRDNISNVYGAKTIAALVPLALEF 239
Query: 142 ----------------------CKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDL 179
S + K+ G +S+P G GR DRQ FFVN RP L
Sbjct: 240 AMDPSNRPGATQTARNWSTQEDPGSRTVKIVGHISRPVVGEGRQTPDRQMFFVNSRPCTL 299
Query: 180 PKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGL 239
P+V+K NE+YK N Q P + + T A DVNV+PDKR + D+ ++L L+ L
Sbjct: 300 PQVAKAFNEVYKSYNVTQSPFIFADIQLDTNAYDVNVSPDKRTIMLHDQTALLENLKNSL 359
Query: 240 QEIY 243
E++
Sbjct: 360 IELF 363
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/225 (34%), Positives = 115/225 (51%), Gaps = 30/225 (13%)
Query: 562 MQSSCHTSGSVKMRRCFAAATLELSQPENEERKARALAAATTELERLFRKEDFGRMKVIG 621
+Q + TS + + ++ +L + EER L K DF M+++G
Sbjct: 639 LQKAIDTSPANTTDKSMLPSSAQLHDADPEER-----------LSLTVTKSDFHDMRIVG 687
Query: 622 QFNLGFIIG-------KLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTP 674
QFN GFII DLFI+DQHA+DEKYNFERL+ +TVL Q L+ P L+L+
Sbjct: 688 QFNQGFIIAVRPPTSTAPTSDLFIIDQHASDEKYNFERLAATTVLVSQRLVHPHPLELSA 747
Query: 675 EEEVVASMHMDIIRKNGFSL-------EEDPHALAGLRFRLKAVPFSKKITFGVEDVKDL 727
E+ + + + NGF + E L ++P SK+ITF D+++L
Sbjct: 748 VEKEIILANEHALLANGFVIETTDADEETPNPNNTTTTAHLTSLPMSKEITFSPTDLEEL 807
Query: 728 ISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMI 772
++ + DN S +S + P++VR +LASRACRSS+MI
Sbjct: 808 LALILDNPPSSSTSTSPYIPR-----PTKVRKLLASRACRSSVMI 847
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 54/76 (71%)
Query: 7 TNSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVV 66
+N TI+ I VH+I +GQVI DL S KELVENS+DAGATS+E+ K YG + +V
Sbjct: 2 SNMATIKAIEGRSVHQIQSGQVIVDLQSVCKELVENSIDAGATSVEVRFKNYGLDAIEVQ 61
Query: 67 DNGCGISPNNFKVRAV 82
DNG GI+P++++ A+
Sbjct: 62 DNGSGIAPDDYETIAL 77
>gi|389581921|dbj|GAB64642.1| DNA mismatch repair protein PMS2 [Plasmodium cynomolgi strain B]
Length = 1223
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 129/280 (46%), Gaps = 74/280 (26%)
Query: 608 LFRKEDFGRMKVIGQFNLGFIIGKLD---------------------------------Q 634
F+ F ++K+ GQFN GF+I K+D
Sbjct: 893 YFKSNLFEKLKICGQFNKGFVISKIDLLYFQRGRREKVVNPVGSGGKEEEEIEPQGNSSY 952
Query: 635 DLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSL 694
LFI+DQHAADEK NFE+ ++ + Q L+ + L+L+P + + +++I NGF +
Sbjct: 953 ALFIIDQHAADEKSNFEKYNKIFTMKSQKLISKIDLELSPAQIYIIEKNLEIFLHNGFDV 1012
Query: 695 E--EDP-----------------------HALAGLRFRLKAVPFSKKITFGVEDVKDLIS 729
E E+P AL ++ L ++P VED L+
Sbjct: 1013 EIVEEPVQKRRRVKAADSTDATDAADAGEGALMQVKVYLLSLPVFNGRILEVEDFMSLLH 1072
Query: 730 TLADNQGECSIISSYKM---------DTADSVC------PSRVRAMLASRACRSSIMIGD 774
L ++ +S++M T D+ P +V +LAS+ACR++IM+G
Sbjct: 1073 HLTEHPITYDK-ASFQMFIRNKGQPNKTTDTWFNYNFPRPQKVWRILASKACRNAIMVGK 1131
Query: 775 ALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIR 814
L EM KI + L+ L +PWNCPHGRPT++++++ I+
Sbjct: 1132 TLNVAEMIKIKKKLSVLKNPWNCPHGRPTIKYIINDMDIK 1171
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 95/164 (57%), Gaps = 10/164 (6%)
Query: 88 YALIAKGVRFVCTN--TTGKNVKSV--VLKTQGSSSLKDNIITVFGM-NIYNCLEPVAIC 142
YA+I V+F N T NVK++ +L G ++K ++ T++G NI N ++
Sbjct: 180 YAIIYCHVKFAIHNVVTVKGNVKNLNMLLTNGGKETVKKSVHTIYGKKNIGNLID--FNI 237
Query: 143 KSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPK-VSKLVNELYKGANSRQYPIA 201
S+ K+ ++S SGR D Q++++N RP+ + K V+K++N +Y+ NSR YPI
Sbjct: 238 DSEEWKLRAYISD--NNSGRRDRDIQFYYINSRPIHVLKNVNKIINSIYREFNSRLYPII 295
Query: 202 IMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSP 245
I N + T+ D+NVTPDKR+VFF E + ++ L ++ +P
Sbjct: 296 ICNILSDTKNFDINVTPDKREVFFIYENELCEKIKISLVKLLTP 339
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 46/67 (68%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ I + +H IC+ QVI LSS VKELVENS+DA AT I+I L E G + QV DNG G
Sbjct: 3 IQNIGEESIHNICSSQVIFTLSSVVKELVENSIDADATEIKIKLVENGIKLIQVNDNGAG 62
Query: 72 ISPNNFK 78
I +NF+
Sbjct: 63 IKKSNFE 69
>gi|119189999|ref|XP_001245606.1| hypothetical protein CIMG_05047 [Coccidioides immitis RS]
Length = 939
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 93/182 (51%), Gaps = 18/182 (9%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCL--- 136
+ + L AYA I+ GVRF N K VV T+ + + K+NI V+G L
Sbjct: 173 KVLGLLHAYACISTGVRFNVKNQMPKGKSVVVFATKSNPTTKENISNVYGAKTLLALIPL 232
Query: 137 ------EPVAICKS---------DSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPK 181
EP A K+ + V G++SKP G GR DRQ FFVN RP LP+
Sbjct: 233 DLELEFEPSAESKTSRRQQDGLVNKIFVHGYISKPVFGEGRQTPDRQMFFVNSRPCGLPQ 292
Query: 182 VSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQE 241
+++ NE+Y+ N Q P NF + T A DVNV+PDKR + D +++ +L+ L E
Sbjct: 293 IARAFNEVYRSFNISQSPFIFANFEMNTNAYDVNVSPDKRTILLHDAGALIESLKTSLTE 352
Query: 242 IY 243
++
Sbjct: 353 LF 354
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 88/150 (58%), Gaps = 15/150 (10%)
Query: 600 AATTELERLFRKEDFGRMKVIGQFNLGFIIG-------------KLDQDLFIVDQHAADE 646
+A T L K+DF +M+V+GQFNLGFI+ +LFI+DQHA+DE
Sbjct: 739 SAETRLSLTVSKDDFAKMRVVGQFNLGFILAIRPGTDSTDFQDNPTKDELFIIDQHASDE 798
Query: 647 KYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHA--LAGL 704
KYNFERL TV+ Q L+RP LDLT EE V ++ + KNGF ++ D G
Sbjct: 799 KYNFERLQAETVVQNQRLVRPKTLDLTAVEEEVIIDNIPTLEKNGFIVDIDTSGDEPIGR 858
Query: 705 RFRLKAVPFSKKITFGVEDVKDLISTLADN 734
R +L ++P SK++ F D+++LI L+++
Sbjct: 859 RCKLISLPLSKEVVFNTRDLEELIVLLSES 888
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 49/68 (72%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
TI+ I +H+I +GQVI DL S VKELVENSLDAGATSI+I K G + +V DNG
Sbjct: 3 TIKAIEARSIHQIQSGQVIVDLCSVVKELVENSLDAGATSIDIRFKNNGLDLIEVQDNGH 62
Query: 71 GISPNNFK 78
GI PNN++
Sbjct: 63 GIPPNNYE 70
>gi|320032950|gb|EFW14900.1| DNA mismatch repair protein [Coccidioides posadasii str. Silveira]
Length = 939
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 93/182 (51%), Gaps = 18/182 (9%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCL--- 136
+ + L AYA I+ GVRF N K VV T+ + + K+NI V+G L
Sbjct: 173 KVLGLLHAYACISTGVRFNVKNQMPKGKSVVVFATKSNPTTKENISNVYGAKTLLALIPL 232
Query: 137 ------EPVAICKSDSCK---------VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPK 181
EP A K+ + V G++SKP G GR DRQ FFVN RP LP+
Sbjct: 233 DLELEFEPSAESKTSRRQQDGQVNKIFVHGYISKPVFGEGRQTPDRQMFFVNSRPCGLPQ 292
Query: 182 VSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQE 241
+++ NE+Y+ N Q P NF + T A DVNV+PDKR + D +++ +L+ L +
Sbjct: 293 IARAFNEVYRSFNISQSPFIFANFEMNTNAYDVNVSPDKRTILLHDAGALIESLKASLTK 352
Query: 242 IY 243
++
Sbjct: 353 LF 354
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 88/150 (58%), Gaps = 15/150 (10%)
Query: 600 AATTELERLFRKEDFGRMKVIGQFNLGFIIG-------------KLDQDLFIVDQHAADE 646
+A T L KEDF +M+V+GQFNLGFI+ +LFI+DQHA+DE
Sbjct: 739 SAETRLSLTVSKEDFAKMRVVGQFNLGFILAIRPGTDSTDFQDNPTKDELFIIDQHASDE 798
Query: 647 KYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHA--LAGL 704
KYNFERL TV+ Q L+RP LDLT EE V ++ + KNGF ++ D G
Sbjct: 799 KYNFERLQAETVVQNQRLVRPKTLDLTAVEEEVIIDNIPTLEKNGFIVDIDTSGDEPIGR 858
Query: 705 RFRLKAVPFSKKITFGVEDVKDLISTLADN 734
R +L ++P SK++ F D+++LI L+++
Sbjct: 859 RCKLISLPLSKEVVFNTRDLEELIVLLSES 888
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 49/68 (72%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
TI+ I +H+I +GQVI DL S VKELVENSLDAGATSI+I K G + +V DNG
Sbjct: 3 TIKAIEARSIHQIQSGQVIVDLCSVVKELVENSLDAGATSIDIRFKNNGLDLIEVQDNGH 62
Query: 71 GISPNNFK 78
GI PNN++
Sbjct: 63 GIPPNNYE 70
>gi|323445867|gb|EGB02269.1| hypothetical protein AURANDRAFT_35408 [Aureococcus anophagefferens]
Length = 161
Score = 115 bits (288), Expect = 1e-22, Method: Composition-based stats.
Identities = 62/163 (38%), Positives = 93/163 (57%), Gaps = 10/163 (6%)
Query: 651 ERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKA 710
E L + T ++ QPLL PL LDL EE+ + + GF L + A G R + +
Sbjct: 1 EALWRDTRVDTQPLLAPLSLDLGATEELALLERRCTVERVGFRLAVNDLAPPGRRVAVIS 60
Query: 711 VPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSI 770
VP ++ TFGV D+++LI+ L D+ DT P ++ + AS+ACR+++
Sbjct: 61 VPSARGTTFGVSDIRELITLLDDDAAH---------DTPLPKLP-KLHTLFASKACRAAV 110
Query: 771 MIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTI 813
MIG L + +M ++L+HLA L PWNCPHGRPT RHL + ++
Sbjct: 111 MIGTPLIKTKMTQLLDHLATLLQPWNCPHGRPTTRHLAHVPSL 153
>gi|156095127|ref|XP_001613599.1| DNA mismatch repair protein PMS2 [Plasmodium vivax Sal-1]
gi|148802473|gb|EDL43872.1| DNA mismatch repair protein PMS2, putative [Plasmodium vivax]
Length = 1264
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 130/292 (44%), Gaps = 89/292 (30%)
Query: 608 LFRKEDFGRMKVIGQFNLGFIIGKLD------------------------------QDLF 637
F+ F ++K+ GQFN GF+I K+D LF
Sbjct: 925 YFKSNLFEKLKICGQFNKGFVISKIDLLYFQRGGGGGAVHPVGLGEEQAEPQGKGSYALF 984
Query: 638 IVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLE-- 695
I+DQHAADEK NFE+ ++ + Q L+ + L+L+P + V ++++ NGF +E
Sbjct: 985 IIDQHAADEKSNFEKYNKVFTMKSQRLISKIDLELSPAQIYVIEKNLEVFLHNGFDVEIV 1044
Query: 696 EDP-----------------------------------HALAGLRFRLKAVPFSKKITFG 720
E+P AL ++ L ++P
Sbjct: 1045 EEPLRKRRRGGAADGSGEADGSGQANVEDALTAAAAGEGALVQVKVYLLSLPVFNGKILE 1104
Query: 721 VEDVKDLISTLAD---------------NQGECSIISSYKMDTADSVC---PSRVRAMLA 762
VED L+ L + N+G+ + + DT + P RV +LA
Sbjct: 1105 VEDFMSLLHHLTEHPITYDKASFQMFIRNKGQ----PNKQTDTWFNYNFPRPQRVWRILA 1160
Query: 763 SRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIR 814
S+ACR+++M+G AL EM KI + L+ L +PWNCPHGRPT++++++ I+
Sbjct: 1161 SKACRNAVMVGKALNVAEMIKIKKKLSVLKNPWNCPHGRPTIKYIINDVDIK 1212
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 100/173 (57%), Gaps = 10/173 (5%)
Query: 82 VFLCQAYALIAKGVRFVCTN--TTGKNVKSV--VLKTQGSSSLKDNIITVFGM-NIYNCL 136
+ L Q YA+I V+F N T NVK++ +L G+ ++K ++ T++G NI N +
Sbjct: 174 LLLMQQYAIIYCKVKFSIQNVITVKGNVKNINLLLTNGGNETVKKSVHTIYGKKNIGNLI 233
Query: 137 EPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPK-VSKLVNELYKGANS 195
+ ++ K+ ++S SGR D Q++++N RP+ + K V+K++N +Y+ NS
Sbjct: 234 D--FNIDAEEWKLRAYISD--SNSGRRDRDIQFYYINSRPIHVLKNVNKIINSIYREFNS 289
Query: 196 RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNA 248
R YPI I N + T+ D+NVTPDKR+VFF E + ++ L ++ +P +
Sbjct: 290 RLYPIIICNILSETKNFDINVTPDKREVFFIYENELCERIKTALVKLLTPQTS 342
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 46/67 (68%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR I + +H IC+ QVI LSS VKELVENS+DA AT I+I L E G + QV DNG G
Sbjct: 3 IRNIGEESIHNICSSQVIFTLSSVVKELVENSIDADATEIKIKLVENGIKLIQVNDNGAG 62
Query: 72 ISPNNFK 78
I +NF+
Sbjct: 63 IKKSNFE 69
>gi|395328076|gb|EJF60471.1| DNA mismatch repair protein MutL [Dichomitus squalens LYAD-421 SS1]
Length = 425
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 100/182 (54%), Gaps = 25/182 (13%)
Query: 80 RAVFLCQAYALIA-----KGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFG----- 129
+A+ L AYAL+ KGVR + T + KSV ++T G+ S + ++ ++G
Sbjct: 181 KALSLLHAYALVPCAHDNKGVRLTVVHHTAQGSKSVQVRTDGTPSTRASVSAIWGPKALE 240
Query: 130 ----MNIYNCLEPVAIC-----------KSDSCKVEGFLSKPGQGSGRNLGDRQYFFVND 174
+++ +EP A +++ KV+G +SK G GRN DRQ+FFVN
Sbjct: 241 HLVDLDLAFPVEPEAALLRRLGPAQDDERANEVKVKGLISKFAVGCGRNGTDRQFFFVNG 300
Query: 175 RPVDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHA 234
RP KV K NE+Y+ N+ Q P I +FI+PT +CD+NV+PDKR + E +++ A
Sbjct: 301 RPCAPSKVQKAFNEVYRSFNATQSPFVIADFILPTDSCDINVSPDKRTILLHSENNLVQA 360
Query: 235 LR 236
L+
Sbjct: 361 LK 362
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/71 (53%), Positives = 53/71 (74%)
Query: 7 TNSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVV 66
T +I ++ G +H I +GQV+ DL +AVKELVENSLDAGAT+I++ K+YG + F+VV
Sbjct: 6 TRDRSISVLDAGSIHNISSGQVVVDLQTAVKELVENSLDAGATTIDVRFKDYGLDSFEVV 65
Query: 67 DNGCGISPNNF 77
DNG GI P ++
Sbjct: 66 DNGSGIPPQDY 76
>gi|312087899|ref|XP_003145652.1| hypothetical protein LOAG_10077 [Loa loa]
Length = 691
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 81/146 (55%), Gaps = 13/146 (8%)
Query: 665 LRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDV 724
+ P LDL +E + ++DI NGF + D + G R L A+P + F + D+
Sbjct: 553 ISPRVLDLGVVKEAILRDNVDIFNYNGFEFQFDDEEVVGKRALLTAIPVLQSWQFSISDI 612
Query: 725 KDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKI 784
+++S L D G Y+ P+++R + ASRACR S+MIG +L M+KI
Sbjct: 613 DEMLSVLCDFPGMM-----YR--------PAKLRKLFASRACRKSVMIGSSLTMAHMEKI 659
Query: 785 LEHLADLNSPWNCPHGRPTMRHLVDL 810
+ HL L+ PWNCPHGRPT+RHL L
Sbjct: 660 VRHLGTLDHPWNCPHGRPTLRHLCSL 685
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 77/180 (42%), Gaps = 44/180 (24%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFG--------MNIYNC 135
+ Q++AL VRFV + ++ G++S+KD ++ +FG ++I
Sbjct: 127 VVQSFALSRTNVRFVVNSLMDGKQHQALVTPGGNASIKDIVVNLFGARFEKGTVLDIIQQ 186
Query: 136 LEPVAIC---------KSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLV 186
+IC K D K+ G++S G G++ DRQ+ + N RPVD KV +
Sbjct: 187 EPDESICALYGISDHSKFDDIKITGYISSCVHGQGKSTADRQFVYFNKRPVDYAKVESI- 245
Query: 187 NELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPN 246
DVNV+PDKR VFF E + LR L ++P+
Sbjct: 246 --------------------------DVNVSPDKRSVFFEREKELFALLRASLLATFAPH 279
>gi|393245222|gb|EJD52733.1| DNA mismatch repair protein MutL [Auricularia delicata TFB-10046
SS5]
Length = 402
Score = 114 bits (286), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 97/179 (54%), Gaps = 22/179 (12%)
Query: 80 RAVFLCQAYALIA-----KGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYN 134
+A+ L QAYAL+ GVRFV +N + ++T+G+ +++ + ++G +
Sbjct: 174 KALTLLQAYALVPCAIENGGVRFVVSNVLDIGGRKTQIQTKGNGAIQTAVTAMWGPKAMD 233
Query: 135 CLEPV-----------------AICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPV 177
+ P+ I ++ K+ G +SK G GR DRQY FVN RP
Sbjct: 234 KVVPLDIDFDVEAERSVLKRMANISATNHVKLTGLISKFAVGCGRPGSDRQYLFVNGRPC 293
Query: 178 DLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALR 236
+LPKV + +NE Y+ N+ Q P ++N I+PT CD+NV+PDKR +F +E + + AL+
Sbjct: 294 NLPKVIRAINETYRQFNATQTPFVVLNIIIPTETCDINVSPDKRTIFLHNEQNFITALK 352
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 50/67 (74%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
+I+ I+ +HR+ +GQV+ DL + VKELVENSLDAGATSI++ K YG +V+DNG
Sbjct: 2 SIQGIDAASIHRLTSGQVVTDLQTCVKELVENSLDAGATSIDVRFKNYGVASIEVIDNGS 61
Query: 71 GISPNNF 77
GI+P ++
Sbjct: 62 GIAPADY 68
>gi|330946024|ref|XP_003306681.1| hypothetical protein PTT_19873 [Pyrenophora teres f. teres 0-1]
gi|311315731|gb|EFQ85232.1| hypothetical protein PTT_19873 [Pyrenophora teres f. teres 0-1]
Length = 1003
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/184 (34%), Positives = 91/184 (49%), Gaps = 24/184 (13%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAI-- 141
L AYA I+ GV+F +N K K++ T ++S +DNI V+G L P+ +
Sbjct: 177 LLNAYACISVGVKFSVSNQIPKGKKTIAFSTNANTSTRDNISNVYGAKTIAALVPLTLDF 236
Query: 142 ----------------CK------SDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDL 179
C S + K+ G +S+P G GR DRQ FFVN R L
Sbjct: 237 AMDPSNRPGATQTARNCSTQEDPGSRTVKIIGHISRPVVGEGRQTPDRQMFFVNSRSCTL 296
Query: 180 PKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGL 239
P+V+K NE+YK N Q P + + T A DVNV+PDKR + D+ ++L L+ L
Sbjct: 297 PQVAKAFNEVYKSYNVTQSPFIFADIQLDTNAYDVNVSPDKRTIMLHDQTALLEKLKNSL 356
Query: 240 QEIY 243
E++
Sbjct: 357 IELF 360
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/152 (40%), Positives = 86/152 (56%), Gaps = 23/152 (15%)
Query: 611 KEDFGRMKVIGQFNLGFIIG-------KLDQDLFIVDQHAADEKYNFERLSQSTVLNQQP 663
K DF M+++GQFNLGFII DLFI+DQHA+DEKYNFERL+ +TVL Q
Sbjct: 845 KSDFHEMRIVGQFNLGFIIAVRPPTSTAPTSDLFIIDQHASDEKYNFERLAATTVLVPQR 904
Query: 664 LLRPLKLDLTPEEEVVASMHMDIIRKNGFSL------------EEDPHALAGLRFRLKAV 711
L+ P L+LT E+ + + + NGF + E +PH A L ++
Sbjct: 905 LVHPHPLELTAVEKEIILANEHALTANGFVIDMTTDPDPSADEESNPHNTAA---HLTSL 961
Query: 712 PFSKKITFGVEDVKDLISTLADNQGECSIISS 743
P SK+ITF D+++L++ + DN CS S+
Sbjct: 962 PMSKEITFSPTDLEELLALILDN-PPCSSTST 992
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 52/72 (72%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
TI+ I VH+I +GQVI DL S KELVENS+DAGATS+E+ K YG + +V DNG
Sbjct: 3 TIKAIEGRSVHQIQSGQVIVDLQSVCKELVENSIDAGATSVEVRFKNYGLDAIEVQDNGS 62
Query: 71 GISPNNFKVRAV 82
GI+P++++ A+
Sbjct: 63 GIAPDDYETIAL 74
>gi|327179556|gb|AEA30125.1| mismatch repair protein [Tritrichomonas foetus]
Length = 589
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 136/299 (45%), Gaps = 39/299 (13%)
Query: 513 EDLSVAASHLQFSGSILDAPVPSSSLDICSTLQFSIQDLRKRRQQRLSIMQSSCHTSGSV 572
ED+ A L S +D PSSS DI ++ ++ R LS GSV
Sbjct: 302 EDMLKALICLSLQKSWIDEQSPSSSPDI------TLHRIKPTRPLCLS---------GSV 346
Query: 573 KMRRCFAAATLELSQPENEERKARALAAATTELERLFRKEDFGRMKVIGQFNLGFIIGKL 632
+ LE ++ + E F M++IGQ+N F+I +L
Sbjct: 347 SKSKLTTQKLLE-----RKDXXXXXXXXXXXXXNNVIETESFDNMEIIGQWNKSFLITRL 401
Query: 633 DQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGF 692
D++ +DQHAA E NFE+L + +Q LL P+ L TPE+ A H + + GF
Sbjct: 402 GSDVYAIDQHAACEAQNFEKLRKVKSKKKQKLLEPVLLKATPEDIENAISHREKCSQFGF 461
Query: 693 SLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSV 752
+ + ++ +P + + G+ED+++L+ + D + +++
Sbjct: 462 EYD-----VCDDGIKVTTIPSDQNVVNGIEDLQELLGMIHD------------VPQSNTP 504
Query: 753 CPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTM--RHLVD 809
R LA AC SS+ +GD + +++K+L +A + PWNCPHGRPT H++D
Sbjct: 505 MTRMARIQLAFHACHSSVRVGDVMNNQQIKKLLTRMAHSDYPWNCPHGRPTWCCIHILD 563
Score = 44.3 bits (103), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 25 AGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFKV 79
A + + ++ ++EL+ENSLDA +T I + + G + V DNGCGIS ++
Sbjct: 14 ATETVSTIAHCLRELIENSLDAQSTIINVRMTGNGLDSIVVTDNGCGISKEGLQI 68
>gi|221052410|ref|XP_002257781.1| mismatch repair protein pms1 homologue [Plasmodium knowlesi strain H]
gi|193807612|emb|CAQ38117.1| mismatch repair protein pms1 homologue,putative [Plasmodium knowlesi
strain H]
Length = 1193
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 129/288 (44%), Gaps = 89/288 (30%)
Query: 609 FRKEDFGRMKVIGQFNLGFIIGKLD------------------------------QDLFI 638
F+ F ++++ GQFN GF+I K+D LFI
Sbjct: 861 FKSNLFEKLQICGQFNKGFVISKIDLLYFQRGTEGKVVDPGGSGGEEAEPKGNSNYALFI 920
Query: 639 VDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLE--E 696
+DQHAADEK NFE+ ++ + Q L+ + L+L+P + + +++I NGF +E E
Sbjct: 921 IDQHAADEKSNFEKYNKIFTMKSQKLISKIDLELSPAQIYIIEKNLEIFLHNGFDVEIVE 980
Query: 697 DPHALAGLRFRLKA--------------------------------VPFSKKITFGVEDV 724
+P A R RLKA +P VED
Sbjct: 981 EP---AQKRRRLKADDSADAIDPTNVTDATDTGEGVLMQVKVYLLSLPVFNGKILEVEDF 1037
Query: 725 KDLISTLAD---------------NQGECSIISSYKMDTA---DSVCPSRVRAMLASRAC 766
L+ L + N+G+ + K DT + P +V +LAS+AC
Sbjct: 1038 MSLLHHLTEHPITYDKAKFQMFIRNKGQ----PNKKTDTWFNHNFPRPQKVWRILASKAC 1093
Query: 767 RSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIR 814
R++IM+G L EM KI + L+ L +PWNCPHGRPT++++++ I+
Sbjct: 1094 RNAIMVGKPLNVTEMIKIKKKLSVLKNPWNCPHGRPTIKYIINDMDIK 1141
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 98/170 (57%), Gaps = 10/170 (5%)
Query: 82 VFLCQAYALIAKGVRFVCTN--TTGKNVKSV--VLKTQGSSSLKDNIITVFGM-NIYNCL 136
+ L Q YA+I ++F N T NVK++ +L G S+K+++ T++G NI N +
Sbjct: 174 LLLMQQYAIIYSHIKFCIQNIVTVKGNVKNMNMLLTNGGKESIKNSVHTIYGKRNIGNLI 233
Query: 137 EPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPK-VSKLVNELYKGANS 195
+ + K+ ++S SGR D Q++++N+RP+ + K V+K++N +Y+ NS
Sbjct: 234 D--FNIDEEEWKLRAYISD--NNSGRRDRDIQFYYINNRPIHVLKNVNKIINSIYREFNS 289
Query: 196 RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSP 245
R YPI I N + T+ D+NVTPDKR+VFF E + ++ L + +P
Sbjct: 290 RLYPIIICNILSDTKNFDINVTPDKREVFFIYENELCEKIKTSLVSLLTP 339
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 46/67 (68%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ I + +H IC+ QVI LSS VKELVENS+DA AT I+I L E G + QV DNG G
Sbjct: 3 IQNIGEESIHNICSSQVIFTLSSVVKELVENSIDADATEIKIKLVENGIKLIQVNDNGAG 62
Query: 72 ISPNNFK 78
I +NF+
Sbjct: 63 IKKSNFE 69
>gi|123400320|ref|XP_001301639.1| ATPase [Trichomonas vaginalis G3]
gi|121882844|gb|EAX88709.1| ATPase, putative [Trichomonas vaginalis G3]
Length = 585
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 107/208 (51%), Gaps = 19/208 (9%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLT 673
F M++IGQ+N FII K D++ +DQHAA E NFE+L + + Q L+ P+ + T
Sbjct: 389 FKDMEIIGQWNQSFIITKYGCDIYAIDQHAAMEAQNFEKLRKKCSIQSQRLISPIVISAT 448
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
P+E A ++ G+ + +++ +K +P + G +D+ +LI+ L +
Sbjct: 449 PQEISAAEECKQKCKEFGYDYDISDNSI-----HVKKIPSITTVATGSDDLLELITMLHE 503
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNS 793
+ A + R +A RAC SS+ +GD + ++M+ +L +A +
Sbjct: 504 S-------------PASQPMTRKARIWMAYRACHSSVRVGDTMNHSQMKDLLNRMAQSDF 550
Query: 794 PWNCPHGRPTMRHLVDLTTIRKN-IDEN 820
PWNCPHGRPT + L +N ++EN
Sbjct: 551 PWNCPHGRPTWCEIWSLQENSQNSLEEN 578
>gi|84784024|gb|ABC61977.1| PMS1-like protein [Trichomonas vaginalis]
Length = 585
Score = 113 bits (283), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 107/208 (51%), Gaps = 19/208 (9%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLT 673
F M++IGQ+N FII K D++ +DQHAA E NFE+L + + Q L+ P+ + T
Sbjct: 389 FKDMEIIGQWNQSFIITKYGCDIYAIDQHAAMEAQNFEKLRKKCSIQSQRLISPIVISAT 448
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
P+E A ++ G+ + +++ +K +P + G +D+ +LI+ L +
Sbjct: 449 PQEISAAEECKQKCKEFGYDYDISDNSI-----HVKKIPSITTVATGSDDLLELITMLHE 503
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNS 793
+ A + R +A RAC SS+ +GD + ++M+ +L +A +
Sbjct: 504 S-------------PASQPMTRKARIWMAYRACHSSVRVGDTMNHSQMKDLLNRMAQSDF 550
Query: 794 PWNCPHGRPTMRHLVDLTTIRKN-IDEN 820
PWNCPHGRPT + L +N ++EN
Sbjct: 551 PWNCPHGRPTWCEIWSLQENSQNSLEEN 578
>gi|68071917|ref|XP_677872.1| mismatch repair protein [Plasmodium berghei strain ANKA]
gi|56498149|emb|CAI04678.1| mismatch repair protein pms1 homologue, putative [Plasmodium berghei]
Length = 1075
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 134/278 (48%), Gaps = 73/278 (26%)
Query: 609 FRKEDFGRMKVIGQFNLGFIIGKLD----------------------------------Q 634
F+ F ++K+ GQFN GFII K+D
Sbjct: 749 FKSNLFKKLKICGQFNKGFIISKIDLLYFKNGNSKSENVKMENNRNEAEENEYIERKNNY 808
Query: 635 DLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSL 694
LFI+DQHAADEK NFE+ ++ + Q L+ ++L+L+P + + + I +NGF +
Sbjct: 809 ALFIIDQHAADEKSNFEKYNKIFTMKSQKLINKIELELSPAQIHIIEKNFVIFLRNGFEI 868
Query: 695 E--EDP--------------------HALAGLRFRLKAVP-FSKKITFGVEDVKDLISTL 731
E ++P AL ++ L ++P F+ KI V D L+ L
Sbjct: 869 EIIDEPINKKRKINNDENMDNNIINEEALMEMKVYLLSLPVFNGKI-LEVVDFMSLLYHL 927
Query: 732 ADN------QGECSIISSYKMDTADSVC--------PSRVRAMLASRACRSSIMIGDALG 777
++N Q + S + + K T ++ P +V +LAS+ACR+++M+G L
Sbjct: 928 SNNPIIFDKQIDGSFLKNNKKLTDNTEMWFNYNFPRPQKVWKILASKACRNAVMVGKTLN 987
Query: 778 RNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRK 815
+EM I + L+ L +PWN PHGRPT++++++ I+K
Sbjct: 988 ISEMITIKKKLSVLKNPWN-PHGRPTIKYIINNIEIQK 1024
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 102/174 (58%), Gaps = 13/174 (7%)
Query: 84 LCQAYALIAKGVRFVCTNTTG-----KNVKSVVLKTQGSSSLKDNIITVFGM-NIYNCLE 137
L Q YA+I ++F+ N KN+ ++ T GS +K N ++FG NI N ++
Sbjct: 176 LMQQYAIIYHEIKFMIFNVVTQKGCTKNMNMLI--TNGSDDIKKNFYSIFGKKNIGNLID 233
Query: 138 PVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPK-VSKLVNELYKGANSR 196
K+++ V+G++S SGR D Q++++N RP+ + K V+K++N +Y+ NSR
Sbjct: 234 --LNIKNENWSVKGYIS--DSNSGRRDKDLQFYYMNSRPIHVIKNVNKIINTIYREFNSR 289
Query: 197 QYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASY 250
YPI I N + ++ D+NVTPDKR+VFF+ E + ++ L ++ +P +++
Sbjct: 290 LYPIIICNILSDSKNIDINVTPDKREVFFTFENELCEEIKTELIKLLTPKTSNF 343
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 44/66 (66%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ I +H IC+ QVI LS+ VKELVENS+DAGAT I++ L E G + +V DNG G
Sbjct: 3 IKSIGDESIHNICSSQVIFTLSNVVKELVENSIDAGATEIKVKLVENGIKLIEVNDNGNG 62
Query: 72 ISPNNF 77
I NF
Sbjct: 63 IKKINF 68
>gi|156045193|ref|XP_001589152.1| hypothetical protein SS1G_09785 [Sclerotinia sclerotiorum 1980]
gi|154694180|gb|EDN93918.1| hypothetical protein SS1G_09785 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 912
Score = 112 bits (281), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 98/197 (49%), Gaps = 22/197 (11%)
Query: 88 YALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFG---------MNIYNCLEP 138
YA I G++F + K K+ + T+G+ + ++NI+ VFG M++ LEP
Sbjct: 156 YACIQTGIKFTVSQQAAKGKKTTIFSTKGNPTTRENIVNVFGAKTLTQLISMDLRLELEP 215
Query: 139 VA----------ICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNE 188
+ + ++ G +S+P G GR DRQ FVN RP LP+V+K NE
Sbjct: 216 TSGPGQRWSTGNDGGTKDIRIIGHISRPASGEGRQTPDRQMLFVNSRPCGLPQVAKAFNE 275
Query: 189 LYK---GANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSP 245
+YK G S Q P N + T DVNV+PDKR + D+ +L L+ L E++
Sbjct: 276 VYKSYNGWGSTQSPFIFANIELDTHLYDVNVSPDKRTILLHDQSRMLENLKMALAELFES 335
Query: 246 NNASYSVNKVEQLIEPE 262
+ + V+++ +P+
Sbjct: 336 QDHTMPVSQLPAQKQPQ 352
Score = 72.8 bits (177), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 47/81 (58%), Gaps = 13/81 (16%)
Query: 600 AATTELERLFRKEDFGRMKVIGQFNLGFIIG-------------KLDQDLFIVDQHAADE 646
A L K DF +MK+IGQFNLGFI+ + ++FI+DQH++DE
Sbjct: 818 GAEKRLSLTISKSDFAKMKIIGQFNLGFILASKAPESTSENGGIQTADNVFIIDQHSSDE 877
Query: 647 KYNFERLSQSTVLNQQPLLRP 667
KYNFERL +T++ Q L+ P
Sbjct: 878 KYNFERLQATTIVQSQRLVYP 898
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 35/47 (74%)
Query: 36 VKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFKVRAV 82
VKELVENSLDAGATSI++ K G E +V DNG GISP+N+ A+
Sbjct: 3 VKELVENSLDAGATSIDVRFKNQGLEAIEVQDNGGGISPHNYDTLAL 49
>gi|70950630|ref|XP_744622.1| mismatch repair protein [Plasmodium chabaudi chabaudi]
gi|56524651|emb|CAH78788.1| mismatch repair protein pms1 homologue, putative [Plasmodium chabaudi
chabaudi]
Length = 1094
Score = 112 bits (280), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 131/285 (45%), Gaps = 82/285 (28%)
Query: 609 FRKEDFGRMKVIGQFNLGFIIGKLD--------------------------------QDL 636
F+ F ++K+ GQFN GFII K+D L
Sbjct: 763 FKSNLFNKLKICGQFNKGFIISKIDLLYFKNETEENATNETDENETDENEYIERKNNYAL 822
Query: 637 FIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLE- 695
FI+DQHAADEK NFE+ ++ + Q L+ ++L+L+P + + ++ I +NGF +E
Sbjct: 823 FIIDQHAADEKSNFEKYNKIFTMKSQKLINKIELELSPAQIHIIEKNLVIFLRNGFEIEI 882
Query: 696 -EDP--------------------------HALAGLRFRLKAVP-FSKKITFGVEDVKDL 727
E+P L ++ L ++P F+ KI +V D
Sbjct: 883 VEEPINKKRKINKDVHVGNFENAENDIPDEETLVQIKVYLLSLPVFNGKIL----EVVDF 938
Query: 728 ISTLA---------DNQGECSIISSYKMDTADSVC--------PSRVRAMLASRACRSSI 770
+S L D + S + T ++ P +V +LAS+ACR+++
Sbjct: 939 MSLLYHLNNHPIIFDKGIDDSFLKDKSKLTENTGTWFNYNFPRPQKVWRILASKACRNAV 998
Query: 771 MIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRK 815
M+G L +EM I + L+ L +PWNCPHGRPT++++++ ++K
Sbjct: 999 MVGKPLNISEMITIKKKLSVLQNPWNCPHGRPTIKYVINNIEVQK 1043
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 94/166 (56%), Gaps = 7/166 (4%)
Query: 84 LCQAYALIAKGVRFVCTNTT---GKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVA 140
L Q YA+I ++F+ N G +L T GS +K N ++FG L +
Sbjct: 176 LMQQYAIIYHEIKFMIFNIVTQKGSTKNMNMLITNGSDDIKKNFYSIFGKKTIGNLIDLN 235
Query: 141 ICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPK-VSKLVNELYKGANSRQYP 199
I K+++ V+G++S SGR D Q++++N RP+ + K V+K++N +Y+ NSR YP
Sbjct: 236 I-KNENWLVKGYIS--DSNSGRRDKDLQFYYMNSRPIHVIKNVNKIINTIYREFNSRLYP 292
Query: 200 IAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSP 245
I I N I + D+NVTPDKR+VFF+ E + ++ L ++ +P
Sbjct: 293 IIICNIISDAKNIDINVTPDKREVFFTFENELCEQIKIELIKLLTP 338
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 45/67 (67%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ I +H IC+ QVI LS+ VKELVENS+DAGAT I++ L E G + +V DNG G
Sbjct: 3 IKSIGDESIHNICSSQVIFTLSNVVKELVENSIDAGATEIKVKLVENGIKLIEVSDNGNG 62
Query: 72 ISPNNFK 78
I NF+
Sbjct: 63 IKKINFE 69
>gi|347840712|emb|CCD55284.1| hypothetical protein [Botryotinia fuckeliana]
Length = 734
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 100/197 (50%), Gaps = 22/197 (11%)
Query: 88 YALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFG---------MNIYNCLEP 138
YA I G++F + K K+ + T+G+ + ++NI+ VFG M++ LEP
Sbjct: 181 YACIQTGIKFTVSQQAAKGKKTTIFSTKGNPTTRENIVNVFGAKTLAQLIPMDLRLELEP 240
Query: 139 VA------ICKSDS----CKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNE 188
+ ++D ++ G +S+P G GR DRQ FFVN RP LP+V+K NE
Sbjct: 241 TSGPSQRRSTQNDGDTKDIRIIGHISRPATGEGRQTPDRQMFFVNSRPCGLPQVAKAFNE 300
Query: 189 LYK---GANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSP 245
+YK G S Q P N + T DVNV+PDKR + D+ +L L+ L ++
Sbjct: 301 VYKSYNGWGSTQSPFIFANIELDTHLYDVNVSPDKRTILLHDQSRMLENLKTALAGLFEG 360
Query: 246 NNASYSVNKVEQLIEPE 262
+ + V+++ +P+
Sbjct: 361 QDHTIPVSQLLAQKQPQ 377
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 51/72 (70%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
TI+PI +H+I +GQVI DL S VKELVENSLDAGATS+++ K G E +V DNG
Sbjct: 3 TIKPIEGRTIHQIQSGQVIVDLCSVVKELVENSLDAGATSVDVRFKNQGLEAIEVQDNGG 62
Query: 71 GISPNNFKVRAV 82
GISP N+ A+
Sbjct: 63 GISPQNYDTLAL 74
>gi|392588691|gb|EIW78023.1| DNA mismatch repair protein MutL [Coniophora puteana RWD-64-598
SS2]
Length = 375
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 98/184 (53%), Gaps = 27/184 (14%)
Query: 80 RAVFLCQAYALIA-----KGVRFVCTNT--TGKNVKSVVLKTQGSSSLKDNIITVFGMNI 132
+A+ L AYAL+ +GVR TNT G K+V L+T G S+K + ++G
Sbjct: 186 KALNLLNAYALVPCTKENRGVRLTVTNTPEGGCVRKAVQLRTDGVPSIKSSATALWGSRA 245
Query: 133 YNCL------------------EPVAICKSDSCKVE--GFLSKPGQGSGRNLGDRQYFFV 172
+ + + + + +S + V+ G +SK SGR DRQ+FFV
Sbjct: 246 LDNVVDLELEFEVETEKAVLRRQKLTVIRSGTTHVQVRGLISKFAVNSGRTTTDRQFFFV 305
Query: 173 NDRPVDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSIL 232
N RP + KV K NE+Y+ N+ Q P + +FI+PT ACD+NV+PDKR +F E ++L
Sbjct: 306 NGRPYNPSKVQKAFNEIYRSFNANQSPFIVADFILPTHACDINVSPDKRTIFLHSENNLL 365
Query: 233 HALR 236
AL+
Sbjct: 366 EALK 369
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 52/70 (74%)
Query: 8 NSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVD 67
++ I+ I+ VHRI +GQV+ DL +A+KELVENSLDAGAT+IE+ YG + +V+D
Sbjct: 11 DAAAIKAIDSHSVHRITSGQVVIDLQTAIKELVENSLDAGATNIEVRFHNYGLKLIEVID 70
Query: 68 NGCGISPNNF 77
NG GI+P ++
Sbjct: 71 NGSGIAPADY 80
>gi|336369195|gb|EGN97537.1| hypothetical protein SERLA73DRAFT_57791 [Serpula lacrymans var.
lacrymans S7.3]
Length = 383
Score = 110 bits (276), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 93/187 (49%), Gaps = 36/187 (19%)
Query: 80 RAVFLCQAYALIA-----KGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFG-MNIY 133
+A+ L AYAL+ KG+R TN K++ LKT GS S + ++ ++G +
Sbjct: 183 KALNLLYAYALVPCAKADKGIRLTVTNQPDGGRKTLQLKTDGSPSTRASVTALWGPKALD 242
Query: 134 NCLE------------------------PVAICKSDSCKVEGFLSKPGQGSGRNLGDRQY 169
N +E P IC V G +SK GR DRQ+
Sbjct: 243 NVVELDLTFQMETEKAVLRRQSTGDGDSPTTIC------VRGLISKFSPSCGRATTDRQF 296
Query: 170 FFVNDRPVDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDEC 229
FF+N RP PK+ K NE+Y+ N+ Q P + +F++PT CD+NV+PDKR +F E
Sbjct: 297 FFINGRPFSPPKIQKAFNEVYRSFNANQSPFIVADFVIPTHTCDINVSPDKRTIFLHSEA 356
Query: 230 SILHALR 236
+++ AL+
Sbjct: 357 NLIQALK 363
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 50/70 (71%)
Query: 8 NSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVD 67
+S I+PI+ +HRI +GQV+ DL +AVKELVENSLDA A SIE+ YG + +V+D
Sbjct: 9 SSGAIKPIDTQSIHRITSGQVVVDLQTAVKELVENSLDAQAKSIEVRFHNYGLKSIEVID 68
Query: 68 NGCGISPNNF 77
NG GI +++
Sbjct: 69 NGSGIKADDY 78
>gi|195172652|ref|XP_002027110.1| GL20044 [Drosophila persimilis]
gi|194112923|gb|EDW34966.1| GL20044 [Drosophila persimilis]
Length = 645
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 90/182 (49%), Gaps = 37/182 (20%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFG-------------- 129
+ QAY L+ KGVR +C+N T K K+VVL+T G+ + NI +FG
Sbjct: 193 ILQAYCLVTKGVRIICSNQTPKGAKTVVLQTHGAQDVLANISAIFGARQVADIVPLKSPF 252
Query: 130 -------MNIYNCLEPVAICKSDSC----------------KVEGFLSKPGQGSGRNLGD 166
+ + LE A +C ++EG++S G+GR+ D
Sbjct: 253 EKGQLSEVGLRAELESSADAADTTCTQFSAEDVERLNQADFRLEGYISSCRHGAGRSSRD 312
Query: 167 RQYFFVNDRPVDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFS 226
RQ+FFVN RP D ++K++NE Y N +Q P +N I DVN+TPDKR++ +
Sbjct: 313 RQFFFVNARPCDPKNIAKVINETYHRYNVQQQPFIYLNIITARSDVDVNLTPDKRQLLLN 372
Query: 227 DE 228
+E
Sbjct: 373 NE 374
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 56/84 (66%), Gaps = 8/84 (9%)
Query: 2 DVETPTNSPT------IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIAL 55
DVE P +PT I+ I+K VH+IC+GQV+ L+ AVKELVENS+DAGAT +EI +
Sbjct: 7 DVELP--APTTAVSGQIKAISKDTVHKICSGQVVLSLAVAVKELVENSIDAGATLVEIKM 64
Query: 56 KEYGEEWFQVVDNGCGISPNNFKV 79
K+ G + +V DNG G+ N +
Sbjct: 65 KDQGLQGVEVSDNGSGVVEANLEA 88
>gi|253747389|gb|EET02113.1| Pms1-like protein [Giardia intestinalis ATCC 50581]
Length = 731
Score = 108 bits (271), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 116/225 (51%), Gaps = 31/225 (13%)
Query: 609 FRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQST--VLNQQPLLR 666
FR+ +F +K I Q+N F++ +LD F++DQHAA E F + L++Q +
Sbjct: 492 FRQSNFANLKYICQYNQSFLLAQLDDTFFLIDQHAAHEAKYFSDYWHNPQCYLSKQKTIA 551
Query: 667 PLKLDLTPEE-----EVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGV 721
PLKL+L P+E E ++S DII GF L ++G L A P T
Sbjct: 552 PLKLELRPDEKLCLEEFLSSTLFDII---GFELR-----ISGEYALLSAFPSLFGQTLTE 603
Query: 722 EDVKDLISTLADNQGECSIISSYKMDTAD--------------SVCPSRVRAMLASRACR 767
+D ++ + L + E I S ++ A+ ++ P R+R + AS++C+
Sbjct: 604 DDFREYLLLLYGHTREY-IESILRISEAEEKSREKMLVRILHNNIAPPRIRKIFASKSCK 662
Query: 768 SSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTT 812
+S+ +GD L + ++I+ LA P+NCPHGRP +R L DLT+
Sbjct: 663 ASVRLGDPLLDSTAKRIIADLAYCEKPFNCPHGRPVLRFL-DLTS 706
Score = 43.1 bits (100), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 34/70 (48%)
Query: 3 VETPTNSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEW 62
E T + IR ++ I A Q D + L+ENSLDAGAT I + L+ G
Sbjct: 5 TEQRTGTGRIRSLSASDSRLILATQQFPDPHRVISALLENSLDAGATEIAVVLEGAGIRS 64
Query: 63 FQVVDNGCGI 72
V DNG GI
Sbjct: 65 ITVNDNGHGI 74
>gi|110801747|ref|YP_698494.1| DNA mismatch repair protein [Clostridium perfringens SM101]
gi|123341838|sp|Q0STR3.1|MUTL_CLOPS RecName: Full=DNA mismatch repair protein MutL
gi|110682248|gb|ABG85618.1| DNA mismatch repair protein MutL [Clostridium perfringens SM101]
Length = 674
Score = 108 bits (270), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 106/202 (52%), Gaps = 21/202 (10%)
Query: 606 ERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQ---Q 662
ER++R+ F ++KVIGQFN +I+ + D L+++DQHAA EK FE+ S + Q
Sbjct: 475 ERIYREAKFPKLKVIGQFNKTYILAEYDSTLYLIDQHAAHEKILFEKYSSDIAKKKVEIQ 534
Query: 663 PLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVE 722
PL+ PL + L E+ + + +I K GF + + R++ VP+ E
Sbjct: 535 PLMIPLVVTLPTEDYLYYDENKEIFEKAGFKISD----FGDNSIRIEEVPYFLDKLNPTE 590
Query: 723 DVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQ 782
+ +I+ L KM T ++V + +AS +CR+++ D L EM+
Sbjct: 591 LIISMINNLK------------KMGTGETVEVKYNK--IASMSCRAAVKANDVLSILEME 636
Query: 783 KILEHLADLNSPWNCPHGRPTM 804
++E L +N P++CPHGRPT+
Sbjct: 637 NLIEDLRYINDPFHCPHGRPTI 658
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 52/93 (55%), Gaps = 2/93 (2%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I +N ++I AG+V++ SS VKELVENSLDAGA +I I ++ GE +++D+G G
Sbjct: 4 INILNADTANKIAAGEVVERPSSVVKELVENSLDAGAKNITIEIQNGGESLIKIIDDGSG 63
Query: 72 ISPNNFKVRAVFLCQAYALIAKGVRFVCTNTTG 104
+ P + V F A + I NT G
Sbjct: 64 VHPED--VEKAFNPHATSKIKDTYDIFSINTLG 94
>gi|422345813|ref|ZP_16426727.1| DNA mismatch repair protein mutL [Clostridium perfringens
WAL-14572]
gi|373227478|gb|EHP49792.1| DNA mismatch repair protein mutL [Clostridium perfringens
WAL-14572]
Length = 677
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 112/203 (55%), Gaps = 23/203 (11%)
Query: 606 ERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQ---Q 662
E ++++ F ++KVIGQFN +I+ + D L+++DQHAA EK FE+ S + Q
Sbjct: 478 ETIYKEAKFPKLKVIGQFNKTYILAEYDSTLYLIDQHAAHEKILFEKYSSDIAKKKVEIQ 537
Query: 663 PLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVP-FSKKITFGV 721
PL+ PL ++L+ E+ + + +I K GF + + R++ VP F K+
Sbjct: 538 PLMIPLVVNLSTEDYLYYDENKEIFEKAGFKISD----FGDNSIRIEEVPYFLDKL---- 589
Query: 722 EDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEM 781
+ +LI+++ +N KM T ++V + +AS +CR+++ D L EM
Sbjct: 590 -NPTELITSMINNLK--------KMGTGETVEVKYNK--IASMSCRAAVKANDVLSILEM 638
Query: 782 QKILEHLADLNSPWNCPHGRPTM 804
+ ++E L +N P++CPHGRPT+
Sbjct: 639 ENLIEDLRYINDPFHCPHGRPTI 661
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 52/93 (55%), Gaps = 2/93 (2%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I +N ++I AG+V++ SS VKELVENSLDAGA +I I ++ GE +++D+G G
Sbjct: 4 INILNADTANKIAAGEVVERPSSVVKELVENSLDAGAKNITIEIQNGGESLIKIIDDGSG 63
Query: 72 ISPNNFKVRAVFLCQAYALIAKGVRFVCTNTTG 104
+ P + V F A + I NT G
Sbjct: 64 VHPED--VEKAFNPHATSKIKDTYDIFSINTLG 94
>gi|195583626|ref|XP_002081618.1| GD25619 [Drosophila simulans]
gi|194193627|gb|EDX07203.1| GD25619 [Drosophila simulans]
Length = 713
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 92/182 (50%), Gaps = 37/182 (20%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV---- 139
+ QAY L+ KGVR +C+N T K K+VVL+T G + NI +FG L P+
Sbjct: 199 ILQAYCLVTKGVRILCSNHTPKGAKTVVLQTHGDQEVMANISAIFGARQAADLVPLKSPF 258
Query: 140 -------AICKSD----------SC----------------KVEGFLSKPGQGSGRNLGD 166
A ++D +C +++GF+S G+GR+ D
Sbjct: 259 GQGQLTEAELRADLEYGADVADTTCPQISTEDVERLNQADFQLDGFISSCRHGAGRSSRD 318
Query: 167 RQYFFVNDRPVDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFS 226
RQ+FFVN RP D ++K++NE+Y N +Q P +N I DVN+TPDKR++ +
Sbjct: 319 RQFFFVNSRPCDPKNIAKVMNEIYHRYNVQQQPFIYLNIITARSDVDVNLTPDKRQLLIN 378
Query: 227 DE 228
+E
Sbjct: 379 NE 380
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 49/70 (70%)
Query: 9 SPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDN 68
S I+ I K VH+IC+GQV+ L+ AVKELVENS+DAGAT +EI LK+ G + +V DN
Sbjct: 24 SGQIKAIGKDTVHKICSGQVVLSLAVAVKELVENSIDAGATLVEIKLKDQGLQGVEVSDN 83
Query: 69 GCGISPNNFK 78
G G+ N +
Sbjct: 84 GSGVEEMNLE 93
>gi|168180372|ref|ZP_02615036.1| DNA mismatch repair protein [Clostridium botulinum NCTC 2916]
gi|226949040|ref|YP_002804131.1| DNA mismatch repair protein [Clostridium botulinum A2 str. Kyoto]
gi|254766164|sp|C1FNT8.1|MUTL_CLOBJ RecName: Full=DNA mismatch repair protein MutL
gi|182668696|gb|EDT80674.1| DNA mismatch repair protein [Clostridium botulinum NCTC 2916]
gi|226840747|gb|ACO83413.1| DNA mismatch repair protein MutL [Clostridium botulinum A2 str.
Kyoto]
Length = 666
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 104/192 (54%), Gaps = 23/192 (11%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLS---QSTVLNQQPLLRPLKLDLT 673
MK+IGQFN +I+ + D++L+I+DQHAA EK FE+ + + Q LL P+ ++L+
Sbjct: 478 MKIIGQFNNTYILIEKDKELYIIDQHAAHEKVLFEKFKSEIEKGYVISQILLSPVVIELS 537
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
+E + + DI + +GFS+E +K VP + G +V+DL +
Sbjct: 538 EDEFNIYEENKDIFKNSGFSVE----TFGECTINIKEVP----LILGKPNVEDLFMDIL- 588
Query: 734 NQGECSIISSYKMDTADSVCPSRVRA-MLASRACRSSIMIGDALGRNEMQKILEHLADLN 792
Y + S S ++ +A+ AC+S++ D L E++K++E++ LN
Sbjct: 589 ----------YNLKNMKSKETSTIKYNAIATLACKSAVKANDNLKEEEIKKLIENMLTLN 638
Query: 793 SPWNCPHGRPTM 804
+P+ CPHGRPTM
Sbjct: 639 NPYTCPHGRPTM 650
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 21 HRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFKVR 80
++I AG+VI+ S VKELVENS+DAGA +I I +++ G+ +++D+G GI P ++
Sbjct: 13 NKIAAGEVIERPFSVVKELVENSIDAGAKNITIEIEDGGQNLIKIIDDGEGIYP--IDIK 70
Query: 81 AVFLCQAYALI 91
FL A + I
Sbjct: 71 NAFLPHATSKI 81
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 93/238 (39%), Gaps = 32/238 (13%)
Query: 26 GQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPN--------NF 77
G+ + +SS K +++ +D+ EI ++ E+ + D GC + N
Sbjct: 97 GEALASISSVSKTKLKSRVDSYNFGKEIYIEGGKIEYLK--DTGCNVGTTIEVSDLFYNV 154
Query: 78 KVRAVFLCQA-------------YALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNI 124
R FL A + L + F N +++KS G+ +LKD+I
Sbjct: 155 PARLKFLKSARSDSSSISDIVNRFILAHPDISFNLINKGKQSIKSY-----GTGNLKDSI 209
Query: 125 ITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSK 184
V+ I L K D V GF+ KP R Q FVN R V ++
Sbjct: 210 RCVYNKTISENLINFESHK-DIISVYGFIGKPE--ISRKSRTNQSIFVNKRYVKSKFITA 266
Query: 185 LVNELYKG-ANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQE 241
V +K YP ++ + DVNV P K +V F DE ++ + + + E
Sbjct: 267 AVENAFKSFLTVNSYPFFVIFIDIFPEYIDVNVHPTKSEVKFKDERAMFKTIFDAVHE 324
>gi|421837498|ref|ZP_16271661.1| DNA mismatch repair protein [Clostridium botulinum CFSAN001627]
gi|409740344|gb|EKN40646.1| DNA mismatch repair protein [Clostridium botulinum CFSAN001627]
Length = 666
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 104/192 (54%), Gaps = 23/192 (11%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLS---QSTVLNQQPLLRPLKLDLT 673
MK+IGQFN +I+ + D++L+I+DQHAA EK FE+ + + Q LL P+ ++L+
Sbjct: 478 MKIIGQFNNTYILIEKDKELYIIDQHAAHEKVLFEKFKSEIEKGYVISQILLSPVVIELS 537
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
+E + + DI + +GFS+E +K VP + G +V+DL +
Sbjct: 538 EDEFNIYEENKDIFKNSGFSVE----TFGECTINIKEVP----LILGKPNVEDLFMDIL- 588
Query: 734 NQGECSIISSYKMDTADSVCPSRVRA-MLASRACRSSIMIGDALGRNEMQKILEHLADLN 792
Y + S S ++ +A+ AC+S++ D L E++K++E++ LN
Sbjct: 589 ----------YNLKNMKSKETSTIKYNAIATLACKSAVKANDNLKEEEIKKLIENMLTLN 638
Query: 793 SPWNCPHGRPTM 804
+P+ CPHGRPTM
Sbjct: 639 NPYTCPHGRPTM 650
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 21 HRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFKVR 80
++I AG+VI+ S VKELVENS+DAGA +I I +++ G+ +++D+G GI P ++
Sbjct: 13 NKIAAGEVIERPFSVVKELVENSIDAGAKNITIEIEDGGQNLIKIIDDGEGIYP--IDIK 70
Query: 81 AVFLCQAYALI 91
FL A + I
Sbjct: 71 NAFLPHATSKI 81
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 93/238 (39%), Gaps = 32/238 (13%)
Query: 26 GQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPN--------NF 77
G+ + +SS K +++ +D+ EI ++ E+ + D GC + N
Sbjct: 97 GEALASISSVSKTKLKSRVDSYNFGKEIYIEGGKIEYLK--DTGCNVGTTIEVSDLFYNV 154
Query: 78 KVRAVFLCQA-------------YALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNI 124
R FL A + L + F N +++KS G+ +LKD+I
Sbjct: 155 PARLKFLKSARSDSSSISDIVNRFILAHPDISFNLINKGKQSIKSY-----GTGNLKDSI 209
Query: 125 ITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSK 184
V+ I L K D V GF+ KP R Q FVN R V ++
Sbjct: 210 RCVYNKTISENLINFESHK-DIISVYGFIGKPE--ISRKSRTNQSIFVNKRYVKSKFITA 266
Query: 185 LVNELYKG-ANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQE 241
V +K YP ++ + DVNV P K +V F DE ++ + + + E
Sbjct: 267 AVENAFKSFLTVNSYPFFVIFIDIFPEYIDVNVHPTKSEVKFKDERAMFKTIFDAVHE 324
>gi|168214982|ref|ZP_02640607.1| DNA mismatch repair protein MutL [Clostridium perfringens CPE str.
F4969]
gi|170713599|gb|EDT25781.1| DNA mismatch repair protein MutL [Clostridium perfringens CPE str.
F4969]
Length = 674
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 110/203 (54%), Gaps = 23/203 (11%)
Query: 606 ERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTV---LNQQ 662
E ++R+ F +++VIGQFN +I+ + D L+++DQHAA EK FE+ S + Q
Sbjct: 475 EIIYREAKFPKLRVIGQFNKTYILAEYDSTLYLIDQHAAHEKILFEKYSSDIAKKRVEIQ 534
Query: 663 PLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVP-FSKKITFGV 721
PL+ PL + L E+ + + +I K GF + + R++ VP F K+
Sbjct: 535 PLMIPLVVTLPTEDYLYYDENKEIFEKAGFKISD----FGDNSIRIEEVPYFLDKL---- 586
Query: 722 EDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEM 781
+ +LI+++ +N KM T ++V + +AS +CR+++ D L EM
Sbjct: 587 -NPTELITSMINNLK--------KMGTGETVAVKYNK--IASMSCRAAVKANDVLSILEM 635
Query: 782 QKILEHLADLNSPWNCPHGRPTM 804
+ ++E L +N P++CPHGRPT+
Sbjct: 636 ENLIEDLRYINDPFHCPHGRPTI 658
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 52/93 (55%), Gaps = 2/93 (2%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I +N ++I AG+V++ SS VKELVENSLDAGA +I I ++ GE +++D+G G
Sbjct: 4 INILNADTANKIAAGEVVERPSSVVKELVENSLDAGAKNITIEIQNGGESLIKIIDDGSG 63
Query: 72 ISPNNFKVRAVFLCQAYALIAKGVRFVCTNTTG 104
I P + V F A + I NT G
Sbjct: 64 IHPED--VEKAFNPHATSKIKDTYDIFSINTLG 94
>gi|182626338|ref|ZP_02954093.1| DNA mismatch repair protein MutL [Clostridium perfringens D str.
JGS1721]
gi|177908357|gb|EDT70902.1| DNA mismatch repair protein MutL [Clostridium perfringens D str.
JGS1721]
Length = 674
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 111/203 (54%), Gaps = 23/203 (11%)
Query: 606 ERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQ---Q 662
E ++++ F ++KVIGQFN +I+ + D L+++DQHAA EK FE+ S + Q
Sbjct: 475 ETIYKEAKFPKLKVIGQFNKTYILAEYDSTLYLIDQHAAHEKILFEKYSSDIAKKKVEIQ 534
Query: 663 PLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVP-FSKKITFGV 721
PL+ PL ++L E+ + + +I K GF + + R++ VP F K+
Sbjct: 535 PLMIPLVVNLPTEDYLYYDENKEIFEKAGFKISD----FGDNSIRIEEVPYFLDKL---- 586
Query: 722 EDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEM 781
+ +LI+++ +N KM T ++V + +AS +CR+++ D L EM
Sbjct: 587 -NPTELITSMINNLK--------KMGTGETVEVKYNK--IASMSCRAAVKANDVLSILEM 635
Query: 782 QKILEHLADLNSPWNCPHGRPTM 804
+ ++E L +N P++CPHGRPT+
Sbjct: 636 ENLIEDLRYINDPFHCPHGRPTI 658
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 52/93 (55%), Gaps = 2/93 (2%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I +N ++I AG+V++ SS VKELVENSLDAGA +I I ++ GE +++D+G G
Sbjct: 4 INILNADTANKIAAGEVVERPSSVVKELVENSLDAGAKNITIEIQNGGESLIKIIDDGSG 63
Query: 72 ISPNNFKVRAVFLCQAYALIAKGVRFVCTNTTG 104
+ P + V F A + I NT G
Sbjct: 64 VHPED--VEKAFNPHATSKIKDTYDIFSINTLG 94
>gi|266618993|ref|ZP_06111928.1| DNA mismatch repair protein MutL [Clostridium botulinum Bf]
gi|263529157|gb|EEZ28463.1| DNA mismatch repair protein MutL [Clostridium botulinum Bf]
Length = 574
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 104/192 (54%), Gaps = 23/192 (11%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLS---QSTVLNQQPLLRPLKLDLT 673
MK+IGQFN +I+ + D++L+I+DQHAA EK FE+ + + Q LL P+ ++L+
Sbjct: 386 MKIIGQFNNTYILIEKDKELYIIDQHAAHEKVLFEKFKSEIEKGYVVSQILLSPVVIELS 445
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
+E + + DI + +GFS+E A +K VP + G +V++L +
Sbjct: 446 EDEFNIYEENKDIFKNSGFSVE----AFGECTINIKEVP----LILGKPNVENLFMDIL- 496
Query: 734 NQGECSIISSYKMDTADSVCPSRVRA-MLASRACRSSIMIGDALGRNEMQKILEHLADLN 792
Y + S S ++ +A+ AC+S++ D L E++K++E + LN
Sbjct: 497 ----------YNLKNMKSKETSTIKYNAIATLACKSAVKANDNLKEEEIKKLIEDMLILN 546
Query: 793 SPWNCPHGRPTM 804
+P+ CPHGRPTM
Sbjct: 547 NPYTCPHGRPTM 558
Score = 44.3 bits (103), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 97/235 (41%), Gaps = 26/235 (11%)
Query: 26 GQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPN--------NF 77
G+ + +SS K +++ +D+ EI ++ E+ + D GC + N
Sbjct: 5 GEALASISSVSKTKLKSRVDSYNFGKEIYIEGGKIEYLK--DTGCNVGTTIEVSDLFYNV 62
Query: 78 KVRAVFLCQAYA---LIAKGV-RFVCT------NTTGKNVKSVVLKTQGSSSLKDNIITV 127
R FL A + I+ V RF+ N K +S+ K+ G+ +LKD+I V
Sbjct: 63 PARLKFLKSARSDSSAISDIVNRFILAHPDISFNLINKGKQSI--KSYGTGNLKDSIRCV 120
Query: 128 FGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVN 187
+ I L K D V GF+ KP R Q FVN R V ++ V
Sbjct: 121 YNKTISENLINFENHK-DIISVYGFIGKPE--ISRKSRTNQSIFVNKRYVKSKFITAAVE 177
Query: 188 ELYKG-ANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQE 241
+K YP ++ + DVNV P K +V F DE ++ + + + E
Sbjct: 178 NAFKSFLTVNSYPFFVIFIDIFPEYIDVNVHPTKSEVKFKDERAMFKTIFDAVHE 232
>gi|237795208|ref|YP_002862760.1| DNA mismatch repair protein [Clostridium botulinum Ba4 str. 657]
gi|259509929|sp|C3KX34.1|MUTL_CLOB6 RecName: Full=DNA mismatch repair protein MutL
gi|229264105|gb|ACQ55138.1| DNA mismatch repair protein [Clostridium botulinum Ba4 str. 657]
Length = 666
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 104/192 (54%), Gaps = 23/192 (11%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLS---QSTVLNQQPLLRPLKLDLT 673
MK+IGQFN +I+ + D++L+I+DQHAA EK FE+ + + Q LL P+ ++L+
Sbjct: 478 MKIIGQFNNTYILIEKDKELYIIDQHAAHEKVLFEKFKSEIEKGYVVSQILLSPVVIELS 537
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
+E + + DI + +GFS+E A +K VP + G +V++L +
Sbjct: 538 EDEFNIYEENKDIFKNSGFSVE----AFGECTINIKEVP----LILGKPNVENLFMDIL- 588
Query: 734 NQGECSIISSYKMDTADSVCPSRVRA-MLASRACRSSIMIGDALGRNEMQKILEHLADLN 792
Y + S S ++ +A+ AC+S++ D L E++K++E + LN
Sbjct: 589 ----------YNLKNMKSKETSTIKYNAIATLACKSAVKANDNLKEEEIKKLIEDMLILN 638
Query: 793 SPWNCPHGRPTM 804
+P+ CPHGRPTM
Sbjct: 639 NPYTCPHGRPTM 650
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 48/71 (67%), Gaps = 2/71 (2%)
Query: 21 HRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFKVR 80
++I AG+VI+ S VKELVENS+DAGA +I I +++ G++ +++D+G GI P ++
Sbjct: 13 NKIAAGEVIERPFSVVKELVENSIDAGAKNITIEIEDGGQKLIKIIDDGEGIYP--IDIK 70
Query: 81 AVFLCQAYALI 91
FL A + I
Sbjct: 71 NAFLPHATSKI 81
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 97/235 (41%), Gaps = 26/235 (11%)
Query: 26 GQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPN--------NF 77
G+ + +SS K +++ +D+ EI ++ E+ + D GC + N
Sbjct: 97 GEALASISSVSKTKLKSRVDSYNFGKEIYIEGGKIEYLK--DTGCNVGTTIEVSDLFYNV 154
Query: 78 KVRAVFLCQAYA---LIAKGV-RFVCT------NTTGKNVKSVVLKTQGSSSLKDNIITV 127
R FL A + I+ V RF+ N K +S+ K+ G+ +LKD+I V
Sbjct: 155 PARLKFLKSARSDSSAISDIVNRFILAHPDISFNLINKGKQSI--KSYGTGNLKDSIRCV 212
Query: 128 FGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVN 187
+ I L K D V GF+ KP R Q FVN R V ++ V
Sbjct: 213 YNKTISENLINFENHK-DIISVYGFIGKPE--ISRKSRTNQSIFVNKRYVKSKFITAAVE 269
Query: 188 ELYKG-ANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQE 241
+K YP ++ + DVNV P K +V F DE ++ + + + E
Sbjct: 270 NAFKSFLTVNSYPFFVIFIDIFPEYIDVNVHPTKSEVKFKDERAMFKTIFDAVHE 324
>gi|149046218|gb|EDL99111.1| similar to postmeiotic segregation increased 1, isoform CRA_a
[Rattus norvegicus]
Length = 830
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 119/263 (45%), Gaps = 18/263 (6%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
++ + V + + Q I + S VKEL+ENSLDAGA SI++ L+ YG + ++ DNG G
Sbjct: 1 MKQLPAATVRLLSSSQTITSVVSVVKELIENSLDAGANSIDVKLENYGFDKIEIRDNGAG 60
Query: 72 ISPNNFKVRAVFLCQA--------YALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDN 123
I + V AV + L G R ++V+ + +
Sbjct: 61 IKAVDVPVMAVKYYTSKISSHEDLQTLTTYGFRGEALGAICNVAEAVIWQKSRVPDHRMA 120
Query: 124 IITVFGMNIYNCLEPVA-ICKSDSCKVEGFLSKPG---QGSGRNLGDRQYFFVNDRPVDL 179
+++V G + +E V C+ + G K + + +R + F+N RPV
Sbjct: 121 LMSVLGTAVMGNMESVERYCEDSQIHLRGLFPKHDADHNSTSLSTPERSFIFINSRPVHQ 180
Query: 180 PKVSKLVNELYK----GANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHAL 235
+ KL+ Y ++R YPI + VP+ D+N+TPDK +V ++ S+L AL
Sbjct: 181 KDILKLIRHYYNLKCLKESTRLYPIFFLKIDVPSAEVDINLTPDKSQVLLQNKESVLIAL 240
Query: 236 REGLQEIYS--PNNASYSVNKVE 256
L Y P SY N+V+
Sbjct: 241 ENLLMTCYGPLPTTESYENNRVD 263
>gi|194754970|ref|XP_001959765.1| GF11871 [Drosophila ananassae]
gi|190621063|gb|EDV36587.1| GF11871 [Drosophila ananassae]
Length = 919
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 91/182 (50%), Gaps = 37/182 (20%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV---- 139
+ QAY L+ KGVR +C+N T K K+VVL+T + + NI ++FG L P+
Sbjct: 198 ILQAYCLVTKGVRILCSNQTPKGAKTVVLQTHSARDVLANISSIFGARQVADLVPLKSPF 257
Query: 140 -------AICKSD--------------------------SCKVEGFLSKPGQGSGRNLGD 166
A ++D ++EGF+S G+GR+ D
Sbjct: 258 EKGHLSEAGLRADLESSADAADTTLTQFSAEDVERLNQADFQLEGFISSCRHGAGRSSRD 317
Query: 167 RQYFFVNDRPVDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFS 226
RQ+FFVN RP D ++K++NE+Y N +Q P +N + DVN+TPDKR++ +
Sbjct: 318 RQFFFVNSRPCDPKNIAKVMNEIYHRYNVQQQPFIYLNIVTARSDVDVNLTPDKRQLLIN 377
Query: 227 DE 228
+E
Sbjct: 378 NE 379
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 51/74 (68%)
Query: 5 TPTNSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQ 64
T S I+ I K VH+IC+GQV+ L+ AVKELVENS+DAGAT +EI LK+ G + +
Sbjct: 19 TTAASGQIKAIAKDTVHKICSGQVVLSLAVAVKELVENSIDAGATLVEIKLKDQGLQGVE 78
Query: 65 VVDNGCGISPNNFK 78
V DNG G+ +N +
Sbjct: 79 VSDNGYGVEESNLE 92
>gi|153938478|ref|YP_001391054.1| DNA mismatch repair protein [Clostridium botulinum F str.
Langeland]
gi|384462087|ref|YP_005674682.1| DNA mismatch repair protein MutL [Clostridium botulinum F str.
230613]
gi|166232085|sp|A7GE44.1|MUTL_CLOBL RecName: Full=DNA mismatch repair protein MutL
gi|152934374|gb|ABS39872.1| DNA mismatch repair protein MutL [Clostridium botulinum F str.
Langeland]
gi|295319104|gb|ADF99481.1| DNA mismatch repair protein MutL [Clostridium botulinum F str.
230613]
Length = 666
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 106/193 (54%), Gaps = 25/193 (12%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQ----QPLLRPLKLDL 672
MK+IGQFN +I+ + D++L+I+DQHAA EK FE+ +S + N+ Q LL P+ ++L
Sbjct: 478 MKIIGQFNNTYILIEKDKELYIIDQHAAHEKVLFEKF-KSEIENRYVISQILLSPVVIEL 536
Query: 673 TPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLA 732
+ +E + + DI + +GFS+E +K VP + G +V++L +
Sbjct: 537 SEDEFNIYEENKDIFKNSGFSVE----TFGEYTINIKEVP----LILGKPNVENLFMDIL 588
Query: 733 DNQGECSIISSYKMDTADSVCPSRVRA-MLASRACRSSIMIGDALGRNEMQKILEHLADL 791
Y + S S ++ +A+ AC+S++ D L E++K++E + L
Sbjct: 589 -----------YNLKNMKSKETSTIKYNAIATLACKSAVKANDNLKEEEIKKLIEDMLIL 637
Query: 792 NSPWNCPHGRPTM 804
N+P+ CPHGRPTM
Sbjct: 638 NNPYTCPHGRPTM 650
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 48/71 (67%), Gaps = 2/71 (2%)
Query: 21 HRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFKVR 80
++I AG+VI+ S VKELVENS+DAGA +I I +++ G++ +++D+G GI P ++
Sbjct: 13 NKIAAGEVIERPFSVVKELVENSIDAGAKNITIEIEDGGQKLIKIIDDGEGIYP--IDIK 70
Query: 81 AVFLCQAYALI 91
FL A + I
Sbjct: 71 NAFLPHATSKI 81
Score = 43.1 bits (100), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 92/237 (38%), Gaps = 32/237 (13%)
Query: 26 GQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPN--------NF 77
G+ + +SS K +++ +D+ EI ++ E+ + D GC + N
Sbjct: 97 GEALASISSVSKTKLKSRVDSYNFGKEIYIEGGKIEYLK--DTGCNVGTTIEVSDLFYNV 154
Query: 78 KVRAVFLCQA-------------YALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNI 124
R FL A + L + F N +++KS G+ +LKD+I
Sbjct: 155 PARLKFLKSARSDSSSISDIVNRFILAHPDISFNLINKGKQSIKSY-----GTGNLKDSI 209
Query: 125 ITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSK 184
V+ I L K D V GF+ KP R Q FVN R V ++
Sbjct: 210 RCVYNKTISENLINFESHK-DIISVYGFIGKPE--ISRKSRTNQSIFVNKRYVKSKFITA 266
Query: 185 LVNELYKG-ANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQ 240
V +K YP ++ + DVNV P K +V F DE ++ + + +
Sbjct: 267 AVENAFKSFLTVNSYPFFVIFIDIFPEYIDVNVHPTKSEVKFKDERAMFKTIFDAVH 323
>gi|207341702|gb|EDZ69686.1| YNL082Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 417
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 94/183 (51%), Gaps = 22/183 (12%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAIC- 142
+ Q YA+I ++F N T K K+++L T +SS++ NI +VFG LE V +
Sbjct: 175 VIQGYAIINAAIKFSVWNITPKGKKNLILSTMRNSSMRKNISSVFGAGGMRGLEEVDLVL 234
Query: 143 ------------KSD---------SCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPK 181
+D +V+G++S+ G GRN DRQ+ +VN RPV+
Sbjct: 235 DLNPFKNRMLGKYTDDPDFLDLDYKIRVKGYISQNSFGCGRNSKDRQFIYVNKRPVEYST 294
Query: 182 VSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQE 241
+ K NE+YK N+ Q+P +N +P DVNVTPDKR + +E +++ + L +
Sbjct: 295 LLKCCNEVYKTFNNVQFPAVFLNLELPMSLIDVNVTPDKRVILLHNERAVIDIFKTTLSD 354
Query: 242 IYS 244
Y+
Sbjct: 355 YYN 357
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 50/71 (70%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I IN VHRI +GQVI DL++AVKELV+NS+DA A IEI K+YG E + DNG G
Sbjct: 4 IHQINDIDVHRITSGQVITDLTTAVKELVDNSIDANANQIEIIFKDYGLESIECSDNGDG 63
Query: 72 ISPNNFKVRAV 82
I P+N++ A+
Sbjct: 64 IDPSNYEFLAL 74
>gi|18310138|ref|NP_562072.1| DNA mismatch repair protein [Clostridium perfringens str. 13]
gi|20455087|sp|Q8XL86.1|MUTL_CLOPE RecName: Full=DNA mismatch repair protein MutL
gi|18144817|dbj|BAB80862.1| DNA mismatch repair protein [Clostridium perfringens str. 13]
Length = 674
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 110/203 (54%), Gaps = 23/203 (11%)
Query: 606 ERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQ---Q 662
E ++R+ F +++VIGQFN +I+ + D L+++DQHAA EK FE+ S + Q
Sbjct: 475 EIIYREAKFPKLRVIGQFNKTYILAEYDSTLYLIDQHAAHEKILFEKYSSDIAKKKVEIQ 534
Query: 663 PLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVP-FSKKITFGV 721
PL+ PL + L E+ + + +I K GF + + R++ VP F K+
Sbjct: 535 PLMIPLVVTLPTEDYLYYDENKEIFEKAGFKISD----FGDNSIRIEEVPYFLDKL---- 586
Query: 722 EDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEM 781
+ +LI+++ +N KM T ++V + +AS +CR+++ D L EM
Sbjct: 587 -NPTELITSMINNLK--------KMGTGETVEVKYNK--IASMSCRAAVKANDVLSILEM 635
Query: 782 QKILEHLADLNSPWNCPHGRPTM 804
+ ++E L +N P++CPHGRPT+
Sbjct: 636 ENLIEDLRYINDPFHCPHGRPTI 658
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 52/93 (55%), Gaps = 2/93 (2%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I +N ++I AG+V++ SS VKELVENSLDAGA +I I ++ GE +++D+G G
Sbjct: 4 INILNADTANKIAAGEVVERPSSVVKELVENSLDAGAKNITIEIQNGGESLIKIIDDGSG 63
Query: 72 ISPNNFKVRAVFLCQAYALIAKGVRFVCTNTTG 104
+ P + V F A + I NT G
Sbjct: 64 VHPED--VEKAFNPHATSKIKDTYDIFSINTLG 94
>gi|110800749|ref|YP_695805.1| DNA mismatch repair protein [Clostridium perfringens ATCC 13124]
gi|122958915|sp|Q0TRD5.1|MUTL_CLOP1 RecName: Full=DNA mismatch repair protein MutL
gi|110675396|gb|ABG84383.1| DNA mismatch repair protein MutL [Clostridium perfringens ATCC
13124]
Length = 674
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 110/203 (54%), Gaps = 23/203 (11%)
Query: 606 ERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTV---LNQQ 662
E ++R+ F +++VIGQFN +I+ + D L+++DQHAA EK FE+ S + Q
Sbjct: 475 EIIYREAKFPKLRVIGQFNKTYILAEYDSTLYLIDQHAAHEKILFEKYSSDIAKKRVEIQ 534
Query: 663 PLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVP-FSKKITFGV 721
PL+ PL + L E+ + + +I K GF + + R++ VP F K+
Sbjct: 535 PLMIPLVVTLPTEDYLYYDENKEIFEKAGFKISD----FGDNSIRIEEVPYFLDKL---- 586
Query: 722 EDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEM 781
+ +LI+++ +N KM T ++V + +AS +CR+++ D L EM
Sbjct: 587 -NPTELITSMINNLK--------KMGTGETVEVKYNK--IASMSCRAAVKANDVLSILEM 635
Query: 782 QKILEHLADLNSPWNCPHGRPTM 804
+ ++E L +N P++CPHGRPT+
Sbjct: 636 ENLIEDLRYINDPFHCPHGRPTI 658
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 52/93 (55%), Gaps = 2/93 (2%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I +N ++I AG+V++ SS VKELVENSLDAGA +I I ++ GE +++D+G G
Sbjct: 4 INILNADTANKIAAGEVVERPSSVVKELVENSLDAGAKNITIEIQNGGESLIKIIDDGSG 63
Query: 72 ISPNNFKVRAVFLCQAYALIAKGVRFVCTNTTG 104
+ P + V F A + I NT G
Sbjct: 64 VHPED--VEKAFNPHATSKIKDTYDIFSINTLG 94
>gi|159118777|ref|XP_001709607.1| Pms1-like protein [Giardia lamblia ATCC 50803]
gi|157437724|gb|EDO81933.1| Pms1-like protein [Giardia lamblia ATCC 50803]
Length = 727
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 119/232 (51%), Gaps = 29/232 (12%)
Query: 609 FRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQS--TVLNQQPLLR 666
FR++DF +K I Q+N F+I +L+ +++DQHAA E +F + L++Q +
Sbjct: 489 FRQQDFNNLKYICQYNQSFLITQLNNTFYLIDQHAAHEAKHFSDYWHNPHCYLSRQKTIT 548
Query: 667 PLKLDLTPEE-----EVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGV 721
PLKL L P+E E ++S DII GF L L+ + + P T
Sbjct: 549 PLKLRLRPDEKLCLEEFLSSAIFDII---GFEL-----CLSENYVLIFSFPSLFGQTLTE 600
Query: 722 EDVKDLISTLADNQGEC--SIISSYKMDTA-----------DSVCPSRVRAMLASRACRS 768
ED ++ + +L + E SII + + +++ P R+R + AS++C++
Sbjct: 601 EDFREYLLSLYGHTREHVESIICAKSTGSKPREKSLLCLLHNNIAPPRIRKIFASKSCKA 660
Query: 769 SIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKNIDEN 820
S+ +GD L + ++I+ LA P+NCPHGRP +R L DL + DE+
Sbjct: 661 SVRLGDPLLDSTAKRIIADLARCEKPFNCPHGRPVLRFL-DLAPRADSTDED 711
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 37/69 (53%)
Query: 4 ETPTNSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWF 63
E+ + IR ++ G I A Q D V L+ENSLDAGA+ I I L+ G +
Sbjct: 6 ESKAEAGRIRSLSAGDSRLILATQQFPDPYKVVSALLENSLDAGASEIAIVLEGMGLKSI 65
Query: 64 QVVDNGCGI 72
V DNGCG+
Sbjct: 66 TVNDNGCGL 74
>gi|168218089|ref|ZP_02643714.1| DNA mismatch repair protein MutL [Clostridium perfringens NCTC
8239]
gi|182379888|gb|EDT77367.1| DNA mismatch repair protein MutL [Clostridium perfringens NCTC
8239]
Length = 674
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 110/203 (54%), Gaps = 23/203 (11%)
Query: 606 ERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQ---Q 662
E ++++ F ++KVIGQFN +I+ + D L+++DQHAA EK FE+ S + Q
Sbjct: 475 ETIYKEAKFPKLKVIGQFNKTYILAEYDSTLYLIDQHAAHEKILFEKYSSDIAKKKVEIQ 534
Query: 663 PLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVP-FSKKITFGV 721
PL+ PL + L E+ + + +I K GF + + R++ VP F K+
Sbjct: 535 PLMIPLVVTLPIEDYLYYDENKEIFEKAGFKISD----FGDNSIRIEEVPYFLDKL---- 586
Query: 722 EDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEM 781
+ +LI+++ +N KM T ++V + +AS +CR+++ D L EM
Sbjct: 587 -NPTELITSMINNLK--------KMGTGETVEVKYNK--IASMSCRAAVKANDVLSILEM 635
Query: 782 QKILEHLADLNSPWNCPHGRPTM 804
+ ++E L +N P++CPHGRPT+
Sbjct: 636 ENLIEDLRYINDPFHCPHGRPTI 658
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 52/93 (55%), Gaps = 2/93 (2%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I +N ++I AG+V++ SS VKELVENSLDAGA +I I ++ GE +++D+G G
Sbjct: 4 INILNADTANKIAAGEVVERPSSVVKELVENSLDAGAKNITIEIQNGGESLIKIIDDGSG 63
Query: 72 ISPNNFKVRAVFLCQAYALIAKGVRFVCTNTTG 104
+ P + V F A + I NT G
Sbjct: 64 VHPED--VEKAFNPHATSKIKDTYDIFSINTLG 94
>gi|153933845|ref|YP_001384056.1| DNA mismatch repair protein [Clostridium botulinum A str. ATCC
19397]
gi|153936560|ref|YP_001387597.1| DNA mismatch repair protein [Clostridium botulinum A str. Hall]
gi|166232084|sp|A7FUK9.1|MUTL_CLOB1 RecName: Full=DNA mismatch repair protein MutL
gi|152929889|gb|ABS35389.1| DNA mismatch repair protein MutL [Clostridium botulinum A str. ATCC
19397]
gi|152932474|gb|ABS37973.1| DNA mismatch repair protein MutL [Clostridium botulinum A str.
Hall]
Length = 666
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 103/192 (53%), Gaps = 23/192 (11%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLS---QSTVLNQQPLLRPLKLDLT 673
MK+IGQFN +I+ + D++L+I+DQHAA EK FE+ + + Q LL P+ ++L+
Sbjct: 478 MKIIGQFNNTYILIEKDKELYIIDQHAAHEKVLFEKFKCEIEKGYVISQILLSPVVIELS 537
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
+E + + DI + +GFS+E +K VP + G +V++L +
Sbjct: 538 EDEFNIYEENKDIFKNSGFSVE----TFGEYTINIKEVP----LILGKPNVENLFMDIL- 588
Query: 734 NQGECSIISSYKMDTADSVCPSRVRA-MLASRACRSSIMIGDALGRNEMQKILEHLADLN 792
Y + S S ++ +A+ AC+S++ D L E++K++E + LN
Sbjct: 589 ----------YNLKNMKSKETSTIKYNAIATLACKSAVKANDNLKEEEIKKLIEDMLILN 638
Query: 793 SPWNCPHGRPTM 804
+P+ CPHGRPTM
Sbjct: 639 NPYTCPHGRPTM 650
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 48/71 (67%), Gaps = 2/71 (2%)
Query: 21 HRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFKVR 80
++I AG+VI+ S VKELVENS+DAGA +I I +++ G++ +++D+G GI P ++
Sbjct: 13 NKIAAGEVIERPFSVVKELVENSIDAGAKNITIEIEDGGQKLIKIIDDGEGIYP--IDIK 70
Query: 81 AVFLCQAYALI 91
FL A + I
Sbjct: 71 NAFLPHATSKI 81
Score = 45.1 bits (105), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 96/235 (40%), Gaps = 26/235 (11%)
Query: 26 GQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPN--------NF 77
G+ + +SS K +++ +D+ EI ++ E+ + D GC + N
Sbjct: 97 GEALASISSVSKTKLKSRVDSYNFGKEIYIEGGKIEYLK--DTGCNVGTTIEVSDLFYNV 154
Query: 78 KVRAVFLCQAYALIAKGV----RFVCT------NTTGKNVKSVVLKTQGSSSLKDNIITV 127
R FL A + + RF+ + N K +S+ K+ G+ +LKD+I V
Sbjct: 155 PARLKFLKSARSDSSSISDIVNRFILSHPDISFNLINKGKQSI--KSYGTGNLKDSIRCV 212
Query: 128 FGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVN 187
+ I L K D V GF+ KP R Q FVN R V ++ V
Sbjct: 213 YNKTISENLINFESHK-DIISVYGFIGKPE--ISRKSRTNQSIFVNKRYVKSKFITAAVE 269
Query: 188 ELYKG-ANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQE 241
+K YP ++ + DVNV P K +V F DE ++ + + + E
Sbjct: 270 NAFKSFLTVNSYPFFVIFIDIFPEYIDVNVHPTKSEVKFKDERAMFKTIFDAVHE 324
>gi|170757624|ref|YP_001781347.1| DNA mismatch repair protein [Clostridium botulinum B1 str. Okra]
gi|429246330|ref|ZP_19209660.1| DNA mismatch repair protein [Clostridium botulinum CFSAN001628]
gi|229890122|sp|B1IM67.1|MUTL_CLOBK RecName: Full=DNA mismatch repair protein MutL
gi|169122836|gb|ACA46672.1| DNA mismatch repair protein MutL [Clostridium botulinum B1 str.
Okra]
gi|428756640|gb|EKX79182.1| DNA mismatch repair protein [Clostridium botulinum CFSAN001628]
Length = 666
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 103/192 (53%), Gaps = 23/192 (11%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLS---QSTVLNQQPLLRPLKLDLT 673
MK+IGQFN +I+ + D++L+I+DQHAA EK FE+ + + Q LL P+ ++L+
Sbjct: 478 MKIIGQFNNTYILIEKDKELYIIDQHAAHEKVLFEKFKSEIEKGYVISQILLSPVVIELS 537
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
+E + + DI + +GFS+E +K VP + G +V++L +
Sbjct: 538 EDEFNIYEENKDIFKNSGFSVE----TFGEYTINIKEVP----LILGKPNVENLFMDIL- 588
Query: 734 NQGECSIISSYKMDTADSVCPSRVRA-MLASRACRSSIMIGDALGRNEMQKILEHLADLN 792
Y + S S ++ +A+ AC+S++ D L E++K++E + LN
Sbjct: 589 ----------YNLKNMKSKETSTIKYNAIATLACKSAVKANDNLKEEEIKKLIEDMLILN 638
Query: 793 SPWNCPHGRPTM 804
+P+ CPHGRPTM
Sbjct: 639 NPYTCPHGRPTM 650
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 48/71 (67%), Gaps = 2/71 (2%)
Query: 21 HRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFKVR 80
++I AG+VI+ S VKELVENS+DAGA +I I +++ G++ +++D+G GI P ++
Sbjct: 13 NKIAAGEVIERPFSVVKELVENSIDAGAKNITIEIEDGGQKLIKIIDDGEGIYP--IDIK 70
Query: 81 AVFLCQAYALI 91
FL A + I
Sbjct: 71 NAFLPHATSKI 81
Score = 41.2 bits (95), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 92/238 (38%), Gaps = 32/238 (13%)
Query: 26 GQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPN--------NF 77
G+ + +SS K +++ +D+ EI ++ E+ + D GC + N
Sbjct: 97 GEALASISSVSKTKLKSRVDSYNFGKEIYIEGGKIEYLK--DTGCNVGTTIEVSDLFYNV 154
Query: 78 KVRAVFLCQA-------------YALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNI 124
R FL A + L + F N +++KS G+ +LKD+I
Sbjct: 155 PARLKFLKSARSDSSSISDIVNRFILAHPDISFNLINKGKQSIKSY-----GTGNLKDSI 209
Query: 125 ITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSK 184
V+ I L K D V GF+ K R Q FVN R V ++
Sbjct: 210 RCVYNKTISENLINFESHK-DIISVYGFIGKTE--ISRKSRTNQSIFVNKRYVKSKFITA 266
Query: 185 LVNELYKG-ANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQE 241
V +K YP ++ + DVNV P K +V F DE ++ + + + E
Sbjct: 267 AVENAFKSFLTVNSYPFFVIFIDIFPEYIDVNVHPTKSEVKFKDERAMFKTIFDAVHE 324
>gi|387817994|ref|YP_005678339.1| DNA mismatch repair protein MutL [Clostridium botulinum H04402 065]
gi|322806036|emb|CBZ03603.1| DNA mismatch repair protein MutL [Clostridium botulinum H04402 065]
Length = 666
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 103/192 (53%), Gaps = 23/192 (11%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLS---QSTVLNQQPLLRPLKLDLT 673
MK+IGQFN +I+ + D++L+I+DQHAA EK FE+ + + Q LL P+ ++L+
Sbjct: 478 MKIIGQFNNTYILIEKDKELYIIDQHAAHEKVLFEKFKSEIEKGYVISQILLSPVVIELS 537
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
+E + + DI + +GFS+E +K VP + G +V++L +
Sbjct: 538 EDEFNIYEENKDIFKNSGFSVE----TFGEYTINIKEVP----LILGKPNVENLFMDIL- 588
Query: 734 NQGECSIISSYKMDTADSVCPSRVRA-MLASRACRSSIMIGDALGRNEMQKILEHLADLN 792
Y + S S ++ +A+ AC+S++ D L E++K++E + LN
Sbjct: 589 ----------YNLKNMKSKETSTIKYNAIATLACKSAVKANDNLKEEEIKKLIEDMLILN 638
Query: 793 SPWNCPHGRPTM 804
+P+ CPHGRPTM
Sbjct: 639 NPYTCPHGRPTM 650
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 48/71 (67%), Gaps = 2/71 (2%)
Query: 21 HRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFKVR 80
++I AG+VI+ S VKELVENS+DAGA +I I +++ G++ +++D+G GI P ++
Sbjct: 13 NKIAAGEVIERPFSVVKELVENSIDAGAKNITIEIEDGGQKLIKIIDDGEGIYP--IDIK 70
Query: 81 AVFLCQAYALI 91
FL A + I
Sbjct: 71 NAFLPHATSKI 81
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 93/238 (39%), Gaps = 32/238 (13%)
Query: 26 GQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPN--------NF 77
G+ + +SS K +++ +D+ EI ++ E+ + D GC + N
Sbjct: 97 GEALASISSVSKTKLKSRVDSYNFGKEIYIEGGKIEYLK--DTGCNVGTTIEVSDLFYNV 154
Query: 78 KVRAVFLCQA-------------YALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNI 124
R FL A + L + F N +++KS G+ +LKD+I
Sbjct: 155 PARLKFLKSARSDSSSISDIVNRFILAHPDISFNLINKGKQSIKSY-----GTGNLKDSI 209
Query: 125 ITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSK 184
V+ I L K D V GF+ KP R Q FVN R V ++
Sbjct: 210 RCVYNKTISENLINFESHK-DIISVYGFIGKPE--ISRKSRTNQSIFVNKRYVKSKFIAA 266
Query: 185 LVNELYKG-ANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQE 241
V +K YP ++ + DVNV P K +V F DE ++ + + + E
Sbjct: 267 AVENAFKSFLTVNSYPFFVIFIDIFPEYIDVNVHPTKSEVKFKDERAMFKTIFDAVHE 324
>gi|290560158|pdb|3H4L|A Chain A, Crystal Structure Of N Terminal Domain Of A Dna Repair
Prote
gi|290560159|pdb|3H4L|B Chain B, Crystal Structure Of N Terminal Domain Of A Dna Repair
Prote
Length = 367
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 94/183 (51%), Gaps = 22/183 (12%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAIC- 142
+ Q YA+I ++F N T K K+++L T +SS++ NI +VFG LE V +
Sbjct: 177 VIQGYAIINAAIKFSVWNITPKGKKNLILSTMRNSSMRKNISSVFGAGGMRGLEEVDLVL 236
Query: 143 ------------KSD---------SCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPK 181
+D +V+G++S+ G GRN DRQ+ +VN RPV+
Sbjct: 237 DLNPFKNRMLGKYTDDPDFLDLDYKIRVKGYISQNSFGCGRNSKDRQFIYVNKRPVEYST 296
Query: 182 VSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQE 241
+ K NE+YK N+ Q+P +N +P DVNVTPDKR + +E +++ + L +
Sbjct: 297 LLKCCNEVYKTFNNVQFPAVFLNLELPMSLIDVNVTPDKRVILLHNERAVIDIFKTTLSD 356
Query: 242 IYS 244
Y+
Sbjct: 357 YYN 359
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 50/71 (70%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I IN VHRI +GQVI DL++AVKELV+NS+DA A IEI K+YG E + DNG G
Sbjct: 6 IHQINDIDVHRITSGQVITDLTTAVKELVDNSIDANANQIEIIFKDYGLESIECSDNGDG 65
Query: 72 ISPNNFKVRAV 82
I P+N++ A+
Sbjct: 66 IDPSNYEFLAL 76
>gi|195120548|ref|XP_002004786.1| GI20104 [Drosophila mojavensis]
gi|193909854|gb|EDW08721.1| GI20104 [Drosophila mojavensis]
Length = 380
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 94/188 (50%), Gaps = 37/188 (19%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGM------------- 130
+ QAY L+ + VR +C+N + K KSV+L+T G++ + NI VFG
Sbjct: 193 ILQAYCLVTRNVRIICSNQSAKGAKSVILQTHGAADVLANISAVFGARQVADLVPLKSPL 252
Query: 131 --------NIYNCLEPVAICKSDSC----------------KVEGFLSKPGQGSGRNLGD 166
+ L+ + +C ++EG++S G+GR+ D
Sbjct: 253 EAGQLSEAGLREALQTASDAAETTCVEFNAEDVERLNEAGFELEGYISSCRHGAGRSTRD 312
Query: 167 RQYFFVNDRPVDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFS 226
RQ+FFVN RP + ++K++N++Y+ N +Q P +N + DVN+TPDKR++ +
Sbjct: 313 RQFFFVNSRPCEPKNIAKVMNDMYRRYNVQQQPFIYLNIVTSRAEVDVNLTPDKRQLLLN 372
Query: 227 DECSILHA 234
+E +L A
Sbjct: 373 NERILLLA 380
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/74 (52%), Positives = 51/74 (68%)
Query: 5 TPTNSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQ 64
T S I+ I K VH+IC+GQV+ L+ A+KELVENS+DAGAT IEI LKE G + +
Sbjct: 14 TSAASGQIKAIAKDTVHKICSGQVVLSLAVAIKELVENSIDAGATLIEIKLKEQGLQGVE 73
Query: 65 VVDNGCGISPNNFK 78
V DNG G+ +N +
Sbjct: 74 VCDNGSGVEESNLE 87
>gi|308161091|gb|EFO63551.1| Pms1-like protein [Giardia lamblia P15]
Length = 726
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 114/222 (51%), Gaps = 30/222 (13%)
Query: 609 FRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQST--VLNQQPLLR 666
FR++DF +K I Q+N F+I +L+ +++DQHAA E +F + L++Q +
Sbjct: 489 FRQQDFANLKYICQYNQSFLIAQLNNVFYLIDQHAAHEAKHFSNYWHNPHCYLSKQKTIT 548
Query: 667 PLKLDLTPEE-----EVVASMHMDIIRKNGFSLE-EDPHALAGLRFRLKAVPFSKKITFG 720
PL+L L P+E E ++S+ D I GF L + H L + + P T
Sbjct: 549 PLRLILRPDEKLCLEEFLSSVVFDTI---GFELRMSENHVL------ISSFPSLFGQTLT 599
Query: 721 VEDVKDLISTLADNQGE-----CSIISSYKMDTADSVC-------PSRVRAMLASRACRS 768
ED ++ + +L E C+ + K +C P ++R + AS++C++
Sbjct: 600 EEDFREYLLSLYGYTREYVESICTKDTGSKTRENSLLCLLHNNIAPPKIRKIFASKSCKA 659
Query: 769 SIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
SI +GD L + ++++ LA P+NCPHGRP +R L+DL
Sbjct: 660 SIRLGDPLLDSTAKRVIADLASCEKPFNCPHGRPVLR-LLDL 700
Score = 46.2 bits (108), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 29/50 (58%)
Query: 23 ICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGI 72
I A Q D + L+ENSLDAGA+ I I L+ G + V DNGCG+
Sbjct: 25 ILATQQFPDPHKVISALLENSLDAGASEISIVLESMGIKSITVNDNGCGL 74
>gi|170574153|ref|XP_001892689.1| DNA mismatch repair protein MutL containing protein [Brugia malayi]
gi|158601598|gb|EDP38475.1| DNA mismatch repair protein MutL containing protein [Brugia malayi]
Length = 678
Score = 102 bits (254), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 91/180 (50%), Gaps = 17/180 (9%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFG--------MNIYNC 135
+ Q++AL VRFV + ++ G++ +KD I+++FG ++I
Sbjct: 185 VVQSFALSRTDVRFVVNSLMDGKQYQALVTPGGNAPIKDIIVSLFGARFEKGTILDIIQQ 244
Query: 136 LEPVAIC---------KSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLV 186
+IC K D K+ G++S G GR+ DRQ+ + N RPVD K+ ++
Sbjct: 245 EPDESICSLYGISDQSKFDDIKITGYISSCVHGQGRSTADRQFIYFNKRPVDYSKLCRIA 304
Query: 187 NELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPN 246
NE+Y+ N QY + I+ VP + DVNV PDKR VFF E + LR L ++P+
Sbjct: 305 NEVYQQYNRGQYCMLILFIDVPPESIDVNVAPDKRSVFFEREKELFALLRASLLATFAPH 364
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 48/78 (61%), Gaps = 4/78 (5%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I I V +IC GQV+ L+ A KEL++NSLDA A +IE+ +++ G E +V+D+G G
Sbjct: 13 IHAIPIDVCRKICTGQVVITLAGACKELIDNSLDAQAKTIEVRVRKMGFERMEVIDDGIG 72
Query: 72 ISPNNFKVRAVFLCQAYA 89
I NF LC+ ++
Sbjct: 73 IHSLNFDA----LCKPHS 86
>gi|187779608|ref|ZP_02996081.1| hypothetical protein CLOSPO_03204 [Clostridium sporogenes ATCC
15579]
gi|187773233|gb|EDU37035.1| DNA mismatch repair domain protein [Clostridium sporogenes ATCC
15579]
Length = 664
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 103/192 (53%), Gaps = 23/192 (11%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLS---QSTVLNQQPLLRPLKLDLT 673
MK+IGQFN +I+ + D++L+I+DQHAA EK FE+ + + Q LL P+ ++L+
Sbjct: 476 MKIIGQFNNTYILIEKDKELYIIDQHAAHEKVLFEKFKSEIEKGYVISQILLSPVVIELS 535
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
+E + + I + +GFS+E A +K VP + G +V++L +
Sbjct: 536 EDEFNIYEENKYIFKNSGFSVE----AFGEYTINIKEVP----LILGKPNVENLFMDIL- 586
Query: 734 NQGECSIISSYKMDTADSVCPSRVRA-MLASRACRSSIMIGDALGRNEMQKILEHLADLN 792
Y + S S ++ +A+ AC+S++ D L E++K++E + L+
Sbjct: 587 ----------YNLKNMKSKETSTIKYNAIATLACKSAVKANDTLKEEEIKKLIEDMLILD 636
Query: 793 SPWNCPHGRPTM 804
+P+ CPHGRPTM
Sbjct: 637 NPYTCPHGRPTM 648
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 46/71 (64%), Gaps = 2/71 (2%)
Query: 21 HRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFKVR 80
++I AG+VI+ S VKELVENS+DA A +I I +++ G+ +++D+G GI P ++
Sbjct: 13 NKIAAGEVIERPFSVVKELVENSIDANAKNITIEIEDGGQRLIKIIDDGEGIYP--IDIK 70
Query: 81 AVFLCQAYALI 91
FL A + I
Sbjct: 71 NAFLPHATSKI 81
Score = 46.2 bits (108), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 58/131 (44%), Gaps = 4/131 (3%)
Query: 112 LKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFF 171
+K+ G+ +LKD+I V+ I L K D V GF+ KP R Q F
Sbjct: 197 IKSYGTGNLKDSIRCVYNKTISENLINFESHK-DIISVYGFIGKPE--ISRKSRTNQSIF 253
Query: 172 VNDRPVDLPKVSKLVNELYKG-ANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECS 230
VN R V ++ V +K YP ++ + DVNV P K +V F DE +
Sbjct: 254 VNKRYVKSKFITAAVENAFKSFLTVNSYPFFVIFIDIFPEYIDVNVHPTKSEVKFKDERA 313
Query: 231 ILHALREGLQE 241
+ A+ + + E
Sbjct: 314 MFKAIFDAVHE 324
>gi|33667830|gb|AAQ24515.1| Pms1 [Giardia intestinalis]
Length = 727
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 118/232 (50%), Gaps = 29/232 (12%)
Query: 609 FRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQS--TVLNQQPLLR 666
FR++DF +K I Q+N F+I +L+ +++DQHAA E +F + L++Q +
Sbjct: 489 FRQQDFNNLKYICQYNQSFLITQLNNTFYLIDQHAAHEAKHFSDYWHNPHCYLSRQKTIT 548
Query: 667 PLKLDLTPEE-----EVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGV 721
PLKL L P+E E ++S DII GF L L+ + + P T
Sbjct: 549 PLKLRLRPDEKLCLEEFLSSAIFDII---GFEL-----CLSENYVLIFSFPSLFGQTLTE 600
Query: 722 EDVKDLISTLADNQGEC--SIISSYKMDTA-----------DSVCPSRVRAMLASRACRS 768
ED ++ + +L + E SII + + +++ P R+R + AS++C++
Sbjct: 601 EDFREYLLSLYGHTREHVESIICAKSTGSKPREKSLLCLLHNNIAPPRIRKIFASKSCKA 660
Query: 769 SIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKNIDEN 820
S+ +GD + ++I+ LA P+NCPHGRP +R L DL + DE+
Sbjct: 661 SVRLGDPRLDSTAKRIIADLARCEKPFNCPHGRPVLRFL-DLAPRADSTDED 711
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 37/70 (52%)
Query: 3 VETPTNSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEW 62
E+ + IR ++ G I A Q D V L+ENSLDAGA+ I I L+ G +
Sbjct: 5 TESKAEAGRIRSLSAGDSRLILATQQFPDPYKVVSALLENSLDAGASEIAIVLEGMGLKS 64
Query: 63 FQVVDNGCGI 72
V DNGCG+
Sbjct: 65 ITVNDNGCGL 74
>gi|170761162|ref|YP_001787120.1| DNA mismatch repair protein [Clostridium botulinum A3 str. Loch
Maree]
gi|238688735|sp|B1KSA2.1|MUTL_CLOBM RecName: Full=DNA mismatch repair protein MutL
gi|169408151|gb|ACA56562.1| DNA mismatch repair protein MutL [Clostridium botulinum A3 str.
Loch Maree]
Length = 666
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 103/192 (53%), Gaps = 23/192 (11%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLS---QSTVLNQQPLLRPLKLDLT 673
MK+IGQFN +I+ + D++L+I+DQHAA EK FE+ + + Q LL P+ ++L+
Sbjct: 478 MKIIGQFNNTYILIEKDKELYIIDQHAAHEKVLFEKFKSEIEKGYVISQILLSPVVIELS 537
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
+E + + DI + +GF++E +K VP + G +V++L +
Sbjct: 538 EDEFNIYEENKDIFKNSGFAVEN----FGESTINIKEVP----LILGKPNVENLFMDIL- 588
Query: 734 NQGECSIISSYKMDTADSVCPSRVRA-MLASRACRSSIMIGDALGRNEMQKILEHLADLN 792
Y + S S ++ +A+ AC+S++ D L E++K++E + LN
Sbjct: 589 ----------YNLKNMKSKETSTIKYNAIATLACKSAVKANDNLKEEEIKKLIEDMLILN 638
Query: 793 SPWNCPHGRPTM 804
+P+ CPHGRPTM
Sbjct: 639 NPYTCPHGRPTM 650
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 46/67 (68%), Gaps = 2/67 (2%)
Query: 21 HRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFKVR 80
++I AG+VI+ S VKELVENS+DAGA +I I +++ G++ +++D+G GI P ++
Sbjct: 13 NKIAAGEVIERPFSVVKELVENSIDAGAKNITIEIEDGGQKLIKIIDDGEGIYP--IDIK 70
Query: 81 AVFLCQA 87
FL A
Sbjct: 71 NAFLPHA 77
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 93/238 (39%), Gaps = 32/238 (13%)
Query: 26 GQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPN--------NF 77
G+ + +SS K +++ +D+ EI ++ E+ + D GC + N
Sbjct: 97 GEALASISSVSKTKLKSRVDSYNFGKEIYIEGGKIEYLK--DTGCNVGTTIEVSDLFYNV 154
Query: 78 KVRAVFLCQA-------------YALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNI 124
R FL A + L + F N +++KS G+ +LKD+I
Sbjct: 155 PARLKFLKSARSDSSSISDIVNRFILAHPDISFNLINKGKQSIKSY-----GTGNLKDSI 209
Query: 125 ITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSK 184
V+ I L K D V GF+ KP R Q FVN R V ++
Sbjct: 210 RCVYNKTISENLINFESHK-DIISVYGFIGKPE--ISRKSRTNQSIFVNKRYVKSKFITA 266
Query: 185 LVNELYKG-ANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQE 241
V +K YP ++ + DVNV P K +V F DE ++ + + + E
Sbjct: 267 AVENAFKSFLTVNSYPFFVIFIDIFPEYIDVNVHPTKSEVKFKDERAMFKTIFDAVHE 324
>gi|424834368|ref|ZP_18259079.1| DNA mismatch repair protein [Clostridium sporogenes PA 3679]
gi|365978714|gb|EHN14783.1| DNA mismatch repair protein [Clostridium sporogenes PA 3679]
Length = 664
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 103/192 (53%), Gaps = 23/192 (11%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLS---QSTVLNQQPLLRPLKLDLT 673
+K+IGQFN +I+ + D++L+I+DQHAA EK FE+ + + Q LL P+ ++L+
Sbjct: 476 LKIIGQFNNTYILIEKDKELYIIDQHAAHEKVLFEKFKSEIEKGYVISQILLSPVVIELS 535
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
+E + + DI + +GFS+E +K VP + G +V++L +
Sbjct: 536 EDEFNIYEENKDIFKNSGFSVE----VFGECTINIKEVP----LILGKPNVENLFMDIL- 586
Query: 734 NQGECSIISSYKMDTADSVCPSRVRA-MLASRACRSSIMIGDALGRNEMQKILEHLADLN 792
Y + S S ++ +A+ AC+S++ D L E++K++E + L+
Sbjct: 587 ----------YNLKNMKSKETSTIKYNAIATLACKSAVKANDTLKEEEIKKLIEDMLILD 636
Query: 793 SPWNCPHGRPTM 804
+P+ CPHGRPTM
Sbjct: 637 NPYTCPHGRPTM 648
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 48/71 (67%), Gaps = 2/71 (2%)
Query: 21 HRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFKVR 80
++I AG+VI+ S VKELVENS+DA A +I I +++ G+++ +++D+G GI P ++
Sbjct: 13 NKIAAGEVIERPFSVVKELVENSIDANAKNITIEIEDGGQKFIKIIDDGEGIYP--IDIK 70
Query: 81 AVFLCQAYALI 91
FL A + I
Sbjct: 71 NAFLPHATSKI 81
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 58/131 (44%), Gaps = 4/131 (3%)
Query: 112 LKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFF 171
+K+ G+ +LKD+I V+ I L K D V GF+ KP R Q F
Sbjct: 197 IKSYGTGNLKDSIRCVYNKTISENLINFESHK-DIISVYGFIGKPE--ISRKSRTNQSIF 253
Query: 172 VNDRPVDLPKVSKLVNELYKG-ANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECS 230
VN R V ++ V +K YP ++ + DVNV P K +V F DE +
Sbjct: 254 VNKRYVKSKFITAAVENAFKSFLTVNSYPFFVIFIDIFPEYIDVNVHPTKSEVKFKDERA 313
Query: 231 ILHALREGLQE 241
+ A+ + + E
Sbjct: 314 MFKAIFDSVHE 324
>gi|170111214|ref|XP_001886811.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164638169|gb|EDR02448.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 365
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 87/160 (54%), Gaps = 17/160 (10%)
Query: 94 GVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDS------- 146
GVR +N K KSV ++T G+ S + ++ ++G + + + + S
Sbjct: 196 GVRLTVSNQLDKGFKSVQIRTNGTPSTRASVTALWGPKALDNIVDLNLAFSVDREKHTLR 255
Query: 147 ----------CKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSR 196
+V+G LSK G GR DRQ+ +VN RP +L KV K NE+Y+ N+
Sbjct: 256 GQSQATETVFVEVKGLLSKFAVGCGRPGTDRQFLYVNGRPCNLSKVQKAFNEVYRTFNAN 315
Query: 197 QYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALR 236
Q P + +FI+PT +CD+N++PDKR +F +E +++ AL+
Sbjct: 316 QVPFILADFILPTESCDINLSPDKRTIFLHNEGNLISALK 355
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 53/69 (76%)
Query: 9 SPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDN 68
S +I+ I++ +HRI +GQV+ DL +AVKELVENS+DAGATS+E+ K+YG + +V+DN
Sbjct: 5 SSSIKAIDRTSIHRITSGQVVIDLQTAVKELVENSIDAGATSVEVRFKQYGLKSVEVIDN 64
Query: 69 GCGISPNNF 77
G GI ++
Sbjct: 65 GSGIPEEDY 73
>gi|422874018|ref|ZP_16920503.1| DNA mismatch repair protein [Clostridium perfringens F262]
gi|380305013|gb|EIA17296.1| DNA mismatch repair protein [Clostridium perfringens F262]
Length = 675
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 109/203 (53%), Gaps = 23/203 (11%)
Query: 606 ERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQ---Q 662
E ++R+ F +++VIGQFN +I+ + D L+++DQHAA EK FE+ S + Q
Sbjct: 476 EIIYREAKFPKLRVIGQFNKTYILAEYDSTLYLIDQHAAHEKILFEKYSSDIAKKKVEIQ 535
Query: 663 PLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVP-FSKKITFGV 721
L+ PL + L E+ + + +I K GF + + R++ VP F K+
Sbjct: 536 TLMIPLVVTLPTEDYLYYDENKEIFEKAGFKISD----FGDNSIRIEEVPYFLDKL---- 587
Query: 722 EDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEM 781
+ +LI+++ +N KM T ++V + +AS +CR+++ D L EM
Sbjct: 588 -NPTELITSMINNLK--------KMGTGETVEVKYNK--IASMSCRAAVKANDVLSILEM 636
Query: 782 QKILEHLADLNSPWNCPHGRPTM 804
+ ++E L +N P++CPHGRPT+
Sbjct: 637 ENLIEDLRYINDPFHCPHGRPTI 659
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 52/93 (55%), Gaps = 2/93 (2%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I +N ++I AG+V++ SS VKELVENSLDAGA +I I ++ GE +++D+G G
Sbjct: 4 INILNADTANKIAAGEVVERPSSVVKELVENSLDAGAKNITIEIQNGGESLIKIIDDGSG 63
Query: 72 ISPNNFKVRAVFLCQAYALIAKGVRFVCTNTTG 104
+ P + V F A + I NT G
Sbjct: 64 VHPED--VEKAFNPHATSKIRDTYDIFSINTLG 94
>gi|83032814|ref|XP_729204.1| DNA mismatch repair protein [Plasmodium yoelii yoelii 17XNL]
gi|23486315|gb|EAA20769.1| DNA mismatch repair protein, C-terminal domain, putative [Plasmodium
yoelii yoelii]
Length = 1157
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 132/294 (44%), Gaps = 88/294 (29%)
Query: 609 FRKEDFGRMKVIGQFNLGFIIGKLD------QD------------------------LFI 638
F+ F ++K+ GQFN GFI+ K+D +D LFI
Sbjct: 814 FKSNLFKKLKICGQFNKGFILSKIDLLYFKNEDNKSKNNDMNETDENENVDRKNNYALFI 873
Query: 639 VDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEE-- 696
+DQHAADEK NFE+ ++ + Q L+ ++L+L+P + + + I +NGF +E
Sbjct: 874 IDQHAADEKSNFEKYNKIFTMKSQKLINKIELELSPAQIHIIEKNFVIFLRNGFEIEIIE 933
Query: 697 --------------------DPHALAGLRFRLKAVP-FSKKITFGVEDVKDLISTLA--- 732
L ++ L ++P F+ KI V D L+ L
Sbjct: 934 EPINKKRKINNDENNDENIISEETLMEMKVYLLSLPVFNGKI-LEVVDFMSLLHHLTNHP 992
Query: 733 ---DNQGECSIISSYK--MDTADSVC------PSRVRAMLASR----------------- 764
D Q + S + + +D ++ P +V +LAS+
Sbjct: 993 IIFDKQIDNSFFRNNQKLIDNTETWFNYNFPRPQKVWKILASKYVSFCTVTVPLYLFSPL 1052
Query: 765 ---ACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRK 815
ACR+++M+G L +EM +I + L+ L +PWNCPHGRPT++++++ I+K
Sbjct: 1053 FVSACRNAVMVGKTLNISEMIRIKKKLSVLQNPWNCPHGRPTIKYIINNIEIQK 1106
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 102/174 (58%), Gaps = 13/174 (7%)
Query: 84 LCQAYALIAKGVRFVCTNTTG-----KNVKSVVLKTQGSSSLKDNIITVFGM-NIYNCLE 137
L Q YA+I ++F+ N KN+ ++ T GS +K N ++FG NI N ++
Sbjct: 176 LMQQYAIIYHEIKFMIFNVVTQKGCTKNMNMLI--TNGSDDIKKNFYSIFGKKNIGNLID 233
Query: 138 PVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPK-VSKLVNELYKGANSR 196
+++ V+G++S SGR D Q++++N+RP+ + K V+K++N +Y+ NSR
Sbjct: 234 --FNITNENWLVKGYIS--DSNSGRRDKDLQFYYMNNRPIHVIKNVNKIINTIYREFNSR 289
Query: 197 QYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASY 250
YPI I N + ++ D+NVTPDKR+VFF+ E + ++ L ++ +P +++
Sbjct: 290 LYPIIIFNILSDSKNIDINVTPDKREVFFTFENELCEEIKTELIKLLTPKTSNF 343
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 45/67 (67%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ I +H IC+ QVI LS+ VKELVENS+DAGAT I++ L E G + +V DNG G
Sbjct: 3 IKSIGDESIHNICSSQVIFTLSNVVKELVENSIDAGATEIKVKLVENGIKIIEVSDNGNG 62
Query: 72 ISPNNFK 78
I NF+
Sbjct: 63 IKKINFE 69
>gi|150017423|ref|YP_001309677.1| DNA mismatch repair protein [Clostridium beijerinckii NCIMB 8052]
gi|189030395|sp|A6LWJ1.1|MUTL_CLOB8 RecName: Full=DNA mismatch repair protein MutL
gi|149903888|gb|ABR34721.1| DNA mismatch repair protein MutL [Clostridium beijerinckii NCIMB
8052]
Length = 664
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 105/196 (53%), Gaps = 25/196 (12%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFER----LSQSTVLNQQPLLRPLK 669
F + +IGQ+N +I+G+ D L+++DQHAA EK FE+ + + T++ QPL+ P
Sbjct: 473 FPPITIIGQYNKTYILGEYDGTLYMIDQHAAHEKILFEKYLKEIEEGTII-IQPLIVPSI 531
Query: 670 LDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIS 729
+DL+ ++ + DI R+ GF LEE G LK VP+ G + K+L
Sbjct: 532 IDLSIDDYSYFEENKDIFREAGFLLEE----FGGSSLSLKEVPY----FLGRLNPKNLFL 583
Query: 730 TLADNQGECSIISSYKMDTADSVCPSRVRA-MLASRACRSSIMIGDALGRNEMQKILEHL 788
+ DN + + S V+ +A++AC+++I D L NEM K++E L
Sbjct: 584 DILDN-----------LKNLGNGKTSEVKHNAIATKACKAAIKGNDKLEMNEMIKLIEDL 632
Query: 789 ADLNSPWNCPHGRPTM 804
++ P++CPHGRP +
Sbjct: 633 RYIDDPFHCPHGRPVI 648
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 54/93 (58%), Gaps = 2/93 (2%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I +N+ ++I AG+V++ +S VKEL+ENS+DA A +I I ++E G +++D+G G
Sbjct: 4 INILNEDTANKIAAGEVVERPASVVKELIENSIDANAKNIIIEIEEGGISLIRIIDDGDG 63
Query: 72 ISPNNFKVRAVFLCQAYALIAKGVRFVCTNTTG 104
I ++ + FL A + I + +T G
Sbjct: 64 IYKDD--IAKAFLPHATSKIQESEDIYNIHTLG 94
Score = 42.7 bits (99), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 63/128 (49%), Gaps = 8/128 (6%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLS--KPGQGSGRNLGDRQ 168
VL T G+ LKD I T++G +I + + + SD V G++ + +GS N Q
Sbjct: 196 VLHTFGNGDLKDVIRTIYGKSITDNILYFS-DSSDLITVYGYVGTEEIARGSRNN----Q 250
Query: 169 YFFVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSD 227
FVN R + ++ V + +K ++ ++P I+ V DVN+ P K ++ F+D
Sbjct: 251 SIFVNRRYIKNRALAIAVEQAFKSFSTVNKFPFFILFIEVYPEYVDVNIHPTKAEIKFND 310
Query: 228 ECSILHAL 235
E I +
Sbjct: 311 ERMIFKKI 318
>gi|187932933|ref|YP_001886011.1| DNA mismatch repair protein [Clostridium botulinum B str. Eklund
17B]
gi|238691603|sp|B2TIB8.1|MUTL_CLOBB RecName: Full=DNA mismatch repair protein MutL
gi|187721086|gb|ACD22307.1| DNA mismatch repair protein MutL [Clostridium botulinum B str.
Eklund 17B]
Length = 672
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 114/217 (52%), Gaps = 24/217 (11%)
Query: 592 ERKARALAAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFE 651
++++++ T+EL + + F +K+IGQ+N +I+G+ L+++DQHAA EK FE
Sbjct: 460 DKESKSKTTGTSELVKE-KIPKFPAIKIIGQYNKTYILGEYAGTLYMIDQHAAHEKIMFE 518
Query: 652 RLSQSTVLNQ---QPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRL 708
+ + QPL+ P +DL+ ++ + D+ ++ GF++E+ G L
Sbjct: 519 KYLNDIICGDIIIQPLMIPTVIDLSMDDYSYFEENKDVFKEAGFTIED----FGGTSIAL 574
Query: 709 KAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRA-MLASRACR 767
K VP+ G K+L + DN + S + V+ +A++AC+
Sbjct: 575 KEVPY----FLGKLKPKNLFLEILDN-----------LKNLGSGKTTEVKYNAIATKACK 619
Query: 768 SSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTM 804
S++ D+L EM K++E L ++ P++CPHGRPT+
Sbjct: 620 SAVKGNDSLDELEMVKLIEELRYIDDPFHCPHGRPTI 656
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 53/93 (56%), Gaps = 2/93 (2%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I +N+ ++I AG+V++ +S VKELVEN++DA + +I I ++E G +++D+G G
Sbjct: 4 INILNEDTANKIAAGEVVERPASVVKELVENAIDANSKNILIEIEEGGSSLIRIIDDGDG 63
Query: 72 ISPNNFKVRAVFLCQAYALIAKGVRFVCTNTTG 104
I + + FL A + I + NT G
Sbjct: 64 IYKED--IEKAFLPHATSKIKESEDIYSINTLG 94
Score = 44.3 bits (103), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 62/128 (48%), Gaps = 8/128 (6%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICK--SDSCKVEGFLSKPGQGSGRNLGDRQ 168
++ T G+ ++KD I T++G +I +E V + SD + G++ K G + Q
Sbjct: 196 IIHTYGNGNMKDVIRTIYGKSI---VENVLYFEDTSDIATIYGYVGKEAIARGSR--NNQ 250
Query: 169 YFFVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSD 227
FVN R + + V + +K ++ ++P I+ + DVN+ P K +V F+D
Sbjct: 251 SIFVNSRYIKNRSLGIAVEQAFKSFSTVSKFPFFILFIEIYPEYIDVNIHPTKSEVKFND 310
Query: 228 ECSILHAL 235
E I +
Sbjct: 311 ERFIFKKI 318
>gi|168211841|ref|ZP_02637466.1| DNA mismatch repair protein MutL [Clostridium perfringens B str.
ATCC 3626]
gi|170710219|gb|EDT22401.1| DNA mismatch repair protein MutL [Clostridium perfringens B str.
ATCC 3626]
Length = 675
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 110/203 (54%), Gaps = 23/203 (11%)
Query: 606 ERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQ---Q 662
E ++++ F +++VIGQFN +I+ + D L+++DQHAA EK F++ S + Q
Sbjct: 476 ETIYKEAKFPKLRVIGQFNKTYILAEYDSTLYLIDQHAAHEKILFDKYSSDIAKKKVEIQ 535
Query: 663 PLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVP-FSKKITFGV 721
PL+ PL + L E+ + + +I K GF + + R++ VP F K+
Sbjct: 536 PLMIPLVVTLPTEDYLYYDENKEIFEKAGFKISD----FGDNSIRIEEVPYFLDKL---- 587
Query: 722 EDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEM 781
+ +LI+++ +N KM T ++V + +AS +CR+++ D L EM
Sbjct: 588 -NPTELITSMINNLK--------KMGTGETVEVKYNK--IASMSCRAAVKANDVLSILEM 636
Query: 782 QKILEHLADLNSPWNCPHGRPTM 804
+ +++ L +N P++CPHGRPT+
Sbjct: 637 ENLIKDLRYINDPFHCPHGRPTI 659
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 52/93 (55%), Gaps = 2/93 (2%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I +N ++I AG+V++ SS VKELVENSLDAGA +I I ++ GE +++D+G G
Sbjct: 4 INILNADTANKIAAGEVVERPSSVVKELVENSLDAGAKNITIEIQNGGESLIKIIDDGSG 63
Query: 72 ISPNNFKVRAVFLCQAYALIAKGVRFVCTNTTG 104
+ P + V F A + I NT G
Sbjct: 64 VHPED--VEKAFNPHATSKIKDTYDIFSINTLG 94
>gi|363753470|ref|XP_003646951.1| hypothetical protein Ecym_5379 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890587|gb|AET40134.1| hypothetical protein Ecym_5379 [Eremothecium cymbalariae
DBVPG#7215]
Length = 871
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 90/186 (48%), Gaps = 22/186 (11%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFG---------- 129
+ V L Q+Y LI + + T KS+VL T S + NI+ VFG
Sbjct: 172 KCVTLLQSYVLINPQCKISVWHVTANKNKSLVLSTPLKSDVSRNILMVFGSDGLRGLQSL 231
Query: 130 -----MNIYN-------CLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPV 177
+N Y +P + V G++SKP G GR DRQ+ ++N RPV
Sbjct: 232 TLTLDLNQYKEQMGKKYLGDPSWDVYDYTISVSGYISKPSYGCGRAGKDRQFIYINGRPV 291
Query: 178 DLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALRE 237
+ ++ K N+ Y+ N +YP+ I+NF + + DVNVTPDKR V +E +L L E
Sbjct: 292 NYQQIVKCCNDTYRTFNMLEYPVLILNFKLLPQLVDVNVTPDKRTVMLHNEEFVLQCLEE 351
Query: 238 GLQEIY 243
L++ +
Sbjct: 352 RLEQYF 357
Score = 72.8 bits (177), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/63 (57%), Positives = 45/63 (71%)
Query: 20 VHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFKV 79
VH+I +GQVI DL++AVKELVENSLDA A I++ K YG E + DNG GIS NF+
Sbjct: 13 VHKITSGQVIIDLTTAVKELVENSLDAHADKIDLTFKNYGLESIECSDNGDGISEANFEY 72
Query: 80 RAV 82
A+
Sbjct: 73 LAL 75
>gi|242008846|ref|XP_002425208.1| DNA mismatch repair protein pms2, putative [Pediculus humanus
corporis]
gi|212508929|gb|EEB12470.1| DNA mismatch repair protein pms2, putative [Pediculus humanus
corporis]
Length = 712
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 109/223 (48%), Gaps = 33/223 (14%)
Query: 87 AYALIAKGVRFVCTN---------------TTGKNVKSVVLKTQGSSSLKDNIITVFGMN 131
AY LI+ GVR CTN KN + ++ +G S ++ NI ++FG+
Sbjct: 180 AYGLISTGVRITCTNHVVTKSKFQNKNDQDNLKKNFTTTIMDIEGKS-IEFNINSIFGIK 238
Query: 132 -IYNCLEPV----------------AICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVND 174
N L+ V S+ K+EG++S G G++ +RQ++++N
Sbjct: 239 EKQNLLKFVQKNPSLETLKEFNIESKKFNSELYKIEGYISSCSHGCGKSGSNRQFYYINQ 298
Query: 175 RPVDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHA 234
RP+D PK+ KLVNE Y NS + P I++ V D+N+ PDKR+V +E +L
Sbjct: 299 RPIDHPKIFKLVNETYHQFNSHEDPFVILHIKVEDGLFDINLVPDKRQVLVQNENFLLAT 358
Query: 235 LREGLQEIYSPNNASYSVNKVEQLIEPEKSGPSSGAESCMFLE 277
L+E L +++ ++ VN + L ++ SS +C LE
Sbjct: 359 LKESLLDMFKLIPSTLKVNNIGLLNIKFENDKSSDKVNCTQLE 401
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 58/67 (86%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IRPI+K +++IC+GQV+ L++AVKEL+ENSLDAGATSI+I L+EYG + +V+DNGCG
Sbjct: 5 IRPIDKTTINQICSGQVVLTLATAVKELLENSLDAGATSIQIKLEEYGSKVIEVIDNGCG 64
Query: 72 ISPNNFK 78
++ +NF+
Sbjct: 65 VNEDNFQ 71
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 56/90 (62%)
Query: 635 DLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSL 694
D+FI+DQHA+DEKYNFE L TV+ Q ++ P L+LT ++E + H +I +KNGF
Sbjct: 605 DIFIIDQHASDEKYNFEMLKLKTVMQCQKMVNPETLNLTVDKEELMLEHEEIFKKNGFHF 664
Query: 695 EEDPHALAGLRFRLKAVPFSKKITFGVEDV 724
D + R +L +VP SK I FG DV
Sbjct: 665 IFDETQVPTKRIKLTSVPMSKSIVFGKNDV 694
>gi|402590038|gb|EJW83969.1| hypothetical protein WUBG_05120, partial [Wuchereria bancrofti]
Length = 505
Score = 100 bits (250), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 90/180 (50%), Gaps = 17/180 (9%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFG--------MNIYNC 135
+ Q++AL VRFV + ++ G++ +KD I+ +FG ++I
Sbjct: 185 VVQSFALSRTDVRFVVNSLMDGKQYQALVTPGGNAPIKDIIVNLFGARFEKGTILDIIQQ 244
Query: 136 LEPVAIC---------KSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLV 186
+IC K D K+ G++S G GR+ DRQ+ + N RP+D K+ ++
Sbjct: 245 EPDESICSLYGISDHSKFDDIKITGYISSCVHGQGRSTADRQFIYFNKRPIDYSKLCRIA 304
Query: 187 NELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPN 246
NE+Y+ N QY + I+ VP + DVNV PDKR VFF E + LR L ++P+
Sbjct: 305 NEVYQQYNRGQYCMLILFVDVPPESIDVNVAPDKRSVFFEREKELFALLRASLLATFAPH 364
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 48/78 (61%), Gaps = 4/78 (5%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I I V +IC GQVI L+ A KEL++NSLDA A +IE+ +++ G E +VVD+G G
Sbjct: 13 IHTIPIDVCRKICTGQVIITLAGACKELIDNSLDAQAKTIEVRVRKMGFERMEVVDDGIG 72
Query: 72 ISPNNFKVRAVFLCQAYA 89
I NF LC+ ++
Sbjct: 73 IHSLNFDA----LCKPHS 86
>gi|451820047|ref|YP_007456248.1| DNA mismatch repair protein MutL [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
gi|451786026|gb|AGF56994.1| DNA mismatch repair protein MutL [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
Length = 658
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 100/195 (51%), Gaps = 23/195 (11%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFER----LSQSTVLNQQPLLRPLK 669
F + +IGQ+N +I+G+ D L+++DQHAA EK FE+ + T++ QPL+ P
Sbjct: 467 FPALSIIGQYNKTYILGEYDGTLYMIDQHAAHEKILFEKYLKEIEMGTII-IQPLMVPSI 525
Query: 670 LDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIS 729
+DL+ ++ + D+ + GF LEE G LK VP+ G + KDL
Sbjct: 526 IDLSIDDYSYYEENKDVFKAAGFLLEE----FGGNSLSLKEVPY----FLGRLNPKDLFL 577
Query: 730 TLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLA 789
+ DN + + +A++AC+++I D L NEM K++E L
Sbjct: 578 DILDNLK----------NLGNGKTIEVKHNAIATKACKAAIKANDKLDINEMVKLIEDLR 627
Query: 790 DLNSPWNCPHGRPTM 804
++ P++CPHGRP +
Sbjct: 628 YIDDPFHCPHGRPVI 642
Score = 52.8 bits (125), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 54/93 (58%), Gaps = 2/93 (2%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I +++ ++I AG+V++ +S VKELVENS+DA A +I I ++E G +++D+G G
Sbjct: 4 INILSEDTANKIAAGEVVERPASVVKELVENSIDANAQNIVIEIEEGGTALIRIIDDGDG 63
Query: 72 ISPNNFKVRAVFLCQAYALIAKGVRFVCTNTTG 104
I ++ + FL A + I + +T G
Sbjct: 64 IYKDD--IAKAFLPHATSKIKESEDIFNISTLG 94
Score = 44.7 bits (104), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 59/120 (49%), Gaps = 6/120 (5%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSG-RNLGDRQY 169
VL T G+ LKD I T++G I + + + SD V G++ K G RN Q
Sbjct: 196 VLHTFGNGELKDVIRTIYGKVITDNIIYFS-ETSDLITVYGYIGKEEIARGSRN---NQS 251
Query: 170 FFVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDE 228
FVN R + ++ V + +K ++ ++P I+ V DVN+ P K +V F+DE
Sbjct: 252 IFVNKRYIKNKALTVAVEQAFKSFSTVNKFPFFILYIEVYPEYVDVNIHPTKAEVKFNDE 311
>gi|393214036|gb|EJC99530.1| DNA mismatch repair protein MutL, partial [Fomitiporia mediterranea
MF3/22]
Length = 354
Score = 100 bits (249), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 90/178 (50%), Gaps = 25/178 (14%)
Query: 84 LCQAYALIA-----KGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP 138
+ AYAL+ KGVR + K KS L+T G SLK +I +++G + L
Sbjct: 177 ILTAYALVPCTKENKGVRLNVVHILDKGRKSDQLRTDGKPSLKASISSLWGPKQVDSLTD 236
Query: 139 VAI--------------------CKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVD 178
+++ + KV G +SK G GR DRQ+FF+N RP +
Sbjct: 237 LSLDLEVVPEKTVLRRQGNADHDGSTTKVKVRGLISKFSPGHGRAGPDRQFFFINGRPCN 296
Query: 179 LPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALR 236
K+ K NE+Y+ N+ Q P + +FIVPT + DVNV+PDKR + E +++ AL+
Sbjct: 297 PSKIQKAFNEVYRSFNTNQSPFIVADFIVPTDSYDVNVSPDKRTILIHSENALVDALK 354
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 53/66 (80%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ I K VHRI +GQV+ DL +AVKELVENSLDAGAT+I++ K+YG + F+V+DNG G
Sbjct: 2 IKSIEKSSVHRITSGQVLVDLQTAVKELVENSLDAGATTIDVKFKDYGLQSFEVIDNGSG 61
Query: 72 ISPNNF 77
I+P ++
Sbjct: 62 IAPEDY 67
>gi|384252487|gb|EIE25963.1| Nhpms2 complexed with Adp [Coccomyxa subellipsoidea C-169]
Length = 357
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 89/189 (47%), Gaps = 38/189 (20%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICK 143
L QAYA+I+ GVR +CTN G ++ ++ TQG +S++DNI+TVFG L P+
Sbjct: 177 LLQAYAIISTGVRIICTNQVGTGPRTRIISTQGLASMRDNIVTVFGSRTAEALIPLDEAS 236
Query: 144 SDSCKVEG---------------------------FLSKPGQGSGRNLGDRQYFFVNDRP 176
++ + G F+S+ G+ G+R YFF+N RP
Sbjct: 237 TNEISMHGCASTLHGHMEGRCSCMSSASNGRCFLRFVSRASASFGKLAGERHYFFLNGRP 296
Query: 177 VDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALR 236
+ AN R P A ++ +P + D+NVTPDKRK E AL
Sbjct: 297 -----TYRTYTSCGNAANVR--PTAFVDIRLPKDSYDINVTPDKRKALIHQE----QALL 345
Query: 237 EGLQEIYSP 245
E Q++++P
Sbjct: 346 EAFQKVHAP 354
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 53/67 (79%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I P+ VHRI +GQVI DL++AVKEL+EN+LDAGAT+IEI LKEYG E +V DNGCG
Sbjct: 5 IAPVPAATVHRIASGQVILDLATAVKELLENALDAGATNIEIKLKEYGSELIEVADNGCG 64
Query: 72 ISPNNFK 78
IS N++
Sbjct: 65 ISNENYR 71
>gi|403386460|ref|ZP_10928517.1| hypothetical protein CJC12_01112 [Clostridium sp. JC122]
Length = 640
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 113/213 (53%), Gaps = 24/213 (11%)
Query: 606 ERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQST---VLNQQ 662
E+L K F +++IGQFN +I+G+ +++L ++DQHAA EKY FE+ +S + Q
Sbjct: 443 EKLISK--FPPIRIIGQFNNTYIVGECNKELILIDQHAAHEKYLFEKYKKSIENLSVVSQ 500
Query: 663 PLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVE 722
L+ P+ L+L+ +E + ++ K GF++EE + +R VP + G
Sbjct: 501 LLITPIILELSFDEYPYYEENREVFIKAGFNIEEFGNNTISIR----EVP----MFLGKP 552
Query: 723 DVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQ 782
D K L + D+ M T ++V + +A+ AC++++ D L EM+
Sbjct: 553 DFKTLFYDILDDLK--------NMGTGNTVDIKYNK--IATLACKAAVKANDKLTIKEME 602
Query: 783 KILEHLADLNSPWNCPHGRPTMRHLVDLTTIRK 815
K+LE L ++ P+ CPHGRPT + LT I K
Sbjct: 603 KLLEDLRYMDDPFTCPHGRPTTIKMT-LTEIEK 634
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 43/61 (70%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I ++K ++I AG+V++ SS VKEL+ENS+DA +++I I +++ G + ++ D+G G
Sbjct: 4 INVLDKATTNKIAAGEVVERASSVVKELIENSIDANSSNITIEIEDSGNKLIRICDDGYG 63
Query: 72 I 72
I
Sbjct: 64 I 64
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 116/274 (42%), Gaps = 36/274 (13%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICK 143
L AL GV F N GKNV + T G+ +++D I ++G + +
Sbjct: 174 LVLRLALANYGVSFKLINN-GKNV----ITTYGTENIEDTIRILYGKQVSENIISFE-SH 227
Query: 144 SDSCKVEGFL--SKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKG-ANSRQYPI 200
+D V G++ S+ +GS RN RQ FVN R + ++ V +K ++P
Sbjct: 228 NDIASVYGYIGNSEISRGS-RN---RQSIFVNKRLIKSSTITAAVENAFKSFLTVNKFPF 283
Query: 201 AIMNFIVPTRACDVNVTPDKRKVFFSDECSIL--------HALREGLQEIYSPNNASYSV 252
++ + D NV P K ++ F DE SI ALRE L+E S+ V
Sbjct: 284 FVLFLDIFPEYIDPNVHPSKAEIKFYDERSIFKLVFNAVHQALREYLRE-------SFEV 336
Query: 253 NKVEQLIEPEKSGPSSGAESCMFLEQLSPDGNGCIEILNEQQISKGNTPKTVEVDTLHSD 312
++ L E EK E E + D LN+ ++ +T+ VD ++D
Sbjct: 337 DEEVNLKELEKVEEIPKVEYKQ--ESIHKDFFQNNIDLNKIKL------ETLPVDLKNND 388
Query: 313 ALEGLVHSSNENGKGNFTLKAHDDKSADRLSKFN 346
+V E KG TL A+ + + D++ N
Sbjct: 389 IEINMVKEDKEEFKGKTTLNAYINDAEDKIETVN 422
>gi|251780192|ref|ZP_04823112.1| DNA mismatch repair protein MutL [Clostridium botulinum E1 str.
'BoNT E Beluga']
gi|243084507|gb|EES50397.1| DNA mismatch repair protein MutL [Clostridium botulinum E1 str.
'BoNT E Beluga']
Length = 676
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 101/195 (51%), Gaps = 23/195 (11%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQ---QPLLRPLKL 670
F +K+IGQ+N +I+G+ L+++DQHAA EK FE+ QPL+ P +
Sbjct: 485 FPAIKIIGQYNKTYILGEYAGTLYMIDQHAAHEKIMFEKYLNDINCGDIIIQPLMIPTVI 544
Query: 671 DLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIST 730
DL+ ++ + D+ ++ GF++EE G LK VP+ G K+L
Sbjct: 545 DLSMDDYSYFEENKDVFKEAGFTIEE----FGGTSIALKEVPY----FLGKLKPKNLFLE 596
Query: 731 LADNQGECSIISSYKMDTADSVCPSRVRA-MLASRACRSSIMIGDALGRNEMQKILEHLA 789
+ DN + S + V+ +A++AC+S++ D+L EM K++E L
Sbjct: 597 ILDN-----------LKNLGSGKTTEVKYNAIATKACKSAVKGNDSLDELEMVKLIEELR 645
Query: 790 DLNSPWNCPHGRPTM 804
++ P++CPHGRPT+
Sbjct: 646 YIDDPFHCPHGRPTI 660
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 53/93 (56%), Gaps = 2/93 (2%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I +N+ ++I AG+V++ +S VKELVEN++DA + +I I ++E G +++D+G G
Sbjct: 4 INILNEDTANKIAAGEVVERPASVVKELVENAIDANSKNILIEIEEGGSSLIRIIDDGDG 63
Query: 72 ISPNNFKVRAVFLCQAYALIAKGVRFVCTNTTG 104
I + + FL A + I + NT G
Sbjct: 64 IYKED--IEKAFLPHATSKIKESEDIYSINTLG 94
Score = 44.7 bits (104), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 93/198 (46%), Gaps = 31/198 (15%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICK--SDSCKVEGFLSKPGQGSGRNLGDRQ 168
++ T G+ ++KD I T++G +I +E V + SD + G++ K G + Q
Sbjct: 196 IVHTYGNGNMKDVIRTIYGKSI---VENVLYFEDTSDIATIYGYVGKEDIARGSR--NNQ 250
Query: 169 YFFVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSD 227
FVN R + + V + +K ++ ++P I+ + DVN+ P K +V F+D
Sbjct: 251 SIFVNSRYIKNRSLGIAVEQAFKSFSTVSKFPFFILFIEIYPEYIDVNIHPTKSEVKFND 310
Query: 228 E----CSILHALREGL-QEIYSPNNASYSVNKVEQLIEPEKSGPSSGAESCMFLEQLSPD 282
E I A+ L +E++S ++S+ PE+ ++ S + +E+++
Sbjct: 311 ERFIFKKIFGAVHTSLKEEVFS----TFSI--------PEEENEATSKNSNLNIEEIT-- 356
Query: 283 GNGCIEILNEQQISKGNT 300
+I EQ+ K NT
Sbjct: 357 ----FKIEEEQEKVKFNT 370
>gi|188588377|ref|YP_001921075.1| DNA mismatch repair protein [Clostridium botulinum E3 str. Alaska
E43]
gi|188498658|gb|ACD51794.1| DNA mismatch repair protein MutL [Clostridium botulinum E3 str.
Alaska E43]
Length = 676
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 101/195 (51%), Gaps = 23/195 (11%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQ---QPLLRPLKL 670
F +K+IGQ+N +I+G+ L+++DQHAA EK FE+ QPL+ P +
Sbjct: 485 FPPIKIIGQYNKTYILGEYAGTLYMIDQHAAHEKIMFEKYLNDINCGDIIIQPLMIPTVI 544
Query: 671 DLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIST 730
DL+ ++ + D+ ++ GF++EE G LK VP+ G K+L
Sbjct: 545 DLSMDDYSYFEENKDVFKEAGFTIEE----FGGTSIALKEVPY----FLGKLKPKNLFLE 596
Query: 731 LADNQGECSIISSYKMDTADSVCPSRVRA-MLASRACRSSIMIGDALGRNEMQKILEHLA 789
+ DN + S + V+ +A++AC+S++ D+L EM K++E L
Sbjct: 597 ILDN-----------LKNLGSGKTTEVKYNAIATKACKSAVKGNDSLDELEMVKLIEELR 645
Query: 790 DLNSPWNCPHGRPTM 804
++ P++CPHGRPT+
Sbjct: 646 YIDDPFHCPHGRPTI 660
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 53/93 (56%), Gaps = 2/93 (2%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I +N+ ++I AG+V++ +S VKELVEN++DA + +I I ++E G +++D+G G
Sbjct: 4 INILNEDTANKIAAGEVVERPASVVKELVENAIDANSKNILIEIEEGGSSLIRIIDDGDG 63
Query: 72 ISPNNFKVRAVFLCQAYALIAKGVRFVCTNTTG 104
I + + FL A + I + NT G
Sbjct: 64 IYKED--IEKAFLPHATSKIKEPEDIYSINTLG 94
Score = 43.5 bits (101), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 59/124 (47%), Gaps = 6/124 (4%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIY-NCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQY 169
++ T G+ ++KD I T++G +I N L C D + G++ K G + Q
Sbjct: 196 IIHTYGNGNMKDVIRTIYGKSIVENILYFEDTC--DIATIYGYVGKEDIARGSR--NNQS 251
Query: 170 FFVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDE 228
FVN R + + V + +K ++ ++P I+ + DVN+ P K +V F+DE
Sbjct: 252 IFVNSRYIKNRSLGIAVEQAFKSFSTVSKFPFFILFIEIYPEYIDVNIHPTKSEVKFNDE 311
Query: 229 CSIL 232
I
Sbjct: 312 RFIF 315
>gi|70940514|ref|XP_740663.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56518530|emb|CAH84055.1| hypothetical protein PC300836.00.0 [Plasmodium chabaudi chabaudi]
Length = 357
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 94/166 (56%), Gaps = 7/166 (4%)
Query: 84 LCQAYALIAKGVRFVCTNTT---GKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVA 140
L Q YA+I ++F+ N G +L T GS +K N ++FG L +
Sbjct: 176 LMQQYAIIYHEIKFMIFNIVTQKGSTKNMNMLITNGSDDIKKNFYSIFGKKTIGNLIDLN 235
Query: 141 ICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPK-VSKLVNELYKGANSRQYP 199
I K+++ V+G++S SGR D Q++++N RP+ + K V+K++N +Y+ NSR YP
Sbjct: 236 I-KNENWLVKGYISDSN--SGRRDKDLQFYYMNSRPIHVIKNVNKIINTIYREFNSRLYP 292
Query: 200 IAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSP 245
I I N I + D+NVTPDKR+VFF+ E + ++ L ++ +P
Sbjct: 293 IIICNIISDAKNIDINVTPDKREVFFTFENELCEQIKIELIKLLTP 338
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 45/67 (67%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ I +H IC+ QVI LS+ VKELVENS+DAGAT I++ L E G + +V DNG G
Sbjct: 3 IKSIGDESIHNICSSQVIFTLSNVVKELVENSIDAGATEIKVKLVENGIKLIEVSDNGNG 62
Query: 72 ISPNNFK 78
I NF+
Sbjct: 63 IKKINFE 69
>gi|328723290|ref|XP_001947410.2| PREDICTED: mismatch repair endonuclease PMS2-like [Acyrthosiphon
pisum]
Length = 364
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 93/165 (56%), Gaps = 9/165 (5%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCL--- 136
+ + + Y L+A V+ C N T K++ +V+L T GS+++ +NI ++G N L
Sbjct: 173 KMIQVVTGYCLVATQVKLSCINQT-KSMNNVLLSTHGSNTVLENISCIYGSKQANSLLVL 231
Query: 137 -EPVAICKSDSC----KVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYK 191
+ + + + + +++G++S GR+ DRQ++F+N RP + KV K VNE+Y
Sbjct: 232 KKVIPVDEENDIPNIFELDGYISSCDHNGGRSSKDRQFYFINSRPCEPLKVIKTVNEVYH 291
Query: 192 GANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALR 236
N QYP +N + D+NVTPDKR++F S+E ++ ++
Sbjct: 292 QYNQNQYPFVYLNITIARAEVDINVTPDKRQIFLSNENYLVSIIK 336
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/74 (58%), Positives = 60/74 (81%)
Query: 9 SPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDN 68
S I+PINK VH+IC+GQV+ +L++AVKEL+ENSLDAGATS+ I LKE+G++ +V DN
Sbjct: 2 SSQIKPINKLDVHKICSGQVVLNLATAVKELIENSLDAGATSVGIKLKEFGKDLVEVTDN 61
Query: 69 GCGISPNNFKVRAV 82
G G+ P+NF+ A+
Sbjct: 62 GSGVHPDNFEGLAL 75
>gi|182419526|ref|ZP_02950776.1| DNA mismatch repair protein MutL [Clostridium butyricum 5521]
gi|182376613|gb|EDT74187.1| DNA mismatch repair protein MutL [Clostridium butyricum 5521]
Length = 686
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 97/194 (50%), Gaps = 21/194 (10%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERL---SQSTVLNQQPLLRPLKL 670
F + +IGQ+N +I+G+ D L+++DQHAA EK FE+ +S + QPL+ P +
Sbjct: 495 FPPISIIGQYNKTYILGEYDGTLYMIDQHAAHEKIYFEKYLKDIESGDIIVQPLMIPSII 554
Query: 671 DLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIST 730
DLT ++ + +I + GF LEE G LK VP+ G + K L
Sbjct: 555 DLTIDDYSYFEENKEIFKDAGFILEE----FGGTSIALKEVPY----FLGKLNPKKLFIE 606
Query: 731 LADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLAD 790
+ DN + +A++AC+S+I D L NEM K++E L
Sbjct: 607 ILDNLKNL----------GNGKTTEVKHNAIATKACKSAIKGNDELQINEMVKLIEDLRY 656
Query: 791 LNSPWNCPHGRPTM 804
++ P++CPHGRP +
Sbjct: 657 IDDPFHCPHGRPII 670
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 55/93 (59%), Gaps = 2/93 (2%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I +N+ ++I AG+V++ SS VKELVENS+DA + +I I +++ G +++D+G G
Sbjct: 4 INILNEDTANKIAAGEVVERPSSVVKELVENSIDAASKNITIEIEDGGTSLIRIIDDGDG 63
Query: 72 ISPNNFKVRAVFLCQAYALIAKGVRFVCTNTTG 104
+ ++ ++ F+ A + I K +T G
Sbjct: 64 VFKDD--IKKAFMPHATSKITKSEDIYNISTLG 94
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 62/127 (48%), Gaps = 6/127 (4%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSG-RNLGDRQY 169
V+ T G++ +KD + T++G +I + + SD + G++ K G RN Q
Sbjct: 196 VIHTFGNNDIKDTLRTIYGKSITDNIIYFE-DSSDLVTIHGYVGKEDIARGSRN---NQS 251
Query: 170 FFVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDE 228
FVN R + ++ V + +K ++ ++P ++ + DVN+ P K ++ F+DE
Sbjct: 252 IFVNKRYIKNKSLAVAVEQAFKSFSTVNKFPFFVLFVEIYPEYVDVNIHPTKAEIKFNDE 311
Query: 229 CSILHAL 235
+ +
Sbjct: 312 RMVFKKI 318
>gi|390597110|gb|EIN06510.1| DNA mismatch repair protein MutL [Punctularia strigosozonata
HHB-11173 SS5]
Length = 380
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/184 (32%), Positives = 93/184 (50%), Gaps = 27/184 (14%)
Query: 80 RAVFLCQAYALIA-----KGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFG----- 129
+A+ L AYAL+ KG+R N KSV ++T G+ S + +I ++G
Sbjct: 192 KALGLLNAYALVPCAAENKGIRLSVYNQPKGGKKSVQIQTTGAPSTRASISALWGPKALE 251
Query: 130 ------MNIYNCLEPVAICKSDSCK-----------VEGFLSKPGQGSGRNLGDRQYFFV 172
+ + ++ VA + S + + G +SK G GR DRQ+FFV
Sbjct: 252 NLVDLDIQLDVTIDKVARKRISSGEDDPAPEYTHVGIRGLISKFQIGCGRTGTDRQFFFV 311
Query: 173 NDRPVDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSIL 232
N RP + KV K NE+Y+ N Q P + +F++P CD+NV+PDKR +F E +++
Sbjct: 312 NGRPWNPGKVQKAFNEVYRSYNIHQSPFIVADFLLPGNTCDINVSPDKRTIFIHSEINLI 371
Query: 233 HALR 236
AL+
Sbjct: 372 QALK 375
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/72 (55%), Positives = 57/72 (79%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
+I+ +++ VHRI +GQV+ DL +AVKELVENSLDAGATSIE+ K+YG + +VVDNGC
Sbjct: 21 SIKALDRTSVHRITSGQVVVDLQTAVKELVENSLDAGATSIEVRFKDYGLQSIEVVDNGC 80
Query: 71 GISPNNFKVRAV 82
GI+ +++ A+
Sbjct: 81 GIAEQDWESVAL 92
>gi|260887306|ref|ZP_05898569.1| DNA mismatch repair protein MutL [Selenomonas sputigena ATCC 35185]
gi|330838940|ref|YP_004413520.1| DNA mismatch repair protein MutL [Selenomonas sputigena ATCC 35185]
gi|260862942|gb|EEX77442.1| DNA mismatch repair protein MutL [Selenomonas sputigena ATCC 35185]
gi|329746704|gb|AEC00061.1| DNA mismatch repair protein MutL [Selenomonas sputigena ATCC 35185]
Length = 640
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 98/192 (51%), Gaps = 21/192 (10%)
Query: 615 GRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQST--VLNQQPLLRPLKLDL 672
G + IGQ +L +II K L+IVDQHAA E+ +++ S + +QQ L+ P+ L
Sbjct: 453 GGITPIGQVDLCYIIAKDKDGLYIVDQHAAHERILYDKFSAMAERIPSQQLLVHPI-LSF 511
Query: 673 TPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLA 732
E + S + ++ R+ GF +E A FRLK VP ++ + ++++++ L
Sbjct: 512 DAREAALVSENQELFRRLGFDME----ACGERDFRLKEVPADVPVSEAEDMIREILARLY 567
Query: 733 DNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLN 792
D ++ A LA+ ACR++I GD L +MQ +LE L+
Sbjct: 568 DMH--------------ETTAQEIRHACLATMACRAAIKSGDELNFRQMQIVLEELSQTA 613
Query: 793 SPWNCPHGRPTM 804
P+ CPHGRPT+
Sbjct: 614 RPYTCPHGRPTI 625
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 46/68 (67%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I ++ +++I AG+V++ +S VKELVENS+DAGAT IE+ + G +V DNGCG
Sbjct: 4 IHVLDDNTINKIAAGEVVERPASVVKELVENSIDAGATKIEVEIMAGGTSLMRVTDNGCG 63
Query: 72 ISPNNFKV 79
+S + K+
Sbjct: 64 MSLEDAKL 71
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 74/151 (49%), Gaps = 11/151 (7%)
Query: 114 TQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQ-GSGRNLGDRQYFFV 172
T G+ SL D I +++G + L ++ D K+ G+++KP S R Q F V
Sbjct: 199 TPGNGSLFDAIRSIYGSQAADALLALSFEDED-VKITGYITKPSMLKSSRAW---QTFIV 254
Query: 173 NDRPVDLPKVSKLVNELYKGANSRQ-YPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSI 231
N R + ++K ++ Y + +P+ ++N VP R+ DVNV P K ++ F DE I
Sbjct: 255 NGRIISNKAIAKAIDNAYHSLLPKSGFPMVVLNIAVPQRSVDVNVHPQKSEMKFEDEGRI 314
Query: 232 LHALREGLQEIYSP-----NNASYSVNKVEQ 257
A+ + + + P + + SV VE+
Sbjct: 315 FKAVYKTVVDAIRPVGQTLEDVAASVQNVER 345
>gi|402833045|ref|ZP_10881667.1| DNA mismatch repair protein, C-terminal domain protein [Selenomonas
sp. CM52]
gi|402281412|gb|EJU30047.1| DNA mismatch repair protein, C-terminal domain protein [Selenomonas
sp. CM52]
Length = 640
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 96/187 (51%), Gaps = 21/187 (11%)
Query: 620 IGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQST--VLNQQPLLRPLKLDLTPEEE 677
IGQ +L +II K L+IVDQHAA E+ +++ S + +QQ L+ P+ L E
Sbjct: 458 IGQVDLCYIIAKDKDGLYIVDQHAAHERILYDKFSAMAERIPSQQLLVHPI-LSFDAREA 516
Query: 678 VVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGE 737
+ S + ++ R+ GF +E A FRLK VP ++ + V+++++ L D
Sbjct: 517 ALVSENQELFRRLGFDME----ACGERDFRLKEVPADVPVSEAEDMVREILARLYDMH-- 570
Query: 738 CSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNC 797
++ A LA+ ACR++I GD L +MQ +LE L+ P+ C
Sbjct: 571 ------------ETTAQEIRHACLATMACRAAIKSGDELNFRQMQIVLEELSQTARPYTC 618
Query: 798 PHGRPTM 804
PHGRPT+
Sbjct: 619 PHGRPTI 625
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 46/68 (67%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I ++ +++I AG+V++ +S VKELVENS+DAGAT IE+ + G +V DNGCG
Sbjct: 4 IHVLDDNTINKIAAGEVVERPASVVKELVENSIDAGATKIEVEIMAGGTSLMRVTDNGCG 63
Query: 72 ISPNNFKV 79
+S + K+
Sbjct: 64 MSLEDAKL 71
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 74/151 (49%), Gaps = 11/151 (7%)
Query: 114 TQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQ-GSGRNLGDRQYFFV 172
T G+ SL D I +++G + L ++ D K+ G+++KP S R Q F V
Sbjct: 199 TPGNGSLFDAIRSIYGSQAADALLALSFEDED-VKITGYITKPSMLKSSRAW---QTFIV 254
Query: 173 NDRPVDLPKVSKLVNELYKGANSRQ-YPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSI 231
N R + ++K ++ Y + +P+ ++N VP R+ DVNV P K ++ F DE I
Sbjct: 255 NGRIISNKAIAKAIDNAYHSLLPKSGFPMVVLNITVPQRSVDVNVHPQKSEMKFEDEGRI 314
Query: 232 LHALREGLQEIYSP-----NNASYSVNKVEQ 257
A+ + + + P + + SV VE+
Sbjct: 315 FKAVYKAVVDAIRPVGQTLEDVAASVQNVER 345
>gi|359412948|ref|ZP_09205413.1| DNA mismatch repair protein mutL [Clostridium sp. DL-VIII]
gi|357171832|gb|EHJ00007.1| DNA mismatch repair protein mutL [Clostridium sp. DL-VIII]
Length = 662
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 103/196 (52%), Gaps = 25/196 (12%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFER----LSQSTVLNQQPLLRPLK 669
F + +IGQ+N +I+G+ D L+++DQHAA EK FE+ + T++ QPL+ P
Sbjct: 471 FPPISIIGQYNKTYILGEYDGTLYMIDQHAAHEKILFEKYLKEIENGTII-IQPLIVPSI 529
Query: 670 LDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIS 729
+DL+ ++ + +I ++ GF LEE G LK VP+ G + K L
Sbjct: 530 IDLSMDDYSYFEENKEIFKQAGFLLEE----FGGTSLSLKEVPY----FLGKLNPKSLFL 581
Query: 730 TLADNQGECSIISSYKMDTADSVCPSRVRA-MLASRACRSSIMIGDALGRNEMQKILEHL 788
+ DN + + S V+ +A++AC+++I D L NEM K++E L
Sbjct: 582 DILDN-----------LKNLGNGKTSEVKHNAIATKACKAAIKGNDKLEVNEMIKLIEDL 630
Query: 789 ADLNSPWNCPHGRPTM 804
++ P++CPHGRP +
Sbjct: 631 RFIDDPFHCPHGRPVI 646
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I +N+ ++I AG+V++ SS VKELVENS+DA + +I I ++E G +++D+G G
Sbjct: 4 INILNEDTANKIAAGEVVERPSSVVKELVENSIDANSKNITIEIEEGGISLIRIIDDGEG 63
Query: 72 ISPNNFKVRAVFLCQA 87
I ++ + FL A
Sbjct: 64 IYKDD--IAKAFLPHA 77
Score = 42.4 bits (98), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 62/128 (48%), Gaps = 8/128 (6%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLS--KPGQGSGRNLGDRQ 168
+L T G+ LKD I T++G +I + + SD V G++ + +GS N Q
Sbjct: 196 ILHTFGNGELKDVIRTIYGKSITDNILYFNDA-SDLITVYGYVGTEEIARGSRNN----Q 250
Query: 169 YFFVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSD 227
FVN R + ++ V + +K ++ ++P I+ V DVN+ P K +V F+D
Sbjct: 251 SVFVNKRYIKNRALAIAVEQAFKSFSTVNKFPFFILFIEVYPEYVDVNIHPTKAEVKFND 310
Query: 228 ECSILHAL 235
E I +
Sbjct: 311 ERMIFQKI 318
>gi|317052213|ref|YP_004113329.1| DNA mismatch repair protein MutL [Desulfurispirillum indicum S5]
gi|316947297|gb|ADU66773.1| DNA mismatch repair protein MutL [Desulfurispirillum indicum S5]
Length = 595
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 97/193 (50%), Gaps = 22/193 (11%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLN---QQPLLRPLKLDLT 673
+++GQF FI+G D++L +VDQHAA E+ NFE +S N QQPLL P + LT
Sbjct: 406 FQILGQFQDTFIVGIKDEELILVDQHAAMERINFEEISDLYADNRVEQQPLLFPHPIGLT 465
Query: 674 PEEEVVASMHMDIIRKNGFSLE--EDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTL 731
P+E++ + HM ++ GF+++ +D L P ++ ++++
Sbjct: 466 PQEQLTLNTHMPQLQAMGFTIDIIDDTACLV-------EAPLDLPPQQAMDTIREI---- 514
Query: 732 ADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADL 791
CS K D +S S + ++ + AC S+ L +M+++L+ L
Sbjct: 515 ------CSRAGEEKDDQPESAQESFRQLVMKTMACHRSVKANKTLNHQQMEELLQRLFQC 568
Query: 792 NSPWNCPHGRPTM 804
P+ CPHGRPT+
Sbjct: 569 RQPYTCPHGRPTL 581
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 41/55 (74%)
Query: 19 VVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGIS 73
V+++I AG+V++ + VKELVEN+LDA A +EIA++ G + ++ D+GCG++
Sbjct: 10 VINQIAAGEVVERPVNVVKELVENALDADARRVEIAIEGGGIKRIRITDDGCGMA 64
>gi|294496663|ref|YP_003543156.1| DNA mismatch repair protein MutL [Methanohalophilus mahii DSM 5219]
gi|292667662|gb|ADE37511.1| DNA mismatch repair protein MutL [Methanohalophilus mahii DSM 5219]
Length = 597
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 97/190 (51%), Gaps = 23/190 (12%)
Query: 618 KVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEE 677
+++GQ N +I+ + D+ L ++DQHAA E+ +E+LS+ + Q L+ P+ +DLT E+
Sbjct: 411 RILGQVNDLYIVAETDEGLLLIDQHAAHERIMYEQLSRRVKHDWQELISPVTVDLTTREK 470
Query: 678 VVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVED---VKDLISTLADN 734
V+ ++ + GFSL E + + VP + +ED V DL++ L +
Sbjct: 471 VLLEEYIPYLENLGFSLSE----FGTQTYVITTVP---TVMGKIEDPSVVHDLLADLFE- 522
Query: 735 QGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSP 794
QG K D +C + ACRS+I G +MQ +L+ L +P
Sbjct: 523 QGRV----KEKKGMEDMLC--------KTMACRSAIKAGAPCNMEQMQNLLDQLEKTENP 570
Query: 795 WNCPHGRPTM 804
+ CPHGRPTM
Sbjct: 571 YTCPHGRPTM 580
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 73/154 (47%), Gaps = 10/154 (6%)
Query: 89 ALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCK 148
AL GV F N GK VVL+ G L D ++ V G ++ L P+ K D
Sbjct: 182 ALGNPGVAFTLLNE-GK----VVLRC-GKGELFDRMVQVLGADVARQLIPLE-YKDDLLS 234
Query: 149 VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVN-ELYKGANSRQYPIAIMNFIV 207
+ G++SKPG R+ + YFFVN R + P +S V Y +YP A++N +
Sbjct: 235 LWGYISKPGYY--RSNREMNYFFVNGRNISSPAISNAVRLGYYTMLPKGRYPAAVLNVRI 292
Query: 208 PTRACDVNVTPDKRKVFFSDECSILHALREGLQE 241
DVNV P KR V S E I+ + +++
Sbjct: 293 NLEEVDVNVHPAKRYVRLSRENEIMDGITAAVEQ 326
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 43/61 (70%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I +++ +++I AG+VI+ +S VKEL++NSLDAGA+ I + ++ G + V+D+G G
Sbjct: 7 IHLLDEATINQIAAGEVIERPASVVKELIDNSLDAGASDIRVEIEGAGSKSITVIDDGSG 66
Query: 72 I 72
I
Sbjct: 67 I 67
>gi|354612227|ref|ZP_09030179.1| DNA mismatch repair protein mutL [Halobacterium sp. DL1]
gi|353191805|gb|EHB57311.1| DNA mismatch repair protein mutL [Halobacterium sp. DL1]
Length = 672
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 96/203 (47%), Gaps = 26/203 (12%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEE 676
M+V+GQ +++ + D L +VDQHAADE+ ++ERL Q L+ P++L+LT E
Sbjct: 477 MRVLGQLAGTYVVAETDDGLVLVDQHAADERVHYERLRARLDGTSQALVEPVELELTAGE 536
Query: 677 EVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQG 736
V + +R GF L G R R++AVP E +D+++ G
Sbjct: 537 AAVFDAALAALRDLGFEA-----TLEGRRARVEAVPAVLADALDPELARDVLAAFVAETG 591
Query: 737 ECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWN 796
S D AD +LA ACR ++ +L + +L+ L D +P+
Sbjct: 592 -----SDPAGDAADD--------LLADMACRPAVTGNTSLAEGRVVALLDALDDCENPFA 638
Query: 797 CPHGRPTMRHLVDLTTIRKNIDE 819
CPHGRPT+ IR + DE
Sbjct: 639 CPHGRPTL--------IRVDADE 653
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 47/71 (66%)
Query: 9 SPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDN 68
S IR ++ V +I AG+V++ +S VKELVENSLDAGA+SI++ ++ G + V D+
Sbjct: 2 SERIRQLDDATVAQIAAGEVVERPASVVKELVENSLDAGASSIDVTVENGGIDRIVVADD 61
Query: 69 GCGISPNNFKV 79
G G++ + +
Sbjct: 62 GRGMTGEDLRA 72
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 62/136 (45%), Gaps = 12/136 (8%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSC-KVEGFLSKPGQGSGRNLGDRQY 169
V T G+ ++D + V+G + L V +V G++S P R+Y
Sbjct: 198 VFATTGTGDVRDAALAVYGREVAQSLREVDAAPGGPVERVHGYVSDPEV----TRATREY 253
Query: 170 F--FVNDRPVDLPKVSKLVNELYKG--ANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFF 225
FVN R V + + V + Y G AN R YP A++ V D NV P K +V F
Sbjct: 254 LATFVNGRSVRDAVLREAVLDAYGGQLANDR-YPFAVL--FVEVDGVDANVHPRKMEVRF 310
Query: 226 SDECSILHALREGLQE 241
DE + A+RE +++
Sbjct: 311 EDEEGVKRAVREAVRD 326
>gi|315651394|ref|ZP_07904419.1| DNA mismatch repair protein MutL [Lachnoanaerobaculum saburreum DSM
3986]
gi|315486353|gb|EFU76710.1| DNA mismatch repair protein MutL [Lachnoanaerobaculum saburreum DSM
3986]
Length = 652
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 106/201 (52%), Gaps = 23/201 (11%)
Query: 608 LFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERL---SQSTVLNQQPL 664
F E MKV+GQ + I +L+++L+I+DQHAA EK +ERL S+ L+ Q +
Sbjct: 455 FFDSESKKYMKVVGQVFDTYWIVQLEKELYIIDQHAAHEKVMYERLLKESKENRLSSQMI 514
Query: 665 LRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDV 724
P+ + LT E+ V HMD RK GF +EE G +++ ++P I +
Sbjct: 515 NPPVIVTLTDIEQNVLKDHMDEFRKIGFDIEE----FGGKEYKINSIP---NIFPSIPKA 567
Query: 725 KDLISTLADNQGECSIISSYKMDTADSVCPSR-VRAMLASRACRSSIMIGDALGRNEMQK 783
+ L+D+ ++Y D + PS + A +AS AC+++I + E +
Sbjct: 568 ELFNEMLSDS-------TNY-----DIISPSELILAKVASMACKAAIKGNMRISLLEANE 615
Query: 784 ILEHLADLNSPWNCPHGRPTM 804
+ + L L++P+NCPHGRPT+
Sbjct: 616 LFDELLSLDNPYNCPHGRPTV 636
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 56/93 (60%), Gaps = 2/93 (2%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I ++K V +I AG+V++ +S VKE++ENS+DAG++ I + +K G + ++ DNGCG
Sbjct: 2 INILDKNTVDKIAAGEVVERPASIVKEILENSIDAGSSLITVEIKNGGTDLIRITDNGCG 61
Query: 72 ISPNNFKVRAVFLCQAYALIAKGVRFVCTNTTG 104
I+ + +V+ FL A + I + + G
Sbjct: 62 IAAS--EVKKAFLRHATSKIISDKDLISIKSLG 92
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 70/144 (48%), Gaps = 14/144 (9%)
Query: 110 VVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPG-QGSGRNLGDRQ 168
+ L+T GS +LKD + ++G I L V K D K+ G +++P S RNL +
Sbjct: 193 IKLQTNGSGNLKDIVYQLYGKEISKALCNVD-YKKDGIKISGVVARPEVTRSSRNL---E 248
Query: 169 YFFVNDRPVDLPKVSKLVNELYKGANSR----QYPIAIMNFIVPTRACDVNVTPDKRKVF 224
FVN R + +SK + + G R QYP + F DVNV P K +V
Sbjct: 249 NIFVNGRYIKDNIISKAIED---GFGDRLMQHQYPFCALKF--ELDGVDVNVHPRKMEVR 303
Query: 225 FSDECSILHALREGLQEIYSPNNA 248
FSD + +E ++EI++ +A
Sbjct: 304 FSDRNFVYDNTKEAVEEIFTAQSA 327
>gi|403360310|gb|EJY79825.1| DNA mismatch repair enzyme (predicted ATPase) [Oxytricha trifallax]
Length = 636
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 96/172 (55%), Gaps = 3/172 (1%)
Query: 605 LERLFRKEDFGRMKVIGQFNLGFIIGKL-DQDLFIVDQHAADEKYNFERLSQSTVLNQQP 663
+++ F K++F +++V+GQFN GFI+ L D DLFI+DQHA DE+ + E ++ + QP
Sbjct: 450 MKKSFWKKEFLKLRVLGQFNAGFILCTLNDYDLFILDQHACDERLHLEMFTKQLKIESQP 509
Query: 664 LLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVED 723
+ P + D+ V ++ I + GF E+ ++ ++ ++P SK F D
Sbjct: 510 RIMPFEFDMDANLYNVVEIYERIFKAFGFQFEKVSWNRKTVQVKVTSMPRSKDQQFEESD 569
Query: 724 VKDLISTLADNQGECSIISSYKMD--TADSVCPSRVRAMLASRACRSSIMIG 773
+L++++ + + Y+ D + + P +++ +LA +ACR S+M+G
Sbjct: 570 FHNLVTSIRNFDSDEKAKMKYQSDPQIFEYLMPRKIQQILALQACRKSVMVG 621
>gi|429766909|ref|ZP_19299149.1| DNA mismatch repair protein [Clostridium celatum DSM 1785]
gi|429182792|gb|EKY23875.1| DNA mismatch repair protein [Clostridium celatum DSM 1785]
Length = 651
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 103/195 (52%), Gaps = 23/195 (11%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLS---QSTVLNQQPLLRPLKL 670
F ++++IGQFN +I+ + L+I+DQHAA EK +E+ ++ + Q LL P +
Sbjct: 460 FPKLRIIGQFNKTYILAEHLDTLYIIDQHAAHEKIIYEKYVKDIENKEIVVQSLLIPCIV 519
Query: 671 DLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIST 730
DL+ ++ ++DI +GF++EE G LK VP+ G D K+L+
Sbjct: 520 DLSFDDFECYKENIDIFINSGFTIEE----FGGNTIALKEVPY----FLGKLDAKNLLLE 571
Query: 731 LADNQGECSIISSYKMDTADSVCPSRVRA-MLASRACRSSIMIGDALGRNEMQKILEHLA 789
+ DN + S + V+ +AS ACR ++ D L + EM+K++ L
Sbjct: 572 MIDN-----------LKNLGSGKTTEVKLNKIASMACRKAVKANDYLTQIEMEKLISDLR 620
Query: 790 DLNSPWNCPHGRPTM 804
+++P+NCPHGRP +
Sbjct: 621 YIDNPFNCPHGRPII 635
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 21 HRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFKVR 80
++I AG+V++ SS VKELVENS+DA A +I + ++E G +V+D+G GI ++ +
Sbjct: 13 NKIAAGEVVERPSSVVKELVENSIDADAKNITVEIEEGGISLIRVIDDGNGIYRDD--IE 70
Query: 81 AVFLCQAYALIAKGVRFVCTNTTG 104
F+ A + I+ NT G
Sbjct: 71 KAFMPHATSKISSVEDIYSINTLG 94
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 82/177 (46%), Gaps = 18/177 (10%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSG-RNLGDRQY 169
++ T G +L + I T++G NI+ P + DS + G++ K G RN +
Sbjct: 196 IIHTYGDGNLSNVIRTIYGKNIWEYTLPFN-YEDDSLYIHGYIGKEDIARGSRN---NES 251
Query: 170 FFVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDE 228
FVN+R + + +K ++ ++P ++ V + DVN+ P K ++ F DE
Sbjct: 252 IFVNNRYIKNKTIVAAAENAFKSFSTVNKFPFFVLFIDVSPESVDVNIHPTKAEIKFKDE 311
Query: 229 --------CSILHALREGLQEIYSPNNASYSVNKVEQL---IEPEKSGPSSGAESCM 274
+I AL+E + + +S N+ + + E++ IE E + PS E +
Sbjct: 312 RIVYKRVFDAIHSALKEDIFKSFSENSIKENQEEFEEIKLNIE-ENNNPSVNEEVII 367
>gi|153811375|ref|ZP_01964043.1| hypothetical protein RUMOBE_01767 [Ruminococcus obeum ATCC 29174]
gi|149832502|gb|EDM87586.1| DNA mismatch repair domain protein [Ruminococcus obeum ATCC 29174]
Length = 626
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 108/202 (53%), Gaps = 21/202 (10%)
Query: 606 ERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQS---TVLNQQ 662
E+L E R+ +IGQ + + + + + +I+DQHAA EK +ER+ + ++ Q
Sbjct: 427 EKLLAPESRSRIDLIGQIFDTYWLVQFEDNFYIIDQHAAHEKVYYERMVKQFREHSIDSQ 486
Query: 663 PLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVE 722
L PL + L+ +EE V +M+ + GF +E G +R+ AVP + +G+
Sbjct: 487 YLNPPLIVALSMQEEEVLKANMNYFEQFGFEIEN----FGGREYRISAVPSN---LYGLT 539
Query: 723 DVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQ 782
+ ++L + DN + S+ DT D A LA+ AC++++ A+ + E +
Sbjct: 540 E-EELFLEMLDN-----LASNNSKDTLDIFA-----ARLATMACKAAVKGNHAMSQQEAE 588
Query: 783 KILEHLADLNSPWNCPHGRPTM 804
K+++ L L +P++CPHGRPT+
Sbjct: 589 KLIDELLTLENPYHCPHGRPTI 610
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 66/131 (50%), Gaps = 8/131 (6%)
Query: 108 KSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDR 167
K V L T G+ S+KD I +V+G I L V+ ++ K+EGF+ KP G+R
Sbjct: 130 KQVKLHTSGNYSVKDVIYSVYGREIARALLEVS-QENSFMKIEGFVGKPEIAR----GNR 184
Query: 168 QY--FFVNDRPVDLPKVSKLVNELYKG-ANSRQYPIAIMNFIVPTRACDVNVTPDKRKVF 224
+ +++N R V ++K + Y+G ++P + + DVNV P KR+V
Sbjct: 185 SFENYYINGRYVKNNIITKAIENAYRGFLMQHKFPFVSLRMEMEGNDLDVNVHPAKREVR 244
Query: 225 FSDECSILHAL 235
F+ E + A+
Sbjct: 245 FAREQEVYDAV 255
>gi|302670849|ref|YP_003830809.1| DNA mismatch repair protein MutL [Butyrivibrio proteoclasticus
B316]
gi|302395322|gb|ADL34227.1| DNA mismatch repair protein MutL [Butyrivibrio proteoclasticus
B316]
Length = 666
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 108/203 (53%), Gaps = 21/203 (10%)
Query: 606 ERLFRKEDFGRMKVIGQ-FNLGFIIGKLDQDLFIVDQHAADEKYNFERL---SQSTVLNQ 661
E++ KE+ +++GQ F +IIG D+ +F+VDQHAA EK N+ER+ +S +
Sbjct: 464 EKVLTKENVKEYEILGQIFGTYWIIGFKDK-MFMVDQHAAHEKVNYERMMKRYKSGDILS 522
Query: 662 QPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGV 721
Q + P+ + L+ EE + + K GF++E G + ++A+P FG
Sbjct: 523 QMVNPPVIVTLSAAEEEIFLEYRQYFEKLGFNIEN----FGGHEYAMRAIPVD---LFGC 575
Query: 722 EDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEM 781
++ K++ + D E S +T+ P + +AS AC++S+ + EM
Sbjct: 576 DNEKEMFQEILD---ELS------HETSLDRTPDVINYKIASMACKASVKGNTRMTTQEM 626
Query: 782 QKILEHLADLNSPWNCPHGRPTM 804
+ +L+ L L++P+NCPHGRPT+
Sbjct: 627 EALLDELLKLDNPYNCPHGRPTI 649
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I ++K + +I AG+V++ +S VKELVEN++D+GAT++ + +K G + +V DNG G
Sbjct: 4 INELDKNTIDQIAAGEVVERPASVVKELVENAIDSGATAVTVEIKGGGIDMIRVTDNGSG 63
Query: 72 ISPNNFKVRAVFLCQA 87
I + ++R F A
Sbjct: 64 IEKS--QIRKAFKRHA 77
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 67/135 (49%), Gaps = 6/135 (4%)
Query: 112 LKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQG-SGRNLGDRQYF 170
T G+ LK+ I ++G ++ + P++ VEG+L +P S RN + F
Sbjct: 197 FSTSGNGDLKELIYRIYGRDVSVSVRPIS-ASDHGITVEGYLGEPTLNRSNRNF---EIF 252
Query: 171 FVNDRPVDLPKVSKLVNELYKGA-NSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDEC 229
FVN R V +SK + E YK ++P AI++ + DVNV P K +V F+++
Sbjct: 253 FVNGRYVKDKIISKALEEGYKQYLMMHKFPFAILHIRMDPSMVDVNVHPAKLEVRFNNQA 312
Query: 230 SILHALREGLQEIYS 244
+ ++ ++ + S
Sbjct: 313 LLYDFIKTSVENVLS 327
>gi|404371185|ref|ZP_10976493.1| DNA mismatch repair protein MutL [Clostridium sp. 7_2_43FAA]
gi|226912692|gb|EEH97893.1| DNA mismatch repair protein MutL [Clostridium sp. 7_2_43FAA]
Length = 684
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 102/199 (51%), Gaps = 23/199 (11%)
Query: 610 RKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFER----LSQSTVLNQQPLL 665
R F +++IGQFN +I+ + D+ L+++DQHAA EK FE+ + + ++ QQ LL
Sbjct: 489 RNAKFPNLRIIGQFNKTYILAEYDEVLYMIDQHAAHEKILFEKYLKSIEEGDIVVQQ-LL 547
Query: 666 RPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVK 725
P +DLT ++ + + GFS+E G +K VP+ G D +
Sbjct: 548 VPTLIDLTTDDFCYYEENSKVFTMAGFSIEN----FGGNTIAIKEVPY----FLGKLDPR 599
Query: 726 DLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKIL 785
+L + DN I S V +R+ A+ AC++++ D L + EM+K++
Sbjct: 600 NLFINILDN------IKSLGSGKTTEVKYNRI----ATLACKAAVKANDYLNQMEMEKLI 649
Query: 786 EHLADLNSPWNCPHGRPTM 804
L ++ P++CPHGRP +
Sbjct: 650 NDLRYIDDPFHCPHGRPVI 668
Score = 53.1 bits (126), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 51/86 (59%), Gaps = 12/86 (13%)
Query: 21 HRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFKVR 80
++I AG+V++ SS VKELVENS+DA A +I I ++E G +++D+G GI ++ ++
Sbjct: 13 NKIAAGEVVERPSSVVKELVENSIDAEAKNITIEIEEGGISLIRIIDDGNGIHKDD--IK 70
Query: 81 AVFLCQA----------YALIAKGVR 96
F+ A Y+++ G R
Sbjct: 71 KAFMPHATSKIQNVEDIYSIMTLGFR 96
Score = 43.9 bits (102), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 61/136 (44%), Gaps = 8/136 (5%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKP--GQGSGRNLGDRQ 168
VL T G+ +LKD I TV+G I L D+ + G++ K +GS N Q
Sbjct: 196 VLHTYGTGNLKDVIRTVYGKTISENLIYFE-SAEDAIHLYGYIGKEEIARGSRNN----Q 250
Query: 169 YFFVNDRPVDLPKVSKLVNELYKG-ANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSD 227
FVN R + + + +K A ++P ++ V DVN+ P K ++ F +
Sbjct: 251 SIFVNGRYIKNKTIVAAIENAFKSFATVNKFPFFVLFLEVYPEFVDVNIHPTKAEIKFKE 310
Query: 228 ECSILHALREGLQEIY 243
+ I + + + + +
Sbjct: 311 DRGIFKKVFDAVHKAF 326
>gi|448566815|ref|ZP_21637070.1| DNA mismatch repair protein MutL [Haloferax prahovense DSM 18310]
gi|445713404|gb|ELZ65181.1| DNA mismatch repair protein MutL [Haloferax prahovense DSM 18310]
Length = 563
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 100/204 (49%), Gaps = 20/204 (9%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQ---STVLNQQPLLRPLKL 670
F +VIG+F +++ + +L +VDQHAA E+ N+ERL + S ++ P+ P +
Sbjct: 367 FDDRRVIGRFRGLYLLCEAGDELLVVDQHAAHERINYERLREAVESAGIDAVPVDPPATV 426
Query: 671 DLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIST 730
L+P + + + D++ K GF + E +R++AVP F + + D+++
Sbjct: 427 SLSPTDAALLDANRDLVEKLGFRVAEFGGGSGSGTYRVEAVPAPLGRPFAPDALADVVAD 486
Query: 731 LADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLAD 790
+A T D P +L AC SI GD L +E +++E L
Sbjct: 487 IA---------------TGDDADPRD--ELLKDLACHPSIKAGDDLTDDEAARLVERLGS 529
Query: 791 LNSPWNCPHGRPTMRHLVDLTTIR 814
+P+ CPHGRPT+ + + T +R
Sbjct: 530 CETPYTCPHGRPTVLAIDEETFVR 553
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 42/65 (64%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR ++ G +I AG+V+ +S ELVEN+LDAGA ++EI + G + +V D+G G
Sbjct: 2 IRRLDPGTRSKIAAGEVVARPASVAVELVENALDAGAETVEIEVDGDGTDRIRVADDGRG 61
Query: 72 ISPNN 76
++ ++
Sbjct: 62 MAESD 66
>gi|302840654|ref|XP_002951882.1| hypothetical protein VOLCADRAFT_61805 [Volvox carteri f.
nagariensis]
gi|300262783|gb|EFJ46987.1| hypothetical protein VOLCADRAFT_61805 [Volvox carteri f.
nagariensis]
Length = 369
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 58/75 (77%)
Query: 4 ETPTNSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWF 63
+T + I+PIN+ +HRIC+GQVI DL++A+KELVEN+LDAGAT+IE+ L+EYG
Sbjct: 6 QTASAGGNIKPINRQSIHRICSGQVILDLATAIKELVENALDAGATNIEVRLREYGSAMV 65
Query: 64 QVVDNGCGISPNNFK 78
+V DNG G+ P +++
Sbjct: 66 EVADNGRGVPPADYQ 80
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 94/174 (54%), Gaps = 21/174 (12%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGS-----SSLKDNIITVFG----M 130
RAV + QAYALIA R + TN GK + T + ++L+DN++ VFG
Sbjct: 182 RAVAVLQAYALIATHARLIVTNQAGKATARTTVFTTTAPAAELAALRDNVVAVFGGKQLH 241
Query: 131 NIYNCLEP---VAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVN 187
++ L P + + V ++S+ G G R RQ+FF+N RPVDLPK ++++N
Sbjct: 242 SVVVRLSPRLSIFVLILYPSPVRSWVSRAGCGL-RGDASRQFFFLNGRPVDLPKAARILN 300
Query: 188 ELYKGANSRQY-----PIAIMNFIVPTRACDVNVTPDKRKVFFSDE---CSILH 233
+ +K +S + P+A++ + DVNVTPDKR+VF + E CS+L
Sbjct: 301 DSFKSLSSPAHAAACRPMAVVAVNLAASDVDVNVTPDKRRVFMAAEDRLCSLLQ 354
>gi|197127288|gb|ACH43786.1| putative postmeiotic segregation increased 2-like 6 [Taeniopygia
guttata]
Length = 267
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 58/80 (72%), Gaps = 2/80 (2%)
Query: 1 MDVETPTNSPT--IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEY 58
M+ P P IRPI++G VHRIC+GQV+ L +AVKELVENSLDAGAT+I+I LK++
Sbjct: 1 MEAAAPCPQPAGAIRPIDRGSVHRICSGQVVLSLGTAVKELVENSLDAGATNIDIKLKDH 60
Query: 59 GEEWFQVVDNGCGISPNNFK 78
G E +V DNG G+ NF+
Sbjct: 61 GAELIEVSDNGVGVEEENFE 80
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 36/59 (61%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP 138
+ V L QAY +++KGVR CTN G+ K+ V+ T GS SLK+NI VFG L P
Sbjct: 182 KMVQLLQAYCIVSKGVRINCTNQVGQGKKTCVISTAGSPSLKENIGAVFGQKQLQSLIP 240
>gi|350538475|ref|NP_001232335.1| putative postmeiotic segregation increased 2-like 6 [Taeniopygia
guttata]
gi|197127289|gb|ACH43787.1| putative postmeiotic segregation increased 2-like 6 [Taeniopygia
guttata]
Length = 267
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 58/80 (72%), Gaps = 2/80 (2%)
Query: 1 MDVETPTNSPT--IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEY 58
M+ P P IRPI++G VHRIC+GQV+ L +AVKELVENSLDAGAT+I+I LK++
Sbjct: 1 MEAAAPCPQPAGAIRPIDRGSVHRICSGQVVLSLGTAVKELVENSLDAGATNIDIKLKDH 60
Query: 59 GEEWFQVVDNGCGISPNNFK 78
G E +V DNG G+ NF+
Sbjct: 61 GAELIEVSDNGVGVEEENFE 80
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP- 138
+ V L QAY +++KGVR CTN G+ K+ V+ GS SLK I VFG N L P
Sbjct: 182 KMVQLLQAYCIVSKGVRINCTNQVGQGKKTCVISPAGSPSLKGTIGAVFGQNQLQSLIPF 241
Query: 139 VAICKSDS-CKVEGF 152
V + S++ C+ GF
Sbjct: 242 VQLPPSEAVCEEYGF 256
>gi|433432037|ref|ZP_20407732.1| DNA mismatch repair protein MutL [Haloferax sp. BAB2207]
gi|432193692|gb|ELK50392.1| DNA mismatch repair protein MutL [Haloferax sp. BAB2207]
Length = 563
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 101/204 (49%), Gaps = 20/204 (9%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQ---STVLNQQPLLRPLKL 670
F ++VIG+F +++ + D +L +VDQHAA E+ N+ERL + S ++ + P +
Sbjct: 367 FDDLRVIGRFRGLYLLCEADDELLVVDQHAAHERINYERLREAVESAGIDSAAVDPPATV 426
Query: 671 DLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIST 730
L+P + + + D++ K GF + E +R++AVP F + + D+++
Sbjct: 427 SLSPGDAALLDANRDLVEKLGFRVVEFGEGDGTGTYRVEAVPAPLGRPFAPDALADVVAD 486
Query: 731 LADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLAD 790
+A S D D +L AC SI GD L +E +++E L
Sbjct: 487 VA---------SGDDADPRDE--------LLKDLACHPSIKAGDDLTDDEAARLVERLGS 529
Query: 791 LNSPWNCPHGRPTMRHLVDLTTIR 814
+P+ CPHGRPT+ + + T +R
Sbjct: 530 CGTPYTCPHGRPTVLSIDEETFVR 553
Score = 45.8 bits (107), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 22 RICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGIS 73
+I AG+V+ +S V EL+EN+LDAGA ++E + G + +V D+G G++
Sbjct: 12 KIAAGEVVARPASVVVELIENALDAGAETVETDVDGDGTDRIRVADDGRGMA 63
>gi|419718743|ref|ZP_14246049.1| DNA mismatch repair protein, C-terminal domain / MutL C-terminal
dimerization domain multi-domain protein
[Lachnoanaerobaculum saburreum F0468]
gi|383305083|gb|EIC96462.1| DNA mismatch repair protein, C-terminal domain / MutL C-terminal
dimerization domain multi-domain protein
[Lachnoanaerobaculum saburreum F0468]
Length = 652
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 105/201 (52%), Gaps = 23/201 (11%)
Query: 608 LFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQ---QPL 664
F E MKV+GQ + I +L+++L+I+DQHAA EK +ERL + + N+ Q +
Sbjct: 455 FFDSESKKYMKVVGQVFDTYWIVQLEKELYIIDQHAAHEKVMYERLLKESKENRPSSQMI 514
Query: 665 LRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDV 724
P+ + LT E+ V HMD RK GF +EE G +++ ++P I +
Sbjct: 515 NPPVIVTLTDVEQNVLKDHMDEFRKIGFDIEE----FGGKEYKINSIP---NIFPSIPKA 567
Query: 725 KDLISTLADNQGECSIISSYKMDTADSVCPSR-VRAMLASRACRSSIMIGDALGRNEMQK 783
+ L+D+ ++Y D + PS + A +AS AC+++I + E +
Sbjct: 568 ELFNEMLSDS-------TNY-----DIISPSELILAKVASMACKAAIKGNMRISLLEANE 615
Query: 784 ILEHLADLNSPWNCPHGRPTM 804
+ + L L +P+NCPHGRPT+
Sbjct: 616 LFDELLSLENPYNCPHGRPTV 636
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 56/93 (60%), Gaps = 2/93 (2%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I ++K V +I AG+V++ +S VKE++ENS+DAG++ I + +K G + ++ DNGCG
Sbjct: 2 INILDKNTVDKIAAGEVVERPASIVKEILENSIDAGSSLITVEIKNGGTDLIRITDNGCG 61
Query: 72 ISPNNFKVRAVFLCQAYALIAKGVRFVCTNTTG 104
I+ + +V+ FL A + I + + G
Sbjct: 62 IAAS--EVKKAFLRHATSKIISDKDLISIKSLG 92
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 70/144 (48%), Gaps = 14/144 (9%)
Query: 110 VVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPG-QGSGRNLGDRQ 168
+ L+T GS +LKD + ++G I L V K D K+ G +++P S RNL +
Sbjct: 193 IKLQTNGSGNLKDIVYQLYGKEISKALCNVD-YKKDGIKISGVVARPEVTRSSRNL---E 248
Query: 169 YFFVNDRPVDLPKVSKLVNELYKGANSR----QYPIAIMNFIVPTRACDVNVTPDKRKVF 224
FVN R V +SK + + G R QYP + F DVNV P K +V
Sbjct: 249 NIFVNGRYVKDNIISKAIED---GFGDRLMQHQYPFCALKF--ELDGVDVNVHPRKMEVR 303
Query: 225 FSDECSILHALREGLQEIYSPNNA 248
FSD + +E ++EI++ +A
Sbjct: 304 FSDRNFVYDNTKEAVEEIFTAQSA 327
>gi|410726893|ref|ZP_11365124.1| DNA mismatch repair protein MutL [Clostridium sp. Maddingley
MBC34-26]
gi|410599868|gb|EKQ54407.1| DNA mismatch repair protein MutL [Clostridium sp. Maddingley
MBC34-26]
Length = 657
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 106/207 (51%), Gaps = 25/207 (12%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFER----LSQSTVLNQQPLLRPLK 669
F + +IGQ+N +I+G+ + L+++DQHAA EK FE+ + T++ QPL+ P
Sbjct: 466 FPPITIIGQYNKTYILGEHEGTLYMIDQHAAHEKIIFEKYLKEIENGTII-IQPLMVPSI 524
Query: 670 LDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIS 729
+DL+ ++ + ++ ++ GF LEE G LK VP+ G + K L
Sbjct: 525 IDLSIDDYSYFEENKEVFKEAGFLLEE----FGGNSLSLKEVPY----FLGKLNPKSLFL 576
Query: 730 TLADNQGECSIISSYKMDTADSVCPSRVRA-MLASRACRSSIMIGDALGRNEMQKILEHL 788
+ DN + + S V+ +AS+AC+++I D L NEM K++E L
Sbjct: 577 DILDN-----------LKNLGNGKTSEVKHNAIASKACKAAIKGNDKLEINEMVKLIEDL 625
Query: 789 ADLNSPWNCPHGRPTMRHLVDLTTIRK 815
++ P++CPHGRP + + +K
Sbjct: 626 RFIDDPFHCPHGRPVIVKFTSMDIDKK 652
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 54/93 (58%), Gaps = 2/93 (2%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I +N+ ++I AG+V++ +S VKELVENS+DA + +I I ++E G +++D+G G
Sbjct: 4 INILNEDTANKIAAGEVVERPASVVKELVENSIDANSKNITIEIEEGGISLIRIIDDGDG 63
Query: 72 ISPNNFKVRAVFLCQAYALIAKGVRFVCTNTTG 104
I ++ + FL A + I + +T G
Sbjct: 64 IYKDD--IAKAFLPHATSKIKESEDIYNIHTLG 94
Score = 44.7 bits (104), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 64/128 (50%), Gaps = 8/128 (6%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLS--KPGQGSGRNLGDRQ 168
+L T G+ LKD I T++G +I + + + SD V G++ + +GS N Q
Sbjct: 196 ILHTFGNGDLKDVIRTIYGKSITDNILYFSET-SDLITVYGYIGTEEIARGSRNN----Q 250
Query: 169 YFFVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSD 227
FVN R + ++ V + +K ++ ++P I+ V DVN+ P K +V F+D
Sbjct: 251 SIFVNKRYIKNRALAIAVEQAFKSFSTVNKFPFFILFIEVYPEHVDVNIHPTKAEVKFND 310
Query: 228 ECSILHAL 235
E +I +
Sbjct: 311 ERTIFKKI 318
>gi|374629541|ref|ZP_09701926.1| DNA mismatch repair protein MutL [Methanoplanus limicola DSM 2279]
gi|373907654|gb|EHQ35758.1| DNA mismatch repair protein MutL [Methanoplanus limicola DSM 2279]
Length = 705
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 99/197 (50%), Gaps = 24/197 (12%)
Query: 614 FGRMKVIGQFNLGFII----GKLDQDLFIVDQHAADEKYNFERLSQSTV--LNQQPLLRP 667
F MK+ GQFN +I+ G ++L ++DQHAA E+ ++++ + + N Q LL P
Sbjct: 512 FPDMKIAGQFNSSYIVAFMSGSEGEELVLIDQHAAHERIIYDQIQANKMSGKNSQELLVP 571
Query: 668 LKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDL 727
+ L+L E ++ + + + GF +EE F +++VP G E +KD+
Sbjct: 572 VILNLRASESMILISGLKELEEEGFKIEE----FGRDSFAIRSVPLVLGKRIGTEIIKDI 627
Query: 728 ISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEH 787
IS + MD S R + ++ +C+++I G L +M+K+++
Sbjct: 628 ISDI--------------MDDGTSTFEERKEKIASTVSCKAAIKAGTELSFEQMKKLVKQ 673
Query: 788 LADLNSPWNCPHGRPTM 804
L+ +P+ CPHGRP +
Sbjct: 674 LSATENPYTCPHGRPAI 690
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 70/144 (48%), Gaps = 13/144 (9%)
Query: 117 SSSLKDNIITVFGMNIYNCLEPVAICKS-DSCKVEGFLSKPGQGSGRNLGDRQYFFVNDR 175
S K+ I ++G N L + I K+ KV+GF +KP S + VN+R
Sbjct: 211 SGDFKEKIGHIYGSESVNDL--IEIKKTFPFMKVDGFCAKPSVNSSTQ--QSVHISVNNR 266
Query: 176 PVDLPKVSKLVNELYKGANSR-QYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHA 234
P+ +S+ + E Y + +YP+A +N I+ DVNV P KR+V FS E I A
Sbjct: 267 PISSVPLSRAIKEGYGTLLPKNRYPVAYLNLIIDRNIVDVNVHPTKREVRFSRETEIRSA 326
Query: 235 LREGLQE-------IYSPNNASYS 251
LRE + E IY N + +S
Sbjct: 327 LRESVSEALKGESLIYKKNPSVFS 350
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 43/63 (68%), Gaps = 2/63 (3%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWF--QVVDNG 69
I ++ +++I AG+V++ +S VKELVENS+D+GA +I+I + E F +V D+G
Sbjct: 9 IHLLDDDTINKIAAGEVVERPASVVKELVENSIDSGAKNIKIDIGSDSHEIFRIRVSDDG 68
Query: 70 CGI 72
CG+
Sbjct: 69 CGM 71
>gi|331001790|ref|ZP_08325312.1| hypothetical protein HMPREF0491_00174 [Lachnospiraceae oral taxon
107 str. F0167]
gi|330412764|gb|EGG92147.1| hypothetical protein HMPREF0491_00174 [Lachnospiraceae oral taxon
107 str. F0167]
Length = 661
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 105/201 (52%), Gaps = 23/201 (11%)
Query: 608 LFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERL---SQSTVLNQQPL 664
F KE +KV+GQ + I +L+ D++I+DQHAA EK +ERL S+++ + Q +
Sbjct: 464 FFDKESKKYIKVVGQVFDTYWIVQLENDMYIIDQHAAHEKVMYERLLRESKNSKITAQMI 523
Query: 665 LRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDV 724
P+ + LT E+ V + H+D + GF +EE G +++ ++P I +
Sbjct: 524 NPPIIVTLTDVEQDVLNKHLDEFKNAGFDIEE----FGGKEYKINSIP---NIFPSIPKA 576
Query: 725 KDLISTLADNQGECSIISSYKMDTADSVCPSRV-RAMLASRACRSSIMIGDALGRNEMQK 783
+ L+D+ ++Y D + PS + A AS AC+++I + E +
Sbjct: 577 ELFNEMLSDS-------TNY-----DIISPSEIILAKTASMACKAAIKGNMRISLMEANE 624
Query: 784 ILEHLADLNSPWNCPHGRPTM 804
+ + L L +P+NCPHGRPT+
Sbjct: 625 LFDELLSLKNPYNCPHGRPTI 645
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 56/93 (60%), Gaps = 2/93 (2%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I ++KG + +I AG+V++ +S VKEL+ENS+DAG++SI + +K G + ++ DNGCG
Sbjct: 2 INILDKGTIDKIAAGEVVERPASIVKELLENSIDAGSSSITVEIKNGGIDLIRITDNGCG 61
Query: 72 ISPNNFKVRAVFLCQAYALIAKGVRFVCTNTTG 104
I +V+ FL A + I + + G
Sbjct: 62 IDAK--EVKKAFLRHATSKIISDKDLISIKSLG 92
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 83/172 (48%), Gaps = 23/172 (13%)
Query: 84 LCQAYALIAKGV--RFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAI 141
L + A+ G+ +F+ N + L+T G+ +LKD I ++G I L V
Sbjct: 172 LVEKMAMSNTGIAFKFISNN-------QIKLQTNGNGNLKDIIYQLYGKEISKAL-CVID 223
Query: 142 CKSDSCKVEGFLSKPG-QGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSR---- 196
+ D K+ G +++P S RNL + FVN R + +SK + + G R
Sbjct: 224 YEKDGIKIGGVIARPEVTRSTRNL---ENIFVNGRYIKDNIISKAIED---GFGDRLMQH 277
Query: 197 QYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNA 248
QYP ++F + DVNV P K +V FSD + +A +E +++I+ +A
Sbjct: 278 QYPFCALSFDI--EGVDVNVHPRKMEVRFSDRNIVYNAAKEAVEDIFKTQSA 327
>gi|218283240|ref|ZP_03489301.1| hypothetical protein EUBIFOR_01889 [Eubacterium biforme DSM 3989]
gi|218215995|gb|EEC89533.1| hypothetical protein EUBIFOR_01889 [Eubacterium biforme DSM 3989]
Length = 608
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 101/197 (51%), Gaps = 23/197 (11%)
Query: 612 EDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVL---NQQPLLRPL 668
E F ++V+ Q + +I+ ++ L IVDQHAA E+Y++E+L++ ++ N+QPL+ P+
Sbjct: 416 EFFKHLQVLAQLHDSYILCSNEEGLVIVDQHAAQERYHYEQLNEKLLVQCTNKQPLMVPI 475
Query: 669 KLDLTPEEEVVASMHMDIIRKNGF-SLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDL 727
+LD++ V + +M I K F +E +P L R +P + F D K
Sbjct: 476 QLDVSSN---VLAQYMTINEKTAFFGIEFEPFGTDQLILR--EIP----LWFHDVDQKQF 526
Query: 728 ISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEH 787
+ L D Y ++ D + M+A+ AC SSI L EM++++
Sbjct: 527 LQDLLD----------YFVENQDVDMAKLRKHMIATMACHSSIRFNRPLSMQEMEQVILD 576
Query: 788 LADLNSPWNCPHGRPTM 804
L P++CPHGRPT+
Sbjct: 577 LQKCKQPYHCPHGRPTV 593
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 40/61 (65%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I +++ + + I AG+V++ + VKE VENS+DAGAT IE+ + G E + D+GCG
Sbjct: 4 IHVLSEHLTNMIAAGEVVERPAGIVKECVENSIDAGATVIEVEAFQGGIERIVITDDGCG 63
Query: 72 I 72
+
Sbjct: 64 M 64
>gi|156406466|ref|XP_001641066.1| predicted protein [Nematostella vectensis]
gi|156228203|gb|EDO49003.1| predicted protein [Nematostella vectensis]
Length = 346
Score = 93.2 bits (230), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 95/172 (55%), Gaps = 14/172 (8%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICK 143
L A+ LI VR T ++ KS++ + LK + + G N + +E + I K
Sbjct: 178 LIMAFGLIHPSVRL-----TLRHNKSIIWQKNKCEDLKKALTGIIGANAMSSMEEI-IVK 231
Query: 144 SD--SCKVEGFLSKPGQG---SGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGAN---S 195
D ++EGF+ KPG + R++GDR + +VN RPV L +++++V E Y + S
Sbjct: 232 DDQTGLRIEGFVPKPGSDPNVTSRSMGDRSFVYVNKRPVVLKEIAQVVREFYLKIHPTIS 291
Query: 196 RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNN 247
++P+A ++ VP A DVN+ P+K +V +++ I+ LR L+E+Y +N
Sbjct: 292 NRHPVAFLSIEVPPCAVDVNLEPNKSRVLLTEKDIIIDLLRNSLEELYVDHN 343
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/69 (55%), Positives = 49/69 (71%), Gaps = 4/69 (5%)
Query: 20 VHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFKV 79
VHRI + QVI +SSAVKEL+EN+LDAGA SIE+ L+EYG E +V DNG GI ++
Sbjct: 12 VHRIASSQVITSVSSAVKELLENALDAGANSIEVKLEEYGLEKIEVRDNGTGIPQDD--- 68
Query: 80 RAVFLCQAY 88
A F+ Q +
Sbjct: 69 -AQFMAQRH 76
>gi|260438406|ref|ZP_05792222.1| DNA mismatch repair protein HexB [Butyrivibrio crossotus DSM 2876]
gi|292808992|gb|EFF68197.1| DNA mismatch repair protein HexB [Butyrivibrio crossotus DSM 2876]
Length = 627
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 103/200 (51%), Gaps = 21/200 (10%)
Query: 608 LFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQST---VLNQQPL 664
L +KE+ +K+IGQ + I + + ++IVDQHAA EK FER + + Q +
Sbjct: 430 LLKKENKKDIKIIGQLFDTYWIMEFENSMYIVDQHAAHEKVLFERFMKRYNDRSITSQMI 489
Query: 665 LRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDV 724
P+ LT EE+ V + + + + G+ +E+ G ++ +P F D
Sbjct: 490 NPPVVFSLTTEEQNVYKDNEEYLAQFGYEIED----FGGGELAIRGIPAD----FSEADP 541
Query: 725 KDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKI 784
K++ + + D S+ Y +T P ++ +A+ +C++++ + L EM+K+
Sbjct: 542 KEIFTEIMD-----SLCIDYGKNT-----PETIKNRIATMSCKAAVKGNNRLNIKEMEKL 591
Query: 785 LEHLADLNSPWNCPHGRPTM 804
++ L +L +P+NCPHGRPT
Sbjct: 592 MDELMELENPYNCPHGRPTF 611
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 56/93 (60%), Gaps = 2/93 (2%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I ++K +++I AG+V+ SS VKELVEN++DAGAT+I + +K+ G ++ DNGCG
Sbjct: 3 INLLDKNTINKIAAGEVVDRPSSVVKELVENAIDAGATAITVEIKDGGISLIRITDNGCG 62
Query: 72 ISPNNFKVRAVFLCQAYALIAKGVRFVCTNTTG 104
I N +VR FL + + I ++ G
Sbjct: 63 IDKN--EVRLAFLRHSTSKIKSAADLAGISSLG 93
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 78/158 (49%), Gaps = 15/158 (9%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICK 143
LC ++ I+ +RF+ N ++T G+ LKDNI V+G I + L +
Sbjct: 177 LCLSHPEIS--IRFINNNQPK-------IQTTGNGKLKDNIYVVYGREITSNLLEIDRQF 227
Query: 144 SDSCKVEGFLSKPGQGSG-RNLGDRQYFFVNDRPVDLPKVSKLVNELYKG-ANSRQYPIA 201
+D ++G++ KP G RN + +++N R V V++ + + Y G +YP
Sbjct: 228 NDYS-IKGYVGKPLISRGNRNFEN---YYINGRYVKSNIVARAIEDAYAGFIMQHKYPFT 283
Query: 202 IMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGL 239
++ + DVNV P K ++ FS+E I + ++E +
Sbjct: 284 SLHITINPELLDVNVHPSKMELRFSNEQEIYNNVKESI 321
>gi|448593354|ref|ZP_21652352.1| DNA mismatch repair protein MutL [Haloferax elongans ATCC BAA-1513]
gi|445730262|gb|ELZ81852.1| DNA mismatch repair protein MutL [Haloferax elongans ATCC BAA-1513]
Length = 550
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 95/194 (48%), Gaps = 24/194 (12%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTV---LNQQPLLRPLKL 670
F ++VIGQF +++ ++ +L ++DQHAA E+ N+ERL ++ ++ P+ P+ +
Sbjct: 358 FDDVRVIGQFRDLYVLCEVGDELLVIDQHAAHERVNYERLREAVEKAGVDSVPVDPPVSV 417
Query: 671 DLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIST 730
L+P E + + D + + GF + + G +R++AVP F + + D++S
Sbjct: 418 SLSPPEAALLEANRDAVERLGFRVAD----FGGGTYRVEAVPAPLGRPFAPDALADVVSD 473
Query: 731 LADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLAD 790
LA N D D L AC SI GD L + +++ L
Sbjct: 474 LAAND---------PRDPRDE--------FLKDLACHPSIKAGDDLSVADATRLVSRLGS 516
Query: 791 LNSPWNCPHGRPTM 804
+P+ CPHGRPT+
Sbjct: 517 CEAPYTCPHGRPTV 530
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 40/62 (64%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I +++ +I AG+V+ +S V ELVEN+LDAGA ++EI + G + +V D+G G
Sbjct: 2 IHELDRQTRAQIAAGEVVTRPASVVVELVENALDAGAETVEIEISGDGTDRIRVSDDGVG 61
Query: 72 IS 73
+S
Sbjct: 62 MS 63
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 72/166 (43%), Gaps = 17/166 (10%)
Query: 88 YALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNI------YNCLEPVAI 141
YAL+ VRFV + G+ L T G+ D ++ V+G + ++ + I
Sbjct: 174 YALVRPDVRFVLRHD-GRET----LTTPGTDRFTDALLAVYGREVASHASTFDASRELRI 228
Query: 142 -CKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKG--ANSRQY 198
+SD ++G L P R D + VN R + ++ + V++ Y + R+
Sbjct: 229 GTESDEMAIDGVLCHPLVSRARR--DHVHVSVNGRALAESRIRRAVSDAYGTLLPDGRE- 285
Query: 199 PIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYS 244
P+A++ +P D NV P K V F D + A+ + + S
Sbjct: 286 PVAVVRLSLPPSWVDHNVHPAKSDVEFRDTEVVADAVEASVNDALS 331
>gi|339448740|ref|ZP_08652296.1| DNA mismatch repair protein [Lactobacillus fructivorans KCTC 3543]
Length = 260
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 122/261 (46%), Gaps = 25/261 (9%)
Query: 564 SSCHTSGSVKMRRCFAAATLELSQPENEERKARALAAATTELERLFRKEDFGRMKVIGQF 623
SS H + + AA ++ + E K TE DF +++ IGQ
Sbjct: 11 SSTHQPIMIYRKADLNAAAVQNFKARYEHEKGELPFGGKTEAPNA--SHDFPQLRYIGQV 68
Query: 624 NLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVL---NQQPLLRPLKLDLTPEEEVVA 680
+ +++ + ++IVDQHAA E+ N+E + ++Q +L P+ LD + +V
Sbjct: 69 HGTYLVAESSDGMYIVDQHAAQERINYEYYRKQVGRVSGDEQKMLVPIVLDYPASDALVI 128
Query: 681 SMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSI 740
S H+D++ +NG LE + F ++ P + F +D I + D I
Sbjct: 129 SSHLDLLEENGLHLE----SFGKNSFVIRQHP----VWFKAGQEEDTIKEMID-----WI 175
Query: 741 ISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHG 800
+S+ ++ TA R +A + +C+ +I L + + Q +L+ L + +P+NCPHG
Sbjct: 176 LSNQQLSTAQF----REKAAIM-MSCKRAIKANHHLDKRQAQALLDKLPECENPFNCPHG 230
Query: 801 RPTMRHL--VDLTTIRKNIDE 819
RP + H DL T+ K I +
Sbjct: 231 RPVLVHFSNSDLETMFKRIQD 251
>gi|295110016|emb|CBL23969.1| DNA mismatch repair protein MutL [Ruminococcus obeum A2-162]
Length = 674
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 108/202 (53%), Gaps = 21/202 (10%)
Query: 606 ERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQS---TVLNQQ 662
E+L E R++V+GQ + + + + + +I+DQHAA EK +ER+ + ++ Q
Sbjct: 475 EKLLAPESRSRIRVVGQIFDTYWLVQFEDNFYIIDQHAAHEKVYYERMVKQFREHSIDSQ 534
Query: 663 PLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVE 722
L P+ + L+ +EE V + + D + GF +E G +R+ AVP + +G+
Sbjct: 535 YLSPPMIVTLSMQEEEVLNSNKDYFEQFGFEIEN----FGGREYRISAVPSN---LYGLT 587
Query: 723 DVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQ 782
+ +DL + DN +S A + S+ LA+ AC++++ A+ E +
Sbjct: 588 E-EDLFLEMLDN------LSGNNSRDALDIFASK----LATMACKAAVKGNHAMSFEEAE 636
Query: 783 KILEHLADLNSPWNCPHGRPTM 804
K+++ L L++P++CPHGRPT+
Sbjct: 637 KLIDELLTLDNPYHCPHGRPTI 658
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 52/82 (63%), Gaps = 2/82 (2%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I +++ + +I AG+V++ SS VKELVEN++DAGAT++ + + + G++ ++ DNG G
Sbjct: 8 IAVLDQNTIDKIAAGEVVERPSSVVKELVENAIDAGATAVTVEITDGGKKLIRITDNGSG 67
Query: 72 ISPNNFKVRAVFLCQAYALIAK 93
+ ++ FL A + I K
Sbjct: 68 MESE--QIPLAFLRHATSKIEK 87
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 64/131 (48%), Gaps = 8/131 (6%)
Query: 108 KSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDR 167
K V L T G+ S+KD I +V+G I L V S KVEGF+ KP G+R
Sbjct: 197 KQVKLHTSGNYSVKDVIYSVYGREIAKALLDVNYENS-FMKVEGFVGKPEIAR----GNR 251
Query: 168 QY--FFVNDRPVDLPKVSKLVNELYKG-ANSRQYPIAIMNFIVPTRACDVNVTPDKRKVF 224
+ +++N R V ++K + Y+G ++P + + DVNV P KR+V
Sbjct: 252 SFENYYINGRYVKNNIITKAIENAYRGFLMQHKFPFVSLRMEMEGNDLDVNVHPAKREVR 311
Query: 225 FSDECSILHAL 235
F+ E + A+
Sbjct: 312 FAREQEVYDAV 322
>gi|440782000|ref|ZP_20960228.1| DNA mismatch repair protein [Clostridium pasteurianum DSM 525]
gi|440220718|gb|ELP59925.1| DNA mismatch repair protein [Clostridium pasteurianum DSM 525]
Length = 630
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 100/197 (50%), Gaps = 21/197 (10%)
Query: 611 KEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTV---LNQQPLLRP 667
K F ++VIGQ++ +I+ + +D +++DQHAA EK F++ S+ + Q LL P
Sbjct: 436 KPKFPDLRVIGQYHNTYILAESTEDFYLIDQHAAHEKILFQKYSKEIKEGKVTAQILLTP 495
Query: 668 LKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDL 727
++++PE+ + + DI GF++E ++ VP G +K+L
Sbjct: 496 EVIEMSPEDFIQYIENKDIFSNAGFNIE----VFGDNTISIREVPN----FLGKPQLKNL 547
Query: 728 ISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEH 787
S + DN +Y++ +A+ AC+++I D L EM+ ++E
Sbjct: 548 FSDMLDNLKNLGSGETYEVKYNK----------IATIACKAAIKANDYLSLEEMKSLVEQ 597
Query: 788 LADLNSPWNCPHGRPTM 804
L ++ P+NCPHGRPT+
Sbjct: 598 LRYIDEPFNCPHGRPTI 614
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 55/93 (59%), Gaps = 2/93 (2%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I +N+ ++I AG+V++ SSAVKELVENS+DA + I I ++E G++ +V D+G G
Sbjct: 4 INLLNQETSNKIAAGEVLERPSSAVKELVENSIDANSKVITIEIEEGGQKLIRVTDDGDG 63
Query: 72 ISPNNFKVRAVFLCQAYALIAKGVRFVCTNTTG 104
I P + + FL A + I+ NT G
Sbjct: 64 IDPED--IEKAFLPHATSKISSIDDIYAINTLG 94
>gi|292656068|ref|YP_003535965.1| DNA mismatch repair protein MutL [Haloferax volcanii DS2]
gi|448290060|ref|ZP_21481216.1| DNA mismatch repair protein MutL [Haloferax volcanii DS2]
gi|291371246|gb|ADE03473.1| DNA mismatch repair protein mutL [Haloferax volcanii DS2]
gi|445580452|gb|ELY34831.1| DNA mismatch repair protein MutL [Haloferax volcanii DS2]
Length = 563
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 100/204 (49%), Gaps = 20/204 (9%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQ---STVLNQQPLLRPLKL 670
F ++VIG+F +++ + D +L +VDQHAA E+ N+ERL + S ++ + P +
Sbjct: 367 FDDLRVIGRFRGLYLLCEADDELLVVDQHAAHERINYERLREAVESAGIDSAAVDPPATV 426
Query: 671 DLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIST 730
L+P + + + D + K GF + E +R++AVP F + + D+++
Sbjct: 427 SLSPADAALLDANRDPVEKLGFRVVEFGEGGGTGTYRVEAVPAPLGRPFAPDALADVVAD 486
Query: 731 LADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLAD 790
+A S D D +L AC SI GD L +E +++E L
Sbjct: 487 VA---------SGDHADPRDE--------LLKDLACHPSIKAGDDLTDDEATRLVERLGS 529
Query: 791 LNSPWNCPHGRPTMRHLVDLTTIR 814
+P+ CPHGRPT+ + + T +R
Sbjct: 530 CETPYTCPHGRPTVLSIDEETFVR 553
Score = 48.1 bits (113), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 36/52 (69%)
Query: 22 RICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGIS 73
+I AG+V+ +S V EL+EN+LDAGA ++EI + G + +V D+G G++
Sbjct: 12 KIAAGEVVARPASVVVELIENALDAGAETVEIDVDGDGTDRIRVADDGRGMA 63
>gi|153954200|ref|YP_001394965.1| hypothetical protein CKL_1575 [Clostridium kluyveri DSM 555]
gi|219854808|ref|YP_002471930.1| hypothetical protein CKR_1465 [Clostridium kluyveri NBRC 12016]
gi|146347081|gb|EDK33617.1| MutL [Clostridium kluyveri DSM 555]
gi|219568532|dbj|BAH06516.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 609
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 102/193 (52%), Gaps = 25/193 (12%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFER----LSQSTVLNQQPLLRPLKLDL 672
K+IGQFN +II + +L+I+DQHAA EK FE+ + + V++Q L+ + ++L
Sbjct: 421 FKMIGQFNNTYIIAEAASNLYIIDQHAAHEKILFEKYKSNIEKKEVISQ-ILITSVVMEL 479
Query: 673 TPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLA 732
T ++ + D+ +K GF++E ++ VP + G D+K+L + +
Sbjct: 480 TNDDYACYVENKDVFKKAGFNIE----LFGNNTINVREVP----VILGKPDIKNLFTDII 531
Query: 733 DNQGECSIISSYKMDTADSVCPSRVRAM-LASRACRSSIMIGDALGRNEMQKILEHLADL 791
DN M + D+V V+ + +A+ ACR++I L + EM+ +L L L
Sbjct: 532 DNLK--------NMGSGDTV---EVKYLSIATLACRAAIKAKHNLSQVEMEHLLHELGFL 580
Query: 792 NSPWNCPHGRPTM 804
P+ CPHGRPT+
Sbjct: 581 EDPFTCPHGRPTI 593
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 50/72 (69%), Gaps = 2/72 (2%)
Query: 21 HRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFKVR 80
++I AG+V++ SS VKEL+ENS+D+GA +I I +++ G++ +V+D+G GI P + V
Sbjct: 13 NKIAAGEVVEGPSSVVKELLENSIDSGAKNITIEIEDGGQKSIRVIDDGVGIHPED--VE 70
Query: 81 AVFLCQAYALIA 92
F+ A + I+
Sbjct: 71 KAFMPHATSKIS 82
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 66/143 (46%), Gaps = 16/143 (11%)
Query: 112 LKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFL--SKPGQGSGRNLGDRQY 169
L T GS + D I ++G NIY + P+ SD + G++ S+ +GS N Q
Sbjct: 198 LVTYGSGEVMDVIRCIYGKNIYENIIPIE-NHSDIASIYGYIGNSEVSRGSRNN----QS 252
Query: 170 FFVNDRPVDLPKVSKLVNELYKG-ANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDE 228
FVN R V ++ V + +K ++P ++ + D+NV P K ++ FSD
Sbjct: 253 IFVNRRYVKDKSITAAVEKAFKSFLTVNKFPFFVLFLDLFPEFVDINVHPAKWEIKFSDS 312
Query: 229 CSIL--------HALREGLQEIY 243
I ALRE L++ +
Sbjct: 313 RMIFKFVFDTIHQALRESLKDSF 335
>gi|345004245|ref|YP_004807098.1| DNA mismatch repair protein mutL [halophilic archaeon DL31]
gi|344319871|gb|AEN04725.1| DNA mismatch repair protein mutL [halophilic archaeon DL31]
Length = 760
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 102/216 (47%), Gaps = 21/216 (9%)
Query: 596 RALAAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQ 655
RAL+ T E + + M+V+GQ + +++ + D L ++DQHAADE+ N+ERL +
Sbjct: 544 RALSGGTAETGGEY--DSLPAMRVLGQLDDTYVVAETDGGLVLIDQHAADERVNYERLQR 601
Query: 656 STV--LNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPF 713
+ Q L P+ L+LT E + + H+D + + GF+ E+ + G + AVP
Sbjct: 602 GFADGMTSQALAAPVALELTAREAELFTSHIDALSELGFAAEQ----VDGRAVEVTAVPA 657
Query: 714 SKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIG 773
E ++D++ ++ D AD +LA AC S+
Sbjct: 658 VFDTALDPELLQDVLGAFVAGDAAEAL-----EDVADE--------LLADLACYPSVTGN 704
Query: 774 DALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVD 809
+L + +L L D +P+ CPHGRP + + D
Sbjct: 705 TSLTEGSVSALLAALDDCANPYACPHGRPVIIEISD 740
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 47/69 (68%)
Query: 5 TPTNSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQ 64
T + P IR +++ V RI AG+V++ +S VKELVEN++DA A+ + +A + G++ +
Sbjct: 10 TEADGPRIRSLDEATVQRIAAGEVVERPASVVKELVENAIDADASRVSVAAERGGKDGIR 69
Query: 65 VVDNGCGIS 73
V D+G G++
Sbjct: 70 VRDDGVGMT 78
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 79/183 (43%), Gaps = 31/183 (16%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPV-----AICKSDSCKVEG-------FLSKPGQ 158
+ T+G+ L +++V+G + + V +D+ +V+G +S P
Sbjct: 210 LFATEGNGDLTSTVLSVYGRAVAEAMVEVEWQAEGAVSADAGEVDGPVVTVSGLVSHPET 269
Query: 159 GSGRNLGDRQYF--FVNDRPVDLPKVSKLVNELYKGA-NSRQYPIAIMNFIVPTRACDVN 215
R+Y FVNDR V + + V + Y G S +YP A++ V + DVN
Sbjct: 270 ----TRAGREYLSTFVNDRYVTATALREAVLDAYGGQLASDRYPFAVLFVEVDPKTVDVN 325
Query: 216 VTPDKRKVFFSDECSILHA---------LREGLQEIYSPNNASYSVNKVEQLIEPEKSGP 266
V P K +V F DE + A L GL +P S + E +EPE++G
Sbjct: 326 VHPRKMEVRFDDEGGVKDAVEGAVTEALLDHGLVRRSAPRGRSQA---DETHVEPERNGG 382
Query: 267 SSG 269
SG
Sbjct: 383 ESG 385
>gi|355570879|ref|ZP_09042149.1| DNA mismatch repair protein mutL [Methanolinea tarda NOBI-1]
gi|354826161|gb|EHF10377.1| DNA mismatch repair protein mutL [Methanolinea tarda NOBI-1]
Length = 600
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 101/195 (51%), Gaps = 28/195 (14%)
Query: 617 MKVIGQFNLGFIIGKL--DQDLFIVDQHAADEKYNFERLSQSTVLNQQP--LLRPLKLDL 672
M V+GQ + +I+ +DL +VDQHAA E+ F++L+ + Q LL P+ LDL
Sbjct: 412 MDVLGQLDDTYILASFRGGEDLILVDQHAAHERILFDQLTAGDAIQSQSQELLVPVILDL 471
Query: 673 TPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVP--FSKKITFGVEDVKDLIST 730
+P E+ + + ++ + GF++EE G + ++A+P +++ G V++L+S
Sbjct: 472 SPREQSILPDIVPVLCEAGFTIEE----FGGGSYAVRAIPVVLGRQVDPGA--VRELLSA 525
Query: 731 -LADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLA 789
LA N+ PSR A+ ACR +I G L R + + +L L
Sbjct: 526 ILAGNEKHG---------------PSRADAIRKVVACRGAIKAGTPLSREQCRTLLNELR 570
Query: 790 DLNSPWNCPHGRPTM 804
+ P++CPHGRPTM
Sbjct: 571 QTSHPFSCPHGRPTM 585
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEE--WFQVVDNG 69
IR ++K + RI AG+VI+ +S VKELVEN++DAGA IE+ + G + +V D+G
Sbjct: 10 IRLLDKETISRISAGEVIERPASVVKELVENAIDAGARRIEVEITSKGGKIAGIRVTDDG 69
Query: 70 CGISPNNFKVRAV 82
CG++P + ++ V
Sbjct: 70 CGMTPRDAELACV 82
Score = 45.8 bits (107), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 57/113 (50%), Gaps = 4/113 (3%)
Query: 117 SSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRP 176
+++D ++ +FG + L PV S +VEG +S+P R + + VN RP
Sbjct: 210 GGTVRDAVLHLFGTDCEKSLIPVHF-SGRSVRVEGVVSRPA--FFRQNPYQIFVSVNGRP 266
Query: 177 VDLPKVSKLVNELYKGA-NSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDE 228
V ++ V E Y + ++P+A+++ ++ DVNV P KR+V + E
Sbjct: 267 VQSRPLALAVREGYGTLLPADRFPMAVLDIMLDPELVDVNVHPTKREVRIARE 319
>gi|255657967|ref|ZP_05403376.1| DNA mismatch repair protein MutL [Mitsuokella multacida DSM 20544]
gi|260850168|gb|EEX70175.1| DNA mismatch repair protein MutL [Mitsuokella multacida DSM 20544]
Length = 655
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 101/193 (52%), Gaps = 23/193 (11%)
Query: 615 GRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQST--VLNQQPLLRPLKLDL 672
G + IGQ +L +II + + L+IVDQHAA E+ F++ S + +QQ L+ + L
Sbjct: 464 GTVVPIGQVDLTYIIAQDAKGLYIVDQHAAHERILFDKFSAMAGDIPSQQLLVHQI-LTF 522
Query: 673 TPEEEVVASMHMDIIRKNGFSLEEDPHALAGLR-FRLKAVPFSKKITFGVEDVKDLISTL 731
+E + H ++ GF +E ++G R FRL VP ++ + ++++++ L
Sbjct: 523 DRKESELVEAHQELFASLGFHME-----MSGEREFRLIEVPADVPVSEAEDIIREILTNL 577
Query: 732 ADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADL 791
MD ++ +A LA+ ACR++I G+ L +MQ IL+ LA
Sbjct: 578 --------------MDMHETTAKEIRQACLATTACRAAIKAGEELSFRQMQIILDALAHT 623
Query: 792 NSPWNCPHGRPTM 804
+ P+ CPHGRPT+
Sbjct: 624 DFPYTCPHGRPTI 636
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 80/161 (49%), Gaps = 11/161 (6%)
Query: 106 NVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQ-GSGRNL 164
N SVV T G+ +L D I ++G + L + + D K+ G+++KP S R
Sbjct: 192 NKMSVV--TPGTGNLYDTIQAIYGDKTADSLLGLTLEDED-IKISGYITKPSMLKSSRAW 248
Query: 165 GDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQ-YPIAIMNFIVPTRACDVNVTPDKRKV 223
Q + VN R + ++K ++ YK + +P+A++ VP R DVNV P K ++
Sbjct: 249 ---QTYIVNSRIIQNRAIAKAIDNAYKSLIPKSGFPLAVLCIEVPQRTIDVNVHPQKSEL 305
Query: 224 FFSDECSILHALREGLQEIYSPNNASYSVNKVEQLIE-PEK 263
F DE I A+ + + + P A + +V ++E PE+
Sbjct: 306 KFEDESRIFKAVYKAVLDAIRP--AGRGLGEVAAVVEKPEQ 344
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 45/66 (68%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
TI ++ +++I AG+V++ +S +KEL+EN++DAGAT IE+ + G + +V DNG
Sbjct: 2 TIHVLDDNTINKIAAGEVVERPASVIKELIENAMDAGATRIEVEIMAGGTSFMRVTDNGR 61
Query: 71 GISPNN 76
G+S +
Sbjct: 62 GMSAED 67
>gi|58737039|dbj|BAD89428.1| postmeiotic segregation increased 2 nirs variant 4 [Homo sapiens]
Length = 183
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 55/67 (82%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+PI++ VH+IC+GQV+ LS+AVKELVENSLDAGAT+I++ LK+YG + +V DNGCG
Sbjct: 15 IKPIDRKSVHQICSGQVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSDNGCG 74
Query: 72 ISPNNFK 78
+ NF+
Sbjct: 75 VEEENFE 81
>gi|448607731|ref|ZP_21659684.1| DNA mismatch repair protein MutL [Haloferax sulfurifontis ATCC
BAA-897]
gi|445737668|gb|ELZ89200.1| DNA mismatch repair protein MutL [Haloferax sulfurifontis ATCC
BAA-897]
Length = 565
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 104/207 (50%), Gaps = 24/207 (11%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQ---STVLNQQPLLRPLKL 670
F ++VIG+F +++ + +L +VDQHAA E+ N+ERL + S + + P +
Sbjct: 367 FDDLRVIGRFRGLYLLCEAGDELLVVDQHAAHERINYERLREAVESAGVESVAVDPPATV 426
Query: 671 DLTPEEEVVASMHMDIIRKNGFSLEE--DPHALAGLRFRLKAVPFSKKITFGVEDVKDLI 728
L+P + + + D++ K GF + E D + +R++AVP F + + D++
Sbjct: 427 SLSPTDAALLDANRDLVEKLGFRVAEFGDGSRIGTGTYRVEAVPAPLGRPFAPDALADVV 486
Query: 729 STLADNQGECSIISSYKMDTADSVCPSRVRA-MLASRACRSSIMIGDALGRNEMQKILEH 787
+ +A + D P RA +L+ AC SI GD L +E +++E
Sbjct: 487 ADVA---------------SGDDTDP---RAELLSDLACHPSIKAGDDLTDDEAARVVER 528
Query: 788 LADLNSPWNCPHGRPTMRHLVDLTTIR 814
L +P+ CPHGRPT+ + + T +R
Sbjct: 529 LGSCETPYTCPHGRPTVLSIDEKTFVR 555
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 42/65 (64%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR ++ +I AG+V+ +S V ELVEN+LDAGA ++EI + G + +V D+G G
Sbjct: 2 IRRLDPETRSKIAAGEVVARPASVVVELVENALDAGAETVEIEVDGDGTDQIRVADDGRG 61
Query: 72 ISPNN 76
++ ++
Sbjct: 62 MAESD 66
>gi|336477854|ref|YP_004616995.1| DNA mismatch repair protein MutL [Methanosalsum zhilinae DSM 4017]
gi|335931235|gb|AEH61776.1| DNA mismatch repair protein MutL [Methanosalsum zhilinae DSM 4017]
Length = 588
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 101/191 (52%), Gaps = 23/191 (12%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEE 676
++V+GQ + +IIGK++ L I+DQHAA E+ +E+L ++ Q L+ P+ LDL+P+E
Sbjct: 403 IEVMGQVDEIYIIGKMEDQLVIIDQHAAHERILYEQLKVKPNISSQELIAPVTLDLSPKE 462
Query: 677 EVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVED---VKDLISTLAD 733
+ ++ + GF + E + + AVP ++ +ED + D+IS
Sbjct: 463 RALVEEYIPYLESAGFEIFE----FGPSTYAVNAVP---GVSDALEDPAVIPDIIS---- 511
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNS 793
I+S+ ++ + + M ACR +I G A +M +++ L +++
Sbjct: 512 -----DILSAGRIQDETGISEHIRKTM----ACRGAIKAGAACSMEQMVSLVQQLRKVSN 562
Query: 794 PWNCPHGRPTM 804
P++CPHGRPT+
Sbjct: 563 PYSCPHGRPTI 573
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 67/145 (46%), Gaps = 9/145 (6%)
Query: 89 ALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCK 148
AL G+ F KN +LK + S D II +FG +I L P+ KS+ K
Sbjct: 183 ALANPGISFFL-----KNEGKTILKAPKAKSGMDTIIHLFGGDIAKSLIPIE-AKSNGMK 236
Query: 149 VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVN-ELYKGANSRQYPIAIMNFIV 207
+ G++S+P G N D Q+ F+N R V +S + Y +YP+A +
Sbjct: 237 LSGYISRPELTKGNN--DHQFIFINGRCVSSASISNAIRLGYYTKIPKGRYPVAFIKLDA 294
Query: 208 PTRACDVNVTPDKRKVFFSDECSIL 232
+ D NV P K KV S+E ++
Sbjct: 295 DPKNIDFNVHPTKSKVRLSNENEVI 319
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 43/62 (69%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I +++ V++I AG+VI+ +S VKEL++N++DAG++ I + ++ G V DNGCG
Sbjct: 8 IHILDEATVNKIAAGEVIERPASVVKELIDNAIDAGSSQISVEVEGAGAGKIMVSDNGCG 67
Query: 72 IS 73
+S
Sbjct: 68 MS 69
>gi|409043019|gb|EKM52502.1| hypothetical protein PHACADRAFT_100748 [Phanerochaete carnosa
HHB-10118-sp]
Length = 378
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 92/190 (48%), Gaps = 33/190 (17%)
Query: 80 RAVFLCQAYALIA-----KGVRFVCTNTTGKNV---------KSVVLKTQGSSSLKDNII 125
+A+ L AYAL+ GVR V +N V +SV L+T G +SL +I
Sbjct: 184 KALNLLNAYALVPCSHENGGVRLVVSNQLNGQVHVHGSAHSRRSVQLRTDGCTSLSASIS 243
Query: 126 TVFG-MNIYNCLE-----PVAICKS-------------DSCKVEGFLSKPGQGSGRNLGD 166
T++G + N +E V KS + V G +SK GR+ D
Sbjct: 244 TLWGPKTLENLVELDLAFEVETEKSVLRRQNAGTTETYATVVVRGMISKFTLNCGRSTSD 303
Query: 167 RQYFFVNDRPVDLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFS 226
RQ+ F+N RP L KV K NE+Y+ N+ Q P NF +P + D+NV+PDKR +F
Sbjct: 304 RQFLFINGRPCSLTKVQKAFNEIYRTFNAAQAPFVAANFTLPNGSHDINVSPDKRTIFIH 363
Query: 227 DECSILHALR 236
E +++ L+
Sbjct: 364 SEDNLVQTLK 373
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 54/72 (75%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
+I+ ++ HRI +GQV+ DL +AVKELVENSLDAGATSIE+ K++G + +V+DNG
Sbjct: 12 SIKAMDALSAHRITSGQVVIDLQTAVKELVENSLDAGATSIEVRFKDHGLDSIEVIDNGT 71
Query: 71 GISPNNFKVRAV 82
GI+ ++ V A+
Sbjct: 72 GIASADYDVVAL 83
>gi|386319413|ref|YP_006015576.1| DNA mismatch repair protein MutL [Staphylococcus pseudintermedius
ED99]
gi|323464584|gb|ADX76737.1| DNA mismatch repair protein MutL [Staphylococcus pseudintermedius
ED99]
Length = 646
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 100/191 (52%), Gaps = 21/191 (10%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADE--KYNFERLSQSTVLNQ-QPLLRPLKLDLT 673
M+V+GQ + +II + D+ ++++DQHAA E KY + R V N+ Q LL PL + T
Sbjct: 458 MEVVGQVHGTYIIAQNDEGMYLIDQHAAQERIKYEYYRDKIGEVNNENQSLLIPLTFNFT 517
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
+E+++ H+D +R+ G LE G + + + P + F E+V+++I + +
Sbjct: 518 KDEQLIIEQHLDPLREAGIFLE----PFGGHDYIVDSYP----VWFPQENVEEMIKDMIE 569
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNS 793
+I K+D + R A + +C+ SI L NEM +++ L ++
Sbjct: 570 -----YVIRHKKVD----IAKFREEAAIM-MSCKRSIKANHYLKPNEMADLIDQLGEMED 619
Query: 794 PWNCPHGRPTM 804
P+ CPHGRP +
Sbjct: 620 PFTCPHGRPVI 630
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 43/61 (70%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ ++ + ++I AG+V++ SS VKEL+ENS+DAGAT I I + E G +VVDNG G
Sbjct: 4 IKTLHTSLANKIAAGEVVERPSSVVKELLENSIDAGATEINIEVMESGIASIRVVDNGSG 63
Query: 72 I 72
I
Sbjct: 64 I 64
Score = 41.2 bits (95), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 66/152 (43%), Gaps = 13/152 (8%)
Query: 95 VRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLS 154
+R +N K +L+T GS + + ++GM + L + SD + G+++
Sbjct: 184 IRIALSNDGKK-----ILQTNGSGRTNEVMAEIYGMKVARDLIRIEGDTSD-YHLTGYVA 237
Query: 155 KPGQGSGRNLGDRQY--FFVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRA 211
KP +R Y F+N R + ++K V E Y +YPI +N +
Sbjct: 238 KPEHSRS----NRHYISLFINGRYIKNFLLNKAVQEGYHTLMMIGRYPIVYLNIEMDPVL 293
Query: 212 CDVNVTPDKRKVFFSDECSILHALREGLQEIY 243
DVNV P K +V S E + + ++E +
Sbjct: 294 VDVNVHPTKLEVRLSKEDQLFDLIVAKIREAF 325
>gi|319892318|ref|YP_004149193.1| DNA mismatch repair protein MutL [Staphylococcus pseudintermedius
HKU10-03]
gi|317162014|gb|ADV05557.1| DNA mismatch repair protein MutL [Staphylococcus pseudintermedius
HKU10-03]
Length = 646
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 100/191 (52%), Gaps = 21/191 (10%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADE--KYNFERLSQSTVLNQ-QPLLRPLKLDLT 673
M+V+GQ + +II + D+ ++++DQHAA E KY + R V N+ Q LL PL + T
Sbjct: 458 MEVVGQVHGTYIIAQNDEGMYLIDQHAAQERIKYEYYRDKIGEVNNENQSLLIPLTFNFT 517
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
+E+++ H+D +R+ G LE G + + + P + F E+V+++I + +
Sbjct: 518 KDEQLIIEQHLDPLREAGIFLE----PFGGHDYIVDSYP----VWFPQENVEEMIKDMIE 569
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNS 793
+I K+D + R A + +C+ SI L NEM +++ L ++
Sbjct: 570 -----YVIRHKKVD----IAKFREEAAIM-MSCKRSIKANHYLKPNEMADLIDQLGEMED 619
Query: 794 PWNCPHGRPTM 804
P+ CPHGRP +
Sbjct: 620 PFTCPHGRPVI 630
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 43/61 (70%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ ++ + ++I AG+V++ SS VKEL+ENS+DAGAT I I + E G +VVDNG G
Sbjct: 4 IKTLHTSLANKIAAGEVVERPSSVVKELLENSIDAGATEINIEVMESGIASIRVVDNGSG 63
Query: 72 I 72
I
Sbjct: 64 I 64
Score = 41.2 bits (95), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 66/152 (43%), Gaps = 13/152 (8%)
Query: 95 VRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLS 154
+R +N K +L+T GS + + ++GM + L + SD + G+++
Sbjct: 184 IRIALSNDGKK-----ILQTNGSGRTNEVMAEIYGMKVARDLIRIEGDTSD-YHLTGYVA 237
Query: 155 KPGQGSGRNLGDRQY--FFVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRA 211
KP +R Y F+N R + ++K V E Y +YPI +N +
Sbjct: 238 KPEHSRS----NRHYISLFINGRYIKNFLLNKAVQEGYHTLMMIGRYPIVYLNIEMDPVL 293
Query: 212 CDVNVTPDKRKVFFSDECSILHALREGLQEIY 243
DVNV P K +V S E + + ++E +
Sbjct: 294 VDVNVHPTKLEVRLSKEDQLFDLIVAKIREAF 325
>gi|399890151|ref|ZP_10776028.1| DNA mismatch repair protein [Clostridium arbusti SL206]
Length = 613
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 102/199 (51%), Gaps = 31/199 (15%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTV---LNQQPLLRPLKL 670
F +++IGQ++ +I+ + +D +++DQHAA EK FE+ ++ + ++ Q LL P +
Sbjct: 422 FPDLRIIGQYHNTYILAESAEDFYLIDQHAAHEKILFEKYTKEIMNGSVSAQILLTPEII 481
Query: 671 DLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIST 730
++TPE+ + + DI + GF++E ++ VP G +K+L S
Sbjct: 482 EMTPEDFIYYIENKDIFVRVGFNIE----VFGDNTVSIREVPN----FLGTPQLKELFSA 533
Query: 731 LADN-----QGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKIL 785
+ DN GE + K +A+ AC+++I D L E++ ++
Sbjct: 534 MIDNLKNLGSGETHEVKYNK---------------IATLACKAAIKANDRLNMEEIKALI 578
Query: 786 EHLADLNSPWNCPHGRPTM 804
+ L ++ P+NCPHGRPT+
Sbjct: 579 DDLRCIDEPFNCPHGRPTI 597
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 54/90 (60%), Gaps = 2/90 (2%)
Query: 15 INKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISP 74
+N+ ++I AG+V++ SSAVKELVENS+DA + I I ++E G++ +V D+G GI+P
Sbjct: 1 MNEETSNKIAAGEVLERPSSAVKELVENSIDANSKVITIEIEEGGQKLIRVSDDGDGINP 60
Query: 75 NNFKVRAVFLCQAYALIAKGVRFVCTNTTG 104
+ + FL A + I NT G
Sbjct: 61 ED--IEKAFLPHATSKINAIEDIYAINTLG 88
>gi|15895111|ref|NP_348460.1| DNA mismatch repair protein [Clostridium acetobutylicum ATCC 824]
gi|337737053|ref|YP_004636500.1| DNA mismatch repair protein [Clostridium acetobutylicum DSM 1731]
gi|384458561|ref|YP_005670981.1| DNA mismatch repair protein [Clostridium acetobutylicum EA 2018]
gi|20455120|sp|Q97I20.1|MUTL_CLOAB RecName: Full=DNA mismatch repair protein MutL
gi|15024811|gb|AAK79800.1|AE007692_8 DNA mismatch repair enzyme, MutL [Clostridium acetobutylicum ATCC
824]
gi|325509250|gb|ADZ20886.1| DNA mismatch repair protein [Clostridium acetobutylicum EA 2018]
gi|336292017|gb|AEI33151.1| DNA mismatch repair protein [Clostridium acetobutylicum DSM 1731]
Length = 622
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 103/206 (50%), Gaps = 31/206 (15%)
Query: 610 RKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTV---LNQQPLLR 666
+K F ++VIGQFN +I+ + ++L+I+DQHAA EK FE+ + ++ Q L+
Sbjct: 427 KKAKFPELRVIGQFNNTYILAESFEELYIIDQHAAHEKILFEKYREDIKNKGVSSQILIT 486
Query: 667 PLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKD 726
P ++L PE+ + + ++ + GF +E +K VP + G VKD
Sbjct: 487 PSVVELLPEDFIYYDENKEVFKNAGFVIE----YFGDNTVAIKEVP----LFLGKPLVKD 538
Query: 727 LISTLADN-----QGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEM 781
L + DN GE S + + R+ +A+ AC+S++ L +EM
Sbjct: 539 LFLEIIDNLKNMGSGETSEV--------------KYRS-IATAACKSAVKAYHELTHDEM 583
Query: 782 QKILEHLADLNSPWNCPHGRPTMRHL 807
+ +++ L P+NCPHGRPT+ L
Sbjct: 584 KTLIQDLRFAEDPFNCPHGRPTIVRL 609
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 21 HRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFKVR 80
++I AG+V++ S VKELVENS+DAGA +I I ++ G +V+D+G GI ++ +
Sbjct: 12 NKIAAGEVVERPFSVVKELVENSIDAGAKTINIEIENGGRTLIKVLDDGYGIDKDD--IE 69
Query: 81 AVFLCQAYALIAKGVRFVCTNTTG 104
F+ A + I+K NT G
Sbjct: 70 KAFMPHATSKISKLQDIYSINTLG 93
>gi|300855301|ref|YP_003780285.1| DNA mismatch repair protein MutL [Clostridium ljungdahlii DSM
13528]
gi|300435416|gb|ADK15183.1| predicted DNA mismatch repair protein MutL [Clostridium ljungdahlii
DSM 13528]
Length = 610
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 106/202 (52%), Gaps = 23/202 (11%)
Query: 610 RKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQST---VLNQQPLLR 666
R F +++IGQF+ +II + +L+++DQHAA EK FE+ +S ++ Q L+
Sbjct: 415 RVAKFQPLRIIGQFHSTYIIAEDSSNLYMIDQHAAHEKILFEKYKKSIQKGMVLSQVLIT 474
Query: 667 PLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKD 726
P+ ++LT ++ + D+ +K GF++E ++ VP + G D+K+
Sbjct: 475 PVIMELTIKDYNCFIENRDLFKKTGFNVE----LFGNNTISIREVP----MILGKPDMKN 526
Query: 727 LISTLADNQGECSIISSYKMDTADSVCPSRVRAM-LASRACRSSIMIGDALGRNEMQKIL 785
L + DN M + D+ V+ + LA+ AC+++I ++ EM ++
Sbjct: 527 LFMDILDNLKN--------MGSGDT---WEVKYLSLATLACKAAIKANASISEIEMNHLI 575
Query: 786 EHLADLNSPWNCPHGRPTMRHL 807
E L ++ P+NCPHGRPT+ L
Sbjct: 576 EELRFIDDPFNCPHGRPTIIKL 597
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 54/81 (66%), Gaps = 2/81 (2%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I +++ ++I AG+V++ SS +KEL+ENS+D+GA +I I ++E GE+ +++D+G G
Sbjct: 5 INLLDENTSNKIAAGEVVEGPSSVIKELLENSIDSGAKNITIEIEEGGEKSIKIIDDGWG 64
Query: 72 ISPNNFKVRAVFLCQAYALIA 92
I P ++ F+ A + I+
Sbjct: 65 IHP--LDIKKAFMPHATSKIS 83
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 78/164 (47%), Gaps = 23/164 (14%)
Query: 112 LKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFL--SKPGQGSGRNLGDRQY 169
L T G+ + D I V+G NIY + PV SD + G++ S+ +GS N Q
Sbjct: 198 LTTYGTGKVMDVIRCVYGKNIYENIIPVE-KHSDIISICGYIGNSEISRGSRNN----QS 252
Query: 170 FFVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDE 228
F+N R V ++ + +K + ++P I+ + DVNV P K +V FSD
Sbjct: 253 IFINKRYVKNKSITSAAEQAFKSFLTINKFPFFILFIDIFPEFVDVNVHPAKWEVKFSDS 312
Query: 229 C--------SILHALREGLQEIYSPNNASYSVNKVEQLIEPEKS 264
+I ALRE L++ S++++ E ++P+K+
Sbjct: 313 RMVFKFVFDAIHEALRESLKD-------SFTIDLKEDDLKPKKT 349
>gi|255280935|ref|ZP_05345490.1| DNA mismatch repair protein MutL [Bryantella formatexigens DSM
14469]
gi|255268383|gb|EET61588.1| DNA mismatch repair domain protein [Marvinbryantia formatexigens
DSM 14469]
Length = 743
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 108/222 (48%), Gaps = 21/222 (9%)
Query: 586 SQPENEERKARALAAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAAD 645
+QPE + E ++L KE ++IGQ + I + LF++DQHAA
Sbjct: 524 AQPEAPAAGVTGEQMSLFEDDKLLSKEHVKEHRIIGQVFDTYWIVQFKDKLFLIDQHAAH 583
Query: 646 EKYNFERLSQSTV---LNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALA 702
EK +ER+ +S Q L P+ L L+ EE + + + R+ GF +EE
Sbjct: 584 EKVLYERMKKSMEKREFTSQLLNPPVILTLSMAEEELLKKYQERFREIGFEIEE----FG 639
Query: 703 GLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLA 762
G + L+AVP + FG+ D KDL + D G + + ++T D +A
Sbjct: 640 GREYALRAVPDN---LFGLAD-KDLFLEMLD--GLSAQTDALSIETIDD--------KIA 685
Query: 763 SRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTM 804
+ +C++++ L E+ +++ L L +P+NCPHGRPT+
Sbjct: 686 TMSCKAAVKGNSRLSTAEIHALIDELLTLENPYNCPHGRPTI 727
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 74/148 (50%), Gaps = 15/148 (10%)
Query: 96 RFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSK 155
+F+ N T L T G+ LKD I ++G +I L ++ +DS ++ GF+ K
Sbjct: 188 KFIANNQTK-------LHTSGNHQLKDIIYHIYGRDIAANLIEIS-AGTDSVRINGFIGK 239
Query: 156 PGQGSGRNLGDRQY--FFVNDRPVDLPKVSKLVNELYKGANSR-QYPIAIMNFIVPTRAC 212
P + G+R Y +FVN R + ++K + + Y + +YP ++NF + +
Sbjct: 240 PVI----SRGNRNYENYFVNGRYIRSNIIAKAIEDAYHTFMMKHKYPFTVLNFTIDGKLL 295
Query: 213 DVNVTPDKRKVFFSDECSILHALREGLQ 240
DVNV P K ++ F++ + + E ++
Sbjct: 296 DVNVHPAKLELRFAENEEMYRIVYEAVR 323
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I +++ + +I AG+VI+ +S VKELVEN++DAGA ++ + +K+ G ++ DNG G
Sbjct: 4 IAVLDEQTIDKIAAGEVIERPASIVKELVENAIDAGANAVTVEIKDGGISLIRITDNGSG 63
Query: 72 ISPNNFKVRAVFLCQAYALIAKG 94
I V F A + I K
Sbjct: 64 IEAKQVPV--AFWRHATSKIRKA 84
>gi|448577264|ref|ZP_21642894.1| DNA mismatch repair protein MutL [Haloferax larsenii JCM 13917]
gi|445727909|gb|ELZ79518.1| DNA mismatch repair protein MutL [Haloferax larsenii JCM 13917]
Length = 550
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 95/194 (48%), Gaps = 24/194 (12%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLS---QSTVLNQQPLLRPLKL 670
F ++VIGQF +++ ++ +L ++DQHAA E+ N+ERL + ++ P+ P +
Sbjct: 358 FDDVRVIGQFRDLYVLCEVGDELLVIDQHAAHERVNYERLRAAVEEAGVDSVPVDPPANV 417
Query: 671 DLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIST 730
L+P E + + D + + GF + + G +R++AVP F + + D++S
Sbjct: 418 SLSPPEAALLEANRDAVERLGFRVAD----FGGETYRVEAVPAPLGRPFSPDALADVVSD 473
Query: 731 LADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLAD 790
LA G+ D D +L AC SI GD L E +++ L
Sbjct: 474 LA--AGDV-------RDPRDE--------LLKDLACHPSIKAGDDLSVEEATRLVSRLGS 516
Query: 791 LNSPWNCPHGRPTM 804
+P+ CPHGRPT+
Sbjct: 517 CETPYTCPHGRPTV 530
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 41/65 (63%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I +++ +I AG+V+ +S V ELVEN+LDAGA ++EI + G + +V D+G G
Sbjct: 2 IHELDRQTRAQIAAGEVVTRPASVVVELVENALDAGAETVEIEVGGDGTDRIRVSDDGSG 61
Query: 72 ISPNN 76
++ +
Sbjct: 62 MTERD 66
>gi|373469165|ref|ZP_09560374.1| DNA mismatch repair protein [Lachnospiraceae bacterium oral taxon
082 str. F0431]
gi|371765047|gb|EHO53411.1| DNA mismatch repair protein [Lachnospiraceae bacterium oral taxon
082 str. F0431]
Length = 645
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 105/201 (52%), Gaps = 23/201 (11%)
Query: 608 LFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERL---SQSTVLNQQPL 664
F E MKVIGQ + I +L+ +++I+DQHAA EK +ERL S++ L+ Q +
Sbjct: 448 FFESESKKYMKVIGQVFDTYWIVQLENEMYIIDQHAAHEKVMYERLLKESKANKLSSQMI 507
Query: 665 LRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDV 724
P+ + LT E+ V + HM+ GF +EE G +++ A+P I +
Sbjct: 508 NPPIIVTLTDLEQNVLNEHMEEFISIGFDIEE----FGGKEYKINAIP---NIFPSIPKA 560
Query: 725 KDLISTLADNQGECSIISSYKMDTADSVCPSR-VRAMLASRACRSSIMIGDALGRNEMQK 783
+ L+D+ ++Y D + PS + A +AS +C+++I + E +
Sbjct: 561 ELFNEMLSDS-------TNY-----DVISPSELILAKVASMSCKAAIKGNMRISLLEANE 608
Query: 784 ILEHLADLNSPWNCPHGRPTM 804
+ + L L++P+NCPHGRPT+
Sbjct: 609 LFDELLSLDNPYNCPHGRPTV 629
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 57/93 (61%), Gaps = 2/93 (2%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I ++K + +I AG+V++ +S VKEL+ENS+DAG++S+ I +K G + ++ DNGCG
Sbjct: 2 INILDKDTIDKIAAGEVVERPASIVKELLENSIDAGSSSVTIEIKNGGIDLIRITDNGCG 61
Query: 72 ISPNNFKVRAVFLCQAYALIAKGVRFVCTNTTG 104
IS + +V+ FL A + I + + G
Sbjct: 62 ISSD--EVKKAFLRHATSKIVSDKDLISIKSLG 92
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 71/141 (50%), Gaps = 8/141 (5%)
Query: 110 VVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPG-QGSGRNLGDRQ 168
+ L+T GS +LKD + ++G I L V K + K++G +++P S RNL +
Sbjct: 193 IKLQTNGSGNLKDIVYQLYGKEISKALCNVDYEK-NGIKIKGVVARPEVTRSSRNL---E 248
Query: 169 YFFVNDRPVDLPKVSKLVNELYKG-ANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSD 227
FVN R + +SK V + + QYP +NF DVNV P K +V FSD
Sbjct: 249 NIFVNGRYIKDNIISKAVEDGFGDRLMQHQYPFCALNF--DLNGVDVNVHPRKMEVRFSD 306
Query: 228 ECSILHALREGLQEIYSPNNA 248
+ +E ++EI++ +A
Sbjct: 307 RNFVYDNTKEAVEEIFTTQSA 327
>gi|395645812|ref|ZP_10433672.1| DNA mismatch repair protein mutL [Methanofollis liminatans DSM
4140]
gi|395442552|gb|EJG07309.1| DNA mismatch repair protein mutL [Methanofollis liminatans DSM
4140]
Length = 581
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 96/189 (50%), Gaps = 19/189 (10%)
Query: 617 MKVIGQFNLGFIIGKLD-QDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPE 675
++VIGQ + +I+G + + L ++DQHAA E+ +E+ Q L+ P+ + +P+
Sbjct: 396 IEVIGQLDAMYIVGSAEGRSLVVIDQHAAHERVLYEQAQDRAGPGSQELIVPVLVTFSPQ 455
Query: 676 EEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQ 735
E +A + + + GF LEE + + A+P E ++DL+S L
Sbjct: 456 EAELAREALPTLAEEGFVLEE----FGPSTYAVNAIPVVLGKLEEPEVIRDLVSAL---- 507
Query: 736 GECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPW 795
+ +D V + A+L ACR +I GD L R +M+++++ LA +P+
Sbjct: 508 --------VRESPSDPV--GKREAVLRRVACRGAIKAGDHLSREQMRRLIDQLARTKNPY 557
Query: 796 NCPHGRPTM 804
CPHGRPT+
Sbjct: 558 TCPHGRPTI 566
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/130 (23%), Positives = 63/130 (48%), Gaps = 4/130 (3%)
Query: 112 LKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFF 171
+ T + LK+ + +FG + L PV++ K+ +V G++S P + +
Sbjct: 203 IATHATDDLKETVAALFGTAVAKGLVPVSL-KTPLVQVAGYISTPAVSRADQY--QVFLS 259
Query: 172 VNDRPVDLPKVSKLVNELYKGANSR-QYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECS 230
+N RP+ ++ + + E Y + ++P+A ++ + DVNV P K+ V S E
Sbjct: 260 INARPISSLQIVRAIKEGYGTLLPKDRFPVAFLSIGINGDLVDVNVHPTKKLVRLSHEKE 319
Query: 231 ILHALREGLQ 240
I A+ + ++
Sbjct: 320 IYGAIADAVR 329
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
Query: 8 NSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGA--TSIEIALKEYGEEWFQV 65
N TI+ +++ V++I AG+V++ +S VKELVEN++DAGA +E+ +V
Sbjct: 2 NGTTIQVLDERTVNQIAAGEVVERPASVVKELVENAIDAGARLVRVEVTSDRNHVTAVRV 61
Query: 66 VDNGCGIS 73
VD+G G+
Sbjct: 62 VDDGAGMG 69
>gi|435852398|ref|YP_007313984.1| DNA mismatch repair protein MutL [Methanomethylovorans hollandica
DSM 15978]
gi|433663028|gb|AGB50454.1| DNA mismatch repair protein MutL [Methanomethylovorans hollandica
DSM 15978]
Length = 612
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 99/202 (49%), Gaps = 22/202 (10%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEE 676
+KV+GQF ++I ++++ L ++DQHAA E+ +ER+ S + Q LL P+ L+L P+E
Sbjct: 426 VKVMGQFGDLYVIAEVEKKLLLIDQHAAHERVMYERVMDSRDMGWQELLNPVTLELNPKE 485
Query: 677 EVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQG 736
V+ + + + GFS+ E + + VP FG + D++ + +
Sbjct: 486 RVILEEFIPYLEEVGFSISE----FGPDTYVVTTVP----TIFGRMESPDVVHDIVSDLL 537
Query: 737 ECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWN 796
I + D V ++ ACR++I G + +M ++ L +P+
Sbjct: 538 SVGRIKD-DTEIYDHV--------FSTMACRAAIKAGAVCNKEQMADLIRQLKKCKNPYT 588
Query: 797 CPHGRPTMRHLVDLTTIRKNID 818
CPHGRPTM L+ R+ +D
Sbjct: 589 CPHGRPTM-----LSFTREELD 605
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 88/184 (47%), Gaps = 15/184 (8%)
Query: 88 YALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSC 147
YA+ + F N GK VVL++ ++++ DNI+ + G + L V + ++D
Sbjct: 187 YAIAHPDISFTLLNE-GK----VVLRSPATNNMFDNIVHIHGAEVARLLVSV-VWENDLV 240
Query: 148 KVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSR-QYPIAIMNFI 206
K+ G++SKP R+ D Q F++N R + +S + Y + +YP A +
Sbjct: 241 KISGYISKPELS--RSGSDLQSFYINGRSITSKAISNAIRLGYYTLLPKGRYPAAFLKLE 298
Query: 207 VPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNN------ASYSVNKVEQLIE 260
+ R DVNV P K +V S E I+ A+ ++ S N+ Y + V++++
Sbjct: 299 IDPRIVDVNVHPRKTEVRLSHEKEIMEAVTAAVENALSSNHLVPEIKVKYKPSPVQKVLY 358
Query: 261 PEKS 264
KS
Sbjct: 359 EHKS 362
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 45/67 (67%)
Query: 7 TNSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVV 66
+S I ++ + +I AG+VI+ +SAVKEL++NS+DAGAT I++ ++ G + V
Sbjct: 8 VDSNRIHLLDDDTISKIAAGEVIERPASAVKELLDNSIDAGATEIKVEIEGSGVKRIAVR 67
Query: 67 DNGCGIS 73
DNG G+S
Sbjct: 68 DNGHGMS 74
>gi|295099687|emb|CBK88776.1| DNA mismatch repair enzyme (predicted ATPase) [Eubacterium
cylindroides T2-87]
Length = 370
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 127/246 (51%), Gaps = 25/246 (10%)
Query: 568 TSGSVKMRRCFAAATLE-LSQPENEERKARALAAATTELERLFRKEDFGRMKVIGQFNLG 626
T+ S+K + LE L++PE ++ ++ +E+ E F +KVIGQ
Sbjct: 136 TNPSIKEEKIEYPTELEVLTKPELQKEES---IQEIESVEKAVGYEFFYHLKVIGQLKDS 192
Query: 627 FIIGKLDQDLFIVDQHAADEKYNFERLSQST---VLNQQPLLRPLKLDLTPEEEVVASMH 683
+I+ + ++ L I+DQHAA E+Y++E L ++ N QPL+ P++LD++ +++ ++
Sbjct: 193 YILCENEEGLVIIDQHAAQERYHYEMLQETLNKPCNNLQPLMLPIQLDVS--SNIMSQVN 250
Query: 684 MDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISS 743
+ + F LE +P L R +I +DV + + L D ++
Sbjct: 251 TINEKTSFFGLEFEPFGNDQLIVR--------EIPLWFQDVHEE-AFLYD------LLDL 295
Query: 744 YKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPT 803
++ D + R + +LA+ AC SSI +L +EM++++E L P++CPHGRPT
Sbjct: 296 FEKDNEIDMSKLR-KHVLATMACHSSIRFNRSLTMDEMKQVIEDLKKCKQPYHCPHGRPT 354
Query: 804 MRHLVD 809
+ + D
Sbjct: 355 IITMSD 360
>gi|375308897|ref|ZP_09774179.1| DNA mismatch repair protein mutL [Paenibacillus sp. Aloe-11]
gi|375079109|gb|EHS57335.1| DNA mismatch repair protein mutL [Paenibacillus sp. Aloe-11]
Length = 733
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 94/373 (25%), Positives = 154/373 (41%), Gaps = 57/373 (15%)
Query: 447 IAKLNKIEPFKCNKADKVSKEIENILSSEGNTNEKPREELVTQEKATPLLNVPSIVSSSN 506
+A L +P + N+ + +E N P EL T + P ++ S +S ++
Sbjct: 387 VASLKGQDPRQSNRLN----------GNEENRRVSPERELRTHREGVPAIDRASALSGTS 436
Query: 507 -----------DLKKNSEDLSVAASHLQFSGSILDAPVPSSSLDICSTLQFSIQDLRKRR 555
D S +S+ +H Q SG+ + +++ S ++Q+
Sbjct: 437 VSDEELNADFVDENNGSGGMSLPGAHRQSSGA-QEVQGDEAAVGTSSVYSGAVQETAASA 495
Query: 556 QQRLSIMQSSCHTSGSVKMRRCFAAATLELSQPENEERKARALAAATTELERLFRKEDFG 615
R S+ S+ + + S R F +P A LAA + E L F
Sbjct: 496 TYRSSVAPSAGNAADS----RYFTD-----EKPRQPRLNAEQLAAMSGEAPEL---PTFP 543
Query: 616 RMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYN----FERLSQSTVLNQQPLLRPLKLD 671
+ +IGQ + ++I + DQ L+++DQHAA E+ N +E+ ++Q+ LL P+ LD
Sbjct: 544 ELNLIGQHHGTYLIAQNDQGLYLIDQHAAHERVNYEFYYEKFGNPESVSQE-LLLPITLD 602
Query: 672 LTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTL 731
TP E + + G LE G FR+ + P+ + G E D+I +
Sbjct: 603 FTPSETEKLKTRLHWFEQAGVYLEH----FGGQTFRVSSYPY--WLPKGEE--ADVIEEM 654
Query: 732 ADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADL 791
A E I K+ A S+ S CR+SI L + +LE LA
Sbjct: 655 AGWVLEEKAIDLAKLREAASIMCS----------CRASIKANQKLTDRQAVVLLERLAAC 704
Query: 792 NSPWNCPHGRPTM 804
P+ CPHGRP +
Sbjct: 705 KQPYTCPHGRPIV 717
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 54/83 (65%), Gaps = 2/83 (2%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR +++ + ++I AG+V++ SS VKELVEN++DAG T ++++++E G + +V DNG G
Sbjct: 4 IRVLDEHIANQIAAGEVVERPSSVVKELVENAIDAGGTRVDVSVEEGGLQSIRVTDNGSG 63
Query: 72 ISPNNFKVRAVFLCQAYALIAKG 94
I P + V F A + I G
Sbjct: 64 IEPED--VETAFYRHATSKIGHG 84
>gi|402312100|ref|ZP_10831030.1| DNA mismatch repair protein, C-terminal domain protein
[Lachnospiraceae bacterium ICM7]
gi|400370761|gb|EJP23743.1| DNA mismatch repair protein, C-terminal domain protein
[Lachnospiraceae bacterium ICM7]
Length = 660
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 103/201 (51%), Gaps = 23/201 (11%)
Query: 608 LFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERL---SQSTVLNQQPL 664
F E +KVIGQ + I +L+ +++I+DQHAA EK +ERL S+ ++ Q +
Sbjct: 463 FFDTEAKKYIKVIGQVFDTYWIVQLENEMYIIDQHAAHEKVMYERLLKESRDNKISAQMI 522
Query: 665 LRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDV 724
P+ + LT E+ V + HMD + GF +EE G +++ ++P I +
Sbjct: 523 NPPIIVTLTDLEQDVLNKHMDEFKAAGFDIEE----FGGKEYKINSIP---NIFPSIPKA 575
Query: 725 KDLISTLADNQGECSIISSYKMDTADSVCPSR-VRAMLASRACRSSIMIGDALGRNEMQK 783
+ LAD+ ++Y D + PS + A AS AC+++I + E
Sbjct: 576 ELFNEMLADS-------TNY-----DIISPSELILAKTASMACKAAIKGNMRISLVEAND 623
Query: 784 ILEHLADLNSPWNCPHGRPTM 804
+ + L L++P+NCPHGRPT+
Sbjct: 624 LFDELLSLDNPYNCPHGRPTI 644
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 56/93 (60%), Gaps = 2/93 (2%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I ++KG + +I AG+V++ +S VKEL+ENS+DAG++SI + +K G + ++ DNGCG
Sbjct: 2 INILDKGTIDKIAAGEVVERPASIVKELLENSIDAGSSSITVEIKNGGIDLIRITDNGCG 61
Query: 72 ISPNNFKVRAVFLCQAYALIAKGVRFVCTNTTG 104
I +V+ FL A + I + + G
Sbjct: 62 IDSK--EVKTAFLRHATSKIVSDKDLISIKSLG 92
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 71/139 (51%), Gaps = 14/139 (10%)
Query: 110 VVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPG-QGSGRNLGDRQ 168
V L+T G+ +LKD I ++G I L V K D K++G +++P S R+L +
Sbjct: 193 VKLQTNGNGNLKDIIYQLYGKEISKALCAVDYEK-DGVKIKGVIARPEVTRSSRSL---E 248
Query: 169 YFFVNDRPVDLPKVSKLVNELYKGANSR----QYPIAIMNFIVPTRACDVNVTPDKRKVF 224
FVN R + +SK + + G R QYP ++F + DVNV P K +V
Sbjct: 249 NIFVNGRYIKDNIISKAIED---GFGDRLMQHQYPFCALSFYL--EGVDVNVHPRKMEVR 303
Query: 225 FSDECSILHALREGLQEIY 243
FSD I + +E ++EI+
Sbjct: 304 FSDGNHIYNCTKEAVEEIF 322
>gi|355712460|gb|AES04354.1| PMS2 postmeiotic segregation increased 2 [Mustela putorius furo]
Length = 227
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 56/70 (80%)
Query: 9 SPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDN 68
+ I+PI++ VH+IC+GQV+ LS+AVKELVENS+DAGAT+I++ LK+YG +V DN
Sbjct: 5 AKAIKPIDRKSVHQICSGQVVLSLSTAVKELVENSVDAGATTIDLRLKDYGVALIEVSDN 64
Query: 69 GCGISPNNFK 78
GCG+ +NF+
Sbjct: 65 GCGVEEDNFE 74
Score = 42.7 bits (99), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFG 129
+ V + AY +I+ G+R C+N G + V+ T GS S+K+NI +VFG
Sbjct: 176 KMVQVLHAYCIISAGIRVSCSNQVGPGRRQPVVCTSGSRSVKENIASVFG 225
>gi|31873629|emb|CAD97782.1| hypothetical protein [Homo sapiens]
Length = 185
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 58/75 (77%), Gaps = 2/75 (2%)
Query: 6 PTNSPT--IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWF 63
P+ P I+PI++ VH+IC+GQV+ LS+AVKELVENSLDAGAT+I++ LK+YG +
Sbjct: 74 PSTEPAKAIKPIDRKSVHQICSGQVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVDLI 133
Query: 64 QVVDNGCGISPNNFK 78
+V DNGCG+ NF+
Sbjct: 134 EVSDNGCGVEEENFE 148
>gi|373123476|ref|ZP_09537322.1| DNA mismatch repair protein MutL [Erysipelotrichaceae bacterium
21_3]
gi|371660809|gb|EHO26053.1| DNA mismatch repair protein MutL [Erysipelotrichaceae bacterium
21_3]
Length = 695
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/230 (29%), Positives = 114/230 (49%), Gaps = 28/230 (12%)
Query: 579 AAATLELSQPENEERKARALAAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFI 638
A A +E+SQ E + +A + L +++VIGQF+ +I+ + ++ L+I
Sbjct: 475 AVAYMEISQSEELVYEKKAEVEQSQPL-----NPSLPQLRVIGQFHSCYILAEGEKGLYI 529
Query: 639 VDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMD----IIRKNGFSL 694
+DQHAA E+Y++E + + +L+ +PL L +T E + A D ++ + G L
Sbjct: 530 IDQHAAQERYHYE-IIRKQILDGNNDTQPLLLPITIESTISAVSQADDLNALLEQLGIHL 588
Query: 695 EEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCP 754
E F + +P K VE+ L C +I ++ D S+
Sbjct: 589 E----VFGDHTFVCRQLPLWMK---DVEEEAFL----------CDMIDIWEKDKEISLDK 631
Query: 755 SRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTM 804
R A +A+ AC SSI +L +EM++++E LA P++CPHGRPTM
Sbjct: 632 LRKHA-IATMACHSSIRFNRSLTLDEMKRVIEDLAHCEQPFHCPHGRPTM 680
Score = 47.8 bits (112), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 81/166 (48%), Gaps = 19/166 (11%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICK 143
+ Q +AL + F C + G+ V KT+GS +L + ++ ++G + + +++
Sbjct: 172 VVQKFALSHPEIGF-CLSHDGRTV----FKTKGSGNLLEVLMQIYGRD--SAKSAISLDG 224
Query: 144 SDS-CKVEGFLSKPGQGSGRNLGDRQY--FFVNDRPVDLPKVSKLVNELYKGANSR-QYP 199
SD K++G++ +P N + Y ++N R + + K + + Y + +YP
Sbjct: 225 SDQDYKIKGYIMQPQ----FNRATKYYMLLYINGRMIRNYHLQKAILDAYSPYMPKDRYP 280
Query: 200 IAIMNFIVPTRACDVNVTPDKRKVFFSDECS----ILHALREGLQE 241
I +++ ++ + DVNV P K ++ S E + +R+ LQE
Sbjct: 281 IVVIDLLMDAQLVDVNVHPSKWEIRLSKEKQLEKLLYETIRKALQE 326
Score = 47.0 bits (110), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 41/65 (63%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I +++ + + I AG+V++ VKELVEN +DA A++IEI + + G ++D+G G
Sbjct: 4 INRLDEHLSNMIAAGEVVERPQGIVKELVENCIDAHASNIEIQISQGGIATITIIDDGDG 63
Query: 72 ISPNN 76
+ P +
Sbjct: 64 MDPED 68
>gi|331091140|ref|ZP_08339982.1| hypothetical protein HMPREF9477_00625 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330405362|gb|EGG84898.1| hypothetical protein HMPREF9477_00625 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 638
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 151/329 (45%), Gaps = 45/329 (13%)
Query: 482 PREELV--TQEKATPLLNVPSIVSSSNDLKKNSEDLSVAASHLQFSGSILDAPVPSSSLD 539
PR E+ T+EK P VP + + +KK E V + H Q +S +
Sbjct: 333 PRVEISKPTEEKNVPEKKVPEVHDEAYFMKKMRE--RVQSYHRQ-----------ASQAE 379
Query: 540 ICSTLQFSIQDLRKRRQQRLSIMQSSCHTSGSVKMRRCFAAATLELSQPE-NEERKARAL 598
+ T + +L+ R I ++ + + R A ++ +QP+ ++E KA L
Sbjct: 380 VKDTTELHRGNLQIDR-----IKEAVTYNKNREREERS-AQPVMQPAQPDMSQEMKAEQL 433
Query: 599 AAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERL---SQ 655
E+L K+ K+IGQ + + + + L+I+DQHAA E+ +E+ +
Sbjct: 434 NFFE---EKLLTKKAVQEYKLIGQVFDTYWLVEFQEQLYIIDQHAAHERVLYEKTLHGMK 490
Query: 656 STVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSK 715
Q L P+ L+L+ +E + + HMD+ K GF +E G F ++AVP +
Sbjct: 491 DRTFTSQYLSPPIILNLSMQEARLLTEHMDLFSKIGFEIEN----FGGDSFAVRAVPDN- 545
Query: 716 KITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDA 775
F + K+L+ + DN + D + P + +A+ +C++++
Sbjct: 546 --LFSIAK-KELLMEMLDNLSD---------DITSAEAPDLIGEKIAAMSCKAAVKGNAK 593
Query: 776 LGRNEMQKILEHLADLNSPWNCPHGRPTM 804
L E+ ++ L +L +P++CPHGRPT+
Sbjct: 594 LSSAEVNALIGELLELENPYHCPHGRPTI 622
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 46/63 (73%)
Query: 10 PTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNG 69
P I+ +++ + +I AG+VI+ +S VKELVEN++DA AT++ + +KE G + ++ DNG
Sbjct: 2 PNIQVLDQITIDKIAAGEVIERPASIVKELVENAIDANATAVTVEIKEGGISFIRITDNG 61
Query: 70 CGI 72
CGI
Sbjct: 62 CGI 64
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 70/154 (45%), Gaps = 23/154 (14%)
Query: 112 LKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQY-- 169
L T G+ +KD I VFG I N L V +V G++ KP G +R Y
Sbjct: 197 LHTAGNGKVKDVIYHVFGREIANNLLEVN-RDEGKMRVSGYIGKPLISRG----NRNYEN 251
Query: 170 FFVNDRPVDLPKVSKLVNELYKGAN-SRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDE 228
+++N R V ++K + + YK +YP +++F + DVNV P K ++ FS
Sbjct: 252 YYINGRYVKSNIIAKAIEDAYKDFTMQHKYPFTVLHFWLDGNDIDVNVHPTKMELRFSHR 311
Query: 229 CSILHALREGLQEIYSPNNASYSVNKVEQLIEPE 262
QE+Y + Y K E LIEPE
Sbjct: 312 -----------QEVY---DFVYRAVK-ETLIEPE 330
>gi|20089411|ref|NP_615486.1| DNA mismatch repair protein [Methanosarcina acetivorans C2A]
gi|19914309|gb|AAM03966.1| DNA mismatch repair protein [Methanosarcina acetivorans C2A]
Length = 656
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 99/188 (52%), Gaps = 17/188 (9%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEE 676
+++IGQ + +I+ + +DL I+DQHAA E+ +E++ ++ Q L+ P+ ++LTP+E
Sbjct: 470 LRIIGQVSKMYILAEKGEDLVIIDQHAAHERVLYEQVLRTKKARVQELITPVMIELTPKE 529
Query: 677 EVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQG 736
V+ ++ + + GF + E V F ++ +ED + ++D
Sbjct: 530 RVLMEEYIPHLEEYGFGISE-------FGDNTYVVTFVPEVFGRLEDTGVIHDVISDLLA 582
Query: 737 ECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWN 796
E + K DT S S+ + ACR++I G A +M++++E L SP++
Sbjct: 583 EGKV----KKDTGISEKVSK------TLACRAAIKGGAACNTRQMEELIEQLKAAESPYS 632
Query: 797 CPHGRPTM 804
CPHGRPT+
Sbjct: 633 CPHGRPTV 640
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 76/147 (51%), Gaps = 4/147 (2%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYF 170
V+++ GSS L +++ + G + + P+ +++ ++ G++SKP + R D+ Y
Sbjct: 200 VIRSTGSSDLFKSLVNLLGPDTARSMLPLE-YRTEDFEIRGYVSKPE--TNRGGSDQLYV 256
Query: 171 FVNDRPVDLPKVSKLVNE-LYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDEC 229
FVN RPV ++ V E Y +YP+A++ + DVNV P K +V FS E
Sbjct: 257 FVNTRPVTSRAINMAVREGYYTKIPKGRYPVAVLALTLNPEEVDVNVHPRKAEVRFSREK 316
Query: 230 SILHALREGLQEIYSPNNASYSVNKVE 256
+ A+ ++++ S + + V + E
Sbjct: 317 EVGDAVIRAVEKVLSEHGLAPEVREKE 343
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 46/62 (74%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR +++ +++I AG+VI+ +S VKELV+NS+DAGAT I I +++ G+ + DNGCG
Sbjct: 8 IRILDRDTINKIAAGEVIERPASVVKELVDNSIDAGATEIRIEVEKGGKHSILIRDNGCG 67
Query: 72 IS 73
+S
Sbjct: 68 MS 69
>gi|404482177|ref|ZP_11017404.1| DNA mismatch repair protein MutL [Clostridiales bacterium OBRC5-5]
gi|404344338|gb|EJZ70695.1| DNA mismatch repair protein MutL [Clostridiales bacterium OBRC5-5]
Length = 659
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 101/201 (50%), Gaps = 23/201 (11%)
Query: 608 LFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERL---SQSTVLNQQPL 664
F E +KVIGQ + I +L +++I+DQHAA EK +ERL S+ ++ Q +
Sbjct: 462 FFDTEAKKYIKVIGQVFDTYWIVQLRNEMYIIDQHAAHEKVMYERLLKESKDNKISSQMI 521
Query: 665 LRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDV 724
P+ + LT E+ V HMD R GF +EE G +++ ++P I +
Sbjct: 522 NPPIIVTLTDLEQDVLIKHMDEFRAVGFDIEE----FGGKEYKINSIP---NIFPSIPKA 574
Query: 725 KDLISTLADNQGECSIISSYKMDTADSVCPSR-VRAMLASRACRSSIMIGDALGRNEMQK 783
+ LAD+ ++Y D + PS + A AS AC+++I + E
Sbjct: 575 ELFNEMLADS-------TNY-----DIISPSELILAKTASMACKAAIKGNMRISLMEAND 622
Query: 784 ILEHLADLNSPWNCPHGRPTM 804
+ + L L++P+NCPHGRPT+
Sbjct: 623 LFDELLSLDNPYNCPHGRPTI 643
Score = 67.0 bits (162), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 56/93 (60%), Gaps = 2/93 (2%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I ++KG + +I AG+V++ +S VKEL+ENS+DAG++SI + +K G + ++ DNGCG
Sbjct: 2 INILDKGTIDKIAAGEVVERPASIVKELLENSIDAGSSSITVEIKNGGIDLIRITDNGCG 61
Query: 72 ISPNNFKVRAVFLCQAYALIAKGVRFVCTNTTG 104
I +V+ FL A + I + + G
Sbjct: 62 IDSK--EVKTAFLRHATSKIVSDKDLISIKSLG 92
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 71/139 (51%), Gaps = 14/139 (10%)
Query: 110 VVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPG-QGSGRNLGDRQ 168
V L+T G+ +LKD I ++G I L V K D K++G +++P S R+L +
Sbjct: 193 VKLQTNGNGNLKDIIYQLYGKEISKALCAVDYEK-DGVKIKGVIARPEVTRSSRSL---E 248
Query: 169 YFFVNDRPVDLPKVSKLVNELYKGANSR----QYPIAIMNFIVPTRACDVNVTPDKRKVF 224
FVN R + +SK + + G R QYP ++F + DVNV P K +V
Sbjct: 249 NIFVNGRYIKDNIISKAIED---GFGDRLMQHQYPFCALSFYL--EGVDVNVHPRKMEVR 303
Query: 225 FSDECSILHALREGLQEIY 243
FSD I + +E ++EI+
Sbjct: 304 FSDGNHIYNCTKEAVEEIF 322
>gi|448620282|ref|ZP_21667630.1| DNA mismatch repair protein MutL [Haloferax denitrificans ATCC
35960]
gi|445757070|gb|EMA08426.1| DNA mismatch repair protein MutL [Haloferax denitrificans ATCC
35960]
Length = 567
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 100/206 (48%), Gaps = 22/206 (10%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQ---STVLNQQPLLRPLKL 670
F ++VIG+F +++ + +L +VDQHAA E+ N+ERL + S ++ + P +
Sbjct: 369 FDDLRVIGRFRGLYLLCEAGDELLVVDQHAAHERINYERLREAVESAGVDSVAVDPPATV 428
Query: 671 DLTPEEEVVASMHMDIIRKNGFSLEE--DPHALAGLRFRLKAVPFSKKITFGVEDVKDLI 728
L+P + + + D + + GF + E D +R++AVP F + + D++
Sbjct: 429 SLSPTDAALLDANRDFVERLGFRVAEFDDGSGTGTGTYRVEAVPAPLGRPFAPDALADVV 488
Query: 729 STLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHL 788
+ +A S D D +L AC SI GD L +E +++E L
Sbjct: 489 ADVA---------SGDDTDPRDE--------LLKDLACHPSIKAGDDLTDDEAARLVERL 531
Query: 789 ADLNSPWNCPHGRPTMRHLVDLTTIR 814
+P+ CPHGRPT+ + + T +R
Sbjct: 532 GSCETPYTCPHGRPTVLSIDEKTFVR 557
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 42/65 (64%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR ++ +I AG+V+ +S V ELVEN+LDAGA ++EI + G + +V D+G G
Sbjct: 2 IRRLDPETRSKIAAGEVVARPASVVVELVENALDAGAQTVEIEVDGDGTDRLRVADDGRG 61
Query: 72 ISPNN 76
++ ++
Sbjct: 62 MAESD 66
>gi|168186344|ref|ZP_02620979.1| DNA mismatch repair protein hexb [Clostridium botulinum C str.
Eklund]
gi|169295821|gb|EDS77954.1| DNA mismatch repair protein hexb [Clostridium botulinum C str.
Eklund]
Length = 647
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 98/201 (48%), Gaps = 29/201 (14%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLS---QSTVLNQQPLLRPLKL 670
F R+ ++GQFN +I+ + +++DQHAA EK FE+ ++ + Q LL P+ +
Sbjct: 456 FPRLNILGQFNKTYILAESSDTFYMIDQHAAHEKILFEKFKNQIENREVVSQILLTPVII 515
Query: 671 DLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIST 730
++ E+ V S +++I ++GF E + +R + G + KD
Sbjct: 516 EMNAEDFVYYSENINIFHESGFVTEIFGDNIINIR--------EAPMLLGKVNTKDFFLE 567
Query: 731 LAD---NQGECSIISSYKMDTADSVCPSRVRA-MLASRACRSSIMIGDALGRNEMQKILE 786
+ D N G +I ++V+ M+AS AC+++I L EM ++E
Sbjct: 568 ILDDIKNMGNGNI--------------AKVKHNMIASLACKAAIKANHTLSYEEMNSLVE 613
Query: 787 HLADLNSPWNCPHGRPTMRHL 807
L + P+NCPHGRPT+ L
Sbjct: 614 DLRYIEEPFNCPHGRPTIIKL 634
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
Query: 21 HRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFKVR 80
++I AG+V++ +S VKELVENS+DA A +I I +KE G+E ++ D+G GI P++ V
Sbjct: 13 NKIAAGEVVERPASVVKELVENSIDANAKNITIEVKESGKESIKISDDGIGIHPDD--VE 70
Query: 81 AVFLCQAYALIAKGVRFVCTNTTG 104
F+ + I+ NT G
Sbjct: 71 KAFMPHGTSKISLIEDLYSINTFG 94
Score = 47.0 bits (110), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 70/147 (47%), Gaps = 9/147 (6%)
Query: 112 LKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFL--SKPGQGSGRNLGDRQY 169
L T SS +K+ I +++G NIY + SD V G++ S+ +GS N Q
Sbjct: 197 LMTYASSDVKNTIRSIYGKNIYENIISFE-EHSDIVSVYGYIGNSEISRGSRNN----QS 251
Query: 170 FFVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDE 228
FVN R + ++ V +K ++ ++P ++ + DVNV P K +V F DE
Sbjct: 252 IFVNKRYIKSGTITAAVENAFKSFSTVNKFPFFVLFVDIYPEFIDVNVHPTKSEVKFQDE 311
Query: 229 CSILHALREGLQEIYSPN-NASYSVNK 254
I + + + S + S+++NK
Sbjct: 312 RIIYKVVFDAVHSALSTSIKDSFNINK 338
>gi|373453196|ref|ZP_09545092.1| DNA mismatch repair protein MutL [Eubacterium sp. 3_1_31]
gi|371964035|gb|EHO81573.1| DNA mismatch repair protein MutL [Eubacterium sp. 3_1_31]
Length = 692
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 108/202 (53%), Gaps = 29/202 (14%)
Query: 610 RKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQ---QPLLR 666
R +++VIGQF+ +II + ++ L+I+DQHAA E+Y++E + +S + Q QPLL
Sbjct: 498 RNPSLPQLRVIGQFHNCYIIAEGEKGLYIIDQHAAQERYHYEVIRESILAGQNDAQPLLL 557
Query: 667 PLKLDLTPEEEVVASMHMD----IIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVE 722
P+ T E V A M ++ ++ + G LE F K + +++ ++
Sbjct: 558 PI----TIEASVSAIMQLEDLNKVMEQLGIHLES---------FGEKTL-VCRELPVWMK 603
Query: 723 DVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQ 782
DV++ + L D +I ++ D A S+ R A +A+ AC SSI +L EM
Sbjct: 604 DVEE-AAFLQD------MIDIWERDKALSLEKLRKHA-IATMACHSSIRFNRSLTMEEMN 655
Query: 783 KILEHLADLNSPWNCPHGRPTM 804
+++E L P++CPHGRPT+
Sbjct: 656 RVIEDLGKCEQPFHCPHGRPTL 677
Score = 47.0 bits (110), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 82/169 (48%), Gaps = 23/169 (13%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICK 143
+ Q +AL + FV ++ G+ V KT+G+ SL + ++ ++G + + +A+
Sbjct: 172 VVQKFALSHPEIGFVLSHD-GRTV----FKTRGNGSLLEVLMQIYGRD--SAKTAIALDG 224
Query: 144 SD-SCKVEGFLSKPGQGSGRNLGDRQY--FFVNDRPVDLPKVSKLVNELYKGANSRQ-YP 199
+D + GF+ +P N + Y ++N R + + K V + Y ++ YP
Sbjct: 225 NDMDYHIGGFIMQPN----FNRATKYYMLLYINGRMIRNYHLQKAVMDAYAPYLPKERYP 280
Query: 200 IAIMNFIVPTRACDVNVTPDKRKVFFSDEC--------SILHALREGLQ 240
IAI+N + + DVNV P K ++ S E +I +AL+E LQ
Sbjct: 281 IAIINMEMDAQLVDVNVHPSKWEIRLSKEKQLEKLVYETISNALKEHLQ 329
Score = 43.9 bits (102), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 23 ICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGI 72
I AG+V++ VKELVEN +DA A+ +EI + + G + ++D+G G+
Sbjct: 15 IAAGEVVERPMGIVKELVENCIDASASHVEIQILQGGIDTITIIDDGIGM 64
>gi|373106357|ref|ZP_09520660.1| DNA mismatch repair protein MutL [Stomatobaculum longum]
gi|371652732|gb|EHO18140.1| DNA mismatch repair protein MutL [Stomatobaculum longum]
Length = 651
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 103/207 (49%), Gaps = 23/207 (11%)
Query: 608 LFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERL---SQSTVLNQQPL 664
LFR E+ ++++G + I + ++++DQHAA EK N+ERL + ++ Q L
Sbjct: 453 LFRPEERQHLRLVGAVFDTYWIAERGNSMYLIDQHAAHEKVNYERLLRDYRQQAVSAQRL 512
Query: 665 LRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDV 724
PL L L+ EE + + + K GFS+E G + ++AVP E +
Sbjct: 513 EPPLLLTLSAEEAALLTEQHECFEKIGFSIEH----FGGSSYAVRAVPDILPSVLKEELL 568
Query: 725 KDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKI 784
K + ++L Q AD V P + AS +C+++I + + E + +
Sbjct: 569 KTMFASLLAGQ------------RADDV-PLLIIEKTASMSCKAAIKGNQHISQREAEAL 615
Query: 785 LEHLADLNSPWNCPHGRPTMRHLVDLT 811
L+ L L +P+NCPHGRPT +++LT
Sbjct: 616 LDELFALENPYNCPHGRPT---IIELT 639
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 64/133 (48%), Gaps = 8/133 (6%)
Query: 112 LKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSG-RNLGDRQYF 170
T G+ +KD I ++G I L PV + V GF+ +P G R L +++
Sbjct: 196 FHTSGNREVKDIIYQLYGREIATKLLPVE-REEKGLSVHGFIGRPEISRGSRAL---EHY 251
Query: 171 FVNDRPVDLPKVSKLVNELYKGANSRQ--YPIAIMNFIVPTRACDVNVTPDKRKVFFSDE 228
+N R + P +SK + + Y G Q +P A++ DVNV P KR+V FSD
Sbjct: 252 CINGRYIKSPLLSKAIEDGY-GDRMMQHNFPFAVLFLTTKPEVVDVNVHPTKREVRFSDG 310
Query: 229 CSILHALREGLQE 241
++ LR ++E
Sbjct: 311 QALYLFLRAAVEE 323
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 52/81 (64%), Gaps = 2/81 (2%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
+I+ +++ +++I AG+VI+ +S VKEL EN++DA A+ I I +++ G +V DNG
Sbjct: 2 SIQLLDESTINKIAAGEVIERPASIVKELAENAIDADASVITIEIRDGGIAMIRVTDNGS 61
Query: 71 GISPNNFKVRAVFLCQAYALI 91
GI+ + +V FL A + I
Sbjct: 62 GIAAD--EVPTAFLRHATSKI 80
>gi|1061424|gb|AAA97459.1| hPMSR3 [Homo sapiens]
Length = 264
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 57/74 (77%)
Query: 5 TPTNSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQ 64
+P + I+PI++ VH+IC+G V+ LS+AVKELVENSLDAGAT+I++ LK+YG + +
Sbjct: 179 SPEPAKAIKPIDRKSVHQICSGPVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIE 238
Query: 65 VVDNGCGISPNNFK 78
V DNGCG+ NF+
Sbjct: 239 VSDNGCGVEEENFE 252
>gi|154483534|ref|ZP_02025982.1| hypothetical protein EUBVEN_01238 [Eubacterium ventriosum ATCC
27560]
gi|149735444|gb|EDM51330.1| DNA mismatch repair domain protein [Eubacterium ventriosum ATCC
27560]
Length = 687
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 116/233 (49%), Gaps = 36/233 (15%)
Query: 584 ELSQPEN--EERKARALAAATTELERLFRKEDF------GRMKVIGQFNLGFIIGKLDQD 635
E+ +PEN EE+K++ + EL ++ +DF +++GQ + I + D
Sbjct: 463 EIKEPENIKEEKKSKPIQQ---ELSGVY--DDFLTNVARPSHRLVGQVFETYWIVEYDGK 517
Query: 636 LFIVDQHAADEKYNFE----RLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNG 691
++I+DQHAA EK FE RLS+ V + Q + P+ L+L+ E + + +MD ++ G
Sbjct: 518 MYIIDQHAAHEKVMFEKLMDRLSKKEV-SSQMINPPIILNLSLNEANLINKYMDNFKEIG 576
Query: 692 FSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADS 751
F +E A G F ++AVP + + +I L++ G
Sbjct: 577 FEIE----AFGGQDFAVRAVPADLYTLDSYDVLMQIIDNLSNENGR-------------- 618
Query: 752 VCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTM 804
+ P + +AS +C++++ + + E +++ L L +P+NCPHGRPT+
Sbjct: 619 MVPDMITEKIASMSCKAAVKGNNKMSTQEANALIDQLLSLENPYNCPHGRPTI 671
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 56/93 (60%), Gaps = 2/93 (2%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I +++ +++I AG+VI +S VKEL+EN++DAGAT I + +K+ G ++ DNG G
Sbjct: 4 IHVLDQNTINQIAAGEVIDRPASIVKELMENAIDAGATMISVEIKDGGTSLIRITDNGSG 63
Query: 72 ISPNNFKVRAVFLCQAYALIAKGVRFVCTNTTG 104
I ++ KV FL A + I + + ++ G
Sbjct: 64 IEKDDIKV--AFLRHATSKIKTALDLISVSSLG 94
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 64/134 (47%), Gaps = 15/134 (11%)
Query: 95 VRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLS 154
+ F+ N T + T G+ +LKD I ++G +I N L + C ++ K+ G++
Sbjct: 187 ISFINNNQTK-------IHTSGNGNLKDVIYNIYGRDIANNLLEIN-CSNEFIKMTGYIG 238
Query: 155 KPGQGSGRNLGDRQY--FFVNDRPVDLPKVSKLVNELYKGA-NSRQYPIAIMNFIVPTRA 211
K G +R + +F+N R + +SK + + YK +YP +NF +
Sbjct: 239 KAIISKG----NRSFENYFINGRYIKNNIISKAIEDGYKFILMQHKYPFTAINFEIDQDL 294
Query: 212 CDVNVTPDKRKVFF 225
DVNV P K ++ F
Sbjct: 295 LDVNVHPAKMELRF 308
>gi|313104156|sp|Q13401.2|PM2P3_HUMAN RecName: Full=Putative postmeiotic segregation increased 2-like
protein 3; AltName: Full=PMS2-related protein 3;
AltName: Full=Postmeiotic segregation increased 2-like
protein 9; AltName: Full=Postmeiotic segregation
increased protein 5; AltName: Full=Putative postmeiotic
segregation increased 2 pseudogene 3
gi|119592171|gb|EAW71765.1| postmeiotic segregation increased 2-like 3, isoform CRA_a [Homo
sapiens]
Length = 168
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 57/74 (77%)
Query: 5 TPTNSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQ 64
+P + I+PI++ VH+IC+G V+ LS+AVKELVENSLDAGAT+I++ LK+YG + +
Sbjct: 83 SPEPAKAIKPIDRKSVHQICSGPVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIE 142
Query: 65 VVDNGCGISPNNFK 78
V DNGCG+ NF+
Sbjct: 143 VSDNGCGVEEENFE 156
>gi|302874907|ref|YP_003843540.1| DNA mismatch repair protein MutL [Clostridium cellulovorans 743B]
gi|307690473|ref|ZP_07632919.1| DNA mismatch repair protein MutL [Clostridium cellulovorans 743B]
gi|302577764|gb|ADL51776.1| DNA mismatch repair protein MutL [Clostridium cellulovorans 743B]
Length = 658
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 102/196 (52%), Gaps = 21/196 (10%)
Query: 612 EDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQ---QPLLRPL 668
E F M++IGQ++ +I+ + L++VDQHAA EK FE+ + L++ Q L+ P
Sbjct: 465 EKFPMMRIIGQYSNTYILMEGYDGLYLVDQHAAHEKIIFEKYIKEMKLSKVVSQILMLPE 524
Query: 669 KLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLI 728
+++TP + + + ++ K GF +E+ +R VP + G VK+L
Sbjct: 525 VIEMTPYDFSIYKENHEMFTKAGFLIEDFGENTVSVR----EVP----VFLGRPVVKELF 576
Query: 729 STLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHL 788
+ + DN + +Y + V ++ A+ AC+S+I D L EM ++E L
Sbjct: 577 TNILDN------LKNYGSGSTLEVKYYKI----ATLACKSAIKANDNLDIREMIALIEEL 626
Query: 789 ADLNSPWNCPHGRPTM 804
++ P+NCPHGRPT+
Sbjct: 627 RFIDEPFNCPHGRPTI 642
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 45/71 (63%), Gaps = 2/71 (2%)
Query: 21 HRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFKVR 80
++I AG+V++ S VKE++ENS+D+GAT I I + + GE ++ D+G GI P + V
Sbjct: 13 NKIAAGEVVERPLSVVKEMMENSIDSGATKITIEILDGGETLIRITDDGSGIHPED--VE 70
Query: 81 AVFLCQAYALI 91
FL A + I
Sbjct: 71 KAFLPHATSKI 81
Score = 42.7 bits (99), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 60/135 (44%), Gaps = 8/135 (5%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFL--SKPGQGSGRNLGDRQ 168
VL T G+ L D I ++G N+ L D + G++ S+ +GS N Q
Sbjct: 196 VLTTFGTGQLTDTIRNIYGKNVVENLSFFE-GHGDIVSIYGYIGNSELSRGSRNN----Q 250
Query: 169 YFFVNDRPVDLPKVSKLV-NELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSD 227
FVN+R + ++ V N + +YP I+ + DVNV P K ++ F D
Sbjct: 251 SIFVNNRFIKNKLIATAVENAVKSFFMVNKYPFFIIFLDIYPEFLDVNVHPTKAEIKFQD 310
Query: 228 ECSILHALREGLQEI 242
E I + + + ++
Sbjct: 311 ESRIFKIVFDTIHKV 325
>gi|75516614|gb|AAI01599.1| Postmeiotic segregation increased 2-like 3 [Homo sapiens]
gi|119592172|gb|EAW71766.1| postmeiotic segregation increased 2-like 3, isoform CRA_b [Homo
sapiens]
Length = 169
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 57/74 (77%)
Query: 5 TPTNSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQ 64
+P + I+PI++ VH+IC+G V+ LS+AVKELVENSLDAGAT+I++ LK+YG + +
Sbjct: 83 SPEPAKAIKPIDRKSVHQICSGPVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIE 142
Query: 65 VVDNGCGISPNNFK 78
V DNGCG+ NF+
Sbjct: 143 VSDNGCGVEEENFE 156
>gi|422325708|ref|ZP_16406736.1| DNA mismatch repair protein MutL [Erysipelotrichaceae bacterium
6_1_45]
gi|371667456|gb|EHO32581.1| DNA mismatch repair protein MutL [Erysipelotrichaceae bacterium
6_1_45]
Length = 695
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 101/193 (52%), Gaps = 23/193 (11%)
Query: 616 RMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPE 675
+++VIGQF+ +I+ + ++ L+I+DQHAA E+Y++E + + +L+ +PL L +T E
Sbjct: 507 QLRVIGQFHSCYILAEGEKGLYIIDQHAAQERYHYE-IIRKQILDGNNDTQPLLLPITIE 565
Query: 676 EEVVASMHMD----IIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTL 731
+ A D ++ + G LE F + +P K VE+ L
Sbjct: 566 STISAVSQADDLNALLEQLGIHLE----VFGDHTFVCRQLPLWMK---DVEEEAFL---- 614
Query: 732 ADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADL 791
C +I ++ D S+ R A +A+ AC SSI +L +EM++++E LA
Sbjct: 615 ------CDMIDIWEKDKEISLDKLRKHA-IATMACHSSIRFNRSLTLDEMKRVIEDLAHC 667
Query: 792 NSPWNCPHGRPTM 804
P++CPHGRPTM
Sbjct: 668 EQPFHCPHGRPTM 680
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 82/166 (49%), Gaps = 19/166 (11%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICK 143
+ Q +AL + F C + G+ V KT+GS +L + ++ ++G + + +++
Sbjct: 172 VVQKFALSHPEIGF-CLSHDGRTV----FKTKGSGNLLEVLMQIYGRD--SAKSAISLDG 224
Query: 144 SDS-CKVEGFLSKPGQGSGRNLGDRQY--FFVNDRPVDLPKVSKLVNELYKGANSR-QYP 199
SD K++G++ +P N + Y ++NDR + + K + + Y + +YP
Sbjct: 225 SDQDYKIKGYIMQPQ----FNRATKYYMLLYINDRMIRNYHLQKAILDAYSPYMPKDRYP 280
Query: 200 IAIMNFIVPTRACDVNVTPDKRKVFFSDECS----ILHALREGLQE 241
I +++ ++ + DVNV P K ++ S E + +R+ LQE
Sbjct: 281 IVVIDLLMDAQLVDVNVHPSKWEIRLSKEKQLEKLLYETIRKALQE 326
Score = 47.0 bits (110), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 41/65 (63%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I +++ + + I AG+V++ VKELVEN +DA A++IEI + + G ++D+G G
Sbjct: 4 INRLDEHLSNMIAAGEVVERPQGIVKELVENCIDAHASNIEIQISQGGIATITIIDDGDG 63
Query: 72 ISPNN 76
+ P +
Sbjct: 64 MDPED 68
>gi|346314848|ref|ZP_08856365.1| hypothetical protein HMPREF9022_02022 [Erysipelotrichaceae
bacterium 2_2_44A]
gi|345905786|gb|EGX75523.1| hypothetical protein HMPREF9022_02022 [Erysipelotrichaceae
bacterium 2_2_44A]
Length = 695
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 101/193 (52%), Gaps = 23/193 (11%)
Query: 616 RMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPE 675
+++VIGQF+ +I+ + ++ L+I+DQHAA E+Y++E + + +L+ +PL L +T E
Sbjct: 507 QLRVIGQFHSCYILAEGEKGLYIIDQHAAQERYHYE-IIRKQILDGNNDTQPLLLPITIE 565
Query: 676 EEVVASMHMD----IIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTL 731
+ A D ++ + G LE F + +P K VE+ L
Sbjct: 566 STISAVSQADDLNALLEQLGIHLE----VFGDHTFVCRQLPLWMK---DVEEEAFL---- 614
Query: 732 ADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADL 791
C +I ++ D S+ R A +A+ AC SSI +L +EM++++E LA
Sbjct: 615 ------CDMIDIWEKDKEISLDKLRKHA-IATMACHSSIRFNRSLTLDEMKRVIEDLAHC 667
Query: 792 NSPWNCPHGRPTM 804
P++CPHGRPTM
Sbjct: 668 EQPFHCPHGRPTM 680
Score = 47.8 bits (112), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 81/166 (48%), Gaps = 19/166 (11%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICK 143
+ Q +AL + F C + G+ V KT+GS +L + ++ ++G + + +++
Sbjct: 172 VVQKFALSHPEIGF-CLSHDGRTV----FKTKGSGNLLEVLMQIYGRD--SAKSAISLDG 224
Query: 144 SDS-CKVEGFLSKPGQGSGRNLGDRQY--FFVNDRPVDLPKVSKLVNELYKGANSR-QYP 199
SD K++G++ +P N + Y ++N R + + K + + Y + +YP
Sbjct: 225 SDQDYKIKGYIMQPQ----FNRATKYYMLLYINGRMIRNYHLQKAILDAYSPYMPKDRYP 280
Query: 200 IAIMNFIVPTRACDVNVTPDKRKVFFSDECS----ILHALREGLQE 241
I +++ ++ + DVNV P K ++ S E + +R+ LQE
Sbjct: 281 IVVIDLLMDAQLVDVNVHPSKWEIRLSKEKQLEKLLYETIRKALQE 326
Score = 47.0 bits (110), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 41/65 (63%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I +++ + + I AG+V++ VKELVEN +DA A++IEI + + G ++D+G G
Sbjct: 4 INRLDEHLSNMIAAGEVVERPQGIVKELVENCIDAHASNIEIQISQGGIATITIIDDGDG 63
Query: 72 ISPNN 76
+ P +
Sbjct: 64 MDPED 68
>gi|1304120|dbj|BAA07510.1| PMS5 [Homo sapiens]
gi|1407578|dbj|BAA07472.1| hPMS5 [Homo sapiens]
Length = 186
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 54/67 (80%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+PI++ VH+IC+G V+ LS+AVKELVENSLDAGAT+I++ LK+YG + +V DNGCG
Sbjct: 9 IKPIDRKSVHQICSGPVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSDNGCG 68
Query: 72 ISPNNFK 78
+ NF+
Sbjct: 69 VEEENFE 75
>gi|313900881|ref|ZP_07834371.1| DNA mismatch repair protein, C-terminal domain protein [Clostridium
sp. HGF2]
gi|312954301|gb|EFR35979.1| DNA mismatch repair protein, C-terminal domain protein [Clostridium
sp. HGF2]
Length = 695
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 101/193 (52%), Gaps = 23/193 (11%)
Query: 616 RMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPE 675
+++VIGQF+ +I+ + ++ L+I+DQHAA E+Y++E + + +L+ +PL L +T E
Sbjct: 507 QLRVIGQFHSCYILAEGEKGLYIIDQHAAQERYHYE-IIRKQILDGNNDTQPLLLPITIE 565
Query: 676 EEVVASMHMD----IIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTL 731
+ A D ++ + G LE F + +P K VE+ L
Sbjct: 566 STISAVSQADDLNALLEQLGIHLE----VFGDHTFVCRQLPLWMK---DVEEEAFL---- 614
Query: 732 ADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADL 791
C +I ++ D S+ R A +A+ AC SSI +L +EM++++E LA
Sbjct: 615 ------CDMIDIWEKDKEISLDKLRKHA-IATMACHSSIRFNRSLTLDEMKRVIEDLAHC 667
Query: 792 NSPWNCPHGRPTM 804
P++CPHGRPTM
Sbjct: 668 EQPFHCPHGRPTM 680
Score = 47.8 bits (112), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 81/166 (48%), Gaps = 19/166 (11%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICK 143
+ Q +AL + F C + G+ V KT+GS +L + ++ ++G + + +++
Sbjct: 172 VVQKFALSHPEIGF-CLSHDGRTV----FKTKGSGNLLEVLMQIYGRD--SAKSAISLDG 224
Query: 144 SDS-CKVEGFLSKPGQGSGRNLGDRQY--FFVNDRPVDLPKVSKLVNELYKGANSR-QYP 199
SD K++G++ +P N + Y ++N R + + K + + Y + +YP
Sbjct: 225 SDQDYKIKGYIMQPQ----FNRATKYYMLLYINGRMIRNYHLQKAILDAYSPYMPKDRYP 280
Query: 200 IAIMNFIVPTRACDVNVTPDKRKVFFSDECS----ILHALREGLQE 241
I +++ ++ + DVNV P K ++ S E + +R+ LQE
Sbjct: 281 IVVIDLLMDAQLVDVNVHPSKWEIRLSKEKQLEKLLYETIRKALQE 326
Score = 47.0 bits (110), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 41/65 (63%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I +++ + + I AG+V++ VKELVEN +DA A++IEI + + G ++D+G G
Sbjct: 4 INRLDEHLSNMIAAGEVVERPQGIVKELVENCIDAHASNIEIQISQGGIATITIIDDGDG 63
Query: 72 ISPNN 76
+ P +
Sbjct: 64 MDPED 68
>gi|219848834|ref|YP_002463267.1| DNA mismatch repair protein MutL [Chloroflexus aggregans DSM 9485]
gi|219543093|gb|ACL24831.1| DNA mismatch repair protein MutL [Chloroflexus aggregans DSM 9485]
Length = 612
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 97/192 (50%), Gaps = 24/192 (12%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERL----SQSTVLNQQPLLRPLKLDL 672
++V+GQ L +I+ + + ++++DQHAA E+ +E+L +Q V +QQ LL P ++L
Sbjct: 425 LRVVGQVGLTYIVAEAPEGMYLIDQHAAHERITYEKLMNQYAQRAVESQQ-LLIPQAVEL 483
Query: 673 TPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLA 732
+PE + + + + + GF+LE G ++A+P + + + ++ LA
Sbjct: 484 SPEASTLLVGNAEKLAEWGFALEP-----WGTGVLVRAIPATLPPDELTQALHEVAERLA 538
Query: 733 DNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLN 792
G + ++ AML + AC +S+ G L +EM+ +L L
Sbjct: 539 GRGGSSPL--EWR------------EAMLITLACHTSVRAGQPLSHDEMRHLLRQLEQCV 584
Query: 793 SPWNCPHGRPTM 804
SP CPHGRPTM
Sbjct: 585 SPRTCPHGRPTM 596
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 42/62 (67%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR +++ + +I AG+V++ +S KELVEN+LDAGA I + ++ G +V D+GCG
Sbjct: 3 IRLLDETIAAQIAAGEVVERPASVAKELVENALDAGARRIVVEVRGGGLREIRVQDDGCG 62
Query: 72 IS 73
IS
Sbjct: 63 IS 64
>gi|443684700|gb|ELT88557.1| hypothetical protein CAPTEDRAFT_17706, partial [Capitella teleta]
Length = 276
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/64 (60%), Positives = 53/64 (82%)
Query: 15 INKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISP 74
IN+G VHRIC+GQV+ L++AVKELVENS+DAGATS+E+ LK++G + +VVDNG G+
Sbjct: 15 INRGDVHRICSGQVVLTLATAVKELVENSIDAGATSVEVKLKDHGVDSVEVVDNGSGVES 74
Query: 75 NNFK 78
NF+
Sbjct: 75 ANFQ 78
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 47/95 (49%), Gaps = 18/95 (18%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCL--- 136
R + + AY LI+ GVR CT+ T K K+VVL TQ SSS +DNI +VFG L
Sbjct: 180 RMLHVLSAYCLISVGVRISCTHVTSKGKKNVVLATQSSSSFRDNITSVFGFKQMQSLVEF 239
Query: 137 ----------EPVAICKSDSC-----KVEGFLSKP 156
E + DS K+ GF+S+P
Sbjct: 240 EQVQAEDATYEEFGLSPEDSAASVPFKITGFVSRP 274
>gi|390453603|ref|ZP_10239131.1| DNA mismatch repair protein mutL [Paenibacillus peoriae KCTC 3763]
Length = 739
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 117/271 (43%), Gaps = 35/271 (12%)
Query: 538 LDICSTLQFSIQDLRKRRQQRLSIMQSSCHTSGSVKMRRCFAAATLELSQPENEERKARA 597
+D S ++Q+ R S+ S+ G+V R FA +P A
Sbjct: 484 VDTTSVYSGAVQETAASATYRSSVTPSA----GNVADSRYFAG-----EKPRQPRLNAEQ 534
Query: 598 LAAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYN----FERL 653
LAA + E L F + +IGQ + ++I + DQ L+++DQHAA E+ N +E+
Sbjct: 535 LAAVSGEAPEL---PAFPELNLIGQHHGTYLIAQNDQGLYLIDQHAAHERVNYEFYYEKF 591
Query: 654 SQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPF 713
++Q+ LL P+ LD TP E + + G LE G FR+ + P+
Sbjct: 592 GNPESVSQE-LLLPITLDFTPSETEKLKTRLHWFEQAGVYLEH----FGGQTFRVSSYPY 646
Query: 714 SKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIG 773
+ G E D+I +A E I K+ A S+ S CR+SI
Sbjct: 647 --WLPKGEE--ADVIEEMAGWVLEEKAIDLAKLREAASIMCS----------CRASIKAN 692
Query: 774 DALGRNEMQKILEHLADLNSPWNCPHGRPTM 804
L + +LE LA P+ CPHGRP +
Sbjct: 693 QKLTDRQAVVLLERLAACKQPYTCPHGRPIV 723
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 54/83 (65%), Gaps = 2/83 (2%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR +++ + ++I AG+V++ SS VKELVEN++DAG T ++++++E G + +V DNG G
Sbjct: 4 IRVLDEHIANQIAAGEVVERPSSVVKELVENAIDAGGTRVDVSVEEGGLQSIRVTDNGSG 63
Query: 72 ISPNNFKVRAVFLCQAYALIAKG 94
I P + V F A + I G
Sbjct: 64 IEPED--VETAFYRHATSKIGHG 84
>gi|255525227|ref|ZP_05392169.1| DNA mismatch repair protein MutL [Clostridium carboxidivorans P7]
gi|296188727|ref|ZP_06857114.1| DNA mismatch repair protein [Clostridium carboxidivorans P7]
gi|255511090|gb|EET87388.1| DNA mismatch repair protein MutL [Clostridium carboxidivorans P7]
gi|296046654|gb|EFG86101.1| DNA mismatch repair protein [Clostridium carboxidivorans P7]
Length = 633
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 95/199 (47%), Gaps = 31/199 (15%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQ---QPLLRPLKL 670
F ++ VIGQF+ +I+ + L+++DQHAA EK FE+ S N Q L+ P+ +
Sbjct: 442 FPKLNVIGQFHNTYILAQYGDTLYLIDQHAAHEKILFEKYKNSIKENDVIAQILITPVII 501
Query: 671 DLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIST 730
+L E+ + + + +I K GF++E ++ VP + G DVK+L
Sbjct: 502 ELYHEDFLYYTDNKEIFSKAGFNIE----IFGDNTISIREVP----LILGKPDVKNLFMD 553
Query: 731 LADN-----QGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKIL 785
+ +N GE I +A AC+++I D L EM ++
Sbjct: 554 ILENLKNMGSGETWTIK---------------YNAIAKLACKAAIKANDNLSNIEMDALV 598
Query: 786 EHLADLNSPWNCPHGRPTM 804
E L + P+NCPHGRPT+
Sbjct: 599 EDLRFIEDPFNCPHGRPTI 617
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 21 HRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFKVR 80
++I AG+V++ S VKELVENS+D+GA +I + + G++ +V+D+G GI ++ +
Sbjct: 13 NKIAAGEVVERPFSVVKELVENSIDSGAKNITVETIDGGQKSIKVLDDGDGIHADD--IE 70
Query: 81 AVFLCQAYALIAKGVRFVCTNTTG 104
VF+ A + I NT G
Sbjct: 71 KVFMPHATSKIKNIEDVYSINTMG 94
>gi|334128877|ref|ZP_08502755.1| DNA mismatch repair protein MutL [Centipeda periodontii DSM 2778]
gi|333386119|gb|EGK57339.1| DNA mismatch repair protein MutL [Centipeda periodontii DSM 2778]
Length = 627
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 108/223 (48%), Gaps = 27/223 (12%)
Query: 585 LSQPENEERKARALAAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAA 644
++ +EER A L AA + E E G + IGQ +L +II + Q L+IVDQHAA
Sbjct: 410 VAAARSEERTA--LVAAASAQEEGIEME--GNLLPIGQVDLTYIIAQSAQSLYIVDQHAA 465
Query: 645 DEKYNFERLS-QSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAG 703
E+ F+R S Q+ + Q +L L E + ++ + GF LE AG
Sbjct: 466 HERILFDRFSAQADGIPSQQMLVHAILSFDAREAQYIDENAELFDRLGFHLES-----AG 520
Query: 704 LR-FRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVR-AML 761
R +RL VP + +++++ +L D + P+ +R A +
Sbjct: 521 ERTYRLTEVPADIPTDEAEDIIREILISLGDLH---------------AATPANLRQAGI 565
Query: 762 ASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTM 804
A+ ACR++I G+ L +M+ +LE L P+ CPHGRPT+
Sbjct: 566 ATMACRAAIKAGEELNVRQMEILLEELRATPFPFTCPHGRPTI 608
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 69/132 (52%), Gaps = 4/132 (3%)
Query: 106 NVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDS-CKVEGFLSKPGQGSGRNL 164
N + + T G SL+ I +++G ++ L P+ SD+ ++ G++SKP R+
Sbjct: 191 NNNRLTILTAGDDSLRHAIESIYGGDVAGALIPLDFNDSDAEIRITGYISKPS--VVRSS 248
Query: 165 GDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQ-YPIAIMNFIVPTRACDVNVTPDKRKV 223
Q + VN R + ++K ++ +Y+ + +P+A++ VP R DVNV P K ++
Sbjct: 249 RAWQTYIVNGRTIQNRAIAKAIDNVYRALVPKMGFPLAVLCIEVPQRTIDVNVHPQKIEM 308
Query: 224 FFSDECSILHAL 235
F DE I A+
Sbjct: 309 KFEDEGRIFKAV 320
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 44/62 (70%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I ++ +++I AG+V++ +S VKELVEN++DAGAT+IEI + G + +V DNG G
Sbjct: 4 IHVLDDTTINKIAAGEVVERPASVVKELVENAMDAGATAIEIEIVGGGVSFIRVTDNGRG 63
Query: 72 IS 73
++
Sbjct: 64 MT 65
>gi|1304123|dbj|BAA07512.1| PMS6 [Homo sapiens]
gi|1407579|dbj|BAA07473.1| hPMS6 [Homo sapiens]
Length = 159
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/67 (58%), Positives = 54/67 (80%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+PI++ VH+IC+G V+ LS+AVKELVENSLDAGAT+I++ LK+YG + +V DNGCG
Sbjct: 20 IKPIDRKSVHQICSGPVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSDNGCG 79
Query: 72 ISPNNFK 78
+ NF+
Sbjct: 80 VEEENFE 86
>gi|323448291|gb|EGB04191.1| hypothetical protein AURANDRAFT_72554 [Aureococcus anophagefferens]
Length = 649
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 97/198 (48%), Gaps = 23/198 (11%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNV-KSVVLKTQGSSSLKDNIITVFGMNIYNCLEP 138
RA+ QA+AL+A G R T +G + + Q SL+++ +FG LE
Sbjct: 195 RALRTVQAHALVAVGCRLRLTLVSGGGATRRTAIAVQAPRSLRESASALFGHAFARSLEE 254
Query: 139 VAI----CKSDSCKVEGFLSKPG----QGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELY 190
V+ + S V G +S+ G G GDRQ+ FVN RP+D P+VS+ + +++
Sbjct: 255 VSFDLRGGEDCSLAVIGLMSRAGGFDAPGPRGGGGDRQFLFVNGRPIDAPRVSRCIGDVW 314
Query: 191 KG--ANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECS------------ILHALR 236
+ + R P +++ VP A DVNV+PDKR V DE ++ ALR
Sbjct: 315 RSVEGDRRGRPAFVLDIRVPPSAVDVNVSPDKRDVVLDDETGRGAVPLPATSNLLVAALR 374
Query: 237 EGLQEIYSPNNASYSVNK 254
L +++ P+ S++ +
Sbjct: 375 IALHDLWEPSRGSFAGGR 392
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 58/95 (61%)
Query: 611 KEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKL 670
K DF M+ +GQFNLGF++ +L LF+VDQHAADEK+ +E L + T ++ QPLL PL L
Sbjct: 522 KADFSAMEALGQFNLGFLVCRLGDHLFLVDQHAADEKFRYEALWRDTRVDTQPLLAPLSL 581
Query: 671 DLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLR 705
DL EE+ + + GF L + A G R
Sbjct: 582 DLGATEELALLERRCTVERVGFRLAVNDLAPPGRR 616
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALK-EYGEEWFQVVDNGC 70
I I+ ++ +GQV+ DL+ AVKEL+EN+LDAGATSIE+ + + G + DNG
Sbjct: 5 IAKIDTASARKLSSGQVVVDLAGAVKELLENALDAGATSIELRINDDGGGAEIECADNGH 64
Query: 71 GIS 73
GI+
Sbjct: 65 GIA 67
>gi|291522252|emb|CBK80545.1| DNA mismatch repair protein MutL [Coprococcus catus GD/7]
Length = 698
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 103/204 (50%), Gaps = 21/204 (10%)
Query: 604 ELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQS---TVLN 660
E ERL ++ R ++IGQ + + + D LFI+DQHAA EK +E+L ++ L
Sbjct: 496 EDERLLDEKARARHRLIGQVFDTYWMVEYDGKLFIIDQHAAHEKVLYEKLMKAFSQKALQ 555
Query: 661 QQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFG 720
+Q L P+ L L+ +EE + + D + GF +E G + ++ VP FG
Sbjct: 556 KQMLSPPVILTLSMQEENIYKQYADYFAELGFEIE----LFGGREYAVRGVPLQ---LFG 608
Query: 721 VEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNE 780
+ + +D+ + D+ E S ++D S + +A+ AC++++ + L E
Sbjct: 609 M-NARDIFIEVLDSVTE----ESRRLDG------SAITDHIATMACKAAVKGNNKLSFKE 657
Query: 781 MQKILEHLADLNSPWNCPHGRPTM 804
++E L +P+ CPHGRPT+
Sbjct: 658 ADTLIEQLLQAKNPYTCPHGRPTI 681
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 56/94 (59%), Gaps = 2/94 (2%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
+I ++ +++I AG+V++ SS +KELVEN++DA A++I I +KE G +V DNG
Sbjct: 3 SIHLLDSDTINKIAAGEVVERPSSVIKELVENAIDAKASAITIEIKEGGIAMMRVTDNGG 62
Query: 71 GISPNNFKVRAVFLCQAYALIAKGVRFVCTNTTG 104
GI ++ ++ F+ A + I + + + G
Sbjct: 63 GIDRDD--IKTAFVRHATSKIETAMDLMTVGSLG 94
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 64/135 (47%), Gaps = 15/135 (11%)
Query: 112 LKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQY-- 169
L T G+ +L+D I ++G ++ L V + + C V GF+ KP + G+R +
Sbjct: 197 LHTSGNGNLRDIIYQIYGRDVTGQLLEVDV-QGKLCHVTGFIGKPI----LSRGNRSWEN 251
Query: 170 FFVNDRPVDLPKVSKLVNELYKG-ANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDE 228
+F+N R + ++K + + YK +YP + V DVNV P K ++ F+
Sbjct: 252 YFINGRYIKSNIITKAIEDAYKTFVMIHKYPFTAFHIEVDPALIDVNVHPRKMELRFNQN 311
Query: 229 CSILHALREGLQEIY 243
++ QEIY
Sbjct: 312 EAV-------YQEIY 319
>gi|347531826|ref|YP_004838589.1| DNA mismatch repair protein MutL [Roseburia hominis A2-183]
gi|345501974|gb|AEN96657.1| DNA mismatch repair protein MutL [Roseburia hominis A2-183]
Length = 706
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 99/193 (51%), Gaps = 23/193 (11%)
Query: 616 RMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQ----QPLLRPLKLD 671
R ++IG+ + + + + LFI+DQHAA EK +ER + + V Q Q L P+ L
Sbjct: 517 RHRIIGEVFDTYWLIEYEDKLFIIDQHAAHEKVLYER-TMARVRTQNFASQTLSPPIILT 575
Query: 672 LTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTL 731
L+ EE+ + + + + IR G+ +E G F + A+P F D+K + +
Sbjct: 576 LSAEEQEMLTRYGEQIRLFGYEVE----PFGGKEFAITAIPAD----FEAVDMKGMFLDM 627
Query: 732 ADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADL 791
D+ S P + +AS +C+++I GD++ R E +++++ L L
Sbjct: 628 LDDFTNIS----------GREAPELILEKVASMSCKAAIKGGDSISRAEAEQLIDELLSL 677
Query: 792 NSPWNCPHGRPTM 804
+P++CPHGRPT+
Sbjct: 678 ENPYHCPHGRPTI 690
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 72/136 (52%), Gaps = 8/136 (5%)
Query: 112 LKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQY-- 169
+ T G+S+ KD I ++G +I L PV +++ V+GF+ KP G +R Y
Sbjct: 197 MHTSGNSNEKDLIYHIYGRDITAALLPVC-AETEYFSVKGFVGKPMISRG----NRSYES 251
Query: 170 FFVNDRPVDLPKVSKLVNELYKG-ANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDE 228
+F+N R + +SK V E YKG QYP ++ F + T DVNV P K ++ FS+
Sbjct: 252 YFINGRYIKSALLSKAVEEAYKGFMMQHQYPFCVLYFTMDTELLDVNVHPTKMELRFSNN 311
Query: 229 CSILHALREGLQEIYS 244
+ L + ++++ +
Sbjct: 312 EEVYRKLYQTIRDVLT 327
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 57/95 (60%), Gaps = 2/95 (2%)
Query: 10 PTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNG 69
P I +++ + +I AG+V++ SS VKELVEN++DA AT++ + +KE G + ++ DNG
Sbjct: 2 PQITLLSQETIDKIAAGEVVERPSSVVKELVENAIDARATAVTVEIKEGGTTFVRITDNG 61
Query: 70 CGISPNNFKVRAVFLCQAYALIAKGVRFVCTNTTG 104
CGI +V FL + + I +C ++ G
Sbjct: 62 CGIERE--QVPLAFLRHSTSKIKSVEDLLCIHSLG 94
>gi|338814535|ref|ZP_08626549.1| DNA mismatch repair protein MutL [Acetonema longum DSM 6540]
gi|337273471|gb|EGO62094.1| DNA mismatch repair protein MutL [Acetonema longum DSM 6540]
Length = 593
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 98/193 (50%), Gaps = 21/193 (10%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLS-QSTVLNQQPLLRPLKLDLTPE 675
++ I Q +I+ + + L+++DQHAA E+ F+RLS Q+ + Q LL P L+ +
Sbjct: 408 LEAICQIESCYIVARGPEGLYLMDQHAAHERILFDRLSRQAGNVPTQQLLVPCVLEFDRQ 467
Query: 676 EEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQ 735
E + + +D ++ GF+LE+ + FRL +P + F D+ L+ + +
Sbjct: 468 ESLALTESLDCLKDLGFTLEQ----IGPQLFRLTEMP----VDFKESDIDGLLREILKS- 518
Query: 736 GECSIISSYKMDTADSVCPSRVRAMLAS-RACRSSIMIGDALGRNEMQKILEHLADLNSP 794
+T + P +R ACR+++ GDAL +MQ +L+ L + + P
Sbjct: 519 ----------TETMRNPAPHELRQTYYQIAACRAAVKAGDALNIRQMQALLDALMNTDLP 568
Query: 795 WNCPHGRPTMRHL 807
+ CPHGRPT+ H
Sbjct: 569 YTCPHGRPTILHF 581
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 48/65 (73%)
Query: 9 SPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDN 68
+P I+ + ++++I AG+V++ SS +KELVENS+DA A ++EI ++E G + +V D+
Sbjct: 3 TPVIKILEDELINQIAAGEVVERPSSVIKELVENSIDAQAKAVEIEIREGGIQLIRVTDD 62
Query: 69 GCGIS 73
GCG+S
Sbjct: 63 GCGMS 67
Score = 61.2 bits (147), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 66/138 (47%), Gaps = 6/138 (4%)
Query: 106 NVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQ-GSGRNL 164
N +VL T G+S L + I V+G + L PV+ ++ C G++SKP S R
Sbjct: 193 NNNRLVLMTPGTSDLPETIGAVYGGQVVKDLLPVSYEQNGIC-AWGYVSKPSLIKSSRQW 251
Query: 165 GDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQ-YPIAIMNFIVPTRACDVNVTPDKRKV 223
Q F VN R + ++K V+ Y YP ++N +P DVN+ P K ++
Sbjct: 252 ---QTFIVNSRVIGNRMLAKAVDNAYHSMLPHNGYPFVLLNITLPPDQVDVNIHPQKSEI 308
Query: 224 FFSDECSILHALREGLQE 241
F DE S ++ + + E
Sbjct: 309 KFRDESSAFRSVYQAIAE 326
>gi|210612718|ref|ZP_03289433.1| hypothetical protein CLONEX_01635 [Clostridium nexile DSM 1787]
gi|210151411|gb|EEA82419.1| hypothetical protein CLONEX_01635 [Clostridium nexile DSM 1787]
Length = 663
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 98/202 (48%), Gaps = 20/202 (9%)
Query: 606 ERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFE---RLSQSTVLNQQ 662
E+L K+ K+IGQ + + + + L+I+DQHAA E+ +E R + Q
Sbjct: 463 EKLLTKKAAQEYKIIGQLFETYWLVEFHEQLYIIDQHAAHERVLYEKTLRGMKDREFTSQ 522
Query: 663 PLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVE 722
L P+ L+L+ +EE + HMDI GF +E G + ++AVP
Sbjct: 523 YLSPPIILNLSMQEEEALNTHMDIFTNIGFEIE----PFGGDSYAIRAVP---------- 568
Query: 723 DVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQ 782
D + ++A + ++ S+ P V +AS +C++++ L E++
Sbjct: 569 ---DNLFSIAKRELFTEMLDQLVDGIHSSLAPDIVAEKVASMSCKAAVKGNSRLSAAEVE 625
Query: 783 KILEHLADLNSPWNCPHGRPTM 804
++ L +L +P++CPHGRPT+
Sbjct: 626 TLIGELLELENPYHCPHGRPTI 647
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 46/61 (75%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ +++ + +I AG+VI+ +S +KELVEN++DAGA+++ + +KE G + ++ DNGCG
Sbjct: 4 IQVLDQITIDKIAAGEVIERPASIIKELVENAIDAGASAVTVEIKEGGISFIRITDNGCG 63
Query: 72 I 72
I
Sbjct: 64 I 64
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 68/136 (50%), Gaps = 8/136 (5%)
Query: 112 LKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQY-- 169
L T G+ LKD I VFG +I N L + D +V+GF+ KP G +R Y
Sbjct: 197 LHTSGNGKLKDIIYHVFGRDIANNLLETN-ERIDGIQVQGFIGKPIISRG----NRNYEN 251
Query: 170 FFVNDRPVDLPKVSKLVNELYKGAN-SRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDE 228
+F+N R V ++K + + YK +YP ++F + DVNV P K ++ FS++
Sbjct: 252 YFINGRYVKSNIIAKAIEDAYKDFTMQHKYPFTALHFTMDGTDLDVNVHPTKMELRFSNQ 311
Query: 229 CSILHALREGLQEIYS 244
+ + + L++ S
Sbjct: 312 QGVYNFIYNALKQTLS 327
>gi|21227784|ref|NP_633706.1| DNA mismatch repair protein [Methanosarcina mazei Go1]
gi|20906190|gb|AAM31378.1| DNA mismatch repair protein [Methanosarcina mazei Go1]
Length = 689
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 101/189 (53%), Gaps = 19/189 (10%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEE 676
++VIGQ + +I+ + +DL I+DQHAA E+ +E++ +S Q L+ P+ ++LTP+E
Sbjct: 503 LRVIGQVSRMYILAEKGEDLVIIDQHAAHERILYEQVLRSKKSRVQELITPVMIELTPKE 562
Query: 677 EVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLI-STLADNQ 735
+V+ ++ + + GF + E + + VP FG + D+I +AD
Sbjct: 563 KVLMEEYIPYLEEYGFGISE----FGDNTYVVTFVPE----VFGRLENTDVIHDVIADLL 614
Query: 736 GECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPW 795
E + K +T S S+ + ACR++I G A +M+ ++E L +P+
Sbjct: 615 AEGKV----KKETGISEKVSK------TFACRAAIKGGAACTPEQMEDLIEQLKTAEAPY 664
Query: 796 NCPHGRPTM 804
+CPHGRPT+
Sbjct: 665 SCPHGRPTV 673
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 46/62 (74%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR ++K +++I AG+VI+ +S VKELV+NS+DAGAT I I +++ G+ + DNGCG
Sbjct: 6 IRILDKDTINKIAAGEVIERPASVVKELVDNSIDAGATEIRIEVEKGGKRSILIRDNGCG 65
Query: 72 IS 73
+S
Sbjct: 66 MS 67
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 79/157 (50%), Gaps = 9/157 (5%)
Query: 89 ALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCK 148
AL G+ F N GK V L+ GSS L ++++ + G + + P+ ++
Sbjct: 181 ALANPGISFTLLNE-GKPV----LRNTGSSDLFNSMVNLLGPDTARSMLPLDYG-TEEFD 234
Query: 149 VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSR-QYPIAIMNFIV 207
+ G++SKP G + D+ + FVN RPV ++K V E Y + +YP+A++ +
Sbjct: 235 IRGYVSKPELNRGDS--DQLFLFVNTRPVTSSTINKAVREGYYTKMPKGRYPVAVLALTL 292
Query: 208 PTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYS 244
DVNV P K +V FS E + A+ ++++ S
Sbjct: 293 DPGEVDVNVHPRKAEVRFSREKEVGDAVISAVEKVLS 329
>gi|307243917|ref|ZP_07526042.1| DNA mismatch repair protein, C-terminal domain protein
[Peptostreptococcus stomatis DSM 17678]
gi|306492739|gb|EFM64767.1| DNA mismatch repair protein, C-terminal domain protein
[Peptostreptococcus stomatis DSM 17678]
Length = 686
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 98/196 (50%), Gaps = 19/196 (9%)
Query: 613 DFGRMKVIG-QFNLGFIIGKLDQDLFIVDQHAADEKYNFE---RLSQSTVLNQQPLLRPL 668
+F + IG FN + K DQ L+++DQHAA E+ FE + +S + Q LL P+
Sbjct: 490 EFEGLNYIGIVFNTYILFSKSDQ-LYMMDQHAAHERVRFEMYMKSFKSDSIRIQYLLDPI 548
Query: 669 KLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLI 728
+DL+P + VA ++D+ + GF +E H +R +P TFG + + I
Sbjct: 549 IMDLSPTDMEVAIRNIDLFERYGFIVEAFGHKNISVR----GLPN----TFGRPESEKFI 600
Query: 729 STLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHL 788
L D + K DS+ S+ +A AC+S+I D L NE+ +LE L
Sbjct: 601 YELID-----KFLDLDKSSKRDSIYDSKY-DQIAEMACKSAIKANDKLDYNEVMALLESL 654
Query: 789 ADLNSPWNCPHGRPTM 804
++P+ CPHGRP M
Sbjct: 655 KKCDNPYTCPHGRPVM 670
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 53/83 (63%), Gaps = 2/83 (2%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I ++ +++I AG+VI+ SS +KE+VENSLDAGA +I I ++ G++ +V+D+G G
Sbjct: 4 INILDDSTINKIAAGEVIERPSSIIKEVVENSLDAGAKNITIQIENAGKDMIKVIDDGAG 63
Query: 72 ISPNNFKVRAVFLCQAYALIAKG 94
I ++ + FL A + I +
Sbjct: 64 IEADD--INKAFLRHATSKIRRA 84
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 6/127 (4%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPG-QGSGRNLGDRQY 169
+ +T G S+L + I ++G + + L + +S K++G+++ S RN Q
Sbjct: 196 IFETIGDSNLYNAIRMIYGKDTSDHLIKID-YQSSYYKIDGYIANNNVYRSNRN---NQL 251
Query: 170 FFVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDE 228
F+N R V P + +N YK +YP+ +N + DVN+ P K +V F +E
Sbjct: 252 IFINGRYVKSPNIMNAINSAYKDIIPINKYPVYFINLEIDPGKIDVNIHPSKLEVKFDNE 311
Query: 229 CSILHAL 235
IL L
Sbjct: 312 GPILEDL 318
>gi|293400025|ref|ZP_06644171.1| DNA mismatch repair protein HexB [Erysipelotrichaceae bacterium
5_2_54FAA]
gi|291306425|gb|EFE47668.1| DNA mismatch repair protein HexB [Erysipelotrichaceae bacterium
5_2_54FAA]
Length = 692
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 108/202 (53%), Gaps = 29/202 (14%)
Query: 610 RKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQ---QPLLR 666
R +++VIGQF+ +II + ++ L+I+DQHAA E+Y++E + +S + + QPLL
Sbjct: 498 RNPSLPQLRVIGQFHNCYIIAEGEKGLYIIDQHAAQERYHYEVIRESILAGKNDAQPLLL 557
Query: 667 PLKLDLTPEEEVVASMHMD----IIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVE 722
P+ T E V A M ++ ++ + G LE F K + +++ ++
Sbjct: 558 PI----TIEASVSAIMQLEDLNKVMEQLGIHLES---------FGEKTL-VCRELPVWMK 603
Query: 723 DVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQ 782
DV++ + L D +I ++ D A S+ R A +A+ AC SSI +L EM
Sbjct: 604 DVEE-AAFLQD------MIDIWERDKALSLEKLRKHA-IATMACHSSIRFNRSLTMEEMN 655
Query: 783 KILEHLADLNSPWNCPHGRPTM 804
+++E L P++CPHGRPT+
Sbjct: 656 RVIEDLGKCEQPFHCPHGRPTL 677
Score = 47.0 bits (110), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 82/169 (48%), Gaps = 23/169 (13%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICK 143
+ Q +AL + FV ++ G+ V KT+G+ SL + ++ ++G + + +A+
Sbjct: 172 VVQKFALSHPEIGFVLSHD-GRTV----FKTRGNGSLLEVLMQIYGRD--SAKTAIALDG 224
Query: 144 SD-SCKVEGFLSKPGQGSGRNLGDRQY--FFVNDRPVDLPKVSKLVNELYKGANSRQ-YP 199
+D + GF+ +P N + Y ++N R + + K V + Y ++ YP
Sbjct: 225 NDMDYHIGGFIMQPN----FNRATKYYMLLYINGRMIRNYHLQKAVMDAYAPYLPKERYP 280
Query: 200 IAIMNFIVPTRACDVNVTPDKRKVFFSDEC--------SILHALREGLQ 240
IAI+N + + DVNV P K ++ S E +I +AL+E LQ
Sbjct: 281 IAIINMEMDAQLVDVNVHPSKWEIRLSKEKQLEKLVYETISNALKEHLQ 329
Score = 43.9 bits (102), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 23 ICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGI 72
I AG+V++ VKELVEN +DA A+ +EI + + G + ++D+G G+
Sbjct: 15 IAAGEVVERPMGIVKELVENCIDASASHVEIQILQGGIDTITIIDDGIGM 64
>gi|392393730|ref|YP_006430332.1| DNA mismatch repair protein MutL [Desulfitobacterium dehalogenans
ATCC 51507]
gi|390524808|gb|AFM00539.1| DNA mismatch repair protein MutL [Desulfitobacterium dehalogenans
ATCC 51507]
Length = 682
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 102/222 (45%), Gaps = 34/222 (15%)
Query: 602 TTELERLFRKEDFG------------RMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYN 649
T E E L ++ED+G ++ IGQ +I+ + L I DQHAA E+ N
Sbjct: 467 TAEQEMLVKEEDYGITDDIKDQSPLLALRPIGQVFNTYILATDGEQLVIFDQHAAHERIN 526
Query: 650 FERL---SQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLR- 705
+ERL Q N Q LL PL ++ TP EE H ++ GF LE+ G R
Sbjct: 527 YERLLAEHQKNPGNSQMLLIPLPMEFTPGEEEALLEHFLLLNDMGFILEQ-----FGTRT 581
Query: 706 FRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRA 765
+ L+ +P G ++D + ++ ++ T D + + + A
Sbjct: 582 YLLRGIPAYSGPYQGEHLLRDFLD---------QVLLNHIPPTMDQLLEEWIYML----A 628
Query: 766 CRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHL 807
C+ SI + L EM++++ L+ +P+ CPHGRPTM L
Sbjct: 629 CKESIKAKENLTHFEMEQLIVQLSKTLNPYTCPHGRPTMIQL 670
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 67/139 (48%), Gaps = 4/139 (2%)
Query: 103 TGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGR 162
T K+ K +VL+T G L ++I V G L P++ C ++EG++S P
Sbjct: 189 TLKHPKILVLQTPGKGHLLESIGAVLGQATARRLLPLS-CSLGDWQLEGYISPPDLVRST 247
Query: 163 NLGDRQYFFVNDRPVDLPKVSKLVNELYKG-ANSRQYPIAIMNFIVPTRACDVNVTPDKR 221
G+ VN R + +S+ V+E Y S+ YPI ++ +P DVNV P K
Sbjct: 248 KQGET--LIVNQRIIRSNSISRAVSEGYHTLIPSKLYPITVLKLHIPPHEYDVNVHPTKM 305
Query: 222 KVFFSDECSILHALREGLQ 240
++ F E ++ + + ++
Sbjct: 306 EIRFHKERELMEFIADSIR 324
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 40/61 (65%)
Query: 22 RICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFKVRA 81
+I AG+V++ S VKEL+EN+LDA AT IE+ ++ G E +V DNG GI ++ +
Sbjct: 15 QIAAGEVVERPVSVVKELIENALDAQATLIEVIIEGSGVERIRVQDNGQGIPADDLPLTV 74
Query: 82 V 82
+
Sbjct: 75 L 75
>gi|452210264|ref|YP_007490378.1| DNA mismatch repair protein MutL [Methanosarcina mazei Tuc01]
gi|452100166|gb|AGF97106.1| DNA mismatch repair protein MutL [Methanosarcina mazei Tuc01]
Length = 719
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 101/189 (53%), Gaps = 19/189 (10%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEE 676
++VIGQ + +I+ + +DL I+DQHAA E+ +E++ +S Q L+ P+ ++LTP+E
Sbjct: 533 LRVIGQVSRMYILAEKGEDLVIIDQHAAHERILYEQVLRSKKSRVQELITPVMIELTPKE 592
Query: 677 EVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLI-STLADNQ 735
+V+ ++ + + GF + E + + VP FG + D+I +AD
Sbjct: 593 KVLMEEYIPYLEEYGFGISE----FGDNTYVVTFVPE----VFGRLENTDVIHDVIADLL 644
Query: 736 GECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPW 795
E + K +T S S+ + ACR++I G A +M+ ++E L +P+
Sbjct: 645 AEGKV----KKETGISEKVSK------TFACRAAIKGGAACTPEQMEDLIEQLKTAEAPY 694
Query: 796 NCPHGRPTM 804
+CPHGRPT+
Sbjct: 695 SCPHGRPTV 703
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 46/62 (74%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR ++K +++I AG+VI+ +S VKELV+NS+DAGAT I I +++ G+ + DNGCG
Sbjct: 36 IRILDKDTINKIAAGEVIERPASVVKELVDNSIDAGATEIRIEVEKGGKRSILIRDNGCG 95
Query: 72 IS 73
+S
Sbjct: 96 MS 97
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 79/157 (50%), Gaps = 9/157 (5%)
Query: 89 ALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCK 148
AL G+ F N GK V L+ GSS L ++++ + G + + P+ ++
Sbjct: 211 ALANPGISFTLLNE-GKPV----LRNTGSSDLFNSMVNLLGPDTARSMLPLDYG-TEEFD 264
Query: 149 VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSR-QYPIAIMNFIV 207
+ G++SKP G + D+ + FVN RPV ++K V E Y + +YP+A++ +
Sbjct: 265 IRGYVSKPELNRGDS--DQLFLFVNTRPVTSSTINKAVREGYYTKMPKGRYPVAVLALTL 322
Query: 208 PTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYS 244
DVNV P K +V FS E + A+ ++++ S
Sbjct: 323 DPGEVDVNVHPRKAEVRFSREKEVGDAVISAVEKVLS 359
>gi|328953244|ref|YP_004370578.1| DNA mismatch repair protein mutL [Desulfobacca acetoxidans DSM
11109]
gi|328453568|gb|AEB09397.1| DNA mismatch repair protein mutL [Desulfobacca acetoxidans DSM
11109]
Length = 586
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 97/206 (47%), Gaps = 20/206 (9%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLN--QQPLLRPLKLD 671
F +K+IGQ +I+ + L IVDQHAA E+ FE LSQS + +Q LL P+ L+
Sbjct: 395 FAELKIIGQLQETYILAQAPDGLLIVDQHAAHERILFENLSQSWGKSGARQTLLFPVTLE 454
Query: 672 LTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTL 731
L + H+ +++ G LE G F L+ VP +DL S
Sbjct: 455 LDAASAAWSIDHLPVLQAAGMELE----PFGGNTFLLRTVPTCL-------SGQDLESLA 503
Query: 732 ADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADL 791
+ E S I S + D + R +L + +CR +I G +L EM +L L L
Sbjct: 504 PEMIAELSPIKS----SGDG--ETLRRQLLLTMSCRGAIKAGQSLSPEEMHHLLAQLDQL 557
Query: 792 NSPWNCPHGRPTMRHLVDLTTIRKNI 817
+CPHGRP R L+ + IR+N
Sbjct: 558 TVSSHCPHGRPLWR-LLTMPEIRQNF 582
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 39/57 (68%)
Query: 19 VVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPN 75
V +I AG+VI +S VKELVEN+LDAGA SI + ++E G +V DNGCG+ P
Sbjct: 11 VASKIAAGEVITRPASVVKELVENALDAGARSITVEIEEGGCRQIRVTDNGCGMWPQ 67
>gi|91773654|ref|YP_566346.1| DNA mismatch repair protein MutL [Methanococcoides burtonii DSM
6242]
gi|91712669|gb|ABE52596.1| DNA mismatch repair protein MutL [Methanococcoides burtonii DSM
6242]
Length = 603
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 101/194 (52%), Gaps = 27/194 (13%)
Query: 616 RMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPE 675
+ +++GQ N +II + + + IVDQHAA E+ +E++ Q L+ P+ LDLT +
Sbjct: 416 KARIVGQVNELYIIVEFEGGIMIVDQHAAHERVMYEQIRDGNSSGWQELITPVMLDLTSK 475
Query: 676 EEVVASMHMDIIRKNGFSLEE-DPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADN 734
E+V+ ++ ++ + GF++ E P++ F + ++P E + D+I
Sbjct: 476 EKVLLDEYIPLLEEMGFAISEFGPNS-----FVVTSIPSLLGKLENTELIHDII------ 524
Query: 735 QGECSIISSYKM--DTA--DSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLAD 790
++SS K+ DT DS+C + ACR++I G ++M+ +L L
Sbjct: 525 ---MDVLSSGKVKRDTGMFDSLC--------KTMACRAAIKAGAGCSMDQMENLLRQLDM 573
Query: 791 LNSPWNCPHGRPTM 804
+P+ CPHGRPT+
Sbjct: 574 AENPYTCPHGRPTV 587
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 70/127 (55%), Gaps = 4/127 (3%)
Query: 110 VVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQY 169
V++++ S ++ D+II + G++I + PV +SD + G++SKP R+ D+Q+
Sbjct: 200 VLVRSPTSGNVLDSIIYLLGVDIAKKIVPVEF-RSDIVNISGYISKPE--VTRSGTDQQF 256
Query: 170 FFVNDRPVDLPKVSKLVNELYKGANSR-QYPIAIMNFIVPTRACDVNVTPDKRKVFFSDE 228
FF+N R V +S V Y + +YP+A+++ + R DVNV P KR V S E
Sbjct: 257 FFINGRGVSSTSISNAVRLGYYNLIPKGRYPVAVLDLELDLREVDVNVHPAKRYVRLSHE 316
Query: 229 CSILHAL 235
+ A+
Sbjct: 317 REVSDAV 323
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 42/61 (68%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR +++ +++I AG+VI+ +S VKELV+N++DAGAT I + + G E V DNG G
Sbjct: 9 IRVLDEATINKIAAGEVIERPASVVKELVDNAIDAGATEIRVEVVAAGTELITVTDNGSG 68
Query: 72 I 72
+
Sbjct: 69 M 69
>gi|399577953|ref|ZP_10771705.1| DNA mismatch repair protein mutl [Halogranum salarium B-1]
gi|399237395|gb|EJN58327.1| DNA mismatch repair protein mutl [Halogranum salarium B-1]
Length = 550
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 94/208 (45%), Gaps = 29/208 (13%)
Query: 603 TELERLFRKED--FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQS---T 657
T LER R+ED F + VIGQF +++ + D DL +VDQHAA E+ N+ERL + +
Sbjct: 346 TTLER--REEDSLFDDVTVIGQFRDLYLLCEADDDLLVVDQHAAHERINYERLRAALTES 403
Query: 658 VLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKI 717
+ P+ P + L+P E VA + + + GF G +RL +P
Sbjct: 404 SVESVPVDPPETVSLSPAEAAVADDERETLARLGFEFSR----FGGGTYRLTGLPAPLGR 459
Query: 718 TFGVEDVKDLISTL-ADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDAL 776
V +D I A + E D D +L AC S+ GD L
Sbjct: 460 VADVSAFRDAIDAFRAGDDPE---------DARDE--------LLKDLACHPSLKAGDVL 502
Query: 777 GRNEMQKILEHLADLNSPWNCPHGRPTM 804
R ++L L + P+ CPHGRPT+
Sbjct: 503 DRETAAELLGRLGECEQPFACPHGRPTV 530
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 43/65 (66%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
+R + V RI AG+V+ +S VKELVENSLDA ATSI + ++ G E +V D+G G
Sbjct: 3 VRRLPPETVERIAAGEVVTRPASVVKELVENSLDASATSITVDVEGDGTECLRVADDGHG 62
Query: 72 ISPNN 76
+S ++
Sbjct: 63 MSESD 67
Score = 44.3 bits (103), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 72/162 (44%), Gaps = 15/162 (9%)
Query: 88 YALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNI------YNCLEPVAI 141
YAL+ VRF + G++V S T GS + D ++ V+ + ++ VA+
Sbjct: 173 YALLRPDVRFKLRHD-GRDVFS----TPGSGNYTDAVLGVYDRTVAGQSTTFDHETTVAV 227
Query: 142 CKSD-SCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGA-NSRQYP 199
D S +VEG L P R D + VN R V + + + Y+ S + P
Sbjct: 228 DGVDHSLRVEGVLVYPSVTRSRR--DHVHVAVNGRTVGNAGLKRAIVSGYETLLPSGREP 285
Query: 200 IAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQE 241
IA+ + +P D NV P K +V F D + A+ + + E
Sbjct: 286 IAVASVSLPPALVDANVHPSKDEVAFVDGDVVESAVEDAVHE 327
>gi|335436442|ref|ZP_08559237.1| DNA mismatch repair protein MutL [Halorhabdus tiamatea SARL4B]
gi|334897754|gb|EGM35883.1| DNA mismatch repair protein MutL [Halorhabdus tiamatea SARL4B]
Length = 711
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 91/192 (47%), Gaps = 21/192 (10%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTV--LNQQPLLRPLKLDLTP 674
M+++GQ + +++ + D L ++DQHAADE+ N+ERL + Q L P++LDLT
Sbjct: 512 MRILGQLHDTYVVAETDTGLVLIDQHAADERINYERLKDAFAGETTTQVLAEPVELDLTA 571
Query: 675 EEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADN 734
E + + + + + GFS E R+ T GV V L++ AD
Sbjct: 572 RESALFADFEETLARLGFSAE-----------RI------DDRTVGVTAVPSLVAETADP 614
Query: 735 QGECSIISSYKMDTADSVCPSRVRA--MLASRACRSSIMIGDALGRNEMQKILEHLADLN 792
++SS+ AD A +LA AC SI +L +LE L +
Sbjct: 615 DLLRDVLSSFVDSDADPAATVEAAADDVLADLACYPSITGNTSLTEGSTVGLLEKLDECE 674
Query: 793 SPWNCPHGRPTM 804
+P+ CPHGRP +
Sbjct: 675 NPYACPHGRPVV 686
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 42/62 (67%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR ++ + RI AG+V++ +S VKEL ENSLDA A+ + +A++ G E +V D+G G
Sbjct: 4 IRELDGTTIERIAAGEVVERPASVVKELFENSLDADASRVRVAVESGGTESIRVSDDGVG 63
Query: 72 IS 73
+S
Sbjct: 64 MS 65
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 62/137 (45%), Gaps = 10/137 (7%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPV-AICKSDSC--KVEGFLSKPGQGSGRNLGDR 167
T G SL++ ++ V+G + + V A D ++G +S P N DR
Sbjct: 197 TFATTGGGSLRETVMAVYGREVAEAMLDVDAETMPDGPLDGIDGLVSHPET----NRADR 252
Query: 168 QYF--FVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACDVNVTPDKRKVF 224
Y FVN R V + E Y + +YP A+++ +P DVNV P K +V
Sbjct: 253 AYVATFVNGRYVRSSAARNAIVEAYGNQLAPDRYPFAVLDLSLPAGTVDVNVHPRKMEVR 312
Query: 225 FSDECSILHALREGLQE 241
F+DE + +R ++E
Sbjct: 313 FADEEGLREQVRAAVEE 329
>gi|384490227|gb|EIE81449.1| hypothetical protein RO3G_06154 [Rhizopus delemar RA 99-880]
Length = 75
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/68 (60%), Positives = 52/68 (76%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
I I+K VHRIC+GQV+ DL++AVKELVENS+DAGATS+EI KE G E +V D+G
Sbjct: 4 VINAIDKKTVHRICSGQVVLDLATAVKELVENSIDAGATSVEIKFKENGVEGIEVCDDGS 63
Query: 71 GISPNNFK 78
GI P N++
Sbjct: 64 GIDPVNYE 71
>gi|383753870|ref|YP_005432773.1| putative DNA mismatch repair protein MutL [Selenomonas ruminantium
subsp. lactilytica TAM6421]
gi|381365922|dbj|BAL82750.1| putative DNA mismatch repair protein MutL [Selenomonas ruminantium
subsp. lactilytica TAM6421]
Length = 646
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 101/192 (52%), Gaps = 21/192 (10%)
Query: 615 GRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQST--VLNQQPLLRPLKLDL 672
GRM IGQ +L +II + + L+I+DQHAA E+ F++LS + +QQ L+ L L
Sbjct: 455 GRMIPIGQVDLTYIIAQDLKGLYIIDQHAAHERILFDKLSAMADGIPSQQLLVHQL-LTF 513
Query: 673 TPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLA 732
+E + + ++ + GF +E A L +RL VP + + ++++++ L
Sbjct: 514 DRKEAAMVEDNKELFAQLGFHME----AAGDLDYRLMEVPADVPVAEAEDIIREILTDLG 569
Query: 733 DNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLN 792
N E TA + +A LA+ ACR++I G+ L +M+ +L+ L+
Sbjct: 570 -NMHET---------TAKEIR----QACLATTACRAAIKAGEELNMRQMEILLDELSTTA 615
Query: 793 SPWNCPHGRPTM 804
P+ CPHGRPT+
Sbjct: 616 FPYTCPHGRPTI 627
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 78/165 (47%), Gaps = 15/165 (9%)
Query: 106 NVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQ-GSGRNL 164
N SVV T G+ +L D + ++G + + L + + D K+ GF++KP S R
Sbjct: 193 NKTSVV--TPGNGNLFDTVQAIYGGQVADSLLTLKLEDED-LKISGFITKPSMLKSSRTW 249
Query: 165 GDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQ-YPIAIMNFIVPTRACDVNVTPDKRKV 223
Q F VN R + ++K ++ Y+ + +P ++N VP R DVNV P K ++
Sbjct: 250 ---QTFIVNGRIIQNRAIAKAIDNAYRSLIPKSGFPFTVLNIEVPQRTIDVNVHPQKSEM 306
Query: 224 FFSDECSILHALREGLQEIYSPNN-------ASYSVNKVEQLIEP 261
F DE I A+ + + + P+ A KVE +EP
Sbjct: 307 KFEDESRIFKAVYKSVLDAIRPSTGNLTEVAAVVEKPKVEYTMEP 351
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 45/68 (66%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I ++ +++I AG+V++ +S +KEL+EN++DAGAT IE+ + G + +V DNG G
Sbjct: 4 IHVLDDNTINKIAAGEVVERPASVIKELIENAMDAGATRIEVEIMAGGTSFMRVTDNGKG 63
Query: 72 ISPNNFKV 79
+S + V
Sbjct: 64 MSKEDASV 71
>gi|298676065|ref|YP_003727815.1| DNA mismatch repair protein MutL [Methanohalobium evestigatum
Z-7303]
gi|298289053|gb|ADI75019.1| DNA mismatch repair protein MutL [Methanohalobium evestigatum
Z-7303]
Length = 626
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 96/190 (50%), Gaps = 21/190 (11%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEE 676
+KV+GQ + +I+ ++D L ++DQHAA E+ +E + S + Q L+ P+ L+L+ +E
Sbjct: 437 IKVLGQVDELYIVAEMDSRLVLIDQHAAHERIMYEHIRNSKNPDWQELISPITLELSIKE 496
Query: 677 EVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQG 736
+V+ ++ + + GF++ E + + +VP + FG + D TL D
Sbjct: 497 KVLMEEYIPYLEEFGFAISE----FGPSTYIITSVP----VIFGNIEKPD---TLHDMIS 545
Query: 737 ECSIISSYKMDTA--DSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSP 794
E K D D +C + ACRS+I G +M+ ++ L + +P
Sbjct: 546 EILSAGRIKNDVGIYDYMC--------KTIACRSAIKAGHICNTEQMENLIVQLKNTQNP 597
Query: 795 WNCPHGRPTM 804
+ CPHGRPTM
Sbjct: 598 YTCPHGRPTM 607
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 80/163 (49%), Gaps = 9/163 (5%)
Query: 95 VRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLS 154
V F T + G+NV L T S +L DNI+ V+G ++ + PV +S+ +V G++S
Sbjct: 187 VSFTLT-SNGRNV----LHTPSSGNLFDNIVHVYGRDVARSMIPVD-HESELIRVSGYIS 240
Query: 155 KPGQGSGRNLGDRQYFFVNDRPVDLPKVSK-LVNELYKGANSRQYPIAIMNFIVPTRACD 213
KP R+ D Q FF+N+R V +S L Y +YP A++N + D
Sbjct: 241 KPE--FTRSGTDFQSFFINNRSVSSRAISNALRTGYYTLLPKGRYPAAVLNIQINPEEVD 298
Query: 214 VNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASYSVNKVE 256
+NV P K V S E I+ A+ E ++ SVNK E
Sbjct: 299 INVHPRKSHVRLSHEQDIMDAISESVKTALGQAELIPSVNKKE 341
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 56/93 (60%), Gaps = 2/93 (2%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I ++ +++I AG+VI+ +S VKEL+ENS+DAGAT I+I +KE G + V DNG G
Sbjct: 6 IHILDDSTINKIAAGEVIERPASVVKELIENSIDAGATEIKIDVKEGGAKKITVSDNGTG 65
Query: 72 ISPNNFKVRAVFLCQAYALIAKGVRFVCTNTTG 104
+S ++ VR F A + I K T T G
Sbjct: 66 MSYDD--VRLAFTKHATSKIWKLEDLYSTTTLG 96
>gi|320160707|ref|YP_004173931.1| DNA mismatch repair protein MutL [Anaerolinea thermophila UNI-1]
gi|319994560|dbj|BAJ63331.1| DNA mismatch repair protein MutL [Anaerolinea thermophila UNI-1]
Length = 586
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 93/194 (47%), Gaps = 22/194 (11%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQ--STVLNQQPLLRPLKLDLTP 674
++++GQ + +++ + L+++DQHAA E+ FER Q + Q LL P + L+P
Sbjct: 397 LRLVGQVAMAYLVAEGPDGLYLIDQHAAHERVLFERFIQKKGEGIPAQALLEPALVHLSP 456
Query: 675 EEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADN 734
+ + +D + + GF +E PF TF V + L+S
Sbjct: 457 SQARLLEDEVDTLNRLGFHIE----------------PFGPS-TFRVSAIPALLSGADPV 499
Query: 735 QGECSIISSYKMDTADSVCPSRVRAMLASRAC-RSSIMIGDALGRNEMQKILEHLADLNS 793
Q +++ ++ D ++ S V A L +R C R+++ G L E + +L L S
Sbjct: 500 QAVRAVVEDFEED--ETPLQSEVEARLIARICKRTAVKAGQVLSPEEQRALLRDLEACQS 557
Query: 794 PWNCPHGRPTMRHL 807
P CPHGRPTM HL
Sbjct: 558 PRTCPHGRPTMIHL 571
Score = 47.0 bits (110), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 35/54 (64%)
Query: 19 VVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGI 72
V +I AG+V++ +S VKEL+EN+LDA A I + ++ G +V D+G GI
Sbjct: 10 VASQIAAGEVVERPASVVKELIENALDAHARQIVVRVENAGRRAIEVADDGDGI 63
>gi|73669014|ref|YP_305029.1| DNA mismatch repair protein MutL [Methanosarcina barkeri str.
Fusaro]
gi|72396176|gb|AAZ70449.1| DNA mismatch repair protein MutL [Methanosarcina barkeri str.
Fusaro]
Length = 692
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 101/196 (51%), Gaps = 27/196 (13%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLT 673
F +++IGQ + +I+ + +DL ++DQHAA E+ +E++ + Q L+ P+ +DLT
Sbjct: 503 FENLRIIGQVSKLYILAERGEDLVLIDQHAAHERILYEQVLKMKKSRVQELITPVTIDLT 562
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVED---VKDLIST 730
P+E+V+ ++ + GF + E V F ++ +ED + D++S
Sbjct: 563 PKEKVLMEEYIPYLEDFGFGISE-------FGDNTYVVTFVPEVFGRLEDPEVIHDIVSD 615
Query: 731 LADNQGECSIISSYKMDT--ADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHL 788
L + K DT ++ +C + ACR++I G A +M++++E L
Sbjct: 616 LLAS-------GKVKKDTGISEKIC--------KTLACRAAIKGGAACSPRQMEELIEQL 660
Query: 789 ADLNSPWNCPHGRPTM 804
+P++CPHGRPT+
Sbjct: 661 KKAENPYSCPHGRPTV 676
Score = 65.9 bits (159), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 73/137 (53%), Gaps = 4/137 (2%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYF 170
V++ GSS +I+ + G + + P+ +++ ++ G++SKP + R D+ +
Sbjct: 209 VIRNAGSSESFKSIVNLLGPDTARSMLPLE-YRTEDFEIFGYISKPE--TTRRESDQIFL 265
Query: 171 FVNDRPVDLPKVSKLVNE-LYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDEC 229
FVN RPV ++K + E Y +YP+A+++ IV DVNV P K +V FS E
Sbjct: 266 FVNTRPVTSRSINKAIREGYYTKIPKERYPVAVLSLIVNPGEVDVNVHPRKAEVRFSREK 325
Query: 230 SILHALREGLQEIYSPN 246
+ A+ ++++ S N
Sbjct: 326 ELGDAVTSAIEKVLSEN 342
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 45/61 (73%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR ++K +++I AG+VI+ +S VKEL++NS+DAGAT I I +++ G+ V DNGCG
Sbjct: 17 IRLLDKDTINKIAAGEVIERPASVVKELIDNSIDAGATDIRIEVEKGGKRSILVRDNGCG 76
Query: 72 I 72
+
Sbjct: 77 M 77
>gi|163846708|ref|YP_001634752.1| DNA mismatch repair protein MutL [Chloroflexus aurantiacus J-10-fl]
gi|222524517|ref|YP_002568988.1| DNA mismatch repair protein MutL [Chloroflexus sp. Y-400-fl]
gi|163667997|gb|ABY34363.1| DNA mismatch repair protein MutL [Chloroflexus aurantiacus J-10-fl]
gi|222448396|gb|ACM52662.1| DNA mismatch repair protein MutL [Chloroflexus sp. Y-400-fl]
Length = 624
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 96/192 (50%), Gaps = 24/192 (12%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERL----SQSTVLNQQPLLRPLKLDL 672
++V+GQ L +I+ + + ++++DQHAA E+ +E+L +Q V +QQ LL P +++
Sbjct: 437 LRVVGQVGLTYIVAEAPEGMYLIDQHAAHERITYEKLMNQYAQHAVESQQ-LLIPQAVEV 495
Query: 673 TPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLA 732
+PE + + + + + GF LE G ++A+P + + + ++ LA
Sbjct: 496 SPEASALLLGNAERLAEWGFVLEP-----WGTGVLVRAIPATLPTDELTQAIHEIAEKLA 550
Query: 733 DNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLN 792
G + ++ AML + AC +S+ G L EM+++L L
Sbjct: 551 GRGGSDPL--EWR------------EAMLITLACHTSVRAGQPLSHEEMRQLLRQLEQCV 596
Query: 793 SPWNCPHGRPTM 804
SP CPHGRPTM
Sbjct: 597 SPRTCPHGRPTM 608
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 45/68 (66%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR +++ + +I AG+V++ +S VKEL+EN++DAGA I I ++ G +V D+GCG
Sbjct: 3 IRLLDETIAAQIAAGEVVERPASVVKELLENAIDAGAQRIVIEVRGGGLREIRVQDDGCG 62
Query: 72 ISPNNFKV 79
I + ++
Sbjct: 63 IPADEIEL 70
>gi|327265366|ref|XP_003217479.1| PREDICTED: PMS1 protein homolog 1-like [Anolis carolinensis]
Length = 943
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 85/170 (50%), Gaps = 13/170 (7%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIY-NCLEPVAIC 142
L AY +I +R + T+ K+V+ + + K + V G I N + C
Sbjct: 175 LLMAYGIIKPELRIMFTHN-----KTVMWQKTRALDHKTAFMAVVGAAIMDNMVSFQRHC 229
Query: 143 KSDSCKVEGFLSKPGQGSGRNL---GDRQYFFVNDRPVDLPKVSKLVNELYKGA----NS 195
K GFL KP G G +R + FVN+RPV L ++ KLV + YK ++
Sbjct: 230 KDIEVLFSGFLPKPDSGGGLTSHPSSERSFIFVNNRPVYLKEILKLVQQYYKLKFQMDSN 289
Query: 196 RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSP 245
R YP+ ++N I+P A DVN+TPDK +V ++ SI A+ + L +Y P
Sbjct: 290 RSYPVFLINIIIPPSAVDVNLTPDKSQVLLHNQESICLAIDDILTSLYGP 339
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 41/64 (64%)
Query: 19 VVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFK 78
V + + QVI + S VKEL+ENSLDA AT++++ L+ YG + +V DNG GI +
Sbjct: 8 TVRILSSSQVITSVVSVVKELIENSLDANATNVDVKLENYGFDKIEVRDNGDGIRAADVP 67
Query: 79 VRAV 82
V AV
Sbjct: 68 VMAV 71
>gi|448547361|ref|ZP_21626839.1| DNA mismatch repair protein MutL [Haloferax sp. ATCC BAA-645]
gi|445716372|gb|ELZ68116.1| DNA mismatch repair protein MutL [Haloferax sp. ATCC BAA-645]
Length = 562
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 99/204 (48%), Gaps = 20/204 (9%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLS---QSTVLNQQPLLRPLKL 670
F ++VIG+F +++ + D +L +VDQHAA E+ N+ERL +S ++ + P +
Sbjct: 366 FDDLRVIGRFRGLYLLCEADDELLVVDQHAAHERINYERLRRAVESAGVDSVAVDPPATV 425
Query: 671 DLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIST 730
L+P + + + D++ K GF + E +R++AVP F + + D+++
Sbjct: 426 SLSPADAALLDANRDLVEKLGFRVVEFGEGGGTGTYRVEAVPAPLGRPFAPDALADVVAD 485
Query: 731 LADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLAD 790
+ + D +L AC SI GD L +E +++E L
Sbjct: 486 ------IAAGDDADPRDE-----------LLKDLACHPSIKAGDDLTDDEAARLVERLGS 528
Query: 791 LNSPWNCPHGRPTMRHLVDLTTIR 814
+P+ CPHGRPT+ + + T +R
Sbjct: 529 CETPYTCPHGRPTVLAIDEATFVR 552
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 38/55 (69%)
Query: 22 RICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNN 76
+I AG+V+ +S V EL+EN+LDAGA ++EI + G + +V D+G G++ ++
Sbjct: 12 KIAAGEVVARPASVVVELIENALDAGAETVEIEVGGDGTDRIRVADDGRGMAESD 66
>gi|397904384|ref|ZP_10505300.1| DNA mismatch repair protein MutL [Caloramator australicus RC3]
gi|397162604|emb|CCJ32634.1| DNA mismatch repair protein MutL [Caloramator australicus RC3]
Length = 609
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 100/196 (51%), Gaps = 26/196 (13%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERL---SQSTVLNQQPLLRPLKL 670
F ++ IGQ +L +II + + + +I+DQHAA E+ +E+ Q T ++ Q LL P +
Sbjct: 419 FPKLVPIGQIHLTYIIAEAENEFYIIDQHAAHERILYEKYLDEYQRTAIHSQTLLTPKII 478
Query: 671 DLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIST 730
DL ++ +++ K GF +E+ G L++VP + +G + D+ +
Sbjct: 479 DLKTSDKEFLLENIENFAKIGFVIED----FGGNSISLRSVP----VIYGNPNYIDVFNE 530
Query: 731 LADN--QGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHL 788
+ + Q ++S + ++ + AC+ +I GD L +EM K+++ L
Sbjct: 531 ILNEIVQSSGGFLNS-------------INKIIYTMACKGAIKAGDKLTLSEMNKLIDDL 577
Query: 789 ADLNSPWNCPHGRPTM 804
+P++CPHGRPT+
Sbjct: 578 RRCKNPYSCPHGRPTL 593
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 47/68 (69%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR ++ ++ +I AG+V++ +S VKEL+ENS+DAGA+ IE+ ++ G ++ DNG G
Sbjct: 4 IRILDDDLITKIAAGEVVERPASVVKELIENSIDAGASIIEVEIENGGISLIKITDNGHG 63
Query: 72 ISPNNFKV 79
I ++ ++
Sbjct: 64 IEKDDVEI 71
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 82/162 (50%), Gaps = 9/162 (5%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICK 143
+ Q+ AL + + F N GK +V T+G +L + I++++G + + L + +
Sbjct: 174 IVQSLALSKENISFKYKNN-GK----IVFATKGDGNLLNAILSLYGRQVKDNLLKIDYEE 228
Query: 144 SDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKG-ANSRQYPIAI 202
+D K+EG++ G+N + Q F+N R + ++ + +Y+ + S ++P +
Sbjct: 229 ND-IKIEGYIG--NNALGKNNRNYQTLFINGRLIKNKTINAAIENVYRSYSTSDKFPFYV 285
Query: 203 MNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYS 244
+ I+ + DVNV P K +V F ++ I + + LQ ++
Sbjct: 286 VKIIMNPQLIDVNVHPTKAEVKFQNDQEIYRLVYKALQNAFA 327
>gi|225848265|ref|YP_002728428.1| DNA mismatch repair protein MutL [Sulfurihydrogenibium azorense
Az-Fu1]
gi|225644077|gb|ACN99127.1| DNA mismatch repair protein MutL [Sulfurihydrogenibium azorense
Az-Fu1]
Length = 517
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 35/207 (16%)
Query: 615 GRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFE----RLSQSTVLNQQPLLRPLKL 670
G+ ++IGQ FI+ D ++ +DQH A+E+ +E +L +S + Q LL P KL
Sbjct: 339 GKFEIIGQIEDTFIVAYSDSYVYFIDQHVANERVMYEIILSQLKESKKIPSQRLLSPFKL 398
Query: 671 DLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIST 730
DL+P++E + D + GF +E + L ++P++ +I+ VE + +
Sbjct: 399 DLSPKQEFILKEINDTLETLGFKVENN---------YLISIPYNMQISKAVETLYE---- 445
Query: 731 LADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLAD 790
I+ SY T + V +S +CR SI GD L + Q+++++
Sbjct: 446 ---------IVESYPDITHEKVA--------SSLSCRMSITAGDRLTLEKAQELIKNWIK 488
Query: 791 LNSPWNCPHGRPTMRHLVDLTTIRKNI 817
+P CPHGRP + + + + I+K +
Sbjct: 489 TENPNVCPHGRP-IYYKISIDEIKKAV 514
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 56/95 (58%), Gaps = 12/95 (12%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IRP+ VV++I AG+V++ SS +KEL+ENSLD A+ IE+++++ G+ V DNG G
Sbjct: 3 IRPLPDEVVNKIAAGEVVERPSSVLKELIENSLDTSASLIEVSIEKAGKRLISVFDNGEG 62
Query: 72 ISPNNF----------KVRAVFLCQAYALIAKGVR 96
I + K++A L Y++I G R
Sbjct: 63 IEKQDLINAVKRHYTSKIKA--LEDLYSIITYGFR 95
>gi|433637512|ref|YP_007283272.1| DNA mismatch repair protein MutL [Halovivax ruber XH-70]
gi|433289316|gb|AGB15139.1| DNA mismatch repair protein MutL [Halovivax ruber XH-70]
Length = 770
Score = 86.7 bits (213), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 107/230 (46%), Gaps = 19/230 (8%)
Query: 596 RALAAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQ 655
R L E+E + E R++V+GQ + +++ + L ++DQHAADE+ N+ERL Q
Sbjct: 555 RTLTGDVAEIEGEY--ETLPRLRVLGQLHDTYLVCETPDGLALIDQHAADERVNYERLQQ 612
Query: 656 STVLN--QQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPF 713
+ N Q L P++L+LT E + D + + GF + + + AVP
Sbjct: 613 AVAENPAAQALADPVELELTAAESAAFADVADALSQLGFRADR----VEERTVAVTAVPA 668
Query: 714 SKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIG 773
T ++D+++ + G + +T D++ L AC SI
Sbjct: 669 VFDETLDPAQLRDVLAAIVTGDG------ASGAETVDAMADE----FLGDLACYPSITGN 718
Query: 774 DALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKNIDENGAG 823
+L ++ +L+ L D +P+ CPHGRP + H +D T I + + G
Sbjct: 719 TSLHEGSVRDLLDALDDCRNPYACPHGRPVIVH-IDETEIEDRFERDYPG 767
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 46/68 (67%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I +++ V RI AG+V++ +SAVKELVENSLDA A+ I++ ++ G E +V D+G G
Sbjct: 9 IHQLDEDTVARIAAGEVVERPASAVKELVENSLDADASRIDVTVESGGTELIRVADDGQG 68
Query: 72 ISPNNFKV 79
+S + +
Sbjct: 69 MSEADLRA 76
Score = 45.8 bits (107), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 53/133 (39%), Gaps = 20/133 (15%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSC-----KVEGFLSKPGQGSGRNLG 165
V T G L+ ++ V+G + + V D V G +S P N
Sbjct: 221 VFATTGQGDLQAAVLAVYGREVAASMIAVEASGDDLPPGPVESVSGLVSHPET----NRS 276
Query: 166 DRQYF--FVNDRPVDLPKVSKLVNELYKGANSRQ-----YPIAIMNFIVPTRACDVNVTP 218
R+Y +VN R + + + E GA Q YP + VP A DVNV P
Sbjct: 277 TREYLATYVNGRAI----TADAIREGIVGAYGTQLGTDRYPFVVCFLSVPGEAVDVNVHP 332
Query: 219 DKRKVFFSDECSI 231
KR+V F D ++
Sbjct: 333 RKREVRFDDADAV 345
>gi|448544984|ref|ZP_21625797.1| DNA mismatch repair protein MutL, partial [Haloferax sp. ATCC
BAA-646]
gi|445704762|gb|ELZ56671.1| DNA mismatch repair protein MutL, partial [Haloferax sp. ATCC
BAA-646]
Length = 356
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 101/204 (49%), Gaps = 20/204 (9%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLS---QSTVLNQQPLLRPLKL 670
F ++VIG+F +++ + D +L +VDQHAA E+ N+ERL +S ++ + P +
Sbjct: 160 FDDLRVIGRFRGLYLLCEADDELLVVDQHAAHERINYERLRRAVESAGVDSVAVDPPATV 219
Query: 671 DLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIST 730
L+P + + + D++ K GF + E +R++AVP F + + D+++
Sbjct: 220 SLSPADAALLDANRDLVEKLGFRVVEFGEGGGTGTYRVEAVPAPLGRPFAPDALADVVAD 279
Query: 731 LADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLAD 790
+A + + D +L AC SI GD L +E +++E L
Sbjct: 280 IA------AGDDADPRDE-----------LLKDLACHPSIKAGDDLTDDEAARLVERLGS 322
Query: 791 LNSPWNCPHGRPTMRHLVDLTTIR 814
+P+ CPHGRPT+ + + T +R
Sbjct: 323 CETPYTCPHGRPTVLAIDEATFVR 346
>gi|448408504|ref|ZP_21574299.1| DNA mismatch repair protein mutL [Halosimplex carlsbadense 2-9-1]
gi|445674359|gb|ELZ26903.1| DNA mismatch repair protein mutL [Halosimplex carlsbadense 2-9-1]
Length = 762
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 90/190 (47%), Gaps = 17/190 (8%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQ--STVLNQQPLLRPLKLDLTP 674
M+V+GQ + +++ + ++ L +VDQHAADE+ N+ERL + + Q L +P++L LT
Sbjct: 564 MRVLGQLHGTYVLAETEEGLVMVDQHAADERINYERLRERFAGETTTQALAQPVELSLTA 623
Query: 675 EEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADN 734
E + + + + GF E + ++ VP T + ++D ++ +
Sbjct: 624 REAELFETYGEALSTLGFRAER----VGDRTVEVRTVPSLVADTADPDLLRDALAAFVEG 679
Query: 735 QGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSP 794
+G + D +L+ AC SI +L + +LE L D +P
Sbjct: 680 EGSAAETVEAAADE-----------LLSDLACYPSITGNTSLTEGSVTDLLERLDDCENP 728
Query: 795 WNCPHGRPTM 804
W CPHGRP +
Sbjct: 729 WACPHGRPVV 738
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR +++ V RI AG+V++ SS VKELVENSLDA AT +E+ ++ G++ V D+G G
Sbjct: 4 IRRLDEATVERIAAGEVVERPSSVVKELVENSLDADATRVEVTVERGGKDGVTVADDGIG 63
Query: 72 ISPNNFKVRAV 82
++ + RAV
Sbjct: 64 MTETEVR-RAV 73
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 90/246 (36%), Gaps = 40/246 (16%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPV----------------AICKSDSCKVEGFLS 154
T G + ++ +++V+G + + V A+ V G +S
Sbjct: 202 TFATTGQNDRREAVMSVYGREVAESMVEVSAGGEGGGESGDDGDAALPDGPLGGVSGLVS 261
Query: 155 KPGQGSGRNLGDRQYF--FVNDRPVDLPKVSKLVNELYKGA-NSRQYPIAIMNFIVPTRA 211
P R+Y +VN R V V V E Y +YP A++ VP
Sbjct: 262 HPET----TRSTREYLSTYVNGRYVTAGAVRDAVIEAYGHQLAPDRYPFAVLFLDVPAGD 317
Query: 212 CDVNVTPDKRKVFFSDECSILHA---------LREGLQEIYSPNNASYSVNKVEQL-IEP 261
DVNV P K +V F+DE + L +GL +P S EQ I P
Sbjct: 318 VDVNVHPRKLEVRFADEEGVREQIEAAVESALLEDGLLRSGAPRGKSAP----EQAEIAP 373
Query: 262 EKSGPSSGAESCMFLEQLSPDGNGCIEILNEQQISKGNTPKTVEVDTLHSDALEGLVHSS 321
E S P GA E SP+G+ + S G+ T E H +G V S+
Sbjct: 374 ESSEPDDGAGGGPTDEPASPEGSSGTTEPADATTSAGDGEATAEA---HEPDADGTVDSA 430
Query: 322 NENGKG 327
+ G
Sbjct: 431 APSTTG 436
>gi|253681623|ref|ZP_04862420.1| DNA mismatch repair protein MutL [Clostridium botulinum D str.
1873]
gi|253561335|gb|EES90787.1| DNA mismatch repair protein MutL [Clostridium botulinum D str.
1873]
Length = 637
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 104/208 (50%), Gaps = 23/208 (11%)
Query: 604 ELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQ-- 661
+L+ L + + F + +IGQFN +I+ + +++DQHAA EK FE+ ++ + N+
Sbjct: 437 QLDTLDKVDKFPELNIIGQFNKTYILAQTLDIFYMIDQHAAHEKILFEKF-RNQIKNRDV 495
Query: 662 --QPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITF 719
Q LL P+ ++++ E+ S + +I ++GFSLE ++ P +
Sbjct: 496 ISQILLTPVVIEMSAEDFAYYSENKNIFEESGFSLE----LFGDNTISIREAP----MLL 547
Query: 720 GVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRN 779
G K+ + DN I + + V + M+AS AC+++I L +
Sbjct: 548 GKVSTKNFFLEILDN------IKNMGKGNIEEVKHN----MIASLACKAAIKANHTLSYD 597
Query: 780 EMQKILEHLADLNSPWNCPHGRPTMRHL 807
EM ++E L + P+NCPHGRPT+ L
Sbjct: 598 EMCSLVEELRYIEEPFNCPHGRPTIIRL 625
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 21 HRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFKVR 80
++I AG+V++ +S VKELVENS+DA + +I I +KE G+E ++ D+G GI P + V
Sbjct: 13 NKIAAGEVVERPASVVKELVENSIDANSQNITIEIKESGKEEIKITDDGIGIHPED--VE 70
Query: 81 AVFLCQAYALIAKGVRFVCTNTTG 104
F+ + I+ NT G
Sbjct: 71 KAFMPHGTSKISFIEDLYSINTFG 94
Score = 45.1 bits (105), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 62/133 (46%), Gaps = 10/133 (7%)
Query: 112 LKTQGSSSLKDNIITVFGMNIYNCLEPVAICK-SDSCKVEGFL--SKPGQGSGRNLGDRQ 168
L T S +KD I ++G NIY + V K SD V G++ S+ +GS N Q
Sbjct: 197 LITFASEDVKDTIRAIYGKNIYENI--VGFEKHSDIVSVYGYIGNSEISRGSRNN----Q 250
Query: 169 YFFVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSD 227
FVN R + ++ V +K ++ ++P ++ + DVNV P K +V F D
Sbjct: 251 SIFVNKRYIKSGIITAAVENAFKSFSTVNKFPFFVLFLDIYPEFLDVNVHPTKSEVKFQD 310
Query: 228 ECSILHALREGLQ 240
E I + + +
Sbjct: 311 ERIIYKVVFDAVH 323
>gi|28210986|ref|NP_781930.1| DNA mismatch repair protein [Clostridium tetani E88]
gi|81841224|sp|Q895H3.1|MUTL_CLOTE RecName: Full=DNA mismatch repair protein MutL
gi|28203425|gb|AAO35867.1| DNA mismatch repair protein mutL [Clostridium tetani E88]
Length = 620
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 105/208 (50%), Gaps = 33/208 (15%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFE----RLSQSTVLNQQPLLRPLKLDL 672
MK+IGQF+ +I+ + ++L+I+DQHAA EK FE ++ + V Q LL+P+ L+L
Sbjct: 432 MKIIGQFDNTYILAESVKNLYIIDQHAAHEKILFETYRDKIKKDEV-KSQLLLQPIVLEL 490
Query: 673 TPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLA 732
E+ + ++ K GF++E ++ VPF G D+ +L +
Sbjct: 491 DSEDFSYYVDNKELFYKTGFNIE----VFGENTINIREVPF----IMGKPDINNLFMDII 542
Query: 733 DN-----QGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEH 787
+N GE +I Y DS+ AMLA C+S++ D L + EM+ ++
Sbjct: 543 NNIKAMGSGE-TIEVKY-----DSI------AMLA---CKSAVKAHDKLSKEEMEALIND 587
Query: 788 LADLNSPWNCPHGRPTMRHLVDLTTIRK 815
L P+NCPHGRPT+ + L +K
Sbjct: 588 LRFAKDPFNCPHGRPTIIKITSLELEKK 615
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 21 HRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFKVR 80
++I AG+V++ S VKELVENS+DA A +I + +K G++ +V D+G GI ++ ++
Sbjct: 13 NKIAAGEVVERPFSVVKELVENSIDAEAKNITVEVKNGGQDLIKVSDDGAGIYADD--IQ 70
Query: 81 AVFLCQAYALIAKGVRFVCTNTTG 104
FL A + I NT G
Sbjct: 71 KAFLTHATSKILNIDDIFSLNTMG 94
>gi|241950505|ref|XP_002417975.1| DNA mismatch repair protein (mutL homologue), putative [Candida
dubliniensis CD36]
gi|223641313|emb|CAX45694.1| DNA mismatch repair protein (mutL homologue), putative [Candida
dubliniensis CD36]
Length = 595
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 99/203 (48%), Gaps = 12/203 (5%)
Query: 609 FRKEDF--GRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLR 666
F +ED GR KVI Q + FI+ + + ++DQHA+DE+ E+ Q V + P LR
Sbjct: 391 FSREDLAPGRFKVINQIDRKFILLTIADQIVVLDQHASDERIRVEQYLQEFVEQRHPGLR 450
Query: 667 ---PLKLDLTPEEEVVASMHMDIIRKNG--FSLEEDPHALAGLRFRLKAVPFSKKITFGV 721
P+ L P E V+ + G F+ + D + L F L + +
Sbjct: 451 LQNPVTFILHPSETVLFDQYAPNFNTFGIHFATQSDRVVITHLPFLLTKIENDLLKDSLL 510
Query: 722 EDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEM 781
+ DL AD+ I + +T+ + P + ++ S+ACRS+IM GD L ++EM
Sbjct: 511 QHCYDL----ADHVKRVHIDCNNWFETSYHL-PRIITELINSKACRSAIMFGDILTKDEM 565
Query: 782 QKILEHLADLNSPWNCPHGRPTM 804
+I+ L+ P+ C HGRP++
Sbjct: 566 YQIVTKLSQCKLPFQCAHGRPSI 588
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
+IR ++ VV +I + ++ L S V+EL++NS+DAGA I I + + + DNG
Sbjct: 3 SIRQLDDSVVTQIRSHTILHSLDSVVRELLQNSVDAGADKITIKIDPVSLSVY-IHDNGP 61
Query: 71 GISPNNFK 78
GI+P + +
Sbjct: 62 GITPEDLE 69
>gi|313125312|ref|YP_004035576.1| DNA mismatch repair protein mutl [Halogeometricum borinquense DSM
11551]
gi|448287092|ref|ZP_21478308.1| DNA mismatch repair protein mutl [Halogeometricum borinquense DSM
11551]
gi|312291677|gb|ADQ66137.1| DNA mismatch repair protein MutL [Halogeometricum borinquense DSM
11551]
gi|445572838|gb|ELY27368.1| DNA mismatch repair protein mutl [Halogeometricum borinquense DSM
11551]
Length = 586
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 93/207 (44%), Gaps = 26/207 (12%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLD-- 671
F ++VIGQF +++ + D DL ++D HAA E+ N+ERL + + + + +D
Sbjct: 390 FDGVRVIGQFRDLYLLCEADDDLLVIDHHAAHERVNYERLRAAVGAGEVNAVESIPIDPA 449
Query: 672 ----LTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDL 727
L+P + + D + G+ L+ + G R++ VP E V+D
Sbjct: 450 ATVSLSPAQAAATAEWRDELAHLGYELD----SFGGDTVRVRGVPAPMGRAAAPESVRDA 505
Query: 728 ISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEH 787
+ L GE D D +L AC S+ GDAL E +++E
Sbjct: 506 LDAL--RGGET------PGDATDR--------LLKDLACHPSLKAGDALNTEEATRLVER 549
Query: 788 LADLNSPWNCPHGRPTMRHLVDLTTIR 814
L P+ CPHGRPT+ + + T +R
Sbjct: 550 LGSCEQPYACPHGRPTVLSIEEETFVR 576
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 40/65 (61%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
+R +++ V I AG+VI AV ELVEN+LDA AT +E+ + G + +V DNG G
Sbjct: 9 VRKLDEETVASIAAGEVITRPEDAVVELVENALDAEATRVEVTVVGDGTDLLRVRDNGRG 68
Query: 72 ISPNN 76
+S +
Sbjct: 69 MSETD 73
>gi|237839411|ref|XP_002369003.1| DNA mismatch repair protein, putative [Toxoplasma gondii ME49]
gi|211966667|gb|EEB01863.1| DNA mismatch repair protein, putative [Toxoplasma gondii ME49]
Length = 1687
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 48/57 (84%)
Query: 754 PSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
P +V +LASRACRS+IMIGD+L N+MQ +L++LA L+ P+NCPHGRPT+RHL DL
Sbjct: 1395 PKKVWEILASRACRSAIMIGDSLTVNQMQTVLKNLATLHLPFNCPHGRPTVRHLFDL 1451
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%)
Query: 19 VVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNF 77
V +C+ QV+ L S KELVEN++DAGAT++E+ + G +V DNG GI+P +F
Sbjct: 221 VAEAVCSQQVVLGLKSICKELVENAIDAGATTVEVRFVDGGMASVEVRDNGSGIAPQDF 279
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 74/151 (49%), Gaps = 16/151 (10%)
Query: 110 VVLKTQGSSS-LKDNIITVFGMNIYNCLEPVAICKSDSCK---VEGFLSKPGQGSGRNLG 165
+L T+G+++ L D +TV+G V++ ++ + VE LS+P LG
Sbjct: 431 TLLNTRGTATRLLDAAVTVYGERQMQQCTQVSLAGAEPGREWSVEALLSRP------PLG 484
Query: 166 DR----QYFFVNDRPVDLPKV-SKLVNELYKGANSRQ-YPIAIMNFIVPTRACDVNVTPD 219
R Q FFVN R V+ P + KL+N+ Y+ SR +PI I V +VN+ D
Sbjct: 485 VRTSALQLFFVNKRVVEFPPLLQKLINKKYREVCSRHCFPIVIAFATVAPHLLEVNLRKD 544
Query: 220 KRKVFFSDECSILHALREGLQEIYSPNNASY 250
K++V + E I AL G + + S + Y
Sbjct: 545 KQEVLLAVEKEITEALLVGGRALRSFSGFFY 575
Score = 50.1 bits (118), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 35/59 (59%)
Query: 636 LFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSL 694
LFIVDQHA+DEK FE L++ QPLL PL+L L + S IR+NGF +
Sbjct: 1170 LFIVDQHASDEKKRFEDLNEGFKPATQPLLIPLRLHLPVDMARAVSDFDREIRENGFRV 1228
>gi|448556239|ref|ZP_21631964.1| DNA mismatch repair protein MutL, partial [Haloferax sp. ATCC
BAA-644]
gi|445716991|gb|ELZ68720.1| DNA mismatch repair protein MutL, partial [Haloferax sp. ATCC
BAA-644]
Length = 322
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 101/204 (49%), Gaps = 20/204 (9%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLS---QSTVLNQQPLLRPLKL 670
F ++VIG+F +++ + D +L +VDQHAA E+ N+ERL +S ++ + P +
Sbjct: 126 FDDLRVIGRFRGLYLLCEADDELLVVDQHAAHERINYERLRRAVESAGVDSVAVDPPATV 185
Query: 671 DLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIST 730
L+P + + + D++ K GF + E +R++AVP F + + D+++
Sbjct: 186 SLSPADAALLDANRDLVEKLGFRVVEFGEGGGTGTYRVEAVPAPLGRPFAPDALADVVAD 245
Query: 731 LADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLAD 790
+A + + D +L AC SI GD L +E +++E L
Sbjct: 246 IA------AGDDADPRDE-----------LLKDLACHPSIKAGDDLTDDEAARLVERLGS 288
Query: 791 LNSPWNCPHGRPTMRHLVDLTTIR 814
+P+ CPHGRPT+ + + T +R
Sbjct: 289 CETPYTCPHGRPTVLAIDEATFVR 312
>gi|405955739|gb|EKC22731.1| Mismatch repair endonuclease PMS2 [Crassostrea gigas]
Length = 561
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/71 (59%), Positives = 54/71 (76%), Gaps = 4/71 (5%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSI----EIALKEYGEEWFQVVD 67
I+ I+K VHRIC+GQV+ L++AVKELVENS+DAGATS+ EI LK+YG E +V D
Sbjct: 47 IKAIDKKSVHRICSGQVVLTLATAVKELVENSIDAGATSVGKINEIKLKDYGLESVEVSD 106
Query: 68 NGCGISPNNFK 78
NG G+ NNF+
Sbjct: 107 NGSGVEENNFE 117
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 32/50 (64%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFG 129
+ V + +Y +I+ GVR C+N T K +S V+ + G+ +L++NI VFG
Sbjct: 219 KMVQVLTSYCIISTGVRITCSNQTKKGGRSTVVSSSGNKTLRENIADVFG 268
>gi|159899518|ref|YP_001545765.1| DNA mismatch repair protein MutL [Herpetosiphon aurantiacus DSM
785]
gi|159892557|gb|ABX05637.1| DNA mismatch repair protein MutL [Herpetosiphon aurantiacus DSM
785]
Length = 631
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 91/191 (47%), Gaps = 21/191 (10%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERL---SQSTVLNQQPLLRPLKLDLT 673
++V+GQ N +I+ + +++VDQHAA E+ +ERL Q + +Q L+ ++L
Sbjct: 443 LRVVGQVNETYIVAESSDGMYLVDQHAAHERVVYERLMAEHQDVPIERQTLMLAQPIELP 502
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
P + S H+ + + GF EE L+AVP V + + +AD
Sbjct: 503 PAVTRLLSAHLADLEQWGFEAEE----FGEGTLMLRAVPSG----LHVGQIATALMEIAD 554
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNS 793
+ +S T+D R ML + AC SSI G L EM+++L+ L
Sbjct: 555 H------LSYEGGATSDD----RREKMLTTIACHSSIRAGKTLTHEEMRQLLQQLERCEM 604
Query: 794 PWNCPHGRPTM 804
P CPHGRPTM
Sbjct: 605 PRTCPHGRPTM 615
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR ++ + +I AG+V++ +S VKEL+ENS+DAGAT I + +E G+ ++ DNGCG
Sbjct: 3 IRVLDPTLAAQIAAGEVVERPASVVKELIENSVDAGATEIRVEAREGGKRELRIQDNGCG 62
Query: 72 ISPNNFKVRAVFLCQA 87
I+ + +V FL A
Sbjct: 63 IASD--EVETAFLRHA 76
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 97/200 (48%), Gaps = 25/200 (12%)
Query: 88 YALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYN---CLEPVAICKS 144
YAL +R+ GK + L+T G+ L D +I ++G+++ ++ + +
Sbjct: 177 YALAYPNIRWTLL-LDGK----LALQTPGNGRLLDALIELYGIDVGREMISVDRTSEAED 231
Query: 145 DSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPK--VSKLVNELYKGANSR-QYPIA 201
++ +V GF+S+P + R + FVN R + P+ + ++ E Y + ++PI
Sbjct: 232 ETVRVHGFVSQPS--TFRAARSYMHLFVNQRWIK-PQGNLVYMIEEAYHTLLMKGRHPIV 288
Query: 202 IMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQE---------IYSPNNASYSV 252
+N + A DVNV P K +V F ++ + AL + ++E ++ A+ SV
Sbjct: 289 ALNIELEPEAVDVNVHPTKSEVKFRNQSHVYGALTKAVREALAAQSTIRAWTGFGANESV 348
Query: 253 NKVEQLIEP--EKSGPSSGA 270
N+ +L P E+ G S+ A
Sbjct: 349 NRRVELRSPNGERRGSSNDA 368
>gi|51094587|gb|EAL23839.1| similar to PMS4 [Homo sapiens]
Length = 263
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 53/67 (79%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+PI++ VH+IC+G V+ LS+AVKELVENSLDAGAT+I++ LK+YG + +V NGCG
Sbjct: 30 IKPIDRKSVHQICSGPVVPSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSGNGCG 89
Query: 72 ISPNNFK 78
+ NF+
Sbjct: 90 VEEENFE 96
>gi|76800920|ref|YP_325928.1| DNA mismatch repair protein MutL [Natronomonas pharaonis DSM 2160]
gi|76556785|emb|CAI48359.1| DNA mismatch repair protein MutL [Natronomonas pharaonis DSM 2160]
Length = 712
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 16/193 (8%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQST--VLNQQPLLRPLKLDLTP 674
M V GQF+ +++ + D L ++DQHAADE+ N+ERL + L Q L P+ + LT
Sbjct: 513 MTVFGQFDDTYLVAEADDGLVLIDQHAADERINYERLKAAVDGDLTTQALAEPVSVSLTA 572
Query: 675 EEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADN 734
E + + + + + GF + D + + + VE D + LA +
Sbjct: 573 REAALVEEYGEALSRLGFRVRTDDD---------RTLTVTTAPALLVEAAGDAMPELARD 623
Query: 735 QGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSP 794
++ + D + V +L AC SI +L ++ +L L D +P
Sbjct: 624 -----LLGEFTGGDPDGTVAAVVDDLLGDLACHPSIKGNTSLREGTVEGLLSALDDCENP 678
Query: 795 WNCPHGRPTMRHL 807
+ CPHGRPT+ L
Sbjct: 679 YACPHGRPTVLEL 691
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 69/137 (50%), Gaps = 13/137 (9%)
Query: 9 SPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDN 68
+P IR ++ RI AG+V++ +S VKELVEN+LDA A+ +++ ++ G++ V D+
Sbjct: 2 APEIRELDAETRDRIAAGEVVERPASVVKELVENALDADASRVDVTVEAGGKDRIVVADD 61
Query: 69 GCGISPNNF----------KVRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSS 118
G G+S + K+R V + G R + G +V + L+T+
Sbjct: 62 GVGMSETDARAAVKEHTTSKLRDVSDLDTIGTL--GFRGEALHAIG-SVARLRLRTKPRD 118
Query: 119 SLKDNIITVFGMNIYNC 135
+ + V G ++ +C
Sbjct: 119 GTRGTELVVEGGDVVDC 135
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 64/153 (41%), Gaps = 14/153 (9%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICK 143
+ YAL A V V + G+ T G + ++ V+G + + V
Sbjct: 175 VVAGYALAAPDV-AVRLDHDGRET----FATPGDGDRQSAVLEVYGREVAASMVSVEQSW 229
Query: 144 SDS--CKVEGFLSKPGQGSGRNLGDRQYF--FVNDRPVDLPKVSKLVNELY-KGANSRQY 198
D V G +S P N R Y VN R V V + + E Y + + +Y
Sbjct: 230 DDGPVAGVAGLVSHPET----NRAGRDYMTTLVNGRYVTASAVREAIVEAYGRQLAADRY 285
Query: 199 PIAIMNFIVPTRACDVNVTPDKRKVFFSDECSI 231
P A+++ +P DVNV P K +V FSDE ++
Sbjct: 286 PFAVIDIDLPPGGVDVNVHPRKLEVLFSDEKTV 318
>gi|331269501|ref|YP_004395993.1| DNA mismatch repair protein hexb [Clostridium botulinum BKT015925]
gi|329126051|gb|AEB75996.1| DNA mismatch repair protein hexb [Clostridium botulinum BKT015925]
Length = 643
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 96/198 (48%), Gaps = 29/198 (14%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQ----QPLLRPLK 669
F ++ VIGQFN +I+ + +++DQHAA EK FE+ ++ + N+ Q LL P+
Sbjct: 452 FPKLNVIGQFNKTYILAQTLDVFYMIDQHAAHEKILFEKF-RNQIKNRDVISQILLTPVV 510
Query: 670 LDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIS 729
++++ E+ S + +I ++GFS+E ++ P + G KD
Sbjct: 511 IEMSAEDFAYYSDNKNIFEESGFSVE----LFGDNTISIREAP----MLLGKVSTKDFFL 562
Query: 730 TLAD---NQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILE 786
+ D N G +I M+AS AC+++I +L EM ++E
Sbjct: 563 EILDDIKNMGNGNI-------------EEVKHNMIASLACKAAIKANHSLSYEEMSSLVE 609
Query: 787 HLADLNSPWNCPHGRPTM 804
L + P+NCPHGRPT+
Sbjct: 610 ELRYIEEPFNCPHGRPTI 627
Score = 59.3 bits (142), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 59/108 (54%), Gaps = 11/108 (10%)
Query: 21 HRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFKVR 80
++I AG+V++ +S VKELVENS+DA + +I I +KE G+E ++ D+G GI P + V
Sbjct: 13 NKIAAGEVVERPASVVKELVENSIDASSQNITIEIKESGKEEIKITDDGIGIHPED--VE 70
Query: 81 AVFLCQAYALIAKGVRFVCTNTTG---------KNVKSVVLKTQGSSS 119
F+ + I+ NT G V +V+LKT+ S
Sbjct: 71 KAFMPHGTSKISLIEDLYSINTFGFRGEALPSIAAVSNVLLKTRTKDS 118
Score = 47.0 bits (110), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 72/155 (46%), Gaps = 11/155 (7%)
Query: 112 LKTQGSSSLKDNIITVFGMNIYNCLEPVAICK-SDSCKVEGFL--SKPGQGSGRNLGDRQ 168
L T S KD I ++G NIY + ++ K SD V G++ SK +GS N Q
Sbjct: 197 LITFASEDAKDTIRAIYGKNIYENI--ISFEKYSDIVSVYGYIGNSKISRGSRNN----Q 250
Query: 169 YFFVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSD 227
FVN R + ++ V +K ++ ++P ++ + DVNV P K +V F D
Sbjct: 251 SIFVNKRYIKSGIITAAVENAFKSFSTVNKFPFFVLFLDIYPEFLDVNVHPTKSEVKFQD 310
Query: 228 ECSILHALREGLQEIYSPN-NASYSVNKVEQLIEP 261
E I + + + S + S+S+ E+ EP
Sbjct: 311 ERIIYKVVFDAVHSALSDSVRKSFSIEFQEEDSEP 345
>gi|160419154|sp|A4D2C0.1|PMS4L_HUMAN RecName: Full=Postmeiotic segregation increased 4-like protein
gi|51094588|gb|EAL23840.1| similar to PMS4 [Homo sapiens]
Length = 255
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 53/67 (79%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+PI++ VH+IC+G V+ LS+AVKELVENSLDAGAT+I++ LK+YG + +V NGCG
Sbjct: 30 IKPIDRKSVHQICSGPVVPSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSGNGCG 89
Query: 72 ISPNNFK 78
+ NF+
Sbjct: 90 VEEENFE 96
>gi|325263901|ref|ZP_08130634.1| DNA mismatch repair protein HexB [Clostridium sp. D5]
gi|324030939|gb|EGB92221.1| DNA mismatch repair protein HexB [Clostridium sp. D5]
Length = 743
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 116/224 (51%), Gaps = 25/224 (11%)
Query: 588 PENEERKARALAAATTEL----ERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHA 643
PEN+ + LA T +L E+L ++E K+IGQ + + + L+I+DQHA
Sbjct: 522 PENDASLSE-LAGKTEQLNLFDEKLLKREVKAEYKLIGQVFDTYWLVQFQDSLYIIDQHA 580
Query: 644 ADEKYNFERL---SQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHA 700
A E+ +ER ++ Q L P+ L L+ +E + + HMD ++ GF +E
Sbjct: 581 AHERVLYERTLKGMKNREFTSQYLSPPIILSLSMQETELLNEHMDRFQRIGFEIE----P 636
Query: 701 LAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAM 760
G + ++A+P + FG+ K+L+ + D G I++ S+ P +
Sbjct: 637 FGGDEYAVRAIPDN---LFGIAK-KELLLEMLD--GLTDGITT-------SMTPELIDEK 683
Query: 761 LASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTM 804
+AS +C++++ + L E+ ++ L +L++P++CPHGRPT+
Sbjct: 684 VASMSCKAAVKGNNRLSAMEVDTLIGELLELDNPYHCPHGRPTI 727
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 53/83 (63%), Gaps = 10/83 (12%)
Query: 10 PTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNG 69
P I+ +++ + +I AG+VI+ +S VKELVEN++DA AT++ + ++E G + ++ DNG
Sbjct: 2 PHIQVLDQITIDKIAAGEVIERPASIVKELVENAIDARATAVVVEIQEGGISFIRITDNG 61
Query: 70 CGI----SPNNF------KVRAV 82
GI PN F K+RAV
Sbjct: 62 SGIVREDVPNAFLRHSTSKIRAV 84
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 65/131 (49%), Gaps = 6/131 (4%)
Query: 112 LKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSG-RNLGDRQYF 170
L+T G+ LKD I +++G + L + K ++ G+L KP G RN + F
Sbjct: 197 LRTSGNGRLKDVIYSIYGREVAANLIDMDYEKG-GIRITGYLGKPTISRGNRNF---ENF 252
Query: 171 FVNDRPVDLPKVSKLVNELYKG-ANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDEC 229
F+N R V +SK + + Y+ ++P +++F + DVNV P K ++ F +
Sbjct: 253 FINGRYVKSSMISKAIEDAYRDFVMQHKFPFVVLHFHINGEDIDVNVHPTKMELRFQKQQ 312
Query: 230 SILHALREGLQ 240
+ + + EG+
Sbjct: 313 EVYNTVYEGVH 323
>gi|1304121|dbj|BAA07511.1| PMS3 [Homo sapiens]
gi|1407577|dbj|BAA07470.1| hPMS3 [Homo sapiens]
Length = 256
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 53/67 (79%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+PI++ VH+IC+G V+ LS+AVKELVENSLDAGAT+I++ LK+YG + +V NGCG
Sbjct: 31 IKPIDRKSVHQICSGPVVPSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSGNGCG 90
Query: 72 ISPNNFK 78
+ NF+
Sbjct: 91 VEEENFE 97
>gi|308069370|ref|YP_003870975.1| DNA mismatch repair protein mutL [Paenibacillus polymyxa E681]
gi|305858649|gb|ADM70437.1| DNA mismatch repair protein mutL [Paenibacillus polymyxa E681]
Length = 724
Score = 85.9 bits (211), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 101/222 (45%), Gaps = 26/222 (11%)
Query: 587 QPENEERKARALAAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADE 646
+P + A LAA + E+ L F + +IGQ + ++I + DQ L+++DQHAA E
Sbjct: 509 KPRQQRLDAEQLAAVSGEVPEL---PTFPELNLIGQHHGTYLIAQNDQGLYLIDQHAAHE 565
Query: 647 KYN----FERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALA 702
+ N +E+ ++Q+ LL P+ LD TP E + + G LE
Sbjct: 566 RVNYEFYYEKFGNPASVSQE-LLLPITLDFTPSETEKLKTRLHWFEQAGVYLEH----FG 620
Query: 703 GLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLA 762
G FR+ + P+ + G E D+I +A E I K+ A S+ S
Sbjct: 621 GQTFRVSSYPY--WLPQGEE--ADIIEEMAGWVLEERAIDLAKLREAASIMCS------- 669
Query: 763 SRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTM 804
CR+SI L + +LE LA P+ CPHGRP +
Sbjct: 670 ---CRASIKANQKLTDQQAIVLLERLAACKQPYTCPHGRPIV 708
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 53/83 (63%), Gaps = 2/83 (2%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR +++ + ++I AG+V++ +S VKELVEN++DAG T +++ ++E G + +V DNG G
Sbjct: 4 IRVLDEHIANQIAAGEVVERPASVVKELVENAIDAGGTRVDVWVEEGGLQSIRVTDNGSG 63
Query: 72 ISPNNFKVRAVFLCQAYALIAKG 94
I P + V F A + I G
Sbjct: 64 IEPED--VETAFYRHATSKIGHG 84
>gi|302342260|ref|YP_003806789.1| DNA mismatch repair protein MutL [Desulfarculus baarsii DSM 2075]
gi|301638873|gb|ADK84195.1| DNA mismatch repair protein MutL [Desulfarculus baarsii DSM 2075]
Length = 615
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 95/212 (44%), Gaps = 22/212 (10%)
Query: 599 AAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTV 658
A LE LF G + +IGQ + +I+ L I+DQHAA E+ FERL
Sbjct: 406 AGPAPRLEPLFGPA--GELSLIGQLHGLYILCSAPDGLVIIDQHAAHERLTFERLKGQLA 463
Query: 659 ---LNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSK 715
+ Q LL P+ L+L+P+E A++ I + G + G + ++++P
Sbjct: 464 RGAVASQGLLAPVVLELSPQEAAWAALQAPIWARLGLEIAP----FGGNAWAVRSLPALA 519
Query: 716 KITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDA 775
+D++ST++ S +DT P + A L S AC SI G
Sbjct: 520 AGADPGRLARDMLSTMS--------ASGMPVDT-----PEFLEAALISLACHGSIRQGQQ 566
Query: 776 LGRNEMQKILEHLADLNSPWNCPHGRPTMRHL 807
L R EM +++ A L P CPHGRP L
Sbjct: 567 LSRPEMDELVRACAQLPPPVTCPHGRPVFLSL 598
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 45/69 (65%), Gaps = 3/69 (4%)
Query: 12 IRPIN---KGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDN 68
IRP+ V ++I AG+V++ +S +KELVEN+LDAGA ++I ++ G +V D+
Sbjct: 7 IRPVRLLPDEVANQIAAGEVVERPASVLKELVENALDAGARRVQIDVEAAGRGLIRVADD 66
Query: 69 GCGISPNNF 77
G G+S ++
Sbjct: 67 GHGMSADDL 75
>gi|221507841|gb|EEE33428.1| DNA mismatch repair protein, putative [Toxoplasma gondii VEG]
Length = 1131
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 48/57 (84%)
Query: 754 PSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
P +V +LASRACRS+IMIGD+L N+MQ +L++LA L+ P+NCPHGRPT+RHL DL
Sbjct: 834 PKKVWEILASRACRSAIMIGDSLTVNQMQTVLKNLATLHLPFNCPHGRPTVRHLFDL 890
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Query: 636 LFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLE 695
LFIVDQHA+DEK FE L++ QPLL PL+L L + S IR+NGF +
Sbjct: 609 LFIVDQHASDEKKRFEDLNEGFKPATQPLLIPLRLHLPVDMARAVSDFDREIRENGFRV- 667
Query: 696 EDPHALAGLRFRLKA 710
+A R RL A
Sbjct: 668 ----TIARERRRLPA 678
>gi|262196403|ref|YP_003267612.1| DNA mismatch repair protein MutL [Haliangium ochraceum DSM 14365]
gi|262079750|gb|ACY15719.1| DNA mismatch repair protein MutL [Haliangium ochraceum DSM 14365]
Length = 762
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 103/210 (49%), Gaps = 30/210 (14%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQP---LLRPLKL 670
F + IGQ + +++ + + ++ +VDQHAA E+ F+RL + P LL P
Sbjct: 572 FTELSYIGQLDRTYLVCESNGEMVLVDQHAAHERVAFQRLRDRWAQHAVPVQRLLLPKTF 631
Query: 671 DLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDV-KDLIS 729
DL+PE+ VA + GF LE G + LKA+P + + VE V +L+
Sbjct: 632 DLSPEQAAVAEDARATLHDMGFELEH----FGGTTYALKALPAGLRES-DVETVLHELLD 686
Query: 730 TLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLA 789
LA+ G ++ ++D A LA+ AC S + GDAL E++ + + L
Sbjct: 687 DLAERGGSRAL--EERLDLA-----------LATIACHSVVRAGDALSAQEVRALFKSLD 733
Query: 790 DLNSPWNCPHGRPTMRHLVDLTTIRKNIDE 819
+++ +CPHGRP + +R ++DE
Sbjct: 734 EVDFKAHCPHGRPVL--------LRISVDE 755
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 53/80 (66%), Gaps = 2/80 (2%)
Query: 2 DVETPTNSP--TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYG 59
D E+ N P IR + VV +I AG+V++ +S VKELVEN+LDA AT + + ++ G
Sbjct: 10 DAESSENPPRPEIRVLPDTVVDQIAAGEVVERPASVVKELVENALDAHATHVNVEVEAGG 69
Query: 60 EEWFQVVDNGCGISPNNFKV 79
++ +V+DNG G++ ++ ++
Sbjct: 70 KQLIRVLDNGIGMTESDVRL 89
>gi|401564527|ref|ZP_10805414.1| DNA mismatch repair protein, C-terminal domain protein [Selenomonas
sp. FOBRC6]
gi|400188737|gb|EJO22879.1| DNA mismatch repair protein, C-terminal domain protein [Selenomonas
sp. FOBRC6]
Length = 633
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 95/193 (49%), Gaps = 23/193 (11%)
Query: 615 GRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLS-QSTVLNQQPLLRPLKLDLT 673
G + IGQ +L +II + Q L+IVDQHAA E+ F+R S Q+ + Q +L L
Sbjct: 442 GNLLPIGQVDLTYIIAQSAQTLYIVDQHAAHERILFDRFSAQADGIPAQQMLVHAILSFD 501
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLR-FRLKAVPFSKKITFGVEDVKDLISTLA 732
E + ++ + GF LE AG R +RL P + E +++++ +L
Sbjct: 502 AHEAQYIDENAELFDRLGFHLEP-----AGEREYRLTEAPADIPLDEAEETIREILVSLG 556
Query: 733 DNQGECSIISSYKMDTADSVCPSRVR-AMLASRACRSSIMIGDALGRNEMQKILEHLADL 791
D + P+ +R A +A+ ACR++I G+ L +M+ +L+ L
Sbjct: 557 DLH---------------AATPANLRQAGIATMACRAAIKAGEELNMRQMEILLDELRST 601
Query: 792 NSPWNCPHGRPTM 804
P+ CPHGRPT+
Sbjct: 602 PFPFTCPHGRPTI 614
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 67/132 (50%), Gaps = 4/132 (3%)
Query: 106 NVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDS-CKVEGFLSKPGQGSGRNL 164
N + + T G SL+ I +++G + L P+ D+ ++ G++SKP R+
Sbjct: 191 NNNRLTIMTAGDDSLRRTIESIYGRDAAGALIPLDFEDGDAEIRITGYISKPSLI--RSS 248
Query: 165 GDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQ-YPIAIMNFIVPTRACDVNVTPDKRKV 223
Q + VN R + ++K ++ +Y+ + +P+A++ VP R DVNV P K ++
Sbjct: 249 RAWQTYIVNGRTIQNRAIAKAIDNVYRALVPKMGFPLAVLRIEVPQRTIDVNVHPQKTEM 308
Query: 224 FFSDECSILHAL 235
F DE I A+
Sbjct: 309 KFEDEGRIFKAV 320
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 44/62 (70%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I ++ +++I AG+V++ +S VKELVEN++DAGAT++EI + G + +V DNG G
Sbjct: 4 IHVLDDTTINKIAAGEVVERPASVVKELVENAMDAGATAVEIEIMGGGVSFIRVTDNGRG 63
Query: 72 IS 73
++
Sbjct: 64 MT 65
>gi|426356480|ref|XP_004045595.1| PREDICTED: postmeiotic segregation increased 4-like protein-like
[Gorilla gorilla gorilla]
Length = 260
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 53/67 (79%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+PI++ VH+IC+G V+ LS+AVKELVENSLDAGAT+I++ LK+YG + +V NGCG
Sbjct: 35 IKPIDRKSVHQICSGPVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSGNGCG 94
Query: 72 ISPNNFK 78
+ NF+
Sbjct: 95 VEEENFE 101
>gi|328950998|ref|YP_004368333.1| DNA mismatch repair protein mutL [Marinithermus hydrothermalis DSM
14884]
gi|328451322|gb|AEB12223.1| DNA mismatch repair protein mutL [Marinithermus hydrothermalis DSM
14884]
Length = 544
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 95/209 (45%), Gaps = 27/209 (12%)
Query: 610 RKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQP---LLR 666
R F R++ +G+F ++I + + +L++VDQHAA E+ FE L + ++P L
Sbjct: 342 RGHRFPRLRYLGRFRDLYLIAEAEDELWVVDQHAAHERILFEELCRRY--REEPPVELAH 399
Query: 667 PLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKD 726
P + LTPEEE + + + G LE R+R+++VP F +
Sbjct: 400 PELVPLTPEEEARYAERSAELTRAGLVLE----PFGSRRYRVRSVP-----AFLAAHPEL 450
Query: 727 LISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILE 786
+ + G ++ RA+L AC +I G L + Q +L+
Sbjct: 451 VAEVVKGALGPAGFEKAW-------------RAVLGRLACLPAIRAGHPLAQASAQALLD 497
Query: 787 HLADLNSPWNCPHGRPTMRHLVDLTTIRK 815
LA +PW CPHGRPT L +L R+
Sbjct: 498 QLAACETPWVCPHGRPTALVLSELELARR 526
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 37/61 (60%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR + +V I AG+V+ VKELVEN+LDAGAT IE+ L G E V DNG G
Sbjct: 2 IRRLPPELVREIAAGEVVTAPVDVVKELVENALDAGATRIEVELWAGGIEKIVVTDNGAG 61
Query: 72 I 72
I
Sbjct: 62 I 62
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 51/102 (50%), Gaps = 11/102 (10%)
Query: 127 VFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPK----- 181
++G N L PV + + + ++EG +S+P R DR + VN RPV+ P+
Sbjct: 205 IWGPVTANRLLPVRMVQ-EGLRLEGLISRPELVRPRR--DRLHLAVNGRPVEWPEGLLRA 261
Query: 182 VSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKV 223
V + EL QYP+ ++N +P A VN TP K +V
Sbjct: 262 VVRAYRELLPAG---QYPVGVLNLELPPEAVLVNTTPAKDRV 300
>gi|4239950|dbj|BAA74753.1| PMS2L13 [Homo sapiens]
gi|119596966|gb|EAW76560.1| hCG2023604, isoform CRA_b [Homo sapiens]
Length = 389
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 53/67 (79%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+PI++ VH+IC+G V+ LS+AVKELVENSLDAGAT+I++ LK+YG + +V NGCG
Sbjct: 164 IKPIDRKSVHQICSGPVVPSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSGNGCG 223
Query: 72 ISPNNFK 78
+ NF+
Sbjct: 224 VEEENFE 230
>gi|74706325|sp|Q13670.1|PM2PB_HUMAN RecName: Full=Putative postmeiotic segregation increased 2-like
protein 11; AltName: Full=PMS2-related protein 6;
AltName: Full=Putative postmeiotic segregation increased
2 pseudogene 11
gi|1061426|gb|AAA97460.1| hPMSR6 [Homo sapiens]
Length = 270
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 53/67 (79%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+PI++ VH+IC+G V+ LS+AVKELVENSLDAGAT+I++ LK+YG + +V NGCG
Sbjct: 161 IKPIDRKSVHQICSGPVVLSLSTAVKELVENSLDAGATNIDLKLKDYGMDLIEVSGNGCG 220
Query: 72 ISPNNFK 78
+ NF+
Sbjct: 221 VEEENFE 227
>gi|429737002|ref|ZP_19270876.1| DNA mismatch repair protein [Selenomonas sp. oral taxon 138 str.
F0429]
gi|429153636|gb|EKX96414.1| DNA mismatch repair protein [Selenomonas sp. oral taxon 138 str.
F0429]
Length = 633
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 95/193 (49%), Gaps = 23/193 (11%)
Query: 615 GRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLS-QSTVLNQQPLLRPLKLDLT 673
G + IGQ +L +II + Q L+IVDQHAA E+ F+R S Q+ + Q +L L
Sbjct: 442 GNLLPIGQVDLTYIIAQSAQTLYIVDQHAAHERILFDRFSAQADGIPSQQMLVHAILSFD 501
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLR-FRLKAVPFSKKITFGVEDVKDLISTLA 732
E + ++ + GF LE AG R +RL P + E +++++ +L
Sbjct: 502 AHEAQYIDENAELFDRLGFHLEP-----AGEREYRLTEAPADIPLDEAEETIREILVSLG 556
Query: 733 DNQGECSIISSYKMDTADSVCPSRVR-AMLASRACRSSIMIGDALGRNEMQKILEHLADL 791
D + P+ +R A +A+ ACR++I G+ L +M+ +L+ L
Sbjct: 557 DLH---------------AATPANLRQAGIATMACRAAIKAGEELNVRQMEILLDELRST 601
Query: 792 NSPWNCPHGRPTM 804
P+ CPHGRPT+
Sbjct: 602 PFPFTCPHGRPTI 614
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 67/132 (50%), Gaps = 4/132 (3%)
Query: 106 NVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDS-CKVEGFLSKPGQGSGRNL 164
N + + T G SL+ I +++G + L P+ D+ ++ G++SKP R+
Sbjct: 191 NNNRLTIMTAGDDSLRRAIESIYGRDAAGALIPLDFEDGDAEIRITGYISKPSLI--RSS 248
Query: 165 GDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQ-YPIAIMNFIVPTRACDVNVTPDKRKV 223
Q + VN R + ++K ++ +Y+ + +P+A++ VP R DVNV P K ++
Sbjct: 249 RAWQTYIVNGRTIQNRAIAKAIDNVYRALVPKMGFPLAVLRIEVPQRTIDVNVHPQKTEM 308
Query: 224 FFSDECSILHAL 235
F DE I A+
Sbjct: 309 KFEDEGRIFKAV 320
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 43/61 (70%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I ++ +++I AG+V++ +S VKELVEN++DAGAT++EI + G + +V DNG G
Sbjct: 4 IHVLDDTTINKIAAGEVVERPASVVKELVENAMDAGATAVEIEIMGGGVSFIRVTDNGRG 63
Query: 72 I 72
+
Sbjct: 64 M 64
>gi|448507431|ref|ZP_21614992.1| DNA mismatch repair protein MutL [Halorubrum distributum JCM 9100]
gi|448523302|ref|ZP_21618655.1| DNA mismatch repair protein MutL [Halorubrum distributum JCM 10118]
gi|445698554|gb|ELZ50596.1| DNA mismatch repair protein MutL [Halorubrum distributum JCM 9100]
gi|445701701|gb|ELZ53677.1| DNA mismatch repair protein MutL [Halorubrum distributum JCM 10118]
Length = 767
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 108/233 (46%), Gaps = 24/233 (10%)
Query: 581 ATLELSQPENEERKA---RALAAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLF 637
A+ + ++P R A R L TE ER F + ++V+GQ + +++ + L
Sbjct: 531 ASEDATRPTARTRPATRQRTLDGDGTESERGF--DSLPSLRVLGQLHETYVVAEAPDGLV 588
Query: 638 IVDQHAADEKYNFERLSQSTV--LNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLE 695
++DQHAADE+ N+ERL + + Q L +P++++LT E + +D + + GF E
Sbjct: 589 LIDQHAADERVNYERLKAAFADGADAQALAKPVRIELTAREAALFEEFVDDLSEIGFRAE 648
Query: 696 EDPHALAGLR-FRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCP 754
AG R + AVP + ++D++S L D+ D
Sbjct: 649 R-----AGDREVAVTAVPAVFDAALDPDLLRDVLSALVDDAA-----------AGDEPVA 692
Query: 755 SRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHL 807
V +LA AC S+ +L + +L+ L +P+ CPHGRP + L
Sbjct: 693 DVVDELLADLACYPSVTGNTSLTEGRVVDLLDRLDACENPYACPHGRPVVIRL 745
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 46/70 (65%)
Query: 10 PTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNG 69
P I +++ V RI AG+V++ +S VKELVENSLDAGA+ + ++++ G E +V D+G
Sbjct: 4 PDIERLDERTVQRIAAGEVVERPASVVKELVENSLDAGASRVAVSVESGGTEGIRVRDDG 63
Query: 70 CGISPNNFKV 79
GI + +
Sbjct: 64 VGIPEDQLEA 73
Score = 47.8 bits (112), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 61/140 (43%), Gaps = 13/140 (9%)
Query: 112 LKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSC----------KVEGFLSKPGQGSG 161
T+G+ L+ ++ V+G + + V D +V G +S P +
Sbjct: 200 FATEGNGDLRSAVLAVYGREVAESMIDVEWTPEDGPGGEETDAPVRRVSGLVSHPE--TA 257
Query: 162 RNLGDRQYFFVNDRPVDLPKVSKLVNELYKGA-NSRQYPIAIMNFIVPTRACDVNVTPDK 220
R+ D +VN R V + + + Y G +YP A++ VP DVNV P K
Sbjct: 258 RSTRDYLSTYVNGRYVTASALREATLDAYGGQLAPDRYPFAVLFVEVPAGDVDVNVHPRK 317
Query: 221 RKVFFSDECSILHALREGLQ 240
+V F +E ++ A+ + ++
Sbjct: 318 LEVRFDEEPAVRSAVEDAVE 337
>gi|402579067|gb|EJW73020.1| hypothetical protein WUBG_16077 [Wuchereria bancrofti]
Length = 77
Score = 85.1 bits (209), Expect = 2e-13, Method: Composition-based stats.
Identities = 35/63 (55%), Positives = 46/63 (73%)
Query: 754 PSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTI 813
P+++R + ASRACR S+MIG +L +MQKI+ HL L+ PWNCPHGRPT+RHL L +
Sbjct: 15 PAKLRKLFASRACRKSVMIGSSLTMLQMQKIVRHLGTLDHPWNCPHGRPTLRHLCVLKSK 74
Query: 814 RKN 816
N
Sbjct: 75 PSN 77
>gi|448428563|ref|ZP_21584295.1| DNA mismatch repair protein MutL [Halorubrum terrestre JCM 10247]
gi|445676032|gb|ELZ28557.1| DNA mismatch repair protein MutL [Halorubrum terrestre JCM 10247]
Length = 769
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 118/259 (45%), Gaps = 34/259 (13%)
Query: 570 GSVKMRRCFAAATLELSQPENEERKA---RALAAATTELERLFRKEDFGRMKVIGQFNLG 626
GSV+ A+A + ++P R A R L TE ER F + ++V+GQ +
Sbjct: 524 GSVEEDASVASA--DATRPTARTRPATRQRTLDGDGTESEREF--DSLPSLRVLGQLHET 579
Query: 627 FIIGKLDQDLFIVDQHAADEKYNFERLSQSTV--LNQQPLLRPLKLDLTPEEEVVASMHM 684
+++ + L ++DQHAADE+ N+ERL + + Q L P++++LT E + +
Sbjct: 580 YVVAEAPDGLVLIDQHAADERVNYERLKAAFADGADAQALAEPVRIELTAREAALFEEFV 639
Query: 685 DIIRKNGFSLEEDPHALAGLR-FRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISS 743
D + + GF E AG R + AVP + ++D++S L D+
Sbjct: 640 DDLSEIGFRAER-----AGDREVAVTAVPAVFDAALDPDLLRDVLSALVDDAA------- 687
Query: 744 YKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPT 803
D V +LA AC S+ +L + +L+ L +P+ CPHGRP
Sbjct: 688 ----AGDEPVADVVDELLADLACYPSVTGNTSLTEGRVVDLLDRLDACENPYACPHGRPV 743
Query: 804 MRHLVDLTTIRKNIDENGA 822
+ IR + DE G+
Sbjct: 744 V--------IRLDRDEIGS 754
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 46/70 (65%)
Query: 10 PTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNG 69
P I +++ V RI AG+V++ +S VKELVENSLDAGA+ + ++++ G E +V D+G
Sbjct: 4 PDIERLDERTVQRIAAGEVVERPASVVKELVENSLDAGASRVAVSVESGGTEGIRVRDDG 63
Query: 70 CGISPNNFKV 79
GI + +
Sbjct: 64 VGIPEDQLEA 73
Score = 47.4 bits (111), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 61/140 (43%), Gaps = 13/140 (9%)
Query: 112 LKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSC----------KVEGFLSKPGQGSG 161
T+G+ L+ ++ V+G + + V D +V G +S P +
Sbjct: 200 FATEGNGDLRSAVLAVYGREVAESMIDVEWTPEDGPGGEEADAPVRRVSGLVSHPE--TA 257
Query: 162 RNLGDRQYFFVNDRPVDLPKVSKLVNELYKGA-NSRQYPIAIMNFIVPTRACDVNVTPDK 220
R+ D +VN R V + + + Y G +YP A++ VP DVNV P K
Sbjct: 258 RSTRDYLSTYVNGRYVTASALREATLDAYGGQLAPDRYPFAVLFVEVPAGDVDVNVHPRK 317
Query: 221 RKVFFSDECSILHALREGLQ 240
+V F +E ++ A+ + ++
Sbjct: 318 LEVRFDEEPAVRSAVEDAVE 337
>gi|268323523|emb|CBH37111.1| DNA mismatch repair protein [uncultured archaeon]
Length = 573
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 89/175 (50%), Gaps = 21/175 (12%)
Query: 635 DLFIVDQHAADEKYNFERLSQ--STVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGF 692
D+ ++DQHAA E+ NFERL + +++Q LLRP +L+P + + + +R GF
Sbjct: 406 DVIMIDQHAAAERANFERLIERYGHRIDKQTLLRPYMPELSPHQFYRIRENEEALRDMGF 465
Query: 693 SLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSV 752
+E L + ++A+P G +++ +++ L + G+
Sbjct: 466 DIER----LGDDSYIIRAIPVVFHGMIGEDEITEVMVRLVEESGKRE------------- 508
Query: 753 CPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHL 807
R++ + ++ AC++SI G+ L + M+ I+ L + P+ CPHGRPTM L
Sbjct: 509 --ERIKVLFSTAACKASIKAGEKLSYDSMRAIVAGLRNAKIPFTCPHGRPTMIRL 561
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 37/53 (69%)
Query: 20 VHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGI 72
+ +I AG+V+ +S VKEL+ENS+DAG+T I + + G ++ ++ D+G GI
Sbjct: 12 IGQIAAGEVVDRPASVVKELIENSIDAGSTHIVVGVGNGGSDYIRITDDGSGI 64
Score = 46.6 bits (109), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 70/157 (44%), Gaps = 13/157 (8%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCL----EPV 139
+C YA+I ++F + KN+ + T G+ + D I+ +G + N L EP
Sbjct: 174 VCINYAVINPAIKFELFHDD-KNI----ISTLGNGKMLDAIVNTYGSGVANDLIELKEPD 228
Query: 140 AICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQ-Y 198
+ S + ++ G++SKP G + +VN+R V V + + Y + Y
Sbjct: 229 S-STSFNVRINGYISKPAASYGTK--KHLFTYVNNRFVRNELVERAIKRGYMSLLPKYAY 285
Query: 199 PIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHAL 235
P A++ + +VN+ P K ++ F + H +
Sbjct: 286 PFAVLALSIDPGEINVNIHPKKHEIRFYHSDDVFHFI 322
>gi|1304126|dbj|BAA07515.1| PMS8 [Homo sapiens]
gi|1407581|dbj|BAA07475.1| hPMS8 [Homo sapiens]
gi|119596965|gb|EAW76559.1| hCG2023604, isoform CRA_a [Homo sapiens]
Length = 98
Score = 85.1 bits (209), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 53/67 (79%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+PI++ VH+IC+G V+ LS+AVKELVENSLDAGAT+I++ LK+YG + +V NGCG
Sbjct: 19 IKPIDRKSVHQICSGPVVPSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSGNGCG 78
Query: 72 ISPNNFK 78
+ NF+
Sbjct: 79 VEEENFE 85
>gi|160419152|sp|A4D2B8.1|PM2P1_HUMAN RecName: Full=Putative postmeiotic segregation increased 2-like
protein 1; AltName: Full=PMS2-related protein 2;
AltName: Full=Postmeiotic segregation increased 2-like
protein 13; AltName: Full=Postmeiotic segregation
increased 2-like protein 6; AltName: Full=Postmeiotic
segregation increased 2-like protein 8; AltName:
Full=Postmeiotic segregation increased protein 3;
Short=hPMS3; AltName: Full=Postmeiotic segregation
increased protein 8; AltName: Full=Putative postmeiotic
segregation increased 2 pseudogene 1
gi|51094586|gb|EAL23838.1| postmeiotic segregation increased 2-like 1 [Homo sapiens]
Length = 440
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 53/67 (79%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+PI++ VH+IC+G V+ LS+AVKELVENSLDAGAT+I++ LK+YG + +V NGCG
Sbjct: 215 IKPIDRKSVHQICSGPVVPSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSGNGCG 274
Query: 72 ISPNNFK 78
+ NF+
Sbjct: 275 VEEENFE 281
>gi|410671190|ref|YP_006923561.1| DNA mismatch repair protein MutL [Methanolobus psychrophilus R15]
gi|409170318|gb|AFV24193.1| DNA mismatch repair protein MutL [Methanolobus psychrophilus R15]
Length = 623
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 101/201 (50%), Gaps = 29/201 (14%)
Query: 610 RKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLK 669
RK + +KV+GQF+ +II + + L +VDQHAA E+ +E++ + + Q L+ P+
Sbjct: 431 RKGEVPDVKVLGQFSDLYIITETEGKLVLVDQHAAHERIMYEQVLRMRDMGWQELITPVT 490
Query: 670 LDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFG-VED---VK 725
L+L+ +E + ++ + + GFS+ E + + VP FG +ED V
Sbjct: 491 LELSTKEMAIIEDYIPFLEQIGFSISE----FGPGSYVVTTVPS----IFGRLEDPEIVH 542
Query: 726 DLISTLADNQGECSIISSYKMDTA--DSVCPSRVRAMLASRACRSSIMIGDALGRNEMQK 783
D+IS L K DT D +C ++ ACR++I G + +M
Sbjct: 543 DIISDLVSG-------GRIKEDTQVYDRLC--------STMACRAAIKAGAVCTQEQMLG 587
Query: 784 ILEHLADLNSPWNCPHGRPTM 804
+L L ++P+ CPHGRPTM
Sbjct: 588 LLRQLMLCDNPYTCPHGRPTM 608
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 68/136 (50%), Gaps = 4/136 (2%)
Query: 110 VVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQY 169
V++++ S L +I+ ++G ++ L PV + +S+ + G++SKP R+ D Q
Sbjct: 204 VIMRSPSSGDLFGSIVHLYGADVARSLVPVEL-QSEFVSIYGYISKPELT--RSGTDLQA 260
Query: 170 FFVNDRPVDLPKVSKLVN-ELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDE 228
FF+N R + +S V Y +YP A + F + DVNV P KR+V S E
Sbjct: 261 FFINGRSIYSRAISNAVRLGYYTLLPKGRYPAAFLKFDIDPVHVDVNVHPTKREVRLSHE 320
Query: 229 CSILHALREGLQEIYS 244
I A+ +++ S
Sbjct: 321 KEIESAIIAAVEQALS 336
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 42/62 (67%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I +++ +++I AG+VI+ +S VKEL++NS+DA A+ I + +K G + V DNG G
Sbjct: 13 IHVLDESTINKIAAGEVIERPASVVKELIDNSIDAYASDIRVEIKGSGTKSILVADNGSG 72
Query: 72 IS 73
+S
Sbjct: 73 MS 74
>gi|257386447|ref|YP_003176220.1| DNA mismatch repair protein MutL [Halomicrobium mukohataei DSM
12286]
gi|257168754|gb|ACV46513.1| DNA mismatch repair protein MutL [Halomicrobium mukohataei DSM
12286]
Length = 709
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 94/191 (49%), Gaps = 19/191 (9%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQS--TVLNQQPLLRPLKLDLTP 674
++++GQ + +++ + D L ++DQHAADE+ N+ERL + Q L P++L+LT
Sbjct: 511 LRILGQLHETYVVAEADDGLVVIDQHAADERINYERLKDAFEGETTTQALAEPVELELTA 570
Query: 675 EEEVVASMHMDIIRKNGFSLEEDPHALAGLR-FRLKAVPFSKKITFGVEDVKDLISTLAD 733
E V ++ + + GF + G R ++ VP G E V+D+++
Sbjct: 571 GEAAVFEDRVEALARLGFHADR-----TGDRTVEVRTVPGVIADAAGPELVQDVLAAFVA 625
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNS 793
+ E + DT ++ +LA AC SI +L ++++L L D +
Sbjct: 626 GEHEAA-------DTVEAAADE----LLADLACYPSITGNTSLTEGSIRELLAALDDCEN 674
Query: 794 PWNCPHGRPTM 804
P+ CPHGRP +
Sbjct: 675 PYACPHGRPVV 685
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 43/62 (69%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR ++ V RI AG+V++ +S VKELVEN+LDA A + +A+++ G E +V D+G G
Sbjct: 9 IRRLDSATVERIAAGEVVERPASVVKELVENALDADADRVSVAVEQGGIEGIKVTDDGIG 68
Query: 72 IS 73
+S
Sbjct: 69 MS 70
>gi|322421005|ref|YP_004200228.1| DNA mismatch repair protein MutL [Geobacter sp. M18]
gi|320127392|gb|ADW14952.1| DNA mismatch repair protein MutL [Geobacter sp. M18]
Length = 665
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 92/197 (46%), Gaps = 20/197 (10%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTV---LNQQPLLRPLKL 670
F + VIGQFN +I+ + DL ++DQHAA E+ FE+L V ++ Q LL P L
Sbjct: 474 FSSLAVIGQFNASYILCQRGTDLVLIDQHAAHERVAFEKLKGEFVGREVDSQGLLFPETL 533
Query: 671 DLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIST 730
+L+ E V H++ +R+ GFS EE G + L VP T + ++D++
Sbjct: 534 ELSFRESAVLREHVEELRRLGFSFEE----FGGNTWLLNGVPQILSGTQYLRTIRDILEE 589
Query: 731 LADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLAD 790
LA + + + D +LA AC S + L E+ + +
Sbjct: 590 LA-SLSRSRTFTDIQED------------LLARIACHSVVRGRRTLTPLEISALFRQMDQ 636
Query: 791 LNSPWNCPHGRPTMRHL 807
+ NCPHGRP M+ L
Sbjct: 637 TDFSSNCPHGRPVMQAL 653
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 42/62 (67%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR + + + ++I AG+V++ +S KELVEN+LDAG+ + + ++ G +V D+GCG
Sbjct: 5 IRILPENLTNKIAAGEVVERPASVAKELVENALDAGSKEVAVEIESGGRRLIKVTDSGCG 64
Query: 72 IS 73
+S
Sbjct: 65 MS 66
Score = 48.1 bits (113), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 65/143 (45%), Gaps = 9/143 (6%)
Query: 95 VRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLS 154
VRF T KN VV + + LK+ + T+ G +I + L PV+ +V G ++
Sbjct: 186 VRF-----TYKNDGKVVFRAL-DADLKERVATLLGRSIASFLYPVSYQDQGGVRVSGLVA 239
Query: 155 KPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSR-QYPIAIMNFIVPTRACD 213
P R+ Y ++N R + V + + Y+ R +YP+ + + D
Sbjct: 240 AP--ECSRSAASHLYTYINGRFIKDKVVQHAILQAYRNFLERGRYPVVAVFIDIAPGEVD 297
Query: 214 VNVTPDKRKVFFSDECSILHALR 236
VNV P K +V F ++ + A++
Sbjct: 298 VNVHPTKHEVRFREQGRVHDAIQ 320
>gi|357058860|ref|ZP_09119706.1| hypothetical protein HMPREF9334_01423 [Selenomonas infelix ATCC
43532]
gi|355373206|gb|EHG20527.1| hypothetical protein HMPREF9334_01423 [Selenomonas infelix ATCC
43532]
Length = 625
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 114/237 (48%), Gaps = 29/237 (12%)
Query: 571 SVKMRRCFAAATLELSQPENEERKARALAAATTELERLFRKEDFGRMKVIGQFNLGFIIG 630
SV +R AA ++ +EER A + + + +E+ E G + IGQ +L +II
Sbjct: 396 SVDLR----AAQDRVAAVRSEERAAFSATGSHSNVEQGAEME--GNLLPIGQVDLTYIIA 449
Query: 631 KLDQDLFIVDQHAADEKYNFERLS-QSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRK 689
+ Q L+IVDQHAA E+ F+R S Q+ + Q +L L E + ++ +
Sbjct: 450 QSAQSLYIVDQHAAHERILFDRFSAQADGIPSQQMLVHAILSFDAREAQYIEENAELFDR 509
Query: 690 NGFSLEEDPHALAGLR-FRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDT 748
GF LE AG R +RL P + +++++ +L D
Sbjct: 510 LGFHLEP-----AGEREYRLTEAPADIPTDEAEDTIREILMSLGDLH------------- 551
Query: 749 ADSVCPSRVR-AMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTM 804
+ P+ +R A LA+ ACR++I G+ L +M+ +L+ L P+ CPHGRPT+
Sbjct: 552 --AATPANLRQAGLATMACRAAIKAGEELSVRQMEILLDELRVTPFPFTCPHGRPTI 606
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 67/132 (50%), Gaps = 4/132 (3%)
Query: 106 NVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDS-CKVEGFLSKPGQGSGRNL 164
N + + T G SL+ I +++G + L P+ ++ ++ G++SKP R+
Sbjct: 191 NNNRLTIMTAGDDSLRRAIESIYGGDTAGALIPLDFHDEEAEIRITGYISKPS--VIRSS 248
Query: 165 GDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQ-YPIAIMNFIVPTRACDVNVTPDKRKV 223
Q + VN R + ++K ++ +Y+ + +P+A++ VP R DVNV P K ++
Sbjct: 249 RAWQTYIVNGRTIQNRAIAKAIDNVYRALVPKMGFPLAVLRIEVPQRTIDVNVHPQKTEM 308
Query: 224 FFSDECSILHAL 235
F DE I A+
Sbjct: 309 KFEDEGRIFKAV 320
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 44/62 (70%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I ++ +++I AG+V++ +S VKELVEN++DAGAT++EI + G + +V DNG G
Sbjct: 4 IHILDDSTINKIAAGEVVERPASVVKELVENAMDAGATAVEIEIMGGGVSFIRVTDNGRG 63
Query: 72 IS 73
++
Sbjct: 64 MT 65
>gi|327179554|gb|AEA30124.1| mismatch repair protein [Trichomonas tenax]
Length = 532
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 82/163 (50%), Gaps = 18/163 (11%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLT 673
F M++IGQ+N FII K D++ +DQHAA E NFE L + + Q L+ P+K++LT
Sbjct: 388 FKDMEIIGQWNQSFIITKYGCDIYAIDQHAAMEAQNFENLRKKCSIQSQKLIAPIKINLT 447
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
P+E A ++ G+ + + L +K +P + G +D+ +LI+ L +
Sbjct: 448 PQETTAAEECKQRCKEFGYDYDLQDNVLL-----VKTIPSVTTVATGADDLLELITILYE 502
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDAL 776
N S+ M + R + RAC SS+ +GD +
Sbjct: 503 NP------SAQPMT-------RKARIWMQYRACHSSVRVGDTM 532
>gi|410667730|ref|YP_006920101.1| DNA mismatch repair protein MutL [Thermacetogenium phaeum DSM
12270]
gi|409105477|gb|AFV11602.1| DNA mismatch repair protein MutL [Thermacetogenium phaeum DSM
12270]
Length = 575
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 105/202 (51%), Gaps = 22/202 (10%)
Query: 610 RKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQ---QPLLR 666
R+ F M++IGQ +II + ++FI+DQHAA E+ +E + ++ + Q L
Sbjct: 381 RQPFFREMRLIGQAQGLYIIAEKGDNIFIIDQHAAHERIRYEEIMKNMERKEYFAQKLSV 440
Query: 667 PLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLR-FRLKAVPFSKKITFGVEDVK 725
P ++ L+PEE ++ + D+++ G+ L+E AG F + +VP G + +
Sbjct: 441 PQEVRLSPEERIIYLDNKDLLKGVGYELKE-----AGTSSFLIISVPPGLNDDPG-QLFR 494
Query: 726 DLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKIL 785
+++ L +G I M + V AM++ AC+S++ GD L EM+ IL
Sbjct: 495 EMLEVLRQERG----IRENPMKFYEKV------AMMS--ACKSAVKAGDILTTGEMRAIL 542
Query: 786 EHLADLNSPWNCPHGRPTMRHL 807
+ L D +P NCPHGRPT L
Sbjct: 543 QQLDDTANPDNCPHGRPTYIRL 564
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 41/55 (74%)
Query: 19 VVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGIS 73
VV++I AG+V++ S VKEL+EN++DA AT I + +++ G + +V+DNG G++
Sbjct: 11 VVNQIAAGEVVERPVSVVKELLENAIDAAATQITVVIEDAGLKEIRVIDNGMGMT 65
Score = 43.1 bits (100), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 51/121 (42%), Gaps = 16/121 (13%)
Query: 121 KDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLP 180
KDN + +F + + ++ G +SKP R Q FFVN R V
Sbjct: 218 KDNFLEIF-------------YEGEGVRIRGIVSKPQ--FTRASRHYQTFFVNRRLVRNY 262
Query: 181 KVSKLVNELYKG-ANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGL 239
+S+ + Y+G S YP + + + DVNV P K + F+D + AL +
Sbjct: 263 HLSRALESAYEGLVTSGHYPCVAIYLDLEPKTIDVNVHPTKSDIRFADPALVARALYRAV 322
Query: 240 Q 240
+
Sbjct: 323 R 323
>gi|330507604|ref|YP_004384032.1| DNA mismatch repair protein MutL [Methanosaeta concilii GP6]
gi|328928412|gb|AEB68214.1| DNA mismatch repair protein MutL [Methanosaeta concilii GP6]
Length = 571
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 94/196 (47%), Gaps = 19/196 (9%)
Query: 611 KEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTV--LNQQPLLRPL 668
+E +K++GQ +I+ + DQ L ++DQHAA E+ FE L + L +Q L P+
Sbjct: 378 REKRSSLKILGQIKRLYIVAESDQGLVLIDQHAAAERIRFEGLEERYREGLIRQELACPV 437
Query: 669 KLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLI 728
++L EE++ S +++ GF + + G + +++VP + T E V D++
Sbjct: 438 TIELMASEEIMLSSWKEVLDDIGFEIS----SFGGRSYSVRSVPALGQRTESAESVHDVL 493
Query: 729 STLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHL 788
L + SR +L ACR SI G L EM+++L L
Sbjct: 494 KELF-------------LRGKPGPDSSRRDEVLKLLACRGSIKSGKELTLKEMEQLLHDL 540
Query: 789 ADLNSPWNCPHGRPTM 804
+ ++P CPHGRP M
Sbjct: 541 QECSNPTTCPHGRPVM 556
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 48/66 (72%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR +++ V++I AG+VI+ +S VKELVENS+DAGA + I +++ G+ + +V D+G G
Sbjct: 4 IRALDEETVNKIAAGEVIERPASVVKELVENSIDAGAHKVLIEVRDGGKSFIKVTDDGSG 63
Query: 72 ISPNNF 77
I P++
Sbjct: 64 IDPDDL 69
Score = 43.1 bits (100), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 57/128 (44%), Gaps = 10/128 (7%)
Query: 112 LKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLG---DRQ 168
K+ S+S D + +FG+ + P+ ++EG + G NL DR
Sbjct: 198 FKSARSNSWDDILSRIFGLKAVAGMAPLQ-ASGRGWRIEGMI-----GDAFNLRASPDRI 251
Query: 169 YFFVNDRPVDLPKVSKLVNELYKGA-NSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSD 227
+ FVN R V ++ + E Y+ + PIA+++ + DVNV P KR++
Sbjct: 252 FIFVNGRAVSSRPMAGALREAYRNIIPPGKSPIAVLSLEISPDLVDVNVHPAKREIRLLH 311
Query: 228 ECSILHAL 235
E I A+
Sbjct: 312 ENEICSAV 319
>gi|332982486|ref|YP_004463927.1| DNA mismatch repair protein MutL [Mahella australiensis 50-1 BON]
gi|332700164|gb|AEE97105.1| DNA mismatch repair protein MutL [Mahella australiensis 50-1 BON]
Length = 579
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 100/195 (51%), Gaps = 23/195 (11%)
Query: 617 MKVIG-QFNLGFIIGKLDQDLFIVDQHAADEKYNFER---LSQSTVLNQQPLLRPLKLDL 672
M+VIG F+ +I K DQ L+I+DQHAA E+ +E+ + Q L Q L+ PL LD+
Sbjct: 391 MRVIGVLFSTYLLIEKTDQ-LYIIDQHAAHERILYEQYMSMLQKQHLELQYLVSPLVLDI 449
Query: 673 TPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLA 732
TP+E + +M+++R GF +EE + L+AVP + FG + L+
Sbjct: 450 TPQERQLLEDNMELLRSMGFEIEE----FDSDTYVLRAVP----VLFGRPRAEGLLK--- 498
Query: 733 DNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLN 792
II ++ A S R R + ACRS++ D L ++++ ++ + N
Sbjct: 499 ------DIIDGMRLFDAHSPYDYR-REEVMMMACRSAVKAHDHLDQSQIIRLAGEILSGN 551
Query: 793 SPWNCPHGRPTMRHL 807
P CPHGRP +R +
Sbjct: 552 VPPTCPHGRPIVRSI 566
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 36/51 (70%)
Query: 22 RICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGI 72
+I AG+V++ +S VKELVENS+DA AT+I + ++ G +V DNG G+
Sbjct: 9 KIAAGEVVERPASVVKELVENSIDAAATAITVEIENGGMTLIRVTDNGEGM 59
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 71/157 (45%), Gaps = 4/157 (2%)
Query: 106 NVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLG 165
+V VL + G+ L + I V+G + V + + ++ G++ P + R
Sbjct: 186 SVGKQVLYSPGTGHLDEAIAAVYGHETAKKMISVQ-YEWEGIEINGYIGSPD--TARANR 242
Query: 166 DRQYFFVNDRPVDLPKVSKLVNELYKG-ANSRQYPIAIMNFIVPTRACDVNVTPDKRKVF 224
Q FFVN R + P +S+ + E + ++P+ ++N + DVNV P K +V
Sbjct: 243 AFQTFFVNGRYIRSPLLSRALEEAFSTLIMVNRFPMCVINITLDPHDVDVNVHPAKTEVR 302
Query: 225 FSDECSILHALREGLQEIYSPNNASYSVNKVEQLIEP 261
F+D+ + ++ S + S ++ +IEP
Sbjct: 303 FTDDRRVAAVFFHAIKRALSGDGMSSEQDQDNGIIEP 339
>gi|67599551|ref|XP_666295.1| DNA mismatch repair protein, C-terminal domain [Cryptosporidium
hominis TU502]
gi|54657263|gb|EAL36066.1| DNA mismatch repair protein, C-terminal domain [Cryptosporidium
hominis]
Length = 363
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 99/210 (47%), Gaps = 36/210 (17%)
Query: 584 ELSQPENEERKARALAAATTELERLFRKEDFGRMKVIGQFNLGFIIGKL----DQD---- 635
EL EN++ R F+K F +++VIGQFN GFI+ KL +Q+
Sbjct: 107 ELKNTENDQNSNRCFN---------FKKHLFNQLQVIGQFNKGFILTKLSIKEEQNYINH 157
Query: 636 ---------------LFIVDQHAADEKYNFERL-SQSTVLNQQPLLRPLKLDLTPEEEVV 679
+FI+DQHA+DEK FE+L S + + Q L+ PL + LTP +E +
Sbjct: 158 KNNERNGKNMIESLHIFIIDQHASDEKARFEKLNSDLSNIQTQKLISPLSISLTPSQEQL 217
Query: 680 ASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECS 739
+ DI +NGF + ++ G R +L +P I D DL+S + + S
Sbjct: 218 VISYKDIFEQNGFRFIFNSNSEIGSRIQLTQLPVILGIPLKQIDFLDLLSQINKYKVRVS 277
Query: 740 IISSYKMDTADSVCPSRVRAMLASRACRSS 769
II K D P+++ + + S CR +
Sbjct: 278 IIDDSKSKVLD--LPTQISSNI-SVECRQN 304
>gi|118443055|ref|YP_878179.1| DNA mismatch repair protein [Clostridium novyi NT]
gi|166232086|sp|A0Q0M7.1|MUTL_CLONN RecName: Full=DNA mismatch repair protein MutL
gi|118133511|gb|ABK60555.1| DNA mismatch repair protein hexb [Clostridium novyi NT]
Length = 645
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 99/202 (49%), Gaps = 31/202 (15%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQ----QPLLRPLK 669
F R+ ++GQFN +I+ + +++DQHAA EK FE+ ++ + N+ Q LL P+
Sbjct: 454 FPRLNILGQFNKTYILAESLDTFYMIDQHAAHEKILFEKF-KNQIENRDVISQILLTPVI 512
Query: 670 LDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIS 729
++++ E+ S +++I ++GF E + +R + G KD
Sbjct: 513 IEMSAEDFAYYSENINIFHESGFVTEVFGDNIISIR--------EAPMLLGKVSTKDFFL 564
Query: 730 TLAD---NQGECSIISSYKMDTADSVCPSRVRA-MLASRACRSSIMIGDALGRNEMQKIL 785
+ D N G +I ++++ M++S AC+++I L EM ++
Sbjct: 565 EIFDDIKNMGNGNI--------------AKIKHNMISSLACKAAIKANHTLSYEEMNSLI 610
Query: 786 EHLADLNSPWNCPHGRPTMRHL 807
E L + P+NCPHGRPT+ L
Sbjct: 611 EDLRYIEEPFNCPHGRPTIIKL 632
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
Query: 21 HRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFKVR 80
++I AG+V++ +S VKELVENS+DA A +I I +KE G++ ++ D+G GI PN+ +
Sbjct: 13 NKIAAGEVVERPASVVKELVENSIDANAKNITIEIKESGKDSIKISDDGIGIHPND--IE 70
Query: 81 AVFLCQAYALIAKGVRFVCTNTTG 104
F+ + I+ NT G
Sbjct: 71 KAFMPHGTSKISLIEDLYSINTFG 94
Score = 47.8 bits (112), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 70/147 (47%), Gaps = 9/147 (6%)
Query: 112 LKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFL--SKPGQGSGRNLGDRQY 169
L T SS +K+ I +++G NIY + SD V G++ S+ +GS N Q
Sbjct: 197 LMTYASSDVKNTIRSIYGKNIYENIISFE-EHSDIVSVYGYIGNSEISRGSRNN----QS 251
Query: 170 FFVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDE 228
FVN R + ++ V +K ++ ++P ++ + DVNV P K +V F DE
Sbjct: 252 IFVNKRYIKSGTITAAVENAFKSFSTVNKFPFFVLFVDIYPEFIDVNVHPTKSEVKFQDE 311
Query: 229 CSILHALREGLQEIYSPN-NASYSVNK 254
I + + + S + S+++NK
Sbjct: 312 RIIYKVVFDAVHSALSTSIKESFNINK 338
>gi|448414955|ref|ZP_21577904.1| DNA mismatch repair protein mutl [Halosarcina pallida JCM 14848]
gi|445681652|gb|ELZ34082.1| DNA mismatch repair protein mutl [Halosarcina pallida JCM 14848]
Length = 586
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 93/212 (43%), Gaps = 34/212 (16%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQ-----------STVLNQQ 662
F ++VIGQF +++ + D DL ++DQHAA E+ N+ERL S +
Sbjct: 388 FDDVRVIGQFRELYLLCEADDDLLVIDQHAAHERVNYERLRAARDGEDGDSEPSVSADVD 447
Query: 663 PLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVE 722
P P + L+P + A + GF++ DP G R+ AVP E
Sbjct: 448 P---PAAVSLSPAQAAAADEWRAELAHLGFAV--DP--FGGGTVRVSAVPAPMGRAAAPE 500
Query: 723 DVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQ 782
V+D + L GE D D +L AC S+ GD L E
Sbjct: 501 SVRDALDAL--RGGET------PGDATDR--------LLKDLACHPSLKAGDGLSSAEAT 544
Query: 783 KILEHLADLNSPWNCPHGRPTMRHLVDLTTIR 814
+++E L +P+ CPHGRPT+ + + T +R
Sbjct: 545 RLVERLGACETPYACPHGRPTVLSIEEETFVR 576
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 2 DVETPTNSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEE 61
+ E + +RP+++ V I AG+V+ V ELVEN+LDAGA+ IE+ + G
Sbjct: 6 ETEAEAGTGRVRPLDEETVASIAAGEVVTRPEDVVVELVENALDAGASRIEVTVVGDGTP 65
Query: 62 WFQVVDNGCGISPNNFKVRAV 82
+V D+G G+S + RAV
Sbjct: 66 LLRVRDDGRGMSEAD-AARAV 85
Score = 44.7 bits (104), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 60/142 (42%), Gaps = 10/142 (7%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYN---CLEPVAICKSD----SCKVEGFLSKPGQGSGRN 163
V T GS D ++ V+ ++ E + D + +VEG L+ P R
Sbjct: 221 VFCTSGSGDYADAVLGVYDRDVAGRSTTFESERTVEDDGESATVRVEGLLAHPSVTRARR 280
Query: 164 LGDRQYFFVNDRPVDLPKVSKLVNELYKGA-NSRQYPIAIMNFIVPTRACDVNVTPDKRK 222
D Y VN R + + V Y + P+A+++ +P CD NV P KR+
Sbjct: 281 --DHVYTAVNGRAFPSEALRRAVVAGYGDLLPDGRAPVAVVSVSLPAHWCDHNVHPAKRE 338
Query: 223 VFFSDECSILHALREGLQEIYS 244
V ++ A+RE +++ S
Sbjct: 339 VRLRAHRAVERAVRESVRDALS 360
>gi|110667417|ref|YP_657228.1| DNA mismatch repair protein MutL [Haloquadratum walsbyi DSM 16790]
gi|109625164|emb|CAJ51584.1| DNA mismatch repair protein MutL [Haloquadratum walsbyi DSM 16790]
Length = 772
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 94/196 (47%), Gaps = 17/196 (8%)
Query: 612 EDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTV---LNQQPLLRPL 668
E ++++GQ + +II + D L ++DQHAADE+ N+E+L Q+T+ + Q L P+
Sbjct: 566 ESLPSLRILGQIDETYIIAESDDGLVLIDQHAADERINYEQL-QATLAETVTTQALAEPV 624
Query: 669 KLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLI 728
K++LT E + D + + GF + + G + AVP + V+D++
Sbjct: 625 KIELTAGESAQVEEYADALERVGFRVTDGD----GDNIVVTAVPAAFASALDPALVRDVL 680
Query: 729 STLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHL 788
+ A++ + K T D +LA AC S+ AL +LE L
Sbjct: 681 AETAESLNSHDRSETIKTLTDD---------ILADLACYPSLTGNTALTEGSTVNLLEQL 731
Query: 789 ADLNSPWNCPHGRPTM 804
+P+ CPHGRP +
Sbjct: 732 DTCENPYACPHGRPVL 747
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 7 TNSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVV 66
+N I ++ V +I AG+V++ +S VKEL+ENSLDA AT I +A++ G + ++
Sbjct: 3 SNENAITALDTETVRQIAAGEVVERPASVVKELIENSLDADATRISVAVESGGADGIRIR 62
Query: 67 DNGCGISPNNFKVRAV 82
D+G G+ + + RA+
Sbjct: 63 DDGIGMDEDAVQ-RAI 77
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 67/139 (48%), Gaps = 14/139 (10%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKV---EGFLSKPGQGSGRNLGDR 167
V T G +L+ +++V+G + + + +S ++ EG +S P + R
Sbjct: 201 VFATTGRGNLESAVLSVYGREVAESMISITTGDIESDRITAIEGLISHPE----KTRSTR 256
Query: 168 QYF--FVNDRPVDLPKVSK-LVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVF 224
QY F+N R V+ + + ++N + +YP A++ + + DVNV P K +V
Sbjct: 257 QYLSTFINGRYVEARALREAIINAYGDQLAANRYPFALLFLDIDPGSIDVNVHPRKMEVR 316
Query: 225 FSDEC----SILHALREGL 239
F +E ++ +A+RE L
Sbjct: 317 FDNETGVRDAVTNAIREAL 335
>gi|403380641|ref|ZP_10922698.1| DNA mismatch repair protein mutL [Paenibacillus sp. JC66]
Length = 750
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 113/243 (46%), Gaps = 45/243 (18%)
Query: 575 RRCFAAATLELS---QPENEERKARALAAATTELERLFRKEDFGRMKVIGQFNLGFIIGK 631
RR +AA+ EL+ QP+ A AA +T F + IGQ + +I+ +
Sbjct: 524 RRGMSAASAELAAGLQPQP------ATAAESTRGPGGL--PAFPALTPIGQLHGTYILAQ 575
Query: 632 LDQDLFIVDQHAADEK----YNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDII 687
+Q L+++DQHAA E+ Y +E+ + +Q+ LL PL L+ TP E + + +D
Sbjct: 576 NEQGLYLIDQHAAHERINYEYYYEKFGKPEEASQE-LLVPLTLEFTPAEAALLNERLDWF 634
Query: 688 RKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMD 747
+ G +E + G F ++A P F + K+LI +A E + ++D
Sbjct: 635 ERVGVYME----SFGGASFIVRAYPH----WFPAGEEKELIEEMA----EWMLTEKKQLD 682
Query: 748 TA------DSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGR 801
A ++C +C++SI AL EM+ ++ LA P+ CPHGR
Sbjct: 683 LAKLREKSSTLC-----------SCKASIKANQALSIAEMETLIRRLAGCRIPYTCPHGR 731
Query: 802 PTM 804
P +
Sbjct: 732 PIV 734
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 68/127 (53%), Gaps = 23/127 (18%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR ++ + ++I AG+V++ SS VKELVENS+DAG+T IE+ L+E G + +V DNG G
Sbjct: 4 IRLLDDHIANQIAAGEVVERPSSVVKELVENSIDAGSTRIEVFLEEGGIQLIRVKDNGSG 63
Query: 72 I-------------------SPNNFKVRAV-FLCQAYALIAKGVRFVCT---NTTGKNVK 108
+ S + F++R++ F +A IA + C NT+G +
Sbjct: 64 MEKSDVQLAFHRHATSKISASKDLFRIRSLGFRGEALPSIAAVAKVECVTSDNTSGLGTR 123
Query: 109 SVVLKTQ 115
VV Q
Sbjct: 124 IVVAGGQ 130
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 74/168 (44%), Gaps = 20/168 (11%)
Query: 89 ALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCK 148
AL G+ F K+ + +L T G+ L I V+G + + V++ D
Sbjct: 179 ALAHPGIAFSL-----KHNHNSLLHTLGNGDLLQVIAAVYGTSAAKQMLAVSLETPDYT- 232
Query: 149 VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANS----RQYPIAIMN 204
+ G++S+P G +N R + + LV L KG ++ +YP+A+++
Sbjct: 233 ISGYISRPEWTRANRYGIST--IINGRYI---RNYGLVQALLKGYHTLLPINRYPLAVLH 287
Query: 205 FIVPTRACDVNVTPDKRKVFFSDECSILHALREGL-----QEIYSPNN 247
+ DVNV P K +V FS E +L ++ E + QE+ P
Sbjct: 288 LEMSPELVDVNVHPAKLEVRFSKEPELLQSVEESVRAALAQEVLIPEG 335
>gi|385802844|ref|YP_005839244.1| DNA mismatch repair protein MutL [Haloquadratum walsbyi C23]
gi|339728336|emb|CCC39482.1| DNA mismatch repair protein MutL [Haloquadratum walsbyi C23]
Length = 772
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 94/196 (47%), Gaps = 17/196 (8%)
Query: 612 EDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTV---LNQQPLLRPL 668
E ++++GQ + +II + D L ++DQHAADE+ N+E+L Q+T+ + Q L P+
Sbjct: 566 ESLPSLRILGQIDETYIIAESDDGLVLIDQHAADERINYEQL-QATLAETVTTQALAEPV 624
Query: 669 KLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLI 728
K++LT E + D + + GF + + G + AVP + V+D++
Sbjct: 625 KIELTAGESAQVEEYADALERVGFRVTDGD----GDNIVVTAVPAAFASALDPALVRDVL 680
Query: 729 STLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHL 788
+ A++ + K T D +LA AC S+ AL +LE L
Sbjct: 681 AETAESLNSHDRSETIKTLTDD---------ILADLACYPSLTGNTALTEGSTVNLLEQL 731
Query: 789 ADLNSPWNCPHGRPTM 804
+P+ CPHGRP +
Sbjct: 732 DTCENPYACPHGRPVL 747
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Query: 7 TNSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVV 66
+N I ++ V +I AG+V++ +S VKEL+ENSLDA AT I +A++ G + ++
Sbjct: 3 SNENAITALDTETVRQIAAGEVVERPASVVKELIENSLDADATRISVAVESGGADGIRIR 62
Query: 67 DNGCGISPNNFKVRAV 82
D+G G+ + + RA+
Sbjct: 63 DDGIGMDEDAVQ-RAI 77
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 66/139 (47%), Gaps = 14/139 (10%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKV---EGFLSKPGQGSGRNLGDR 167
V T G +L+ +++V+G + + + +S ++ EG +S P R
Sbjct: 201 VFATTGRGNLESAVLSVYGREVAESMISITTGDIESDRITAIEGLISHPETTRST----R 256
Query: 168 QYF--FVNDRPVDLPKVSK-LVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVF 224
QY F+N R V+ + + ++N + +YP A++ + + DVNV P K +V
Sbjct: 257 QYLSTFINGRYVEARALREAIINAYGDQLAANRYPFALLFLDIDPGSIDVNVHPRKMEVR 316
Query: 225 FSDEC----SILHALREGL 239
F +E ++ +A+RE L
Sbjct: 317 FDNETGVRDAVTNAIREAL 335
>gi|448481589|ref|ZP_21604940.1| DNA mismatch repair protein MutL [Halorubrum arcis JCM 13916]
gi|445821842|gb|EMA71626.1| DNA mismatch repair protein MutL [Halorubrum arcis JCM 13916]
Length = 767
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 107/233 (45%), Gaps = 24/233 (10%)
Query: 581 ATLELSQPENEERKA---RALAAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLF 637
A+ + ++P R A R L TE ER F + ++V+GQ + +++ + L
Sbjct: 531 ASEDATRPTARTRPATRQRTLDGDGTESEREF--DSLPSLRVLGQLHETYVVAEAPDGLV 588
Query: 638 IVDQHAADEKYNFERLSQSTV--LNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLE 695
++DQHAADE+ N+ERL + + Q L P++++LT E + +D + + GF E
Sbjct: 589 LIDQHAADERVNYERLKAAFADGADAQALAEPVRIELTAREAALFEEFVDDLSEIGFRAE 648
Query: 696 EDPHALAGLR-FRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCP 754
AG R + AVP + ++D++S L D+ D
Sbjct: 649 R-----AGDREVAVTAVPAVFDAALDPDLLRDVLSALVDDAA-----------AGDEPVA 692
Query: 755 SRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHL 807
V +LA AC S+ +L + +L+ L +P+ CPHGRP + L
Sbjct: 693 DVVDELLADLACYPSVTGNTSLTEGRVVDLLDRLDACENPYACPHGRPVVIRL 745
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 46/70 (65%)
Query: 10 PTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNG 69
P I +++ V RI AG+V++ +S VKELVENSLDAGA+ + ++++ G E +V D+G
Sbjct: 4 PDIERLDERTVQRIAAGEVVERPASVVKELVENSLDAGASRVAVSVESGGTEGIRVRDDG 63
Query: 70 CGISPNNFKV 79
GI + +
Sbjct: 64 VGIPEDQLEA 73
Score = 47.4 bits (111), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 61/140 (43%), Gaps = 13/140 (9%)
Query: 112 LKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSC----------KVEGFLSKPGQGSG 161
T+G+ L+ ++ V+G + + V D +V G +S P +
Sbjct: 200 FATEGNGDLRSAVLAVYGREVAESMIDVDWTPEDGPAGGEIDAPVKRVTGLISHPE--TA 257
Query: 162 RNLGDRQYFFVNDRPVDLPKVSKLVNELYKGA-NSRQYPIAIMNFIVPTRACDVNVTPDK 220
R+ D +VN R V + + + Y G +YP A++ VP DVNV P K
Sbjct: 258 RSTRDYLSTYVNGRYVTASALREATLDAYGGQLAPDRYPFAVLFVEVPAGDVDVNVHPRK 317
Query: 221 RKVFFSDECSILHALREGLQ 240
+V F +E ++ A+ + ++
Sbjct: 318 LEVRFDEEPAVRSAVEDAVE 337
>gi|392960660|ref|ZP_10326126.1| DNA mismatch repair protein mutL [Pelosinus fermentans DSM 17108]
gi|421054582|ref|ZP_15517549.1| DNA mismatch repair protein MutL [Pelosinus fermentans B4]
gi|421057356|ref|ZP_15520200.1| DNA mismatch repair protein mutL [Pelosinus fermentans B3]
gi|421065505|ref|ZP_15527246.1| DNA mismatch repair protein mutL [Pelosinus fermentans A12]
gi|421071445|ref|ZP_15532563.1| DNA mismatch repair protein mutL [Pelosinus fermentans A11]
gi|392440684|gb|EIW18353.1| DNA mismatch repair protein MutL [Pelosinus fermentans B4]
gi|392447072|gb|EIW24335.1| DNA mismatch repair protein mutL [Pelosinus fermentans A11]
gi|392454796|gb|EIW31615.1| DNA mismatch repair protein mutL [Pelosinus fermentans DSM 17108]
gi|392458759|gb|EIW35253.1| DNA mismatch repair protein mutL [Pelosinus fermentans A12]
gi|392463264|gb|EIW39234.1| DNA mismatch repair protein mutL [Pelosinus fermentans B3]
Length = 606
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 92/188 (48%), Gaps = 23/188 (12%)
Query: 620 IGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTV-LNQQPLLRPLKLDLTPEEEV 678
+GQ + FII K L+I+DQHAA E+ ++++SQ T + Q LL PL LD E
Sbjct: 424 LGQVDDCFIISKGPDGLYIIDQHAAHERILYDKMSQHTERIPSQQLLVPLFLDFDTTEIN 483
Query: 679 VASMHMDIIRKNGFSLEEDPHALAGLR-FRLKAVPFSKKITFGVEDVKDLISTLADNQGE 737
+ S + D K GF+LE LAG RL +P D+ L++ +
Sbjct: 484 IISEYHDTFYKLGFTLE-----LAGPNTMRLSELP---------SDIP-----LSETEAA 524
Query: 738 CSIISSYKMDTADSVCPSRVRAM-LASRACRSSIMIGDALGRNEMQKILEHLADLNSPWN 796
I Y + D P +R L +CR++I G+ L +MQ ++ L + + P+
Sbjct: 525 IRQILEYIQNMHDP-NPQELRHHCLQIASCRAAIKAGETLNMRQMQALIGELCNTHLPYT 583
Query: 797 CPHGRPTM 804
CPHGRP M
Sbjct: 584 CPHGRPAM 591
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 89/171 (52%), Gaps = 10/171 (5%)
Query: 106 NVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKS-DSCKVEGFLSKPGQ-GSGRN 163
N +VL T G++ L+D + ++G I L PV + D+ K+ G+LSKP S R
Sbjct: 192 NNNRLVLSTPGNNQLQDTLTNIYGQKIAPDLLPVHYENTIDNIKISGYLSKPTLLKSSRQ 251
Query: 164 LGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQ-YPIAIMNFIVPTRACDVNVTPDKRK 222
Q VN R ++ ++K ++ Y + YP+A++N VPT DVNV P K +
Sbjct: 252 W---QTVIVNARVINSRSIAKALDNAYHSLLPKSGYPLAVLNLSVPTDTIDVNVHPQKSE 308
Query: 223 VFFSDECSILHALREGLQEIYSPNNASYSVNKVEQLIEPEKSGPSSGAESC 273
V FSDE I A+ + + E+ S A ++ +++ +E K PSS + S
Sbjct: 309 VKFSDEQKIFRAVYKAVIEVLS---APHAPDQLAATVE-FKPNPSSYSHSA 355
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 43/62 (69%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I +++ ++I AG+V++ SS VKELVENS+DA + +IEI + E G + ++ D+G G
Sbjct: 4 IHVLDENTANKIAAGEVVERPSSIVKELVENSIDAQSKNIEIEIAEGGIGFIRITDDGIG 63
Query: 72 IS 73
+S
Sbjct: 64 MS 65
>gi|374854009|dbj|BAL56902.1| DNA mismatch repair protein MutL [uncultured prokaryote]
Length = 564
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 91/195 (46%), Gaps = 29/195 (14%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLS---QSTVLNQQPLLRPLKLDLT 673
++VIGQ +I+ + L+++DQHAA E+ +E L Q L QPLL P+ +D+
Sbjct: 376 LRVIGQIQACYIVAEGPDGLYLLDQHAAHERVLYEALQAQRQKGPLPAQPLLEPVVMDVL 435
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVK-DLISTLA 732
PEE MD+ LEE+ L GL FR++ FG V+ + +
Sbjct: 436 PEE-------MDL-------LEENRSLLEGLGFRIE--------PFGPRSVRLQAVPAVL 473
Query: 733 DNQGECSIISSYKMDTADSVCP--SRVRAMLASRAC-RSSIMIGDALGRNEMQKILEHLA 789
+ S+ +D +S P + A L C R+++ G L +M ++ L
Sbjct: 474 SAEAILSVFQDLLLDLHESRRPLEGALEARLIRSICKRAAVKAGQVLSMEQMHHLVRALE 533
Query: 790 DLNSPWNCPHGRPTM 804
PW CPHGRPT+
Sbjct: 534 QCAMPWTCPHGRPTV 548
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 44/61 (72%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR ++ G+V +I AG+V++ +S VKELVEN+LDAGA+ IE+ + G +V DNGCG
Sbjct: 5 IRILDPGLVAQIAAGEVVERPASVVKELVENALDAGASWIEVETEGGGRRRIRVADNGCG 64
Query: 72 I 72
I
Sbjct: 65 I 65
>gi|225567943|ref|ZP_03776968.1| hypothetical protein CLOHYLEM_04016 [Clostridium hylemonae DSM
15053]
gi|225163231|gb|EEG75850.1| hypothetical protein CLOHYLEM_04016 [Clostridium hylemonae DSM
15053]
Length = 695
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 99/202 (49%), Gaps = 20/202 (9%)
Query: 606 ERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERL---SQSTVLNQQ 662
E+ +E K++GQ + I + L+I+DQHAA E+ +ER ++ Q
Sbjct: 495 EKFLDRERKAEYKLVGQVFDTYWIVEFHDSLYIIDQHAAHERVLYERTLKNMKTREFTSQ 554
Query: 663 PLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVE 722
+ P+ LDLT +E + +M+M+ K GF +EE F + ++ V
Sbjct: 555 YISPPIILDLTMQEAELLTMYMEQFTKVGFEIEE----------------FGQD-SYAVR 597
Query: 723 DVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQ 782
V D + ++A + +I S + + ++ P + +AS +C++++ L E+
Sbjct: 598 AVPDNLFSIAKKELLMEMIDSLSDEISRTLSPDLIDEKVASMSCKAAVKGNMKLSAAEVD 657
Query: 783 KILEHLADLNSPWNCPHGRPTM 804
++ L L +P++CPHGRPT+
Sbjct: 658 TLINELLMLENPYHCPHGRPTI 679
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 45/61 (73%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ +++ + +I AG+VI+ +S VKEL EN++DAGATSI + +KE G + ++ DNGCG
Sbjct: 4 IQVLDQVTIDKIAAGEVIERPASVVKELAENAIDAGATSITVEIKEGGISFIRIADNGCG 63
Query: 72 I 72
I
Sbjct: 64 I 64
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 66/130 (50%), Gaps = 6/130 (4%)
Query: 112 LKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSG-RNLGDRQYF 170
+ T G+ SLKD I V+G I L V ++ K+ GFL KP G RN + +
Sbjct: 197 VHTSGNGSLKDVIYHVYGREIAANLLAVNYERT-GMKITGFLGKPLISRGNRNFEN---Y 252
Query: 171 FVNDRPVDLPKVSKLVNELYKGAN-SRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDEC 229
F+N R V ++K + + YK +YP +++ + DVNV P K ++ F+++
Sbjct: 253 FINGRYVKSNMIAKAIEDAYKDFTMQHKYPFVVLHMEIDGEHIDVNVHPTKMELRFNNQQ 312
Query: 230 SILHALREGL 239
+ +++ E +
Sbjct: 313 DVYNSVYEAV 322
>gi|448450247|ref|ZP_21592146.1| DNA mismatch repair protein MutL [Halorubrum litoreum JCM 13561]
gi|445812099|gb|EMA62095.1| DNA mismatch repair protein MutL [Halorubrum litoreum JCM 13561]
Length = 767
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 107/233 (45%), Gaps = 24/233 (10%)
Query: 581 ATLELSQPENEERKA---RALAAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLF 637
A+ + ++P R A R L TE ER F + ++V+GQ + +++ + L
Sbjct: 531 ASEDATRPTARTRPATRQRTLDGDGTESERGF--DSLPSLRVLGQLHETYVVAEAPDGLV 588
Query: 638 IVDQHAADEKYNFERLSQSTV--LNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLE 695
++DQHAADE+ N+ERL + + Q L P++++LT E + +D + + GF E
Sbjct: 589 LIDQHAADERVNYERLKAAFADGADAQALAEPVRIELTAREAALFEEFVDDLSEIGFRAE 648
Query: 696 EDPHALAGLR-FRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCP 754
AG R + AVP + ++D++S L D+ D
Sbjct: 649 R-----AGDREVAVTAVPAVFDAALDPDLLRDVLSALVDDAA-----------AGDEPVA 692
Query: 755 SRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHL 807
V +LA AC S+ +L + +L+ L +P+ CPHGRP + L
Sbjct: 693 DVVDELLADLACYPSVTGNTSLTEGRVVDLLDRLDACENPYACPHGRPVVIRL 745
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 46/70 (65%)
Query: 10 PTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNG 69
P I +++ V RI AG+V++ +S VKELVENSLDAGA+ + ++++ G E +V D+G
Sbjct: 4 PDIERLDERTVQRIAAGEVVERPASVVKELVENSLDAGASRVAVSVESGGTEGIRVRDDG 63
Query: 70 CGISPNNFKV 79
GI + +
Sbjct: 64 VGIPEDQLEA 73
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 61/140 (43%), Gaps = 13/140 (9%)
Query: 112 LKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSC----------KVEGFLSKPGQGSG 161
T+G+ L+ ++ V+G + + V D +V G +S P +
Sbjct: 200 FATEGNGDLRSAVLAVYGREVAESMIDVEWTPEDGLGGEETDAPVRRVSGLVSHPE--TA 257
Query: 162 RNLGDRQYFFVNDRPVDLPKVSKLVNELYKGA-NSRQYPIAIMNFIVPTRACDVNVTPDK 220
R+ D +VN R V + + + Y G +YP A++ VP DVNV P K
Sbjct: 258 RSTRDYLSTYVNGRYVTASALREATLDAYGGQLAPDRYPFAVLFVEVPAGDVDVNVHPRK 317
Query: 221 RKVFFSDECSILHALREGLQ 240
+V F +E ++ A+ + ++
Sbjct: 318 LEVRFDEEPAVRSAVEDAVE 337
>gi|358063955|ref|ZP_09150551.1| hypothetical protein HMPREF9473_02614 [Clostridium hathewayi
WAL-18680]
gi|356697824|gb|EHI59388.1| hypothetical protein HMPREF9473_02614 [Clostridium hathewayi
WAL-18680]
Length = 740
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 102/202 (50%), Gaps = 21/202 (10%)
Query: 606 ERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTV---LNQQ 662
E+L + + K+IGQ + + + ++ LFI+DQHAA EK +E+ +S Q
Sbjct: 541 EKLLEPKSREKHKLIGQLFDTYWLVEFNEQLFIIDQHAAHEKVLYEKTIKSLKERDYTSQ 600
Query: 663 PLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVE 722
+ P+ L L+ EE++ H+D GF +E G + ++AVP + E
Sbjct: 601 MINPPIILTLSMNEEILLKKHLDYFTGIGFEIEH----FGGREYAVRAVPGNLFSIAKKE 656
Query: 723 DVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQ 782
+ ++I L+D+ I+S+ P + +AS +C++++ + L E
Sbjct: 657 LLMEMIDGLSDD------IASHN--------PDIIFEKVASMSCKAAVKGNNRLSVMEAN 702
Query: 783 KILEHLADLNSPWNCPHGRPTM 804
++++ L DL +P+ CPHGRPT+
Sbjct: 703 ELIDQLLDLENPYACPHGRPTI 724
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 70/150 (46%), Gaps = 15/150 (10%)
Query: 95 VRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLS 154
+RF+ N L T G+ +LKD I TVFG I L PV + K D ++ GF
Sbjct: 187 IRFIQNNQNK-------LHTSGNHNLKDIIYTVFGREIAANLLPVEV-KQDILQIRGFAG 238
Query: 155 KPGQGSGRNLGDRQY--FFVNDRPVDLPKVSKLVNELYKG-ANSRQYPIAIMNFIVPTRA 211
KP G+R Y +++N R + V+K + E YK +YP +++ +
Sbjct: 239 KPVIAR----GNRNYENYYINGRYIKSNVVAKAIEEAYKPFMMQHKYPFTLLHLTIEPEY 294
Query: 212 CDVNVTPDKRKVFFSDECSILHALREGLQE 241
DVNV P K ++ F + I + + + +
Sbjct: 295 LDVNVHPTKMELRFREGERIYRMIYQAVSD 324
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 53/82 (64%), Gaps = 2/82 (2%)
Query: 10 PTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNG 69
P I +++ +++I AG+VI+ +S VKEL+EN++DA AT++ + +++ G +V DNG
Sbjct: 2 PRITVLDEHTINKIAAGEVIERPASVVKELLENAIDAQATAVTVEIRDGGTSLIRVTDNG 61
Query: 70 CGISPNNFKVRAVFLCQAYALI 91
CGI + +V FL A + I
Sbjct: 62 CGIPKD--EVGLAFLPHATSKI 81
>gi|377831894|ref|ZP_09814859.1| DNA mismatch repair protein mutL [Lactobacillus mucosae LM1]
gi|377554272|gb|EHT15986.1| DNA mismatch repair protein mutL [Lactobacillus mucosae LM1]
Length = 658
Score = 84.0 bits (206), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 115/249 (46%), Gaps = 36/249 (14%)
Query: 583 LELSQPENEERKARALA-----AATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLF 637
+ +SQP + K +A A E +R F ++ + Q++ F++ + L+
Sbjct: 422 ISISQPTKADVKTEEMALDIDDAGDQENQR------FPDLQYLAQYHGTFLLAQASDGLY 475
Query: 638 IVDQHAADEKYNFERLSQS---TVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSL 694
+VDQHAA E+ NFER +QQ L PL L + E + S H+DI+ NG L
Sbjct: 476 LVDQHAAQERINFERFRHEIGEVGHDQQAFLTPLVLSFSTAEALKISEHLDIL--NGVDL 533
Query: 695 EEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCP 754
+P F + S+ T+ VE ++ + +I DT V
Sbjct: 534 HLEP-------FGQNSFVLSEHPTWFVEGQEEATAK--------EMIDWILSDTELGVAH 578
Query: 755 SRVR-AMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRP-TMRHL-VDLT 811
R++ AM+ S C+ +I L + + +LE LA +P+NCPHGRP T+R DL
Sbjct: 579 FRLKTAMMMS--CKRAIKANHHLDNQQAKALLERLAQCQNPFNCPHGRPVTIRFTDTDLE 636
Query: 812 TIRKNIDEN 820
+ K I ++
Sbjct: 637 KLFKRIQDH 645
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 46/74 (62%), Gaps = 4/74 (5%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I ++ + ++I AG+VI+ SS VKELVEN+LDA + I++ + E G +V+D+G G
Sbjct: 4 IHQLSSILANQIAAGEVIERPSSIVKELVENALDAHSHRIDVVVTEAGLGSIRVIDDGDG 63
Query: 72 IS----PNNFKVRA 81
I+ P FK A
Sbjct: 64 IARSDVPMAFKRHA 77
>gi|448374970|ref|ZP_21558687.1| DNA mismatch repair protein mutL [Halovivax asiaticus JCM 14624]
gi|445659431|gb|ELZ12237.1| DNA mismatch repair protein mutL [Halovivax asiaticus JCM 14624]
Length = 763
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 106/230 (46%), Gaps = 19/230 (8%)
Query: 596 RALAAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQ 655
R L E+E + E R++V+GQ + + + + L ++DQHAADE+ N+ERL +
Sbjct: 548 RTLTGDVAEIEGEY--ETLPRLRVLGQLHDTYFVCETPDGLALIDQHAADERVNYERLQR 605
Query: 656 STVLN--QQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPF 713
+ N Q L P++L+LT E + D + + GF + + + AVP
Sbjct: 606 AVAENPAAQALADPVELELTAAESAAFADVADALSQLGFRADR----VEERTIAVTAVPA 661
Query: 714 SKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIG 773
T ++D+++ + G + +T D++ L AC SI
Sbjct: 662 VFDETLDPAQLRDVLAAIVTGDG------ASGAETVDAMADE----FLGDLACYPSITGN 711
Query: 774 DALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKNIDENGAG 823
+L ++ +L+ L D +P+ CPHGRP + H +D T I + + G
Sbjct: 712 TSLHEGSVRDLLDALDDCRNPYACPHGRPVIVH-IDETEIEDRFERDYPG 760
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 46/68 (67%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I +++ V RI AG+V++ +SAVKELVENSLDA AT I++ ++ G E +V D+G G
Sbjct: 9 IHQLDEDTVARIAAGEVVERPASAVKELVENSLDADATRIDVTVESGGTELIRVADDGQG 68
Query: 72 ISPNNFKV 79
+S + +
Sbjct: 69 MSEADLRA 76
Score = 47.0 bits (110), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 69/172 (40%), Gaps = 24/172 (13%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSD-----SCKVEGFLSKPGQGSGRNLG 165
V T G L+ +++V+G + + V D V G +S P N
Sbjct: 221 VFATTGQDDLQAAVLSVYGREVAASMIAVEASGDDLPPGPVESVSGLVSHPET----NRS 276
Query: 166 DRQYF--FVNDRPVDLPKVSKLVNELYKGA-NSRQYPIAIMNFIVPTRACDVNVTPDKRK 222
R+Y +VN R + + + + Y + +YP + VP A DVNV P KR+
Sbjct: 277 TREYLATYVNGRAITADAIREGIVGAYGTQLGTDRYPFVVCFLSVPGEAVDVNVHPRKRE 336
Query: 223 VFFSD--------ECSILHALRE-GLQEIYSPNNASYSVNKVEQLIEPEKSG 265
V F D + ++ AL E GL +P S E +EPE G
Sbjct: 337 VRFDDADAVRRQVDSAVESALLEHGLLRSGAPRGRS---KPDETQVEPESPG 385
>gi|197117368|ref|YP_002137795.1| DNA mismatch repair protein [Geobacter bemidjiensis Bem]
gi|238690886|sp|B5EGD4.1|MUTL_GEOBB RecName: Full=DNA mismatch repair protein MutL
gi|197086728|gb|ACH37999.1| DNA mismatch repair protein MutL [Geobacter bemidjiensis Bem]
Length = 647
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 92/197 (46%), Gaps = 20/197 (10%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTV---LNQQPLLRPLKL 670
F + VIGQFN +I+ + DL ++DQHAA E+ FE+L ++ Q LL P +
Sbjct: 456 FSSLGVIGQFNASYILCQRGTDLVLIDQHAAHERVAFEKLKGQFAGREVDSQGLLFPETM 515
Query: 671 DLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIST 730
+ + E V H+ + + GF EE G + LK VP T V+ ++D++
Sbjct: 516 EFSFRESAVLREHLAELARLGFEFEE----FGGNTWLLKGVPQVLSATRYVDTIRDILEE 571
Query: 731 LADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLAD 790
L G S ++ D +LA AC S + L + E+ + + + +
Sbjct: 572 L----GSLSRSRAFSDIQED---------LLARIACHSVVRGKRTLSQVEITALFKQMDE 618
Query: 791 LNSPWNCPHGRPTMRHL 807
+ NCPHGRP M+ L
Sbjct: 619 TDFSSNCPHGRPVMQTL 635
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 43/65 (66%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR + + + ++I AG+V++ +S KELVEN+LDAG+ + + ++ G +V D GCG
Sbjct: 5 IRILPENLTNKIAAGEVVERPASVAKELVENALDAGSKEVVVEIESGGRRLIKVSDTGCG 64
Query: 72 ISPNN 76
+S ++
Sbjct: 65 MSRDD 69
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 70/149 (46%), Gaps = 10/149 (6%)
Query: 95 VRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLS 154
VRF T KN VV + + LK+ + T+ G +I + L PV+ + KV G ++
Sbjct: 186 VRF-----TYKNDGKVVFRAL-DADLKERVATMLGRSIASFLYPVSY-QEGGLKVSGLVA 238
Query: 155 KPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSR-QYPIAIMNFIVPTRACD 213
P R+ G Y ++N R + V + + Y+ R +YP+ + + D
Sbjct: 239 APE--CSRSAGSHLYTYINGRFIKDKVVQHAILQAYRNFLERGRYPVVAVFIEIAPGEVD 296
Query: 214 VNVTPDKRKVFFSDECSILHALREGLQEI 242
VNV P K +V F ++ + A++ ++ +
Sbjct: 297 VNVHPTKHEVRFREQGRVHDAIQNAVESV 325
>gi|309775010|ref|ZP_07670025.1| DNA mismatch repair protein HexB [Erysipelotrichaceae bacterium
3_1_53]
gi|308917228|gb|EFP62953.1| DNA mismatch repair protein HexB [Erysipelotrichaceae bacterium
3_1_53]
Length = 708
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 106/204 (51%), Gaps = 23/204 (11%)
Query: 616 RMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPE 675
+++VIGQF+ +I+ + ++ L+I+DQHAA E+Y++E + ++ +L+ +PL L +T E
Sbjct: 520 QLRVIGQFHNCYILAEGEKGLYIIDQHAAQERYHYE-IIRNQILSGNTDTQPLLLPITIE 578
Query: 676 EEVVASMHMD----IIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTL 731
+ A ++ ++ + G LE F + +P K VE+ L
Sbjct: 579 STISAVSQVEELNGLLEQIGIHLE----VFGDHTFVCRQLPLWMK---DVEEEAFL---- 627
Query: 732 ADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADL 791
C +I ++ D S+ R A +A+ AC SSI +L EM+++++ L
Sbjct: 628 ------CDMIDIWEKDKEISLDKLRKHA-IATMACHSSIRFNRSLTLEEMKRVVDDLGRC 680
Query: 792 NSPWNCPHGRPTMRHLVDLTTIRK 815
P++CPHGRPTM + D I++
Sbjct: 681 EQPFHCPHGRPTMICMEDKALIKE 704
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 81/166 (48%), Gaps = 19/166 (11%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICK 143
+ Q +AL + F C + G+ V KT+GS +L + ++ ++G + + +A+
Sbjct: 172 VVQKFALSHPDIGF-CLSHDGRTV----FKTKGSGNLLEVLMQIYGRD--SAKSAIALDG 224
Query: 144 SDS-CKVEGFLSKPGQGSGRNLGDRQY--FFVNDRPVDLPKVSKLVNELYKGANSRQ-YP 199
SD K++G++ +P N + Y ++N R + + K + + Y ++ YP
Sbjct: 225 SDQDYKIKGYIMQPQ----FNRATKYYMLLYINGRMIRNYHLQKAILDAYSPYMPKERYP 280
Query: 200 IAIMNFIVPTRACDVNVTPDKRKVFFSDECS----ILHALREGLQE 241
I +++ I+ + DVNV P K ++ S E + +R+ LQE
Sbjct: 281 IVVIDLIMDAQLVDVNVHPSKWEIRLSKEKQLEKLLYETIRKALQE 326
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 38/61 (62%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I +++ + + I AG+V++ VKEL+EN +DA A ++EI + + G ++D+G G
Sbjct: 4 INRLDEHLSNMIAAGEVVERPQGIVKELIENCIDAHAETVEIQISQGGIASITIIDDGDG 63
Query: 72 I 72
+
Sbjct: 64 M 64
>gi|1304124|dbj|BAA07513.1| PMS7 [Homo sapiens]
gi|1407580|dbj|BAA07474.1| hPMS7 [Homo sapiens]
Length = 161
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/120 (39%), Positives = 75/120 (62%), Gaps = 4/120 (3%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
I+PI++ VH+IC+G V+ LS+AVK++VENSLDAGAT+I++ LK+YG + +V NGC
Sbjct: 3 AIKPIDRKSVHQICSGPVVLSLSTAVKKMVENSLDAGATNIDLKLKDYGMDLIEVSGNGC 62
Query: 71 GISPNNFK--VRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVF 128
G+ NF+ + + FL Y G+ + C T GK+ + T S ++ +I+ +
Sbjct: 63 GVEEENFEGLMMSPFLPATYRR-RLGLDW-CLITMGKSSRKPPTPTPEDHSQREAVISTY 120
>gi|304438412|ref|ZP_07398352.1| DNA mismatch repair protein MutL [Selenomonas sp. oral taxon 149
str. 67H29BP]
gi|304368495|gb|EFM22180.1| DNA mismatch repair protein MutL [Selenomonas sp. oral taxon 149
str. 67H29BP]
Length = 622
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 95/193 (49%), Gaps = 25/193 (12%)
Query: 616 RMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQST--VLNQQPLLRPLKLDLT 673
RM IGQ +L +II + L+I+DQHAA E+ F+R S T + +QQ L+ + L
Sbjct: 432 RMLPIGQVDLTYIIAQSTATLYIIDQHAAHERILFDRFSAQTDGIPSQQMLVHAI-LSFD 490
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLR-FRLKAVPFSKKITFGVEDVKDLISTLA 732
E + ++ + GF LE AG R +RL P +++++++L
Sbjct: 491 AHEAQYIEENAELFDRLGFHLEA-----AGERTYRLTETPADVPTKEAEGIIREILASLG 545
Query: 733 DNQGECSIISSYKMDTADSVCPSRVR-AMLASRACRSSIMIGDALGRNEMQKILEHLADL 791
D + P+ +R A +A+ ACR++I G+ L +M+ +LE L
Sbjct: 546 DLH---------------TATPANLREAGIATMACRAAIKAGEELSIRQMEILLEELRAT 590
Query: 792 NSPWNCPHGRPTM 804
P+ CPHGRPT+
Sbjct: 591 PFPFTCPHGRPTI 603
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 54/93 (58%), Gaps = 2/93 (2%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I ++ +++I AG+V++ +S VKELVEN++DAGAT++E+ + G + +V DNG G
Sbjct: 4 IHVLDDATINKIAAGEVVERPASVVKELVENAMDAGATAVEVEIMGGGTSFIRVTDNGRG 63
Query: 72 ISPNNFKVRAVFLCQAYALIAKGVRFVCTNTTG 104
++ + RA L A + IA T G
Sbjct: 64 MTGED--ARAAILRHATSKIAAASDLETIATLG 94
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 67/136 (49%), Gaps = 4/136 (2%)
Query: 106 NVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDS-CKVEGFLSKPGQGSGRNL 164
N + + T G L I +++G + + L P+ + ++ G++SKP R+
Sbjct: 191 NNNRMTIMTAGDGDLARTIGSIYGGDAASALIPLDFYDDAADIRITGYISKPSLI--RSS 248
Query: 165 GDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQ-YPIAIMNFIVPTRACDVNVTPDKRKV 223
Q + VN R + ++K ++ +Y+ + +P+A++ VP R DVNV P K ++
Sbjct: 249 RAWQTYIVNGRTIQNRAIAKAIDNVYRSLVPKMGFPLAVIVITVPQRTIDVNVHPQKTEM 308
Query: 224 FFSDECSILHALREGL 239
F DE I A+ + +
Sbjct: 309 KFEDEGRIFKAVYKAV 324
>gi|304440468|ref|ZP_07400357.1| DNA mismatch repair protein MutL [Peptoniphilus duerdenii ATCC
BAA-1640]
gi|304371220|gb|EFM24837.1| DNA mismatch repair protein MutL [Peptoniphilus duerdenii ATCC
BAA-1640]
Length = 630
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 96/190 (50%), Gaps = 29/190 (15%)
Query: 623 FNLGFIIGKLDQDLFIVDQHAADEKYNFERLS---QSTVLNQQPLLRPLKLDLTPEEEVV 679
F I + +IVDQHAA E+ N+E+ + + +Q LL PL +++T EE V
Sbjct: 454 FKTYLIFESYEDKFYIVDQHAAHERINYEKFKREFEEKSIERQVLLSPLLVEVTSEERKV 513
Query: 680 ASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVP--FSKKITFGVEDVKDLISTLADNQGE 737
+ + ++ GF EE F L+ +P F K G + +L+S DN
Sbjct: 514 LLENTENLKNLGFYFEE----FGEKSFLLREIPIIFGKPSGLGF--IHELLSDSYDNL-- 565
Query: 738 CSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNC 797
YK+D P ++ ++AC++S+ GD+L E++++++ L++ ++P C
Sbjct: 566 ------YKVD------PYKI----MTKACKASVKAGDSLSIEEIKELIKLLSNCDNPLTC 609
Query: 798 PHGRPTMRHL 807
PHGRPT+ L
Sbjct: 610 PHGRPTILEL 619
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I +++ V +I AG++I++ +S VKEL+ENS+DAGA +I + +K+ + +V D+G G
Sbjct: 2 INILDEYTVSKIAAGEIIENPASIVKELLENSIDAGAKNITVEVKDGAANYLRVSDDGSG 61
Query: 72 ISPNNFKVRAVFLCQA 87
I ++ K FL A
Sbjct: 62 IEKDDLKY--AFLRHA 75
Score = 48.5 bits (114), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 75/145 (51%), Gaps = 4/145 (2%)
Query: 110 VVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQY 169
VV+ + + +LK++I +V G +I L + + + K++GF+S R+ + +Y
Sbjct: 193 VVVSSIANENLKNHIHSVLGSDITRNLVEIE-HEEEGYKIKGFIS--NNMLYRSTRNHEY 249
Query: 170 FFVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDE 228
FVN R V ++++ + + YK ++P+ ++ + + DVN+ P K ++ S+E
Sbjct: 250 LFVNGRFVKNLEIARAIEKSYKSLIPLNRFPVYLLYIEIDPKLVDVNIHPKKHEIKLSNE 309
Query: 229 CSILHALREGLQEIYSPNNASYSVN 253
++ L ++E N + + VN
Sbjct: 310 NRLIEILDMLVREKLYKNTSIFKVN 334
>gi|406927216|gb|EKD63280.1| hypothetical protein ACD_51C00304G0003 [uncultured bacterium]
Length = 573
Score = 83.6 bits (205), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 105/229 (45%), Gaps = 37/229 (16%)
Query: 591 EERKARALAAATTELERLFRKEDFG----------RMKVIGQFNLGFIIGKLDQDLFIVD 640
EER R + +E R++ FG ++K I Q +I+ + ++ + I+D
Sbjct: 350 EERSPRGI---KEHIEDENRQDSFGVFQKGRIEEPKLKPIQQIANSYILAQDEEGVVIID 406
Query: 641 QHAADEKYNFERLSQSTV---LNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEED 697
QHAA E+ +E+L + QPLL P+ ++L+ +E ++ ++ + GF++E
Sbjct: 407 QHAAHERVMYEKLMSALAEKSATSQPLLAPMSVELSLQETETLGENISVLEEIGFAIE-- 464
Query: 698 PHALAGLRFRLKAVPFSKKITFGVEDV--KDLISTLADNQGECSIISSYKMDTADSVCPS 755
+ G F + AVP D+ KD++S +I D S
Sbjct: 465 --SFGGNTFLISAVP---------SDIAGKDIVSIFK------GVIDDLINDGRSDELQS 507
Query: 756 RVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTM 804
R +L ACRS++ G L E +L L++++ CPHGRPTM
Sbjct: 508 RREHLLHYAACRSAVKFGQKLSYEEQAGLLAQLSEIDRKETCPHGRPTM 556
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 55/115 (47%), Gaps = 20/115 (17%)
Query: 19 VVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNN-- 76
+V++I AG+VI+ +S VKELVENSLDA +T I + G E + DNG GI +
Sbjct: 11 LVNQIAAGEVIERPASVVKELVENSLDALSTDITCEIVSGGLEAIIITDNGSGIEREDAK 70
Query: 77 -----------------FKVRAV-FLCQAYALIAKGVRFVCTNTTGKNVKSVVLK 113
F ++ + F +A A IA + TG ++ V LK
Sbjct: 71 TAWERHATSKISSQDDLFSIKTLGFRGEALASIASVSQVEMETKTGSDMSGVFLK 125
>gi|218132527|ref|ZP_03461331.1| hypothetical protein BACPEC_00386 [[Bacteroides] pectinophilus ATCC
43243]
gi|217992637|gb|EEC58639.1| DNA mismatch repair domain protein [[Bacteroides] pectinophilus
ATCC 43243]
Length = 644
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 95/189 (50%), Gaps = 20/189 (10%)
Query: 619 VIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLS---QSTVLNQQPLLRPLKLDLTPE 675
++GQ + I + + +FI+DQHAA EK +ER +S ++ Q + P+ L L
Sbjct: 457 LVGQVFDTYWIIQFEDKMFIMDQHAAHEKILYERTMHRLESGSIDTQIIAPPVILSLNMR 516
Query: 676 EEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQ 735
E+ V S ++DI + GF +E + G +++ +P + + +L D +
Sbjct: 517 EKEVVSQNIDIFTRLGFEIE----SFGGNEYKVTGMPAT-------------LPSLDDRE 559
Query: 736 GECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPW 795
II S + S P + +AS +C++++ + E Q ++E L + ++P+
Sbjct: 560 LLMDIIDSLMEEGGASSKPELITQRVASMSCKAAVKGNMRMSFAEAQNLVEELMNADNPY 619
Query: 796 NCPHGRPTM 804
NCPHGRPT+
Sbjct: 620 NCPHGRPTL 628
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 56/93 (60%), Gaps = 2/93 (2%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ +++ +++I AG+VI+ +S VKEL EN++DA AT++ I +K+ G + ++ DNGCG
Sbjct: 3 IQILDQNTINKIAAGEVIERPASVVKELAENAIDAMATAVTIEIKDGGISFIRITDNGCG 62
Query: 72 ISPNNFKVRAVFLCQAYALIAKGVRFVCTNTTG 104
I ++ FL + + I +C + G
Sbjct: 63 IDKG--EIPMAFLRHSTSKIKSVEDLMCVRSLG 93
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 67/135 (49%), Gaps = 12/135 (8%)
Query: 112 LKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQY-- 169
L T G+ SLKD I V G +I L V+ K+ ++ GF+ KP G +R Y
Sbjct: 196 LYTSGNGSLKDIIYHVNGRDIATNLLEVS-AKTQDIQISGFIGKPMISRG----NRTYEN 250
Query: 170 FFVNDRPVDLPKVSKLVNELYKGA-NSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDE 228
+F+N R + +++ + E YKG QYP ++F + DVNV P K ++ FS
Sbjct: 251 YFINGRYIKSNIITRAIEEGYKGYIMQHQYPFTALHFTIEQSIIDVNVHPTKMELRFSQN 310
Query: 229 ----CSILHALREGL 239
+L+A+R L
Sbjct: 311 EFVYDFVLNAIRNTL 325
>gi|298246052|ref|ZP_06969858.1| DNA mismatch repair protein MutL [Ktedonobacter racemifer DSM
44963]
gi|297553533|gb|EFH87398.1| DNA mismatch repair protein MutL [Ktedonobacter racemifer DSM
44963]
Length = 755
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 102/201 (50%), Gaps = 28/201 (13%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERL-----SQSTVLNQQPLLRPL 668
F R++V+GQ + +++ + ++++DQHAA E+ ER+ S+ T+ Q LL P+
Sbjct: 564 FPRLRVVGQLSQSYVVTEGPDGMYLIDQHAAHERIVLERMVASLKSRETI--SQLLLTPM 621
Query: 669 KLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVP--FSKKITFGVEDVKD 726
L L P E H + +R+ GF LE + G ++AVP K++ D
Sbjct: 622 HLTLAPVEIEAVEEHGEQLRRIGFELE----VVDGKTVEVRAVPTVLVKRL-----DSVS 672
Query: 727 LISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILE 786
L + L + E + + + RA LA+ AC+++I L +EM+++LE
Sbjct: 673 LHALLVELTAEDQLGHTETWEE---------RA-LANVACKAAIKQNYFLAMSEMREMLE 722
Query: 787 HLADLNSPWNCPHGRPTMRHL 807
L + +P++C HGRPTM H
Sbjct: 723 QLEQVKAPFSCCHGRPTMVHF 743
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 43/66 (65%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR + V +I AG+V++ +S VKEL+ENS+DAGAT I + L G + +V DNGCG
Sbjct: 3 IRQLAPDVAAKIAAGEVVERPASVVKELIENSIDAGATQIRVDLMNGGLQLIRVTDNGCG 62
Query: 72 ISPNNF 77
ISP
Sbjct: 63 ISPEEL 68
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 83/186 (44%), Gaps = 31/186 (16%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVA--- 140
L + YAL +RF + GK + S T G L ++ V+G+ I + V
Sbjct: 173 LLEQYALAYPEIRFTVA-SEGKQIFS----TPGDGKLFSVLVQVYGLQIAEQMVEVDGDD 227
Query: 141 ---ICKSDSCKVEGFLSKPGQGSGRNLGDRQY--FFVNDRPVDLPKVSKLVNELYKGAN- 194
+ V+GF+S+P RQ+ FFVN R V +S+++ +GA
Sbjct: 228 EHDASDGEYPIVKGFVSRPACYKS----TRQHISFFVNRRWV----MSRMLTTAVEGAYH 279
Query: 195 ----SRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDE----CSILHALREG-LQEIYSP 245
S ++P+A++N + DVNV P K ++ F E +IL A R+ LQE P
Sbjct: 280 SLLLSGRHPLAVINIQIDPSFLDVNVHPAKTEIRFLKERRVFAAILRAARKALLQEPEMP 339
Query: 246 NNASYS 251
S S
Sbjct: 340 QWKSKS 345
>gi|339443300|ref|YP_004709305.1| DNA mismatch repair enzyme [Clostridium sp. SY8519]
gi|338902701|dbj|BAK48203.1| DNA mismatch repair enzyme [Clostridium sp. SY8519]
Length = 673
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 96/202 (47%), Gaps = 21/202 (10%)
Query: 606 ERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQ---Q 662
E+L ++ +++GQ + + + + L+IVDQHAA EK +ER Q+ Q Q
Sbjct: 474 EKLLSRQARPNYRILGQLFETYWLLEYNDHLYIVDQHAAHEKVLYERTMQAFQTRQFYAQ 533
Query: 663 PLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVE 722
+ P+ LDLT +E+ + + GF LE + ++ +P + G E
Sbjct: 534 LISPPMILDLTIQEQELMDRFHGYFEEMGFELE----PFGDGAWAVRGIPANLFQLNGKE 589
Query: 723 DVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQ 782
LI L+D DS P+ VR +AS +C++++ L R E +
Sbjct: 590 LFLALIDELSD--------------LPDSEAPAVVREKIASMSCKAAVKGNQNLSRPEAE 635
Query: 783 KILEHLADLNSPWNCPHGRPTM 804
K+L+ L L +P+ CPHGRP +
Sbjct: 636 KLLDELLTLENPYFCPHGRPVI 657
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 44/63 (69%)
Query: 10 PTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNG 69
P I +++ + +I AG+V+ SS VKELVEN++DAGAT++ I +++ G ++ DNG
Sbjct: 2 PQIELLDQQTIDKIAAGEVVDRPSSVVKELVENAIDAGATAVTIEIQDGGSSMIRITDNG 61
Query: 70 CGI 72
CGI
Sbjct: 62 CGI 64
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 64/128 (50%), Gaps = 6/128 (4%)
Query: 112 LKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSG-RNLGDRQYF 170
L T G+ LKD I ++G +I L P++ + V G++ KP G RN + +
Sbjct: 197 LHTSGNGELKDIIYQIYGRSIAGNLLPLS-GTFEHFSVSGYIGKPLISRGNRNF---ETY 252
Query: 171 FVNDRPVDLPKVSKLVNELYKG-ANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDEC 229
FVN R + ++K + + Y G ++P+ +++ + R DVNV P+K ++ S +
Sbjct: 253 FVNGRYIRSKLLAKAIEDGYHGFLMQHKFPLTVLHLSIDGRMVDVNVHPNKMEMRISGQE 312
Query: 230 SILHALRE 237
I + E
Sbjct: 313 EIYRQISE 320
>gi|375089306|ref|ZP_09735633.1| DNA mismatch repair protein MutL [Facklamia languida CCUG 37842]
gi|374567082|gb|EHR38313.1| DNA mismatch repair protein MutL [Facklamia languida CCUG 37842]
Length = 622
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 93/195 (47%), Gaps = 22/195 (11%)
Query: 613 DFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERL--SQSTVLNQQPLLRPLKL 670
DF ++ +GQ + +++ + + +++DQHAA E+ +ERL + V QQ LL PL
Sbjct: 421 DFRSLRYVGQIHGTYLVAESPEGFYLIDQHAAQERLRYERLMAEDTLVTQQQTLLVPLVF 480
Query: 671 DLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIST 730
+ + H D + G L+ A ++L A P I V+++ LI
Sbjct: 481 EFDARMVQLLEDHQDRLEALGIDLQ----AFGPRTYQLNAYP----IWLEVDELDHLIPD 532
Query: 731 LADNQGECSIISSYKMDTADSVCPSRVR-AMLASRACRSSIMIGDALGRNEMQKILEHLA 789
L + +MD ++ +++R A + ++CR +I AL R E ++E +
Sbjct: 533 LIE-----------RMDREPNLTINQLREASIVMQSCRGAIKANQALSREEATTLIEAMQ 581
Query: 790 DLNSPWNCPHGRPTM 804
L P++CPHGRP
Sbjct: 582 TLEDPYHCPHGRPVF 596
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ ++ + ++I AG+V++ +S VKELVEN++DA A +I+I + E G + V DNG G
Sbjct: 4 IKQMSTELANQIAAGEVVERPASVVKELVENAIDAQADTIQIEVVEAGIQKISVTDNGWG 63
Query: 72 ISPNNFKVRAVFLCQA 87
+ + ++ FL A
Sbjct: 64 MDREDLEL--AFLPHA 77
Score = 46.2 bits (108), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 81/169 (47%), Gaps = 10/169 (5%)
Query: 108 KSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAIC-KSDSCKVEGFLSKPGQGSGRNLGD 166
+ VVL+T G +L + I ++ + L +AI +S + + G+LS P R
Sbjct: 197 QKVVLRTSGKKALLETIANLYQPALARQL--IAISGQSRNFNLSGYLSPPQ--VTRTSRA 252
Query: 167 RQYFFVNDRPVDLPKVSKLVNELY-KGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFF 225
++ VN R + P ++ ++ + Y + ++PIA + V R DVNV P K+ V
Sbjct: 253 WIHWMVNGRSIKSPVLTNVLLKAYGRQLMVGRFPIAFLVIEVDPRLVDVNVHPTKQTVRM 312
Query: 226 SDECS----ILHALREGLQEIYSPNNASYSVNKVEQLIEPEKSGPSSGA 270
S E ++ ++ GL ++ + A S+ K QL ++ P +GA
Sbjct: 313 SLEEELADLVVEEVQAGLSQVNTVPEAGESLLKEGQLGPSLETSPPAGA 361
>gi|397779478|ref|YP_006543951.1| DNA mismatch repair protein mutL [Methanoculleus bourgensis MS2]
gi|396937980|emb|CCJ35235.1| DNA mismatch repair protein mutL [Methanoculleus bourgensis MS2]
Length = 586
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 90/191 (47%), Gaps = 21/191 (10%)
Query: 617 MKVIGQFNLGFIIGK-LDQDLFIVDQHAADEKYNFERLSQ--STVLNQQPLLRPLKLDLT 673
MK +GQ +I+ + D L+++DQHAA E+ ++++ + Q L+ P L L
Sbjct: 399 MKPVGQVAATYIVAEGADGTLYLIDQHAAHERILYDQVVERRDATPETQELIMPAVLSLP 458
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
P E M ++ + GF +EE F ++AVP + +ED + T+AD
Sbjct: 459 PRESAALRDAMAVLAEEGFVVEE----FGRDTFAVRAVPAALG---ALEDPGVVRETIAD 511
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNS 793
+ A P R A+ ACR ++ G L ++ +++L LA +
Sbjct: 512 -----------LLTGASRTNPDRREAVTCIVACRGAVKAGVLLTHDQQRRLLAQLARTKT 560
Query: 794 PWNCPHGRPTM 804
PW CPHGRPT+
Sbjct: 561 PWTCPHGRPTV 571
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 61/122 (50%), Gaps = 4/122 (3%)
Query: 112 LKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFF 171
+ TQ S L + I ++G ++ L P+ ++ ++ G+LS+P + G + +
Sbjct: 203 MATQRSGGLLNAIAGLYGADLARTLIPID-ARTPLLRISGYLSRPSENRGNS--SQVAIS 259
Query: 172 VNDRPVDLPKVSKLVNELYKGANSR-QYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECS 230
+N R + +++ V E Y + +YP+A ++ + DVNV P KR+V S E
Sbjct: 260 INGRSITSRQITAAVREGYGTLLPKDRYPVAFVDLSLEAGLVDVNVHPTKREVRLSRERE 319
Query: 231 IL 232
IL
Sbjct: 320 IL 321
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 6/80 (7%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSI--EIALKEYGEEWFQVVDNG 69
I+ ++ V++I AG+V++ +S VKEL+EN++DAGATSI E++ G +V D+G
Sbjct: 6 IQVLDPDTVNQIAAGEVVERPASVVKELLENAIDAGATSILVEVSSDLAGITMLRVTDDG 65
Query: 70 CGISPNNFKVRAVFLCQAYA 89
G+ P AV Q +A
Sbjct: 66 EGMMPEE----AVLAFQPHA 81
>gi|334340544|ref|YP_004545524.1| DNA mismatch repair protein MutL [Desulfotomaculum ruminis DSM
2154]
gi|334091898|gb|AEG60238.1| DNA mismatch repair protein MutL [Desulfotomaculum ruminis DSM
2154]
Length = 637
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 93/193 (48%), Gaps = 19/193 (9%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTV--LNQQPLLRPLKLD 671
F ++ +GQ +++ + + L+I+DQHAA E+ +E+ + + Q LL P+ LD
Sbjct: 448 FASLRPVGQVFPTYVLAQGEGSLYIIDQHAAHERVFYEKYKEQLTRGVQSQMLLEPVPLD 507
Query: 672 LTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTL 731
+ ++ + GF +E G F L+ VP VE DL+ L
Sbjct: 508 IPYHHLQRLIANVVALSDMGFVVEH----FGGDTFLLRGVP-PGTTEKPVELFMDLLDRL 562
Query: 732 ADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADL 791
D+ E + +S +D + A+ ACR ++ G LG E+Q +LE L+
Sbjct: 563 QDSPAE-QLDNSLMIDR-----------LAAAMACRDAVKAGTRLGHKEIQSLLEGLSRC 610
Query: 792 NSPWNCPHGRPTM 804
+SP+ CPHGRPT+
Sbjct: 611 HSPYTCPHGRPTL 623
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 46/68 (67%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ +++ ++I AG+V++ S KELVENSLDAGA+ I + L + G +V+DNG G
Sbjct: 4 IQVLDEATANQIAAGEVVERPVSVAKELVENSLDAGASRITVELIQGGLSGIKVIDNGSG 63
Query: 72 ISPNNFKV 79
+SP + K+
Sbjct: 64 MSPEDAKL 71
Score = 44.3 bits (103), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 79/179 (44%), Gaps = 27/179 (15%)
Query: 110 VVLKTQGSSSLKDNIITVFGM-NIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQ 168
V+ + G+ SL+D +VFG N+ + +E + + GF+SKP RQ
Sbjct: 195 VIFCSPGNGSLRDAAASVFGPDNVRSMIE--MNHQGRLLTIRGFISKPVL----TRASRQ 248
Query: 169 Y--FFVNDRPVDLPKVSKLVNELYKG-ANSRQYPIAIMNFIVPTRACDVNVTPDKRKV-- 223
Y F++N R + +S L+ + Y+ + ++P+A+++ + DVNV P K +V
Sbjct: 249 YQNFYINQRYIRSIFISSLLLQAYQTLIPAGRFPLALLHIALDPEQVDVNVHPTKMEVRL 308
Query: 224 ------------FFSDECSILHALREGLQEIYSPNNASYSVNKVEQLIEPE--KSGPSS 268
FS ++ A+ GL E+ A K EPE K PSS
Sbjct: 309 AREKELAEELLEIFSGHLNVPAAV-AGLWEMMPGRKAKPPEEKAPDYKEPEPYKENPSS 366
>gi|320526785|ref|ZP_08027975.1| DNA mismatch repair protein [Solobacterium moorei F0204]
gi|320132753|gb|EFW25293.1| DNA mismatch repair protein [Solobacterium moorei F0204]
Length = 609
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 131/273 (47%), Gaps = 31/273 (11%)
Query: 550 DLRKRRQQRLSIMQSSCHTSGSVKMRRCFAAATLELSQPENEERKARALAAATTELERLF 609
+ RK +Q+R SI++ T K+ + E+++ E E L +T+ E +
Sbjct: 358 EYRKEQQRRQSIVEQVASTPQEEKVEKQEVTLEQEIAETEAE------LKRVSTQFEEEY 411
Query: 610 -----RKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPL 664
+++ F M+VIGQ + FI+ ++ L I+DQHAA E+ ++E LNQ P+
Sbjct: 412 PEYKPQQQVFPPMEVIGQLHEKFILCAAEKGLVIIDQHAAQERVHYEEYKAK--LNQDPV 469
Query: 665 LRPLKLDLTPEEEVVASMHM--DIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVE 722
+ + +T +H D++R+ +EE A+ + + PF K T V
Sbjct: 470 MMDCLVPIT--------IHAGNDLVRR----VEEINAAVEDIHVVFE--PFGKD-TLVVH 514
Query: 723 DVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQ 782
V + + + Q +I +K D D + +A+ AC SI +L +EM+
Sbjct: 515 SVPVWMQDIEEIQFLNDVIDLFKNDR-DIKYARMEKKKIATMACHHSIRFNRSLTMDEMK 573
Query: 783 KILEHLADLNSPWNCPHGRPTMRHLVDLTTIRK 815
+++ L+ +P++CPHGRPT L + T +++
Sbjct: 574 EVVRQLSLCENPYHCPHGRPTFITLDEKTLVKE 606
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 42/65 (64%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ ++ + I AG+V++ VKELVEN++DAG+T IE+ + E G + V+DNGCG
Sbjct: 4 IKQLDTLTANMIAAGEVVERPMGVVKELVENAIDAGSTRIEVNITEGGIQRLSVIDNGCG 63
Query: 72 ISPNN 76
+ +
Sbjct: 64 MDAQD 68
Score = 44.3 bits (103), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 59/126 (46%), Gaps = 14/126 (11%)
Query: 112 LKTQGSSSLKDNIITVFG-MNIYNCLEPVAICKSDSCKVEGFLSKP----GQGSGRNLGD 166
+T G +L + + VFG M N + PV D V+G+L KP +G NL
Sbjct: 195 FRTSGQGNLLEVVYQVFGRMAAENAI-PVDFSDFDYT-VKGYLIKPSITRASRTGMNL-- 250
Query: 167 RQYFFVNDRPVDLPKVSKLVNELYKGANSR-QYPIAIMNFIVPTRACDVNVTPDKRKVFF 225
F+N R V K+ K V + Y+ + +YPI +++ + DVNV P K +V
Sbjct: 251 ----FLNGRMVRTYKLYKAVQDGYEDFIVKGRYPICVLDISMDPHLLDVNVHPSKWEVRL 306
Query: 226 SDECSI 231
S E +
Sbjct: 307 SKEIQL 312
>gi|295094833|emb|CBK83924.1| DNA mismatch repair protein MutL [Coprococcus sp. ART55/1]
Length = 717
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 96/202 (47%), Gaps = 21/202 (10%)
Query: 606 ERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTV---LNQQ 662
E+ KE + ++IGQ + + + D FI+DQHAA EK +E L ++ + Q
Sbjct: 518 EKFLTKEARAKHRLIGQLFKTYWLIEYDGKFFIMDQHAAHEKVKYEELMENYKNKKIYSQ 577
Query: 663 PLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVE 722
L+ P + L+ E +MD+ G+ +E G F+L AVP + FG++
Sbjct: 578 YLMPPAVVTLSAAEIEFLHENMDMFEALGYQIEN----FGGREFKLNAVPDN---LFGLD 630
Query: 723 DVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQ 782
+ I +AD SS K T D+ L++ AC+++I + E
Sbjct: 631 GRELFIDFIADAS------SSAKKVTIDTFIHK-----LSTMACKAAIKGNTEISFKEAD 679
Query: 783 KILEHLADLNSPWNCPHGRPTM 804
+++ L L +P+ CPHGRPT+
Sbjct: 680 ALIDQLLKLENPYTCPHGRPTV 701
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 52/76 (68%), Gaps = 2/76 (2%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ +++ +++I AG+VI+ SS +KELVENS+D+GAT++ + +K G + +V DNG G
Sbjct: 2 IKVLDQNTINKIAAGEVIEKPSSVIKELVENSIDSGATAVTVEVKGGGLSFLRVTDNGAG 61
Query: 72 ISPNNFKVRAVFLCQA 87
I + +V+ FL A
Sbjct: 62 IKKD--EVKLAFLRHA 75
Score = 46.6 bits (109), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 70/136 (51%), Gaps = 14/136 (10%)
Query: 112 LKTQGSSSLKDNIITVFGMNIY-NCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQY- 169
L T G+ L+D I ++G +I N LE A ++D K+ G++++P G +R +
Sbjct: 195 LFTSGNGKLRDIIYHIYGRDITSNLLEINA--ENDYMKISGYIARPCISRG----NRSFE 248
Query: 170 -FFVNDRPVDLPKVSKLVNELYKG-ANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSD 227
++VN R + ++K + + ++ ++P +NF V DVNV P K ++ F++
Sbjct: 249 GYYVNHRYIKSAVLTKAIEDAFRTFVMIHKFPFTEINFQVRPDLLDVNVHPTKMELKFAN 308
Query: 228 ECSI----LHALREGL 239
I +A+RE L
Sbjct: 309 SQDIYSFTYNAIRETL 324
>gi|337743321|gb|AEI73157.1| PMS2 [Kryptolebias marmoratus]
Length = 161
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 56/77 (72%)
Query: 2 DVETPTNSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEE 61
D+ T + IR I+K VH+IC+GQV+ L++AVKEL+ENS+DAGAT+I++ LKE G E
Sbjct: 3 DICTSEPAGAIRAIDKHSVHQICSGQVVLTLATAVKELLENSIDAGATNIDVKLKECGAE 62
Query: 62 WFQVVDNGCGISPNNFK 78
+V DNG G+ NF+
Sbjct: 63 QVEVSDNGKGVEEANFE 79
>gi|448530641|ref|ZP_21620777.1| DNA mismatch repair protein MutL [Halorubrum hochstenium ATCC
700873]
gi|445707818|gb|ELZ59667.1| DNA mismatch repair protein MutL [Halorubrum hochstenium ATCC
700873]
Length = 809
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 594 KARALAAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERL 653
+ R L T ER F + R++++GQ + +++ + L ++DQHAADE+ N+ERL
Sbjct: 589 RQRTLDGEATGSEREF--DSLPRLRILGQLHETYVVAEAPDGLVLIDQHAADERVNYERL 646
Query: 654 SQ--STVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLR-FRLKA 710
+ + Q L P++++LT E + +D + GF E AG R + A
Sbjct: 647 KAVFADGADAQALAEPVRIELTAREAALFEEFVDDLTGIGFRAER-----AGDREVAVTA 701
Query: 711 VPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSI 770
VP + ++D +S L D+ D V +LA AC S+
Sbjct: 702 VPAVFDAALDPDLLRDALSALVDDAA-----------AGDEPVTDAVDELLADLACYPSV 750
Query: 771 MIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHL 807
+L + +L+ L +P+ CPHGRP + L
Sbjct: 751 TGNTSLTEGRVVDLLDRLDGCENPYACPHGRPVVIRL 787
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 45/70 (64%)
Query: 10 PTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNG 69
P I +++ V RI AG+V++ +S VKELVENSLDAGA+ + +++ G E +V D+G
Sbjct: 33 PDIERLDERTVQRIAAGEVVERPASVVKELVENSLDAGASRVAVSVNSGGTEGIRVRDDG 92
Query: 70 CGISPNNFKV 79
GI + +
Sbjct: 93 VGIPSDQLEA 102
Score = 44.3 bits (103), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 61/149 (40%), Gaps = 20/149 (13%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSC-----------------KVEGFL 153
T+G+ L+ ++ V+G + + V D +V G +
Sbjct: 228 TFATEGNGDLRSAVLAVYGREVAESMIDVDWTPEDGGVDRDGSTGAPAGDPAVERVTGLV 287
Query: 154 SKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGA-NSRQYPIAIMNFIVPTRAC 212
S P + R+ D +VN R V + + + Y G +YP A++ VP
Sbjct: 288 SHPE--TARSTRDYLATYVNGRYVTASALREATLDAYGGQLAPDRYPFAVLFVEVPAGDV 345
Query: 213 DVNVTPDKRKVFFSDECSILHALREGLQE 241
DVNV P K +V F +E ++ A+ +++
Sbjct: 346 DVNVHPRKLEVRFDEEPAVRSAVEAAVED 374
>gi|302389748|ref|YP_003825569.1| DNA mismatch repair protein MutL [Thermosediminibacter oceani DSM
16646]
gi|302200376|gb|ADL07946.1| DNA mismatch repair protein MutL [Thermosediminibacter oceani DSM
16646]
Length = 593
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 94/189 (49%), Gaps = 21/189 (11%)
Query: 618 KVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLN--QQPLLRPLKLDLTPE 675
+++GQ +I+ + + + ++VDQHAA E+ +E S L Q L+ P L LT E
Sbjct: 407 RILGQLFETYIVVQGNGEFYLVDQHAAHERILYEYYSCGMDLPVISQELVSPFILKLTFE 466
Query: 676 EEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQ 735
E + D I++ GF +E +++VP+ +++++ L +N
Sbjct: 467 EINFIEENRDFIKRMGFDIE----VFGKDTVLIRSVPYFFNKPVEPASLQEIMDELKEN- 521
Query: 736 GECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPW 795
GE + S K+ LAS AC ++I GD L +EM+++L+ L +P+
Sbjct: 522 GEFRLRSREKI--------------LASMACHTAIKAGDTLSPDEMRELLDQLMRTQNPY 567
Query: 796 NCPHGRPTM 804
CPHGRPTM
Sbjct: 568 TCPHGRPTM 576
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 52/81 (64%), Gaps = 2/81 (2%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ +++ + +I AG++I+ S VKELVENS+DAG+ I + +++ G+ +V+D+G G
Sbjct: 4 IKVLDENISSKIAAGEIIEKPVSVVKELVENSIDAGSRHIFVEIEKGGKSLIKVIDDGEG 63
Query: 72 ISPNNFKVRAVFLCQAYALIA 92
+ P + VR F A + I+
Sbjct: 64 MDPED--VRLAFERHATSKIS 82
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 67/133 (50%), Gaps = 6/133 (4%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKS-DSCKVEGFLSKPGQGSGRNLGDRQY 169
VL T G+ +LK+ I ++G N+ L + I K+ D +++GF+S P G +
Sbjct: 196 VLYTPGNGNLKEVIARIYGFNLAKDL--IHINKTFDFGRIDGFISPPKYTRGNR--SWET 251
Query: 170 FFVNDRPVDLPKVSKLVNELYKGA-NSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDE 228
FFVN R V +S + + Y+ ++PIA + + DVNV P K ++ F E
Sbjct: 252 FFVNGRLVKDRGLSASLEKAYRTLLPGDKFPIAFIKISIDGSLVDVNVHPAKIEIRFQRE 311
Query: 229 CSILHALREGLQE 241
+ AL E ++E
Sbjct: 312 NEVHQALYETVKE 324
>gi|449019622|dbj|BAM83024.1| similar to DNA mismatch repair protein [Cyanidioschyzon merolae
strain 10D]
Length = 658
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 107/218 (49%), Gaps = 44/218 (20%)
Query: 619 VIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQ-----------STVLNQQPLLR- 666
V+GQF+ FI+ ++ ++F++DQHAADE+ FE+L+Q T LN+ LR
Sbjct: 449 VVGQFDAKFIVFRVRSEIFLLDQHAADERARFEQLTQMYQESLDPRKYPTALNRSVSLRV 508
Query: 667 PLKLDLTPEEEVVASMHMDIIRKNGFSLEE-------DPH----ALAGLR----FRLKAV 711
PL +DL +++ +R G+S +E D H A+AG R+++V
Sbjct: 509 PLLVDLG--SRCLSATTCAFLRHFGWSWDEASSEKPIDTHIASTAIAGTEHRSTLRVRSV 566
Query: 712 P--FSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSS 769
P ++ D+ + I + + D A S+ P+ R +L + ACR +
Sbjct: 567 PSVLGQQPLLQASDLLECIDLMLET------------DHAVSMVPAAQR-VLETLACRHA 613
Query: 770 IMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHL 807
IM GD L Q++L+ L+ P+ C HGRP++ L
Sbjct: 614 IMFGDRLDLAACQQLLKRLSKCRLPFQCAHGRPSVAAL 651
>gi|15789473|ref|NP_279297.1| DNA mismatch repair protein [Halobacterium sp. NRC-1]
gi|169235188|ref|YP_001688388.1| DNA mismatch repair protein [Halobacterium salinarum R1]
gi|20455147|sp|Q9HSM6.1|MUTL_HALSA RecName: Full=DNA mismatch repair protein MutL
gi|229486323|sp|B0R2S6.1|MUTL_HALS3 RecName: Full=DNA mismatch repair protein MutL
gi|10579807|gb|AAG18777.1| DNA mismatch repair protein [Halobacterium sp. NRC-1]
gi|167726254|emb|CAP13036.1| DNA mismatch repair protein MutL [Halobacterium salinarum R1]
Length = 659
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 89/188 (47%), Gaps = 18/188 (9%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEE 676
++V+GQ + +++ + L +VDQHAADE+ ++ERL Q L+ P +L+LT E
Sbjct: 461 LRVLGQLHDTYVVAEAGDGLVLVDQHAADERVHYERLQARVDGASQALVAPAELELTAGE 520
Query: 677 EVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQG 736
V + +R+ GF E LAG R+ AVP E +D
Sbjct: 521 AAVFEAALGGLRELGFDAE-----LAGRTARVTAVPAVLADALDAELARD---------- 565
Query: 737 ECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWN 796
++SS+ D + A+LA AC +I +L + +L+ L +P+
Sbjct: 566 ---VLSSFLADADGTPVADAADAVLADLACSPAIKGNTSLAEGSVVALLDALDACENPYA 622
Query: 797 CPHGRPTM 804
CPHGRPT+
Sbjct: 623 CPHGRPTI 630
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 47/68 (69%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR ++ V RI AG+V++ +S VKELVENSLDAGA S+++++ G + V D+G G
Sbjct: 5 IRALDDATVARIAAGEVVERPASVVKELVENSLDAGAASVDVSVDAGGTDRIVVADDGRG 64
Query: 72 ISPNNFKV 79
++ ++ ++
Sbjct: 65 MTGDDLRM 72
Score = 47.4 bits (111), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 63/136 (46%), Gaps = 11/136 (8%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPV-AICKSDSC-KVEGFLSKPGQGSGRNLGDRQ 168
V T G+ ++D + V+G + L V A +DS +V G++S P R+
Sbjct: 198 VFATTGTGDVQDAALAVYGREVAQSLRTVDADPAADSVERVHGYVSDPEV----TRSTRE 253
Query: 169 YF--FVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACDVNVTPDKRKVFF 225
Y FVN R V + + V + Y + +YP A++ V D NV P K +V F
Sbjct: 254 YLATFVNGRAVTDAVLREAVLDGYGDQLAPDRYPFAVL--FVDCEGVDANVHPRKLEVRF 311
Query: 226 SDECSILHALREGLQE 241
DE + A+ G+++
Sbjct: 312 EDEAGVKAAVEAGVRD 327
>gi|89894335|ref|YP_517822.1| hypothetical protein DSY1589 [Desulfitobacterium hafniense Y51]
gi|89333783|dbj|BAE83378.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 733
Score = 82.8 bits (203), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 95/195 (48%), Gaps = 22/195 (11%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERL---SQSTVLNQQPLLRPLKLDLT 673
++ IGQ +I+ + L I DQHAA E+ N+ERL Q+ N Q LL PL ++ T
Sbjct: 545 LRPIGQVFNTYIMATDGEQLVIFDQHAAHERINYERLLAEHQNNPGNSQMLLIPLTMEFT 604
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLR-FRLKAVPFSKKITFGVEDVKDLISTLA 732
P EE H ++ + GF LE G R + L+ +P G + ++D +
Sbjct: 605 PGEEEALLEHFLLLNEMGFILEH-----FGTRTYLLRGIPAYSGPYQGEQLLRDFLD--- 656
Query: 733 DNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLN 792
++ ++ T D + + + AC++SI + L EM++++ L+
Sbjct: 657 ------QVMLNHIPPTMDKLLEEWIYML----ACKASIKAKENLTLFEMEQLIVQLSKTL 706
Query: 793 SPWNCPHGRPTMRHL 807
+P+ CPHGRPTM L
Sbjct: 707 NPYTCPHGRPTMIQL 721
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 80/167 (47%), Gaps = 4/167 (2%)
Query: 103 TGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGR 162
T K+ K +VL+T G +L ++I V G L P++ C ++EG++S P
Sbjct: 189 TLKHPKVLVLQTPGKGNLLESIGAVLGQATARRLLPLS-CSQGDWRLEGYISPPDLVRST 247
Query: 163 NLGDRQYFFVNDRPVDLPKVSKLVNELYKG-ANSRQYPIAIMNFIVPTRACDVNVTPDKR 221
G+ VN+R + +S+ ++E Y ++ YPI I+ +P DVNV P K
Sbjct: 248 KQGET--LIVNERIIRSNSISRAISEGYHTLIPAKLYPITILKLHIPPHEYDVNVHPTKM 305
Query: 222 KVFFSDECSILHALREGLQEIYSPNNASYSVNKVEQLIEPEKSGPSS 268
++ F E ++ + EG++ KV+ P++S PS+
Sbjct: 306 EIRFHKEKELMEFIAEGVRRTLLQARPIAPFVKVKNTPSPKESLPSA 352
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 20/125 (16%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I ++ ++I AG+V++ S VKEL+EN+LDA AT IE+ ++ G E +V DNG G
Sbjct: 5 IHILDSQAANQIAAGEVVERPVSVVKELIENALDAQATQIEVIIEGSGVERIRVQDNGQG 64
Query: 72 ISPNNF----------KVRAV----------FLCQAYALIAKGVRFVCTNTTGKNVKSVV 111
IS + K+R++ F +A IA R + + + V
Sbjct: 65 ISAADLPLTVLRHATSKIRSIDDLNRLRTLGFRGEALPSIASVSRLEIISRPPEEISGRV 124
Query: 112 LKTQG 116
L+ QG
Sbjct: 125 LRIQG 129
>gi|448610428|ref|ZP_21661174.1| DNA mismatch repair protein MutL [Haloferax mucosum ATCC BAA-1512]
gi|445745052|gb|ELZ96522.1| DNA mismatch repair protein MutL [Haloferax mucosum ATCC BAA-1512]
Length = 566
Score = 82.8 bits (203), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 95/204 (46%), Gaps = 24/204 (11%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLS---QSTVLNQQPLLRPLKL 670
F +VIG+F +++ + D DL +VDQHAA E+ N+ERL ++ + + P +
Sbjct: 374 FDDCRVIGRFRELYLLCEADDDLLVVDQHAAHERINYERLRDAVETAGIESVAVDPPATV 433
Query: 671 DLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIST 730
L+ + + + D + GF A +R++AVP F + D ++
Sbjct: 434 SLSATDAALLESNRDAVEALGFRAA----AFGDGAYRVEAVPAPLGRPFNPAALADAVTD 489
Query: 731 LADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLAD 790
+A G+ S D D +L AC SSI GD L E +++E L
Sbjct: 490 VA--AGDAS-------DPRDE--------LLKDLACHSSIKAGDDLTDEEASQVVERLGA 532
Query: 791 LNSPWNCPHGRPTMRHLVDLTTIR 814
+P+ CPHGRPT+ + + T +R
Sbjct: 533 CETPYTCPHGRPTILSIDEKTFVR 556
Score = 48.1 bits (113), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR ++ I AG+V+ +S V ELVEN+LDAGA ++ I + G + +V D+G G
Sbjct: 2 IRRLDPKTRSNIAAGEVVTRPASVVVELVENALDAGAETVTIDVDGDGTDRIRVADDGRG 61
Query: 72 ISPNN 76
+S ++
Sbjct: 62 MSKSD 66
>gi|423073918|ref|ZP_17062653.1| MutL dimerization domain protein [Desulfitobacterium hafniense DP7]
gi|361855331|gb|EHL07315.1| MutL dimerization domain protein [Desulfitobacterium hafniense DP7]
Length = 343
Score = 82.8 bits (203), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 95/196 (48%), Gaps = 22/196 (11%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERL---SQSTVLNQQPLLRPLKLDLT 673
++ IGQ +I+ + L I DQHAA E+ N+ERL Q+ N Q LL PL ++ T
Sbjct: 155 LRPIGQVFNTYIMATDGEQLVIFDQHAAHERINYERLLAEHQNNPGNSQMLLIPLTMEFT 214
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLR-FRLKAVPFSKKITFGVEDVKDLISTLA 732
P EE H ++ + GF LE G R + L+ +P G + ++D +
Sbjct: 215 PGEEEALLEHFLLLNEMGFILEH-----FGTRTYLLRGIPAYSGPYQGEQLLRDFLD--- 266
Query: 733 DNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLN 792
++ ++ T D + + + AC++SI + L EM++++ L+
Sbjct: 267 ------QVMLNHIPPTMDKLLEEWIYML----ACKASIKAKENLTLFEMEQLIVQLSKTL 316
Query: 793 SPWNCPHGRPTMRHLV 808
+P+ CPHGRPTM L
Sbjct: 317 NPYTCPHGRPTMIQLT 332
>gi|423082693|ref|ZP_17071282.1| DNA mismatch repair protein [Clostridium difficile 002-P50-2011]
gi|423087013|ref|ZP_17075403.1| DNA mismatch repair protein [Clostridium difficile 050-P50-2011]
gi|357545262|gb|EHJ27237.1| DNA mismatch repair protein [Clostridium difficile 050-P50-2011]
gi|357547811|gb|EHJ29686.1| DNA mismatch repair protein [Clostridium difficile 002-P50-2011]
Length = 655
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 93/198 (46%), Gaps = 23/198 (11%)
Query: 610 RKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTV---LNQQPLLR 666
RK VIG +II D ++++DQHAA E+ +ER + +N Q LL
Sbjct: 462 RKFSLYGYSVIGVVFNTYIILSKDDSMYLLDQHAAHERILYERYMEKFYRQDINMQILLD 521
Query: 667 PLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKD 726
P+ ++++ + + ++++ K GF LE ++ VP FGV + +
Sbjct: 522 PVVIEVSNVDMLQIENNLELFMKFGFELE----IFGNNHIMVRCVP----TIFGVPETEK 573
Query: 727 LISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILE 786
I + DN E I S+Y + AS ACRS+I D + E++ +LE
Sbjct: 574 FILQIIDNIEE--ITSNYDLKGE----------RFASMACRSAIKANDKIYDIEIKSLLE 621
Query: 787 HLADLNSPWNCPHGRPTM 804
L N+P+ CPHGRP M
Sbjct: 622 QLEKCNNPFTCPHGRPIM 639
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 20 VHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFKV 79
+++I AG+V++ SS VKEL+ENS+DAGA I I + + G+ ++ DNG GI + +V
Sbjct: 13 INKIAAGEVVERPSSVVKELIENSIDAGANKISIDIIDGGKSLIKITDNGIGIPSS--EV 70
Query: 80 RAVFLCQAYALIAK 93
FL A + I K
Sbjct: 71 EKSFLRHATSKIKK 84
>gi|284166477|ref|YP_003404756.1| DNA mismatch repair protein MutL [Haloterrigena turkmenica DSM
5511]
gi|284016132|gb|ADB62083.1| DNA mismatch repair protein MutL [Haloterrigena turkmenica DSM
5511]
Length = 738
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 94/191 (49%), Gaps = 18/191 (9%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLN--QQPLLRPLKLDLTP 674
++V+GQ + +++ + D L ++DQHAADE+ N+ERL Q+ + Q L P++L+LT
Sbjct: 542 LRVLGQLDDTYLVCETDDGLVLIDQHAADERVNYERLQQAFADDPAAQALAEPVELELTA 601
Query: 675 EEEVVASMHMDIIRKNGFSLEE-DPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
E + + + + GF + D +A + VP + T E ++D++++ +
Sbjct: 602 AEAEAFEGYREALSRLGFYADRTDDRTVA-----VTTVPAVLEETIAPERLRDVLASFVE 656
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNS 793
E +T D++ L AC SI +L + +LE L D +
Sbjct: 657 GDREAG------AETVDALADE----FLGDLACYPSITGNTSLTEGSVVDLLEALDDCEN 706
Query: 794 PWNCPHGRPTM 804
P+ CPHGRP +
Sbjct: 707 PYACPHGRPVI 717
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 47/74 (63%)
Query: 6 PTNSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQV 65
P IR +++ V RI AG+V++ +SAVKELVENSLDA A S+++ ++ G E +V
Sbjct: 5 PPQETEIRQLDEDTVARIAAGEVVERPASAVKELVENSLDANADSVDVTVEAGGTELIRV 64
Query: 66 VDNGCGISPNNFKV 79
D+G G+ + +
Sbjct: 65 ADDGRGMGEADVRA 78
Score = 46.6 bits (109), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 55/130 (42%), Gaps = 14/130 (10%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSC-----KVEGFLSKPGQGSGRNLG 165
V T G L+ ++ V+G + + + V D V G +S P N
Sbjct: 208 VFATTGQGDLQAAVMAVYGREVASAMIAVEADGDDLPPGPLESVSGLVSHPET----NRS 263
Query: 166 DRQYF--FVNDRPVDLPKVSKLVNELYKGA--NSRQYPIAIMNFIVPTRACDVNVTPDKR 221
+Y +VN R V V + + Y GA +YP + VP A DVNV P KR
Sbjct: 264 SPEYLATYVNGRSVTADAVREGIMGAY-GAQLGGDRYPFVTLFLEVPGEAVDVNVHPRKR 322
Query: 222 KVFFSDECSI 231
+V F D+ S+
Sbjct: 323 EVRFDDDDSV 332
>gi|219668759|ref|YP_002459194.1| DNA mismatch repair protein MutL [Desulfitobacterium hafniense
DCB-2]
gi|219539019|gb|ACL20758.1| DNA mismatch repair protein MutL [Desulfitobacterium hafniense
DCB-2]
Length = 730
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 95/195 (48%), Gaps = 22/195 (11%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERL---SQSTVLNQQPLLRPLKLDLT 673
++ IGQ +I+ + L I DQHAA E+ N+ERL Q+ N Q LL PL ++ T
Sbjct: 542 LRPIGQVFNTYIMATDGEQLVIFDQHAAHERINYERLLAEHQNNPGNSQMLLIPLTMEFT 601
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLR-FRLKAVPFSKKITFGVEDVKDLISTLA 732
P EE H ++ + GF LE G R + L+ +P G + ++D +
Sbjct: 602 PGEEEALLEHFLLLNEMGFILEH-----FGTRTYLLRGIPAYSGPYQGEQLLRDFLD--- 653
Query: 733 DNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLN 792
++ ++ T D + + + AC++SI + L EM++++ L+
Sbjct: 654 ------QVMLNHIPPTMDKLLEEWIYML----ACKASIKAKENLTLFEMEQLIVQLSKTL 703
Query: 793 SPWNCPHGRPTMRHL 807
+P+ CPHGRPTM L
Sbjct: 704 NPYTCPHGRPTMIQL 718
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 79/167 (47%), Gaps = 4/167 (2%)
Query: 103 TGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGR 162
T K+ K +VL+T G +L ++I V G L P++ C ++EG++S P
Sbjct: 189 TLKHPKVLVLQTPGKGNLLESIGAVLGQATARRLLPLS-CSLGDWRLEGYISPPDLVRST 247
Query: 163 NLGDRQYFFVNDRPVDLPKVSKLVNELYKG-ANSRQYPIAIMNFIVPTRACDVNVTPDKR 221
G+ VN+R + +S+ ++E Y ++ YPI I+ +P DVNV P K
Sbjct: 248 KQGET--LIVNERIIRSNSISRAISEGYHTLIPAKLYPITILKLHIPPHEYDVNVHPTKM 305
Query: 222 KVFFSDECSILHALREGLQEIYSPNNASYSVNKVEQLIEPEKSGPSS 268
++ F E ++ + EG++ KV+ P++S P +
Sbjct: 306 EIRFHKEKELMEFIAEGVRRTLLQARPIAPFVKVKNTPSPKESLPGA 352
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 58/120 (48%), Gaps = 20/120 (16%)
Query: 22 RICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNF---- 77
+I AG+V++ S VKEL+EN+LDA AT IE+ ++ G E +V DNG GIS +
Sbjct: 15 QIAAGEVVERPVSVVKELIENALDAQATQIEVIIEGSGVERIRVQDNGQGISAEDLPLTV 74
Query: 78 ------KVRAV----------FLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLK 121
K+R + F +A IA R + + + VL+ QG L+
Sbjct: 75 LRHATSKIRTIDDLNRLRTLGFRGEALPSIASVSRLEIISRPPEEISGRVLRIQGGEQLE 134
>gi|421076047|ref|ZP_15537049.1| DNA mismatch repair protein mutL [Pelosinus fermentans JBW45]
gi|392525906|gb|EIW49030.1| DNA mismatch repair protein mutL [Pelosinus fermentans JBW45]
Length = 606
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 97/203 (47%), Gaps = 24/203 (11%)
Query: 605 LERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTV-LNQQP 663
+ R+ F + +GQ + FII K L+I+DQHAA E+ ++++SQ T + Q
Sbjct: 410 ISRIIEDSQF-TLYPLGQVDDCFIISKGPDGLYIIDQHAAHERILYDKMSQHTERIPSQQ 468
Query: 664 LLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLR-FRLKAVPFSKKITFGVE 722
LL PL LD E + S + D K GF+LE LAG RL +P
Sbjct: 469 LLVPLFLDFDTTEINIISEYHDTFYKLGFTLE-----LAGPNTMRLSELP---------S 514
Query: 723 DVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAM-LASRACRSSIMIGDALGRNEM 781
D+ L++ + I Y + + P +R L +CR++I G+ L +M
Sbjct: 515 DIP-----LSETEASIRQILEYIQNMHEP-NPQELRHHCLQIASCRAAIKAGETLNMRQM 568
Query: 782 QKILEHLADLNSPWNCPHGRPTM 804
Q ++ L + + P+ CPHGRP M
Sbjct: 569 QALIGELCNTHLPYTCPHGRPAM 591
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 89/171 (52%), Gaps = 10/171 (5%)
Query: 106 NVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKS-DSCKVEGFLSKPGQ-GSGRN 163
N +VL T G++ L+D + ++G I L PV + D+ K+ G+LSKP S R
Sbjct: 192 NNNRLVLSTPGNNQLQDTLTNIYGQKIAPDLLPVHYENTIDNIKISGYLSKPTLLKSSRQ 251
Query: 164 LGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQ-YPIAIMNFIVPTRACDVNVTPDKRK 222
Q VN R ++ ++K ++ Y + YP+A++N VPT DVNV P K +
Sbjct: 252 W---QTVIVNARVINSRSIAKALDNAYHSLLPKSGYPLAVLNVSVPTDTIDVNVHPQKSE 308
Query: 223 VFFSDECSILHALREGLQEIYSPNNASYSVNKVEQLIEPEKSGPSSGAESC 273
V FSDE I A+ + + E+ S A ++ +++ +E K PSS + S
Sbjct: 309 VKFSDEQKIFRAVYKAVIEVLS---APHAPDQLAATVE-FKPNPSSYSHSA 355
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 43/62 (69%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I +++ ++I AG+V++ SS VKELVENS+DA + +IEI + E G + ++ D+G G
Sbjct: 4 IHVLDENTANKIAAGEVVERPSSIVKELVENSIDAQSKNIEIEIAEGGIGFIRITDDGIG 63
Query: 72 IS 73
+S
Sbjct: 64 MS 65
>gi|95931317|ref|ZP_01314032.1| DNA mismatch repair protein MutL [Desulfuromonas acetoxidans DSM
684]
gi|95132618|gb|EAT14302.1| DNA mismatch repair protein MutL [Desulfuromonas acetoxidans DSM
684]
Length = 628
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 93/198 (46%), Gaps = 22/198 (11%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTV---LNQQPLLRPLKL 670
F +++IGQF+ +I+ + DL ++DQHAA E+ FERL + QQ LL P +
Sbjct: 437 FSTLRIIGQFHRSYILCEDGDDLVLIDQHAAHERIGFERLKNQLAQGSIEQQELLFPEVI 496
Query: 671 DLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVP-FSKKITFGVEDVKDLIS 729
+L E+ + GF LE G + +KAVP + +K +D+K ++
Sbjct: 497 ELNLREDAELQDCRERFESMGFVLE----PFGGTSWAVKAVPAYIEK-----KDIKTMV- 546
Query: 730 TLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLA 789
C +++ + + + + +L AC I L +EM +L L
Sbjct: 547 --------CDMLTDFSSVGSSDISQQAIDEVLIKMACHGMIRANQTLQLDEMVALLHQLD 598
Query: 790 DLNSPWNCPHGRPTMRHL 807
D++ +CPHGRP M+ L
Sbjct: 599 DVDFNRHCPHGRPVMQRL 616
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 43/64 (67%), Gaps = 5/64 (7%)
Query: 22 RICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFKVRA 81
+I AG+V++ +S VKELVEN+LDA AT + + ++ G++ +V DNG G+S +
Sbjct: 17 QIAAGEVVERPASVVKELVENALDAQATEVTVDVERGGKKKIRVSDNGFGMSKED----- 71
Query: 82 VFLC 85
+FLC
Sbjct: 72 LFLC 75
>gi|66358254|ref|XP_626305.1| PMS1'MutL family ATpase' [Cryptosporidium parvum Iowa II]
gi|46228008|gb|EAK88928.1| PMS1'MutL family ATpase' [Cryptosporidium parvum Iowa II]
Length = 971
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 97/208 (46%), Gaps = 36/208 (17%)
Query: 584 ELSQPENEERKARALAAATTELERLFRKEDFGRMKVIGQFNLGFIIGKL----DQD---- 635
EL EN++ R F+K F +++VIGQFN GFI+ KL +Q+
Sbjct: 710 ELKDTENDQSSNRCFN---------FKKHLFNQLQVIGQFNKGFILTKLSIKEEQNYINH 760
Query: 636 ---------------LFIVDQHAADEKYNFERL-SQSTVLNQQPLLRPLKLDLTPEEEVV 679
+FI+DQHA+DEK FE+L S + + Q L+ PL + LTP +E +
Sbjct: 761 KNNEKNGENMMESLHIFIIDQHASDEKARFEKLNSDLSNIQTQKLISPLSVSLTPSQEQL 820
Query: 680 ASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECS 739
+ DI +NGF + ++ G R +L +P I D DL+S + + S
Sbjct: 821 VISYKDIFEQNGFRFIFNSNSEIGSRIQLTQLPVILGIPLKQIDFLDLLSQINKYKVRVS 880
Query: 740 IISSYKMDTADSVCPSRVRAMLASRACR 767
II K D P ++ + + S CR
Sbjct: 881 IIDDSKSKILD--LPRQISSNI-SVECR 905
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 43/64 (67%)
Query: 9 SPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDN 68
S ++ ++K RIC+ QVI +L +KELV+N++DAG T I I+L ++G +V+DN
Sbjct: 15 STMLKKLSKEDQDRICSQQVITELQDCIKELVDNAIDAGCTEILISLTDFGSSTIEVLDN 74
Query: 69 GCGI 72
G GI
Sbjct: 75 GKGI 78
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 58/105 (55%), Gaps = 9/105 (8%)
Query: 149 VEGFLSKPGQGSGRNLGDRQYFFVNDRPVD-LPKVSKLVNELYKGA----NSRQYPIAIM 203
+ GF+S +G R D Q F VN+RPVD + ++S++++ ++ N + YP ++
Sbjct: 313 ISGFISSLDKG--RPSPDHQIFTVNNRPVDPIKRISRVISSIHSTLSSFNNRKLYPAFVI 370
Query: 204 NFIVPTRACDVNVTPDKRKVFFSDECSILHA--LREGLQEIYSPN 246
N +P D+NVTP+KR V + + A +++ LQ+ Y N
Sbjct: 371 NIHLPQSLLDINVTPNKRIVMLPAKVETVLAENIQQFLQDSYQNN 415
>gi|189485479|ref|YP_001956420.1| DNA mismatch repair protein MutL [uncultured Termite group 1
bacterium phylotype Rs-D17]
gi|238058939|sp|B1H0C7.1|MUTL_UNCTG RecName: Full=DNA mismatch repair protein MutL
gi|170287438|dbj|BAG13959.1| DNA mismatch repair protein MutL [uncultured Termite group 1
bacterium phylotype Rs-D17]
Length = 595
Score = 82.4 bits (202), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 95/202 (47%), Gaps = 23/202 (11%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFE-RLSQ--STVLNQQPLLRPLKLDLT 673
+KVIGQ +II DL+I DQHAA E+ +E LSQ S + Q +L P DL+
Sbjct: 409 IKVIGQVFDTYIIASNKGDLYIFDQHAAAERVRYEFYLSQMKSQTIKIQQMLMPENFDLS 468
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
P + +++I + G S+EE FR+ A P L+ ++
Sbjct: 469 PSISELLKANINIFNELGISIEE----FGQNSFRITAYP-------------ALLGNISM 511
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNS 793
Q +IIS + D + + R + ACR+SI GD + E +K++ L
Sbjct: 512 EQIVKTIISDIEDDKHAEI--EQKRDKIIRSACRASIKAGDNVSFIEAKKLINDLFKCKQ 569
Query: 794 PWNCPHGRPTMRHLVDLTTIRK 815
P+ CPHGRPT + + L I K
Sbjct: 570 PFTCPHGRPTA-YKISLNEIEK 590
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 45/62 (72%), Gaps = 3/62 (4%)
Query: 14 PIN---KGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
PIN + V++I AG+V++ +AVKELVENSLDA A+SI + ++E G++ +V DNG
Sbjct: 2 PINILSQETVNKIAAGEVVERPLNAVKELVENSLDAFASSITVEIEEAGKKLIRVSDNGF 61
Query: 71 GI 72
G+
Sbjct: 62 GM 63
Score = 47.8 bits (112), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 168 QYFFVNDRPVDLPK-VSKLVNELYKGANSR-QYPIAIMNFIVPTRACDVNVTPDKRKVFF 225
QY FVN RPV+ PK + V + YK + R +YP ++ V DVN+ P KR+V F
Sbjct: 249 QYLFVNSRPVNYPKRLMHCVYQSYKESIPRDKYPGILIYTDVDPSEIDVNIHPAKREVKF 308
Query: 226 SDECSILHALREGLQ 240
+DE I L + L+
Sbjct: 309 ADENGIYDILFKALR 323
>gi|289424087|ref|ZP_06425873.1| DNA mismatch repair protein MutL [Peptostreptococcus anaerobius
653-L]
gi|289155512|gb|EFD04191.1| DNA mismatch repair protein MutL [Peptostreptococcus anaerobius
653-L]
Length = 627
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 89/198 (44%), Gaps = 23/198 (11%)
Query: 610 RKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQ---QPLLR 666
R DF +K IG +II + D+ ++DQHAA E+ FE N Q L+
Sbjct: 434 RNPDFIGLKFIGIIFDTYIIFSKNDDMIMLDQHAAHERIRFEMYMSKYKANDISVQMLID 493
Query: 667 PLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKD 726
P+ +DL + ++D+ GF +EE H +R +P TFG + K
Sbjct: 494 PIIMDLDANDMDTVRKNIDVFSSFGFLVEEFGHRSISIR----GLPN----TFGEPESKR 545
Query: 727 LISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILE 786
I L D G+ I K D +A AC+S+I D + E + ++
Sbjct: 546 FIYELIDGLGKIDNIYDTKYDE------------IAEIACKSAIKGNDKISIEEAKHLIG 593
Query: 787 HLADLNSPWNCPHGRPTM 804
L + ++P+ CPHGRPTM
Sbjct: 594 QLEECSNPYTCPHGRPTM 611
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 52/80 (65%), Gaps = 2/80 (2%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I ++ +++I AG+V++ SS +KELVENS+DAG++ I I ++ G++ ++VDNG G
Sbjct: 4 INILDDSTINKIAAGEVVERPSSIIKELVENSIDAGSSYISIEIENGGKDLIRIVDNGSG 63
Query: 72 ISPNNFKVRAVFLCQAYALI 91
I ++ V FL A + I
Sbjct: 64 IDKDD--VNKAFLRHATSKI 81
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 65/138 (47%), Gaps = 4/138 (2%)
Query: 106 NVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLG 165
N + +T G S+ + I ++G +I L + +S + G+L G
Sbjct: 191 NNSKTIYETLGDGSIINAIRMIYGRDISENLIEID-YRSKYFSISGYLGNNNIYRGNR-- 247
Query: 166 DRQYFFVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACDVNVTPDKRKVF 224
+ Q+ ++N R + P +SK +N+ YK +YPI +N V DVN+ P K +V
Sbjct: 248 NHQHLYINGRYIKSPNISKKINDAYKAIIPINKYPIYFVNISVDPAKVDVNIHPSKLEVK 307
Query: 225 FSDECSILHALREGLQEI 242
F E IL+ L + ++ I
Sbjct: 308 FDQEEEILNELSDFVRGI 325
>gi|150390306|ref|YP_001320355.1| DNA mismatch repair protein [Alkaliphilus metalliredigens QYMF]
gi|167017335|sp|A6TR78.1|MUTL_ALKMQ RecName: Full=DNA mismatch repair protein MutL
gi|149950168|gb|ABR48696.1| DNA mismatch repair protein MutL [Alkaliphilus metalliredigens
QYMF]
Length = 637
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 24/208 (11%)
Query: 604 ELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNF----ERLSQSTVL 659
+L++ F K KV+GQ +I+ + DQ ++++DQHAA EK + E L + TV
Sbjct: 437 QLQKNFIKTYLQNYKVVGQLFNTYIVIEKDQSVYLIDQHAAHEKLLYIQFHEELKKETVA 496
Query: 660 NQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITF 719
+QQ LL P+ L+ + E+ + ++ GF LE A ++AVP
Sbjct: 497 SQQ-LLTPVVLEFSHEDYITLIENISEFIPLGFELE----AFGQNSIIIRAVPL------ 545
Query: 720 GVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRN 779
L+ D +I K + V P +R + R+C+ +I D L
Sbjct: 546 -------LLDKPKDYNFIFELIDQVKNE--KHVKPDYIREKIIQRSCKEAIKAMDILDIQ 596
Query: 780 EMQKILEHLADLNSPWNCPHGRPTMRHL 807
E+Q+++ L L P CPHGRP + L
Sbjct: 597 EIQQLIRDLEKLEPPLTCPHGRPILLTL 624
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 49/67 (73%)
Query: 10 PTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNG 69
P I+ ++ +++I AG+V++ S VKEL+EN++DAG T+I + +KE G+++ +V DNG
Sbjct: 2 PQIKLLDNLTINKIAAGEVVEGPYSIVKELIENAIDAGGTAITLEIKEGGKKYIRVTDNG 61
Query: 70 CGISPNN 76
GIS ++
Sbjct: 62 IGISSDD 68
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 71/140 (50%), Gaps = 4/140 (2%)
Query: 106 NVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLG 165
N ++ + T G +L I++VF N + L P+++ K + +++GF+S+ G
Sbjct: 191 NNQTTIFTTPGDGTLSSVILSVFEKNFFQNLIPLSVNKP-ALELDGFISQVDFVRGNR-- 247
Query: 166 DRQYFFVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACDVNVTPDKRKVF 224
Q F+VN R + +S+ + E YKG +YPI ++N + D+NV P K ++
Sbjct: 248 SFQIFYVNGRYIKSKLISQAIEEAYKGKIPINKYPICVLNIKIDPEDADINVHPSKTEIK 307
Query: 225 FSDECSILHALREGLQEIYS 244
F E I H + + ++ S
Sbjct: 308 FHKEKEIYHYIYNYVTQVLS 327
>gi|317472766|ref|ZP_07932078.1| DNA mismatch repair protein MutL [Anaerostipes sp. 3_2_56FAA]
gi|316899758|gb|EFV21760.1| DNA mismatch repair protein MutL [Anaerostipes sp. 3_2_56FAA]
Length = 620
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 97/192 (50%), Gaps = 25/192 (13%)
Query: 618 KVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQS---TVLNQQPLLRPLKLDLTP 674
KVIGQ + + + + LFI+DQHAA EK N+E+L +S + Q + P + L+
Sbjct: 433 KVIGQLFKTYWLIEYEDQLFIMDQHAAHEKVNYEKLMKSFREKKIYSQGVEPPYVVTLSM 492
Query: 675 EEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADN 734
E V DI ++ GF++E A G F ++ VP + +G+++ K+L L D+
Sbjct: 493 AEAKVLEETKDIFQELGFTIE----AFGGNEFCIRQVPAN---LYGLKE-KELFMELLDS 544
Query: 735 QGECSIISSYKMDTADSVC--PSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLN 792
TAD V P + +AS AC+ S + E++ +L+ L +
Sbjct: 545 L------------TADGVKKDPEMITDKIASMACKMSAKGNQRMSLPEVRNLLDLLMECE 592
Query: 793 SPWNCPHGRPTM 804
+P+ CPHGRPTM
Sbjct: 593 NPYTCPHGRPTM 604
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 69/136 (50%), Gaps = 8/136 (5%)
Query: 112 LKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQY-- 169
+ T G+ ++KD I ++G ++ L P+++ K + V+G++ KP G +R Y
Sbjct: 197 MYTSGNGNVKDIIYHLYGRDVAGALLPISL-KGPTVSVDGYVGKPFISRG----NRNYES 251
Query: 170 FFVNDRPVDLPKVSKLVNELYKGAN-SRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDE 228
+F+N R + + K + + YK + +YP +N V DVNV P K ++ F +E
Sbjct: 252 YFINGRYIKSKIIYKAIEDGYKTFTMAHKYPFVCLNIEVEPELLDVNVHPTKMEIRFRNE 311
Query: 229 CSILHALREGLQEIYS 244
+ L G++E S
Sbjct: 312 KELYELLASGIKETLS 327
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 55/93 (59%), Gaps = 2/93 (2%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ +++ + I AG+VI+ +S VKELVEN++DA AT++ + +++ G +V DNGCG
Sbjct: 4 IQLLDQKTIDNIAAGEVIERPASVVKELVENAIDAKATAVTVEIRDGGMTLMRVTDNGCG 63
Query: 72 ISPNNFKVRAVFLCQAYALIAKGVRFVCTNTTG 104
I +VR FL A + I V ++ G
Sbjct: 64 IPKE--EVRTAFLRHATSKIRTVEDLVSVSSLG 94
>gi|167745631|ref|ZP_02417758.1| hypothetical protein ANACAC_00323 [Anaerostipes caccae DSM 14662]
gi|167654943|gb|EDR99072.1| DNA mismatch repair domain protein [Anaerostipes caccae DSM 14662]
Length = 620
Score = 82.4 bits (202), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 97/192 (50%), Gaps = 25/192 (13%)
Query: 618 KVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQS---TVLNQQPLLRPLKLDLTP 674
KVIGQ + + + + LFI+DQHAA EK N+E+L +S + Q + P + L+
Sbjct: 433 KVIGQLFKTYWLIEYEDQLFIMDQHAAHEKVNYEKLMKSFREKKIYSQGVEPPYVVTLSM 492
Query: 675 EEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADN 734
E V DI ++ GF++E A G F ++ VP + +G+++ K+L L D+
Sbjct: 493 AEAKVLEETKDIFQELGFTIE----AFGGNEFCIRQVPAN---LYGLKE-KELFMELLDS 544
Query: 735 QGECSIISSYKMDTADSVC--PSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLN 792
TAD V P + +AS AC+ S + E++ +L+ L +
Sbjct: 545 L------------TADGVKKDPEMITDKIASMACKMSAKGNQRMSLPEVRNLLDLLMECE 592
Query: 793 SPWNCPHGRPTM 804
+P+ CPHGRPTM
Sbjct: 593 NPYTCPHGRPTM 604
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 69/136 (50%), Gaps = 8/136 (5%)
Query: 112 LKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQY-- 169
+ T G+ ++KD I ++G ++ L P+++ K + V+G++ KP G +R Y
Sbjct: 197 MYTSGNGNVKDIIYHLYGRDVAGALLPISL-KGPTVSVDGYVGKPFISRG----NRNYES 251
Query: 170 FFVNDRPVDLPKVSKLVNELYKGAN-SRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDE 228
+F+N R + + K + + YK + +YP +N V DVNV P K ++ F +E
Sbjct: 252 YFINGRYIKSKIIYKAIEDGYKTFTMAHKYPFVCLNIEVEPELLDVNVHPTKMEIRFRNE 311
Query: 229 CSILHALREGLQEIYS 244
+ L G++E S
Sbjct: 312 KELYELLASGIKETLS 327
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 55/93 (59%), Gaps = 2/93 (2%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ +++ + I AG+VI+ +S VKELVEN++DA AT++ + +++ G +V DNGCG
Sbjct: 4 IQLLDQKTIDNIAAGEVIERPASVVKELVENAIDAKATAVTVEIRDGGMTLMRVTDNGCG 63
Query: 72 ISPNNFKVRAVFLCQAYALIAKGVRFVCTNTTG 104
I +VR FL A + I V ++ G
Sbjct: 64 IPKE--EVRTAFLRHATSKIRTVEDLVSVSSLG 94
>gi|429729020|ref|ZP_19263708.1| DNA mismatch repair protein [Peptostreptococcus anaerobius VPI
4330]
gi|429146169|gb|EKX89229.1| DNA mismatch repair protein [Peptostreptococcus anaerobius VPI
4330]
Length = 627
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 89/198 (44%), Gaps = 23/198 (11%)
Query: 610 RKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQ---QPLLR 666
R DF +K IG +II + D+ ++DQHAA E+ FE N Q L+
Sbjct: 434 RNPDFIGLKFIGIIFDTYIIFSKNDDMIMLDQHAAHERIRFEMYMSKYKANDISVQMLID 493
Query: 667 PLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKD 726
P+ +DL + ++D+ GF +EE H +R +P TFG + K
Sbjct: 494 PIIMDLDANDMDTVRKNIDVFSSFGFLVEEFGHRSISIR----GLPN----TFGEPESKR 545
Query: 727 LISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILE 786
I L D G+ I K D +A AC+S+I D + E + ++
Sbjct: 546 FIYELIDGLGKIDNIYDTKYDE------------IAEIACKSAIKGNDKISIEEAKHLIG 593
Query: 787 HLADLNSPWNCPHGRPTM 804
L + ++P+ CPHGRPTM
Sbjct: 594 QLEECSNPYTCPHGRPTM 611
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 51/80 (63%), Gaps = 2/80 (2%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I ++ +++I AG+V++ SS +KELVENS+DAG++ I I ++ G+ +++DNG G
Sbjct: 4 INILDDSTINKIAAGEVVERPSSIIKELVENSIDAGSSYISIEIENGGKGLIRIIDNGSG 63
Query: 72 ISPNNFKVRAVFLCQAYALI 91
I ++ V FL A + I
Sbjct: 64 IDKDD--VNKAFLRHATSKI 81
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 65/138 (47%), Gaps = 4/138 (2%)
Query: 106 NVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLG 165
N + +T G S+ + I ++G +I L + +S + G+L G
Sbjct: 191 NNSKTIYETLGDGSIINAIRMIYGRDISENLIEID-YRSKYFSISGYLGNNNIYRGNR-- 247
Query: 166 DRQYFFVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACDVNVTPDKRKVF 224
+ Q+ ++N R + P +SK +N+ YK +YPI +N V DVN+ P K +V
Sbjct: 248 NHQHLYINGRYIKSPNISKKINDAYKAIIPINKYPIYFVNISVDPAKVDVNIHPSKLEVK 307
Query: 225 FSDECSILHALREGLQEI 242
F E IL+ L + ++ I
Sbjct: 308 FDQEEEILNELSDFVRGI 325
>gi|349859114|gb|AEQ20594.1| DNA mismatch repair enzyme [uncultured bacterium CSLF42]
Length = 594
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/245 (27%), Positives = 115/245 (46%), Gaps = 23/245 (9%)
Query: 562 MQSSCHTSGSVKMRRCFAAATLELSQPENEERKARALAAATTELERLFRKEDFGRMKVIG 621
M + + + +RR + A L + P A +A ++T LF + ++++G
Sbjct: 354 MDALARYAPPMPVRREASQAALAVQLPFTGTNLADRVADSSTPAHGLFTTDG---LRLLG 410
Query: 622 QFNLGFIIGKLDQDLFIVDQHAADEKYNFERL-SQSTVLN--QQPLLRPLKLDLTPEEEV 678
F +I + +DL ++DQHAA E+ FERL +QS+ +Q LL PL +++
Sbjct: 411 VFRKLYIAAEQGEDLLLIDQHAAAERVLFERLLAQSSTQGAPRQALLTPLLWEISVARAE 470
Query: 679 VASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGEC 738
V ++ +++ GFSLE + L+ +P SK+ +E++ D + +
Sbjct: 471 VVKAYLPNLQELGFSLEPFGPSTFALKEWPAVLPQSKQAERFLEELLDAFEE--ERPTDK 528
Query: 739 SIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCP 798
++I + A ACRS+IM GD + E+ ++L LA P CP
Sbjct: 529 TVIQ---------------HQIAARAACRSAIMAGDPIAPAEIDRLLADLAACERPMTCP 573
Query: 799 HGRPT 803
HGRPT
Sbjct: 574 HGRPT 578
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 83/170 (48%), Gaps = 13/170 (7%)
Query: 78 KVRAVFLCQAYALIAKGVRF-VCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCL 136
+ R + Q L VRF VC + GKN+ + + +L + + V+G++ L
Sbjct: 168 RTRLLKTIQEITLARPDVRFEVCMD--GKNLYTF----STAKNLGERVADVWGLSATENL 221
Query: 137 EPVAICKSDSCKVEGFLSK-PGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYK-GAN 194
P+ + + C + GF++ P + L Q +VN RPV ++ V E YK
Sbjct: 222 VPIDVAQG-PCTIRGFVNAIPAHHPTKAL---QLLYVNQRPVQQRLLTHAVYEAYKEWLP 277
Query: 195 SRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYS 244
++PI ++ + + DVNV P KR+V FSDE +I L ++E++S
Sbjct: 278 VGRHPIFLLFITLDPKLVDVNVHPTKREVRFSDERAIYDLLFRKIRELFS 327
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 41/64 (64%)
Query: 10 PTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNG 69
P ++ + + ++ I AG+V++ +S +KELVENSLDAGA I I L G +V D+G
Sbjct: 2 PKVQKLPESLIRLIAAGEVVERPASVLKELVENSLDAGARKIAIDLWGAGRSRIRVTDDG 61
Query: 70 CGIS 73
G++
Sbjct: 62 EGMT 65
>gi|1304125|dbj|BAA07514.1| PMS4 [Homo sapiens]
gi|1526554|dbj|BAA07471.1| hPMS4 [Homo sapiens]
Length = 252
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 53/67 (79%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+PI++ VH+IC+G V+ LS+AVK++VENSLDAGAT+I++ LK+YG + +V NGCG
Sbjct: 27 IKPIDRKSVHQICSGPVVLSLSTAVKKIVENSLDAGATNIDLKLKDYGVDLIEVSGNGCG 86
Query: 72 ISPNNFK 78
+ NF+
Sbjct: 87 VEEENFE 93
>gi|336434948|ref|ZP_08614667.1| hypothetical protein HMPREF0988_00252 [Lachnospiraceae bacterium
1_4_56FAA]
gi|336002356|gb|EGN32467.1| hypothetical protein HMPREF0988_00252 [Lachnospiraceae bacterium
1_4_56FAA]
Length = 706
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 106/205 (51%), Gaps = 26/205 (12%)
Query: 606 ERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERL---SQSTVLNQQ 662
E L ++E ++IGQ + + + +L+I+DQHAA E+ +ER ++ Q
Sbjct: 506 ENLLKREIRAEYRLIGQVFDTYWLVQFHDNLYIIDQHAAHERVLYERTLKEMKTREFTSQ 565
Query: 663 PLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGV- 721
L P+ L+L+ +E V + H D + GF +EE G + ++AVP + FG+
Sbjct: 566 YLSPPIILNLSMQEAEVLNTHKDRFAQLGFEIEE----FGGEAYAVRAVPAN---LFGIA 618
Query: 722 --EDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRN 779
E + +++ L+D ++T S+ P + +AS +C++++ + L
Sbjct: 619 KKELLLEMLDALSDG-----------LNT--SMTPDLIDEKVASMSCKAAVKGNNRLSAR 665
Query: 780 EMQKILEHLADLNSPWNCPHGRPTM 804
E+ ++ L L++P++CPHGRPT+
Sbjct: 666 EVDTLIGELLLLDNPYHCPHGRPTI 690
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 64/132 (48%), Gaps = 8/132 (6%)
Query: 112 LKTQGSSSLKDNIITVFGMNIY-NCLEPVAICKSDSCKVEGFLSKPGQGSG-RNLGDRQY 169
L+T GS LK+ I +++G N LE + + + GF+ KP G RN +
Sbjct: 197 LRTSGSGKLKEVIYSIYGRETAANILE--LDYEKNGIGIRGFIGKPIITRGNRNF---EN 251
Query: 170 FFVNDRPVDLPKVSKLVNELYKG-ANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDE 228
FVN R V +SK + YK ++P +++F+V DVNV P K ++ F +
Sbjct: 252 IFVNGRYVKSAVISKAAEDAYKDFMMQHKFPFFVLHFLVDGETVDVNVHPTKMELRFQKQ 311
Query: 229 CSILHALREGLQ 240
++ A+ E +
Sbjct: 312 QAVYDAVFEAIH 323
Score = 52.8 bits (125), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 42/61 (68%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ +++ + +I AG+VI+ +S VKEL EN++DAGA S+ + +++ G ++ DNG G
Sbjct: 4 IKVLDQITIDKIAAGEVIERPASIVKELTENAIDAGADSVTVEIEDGGITLIRISDNGSG 63
Query: 72 I 72
I
Sbjct: 64 I 64
>gi|222479064|ref|YP_002565301.1| DNA mismatch repair protein MutL [Halorubrum lacusprofundi ATCC
49239]
gi|222451966|gb|ACM56231.1| DNA mismatch repair protein MutL [Halorubrum lacusprofundi ATCC
49239]
Length = 767
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 101/224 (45%), Gaps = 19/224 (8%)
Query: 586 SQPENEERKARALAAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAAD 645
+QP + R L T ER + + ++V+GQ + ++I + L ++DQHAAD
Sbjct: 539 AQPRSTATAQRTLDGEPTSAERTY--DSLPPLRVLGQLHETYVIAEAPDGLVLIDQHAAD 596
Query: 646 EKYNFERLSQSTV--LNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAG 703
E+ N+ERL + + Q L P++++LT E + +D + GF E
Sbjct: 597 ERVNYERLQTAFADGADAQALAEPVRIELTAREAALFEEFVDDLAGVGFRAERADE---- 652
Query: 704 LRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLAS 763
+++VP E ++D++S L G+ + D D +LA
Sbjct: 653 REVVVESVPAVFDAALDPELLRDVLSALV---GDATAGDEPVTDVVDE--------LLAD 701
Query: 764 RACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHL 807
AC S+ +L + +L+ L D +P+ CPHGRP + L
Sbjct: 702 LACYPSVTGNTSLTEGSVVDLLDRLDDCENPYACPHGRPVVIRL 745
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 82/161 (50%), Gaps = 16/161 (9%)
Query: 10 PTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNG 69
P I +++ V RI AG+V++ +S VKEL+ENSLDAGAT + ++++ G E ++ D+G
Sbjct: 4 PNIERLDERTVQRIAAGEVVERPASVVKELIENSLDAGATRVAVSVEAGGTEGIRIRDDG 63
Query: 70 CGISPNNFKVRAVFLCQAYALIAK-----------GVRFVCTNTTGKNVKSVVLKTQGSS 118
GI + + A A + I K G R T G V + ++++
Sbjct: 64 VGIPADQLE--AAVAEHATSKIGKIEDLDHGVGTLGFRGEALYTVGA-VSRLTVRSRPPG 120
Query: 119 SLKDNIITVFGMNIYNCLEPVAICKSDSCKVEG-FLSKPGQ 158
+ + ITV G ++ + + P + + +V+G F + P +
Sbjct: 121 ADAGSEITVEGGDVGD-VRPAGCPEGTTVEVDGLFYNTPAR 160
Score = 43.9 bits (102), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 65/155 (41%), Gaps = 20/155 (12%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCL-----EP 138
+ YAL GV V G+ T+G+ L+ ++ V+G + + + EP
Sbjct: 177 VVTGYALANPGV-AVSLEHDGRET----FATEGNGDLRSAVLAVYGREVADAMVDMEWEP 231
Query: 139 VAICKSDSC--KVEGFLSKPGQGSGRNLGDRQYF--FVNDRPVDLPKVSKLVNELYKGA- 193
+DS V G +S P R+Y +VN R V + V + Y G
Sbjct: 232 -GNSDTDSPVHSVTGLVSHPET----TRSSREYLATYVNGRYVTAGALRDAVLDAYGGQL 286
Query: 194 NSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDE 228
+YP A++ VP DVNV P K +V F +E
Sbjct: 287 APDRYPFAVLFVEVPPGDVDVNVHPRKLEVRFDEE 321
>gi|401410400|ref|XP_003884648.1| hypothetical protein NCLIV_050460 [Neospora caninum Liverpool]
gi|325119066|emb|CBZ54618.1| hypothetical protein NCLIV_050460 [Neospora caninum Liverpool]
Length = 1620
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/57 (59%), Positives = 47/57 (82%)
Query: 754 PSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
P +V +LASRACRS+IM+GD L ++MQK+L +L+ L+ P+NCPHGRPT+RHL D+
Sbjct: 1345 PKKVWEILASRACRSAIMVGDTLSVSQMQKVLSNLSTLHLPFNCPHGRPTVRHLFDV 1401
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 42/66 (63%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
+ ++ V +C+ QV+ L S KEL+EN++DAGAT++E+ + G E +V DNG G
Sbjct: 160 LHAMSASVADGVCSQQVVLGLKSICKELIENAIDAGATTVEVRFVDGGMESIEVRDNGSG 219
Query: 72 ISPNNF 77
I P +F
Sbjct: 220 IGPQDF 225
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 84/178 (47%), Gaps = 25/178 (14%)
Query: 81 AVFLCQAYALI-AKGVRFVCT-------NTTGKNVKS---------VVLKTQGSSS-LKD 122
A+ Q +AL+ A R + T N TG+ S +L T+G+++ L D
Sbjct: 330 ALAFLQKFALLHAADCRVLVTDFIPGDANRTGEGSGSQRRKGGSTVTLLNTRGTAARLID 389
Query: 123 NIITVFGMNIYNCLEPVAICKSDSCK---VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDL 179
++V+G V++ ++ + +E LS+P G Q FFVN+R VD
Sbjct: 390 AAVSVYGARQMQQCSQVSLKGTEPGREWSLEVLLSRPPLGV--RTSSLQLFFVNNRVVDF 447
Query: 180 PKV-SKLVNELYKGANSRQ-YPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHAL 235
P + KL+N+ Y+ SRQ +PI I V +VN+ DK++V + E I AL
Sbjct: 448 PPLLQKLINKKYREVCSRQCFPIVIAFVAVAPHLLEVNLRKDKQEVLLAVEKEITEAL 505
>gi|452208552|ref|YP_007488674.1| DNA mismatch repair protein MutL [Natronomonas moolapensis 8.8.11]
gi|452084652|emb|CCQ37999.1| DNA mismatch repair protein MutL [Natronomonas moolapensis 8.8.11]
Length = 700
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 92/196 (46%), Gaps = 29/196 (14%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQ--STVLNQQPLLRPLKLDLTP 674
++V+GQF+ +++ + L ++DQHAADE+ N+ERL + + + Q L P+ + +T
Sbjct: 502 LRVLGQFDDTYLVAESADGLVLIDQHAADERVNYERLRERFAGDVTTQTLTDPVAVGVTA 561
Query: 675 EEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADN 734
E +A + D + + GF R RL S V + + LAD+
Sbjct: 562 REAALAEEYGDALSRLGF------------RTRLDEGTLS---------VTTVPAFLADH 600
Query: 735 QGECS------IISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHL 788
GE + ++ + + S V +L AC SI +L ++ +LE L
Sbjct: 601 VGEAAPELARDLLGEFVGGDPEGTVESVVDDVLGDLACHPSITGHTSLREGTVEALLEAL 660
Query: 789 ADLNSPWNCPHGRPTM 804
+P+ CPHGRPT+
Sbjct: 661 DGCENPYACPHGRPTV 676
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 45/68 (66%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR ++ RI AG+V++ +S VKELVEN+LDA A IE+A++ G + V D+G G
Sbjct: 5 IRELDAETRDRIAAGEVVERPASVVKELVENALDADAGRIEVAVEAGGTDRIVVSDDGVG 64
Query: 72 ISPNNFKV 79
++ ++ ++
Sbjct: 65 MTESDARL 72
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 60/136 (44%), Gaps = 10/136 (7%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAI---CKSDSCKVEGFLSKPGQGSGRNLGDR 167
T G ++ V+G ++ + PV + VEG +S P N
Sbjct: 197 TFATTGDGDRTGAVMAVYGRDVAESMVPVEYEGEGEQPVAGVEGLVSHPET----NRAGS 252
Query: 168 QYF--FVNDRPVDLPKVSKLVNELY-KGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVF 224
+Y V+ R V V + V + Y G +YP A+++ +P DVNV P K +V
Sbjct: 253 EYVTTLVDGRYVTASAVREAVVDAYGDGLAPDRYPFAVVDLRLPPGGVDVNVHPRKLEVL 312
Query: 225 FSDECSILHALREGLQ 240
F++E ++ A+ E ++
Sbjct: 313 FAEEAAVKSAVTEAVE 328
>gi|448456400|ref|ZP_21595203.1| DNA mismatch repair protein MutL [Halorubrum lipolyticum DSM 21995]
gi|445812585|gb|EMA62578.1| DNA mismatch repair protein MutL [Halorubrum lipolyticum DSM 21995]
Length = 752
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 102/217 (47%), Gaps = 25/217 (11%)
Query: 596 RALAAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQ 655
R L +T ER + + ++V+GQ + +++ + L ++DQHAADE+ N+ERL
Sbjct: 534 RTLDGESTSAERTY--DSLPPLRVLGQLHETYVVAEAPDGLVLIDQHAADERVNYERLQA 591
Query: 656 STV--LNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFR-LKAVP 712
+ + Q L P++++LT E + +D + GF E AG R +++VP
Sbjct: 592 AFADGADAQALAEPVRIELTAREAALFEEFVDDLAGIGFRAER-----AGEREAVVRSVP 646
Query: 713 --FSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSI 770
F + G+ V+D++S L D+ D V +LA AC S+
Sbjct: 647 AVFDAALDPGL--VRDVLSALVDDAA-----------AGDEPVTDVVDELLADLACYPSV 693
Query: 771 MIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHL 807
+L + +L+ L +P+ CPHGRP + L
Sbjct: 694 TGNTSLTEGSVVDLLDRLDACENPYACPHGRPVVIRL 730
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 46/69 (66%)
Query: 10 PTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNG 69
P I +++ V RI AG+V++ +S VKEL+ENSLDAGAT + ++++ G E +V D+G
Sbjct: 4 PNIERLDERTVQRIAAGEVVERPASVVKELIENSLDAGATRVAVSVEAGGTEGIRVRDDG 63
Query: 70 CGISPNNFK 78
GI + +
Sbjct: 64 VGIPADQLE 72
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 71/167 (42%), Gaps = 18/167 (10%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICK 143
+ YAL GV V G+ T+G+ L+ ++ V+G + + VA
Sbjct: 177 VVTGYALANPGV-AVSLEHDGRET----FATEGNGDLRSAVLAVYGREVAEAMVDVAWAP 231
Query: 144 SDS------CKVEGFLSKPGQGSGRNLGDRQYF--FVNDRPVDLPKVSKLVNELYKGA-N 194
S V G +S P R+Y +VN R V + + V + Y G
Sbjct: 232 GGSETDPPVRGVTGLVSHPET----TRSTREYLATYVNGRYVTASALREAVLDAYGGQLA 287
Query: 195 SRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQE 241
+YP A++ VP DVNV P K +V F +E ++ A+ + ++E
Sbjct: 288 PDRYPFAVLFVEVPPGDVDVNVHPRKLEVRFDEEPAVREAVEDAVEE 334
>gi|448468148|ref|ZP_21599779.1| DNA mismatch repair protein MutL [Halorubrum kocurii JCM 14978]
gi|445810891|gb|EMA60905.1| DNA mismatch repair protein MutL [Halorubrum kocurii JCM 14978]
Length = 770
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 98/215 (45%), Gaps = 21/215 (9%)
Query: 596 RALAAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQ 655
R L +T ER + + ++V+GQ + +++ + L ++DQHAADE+ N+ERL
Sbjct: 552 RTLDGESTSAERTY--DSLPALRVLGQLHETYVVAEAPDGLVLIDQHAADERVNYERLRA 609
Query: 656 STV--LNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLR-FRLKAVP 712
+ + Q L P+++ LT E + ++ + GF E AG R + +VP
Sbjct: 610 AFADGADAQALAEPVRIALTAREAALFEEFVEDLAAVGFRAER-----AGEREVVVSSVP 664
Query: 713 FSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMI 772
F E V+D++S L D+ D V +LA AC S+
Sbjct: 665 AVFDAAFDPELVRDVLSALVDD-----------ATAGDEPVTDVVDELLADLACYPSVTG 713
Query: 773 GDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHL 807
+L + +L+ L +P+ CPHGRP + L
Sbjct: 714 NTSLTEGSVVNLLDRLDACENPYACPHGRPVVIRL 748
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 46/70 (65%)
Query: 10 PTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNG 69
P I +++ V RI AG+V++ +S VKEL+ENSLDAGA+ + ++++ G E +V D+G
Sbjct: 4 PNIERLDERTVQRIAAGEVVERPASVVKELIENSLDAGASRVAVSVEAGGTEGVRVRDDG 63
Query: 70 CGISPNNFKV 79
GI + +
Sbjct: 64 VGIPEDQLEA 73
Score = 45.8 bits (107), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 60/146 (41%), Gaps = 20/146 (13%)
Query: 112 LKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCK-------------VEGFLSKPGQ 158
T+G+ L+ ++ V+G + + VA V G +S P
Sbjct: 200 FATEGNGDLRSAVLAVYGREVAEAMVDVAWAPDGDGDPTGPDAADPPVRGVSGLVSHPET 259
Query: 159 GSGRNLGDRQYF--FVNDRPVDLPKVSKLVNELYKGA-NSRQYPIAIMNFIVPTRACDVN 215
R+Y +VN R V + + V + Y G +YP A++ VP DVN
Sbjct: 260 ----TRSTREYLATYVNGRYVTASALREAVLDAYGGQLAPDRYPFAVLFVEVPPGDVDVN 315
Query: 216 VTPDKRKVFFSDECSILHALREGLQE 241
V P K +V F +E ++ A+ ++E
Sbjct: 316 VHPRKLEVRFDEEPAVREAVEGAVEE 341
>gi|417885087|ref|ZP_12529246.1| DNA mismatch repair protein, C-terminal domain protein
[Lactobacillus oris F0423]
gi|341596383|gb|EGS38986.1| DNA mismatch repair protein, C-terminal domain protein
[Lactobacillus oris F0423]
Length = 675
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 98/211 (46%), Gaps = 23/211 (10%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQ---STVLNQQPLLRPLKL 670
F ++ IGQ F++ + L+IVDQHAA E+ N+ER Q +QQ L PL L
Sbjct: 469 FPELQYIGQLQGTFLLAQASDGLYIVDQHAAQERINYERYRQEIGQVSADQQTFLVPLVL 528
Query: 671 DLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIST 730
+ + + + S H D++ G LE F L++ P K + V+++I
Sbjct: 529 NYSTVDALAISNHADVLASVGLHLEH----FGQNSFLLRSHPTWFKEGQEEDTVREMIDW 584
Query: 731 LADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLAD 790
+ + G+ + + ++M TA M+ +C+ +I L E + +L L
Sbjct: 585 IIKD-GKLT-VQQFRMKTA---------IMM---SCKRAIKANHHLDDREARALLHRLPQ 630
Query: 791 LNSPWNCPHGRPTMRHL--VDLTTIRKNIDE 819
+P+NCPHGRP H DL + K I E
Sbjct: 631 CENPFNCPHGRPVTVHFNDRDLEKMFKRIQE 661
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 46/68 (67%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I +N + +I AG+VI+ +S VKELVENSLDA + ++I ++ G + +V+D+G G
Sbjct: 4 IHELNDILADQIAAGEVIERPASIVKELVENSLDAQSKRVDIIVENAGLDSIRVIDDGQG 63
Query: 72 ISPNNFKV 79
I+ ++ ++
Sbjct: 64 IAADDVEL 71
Score = 43.9 bits (102), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 71/162 (43%), Gaps = 19/162 (11%)
Query: 73 SPNNFKVRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNI 132
SP R + AL V F T+ GK + ++ G+ +L+ I T++G+
Sbjct: 163 SPQTELARITDIINRLALANPQVAFSFTHN-GKEI----FRSAGNDNLQQVIATIYGIQA 217
Query: 133 YNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYF--FVNDRPVDLPKVSKLVNELY 190
+ V +D +V GF+S P RQY +N R V + L +
Sbjct: 218 GRKMLAVQGTDND-FRVTGFVSLPELTRA----SRQYITIMINHRYV---RNYALTKAII 269
Query: 191 KGANSR----QYPIAIMNFIVPTRACDVNVTPDKRKVFFSDE 228
+G S+ +YP+A++N + DVNV P KR+V S E
Sbjct: 270 QGYESKLMVGRYPVAVINIDLDPVLVDVNVHPAKREVRLSKE 311
>gi|448488432|ref|ZP_21607268.1| DNA mismatch repair protein MutL [Halorubrum californiensis DSM
19288]
gi|445696122|gb|ELZ48215.1| DNA mismatch repair protein MutL [Halorubrum californiensis DSM
19288]
Length = 786
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 100/217 (46%), Gaps = 21/217 (9%)
Query: 594 KARALAAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERL 653
+ R L TE ER F + ++++GQ + +++ + L ++DQHAADE+ N+ERL
Sbjct: 566 RQRTLDGDGTESEREF--DSLPSLRLLGQLHETYVVAEAPDGLVLIDQHAADERVNYERL 623
Query: 654 SQ--STVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLR-FRLKA 710
+ + Q L P++++LT E + +D + + GF E AG R + A
Sbjct: 624 KAVFADGADAQALAEPVRIELTAREAALFEEFVDDLAEIGFRAER-----AGDREVAVTA 678
Query: 711 VPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSI 770
VP + ++D++S L D+ D V +LA AC S+
Sbjct: 679 VPAVFDAALDPDLLRDVLSALVDDAA-----------AGDEPVADVVDELLADLACYPSV 727
Query: 771 MIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHL 807
+L + +L+ L +P+ CPHGRP + L
Sbjct: 728 TGNTSLTEGRVVDLLDRLDACENPYACPHGRPVVIRL 764
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 46/70 (65%)
Query: 10 PTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNG 69
P I +++ V RI AG+V++ +S VKELVENSLDAGA+ + ++++ G E +V D+G
Sbjct: 4 PDIERLDERTVQRIAAGEVVERPASVVKELVENSLDAGASRVAVSVESGGTEGIRVRDDG 63
Query: 70 CGISPNNFKV 79
GI + +
Sbjct: 64 VGIPADQLEA 73
Score = 42.7 bits (99), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 60/145 (41%), Gaps = 16/145 (11%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDS-------------CKVEGFLSKPG 157
T+G+ L+ ++ V+G + + V +V G +S P
Sbjct: 199 TFATEGNGDLRSAVLAVYGREVAESMIDVDWTPERKEDADGSADDDAPVKRVTGLVSHPE 258
Query: 158 QGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGA-NSRQYPIAIMNFIVPTRACDVNV 216
+ R+ D +VN R V + + + Y G +YP A++ VP DVNV
Sbjct: 259 --TARSTRDYLSTYVNGRYVTASALREATLDAYGGQLAPDRYPFAVLFVEVPAGDVDVNV 316
Query: 217 TPDKRKVFFSDECSILHALREGLQE 241
P K +V F +E ++ A+ ++E
Sbjct: 317 HPRKLEVRFDEEPAVREAVETAVEE 341
>gi|427407123|ref|ZP_18897328.1| DNA mismatch repair protein MutL [Selenomonas sp. F0473]
gi|425707598|gb|EKU70642.1| DNA mismatch repair protein MutL [Selenomonas sp. F0473]
Length = 624
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 26/211 (12%)
Query: 615 GRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQST--VLNQQPLLRPLKLDL 672
G + IGQ +L +I+ + Q L+I+DQHAA E+ F+R S + +QQ L+ + L
Sbjct: 433 GGLLPIGQVDLTYIVAQSAQALYIIDQHAAHERILFDRFSARAEGIPSQQMLVHAI-LSF 491
Query: 673 TPEEEVVASMHMDIIRKNGFSLEEDPHALAGLR-FRLKAVPFSKKITFGVEDVKDLISTL 731
E + ++ + GF LE AG R +RL P +++++ +L
Sbjct: 492 DAREAQYIEENSELFSRLGFRLEP-----AGDREYRLTEAPADVPTDEAEHVIREILVSL 546
Query: 732 ADNQGECSIISSYKMDTADSVCPSRVR-AMLASRACRSSIMIGDALGRNEMQKILEHLAD 790
D + P+ +R A LA+ ACR++I G+ L +M+ +LE L
Sbjct: 547 GDLH---------------AATPAELRQAALATMACRAAIKAGEELNFRQMEILLEELRG 591
Query: 791 LNSPWNCPHGRPTMRHLVDLTTIRKNIDENG 821
P+ CPHGRPT+ D T + K G
Sbjct: 592 TPFPFTCPHGRPTILKF-DTTDLAKMFKRTG 621
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 70/142 (49%), Gaps = 11/142 (7%)
Query: 96 RFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAIC-KSDSCKVEGFLS 154
RFV N + L T G SL+ I +++G + L P+ ++ ++ G++S
Sbjct: 188 RFVNNN-------RLTLMTAGDDSLRRTIESIYGGDAAGALIPLDFTDEAGDIRITGYIS 240
Query: 155 KPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQ-YPIAIMNFIVPTRACD 213
KP R+ Q + VN R + ++K V+ +Y+ + +P+A++ VP R D
Sbjct: 241 KPSMI--RSSRAWQTYIVNGRTIQNRAIAKAVDNVYRSLVPKMGFPLAVLRIEVPQRTID 298
Query: 214 VNVTPDKRKVFFSDECSILHAL 235
VNV P K ++ F DE I A+
Sbjct: 299 VNVHPQKTEMKFEDEGRIFKAV 320
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 44/62 (70%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I ++ +++I AG+V++ +S VKELVEN++DAGAT++E+ + G + +V DNG G
Sbjct: 4 IHVLDDATINKIAAGEVVERPASVVKELVENAIDAGATAVEVEIMGGGTSFIRVTDNGRG 63
Query: 72 IS 73
++
Sbjct: 64 MA 65
>gi|302391924|ref|YP_003827744.1| DNA mismatch repair protein MutL [Acetohalobium arabaticum DSM
5501]
gi|302204001|gb|ADL12679.1| DNA mismatch repair protein MutL [Acetohalobium arabaticum DSM
5501]
Length = 660
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 112/232 (48%), Gaps = 38/232 (16%)
Query: 590 NEERKARALAAATTELERLFRKED----FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAAD 645
NE+ K + A E + + K+D +GQ + +II + + +IVDQHAA
Sbjct: 441 NEKEKKNKESVAIKESQSDYNKDDATKSLSSFLPLGQIHNTYIIAQGEDGFYIVDQHAAH 500
Query: 646 EK--YN--FERLSQSTVLNQQPLLRPLKLDLT-PEEEVVA--SMHMDIIRKN-GFSLEED 697
E+ YN E+ Q+ + Q LL P++L+LT PE E++ S H+ KN GF E
Sbjct: 501 ERILYNELMEKFKQAEI-KSQSLLMPVRLELTNPEIEILEENSEHL----KNLGFEFE-- 553
Query: 698 PHALAGLRFRLKAVP-FSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSR 756
A G + ++AVP K+ D+K+L + DN +D P+
Sbjct: 554 --AFGGQTYLVRAVPNLLHKL-----DIKELCLDIIDNL----------LDKGKIQEPTE 596
Query: 757 V-RAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHL 807
+ +L +CR +I G +L EM+ +L+ L + + CPHGRPT+ H
Sbjct: 597 IIEDLLVIMSCRGAIKSGKSLVPGEMESLLQQLEESGNQHTCPHGRPTIIHF 648
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 99/221 (44%), Gaps = 36/221 (16%)
Query: 47 GATSIEIALKEYGEEWFQVVDNGCGISPN--------NFKVRAVFL-------------C 85
G T ++I G E ++ D GC I N N VR +L
Sbjct: 121 GGTLVKIN----GGEIKKIEDAGCPIGTNIIVKDLFYNTPVRYKYLKTSATEIRRISDIV 176
Query: 86 QAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSD 145
AL + F ++ K VL+T G+ +L D I++V+G + + +A+ D
Sbjct: 177 NRLALAYPEITFKLSHNQKK-----VLETPGNGNLMDTILSVYGKEVAKSM--IAVDYED 229
Query: 146 S-CKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSR-QYPIAIM 203
+V G++SKP R Q FF+N R + +S+ +++ Y ++ ++PIAI+
Sbjct: 230 KYMQVSGYVSKPN--ISRASKKHQSFFINRRYIKSRALSEAISKAYHTLLAKGRHPIAIL 287
Query: 204 NFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYS 244
+ DVNV P K +V FS E + L+ G++E S
Sbjct: 288 TIKLNPVLVDVNVHPTKMEVNFSREKEVASVLQNGVKEALS 328
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 43/62 (69%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ + + VV +I AG+VI+ +S VKELVENS+DA + IEI + G++ QV+D G G
Sbjct: 5 IKKLPQEVVSKIAAGEVIERPASVVKELVENSIDADSDKIEIKVNNGGKDLIQVIDTGYG 64
Query: 72 IS 73
++
Sbjct: 65 MT 66
>gi|448734128|ref|ZP_21716355.1| DNA mismatch repair protein MutL [Halococcus salifodinae DSM 8989]
gi|445800637|gb|EMA50986.1| DNA mismatch repair protein MutL [Halococcus salifodinae DSM 8989]
Length = 554
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 86/194 (44%), Gaps = 26/194 (13%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQS--TVLNQQPLLRPLKLD 671
F + VIGQF +++ + D DL +VDQHAA E+ NFERL ++ ++ P + P L
Sbjct: 364 FDAIGVIGQFRDLYLLCEADDDLLVVDQHAAHERINFERLREALDDGIDSVP-IEPTSLS 422
Query: 672 LTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTL 731
LT E + + + + GF +E D A +R +P V D++
Sbjct: 423 LTAAEAALVDANAEALDALGFRIEADSGA-----YRATGLPAPLGRVAEPSAVHDVLDAF 477
Query: 732 ADNQGECSIISSYKMDTADSVCPSRVR-AMLASRACRSSIMIGDALGRNEMQKILEHLAD 790
G P R +L AC S+ GD+L + +++E L
Sbjct: 478 LAGDG-----------------PENPREELLKDVACHPSLKAGDSLTGEDAARLVERLGA 520
Query: 791 LNSPWNCPHGRPTM 804
P+ CPHGRPT+
Sbjct: 521 CEQPFACPHGRPTV 534
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 42/60 (70%)
Query: 20 VHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFKV 79
+ RI AG+V+ +S V ELVEN+LDAGA SIEIA++ G + QV D+G G++ + ++
Sbjct: 12 IERIAAGEVVTRPASVVTELVENALDAGADSIEIAVENAGLDLVQVADDGHGMTEADARL 71
Score = 43.1 bits (100), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 68/174 (39%), Gaps = 17/174 (9%)
Query: 88 YALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCL---------EP 138
YAL VRF T+ VL T GS S D I+ V+ + E
Sbjct: 178 YALTHPDVRFSLTHD-----DRTVLSTPGSMSYTDAILGVYDREAASQSTVFRRGDEDEG 232
Query: 139 VAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGA-NSRQ 197
SD V G + P R+ +N R +D V V Y +
Sbjct: 233 GDNQSSDGVSVSGLVVYPSIT--RSTPAHVTTAINGRALDDTTVRNAVTRGYGSLLPDDR 290
Query: 198 YPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASYS 251
YPIA+++ +P DVNV P K +V F+D ++ + + + + + +++
Sbjct: 291 YPIAVVDVALPPEQVDVNVHPSKDEVAFADPDAVAEVVEQAVSAALATQDLAHT 344
>gi|291550403|emb|CBL26665.1| DNA mismatch repair protein MutL [Ruminococcus torques L2-14]
Length = 708
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 99/204 (48%), Gaps = 21/204 (10%)
Query: 605 LERLFRKEDF-GRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERL---SQSTVLN 660
E F K D K+IGQ + + + +L+I+DQHAA E+ +ER +S
Sbjct: 506 FEENFLKRDIRAEYKLIGQVFDTYWLVEFKDNLYIIDQHAAHERVLYERTLREMKSREFT 565
Query: 661 QQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFG 720
Q L P+ L L+ +E + + +MD + GF +E G + ++AVP
Sbjct: 566 SQYLSPPIILSLSMQEAQLLNENMDRFSRIGFEIE----PFGGEEYAVRAVP-------- 613
Query: 721 VEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNE 780
D + ++A + +I + S+ P + +AS +C++++ + L E
Sbjct: 614 -----DNLFSIAKKELLMEMIDDLTEGLSTSMTPELIDEKVASLSCKAAVKGNNRLSAQE 668
Query: 781 MQKILEHLADLNSPWNCPHGRPTM 804
+ K++ L L++P++CPHGRPT+
Sbjct: 669 VDKLIGELLTLDNPYHCPHGRPTI 692
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 53/75 (70%), Gaps = 2/75 (2%)
Query: 10 PTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNG 69
P I +++ + +I AG+VI+ +S VKELVEN++DAG+TS++I +K+ G + ++ DNG
Sbjct: 2 PHIHVLDQITIDKIAAGEVIERPASIVKELVENAIDAGSTSVKIEIKDGGISFIRITDNG 61
Query: 70 CGISPNNFKVRAVFL 84
CGI + +V+ FL
Sbjct: 62 CGIPQD--EVQRAFL 74
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 75/153 (49%), Gaps = 21/153 (13%)
Query: 112 LKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSG-RNLGDRQYF 170
L+T G+ LKD I V+G ++ L + K + + GFL KP G RN + F
Sbjct: 197 LRTSGNGKLKDVIYNVYGRDVAANLIEIDYEK-NGIHITGFLGKPIITRGNRNF---ENF 252
Query: 171 FVNDRPVDLPKVSKLVNELYKG-ANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDEC 229
FVN R V +SK V + Y+ ++P A+++F + D+NV P K ++ FS +
Sbjct: 253 FVNGRYVKSAMISKSVEDAYRDFVMQHKFPFAVLHFHLSGENVDINVHPTKMELRFSRQ- 311
Query: 230 SILHALREGLQEIYSPNNASYSVNKVEQLIEPE 262
QE+Y N +V++ L+EPE
Sbjct: 312 ----------QEVY--NTVFEAVHRT--LLEPE 330
>gi|336426863|ref|ZP_08606871.1| hypothetical protein HMPREF0994_02877 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336010503|gb|EGN40486.1| hypothetical protein HMPREF0994_02877 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length = 737
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 96/202 (47%), Gaps = 21/202 (10%)
Query: 606 ERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERL---SQSTVLNQQ 662
E+L KE +++GQ + + + + L +DQHAA EK +E L ++ ++ Q
Sbjct: 538 EKLLTKEAVQSFRILGQVFDTYWLAQYEDKLLFIDQHAAHEKVKYEALINKMKTGTVDSQ 597
Query: 663 PLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVE 722
L P+ L+L+ E + + + GF ++E G + +++VP + E
Sbjct: 598 MLTPPIVLNLSAREAHLLERYESYFAQMGFEIDE----FGGNAYTVRSVPCDLYGHYEKE 653
Query: 723 DVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQ 782
++ ++ L + + PS + LAS AC+S++ + EM+
Sbjct: 654 FIEAILDELEEEPPHGT--------------PSVIAEKLASMACKSAVKGNHTMSFREME 699
Query: 783 KILEHLADLNSPWNCPHGRPTM 804
+L+ L L +P++CPHGRPT+
Sbjct: 700 ALLDQLLKLENPYHCPHGRPTI 721
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 69/134 (51%), Gaps = 6/134 (4%)
Query: 110 VVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQ-GSGRNLGDRQ 168
V T G+ +++ + ++G I L P + +++ ++EGFL P S RN +
Sbjct: 195 VRFHTSGNGDIREILYRIYGREIIKELIPFS-AQAEGLQIEGFLGSPSVVRSNRNF---E 250
Query: 169 YFFVNDRPVDLPKVSKLVNELYKGA-NSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSD 227
+FFVN R + P +SK + YK ++P A+++F + DVNV P K ++ F D
Sbjct: 251 FFFVNGRYIKSPLLSKGLEAGYKAYLMQHKFPFALLHFTIDPDRIDVNVHPSKMEIRFHD 310
Query: 228 ECSILHALREGLQE 241
+ + L E ++E
Sbjct: 311 QPGLYAFLEEKVRE 324
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Query: 15 INKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISP 74
++ + +I AG+V++ SS VKELVEN++DAGA ++ + +KE G + +V DNG GI
Sbjct: 7 LDSSTIDKIAAGEVVERPSSVVKELVENAMDAGARAVTVEIKEGGCSFIRVTDNGGGIEK 66
Query: 75 NNFKVRAVFLCQAYALI 91
+VR F A + I
Sbjct: 67 E--QVRKAFFRHATSKI 81
>gi|331084835|ref|ZP_08333923.1| hypothetical protein HMPREF0987_00226 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330410929|gb|EGG90351.1| hypothetical protein HMPREF0987_00226 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 691
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 102/203 (50%), Gaps = 22/203 (10%)
Query: 606 ERLFRKEDFGRMKVIGQ-FNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQ--- 661
++L KE ++GQ F +I+ DQ ++I+DQHAA E+ +ER + Q
Sbjct: 491 QKLLSKEAKQEYTLVGQVFETYWIVEYRDQ-MYIIDQHAAHERVLYERTLKRMKEKQFTS 549
Query: 662 QPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGV 721
Q + P+ L+L+ +EE + S HM+ K GF +E G + ++AVP
Sbjct: 550 QRISPPIVLNLSMQEEQLLSEHMENFTKIGFEIE----PFGGDSYAVRAVP--------- 596
Query: 722 EDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEM 781
D + ++A ++ S + ++ P V +AS +C++++ L E+
Sbjct: 597 ----DNLFSIAKKDLLIEMLDSLSDSISTNLAPDIVLEKIASMSCKAAVKGNSRLSGREV 652
Query: 782 QKILEHLADLNSPWNCPHGRPTM 804
++ L +L++P++CPHGRPT+
Sbjct: 653 DALIGELLELDNPYHCPHGRPTI 675
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 45/63 (71%)
Query: 10 PTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNG 69
P I+ +++ + +I AG+VI+ +S VKELVEN++DA AT+I + +K+ G ++ DNG
Sbjct: 2 PNIQVLDQVTIDKIAAGEVIERPASIVKELVENAIDAKATAITVEIKDGGISLIRIADNG 61
Query: 70 CGI 72
CGI
Sbjct: 62 CGI 64
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 70/137 (51%), Gaps = 10/137 (7%)
Query: 112 LKTQGSSSLKDNIITVFGMNIY-NCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQY- 169
L T G+ LKD I ++G +I N LE A K++ + G++ KP G +R Y
Sbjct: 197 LHTSGNGRLKDVIYHIYGRDITGNLLEINA--KANGVAIRGYIGKPLISRG----NRNYE 250
Query: 170 -FFVNDRPVDLPKVSKLVNELYKGAN-SRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSD 227
+++N R V ++K + + YKG +YP +++F + DVNV P K +V FS
Sbjct: 251 NYYINGRYVKSSIIAKAIEDAYKGFTMQHKYPFTVLHFTIDGTDLDVNVHPTKMEVRFSK 310
Query: 228 ECSILHALREGLQEIYS 244
+ + + + L++ S
Sbjct: 311 QQEVYNFIYNTLKDALS 327
>gi|259502856|ref|ZP_05745758.1| DNA mismatch repair protein HexB [Lactobacillus antri DSM 16041]
gi|259169223|gb|EEW53718.1| DNA mismatch repair protein HexB [Lactobacillus antri DSM 16041]
Length = 675
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 100/212 (47%), Gaps = 23/212 (10%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQ---STVLNQQPLLRPLKL 670
F ++ IGQ F++ + L+IVDQHAA E+ N+ER Q +QQ L PL L
Sbjct: 469 FPDLQYIGQLQGTFLLAQASDGLYIVDQHAAQERINYERYRQEIGQVSADQQTFLVPLVL 528
Query: 671 DLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIST 730
+ + + + + H D++ G LE F L++ P K + V+++I
Sbjct: 529 NYSTVDALTITNHADVLASVGLRLEH----FGQNSFLLRSHPTWFKEGQEEDTVREMIDW 584
Query: 731 LADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLAD 790
L + G+ + + ++M TA M+ +C+ +I L E + +L+ L
Sbjct: 585 LIKD-GKLT-VQQFRMKTA---------IMM---SCKRAIKANRHLDDREARALLKRLPQ 630
Query: 791 LNSPWNCPHGRPTMRHL--VDLTTIRKNIDEN 820
+P+NCPHGRP H DL + K I E+
Sbjct: 631 CENPFNCPHGRPVTVHFNDRDLEKMFKRIQES 662
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 46/68 (67%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I +N + +I AG+VI+ +S VKELVENSLDA + ++I ++ G + +V+D+G G
Sbjct: 4 IHELNDILADQIAAGEVIERPASIVKELVENSLDAQSQRVDIIVENAGLDSIRVIDDGQG 63
Query: 72 ISPNNFKV 79
I+ ++ ++
Sbjct: 64 IAADDVEL 71
Score = 43.1 bits (100), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 74/163 (45%), Gaps = 21/163 (12%)
Query: 73 SPNNFKVRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNI 132
SP+ R + AL V F T+ GK + ++ G+ +L+ I T++G+
Sbjct: 163 SPHTELARITDIINRLALANPQVAFSFTHN-GKEL----FRSAGNGNLQQVIATIYGIQA 217
Query: 133 YNCLEPVAICKSDS-CKVEGFLSKPGQGSGRNLGDRQYF--FVNDRPVDLPKVSKLVNEL 189
+ +AI +D+ V GF+S P RQY +N R V + L +
Sbjct: 218 GRKM--LAIQGTDNDFAVTGFVSLPE----LTRASRQYITIMINHRYV---RNYALTKAI 268
Query: 190 YKGANSR----QYPIAIMNFIVPTRACDVNVTPDKRKVFFSDE 228
+G S+ +YP+A++N + DVNV P KR+V S E
Sbjct: 269 IQGYESKLMVGRYPVAVLNIELDPVLVDVNVHPAKREVRLSKE 311
>gi|253701877|ref|YP_003023066.1| DNA mismatch repair protein [Geobacter sp. M21]
gi|259509935|sp|C6E4L2.1|MUTL_GEOSM RecName: Full=DNA mismatch repair protein MutL
gi|251776727|gb|ACT19308.1| DNA mismatch repair protein MutL [Geobacter sp. M21]
Length = 650
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 90/197 (45%), Gaps = 20/197 (10%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTV---LNQQPLLRPLKL 670
F + VIGQFN +I+ + DL ++DQHAA E+ FE+L ++ Q LL P +
Sbjct: 459 FSSLGVIGQFNASYILCQRGTDLILIDQHAAHERVAFEKLKGQFAGREVDSQGLLFPETM 518
Query: 671 DLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIST 730
+ + E V H + + GF EE G + LK VP T V+ ++D++
Sbjct: 519 EFSFRESAVLREHQAELARLGFEFEE----FGGNTWLLKGVPQVLSATRYVDTIRDILEE 574
Query: 731 LADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLAD 790
L G S ++ D +LA AC S + L E+ + + + +
Sbjct: 575 L----GSLSRSRAFSDIQED---------LLARIACHSVVRGKRTLSPVEIAALFKQMDE 621
Query: 791 LNSPWNCPHGRPTMRHL 807
+ NCPHGRP M+ L
Sbjct: 622 TDFSSNCPHGRPVMQTL 638
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 43/65 (66%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR + + + ++I AG+V++ +S KELVEN+LDAG+ + + ++ G +V D GCG
Sbjct: 5 IRILPENLTNKIAAGEVVERPASVAKELVENALDAGSKEVVVEIESGGRRLIKVSDTGCG 64
Query: 72 ISPNN 76
+S ++
Sbjct: 65 MSRDD 69
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 71/149 (47%), Gaps = 10/149 (6%)
Query: 95 VRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLS 154
VRF T KN V+ + + LK+ + T+ G +I + L PV+ + KV G ++
Sbjct: 186 VRF-----TYKNDGKVMFRAL-DADLKERVATMLGRSISSFLYPVSY-QEGGLKVSGLVA 238
Query: 155 KPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSR-QYPIAIMNFIVPTRACD 213
P R+ G Y ++N R + V + + Y+ R +YP+ + + D
Sbjct: 239 APE--CSRSAGSHLYTYINGRFIKDKVVQHAILQAYRNFLERGRYPVVAVFIDIAPGEVD 296
Query: 214 VNVTPDKRKVFFSDECSILHALREGLQEI 242
VNV P K +V F ++ + A+++ ++ +
Sbjct: 297 VNVHPTKHEVRFREQGRVHDAIQKAVESV 325
>gi|325661607|ref|ZP_08150231.1| hypothetical protein HMPREF0490_00965 [Lachnospiraceae bacterium
4_1_37FAA]
gi|325472134|gb|EGC75348.1| hypothetical protein HMPREF0490_00965 [Lachnospiraceae bacterium
4_1_37FAA]
Length = 691
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 102/203 (50%), Gaps = 22/203 (10%)
Query: 606 ERLFRKEDFGRMKVIGQ-FNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQ--- 661
++L KE ++GQ F +I+ DQ ++I+DQHAA E+ +ER + Q
Sbjct: 491 QKLLSKEAKQEYTLVGQVFETYWIVEYRDQ-MYIIDQHAAHERVLYERTLKRMKEKQFTS 549
Query: 662 QPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGV 721
Q + P+ L+L+ +EE + S HM+ K GF +E G + ++AVP
Sbjct: 550 QRISPPIVLNLSMQEEQLLSEHMENFTKIGFEIE----PFGGDSYAVRAVP--------- 596
Query: 722 EDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEM 781
D + ++A ++ S + ++ P V +AS +C++++ L E+
Sbjct: 597 ----DNLFSIAKKDLLIEMLDSLSDSISTNLAPDIVLEKIASMSCKAAVKGNSRLSGREV 652
Query: 782 QKILEHLADLNSPWNCPHGRPTM 804
++ L +L++P++CPHGRPT+
Sbjct: 653 DALIGELLELDNPYHCPHGRPTI 675
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 45/63 (71%)
Query: 10 PTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNG 69
P I+ +++ + +I AG+VI+ +S VKELVEN++DA AT+I + +K+ G ++ DNG
Sbjct: 2 PNIQVLDQVTIDKIAAGEVIERPASIVKELVENAIDAKATAITVEIKDGGISLIRIADNG 61
Query: 70 CGI 72
CGI
Sbjct: 62 CGI 64
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 70/137 (51%), Gaps = 10/137 (7%)
Query: 112 LKTQGSSSLKDNIITVFGMNIY-NCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQY- 169
L T G+ LKD I ++G +I N LE A K++ + G++ KP G +R Y
Sbjct: 197 LHTSGNGRLKDVIYHIYGRDITGNLLEINA--KANGVAIRGYIGKPLISRG----NRNYE 250
Query: 170 -FFVNDRPVDLPKVSKLVNELYKGAN-SRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSD 227
+++N R V ++K + + YKG +YP +++F + DVNV P K +V FS
Sbjct: 251 NYYINGRYVKSSIIAKAIEDAYKGFTMQHKYPFTVLHFTIDGTDLDVNVHPTKMEVRFSK 310
Query: 228 ECSILHALREGLQEIYS 244
+ + + + L++ S
Sbjct: 311 QQEVYNFIYNTLKDALS 327
>gi|260587681|ref|ZP_05853594.1| DNA mismatch repair protein MutL [Blautia hansenii DSM 20583]
gi|331084030|ref|ZP_08333137.1| hypothetical protein HMPREF0992_02061 [Lachnospiraceae bacterium
6_1_63FAA]
gi|260541946|gb|EEX22515.1| DNA mismatch repair protein MutL [Blautia hansenii DSM 20583]
gi|330402392|gb|EGG81962.1| hypothetical protein HMPREF0992_02061 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 636
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 100/202 (49%), Gaps = 23/202 (11%)
Query: 607 RLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERL----SQSTVLNQQ 662
RL KE ++IGQ + + + D +I+DQHAA EK +ER ++ +L+Q
Sbjct: 438 RLLSKEARIHHRIIGQLFDTYWLVEYDNKFYIIDQHAAHEKVLYERFLKEFAKKEILSQM 497
Query: 663 PLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVE 722
+ P + L +E + +++I R+ GF + E G + + AVP + +GV
Sbjct: 498 -ISPPSLISLNLQESNLLKANLEIFREFGFEISE----FGGKEYSIHAVPAN---IYGV- 548
Query: 723 DVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQ 782
V++L + D+ + + S P + +A+ AC++++ + L E
Sbjct: 549 SVQELFIQILDSLEQEHV----------SKTPDILAERIATAACKAAVKGNNRLSVKEAD 598
Query: 783 KILEHLADLNSPWNCPHGRPTM 804
+++ L L +P+NCPHGRPT+
Sbjct: 599 ALIDELLSLENPYNCPHGRPTI 620
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 55/93 (59%), Gaps = 2/93 (2%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I +++ + +I AG+V++ +S VKELVEN++DAGAT+I + +KE G + +V DNG G
Sbjct: 4 IAVLSQNTIDKIAAGEVVERPASVVKELVENAIDAGATAITVEIKEGGISFIRVTDNGGG 63
Query: 72 ISPNNFKVRAVFLCQAYALIAKGVRFVCTNTTG 104
I +V FL A + I + + + G
Sbjct: 64 IPKE--QVPLAFLRHATSKITQAEDLLQITSLG 94
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 62/125 (49%), Gaps = 6/125 (4%)
Query: 112 LKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSG-RNLGDRQYF 170
L T G+++LKD I ++G +I L PV + V GF+ KP G RN + +
Sbjct: 197 LHTSGNANLKDVIYGIYGRDITRELLPVQ-YEVSGLSVSGFIGKPSIARGNRNFEN---Y 252
Query: 171 FVNDRPVDLPKVSKLVNELYK-GANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDEC 229
++N R V + K + E YK +YP + + + DVNV P K +V F ++
Sbjct: 253 YINGRYVKSKLLMKAIEEAYKPYMMQHKYPFVCLQYDIHGEDVDVNVHPTKMEVRFKNQS 312
Query: 230 SILHA 234
+I +A
Sbjct: 313 AIYNA 317
>gi|295696239|ref|YP_003589477.1| DNA mismatch repair protein MutL [Kyrpidia tusciae DSM 2912]
gi|295411841|gb|ADG06333.1| DNA mismatch repair protein MutL [Kyrpidia tusciae DSM 2912]
Length = 661
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 102/205 (49%), Gaps = 25/205 (12%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTV---LNQQPLLRPLKLDLT 673
++ + Q +I+ + + LF++DQHAA EK +ER S+ + PLL P+ ++L+
Sbjct: 471 LRAVAQVLNLYIVAEAENSLFLIDQHAAHEKILYERFSRQITRREVGPMPLLVPITVELS 530
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
E + H+D++++ G + E P L R VP + D +D+ + +
Sbjct: 531 VAEMHRLAPHLDMMQEYGLTAE--PFGDNALVVR--TVP-------DIWDGQDITALTRE 579
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNS 793
EC + D R+ + +RACR ++ G L EMQ + + L +L++
Sbjct: 580 FLTEC-VERPMGQDPR-----KRLEQGVITRACRGAVKAGQPLSMPEMQALCDQLRELDN 633
Query: 794 PWNCPHGRPTMRHLVDLTTIRKNID 818
P++CPHGRPT+ L R+++D
Sbjct: 634 PFSCPHGRPTI-----LQWTRRDLD 653
Score = 60.1 bits (144), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 44/58 (75%)
Query: 15 INKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGI 72
++ G+ +RI AG+V++ +S VKEL+ENS+DA AT I +A++E G + +VVD+G G+
Sbjct: 7 LDPGLSNRIAAGEVVERPASVVKELIENSIDAQATHIRVAVEEAGMKTIRVVDDGTGM 64
>gi|404496910|ref|YP_006721016.1| DNA mismatch repair protein [Geobacter metallireducens GS-15]
gi|403378082|gb|ABB32282.2| DNA mismatch repair protein MutL [Geobacter metallireducens GS-15]
Length = 594
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 93/197 (47%), Gaps = 20/197 (10%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTV---LNQQPLLRPLKL 670
F R+ +IGQF+ +I+ + DL I+DQHAA E+ FERL + Q LL P L
Sbjct: 404 FSRLAIIGQFHASYILCQDGSDLVIIDQHAAHERVAFERLKAQFAAGGVEGQGLLFPDTL 463
Query: 671 DLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIST 730
+L+ E H + +R+ GF L+E G + +K VP ++ G KD +
Sbjct: 464 ELSHREVAELREHGEELRRIGFDLDE----FGGTTWVVKGVP---RLLAG----KDYLRI 512
Query: 731 LADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLAD 790
L D E + + + AD+ V +L AC S + L +++ + +
Sbjct: 513 LRDTLEEFQAVGANR-SVADA-----VEEILTRIACHSVVRGEHPLTTAQIEALFAQMDA 566
Query: 791 LNSPWNCPHGRPTMRHL 807
+ NCPHGRP ++ L
Sbjct: 567 TDYSTNCPHGRPVLQRL 583
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 42/65 (64%)
Query: 9 SPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDN 68
S IR + + + ++I AG+V++ +S VKELVENSLDAG I + ++ G +V D+
Sbjct: 2 STQIRILPENLTNKIAAGEVVERPASVVKELVENSLDAGCRDIIVEIEAGGRRLIRVTDD 61
Query: 69 GCGIS 73
G G+S
Sbjct: 62 GSGMS 66
Score = 47.4 bits (111), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 67/148 (45%), Gaps = 11/148 (7%)
Query: 95 VRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLS 154
VRF N GK V + + ++++ + + G I L P+ + V G ++
Sbjct: 186 VRFTYVND-GKTVFRAL-----NGTMEERVAALLGRTIAGALYPLD-STVEGVTVRGLVA 238
Query: 155 KPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSR-QYPIAIMNFIVPTRACD 213
+P R+ Y F+N R + V V + Y+ R +YP+ ++ VP D
Sbjct: 239 RPD--VSRSAAGHLYTFINGRFIRDRVVQHAVLQAYRNFLERGRYPVVVLFIQVPAGDVD 296
Query: 214 VNVTPDKRKVFFSDECSILHALREGLQE 241
VNV P K +V F + ++H + +G+ E
Sbjct: 297 VNVHPTKHEVRFRQQ-GVVHDVIQGVIE 323
>gi|222056190|ref|YP_002538552.1| DNA mismatch repair protein [Geobacter daltonii FRC-32]
gi|254766168|sp|B9M3N0.1|MUTL_GEOSF RecName: Full=DNA mismatch repair protein MutL
gi|221565479|gb|ACM21451.1| DNA mismatch repair protein MutL [Geobacter daltonii FRC-32]
Length = 598
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 100/220 (45%), Gaps = 25/220 (11%)
Query: 599 AAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERL-SQST 657
AA E+ER + F + VIGQFN +I+ + L I+DQHAA E+ FERL +Q
Sbjct: 397 AAPAPEVERGY----FSGLSVIGQFNAAYILCQDGNSLVIIDQHAAHERVAFERLKTQHA 452
Query: 658 VLN--QQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSK 715
+ Q LL P ++ + +E V H + + GFSLEE G + L AVP
Sbjct: 453 AMGVESQRLLFPETVEFSFKEGAVIREHQTELDRVGFSLEE----FGGSTWLLNAVPHLL 508
Query: 716 KITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDA 775
V+ ++D++ L + G D +LA AC S +
Sbjct: 509 SGNDYVKTLRDILEEL-QSLGRSRSFQDILED------------ILARIACHSVVRGSHC 555
Query: 776 LGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRK 815
L + E++ + + + NCPHGRP + H + L I +
Sbjct: 556 LSQQEIKALFQQMDTTEFSSNCPHGRPVL-HTLTLAEIER 594
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 70/149 (46%), Gaps = 10/149 (6%)
Query: 95 VRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLS 154
+RF+ TN GK V + ++ L++ + T+ G + L P+ C V G +
Sbjct: 186 IRFIYTND-GKTVFRAL-----NADLRERVATLLGRTLSQDLYPLDFCDGQ-LNVTGLVG 238
Query: 155 KPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSR-QYPIAIMNFIVPTRACD 213
KP R+ Y ++N R + V V + Y+ R +YP+ ++ VP D
Sbjct: 239 KPE--CSRSAASHVYTYINGRFIRDKVVQHAVLQAYRNFMERGRYPVVVLFISVPAAEVD 296
Query: 214 VNVTPDKRKVFFSDECSILHALREGLQEI 242
VNV P K +V F ++ + A++E ++ +
Sbjct: 297 VNVHPTKHEVRFREQGRVHDAIQEAVESV 325
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 43/62 (69%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ + + + ++I AG+V++ +S VKELVEN+LDAG + + + ++ G+ +V D GCG
Sbjct: 5 IKILPEQLTNKIAAGEVVERPASVVKELVENALDAGCSEVMVEIEAGGKRLIRVSDTGCG 64
Query: 72 IS 73
++
Sbjct: 65 MT 66
>gi|238927478|ref|ZP_04659238.1| DNA mismatch repair protein MutL [Selenomonas flueggei ATCC 43531]
gi|238884760|gb|EEQ48398.1| DNA mismatch repair protein MutL [Selenomonas flueggei ATCC 43531]
Length = 622
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 94/193 (48%), Gaps = 25/193 (12%)
Query: 616 RMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQST--VLNQQPLLRPLKLDLT 673
RM IGQ +L +II + L+I+DQHAA E+ F+R S T + +QQ L+ + L
Sbjct: 432 RMLPIGQVDLTYIIAQSTATLYIIDQHAAHERILFDRFSAQTDGIPSQQMLVHAI-LSFD 490
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLR-FRLKAVPFSKKITFGVEDVKDLISTLA 732
E + ++ + GF LE AG R +RL P +++++++L
Sbjct: 491 AHEAQYIEENAELFDRLGFHLEA-----AGERTYRLTETPADVPTEEAEGIIREILASLG 545
Query: 733 DNQGECSIISSYKMDTADSVCPSRVR-AMLASRACRSSIMIGDALGRNEMQKILEHLADL 791
D + P+ +R A +A+ ACR++I G+ L +M+ +L L
Sbjct: 546 DLH---------------TATPANLREAGIATMACRAAIKAGEELSIRQMEILLAELRAT 590
Query: 792 NSPWNCPHGRPTM 804
P+ CPHGRPT+
Sbjct: 591 PFPFTCPHGRPTI 603
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 54/93 (58%), Gaps = 2/93 (2%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I ++ +++I AG+V++ +S VKELVEN++DAGAT++E+ + G + +V DNG G
Sbjct: 4 IHVLDDATINKIAAGEVVERPASVVKELVENAMDAGATAVEVEIMGGGTSFIRVTDNGRG 63
Query: 72 ISPNNFKVRAVFLCQAYALIAKGVRFVCTNTTG 104
++ + RA L A + IA T G
Sbjct: 64 MTGED--ARAAILRHATSKIAAASDLETIATLG 94
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 67/136 (49%), Gaps = 4/136 (2%)
Query: 106 NVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDS-CKVEGFLSKPGQGSGRNL 164
N + + T G L I +++G + + L P+ + ++ G++SKP R+
Sbjct: 191 NNNRMTIMTAGDGDLARTIGSIYGGDAASALIPLDFYDDAADIRITGYISKPSLI--RSS 248
Query: 165 GDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQ-YPIAIMNFIVPTRACDVNVTPDKRKV 223
Q + VN R + ++K ++ +Y+ + +P+A++ VP R DVNV P K ++
Sbjct: 249 RAWQTYIVNGRTIQNRAIAKAIDNVYRSLVPKMGFPLAVIVITVPQRTIDVNVHPQKTEM 308
Query: 224 FFSDECSILHALREGL 239
F DE I A+ + +
Sbjct: 309 KFEDEGRIFKAVYKAV 324
>gi|389575733|ref|ZP_10165761.1| DNA mismatch repair protein MutL [Eubacterium cellulosolvens 6]
gi|389311218|gb|EIM56151.1| DNA mismatch repair protein MutL [Eubacterium cellulosolvens 6]
Length = 772
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 94/191 (49%), Gaps = 22/191 (11%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQS---TVLNQQPLLRPLKLDLT 673
++IGQ + + + L+I+DQHAA EK N+ER+ ++ ++ Q L + LDL+
Sbjct: 585 FRLIGQVFDTYWMIEYKDSLYIIDQHAAHEKVNYERMMKAYREKTIHSQMLYPSIVLDLS 644
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
E + ++ GF +E + G F++ AVP + + V + + LA+
Sbjct: 645 RREAQLLESNLKTFEDLGFEVE----SFGGNSFKINAVPAN---LYSVASDELFMQILAE 697
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNS 793
+++ V P + LAS +C++++ + L E +++ L L +
Sbjct: 698 ------------LESLGEVSPKLIPEKLASMSCKAAVKGNNRLSVEEANALIDELLTLEN 745
Query: 794 PWNCPHGRPTM 804
P+NCPHGRPT+
Sbjct: 746 PYNCPHGRPTI 756
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 57/94 (60%), Gaps = 2/94 (2%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
+I ++K + +I AG+V++ +S +KEL EN++DAGAT++ I +++ G + ++ DNG
Sbjct: 3 SIELLDKQTIDQIAAGEVVERPASVIKELTENAIDAGATAVTIEIRDGGTTFMRITDNGA 62
Query: 71 GISPNNFKVRAVFLCQAYALIAKGVRFVCTNTTG 104
GI + +V+ FL A + I K V + G
Sbjct: 63 GIPAD--QVKKAFLRHATSKIRKAEDLVNIASLG 94
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 62/126 (49%), Gaps = 6/126 (4%)
Query: 112 LKTQGSSSLKDNIITVFGMNIYNCLEPVAI-CKSDSCKVEGFLSKPGQGSGRNLGDRQYF 170
L T G+ +LK+ + +FG ++ E VA+ +++ V GF+ P G + +
Sbjct: 197 LYTSGNGNLKEIVYQIFGRDL--TRELVAVDARTELMHVHGFIGNPNVARGNRTFEN--Y 252
Query: 171 FVNDRPVDLPKVSKLVNELYKG-ANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDEC 229
F+N R V ++K + + Y G +YP ++ + + DVNV P K +V SD+
Sbjct: 253 FINGRYVKNKVIAKAIEDAYHGFLMQHKYPFTLLYLDIVSEKVDVNVHPQKLEVRISDQE 312
Query: 230 SILHAL 235
+ H L
Sbjct: 313 GVYHQL 318
>gi|313127387|ref|YP_004037657.1| DNA mismatch repair protein mutl [Halogeometricum borinquense DSM
11551]
gi|448288139|ref|ZP_21479340.1| DNA mismatch repair protein mutl [Halogeometricum borinquense DSM
11551]
gi|312293752|gb|ADQ68212.1| DNA mismatch repair protein MutL [Halogeometricum borinquense DSM
11551]
gi|445570178|gb|ELY24744.1| DNA mismatch repair protein mutl [Halogeometricum borinquense DSM
11551]
Length = 787
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 114/260 (43%), Gaps = 34/260 (13%)
Query: 556 QQRLSIMQSSCHTSGSVKMRRCFAAATLELSQPENEERKARALAAATTEL-----ERLFR 610
Q LS + H S V R A+T E + P R L A T + E
Sbjct: 526 QASLSGVSDEDHDSAEVTAGRSETASTAETTAP-------RRLGAPTVQRDLGGDEATLS 578
Query: 611 KE--DFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTV--LNQQPLLR 666
E M+V+GQ +I+ + + ++DQHAADE+ N+ERL + + Q L
Sbjct: 579 PEFDTLPSMRVLGQLLDTYIVAETADGMVLIDQHAADERVNYERLQRELAGDVTTQALAD 638
Query: 667 PLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHA-LAGLR-FRLKAVPFSKKITFGVEDV 724
P++++LT E + + D + + GF HA G R +++VP E +
Sbjct: 639 PVEMELTAREAALFEEYQDALAQTGF------HAGRTGERTVEVRSVPAVFAEALRPELL 692
Query: 725 KDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKI 784
+D ++ ++GE +T D+V +LA AC S+ +L + +
Sbjct: 693 RDALTAFV-SEGEDG-----GRETVDAVADE----LLADLACYPSVTGNTSLTEGSVLDL 742
Query: 785 LEHLADLNSPWNCPHGRPTM 804
L L D +P+ CPHGRP +
Sbjct: 743 LSALDDCENPYACPHGRPVV 762
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 48/75 (64%)
Query: 5 TPTNSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQ 64
T + PTIR ++ ++RI AG+V++ +S VKELVENSLDA A I +A+ G E +
Sbjct: 2 TDDDRPTIRALDDQTINRIAAGEVVERPASVVKELVENSLDADANRISVAVDSGGTEGVR 61
Query: 65 VVDNGCGISPNNFKV 79
V D+G G+ + ++
Sbjct: 62 VRDDGVGMDREDLQM 76
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 63/133 (47%), Gaps = 5/133 (3%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDS--CKVEGFLSKPGQGSGRNLGDRQ 168
V T+G SL+ +++V+G + + V D V G +S P + R+ D
Sbjct: 213 VFATEGRGSLESTVLSVYGREVAESMTRVEHEPDDGPVASVTGLVSHPE--TTRSARDYL 270
Query: 169 YFFVNDRPVDLPKVSKLVNELYKGA-NSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSD 227
FVNDR V + + V + Y G + +YP A++ VP DVNV P K +V F D
Sbjct: 271 STFVNDRYVTARVLREAVLDAYGGQLATDRYPFAVLFVDVPPNTVDVNVHPRKMEVRFDD 330
Query: 228 ECSILHALREGLQ 240
E + A+ ++
Sbjct: 331 ESGVKSAVESAVE 343
>gi|219124294|ref|XP_002182442.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406403|gb|EEC46343.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 337
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 87/164 (53%), Gaps = 13/164 (7%)
Query: 84 LCQAYALIAKGVRFVCTNT--TGKNVKSVVLKT-QGSSSLKDNIITVFGMNIYNCLEPVA 140
+ + YA+ + GV F + G+ +S++L T Q SSS+++ + G + L P+
Sbjct: 181 MLEGYAIFSPGVGFRLMDMMDAGRGGESLLLATPQNSSSIEETVSATLGPKVLPFLCPIQ 240
Query: 141 ICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQYPI 200
+ + L P Q S RN QYF +N RPV+L +VS+++NE ++ ++ P
Sbjct: 241 V------DLSTVLEAPTQ-SPRN---SQYFAINGRPVELKQVSRVLNEAWRALGCKKRPF 290
Query: 201 AIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYS 244
+ F +P D+N++PDKR V + E I +R+ + E+++
Sbjct: 291 CALQFTLPNNEYDINLSPDKRTVMLTHEPQICALVRDAVVELWA 334
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 43/64 (67%)
Query: 9 SPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDN 68
S IRPI+ V RI AGQ + DLS+A+KELV+N+LDA + +I I L G + +V D+
Sbjct: 2 SAEIRPIDPESVQRIVAGQAVFDLSTALKELVDNALDAKSRTINIRLFNLGIDILEVSDD 61
Query: 69 GCGI 72
G G+
Sbjct: 62 GMGV 65
>gi|219851577|ref|YP_002466009.1| DNA mismatch repair protein [Methanosphaerula palustris E1-9c]
gi|219545836|gb|ACL16286.1| DNA mismatch repair protein MutL [Methanosphaerula palustris E1-9c]
Length = 603
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 94/191 (49%), Gaps = 23/191 (12%)
Query: 617 MKVIGQFNLGFIIGKL-DQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPE 675
M+V+GQ ++I + DQ L ++DQHAA E+ ++++ ++ + Q L+ P+ L +T +
Sbjct: 418 MRVLGQVANTYLIAETPDQTLCLIDQHAAHERILYDQIRRNRTVQTQELITPVLLTVTLQ 477
Query: 676 EEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFG-VEDVKDLISTLADN 734
E I + GF +EE F + AVP + FG +ED + + +A
Sbjct: 478 EAEAIREATPIFEREGFRIEE----FGRDSFAVSAVP----VIFGRIEDPEQVREIIAGV 529
Query: 735 QGECSIISSYKMDTADSVCPSRVRAMLASR-ACRSSIMIGDALGRNEMQKILEHLADLNS 793
GE + D R + SR ACR ++ G AL + +++L LA
Sbjct: 530 IGE---------EPGDQTA---TRNAITSRVACRGAVKAGAALTNEQGEQLLAQLAATED 577
Query: 794 PWNCPHGRPTM 804
P+ CPHGRPT+
Sbjct: 578 PFTCPHGRPTV 588
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 69/145 (47%), Gaps = 17/145 (11%)
Query: 112 LKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFF 171
+ TQ SS+ +D I+ ++G + L PV+ ++EGF+S P R + +
Sbjct: 201 ITTQRSSNKRDTIVGLYGPELARGLIPVS-ASDGPVQIEGFISPPA--ISRLEPYQVHLS 257
Query: 172 VNDRPVDLPKVSKLVNELYKGANS----RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSD 227
+N R + L+N + +G + +YP+A ++ + T DVNV P KR+V
Sbjct: 258 INRRDI---YNRALLNAIREGYGTLLPKDRYPVAFLDLTIDTTLVDVNVHPAKRQVRLDQ 314
Query: 228 ECSILHA----LREGLQE---IYSP 245
E ++ A +R L E +Y P
Sbjct: 315 EQTVTAAVTAMIRAALDEADLLYRP 339
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 43/64 (67%), Gaps = 2/64 (3%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIAL-KEYGE-EWFQVVDNG 69
IR +++ +++I AG+VI+ +S KEL+EN++DAGA I + E GE ++VDNG
Sbjct: 6 IRQLDQATINQIAAGEVIERPASVAKELIENAIDAGADQIRCEVTTENGEITRIRIVDNG 65
Query: 70 CGIS 73
G+S
Sbjct: 66 RGMS 69
>gi|389847473|ref|YP_006349712.1| DNA mismatch repair protein MutL [Haloferax mediterranei ATCC
33500]
gi|448617251|ref|ZP_21665906.1| DNA mismatch repair protein MutL [Haloferax mediterranei ATCC
33500]
gi|388244779|gb|AFK19725.1| DNA mismatch repair protein MutL [Haloferax mediterranei ATCC
33500]
gi|445748600|gb|EMA00047.1| DNA mismatch repair protein MutL [Haloferax mediterranei ATCC
33500]
Length = 550
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 93/194 (47%), Gaps = 24/194 (12%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLS---QSTVLNQQPLLRPLKL 670
F ++VIG+F +++ + D DL +VDQHAA E+ N+ERL ++ ++ + P +
Sbjct: 358 FDEIRVIGRFRELYLLCEADDDLLVVDQHAAHERINYERLREAVETAGIDSVAVDPPATV 417
Query: 671 DLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIST 730
L+ + + + ++ GF + E +R+ AVP F + + D+++
Sbjct: 418 SLSSTDVALLEANRGVVEALGFRIAE----FGDGTYRVGAVPAPLGRPFSPDALTDVVAD 473
Query: 731 LADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLAD 790
+A G+ S D D +L AC SI GD L + +++E L
Sbjct: 474 VA--AGDVS-------DPRDE--------LLKDLACHPSIKAGDDLTDEDATRLVERLGS 516
Query: 791 LNSPWNCPHGRPTM 804
+P+ CPHGRPT+
Sbjct: 517 CETPYACPHGRPTV 530
Score = 48.5 bits (114), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 39/58 (67%)
Query: 22 RICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFKV 79
+I AG+V +S V ELVEN+LDAGA ++EI + G + +V D+G G+S ++ ++
Sbjct: 12 KIAAGEVATRPASVVVELVENALDAGAGTVEIEVGGDGTDRIRVADDGHGMSESDAEL 69
>gi|333923598|ref|YP_004497178.1| DNA mismatch repair protein mutL [Desulfotomaculum carboxydivorans
CO-1-SRB]
gi|333749159|gb|AEF94266.1| DNA mismatch repair protein mutL [Desulfotomaculum carboxydivorans
CO-1-SRB]
Length = 627
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 96/197 (48%), Gaps = 23/197 (11%)
Query: 612 EDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFER----LSQSTVLNQQPLLRP 667
E F + +GQ +++ + L+I+DQHAA E+ +E+ L Q + Q LL P
Sbjct: 436 EVFPNLSPVGQVLPTYVLAQGTSGLYIIDQHAAHERVLYEKYLHQLQQG--VQSQVLLNP 493
Query: 668 LKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDL 727
L L L+ E + H+ + GF LE G F L+ VP + +E DL
Sbjct: 494 LTLQLSHHEAQLIIEHILEFSEFGFILEH----FGGDTFLLRGVP-PQAGNKPIEIFMDL 548
Query: 728 ISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEH 787
++ L DN + ++D S+ + A++A CR +I G LG E+ +L+
Sbjct: 549 LTRLQDN-------PANRLD--RSLIIDHLAAVMA---CRDAIKAGQRLGPTEIMALLDG 596
Query: 788 LADLNSPWNCPHGRPTM 804
LA+ P+ CPHGRPT+
Sbjct: 597 LAECQRPFTCPHGRPTI 613
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 44/62 (70%)
Query: 15 INKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISP 74
+++ ++I AG+V++ S VKELVENSLDAGAT I + L + G +VVDNGCG+SP
Sbjct: 7 LDETTANQIAAGEVVERPVSVVKELVENSLDAGATRIIVELTQGGLSGIKVVDNGCGMSP 66
Query: 75 NN 76
+
Sbjct: 67 ED 68
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 75/169 (44%), Gaps = 22/169 (13%)
Query: 110 VVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQY 169
VV + G+ SL+D VFG + + V C ++G +SKP RQY
Sbjct: 195 VVFFSPGNGSLRDTAAAVFGADNVRSMIEVNYQGRLFC-IKGLISKPV----LTRASRQY 249
Query: 170 --FFVNDRPVDLPKVSKLVNELYKGA-NSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFS 226
FF+N R + +S ++ + Y+ S ++PIA+++ + DVNV P K +V +
Sbjct: 250 QSFFINGRYIRSGLISSVLQQAYQTQIPSGRFPIAVLHISLDPTQVDVNVHPTKMEVRLA 309
Query: 227 DECSI----LHALRE---------GLQEIYSPNNASYSVNKVEQLIEPE 262
E + L AL E GL EI P S K+ + P+
Sbjct: 310 QEKEVAEELLAALSEPLNLPPAITGLWEIM-PGRQHQSAKKITPVASPQ 357
>gi|291534087|emb|CBL07200.1| DNA mismatch repair enzyme (predicted ATPase) [Megamonas
hypermegale ART12/1]
Length = 495
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 99/189 (52%), Gaps = 24/189 (12%)
Query: 620 IGQFNLGFIIGK-LDQDLFIVDQHAADEKYNFERLS-QSTVLNQQPLLRPLKLDLTPEEE 677
IGQ + FI+ + + ++I+DQHAA E+ +++ + Q+ + QPLL L LD+ E
Sbjct: 311 IGQIDDCFIVAQGPNGGMYIIDQHAAHERILYDKFAKQTERIPVQPLLMHLFLDVNNSEL 370
Query: 678 VVASMHMDIIRKNGFSLEEDPHALAGL-RFRLKAVPFSKKITFGVEDVKDLISTLADNQG 736
+ + I+ GF++E LAG + RLK VP K ++ +D+ +
Sbjct: 371 TLIEENQQILYDLGFNVE-----LAGQNQIRLKEVPADIK----PQESEDIFREI----- 416
Query: 737 ECSIISSYKMDTADSVCPSRVR-AMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPW 795
+IS ++ T P +R + LA AC+++I GD L +M+ IL LA P+
Sbjct: 417 ---LISLSQLHTP---TPQEIRHSCLAMTACKAAIKAGDVLNITQMKIILNELAQTTLPY 470
Query: 796 NCPHGRPTM 804
CPHGRPT+
Sbjct: 471 TCPHGRPTI 479
Score = 69.3 bits (168), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 79/166 (47%), Gaps = 8/166 (4%)
Query: 106 NVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLG 165
N + + T G+ SL D I ++G + L P+ +D KV GF+SKP R+
Sbjct: 39 NNNKIAITTPGNGSLYDAIECIYGTKVSEELLPIEAI-TDDIKVTGFISKPA--IIRSSR 95
Query: 166 DRQYFFVNDRPVDLPKVSKLVNELYKGANSRQ-YPIAIMNFIVPTRACDVNVTPDKRKVF 224
Q F +N R V+ +SK ++ Y + YP I+N V R D+NV P K ++
Sbjct: 96 SWQTFVINGRVVNSRIISKAIDNAYHSLLPKSGYPFVILNIEVNKRTIDINVHPQKAEIK 155
Query: 225 FSDECSILHALREGLQEIYSPNN----ASYSVNKVEQLIEPEKSGP 266
F DE + + + E PN+ + +++ ++ + EK+ P
Sbjct: 156 FEDESLLFKTIYHAVLEAVKPNDNQALSDFAIPVTDKALHIEKTVP 201
>gi|39997099|ref|NP_953050.1| DNA mismatch repair protein [Geobacter sulfurreducens PCA]
gi|409912524|ref|YP_006890989.1| DNA mismatch repair protein MutL [Geobacter sulfurreducens KN400]
gi|81832022|sp|Q74BP0.1|MUTL_GEOSL RecName: Full=DNA mismatch repair protein MutL
gi|39983989|gb|AAR35377.1| DNA mismatch repair protein MutL [Geobacter sulfurreducens PCA]
gi|298506112|gb|ADI84835.1| DNA mismatch repair protein MutL [Geobacter sulfurreducens KN400]
Length = 606
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 94/197 (47%), Gaps = 20/197 (10%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQ---QPLLRPLKL 670
F + VIGQ+N +I+ + DL I+DQHAA E+ FERL + Q LL P +
Sbjct: 415 FSSLAVIGQYNASYILCQDGSDLVIIDQHAAHERVAFERLKTQFAAGRVEGQGLLFPETV 474
Query: 671 DLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIST 730
+L+ E V H + + GF LE+ G + +K +P ++ G + ++ L T
Sbjct: 475 ELSHRESAVVREHGGELGRLGFDLED----FGGTTWIVKGIP---RLLAGTDYLRLLRDT 527
Query: 731 LADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLAD 790
L + Q S+ +S + A V +L AC S + L E++ + H+
Sbjct: 528 LEELQ---SLGASRSIADA-------VEDILTRVACHSVVRGEHPLTTGEIEALFAHMDA 577
Query: 791 LNSPWNCPHGRPTMRHL 807
+ NCPHGRP ++ L
Sbjct: 578 TDFSTNCPHGRPVLQRL 594
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 42/62 (67%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR + + + ++I AG+V++ +S VKELVEN+LDAG I + ++ G ++ D+GCG
Sbjct: 5 IRILPEILTNKIAAGEVVERPASVVKELVENALDAGCGEIIVEIEGGGRRLIRITDDGCG 64
Query: 72 IS 73
+S
Sbjct: 65 MS 66
Score = 49.3 bits (116), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 71/159 (44%), Gaps = 11/159 (6%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICK 143
L AL VRF C + GK + + +L D + + G + + L PV +
Sbjct: 175 LVTRLALSRPEVRFTCV-SDGKTLFRAL-----DGTLLDRVAALLGKTVASALHPVDLA- 227
Query: 144 SDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSR-QYPIAI 202
++ +V G +++P R+ Y ++N R + V + + Y+ R +YP+ +
Sbjct: 228 TEGVRVTGLVARPD--VSRSAASHLYTYINGRFIRDRVVQHAILQAYRNFLERGRYPVVV 285
Query: 203 MNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQE 241
+ V DVNV P K +V F + I+H + +G E
Sbjct: 286 LFIEVSPGEVDVNVHPTKHEVRFRQQ-GIVHDVIQGAVE 323
>gi|448579511|ref|ZP_21644636.1| DNA mismatch repair protein MutL [Haloferax larsenii JCM 13917]
gi|445723217|gb|ELZ74862.1| DNA mismatch repair protein MutL [Haloferax larsenii JCM 13917]
Length = 786
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 97/213 (45%), Gaps = 22/213 (10%)
Query: 596 RALAAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQ 655
R L+ LE F E M+++GQ +I+ + + L +VDQHAADE+ N+ERL
Sbjct: 566 RDLSGEEATLEPEF--ESLPSMRILGQLMDTYIVAETSEGLVLVDQHAADERVNYERLKA 623
Query: 656 STVLN--QQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHA-LAGLR-FRLKAV 711
+ Q L P++L+LT E + + + + + GF HA G R ++ V
Sbjct: 624 EVEGDTPTQALADPVELELTAREAALFEEYREAVAQVGF------HAGRTGERTVTVRTV 677
Query: 712 PFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIM 771
P E V+D ++ ++ E T D+V +LA AC SI
Sbjct: 678 PAVFDAALDPELVRDALTAFVQDESEGG------QQTVDAVADE----LLADLACYPSIT 727
Query: 772 IGDALGRNEMQKILEHLADLNSPWNCPHGRPTM 804
+L + +L L D +P+ CPHGRP +
Sbjct: 728 GNTSLREGSVLDLLSALDDCENPYACPHGRPVI 760
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 65/132 (49%), Gaps = 4/132 (3%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYF 170
V T+G L +++V+G + + PV D V G +S P + R+ D
Sbjct: 227 VFATEGRGDLASTVLSVYGREVAEAMVPVEYDSGD-VSVSGLVSHPE--TTRSTRDYLST 283
Query: 171 FVNDRPVDLPKVSKLVNELYKGA-NSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDEC 229
FVNDR V + + V + Y G ++ +YP A++ V A DVNV P K +V F DE
Sbjct: 284 FVNDRYVTARVLREAVLDAYGGQLDADRYPFAVLFVDVAPDAVDVNVHPRKMEVRFDDET 343
Query: 230 SILHALREGLQE 241
+ A+ + ++E
Sbjct: 344 QVRQAVTDAVEE 355
Score = 57.0 bits (136), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 44/65 (67%)
Query: 15 INKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISP 74
+++ + RI AG+V++ +S VKELVENSLDA AT + +A+ G E ++ D+G G++
Sbjct: 7 LDEKTIQRIAAGEVVERPASVVKELVENSLDADATRVSVAVDSGGVEGVRIRDDGVGMTE 66
Query: 75 NNFKV 79
+ ++
Sbjct: 67 DELEL 71
>gi|420145753|ref|ZP_14653207.1| DNA mismatch repair protein mutL [Lactobacillus coryniformis subsp.
coryniformis CECT 5711]
gi|398402602|gb|EJN55923.1| DNA mismatch repair protein mutL [Lactobacillus coryniformis subsp.
coryniformis CECT 5711]
Length = 645
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 104/214 (48%), Gaps = 23/214 (10%)
Query: 612 EDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQ---STVLNQQPLLRPL 668
E F + IGQ + +++ + + +IVDQHAA E+ N+E Q + +QQ LL PL
Sbjct: 441 ERFPHLDYIGQMHGTYLLAQGEDGFYIVDQHAAQERVNYEYYRQEIGTVSTDQQSLLVPL 500
Query: 669 KLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLI 728
LD + + H D++++ G +LE A F +++ P K + ++++I
Sbjct: 501 VLDYPASDAIRLRDHADLLQQLGLNLE----AFGQNSFVVRSHPTWFKAGQEEDTIREMI 556
Query: 729 STLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHL 788
+ ++Q ++ ++ TA + +C+ +I L + + +L+ L
Sbjct: 557 DYILNDQKIT--VAKFREQTAIMM------------SCKRAIKANHHLDDQQAKALLQRL 602
Query: 789 ADLNSPWNCPHGRPTMRHLV--DLTTIRKNIDEN 820
+ +P+NCPHGRP + H DL + + I E+
Sbjct: 603 PECENPFNCPHGRPVLVHFSGKDLEKMFRRIQES 636
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 62/116 (53%), Gaps = 20/116 (17%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I + + + ++I AG+VI+ +S VKELVEN+LDA +T I+I + E G + QV+DNG G
Sbjct: 4 IHELAEVLANQIAAGEVIERPASVVKELVENALDAHSTQIDIVVAEAGLKQIQVIDNGDG 63
Query: 72 ISPNN-------------------FKVRAV-FLCQAYALIAKGVRFVCTNTTGKNV 107
I+ + FKVR++ F +A IA + +TG+ V
Sbjct: 64 IAAEDVLNAFKRHATSKIHDRADLFKVRSLGFRGEALPSIASVSDMILETSTGEEV 119
>gi|108742137|gb|AAI17598.1| Unknown (protein for IMAGE:7223102) [Danio rerio]
Length = 651
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 94/203 (46%), Gaps = 21/203 (10%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGM-NIYNCLEP 138
R L AYA+I +R ++ K+VV + S + ++ V G ++ N L
Sbjct: 171 RVQNLLMAYAVIKPELRVTLSHN-----KAVVWQKSRVSDHRTALMAVLGAASVANMLPV 225
Query: 139 VAICKSDSCKVEGFLSKPGQG---SGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANS 195
+ +EGF KPG + + D+ + FVN RPV ++ KL+ + Y A S
Sbjct: 226 QHHQEQPEITIEGFFPKPGSDLNSTSSSTTDKSFIFVNSRPVHHKEILKLIKQYYTSAQS 285
Query: 196 ------RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNAS 249
R+YP +MN +P DVN+TPDK +V ++ +L ++ L +Y +N
Sbjct: 286 NSESVSRRYPTFMMNITIPASTVDVNLTPDKTEVMLQNKDEVLLSVETMLISLYGYSNGE 345
Query: 250 YSVNK------VEQLIEPEKSGP 266
++ V L EPE++ P
Sbjct: 346 ENLKTAGNHPDVTSLNEPERTSP 368
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 43/64 (67%)
Query: 19 VVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFK 78
V +C+ QVI + + VKEL+ENSLDAG++S+E+ L+ YG + +V DNG GI +
Sbjct: 8 TVRLLCSSQVITSVLNVVKELIENSLDAGSSSLEVKLENYGLDRIEVRDNGSGIKDTDVS 67
Query: 79 VRAV 82
V AV
Sbjct: 68 VMAV 71
>gi|94970246|ref|YP_592294.1| DNA mismatch repair protein MutL [Candidatus Koribacter versatilis
Ellin345]
gi|123256270|sp|Q1ILN0.1|MUTL_KORVE RecName: Full=DNA mismatch repair protein MutL
gi|94552296|gb|ABF42220.1| DNA mismatch repair protein MutL [Candidatus Koribacter versatilis
Ellin345]
Length = 647
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 100/192 (52%), Gaps = 22/192 (11%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERL----SQSTVLNQQPLLRPLKLDL 672
++ +GQ FI+ ++ L+I+DQH A E+ FE++ + ++V QQ LL PL ++L
Sbjct: 459 LRPLGQIRESFILATSNEGLWIIDQHVAHERVLFEKVLKQRAAASVETQQ-LLMPLIVEL 517
Query: 673 TPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLA 732
TP ++ V + + + +NGF +E F +KA P + ED++ +S +
Sbjct: 518 TPGQQAVFTEIAEELHQNGFEVE----PFGSRTFAVKAAPAGIR----AEDIEKTLSEVL 569
Query: 733 DNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLN 792
D+ ++ ++ A S R+ A +A C ++I + L +++M+ +L LA
Sbjct: 570 DSFEREQ--QAFNLEHAQS----RIAATIA---CHAAIKVNMPLTQDKMEWLLAELAKTE 620
Query: 793 SPWNCPHGRPTM 804
P CPHGRP +
Sbjct: 621 HPMTCPHGRPIV 632
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 43/61 (70%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I +++ V ++I AG+V++ +S VKEL+ENSLDAGA I + ++ G++ +VD+G G
Sbjct: 4 IHVLSEHVANKIAAGEVVERPASVVKELIENSLDAGAKRIRVHVEAGGKKLIHIVDDGIG 63
Query: 72 I 72
+
Sbjct: 64 M 64
>gi|448503569|ref|ZP_21613198.1| DNA mismatch repair protein MutL [Halorubrum coriense DSM 10284]
gi|445691770|gb|ELZ43953.1| DNA mismatch repair protein MutL [Halorubrum coriense DSM 10284]
Length = 765
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 594 KARALAAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERL 653
+ R L +TE ER F + ++V+GQ + +++ + L ++DQHAADE+ N+ERL
Sbjct: 545 RQRTLDGESTESEREF--DSLPSLRVLGQLHETYVVAESSDGLALIDQHAADERVNYERL 602
Query: 654 SQ--STVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAV 711
+ + Q L P++++LT E + +D + GF E AG R
Sbjct: 603 KAVFADGADAQALAEPVRIELTAREAALFEEFVDDLAAIGFRAER-----AGDRAVAVTA 657
Query: 712 PFSK-KITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSI 770
+ + ++D++S L D+ D V +LA AC S+
Sbjct: 658 VPAVFDAALDPDLLRDVLSALVDDAA-----------AGDEPVADVVDELLADLACYPSV 706
Query: 771 MIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHL 807
+L + +LE L D +P+ CPHGRP + L
Sbjct: 707 TGNTSLTEGRVVDLLERLDDCENPYACPHGRPVIIRL 743
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 47/70 (67%)
Query: 10 PTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNG 69
P I +++ V RI AG+V++ +S VKELVENSLDAGA+ + ++++ G E +V D+G
Sbjct: 4 PDIERLDERTVQRIAAGEVVERPASVVKELVENSLDAGASRVAVSVEAGGTEGIRVRDDG 63
Query: 70 CGISPNNFKV 79
GIS + +
Sbjct: 64 VGISGDQLEA 73
Score = 46.6 bits (109), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 62/146 (42%), Gaps = 20/146 (13%)
Query: 112 LKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSC-------------KVEGFLSKPGQ 158
T+G+ L+ ++ V+G + + VA + +V G +S P
Sbjct: 200 FATEGNGDLRSAVLAVYGREVAESMIDVAWSPDGAGADDDPGDDGAPVRRVTGLVSHPET 259
Query: 159 GSGRNLGDRQYF--FVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACDVN 215
R+Y +VN R V + + E Y G + +YP A++ VP DVN
Sbjct: 260 ----TRSTREYLSTYVNGRYVTASALREATLEAYGGQLAPDRYPFAVLFVEVPAGDVDVN 315
Query: 216 VTPDKRKVFFSDECSILHALREGLQE 241
V P K +V F +E ++ A+ ++E
Sbjct: 316 VHPRKLEVRFDEEPAVRAAVESAVEE 341
>gi|292669798|ref|ZP_06603224.1| DNA mismatch repair protein MutL [Selenomonas noxia ATCC 43541]
gi|292648595|gb|EFF66567.1| DNA mismatch repair protein MutL [Selenomonas noxia ATCC 43541]
Length = 620
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 95/194 (48%), Gaps = 25/194 (12%)
Query: 615 GRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQST--VLNQQPLLRPLKLDL 672
G + IGQ +L +II + Q L+I+DQHAA E+ F+R S + +QQ L+ + L
Sbjct: 429 GSLLPIGQVDLTYIIAQSAQTLYIIDQHAAHERILFDRFSAHADGIPSQQMLVHAI-LSF 487
Query: 673 TPEEEVVASMHMDIIRKNGFSLEEDPHALAGLR-FRLKAVPFSKKITFGVEDVKDLISTL 731
E + ++ + GF LE AG R +RL P + +++++ +L
Sbjct: 488 DAHEAQYIEENAELFDRLGFHLEP-----AGEREYRLTEAPADIPLDEAEATIREILISL 542
Query: 732 ADNQGECSIISSYKMDTADSVCPSRVR-AMLASRACRSSIMIGDALGRNEMQKILEHLAD 790
D + P+ +R A +A+ ACR++I G+ L +M+ +L+ L
Sbjct: 543 GDLH---------------AATPAHLRQAGIATMACRAAIKAGEELSIRQMEILLDELRA 587
Query: 791 LNSPWNCPHGRPTM 804
P+ CPHGRPT+
Sbjct: 588 TPFPFTCPHGRPTI 601
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 68/132 (51%), Gaps = 4/132 (3%)
Query: 106 NVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDS-CKVEGFLSKPGQGSGRNL 164
N + L T G SL+ I +++G + L P+ +++ ++ G++SKP R+
Sbjct: 191 NNNRLTLMTAGDGSLRHAIESIYGGDAAAALIPLDFHDAEADIRITGYISKPSMI--RSS 248
Query: 165 GDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQ-YPIAIMNFIVPTRACDVNVTPDKRKV 223
Q + VN R + ++K ++ +Y+ + +P+A++ VP R DVNV P K ++
Sbjct: 249 RAWQTYIVNGRTIQNRAIAKAIDNVYRALVPKMGFPLAVLCIEVPQRTIDVNVHPQKTEL 308
Query: 224 FFSDECSILHAL 235
F DE I A+
Sbjct: 309 KFEDEGRIFKAV 320
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 43/62 (69%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I ++ +++I AG+V++ +S VKELVEN++DAGA ++E+ + G + +V DNG G
Sbjct: 4 IHVLDDTTINKIAAGEVVERPASVVKELVENAIDAGAAAVEVEIMGGGTSFIRVTDNGHG 63
Query: 72 IS 73
++
Sbjct: 64 MA 65
>gi|452203868|ref|YP_007484001.1| DNA mismatch repair protein MutL [Dehalococcoides mccartyi DCMB5]
gi|452110927|gb|AGG06659.1| DNA mismatch repair protein MutL [Dehalococcoides mccartyi DCMB5]
Length = 566
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 97/204 (47%), Gaps = 27/204 (13%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQ--QPLLRPLKLDLTP 674
++++GQ +++ + L+I+DQHAA E+ +E ++ T + Q LL P L+L P
Sbjct: 384 LRLVGQVGGLYLLAEGPDGLYIIDQHAAHERIRYEEIAAETYSARACQSLLEPFILELNP 443
Query: 675 EEEVVASMHMDIIRKNGFSLEEDPHALAGLR-FRLKAVPFSKKITFGVEDVKDLISTLAD 733
+E + + GF +EE G R +R+K++P K K L++ LAD
Sbjct: 444 VQEAMIEKCKSELELMGFEMEE-----FGRRVYRVKSIPAGLK----AHQAKALLAELAD 494
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNS 793
N D + +R M AC +++ G L EM+++L L
Sbjct: 495 N----------PKDAPAEIKERLIRLM----ACHTAVRAGQVLTEAEMRELLLKLEKTGI 540
Query: 794 PWNCPHGRPTMRHLVDLTTIRKNI 817
P +CPHGRPT+ +D + + K+
Sbjct: 541 PGHCPHGRPTIVK-IDFSQLEKDF 563
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 45/62 (72%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ ++K + RI AG+VI+ +S VKEL+ENSLDA A ++I ++E G + +V D+GCG
Sbjct: 3 IKLLDKATIARIAAGEVIERPASVVKELLENSLDAEAKRVDIVIREGGIGYIEVSDDGCG 62
Query: 72 IS 73
I+
Sbjct: 63 IT 64
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 91/194 (46%), Gaps = 12/194 (6%)
Query: 73 SPNNFKVRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNI 132
+P + + + +YAL V+F N G+N L T G+ L+D ++ V+G +
Sbjct: 162 TPQHEASKVTEVVVSYALAYPEVKF-SLNVDGRNT----LNTPGNGKLRDAVLEVYGSDA 216
Query: 133 YNCLEPVA--ICKSDSCKVEGFLSKPGQG-SGRNLGDRQYFFVNDRPVDLPKVSKLVNEL 189
+ + + +S + + G +S P S RN +FFVN R + + + V +
Sbjct: 217 ASKMLDLENDTYRSSAINISGLVSPPEVSRSNRN---SLHFFVNRRLIQSRALQRAVEQA 273
Query: 190 YKGA-NSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNA 248
Y G + +YP+ ++N + DVN+ P K +V FSDE ++ +++ ++ +
Sbjct: 274 YSGLLTAGRYPMGVINIRLSGALVDVNIHPTKAEVKFSDESAVFTSVQRAVRSVLVEKPP 333
Query: 249 SYSVNKVEQLIEPE 262
V + + +PE
Sbjct: 334 LLHVEEARPVYQPE 347
>gi|451945686|ref|YP_007466281.1| DNA mismatch repair protein MutL [Desulfocapsa sulfexigens DSM
10523]
gi|451905034|gb|AGF76628.1| DNA mismatch repair protein MutL [Desulfocapsa sulfexigens DSM
10523]
Length = 613
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 101/202 (50%), Gaps = 21/202 (10%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTV---LNQQPLLRPLKLDLT 673
+K+IGQ++ +I + L ++DQHAA E+ FE+L + + + +Q LL P ++L+
Sbjct: 425 LKIIGQYDKLYIFCQSSDGLVVIDQHAAHERLLFEKLKKQFLKGNITRQTLLFPETIELS 484
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
+ + I K GF++ E G + + AVP L + LA
Sbjct: 485 VVDTAKVEQYGQEIDKMGFTIRE----FGGNSYVISAVP-------------ALGNHLAP 527
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNS 793
+ I+ + T + S + +LAS AC+++I GDAL E++ +L+ +A +
Sbjct: 528 AELFFDILEQFGSPTGNQRKGSLLEDVLASMACKAAIKSGDALSLKEIEALLDSMARADL 587
Query: 794 PWNCPHGRPTMRHLVDLTTIRK 815
+CPHGRP ++ + T I+K
Sbjct: 588 FSHCPHGRPVLKQFTE-TEIKK 608
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 50/74 (67%), Gaps = 5/74 (6%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR + + + +RI AG+V++ +S VKEL+ENSLDAGAT IEI +++ G +++DNG G
Sbjct: 4 IRVLPEQLANRIAAGEVVERPASVVKELIENSLDAGATRIEIEVEDGGTRLIRIIDNGEG 63
Query: 72 ISPNNFKVRAVFLC 85
+ ++ V LC
Sbjct: 64 MDEDD-----VLLC 72
>gi|375084994|ref|ZP_09731787.1| DNA mismatch repair protein MutL [Megamonas funiformis YIT 11815]
gi|374567643|gb|EHR38852.1| DNA mismatch repair protein MutL [Megamonas funiformis YIT 11815]
Length = 647
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 99/189 (52%), Gaps = 24/189 (12%)
Query: 620 IGQFNLGFIIGK-LDQDLFIVDQHAADEKYNFERLS-QSTVLNQQPLLRPLKLDLTPEEE 677
IGQ + FI+ + + ++I+DQHAA E+ +++ + Q+ + QPLL L LD+ E
Sbjct: 463 IGQIDDCFIVAQGPNGGMYIIDQHAAHERILYDKFAKQTERIPVQPLLMHLFLDVNNSEL 522
Query: 678 VVASMHMDIIRKNGFSLEEDPHALAGL-RFRLKAVPFSKKITFGVEDVKDLISTLADNQG 736
+ + I+ GF++E LAG + RLK VP K ++ +D+ +
Sbjct: 523 TLIEENQQILYDLGFNVE-----LAGQNQIRLKEVPADIK----PQESEDIFREI----- 568
Query: 737 ECSIISSYKMDTADSVCPSRVR-AMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPW 795
+IS ++ T P +R + LA AC+++I GD L +M+ IL LA P+
Sbjct: 569 ---LISLSQLHTP---TPQEIRHSCLAMTACKAAIKAGDVLNITQMKIILNELAQTTLPY 622
Query: 796 NCPHGRPTM 804
CPHGRPT+
Sbjct: 623 TCPHGRPTI 631
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 8/166 (4%)
Query: 106 NVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLG 165
N + + T G+ SL D I ++G + L P+ +D KV GF+SKP R+
Sbjct: 191 NNNKIAITTPGNGSLYDAIECIYGTKVSEELLPIEAI-TDDIKVTGFISKPA--IIRSSR 247
Query: 166 DRQYFFVNDRPVDLPKVSKLVNELYKGANSRQ-YPIAIMNFIVPTRACDVNVTPDKRKVF 224
Q F +N R V+ +SK ++ Y + YP I+N + R D+NV P K ++
Sbjct: 248 SWQTFVINGRVVNSRIISKAIDNAYHSLLPKSGYPFVILNIEINKRTIDINVHPQKAEIK 307
Query: 225 FSDECSILHALREGLQEIYSPNN----ASYSVNKVEQLIEPEKSGP 266
F DE + + + E PN+ + +++ ++ + EK+ P
Sbjct: 308 FEDESLLFKTIYHAVLEAVKPNDNQALSDFAIPVTDKALHIEKTVP 353
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 52/94 (55%), Gaps = 2/94 (2%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
+I ++ V +I AG+V++ +S +KELVENS+DA A IE+ + G + +V DNG
Sbjct: 3 SIHILDDITVDKIAAGEVVERPASVIKELVENSIDAHADKIEVEILAGGTSFMRVTDNGD 62
Query: 71 GISPNNFKVRAVFLCQAYALIAKGVRFVCTNTTG 104
G+ +N R L A + I + + +T G
Sbjct: 63 GM--DNQNARLAILRHATSKIKQVDDLMSIDTLG 94
>gi|314933476|ref|ZP_07840841.1| DNA mismatch repair protein HexB [Staphylococcus caprae C87]
gi|313653626|gb|EFS17383.1| DNA mismatch repair protein HexB [Staphylococcus caprae C87]
Length = 655
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 92/192 (47%), Gaps = 23/192 (11%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADE--KYNFERLSQSTVLNQ-QPLLRPLKLDLT 673
M+V+GQ + +II + + +F++DQHAA E KY + R V N+ Q LL PL +
Sbjct: 467 MEVVGQVHGTYIIAQNENGMFMIDQHAAQERIKYEYFRDKIGEVSNEVQNLLIPLTFHFS 526
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
+E+++ + D + K G LE G + + + P E +KD+I + D
Sbjct: 527 KDEQMIIDQYQDELDKVGVHLEH----FGGHDYIVNSYPVWFPKAEAQEIIKDMIELVLD 582
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLA-SRACRSSIMIGDALGRNEMQKILEHLADLN 792
N+ K+D ++R A +C+ SI L NEM +++ L +
Sbjct: 583 NK---------KVDV------KKIREDAAIMMSCKKSIKANHYLKNNEMSDLIDQLREAE 627
Query: 793 SPWNCPHGRPTM 804
P+ CPHGRP +
Sbjct: 628 DPFTCPHGRPII 639
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 45/68 (66%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ + + ++I AG+V++ SS VKEL+EN++DA +T I I +++ G +VVDNG G
Sbjct: 4 IKELQTSLANKIAAGEVVERPSSVVKELLENAIDANSTEINIEVEQSGIASIRVVDNGSG 63
Query: 72 ISPNNFKV 79
I ++ +
Sbjct: 64 IEQDDLSL 71
Score = 43.1 bits (100), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 63/136 (46%), Gaps = 8/136 (5%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYF 170
++ T GS + + ++GM + L V+ SD +EGF +KP +R Y
Sbjct: 195 LISTNGSGRTNEVMAEIYGMRVAKDLVHVSGDTSD-YHLEGFFAKPEHSRS----NRHYI 249
Query: 171 --FVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSD 227
F+N R + ++K + E Y + +YPI +N + DVNV P K +V S
Sbjct: 250 SIFINGRYIKNFILNKAILEGYHTLLTIGRYPICYINIEMDPILVDVNVHPTKLEVRLSK 309
Query: 228 ECSILHALREGLQEIY 243
E + + E ++E +
Sbjct: 310 EEQLYDLIVEKIREAF 325
>gi|448570137|ref|ZP_21639131.1| DNA mismatch repair protein MutL [Haloferax lucentense DSM 14919]
gi|445723438|gb|ELZ75080.1| DNA mismatch repair protein MutL [Haloferax lucentense DSM 14919]
Length = 563
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 20/204 (9%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQ---STVLNQQPLLRPLKL 670
F ++VIG+F +++ + D +L +VDQHAA E+ N+ERL + S ++ + P +
Sbjct: 367 FDDLRVIGRFRGLYLLCEADDELLVVDQHAAHERINYERLREAVESAGIDSAAVDPPATV 426
Query: 671 DLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIST 730
L+P + + + D++ K GF + E +R++AVP F +
Sbjct: 427 SLSPADAALLDANRDLVEKLGFRVVEFGEGGGTGTYRVEAVPAPLGRPF---------AP 477
Query: 731 LADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLAD 790
A + + D D +L AC SI GD L +E +++E L
Sbjct: 478 DALADVVADVAAGDDADPRDE--------LLKDLACHPSIKAGDDLTDDEAARLVERLGS 529
Query: 791 LNSPWNCPHGRPTMRHLVDLTTIR 814
+P+ CPHGRPT+ + + T +R
Sbjct: 530 CGTPYTCPHGRPTVLAIDEETFVR 553
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 36/52 (69%)
Query: 22 RICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGIS 73
+I AG+V+ +S V EL+EN+LDAGA ++EI + G + +V D+G G++
Sbjct: 12 KIAAGEVVARPASVVVELIENALDAGAETVEIDVDGDGTDRIRVADDGRGMA 63
>gi|312870472|ref|ZP_07730592.1| DNA mismatch repair protein, C-terminal domain protein
[Lactobacillus oris PB013-T2-3]
gi|311094029|gb|EFQ52353.1| DNA mismatch repair protein, C-terminal domain protein
[Lactobacillus oris PB013-T2-3]
Length = 675
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 98/211 (46%), Gaps = 23/211 (10%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQ---STVLNQQPLLRPLKL 670
F ++ IGQ F++ + L+IVDQHAA E+ N+ER Q +QQ L PL L
Sbjct: 469 FPDLQYIGQLQGTFLLAQAGDGLYIVDQHAAQERINYERYRQEIGQVSADQQTFLVPLVL 528
Query: 671 DLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIST 730
+ + + + S H D++ G LE F L++ P K + V+++I
Sbjct: 529 NYSTVDALAISNHADVLASVGLHLEH----FGQNSFLLRSHPTWFKEGQEEDTVREMIDW 584
Query: 731 LADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLAD 790
+ + G+ + + ++M TA M+ +C+ +I L E + +L L
Sbjct: 585 IIKD-GKLT-VQQFRMKTA---------IMM---SCKRAIKANHHLDDREARALLRRLPQ 630
Query: 791 LNSPWNCPHGRPTMRHL--VDLTTIRKNIDE 819
+P+NCPHGRP H DL + K I E
Sbjct: 631 CENPFNCPHGRPVTVHFNDRDLEKMFKRIQE 661
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 46/68 (67%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I +N + +I AG+VI+ +S VKELVENSLDA + ++I ++ G + +V+D+G G
Sbjct: 4 IHELNDILADQIAAGEVIERPASIVKELVENSLDAQSKRVDIIVENAGLDSIRVIDDGQG 63
Query: 72 ISPNNFKV 79
I+ ++ ++
Sbjct: 64 IAADDVEL 71
Score = 43.9 bits (102), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 71/162 (43%), Gaps = 19/162 (11%)
Query: 73 SPNNFKVRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNI 132
SP R + AL V F T+ GK + ++ G+ +L+ I T++G+
Sbjct: 163 SPQTELARITDIINRLALANPQVAFSFTHN-GKEI----FRSAGNDNLQQVIATIYGIQA 217
Query: 133 YNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYF--FVNDRPVDLPKVSKLVNELY 190
+ V +D +V GF+S P RQY +N R V + L +
Sbjct: 218 GRKMLAVQGTDND-FRVTGFVSLPELTRA----SRQYITIMINHRYV---RNYALTKAII 269
Query: 191 KGANSR----QYPIAIMNFIVPTRACDVNVTPDKRKVFFSDE 228
+G S+ +YP+A++N + DVNV P KR+V S E
Sbjct: 270 QGYESKLMVGRYPVAVINIDLDPVLVDVNVHPAKREVRLSKE 311
>gi|323703570|ref|ZP_08115215.1| DNA mismatch repair protein MutL [Desulfotomaculum nigrificans DSM
574]
gi|323531473|gb|EGB21367.1| DNA mismatch repair protein MutL [Desulfotomaculum nigrificans DSM
574]
Length = 627
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 93/197 (47%), Gaps = 23/197 (11%)
Query: 612 EDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFER----LSQSTVLNQQPLLRP 667
E F + +GQ +++ + L+I+DQHAA E+ +E+ L Q + Q LL P
Sbjct: 436 EVFPNLSPVGQVLPTYVLAQGTTGLYIIDQHAAHERVLYEKYLHQLQQG--VQSQVLLNP 493
Query: 668 LKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDL 727
L L L+ E + H+ + GF LE G F L+ VP + +E DL
Sbjct: 494 LTLQLSHHEAQLIIEHILEFSEFGFILEH----FGGDTFLLRGVP-PQAGNKPIEIFMDL 548
Query: 728 ISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEH 787
++ L DN + ++D + + A ACR +I G LG E+ +L+
Sbjct: 549 LTRLQDN-------PANRLDRGLII-----DHLAAVMACRDAIKAGQRLGPTEIMALLDG 596
Query: 788 LADLNSPWNCPHGRPTM 804
LA+ P+ CPHGRPT+
Sbjct: 597 LAECQRPFTCPHGRPTV 613
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 44/62 (70%)
Query: 15 INKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISP 74
+++ ++I AG+V++ S VKELVENSLDAGAT I + L + G +VVDNGCG+SP
Sbjct: 7 LDETTANQIAAGEVVERPVSVVKELVENSLDAGATRIIVELTQGGLSGIKVVDNGCGMSP 66
Query: 75 NN 76
+
Sbjct: 67 ED 68
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 84/193 (43%), Gaps = 23/193 (11%)
Query: 110 VVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQY 169
VV + G+ SL+D VFG + + V C ++G +SKP RQY
Sbjct: 195 VVFFSPGNGSLRDTAAAVFGADNVRSMIEVNYQGRLFC-IKGLISKPV----LTRASRQY 249
Query: 170 --FFVNDRPVDLPKVSKLVNELYKGA-NSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFS 226
FF+N R + +S ++ + Y+ S ++PIA+++ + DVNV P K +V +
Sbjct: 250 QSFFINGRYIRSGLISSVLQQAYQTQIPSGRFPIAVLHISLDPTQVDVNVHPTKMEVRLA 309
Query: 227 DECSI----LHALRE---------GLQEIYSPNNASYSVNKVEQLIEPEKSGPSSGAESC 273
E + L AL E GL EI P S K+ + P+ +E
Sbjct: 310 QEKEVAEELLAALSEPLNLPPAITGLWEIM-PGRQHQSAKKITPVASPQPEQIKDISEEK 368
Query: 274 MFLEQLSPDGNGC 286
L L+PD NG
Sbjct: 369 SELPPLAPD-NGV 380
>gi|383761602|ref|YP_005440584.1| DNA mismatch repair protein mutL [Caldilinea aerophila DSM 14535 =
NBRC 104270]
gi|381381870|dbj|BAL98686.1| DNA mismatch repair protein mutL [Caldilinea aerophila DSM 14535 =
NBRC 104270]
Length = 639
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 93/197 (47%), Gaps = 25/197 (12%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEK-----YNFERLSQSTVLNQQPLLRPLKLD 671
++V+GQ +I+ + + +F++DQHAA E+ Y +R +++ + +Q LL PL L
Sbjct: 450 LRVVGQIGATYIVAEGPEGMFLIDQHAAHERILYEQYMVQRAGENSAVAKQHLLEPLMLH 509
Query: 672 LTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTL 731
+ + + H++ +++ GF +E G F ++A P ED ++ +
Sbjct: 510 VGARLTGMVAAHLETLQRLGFEIE----PFGGDAFLVRAAP----AVLAGEDPLRVLEEI 561
Query: 732 ADNQGECSIISSYKMDTADSVCPSRVRAMLASRAC-RSSIMIGDALGRNEMQKILEHLAD 790
GE + + D + A L C R++I G L EMQ+++ L
Sbjct: 562 VAALGE-------RRNLVDE----NIEAELVKMVCKRAAIKAGQLLSDLEMQELVRQLEQ 610
Query: 791 LNSPWNCPHGRPTMRHL 807
SP CPHGRPTM L
Sbjct: 611 CQSPRTCPHGRPTMIQL 627
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 44/62 (70%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
+I+ ++ V +I AG+V++ ++ VKEL+ENSLDAGA+ I + ++E G +V DNGC
Sbjct: 2 SIQILSPEVAAKIAAGEVVERPANVVKELLENSLDAGASEIRVEVREGGRRLLRVTDNGC 61
Query: 71 GI 72
GI
Sbjct: 62 GI 63
>gi|410657247|ref|YP_006909618.1| DNA mismatch repair protein MutL [Dehalobacter sp. DCA]
gi|410660283|ref|YP_006912654.1| DNA mismatch repair protein MutL [Dehalobacter sp. CF]
gi|409019602|gb|AFV01633.1| DNA mismatch repair protein MutL [Dehalobacter sp. DCA]
gi|409022639|gb|AFV04669.1| DNA mismatch repair protein MutL [Dehalobacter sp. CF]
Length = 681
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 94/197 (47%), Gaps = 26/197 (13%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFE---RLSQSTVLNQQPLLRPLKL 670
F +K +GQ +I+ D++L+I+DQHAA E+ +E RL++ + Q LL P +
Sbjct: 490 FLELKAVGQVFHMYILAADDKNLYIIDQHAAHERIRYESLLRLAKRSEAASQLLLIPETV 549
Query: 671 DLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIST 730
+LT +EE + H D + GF E + L+ VP + + + K I
Sbjct: 550 ELTVQEEQILLAHFDELHGMGFIFEH----FGDRTYFLRGVPLLENLESPGKMFKAFIDE 605
Query: 731 LADNQGECSIISSYKMDTADSVCPSRVRAM---LASRACRSSIMIGDALGRNEMQKILEH 787
+ + S PS + + + ACRS++ + L EM +I++
Sbjct: 606 ILNT----------------SFSPSLEKLLEEWIMMLACRSAVKGKERLMVQEMDEIIQK 649
Query: 788 LADLNSPWNCPHGRPTM 804
L ++P++CPHGRPT+
Sbjct: 650 LGRADNPYSCPHGRPTI 666
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 45/68 (66%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ + + +++I AG+V++ S VKELVEN+LDAGA I+I+++ G +V D+G G
Sbjct: 5 IKLLEEHCINQIAAGEVVERPLSVVKELVENALDAGARKIDISIEGGGTALIRVKDDGAG 64
Query: 72 ISPNNFKV 79
I + ++
Sbjct: 65 ILAEDLRL 72
Score = 46.2 bits (108), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 68/138 (49%), Gaps = 12/138 (8%)
Query: 109 SVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQ 168
+++L T G+ SL + I V G + + P++ + +S ++ G++S P G
Sbjct: 195 NILLHTPGNGSLIEAIAAVSGNDAARKMLPIS-YQDESLEIFGYVSMPEHVRSSRSG--L 251
Query: 169 YFFVNDRPVDLPKVSKLVNELYKGAN-----SRQYPIAIMNFIVPTRACDVNVTPDKRKV 223
FFVN R + S+L+N+ K + YP+ +++ +P DVNV P K ++
Sbjct: 252 TFFVNGRVIR----SQLMNQAIKDGYHTLIPANTYPVCVISLNLPPSDYDVNVHPAKLEI 307
Query: 224 FFSDECSILHALREGLQE 241
F +E + + E +Q+
Sbjct: 308 KFKEEKELSRKITEVIQK 325
>gi|294909571|ref|XP_002777798.1| DNA mismatch repair protein PMS1, putative [Perkinsus marinus ATCC
50983]
gi|239885760|gb|EER09593.1| DNA mismatch repair protein PMS1, putative [Perkinsus marinus ATCC
50983]
Length = 871
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/130 (40%), Positives = 69/130 (53%), Gaps = 7/130 (5%)
Query: 611 KEDFGRMKVIGQFNLGFIIGKLD-QDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLK 669
KEDF M+VIGQFN GFII L+ + LFI+DQHA DEK FE L++++ L QP++ P++
Sbjct: 686 KEDFEAMRVIGQFNKGFIITALEGRWLFILDQHACDEKTIFETLNKTSELKSQPMIVPVR 745
Query: 670 LDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITF------GVED 723
L L P E I GF A G R +L ++ + + F ED
Sbjct: 746 LSLPPPLESCIRGSRREIEACGFRFNFADDAPIGSRVQLTSLGVASGLGFERSRPLTKED 805
Query: 724 VKDLISTLAD 733
DL S L D
Sbjct: 806 FVDLASLLLD 815
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 46/78 (58%), Gaps = 4/78 (5%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I + + VV ICA QV+ LS VKEL+ENSLDAGA +I + L G + V D+GCG
Sbjct: 13 ITSLTRDVVDSICAAQVVTSLSQCVKELLENSLDAGARNITVTLVNNGVDMIAVSDDGCG 72
Query: 72 ISPNNFKVRAVFLCQAYA 89
+S N+ LC +A
Sbjct: 73 VSEENWST----LCSWHA 86
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 84/183 (45%), Gaps = 13/183 (7%)
Query: 82 VFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAI 141
V L QAYA+I V F T G+++ + + ++++ + + + + V
Sbjct: 193 VGLMQAYAVIRHDVAFRLT-CDGRSLLATNPEDDMETAIR-KVCCISAAELASMTRLVLE 250
Query: 142 CKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLP-KVSKLVNELYK--------G 192
+ ++G LS P + Q+ +V RPVD+P +VS+ +N+LYK
Sbjct: 251 DEGGRWSLKGCLSPPTSVLRPGVVHAQWLYVGGRPVDMPTRVSRCINQLYKRFQTTVALE 310
Query: 193 ANSRQYPIAIMNFIVP--TRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASY 250
S + +A+++ + A DVN + DKR V E + + E ++E +S ++
Sbjct: 311 RKSGRTWLAVLSIVFGEGVDAADVNSSKDKRSVILDFETELCDKITEAVEEEWSSASSQT 370
Query: 251 SVN 253
+V
Sbjct: 371 AVQ 373
>gi|422343284|ref|ZP_16424212.1| hypothetical protein HMPREF9432_00272 [Selenomonas noxia F0398]
gi|355378591|gb|EHG25771.1| hypothetical protein HMPREF9432_00272 [Selenomonas noxia F0398]
Length = 621
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 94/194 (48%), Gaps = 25/194 (12%)
Query: 615 GRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQST--VLNQQPLLRPLKLDL 672
G + IGQ +L +II + Q L+I+DQHAA E+ F+R S + +QQ L+ + L
Sbjct: 430 GSLLPIGQVDLTYIIAQSAQTLYIIDQHAAHERILFDRFSAHADGIPSQQMLVHAI-LSF 488
Query: 673 TPEEEVVASMHMDIIRKNGFSLEEDPHALAGLR-FRLKAVPFSKKITFGVEDVKDLISTL 731
E + ++ + GF LE AG R +RL P + +++++ +L
Sbjct: 489 DAHEAQYIEENAELFDRLGFHLEP-----AGEREYRLTEAPADIPLDEAEATIREILISL 543
Query: 732 ADNQGECSIISSYKMDTADSVCPSRVR-AMLASRACRSSIMIGDALGRNEMQKILEHLAD 790
D + P+ +R A +A+ ACR++I G+ L +M+ +L L
Sbjct: 544 GDLH---------------AATPAHLRQAGIATMACRAAIKAGEELSIRQMEILLAELCA 588
Query: 791 LNSPWNCPHGRPTM 804
P+ CPHGRPT+
Sbjct: 589 TPFPFTCPHGRPTI 602
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 67/132 (50%), Gaps = 4/132 (3%)
Query: 106 NVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDS-CKVEGFLSKPGQGSGRNL 164
N + L T G SL I +++G + L P+ +++ ++ G++SKP R+
Sbjct: 191 NNNRLTLMTAGDGSLHHTIESIYGGDAAAALIPLDFHDAEADIRITGYISKPSMI--RSS 248
Query: 165 GDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQ-YPIAIMNFIVPTRACDVNVTPDKRKV 223
Q + VN R + ++K ++ +Y+ + +P+A++ VP R DVNV P K ++
Sbjct: 249 RAWQTYIVNGRTIQNRAIAKAIDNVYRALVPKMGFPLAVLCIEVPQRTIDVNVHPQKTEL 308
Query: 224 FFSDECSILHAL 235
F DE I A+
Sbjct: 309 KFEDEGRIFKAV 320
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 43/62 (69%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I ++ +++I AG+V++ +S VKELVEN++DAGA ++E+ + G + +V DNG G
Sbjct: 4 IHVLDDTTINKIAAGEVVERPASVVKELVENAIDAGAAAVEVEIMGGGTSFIRVTDNGHG 63
Query: 72 IS 73
++
Sbjct: 64 MA 65
>gi|311302916|gb|ADP89032.1| PMS1-like protein [Trichomonas vaginalis]
gi|311302920|gb|ADP89034.1| PMS1-like protein [Trichomonas vaginalis]
Length = 539
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 84/169 (49%), Gaps = 18/169 (10%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLT 673
F M++IGQ+N FII K D++ +DQHAA E NFE+L + + Q L+ P+ + T
Sbjct: 389 FKDMEIIGQWNQSFIITKYGCDIYAIDQHAAMEAQNFEKLRKKCSIQSQRLISPIVISAT 448
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
P+E A ++ G+ + +++ +K +P + G +D+ +LI+ L +
Sbjct: 449 PQEISAAEECKQKCKEFGYDYDISDNSIL-----VKKIPSITTVATGSDDLLELITMLHE 503
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQ 782
+ A + R +A RAC SS+ +GD + ++M+
Sbjct: 504 SP-------------ASQPMTRKARIWMAYRACHSSVRVGDTMNHSQMK 539
>gi|339627923|ref|YP_004719566.1| DNA mismatch repair protein MutL [Sulfobacillus acidophilus TPY]
gi|379007556|ref|YP_005257007.1| DNA mismatch repair protein MutL [Sulfobacillus acidophilus DSM
10332]
gi|339285712|gb|AEJ39823.1| putative DNA mismatch repair protein MutL [Sulfobacillus
acidophilus TPY]
gi|361053818|gb|AEW05335.1| DNA mismatch repair protein MutL [Sulfobacillus acidophilus DSM
10332]
Length = 572
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 106/246 (43%), Gaps = 33/246 (13%)
Query: 579 AAATLELSQPENEERKARALAAA-----TTELE-------RLFRKEDFGRMKVIGQFNLG 626
AA L+ P E +AR LA T EL R ++ + + Q+
Sbjct: 330 AAKPFALNAPAVSEEEARDLAPGPVLQPTWELSGPPAGLGSASRHPEYAGLVPLAQWQAK 389
Query: 627 FIIGKLDQDLFIVDQHAADEKYNFERLSQ--STVLNQQPLLRPLKLDLTPEEEVVASMHM 684
+I+ + L+I+DQHAA E+ FE + V QPLL L+ E H
Sbjct: 390 YILAQGPDGLYIIDQHAAHERIYFEHFRRVGEAVRTSQPLLMAQTETLSAAEWATYQDHR 449
Query: 685 DIIRKNGFSLEEDPHALAGLRFRLKAVPFS-KKITFGVEDVKDLISTLAD--NQGECSII 741
+ +R GF L E L G ++AVP + + +T ++ ++ L + + G I
Sbjct: 450 EHLRTLGFDLVE----LGGTTVAIQAVPTAFRDVTHYAGVLRTVLQALEEPTHAGMSHPI 505
Query: 742 SSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGR 801
S + + A AC+++I L EMQ +++ LA+ P CPHGR
Sbjct: 506 SWVE------------EPLFAMAACKAAIKANRPLSHQEMQALIDDLAETEDPRGCPHGR 553
Query: 802 PTMRHL 807
PT+ HL
Sbjct: 554 PTILHL 559
Score = 47.0 bits (110), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I ++ V ++I AG+V++ +S VKEL+ENS DA A + L E G V D+G G
Sbjct: 4 IHRLDPVVANQIAAGEVVERPASIVKELLENSFDANAGQCRVVLDEGGLARISVKDDGIG 63
Query: 72 ISPNNFKV 79
+ P + +
Sbjct: 64 MGPEDLML 71
>gi|435853701|ref|YP_007315020.1| DNA mismatch repair protein MutL [Halobacteroides halobius DSM
5150]
gi|433670112|gb|AGB40927.1| DNA mismatch repair protein MutL [Halobacteroides halobius DSM
5150]
Length = 611
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 93/191 (48%), Gaps = 22/191 (11%)
Query: 620 IGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERL---SQSTVLNQQPLLRPLKLDLTPEE 676
+GQ + +I+ + ++I+DQHAA E+ +++L + + Q LL PL+LDLT +E
Sbjct: 428 LGQIHQTYIVAQGQDGMYIIDQHAAHERIIYDQLLSKFKKQEIQIQELLVPLQLDLTYQE 487
Query: 677 EVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQG 736
+ + + GF+LEE + ++ VP + ++D K LI DN
Sbjct: 488 VQLLKERKERLEGLGFNLEE----FGESSYLVRGVPIQ---LYNLDD-KQLILDSIDNLL 539
Query: 737 ECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWN 796
+ +Y++ V + AC+++I GD L EM +L + + + N
Sbjct: 540 AQEVTENYQL----------VEGFITMMACKTAIKGGDKLSTTEMNHLLGQIKEYDVT-N 588
Query: 797 CPHGRPTMRHL 807
CPHGRP M HL
Sbjct: 589 CPHGRPVMMHL 599
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 60/93 (64%), Gaps = 2/93 (2%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ ++K V ++I AG+V++ +S VKELVENS+DAG++ IE+ +K G++ Q++DNG G
Sbjct: 4 IQILSKEVANKIAAGEVVERPASVVKELVENSIDAGSSKIEVKVKNGGKDLIQIIDNGVG 63
Query: 72 ISPNNFKVRAVFLCQAYALIAKGVRFVCTNTTG 104
++ + +V+ F A + I++ T G
Sbjct: 64 LAED--EVKLAFQRHATSKISRANDLFTLRTLG 94
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 67/131 (51%), Gaps = 6/131 (4%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDS-CKVEGFLSKPGQGSGRNLGDRQY 169
+++T G+ +L D I ++G ++ E + + D+ ++ G++SKP R+ Q
Sbjct: 196 IVETTGNGNLLDVIFNIYGRDV--AKEMIEVDYQDNYMQLTGYISKPT--ITRSSRRHQS 251
Query: 170 FFVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDE 228
+FVNDR + +SK V E Y + +YPI ++ + DVN+ P K + FS
Sbjct: 252 YFVNDRFIKSGLMSKAVKEAYHTLLTIDRYPIVVLKLKLNPVHVDVNIHPTKLQAKFSRG 311
Query: 229 CSILHALREGL 239
+ +++G+
Sbjct: 312 NVVYELVKDGV 322
>gi|448683833|ref|ZP_21692453.1| DNA mismatch repair protein MutL [Haloarcula japonica DSM 6131]
gi|445783406|gb|EMA34235.1| DNA mismatch repair protein MutL [Haloarcula japonica DSM 6131]
Length = 717
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 85/339 (25%), Positives = 132/339 (38%), Gaps = 55/339 (16%)
Query: 503 SSSNDLKKNSEDLSVAASHLQFSGSILDAPVPSSSLDICSTLQFSIQDLRKRRQ------ 556
S S+DL E + A + S D P+ SS D + S Q R Q
Sbjct: 379 SDSDDLDAGDEAATSARPDSTTTESDADTPLQKSSPDPTERPE-SAQTERAGHQSAETPS 437
Query: 557 -------QRLSIMQSSCHTSGSVKMRRCFAAATLELSQPENEERKARALAAATTELERLF 609
+R S ++ TSG RR + +S ++ + A A TE ER
Sbjct: 438 SDRSADAKRASTTEAKDDTSGGSGERRTEGS----VSSGDSAGARRDASVAGRTETERGE 493
Query: 610 RK------------------EDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFE 651
RK E M+++GQ +++ + D L +VDQHAADE+ N+E
Sbjct: 494 RKFTGGQEQTHLGDAPEASHESLPSMRILGQLADTYVVAETDDGLVLVDQHAADERVNYE 553
Query: 652 RLSQ--STVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLR-FRL 708
RL Q L P++L+LT E V D + GF A G R +
Sbjct: 554 RLKAKFEGETTTQALADPVELELTAREADVFDRRSDALASLGFHT-----AQTGERSVEV 608
Query: 709 KAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRS 768
+ +P G + V+D++ E + +L AC
Sbjct: 609 RTLPGVIADAAGPDIVRDVLGAFVSGDDEAAATVEAAA-----------DELLGDLACYP 657
Query: 769 SIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHL 807
S+ +L ++++L L + +P+ CPHGRPT+ H+
Sbjct: 658 SVTGNTSLTEGSVRELLAALDECENPYACPHGRPTIIHI 696
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 41/61 (67%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ ++ V RI AG+V++ +S VKELVEN++DA A +++ ++ G + QV D+G G
Sbjct: 4 IQRLDDRTVERIAAGEVVERPASVVKELVENAIDADANRVDVVVEAGGTDGIQVTDDGVG 63
Query: 72 I 72
+
Sbjct: 64 M 64
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 71/186 (38%), Gaps = 35/186 (18%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCK--------------VEGFLSKP 156
T G L++ +++V+G + + V + V G +S P
Sbjct: 197 TFSTTGQGDLRETVMSVYGREVAESMISVGAGSEANAGGDDAGSFPDGPLDGVHGLVSHP 256
Query: 157 GQGSGRNLGDRQYF--FVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACD 213
N R+Y +VN R V V V + Y + +YP A++ VP D
Sbjct: 257 ET----NRSGREYLSTYVNGRYVRAGTVRDAVVDAYGTQIAPDRYPFAVLFLDVPAGDVD 312
Query: 214 VNVTPDKRKVFFSDECSILHA---------LREGLQEIYSPNNASYSVNKVEQL-IEPEK 263
VNV P K +V F+D+ + LREGL +P S EQ I PE
Sbjct: 313 VNVHPRKMEVRFADDEGVREQVRTAVEDALLREGLLRSTAPRGRSAP----EQTEITPES 368
Query: 264 SGPSSG 269
G S G
Sbjct: 369 DGTSDG 374
>gi|448599456|ref|ZP_21655360.1| DNA mismatch repair protein MutL [Haloferax alexandrinus JCM 10717]
gi|445736917|gb|ELZ88457.1| DNA mismatch repair protein MutL [Haloferax alexandrinus JCM 10717]
Length = 563
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 20/204 (9%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQ---STVLNQQPLLRPLKL 670
F ++VIG+F +++ + D +L +VDQHAA E+ N+ERL + S ++ + P +
Sbjct: 367 FDDLRVIGRFRGLYLLCEADDELLVVDQHAAHERINYERLREAVESAGIDSAAVDPPATV 426
Query: 671 DLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIST 730
L+P + + + D++ K GF + E +R++AVP F +
Sbjct: 427 SLSPGDAALLDANRDLVEKLGFRVVEFGEGGGTGTYRVEAVPAPLGRPF---------AP 477
Query: 731 LADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLAD 790
A + + D D +L AC SI GD L +E +++E L
Sbjct: 478 DALADVVADVAAGDDADPRDE--------LLKDLACHPSIKAGDDLTDDEAARLVERLGS 529
Query: 791 LNSPWNCPHGRPTMRHLVDLTTIR 814
+P+ CPHGRPT+ + + T +R
Sbjct: 530 CGTPYTCPHGRPTVLAIDEETFVR 553
Score = 46.2 bits (108), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 22 RICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGIS 73
+I AG+V+ +S V EL+EN+LDAGA ++E + G + +V D+G G++
Sbjct: 12 KIAAGEVVARPASVVVELIENALDAGAETVETDVDGDGTDRIRVADDGRGMA 63
>gi|410171077|ref|XP_003961045.1| PREDICTED: postmeiotic segregation increased 4-like protein-like
[Homo sapiens]
gi|410171079|ref|XP_003961046.1| PREDICTED: postmeiotic segregation increased 4-like protein-like
[Homo sapiens]
gi|410172261|ref|XP_003960454.1| PREDICTED: postmeiotic segregation increased 4-like protein-like
[Homo sapiens]
Length = 255
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 52/67 (77%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+PI++ VH+IC+G V+ LS+AVK++V NSLDAGAT+I++ LK+YG + +V NGCG
Sbjct: 30 IKPIDRKSVHQICSGPVVLSLSTAVKKIVGNSLDAGATNIDLKLKDYGMDLIEVSGNGCG 89
Query: 72 ISPNNFK 78
+ NF+
Sbjct: 90 VEEENFE 96
>gi|255101104|ref|ZP_05330081.1| DNA mismatch repair protein [Clostridium difficile QCD-63q42]
Length = 655
Score = 80.5 bits (197), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 92/198 (46%), Gaps = 23/198 (11%)
Query: 610 RKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTV---LNQQPLLR 666
RK VIG +II D ++++DQHAA E+ +ER + +N Q LL
Sbjct: 462 RKFSLYGYSVIGVVFNTYIILSKDDSMYLLDQHAAHERILYERYMEKFYRQDINMQILLD 521
Query: 667 PLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKD 726
P+ ++++ + + ++++ K GF LE ++ VP FGV + +
Sbjct: 522 PVVIEVSNVDMLQIENNLELFMKFGFELE----IFGNNHIMVRCVP----TIFGVPETEK 573
Query: 727 LISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILE 786
I + DN E I S+Y + AS ACRS+I D + E++ +LE
Sbjct: 574 FILQIIDNIEE--ITSNYDLKGE----------RFASMACRSAIKANDKIYDIEIKSLLE 621
Query: 787 HLADLNSPWNCPHGRPTM 804
L +P+ CPHGRP M
Sbjct: 622 QLEKCENPFTCPHGRPIM 639
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 66/126 (52%), Gaps = 24/126 (19%)
Query: 20 VHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFKV 79
+++I AG+V++ SS VKEL+ENS+DAGA I I + + G+ ++ DNG GI + +V
Sbjct: 13 INKIAAGEVVERPSSVVKELIENSIDAGANKISIDIIDGGKSLIKITDNGIGIPSS--EV 70
Query: 80 RAVFLCQA----------YALIAKGVRFVCTNTTGKNVKSV--VLKTQGSSSLKDNIITV 127
FL A Y L + G R G+ + S+ V K + ++ KD II
Sbjct: 71 EKSFLRHATSKIKKIDDLYDLYSLGFR-------GEALASISAVSKLEMTTKTKDEII-- 121
Query: 128 FGMNIY 133
G IY
Sbjct: 122 -GTKIY 126
>gi|220932003|ref|YP_002508911.1| DNA mismatch repair protein MutL [Halothermothrix orenii H 168]
gi|254766169|sp|B8CX97.1|MUTL_HALOH RecName: Full=DNA mismatch repair protein MutL
gi|219993313|gb|ACL69916.1| DNA mismatch repair protein MutL [Halothermothrix orenii H 168]
Length = 644
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 107/205 (52%), Gaps = 26/205 (12%)
Query: 611 KEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNF----ERLSQSTVLNQQPLLR 666
K D +V+GQ +II + L+I+DQH A E+ + E+ + S +++Q PL+
Sbjct: 450 KMDIPIKRVLGQIKNTYIIAEGRDGLYIIDQHNAHERILYQSFIEKYNNSEIVSQ-PLVV 508
Query: 667 PLKLDLT-PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVK 725
P+ ++ T PE EV+ S ++ + K GF LE + G+ +F V +V
Sbjct: 509 PVNIETTAPEAEVLKS-YLPQLEKMGFKLE-----VFGIN------------SFIVREVP 550
Query: 726 DLISTLADNQGECSIISSYKMDTADSVCPSR-VRAMLASRACRSSIMIGDALGRNEMQKI 784
LI ++ + +I ++ ++ PS + +++ +CR +I G+ L + E ++I
Sbjct: 551 SLIKKRSNKRVVREVIDKL-LEHDKAMKPSELINEIISYMSCRGAIKAGEYLDKKEAEQI 609
Query: 785 LEHLADLNSPWNCPHGRPTMRHLVD 809
+E L ++P+ CPHGRP + H+ +
Sbjct: 610 IEGLFKTDNPYRCPHGRPIIIHITE 634
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 47/70 (67%)
Query: 10 PTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNG 69
P I+ + + V ++I AG+V++ +S VKELVENSLDAG+ I I ++ G++ +V DNG
Sbjct: 2 PEIKRLPESVANQISAGEVVERPASVVKELVENSLDAGSNKILIEIENGGKDLIRVKDNG 61
Query: 70 CGISPNNFKV 79
GI + ++
Sbjct: 62 HGIPSDEIEI 71
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 71/155 (45%), Gaps = 15/155 (9%)
Query: 89 ALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDS-C 147
AL GV F + +VLKT G+ D I ++G + L V I D
Sbjct: 179 ALAYPGVNFTLIHNG-----RIVLKTPGTGKTLDCIYAIYGKEMAQSL--VKIDYEDRYI 231
Query: 148 KVEGFLSKPGQGSGRNLGDRQY--FFVNDRPVDLPKVSKLVNELYKGA-NSRQYPIAIMN 204
KV G++S+P +R Y FFVN R V +++ V E Y+G YP+ +N
Sbjct: 232 KVSGYISRPDYYRY----NRSYEIFFVNKRAVHNSILNRGVEEAYQGLLPPGAYPVVFLN 287
Query: 205 FIVPTRACDVNVTPDKRKVFFSDECSILHALREGL 239
+ DVNV P K++V FS + I ++ G+
Sbjct: 288 LKLNPILVDVNVHPTKKEVKFSRDKVIKEVIQNGI 322
>gi|410171081|ref|XP_003961047.1| PREDICTED: postmeiotic segregation increased 4-like protein-like
[Homo sapiens]
Length = 255
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 52/67 (77%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+PI++ VH+IC+G V+ LS+AVK++V NSLDAGAT+I++ LK+YG + +V NGCG
Sbjct: 30 IKPIDRKSVHQICSGPVVLSLSTAVKKIVGNSLDAGATNIDLKLKDYGMDLIEVSGNGCG 89
Query: 72 ISPNNFK 78
+ NF+
Sbjct: 90 VEEENFE 96
>gi|4239954|dbj|BAA74755.1| PMS2L15 [Homo sapiens]
Length = 148
Score = 80.1 bits (196), Expect = 4e-12, Method: Composition-based stats.
Identities = 36/78 (46%), Positives = 56/78 (71%)
Query: 1 MDVETPTNSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGE 60
+D + + I+PI++ VH+IC+G V+ LS+AVK++V NSLDAGAT+I++ LK+YG
Sbjct: 59 LDFFSTEPAKAIKPIDRKSVHQICSGPVVLSLSTAVKKIVGNSLDAGATNIDLKLKDYGM 118
Query: 61 EWFQVVDNGCGISPNNFK 78
+ +V NGCG+ NF+
Sbjct: 119 DLIEVSGNGCGVEEENFE 136
>gi|317500421|ref|ZP_07958645.1| DNA mismatch repair protein MutL [Lachnospiraceae bacterium
8_1_57FAA]
gi|331089572|ref|ZP_08338471.1| hypothetical protein HMPREF1025_02054 [Lachnospiraceae bacterium
3_1_46FAA]
gi|336438887|ref|ZP_08618508.1| hypothetical protein HMPREF0990_00902 [Lachnospiraceae bacterium
1_1_57FAA]
gi|316898176|gb|EFV20223.1| DNA mismatch repair protein MutL [Lachnospiraceae bacterium
8_1_57FAA]
gi|330404940|gb|EGG84478.1| hypothetical protein HMPREF1025_02054 [Lachnospiraceae bacterium
3_1_46FAA]
gi|336017377|gb|EGN47139.1| hypothetical protein HMPREF0990_00902 [Lachnospiraceae bacterium
1_1_57FAA]
Length = 692
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 101/205 (49%), Gaps = 26/205 (12%)
Query: 606 ERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERL---SQSTVLNQQ 662
E ++E +IGQ + + + L+I+DQHAA E+ +ER +S Q
Sbjct: 492 ENFLKREVKAEYTLIGQVFDTYWLVQFQDSLYIIDQHAAHERVMYERTLKEMKSREYTSQ 551
Query: 663 PLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGV- 721
L P+ L L+ +E + H+D + GF +E G + ++AVP + FG+
Sbjct: 552 YLSPPIILSLSMQEAQLLEEHIDRFTRIGFEIEH----FGGEEYAVRAVPDN---LFGIA 604
Query: 722 --EDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRN 779
E + ++I LAD ++T S+ P + +AS +C++++ + L
Sbjct: 605 KKELLMEMIDDLADG-----------INT--SMTPDLIDEKVASMSCKAAVKGNNRLSAK 651
Query: 780 EMQKILEHLADLNSPWNCPHGRPTM 804
E+ ++ L L++P++CPHGRPT+
Sbjct: 652 EVDALIGELLTLDNPYHCPHGRPTI 676
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 10 PTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNG 69
P I+ +++ + +I AG+VI+ +S VKELVEN++DA ATS+ + +K+ G + +V DNG
Sbjct: 2 PHIQVLDQITIDKIAAGEVIERPASIVKELVENAIDAKATSVTVEIKDGGISFIRVTDNG 61
Query: 70 CGISPNNFKVRAVFLCQAYALIAKGVRFVCTNTTG 104
CGI + +VR FL + + I V ++ G
Sbjct: 62 CGIEAD--EVRCAFLRHSTSKIRTAEELVSIHSLG 94
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 65/132 (49%), Gaps = 8/132 (6%)
Query: 112 LKTQGSSSLKDNIITVFGMNIY-NCLEPVAICKSDSCKVEGFLSKPGQGSG-RNLGDRQY 169
L+T G+ LKD I V+G + N LE K D + GFL KP G RN +
Sbjct: 197 LRTSGNGKLKDVIYNVYGREVTSNLLE--LDYKKDGLSISGFLGKPVITRGNRNFEN--- 251
Query: 170 FFVNDRPVDLPKVSKLVNELYKGAN-SRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDE 228
FFVN R V +SK + + YK ++P A+++F V DVNV P K ++ F +
Sbjct: 252 FFVNGRYVKSAMLSKSLEDAYKDFTMQHKFPFAVLHFQVEGDLIDVNVHPTKMELRFQRQ 311
Query: 229 CSILHALREGLQ 240
+ + + E +
Sbjct: 312 QEVYNTMYEAVH 323
>gi|289432881|ref|YP_003462754.1| DNA mismatch repair protein MutL [Dehalococcoides sp. GT]
gi|288946601|gb|ADC74298.1| DNA mismatch repair protein MutL [Dehalococcoides sp. GT]
Length = 566
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 97/204 (47%), Gaps = 27/204 (13%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQ--QPLLRPLKLDLTP 674
++++GQ +++ + L+I+DQHAA E+ +E ++ T + Q LL P L+L P
Sbjct: 384 LRLVGQVGGLYLLAEGPDGLYIIDQHAAHERIRYEEIAAETYSARACQSLLEPFILELNP 443
Query: 675 EEEVVASMHMDIIRKNGFSLEEDPHALAGLR-FRLKAVPFSKKITFGVEDVKDLISTLAD 733
+E + + GF +EE G R +R+K++P K K L++ LAD
Sbjct: 444 VQEAMIEKCKSELELMGFEMEE-----FGRRVYRVKSIPAGLK----AHQAKALLAELAD 494
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNS 793
N D + +R M AC +++ G L EM+++L L
Sbjct: 495 N----------PKDAPAEIKERLIRLM----ACHTAVRAGQVLTDAEMRELLLKLEKTGI 540
Query: 794 PWNCPHGRPTMRHLVDLTTIRKNI 817
P +CPHGRPT+ +D + + K+
Sbjct: 541 PGHCPHGRPTIVK-IDFSQLEKDF 563
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 45/62 (72%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ ++K + RI AG+VI+ +S VKEL+ENSLDA A ++I ++E G + +V D+GCG
Sbjct: 3 IKLLDKATIARIAAGEVIERPASVVKELLENSLDAEAKRVDIVIREGGIGYIEVSDDGCG 62
Query: 72 IS 73
I+
Sbjct: 63 IT 64
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 91/194 (46%), Gaps = 12/194 (6%)
Query: 73 SPNNFKVRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNI 132
+P + + + +YAL V+F N G+N L T G+ L+D ++ V+G +
Sbjct: 162 TPQHEASKVTEVVVSYALAYPEVKF-SLNVDGRNT----LNTPGNGKLRDAVLEVYGSDA 216
Query: 133 YNCLEPVA--ICKSDSCKVEGFLSKPGQG-SGRNLGDRQYFFVNDRPVDLPKVSKLVNEL 189
+ + + +S + + G +S P S RN +FFVN R + + + V +
Sbjct: 217 ASKMLDLENDTYRSSAINISGLVSPPEVSRSNRN---SLHFFVNRRLIQSRALQRAVEQA 273
Query: 190 YKGA-NSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNA 248
Y G + +YP+ ++N + DVN+ P K +V FSDE ++ +++ ++ +
Sbjct: 274 YSGLLTAGRYPMGVINIRLSGALVDVNIHPTKAEVKFSDESAVFTSVQRAVRSVLVEKPP 333
Query: 249 SYSVNKVEQLIEPE 262
V + + +PE
Sbjct: 334 LLHVEEARPVYQPE 347
>gi|126699585|ref|YP_001088482.1| DNA mismatch repair protein [Clostridium difficile 630]
gi|115251022|emb|CAJ68851.1| DNA mismatch repair protein MutL [Clostridium difficile 630]
Length = 655
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 92/198 (46%), Gaps = 23/198 (11%)
Query: 610 RKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTV---LNQQPLLR 666
RK VIG +II D ++++DQHAA E+ +ER + +N Q LL
Sbjct: 462 RKFSLYGYSVIGVVFNTYIILSKDDSMYLLDQHAAHERILYERYMEKFYRQDINMQILLD 521
Query: 667 PLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKD 726
P+ ++++ + + ++++ K GF LE ++ VP FGV + +
Sbjct: 522 PVVIEVSNVDMLQIENNLELFMKFGFELE----IFGNNHIMVRCVP----TIFGVPETEK 573
Query: 727 LISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILE 786
I + DN E I S+Y + AS ACRS+I D + E++ +LE
Sbjct: 574 FILQIIDNIEE--ITSNYDLKGE----------RFASMACRSAIKANDKIYDIEIKSLLE 621
Query: 787 HLADLNSPWNCPHGRPTM 804
L +P+ CPHGRP M
Sbjct: 622 QLEKCENPFTCPHGRPIM 639
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 66/126 (52%), Gaps = 24/126 (19%)
Query: 20 VHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFKV 79
+++I AG+V++ SS VKEL+ENS+DAGA I I + + G+ ++ DNG GI + +V
Sbjct: 13 INKIAAGEVVERPSSVVKELIENSIDAGANKISIDIIDGGKSLIKITDNGIGIPSS--EV 70
Query: 80 RAVFLCQA----------YALIAKGVRFVCTNTTGKNVKSV--VLKTQGSSSLKDNIITV 127
FL A Y L + G R G+ + S+ V K + ++ KD II
Sbjct: 71 EKSFLRHATSKIKKIDDLYDLYSLGFR-------GEALASISAVSKLEMTTKTKDEII-- 121
Query: 128 FGMNIY 133
G IY
Sbjct: 122 -GTKIY 126
>gi|73748885|ref|YP_308124.1| DNA mismatch repair protein, MutL [Dehalococcoides sp. CBDB1]
gi|73660601|emb|CAI83208.1| DNA mismatch repair protein, MutL [Dehalococcoides sp. CBDB1]
Length = 566
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 97/204 (47%), Gaps = 27/204 (13%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQ--QPLLRPLKLDLTP 674
++++GQ +++ + L+I+DQHAA E+ +E ++ T + Q LL P L+L P
Sbjct: 384 LRLVGQVGGLYLLAEGPDGLYIIDQHAAHERIRYEEIAAETYSARACQSLLEPFILELNP 443
Query: 675 EEEVVASMHMDIIRKNGFSLEEDPHALAGLR-FRLKAVPFSKKITFGVEDVKDLISTLAD 733
+E + + GF +EE G R +R+K++P K K L++ LAD
Sbjct: 444 VQEAMIEKCKSELELMGFEMEE-----FGRRVYRVKSIPAGLK----AHQAKALLAELAD 494
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNS 793
N D + +R M AC +++ G L EM+++L L
Sbjct: 495 N----------PKDAPAEIKERLIRLM----ACHTAVRAGQVLTDAEMRELLLKLEKTGI 540
Query: 794 PWNCPHGRPTMRHLVDLTTIRKNI 817
P +CPHGRPT+ +D + + K+
Sbjct: 541 PGHCPHGRPTIVK-IDFSQLEKDF 563
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 45/62 (72%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ ++K + RI AG+VI+ +S VKEL+ENSLDA A ++I ++E G + +V D+GCG
Sbjct: 3 IKLLDKATIARIAAGEVIERPASVVKELLENSLDAEAKRVDIVIREGGIGYIEVSDDGCG 62
Query: 72 IS 73
I+
Sbjct: 63 IT 64
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 91/194 (46%), Gaps = 12/194 (6%)
Query: 73 SPNNFKVRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNI 132
+P + + + +YAL V+F N G+N L T G+ L+D ++ V+G +
Sbjct: 162 TPQHEASKVTEVVVSYALAYPEVKF-SLNVDGRNT----LNTPGNGKLRDAVLEVYGSDA 216
Query: 133 YNCLEPVA--ICKSDSCKVEGFLSKPGQG-SGRNLGDRQYFFVNDRPVDLPKVSKLVNEL 189
+ + + +S + + G +S P S RN +FFVN R + + + V +
Sbjct: 217 ASKMLDLENDTYRSSAINISGLVSPPEVSRSNRN---SLHFFVNRRLIQSRALQRAVEQA 273
Query: 190 YKGA-NSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNA 248
Y G + +YP+ ++N + DVN+ P K +V FSDE ++ +++ ++ +
Sbjct: 274 YSGLLTAGRYPMGVINIRLSGALVDVNIHPTKAEVKFSDESAVFTSVQRAVRSVLVEKPP 333
Query: 249 SYSVNKVEQLIEPE 262
V + + +PE
Sbjct: 334 LLHVEEARPVYQPE 347
>gi|153853166|ref|ZP_01994575.1| hypothetical protein DORLON_00560 [Dorea longicatena DSM 13814]
gi|149753952|gb|EDM63883.1| DNA mismatch repair domain protein [Dorea longicatena DSM 13814]
Length = 701
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 99/202 (49%), Gaps = 20/202 (9%)
Query: 606 ERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTV---LNQQ 662
+ L +E + KV+GQ + + + D L+I+DQHAA E+ +E+ +S Q
Sbjct: 501 DHLLTREAMQKYKVVGQVFETYWLVEYDNSLYIIDQHAAHERVLYEKTLKSMKTREFTSQ 560
Query: 663 PLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVE 722
+ P+ L+L+ +E + + +MD + GF +EE F + ++ V
Sbjct: 561 MISPPIVLNLSMQEAELLNTYMDQFTRIGFEIEE----------------FGQD-SYAVR 603
Query: 723 DVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQ 782
V D + ++A + ++ S + + P + +AS +C++++ L E+
Sbjct: 604 AVPDNLFSIAKKELLIQMLDSLSDEITRNQSPDLIDEKIASMSCKAAVKGNMKLSVQEVD 663
Query: 783 KILEHLADLNSPWNCPHGRPTM 804
++ L L++P++CPHGRPT+
Sbjct: 664 ALIGELLSLDNPYHCPHGRPTI 685
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 52/73 (71%), Gaps = 2/73 (2%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ ++ + +I AG+VI+ +S VKELVEN++DAGAT+I + +KE G + ++ DNGCG
Sbjct: 4 IQVLDPITIDKIAAGEVIERPASVVKELVENAIDAGATAIVVEIKEGGISFMRITDNGCG 63
Query: 72 ISPNNFKVRAVFL 84
I ++ VR+ FL
Sbjct: 64 IERDD--VRSAFL 74
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 68/137 (49%), Gaps = 12/137 (8%)
Query: 112 LKTQGSSSLKDNIITVFGMNIY-NCLEPVAICKSDSCKVEGFLSKPGQGSG-RNLGDRQY 169
L T G+ LKD I ++G +I N L+ A + KV GFL KP G RN +
Sbjct: 197 LHTSGNGKLKDVIYHIYGRDIAANLLK--AEYDAKGLKVTGFLGKPIISRGNRNFEN--- 251
Query: 170 FFVNDRPVDLPKVSKLVNELYKGAN-SRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDE 228
++VN R +S+ + + YK +YP +++ + DVNV P K ++ F+++
Sbjct: 252 YYVNGRYAKNNIISRAIEDAYKDFTMQHKYPFVVLHIEIDGEHVDVNVHPTKMELRFNNQ 311
Query: 229 CSILHALR----EGLQE 241
+ +A+ +GL E
Sbjct: 312 QEVYNAIYSAVDQGLHE 328
>gi|406910910|gb|EKD50816.1| DNA mismatch repair protein [uncultured bacterium]
Length = 209
Score = 80.1 bits (196), Expect = 4e-12, Method: Composition-based stats.
Identities = 57/197 (28%), Positives = 92/197 (46%), Gaps = 19/197 (9%)
Query: 609 FRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERL---SQSTVLNQQPLL 665
F + + +M+V+GQ +++ + LFI+DQHAA E+ FE+L + + ++PLL
Sbjct: 11 FSRMPYAQMRVVGQILGSYLVCEAYDALFIIDQHAAHERIGFEKLLKEYEHKGIQKKPLL 70
Query: 666 RPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVK 725
DL P + + + D + GF ++ G F LKAVP ++ D+
Sbjct: 71 ISETFDLKPSDAALLKEYTDELNAFGFEID----FFGGNTFVLKAVP---QLPGSQIDIA 123
Query: 726 DLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKIL 785
+ L ++ E + S K +R A+LA AC + I G L E+Q++L
Sbjct: 124 MFVGDLVEDIKETGEMVSLK---------TRFHAVLARIACHAQIRAGHHLEPQEIQQLL 174
Query: 786 EHLADLNSPWNCPHGRP 802
L CPHGRP
Sbjct: 175 SDLDQHQFTDFCPHGRP 191
>gi|310642432|ref|YP_003947190.1| DNA mismatch repair protein mutl [Paenibacillus polymyxa SC2]
gi|386041502|ref|YP_005960456.1| DNA mismatch repair protein mutL [Paenibacillus polymyxa M1]
gi|309247382|gb|ADO56949.1| DNA mismatch repair protein mutL [Paenibacillus polymyxa SC2]
gi|343097540|emb|CCC85749.1| DNA mismatch repair protein mutL [Paenibacillus polymyxa M1]
Length = 698
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 90/195 (46%), Gaps = 23/195 (11%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYN----FERLSQSTVLNQQPLLRPLK 669
F + +IGQ + ++I + DQ L+++DQHAA E+ N +E+ ++Q+ LL P+
Sbjct: 507 FPELNLIGQHHGTYLIAQNDQGLYLIDQHAAHERVNYEFYYEKFGNPESVSQE-LLLPIT 565
Query: 670 LDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIS 729
L+ TP E + + G LE G FR+ + P+ + G E D+I
Sbjct: 566 LEFTPSETEKLKTRLHWFEQAGVYLEH----FGGQTFRVSSYPY--WLPKGEE--ADVIE 617
Query: 730 TLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLA 789
+A E I K+ A S+ S CR+SI L + +LE LA
Sbjct: 618 EMAGWVLEEKAIDLAKLREAASIMCS----------CRASIKANQKLTDRQASVLLERLA 667
Query: 790 DLNSPWNCPHGRPTM 804
P+ CPHGRP +
Sbjct: 668 ACKQPYTCPHGRPIV 682
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 53/83 (63%), Gaps = 2/83 (2%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR +++ + ++I AG+V++ +S VKELVEN++DAG T +++ ++E G + +V DNG G
Sbjct: 4 IRVLDEHIANQIAAGEVVERPASVVKELVENAIDAGGTRVDVWVEEGGLQSIRVTDNGSG 63
Query: 72 ISPNNFKVRAVFLCQAYALIAKG 94
I P + V F A + I G
Sbjct: 64 IEPED--VETAFYRHATSKIGHG 84
>gi|167758189|ref|ZP_02430316.1| hypothetical protein CLOSCI_00527 [Clostridium scindens ATCC 35704]
gi|336421687|ref|ZP_08601843.1| hypothetical protein HMPREF0993_01220 [Lachnospiraceae bacterium
5_1_57FAA]
gi|167664086|gb|EDS08216.1| DNA mismatch repair domain protein [Clostridium scindens ATCC
35704]
gi|336000158|gb|EGN30311.1| hypothetical protein HMPREF0993_01220 [Lachnospiraceae bacterium
5_1_57FAA]
Length = 652
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 101/202 (50%), Gaps = 20/202 (9%)
Query: 606 ERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTV---LNQQ 662
E L ++ K+IGQ + + + + L+I+DQHAA E+ +E+ +S Q
Sbjct: 452 ENLVERKVQAEYKIIGQVFETYWLVEFNDSLYIIDQHAAHERVLYEKTLKSMKTREFTSQ 511
Query: 663 PLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVE 722
+ P+ LDL+ +E + + +MD + GF +EE + ++AVP + FG+
Sbjct: 512 FISPPIVLDLSMQEAELLNQYMDQFTRIGFEIEE----FGQESYAVRAVPGN---LFGIA 564
Query: 723 DVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQ 782
KDL+ + D + + + ++ P + +AS +C++++ L E+
Sbjct: 565 K-KDLLLQMLDGLSD---------EVSRNLSPDMIDEKVASMSCKAAVKGNMKLSATEVD 614
Query: 783 KILEHLADLNSPWNCPHGRPTM 804
++ L L +P++CPHGRPT+
Sbjct: 615 SLIGELLTLENPYHCPHGRPTI 636
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 50/81 (61%), Gaps = 10/81 (12%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ ++ + +I AG+VI+ +S VKELVEN++DAGAT+I ++E G ++ DNGCG
Sbjct: 4 IQVLDPVTIDKIAAGEVIERPASVVKELVENAIDAGATAIVTEIEEGGISMIRIADNGCG 63
Query: 72 IS----PNNF------KVRAV 82
+ PN F K+R V
Sbjct: 64 MDASDVPNAFLRHSTSKIRTV 84
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 66/135 (48%), Gaps = 10/135 (7%)
Query: 112 LKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSG-RNLGDRQYF 170
L T G+ +LKD I V+G I L A +S K+ GFL KP G RN + +
Sbjct: 197 LHTSGNGNLKDVIYHVYGREIAANL-LAADYESPGLKIRGFLGKPLISRGNRNF---ENY 252
Query: 171 FVNDRPVDLPKVSKLVNELYKGAN-SRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDEC 229
F+N R V +SK + + YK +YP +++ + DVNV P K ++ F+++
Sbjct: 253 FINGRYVKSSIISKAIEDAYKDFTMQHKYPFVVLHIEIDGEHVDVNVHPTKMELRFNNQQ 312
Query: 230 ----SILHALREGLQ 240
SI A+ GL
Sbjct: 313 EVYNSIYAAVDHGLH 327
>gi|254975572|ref|ZP_05272044.1| DNA mismatch repair protein [Clostridium difficile QCD-66c26]
gi|255092960|ref|ZP_05322438.1| DNA mismatch repair protein [Clostridium difficile CIP 107932]
gi|255314701|ref|ZP_05356284.1| DNA mismatch repair protein [Clostridium difficile QCD-76w55]
gi|255517376|ref|ZP_05385052.1| DNA mismatch repair protein [Clostridium difficile QCD-97b34]
gi|255650482|ref|ZP_05397384.1| DNA mismatch repair protein [Clostridium difficile QCD-37x79]
gi|260683592|ref|YP_003214877.1| DNA mismatch repair protein [Clostridium difficile CD196]
gi|260687252|ref|YP_003218386.1| DNA mismatch repair protein [Clostridium difficile R20291]
gi|306520447|ref|ZP_07406794.1| DNA mismatch repair protein [Clostridium difficile QCD-32g58]
gi|384361213|ref|YP_006199065.1| DNA mismatch repair protein [Clostridium difficile BI1]
gi|260209755|emb|CBA63546.1| DNA mismatch repair protein [Clostridium difficile CD196]
gi|260213269|emb|CBE04803.1| DNA mismatch repair protein [Clostridium difficile R20291]
Length = 655
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 92/198 (46%), Gaps = 23/198 (11%)
Query: 610 RKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTV---LNQQPLLR 666
RK VIG +II D ++++DQHAA E+ +ER + +N Q LL
Sbjct: 462 RKFSLYGYSVIGVVFNTYIILSKDDSMYLLDQHAAHERILYERYMEKFYRQDINMQILLD 521
Query: 667 PLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKD 726
P+ ++++ + + ++++ K GF LE ++ VP FGV + +
Sbjct: 522 PVVIEVSNVDMLQIENNLELFMKFGFELE----IFGNNHIMVRCVP----TIFGVPETEK 573
Query: 727 LISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILE 786
I + DN E I S+Y + AS ACRS+I D + E++ +LE
Sbjct: 574 FILQIIDNIEE--ITSNYDLKGE----------RFASMACRSAIKANDKIYDIEIKSLLE 621
Query: 787 HLADLNSPWNCPHGRPTM 804
L +P+ CPHGRP M
Sbjct: 622 QLEKCENPFTCPHGRPIM 639
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 66/126 (52%), Gaps = 24/126 (19%)
Query: 20 VHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFKV 79
+++I AG+V++ SS VKEL+ENS+DAGA I I + + G+ ++ DNG GI + +V
Sbjct: 13 INKIAAGEVVERPSSVVKELIENSIDAGANKISIDIIDGGKSLIKITDNGIGIPSS--EV 70
Query: 80 RAVFLCQA----------YALIAKGVRFVCTNTTGKNVKSV--VLKTQGSSSLKDNIITV 127
FL A Y L + G R G+ + S+ V K + ++ KD II
Sbjct: 71 EKSFLRHATSKIKKIDDLYDLYSLGFR-------GEALASISAVSKLEMTTKTKDEII-- 121
Query: 128 FGMNIY 133
G IY
Sbjct: 122 -GTKIY 126
>gi|448723194|ref|ZP_21705719.1| DNA mismatch repair protein MutL [Halococcus hamelinensis 100A6]
gi|445788149|gb|EMA38871.1| DNA mismatch repair protein MutL [Halococcus hamelinensis 100A6]
Length = 552
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 86/204 (42%), Gaps = 36/204 (17%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERL-------------SQSTVLN 660
F + VIGQF +++ + D DL +VDQHAA E+ N+ERL Q V
Sbjct: 353 FESIAVIGQFRELYLLCEADDDLLVVDQHAAHERINYERLRAAVGDGGSNDGTGQGGV-- 410
Query: 661 QQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFG 720
+ + P +L LT E +A H + GF E D +L R+ VP
Sbjct: 411 ESADIEPRRLPLTASEAALAETHRGDLAAIGFRFETDRASL-----RVTGVPAPLGRVAS 465
Query: 721 VEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNE 780
E ++D + TLA + D D +L AC S+ GDAL
Sbjct: 466 PEALRDALDTLAAGE--------EPTDPRDE--------LLKEFACHPSLKAGDALTTEA 509
Query: 781 MQKILEHLADLNSPWNCPHGRPTM 804
+++ L + CPHGRPT+
Sbjct: 510 ATRLVRRLGACEQAFACPHGRPTV 533
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 40/62 (64%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I ++ V RI AG+V+ +S V ELVEN+LDAG S+EI ++ G + +V D+G G
Sbjct: 4 ITELDTETVERIAAGEVVTRPASVVVELVENALDAGTESVEITVENAGLDLIRVADDGHG 63
Query: 72 IS 73
++
Sbjct: 64 MA 65
Score = 45.8 bits (107), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 68/164 (41%), Gaps = 9/164 (5%)
Query: 87 AYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDS 146
YAL VRF T+ G+NV S T GS S D ++ V+G V ++D
Sbjct: 177 GYALTHPEVRFSLTHD-GRNVVS----TPGSGSYTDAVLGVYGRETAGESTTVD-HRADG 230
Query: 147 CKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGA-NSRQYPIAIMNF 205
+V G L P R VN R + + V E Y +YP+A+++
Sbjct: 231 IEVRGLLVYPSIT--RAGPTHVTTAVNGRTLRDSTIRGAVREGYGSLLPDGRYPVAVVDV 288
Query: 206 IVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNAS 249
+P + NV P K V F D ++ +A+ + S + S
Sbjct: 289 SLPPEDVNANVHPAKEAVAFHDSDAVANAVERAVSGALSTEDLS 332
>gi|153814909|ref|ZP_01967577.1| hypothetical protein RUMTOR_01124 [Ruminococcus torques ATCC 27756]
gi|145847940|gb|EDK24858.1| DNA mismatch repair domain protein [Ruminococcus torques ATCC
27756]
Length = 705
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 101/205 (49%), Gaps = 26/205 (12%)
Query: 606 ERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERL---SQSTVLNQQ 662
E ++E +IGQ + + + L+I+DQHAA E+ +ER +S Q
Sbjct: 505 ENFLKREVKAEYTLIGQVFDTYWLVQFQDSLYIIDQHAAHERVMYERTLKEMKSREYTSQ 564
Query: 663 PLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGV- 721
L P+ L L+ +E + H+D + GF +E G + ++AVP + FG+
Sbjct: 565 YLSPPIILSLSMQEAQLLEEHIDRFTRIGFEIEH----FGGEEYAVRAVPDN---LFGIA 617
Query: 722 --EDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRN 779
E + ++I LAD ++T S+ P + +AS +C++++ + L
Sbjct: 618 KKELLMEMIDDLADG-----------INT--SMTPDLIDEKVASMSCKAAVKGNNRLSAK 664
Query: 780 EMQKILEHLADLNSPWNCPHGRPTM 804
E+ ++ L L++P++CPHGRPT+
Sbjct: 665 EVDALIGELLTLDNPYHCPHGRPTI 689
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 59/95 (62%), Gaps = 2/95 (2%)
Query: 10 PTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNG 69
P I+ +++ + +I AG+VI+ +S VKELVEN++DA ATS+ + +K+ G + +V DNG
Sbjct: 15 PHIQVLDQITIDKIAAGEVIERPASIVKELVENAIDAKATSVTVEIKDGGISFIRVTDNG 74
Query: 70 CGISPNNFKVRAVFLCQAYALIAKGVRFVCTNTTG 104
CGI + +VR FL + + I V ++ G
Sbjct: 75 CGIEAD--EVRCAFLRHSTSKIRTAEELVSIHSLG 107
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 65/132 (49%), Gaps = 8/132 (6%)
Query: 112 LKTQGSSSLKDNIITVFGMNIY-NCLEPVAICKSDSCKVEGFLSKPGQGSG-RNLGDRQY 169
L+T G+ LKD I V+G + N LE K D + GFL KP G RN +
Sbjct: 210 LRTSGNGKLKDVIYNVYGREVTSNLLE--LDYKKDGLSISGFLGKPVITRGNRNFEN--- 264
Query: 170 FFVNDRPVDLPKVSKLVNELYKGAN-SRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDE 228
FFVN R V +SK + + YK ++P A+++F V DVNV P K ++ F +
Sbjct: 265 FFVNGRYVKSAMLSKSLEDAYKDFTMQHKFPFAVLHFQVEGDLIDVNVHPTKMELRFQRQ 324
Query: 229 CSILHALREGLQ 240
+ + + E +
Sbjct: 325 QEVYNTMYEAVH 336
>gi|311302918|gb|ADP89033.1| PMS1-like protein [Trichomonas vaginalis]
Length = 539
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 84/169 (49%), Gaps = 18/169 (10%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLT 673
F M++IGQ+N FII K D++ +DQHAA E NFE+L + + Q L+ P+ + T
Sbjct: 389 FKDMEIIGQWNQSFIITKYGCDIYAIDQHAAMEAQNFEKLRKKCSIQSQRLISPIVISAT 448
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
P+E A ++ G+ + +++ +K +P + G +D+ +LI+ L +
Sbjct: 449 PQEISAAEECKQKCKEFGYDYDISDNSIL-----VKKIPSITTVATGSDDLLELITMLHE 503
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQ 782
+ A + R +A RAC SS+ +GD + ++M+
Sbjct: 504 SP-------------ASQPMTRKARIWMAYRACHSSVRVGDTMNNSQMK 539
>gi|374308279|ref|YP_005054710.1| DNA mismatch repair protein MutL [Filifactor alocis ATCC 35896]
gi|320120485|gb|EFE28653.2| DNA mismatch repair protein MutL [Filifactor alocis ATCC 35896]
Length = 677
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 101/195 (51%), Gaps = 21/195 (10%)
Query: 613 DFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFER---LSQSTVLNQQPLLRPLK 669
++ ++ +G+ ++I ++ ++++DQHAA E+ FER L L+ Q LL P+
Sbjct: 484 NYEQLHYVGRVFSTYLIMTKEERMYLIDQHAAHERVLFERYMVLLHKDELSSQQLLNPIL 543
Query: 670 LDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIS 729
L+L+ E+ + M+ D I+K GF D L ++ VP + T G + + ++I
Sbjct: 544 LELSYEDATLVEMYRDEIQKLGF----DFDFLGEKVIVIRGVPVFFQETQGEQFMYEIIE 599
Query: 730 TLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLA 789
L +N+ + +Y+ + D V A++ACR++I D + E++ +L+ L
Sbjct: 600 LLQENKN----LENYE-EFIDKV---------ATKACRAAIKANDRIMDTEVEALLKDLN 645
Query: 790 DLNSPWNCPHGRPTM 804
++ + CPHGRP
Sbjct: 646 QCDNKYTCPHGRPVF 660
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 53/79 (67%), Gaps = 2/79 (2%)
Query: 15 INKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISP 74
+++ + +I AG+V++ SS +KELVENS+DA A +I I +K+ G+++ +V D+G GI
Sbjct: 8 LDEFTIGKIAAGEVVERPSSVIKELVENSIDANAKNIVIEIKDGGKQYIRVSDDGVGIP- 66
Query: 75 NNFKVRAVFLCQAYALIAK 93
+ ++ VFL + + I K
Sbjct: 67 -HAELSKVFLRHSTSKIQK 84
>gi|225027642|ref|ZP_03716834.1| hypothetical protein EUBHAL_01901 [Eubacterium hallii DSM 3353]
gi|224954956|gb|EEG36165.1| DNA mismatch repair domain protein [Eubacterium hallii DSM 3353]
Length = 731
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 101/200 (50%), Gaps = 21/200 (10%)
Query: 608 LFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLS---QSTVLNQQPL 664
L +E + ++IGQ + + + D+ LF VDQHAA EK +E+L ++ + QQ +
Sbjct: 534 LLSEEARPKHRIIGQVFRTYWLVEFDEKLFFVDQHAAHEKVMYEKLKKDLENNTIVQQMV 593
Query: 665 LRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDV 724
P+ L + +E+ + + +K GF +EE G + ++ VP + G+ D
Sbjct: 594 APPVILTFSIKEQQKFKICEESFKKLGFLIEE----FGGNEYCIRGVPAN---LLGI-DP 645
Query: 725 KDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKI 784
++L + D E S + +M T LA+ AC++++ A+ EM +
Sbjct: 646 QELFIEIFDQIEENSGKMNLEMITD----------RLATMACKAAVKGNTAMSYQEMDAL 695
Query: 785 LEHLADLNSPWNCPHGRPTM 804
++ L L++P+ CPHGRPT+
Sbjct: 696 MDQLMKLDNPYQCPHGRPTI 715
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 55/82 (67%), Gaps = 2/82 (2%)
Query: 10 PTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNG 69
P IR +++ +++I AG+V++ SS VKELVEN++DA +T++ + +K G ++ ++ DNG
Sbjct: 2 PEIRVLDQSTINQIAAGEVVERPSSIVKELVENAVDANSTAVTVEIKGGGIDFIRITDNG 61
Query: 70 CGISPNNFKVRAVFLCQAYALI 91
CGI +VR FL A + I
Sbjct: 62 CGIEKE--QVRKAFLPHATSKI 81
Score = 52.8 bits (125), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 69/148 (46%), Gaps = 19/148 (12%)
Query: 96 RFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSK 155
+F+C N + T G+ +LKD I +FG ++ L PV + V+G++ K
Sbjct: 188 KFICDNKNK-------ISTSGNGNLKDVIYNIFGRDVAMNLLPVK-GNENGILVDGYIGK 239
Query: 156 PGQGSGRNLGDRQY--FFVNDRPVDLPKVSKLVNELYKG-ANSRQYPIAIMNFIVPTRAC 212
P G+R Y +FVN R + +SK + E YKG A ++P + +
Sbjct: 240 PVISR----GNRNYENYFVNGRYLKNNIISKAIEEGYKGHAMVHKFPFTALMISMDPHCF 295
Query: 213 DVNVTPDKRKVFFSDE----CSILHALR 236
D NV P K ++ F + S++ A+R
Sbjct: 296 DANVHPAKMEMRFRNAEELYSSVMSAVR 323
>gi|431793803|ref|YP_007220708.1| DNA mismatch repair protein MutL [Desulfitobacterium
dichloroeliminans LMG P-21439]
gi|430784029|gb|AGA69312.1| DNA mismatch repair protein MutL [Desulfitobacterium
dichloroeliminans LMG P-21439]
Length = 662
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 93/195 (47%), Gaps = 22/195 (11%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQ---QPLLRPLKLDLT 673
++ IGQ +I+ + L I DQHAA E+ N+ERL + N Q LL PL ++ +
Sbjct: 474 LRPIGQVFDTYILASDGEQLVIFDQHAAHERINYERLLKEHQKNSGDCQMLLIPLPMEFS 533
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLR-FRLKAVPFSKKITFGVEDVKDLISTLA 732
P EE H ++ GF LE+ G R + L+ +P G ++D + +
Sbjct: 534 PGEEDALLEHFLLLNDMGFILEQ-----FGTRTYLLRGIPAYSGPYQGETLLRDFLEQVL 588
Query: 733 DNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLN 792
+Q S+ D + + + AC+ SI +L EM++++ L+ +
Sbjct: 589 LHQIPPSM---------DQLLEEWIYML----ACKESIKAKASLNLMEMEQLIVQLSKTD 635
Query: 793 SPWNCPHGRPTMRHL 807
SP+ CPHGRPTM L
Sbjct: 636 SPYTCPHGRPTMVQL 650
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/320 (24%), Positives = 122/320 (38%), Gaps = 91/320 (28%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ ++ ++I AG+V++ S VKEL+EN+LDAG+T IEI ++ G E +V DNG G
Sbjct: 5 IKILDTQASNQIAAGEVVERPVSVVKELIENALDAGSTQIEITIEGSGIERIRVQDNGQG 64
Query: 72 ISPNNF----------KVRAV----------FLCQAYALIAKGVRFVCTNTTGKNVKSVV 111
I K+R++ F +A IA R + + V
Sbjct: 65 IPAEELPLAVLRHATSKIRSIDDLMQLQTLGFRGEALPSIASVSRLEIISRPPAEISGRV 124
Query: 112 LKTQGSSSLK-DNIITVFGMNI------YNCLEPVAICKSDSCK---------------- 148
L+ +G L+ D+I + G I YN KS + +
Sbjct: 125 LRVEGGDQLEFDHIGSPPGTTITVDDLFYNTPARRKFLKSKNTEFGQISDVIGRLSLARP 184
Query: 149 -VEGFLSKP---------------------GQGSGRNL-------GDRQY---------- 169
V L P GQ + R L GD Q
Sbjct: 185 DVSFILKHPKVLVLQTPGRGLLLESIGAVLGQATARRLLPISCVSGDWQLKGYISPPDLV 244
Query: 170 --------FFVNDRPVDLPKVSKLVNELYKG-ANSRQYPIAIMNFIVPTRACDVNVTPDK 220
VN R + +S+ + E Y ++ YPI ++N +P DVNV P K
Sbjct: 245 RSTKQGETLIVNQRIIRSNSISRAILEGYHTLIPAKVYPIVVLNLQIPPHEYDVNVHPTK 304
Query: 221 RKVFFSDECSILHALREGLQ 240
++ F E ++ + EG++
Sbjct: 305 MEIRFHKEKELMEFIAEGVR 324
>gi|311302922|gb|ADP89035.1| PMS1-like protein [Trichomonas vaginalis]
Length = 539
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 83/169 (49%), Gaps = 18/169 (10%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLT 673
F M++IGQ+N FII K D++ +DQHAA E NFE+L + + Q L+ P+ + T
Sbjct: 389 FKDMEIIGQWNQSFIITKYGCDIYAIDQHAAMEAQNFEKLRKKCSIQSQRLISPIVISAT 448
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
P+E A ++ G+ + +++ +K +P + G +D+ +LI+ L +
Sbjct: 449 PQEISAAEECKQKCKEFGYDYDISDNSI-----HVKKIPSITTVATGSDDLLELITMLHE 503
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQ 782
+ A R +A RAC SS+ +GD + ++M+
Sbjct: 504 SP-------------ASQPMTRNARIWMAYRACHSSVRVGDTMNHSQMK 539
>gi|452205365|ref|YP_007485494.1| DNA mismatch repair protein MutL [Dehalococcoides mccartyi BTF08]
gi|452112421|gb|AGG08152.1| DNA mismatch repair protein MutL [Dehalococcoides mccartyi BTF08]
Length = 566
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 97/204 (47%), Gaps = 27/204 (13%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQ--QPLLRPLKLDLTP 674
++++GQ +++ + L+I+DQHAA E+ +E ++ T + Q LL P L+L P
Sbjct: 384 LRLVGQVGGLYLLAEGPDGLYIIDQHAAHERIRYEEIAAETCSARACQSLLEPFILELNP 443
Query: 675 EEEVVASMHMDIIRKNGFSLEEDPHALAGLR-FRLKAVPFSKKITFGVEDVKDLISTLAD 733
+E + + GF +EE G R +R+K++P K K L++ LAD
Sbjct: 444 VQEAMIEKCKSELELMGFEMEE-----FGRRVYRVKSIPAGLK----AHQAKALLAELAD 494
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNS 793
N D + +R M AC +++ G L EM+++L L
Sbjct: 495 N----------PKDAPAEIKERLIRLM----ACHTAVRAGQVLTEVEMRELLLKLEKTGI 540
Query: 794 PWNCPHGRPTMRHLVDLTTIRKNI 817
P +CPHGRPT+ +D + + K+
Sbjct: 541 PGHCPHGRPTIVK-IDFSQLEKDF 563
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 45/62 (72%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ ++K + RI AG+VI+ +S VKEL+ENSLDA A ++I ++E G + +V D+GCG
Sbjct: 3 IKLLDKATIARIAAGEVIERPASVVKELLENSLDAEAKRVDIVIREGGIGYIEVSDDGCG 62
Query: 72 IS 73
I+
Sbjct: 63 IT 64
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 91/194 (46%), Gaps = 12/194 (6%)
Query: 73 SPNNFKVRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNI 132
+P + + + +YAL V+F N G+N L T G+ L+D ++ V+G +
Sbjct: 162 TPQHEASKVTEVVVSYALAYPEVKF-SLNVDGRNT----LNTPGNGKLRDAVLEVYGSDA 216
Query: 133 YNCLEPVA--ICKSDSCKVEGFLSKPGQG-SGRNLGDRQYFFVNDRPVDLPKVSKLVNEL 189
+ + + +S + + G +S P S RN +FFVN R + + + V +
Sbjct: 217 ASKMLDLENDTYRSSAINISGLVSPPEVSRSNRN---SLHFFVNRRLIQSRALQRAVEQA 273
Query: 190 YKGA-NSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNA 248
Y G + +YP+ ++N + DVN+ P K +V FSDE ++ +++ ++ +
Sbjct: 274 YSGLLTAGRYPMGVINIRLSGALVDVNIHPTKAEVKFSDESAVFTSVQRAVRSVLVEKPP 333
Query: 249 SYSVNKVEQLIEPE 262
V + + +PE
Sbjct: 334 LLHVEEARPVYQPE 347
>gi|381210065|ref|ZP_09917136.1| DNA mismatch repair protein [Lentibacillus sp. Grbi]
Length = 617
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 97/223 (43%), Gaps = 21/223 (9%)
Query: 588 PENEERKARALAAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEK 647
P+N A T + E R+E M IGQ + +I+ + + +++DQHAA E+
Sbjct: 400 PDNNSADPVDAAIVTEQGETSTRRERVPVMYPIGQLHGTYILAQNENGFYMIDQHAAQER 459
Query: 648 YNFERLSQ---STVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGL 704
FER + T Q LL PL D + +E + HM + K G E
Sbjct: 460 IKFERFRKKLGQTANELQELLIPLTFDFSKQESIFIDHHMKELEKVGLFFE----PFGNQ 515
Query: 705 RFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASR 764
+ +++ P F E ++++I + Q E + + D A A
Sbjct: 516 TYIIRSHPNWFPKGFEEEVIREMIEQIM--QHEKVDVEMIREDAA------------ALM 561
Query: 765 ACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHL 807
+C+ SI L +++M ++LE L + P+ CPHGRP + H
Sbjct: 562 SCKRSIKANHHLNQDDMFRLLEDLRKSSDPFTCPHGRPVIIHF 604
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 18 GVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNF 77
+ ++I AG+V++ +S VKEL+ENS+DA ++ I++ ++E G + +V DNG G+ +
Sbjct: 9 ALANKIAAGEVVERPASVVKELIENSIDANSSWIKVEVEEAGLQKIKVTDNGNGMPEAD- 67
Query: 78 KVRAVFLCQAYALIAKGVRFVCTNTTG 104
FL A + I NT G
Sbjct: 68 -AEKAFLRHATSKIKDETDLFRVNTLG 93
Score = 45.4 bits (106), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 100/231 (43%), Gaps = 33/231 (14%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICK 143
L AL +RF + GK + T G+ + I V+GM++ + PV
Sbjct: 172 LLNRLALSHPSIRFEVVHN-GKQL----FNTAGTGDMLQVISQVYGMSVARKMLPVKHET 226
Query: 144 SDSCKVEGFLSKPGQGSGRNLGDRQYF--FVNDRPVDLPKVSKLVNELYKGANSR----Q 197
D +EG+++KP R Y VN R + K +L + +G ++ +
Sbjct: 227 LD-FSIEGYIAKPEVTRA----SRNYISTIVNGRYI---KSMQLTQAIIRGYHTLLPIGR 278
Query: 198 YPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASYSVNKVEQ 257
P+ ++ + DVNV P K +V FS + ++ A+ E +Q + NAS + ++EQ
Sbjct: 279 SPLVVLAIEMDPVLVDVNVHPTKLEVRFSKDKALFTAIEETIQAAF--RNASL-IPEMEQ 335
Query: 258 LIEPEKSGPSSGAESCMFLEQLSPDGNGCIEILNEQQISK-----GNTPKT 303
PEK P S S F E + N QQ+++ G +PKT
Sbjct: 336 K-HPEKY-PKSVQNSMQFYESEPKTASWQ----NTQQVNEPSPVIGQSPKT 380
>gi|347534570|ref|YP_004841240.1| DNA mismatch repair protein mutL [Lactobacillus sanfranciscensis
TMW 1.1304]
gi|345504626|gb|AEN99308.1| DNA mismatch repair protein mutL [Lactobacillus sanfranciscensis
TMW 1.1304]
Length = 638
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 101/215 (46%), Gaps = 27/215 (12%)
Query: 612 EDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQST---VLNQQPLLRPL 668
E F R++ IGQ + ++I + ++IVDQHAA E+ N+E+ + ++Q LL P+
Sbjct: 436 ERFPRLRFIGQVHGTYLIAESHDGMYIVDQHAAQERINYEKFRKQVGEISTDEQNLLVPI 495
Query: 669 KLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVED--VKD 726
LD + + D++ G LE P R F K G E+ +++
Sbjct: 496 VLDYPASDAMAIKGRFDLLESVGIKLE--PFGNNSFVIRQHPTWFEK----GQEEKTIRE 549
Query: 727 LISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILE 786
+I + N K+ TA R +A + + +C+ +I L + Q +L+
Sbjct: 550 MIDWVLKND---------KLSTASF----REQAAIMT-SCKQAIKANHHLDHKQAQALLD 595
Query: 787 HLADLNSPWNCPHGRPTMRHL--VDLTTIRKNIDE 819
+L +P+NCPHGRP + H DL T+ K I +
Sbjct: 596 NLHKCENPFNCPHGRPVLIHFSPSDLQTMFKRIQD 630
Score = 59.3 bits (142), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 43/58 (74%)
Query: 22 RICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFKV 79
+I AG+VI+ +S VKELVENS+DAG++ I++ + E G + ++ DNG GI+P+ ++
Sbjct: 14 QISAGEVIERPASVVKELVENSIDAGSSRIDVEITEAGLKQIKITDNGSGIAPDQVQL 71
>gi|358052772|ref|ZP_09146595.1| DNA mismatch repair protein [Staphylococcus simiae CCM 7213]
gi|357257745|gb|EHJ07979.1| DNA mismatch repair protein [Staphylococcus simiae CCM 7213]
Length = 646
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 95/191 (49%), Gaps = 21/191 (10%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADE--KYNFERLSQSTVLNQ-QPLLRPLKLDLT 673
M+VIGQ + +II + +Q ++++DQHAA E KY + R V N+ Q LL PL +
Sbjct: 458 MEVIGQVHGTYIIAQNEQGMYMIDQHAAQERIKYEYFRDKIGQVTNEVQDLLIPLTFHFS 517
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
+E+ + + +++ G +LE G + + + P + F ++V+D+I + +
Sbjct: 518 KDEQFIIDQYQSELQRVGINLEH----FGGHDYIVNSYP----VWFPKDEVEDIIKDMIE 569
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNS 793
E I+ KM ++ S C+ SI L ++EM +++ L +
Sbjct: 570 LVLEHKKINVAKMREDAAIMMS----------CKKSIKANHYLQQHEMSDLIDQLREAED 619
Query: 794 PWNCPHGRPTM 804
P+ CPHGRP +
Sbjct: 620 PFTCPHGRPII 630
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 44/61 (72%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ + + ++I AG+V++ SS VKEL+EN++DAG+T I I +++ G + +VVDNG G
Sbjct: 4 IKELQTSLANKIAAGEVVERPSSVVKELLENAIDAGSTEINIEVEQSGVQSIRVVDNGSG 63
Query: 72 I 72
I
Sbjct: 64 I 64
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 74/158 (46%), Gaps = 13/158 (8%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYF 170
+L T GS + + ++GM + L ++ SD +EGF++KP ++ Y
Sbjct: 195 LLATNGSGKTNEVMAQIYGMRVARDLVHISGDTSD-YHLEGFVAKPEHSRS----NKHYI 249
Query: 171 --FVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSD 227
F+N R + ++K + E Y + +YPI +N + DVNV P K +V S
Sbjct: 250 SIFINGRYIKNFMLNKAILEGYHTLLTIGRYPICYINIEMDPILVDVNVHPTKLEVRLSK 309
Query: 228 ECS----ILHALREGLQE-IYSPNNASYSVNKVEQLIE 260
E I+ +RE ++ I P N ++K +++E
Sbjct: 310 EDQLFDLIVTKIREAFKDKILIPQNDLDKISKKNKVLE 347
>gi|336253507|ref|YP_004596614.1| DNA mismatch repair protein mutL [Halopiger xanaduensis SH-6]
gi|335337496|gb|AEH36735.1| DNA mismatch repair protein mutL [Halopiger xanaduensis SH-6]
Length = 737
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 95/191 (49%), Gaps = 18/191 (9%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLN--QQPLLRPLKLDLTP 674
++V+GQF+ +++ + L +VDQHAADE+ N+ERL + + Q L P++L+LT
Sbjct: 541 LRVLGQFDDTYLVCETPDGLALVDQHAADERVNYERLRDAFADDPAAQALASPVELELTA 600
Query: 675 EEEVVASMHMDIIRKNGFSLEE-DPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
E + + D + + GF + D +A + VP + T E+++D++++ +
Sbjct: 601 AEAEAFAGYEDALERLGFYADRVDDRTIA-----VTTVPAVLEETLEPENLRDVLTSFIE 655
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNS 793
E +T D++ L AC S+ +L + +L L D +
Sbjct: 656 GDREAG------AETVDALADE----FLGDLACYPSLTGNTSLTEGSVVDLLSRLDDCEN 705
Query: 794 PWNCPHGRPTM 804
P++CPHGRP +
Sbjct: 706 PYSCPHGRPVI 716
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 47/68 (69%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR +++ V RI AG+V++ +SAVKELVENSLDA A +++ ++E G E +V D+G G
Sbjct: 7 IRRLDEDTVARIAAGEVVERPASAVKELVENSLDADANRVDVTVEEGGTELIRVADDGRG 66
Query: 72 ISPNNFKV 79
++ + +
Sbjct: 67 MNEADLRA 74
Score = 47.0 bits (110), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 58/133 (43%), Gaps = 20/133 (15%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSD-----SCKVEGFLSKPGQGSGRNLG 165
V T G L+ +++V+G + + + V + + V G +S P N
Sbjct: 201 VFATTGQGDLQAAVLSVYGREVASSMIRVEADEDELPPGPVDAVSGLVSHPET----NRS 256
Query: 166 DRQYF--FVNDRPVDLPKVSKLVNELYKGANSRQ-----YPIAIMNFIVPTRACDVNVTP 218
R+Y +VN R V + + E GA Q YP ++ VP A DVNV P
Sbjct: 257 SREYLATYVNGRAV----TADAIREGIMGAYGTQLGGDRYPFVVLFLEVPGDAVDVNVHP 312
Query: 219 DKRKVFFSDECSI 231
KR+V F D+ ++
Sbjct: 313 RKREVRFDDDDAV 325
>gi|147669646|ref|YP_001214464.1| DNA mismatch repair protein MutL [Dehalococcoides sp. BAV1]
gi|146270594|gb|ABQ17586.1| DNA mismatch repair protein MutL [Dehalococcoides sp. BAV1]
Length = 566
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 97/204 (47%), Gaps = 27/204 (13%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQ--QPLLRPLKLDLTP 674
++++GQ +++ + L+I+DQHAA E+ +E ++ T + Q LL P L+L P
Sbjct: 384 LRLVGQVGGLYLLAEGPDGLYIIDQHAAHERIRYEEIAAETCSARACQSLLEPFILELNP 443
Query: 675 EEEVVASMHMDIIRKNGFSLEEDPHALAGLR-FRLKAVPFSKKITFGVEDVKDLISTLAD 733
+E + + GF +EE G R +R+K++P K K L++ LAD
Sbjct: 444 VQEAMIEKCKSELELMGFEMEE-----FGRRVYRVKSIPAGLK----AHQAKALLAELAD 494
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNS 793
N D + +R M AC +++ G L EM+++L L
Sbjct: 495 N----------PKDAPAEIKERLIRLM----ACHTAVRAGQVLTEVEMRELLLKLEKTGI 540
Query: 794 PWNCPHGRPTMRHLVDLTTIRKNI 817
P +CPHGRPT+ +D + + K+
Sbjct: 541 PGHCPHGRPTIVK-IDFSQLEKDF 563
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 45/62 (72%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ ++K + RI AG+VI+ +S VKEL+ENSLDA A ++I ++E G + +V D+GCG
Sbjct: 3 IKLLDKATIARIAAGEVIERPASVVKELLENSLDAEAKRVDIVIREGGIGYIEVSDDGCG 62
Query: 72 IS 73
I+
Sbjct: 63 IT 64
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 91/194 (46%), Gaps = 12/194 (6%)
Query: 73 SPNNFKVRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNI 132
+P + + + +YAL V+F N G+N L T G+ L+D ++ V+G +
Sbjct: 162 TPQHEASKVTEVVVSYALAYPEVKF-SLNVDGRNT----LNTPGNGKLRDAVLEVYGSDA 216
Query: 133 YNCLEPVA--ICKSDSCKVEGFLSKPGQG-SGRNLGDRQYFFVNDRPVDLPKVSKLVNEL 189
+ + + +S + + G +S P S RN +FFVN R + + + V +
Sbjct: 217 ASKMLDLENDTYRSSAINISGLVSPPEVSRSNRN---SLHFFVNRRLIQSRALQRAVEQA 273
Query: 190 YKGA-NSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNA 248
Y G + +YP+ ++N + DVN+ P K +V FSDE ++ +++ ++ +
Sbjct: 274 YSGLLTAGRYPMGVINIRLSGALVDVNIHPTKAEVKFSDESAVFTSVQRAVRSVLVEKPP 333
Query: 249 SYSVNKVEQLIEPE 262
V + + +PE
Sbjct: 334 LLHVEEARPVYQPE 347
>gi|448435142|ref|ZP_21586686.1| DNA mismatch repair protein MutL [Halorubrum tebenquichense DSM
14210]
gi|445684257|gb|ELZ36640.1| DNA mismatch repair protein MutL [Halorubrum tebenquichense DSM
14210]
Length = 780
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 97/217 (44%), Gaps = 21/217 (9%)
Query: 594 KARALAAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERL 653
+ R L T ER F + ++++GQ + +++ + L ++DQHAADE+ N+ERL
Sbjct: 560 RQRTLDGEATGSEREF--DSLPSLRILGQLHETYVVAEAPDGLVLIDQHAADERVNYERL 617
Query: 654 SQ--STVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLR-FRLKA 710
+ + Q L P++++LT E + +D + GF E AG R + A
Sbjct: 618 KAVFADGADAQALAEPVRIELTAREAALFEEFVDDLTGIGFRAER-----AGDREVAVTA 672
Query: 711 VPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSI 770
VP + ++D +S L D+ D V +LA AC S+
Sbjct: 673 VPAVFDAALDPDLLRDALSALVDDAA-----------AGDEPVTDAVDELLADLACYPSV 721
Query: 771 MIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHL 807
+L + +L+ L +P+ CPHGRP + L
Sbjct: 722 TGNTSLTEGRVVDLLDRLDGCENPYACPHGRPVVIRL 758
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 46/70 (65%)
Query: 10 PTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNG 69
P I +++ V RI AG+V++ +S VKELVENSLDAGA+ + ++++ G E +V D+G
Sbjct: 4 PDIERLDERTVQRIAAGEVVERPASVVKELVENSLDAGASRVAVSVEAGGTEGIRVRDDG 63
Query: 70 CGISPNNFKV 79
GI + +
Sbjct: 64 VGIPADQLEA 73
Score = 43.5 bits (101), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 61/149 (40%), Gaps = 20/149 (13%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDS-----------------CKVEGFL 153
T+G+ L+ ++ V+G + + V D +V G +
Sbjct: 199 TFATEGNGDLRSAVLAVYGREVAESMIDVDWTPEDGEDANGDGTGAPAGDPPVDRVTGLV 258
Query: 154 SKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGA-NSRQYPIAIMNFIVPTRAC 212
S P + R+ D +VN R V + + + Y G +YP A++ VP
Sbjct: 259 SHPE--TARSTRDYLATYVNGRYVTASALREATLDAYGGQLAPDRYPFAVLFVEVPAGDV 316
Query: 213 DVNVTPDKRKVFFSDECSILHALREGLQE 241
DVNV P K +V F +E ++ A+ +++
Sbjct: 317 DVNVHPRKLEVRFDEEPAVRSAVEAAVED 345
>gi|354557460|ref|ZP_08976718.1| DNA mismatch repair protein mutL [Desulfitobacterium
metallireducens DSM 15288]
gi|353550254|gb|EHC19691.1| DNA mismatch repair protein mutL [Desulfitobacterium
metallireducens DSM 15288]
Length = 633
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 90/191 (47%), Gaps = 20/191 (10%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLN---QQPLLRPLKLDLT 673
++ +GQ +I+ D+ L I+DQHAA E+ N+ER+ + N Q LL P +D +
Sbjct: 445 LRPLGQILGTYILASNDESLVIMDQHAAHERINYERILKEHQHNPGASQTLLIPTSIDFS 504
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
P EE ++ + GF LE G + ++ VP G E ++ + +
Sbjct: 505 PIEEQALLENLPHLTNMGFILEH----FGGRTYLIRGVPAYSGPYSGEELLRQFLEEVVF 560
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNS 793
Q + + D + +R + AC+ SI + L EMQ++L L+ +
Sbjct: 561 KQNQPAF---------DEL----LREWIYMLACKESIKAKEKLSLLEMQELLVQLSKTEN 607
Query: 794 PWNCPHGRPTM 804
P+ CPHGRPT+
Sbjct: 608 PYTCPHGRPTI 618
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 68/136 (50%), Gaps = 4/136 (2%)
Query: 103 TGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGR 162
T K+ K VV +T G L ++I ++G + L P++ C +EG++S P R
Sbjct: 189 TLKHPKQVVFQTPGRGKLLESIGVIYGQKLARQLIPLS-CSYKEWTLEGYISPPD--LVR 245
Query: 163 NLGDRQYFFVNDRPVDLPKVSKLVNELYKG-ANSRQYPIAIMNFIVPTRACDVNVTPDKR 221
+ + F VN R + +S+ ++E Y +R +PI ++ +P DVNV P K
Sbjct: 246 STRQEEIFIVNGRIIRSKLLSRAISEGYHTLIPNRLFPIIVIQLTLPPHEYDVNVHPTKM 305
Query: 222 KVFFSDECSILHALRE 237
++ F +E ++ + E
Sbjct: 306 EIRFQNEKALAQFISE 321
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 38/56 (67%)
Query: 22 RICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNF 77
+I AG+V++ S VKELVENSLDAGA IEI ++ G +V D+G GISP +
Sbjct: 15 QIAAGEVVERPVSVVKELVENSLDAGAKQIEITIEGNGVPLIRVRDDGSGISPEDL 70
>gi|426356476|ref|XP_004045593.1| PREDICTED: putative postmeiotic segregation increased 2-like
protein 1-like, partial [Gorilla gorilla gorilla]
Length = 219
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 47/59 (79%)
Query: 20 VHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFK 78
VH+IC GQV+ LS+AVKELVENSLDAGAT+I++ LK+YG + +V NGCG+ NF+
Sbjct: 2 VHQICFGQVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSGNGCGVEEENFE 60
>gi|126179894|ref|YP_001047859.1| DNA mismatch repair protein [Methanoculleus marisnigri JR1]
gi|166232097|sp|A3CWX7.1|MUTL_METMJ RecName: Full=DNA mismatch repair protein MutL
gi|125862688|gb|ABN57877.1| DNA mismatch repair protein MutL [Methanoculleus marisnigri JR1]
Length = 585
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 91/191 (47%), Gaps = 21/191 (10%)
Query: 617 MKVIGQFNLGFIIGK-LDQDLFIVDQHAADEKYNFERLSQS--TVLNQQPLLRPLKLDLT 673
M+ IGQ +I+ + D L++VDQHAA E+ ++++++ Q L+ P+ L L
Sbjct: 398 MEPIGQVAATYIVAEGADGTLYLVDQHAAHERVLYDQVTEQRDKAAGSQELITPVVLSLP 457
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
P+E + ++ GF ++E F ++AVP + VED + T+AD
Sbjct: 458 PKESAALRDAIPLLADEGFVVDE----FGRDTFAVRAVPAALG---AVEDPGTVRETIAD 510
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNS 793
+ S P R + ACR ++ G L ++ ++++ LA +
Sbjct: 511 LLADES-----------RTAPDRRERVTCIVACRGAVKAGALLTPDQQKRLIMQLARTKT 559
Query: 794 PWNCPHGRPTM 804
PW CPHGRPT+
Sbjct: 560 PWTCPHGRPTV 570
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 70/151 (46%), Gaps = 6/151 (3%)
Query: 112 LKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFF 171
+ TQ S + I ++G ++ L PV + + G++S+P + G +
Sbjct: 201 MATQRSGGALNTIAGLYGADLARSLVPVE-GRLPFLAIRGYISRPSESRGNP--SQISVS 257
Query: 172 VNDRPVDLPKVSKLVNELYKGANSR-QYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECS 230
+N R + +++ V E Y + +YP+A ++ + T DVNV P KR++ S E
Sbjct: 258 INGRSIASRQIAAAVREGYGTLLPKDRYPVAFLDLAIDTGLVDVNVHPTKREIRLSRERE 317
Query: 231 ILHALREGLQEIYSPNNASYS--VNKVEQLI 259
I A+ + E + ++ + V V+Q I
Sbjct: 318 ITGAIAAAVDEALAGHDLARETPVEPVQQQI 348
Score = 45.4 bits (106), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 42/65 (64%), Gaps = 2/65 (3%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKE--YGEEWFQVVDNG 69
IR ++ V++I AG+V++ +S VKEL+EN++DA +TSI I + +V DNG
Sbjct: 4 IRVLDPDTVNQIAAGEVVERPASVVKELLENAIDADSTSILIDVSSDMAAITKIRVTDNG 63
Query: 70 CGISP 74
G++P
Sbjct: 64 EGMTP 68
>gi|224542101|ref|ZP_03682640.1| hypothetical protein CATMIT_01276 [Catenibacterium mitsuokai DSM
15897]
gi|224525034|gb|EEF94139.1| DNA mismatch repair domain protein [Catenibacterium mitsuokai DSM
15897]
Length = 592
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 98/195 (50%), Gaps = 27/195 (13%)
Query: 616 RMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTV---LNQQPLLRPLKLDL 672
++KVIGQ +I+G+ ++ +I+DQHAA E+ N+E L+ QP++ PL +
Sbjct: 402 KIKVIGQTRGTYILGENERGFYIIDQHAAQERINYEYFLNKFSHPDLSIQPMIVPLTFEY 461
Query: 673 TPEEEVVASMHMDIIRKNGFSLE---EDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIS 729
E +V H +++ + G LE + + GL +K + +KI + ++I
Sbjct: 462 PESECLVIDEHKELLEEVGIHLESFGRHSYIVRGLPLWMKNI--DEKIF-----IDEMIQ 514
Query: 730 TLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLA 789
+ +NQ + D V +A+ AC++S+ L +MQ I+++L
Sbjct: 515 EVLNNQ------------SVDIVAMQE--HAIATLACKASVKGNTYLTTQDMQTIVDNLM 560
Query: 790 DLNSPWNCPHGRPTM 804
++P+ CPHGRPT+
Sbjct: 561 RCDNPYVCPHGRPTI 575
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 42/62 (67%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR +++ + ++I AG+V++ +S +KEL ENS+DA A I I +++ G V+D+G G
Sbjct: 4 IRQLSENLANKIAAGEVVERPASVIKELTENSIDAKAKRITILVEQGGTSSMSVIDDGIG 63
Query: 72 IS 73
++
Sbjct: 64 MN 65
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 60/120 (50%), Gaps = 4/120 (3%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYF 170
+ KT G ++L + I ++G+ + + V ++ V G++SK + R+ +
Sbjct: 194 IFKTNGRNNLLEVISEIYGLPVAKNMIHVDFG-NEEFHVSGYISK--IDTSRSSKNHIVT 250
Query: 171 FVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDEC 229
VN R V K +NE+Y+ + +++PIAI+ V DVNV P K +V FS E
Sbjct: 251 LVNHRYVKNMKTINTINEVYRRYLADKRFPIAILEIDVDPYLVDVNVHPAKLEVRFSKET 310
>gi|114566509|ref|YP_753663.1| DNA mismatch repair ATPase [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
gi|122318426|sp|Q0AYB2.1|MUTL_SYNWW RecName: Full=DNA mismatch repair protein MutL
gi|114337444|gb|ABI68292.1| DNA mismatch repair protein MutL [Syntrophomonas wolfei subsp.
wolfei str. Goettingen]
Length = 584
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 69/131 (52%), Gaps = 4/131 (3%)
Query: 106 NVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLG 165
N K + +T G+ SL D +I +FG + L PV + S + G +S PG
Sbjct: 189 NEKRQLFRTPGNGSLNDAVIAIFGRDFLEPLIPVK-WEGLSLSISGLISPPGVAKMNR-- 245
Query: 166 DRQYFFVNDRPVDLPKVSKLVNELYKGAN-SRQYPIAIMNFIVPTRACDVNVTPDKRKVF 224
RQ FVN RP+ P + + ++E Y+G +R+ P+ I+ VP + DVNV P K ++
Sbjct: 246 KRQLIFVNQRPIRSPLLYRALDEGYRGLLLAREQPLVILQIAVPPDSIDVNVHPQKSEIR 305
Query: 225 FSDECSILHAL 235
F DE SI +L
Sbjct: 306 FRDEQSIFRSL 316
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 93/197 (47%), Gaps = 31/197 (15%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQ---QPLLRPLKL 670
+ K++GQ +I+ + +Q L IVDQHAA E+ + RL Q ++ Q L PL +
Sbjct: 399 YDEFKILGQLWDSYILLEKEQTLNIVDQHAAHERIIYSRLQQFYAASRGEMQMLAFPLLM 458
Query: 671 DLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLR-FRLKAVPFSKKITFGVED--VKDL 727
DL+ + + + +I+ + GF L++ AG R L+ P I G E + ++
Sbjct: 459 DLSLRDMELLEKNQEILGELGFDLQQ-----AGPRSIFLRGTP---AIIAGQEREVLFEI 510
Query: 728 ISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEH 787
+ LA QG ++ + + AC+ ++ G L EM +I++
Sbjct: 511 LELLAGGQG---------INLKNEA--------IIKMACKKAVKAGTRLDYREMMQIIQE 553
Query: 788 LADLNSPWNCPHGRPTM 804
L + NCPHGRPT+
Sbjct: 554 LFITDDYKNCPHGRPTI 570
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 43/63 (68%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
I+ +N V+++I AG+VI+ +S VKEL+EN++DA + +I + + G + +V D+G
Sbjct: 2 AIKLLNDNVINKIAAGEVIERPASVVKELLENAIDAASRNIAVKISGAGLDSIEVTDDGE 61
Query: 71 GIS 73
GIS
Sbjct: 62 GIS 64
>gi|164688071|ref|ZP_02212099.1| hypothetical protein CLOBAR_01716 [Clostridium bartlettii DSM
16795]
gi|164602484|gb|EDQ95949.1| DNA mismatch repair domain protein [Clostridium bartlettii DSM
16795]
Length = 687
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 97/201 (48%), Gaps = 30/201 (14%)
Query: 609 FRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLS---QSTVLNQQPLL 665
FR DF KVIG +I+ + ++++DQHAA EK +E ++ ++ Q LL
Sbjct: 496 FRASDF---KVIGTILNTYIVLEKGTSMYLLDQHAAHEKVLYEEYMTKFKNQNIDMQMLL 552
Query: 666 RPLKLDLTPEEEVVASMHMDIIRKNGFSLE--EDPHALAGLRFRLKAVPFSKKITFGVED 723
P+ ++L+ + + ++++ K GF +E D H + ++ VP FGV
Sbjct: 553 DPIVIELSSVDMLDVEKNLNLFMKFGFEIEIFGDNHIM------VRGVPN----IFGVAQ 602
Query: 724 VKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQK 783
+ I + DN G+ KMD +AS +CR++I D + +E+
Sbjct: 603 SEKFIFQIIDNIGDLESSYDLKMDK------------IASMSCRAAIKANDKIHFDEINS 650
Query: 784 ILEHLADLNSPWNCPHGRPTM 804
+L + +P+ CPHGRP+M
Sbjct: 651 LLSKMEKCENPYTCPHGRPSM 671
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 40/53 (75%)
Query: 20 VHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGI 72
+++I AG+V++ SS VKEL+EN++D+GAT + + + + G++ ++ DNG GI
Sbjct: 13 INKIAAGEVVERPSSVVKELLENAIDSGATQVVVDITDGGKKCIKISDNGEGI 65
Score = 40.8 bits (94), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 77/177 (43%), Gaps = 24/177 (13%)
Query: 79 VRAVFLCQAYA-------LIAK------GVRFVCTNTTGKNVKSVVLKTQGSSSLKDNII 125
VRA FL +A LI K VR N + ++L T G + L I
Sbjct: 157 VRAKFLKSTHAETINISDLINKLAIGNPNVRLKYINNS-----KLMLNTPGDNKLISVIR 211
Query: 126 TVFGMNIYNCLEPVAICKSDSCKVEGFLSKPG-QGSGRNLGDRQYFFVNDRPVDLPKVSK 184
+++G I + L V + + K+ G++ S +NL Q+ ++N R V +
Sbjct: 212 SIYGKEITDNLIEVD-YEDEKIKISGYIGNNNIYRSNKNL---QHIYINKRFVKSKVILD 267
Query: 185 LVNELYKGANS-RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQ 240
+NE YK ++ + +N + DVN+ P K +V F DE + +R+ ++
Sbjct: 268 AINESYKSIIPINKFGVCFLNIKINPSEIDVNIHPTKLEVKFQDEKEVYIKIRDVIK 324
>gi|74706071|sp|O95744.1|PM2P2_HUMAN RecName: Full=Putative postmeiotic segregation increased 2-like
protein 2; AltName: Full=Postmeiotic segregation
increased 2-like protein 14; AltName: Full=Postmeiotic
segregation increased protein 4; AltName: Full=Putative
postmeiotic segregation increased 2 pseudogene 2
gi|4239952|dbj|BAA74754.1| PMS2L14 [Homo sapiens]
Length = 297
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 52/67 (77%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+PI++ VH+IC+G V+ LS+AVK++V NSLDAGAT+I++ LK+YG + +V NGCG
Sbjct: 77 IKPIDRKSVHQICSGPVVLSLSTAVKKIVGNSLDAGATNIDLKLKDYGMDLIEVSGNGCG 136
Query: 72 ISPNNFK 78
+ NF+
Sbjct: 137 VEEENFE 143
>gi|423089221|ref|ZP_17077583.1| DNA mismatch repair protein [Clostridium difficile 70-100-2010]
gi|357558357|gb|EHJ39851.1| DNA mismatch repair protein [Clostridium difficile 70-100-2010]
Length = 655
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 93/197 (47%), Gaps = 28/197 (14%)
Query: 616 RMKVIGQFNLG-----FIIGKLDQDLFIVDQHAADEKYNFERLSQSTV---LNQQPLLRP 667
+ + G F +G +II D ++++DQHAA E+ +ER + +N Q LL P
Sbjct: 463 KFSLYGYFVIGVVFNTYIILSKDDSMYLLDQHAAHERILYERYMEKFYRQDINMQILLDP 522
Query: 668 LKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDL 727
+ ++++ + + ++++ K GF LE ++ VP FGV + +
Sbjct: 523 VVIEVSNIDMLQIENNLELFMKFGFELE----IFGNNHIMVRCVP----TIFGVPETEKF 574
Query: 728 ISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEH 787
I + DN E I S+Y + AS ACRS+I D + E++ +LE
Sbjct: 575 ILQIIDNIEE--ITSNYDLKGE----------RFASMACRSAIKANDKIYDIEIKSLLEQ 622
Query: 788 LADLNSPWNCPHGRPTM 804
L +P+ CPHGRP M
Sbjct: 623 LEKCENPFTCPHGRPIM 639
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 66/126 (52%), Gaps = 24/126 (19%)
Query: 20 VHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFKV 79
+++I AG+V++ SS VKEL+ENS+DAGA I I + + G+ ++ DNG GI + +V
Sbjct: 13 INKIAAGEVVERPSSVVKELIENSIDAGANKISIDIIDGGKSLIKITDNGIGIPSS--EV 70
Query: 80 RAVFLCQA----------YALIAKGVRFVCTNTTGKNVKSV--VLKTQGSSSLKDNIITV 127
FL A Y L + G R G+ + S+ V K + ++ KD II
Sbjct: 71 EKSFLRHATSKIKKIDDLYDLYSLGFR-------GEALASISAVSKLEMTTKTKDEII-- 121
Query: 128 FGMNIY 133
G IY
Sbjct: 122 -GTKIY 126
>gi|448589692|ref|ZP_21649851.1| DNA mismatch repair protein MutL [Haloferax elongans ATCC BAA-1513]
gi|445736120|gb|ELZ87668.1| DNA mismatch repair protein MutL [Haloferax elongans ATCC BAA-1513]
Length = 753
Score = 79.7 bits (195), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 90/192 (46%), Gaps = 20/192 (10%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLN--QQPLLRPLKLDLTP 674
M+++GQ +I+ + + L +VDQHAADE+ N+ERL + Q L P++L+LT
Sbjct: 552 MRILGQLLDTYIVAETSEGLVLVDQHAADERVNYERLKAEVEGDTPTQALADPVELELTA 611
Query: 675 EEEVVASMHMDIIRKNGFSLEEDPHA-LAGLR-FRLKAVPFSKKITFGVEDVKDLISTLA 732
E + + + + + GF HA G R ++ VP E V+D ++
Sbjct: 612 REAALFEEYREAVAQVGF------HAGRTGERTVTVRTVPAVFDAALDPELVRDALTAFV 665
Query: 733 DNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLN 792
++ E T D+V +LA AC SI +L + +L L D
Sbjct: 666 QDESEGG------QQTVDAVADE----LLADLACYPSITGNTSLREGSVLDLLSALDDCE 715
Query: 793 SPWNCPHGRPTM 804
+P+ CPHGRP +
Sbjct: 716 NPYACPHGRPVI 727
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 66/132 (50%), Gaps = 4/132 (3%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYF 170
V T+G L I++V+G + + PV +D V G +S P + R+ D
Sbjct: 197 VFATEGRGDLASTILSVYGREVAEAMVPVEYDSAD-VSVSGLVSHPE--TTRSTRDYLST 253
Query: 171 FVNDRPVDLPKVSKLVNELYKGA-NSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDEC 229
FVNDR V + + V + Y G ++ +YP AI+ V A DVNV P K +V F DE
Sbjct: 254 FVNDRYVTARVLREAVLDAYGGQLDADRYPFAILFVDVAPDAVDVNVHPRKMEVRFDDET 313
Query: 230 SILHALREGLQE 241
+ A+ + +++
Sbjct: 314 QVRQAVTDAVED 325
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 43/65 (66%)
Query: 15 INKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISP 74
+++ + RI AG+V++ +S VKELVENSLDA AT + +A+ G E ++ D+G G+S
Sbjct: 7 LDEKTIQRIAAGEVVERPASVVKELVENSLDADATRVSVAVDAGGVEGVRIRDDGVGMSE 66
Query: 75 NNFKV 79
++
Sbjct: 67 EELEL 71
>gi|311302914|gb|ADP89031.1| PMS1-like protein [Trichomonas vaginalis]
Length = 539
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 84/169 (49%), Gaps = 18/169 (10%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLT 673
F M++IGQ+N FII K D++ +DQHAA E NFE+L + + Q L+ P+ + T
Sbjct: 389 FKDMEIIGQWNQSFIITKYGCDIYAIDQHAAMEAQNFEKLRKKCSIQSQRLISPIVISAT 448
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
P+E A ++ G+ + +++ +K +P + G +D+ +LI+ L +
Sbjct: 449 PQEISAAEDCKQKCKEFGYDYDISDNSIL-----VKKIPSITTVATGSDDLLELITMLHE 503
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQ 782
+ A + R +A RAC SS+ +GD + ++M+
Sbjct: 504 SP-------------ASQPMTRKARIWMAYRACHSSVRVGDTMNNSQMK 539
>gi|238916922|ref|YP_002930439.1| DNA mismatch repair protein MutL [Eubacterium eligens ATCC 27750]
gi|238872282|gb|ACR71992.1| DNA mismatch repair protein MutL [Eubacterium eligens ATCC 27750]
Length = 625
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 91/192 (47%), Gaps = 21/192 (10%)
Query: 616 RMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLS---QSTVLNQQPLLRPLKLDL 672
+ ++IGQ + + + + +++DQHAA EK +ER + + Q +L P+ L L
Sbjct: 436 KYRIIGQLFDTYWLIEFEDKFYMMDQHAAHEKVLYERTMNKLHNKTIGTQMILPPIVLSL 495
Query: 673 TPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLA 732
EE + + DI ++ G+ +EE G +++ +P D K L+ +
Sbjct: 496 NMHEEEIYKTNQDIFKRLGYEIEE----FGGNEYKVTGIPAG----LPKMDYKQLLIDVL 547
Query: 733 DNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLN 792
D E S P + +AS +C++++ + L NE ++++ L
Sbjct: 548 DGLSEESAGKD----------PDIITEKVASMSCKAAVKGNNRLSFNEAFELMDELMKAE 597
Query: 793 SPWNCPHGRPTM 804
+P+NCPHGRPT+
Sbjct: 598 NPYNCPHGRPTL 609
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 49/68 (72%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I +++ +++I AG+V++ SS VKELVEN++DAGAT+I + +KE G + +V DNG G
Sbjct: 3 ITLLDQNTINKIAAGEVVERPSSVVKELVENAIDAGATAITVEIKEGGISFIRVTDNGSG 62
Query: 72 ISPNNFKV 79
I+ + ++
Sbjct: 63 INKDEIEI 70
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 66/135 (48%), Gaps = 15/135 (11%)
Query: 96 RFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSK 155
RF+ N L T G+ +LKD I V+G +I N L ++ KS + GF+ K
Sbjct: 187 RFISNNQNK-------LHTSGNMNLKDIIYNVYGRDITNNLYEIS-GKSQDIEASGFIGK 238
Query: 156 PGQGSGRNLGDRQY--FFVNDRPVDLPKVSKLVNELYKG-ANSRQYPIAIMNFIVPTRAC 212
P G +R Y +++N R + ++K + + YKG YP + ++F +
Sbjct: 239 PMVVRG----NRTYENYYINGRYIKSSIITKAIEDAYKGFIMPHNYPFSAIHFKINPAII 294
Query: 213 DVNVTPDKRKVFFSD 227
DVNV P K ++ FS+
Sbjct: 295 DVNVHPTKMELRFSN 309
>gi|255306972|ref|ZP_05351143.1| DNA mismatch repair protein [Clostridium difficile ATCC 43255]
Length = 655
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 90/189 (47%), Gaps = 23/189 (12%)
Query: 619 VIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTV---LNQQPLLRPLKLDLTPE 675
VIG +II D ++++DQHAA E+ +ER + +N Q LL P+ ++++
Sbjct: 471 VIGVVFNTYIILSKDDSMYLLDQHAAHERILYERYMEKFYRQDINMQILLDPVVIEVSNV 530
Query: 676 EEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQ 735
+ + ++++ K GF LE ++ VP FGV + + I + DN
Sbjct: 531 DMLQIENNLELFMKFGFELE----IFGNNHIMVRCVP----TIFGVPETEKFILQIIDNI 582
Query: 736 GECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPW 795
E I S+Y + AS ACRS+I D + E++ +LE L +P+
Sbjct: 583 EE--ITSNYDLKGE----------RFASMACRSAIKANDKIYDIEIKSLLEQLEKCENPF 630
Query: 796 NCPHGRPTM 804
CPHGRP M
Sbjct: 631 TCPHGRPIM 639
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 66/126 (52%), Gaps = 24/126 (19%)
Query: 20 VHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFKV 79
+++I AG+V++ SS VKEL+ENS+DAGA I I + + G+ ++ DNG GI + +V
Sbjct: 13 INKIAAGEVVERPSSVVKELIENSIDAGANKISIDIIDGGKSLIKITDNGIGIPSS--EV 70
Query: 80 RAVFLCQA----------YALIAKGVRFVCTNTTGKNVKSV--VLKTQGSSSLKDNIITV 127
FL A Y L + G R G+ + S+ V K + ++ KD II
Sbjct: 71 EKSFLRHATSKIKKIDDLYDLYSLGFR-------GEALASISAVSKLEMTTKTKDEII-- 121
Query: 128 FGMNIY 133
G IY
Sbjct: 122 -GTKIY 126
>gi|448728944|ref|ZP_21711264.1| DNA mismatch repair protein MutL [Halococcus saccharolyticus DSM
5350]
gi|445795992|gb|EMA46509.1| DNA mismatch repair protein MutL [Halococcus saccharolyticus DSM
5350]
Length = 554
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 87/194 (44%), Gaps = 26/194 (13%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPL-LRPLKLDL 672
F + VIGQF +++ + D DL +VDQHAA E+ NFERL ++ + + P L L
Sbjct: 364 FDTISVIGQFRGLYLLCEADDDLLVVDQHAAHERINFERLREALDDGISSVGIEPTPLSL 423
Query: 673 TPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIST-L 731
T E + + D + GF +E D G +R +P V D++ L
Sbjct: 424 TAAEAALVEANADALDALGFRIETD-----GGAYRATGLPAPLGRVAEPSAVHDVLDGFL 478
Query: 732 ADNQGECSIISSYKMDTADSVCPSRVRA-MLASRACRSSIMIGDALGRNEMQKILEHLAD 790
A ++ P R +L AC S+ G++L + +++E L
Sbjct: 479 AGDE------------------PENPREELLKDVACHPSLKAGESLSSEDATRLVERLGT 520
Query: 791 LNSPWNCPHGRPTM 804
P+ CPHGRPT+
Sbjct: 521 CEQPFACPHGRPTV 534
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 44/68 (64%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I ++ V RI AG+V+ +S V ELVENSLDAG +S+E+ ++ G + +V D+G G
Sbjct: 4 ITELDPETVERIAAGEVVTRPASVVTELVENSLDAGTSSVEVVVENAGLDLIRVADDGHG 63
Query: 72 ISPNNFKV 79
++ + ++
Sbjct: 64 MTETDARL 71
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 69/164 (42%), Gaps = 17/164 (10%)
Query: 88 YALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIY---------NCLEP 138
YAL VRF T+ G+ V L T GS S D I+ V+ + + E
Sbjct: 178 YALTHPDVRFSLTHD-GRTV----LSTPGSGSYTDAILGVYNREVAGQSTEFGQEDEKES 232
Query: 139 VAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGA-NSRQ 197
S+ V G + P R+ +N R +D P V K V Y +
Sbjct: 233 GDDQPSNGVSVSGLVVYPSIT--RSTPAHVTTAINGRALDDPTVRKAVTNGYGTLLPDDR 290
Query: 198 YPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQE 241
YPIA+++ +P DVNV P K +V F+D + A+ + + +
Sbjct: 291 YPIAVVDVSLPPERVDVNVHPSKDEVAFADPDEVAEAVEQAIAD 334
>gi|423335912|ref|ZP_17313663.1| DNA mismatch repair protein HexB [Lactobacillus reuteri ATCC 53608]
gi|337729115|emb|CCC04238.1| DNA mismatch repair protein HexB [Lactobacillus reuteri ATCC 53608]
Length = 668
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 93/199 (46%), Gaps = 21/199 (10%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQ---STVLNQQPLLRPLKL 670
F ++ IGQ F++ + L+IVDQHAA E+ N+E Q +QQ L PL L
Sbjct: 462 FPDLQYIGQLQGTFLLAQAGDGLYIVDQHAAQERINYEYYRQKIGEVSADQQNFLVPLVL 521
Query: 671 DLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIST 730
+ + + + + H+D + G LE + F L++ P K + K++I
Sbjct: 522 NYSTVDAMTINQHLDTLAAVGLELE----SFGQNSFILRSHPTWFKEGQEEDTAKEMIDW 577
Query: 731 LADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLAD 790
L N G+ ++ ++M TA M++ C+ +I L E + +L+ L
Sbjct: 578 LIKN-GKLTV-KEFRMKTA---------IMMS---CKRAIKANHHLDEREAKALLKRLPQ 623
Query: 791 LNSPWNCPHGRPTMRHLVD 809
+P+NCPHGRP H D
Sbjct: 624 CENPFNCPHGRPVTVHFND 642
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 43/62 (69%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I ++ + ++I AG+VI+ +S VKELVENSLDA + ++I ++ G + +V+D+G G
Sbjct: 4 IHELDNILANQIAAGEVIERPASIVKELVENSLDAHSHRVDIIVENSGLDSVRVIDDGDG 63
Query: 72 IS 73
I+
Sbjct: 64 IA 65
Score = 43.9 bits (102), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 79/175 (45%), Gaps = 19/175 (10%)
Query: 73 SPNNFKVRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNI 132
SP R + AL V F T+ G+ + ++ G+++L+ + ++G+
Sbjct: 163 SPQTELTRITDIINRLALANPAVAFSFTHN-GREL----FRSAGNNNLQQVVAAIYGVQA 217
Query: 133 YNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFV--NDRPVDLPKVSKLVNELY 190
+ ++ D KV GF+S P RQY + N R + + +L +
Sbjct: 218 GRKMLEIS-GADDDFKVSGFVSLPELTRA----SRQYITITINHRYI---RNFELTKAII 269
Query: 191 KGANSR----QYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQE 241
+G S+ +YPIA++N + DVNV P KR+V S E ++ + E +++
Sbjct: 270 QGYESKLMVGRYPIAVINIDLDPVLVDVNVHPAKREVRLSKEQQLMKLIAETIRK 324
>gi|336391646|ref|ZP_08573045.1| DNA mismatch repair protein [Lactobacillus coryniformis subsp.
torquens KCTC 3535]
Length = 645
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 98/214 (45%), Gaps = 23/214 (10%)
Query: 612 EDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQS---TVLNQQPLLRPL 668
E F + IGQ + +++ + + +IVDQHAA E+ N+E Q +QQ LL PL
Sbjct: 441 ERFPHLDYIGQMHGTYLLAQGEDGFYIVDQHAAQERVNYEYYRQEIGKVSTDQQSLLVPL 500
Query: 669 KLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLI 728
LD + + H D++++ G +LE A F +++ P F +D I
Sbjct: 501 VLDYPASDAIRLRDHTDLLQQLGLNLE----AFGQNSFVVRSHP----TWFKAGQEEDTI 552
Query: 729 STLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHL 788
C +I D +V R + + +C+ +I L + + +L+ L
Sbjct: 553 ---------CEMIDYILNDQKITVAKFREQTAIM-MSCKRAIKANHHLDDQQAKALLQRL 602
Query: 789 ADLNSPWNCPHGRPTMRHLV--DLTTIRKNIDEN 820
+ +P+NCPHGRP + H DL + + I E+
Sbjct: 603 PECENPFNCPHGRPVLVHFSGKDLEKMFRRIQES 636
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 62/116 (53%), Gaps = 20/116 (17%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I + + + ++I AG+VI+ +S VKELVEN+LDA +T I+I + E G + QV+DNG G
Sbjct: 4 IHELAEVLANQIAAGEVIERPASVVKELVENALDAHSTQIDIVVAEAGLKQIQVIDNGDG 63
Query: 72 ISPNN-------------------FKVRAV-FLCQAYALIAKGVRFVCTNTTGKNV 107
I+ + FKVR++ F +A IA + +TG+ V
Sbjct: 64 IAAEDVLNAFKRHATSKIHDRADLFKVRSLGFRGEALPSIASVSDMILETSTGEEV 119
>gi|427414200|ref|ZP_18904390.1| DNA mismatch repair protein MutL [Veillonella ratti
ACS-216-V-Col6b]
gi|425714576|gb|EKU77579.1| DNA mismatch repair protein MutL [Veillonella ratti
ACS-216-V-Col6b]
Length = 694
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 164/383 (42%), Gaps = 70/383 (18%)
Query: 432 AVDTRSPVRRHLVDDIAKLNKIEPFKCNKADKVSKEIENILSSE-GNTNE--KPREELVT 488
AV+ RH DIAK+N I+ K + ++ E +++ SS GNT++ P +
Sbjct: 357 AVNYDKAFTRH---DIAKINDID-IKVDGEGAINLEFDSVNSSNPGNTSQPTYPFTGVTE 412
Query: 489 Q--EKATPLLNVPSIVSSSNDLKKNSEDLSVAASHLQFSGSILDAPVPSSSLDICSTLQF 546
Q EK +N I S + K + + S SG DA +P S +
Sbjct: 413 QAREKTNEFIN--KIRSEGYEAPKRT---TYEQSSWIESGDFEDAVIPKS---------Y 458
Query: 547 SIQDLRKRRQQRLSIMQSSCH-TSGSVKMRRCFAAATLELSQPENEERKARALAAATTEL 605
+ +D + RQ ++ +S + +G + + A A+ E R+ + TT L
Sbjct: 459 TAEDKERFRQLAANLRSNSEYGEAGQAPISQNTAGAS---------ESNTRSFSVNTTGL 509
Query: 606 ERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQST-VLNQQPL 664
L GQ +I+ K +L+I+DQHAA E+ +++L +S + Q L
Sbjct: 510 LPL------------GQVAACYILAKKGDNLYIIDQHAAHERIRYDQLCKSAESIPMQEL 557
Query: 665 LRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDV 724
L +D EE ++A + + GF + + + +++ +P + G E +
Sbjct: 558 LISQYIDANEEELIIAEEQNETLLNLGFQVVQG----GPTQLKIEGMPIDLVESKGEEIL 613
Query: 725 KDLISTLADNQGECSIISSYKMDTADSVCPSRVR---AMLASRACRSSIMIGDALGRNEM 781
+ + S L D Q P++ + MLA +CR +I G L +M
Sbjct: 614 RYVFSLLKDYQ-----------------TPTKAQLRHEMLAYASCRGAIKAGHTLNTYQM 656
Query: 782 QKILEHLADLNSPWNCPHGRPTM 804
++E L + P+ CPHGRPT+
Sbjct: 657 SVLIEDLFHTDKPYVCPHGRPTI 679
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 45/62 (72%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I +++ +++I AG+V++ +S +KEL+ENSLDAGATSIE+ + G + +V DNG G
Sbjct: 4 IHVLDEVTINKIAAGEVVERPASVIKELLENSLDAGATSIEVEIANGGTTYMRVTDNGSG 63
Query: 72 IS 73
+S
Sbjct: 64 MS 65
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 75/155 (48%), Gaps = 12/155 (7%)
Query: 106 NVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLG 165
N +V + G+ +L D + ++G + + + P+ + +S+ ++G +SKP +
Sbjct: 191 NNDTVSIVVPGNGNLIDTVSALYGYKVSDDIFPI-VYESEGIHIQGVVSKPTLLKSSRI- 248
Query: 166 DRQYFFVNDRPVDLPKVSKLVNELYKGANSRQ-YPIAIMNFIVPTRACDVNVTPDKRKVF 224
Q VN+R + ++K ++ Y + YP+ ++ VP D+NV P K +V
Sbjct: 249 -WQTVVVNNRVIGDKAITKAIDNAYHALLPKGGYPLVLLTITVPPGTVDINVHPRKSEVK 307
Query: 225 FSDE--------CSILHALREGLQEIYSPNNASYS 251
F D+ +IL AL+ +Q++ N+ + S
Sbjct: 308 FEDDKPVFKAVYHAILQALQNPMQQVAGRNDVAMS 342
>gi|291536170|emb|CBL09282.1| DNA mismatch repair protein MutL [Roseburia intestinalis M50/1]
gi|291538967|emb|CBL12078.1| DNA mismatch repair protein MutL [Roseburia intestinalis XB6B4]
Length = 686
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 109/228 (47%), Gaps = 27/228 (11%)
Query: 580 AATLELSQPENEERKARALAAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIV 639
AA L S+ E+++ A++ E K+ + K+IGQ + + + + LFI+
Sbjct: 467 AAALPESKVTYEQQELAAVS------EGFLTKDAKKKHKIIGQLFDTYWMVEYEDKLFII 520
Query: 640 DQHAADEKYNFERLSQST---VLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEE 696
DQHAA EK +E+ + + Q L P+ L L+ EE + + + I G+ +E
Sbjct: 521 DQHAAHEKVLYEKTMKKVREKTFSSQTLSPPIILTLSIEEIEMLEKYREQIDAFGYEIE- 579
Query: 697 DPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSR 756
G + + A+P F D K + + D+ + ++ P+
Sbjct: 580 ---PFGGKEYAVTAIP----ADFTGIDTKTMFLEMLDDFANIN----------ENDSPNA 622
Query: 757 VRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTM 804
+ +AS +C+++I + R E +++++ L +L +P+NCPHGRPT+
Sbjct: 623 IMEKVASMSCKAAIKGNQHISRPEAERLIDELLELENPYNCPHGRPTI 670
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 75/156 (48%), Gaps = 11/156 (7%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICK 143
L + AL GV F N + T G+S KD I ++G +I + L + K
Sbjct: 174 LMERLALSHPGVSFKFINNG-----QTKMHTSGNSREKDMIYHIYGRDITSGLLEID-HK 227
Query: 144 SDSCKVEGFLSKPGQGSG-RNLGDRQYFFVNDRPVDLPKVSKLVNELYKG-ANSRQYPIA 201
++ V+GF+ KP G RN + +F+N R + +SK + E YKG QYP
Sbjct: 228 NEYFHVKGFIGKPLISRGNRNFEN---YFINGRYIKSALLSKSIEEAYKGFLMQHQYPFC 284
Query: 202 IMNFIVPTRACDVNVTPDKRKVFFSDECSILHALRE 237
++ F + T DVNV P K ++ FS+ +I L E
Sbjct: 285 VLYFSMDTDLLDVNVHPTKMELRFSNNEAIYKTLFE 320
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 45/63 (71%)
Query: 10 PTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNG 69
P I +++ + +I AG+V++ SS VKELVEN++DA AT++ + +KE G + ++ DNG
Sbjct: 2 PEITLLSQETIDKIAAGEVVERPSSVVKELVENAIDAKATAVTVEIKEGGISFIRITDNG 61
Query: 70 CGI 72
CGI
Sbjct: 62 CGI 64
>gi|194468324|ref|ZP_03074310.1| DNA mismatch repair protein MutL [Lactobacillus reuteri 100-23]
gi|194453177|gb|EDX42075.1| DNA mismatch repair protein MutL [Lactobacillus reuteri 100-23]
Length = 668
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 93/199 (46%), Gaps = 21/199 (10%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQ---STVLNQQPLLRPLKL 670
F ++ IGQ F++ + L+IVDQHAA E+ N+E Q +QQ L PL L
Sbjct: 462 FPDLQYIGQLQGTFLLAQAGDGLYIVDQHAAQERINYEYYRQKIGEVSADQQNFLVPLVL 521
Query: 671 DLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIST 730
+ + + + + H+D + G LE + F L++ P K + K++I
Sbjct: 522 NYSTVDAMTINQHLDTLAAVGLELE----SFGQNSFILRSHPTWFKEGQEEDTAKEMIDW 577
Query: 731 LADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLAD 790
L N G+ ++ ++M TA M++ C+ +I L E + +L+ L
Sbjct: 578 LIKN-GKLTV-KEFRMKTA---------IMMS---CKRAIKANHHLDEREAKALLKRLPQ 623
Query: 791 LNSPWNCPHGRPTMRHLVD 809
+P+NCPHGRP H D
Sbjct: 624 CENPFNCPHGRPVTVHFND 642
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 43/62 (69%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I ++ + ++I AG+VI+ +S VKELVENSLDA + ++I ++ G + +V+D+G G
Sbjct: 4 IHELDNILANQIAAGEVIERPASIVKELVENSLDAHSHRVDIIVENSGLDSVRVIDDGDG 63
Query: 72 IS 73
I+
Sbjct: 64 IA 65
Score = 43.5 bits (101), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 79/175 (45%), Gaps = 19/175 (10%)
Query: 73 SPNNFKVRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNI 132
SP R + AL V F T+ G+ + ++ G+++L+ + ++G+
Sbjct: 163 SPQTELTRITDIINRLALANPAVAFSFTHN-GREL----FRSAGNNNLQQVVAAIYGVQA 217
Query: 133 YNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFV--NDRPVDLPKVSKLVNELY 190
+ ++ D KV GF+S P RQY + N R + + +L +
Sbjct: 218 GRKMLEIS-GADDDFKVSGFVSLPELTRA----SRQYITITINHRYI---RNFELTKAII 269
Query: 191 KGANSR----QYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQE 241
+G S+ +YPIA++N + DVNV P KR+V S E ++ + E +++
Sbjct: 270 QGYESKLMVGRYPIAVINIDLDPVLVDVNVHPAKREVRLSKEQQLIKLIAETIRK 324
>gi|345320182|ref|XP_001507554.2| PREDICTED: PMS1 protein homolog 1-like [Ornithorhynchus anatinus]
Length = 517
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 86/171 (50%), Gaps = 15/171 (8%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICK 143
+ AY L+ +R V T+ K+VV + S K ++++ G + + L P
Sbjct: 175 ILMAYGLLKPQLRVVFTHN-----KAVVWQKSRVSDHKMALMSILGKAVMDNLAPFQYQS 229
Query: 144 SDS-CKVEGFLSKPGQG---SGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQ-- 197
+DS + GFL KP + + +R + F+N RPV + K++ + Y G ++
Sbjct: 230 ADSEMSLSGFLPKPDADHSVTSLSTAERSFLFINSRPVRQRDILKVIRQ-YCGRRGQKET 288
Query: 198 ---YPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSP 245
YP+ +N +VPT + DVN+TPDK +VF ++ S+L A+ L Y P
Sbjct: 289 THLYPVFFVNIVVPTASVDVNLTPDKSRVFLQNKESVLLAVETVLAGWYGP 339
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 46/71 (64%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
++ + V + + QVI ++S VKELVENSLDAGATSIE+ L+ YG E +V DNG G
Sbjct: 1 MKQLPAATVRLLSSSQVITSVASVVKELVENSLDAGATSIEVKLENYGLEKIEVRDNGQG 60
Query: 72 ISPNNFKVRAV 82
I + V AV
Sbjct: 61 IRAVDAPVMAV 71
>gi|163814089|ref|ZP_02205481.1| hypothetical protein COPEUT_00242 [Coprococcus eutactus ATCC 27759]
gi|158450538|gb|EDP27533.1| DNA mismatch repair domain protein [Coprococcus eutactus ATCC
27759]
Length = 702
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 94/202 (46%), Gaps = 21/202 (10%)
Query: 606 ERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTV---LNQQ 662
E+ KE + ++IGQ + + + D FI+DQHAA EK +E L ++ + Q
Sbjct: 503 EKFLTKEARAKHRLIGQLFKTYWLIEYDGKFFIMDQHAAHEKVKYEELMENYKNKKIYSQ 562
Query: 663 PLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVE 722
L+ P + L+ E +M+ G+ +E G F+L AVP + FG++
Sbjct: 563 YLMPPAVVTLSATEIEFLHENMETFEALGYQIEN----FGGREFKLNAVPDN---LFGLD 615
Query: 723 DVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQ 782
+ I +AD SS K T D L++ AC+++I + E
Sbjct: 616 GRELFIDFIADAS------SSAKKVTIDVFIHK-----LSTMACKAAIKGNTEISFKEAD 664
Query: 783 KILEHLADLNSPWNCPHGRPTM 804
+++ L L +P+ CPHGRPT+
Sbjct: 665 ALIDQLLKLENPYTCPHGRPTV 686
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 52/76 (68%), Gaps = 2/76 (2%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ +++ +++I AG+VI+ SS +KELVENS+D+GAT+I + +K G + +V DNG G
Sbjct: 2 IKVLDQNTINKIAAGEVIEKPSSVIKELVENSIDSGATAITVEVKGSGLSFLRVTDNGSG 61
Query: 72 ISPNNFKVRAVFLCQA 87
I + +V+ FL A
Sbjct: 62 IKKD--EVKLAFLRHA 75
Score = 46.6 bits (109), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 70/136 (51%), Gaps = 14/136 (10%)
Query: 112 LKTQGSSSLKDNIITVFGMNIY-NCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQY- 169
L T G+ L+D I ++G +I N LE A ++D K+ G++++P G +R +
Sbjct: 195 LFTSGNGKLRDIIYHIYGRDITSNLLEINA--ENDYMKISGYIARPCISRG----NRSFE 248
Query: 170 -FFVNDRPVDLPKVSKLVNELYKG-ANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSD 227
++VN R + ++K + + ++ ++P +NF V DVNV P K ++ F++
Sbjct: 249 GYYVNHRYIKSAVLTKAIEDAFRTFVMIHKFPFTEINFQVRPDLLDVNVHPTKMELKFAN 308
Query: 228 ECSI----LHALREGL 239
I +A+RE L
Sbjct: 309 SQDIYSFTYNAIRETL 324
>gi|417643103|ref|ZP_12293166.1| DNA mismatch repair protein, C-terminal domain protein
[Staphylococcus warneri VCU121]
gi|445059784|ref|YP_007385188.1| DNA mismatch repair protein [Staphylococcus warneri SG1]
gi|330686132|gb|EGG97752.1| DNA mismatch repair protein, C-terminal domain protein
[Staphylococcus epidermidis VCU121]
gi|443425841|gb|AGC90744.1| DNA mismatch repair protein [Staphylococcus warneri SG1]
Length = 649
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 103/226 (45%), Gaps = 29/226 (12%)
Query: 582 TLELSQPENEERKARALAAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQ 641
TLE + NE A++A+T + M+V+GQ + +II + + +F++DQ
Sbjct: 434 TLEQEEDRNENDIKGAVSAST--------RRRVPYMEVVGQVHGTYIIAQNENGMFMIDQ 485
Query: 642 HAADE--KYNFERLSQSTVLNQ-QPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDP 698
HAA E KY + R V N+ Q LL P+ + +E+ + + + + + G LE
Sbjct: 486 HAAQERIKYEYFREKIGEVTNEVQNLLIPMTFHFSKDEQFIIDQYQEELDRVGVHLEH-- 543
Query: 699 HALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVR 758
G + + + P E +KD+I + +N+ I KM ++ S
Sbjct: 544 --FGGHDYIVNSYPVWFPKAEAEEIIKDMIELVLENKK----IDVKKMREDAAIMMS--- 594
Query: 759 AMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTM 804
C+ SI L NEM +++ L ++ P+ CPHGRP +
Sbjct: 595 -------CKKSIKANHYLKNNEMADLIDQLREMEDPFTCPHGRPII 633
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 45/68 (66%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ + + ++I AG+V++ SS VKEL+EN++DA +T I I +++ G +VVDNG G
Sbjct: 4 IKELQTSLANKIAAGEVVERPSSVVKELLENAIDAQSTEINIEVEQSGVASIRVVDNGTG 63
Query: 72 ISPNNFKV 79
I ++ +
Sbjct: 64 IEADDLSL 71
Score = 43.1 bits (100), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 8/136 (5%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYF 170
+LKT GS + + ++GM + L + SD +EG++++P ++ Y
Sbjct: 195 LLKTNGSGKTNEVMAEIYGMKVAKDLVHITGDTSD-YHLEGYVARPEHSRS----NKHYI 249
Query: 171 --FVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSD 227
F+N R + ++K + E Y + +YPI +N + DVNV P K +V S
Sbjct: 250 SIFINGRYIKNFVLNKAIVEGYHTLLTIGRYPICYINIQMDPILVDVNVHPTKLEVRLSK 309
Query: 228 ECSILHALREGLQEIY 243
E + + E ++E +
Sbjct: 310 EEQLYDLIVEKIREAF 325
>gi|330801903|ref|XP_003288962.1| hypothetical protein DICPUDRAFT_153264 [Dictyostelium purpureum]
gi|325080993|gb|EGC34526.1| hypothetical protein DICPUDRAFT_153264 [Dictyostelium purpureum]
Length = 1482
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 103/218 (47%), Gaps = 21/218 (9%)
Query: 602 TTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQ 661
T + + + +E K I Q++ F++ + + + ++DQHA E+ E L +
Sbjct: 1265 TQKCQEIIPREMLKDFKFITQWDKKFLVCEANGIVLVLDQHAVSERIKLETLEKKYFGEN 1324
Query: 662 QPLLRPL----KLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKI 717
+ L P+ + LT E + ++ + GF +P ++ L+ VP +
Sbjct: 1325 KFDLCPMPERSRWSLTAYELELMKIYSKNLEDWGFEWRSNPTSITILQ-----VPMFCLV 1379
Query: 718 TFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALG 777
GV D+++ + L +N+G + S P +LAS+ACR++I G L
Sbjct: 1380 GLGVNDLREFLYLLENNKG------------SPSTKPPAAHRILASKACRTAIKFGHNLT 1427
Query: 778 RNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRK 815
+ K+LE L + N P+ C HGRP++ L++ +++ K
Sbjct: 1428 KEVCIKLLEDLNECNIPFQCAHGRPSIIPLINYSSLFK 1465
Score = 47.0 bits (110), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ + + V ++ + VI L A++E+V NS+DA ATSI I++ F+V DNG G
Sbjct: 20 IKKLEEDVSLKVRSSAVIVSLEQAIEEIVFNSIDAQATSIVISIN-LSNLTFEVKDNGFG 78
Query: 72 ISPNNFKVRAVFLCQA 87
I+ NFK C +
Sbjct: 79 INYGNFKTIGEHSCTS 94
>gi|240146293|ref|ZP_04744894.1| DNA mismatch repair protein MutL [Roseburia intestinalis L1-82]
gi|257201597|gb|EEU99881.1| DNA mismatch repair protein MutL [Roseburia intestinalis L1-82]
Length = 686
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 109/228 (47%), Gaps = 27/228 (11%)
Query: 580 AATLELSQPENEERKARALAAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIV 639
AA L S+ E+++ A++ E K+ + K+IGQ + + + + LFI+
Sbjct: 467 AAALPESKVTYEQQELAAVS------EGFLTKDAKKKHKIIGQLFDTYWMVEYEDKLFII 520
Query: 640 DQHAADEKYNFERLSQST---VLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEE 696
DQHAA EK +E+ + + Q L P+ L L+ EE + + + I G+ +E
Sbjct: 521 DQHAAHEKVLYEKTMKKVREKTFSSQTLSPPIILTLSIEEIEMLEKYREQIDAFGYEIE- 579
Query: 697 DPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSR 756
G + + A+P F D K + + D+ + ++ P+
Sbjct: 580 ---PFGGKEYAVTAIP----ADFTGIDTKTMFLEMLDDFANIN----------ENDSPNA 622
Query: 757 VRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTM 804
+ +AS +C+++I + R E +++++ L +L +P+NCPHGRPT+
Sbjct: 623 IMEKVASMSCKAAIKGNQHISRPEAERLIDELLELENPYNCPHGRPTI 670
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 75/156 (48%), Gaps = 11/156 (7%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICK 143
L + AL GV F N + T G+S KD I ++G +I + L + K
Sbjct: 174 LMERLALSHPGVSFKFINNG-----QTKMHTSGNSREKDMIYHIYGRDITSGLLEID-HK 227
Query: 144 SDSCKVEGFLSKPGQGSG-RNLGDRQYFFVNDRPVDLPKVSKLVNELYKG-ANSRQYPIA 201
++ V+GF+ KP G RN + +F+N R + +SK + E YKG QYP
Sbjct: 228 NEYFHVKGFIGKPLISRGNRNFEN---YFINGRYIKSALLSKSIEEAYKGFLMQHQYPFC 284
Query: 202 IMNFIVPTRACDVNVTPDKRKVFFSDECSILHALRE 237
++ F + T DVNV P K ++ FS+ +I L E
Sbjct: 285 VLYFSMDTDLLDVNVHPTKMELRFSNNEAIYKTLFE 320
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 45/63 (71%)
Query: 10 PTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNG 69
P I +++ + +I AG+V++ SS VKELVEN++DA AT++ + +KE G + ++ DNG
Sbjct: 2 PEITLLSQETIDKIAAGEVVERPSSVVKELVENAIDAKATAVTVEIKEGGISFIRITDNG 61
Query: 70 CGI 72
CGI
Sbjct: 62 CGI 64
>gi|433590039|ref|YP_007279535.1| DNA mismatch repair protein MutL [Natrinema pellirubrum DSM 15624]
gi|448333846|ref|ZP_21523034.1| DNA mismatch repair protein MutL [Natrinema pellirubrum DSM 15624]
gi|433304819|gb|AGB30631.1| DNA mismatch repair protein MutL [Natrinema pellirubrum DSM 15624]
gi|445621420|gb|ELY74895.1| DNA mismatch repair protein MutL [Natrinema pellirubrum DSM 15624]
Length = 724
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 93/191 (48%), Gaps = 18/191 (9%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLN--QQPLLRPLKLDLTP 674
++V+GQ + +++ + D L ++DQHAADE+ N+ERL + + Q L P++L+LT
Sbjct: 528 LRVLGQLHDTYLVCETDDGLVLIDQHAADERVNYERLQAAFADDPTAQALADPVELELTA 587
Query: 675 EEEVVASMHMDIIRKNGFSLEE-DPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
E + + D + + GF + D +A + VP + T + ++D++++
Sbjct: 588 AEAEAFAQYSDALSRLGFYADRTDDRTVA-----VTTVPAVLEETLEPDRLRDVLASFVA 642
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNS 793
E +T D++ L AC SI +L + +LE L D +
Sbjct: 643 GDSEAG------AETVDALADE----FLGDLACYPSITGNTSLTEGSVVDLLEALDDCEN 692
Query: 794 PWNCPHGRPTM 804
P+ CPHGRP +
Sbjct: 693 PYACPHGRPVI 703
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 51/79 (64%)
Query: 1 MDVETPTNSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGE 60
M + P + IR +++ V RI AG+V++ +SAVKELVENSLDA A S+++ ++ G
Sbjct: 1 MTTDPPQDDTEIRQLDEDTVARIAAGEVVERPASAVKELVENSLDADADSVDVTVEAGGT 60
Query: 61 EWFQVVDNGCGISPNNFKV 79
+ +V D+G G+S + +
Sbjct: 61 DLIRVADDGRGMSEADLRA 79
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 55/133 (41%), Gaps = 20/133 (15%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSC-----KVEGFLSKPGQGSGRNLG 165
V T G L+ ++ V+G + + + PV D V G +S P N
Sbjct: 206 VFSTTGQGDLQAAVLAVYGREVASSMIPVEADGDDLPPGPLESVSGLVSHPET----NRS 261
Query: 166 DRQYF--FVNDRPVDLPKVSKLVNELYKGANSRQ-----YPIAIMNFIVPTRACDVNVTP 218
R Y +VN R V + V E GA Q YP + VP A DVNV P
Sbjct: 262 SRDYLATYVNGRAV----TADAVREGIMGAYGTQLGGDRYPFVTLFLEVPGEAVDVNVHP 317
Query: 219 DKRKVFFSDECSI 231
KR+V F D+ ++
Sbjct: 318 RKREVRFDDDDAV 330
>gi|74706073|sp|O95746.1|PM2LG_HUMAN RecName: Full=Postmeiotic segregation increased 2-like protein 16
gi|4239956|dbj|BAA74756.1| PMS2L16 [Homo sapiens]
Length = 92
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 52/67 (77%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+PI++ VH+IC+G V+ LS+AVK++V NSLDAGAT+I++ LK+YG + +V NGCG
Sbjct: 14 IKPIDRKSVHQICSGPVVLSLSTAVKKIVGNSLDAGATNIDLKLKDYGMDLIEVSGNGCG 73
Query: 72 ISPNNFK 78
+ NF+
Sbjct: 74 VEEENFE 80
>gi|160914742|ref|ZP_02076956.1| hypothetical protein EUBDOL_00749 [Eubacterium dolichum DSM 3991]
gi|158433282|gb|EDP11571.1| DNA mismatch repair domain protein [Eubacterium dolichum DSM 3991]
Length = 659
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 103/201 (51%), Gaps = 39/201 (19%)
Query: 616 RMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQ---STVLNQQPLLRPLKLDL 672
++ VIGQF+ +I+ + ++ L+I+DQHAA E+Y++E + + S V + QPLL P+ ++
Sbjct: 471 QLHVIGQFHNSYILAEGEKGLYIIDQHAAQERYHYEMIQKQILSGVKDTQPLLIPITVET 530
Query: 673 TPEEEVVASMHMDIIRKNGFSLEEDPHAL---AGLRFRLKAVPFSKKITFGVEDV--KDL 727
T + A +D D +AL G+ F + FG + ++L
Sbjct: 531 T----ISAVSRID-----------DLNALLEQVGIHFEV----------FGNTTLLCREL 565
Query: 728 ISTLADNQGEC---SIISSYKMDTADSVCPSRVRA-MLASRACRSSIMIGDALGRNEMQK 783
L D + E +I ++ D D + ++R +A+ AC SSI +L EM++
Sbjct: 566 PIWLKDTKEEAFLQDMIDLWQKD--DEISLDKLRKHTIATMACHSSIRFHRSLTMEEMKQ 623
Query: 784 ILEHLADLNSPWNCPHGRPTM 804
++ L P++CPHGRPT+
Sbjct: 624 VILDLGKCEQPFHCPHGRPTL 644
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 42/65 (64%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I +++ + + I AG+V++ S VKELVENS+DA A IEI + + G + ++D+GCG
Sbjct: 4 IHQLDEHLSNMIAAGEVVERPSGIVKELVENSIDAKAKHIEIQILQGGIDCITIIDDGCG 63
Query: 72 ISPNN 76
+ +
Sbjct: 64 MDAQD 68
>gi|300712236|ref|YP_003738050.1| DNA mismatch repair protein MutL [Halalkalicoccus jeotgali B3]
gi|448295930|ref|ZP_21485991.1| DNA mismatch repair protein MutL [Halalkalicoccus jeotgali B3]
gi|299125919|gb|ADJ16258.1| DNA mismatch repair protein MutL [Halalkalicoccus jeotgali B3]
gi|445582653|gb|ELY36993.1| DNA mismatch repair protein MutL [Halalkalicoccus jeotgali B3]
Length = 649
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 89/191 (46%), Gaps = 22/191 (11%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTV--LNQQPLLRPLKLDLTP 674
++V+GQ +++ + L +VDQHAADE+ ++ERL Q L+ P++L+LT
Sbjct: 453 LRVLGQIQDTYVLCAAPKGLLVVDQHAADERVHYERLRAELAGETTTQTLVEPVELELTA 512
Query: 675 EEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIST-LAD 733
E + H + + GF+ + G R+ AVP + T E ++D +S L+
Sbjct: 513 REAELFDAHEGALARVGFAATRE-----GRTVRIGAVPAAFDATLSPELLRDALSACLSG 567
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNS 793
+ GE + V +L AC ++ +L + +L L +
Sbjct: 568 DPGET--------------VEATVDELLGDLACYPAVTGNTSLREGSVVDLLGALDGCEN 613
Query: 794 PWNCPHGRPTM 804
P+ CPHGRPT+
Sbjct: 614 PYACPHGRPTV 624
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 45/67 (67%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR ++ V +I AG+V++ +S VKELVENSLDAGAT I +A+ G + +V D+G G
Sbjct: 8 IRALDPETVDKIAAGEVVERPASVVKELVENSLDAGATGITVAVGSGGRDRIRVADDGVG 67
Query: 72 ISPNNFK 78
++ + +
Sbjct: 68 MNEGSVR 74
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 69/162 (42%), Gaps = 21/162 (12%)
Query: 88 YALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV-AICKSDS 146
YAL GVRF + G+ V T G L+ +++V+G + + P+ +
Sbjct: 183 YALANPGVRFALEHD-GREV----FSTTGQGDLQATVLSVYGREVARAMVPIEGLAAGPL 237
Query: 147 CKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQ-----YPIA 201
+ G++S P + R+ +VN R V SK + GA Q YP A
Sbjct: 238 EGLSGYVSDPE--TTRSSPAYVSTYVNGRYVR----SKPIRSAVVGAYGTQLAPDRYPFA 291
Query: 202 IMNFIVPTRACDVNVTPDKRKVFFSD----ECSILHALREGL 239
+++ V DVNV P K +V F D E I +RE L
Sbjct: 292 VLDLDVSPGTVDVNVHPRKMEVRFGDGEAIEAQIEKTVRETL 333
>gi|223043270|ref|ZP_03613317.1| DNA mismatch repair protein MutL [Staphylococcus capitis SK14]
gi|417908028|ref|ZP_12551795.1| DNA mismatch repair protein, C-terminal domain protein
[Staphylococcus capitis VCU116]
gi|222443481|gb|EEE49579.1| DNA mismatch repair protein MutL [Staphylococcus capitis SK14]
gi|341595115|gb|EGS37793.1| DNA mismatch repair protein, C-terminal domain protein
[Staphylococcus capitis VCU116]
Length = 655
Score = 79.3 bits (194), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 92/192 (47%), Gaps = 23/192 (11%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADE--KYNFERLSQSTVLNQ-QPLLRPLKLDLT 673
M+V+GQ + +II + + +F++DQHAA E KY + R V N Q LL PL +
Sbjct: 467 MEVVGQVHGTYIIAQNENGMFMIDQHAAQERIKYEYFRDKIGEVSNDVQNLLIPLTFHFS 526
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
+E+++ ++D + K G LE G + + + P E +KD+I + +
Sbjct: 527 KDEQMIIDQYIDELDKVGIHLEH----FGGHDYIVNSYPVWFPKAEAQEIIKDMIELVLE 582
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLA-SRACRSSIMIGDALGRNEMQKILEHLADLN 792
N+ K+D ++R A +C+ SI L NEM +++ L +
Sbjct: 583 NK---------KVDV------KKIREDAAIMMSCKKSIKANHYLKNNEMSDLIDQLREAE 627
Query: 793 SPWNCPHGRPTM 804
P+ CPHGRP +
Sbjct: 628 DPFTCPHGRPII 639
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 45/68 (66%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ + + ++I AG+V++ SS VKEL+EN++DA +T I I +++ G +VVDNG G
Sbjct: 4 IKELQTSLANKIAAGEVVERPSSVVKELLENAIDAKSTEINIEVEQSGISSIRVVDNGTG 63
Query: 72 ISPNNFKV 79
I ++ +
Sbjct: 64 IEQDDLSL 71
Score = 41.6 bits (96), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 63/136 (46%), Gaps = 8/136 (5%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYF 170
++ T GS + + ++GM + L ++ SD +EGF +KP ++ Y
Sbjct: 195 LISTNGSGRTNEVMAEIYGMRVAKDLVHISGDTSD-YHLEGFFAKPEHSRS----NKHYI 249
Query: 171 --FVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSD 227
F+N R + ++K + E Y + +YPI +N + DVNV P K +V S
Sbjct: 250 SIFINGRYIKNFILNKAILEGYHTLLTIGRYPICYINIEMDPILVDVNVHPTKLEVRLSK 309
Query: 228 ECSILHALREGLQEIY 243
E + + E ++E +
Sbjct: 310 EDQLYDLIVEKIREAF 325
>gi|227544211|ref|ZP_03974260.1| DNA mismatch repair protein MutL [Lactobacillus reuteri CF48-3A]
gi|338204108|ref|YP_004650253.1| DNA mismatch repair protein HexB [Lactobacillus reuteri SD2112]
gi|133930483|gb|ABO43813.1| MutL [Lactobacillus reuteri]
gi|227185804|gb|EEI65875.1| DNA mismatch repair protein MutL [Lactobacillus reuteri CF48-3A]
gi|336449348|gb|AEI57963.1| DNA mismatch repair protein HexB [Lactobacillus reuteri SD2112]
Length = 668
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 93/199 (46%), Gaps = 21/199 (10%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQ---STVLNQQPLLRPLKL 670
F ++ IGQ F++ + L+IVDQHAA E+ N+E Q +QQ L PL L
Sbjct: 462 FPDLQYIGQLQGTFLLAQAGDGLYIVDQHAAQERINYEYYRQKIGEVSADQQNFLVPLVL 521
Query: 671 DLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIST 730
+ + + + + H+D + G LE + F L++ P K + K++I
Sbjct: 522 NYSTVDAMTINQHLDTLAAVGLELE----SFGQNSFILRSHPTWFKEGQEEDTAKEMIDW 577
Query: 731 LADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLAD 790
L N G+ ++ ++M TA M++ C+ +I L E + +L+ L
Sbjct: 578 LIKN-GKLTV-KEFRMKTA---------IMMS---CKRAIKANHHLDEREAKALLKRLPQ 623
Query: 791 LNSPWNCPHGRPTMRHLVD 809
+P+NCPHGRP H D
Sbjct: 624 CENPFNCPHGRPVTVHFND 642
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 46/68 (67%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I ++ + ++I AG+VI+ +S VKELVENSLDA + ++I ++ G + +V+D+G G
Sbjct: 4 IHELDNILANQIAAGEVIERPASIVKELVENSLDAHSHRVDIIVENSGLDSVRVIDDGDG 63
Query: 72 ISPNNFKV 79
I+ + ++
Sbjct: 64 IAAEDIRL 71
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 79/172 (45%), Gaps = 13/172 (7%)
Query: 73 SPNNFKVRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNI 132
SP R + AL V F T+ G+ + ++ G+++L+ + ++G+
Sbjct: 163 SPQTELTRITDIINRLALANPAVAFSFTHN-GREL----FRSAGNNNLQQVVAAIYGVQA 217
Query: 133 YNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFV--NDRPVDLPKVSKLVNELY 190
+ ++ D KV GF+S P RQY + N R + +++K + + Y
Sbjct: 218 GRKMLEIS-GADDDFKVSGFVSLPELTRA----SRQYITITINHRYIRNFELTKAITQGY 272
Query: 191 KGA-NSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQE 241
+ +YPIA++N + DVNV P KR+V S E ++ + E +++
Sbjct: 273 ESKLMVGRYPIAVINIDLDPVLVDVNVHPAKREVRLSKEQQLIKLIAETIRQ 324
>gi|448313288|ref|ZP_21503011.1| DNA mismatch repair protein MutL [Natronolimnobius innermongolicus
JCM 12255]
gi|445598925|gb|ELY52971.1| DNA mismatch repair protein MutL [Natronolimnobius innermongolicus
JCM 12255]
Length = 770
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 92/191 (48%), Gaps = 18/191 (9%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQS--TVLNQQPLLRPLKLDLTP 674
++V+GQ + +++ + D L ++DQHAADE+ N+ERL ++ Q L P++L+LT
Sbjct: 575 LRVLGQLHDTYLVCETDDGLVLIDQHAADERVNYERLQRAFDDDPTAQALAEPVELELTA 634
Query: 675 EEEVVASMHMDIIRKNGFSLEE-DPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
E + D + + GF + D +A + VP + T E ++D++ + +
Sbjct: 635 AEAEAFEHYRDALSRLGFYADRIDDRTIA-----VTTVPAVLEETLEPERLRDVLVSFVE 689
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNS 793
E +T D++ L AC SI +L + +LE L D +
Sbjct: 690 GDREAG------AETVDALADE----FLGDLACYPSITGNTSLTEGSVVDLLEALDDCEN 739
Query: 794 PWNCPHGRPTM 804
P+ CPHGRP +
Sbjct: 740 PYACPHGRPVV 750
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 69/117 (58%), Gaps = 4/117 (3%)
Query: 3 VETPTNSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEW 62
ETP ++ IR +++ V RI AG+V++ +SAVKELVENS+DAGA S+++ ++E G E
Sbjct: 2 TETPQDT-DIRQLDEHTVARIAAGEVVERPASAVKELVENSVDAGADSVDVTVEEGGTEL 60
Query: 63 FQVVDNGCGISPNNFKVRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSS 119
+V D+G G+ N VRA + I +G+ + + T + L T GS S
Sbjct: 61 IRVADDGRGM--NETDVRAAVREHTTSKI-EGLEDLESGVTTLGFRGEALHTIGSVS 114
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 57/134 (42%), Gaps = 22/134 (16%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSC------KVEGFLSKPGQGSGRNL 164
V T G L+ ++ V+G ++ + + PV D V G +S P N
Sbjct: 207 VFATTGQGDLQAAVLAVYGRDVASAMIPVD-ADGDELPPGPLESVTGLVSHPET----NR 261
Query: 165 GDRQYF--FVNDRPVDLPKVSKLVNELYKGANSRQ-----YPIAIMNFIVPTRACDVNVT 217
R+Y +VNDR V + + E GA Q YP ++ P DVNV
Sbjct: 262 SSREYLSTYVNDRAV----TADPIREGIMGAYGTQLGGDRYPFVVLFLEAPGETVDVNVH 317
Query: 218 PDKRKVFFSDECSI 231
P KR+V F D+ S+
Sbjct: 318 PRKREVRFDDDDSV 331
>gi|355677887|ref|ZP_09060654.1| hypothetical protein HMPREF9469_03691 [Clostridium citroniae
WAL-17108]
gi|354812973|gb|EHE97587.1| hypothetical protein HMPREF9469_03691 [Clostridium citroniae
WAL-17108]
Length = 679
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 96/192 (50%), Gaps = 21/192 (10%)
Query: 616 RMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQ---QPLLRPLKLDL 672
R K+IGQ + + + ++ LFI+DQHAA EK +E+ ++ Q Q + P+ L L
Sbjct: 490 RHKLIGQLFDTYWMVEYNEQLFIIDQHAAHEKVLYEKTIKTLKTRQYDTQMVEPPIILTL 549
Query: 673 TPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLA 732
EEV+ S +M GF +E G + ++ VP + E + ++I L+
Sbjct: 550 NMNEEVLLSRYMSYFTGMGFEIE----PFGGREYAVRGVPANLFSIAQKELLIEMIDGLS 605
Query: 733 DNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLN 792
D+ IS + P + +AS +C++++ +L E ++++ L L+
Sbjct: 606 DD------ISVHN--------PDIIYERVASMSCKAAVKGHHSLSAAEANELIDQLLQLD 651
Query: 793 SPWNCPHGRPTM 804
+P+ CPHGRPT+
Sbjct: 652 NPYACPHGRPTI 663
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 71/143 (49%), Gaps = 13/143 (9%)
Query: 95 VRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLS 154
+RF+ N L T G+ +LKD I TVFG I + L V + D +V GF+
Sbjct: 187 IRFIQNNQNK-------LYTSGNHNLKDLIYTVFGREITSNLLAVNAQEGD-IQVSGFIG 238
Query: 155 KPGQG-SGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKG-ANSRQYPIAIMNFIVPTRAC 212
KP S RN + +F+N R + +SK + E YK +YP +++F +
Sbjct: 239 KPVIARSNRNYEN---YFINGRYIRSSVISKAIEEAYKPFMMQHKYPFTMLHFTIQQDTL 295
Query: 213 DVNVTPDKRKVFFSDECSILHAL 235
DVNV P K ++ FSD ++ A+
Sbjct: 296 DVNVHPTKMELRFSDGEAVYRAV 318
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 44/61 (72%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I +++ +++I AG+VI+ +S VKEL+EN++DA AT++ I +K+ G +V DNGCG
Sbjct: 4 ITVLDQSTINKIAAGEVIERPASVVKELLENAIDAQATAVTIEIKDGGCSMVRVTDNGCG 63
Query: 72 I 72
I
Sbjct: 64 I 64
>gi|335429544|ref|ZP_08556442.1| DNA mismatch repair protein [Haloplasma contractile SSD-17B]
gi|334889554|gb|EGM27839.1| DNA mismatch repair protein [Haloplasma contractile SSD-17B]
Length = 627
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 102/209 (48%), Gaps = 23/209 (11%)
Query: 600 AATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFE-RLSQ-ST 657
A +T E + K+ + IGQ ++I + ++ LF++DQHAA E+ N+E LSQ S
Sbjct: 422 ADSTPKETVTNKKRLPNLDYIGQLGGTYLIAQNEEGLFLIDQHAAQERINYEFYLSQLSK 481
Query: 658 VLNQ-QPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKK 716
+N+ LL P+ L+ T E ++ D++R+ G E +F +K+ ++
Sbjct: 482 TINEFYDLLVPITLEFTMNESLIIEERADVLREIGIKFE---------KFGIKSFIVTRL 532
Query: 717 IT-FGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDA 775
FG D K L+ T+ D+ I+ K+ + + +C+ SI
Sbjct: 533 PNWFGKADEKYLLDTIFDH-----ILREKKL-----TYKQLFEELAITLSCKRSIKANHY 582
Query: 776 LGRNEMQKILEHLADLNSPWNCPHGRPTM 804
+ E++K+L L ++P+ CPHGRP +
Sbjct: 583 INEYEVKKLLHDLETCDNPYTCPHGRPVV 611
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 44/61 (72%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ + + + ++I AG+V++ +S VKEL+EN++DA AT I+I L E G + +V+DNG G
Sbjct: 4 IQIMKESLANKIAAGEVVERPASVVKELIENAIDANATKIDIHLTESGLKQIKVIDNGDG 63
Query: 72 I 72
+
Sbjct: 64 M 64
>gi|58476376|gb|AAH89718.1| pms1-prov protein, partial [Xenopus (Silurana) tropicalis]
Length = 928
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 82/168 (48%), Gaps = 13/168 (7%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICK 143
L AY ++ +R + TN K++V + +S K ++V G I NC+ P+
Sbjct: 182 LLMAYGIVTPNLRILFTNN-----KALVWQKSKTSDHKMAFMSVVGSAIMNCMVPIQYQS 236
Query: 144 SD-SCKVEGFLSKP---GQGSGRNLGDRQYFFVNDRPVDLPKVSKLV----NELYKGANS 195
D + G+L KP + + ++ + F+N RP+ ++ K+V N+
Sbjct: 237 EDPKIFINGYLPKPYADNTTTSLSSSEKSFLFINRRPIYHKEILKMVRWYHNQSLNKGTP 296
Query: 196 RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIY 243
R YP+ MN +P DVN+TPDK ++ ++ +LHA+ L+ +Y
Sbjct: 297 RCYPVFFMNIELPASCLDVNLTPDKTQIMLQNKEFVLHAVENVLRSVY 344
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 41/65 (63%)
Query: 18 GVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNF 77
+ + + QVI + S VKELVEN+LDA ATSIEI L+ +G + +V DNG GI ++
Sbjct: 14 ATIRLLSSSQVITSVVSVVKELVENALDANATSIEIKLENFGFDKIEVRDNGKGIKSDDT 73
Query: 78 KVRAV 82
V V
Sbjct: 74 PVMGV 78
>gi|344213218|ref|YP_004797538.1| DNA mismatch repair protein MutL [Haloarcula hispanica ATCC 33960]
gi|343784573|gb|AEM58550.1| DNA mismatch repair protein MutL [Haloarcula hispanica ATCC 33960]
Length = 716
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 86/194 (44%), Gaps = 19/194 (9%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQ--STVLNQQPLLRPLKLDLTP 674
M+++GQ +++ + D L +VDQHAADE+ N+ERL Q L P++L+LT
Sbjct: 518 MRILGQLADTYVVAETDDGLVLVDQHAADERVNYERLKAKFEGETTTQALANPVELELTA 577
Query: 675 EEEVVASMHMDIIRKNGFSLEEDPHALAGLR-FRLKAVPFSKKITFGVEDVKDLISTLAD 733
E V D + GF A G R ++ +P G + V+D++
Sbjct: 578 REAEVFDRRSDALASLGFHT-----ARTGERSIEVRTLPGVIADAAGPDIVRDVLGAFVA 632
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNS 793
E + +L AC S+ +L ++++L L D +
Sbjct: 633 GDDEAAATVEAAA-----------DELLGDLACYPSVTGNTSLTEGSVRELLAALDDCEN 681
Query: 794 PWNCPHGRPTMRHL 807
P+ CPHGRPT+ H+
Sbjct: 682 PYACPHGRPTVIHI 695
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 42/61 (68%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ ++ V RI AG+V++ +S VKELVEN++DA AT +E+ ++ G + +V D+G G
Sbjct: 4 IQRLDDRTVERIAAGEVVERPASVVKELVENAIDADATRVEVVVEAGGTDGIRVTDDGVG 63
Query: 72 I 72
+
Sbjct: 64 M 64
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 80/200 (40%), Gaps = 40/200 (20%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAIC--------KSDSC------KVEGFLSKP 156
T G L++ +++V+G + + V +SDS V G +S P
Sbjct: 197 TFSTTGQGDLRETVMSVYGREVAESMISVGAGSEANADGDESDSFPDGPLDGVHGLVSHP 256
Query: 157 GQGSGRNLGDRQYF--FVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACD 213
N R+Y +VN R V V V + Y + +YP A++ VP D
Sbjct: 257 ET----NRAGREYLSTYVNGRYVRAGTVRDAVVDAYGTQIAPDRYPFAVLFLDVPAGDVD 312
Query: 214 VNVTPDKRKVFFSDECSILHA---------LREGLQEIYSPNNASYSVNKVEQL-IEPEK 263
VNV P K +V F+D+ + LREGL +P S EQ I PE
Sbjct: 313 VNVHPRKMEVRFADDEGVREQVRTAVEDALLREGLLRSTAPRGRSAP----EQTEITPES 368
Query: 264 SGPSSGAESCMFLEQLSPDG 283
+G S E+ SPDG
Sbjct: 369 NGTSDSER-----ERSSPDG 383
>gi|392426157|ref|YP_006467151.1| DNA mismatch repair protein MutL [Desulfosporosinus acidiphilus
SJ4]
gi|391356120|gb|AFM41819.1| DNA mismatch repair protein MutL [Desulfosporosinus acidiphilus
SJ4]
Length = 684
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 89/187 (47%), Gaps = 20/187 (10%)
Query: 620 IGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQP---LLRPLKLDLTPEE 676
IGQ +I+ + L ++DQHAA E+ N+ER+ QQ LL P+ ++ T +E
Sbjct: 498 IGQLFNTYILATDGEVLLMIDQHAAHERINYERILAEFKQKQQASQTLLIPIPMEFTLQE 557
Query: 677 EVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQG 736
E V HM ++ + GF LE+ + L+ VP + G +L+ +
Sbjct: 558 EQVLLEHMWMLNEMGFVLEQ----FGSQTYLLRGVP----VQTGNFPADELLRQFLEEVL 609
Query: 737 ECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWN 796
+ + SY D + + + AC+ SI D+L EM++++ L +P+
Sbjct: 610 QKNATPSY-----DHLLKEWIYLL----ACKESIKAKDSLALLEMEQLMARLNQTENPYT 660
Query: 797 CPHGRPT 803
CPHGRPT
Sbjct: 661 CPHGRPT 667
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 39/53 (73%)
Query: 21 HRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGIS 73
++I AG+V++ S VKEL+EN+LDAGA I+I+++E G +V D+G G+S
Sbjct: 14 NQIAAGEVVERPVSVVKELIENALDAGAKHIDISIEENGVPMIRVRDDGKGMS 66
Score = 43.9 bits (102), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 57/122 (46%), Gaps = 10/122 (8%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYF 170
VL+T G LK+ + +FG ++ L V + D ++EG +S P R Q F
Sbjct: 197 VLQTSGRGDLKETMGAIFGQSLARQLIAVDVQGQD-WRLEGLISPPDL--VRKTKQAQTF 253
Query: 171 FVNDRPVDLPKVSKLVNELYKGANS----RQYPIAIMNFIVPTRACDVNVTPDKRKVFFS 226
+N R V + S L N L +G ++ + +PI ++ DVNV P K V F
Sbjct: 254 MINGRVV---RSSFLSNALEEGYHTLIPVKFHPIVALHLHGSPSDYDVNVHPTKMDVKFK 310
Query: 227 DE 228
+E
Sbjct: 311 NE 312
>gi|148263827|ref|YP_001230533.1| DNA mismatch repair protein [Geobacter uraniireducens Rf4]
gi|189030400|sp|A5GEV5.1|MUTL_GEOUR RecName: Full=DNA mismatch repair protein MutL
gi|146397327|gb|ABQ25960.1| DNA mismatch repair protein MutL [Geobacter uraniireducens Rf4]
Length = 602
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 90/194 (46%), Gaps = 20/194 (10%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQ---QPLLRPLKLDLT 673
+ VIGQFN +I+ + DL I+DQHAA E+ FE+L Q Q LL P ++L+
Sbjct: 415 LSVIGQFNAAYILCQDGTDLVIIDQHAAHERVAFEKLKAQFAAAQVESQRLLFPETIELS 474
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
+E H+ + + GFSLEE G + L AVP ++ G D + TL D
Sbjct: 475 FKEGATLREHLAELGRLGFSLEE----FGGATWLLNAVP---RLLSGT----DYLRTLRD 523
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNS 793
E + + AD+ + +L+ AC S + L E+ + +
Sbjct: 524 ILEELQTLGRSRT-FADA-----LEEILSRIACHSVVRGIHPLNGQEISALFAQMDATEF 577
Query: 794 PWNCPHGRPTMRHL 807
NCPHGRP +R L
Sbjct: 578 SSNCPHGRPVLRSL 591
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 43/62 (69%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ + + + ++I AG+V++ +S VKELVEN+LDAG + + + ++ G +V D+GCG
Sbjct: 5 IKILPENLTNKIAAGEVVERPASVVKELVENALDAGCSEVVVEIEAGGRRLIKVTDSGCG 64
Query: 72 IS 73
++
Sbjct: 65 MT 66
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 67/149 (44%), Gaps = 10/149 (6%)
Query: 95 VRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLS 154
VRF+ N G+ + + + L++ + T+ G + L P+ V G ++
Sbjct: 186 VRFIYNND-GRTIFRAL-----DADLRERVATLLGRALSADLYPLDF-HDGPLGVTGLIA 238
Query: 155 KPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSR-QYPIAIMNFIVPTRACD 213
KP R+ Y ++N R + V V + Y+ R +YP+ ++ VP D
Sbjct: 239 KPE--CSRSAASHLYTYINGRFIKDKVVQHAVLQAYRNFMERGRYPVVVLFITVPADEVD 296
Query: 214 VNVTPDKRKVFFSDECSILHALREGLQEI 242
VNV P K +V F ++ + A++ L+ +
Sbjct: 297 VNVHPTKHEVRFREQGRVHDAIQAALESV 325
>gi|258515357|ref|YP_003191579.1| DNA mismatch repair protein [Desulfotomaculum acetoxidans DSM 771]
gi|257779062|gb|ACV62956.1| DNA mismatch repair protein MutL [Desulfotomaculum acetoxidans DSM
771]
Length = 639
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/198 (33%), Positives = 104/198 (52%), Gaps = 24/198 (12%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFER----LSQSTVLNQQPLLRPLK 669
F + + Q +I+ D+ LFI+DQHAA E+ FE+ S+ V++Q LL P+
Sbjct: 451 FPSLWPLAQLMPTYILASADKGLFIIDQHAAHERILFEKYQKQFSEGQVVSQM-LLIPIT 509
Query: 670 LDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIS 729
L+L EE + H+ ++++ GF +EE F L+ VP ++ G E KDL
Sbjct: 510 LELNFREEELIIKHIILLKEIGFIIEE----FGKGTFLLRGVP--GNVSPGQE--KDLFF 561
Query: 730 TLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLA 789
+ D E S+ T V V+ M A+ AC++++ G+ L + M +LE LA
Sbjct: 562 DILDF-SEDSL-------TGREVL---VQNMAAAMACKAAVKAGEKLTPSAMLALLEQLA 610
Query: 790 DLNSPWNCPHGRPTMRHL 807
+ SP+ CPHGRPT+ HL
Sbjct: 611 ETESPYTCPHGRPTLIHL 628
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 65/120 (54%), Gaps = 11/120 (9%)
Query: 10 PTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNG 69
P I +++ ++I AG+V++ +S VKELVENSLDAGA++IEI + E G + V+DNG
Sbjct: 2 PKIIILDELTANQIAAGEVVERPASVVKELVENSLDAGASAIEINIYEGGLKSITVIDNG 61
Query: 70 CGISPNNFKVRAVFLCQAYALIAKGVRFVCTNTTG---------KNVKSVVLKTQGSSSL 120
G+S + + F A + +A NT G ++ V LKT+ S+
Sbjct: 62 SGMSEEDAVL--AFYRHATSKLASAEDLTNINTMGFRGEALPSIASIARVELKTRAQDSV 119
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 4/138 (2%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYF 170
V GS SL D + V+G+ I L P+ ++ K+ G+ S+P G +Q
Sbjct: 196 VFYAPGSGSLLDAVAAVYGIKIARELIPLE-EENALLKIYGYTSRPSVNRGNR--KQQTL 252
Query: 171 FVNDRPVDLPKVSKLVNELYKGA-NSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDEC 229
F+N R V + + + E Y+ +YP+ I+ + DVNV P K +V E
Sbjct: 253 FINHRLVKSSIILRAIEEAYRTILPPGRYPLTILALAINPGKVDVNVHPAKLEVRVEQEN 312
Query: 230 SILHALREGLQEIYSPNN 247
I ++E ++ N+
Sbjct: 313 EIAELIKESIKRALQANS 330
>gi|448390494|ref|ZP_21566117.1| DNA mismatch repair protein MutL [Haloterrigena salina JCM 13891]
gi|445666908|gb|ELZ19560.1| DNA mismatch repair protein MutL [Haloterrigena salina JCM 13891]
Length = 743
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 93/191 (48%), Gaps = 18/191 (9%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLN--QQPLLRPLKLDLTP 674
++V+GQ + +++ + D L ++DQHAADE+ N+ERL ++ + Q L P++L+LT
Sbjct: 547 LRVLGQLDDTYLVCETDDGLVLIDQHAADERVNYERLQRAFADDPAAQALAEPVELELTA 606
Query: 675 EEEVVASMHMDIIRKNGFSLEE-DPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
E + + + + GF + D +A + VP T E ++D++++ +
Sbjct: 607 AEAEAFEGYREALSRLGFYADRTDDRTVA-----VTTVPAVFDETLEPERLRDVLASFVE 661
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNS 793
E +T D++ L AC SI +L + +LE L D +
Sbjct: 662 GDREAG------AETVDALADE----FLGDLACYPSITGNTSLTEGSVVDLLEALDDCEN 711
Query: 794 PWNCPHGRPTM 804
P+ CPHGRP +
Sbjct: 712 PYACPHGRPVI 722
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 48/74 (64%)
Query: 6 PTNSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQV 65
P IR +++ V RI AG+V++ +SAVKELVENSLDA A S+++ ++E G E +V
Sbjct: 5 PPQETEIRQLDEDTVARIAAGEVVERPASAVKELVENSLDADADSVDVTVEEGGTELIRV 64
Query: 66 VDNGCGISPNNFKV 79
D+G G+ + +
Sbjct: 65 ADDGRGMGEADVRA 78
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 56/130 (43%), Gaps = 14/130 (10%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSC-----KVEGFLSKPGQGSGRNLG 165
V T G L+ ++ V+G + + + PV D V G +S P N
Sbjct: 205 VFATTGQGDLQAAVMAVYGREVASAMIPVEAEGDDLPPGPLESVSGLVSHPET----NRS 260
Query: 166 DRQYF--FVNDRPVDLPKVSKLVNELYKGA--NSRQYPIAIMNFIVPTRACDVNVTPDKR 221
+Y +VN R V V + + Y GA +YP + VP A DVNV P KR
Sbjct: 261 SPEYLATYVNGRAVTADAVREGIMGAY-GAQLGGDRYPFVTLFLEVPGEAVDVNVHPRKR 319
Query: 222 KVFFSDECSI 231
+V F D+ S+
Sbjct: 320 EVRFDDDDSV 329
>gi|284520128|ref|NP_001136373.2| PMS1 postmeiotic segregation increased 1 [Xenopus (Silurana)
tropicalis]
Length = 921
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 82/168 (48%), Gaps = 13/168 (7%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICK 143
L AY ++ +R + TN K++V + +S K ++V G I NC+ P+
Sbjct: 175 LLMAYGIVTPNLRILFTNN-----KALVWQKSKTSDHKMAFMSVVGSAIMNCMVPIQYQS 229
Query: 144 SD-SCKVEGFLSKP---GQGSGRNLGDRQYFFVNDRPVDLPKVSKLV----NELYKGANS 195
D + G+L KP + + ++ + F+N RP+ ++ K+V N+
Sbjct: 230 EDPKIFINGYLPKPYADNTTTSLSSSEKSFLFINRRPIYHKEILKMVRWYHNQSLNKGTP 289
Query: 196 RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIY 243
R YP+ MN +P DVN+TPDK ++ ++ +LHA+ L+ +Y
Sbjct: 290 RCYPVFFMNIELPASCLDVNLTPDKTQIMLQNKEFVLHAVENVLRSVY 337
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 41/65 (63%)
Query: 18 GVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNF 77
+ + + QVI + S VKELVEN+LDA ATSIEI L+ +G + +V DNG GI ++
Sbjct: 7 ATIRLLSSSQVITSVVSVVKELVENALDANATSIEIKLENFGFDKIEVRDNGKGIKSDDT 66
Query: 78 KVRAV 82
V V
Sbjct: 67 PVMGV 71
>gi|335040814|ref|ZP_08533935.1| DNA mismatch repair protein mutL [Caldalkalibacillus thermarum
TA2.A1]
gi|334179249|gb|EGL81893.1| DNA mismatch repair protein mutL [Caldalkalibacillus thermarum
TA2.A1]
Length = 637
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 91/188 (48%), Gaps = 24/188 (12%)
Query: 620 IGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQ-----QPLLRPLKLDLTP 674
IGQ + +I+ + ++ L+++DQHAA E+ +E ++ LNQ Q L PL L+ T
Sbjct: 451 IGQLHGTYILAQNEEGLYMIDQHAAQERIWYEHFTEK--LNQTERASQELAIPLVLEFTA 508
Query: 675 EEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADN 734
E + H I+ K G LEE H +R P ++ ++++I +
Sbjct: 509 GEAALIKKHQSILEKAGLFLEEFGHHAYMIRSHPNWFPQGEEEAL----IREMIDFAIHH 564
Query: 735 QGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSP 794
+G+ ++ ++ + A + AC+ SI L R EM+ +LE L ++P
Sbjct: 565 KGKLEWMT-FRDEVAKMM------------ACKQSIKANQYLTRKEMEALLEKLRLSSNP 611
Query: 795 WNCPHGRP 802
+ CPHGRP
Sbjct: 612 FTCPHGRP 619
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 67/125 (53%), Gaps = 20/125 (16%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ +++ + ++I AG+V++ +S VKELVEN++DA +T I++ +++ G + +V DNG G
Sbjct: 4 IQVMSEDLANKIAAGEVVERPASVVKELVENAIDAQSTVIDVEVEDGGLKRIKVTDNGTG 63
Query: 72 ISPNN-------------------FKVRAV-FLCQAYALIAKGVRFVCTNTTGKNVKSVV 111
+S + F+++ + F +A IA + G++ K +
Sbjct: 64 MSRQDSQLAFERHATSKVKTERDLFRIKTLGFRGEALPSIAAVSKVTLETWNGQDEKGTL 123
Query: 112 LKTQG 116
++ +G
Sbjct: 124 IRLEG 128
Score = 39.3 bits (90), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 53/119 (44%), Gaps = 8/119 (6%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYF 170
+L T G+ +L + ++G + P D + EGFLSKP +R Y
Sbjct: 196 LLSTSGNGNLLHILAHIYGHQAAKQMLPFQAAHLD-FEAEGFLSKPD----LTRANRHYL 250
Query: 171 --FVNDRPVDLPKVSKLVNELYKGA-NSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFS 226
+N R V +++ + + Y + +YP+ +++ + DVNV P K ++ S
Sbjct: 251 TVIINGRFVKHQGINRAILQAYHTLLPAHRYPVVLLSLKMDPSLLDVNVHPAKLEIRLS 309
>gi|89269106|emb|CAJ81837.1| PMS1 postmeiotic segregation increased 1 (S. cerevisiae) [Xenopus
(Silurana) tropicalis]
Length = 674
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 82/168 (48%), Gaps = 13/168 (7%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICK 143
L AY ++ +R + TN K++V + +S K ++V G I NC+ P+
Sbjct: 175 LLMAYGIVTPNLRILFTNN-----KALVWQKSKTSDHKMAFMSVVGSAIMNCMVPIQYQS 229
Query: 144 SD-SCKVEGFLSKP---GQGSGRNLGDRQYFFVNDRPVDLPKVSKLV----NELYKGANS 195
D + G+L KP + + ++ + F+N RP+ ++ K+V N+
Sbjct: 230 EDPKIFINGYLPKPYADNTTTSLSSSEKSFLFINRRPIYHKEILKMVRWYHNQSLNKGTP 289
Query: 196 RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIY 243
R YP+ MN +P DVN+TPDK ++ ++ +LHA+ L+ +Y
Sbjct: 290 RCYPVFFMNIELPASCLDVNLTPDKTQIMLQNKEFVLHAVENVLRSVY 337
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 41/65 (63%)
Query: 18 GVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNF 77
+ + + QVI + S VKELVEN+LDA ATSIEI L+ +G + +V DNG GI ++
Sbjct: 7 ATIRLLSSSQVITSVVSVVKELVENALDANATSIEIKLENFGFDKIEVRDNGKGIKSDDT 66
Query: 78 KVRAV 82
V V
Sbjct: 67 PVMGV 71
>gi|266623036|ref|ZP_06115971.1| DNA mismatch repair protein MutL [Clostridium hathewayi DSM 13479]
gi|288865200|gb|EFC97498.1| DNA mismatch repair protein MutL [Clostridium hathewayi DSM 13479]
Length = 662
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 119/239 (49%), Gaps = 33/239 (13%)
Query: 579 AAATLELSQPENE----ERKARALAAATTELE----RLFRKEDFGRMKVIGQFNLGFIIG 630
AAA + + PE E E A A +L+ +L + K+IGQ + +
Sbjct: 427 AAAVTKPAAPEGETITPEHDNTAGAGKPEQLDLFDGKLLEPKSRQMHKLIGQVFDTYWLV 486
Query: 631 KLDQDLFIVDQHAADEKYNFERLSQSTVLNQ----QPLLRPLKLDLTPEEEVVASMHMDI 686
+ ++ L+I+DQHAA EK +E+ + +T+ N+ Q L P+ L L EEV+ HM
Sbjct: 487 EFNEQLYIIDQHAAHEKVLYEK-TMATLKNREYSSQMLDPPIILTLNMNEEVLLKEHMKY 545
Query: 687 IRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVK-DLISTLADNQGECSIISSYK 745
GF +E G + ++ VP + ++ +D+ ++I L+D+ +S++
Sbjct: 546 FSDMGFEIE----PFGGREYAVRGVP-ANLLSIAKKDLLIEMIDGLSDD------VSTHN 594
Query: 746 MDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTM 804
P + +A+ +C++++ G+ L E ++++ L +L +P+ CPHGRPT+
Sbjct: 595 --------PDIIYDRVATMSCKAAVKGGNRLSAAEANELIDQLLNLENPYACPHGRPTI 645
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 46/63 (73%)
Query: 10 PTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNG 69
P I +++ +++I AG+VI+ +S VKEL+EN++DA AT++ + +KE G + +V DNG
Sbjct: 2 PNITLLDQNTINKIAAGEVIERPASVVKELLENAIDARATAVTVEIKEGGTTFIRVTDNG 61
Query: 70 CGI 72
CGI
Sbjct: 62 CGI 64
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 64/136 (47%), Gaps = 15/136 (11%)
Query: 95 VRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLS 154
+RF+ N L T G+ +LKD I TVFG I L V K D + GF+
Sbjct: 187 IRFIQNNQNK-------LHTSGNHNLKDIIYTVFGREIAANLLAVEAKKQD-ISISGFIG 238
Query: 155 KPGQGSGRNLGDRQY--FFVNDRPVDLPKVSKLVNELYKG-ANSRQYPIAIMNFIVPTRA 211
KP G +R Y +F+N R + +SK + E YK +YP +++F +
Sbjct: 239 KPVIARG----NRNYENYFINGRYIRSSIISKAIEEAYKPFMMQHKYPFTMLHFTIEPEL 294
Query: 212 CDVNVTPDKRKVFFSD 227
DVNV P K ++ F D
Sbjct: 295 LDVNVHPTKMELRFRD 310
>gi|326791329|ref|YP_004309150.1| DNA mismatch repair protein MutL [Clostridium lentocellum DSM 5427]
gi|326542093|gb|ADZ83952.1| DNA mismatch repair protein MutL [Clostridium lentocellum DSM 5427]
Length = 663
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 99/205 (48%), Gaps = 23/205 (11%)
Query: 618 KVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQ---QPLLRPLKLDLTP 674
+++GQ + + + + +FI+DQHAA E+ +E+ N+ Q LL P L +TP
Sbjct: 477 RIVGQVFKTYWLIEYHEKVFIIDQHAAHERVLYEQFMAEFKANEVATQLLLMPETLMVTP 536
Query: 675 EEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADN 734
E + + H ++ +K GF E A ++ VPF K+++ L +
Sbjct: 537 VEMTLLNEHEELFKKLGFQFE----AFGENAVAIREVPFILNEPLSPAVFKEVLDRLTHD 592
Query: 735 QGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSP 794
+ + D A+ + +R +CRS+I D + E +K++E L L++P
Sbjct: 593 KLQ---------DIAELKAEAIIRM-----SCRSAIKAHDQISDRECRKLIELLLALDNP 638
Query: 795 WNCPHGRPTMRHL--VDLTTIRKNI 817
+ CPHGRPT+ L VD+ + K I
Sbjct: 639 FTCPHGRPTLVALTQVDIEKMFKRI 663
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 54/95 (56%), Gaps = 12/95 (12%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ ++ +++I AG+V++ S VKELVENS+DA A+SI + +K G + +V DNG G
Sbjct: 4 IKILDTHTINKIAAGEVVERPCSVVKELVENSIDAKASSITVEIKNGGIDLIRVTDNGVG 63
Query: 72 ISPNNFKVRAVFLCQA----------YALIAKGVR 96
I + +V FL A Y +I+ G R
Sbjct: 64 IPKD--QVEVAFLRHATSKITSAEDLYEVISLGFR 96
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 63/133 (47%), Gaps = 10/133 (7%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIY-NCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQY 169
+ T G LK I+ ++G N LE KSD+ + G + KP N G+R Y
Sbjct: 196 IFTTSGDHELKHAILNIYGKEYARNTLE--CYYKSDTIECMGLIGKPV----LNRGNRNY 249
Query: 170 --FFVNDRPVDLPKVSKLVNELYKG-ANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFS 226
FF+N R + + V + YK ++P ++++ + DVNV P K +V F
Sbjct: 250 EHFFINGRYIKSQLLQGAVEDAYKTLVMVGKFPFSVLHLYLDPSLVDVNVHPTKLQVRFK 309
Query: 227 DECSILHALREGL 239
+ +I A+ EG+
Sbjct: 310 NPDTIYKAVYEGV 322
>gi|302413792|ref|XP_003004728.1| DNA mismatch repair protein pms1 [Verticillium albo-atrum
VaMs.102]
gi|261355797|gb|EEY18225.1| DNA mismatch repair protein pms1 [Verticillium albo-atrum
VaMs.102]
Length = 116
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/73 (54%), Positives = 50/73 (68%)
Query: 10 PTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNG 69
I+ I VHRI +GQVI DL S VKELVENSLDA AT+I++ K G E +V DNG
Sbjct: 2 AAIKAIEANTVHRIQSGQVIVDLCSVVKELVENSLDANATAIDVRFKNQGLEAIEVHDNG 61
Query: 70 CGISPNNFKVRAV 82
GISP+N++ A+
Sbjct: 62 SGISPDNYEGLAL 74
>gi|399575652|ref|ZP_10769410.1| DNA mismatch repair protein mutl [Halogranum salarium B-1]
gi|399239920|gb|EJN60846.1| DNA mismatch repair protein mutl [Halogranum salarium B-1]
Length = 756
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 92/190 (48%), Gaps = 16/190 (8%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLN--QQPLLRPLKLDLTP 674
++V+GQ +++ + L +VDQHAADE+ N+ERL + + Q L P++L+LT
Sbjct: 555 LRVLGQLFDTYLVAEAPDGLVLVDQHAADERVNYERLRREIRGDTPTQGLAEPVELELTA 614
Query: 675 EEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADN 734
E + + D + + GF E +R +VP E ++D+++ +
Sbjct: 615 REAALFEEYADALAELGFDAERTDERTVSVR----SVPAVFDAALEPELLRDVLTAFVEA 670
Query: 735 QGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSP 794
+ + +T D+V S +LA AC SI +L + ++LE L +P
Sbjct: 671 ERDGG------RETVDAVADS----LLADLACHPSITGNTSLTEGSVVELLEALDACENP 720
Query: 795 WNCPHGRPTM 804
+ CPHGRP +
Sbjct: 721 YACPHGRPVV 730
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 49/72 (68%)
Query: 8 NSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVD 67
+ PTIR +++ + RI AG+V++ +S VKELVENSLDA A+ + +A+ G++ +V D
Sbjct: 7 DRPTIRALDQTTIQRIAAGEVVERPASVVKELVENSLDADASRVSVAVWNGGKDGVRVRD 66
Query: 68 NGCGISPNNFKV 79
+G G++ + V
Sbjct: 67 DGVGMTEDELAV 78
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 9/135 (6%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSC--KVEGFLSKPGQGSGRNLGDRQ 168
V T+G SL+ +++V+G + + V ++ + G +S P R+
Sbjct: 205 VFATEGQGSLESTVLSVYGREVAEAMTRVESDPANDAVASISGLVSHPET----TRSGRE 260
Query: 169 YF--FVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACDVNVTPDKRKVFF 225
Y FVN R V + + V + Y G + +YP A++ VP + DVNV P K +V F
Sbjct: 261 YLSTFVNGRYVTAGSLREAVLDAYGGQLAPDRYPFAVLFLDVPPNSVDVNVHPRKMEVRF 320
Query: 226 SDECSILHALREGLQ 240
DE + A+ ++
Sbjct: 321 DDESGVKAAVESAVE 335
>gi|887629|emb|CAA61428.1| ORF N2317 [Saccharomyces cerevisiae]
Length = 256
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 50/71 (70%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I IN VHRI +GQVI DL++AVKELV+NS+DA A IEI K+YG E + DNG G
Sbjct: 35 IHQINDIDVHRITSGQVITDLTTAVKELVDNSIDANANQIEIIFKDYGLESIECSDNGDG 94
Query: 72 ISPNNFKVRAV 82
I P+N++ A+
Sbjct: 95 IDPSNYEFLAL 105
>gi|260948620|ref|XP_002618607.1| hypothetical protein CLUG_02066 [Clavispora lusitaniae ATCC 42720]
gi|238848479|gb|EEQ37943.1| hypothetical protein CLUG_02066 [Clavispora lusitaniae ATCC 42720]
Length = 610
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 101/221 (45%), Gaps = 20/221 (9%)
Query: 611 KEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPL---LR- 666
++D G +KV+ Q + FI+ K LFI+DQHA DE+ E+ + + LR
Sbjct: 395 QQDIGTLKVVKQVSKQFILAKSGSSLFILDQHACDERVQVEQFFREYITAMSDPSCDLRI 454
Query: 667 ----PLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVE 722
+ L EE+ + D+ R G S + L + + +P + E
Sbjct: 455 RCDETMAFSLAKEEQTSFLRYEDVFRNFGIS-----YVLGNRKCTVTHLPRALSHETQPE 509
Query: 723 DVKDL----ISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGR 778
+K L I + + + + ++ ++ D ++ PS + L S ACR S+ GD L +
Sbjct: 510 RLKLLLLQHIMEMEEGEKQATMTGNWVQDVSN--IPSAISESLISSACRQSVKFGDLLSK 567
Query: 779 NEMQKILEHLADLNSPWNCPHGRPTMRHL-VDLTTIRKNID 818
EM+ ++ L P+ C HGRPT+ L D+ T ++ D
Sbjct: 568 AEMEYLISQLDKCTLPFQCAHGRPTIVPLEADMMTFTEDED 608
>gi|448655197|ref|ZP_21682049.1| DNA mismatch repair protein MutL [Haloarcula californiae ATCC
33799]
gi|445765646|gb|EMA16784.1| DNA mismatch repair protein MutL [Haloarcula californiae ATCC
33799]
Length = 717
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 86/194 (44%), Gaps = 19/194 (9%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQ--STVLNQQPLLRPLKLDLTP 674
M+++GQ +++ + D L +VDQHAADE+ N+ERL Q L P++L+LT
Sbjct: 519 MRILGQLADTYVVAETDDGLVLVDQHAADERVNYERLKAKFEGETTTQALANPVELELTA 578
Query: 675 EEEVVASMHMDIIRKNGFSLEEDPHALAGLR-FRLKAVPFSKKITFGVEDVKDLISTLAD 733
E V D + GF A G R ++ +P G + V+D++
Sbjct: 579 REAEVFDRRSDALASLGFHT-----ARTGERSVEVRTLPGVIADAAGPDIVRDVLGAFVA 633
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNS 793
E + +L AC S+ +L ++++L L D +
Sbjct: 634 GDDEAAATVEAAA-----------DELLGDLACYPSVTGNTSLTEGSVRELLAALDDCEN 682
Query: 794 PWNCPHGRPTMRHL 807
P+ CPHGRPT+ H+
Sbjct: 683 PYACPHGRPTVIHI 696
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 42/61 (68%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ ++ V RI AG+V++ +S VKELVEN++DA A+ +++ ++ G + +V D+G G
Sbjct: 4 IQRLDDQTVERIAAGEVVERPASVVKELVENAIDADASRVDVVVEAGGTDGIRVTDDGIG 63
Query: 72 I 72
+
Sbjct: 64 M 64
Score = 47.8 bits (112), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 80/206 (38%), Gaps = 42/206 (20%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCK--------------VEGFLSKP 156
T G L++ +++V+G + + V + V G +S P
Sbjct: 197 TFSTTGQGDLRETVMSVYGREVAESMISVGAGSEATGSGNEMDSFPDGPLDGVHGLVSHP 256
Query: 157 GQGSGRNLGDRQYF--FVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACD 213
N R+Y +VN R V V V + Y + +YP A++ VP D
Sbjct: 257 ET----NRAGREYLSTYVNGRYVRAGTVRDAVIDAYGTQIAPDRYPFAVLFLDVPAGDVD 312
Query: 214 VNVTPDKRKVFFSDECSILHA---------LREGLQEIYSPNNASYSVNKVEQL-IEPEK 263
VNV P K +V F+D+ + LREGL +P S EQ I PE
Sbjct: 313 VNVHPRKMEVRFADDEGVREQVRTAVEDALLREGLLRSTAPRGRSAP----EQTEITPES 368
Query: 264 SGPS-SGAESCMFLEQLSPDGNGCIE 288
G + SG E+ +P+G I+
Sbjct: 369 DGATDSGG------ERAAPNGRDAID 388
>gi|448638297|ref|ZP_21676270.1| DNA mismatch repair protein MutL [Haloarcula sinaiiensis ATCC
33800]
gi|445763546|gb|EMA14733.1| DNA mismatch repair protein MutL [Haloarcula sinaiiensis ATCC
33800]
Length = 717
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 86/194 (44%), Gaps = 19/194 (9%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQ--STVLNQQPLLRPLKLDLTP 674
M+++GQ +++ + D L +VDQHAADE+ N+ERL Q L P++L+LT
Sbjct: 519 MRILGQLADTYVVAETDDGLVLVDQHAADERVNYERLKAKFEGETTTQALANPVELELTA 578
Query: 675 EEEVVASMHMDIIRKNGFSLEEDPHALAGLR-FRLKAVPFSKKITFGVEDVKDLISTLAD 733
E V D + GF A G R ++ +P G + V+D++
Sbjct: 579 REAEVFDRRSDALASLGFHT-----ARTGERSVEVRTLPGVIADAAGPDIVRDVLGAFVA 633
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNS 793
E + +L AC S+ +L ++++L L D +
Sbjct: 634 GDDEAAATVEAAA-----------DELLGDLACYPSVTGNTSLTEGSVRELLAALDDCEN 682
Query: 794 PWNCPHGRPTMRHL 807
P+ CPHGRPT+ H+
Sbjct: 683 PYACPHGRPTVIHI 696
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 42/61 (68%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ ++ V RI AG+V++ +S VKELVEN++DA A+ +++ ++ G + +V D+G G
Sbjct: 4 IQRLDDQTVERIAAGEVVERPASVVKELVENAIDADASRVDVVVEAGGTDGIRVTDDGIG 63
Query: 72 I 72
+
Sbjct: 64 M 64
Score = 47.8 bits (112), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 81/206 (39%), Gaps = 42/206 (20%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPV-----AICKSDSCK---------VEGFLSKP 156
T G L++ +++V+G + + V A D V G +S P
Sbjct: 197 TFSTTGQGDLRETVMSVYGREVAESMISVGAGSEATGSGDEMDSFPDGPLDGVHGLVSHP 256
Query: 157 GQGSGRNLGDRQYF--FVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACD 213
N R+Y +VN R V V V + Y + +YP A++ VP D
Sbjct: 257 ET----NRAGREYLSTYVNGRYVRAGTVRDAVIDAYGTQIAPDRYPFAVLFLDVPAGDVD 312
Query: 214 VNVTPDKRKVFFSDECSILHA---------LREGLQEIYSPNNASYSVNKVEQL-IEPEK 263
VNV P K +V F+D+ + LREGL +P S EQ I PE
Sbjct: 313 VNVHPRKMEVRFADDEGVREQVRTAVEDALLREGLLRSTAPRGRSAP----EQTEITPES 368
Query: 264 SGPS-SGAESCMFLEQLSPDGNGCIE 288
G + SG E+ +P+G I+
Sbjct: 369 DGATDSGG------ERAAPNGRDAID 388
>gi|189424059|ref|YP_001951236.1| DNA mismatch repair protein [Geobacter lovleyi SZ]
gi|238692123|sp|B3E5Z2.1|MUTL_GEOLS RecName: Full=DNA mismatch repair protein MutL
gi|189420318|gb|ACD94716.1| DNA mismatch repair protein MutL [Geobacter lovleyi SZ]
Length = 589
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 97/205 (47%), Gaps = 21/205 (10%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTV---LNQQPLLRPLKL 670
F + VIGQF +I+ + + L I+DQHAA E+ FE+L + Q LL P L
Sbjct: 398 FSGLSVIGQFRAAYILCQAEDRLVIIDQHAAYERVRFEQLKAGFATGGIESQRLLLPDTL 457
Query: 671 DLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIST 730
+L+ E +++I+ GF LEE G +R+ AVP ++DL++
Sbjct: 458 ELSFSEADTVRRYLNILEPLGFELEE----FGGQTWRINAVPRIVAEQDHCRLLRDLLAE 513
Query: 731 LADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLAD 790
LA+ QG + + + +LA AC S + L R +M+++L +
Sbjct: 514 LAE-QGSNAHFDQLRDE------------LLARVACHSVVRGSHPLERRQMEELLRAMDR 560
Query: 791 LNSPWNCPHGRPTMRHLVDLTTIRK 815
+ +CPHGRP + H + L + K
Sbjct: 561 TDFSAHCPHGRP-VSHEITLRELEK 584
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 45/65 (69%)
Query: 9 SPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDN 68
+P +R +++ + ++I AG+V++ +S VKEL+EN+LDAGAT I + + G +V DN
Sbjct: 2 APHVRILSESLANKIAAGEVVERPASVVKELIENALDAGATDIRLEISAGGRRLIRVSDN 61
Query: 69 GCGIS 73
G G+S
Sbjct: 62 GHGMS 66
>gi|441650081|ref|XP_003279328.2| PREDICTED: postmeiotic segregation increased 4-like protein-like
[Nomascus leucogenys]
Length = 225
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 49/67 (73%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+PI + VH+IC+G V+ LS+ VKELVENSLDAGAT+I++ LK+YG +V DNGC
Sbjct: 30 IKPIGRKSVHQICSGPVVLSLSTVVKELVENSLDAGATNIDLKLKDYGVHLTEVSDNGCR 89
Query: 72 ISPNNFK 78
NF+
Sbjct: 90 EKEENFE 96
>gi|255655929|ref|ZP_05401338.1| DNA mismatch repair protein [Clostridium difficile QCD-23m63]
gi|296450649|ref|ZP_06892402.1| DNA mismatch repair protein HexB [Clostridium difficile NAP08]
gi|296879234|ref|ZP_06903229.1| DNA mismatch repair protein HexB [Clostridium difficile NAP07]
gi|296260493|gb|EFH07335.1| DNA mismatch repair protein HexB [Clostridium difficile NAP08]
gi|296429777|gb|EFH15629.1| DNA mismatch repair protein HexB [Clostridium difficile NAP07]
Length = 654
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 94/199 (47%), Gaps = 25/199 (12%)
Query: 610 RKEDFGRMKVIGQ-FNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTV---LNQQPLL 665
RK VIG FN I+ K D ++++DQHAA E+ +ER + +N Q LL
Sbjct: 461 RKFSLYGYSVIGVVFNTYIILSKNDS-MYLLDQHAAHERILYERYMEKFYRQDINMQILL 519
Query: 666 RPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVK 725
P+ ++++ + + ++++ K GF LE ++ VP FGV + +
Sbjct: 520 DPVIIEVSNVDMLQIENNLELFMKFGFELE----IFGNNHIMVRCVP----TIFGVPETE 571
Query: 726 DLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKIL 785
I + DN E I S+Y + AS ACRS+I D + E++ +L
Sbjct: 572 KFILQIIDNIEE--ITSNYDLKGE----------RFASMACRSAIKANDKIYDIEIKSLL 619
Query: 786 EHLADLNSPWNCPHGRPTM 804
E L +P+ CPHGRP M
Sbjct: 620 EQLEKCENPFTCPHGRPIM 638
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 66/126 (52%), Gaps = 24/126 (19%)
Query: 20 VHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFKV 79
+++I AG+V++ SS VKEL+ENS+DAGA I I + + G+ ++ DNG GI + +V
Sbjct: 13 INKIAAGEVVERPSSVVKELIENSIDAGANKISIDIIDGGKSLIKITDNGMGIPSS--EV 70
Query: 80 RAVFLCQA----------YALIAKGVRFVCTNTTGKNVKSV--VLKTQGSSSLKDNIITV 127
FL A Y L + G R G+ + S+ V K + ++ KD II
Sbjct: 71 EKSFLRHATSKIKKIDDLYDLYSLGFR-------GEALASISAVSKLEMTTKTKDEII-- 121
Query: 128 FGMNIY 133
G IY
Sbjct: 122 -GTKIY 126
>gi|443893878|dbj|GAC71334.1| hypothetical protein PANT_2d00060 [Pseudozyma antarctica T-34]
Length = 726
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 55/78 (70%), Gaps = 4/78 (5%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR +++ VV+RI AG++I ++A+KEL+ENSLDAGAT I I LKE G + Q+ DNGCG
Sbjct: 21 IRRLDENVVNRIAAGEIIHRPANALKELIENSLDAGATLIRITLKEGGIKMLQIQDNGCG 80
Query: 72 ISPNNFKVRAVFLCQAYA 89
+ P++ LC+ +A
Sbjct: 81 VQPSDLP----LLCERFA 94
>gi|1055354|gb|AAA97458.1| hPMSR2 [Homo sapiens]
Length = 389
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 52/68 (76%), Gaps = 1/68 (1%)
Query: 12 IRPINKGVVHRICAGQVIKDL-SSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
I+PI++ VH+IC+G V+ L +AVKELVENSLDAGAT++++ LK+YG + +V NGC
Sbjct: 163 IKPIDRKSVHQICSGPVVPSLRPNAVKELVENSLDAGATNVDLKLKDYGVDLIEVSGNGC 222
Query: 71 GISPNNFK 78
G+ NF+
Sbjct: 223 GVEEENFE 230
>gi|374323832|ref|YP_005076961.1| DNA mismatch repair protein mutL [Paenibacillus terrae HPL-003]
gi|357202841|gb|AET60738.1| DNA mismatch repair protein mutL [Paenibacillus terrae HPL-003]
Length = 704
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 98/222 (44%), Gaps = 26/222 (11%)
Query: 587 QPENEERKARALAAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADE 646
+P A LA + E L F + +IGQ + ++I + DQ L+++DQHAA E
Sbjct: 489 KPRQSRLNAEQLAVVSGEAPEL---PAFPELNLIGQHHGTYLIAQNDQGLYLIDQHAAHE 545
Query: 647 KYN----FERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALA 702
+ N +E+ ++Q+ LL P+ L+ TP E + + G LE
Sbjct: 546 RVNYEFYYEKFGNPEAVSQE-LLLPITLEFTPSETEKLKTRLHWFEQAGVYLEH----FG 600
Query: 703 GLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLA 762
G FR+ + P+ + G E D+I +A + I K+ A S+ S
Sbjct: 601 GQTFRVSSYPY--WLPQGEE--ADVIEEMAGWVLDEKAIDLAKLREAASIMCS------- 649
Query: 763 SRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTM 804
CR+SI L + +LE LA P+ CPHGRP +
Sbjct: 650 ---CRASIKANQKLTDRQAVVLLERLAACRQPYTCPHGRPIV 688
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 53/83 (63%), Gaps = 2/83 (2%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR +++ + ++I AG+V++ +S VKELVEN++DAG T +++ ++E G + +V DNG G
Sbjct: 4 IRVLDEHIANQIAAGEVVERPASVVKELVENAIDAGGTRVDVWVEEGGLQSIRVTDNGSG 63
Query: 72 ISPNNFKVRAVFLCQAYALIAKG 94
I P + V F A + I G
Sbjct: 64 IEPED--VETAFYRHATSKIGHG 84
>gi|239636984|ref|ZP_04677978.1| DNA mismatch repair protein MutL [Staphylococcus warneri L37603]
gi|239597334|gb|EEQ79837.1| DNA mismatch repair protein MutL [Staphylococcus warneri L37603]
Length = 649
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 103/226 (45%), Gaps = 29/226 (12%)
Query: 582 TLELSQPENEERKARALAAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQ 641
TLE + +NE ++A+T + M+V+GQ + +II + + +F++DQ
Sbjct: 434 TLEQEENQNENDIKGTVSAST--------RRRVPYMEVVGQVHGTYIIAQNENGMFMIDQ 485
Query: 642 HAADE--KYNFERLSQSTVLNQ-QPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDP 698
HAA E KY + R V N+ Q LL P+ + +E+ + + + + + G LE
Sbjct: 486 HAAQERIKYEYFREKIGEVTNEVQNLLIPMTFHFSKDEQFIIDQYQEELDRVGVHLEH-- 543
Query: 699 HALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVR 758
G + + + P E +KD+I + +N+ I KM ++ S
Sbjct: 544 --FGGHDYIVNSYPVWFPKAEAEEIIKDMIELVLENKK----IDVKKMREDAAIMMS--- 594
Query: 759 AMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTM 804
C+ SI L NEM +++ L ++ P+ CPHGRP +
Sbjct: 595 -------CKKSIKANHYLKNNEMADLIDQLREMEDPFTCPHGRPII 633
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 44/66 (66%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ + + ++I AG+V++ SS VKEL+EN++DA +T I I +++ G +VVDNG G
Sbjct: 4 IKELQTSLANKIAAGEVVERPSSVVKELLENAIDAQSTEINIEVEQSGVASIRVVDNGTG 63
Query: 72 ISPNNF 77
I ++
Sbjct: 64 IEADDL 69
Score = 42.7 bits (99), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 8/136 (5%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYF 170
+LKT GS + + ++GM + L + SD +EG++++P ++ Y
Sbjct: 195 LLKTNGSGKTNEVMAEIYGMKVAKDLVHITGDTSD-YHLEGYVARPEHSRS----NKHYI 249
Query: 171 --FVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSD 227
F+N R + ++K + E Y + +YPI +N + DVNV P K +V S
Sbjct: 250 SIFINGRYIKNFVLNKAIVEGYHTLLTIGRYPICYINIQMDPILVDVNVHPTKLEVRLSK 309
Query: 228 ECSILHALREGLQEIY 243
E + + E ++E +
Sbjct: 310 EEQLYDLIVEKIREAF 325
>gi|270308366|ref|YP_003330424.1| MutL/HexB family DNA mismatch repair protein [Dehalococcoides sp.
VS]
gi|270154258|gb|ACZ62096.1| DNA mismatch repair protein, MutL/HexB family [Dehalococcoides sp.
VS]
Length = 566
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 100/204 (49%), Gaps = 27/204 (13%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERL-SQSTVLN-QQPLLRPLKLDLTP 674
++++GQ +++ + L+I+DQHAA E+ +E + SQ N +Q LL P L+L P
Sbjct: 384 LRLVGQIGGLYLLAEGPDGLYIIDQHAAHERIRYEEIASQIPSENARQSLLEPFILELNP 443
Query: 675 EEEVVASMHMDIIRKNGFSLEEDPHALAGLR-FRLKAVPFSKKITFGVEDVKDLISTLAD 733
+E + + GF +EE G R FR++++P F K L+S L D
Sbjct: 444 VQEAMIEKCKSELDLMGFEIEE-----FGRRVFRVQSIPAG----FTAPQAKALLSELVD 494
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNS 793
N + A + R+R ++A C +++ G L EM+++L L
Sbjct: 495 NPKD-----------APAEIKERLRRLMA---CHTAVRAGQVLTEAEMRELLLKLEKTAV 540
Query: 794 PWNCPHGRPTMRHLVDLTTIRKNI 817
P +CPHGRPT+ +D + + K+
Sbjct: 541 PGHCPHGRPTIVK-IDFSQLEKDF 563
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 45/61 (73%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ ++K + RI AG+VI+ SS VKEL+ENSLDAGA +++ ++E G + +V D+GCG
Sbjct: 3 IKLLDKTTIARIAAGEVIERPSSVVKELLENSLDAGAKRVDVVIREGGIGYIEVSDDGCG 62
Query: 72 I 72
I
Sbjct: 63 I 63
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 81/163 (49%), Gaps = 14/163 (8%)
Query: 78 KVRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLE 137
KV V L +YAL V+F + G+N L T G+ L+D ++ ++G ++ + +
Sbjct: 169 KVSEVVL--SYALAYPEVKFTLS-IDGRNT----LNTPGNGKLRDAVLEIYGNDVASKML 221
Query: 138 PVAI--CKSDSCKVEGFLSKPG-QGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGA- 193
+ +S S + G +S P S RN +FFVN R + + K V + Y G
Sbjct: 222 DLETDSYRSSSINISGLVSPPEISRSNRN---SLHFFVNRRLIQSRALQKAVEQAYSGLL 278
Query: 194 NSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALR 236
+YP+ ++N + DVN+ P K +V FSDE ++ +++
Sbjct: 279 IVGRYPMGVINIWLDGALVDVNIHPTKAEVKFSDENAVFTSVQ 321
>gi|99079943|ref|YP_612097.1| DNA mismatch repair protein [Ruegeria sp. TM1040]
gi|99036223|gb|ABF62835.1| DNA mismatch repair protein MutL [Ruegeria sp. TM1040]
Length = 644
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 55/79 (69%), Gaps = 2/79 (2%)
Query: 3 VETPTNS--PTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGE 60
+E P P IR ++ G ++RI AG+V++ +SAVKELVEN++DAGAT I + + + G+
Sbjct: 14 IEAPAKPARPVIRQLDDGAINRIAAGEVVERPASAVKELVENAIDAGATRITVEIADGGK 73
Query: 61 EWFQVVDNGCGISPNNFKV 79
+V+DNGCG++P + +
Sbjct: 74 TLIRVIDNGCGMTPEDLPL 92
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 81/190 (42%), Gaps = 20/190 (10%)
Query: 621 GQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLN---QQPLLRPLKLDLTPEEE 677
GQ + +II + + IVDQHAA E+ +ERL + N Q LL P ++L+ +
Sbjct: 460 GQVHENYIIAQTRDGMVIVDQHAAHERLVYERLKRQLAENGVATQGLLIPEIIELSDGDC 519
Query: 678 VVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGE 737
+ + + G +E A G ++ P ++D++ LAD QGE
Sbjct: 520 ARLLEVAEDLARLGLGIE----AFGGSAVAVRETPAILGEVNAEAMIRDILDELAD-QGE 574
Query: 738 CSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNC 797
++ + R+ A+L+ AC SI G + EM +L + C
Sbjct: 575 SQLVQA------------RLEAILSRVACHGSIRSGRRMRGEEMNALLREMEQTPHSGQC 622
Query: 798 PHGRPTMRHL 807
HGRPT L
Sbjct: 623 NHGRPTYVEL 632
>gi|418411716|ref|ZP_12984982.1| DNA mismatch repair protein mutL [Staphylococcus epidermidis
BVS058A4]
gi|410891299|gb|EKS39096.1| DNA mismatch repair protein mutL [Staphylococcus epidermidis
BVS058A4]
Length = 645
Score = 78.6 bits (192), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 95/192 (49%), Gaps = 23/192 (11%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADE--KYNFERLSQSTVLNQ-QPLLRPLKLDLT 673
M+++GQ + +II + + +F++DQHAA E KY + R V N+ Q LL PL +
Sbjct: 457 MEIVGQVHGTYIIAQNENGMFMIDQHAAQERIKYEYFREKIGEVTNEVQNLLIPLTFHFS 516
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
+E+++ + D + K G LE G + + + P I F E+ +++I + +
Sbjct: 517 KDEQMIIDQYKDELDKVGVHLEH----FGGHDYIVNSYP----IWFPKEEAEEIIKDMIE 568
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLA-SRACRSSIMIGDALGRNEMQKILEHLADLN 792
++ +K SV ++R A +C+ SI L NEM +++ L +
Sbjct: 569 ------LVLKHK-----SVDVKKIREDAAIMMSCKKSIKANHYLKNNEMADLIDQLREAE 617
Query: 793 SPWNCPHGRPTM 804
P+ CPHGRP +
Sbjct: 618 DPFTCPHGRPII 629
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 46/68 (67%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ + + ++I AG+V++ SS VKEL+EN++DA AT I I +++ G +VVDNG G
Sbjct: 4 IKELETSLANKIAAGEVVERPSSVVKELLENAIDAQATEINIEVEQSGVSSIRVVDNGTG 63
Query: 72 ISPNNFKV 79
I+ + ++
Sbjct: 64 IAQEDLEL 71
Score = 40.8 bits (94), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 75/164 (45%), Gaps = 16/164 (9%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYF 170
+L T GS + + ++GM + L ++ SD +EGF++KP ++ Y
Sbjct: 195 LLSTNGSGRTNEVMAEIYGMKVAKDLVHISGDTSD-YHLEGFVAKPEHSRS----NKHYI 249
Query: 171 --FVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSD 227
F+N R + ++K + E Y + ++PI +N + DVNV P K +V S
Sbjct: 250 SIFINGRYIKNFVLNKAILEGYHTLLTIGRFPICYINIQMDPILVDVNVHPTKLEVRLSK 309
Query: 228 ECS----ILHALREGLQE-IYSPNNASYSV---NKVEQLIEPEK 263
E I+ +RE ++ I P N V NKV + E +K
Sbjct: 310 EDQLYDLIVTKIREAFKDKILIPQNDLNHVPKKNKVLETFEQQK 353
>gi|420163367|ref|ZP_14670114.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM095]
gi|420167654|ref|ZP_14674306.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM087]
gi|394235056|gb|EJD80630.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM095]
gi|394237682|gb|EJD83168.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM087]
Length = 645
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 95/192 (49%), Gaps = 23/192 (11%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADE--KYNFERLSQSTVLNQ-QPLLRPLKLDLT 673
M+++GQ + +II + + +F++DQHAA E KY + R V N+ Q LL PL +
Sbjct: 457 MEIVGQVHGTYIIAQNENGMFMIDQHAAQERIKYEYFREKIGEVTNEVQNLLIPLTFHFS 516
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
+E+++ + D + K G LE G + + + P I F E+ +++I + +
Sbjct: 517 KDEQMIIDQYKDELDKVGVHLEH----FGGHDYIVNSYP----IWFPKEEAEEIIKDMIE 568
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLA-SRACRSSIMIGDALGRNEMQKILEHLADLN 792
++ +K SV ++R A +C+ SI L NEM +++ L +
Sbjct: 569 ------LVLKHK-----SVDVKKIREDAAIMMSCKKSIKANHYLKNNEMADLIDQLREAE 617
Query: 793 SPWNCPHGRPTM 804
P+ CPHGRP +
Sbjct: 618 DPFTCPHGRPII 629
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 43/62 (69%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ + + ++I AG+V++ SS VKEL+EN++DA AT I I +++ G +VVDNG G
Sbjct: 4 IKELETSLANKIAAGEVVERPSSVVKELLENAIDAQATEINIEVEQSGVSSIRVVDNGTG 63
Query: 72 IS 73
I+
Sbjct: 64 IA 65
Score = 40.8 bits (94), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 75/164 (45%), Gaps = 16/164 (9%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYF 170
+L T GS + + ++GM + L ++ SD +EGF++KP ++ Y
Sbjct: 195 LLSTNGSGRTNEVMAEIYGMKVAKDLVHISGDTSD-YHLEGFVAKPEHSRS----NKHYI 249
Query: 171 --FVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSD 227
F+N R + ++K + E Y + ++PI +N + DVNV P K +V S
Sbjct: 250 SIFINGRYIKNFVLNKAILEGYHTLLTIGRFPICYINIQMDPILVDVNVHPTKLEVRLSK 309
Query: 228 ECS----ILHALREGLQE-IYSPNNASYSV---NKVEQLIEPEK 263
E I+ +RE ++ I P N V NKV + E +K
Sbjct: 310 EDQLYDLIVTKIREAFKDKILIPQNDLNHVPKKNKVLETFEQQK 353
>gi|291519453|emb|CBK74674.1| DNA mismatch repair protein MutL [Butyrivibrio fibrisolvens 16/4]
Length = 632
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 99/200 (49%), Gaps = 21/200 (10%)
Query: 608 LFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQ---QPL 664
KE K+IGQ + I + D++++I+DQHAA EK FE+ NQ Q +
Sbjct: 435 FLNKEAVKEHKIIGQVFDTYWIVEYDKNMYIIDQHAAHEKVLFEKTMARLKNNQMTSQMI 494
Query: 665 LRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDV 724
P+ + L+P++ ++ + + K G+ +E + G + +P + ++
Sbjct: 495 SPPVIVSLSPQDVLLFENYREAFEKLGYRVE----SFGGNELAINGIPGN---LLNLDPK 547
Query: 725 KDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKI 784
+ LAD Q SYK + + RV AS +C++++ + L E++ +
Sbjct: 548 AFFLEVLADCQ-------SYKASDSFDMIIERV----ASMSCKAAVKGNNRLSIPEIKTL 596
Query: 785 LEHLADLNSPWNCPHGRPTM 804
++ L +L +P++CPHGRPTM
Sbjct: 597 IDDLLELENPYHCPHGRPTM 616
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 64/109 (58%), Gaps = 9/109 (8%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I +++ + +I AG+V++ +S KEL+ENS+DAGAT+I + +K G E+ ++ DNG G
Sbjct: 4 INLLSQETIDKIAAGEVVERPASVAKELIENSIDAGATAISVEIKGGGIEYLRITDNGSG 63
Query: 72 ISPNNFKVRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSL 120
I + +++ FL + + I+ V NV+S+ + + SS+
Sbjct: 64 IDKD--QIQIAFLRHSTSKISSAVDL-------DNVRSLGFRGEALSSI 103
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 60/131 (45%), Gaps = 4/131 (3%)
Query: 112 LKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFF 171
L T G+ +L D I ++G I + + + + + GF+ + G ++FF
Sbjct: 197 LMTSGNGTLSDTIYQIYGRQIASNVLDIEYV-DEKVSITGFIGQSVIARGNRA--FEHFF 253
Query: 172 VNDRPVDLPKVSKLVNELYKG-ANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECS 230
VN R + +S+ E Y G QYP ++N A DVNV P K++V F +E
Sbjct: 254 VNSRYIKSNNLSRACEEGYYGFLMGHQYPFFVINIAFTDSAVDVNVHPTKQEVRFENESE 313
Query: 231 ILHALREGLQE 241
+ L + + +
Sbjct: 314 VCQLLTKTINQ 324
>gi|409723405|ref|ZP_11270657.1| DNA mismatch repair protein MutL [Halococcus hamelinensis 100A6]
gi|448722522|ref|ZP_21705056.1| DNA mismatch repair protein MutL [Halococcus hamelinensis 100A6]
gi|445789247|gb|EMA39936.1| DNA mismatch repair protein MutL [Halococcus hamelinensis 100A6]
Length = 701
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 100/209 (47%), Gaps = 25/209 (11%)
Query: 602 TTELERLFRKEDFGRM---KVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTV 658
T + +R+ DF R+ +V+GQ + +++ + L +VDQHAADE+ N+ERL +
Sbjct: 486 TLDGDRVADDADFDRLPPLRVLGQLHDTYVVCESPDGLLLVDQHAADERVNYERLRERFA 545
Query: 659 LNQ--QPLLRPLKLDLTP-EEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSK 715
+ Q L P++++LTP E E+ A +ALAGL FR
Sbjct: 546 GDTGIQRLSSPIEIELTPAESELFAEFE---------------NALAGLGFRADLDDGRV 590
Query: 716 KITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDA 775
++T V +++ AD + +S+ + V + A+LA AC S+ +
Sbjct: 591 EVTA----VPAVLAGAADPELLRDALSALVRGKDEDVVEASADALLADLACYPSVTGNTS 646
Query: 776 LGRNEMQKILEHLADLNSPWNCPHGRPTM 804
L + ++L L +P+ CPHGRP +
Sbjct: 647 LTEGSVMELLASLDACENPYACPHGRPVV 675
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR +++ + RI AG+V++ +S VKELVENSLDA A+ + + ++ G++ +V D+G G
Sbjct: 9 IRRLDQSTIERIAAGEVVERPASVVKELVENSLDADASRVRVTVERGGKDGIRVADDGTG 68
Query: 72 ISPNNFKVRAV 82
++ N + RAV
Sbjct: 69 MTRENVE-RAV 78
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 60/136 (44%), Gaps = 8/136 (5%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCK-----VEGFLSKPGQGSGRNLG 165
V T G SL+ I++V+G + + PV +D V G +S P + R
Sbjct: 202 VFSTTGQGSLEATILSVYGREVAEAMVPVDGDGADLPDGPLDGVTGVVSHPE--TNRASP 259
Query: 166 DRQYFFVNDRPVDLPKVSKLVNELYKGA-NSRQYPIAIMNFIVPTRACDVNVTPDKRKVF 224
+ F+N R V V V E Y G +YP A++ + + DVNV P K +V
Sbjct: 260 EHCSTFINGRYVTARAVRDAVVEAYGGQLAPDRYPFAVVFLSISPESVDVNVHPRKLEVR 319
Query: 225 FSDECSILHALREGLQ 240
F+DE ++ ++
Sbjct: 320 FADESGATEQVKSAVE 335
>gi|309792273|ref|ZP_07686745.1| DNA mismatch repair protein MutL [Oscillochloris trichoides DG-6]
gi|308225814|gb|EFO79570.1| DNA mismatch repair protein MutL [Oscillochloris trichoides DG6]
Length = 609
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 92/191 (48%), Gaps = 22/191 (11%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERL---SQSTVLNQQPLLRPLKLDLT 673
++V+GQ L +I+ + + ++++DQHAA E+ +ERL S + Q LL PL + L
Sbjct: 422 LRVVGQVGLTYIVAEAPEGMYLIDQHAAHERITYERLMTQRASGAIESQGLLLPLVVPLA 481
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
P + + D + GF+LEE G+R R S T +++ ++ LAD
Sbjct: 482 PASSALLLGYPDELAALGFTLEEWGE---GVRVR------SAPATLPSDEIAPALTELAD 532
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNS 793
+ S R +L + AC +S+ G AL EM+++L L S
Sbjct: 533 ----------HLAGRGGSTPSDRYEEILITLACHTSVRAGQALSHEEMRQLLRQLEACIS 582
Query: 794 PWNCPHGRPTM 804
P CPHGRPTM
Sbjct: 583 PRTCPHGRPTM 593
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 46/68 (67%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR ++ + +I AG+V++ +S +KELVEN+LDAGA+ I I ++ G +V D+GCG
Sbjct: 3 IRLLDATIAAQIAAGEVVERPASVIKELVENALDAGASRITIEVRGGGLRELKVQDDGCG 62
Query: 72 ISPNNFKV 79
I+ + ++
Sbjct: 63 IASHEVEL 70
>gi|325289885|ref|YP_004266066.1| DNA mismatch repair protein mutL [Syntrophobotulus glycolicus DSM
8271]
gi|324965286|gb|ADY56065.1| DNA mismatch repair protein mutL [Syntrophobotulus glycolicus DSM
8271]
Length = 663
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 93/195 (47%), Gaps = 22/195 (11%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQS----TVLNQQPLLRPLK 669
G ++ +GQ +I+ DQ L+I+DQHAA E+ E+L +S T +Q LL
Sbjct: 470 LGNLRALGQIMGTYILATDDQSLYIIDQHAAHERITVEKLYRSFQKDTPDSQLLLLPITL 529
Query: 670 LDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIS 729
EE++V S + ++ RK+GF LE+ + L+ VP K + E I
Sbjct: 530 TLSVHEEQIVLS-NFELFRKSGFILEQ----FGDRTYLLRGVPLIKNLDKPEEIFLSFID 584
Query: 730 TLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLA 789
L ++ S+ + + + + ACR+SI D L +MQ +L +L+
Sbjct: 585 ELMKDRTTVSL-------------ENIIEKWIFTAACRNSIKGNDYLSIPDMQALLFNLS 631
Query: 790 DLNSPWNCPHGRPTM 804
+P+ CPHGRP +
Sbjct: 632 RAENPYTCPHGRPVI 646
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 88/199 (44%), Gaps = 18/199 (9%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICK 143
+ AL VRF+ K+ K V + G SL+ I +V G I L PV+ C
Sbjct: 175 MVSKLALTKPAVRFIL-----KHAKHTVFMSPGDGSLRHVIASVMGSQIAQKLVPVSFC- 228
Query: 144 SDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLV-NELYKGANSRQYPIAI 202
++ V G+LS P RN G+ Q +N R + ++ + V N + YPI +
Sbjct: 229 NEHYAVSGYLSMPDLT--RNNGNYQVLMINGRIIRSKQLRQAVKNSFHTLIPHNTYPIVV 286
Query: 203 MNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASYSVNKVEQL-IEP 261
+N + DVNV P K ++ F E ++ L L N A K+E++ + P
Sbjct: 287 LNIELSPSLYDVNVHPSKMEIKFKQENELMTFLTAQL------NKAVLDGRKIERIDLHP 340
Query: 262 EKSGPSSGAESCMFLEQLS 280
G E+ +FL ++S
Sbjct: 341 PAFG--QAKETSLFLNEIS 357
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 45/67 (67%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ +N+ +++I AG+V++ S VKELVENSLDAGA IEI ++ G +V D+G G
Sbjct: 5 IKILNQLCINQIAAGEVVERPLSVVKELVENSLDAGAEHIEITVEGNGTALIRVRDDGSG 64
Query: 72 ISPNNFK 78
I+P +
Sbjct: 65 IAPEELQ 71
>gi|315646576|ref|ZP_07899694.1| DNA mismatch repair protein MutL [Paenibacillus vortex V453]
gi|315278219|gb|EFU41539.1| DNA mismatch repair protein MutL [Paenibacillus vortex V453]
Length = 660
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 87/194 (44%), Gaps = 21/194 (10%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQS---TVLNQQPLLRPLKL 670
F + +IGQ + ++I + D L+++DQHAA E+ N+E + Q LL P+ L
Sbjct: 469 FPELTLIGQHHGTYLIAQNDSGLYLIDQHAAHERINYEYYYEQFGKPADASQELLLPITL 528
Query: 671 DLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIST 730
+ TP E + K G +E G F +++ PF F D K +I
Sbjct: 529 EFTPSESEKVKQRLHWFEKVGVYME----FFGGQTFLVRSHPF----WFPKGDEKAIIEE 580
Query: 731 LADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLAD 790
+A+ ++S +D A S + +C++SI L E +++ L D
Sbjct: 581 MAE-----WVLSERNIDVAKLRETSSIMC-----SCKASIKANQKLTEQEAMTLIQRLGD 630
Query: 791 LNSPWNCPHGRPTM 804
P+ CPHGRP +
Sbjct: 631 CRQPYTCPHGRPIV 644
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 54/83 (65%), Gaps = 2/83 (2%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR +++ + ++I AG+V++ +S VKELVEN++DAG+T I++ ++E G + +V DNG G
Sbjct: 4 IRILDEHIANQIAAGEVVERPASVVKELVENAIDAGSTKIDVTVEEGGLDSIRVTDNGAG 63
Query: 72 ISPNNFKVRAVFLCQAYALIAKG 94
I P + F A + I +G
Sbjct: 64 IDPED--CETAFYRHATSKITEG 84
>gi|354582778|ref|ZP_09001679.1| DNA mismatch repair protein MutL [Paenibacillus lactis 154]
gi|353199070|gb|EHB64536.1| DNA mismatch repair protein MutL [Paenibacillus lactis 154]
Length = 659
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 110/265 (41%), Gaps = 39/265 (14%)
Query: 560 SIMQSSCHTSGSVK--------MRRCFAAATLELSQPENEERKARALAAATTELERLFRK 611
S+ +S +SG K MR AAA S+P E+R A +A + + +
Sbjct: 398 SLQESVTGSSGDYKEWTAQQPQMRETAAAAAYP-SKPSYEDRAADRRSANVPAVTKEWMA 456
Query: 612 E---------DFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQS---TVL 659
F ++ IGQ + +II + + L+++DQHAA E+ N+E +
Sbjct: 457 AASGPAPDIPPFPQLTYIGQHHGTYIIAQNETGLYLIDQHAAHERINYEYYYEQFGKPAD 516
Query: 660 NQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITF 719
Q LL P+ L+ TP E + K G +E G F +++ PF F
Sbjct: 517 ASQELLLPITLEFTPSETEKVKERLHWFEKAGVYME----FFGGNTFLVRSHPF----WF 568
Query: 720 GVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRN 779
D K LI +A+ I K+ A S+ S C++SI L
Sbjct: 569 PKGDEKALIEEMAEWVLNERHIDIAKLREASSIMCS----------CKASIKANQKLTEQ 618
Query: 780 EMQKILEHLADLNSPWNCPHGRPTM 804
E ++ LA+ P+ CPHGRP +
Sbjct: 619 EAMTLIRRLAECRQPYTCPHGRPIV 643
Score = 66.6 bits (161), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 57/83 (68%), Gaps = 2/83 (2%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR +++ + ++I AG+V++ +S VKELVEN++DAG+T I++A++E G + +V DNG G
Sbjct: 4 IRVLDEHIANQIAAGEVVERPASVVKELVENAIDAGSTRIDVAVEEGGLDSIRVTDNGSG 63
Query: 72 ISPNNFKVRAVFLCQAYALIAKG 94
I P++ F A + IA+G
Sbjct: 64 IDPDD--CETAFYRHATSKIAEG 84
Score = 39.3 bits (90), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 78/189 (41%), Gaps = 18/189 (9%)
Query: 109 SVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQ 168
+ +L+T G+ I ++G + + D ++G++S+P G
Sbjct: 194 NTLLQTLGNGDALQVIAAIYGTQSAKAMMKIEAENMDYT-LQGYISRPDFTRANRNG--M 250
Query: 169 YFFVNDRPVDLPKVSKLVNELYKGANS----RQYPIAIMNFIVPTRACDVNVTPDKRKVF 224
VN R + + L+ + KG ++ +YP+ ++ + DVNV P K +V
Sbjct: 251 SLIVNGRYI---RNYGLMQAVLKGYHTLLPINRYPLVVLQLSMHPSLIDVNVHPSKLEVR 307
Query: 225 FSDECSILHALREGL-----QEIYSPNNASYSVNKVEQLIEPEK---SGPSSGAESCMFL 276
FS E + + E + QEI P A ++ K + E+ PS GA +
Sbjct: 308 FSKEPELFSFIEEAVRNVLRQEILIPRPAKQTIGKSDNAFIQEQLNFPAPSYGAPARGER 367
Query: 277 EQLSPDGNG 285
++ DG G
Sbjct: 368 AEIPQDGLG 376
>gi|345858094|ref|ZP_08810507.1| DNA mismatch repair MutL family protein [Desulfosporosinus sp. OT]
gi|344328899|gb|EGW40264.1| DNA mismatch repair MutL family protein [Desulfosporosinus sp. OT]
Length = 673
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 99/224 (44%), Gaps = 21/224 (9%)
Query: 585 LSQPENEERKARALAAATTELERLFRKED-FGRMKVIGQFNLGFIIGKLDQDLFIVDQHA 643
++QP+ E + L + + ED + + Q +I+ + L ++DQHA
Sbjct: 452 INQPQAEPNLLKDLDQDDLPAQDELQTEDILSHLWPLAQLFNTYILATDGKILLMIDQHA 511
Query: 644 ADEKYNFERL---SQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHA 700
A E+ N+ERL ++ Q LL PL ++ T +EE H+ I+ + GF LE+
Sbjct: 512 AHERINYERLLAEFKAAERTSQALLIPLPMEFTLQEEQALLEHLWILTEMGFVLEQ---- 567
Query: 701 LAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAM 760
+ L+ VP E ++ I + S D + + +
Sbjct: 568 FGSRTYLLRGVPVQTGTFPADEMLRQFIEEVLQKNSTPSF---------DKLLEEWIHML 618
Query: 761 LASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTM 804
AC+ SI D+L EM++++ L ++P+ CPHGRPTM
Sbjct: 619 ----ACKESIKAQDSLSLLEMEQLIAQLGKTDNPYTCPHGRPTM 658
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 63/123 (51%), Gaps = 4/123 (3%)
Query: 110 VVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQY 169
VVL+T G L++ I + G I L P+ + D ++EGF+S P R+ Q
Sbjct: 196 VVLQTSGRGDLRETIGAILGHTIARQLIPLNAQQED-WQIEGFISPPDLV--RSSKQAQT 252
Query: 170 FFVNDRPVDLPKVSKLVNELYKG-ANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDE 228
F +N R V P +S+ + + Y ++ +P+ +++ VP DVNV P K V F +E
Sbjct: 253 FMINGRIVRSPFLSRALEDGYHTLIPAKLHPVVVLHLHVPPSEYDVNVHPTKMDVRFKNE 312
Query: 229 CSI 231
++
Sbjct: 313 PAL 315
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 47/74 (63%)
Query: 9 SPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDN 68
+P I ++ ++I AG+V++ S VKELVEN+LDAGA I+I ++ G +V D+
Sbjct: 2 TPVIHILDAHSANQIAAGEVVERPVSVVKELVENALDAGAKHIDITIEGNGVPLIRVRDD 61
Query: 69 GCGISPNNFKVRAV 82
GCGI+ ++ + +
Sbjct: 62 GCGIAISDLPLSVI 75
>gi|242373589|ref|ZP_04819163.1| DNA mismatch repair protein MutL [Staphylococcus epidermidis
M23864:W1]
gi|242348952|gb|EES40554.1| DNA mismatch repair protein MutL [Staphylococcus epidermidis
M23864:W1]
Length = 656
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 94/192 (48%), Gaps = 23/192 (11%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADE--KYNFERLSQSTVLNQ-QPLLRPLKLDLT 673
M+V+GQ + +II + + +F++DQHAA E KY + R V N+ Q LL PL +
Sbjct: 468 MEVVGQVHGTYIIAQNENGMFMIDQHAAQERIKYEYFREKIGEVTNEVQNLLIPLTFHFS 527
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
+E+++ + D + + G LE G + + + P E +KD+I+ + +
Sbjct: 528 KDEQMIIDQYQDELDRVGVHLEH----FGGHDYIVNSYPVWFPKGDAEEIIKDMINLVLE 583
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLA-SRACRSSIMIGDALGRNEMQKILEHLADLN 792
++ K+D ++R +A +C+ SI L NEM +++ L +
Sbjct: 584 HK---------KVDV------KKIREEVAIMMSCKKSIKANHYLKNNEMSDLIDQLREAE 628
Query: 793 SPWNCPHGRPTM 804
P+ CPHGRP +
Sbjct: 629 DPFTCPHGRPII 640
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 44/66 (66%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ + + ++I AG+V++ SS VKEL+EN++DA +T I + +++ G +VVDNG G
Sbjct: 4 IKELQTSLANKIAAGEVVERPSSVVKELLENAIDAESTEINVEVEQSGVASIRVVDNGTG 63
Query: 72 ISPNNF 77
I ++
Sbjct: 64 IEQDDL 69
Score = 41.6 bits (96), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 8/136 (5%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYF 170
++ T GS + + ++GM + L ++ SD +EGF++KP ++ Y
Sbjct: 195 LISTNGSGRTNEVMAEIYGMKVAKDLVHISGDTSD-YHLEGFVAKPEHSRS----NKHYI 249
Query: 171 --FVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSD 227
F+N R + ++K + E Y + +YPI +N + DVNV P K +V S
Sbjct: 250 SIFINGRYIKNFLLNKAIIEGYHTLLTIGRYPICYINIQMDPILVDVNVHPTKLEVRLSK 309
Query: 228 ECSILHALREGLQEIY 243
E + + E ++E +
Sbjct: 310 EEQLFALIVEKIREAF 325
>gi|448398980|ref|ZP_21570325.1| DNA mismatch repair protein MutL [Haloterrigena limicola JCM 13563]
gi|445670052|gb|ELZ22657.1| DNA mismatch repair protein MutL [Haloterrigena limicola JCM 13563]
Length = 727
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 93/191 (48%), Gaps = 18/191 (9%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLN--QQPLLRPLKLDLTP 674
++V+GQ + +++ + L ++DQHAADE+ N+ERL + + Q L P++L+LT
Sbjct: 531 LRVLGQLHDTYLVCETPDGLVLIDQHAADERVNYERLQDAFADDPTAQALAEPVELELTA 590
Query: 675 EEEVVASMHMDIIRKNGFSLEE-DPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
E + + + + GF + D +A + VP + T + ++D+++ D
Sbjct: 591 AEAEAFEHYREALSRLGFYADRVDDRTIA-----VTTVPAVLEETLEPDRLRDVLTAFVD 645
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNS 793
E +T D++ L AC SI +L + ++LE L D +
Sbjct: 646 GDDEAG------AETVDALADQ----FLGDLACYPSITGNTSLTEGSVIELLEALDDCEN 695
Query: 794 PWNCPHGRPTM 804
P++CPHGRP +
Sbjct: 696 PYSCPHGRPVL 706
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 52/75 (69%), Gaps = 1/75 (1%)
Query: 6 PTNSPT-IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQ 64
P++ T I +++ V RI AG+V++ +SAVKELVENSLDA A+S+++ +++ G E +
Sbjct: 7 PSDGETEIHQLDEDTVARIAAGEVVERPASAVKELVENSLDADASSVDVTVEDGGTELIR 66
Query: 65 VVDNGCGISPNNFKV 79
V D+G G+S + +
Sbjct: 67 VADDGHGMSEADLRA 81
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 56/134 (41%), Gaps = 22/134 (16%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSC------KVEGFLSKPGQGSGRNL 164
V T G L+ +++V+G + + + PV D V G +S P N
Sbjct: 208 VFSTTGQGDLQAAVLSVYGREVASAMIPVE-ADGDELPPGPLESVSGLVSHPET----NR 262
Query: 165 GDRQYF--FVNDRPVDLPKVSKLVNELYKGANSRQ-----YPIAIMNFIVPTRACDVNVT 217
R Y +VN R V + V E GA Q YP + VP A DVNV
Sbjct: 263 SSRDYLATYVNGRAV----TADAVREGIMGAYGTQLGGDRYPFVTLFLEVPGDAVDVNVH 318
Query: 218 PDKRKVFFSDECSI 231
P KR+V F D+ ++
Sbjct: 319 PRKREVRFDDDDAV 332
>gi|225378111|ref|ZP_03755332.1| hypothetical protein ROSEINA2194_03771 [Roseburia inulinivorans DSM
16841]
gi|225210112|gb|EEG92466.1| hypothetical protein ROSEINA2194_03771 [Roseburia inulinivorans DSM
16841]
Length = 647
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 97/193 (50%), Gaps = 23/193 (11%)
Query: 616 RMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFER----LSQSTVLNQQPLLRPLKLD 671
+ K+IGQ + + + + LFI+DQHAA EK +ER +S+ T Q + P+ L
Sbjct: 458 KHKIIGQLFDTYWLIEYEDKLFIIDQHAAHEKVLYERTMKKISEKT-FTSQTISPPIILT 516
Query: 672 LTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTL 731
L +E V ++ + + F E +P G + + A+P F D+K + +
Sbjct: 517 LNQDE--VQALETYEAQLSMFGYEIEP--FGGKEYAITAIP----ADFTDIDMKTMFIEM 568
Query: 732 ADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADL 791
D+ S P+ + +AS +C++++ + L R E++ +++ L +L
Sbjct: 569 LDDFANIS----------GKDAPNLIMEKVASMSCKAAVKGNNHLSRPEIEALIDELLEL 618
Query: 792 NSPWNCPHGRPTM 804
++P+NCPHGRPT+
Sbjct: 619 DNPYNCPHGRPTI 631
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 45/63 (71%)
Query: 10 PTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNG 69
P I +N+ + +I AG+V++ SS VKELVEN++DA AT++ + +KE G + ++ DNG
Sbjct: 2 PEIMLLNQETIDKIAAGEVVERPSSVVKELVENAIDAKATAVTVEIKEGGISFIRITDNG 61
Query: 70 CGI 72
CGI
Sbjct: 62 CGI 64
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 71/136 (52%), Gaps = 8/136 (5%)
Query: 112 LKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQY-- 169
L T G+ + KD I ++G +I + + V +++ K+ GF+ KP G +R Y
Sbjct: 197 LHTSGNGNEKDLIYHIYGRDITSAVLKVE-HETELFKLRGFIGKPMISRG----NRNYEN 251
Query: 170 FFVNDRPVDLPKVSKLVNELYKG-ANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDE 228
+F+N R + ++K + E YKG QYP ++ F + + DVNV P K ++ FS
Sbjct: 252 YFINGRYIKSALIAKSIEEAYKGFMMQHQYPFCVLYFEMDSELLDVNVHPTKMELRFSQN 311
Query: 229 CSILHALREGLQEIYS 244
I H+L E +++ S
Sbjct: 312 EEIYHSLFEIIRDTIS 327
>gi|421858020|ref|ZP_16290309.1| DNA mismatch repair enzyme [Paenibacillus popilliae ATCC 14706]
gi|410832470|dbj|GAC40746.1| DNA mismatch repair enzyme [Paenibacillus popilliae ATCC 14706]
Length = 710
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 110/252 (43%), Gaps = 28/252 (11%)
Query: 567 HTSGSVKMRRCFAAATLELSQPENEERKARALAAATTELERLFRKE--DFGRMKVIGQFN 624
+ GS R +A+ ++P + R+A ALAA + E F +++IGQ +
Sbjct: 470 YADGSGSPRSGVSASAQAPTEPPSGFRQAGALAAWQVGAGKPTEAELPPFPAVELIGQLH 529
Query: 625 LGFIIGKLDQDLFIVDQHAADEK----YNFERLSQSTVLNQQPLLRPLKLDLTPEEEVVA 680
++I + L++VDQHAA E+ Y +ER +Q+ LL PL L+ T E V
Sbjct: 530 GTYLIASNTEGLYLVDQHAAHERINYEYYYERFGHPEEASQE-LLLPLTLEFTTAEAVRI 588
Query: 681 SMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSI 740
+ ++ + G LE G F +++ P F + DL+ + D +
Sbjct: 589 RDRLHLLEQAGIWLE----PFGGQTFLVRSYPH----WFPNGEEADLVREMTDWVLREKV 640
Query: 741 ISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHG 800
K+ A ++ S C++SI L E + +L LA P+ CPHG
Sbjct: 641 PDIAKLREASAIMCS----------CKASIKANQRLAEAEAETLLARLAACRQPYTCPHG 690
Query: 801 RPTMRHLVDLTT 812
RP +V TT
Sbjct: 691 RPI---VVKFTT 699
Score = 63.2 bits (152), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 67/118 (56%), Gaps = 7/118 (5%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
I ++ + ++I AG+V++ SS VKELVENS+DAG+T I++ ++E G + +V DNG
Sbjct: 3 VIHILDDHIANQIAAGEVVERPSSVVKELVENSIDAGSTRIDVTVEEGGLQLIRVKDNGS 62
Query: 71 GISPNNFKVRAVFLCQAYALIAKGVRFVCTNTTGKNVKSV-----VLKTQGSSSLKDN 123
GI+ ++ V F A + IA G + G +++ V + + +SS DN
Sbjct: 63 GIAEDD--VETAFQRHATSKIASGKDLFAIRSLGFRGEALPSIAAVARVELTSSADDN 118
Score = 43.1 bits (100), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 67/135 (49%), Gaps = 6/135 (4%)
Query: 110 VVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPG-QGSGRNLGDRQ 168
++L+T G+ L+ I V+G+ + PV + D K++G++ KP S RN
Sbjct: 195 LLLQTIGNGDLQQVIAAVYGVQTAKSMVPVEAEQLD-YKLKGYIGKPELTRSNRNA---M 250
Query: 169 YFFVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSD 227
+FVN R V +++ V + Y ++P+ +++ + DVNV P K +V FS
Sbjct: 251 SWFVNGRYVRSFALNQAVLKAYHTLLPINRFPMIVLHVQMHPTLVDVNVHPAKLEVRFSK 310
Query: 228 ECSILHALREGLQEI 242
E + + L++I
Sbjct: 311 EPDLCEFISSTLRDI 325
>gi|418620509|ref|ZP_13183313.1| DNA mismatch repair protein [Staphylococcus hominis VCU122]
gi|374822639|gb|EHR86659.1| DNA mismatch repair protein [Staphylococcus hominis VCU122]
Length = 674
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 91/191 (47%), Gaps = 21/191 (10%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADE--KYNFERLSQSTVLNQ-QPLLRPLKLDLT 673
M+V+GQ + +II + + +F++DQHAA E KY + R V N+ Q LL PL +
Sbjct: 486 MEVVGQVHGTYIIAQNENGMFMIDQHAAQERIKYEYFREKIGEVSNEVQDLLIPLTFHFS 545
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
+E+++ + + + K G LE G + + + P E +KD+I + +
Sbjct: 546 KDEQLIIDQYREELDKVGVHLEH----FGGYDYIVNSYPVWFPKVEAEEIIKDMIELVLN 601
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNS 793
++ I KM ++ S C+ SI L +NEM +++ L +
Sbjct: 602 HKK----IDVKKMREDAAIMMS----------CKKSIKANHYLKKNEMADLIDQLREAED 647
Query: 794 PWNCPHGRPTM 804
P+ CPHGRP +
Sbjct: 648 PFTCPHGRPII 658
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 46/68 (67%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ + + ++I AG+V++ SS VKEL+EN++DA AT I I +++ G +VVDNG G
Sbjct: 4 IKELQTSLANKIAAGEVVERPSSVVKELLENAIDAKATEINIEVEQSGISSIRVVDNGTG 63
Query: 72 ISPNNFKV 79
I ++ ++
Sbjct: 64 IEQDDLQL 71
Score = 43.1 bits (100), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 65/136 (47%), Gaps = 8/136 (5%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYF 170
+LKT GS + + ++G+ + L ++ SD +EGF++KP ++ Y
Sbjct: 195 MLKTNGSGRTNEVMAEIYGIKVAKDLVHISGDTSD-YHLEGFVAKPEHSRS----NKHYI 249
Query: 171 --FVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSD 227
F+N R + ++K + E Y + +YPI +N + DVNV P K +V S
Sbjct: 250 SIFINGRYIKNFTLNKAITEGYHTLLTIGRYPICYINIEMDPILVDVNVHPTKLEVRLSK 309
Query: 228 ECSILHALREGLQEIY 243
E + + + E ++ +
Sbjct: 310 EEQLYNLIIEKIRHAF 325
>gi|322436381|ref|YP_004218593.1| DNA mismatch repair protein MutL [Granulicella tundricola MP5ACTX9]
gi|321164108|gb|ADW69813.1| DNA mismatch repair protein MutL [Granulicella tundricola MP5ACTX9]
Length = 659
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 97/190 (51%), Gaps = 22/190 (11%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQ---STVLNQQPLLRPLKLDLT 673
+K +GQ FI+ D+ L+IVDQH A E+ FE++ + + + +Q LL PL +DL
Sbjct: 471 LKPLGQIRDSFILAVNDEGLWIVDQHVAHERILFEKILRERNTEQIQRQRLLMPLLIDLM 530
Query: 674 PEEEVVASMHMDIIRKNGFSLEE-DPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLA 732
P++ V + + + + GF E P LA +K+ P + + ++DL+S +
Sbjct: 531 PDQMVAFARIAEELERQGFEAEPFGPRTLA-----VKSAPVGLEGRELEQMIEDLLS-VE 584
Query: 733 DNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLN 792
D G+ + AD+ R R + AS AC +++ I L R+++ +L L
Sbjct: 585 DRIGQT--------ENADT----RARRIAASMACHAAVKINMPLERSKIDWLLAELGKTE 632
Query: 793 SPWNCPHGRP 802
P +CPHGRP
Sbjct: 633 YPTSCPHGRP 642
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 46/65 (70%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR ++ V ++I AG+V++ +S VKEL+ENSLDAGAT I I ++ G + ++VDNG G
Sbjct: 4 IRILSDQVANQIAAGEVVERPASVVKELLENSLDAGATRIRIEVEAGGRKLIRIVDNGHG 63
Query: 72 ISPNN 76
+ ++
Sbjct: 64 MGKDD 68
>gi|228474975|ref|ZP_04059703.1| DNA mismatch repair protein MutL [Staphylococcus hominis SK119]
gi|228270960|gb|EEK12348.1| DNA mismatch repair protein MutL [Staphylococcus hominis SK119]
Length = 674
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 91/191 (47%), Gaps = 21/191 (10%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADE--KYNFERLSQSTVLNQ-QPLLRPLKLDLT 673
M+V+GQ + +II + + +F++DQHAA E KY + R V N+ Q LL PL +
Sbjct: 486 MEVVGQVHGTYIIAQNENGMFMIDQHAAQERIKYEYFREKIGEVSNEVQDLLIPLTFHFS 545
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
+E+++ + + + K G LE G + + + P E +KD+I + +
Sbjct: 546 KDEQLIIDQYREELDKVGVHLEH----FGGYDYIVNSYPVWFPKVEAEEIIKDMIELVLN 601
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNS 793
++ I KM ++ S C+ SI L +NEM +++ L +
Sbjct: 602 HKK----IDVKKMREDAAIMMS----------CKKSIKANHYLKKNEMADLIDQLREAED 647
Query: 794 PWNCPHGRPTM 804
P+ CPHGRP +
Sbjct: 648 PFTCPHGRPII 658
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 46/68 (67%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ + + ++I AG+V++ SS VKEL+EN++DA AT I I +++ G +VVDNG G
Sbjct: 4 IKELQTSLANKIAAGEVVERPSSVVKELLENAIDAKATEINIEVEQSGISSIRVVDNGTG 63
Query: 72 ISPNNFKV 79
I ++ ++
Sbjct: 64 IEQDDLQL 71
Score = 43.1 bits (100), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 65/136 (47%), Gaps = 8/136 (5%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYF 170
+LKT GS + + ++G+ + L ++ SD +EGF++KP ++ Y
Sbjct: 195 MLKTNGSGRTNEVMAEIYGIKVAKDLVHISGDTSD-YHLEGFVAKPEHSRS----NKHYI 249
Query: 171 --FVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSD 227
F+N R + ++K + E Y + +YPI +N + DVNV P K +V S
Sbjct: 250 SIFINGRYIKNFALNKAITEGYHTLLTIGRYPICYINIEMDPILVDVNVHPTKLEVRLSK 309
Query: 228 ECSILHALREGLQEIY 243
E + + + E ++ +
Sbjct: 310 EEQLYNLIIEKIRHAF 325
>gi|408789865|ref|ZP_11201506.1| DNA mismatch repair protein MutL [Lactobacillus florum 2F]
gi|408520887|gb|EKK20909.1| DNA mismatch repair protein MutL [Lactobacillus florum 2F]
Length = 629
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 98/213 (46%), Gaps = 25/213 (11%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQST--VLN-QQPLLRPLKL 670
F ++ + Q + +++ + D+ L+++DQHAA E+ N+ERL + V N +QPLL PL
Sbjct: 428 FPSLRYLAQVHGTYLVAEGDEGLYLIDQHAAQERINYERLRVAVGKVENSEQPLLVPLIF 487
Query: 671 DLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIST 730
D + E + ++ + G LE PF +F V I
Sbjct: 488 DYSAAEALTIQQNLATLASIGLQLE----------------PFGSN-SFVVHQHPTWIKA 530
Query: 731 LADNQGECSIISSYKMDTADSVCPSRVR-AMLASRACRSSIMIGDALGRNEMQKILEHLA 789
+ +I + S+ R + A++AS C+ +I L + + +L+ LA
Sbjct: 531 GQEESTIRELIDWVLVHRQVSIADFREQTAIMAS--CKQAIKANHHLDQKQAVALLQRLA 588
Query: 790 DLNSPWNCPHGRPTMRHL--VDLTTIRKNIDEN 820
+P+NCPHGRP + H DL T+ K I +
Sbjct: 589 QCENPYNCPHGRPVLVHFSNTDLETMFKRIQDT 621
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 41/58 (70%)
Query: 22 RICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFKV 79
+I AG+VI+ +S VKELVENS+DA +T I++ +++ + +V+DNG GI P ++
Sbjct: 15 QISAGEVIERPASVVKELVENSIDAQSTKIDVVIEDTNHQVIKVIDNGTGIVPEQVEL 72
>gi|293366739|ref|ZP_06613415.1| DNA mismatch repair protein HexB [Staphylococcus epidermidis
M23864:W2(grey)]
gi|417909814|ref|ZP_12553547.1| DNA mismatch repair protein, C-terminal domain protein
[Staphylococcus epidermidis VCU037]
gi|418605351|ref|ZP_13168676.1| DNA mismatch repair protein [Staphylococcus epidermidis VCU041]
gi|418616768|ref|ZP_13179692.1| DNA mismatch repair protein [Staphylococcus epidermidis VCU120]
gi|418624388|ref|ZP_13187063.1| DNA mismatch repair protein [Staphylococcus epidermidis VCU125]
gi|418628487|ref|ZP_13191032.1| DNA mismatch repair protein [Staphylococcus epidermidis VCU127]
gi|419768103|ref|ZP_14294240.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus
IS-250]
gi|419770905|ref|ZP_14296967.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus
IS-K]
gi|420197186|ref|ZP_14702910.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM020]
gi|420214223|ref|ZP_14719502.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIH05005]
gi|420216055|ref|ZP_14721277.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIH05001]
gi|420227087|ref|ZP_14731860.1| DNA mismatch repair protein [Staphylococcus epidermidis NIH05003]
gi|420231768|ref|ZP_14736413.1| DNA mismatch repair protein [Staphylococcus epidermidis NIH051668]
gi|291319040|gb|EFE59410.1| DNA mismatch repair protein HexB [Staphylococcus epidermidis
M23864:W2(grey)]
gi|341652423|gb|EGS76211.1| DNA mismatch repair protein, C-terminal domain protein
[Staphylococcus epidermidis VCU037]
gi|374402448|gb|EHQ73473.1| DNA mismatch repair protein [Staphylococcus epidermidis VCU041]
gi|374820846|gb|EHR84922.1| DNA mismatch repair protein [Staphylococcus epidermidis VCU120]
gi|374827617|gb|EHR91478.1| DNA mismatch repair protein [Staphylococcus epidermidis VCU125]
gi|374837333|gb|EHS00899.1| DNA mismatch repair protein [Staphylococcus epidermidis VCU127]
gi|383361024|gb|EID38407.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus
IS-250]
gi|383362454|gb|EID39806.1| DNA mismatch repair protein [Staphylococcus aureus subsp. aureus
IS-K]
gi|394265993|gb|EJE10639.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM020]
gi|394283588|gb|EJE27753.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIH05005]
gi|394292505|gb|EJE36247.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIH05001]
gi|394297588|gb|EJE41185.1| DNA mismatch repair protein [Staphylococcus epidermidis NIH05003]
gi|394302310|gb|EJE45758.1| DNA mismatch repair protein [Staphylococcus epidermidis NIH051668]
Length = 645
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 95/192 (49%), Gaps = 23/192 (11%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADE--KYNFERLSQSTVLNQ-QPLLRPLKLDLT 673
M+++GQ + +II + + +F++DQHAA E KY + R V N+ Q LL PL +
Sbjct: 457 MEIVGQVHGTYIIAQNENGMFMIDQHAAQERIKYEYFREKIGEVTNEVQNLLIPLTFHFS 516
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
+E+++ + D + K G LE G + + + P + F E+ +++I + +
Sbjct: 517 KDEQMIIDQYKDELDKVGVHLEH----FGGHDYIVNSYP----VWFPKEEAEEIIKDMIE 568
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLA-SRACRSSIMIGDALGRNEMQKILEHLADLN 792
++ +K SV ++R A +C+ SI L NEM +++ L +
Sbjct: 569 ------LVLKHK-----SVDVKKIREDAAIMMSCKKSIKANHYLKNNEMADLIDQLREAE 617
Query: 793 SPWNCPHGRPTM 804
P+ CPHGRP +
Sbjct: 618 DPFTCPHGRPII 629
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 43/62 (69%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ + + ++I AG+V++ SS VKEL+EN++DA AT I I +++ G +VVDNG G
Sbjct: 4 IKELETSLANKIAAGEVVERPSSVVKELLENAIDAQATEINIEVEQSGVSSIRVVDNGTG 63
Query: 72 IS 73
I+
Sbjct: 64 IA 65
Score = 39.7 bits (91), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 13/145 (8%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYF 170
+L T GS + + ++GM + L ++ SD +EGF++KP ++ Y
Sbjct: 195 LLSTNGSGRTNEVMAEIYGMKVAKDLVHISGDTSD-YHLEGFVAKPEHSRS----NKHYI 249
Query: 171 --FVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSD 227
F+N R + ++K + E Y + ++PI +N + DVNV P K +V S
Sbjct: 250 SIFINGRYIKNFVLNKAILEGYHTLLTIGRFPICYINIQMDPILVDVNVHPTKLEVRLSK 309
Query: 228 ECS----ILHALREGLQE-IYSPNN 247
E I+ +RE ++ I P N
Sbjct: 310 EDQLYDLIVTKIREAFKDKILIPQN 334
>gi|314936542|ref|ZP_07843889.1| DNA mismatch repair protein HexB [Staphylococcus hominis subsp.
hominis C80]
gi|313655161|gb|EFS18906.1| DNA mismatch repair protein HexB [Staphylococcus hominis subsp.
hominis C80]
Length = 674
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 91/191 (47%), Gaps = 21/191 (10%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADE--KYNFERLSQSTVLNQ-QPLLRPLKLDLT 673
M+V+GQ + +II + + +F++DQHAA E KY + R V N+ Q LL PL +
Sbjct: 486 MEVVGQVHGTYIIAQNENGMFMIDQHAAQERIKYEYFREKIGEVSNEVQDLLIPLTFHFS 545
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
+E+++ + + + K G LE G + + + P E +KD+I + +
Sbjct: 546 KDEQLIIDQYREELDKVGVHLEH----FGGYDYIVNSYPVWFPKVEAEEIIKDMIELVLN 601
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNS 793
++ I KM ++ S C+ SI L +NEM +++ L +
Sbjct: 602 HKK----IDVKKMREDAAIMMS----------CKKSIKANHYLKKNEMADLIDQLREAED 647
Query: 794 PWNCPHGRPTM 804
P+ CPHGRP +
Sbjct: 648 PFTCPHGRPII 658
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 46/68 (67%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ + + ++I AG+V++ SS VKEL+EN++DA AT I I +++ G +VVDNG G
Sbjct: 4 IKELQTSLANKIAAGEVVERSSSVVKELLENAIDAKATEINIEVEQSGISSIRVVDNGTG 63
Query: 72 ISPNNFKV 79
I ++ ++
Sbjct: 64 IEQDDLQL 71
Score = 43.1 bits (100), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 65/136 (47%), Gaps = 8/136 (5%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYF 170
+LKT GS + + ++G+ + L ++ SD +EGF++KP ++ Y
Sbjct: 195 MLKTNGSGRTNEVMAEIYGIKVAKDLVHISGDTSD-YHLEGFVAKPEHSRS----NKHYI 249
Query: 171 --FVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSD 227
F+N R + ++K + E Y + +YPI +N + DVNV P K +V S
Sbjct: 250 SIFINGRYIKNFALNKAITEGYHTLLTIGRYPICYINIEMDPILVDVNVHPTKLEVRLSK 309
Query: 228 ECSILHALREGLQEIY 243
E + + + E ++ +
Sbjct: 310 EEQLYNLIIEKIRHAF 325
>gi|56912184|ref|NP_958476.2| PMS1 protein homolog 1 [Danio rerio]
gi|22204384|emb|CAD43440.1| SI:dZ72B14.2 (novel protein similar to human postmeiotic
segregation increased 1-like protein (PMSL1)) [Danio
rerio]
Length = 896
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 94/203 (46%), Gaps = 21/203 (10%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGM-NIYNCLEP 138
R L AYA+I +R ++ K+VV + S + ++ V G ++ N L
Sbjct: 171 RVQNLLMAYAVIKPELRVTLSHN-----KAVVWQKSRVSDHRTALMAVLGAASVANMLPV 225
Query: 139 VAICKSDSCKVEGFLSKPGQG---SGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANS 195
+ ++GF KPG + + D+ + FVN RPV ++ KL+ + Y A S
Sbjct: 226 QHHQEQPEITIDGFFPKPGSDLNSTSSSTTDKSFIFVNSRPVHHKEILKLIKQYYTSAQS 285
Query: 196 ------RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNAS 249
R+YP +MN +P DVN+TPDK +V ++ +L ++ L +Y +N
Sbjct: 286 NSESVSRRYPTFMMNITIPASTVDVNLTPDKTEVMLQNKDEVLLSVETMLISLYGYSNGE 345
Query: 250 YSVNK------VEQLIEPEKSGP 266
++ V L EP+++ P
Sbjct: 346 ENLKTAGNPPDVTSLDEPKRTSP 368
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 43/63 (68%)
Query: 20 VHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFKV 79
V +C+ QVI + + VKEL+ENSLDAG++S+E+ L+ YG + +V DNG GI + V
Sbjct: 9 VRLLCSSQVITSVLNVVKELIENSLDAGSSSLEVKLENYGLDRIEVRDNGSGIKATDVSV 68
Query: 80 RAV 82
AV
Sbjct: 69 MAV 71
>gi|27467893|ref|NP_764530.1| DNA mismatch repair protein [Staphylococcus epidermidis ATCC 12228]
gi|57866809|ref|YP_188446.1| DNA mismatch repair protein [Staphylococcus epidermidis RP62A]
gi|251810728|ref|ZP_04825201.1| DNA mismatch repair protein MutL [Staphylococcus epidermidis
BCM-HMP0060]
gi|282876271|ref|ZP_06285138.1| DNA mismatch repair protein, C-terminal domain protein
[Staphylococcus epidermidis SK135]
gi|417646314|ref|ZP_12296175.1| DNA mismatch repair protein, C-terminal domain protein
[Staphylococcus epidermidis VCU144]
gi|417913484|ref|ZP_12557151.1| DNA mismatch repair protein, C-terminal domain protein
[Staphylococcus epidermidis VCU109]
gi|418607738|ref|ZP_13170961.1| DNA mismatch repair protein [Staphylococcus epidermidis VCU057]
gi|418609790|ref|ZP_13172924.1| DNA mismatch repair protein [Staphylococcus epidermidis VCU065]
gi|418612150|ref|ZP_13175196.1| DNA mismatch repair protein [Staphylococcus epidermidis VCU117]
gi|418626827|ref|ZP_13189423.1| DNA mismatch repair protein [Staphylococcus epidermidis VCU126]
gi|420172704|ref|ZP_14679202.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM067]
gi|420193966|ref|ZP_14699795.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM021]
gi|420234456|ref|ZP_14739019.1| DNA mismatch repair protein [Staphylococcus epidermidis NIH051475]
gi|421607201|ref|ZP_16048447.1| DNA mismatch repair protein [Staphylococcus epidermidis AU12-03]
gi|38372356|sp|Q8CPE9.1|MUTL_STAES RecName: Full=DNA mismatch repair protein MutL
gi|71151980|sp|Q5HPP4.1|MUTL_STAEQ RecName: Full=DNA mismatch repair protein MutL
gi|27315438|gb|AAO04572.1|AE016747_69 DNA mismatch repair protein [Staphylococcus epidermidis ATCC 12228]
gi|57637467|gb|AAW54255.1| DNA mismatch repair protein HexB [Staphylococcus epidermidis RP62A]
gi|251805888|gb|EES58545.1| DNA mismatch repair protein MutL [Staphylococcus epidermidis
BCM-HMP0060]
gi|281295296|gb|EFA87823.1| DNA mismatch repair protein, C-terminal domain protein
[Staphylococcus epidermidis SK135]
gi|329728043|gb|EGG64487.1| DNA mismatch repair protein, C-terminal domain protein
[Staphylococcus epidermidis VCU144]
gi|341655766|gb|EGS79490.1| DNA mismatch repair protein, C-terminal domain protein
[Staphylococcus epidermidis VCU109]
gi|374403855|gb|EHQ74850.1| DNA mismatch repair protein [Staphylococcus epidermidis VCU057]
gi|374406126|gb|EHQ77029.1| DNA mismatch repair protein [Staphylococcus epidermidis VCU065]
gi|374820032|gb|EHR84146.1| DNA mismatch repair protein [Staphylococcus epidermidis VCU117]
gi|374831371|gb|EHR95113.1| DNA mismatch repair protein [Staphylococcus epidermidis VCU126]
gi|394241381|gb|EJD86795.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM067]
gi|394266664|gb|EJE11289.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM021]
gi|394304259|gb|EJE47666.1| DNA mismatch repair protein [Staphylococcus epidermidis NIH051475]
gi|406656993|gb|EKC83386.1| DNA mismatch repair protein [Staphylococcus epidermidis AU12-03]
Length = 645
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 95/192 (49%), Gaps = 23/192 (11%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADE--KYNFERLSQSTVLNQ-QPLLRPLKLDLT 673
M+++GQ + +II + + +F++DQHAA E KY + R V N+ Q LL PL +
Sbjct: 457 MEIVGQVHGTYIIAQNENGMFMIDQHAAQERIKYEYFREKIGEVTNEVQNLLIPLTFHFS 516
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
+E+++ + D + K G LE G + + + P + F E+ +++I + +
Sbjct: 517 KDEQMIIDQYKDELDKVGVHLEH----FGGHDYIVNSYP----VWFPKEEAEEIIKDMIE 568
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLA-SRACRSSIMIGDALGRNEMQKILEHLADLN 792
++ +K SV ++R A +C+ SI L NEM +++ L +
Sbjct: 569 ------LVLKHK-----SVDVKKIREDAAIMMSCKKSIKANHYLKNNEMADLIDQLREAE 617
Query: 793 SPWNCPHGRPTM 804
P+ CPHGRP +
Sbjct: 618 DPFTCPHGRPII 629
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 43/62 (69%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ + + ++I AG+V++ SS VKEL+EN++DA AT I I +++ G +VVDNG G
Sbjct: 4 IKELETSLANKIAAGEVVERPSSVVKELLENAIDAQATEINIEVEQSGVSSIRVVDNGTG 63
Query: 72 IS 73
I+
Sbjct: 64 IA 65
Score = 40.0 bits (92), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 75/164 (45%), Gaps = 16/164 (9%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYF 170
+L T GS + + ++GM + L ++ SD +EGF++KP ++ Y
Sbjct: 195 LLSTNGSGRTNEVMAEIYGMKVAKDLVHISGDTSD-YHLEGFVAKPEHSRS----NKHYI 249
Query: 171 --FVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSD 227
F+N R + ++K + E Y + ++PI +N + DVNV P K +V S
Sbjct: 250 SIFINGRYIKNFVLNKAILEGYHTLLTIGRFPICYINIQMDPILVDVNVHPTKLEVRLSK 309
Query: 228 ECS----ILHALREGLQE-IYSPN---NASYSVNKVEQLIEPEK 263
E I+ +RE ++ I P N + NKV + E +K
Sbjct: 310 EDQLYDLIVTKIREAFKDKILIPQNDLNHASKKNKVLETFEQQK 353
>gi|417658897|ref|ZP_12308510.1| DNA mismatch repair protein, C-terminal domain protein
[Staphylococcus epidermidis VCU045]
gi|420221912|ref|ZP_14726837.1| DNA mismatch repair protein [Staphylococcus epidermidis NIH08001]
gi|420224774|ref|ZP_14729612.1| DNA mismatch repair protein [Staphylococcus epidermidis NIH06004]
gi|420229410|ref|ZP_14734116.1| DNA mismatch repair protein [Staphylococcus epidermidis NIH04003]
gi|329736536|gb|EGG72802.1| DNA mismatch repair protein, C-terminal domain protein
[Staphylococcus epidermidis VCU045]
gi|394289943|gb|EJE33813.1| DNA mismatch repair protein [Staphylococcus epidermidis NIH08001]
gi|394294177|gb|EJE37863.1| DNA mismatch repair protein [Staphylococcus epidermidis NIH06004]
gi|394299176|gb|EJE42727.1| DNA mismatch repair protein [Staphylococcus epidermidis NIH04003]
Length = 645
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 95/192 (49%), Gaps = 23/192 (11%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADE--KYNFERLSQSTVLNQ-QPLLRPLKLDLT 673
M+++GQ + +II + + +F++DQHAA E KY + R V N+ Q LL PL +
Sbjct: 457 MEIVGQVHGTYIIAQNENGMFMIDQHAAQERIKYEYFREKIGEVTNEVQNLLIPLTFHFS 516
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
+E+++ + D + K G LE G + + + P + F E+ +++I + +
Sbjct: 517 KDEQMIIDQYKDELDKVGVHLEH----FGGHDYIVNSYP----VWFPKEEAEEIIKDMIE 568
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLA-SRACRSSIMIGDALGRNEMQKILEHLADLN 792
++ +K SV ++R A +C+ SI L NEM +++ L +
Sbjct: 569 ------LVLKHK-----SVDVKKIREDAAIMMSCKKSIKANHYLKNNEMADLIDQLREAE 617
Query: 793 SPWNCPHGRPTM 804
P+ CPHGRP +
Sbjct: 618 DPFTCPHGRPII 629
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 43/62 (69%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ + + ++I AG+V++ SS VKEL+EN++DA AT I I +++ G +VVDNG G
Sbjct: 4 IKELETSLANKIAAGEVVERPSSVVKELLENAIDAQATEINIEVEQSGVSSIRVVDNGTG 63
Query: 72 IS 73
I+
Sbjct: 64 IA 65
Score = 39.7 bits (91), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 13/145 (8%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYF 170
+L T GS + + ++GM + L ++ SD +EGF++KP ++ Y
Sbjct: 195 LLSTNGSGRTNEVMAEIYGMKVAKDLVHISGDTSD-YHLEGFVAKPEHSRS----NKHYI 249
Query: 171 --FVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSD 227
F+N R + ++K + E Y + ++PI +N + DVNV P K +V S
Sbjct: 250 SIFINSRYIKNFVLNKAILEGYHTLLTIGRFPICYINIQMDPILVDVNVHPTKLEVRLSK 309
Query: 228 ECS----ILHALREGLQE-IYSPNN 247
E I+ +RE ++ I P N
Sbjct: 310 EDQLYDLIVTKIREAFKDKILIPQN 334
>gi|160880512|ref|YP_001559480.1| DNA mismatch repair protein MutL [Clostridium phytofermentans ISDg]
gi|160429178|gb|ABX42741.1| DNA mismatch repair protein MutL [Clostridium phytofermentans ISDg]
Length = 695
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 93/201 (46%), Gaps = 23/201 (11%)
Query: 608 LFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFE----RLSQSTVLNQQP 663
L +E + ++IGQ + +L+ L+I+DQHAA EK +E RL + ++QQ
Sbjct: 498 LLSEEGIRQARIIGQAFKTYWFIELENQLYIIDQHAAHEKVLYESTMKRLKEKETMSQQ- 556
Query: 664 LLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVED 723
L P+ L L EE H + + GF +E G + + AVP FG+
Sbjct: 557 LCPPVILTLNLREEEAIKTHREFLSMLGFEIE----PFGGKEYAVSAVPAD---MFGLAG 609
Query: 724 VKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQK 783
+ LI + D E S P + +AS +C++++ L E +
Sbjct: 610 ERLLIEFIDDLVEEIS-----------RGTPDVILEKIASLSCKAAVKGNYNLSVEEANE 658
Query: 784 ILEHLADLNSPWNCPHGRPTM 804
+L+ L L +P++CPHGRP +
Sbjct: 659 LLKQLLTLENPFHCPHGRPII 679
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 46/65 (70%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I +++ +++I AG+V++ +S VKEL+EN++DAGAT++ +K+ G + ++ DNG G
Sbjct: 4 IALLDQSTINQIAAGEVVERPASVVKELIENAIDAGATAVTAEIKDGGISFIRITDNGAG 63
Query: 72 ISPNN 76
I ++
Sbjct: 64 IEKDD 68
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 17/136 (12%)
Query: 96 RFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICK-SDSCKVEGFLS 154
+F+ N T VL T G+S LKD I V+G I E V + ++ + G++
Sbjct: 188 KFINNNKT-------VLHTFGNSQLKDIIYHVYGRTI--AAEVVTVENGNEHISISGYIG 238
Query: 155 KPGQGSGRNLGDRQY--FFVNDRPVDLPKVSKLVNELYKGAN-SRQYPIAIMNFIVPTRA 211
KP G +R Y +F+N R + ++K + E Y+ + +YP ++F +
Sbjct: 239 KPIISRG----NRNYENYFINGRYIKSNIINKAIEEAYRPYSMQHKYPFTAIHFSINPEF 294
Query: 212 CDVNVTPDKRKVFFSD 227
DVNV P K +V F +
Sbjct: 295 IDVNVHPTKMEVRFHN 310
>gi|420199079|ref|ZP_14704763.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM031]
gi|394272765|gb|EJE17215.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM031]
Length = 645
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 95/192 (49%), Gaps = 23/192 (11%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADE--KYNFERLSQSTVLNQ-QPLLRPLKLDLT 673
M+++GQ + +II + + +F++DQHAA E KY + R V N+ Q LL PL +
Sbjct: 457 MEIVGQVHGTYIIAQNENGMFMIDQHAAQERIKYEYFREKIGEVTNEVQNLLIPLTFHFS 516
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
+E+++ + D + K G LE G + + + P + F E+ +++I + +
Sbjct: 517 KDEQMIIDQYKDELDKVGVHLEH----FGGHDYIVNSYP----VWFPKEEAEEIIKDMIE 568
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLA-SRACRSSIMIGDALGRNEMQKILEHLADLN 792
++ +K SV ++R A +C+ SI L NEM +++ L +
Sbjct: 569 ------LVLKHK-----SVDVKKIREDAAIMMSCKKSIKANHYLKNNEMADLIDQLREAE 617
Query: 793 SPWNCPHGRPTM 804
P+ CPHGRP +
Sbjct: 618 DPFTCPHGRPII 629
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 43/62 (69%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ + + ++I AG+V++ SS VKEL+EN++DA AT I I +++ G +VVDNG G
Sbjct: 4 IKELETSLANKIAAGEVVERPSSVVKELLENAIDAQATEINIEVEQSGVSSIRVVDNGTG 63
Query: 72 IS 73
I+
Sbjct: 64 IA 65
Score = 39.7 bits (91), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 13/145 (8%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYF 170
+L T GS + + ++GM + L ++ SD +EGF++KP ++ Y
Sbjct: 195 LLSTNGSGRTNEVMAEIYGMKVAKDLVHISGDTSD-YHLEGFVAKPEHSRS----NKHYI 249
Query: 171 --FVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSD 227
F+N R + ++K + E Y + ++PI +N + DVNV P K +V S
Sbjct: 250 SIFINGRYIKNFVLNKAILEGYHTLLTIGRFPICYINIQMDPILVDVNVHPTKLEVRLSK 309
Query: 228 ECS----ILHALREGLQE-IYSPNN 247
E I+ +RE ++ I P N
Sbjct: 310 EDQLYDLIVTKIREAFKDKILIPQN 334
>gi|417910738|ref|ZP_12554454.1| DNA mismatch repair protein, C-terminal domain protein
[Staphylococcus epidermidis VCU105]
gi|418622025|ref|ZP_13184781.1| DNA mismatch repair protein [Staphylococcus epidermidis VCU123]
gi|420187498|ref|ZP_14693518.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM039]
gi|420212649|ref|ZP_14717997.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM001]
gi|341654926|gb|EGS78662.1| DNA mismatch repair protein, C-terminal domain protein
[Staphylococcus epidermidis VCU105]
gi|374827400|gb|EHR91262.1| DNA mismatch repair protein [Staphylococcus epidermidis VCU123]
gi|394255940|gb|EJE00876.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM039]
gi|394279610|gb|EJE23916.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM001]
Length = 645
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 95/192 (49%), Gaps = 23/192 (11%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADE--KYNFERLSQSTVLNQ-QPLLRPLKLDLT 673
M+++GQ + +II + + +F++DQHAA E KY + R V N+ Q LL PL +
Sbjct: 457 MEIVGQVHGTYIIAQNENGMFMIDQHAAQERIKYEYFREKIGEVTNEVQNLLIPLTFHFS 516
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
+E+++ + D + K G LE G + + + P + F E+ +++I + +
Sbjct: 517 KDEQMIIDQYKDELDKVGVHLEH----FGGHDYIVNSYP----VWFPKEEAEEIIKDMIE 568
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLA-SRACRSSIMIGDALGRNEMQKILEHLADLN 792
++ +K SV ++R A +C+ SI L NEM +++ L +
Sbjct: 569 ------LVLKHK-----SVDVKKIREDAAIMMSCKKSIKANHYLKNNEMADLIDQLREAE 617
Query: 793 SPWNCPHGRPTM 804
P+ CPHGRP +
Sbjct: 618 DPFTCPHGRPII 629
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 43/62 (69%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ + + ++I AG+V++ SS VKEL+EN++DA AT I I +++ G +VVDNG G
Sbjct: 4 IKELETSLANKIAAGEVVERPSSVVKELLENAIDAQATEINIEVEQSGVSSIRVVDNGTG 63
Query: 72 IS 73
I+
Sbjct: 64 IA 65
Score = 39.7 bits (91), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 13/145 (8%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYF 170
+L T GS + + ++GM + L ++ SD +EGF++KP ++ Y
Sbjct: 195 LLSTNGSGRTNEVMAEIYGMKVAKDLVHISGDTSD-YHLEGFVAKPEHSRS----NKHYI 249
Query: 171 --FVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSD 227
F+N R + ++K + E Y + ++PI +N + DVNV P K +V S
Sbjct: 250 SIFINGRYIKNFVLNKAILEGYHTLLTIGRFPICYINIQMDPILVDVNVHPTKLEVRLSK 309
Query: 228 ECS----ILHALREGLQE-IYSPNN 247
E I+ +RE ++ I P N
Sbjct: 310 EDQLYDLIVTKIREAFKDKILIPQN 334
>gi|83589962|ref|YP_429971.1| DNA mismatch repair protein MutL [Moorella thermoacetica ATCC
39073]
gi|83572876|gb|ABC19428.1| DNA mismatch repair protein MutL [Moorella thermoacetica ATCC
39073]
Length = 620
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 90/194 (46%), Gaps = 28/194 (14%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQP---LLRPLKLDLT 673
++ +GQ +I+ + L+I+DQHAA E+ +E L + P L PL L L
Sbjct: 438 LRALGQVFNTYILAGGEDGLYIIDQHAAHERCRYEALVKEGTPGSHPAQMLEPPLPLHLA 497
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
P+ +V + +R+ GF +EE + F L++VP E ++D +
Sbjct: 498 PDMQVKLIDQIITLRELGFIIEEFGTGV----FLLRSVPLGIPPGKEREVLEDFL----- 548
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNS 793
A+S P+ R +L AC +I G +L EMQK+L+ L ++
Sbjct: 549 ---------------AESTLPAPER-LLKLIACHGAIKAGQSLAGAEMQKLLDDLRGVDH 592
Query: 794 PWNCPHGRPTMRHL 807
P+ CPHGRP + L
Sbjct: 593 PYTCPHGRPAVVRL 606
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 37/55 (67%)
Query: 22 RICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNN 76
+I AG+V++ +S VKELVENSLDA A I + ++ G + +V D+G GI P +
Sbjct: 19 QIAAGEVVERPASVVKELVENSLDAAARHITVEIEGGGLQLIRVRDDGRGIEPED 73
>gi|420182966|ref|ZP_14689099.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM049]
gi|394249429|gb|EJD94642.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM049]
Length = 645
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 95/192 (49%), Gaps = 23/192 (11%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADE--KYNFERLSQSTVLNQ-QPLLRPLKLDLT 673
M+++GQ + +II + + +F++DQHAA E KY + R V N+ Q LL PL +
Sbjct: 457 MEIVGQVHGTYIIAQNENGMFMIDQHAAQERIKYEYFREKIGEVTNEVQNLLIPLTFHFS 516
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
+E+++ + D + K G LE G + + + P + F E+ +++I + +
Sbjct: 517 KDEQMIIDQYKDELDKVGVHLEH----FGGHDYIVNSYP----VWFPKEEAEEIIKDMIE 568
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLA-SRACRSSIMIGDALGRNEMQKILEHLADLN 792
++ +K SV ++R A +C+ SI L NEM +++ L +
Sbjct: 569 ------LVLKHK-----SVDVKKIREDAAIMMSCKKSIKANHYLKNNEMADLIDQLREAE 617
Query: 793 SPWNCPHGRPTM 804
P+ CPHGRP +
Sbjct: 618 DPFTCPHGRPII 629
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 43/62 (69%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ + + ++I AG+V++ SS VKEL+EN++DA AT I I +++ G +VVDNG G
Sbjct: 4 IKELETSLANKIAAGEVVERPSSVVKELLENAIDAQATEINIEVEQSGVSSIRVVDNGTG 63
Query: 72 IS 73
I+
Sbjct: 64 IA 65
Score = 39.7 bits (91), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 13/145 (8%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYF 170
+L T GS + + ++GM + L ++ SD +EGF++KP ++ Y
Sbjct: 195 LLSTNGSGRTNEVMAEIYGMKVAKDLVHISGDTSD-YHLEGFVAKPEHSRS----NKHYI 249
Query: 171 --FVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSD 227
F+N R + ++K + E Y + ++PI +N + DVNV P K +V S
Sbjct: 250 SIFINGRYIKNFVLNKAILEGYHTLLTIGRFPICYINIQMDPILVDVNVHPTKLEVRLSK 309
Query: 228 ECS----ILHALREGLQE-IYSPNN 247
E I+ +RE ++ I P N
Sbjct: 310 EDQLYDLIVTKIREAFKDKILIPQN 334
>gi|420169832|ref|ZP_14676410.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM070]
gi|420206383|ref|ZP_14711893.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM008]
gi|420209425|ref|ZP_14714862.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM003]
gi|394243132|gb|EJD88506.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM070]
gi|394278222|gb|EJE22539.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM008]
gi|394278872|gb|EJE23184.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM003]
Length = 645
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 95/192 (49%), Gaps = 23/192 (11%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADE--KYNFERLSQSTVLNQ-QPLLRPLKLDLT 673
M+++GQ + +II + + +F++DQHAA E KY + R V N+ Q LL PL +
Sbjct: 457 MEIVGQVHGTYIIAQNENGMFMIDQHAAQERIKYEYFREKIGEVTNEVQNLLIPLTFHFS 516
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
+E+++ + D + K G LE G + + + P + F E+ +++I + +
Sbjct: 517 KDEQMIIDQYKDELDKVGVHLEH----FGGHDYIVNSYP----VWFPKEEAEEIIKDMIE 568
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLA-SRACRSSIMIGDALGRNEMQKILEHLADLN 792
++ +K SV ++R A +C+ SI L NEM +++ L +
Sbjct: 569 ------LVLKHK-----SVDVKKIREDAAIMMSCKKSIKANHYLKNNEMADLIDQLREAE 617
Query: 793 SPWNCPHGRPTM 804
P+ CPHGRP +
Sbjct: 618 DPFTCPHGRPII 629
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 43/62 (69%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ + + ++I AG+V++ SS VKEL+EN++DA AT I I +++ G +VVDNG G
Sbjct: 4 IKELETSLANKIAAGEVVERPSSVVKELLENAIDAQATEINIEVEQSGVSSIRVVDNGTG 63
Query: 72 IS 73
I+
Sbjct: 64 IA 65
Score = 39.7 bits (91), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 13/145 (8%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYF 170
+L T GS + + ++GM + L ++ SD +EGF++KP ++ Y
Sbjct: 195 LLSTNGSGRTNEVMAEIYGMKVAKDLVHISGDTSD-YHLEGFVAKPEHSRS----NKHYI 249
Query: 171 --FVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSD 227
F+N R + ++K + E Y + ++PI +N + DVNV P K +V S
Sbjct: 250 SIFINGRYIKNFVLNKAILEGYHTLLTIGRFPICYINIQMDPILVDVNVHPTKLEVRLSK 309
Query: 228 ECS----ILHALREGLQE-IYSPNN 247
E I+ +RE ++ I P N
Sbjct: 310 EDQLYDLIVTKIREAFKDKILIPQN 334
>gi|417656649|ref|ZP_12306332.1| DNA mismatch repair protein, C-terminal domain protein
[Staphylococcus epidermidis VCU028]
gi|418664718|ref|ZP_13226184.1| DNA mismatch repair protein [Staphylococcus epidermidis VCU081]
gi|329736310|gb|EGG72582.1| DNA mismatch repair protein, C-terminal domain protein
[Staphylococcus epidermidis VCU028]
gi|374410164|gb|EHQ80925.1| DNA mismatch repair protein [Staphylococcus epidermidis VCU081]
Length = 645
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 95/192 (49%), Gaps = 23/192 (11%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADE--KYNFERLSQSTVLNQ-QPLLRPLKLDLT 673
M+++GQ + +II + + +F++DQHAA E KY + R V N+ Q LL PL +
Sbjct: 457 MEIVGQVHGTYIIAQNENGMFMIDQHAAQERIKYEYFREKIGEVTNEVQNLLIPLTFHFS 516
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
+E+++ + D + K G LE G + + + P + F E+ +++I + +
Sbjct: 517 KDEQMIIDQYKDELDKVGVHLEH----FGGHDYIVNSYP----VWFPKEEAEEIIKDMIE 568
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLA-SRACRSSIMIGDALGRNEMQKILEHLADLN 792
++ +K SV ++R A +C+ SI L NEM +++ L +
Sbjct: 569 ------LVLKHK-----SVDVKKIREDAAIMMSCKKSIKANHYLKNNEMADLIDQLREAE 617
Query: 793 SPWNCPHGRPTM 804
P+ CPHGRP +
Sbjct: 618 DPFTCPHGRPII 629
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 43/62 (69%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ + + ++I AG+V++ SS VKEL+EN++DA AT I I +++ G +VVDNG G
Sbjct: 4 IKELETSLANKIAAGEVVERPSSVVKELLENAIDAQATEINIEVEQSGVSSIRVVDNGTG 63
Query: 72 IS 73
I+
Sbjct: 64 IA 65
Score = 39.3 bits (90), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 13/145 (8%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYF 170
+L T GS + + ++GM + L ++ SD +EGF++KP ++ Y
Sbjct: 195 LLSTNGSGRTNEVMAEIYGMKVAKDLVHISGDTSD-YHLEGFVAKPEHSRS----NKHYI 249
Query: 171 --FVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSD 227
F+N R + ++K + E Y + ++PI +N + DVNV P K +V S
Sbjct: 250 SIFINGRYIKNFVLNKAILEGYHTLLTIGRFPICYINIQMDPILVDVNVHPTKLEVRLSK 309
Query: 228 ECS----ILHALREGLQE-IYSPNN 247
E I+ +RE ++ I P N
Sbjct: 310 EDQLYDLIVTKIREAFKDKILIPQN 334
>gi|448386288|ref|ZP_21564414.1| DNA mismatch repair protein MutL [Haloterrigena thermotolerans DSM
11522]
gi|445655239|gb|ELZ08085.1| DNA mismatch repair protein MutL [Haloterrigena thermotolerans DSM
11522]
Length = 734
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 93/191 (48%), Gaps = 18/191 (9%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTV--LNQQPLLRPLKLDLTP 674
++V+GQ + +++ + D L ++DQHAADE+ N+ERL + Q L P++L+LT
Sbjct: 538 LRVLGQLHDTYLVCETDDGLVLIDQHAADERVNYERLQAAFADDATAQALADPVELELTA 597
Query: 675 EEEVVASMHMDIIRKNGFSLEE-DPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
E + + + + + GF + D +A + VP + T + ++D++++
Sbjct: 598 AEAEAFAQYSEALSRLGFYADRTDDRTVA-----VTTVPAVLEKTLEPDRLRDVLASFVA 652
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNS 793
E +T D++ L AC SI +L + +LE L D +
Sbjct: 653 GDREAG------AETVDALADE----FLGDLACYPSITGNTSLTEGSVVDLLEALDDCEN 702
Query: 794 PWNCPHGRPTM 804
P++CPHGRP +
Sbjct: 703 PYSCPHGRPVI 713
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 51/79 (64%)
Query: 1 MDVETPTNSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGE 60
M + P + I +++ V RI AG+V++ +SAVKELVENSLDA A S+++ ++ G
Sbjct: 1 MTTDPPQDDTEIHQLDEDTVARIAAGEVVERPASAVKELVENSLDADADSVDVTVEAGGT 60
Query: 61 EWFQVVDNGCGISPNNFKV 79
E +VVD+G G+S + +
Sbjct: 61 ELIRVVDDGRGMSEVDLRA 79
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 55/133 (41%), Gaps = 20/133 (15%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSC-----KVEGFLSKPGQGSGRNLG 165
V T G L+ I+ V+G + + + PV D V G +S P N
Sbjct: 206 VFSTTGQGDLQAAILAVYGREVASSMIPVEADGDDLPPGPLESVSGLVSHPET----NRS 261
Query: 166 DRQYF--FVNDRPVDLPKVSKLVNELYKGANSRQ-----YPIAIMNFIVPTRACDVNVTP 218
R Y +VN R V + V E GA Q YP + VP A DVNV P
Sbjct: 262 SRDYLATYVNGRAV----TADAVREGLMGAYGTQLGGDRYPFVTLFLEVPGGAVDVNVHP 317
Query: 219 DKRKVFFSDECSI 231
KR+V F D+ ++
Sbjct: 318 RKREVRFDDDDAV 330
>gi|395755440|ref|XP_003779946.1| PREDICTED: LOW QUALITY PROTEIN: postmeiotic segregation increased
4-like protein-like [Pongo abelii]
Length = 260
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/68 (55%), Positives = 52/68 (76%), Gaps = 1/68 (1%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSI-EIALKEYGEEWFQVVDNGC 70
I+PI++ VHRIC+G V+ LS+AVKELVENSLDAGAT+I + +K+YG + +V DNG
Sbjct: 30 IKPIDRKSVHRICSGPVVLSLSTAVKELVENSLDAGATNIGKSKVKDYGVDLIEVSDNGF 89
Query: 71 GISPNNFK 78
G+ NF+
Sbjct: 90 GVEEENFE 97
>gi|148658624|ref|YP_001278829.1| DNA mismatch repair protein MutL [Roseiflexus sp. RS-1]
gi|148570734|gb|ABQ92879.1| DNA mismatch repair protein MutL [Roseiflexus sp. RS-1]
Length = 605
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 92/195 (47%), Gaps = 30/195 (15%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQ---STVLNQQPLLRPLKLDLT 673
+++IGQ +I+ + ++++DQHAA E+ +ERL + + Q LL P +DL
Sbjct: 418 LRIIGQIAQSYIVAESADGMYLIDQHAAHERITYERLMAQRGAGAVESQELLMPQVVDLP 477
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVP---FSKKITFGVEDVKDLIST 730
P + + + + GF +E G R++A+P + +T + ++ D +S
Sbjct: 478 PTAHDLLLAAANRLAEWGFVVEP-----FGRSLRVRAIPAVLYPGDLTTALLEIADHLS- 531
Query: 731 LADNQGECSIISSYKMDTADSVCPSRVR-AMLASRACRSSIMIGDALGRNEMQKILEHLA 789
+G + P R AML + +C +S+ G L +EM+ ++ L
Sbjct: 532 ---GRGGAT--------------PHDWREAMLITLSCHTSVRAGQTLSFDEMRGLVMQLE 574
Query: 790 DLNSPWNCPHGRPTM 804
SP CPHGRPTM
Sbjct: 575 QCESPRTCPHGRPTM 589
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 99/231 (42%), Gaps = 40/231 (17%)
Query: 34 SAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPN----------NFKVRAVF 83
+AV +++ + AGA + + L+ G E ++ GC SP N VR F
Sbjct: 103 AAVAQVICITRAAGA-DVGVELRIAGGEVQAIMPRGC--SPGTTISVRNLFYNTPVRREF 159
Query: 84 L-------------CQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGM 130
L YAL VRF G+ L T G+ L+ I V+G+
Sbjct: 160 LRSDATESAAITAVVTQYALAYPEVRF-SLAIDGR----ATLHTSGNGDLRAAAIEVYGL 214
Query: 131 NIYNCLEPVAICKSDSC---KVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPK--VSKL 185
++ L PV + +V G +S PG R+ + FVN R + P+ ++ +
Sbjct: 215 DVARQLLPVEASTGEGVEYVQVSGLVSPPGLT--RSSRAAIHLFVNRRAIQ-PRGQIAMV 271
Query: 186 VNELYKGANSR-QYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHAL 235
+ E Y + ++P+AI+N V A DVNV P K +V F D ++ L
Sbjct: 272 LEEAYHTLLMKGRHPVAILNISVHPAAVDVNVHPTKSEVKFRDTTRVMSTL 322
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 43/68 (63%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR ++ V +I AG+VI+ +S V+ELVEN+LDAGA I + + G +V D+GCG
Sbjct: 3 IRVLDATVAAQIAAGEVIERPASVVRELVENALDAGARRIAVEARGGGLREIRVQDDGCG 62
Query: 72 ISPNNFKV 79
I + ++
Sbjct: 63 IPADEVEL 70
>gi|418325424|ref|ZP_12936630.1| DNA mismatch repair protein [Staphylococcus epidermidis VCU071]
gi|365228026|gb|EHM69211.1| DNA mismatch repair protein [Staphylococcus epidermidis VCU071]
Length = 645
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 95/192 (49%), Gaps = 23/192 (11%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADE--KYNFERLSQSTVLNQ-QPLLRPLKLDLT 673
M+++GQ + +II + + +F++DQHAA E KY + R V N+ Q LL PL +
Sbjct: 457 MEIVGQVHGTYIIAQNENGMFMIDQHAAQERIKYEYFREKIGEVTNEVQNLLIPLTFHFS 516
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
+E+++ + D + K G LE G + + + P + F E+ +++I + +
Sbjct: 517 KDEQMIIDQYKDELDKVGVHLEH----FGGHDYIVNSYP----VWFPKEEAEEIIKDMIE 568
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLA-SRACRSSIMIGDALGRNEMQKILEHLADLN 792
++ +K SV ++R A +C+ SI L NEM +++ L +
Sbjct: 569 ------LVLKHK-----SVDVKKIREDAAIMMSCKKSIKANHYLKNNEMADLIDQLREAE 617
Query: 793 SPWNCPHGRPTM 804
P+ CPHGRP +
Sbjct: 618 DPFTCPHGRPII 629
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 43/62 (69%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ + + ++I AG+V++ SS VKEL+EN++DA AT I I +++ G +VVDNG G
Sbjct: 4 IKELETSLANKIAAGEVVERPSSVVKELLENAIDAQATEINIEVEQSGVSSIRVVDNGTG 63
Query: 72 IS 73
I+
Sbjct: 64 IA 65
Score = 41.2 bits (95), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 75/164 (45%), Gaps = 16/164 (9%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYF 170
+L T GS + + ++GM + L ++ SD +EGF++KP ++ Y
Sbjct: 195 LLSTNGSGRTNEVMAEIYGMKVAKDLVHISGDTSD-YHLEGFVAKPEHSRS----NKHYI 249
Query: 171 --FVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSD 227
F+N R + ++K + E Y + ++PI +N + DVNV P K +V S
Sbjct: 250 SIFINGRYIKNFVLNKAILEGYHTLLTIGRFPICYINIQMDPILVDVNVHPTKLEVRLSK 309
Query: 228 ECS----ILHALREGLQE-IYSPNNASYSV---NKVEQLIEPEK 263
E I+ +RE ++ I P N V NKV + E +K
Sbjct: 310 EDQLYDLIVTKIREAFKDKILIPQNDLNHVPKKNKVLETFEQQK 353
>gi|420165169|ref|ZP_14671873.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM088]
gi|394236336|gb|EJD81870.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM088]
Length = 645
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 95/192 (49%), Gaps = 23/192 (11%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADE--KYNFERLSQSTVLNQ-QPLLRPLKLDLT 673
M+++GQ + +II + + +F++DQHAA E KY + R V N+ Q LL PL +
Sbjct: 457 MEIVGQVHGTYIIAQNENGMFMIDQHAAQERIKYEYFREKIGEVTNEVQNLLIPLTFHFS 516
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
+E+++ + D + K G LE G + + + P + F E+ +++I + +
Sbjct: 517 KDEQMIIDQYKDELDKVGVHLEH----FGGHDYIVNSYP----VWFPKEEAEEIIKDMIE 568
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLA-SRACRSSIMIGDALGRNEMQKILEHLADLN 792
++ +K SV ++R A +C+ SI L NEM +++ L +
Sbjct: 569 ------LVLKHK-----SVDVKKIREDAAIMMSCKKSIKANHYLKNNEMADLIDQLREAE 617
Query: 793 SPWNCPHGRPTM 804
P+ CPHGRP +
Sbjct: 618 DPFTCPHGRPII 629
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 53/93 (56%), Gaps = 2/93 (2%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ + + ++I AG+V++ SS VKEL+EN++DA AT I I +++ G +VVDNG G
Sbjct: 4 IKELETSLANKIAAGEVVERPSSVVKELLENAIDAQATEINIEVEQSGVSSIRVVDNGTG 63
Query: 72 ISPNNFKVRAVFLCQAYALIAKGVRFVCTNTTG 104
I+ + + VF A + I + T G
Sbjct: 64 IAQEDLGL--VFHRHATSKIVADDDLLHIRTLG 94
Score = 40.0 bits (92), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 75/164 (45%), Gaps = 16/164 (9%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYF 170
+L T GS + + ++GM + L ++ SD +EGF++KP ++ Y
Sbjct: 195 LLSTNGSGRTNEVMAEIYGMKVAKDLVHISGDTSD-YHLEGFVAKPEHSRS----NKHYI 249
Query: 171 --FVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSD 227
F+N R + ++K + E Y + ++PI +N + DVNV P K +V S
Sbjct: 250 SIFINGRYIKNFVLNKAILEGYHTLLTIGRFPICYINIQMDPILVDVNVHPTKLEVRLSK 309
Query: 228 ECS----ILHALREGLQE-IYSPN---NASYSVNKVEQLIEPEK 263
E I+ +RE ++ I P N + NKV + E +K
Sbjct: 310 EDQLYDLIVTKIREAFKDKILIPQNDLNHASKKNKVLETFEQQK 353
>gi|148543761|ref|YP_001271131.1| DNA mismatch repair protein [Lactobacillus reuteri DSM 20016]
gi|184153167|ref|YP_001841508.1| DNA mismatch repair protein [Lactobacillus reuteri JCM 1112]
gi|325682133|ref|ZP_08161651.1| DNA mismatch repair protein HexB [Lactobacillus reuteri MM4-1A]
gi|167017343|sp|A5VIX0.1|MUTL_LACRD RecName: Full=DNA mismatch repair protein MutL
gi|229486324|sp|B2G6E6.1|MUTL_LACRJ RecName: Full=DNA mismatch repair protein MutL
gi|148530795|gb|ABQ82794.1| DNA mismatch repair protein MutL [Lactobacillus reuteri DSM 20016]
gi|183224511|dbj|BAG25028.1| DNA mismatch repair protein HexB [Lactobacillus reuteri JCM 1112]
gi|324978777|gb|EGC15726.1| DNA mismatch repair protein HexB [Lactobacillus reuteri MM4-1A]
Length = 668
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 93/199 (46%), Gaps = 21/199 (10%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQ---STVLNQQPLLRPLKL 670
F ++ IGQ F++ + L+IVDQHAA E+ N+E Q +QQ L PL L
Sbjct: 462 FPDLQYIGQLQGTFLLAQAGDGLYIVDQHAAQERINYEYYRQKIGEVSADQQNFLVPLVL 521
Query: 671 DLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIST 730
+ + + + + H+D + G LE + F L++ P K + +++I
Sbjct: 522 NYSTVDAMTINQHLDTLAAVGLELE----SFGQNSFILRSHPTWFKEGQEEDTAEEMIDW 577
Query: 731 LADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLAD 790
L N G+ ++ ++M TA M++ C+ +I L E + +L+ L
Sbjct: 578 LIKN-GKLTV-KEFRMKTA---------IMMS---CKRAIKANHHLDEREAKALLKRLPQ 623
Query: 791 LNSPWNCPHGRPTMRHLVD 809
+P+NCPHGRP H D
Sbjct: 624 CENPFNCPHGRPVTVHFND 642
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 43/62 (69%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I ++ + ++I AG+VI+ +S VKELVENSLDA + ++I ++ G + +V+D+G G
Sbjct: 4 IHELDNILANQIAAGEVIERPASIVKELVENSLDAHSHRVDIIVENSGLDSVRVIDDGDG 63
Query: 72 IS 73
I+
Sbjct: 64 IA 65
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 79/175 (45%), Gaps = 19/175 (10%)
Query: 73 SPNNFKVRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNI 132
SP R + AL V F T+ G+ + ++ G+++L+ + ++G+
Sbjct: 163 SPQTELTRITDIINRLALANPAVAFSFTHN-GREL----FRSAGNNNLQQVVAAIYGVQA 217
Query: 133 YNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFV--NDRPVDLPKVSKLVNELY 190
+ ++ D KV GF+S P RQY + N R + + +L +
Sbjct: 218 GRKMLEIS-GADDDFKVSGFVSLPELTRA----SRQYITITINHRYI---RNFELTKAII 269
Query: 191 KGANSR----QYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQE 241
+G S+ +YPIA++N + DVNV P KR+V S E ++ + E +++
Sbjct: 270 QGYESKLMVGRYPIAVINIDLDPVLVDVNVHPAKREVRLSKEQQLIKLIAETIRQ 324
>gi|227363259|ref|ZP_03847391.1| DNA mismatch repair protein [Lactobacillus reuteri MM2-3]
gi|227071715|gb|EEI10006.1| DNA mismatch repair protein [Lactobacillus reuteri MM2-3]
gi|290558719|gb|ADD37853.1| DNA mismatch repair protein HexB [Lactobacillus reuteri]
Length = 668
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 93/199 (46%), Gaps = 21/199 (10%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQ---STVLNQQPLLRPLKL 670
F ++ IGQ F++ + L+IVDQHAA E+ N+E Q +QQ L PL L
Sbjct: 462 FPDLQYIGQLQGTFLLAQAGDGLYIVDQHAAQERINYEYYRQKIGEVSADQQNFLVPLVL 521
Query: 671 DLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIST 730
+ + + + + H+D + G LE + F L++ P K + +++I
Sbjct: 522 NYSTVDAMTINQHLDTLAAVGLELE----SFGQNSFILRSHPTWFKEGQEEDTAEEMIDW 577
Query: 731 LADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLAD 790
L N G+ ++ ++M TA M++ C+ +I L E + +L+ L
Sbjct: 578 LIKN-GKLTV-KEFRMKTA---------IMMS---CKRAIKANHHLDEREAKALLKRLPQ 623
Query: 791 LNSPWNCPHGRPTMRHLVD 809
+P+NCPHGRP H D
Sbjct: 624 CENPFNCPHGRPVTVHFND 642
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 43/62 (69%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I ++ + ++I AG+VI+ +S VKELVENSLDA + ++I ++ G + +V+D+G G
Sbjct: 4 IHELDNILANQIAAGEVIERPASIVKELVENSLDAHSHRVDIIVENSGLDSVRVIDDGDG 63
Query: 72 IS 73
I+
Sbjct: 64 IA 65
Score = 43.9 bits (102), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 79/175 (45%), Gaps = 19/175 (10%)
Query: 73 SPNNFKVRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNI 132
SP R + AL V F T+ G+ + ++ G+++L+ + ++G+
Sbjct: 163 SPQTELTRITDIINRLALANPAVAFSFTHN-GREL----FRSAGNNNLQQVVAAIYGVQA 217
Query: 133 YNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFV--NDRPVDLPKVSKLVNELY 190
+ ++ D KV GF+S P RQY + N R + + +L +
Sbjct: 218 GRKMLEIS-GADDDFKVSGFVSLPELTRA----SRQYITITINHRYI---RNFELTKAII 269
Query: 191 KGANSR----QYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQE 241
+G S+ +YPIA++N + DVNV P KR+V S E ++ + E +++
Sbjct: 270 QGYESKLMVGRYPIAVINIDLDPVLVDVNVHPAKREVRLSKEQQLIKLIAETIRQ 324
>gi|257051097|ref|YP_003128930.1| DNA mismatch repair protein MutL [Halorhabdus utahensis DSM 12940]
gi|256689860|gb|ACV10197.1| DNA mismatch repair protein MutL [Halorhabdus utahensis DSM 12940]
Length = 709
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 99/205 (48%), Gaps = 25/205 (12%)
Query: 605 LERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTV--LNQQ 662
LE+ F + M+V+GQF +++ + D L ++DQHAADE+ N+ERL + Q
Sbjct: 500 LEQTF--DSLPSMRVLGQFQETYVVAETDTGLVLIDQHAADERINYERLRDAFAGETTTQ 557
Query: 663 PLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEED-PHALAGLRFRLKAVPFSKKITFGV 721
L +P+++DLT E SL ED ALA L F + V T V
Sbjct: 558 ALAQPVEIDLTARES---------------SLFEDFQAALARLGFSAERV---DDRTVAV 599
Query: 722 EDVKDLISTLADNQGECSIISSYKMDTAD--SVCPSRVRAMLASRACRSSIMIGDALGRN 779
V L++ AD + ++SS+ +D + + A+LA AC SI +L
Sbjct: 600 TTVPSLVAETADPELLRDVLSSFVDSDSDPGATVEAAAEAVLADLACYPSITGNTSLTEG 659
Query: 780 EMQKILEHLADLNSPWNCPHGRPTM 804
+ +LE L +P+ CPHGRP +
Sbjct: 660 SIVDLLERLEACENPYACPHGRPVV 684
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 74/171 (43%), Gaps = 16/171 (9%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPV---AICKSDSCKVEGFLSKPGQGSGRNLGDR 167
T G SL++ ++ V+G + + V + ++G +S P N DR
Sbjct: 197 TFATTGGDSLRETVMAVYGREVAESMIDVDARELPAGPLDAIDGLVSHPET----NRADR 252
Query: 168 QYF--FVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACDVNVTPDKRKVF 224
+Y FVN R V + E Y S +YP A+++ +P DVNV P K +V
Sbjct: 253 EYVATFVNGRYVRSSAARNAIVEAYGNQLSPDRYPFAVLDLSLPAGTVDVNVHPRKMEVR 312
Query: 225 FSDECSILHALREGLQEIYSPN-----NASYSVNKVEQL-IEPEKSGPSSG 269
F+DE + +R ++E N A + EQ I+P + P SG
Sbjct: 313 FADEAGLREQVRAAVEETLLENGLIRSGAPRGQSAPEQTEIDPTATTPDSG 363
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 46/68 (67%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR +++ + RI AG+V++ +S VKEL+ENSLDA A+ + +A++ G E +V D+G G
Sbjct: 4 IRELDQTTIERIAAGEVVERPASVVKELLENSLDADASRVRVAVEAGGTESIRVSDDGVG 63
Query: 72 ISPNNFKV 79
++ + +
Sbjct: 64 MTEGDARA 71
>gi|260812020|ref|XP_002600719.1| hypothetical protein BRAFLDRAFT_83461 [Branchiostoma floridae]
gi|229286008|gb|EEN56731.1| hypothetical protein BRAFLDRAFT_83461 [Branchiostoma floridae]
Length = 1072
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 76/169 (44%), Gaps = 13/169 (7%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICK 143
+ A +I VRF + K V + + + TV G L+ V
Sbjct: 185 IMMALGVIKPDVRFSLIHN-----KCTVWQKNKYPDHRTALRTVLGTGTMALLQGVEHRN 239
Query: 144 SD-SCKVEGFLSKPG---QGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANS---- 195
+ V+GFL KPG Q R DR + F N+RPV + V KLV + Y G+ S
Sbjct: 240 VEPQVDVQGFLPKPGADPQAVTRATTDRSFVFFNERPVQMKGVEKLVRQYYHGSTSDGAS 299
Query: 196 RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYS 244
++PI ++ VP D NV P+K KV + SIL + E LQ +YS
Sbjct: 300 SRHPIIFLSIKVPPAEIDPNVEPNKTKVLLHNNDSILSVIEEMLQTVYS 348
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 39/61 (63%), Gaps = 4/61 (6%)
Query: 28 VIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFKVRAVFLCQA 87
VI + S VKELVENSLDA ATS+++ L+ +G + V DNG GIS + A F+ Q
Sbjct: 27 VITSVFSVVKELVENSLDAQATSVDVKLESFGFDRIVVSDNGSGIS----RADAEFMAQR 82
Query: 88 Y 88
+
Sbjct: 83 H 83
>gi|420218837|ref|ZP_14723887.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIH04008]
gi|394291582|gb|EJE35380.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIH04008]
Length = 645
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 95/192 (49%), Gaps = 23/192 (11%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADE--KYNFERLSQSTVLNQ-QPLLRPLKLDLT 673
M+++GQ + +II + + +F++DQHAA E KY + R V N+ Q LL PL +
Sbjct: 457 MEIVGQVHGTYIIAQNENGMFMIDQHAAQERIKYEYFREKIGEVTNEMQNLLIPLTFHFS 516
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
+E+++ + D + K G LE G + + + P + F E+ +++I + +
Sbjct: 517 KDEQMIIDQYKDELDKVGVHLEH----FGGHDYIVNSYP----VWFPKEEAEEIIKDMIE 568
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLA-SRACRSSIMIGDALGRNEMQKILEHLADLN 792
++ +K SV ++R A +C+ SI L NEM +++ L +
Sbjct: 569 ------LVLKHK-----SVDVKKIREDAAIMMSCKKSIKANHYLKNNEMADLIDQLREAE 617
Query: 793 SPWNCPHGRPTM 804
P+ CPHGRP +
Sbjct: 618 DPFTCPHGRPII 629
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 43/62 (69%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ + + ++I AG+V++ SS VKEL+EN++DA AT I I +++ G +VVDNG G
Sbjct: 4 IKELETSLANKIAAGEVVERPSSVVKELLENAIDAQATEINIEVEQSGVSSIRVVDNGTG 63
Query: 72 IS 73
I+
Sbjct: 64 IA 65
Score = 41.2 bits (95), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 13/145 (8%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYF 170
+L T GS + + ++GM + L ++ SD +EGF++KP ++ Y
Sbjct: 195 LLSTNGSGRTNEVMAEIYGMKVAKDLVHISGDTSD-YHLEGFVAKPEHSRS----NKHYI 249
Query: 171 --FVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSD 227
F+N R + ++K + E Y + ++PI +N + DVNV P K +V S
Sbjct: 250 SIFINGRYIKNFVLNKAILEGYHTLLTIGRFPICYINIQMDPILVDVNVHPTKLEVRLSK 309
Query: 228 ECS----ILHALREGLQE-IYSPNN 247
E I+ +RE Q+ I P N
Sbjct: 310 EDQLYDLIVTKIREAFQDKILIPQN 334
>gi|88604448|ref|YP_504626.1| DNA mismatch repair protein MutL [Methanospirillum hungatei JF-1]
gi|88189910|gb|ABD42907.1| DNA mismatch repair protein MutL [Methanospirillum hungatei JF-1]
Length = 599
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 93/200 (46%), Gaps = 26/200 (13%)
Query: 610 RKEDFGRMKVIGQFNLGFIIGKLDQD--LFIVDQHAADEKYNFERLSQ--STVLNQQPLL 665
R E F + IGQ +I+ D+ LF++DQHAA E+ +++L Q S L Q L+
Sbjct: 406 RDERFPELFWIGQVGGTYIVAS-DKTGALFLIDQHAAHERVRYDQLKQQESLHLKTQELI 464
Query: 666 RPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVK 725
P+ L L+P E + + ++ GF +E PF + T+ V V
Sbjct: 465 APVVLTLSPSEAGLIPSVLPVLTDEGFIIE----------------PFGQD-TWCVRGVP 507
Query: 726 DLISTLADNQGECSIISSYKMDTADSVCPSRVR-AMLASRACRSSIMIGDALGRNEMQKI 784
++ D + II + ++ P R++ +L ACRS++ G L + I
Sbjct: 508 VVLGRYEDPETVREIIGTI---LSEDEGPVRLKEQVLRLVACRSAVKAGAVLTPEQGMDI 564
Query: 785 LEHLADLNSPWNCPHGRPTM 804
+ L+ PW CPHGRPT+
Sbjct: 565 INQLSQTADPWTCPHGRPTI 584
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 75/161 (46%), Gaps = 13/161 (8%)
Query: 9 SPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALK-EYGE-EWFQVV 66
+P I+ +++ VH I AG+V+ S VKELVEN++DA ++ I + L +G ++
Sbjct: 5 APVIQVLDESTVHLIAAGEVVDRPVSIVKELVENAIDAASSRITVELSTAHGVISRIRIT 64
Query: 67 DNGCGISPNNFKVRAVFLCQAYALIAKGVRFVCTNTTG---------KNVKSVVLKTQGS 117
D+G GI P++ +VR FL A + I G + T G V V + T+
Sbjct: 65 DDGVGI-PSD-QVRIAFLAHATSKIRTGEDLLSCRTLGFRGEALASIAAVSYVTMITKPK 122
Query: 118 SSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQ 158
S + + G + C E A + E F + P +
Sbjct: 123 ESDTAILFRITGGEVVECTETGAPNGTSITVEEVFFNTPAR 163
>gi|420185397|ref|ZP_14691489.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM040]
gi|394254383|gb|EJD99352.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM040]
Length = 645
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 95/192 (49%), Gaps = 23/192 (11%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADE--KYNFERLSQSTVLNQ-QPLLRPLKLDLT 673
M+++GQ + +II + + +F++DQHAA E KY + R V N+ Q LL PL +
Sbjct: 457 MEIVGQVHGTYIIAQNENGMFMIDQHAAQERIKYEYFREKIGEVTNEVQNLLIPLTFHFS 516
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
+E+++ + D + K G LE G + + + P + F E+ +++I + +
Sbjct: 517 KDEQMIIDQYKDELDKVGVHLEH----FGGHDYIVNSYP----VWFPKEEAEEIIKDMIE 568
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLA-SRACRSSIMIGDALGRNEMQKILEHLADLN 792
++ +K SV ++R A +C+ SI L NEM +++ L +
Sbjct: 569 ------LVLKHK-----SVDVKKIREDAAIMMSCKKSIKANHYLKNNEMADLIDQLREAE 617
Query: 793 SPWNCPHGRPTM 804
P+ CPHGRP +
Sbjct: 618 DPFTCPHGRPII 629
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 43/62 (69%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ + + ++I AG+V++ SS VKEL+EN++DA AT I I +++ G +VVDNG G
Sbjct: 4 IKELETSLANKIAAGEVVERPSSVVKELLENAIDAQATEINIEVEQSGVSSIRVVDNGTG 63
Query: 72 IS 73
I+
Sbjct: 64 IA 65
Score = 39.7 bits (91), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 13/145 (8%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYF 170
+L T GS + + ++GM + L ++ SD +EGF++KP ++ Y
Sbjct: 195 LLSTNGSGRTNEVMAEIYGMKVAKDLVHISGDTSD-YHLEGFVAKPEHSRS----NKHYI 249
Query: 171 --FVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSD 227
F+N R + ++K + E Y + ++PI +N + DVNV P K +V S
Sbjct: 250 SIFINGRYIKNFVLNKAILEGYHTLLTIGRFPICYINIQMDPILVDVNVHPTKLEVRLSK 309
Query: 228 ECS----ILHALREGLQE-IYSPNN 247
E I+ +RE ++ I P N
Sbjct: 310 EDQLYDLIVTKIREAFKDKILIPQN 334
>gi|149200821|ref|ZP_01877796.1| DNA mismatch repair protein [Roseovarius sp. TM1035]
gi|149145154|gb|EDM33180.1| DNA mismatch repair protein [Roseovarius sp. TM1035]
Length = 611
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 53/71 (74%)
Query: 7 TNSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVV 66
+ P IR +++G ++RI AG+V++ +SAVKELVEN+LDAGAT IE++ + G+ +V
Sbjct: 10 ADRPQIRQLDEGAINRIAAGEVVERPASAVKELVENALDAGATRIEVSYADGGKTLIRVS 69
Query: 67 DNGCGISPNNF 77
D+GCG++P+
Sbjct: 70 DDGCGMTPDEL 80
Score = 57.4 bits (137), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 79/191 (41%), Gaps = 24/191 (12%)
Query: 622 QFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTV---LNQQPLLRPLKLDLTPEEEV 678
Q + +II + + + IVDQHAA E+ +ERL + + Q LL P +DL+ +
Sbjct: 428 QVHENYIIAQTETGMVIVDQHAAHERLVYERLKRQMAESGIAAQALLIPEIVDLSEADCA 487
Query: 679 VASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGEC 738
+ H + + G +E PF + V + ++ T+ N G
Sbjct: 488 LLMDHAEELAGMGLGIE----------------PFGSG-SLAVRETPAILGTV--NAGAL 528
Query: 739 --SIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWN 796
I+ + A R+ A+L+ AC S+ G + +EM +L +
Sbjct: 529 LRDILDELQDQGASGTLKLRIDAILSRVACHGSVRSGRRMSADEMNALLREMERTPMSGQ 588
Query: 797 CPHGRPTMRHL 807
C HGRPT L
Sbjct: 589 CNHGRPTYVEL 599
>gi|156740125|ref|YP_001430254.1| DNA mismatch repair protein MutL [Roseiflexus castenholzii DSM
13941]
gi|156231453|gb|ABU56236.1| DNA mismatch repair protein MutL [Roseiflexus castenholzii DSM
13941]
Length = 605
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 92/192 (47%), Gaps = 24/192 (12%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQ---STVLNQQPLLRPLKLDLT 673
++++GQ +I+ + ++++DQHAA E+ +ERL + + +Q LL P +DL
Sbjct: 418 LRIVGQIAQSYIVAESPDGMYLIDQHAAHERITYERLMAQRGAGAIERQELLIPQVIDLP 477
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
P + V D + + GF++E G R++A+P D+ + +AD
Sbjct: 478 PTAQDVLLDAADRLAEWGFAVEP-----FGRSLRIRAIP----AVLYPGDLATALLEIAD 528
Query: 734 NQGECSIISSYKMDTADSVCPSRVR-AMLASRACRSSIMIGDALGRNEMQKILEHLADLN 792
+ + P R A+L + +C +S+ G L +EM+ ++ L +
Sbjct: 529 H-----------LSGRGGTTPHDWREALLITLSCHTSVRSGQTLSFDEMRGLVLQLERCS 577
Query: 793 SPWNCPHGRPTM 804
SP CPHGRPTM
Sbjct: 578 SPRTCPHGRPTM 589
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 43/68 (63%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR ++ V +I AG+VI+ +S V+ELVEN+LDAGA I + + G +V D+GCG
Sbjct: 3 IRVLDATVAAQIAAGEVIERPASVVRELVENALDAGARRIVVEARGGGLREIRVQDDGCG 62
Query: 72 ISPNNFKV 79
I + ++
Sbjct: 63 IPADEVEL 70
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 102/231 (44%), Gaps = 40/231 (17%)
Query: 34 SAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPN----------NFKVRAVF 83
+AV +++ + AGA + + L+ G E ++ GC SP N VR F
Sbjct: 103 AAVAQVICVTRAAGA-DVGVELRIAGGEVQAIMPRGC--SPGTTISVRNLFYNTPVRRDF 159
Query: 84 L-------------CQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGM 130
L YAL VRF G+ L+T G+ L+ I ++G+
Sbjct: 160 LRSDAAESAAITSVVTQYALAYPEVRFSLV-IDGR----ATLQTSGNGDLRAATIEIYGL 214
Query: 131 NIYNCLEPV--AICKS-DSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPK--VSKL 185
++ L + A+ + D +V G +S PG R+ + F+N R + P+ ++ +
Sbjct: 215 DVARQLLAIDAAVGEGVDLVQVRGLVSPPGLT--RSSRAAIHLFINRRAIQ-PRGQIAIV 271
Query: 186 VNELYKGANSR-QYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHAL 235
+ E Y + ++P+AI+N V A DVNV P K +V F + ++ L
Sbjct: 272 LEEAYHTLLMKGRHPMAILNITVHPAAVDVNVHPTKSEVKFRNTTQVMSVL 322
>gi|323486938|ref|ZP_08092253.1| DNA mismatch repair protein mutL [Clostridium symbiosum WAL-14163]
gi|323399710|gb|EGA92093.1| DNA mismatch repair protein mutL [Clostridium symbiosum WAL-14163]
Length = 684
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 95/202 (47%), Gaps = 21/202 (10%)
Query: 606 ERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTV---LNQQ 662
E+L K+ +IGQ + + + +L+I+DQHAA EK +E+ S Q
Sbjct: 485 EKLLTKQARNEHVLIGQLFDTYWLVQFHDNLYIIDQHAAHEKVLYEKTMASLKKREYTSQ 544
Query: 663 PLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVE 722
+ P+ L L+ EE++ +M+ GF +E G + ++AVP + F +
Sbjct: 545 MINPPIILTLSGNEELMLKKYMEHFTAVGFEIEH----FGGKEYAVRAVPAN---LFSIA 597
Query: 723 DVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQ 782
K+L+ + D D D P + +AS +C++++ A+ E
Sbjct: 598 K-KELLMEMIDGL----------TDGVDQGTPDIINEKIASMSCKAAVKGNHAMSAAEAD 646
Query: 783 KILEHLADLNSPWNCPHGRPTM 804
+++ L +L +P+ CPHGRPT+
Sbjct: 647 SLIDELLELENPYACPHGRPTI 668
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 8/119 (6%)
Query: 112 LKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQY-- 169
L T G+ +LKD I T+FG I L V ++ KVEGF+ KP G +R Y
Sbjct: 197 LHTSGNHNLKDIIYTIFGREIAANLIAVQ-SGAEPVKVEGFIGKPLIARG----NRNYEN 251
Query: 170 FFVNDRPVDLPKVSKLVNELYKG-ANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSD 227
+F+N R + ++K + + YK +YP ++ F + DVNV P K ++ F D
Sbjct: 252 YFINGRYIKSSLINKAIEDAYKPFMMQHKYPFTMLQFTIEPEFLDVNVHPAKMELRFRD 310
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 45/61 (73%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ +++ +++I AG+VI+ +S VKEL+EN++DA +T++ + +++ G +V DNGCG
Sbjct: 4 IQVLDQNTINQIAAGEVIERPASVVKELLENAVDAKSTAVTVEIRDGGLSMIRVTDNGCG 63
Query: 72 I 72
I
Sbjct: 64 I 64
>gi|414155129|ref|ZP_11411444.1| DNA mismatch repair protein mutL [Desulfotomaculum hydrothermale
Lam5 = DSM 18033]
gi|411453179|emb|CCO09348.1| DNA mismatch repair protein mutL [Desulfotomaculum hydrothermale
Lam5 = DSM 18033]
Length = 634
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 89/182 (48%), Gaps = 23/182 (12%)
Query: 627 FIIGKLDQDLFIVDQHAADEKYNFER----LSQSTVLNQQPLLRPLKLDLTPEEEVVASM 682
+++ + L+I+DQHAA E+ +E+ L Q V Q LL P+ L++ P E +
Sbjct: 458 YVLAYGEGGLYIIDQHAAHERVLYEKYLQQLQQEVV--AQMLLTPVPLEIPPHEAQLTVR 515
Query: 683 HMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIIS 742
H+ K GF +E G F L+ +P G E DL++ L ++
Sbjct: 516 HILDFNKLGFIVEH----FGGDTFLLRGIPPQAAQAPG-EIFMDLLALLQES-------P 563
Query: 743 SYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRP 802
S ++D S+ R + AS ACR ++ G LG E++ +L LA P+ CPHGRP
Sbjct: 564 SRQIDM--SLVIDR---LAASMACREAVKAGKNLGSLEIKALLSGLAGCRQPFTCPHGRP 618
Query: 803 TM 804
T+
Sbjct: 619 TL 620
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 42/59 (71%)
Query: 15 INKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGIS 73
+++ + ++I AG+V++ S VKELVENSLDAGA I + L + G +VVDNGCG+S
Sbjct: 8 LDETIANQIAAGEVVERPVSVVKELVENSLDAGAQRISVELTQGGITGIKVVDNGCGMS 66
Score = 52.8 bits (125), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 62/133 (46%), Gaps = 8/133 (6%)
Query: 110 VVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQY 169
++ + GS SLKD + G N + V C+ + V+G +SKP RQY
Sbjct: 196 ILFVSPGSGSLKDAAAVILGAANLNSMLEVN-CQGELLAVKGLISKPV----LTRASRQY 250
Query: 170 --FFVNDRPVDLPKVSKLVNELYKGA-NSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFS 226
FF+N R + S ++ + Y+ ++P+A+++ + DVNV P K +V +
Sbjct: 251 QNFFINGRYIRSSLFSNVLQQAYENQIPGGRFPVAVLHLTIDPAQVDVNVHPTKMEVRLA 310
Query: 227 DECSILHALREGL 239
E +L L L
Sbjct: 311 REKEVLDELTAAL 323
>gi|358067400|ref|ZP_09153879.1| hypothetical protein HMPREF9333_00760 [Johnsonella ignava ATCC
51276]
gi|356694316|gb|EHI55978.1| hypothetical protein HMPREF9333_00760 [Johnsonella ignava ATCC
51276]
Length = 661
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 94/196 (47%), Gaps = 33/196 (16%)
Query: 618 KVIGQ-FNLGFIIGKLDQDLFIVDQHAADEKYNFERL---SQSTVLNQQPLLRPLKLDLT 673
+++GQ FN +II + D ++ +DQHAA EK +E+ + + Q L PL + L+
Sbjct: 474 RIVGQLFNTYWII-EFDDKMYFIDQHAAHEKVMYEKFLKQYKDAQITSQLLSPPLIITLS 532
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVP-----FSKKITFGVEDVKDLI 728
E A + D + K GF E G + + AVP SK+ F K+++
Sbjct: 533 DIEAEAAYRYRDYLLKLGFEFEN----FGGKDYSVGAVPSLLPSVSKESVF-----KEVL 583
Query: 729 STLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHL 788
S L++ + P V +AS +C++++ L +E K+++ L
Sbjct: 584 SGLSEINTDME--------------PISVIEKIASMSCKAAVKGNQRLSYSEADKLIDEL 629
Query: 789 ADLNSPWNCPHGRPTM 804
L +P+NCPHGRPT+
Sbjct: 630 LSLKNPYNCPHGRPTI 645
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I ++K + +I AG+VI+ +S VKEL+EN+LD+GA ++ I +K+ G +V DNG G
Sbjct: 14 IAILDKNTIDKIAAGEVIERPASIVKELLENALDSGANAVSIEIKDGGTSLIRVTDNGSG 73
Query: 72 ISPNNFKVRAVFLCQA 87
I N +++ FL A
Sbjct: 74 IKKN--EIKTAFLRHA 87
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 81/162 (50%), Gaps = 11/162 (6%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICK 143
L Q AL + + F N ++L TQG+ SLKD + ++G N + + + +
Sbjct: 184 LVQKLALSNRNITFKYINNN-----KILLHTQGNGSLKDIVYQIYGKNAASSILEIN-YE 237
Query: 144 SDSCKVEGFLSKPGQG-SGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKG-ANSRQYPIA 201
+++ K+ G + KP + RN+ + F+N R + VS+ + + + +YP A
Sbjct: 238 NENIKISGCVGKPEFCLANRNM---EIIFINGRYIKDKYVSRGIEDGFADKMMQHKYPFA 294
Query: 202 IMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIY 243
I+ T + D+NV P K +V F D I +A+++ + E++
Sbjct: 295 ILYITTDTHSVDINVHPGKLEVRFEDPEYIYNAVKDAVSEVF 336
>gi|448738580|ref|ZP_21720603.1| DNA mismatch repair protein MutL [Halococcus thailandensis JCM
13552]
gi|445801464|gb|EMA51798.1| DNA mismatch repair protein MutL [Halococcus thailandensis JCM
13552]
Length = 690
Score = 77.8 bits (190), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 99/213 (46%), Gaps = 23/213 (10%)
Query: 601 ATTELERLFRKEDFGRM---KVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQST 657
AT + E + + DF R+ +V+GQ + + + + L +VDQHAA E+ N+ERL +
Sbjct: 470 ATLDGETVADEPDFERLPRLRVLGQLHDTYFVCESPDGLVLVDQHAAHERVNYERLRERV 529
Query: 658 V--LNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSK 715
N Q L P+ ++LT E + EE AL+ L FR A P
Sbjct: 530 AGETNIQELAEPVTIELTAAESAL--------------FEEFTEALSALGFR--ASPGDG 573
Query: 716 KITFGVEDVKDLISTLADNQGECSIISSYKMD-TADSVCPSRVRAMLASRACRSSIMIGD 774
K T V V +++ AD + +S++ + D A+LA AC SI
Sbjct: 574 K-TIEVAAVPAVLAGAADPELLRDALSAFVDERDPDETITQVSDALLADLACYPSITANT 632
Query: 775 ALGRNEMQKILEHLADLNSPWNCPHGRPTMRHL 807
+L + ++L L D +P+ CPHGRP + L
Sbjct: 633 SLSEGSVTELLRALDDCENPYACPHGRPVVIEL 665
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 43/61 (70%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I +++ + RI AG+V++ +S VKELVENSLDA A+ + IA++ G++ +V D+G G
Sbjct: 6 IHRLDQSTIERIAAGEVVERPASVVKELVENSLDADASRVRIAVERGGKDGVRVTDDGIG 65
Query: 72 I 72
+
Sbjct: 66 M 66
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 60/125 (48%), Gaps = 6/125 (4%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPV---AICKSDSCKVEGFLSKPGQGSGRNLGDR 167
V T G +L+ ++ V+G + + P+ + ++G +S P + R +
Sbjct: 199 VFSTTGQGNLESTVLAVYGREVAEAMIPLDGDLDAEGPLDAIDGVVSHPE--TTRASPQQ 256
Query: 168 QYFFVNDRPVDLPKVSKLVNELYKGA-NSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFS 226
FVN R V V + + Y G + +YP A++ VP+ DVNV P K+++ F+
Sbjct: 257 CTVFVNGRYVRASAVRDAIVDAYGGQLATDRYPFAVVFLSVPSNTVDVNVHPRKQEIRFA 316
Query: 227 DECSI 231
DE ++
Sbjct: 317 DEETV 321
>gi|253577911|ref|ZP_04855183.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251850229|gb|EES78187.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 663
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 97/202 (48%), Gaps = 21/202 (10%)
Query: 606 ERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQ---STVLNQQ 662
E+L E R ++IGQ + + + + FI+DQHAA EK +ER + + Q
Sbjct: 464 EKLLAPESRSRHQLIGQIFDTYWLVQFEDKFFIIDQHAAHEKVYYERFVKRFREQTVESQ 523
Query: 663 PLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVE 722
L PL + L +EE + + GF +E G + + AVP + +G+
Sbjct: 524 YLSPPLIVSLNLQEEALLKANRKYFEDFGFEIE----PFGGKEYCINAVPSN---LYGLT 576
Query: 723 DVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQ 782
+ ++L + DN ++S K + SR LA+ AC++++ + + E
Sbjct: 577 E-EELFLEMLDN------LASEKDKDPLGIFASR----LATMACKAAVKGNNQMSDREAN 625
Query: 783 KILEHLADLNSPWNCPHGRPTM 804
+++ L L +P++CPHGRPT+
Sbjct: 626 ALIDELLTLENPYHCPHGRPTI 647
Score = 57.4 bits (137), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 66/131 (50%), Gaps = 4/131 (3%)
Query: 108 KSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDR 167
K V L T G+ ++KD I ++G +I L V+ ++D K+EGF+ KP G +
Sbjct: 173 KQVKLHTSGNYNVKDVIYNIYGRDITKALLEVS-YENDFMKIEGFVGKPEISRGNRTFEN 231
Query: 168 QYFFVNDRPVDLPKVSKLVNELYKG-ANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFS 226
+++N R V ++K + + YKG ++P ++ + DVNV P K +V F+
Sbjct: 232 --YYINGRFVKNRIIAKGIEDAYKGFLMQHKFPFVSLHIQMEGNDLDVNVHPSKMEVRFA 289
Query: 227 DECSILHALRE 237
+ A+ E
Sbjct: 290 RGTEVYDAVYE 300
Score = 47.4 bits (111), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 40/61 (65%), Gaps = 2/61 (3%)
Query: 33 SSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFKVRAVFLCQAYALIA 92
SS VKELVEN++DAGAT++ + + + G++ ++ DNG G+ + +V FL A + I
Sbjct: 5 SSIVKELVENAIDAGATAVTVEITDGGKKMIRITDNGGGMERD--QVPLAFLRHATSKIE 62
Query: 93 K 93
K
Sbjct: 63 K 63
>gi|188586123|ref|YP_001917668.1| DNA mismatch repair protein MutL [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179350810|gb|ACB85080.1| DNA mismatch repair protein MutL [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 680
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 95/199 (47%), Gaps = 21/199 (10%)
Query: 613 DFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERL---SQSTVLNQQPLLRPLK 669
D +V+GQ + I + +++++DQHAA E+ N++ L +S+ L Q ++ P
Sbjct: 489 DLLEYRVVGQIFTTYWILESSDEIYLIDQHAAHERINYQLLMDRYRSSQLKSQQVI-PYT 547
Query: 670 LDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIS 729
L+L ++D +R+ G E ++ VPF+ K F + + DLI
Sbjct: 548 LELDSAGITALEDNLDKLRQCGLEFE----FFGQNTLLVRGVPFAIKDIFDQDAIYDLID 603
Query: 730 TLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLA 789
L + I+S + ML + AC+ SI + +G E++ +L+ L
Sbjct: 604 QLIKHPDNDLDITS-------------LEEMLITIACKKSIKANEKIGAKELKSLLKSLV 650
Query: 790 DLNSPWNCPHGRPTMRHLV 808
+ +P+ CPHGRPT+ +L
Sbjct: 651 ETPTPFTCPHGRPTIINLT 669
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 45/61 (73%)
Query: 19 VVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFK 78
+ +I AG+V++ +S VKEL+ENS+DAG+ +I+I L + G+E +V+DNG GI P + +
Sbjct: 11 ISEKIAAGEVVERPASVVKELIENSIDAGSDNIQIFLSKAGKELIRVIDNGLGIHPEDVE 70
Query: 79 V 79
+
Sbjct: 71 L 71
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 75/162 (46%), Gaps = 15/162 (9%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICK 143
+ +AL +RF N K +L+T G + + + I ++G L P+ +
Sbjct: 174 IINKFALANPNIRFRALNGNKK-----LLQTSGRNDMLEVIANIYGYQTAKKLLPIKYSQ 228
Query: 144 SDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANS----RQYP 199
D + G+++KP R+ Q FFVNDR V K + L L KG ++ +YP
Sbjct: 229 -DGITITGYIAKPELT--RSNRSYQTFFVNDRYV---KSTFLSERLEKGYHTLLPKHRYP 282
Query: 200 IAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQE 241
+I+ VP DVNV P K V F +E I + L + + E
Sbjct: 283 FSILKLQVPDEILDVNVHPAKIHVRFINEKQIGNMLTKAVTE 324
>gi|420176861|ref|ZP_14683255.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM057]
gi|420179455|ref|ZP_14685746.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM053]
gi|394251768|gb|EJD96844.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM057]
gi|394253659|gb|EJD98655.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM053]
Length = 645
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 90/192 (46%), Gaps = 23/192 (11%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADE--KYNFERLSQSTVLNQ-QPLLRPLKLDLT 673
M+++GQ + +II + + +F++DQHAA E KY + R V N+ Q LL PL +
Sbjct: 457 MEIVGQVHGTYIIAQNENGMFMIDQHAAQERIKYEYFREKIGEVTNEVQNLLIPLTFHFS 516
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
+E+++ + D + K G LE G + + + P E +KD+I +
Sbjct: 517 KDEQMIIDQYKDELDKVGVHLEH----FGGHDYIVNSYPVWFPKVEAEEIIKDMIELVLK 572
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLA-SRACRSSIMIGDALGRNEMQKILEHLADLN 792
++ SV ++R A +C+ SI L NEM +++ L +
Sbjct: 573 HK---------------SVDVKKIREDAAIMMSCKKSIKANHYLKNNEMADLIDQLREAE 617
Query: 793 SPWNCPHGRPTM 804
P+ CPHGRP +
Sbjct: 618 DPFTCPHGRPII 629
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 43/62 (69%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ + + ++I AG+V++ SS VKEL+EN++DA AT I I +++ G +VVDNG G
Sbjct: 4 IKELETSLANKIAAGEVVERPSSVVKELLENAIDAQATEINIEVEQSGVSSIRVVDNGTG 63
Query: 72 IS 73
I+
Sbjct: 64 IA 65
>gi|416124305|ref|ZP_11595301.1| DNA mismatch repair protein mutL [Staphylococcus epidermidis
FRI909]
gi|319401415|gb|EFV89625.1| DNA mismatch repair protein mutL [Staphylococcus epidermidis
FRI909]
Length = 645
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 90/192 (46%), Gaps = 23/192 (11%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADE--KYNFERLSQSTVLNQ-QPLLRPLKLDLT 673
M+++GQ + +II + + +F++DQHAA E KY + R V N+ Q LL PL +
Sbjct: 457 MEIVGQVHGTYIIAQNENGMFMIDQHAAQERIKYEYFREKIGEVTNEVQNLLIPLTFHFS 516
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
+E+++ + D + K G LE G + + + P E +KD+I +
Sbjct: 517 KDEQMIIDQYKDELDKVGVHLEH----FGGHDYIVNSYPVWFPKVEAEEIIKDMIELVLK 572
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLA-SRACRSSIMIGDALGRNEMQKILEHLADLN 792
++ SV ++R A +C+ SI L NEM +++ L +
Sbjct: 573 HK---------------SVDVKKIREDAAIMMSCKKSIKANHYLKNNEMADLIDQLREAE 617
Query: 793 SPWNCPHGRPTM 804
P+ CPHGRP +
Sbjct: 618 DPFTCPHGRPII 629
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 43/62 (69%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ + + ++I AG+V++ SS VKEL+EN++DA AT I I +++ G +VVDNG G
Sbjct: 4 IKELETSLANKIAAGEVVERPSSVVKELLENAIDAQATEINIEVEQSGVSSIRVVDNGTG 63
Query: 72 IS 73
I+
Sbjct: 64 IA 65
Score = 39.7 bits (91), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 13/145 (8%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYF 170
+L T GS + + ++GM + L ++ SD +EGF++KP ++ Y
Sbjct: 195 LLSTNGSGRTNEVMAEIYGMKVAKDLVHISGDTSD-YHLEGFVAKPEHSRS----NKHYI 249
Query: 171 --FVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSD 227
F+N R + ++K + E Y + ++PI +N + DVNV P K +V S
Sbjct: 250 SIFINGRYIKNFVLNKAILEGYHTLLTIGRFPICYINIQMDPILVDVNVHPTKLEVRLSK 309
Query: 228 ECS----ILHALREGLQE-IYSPNN 247
E I+ +RE ++ I P N
Sbjct: 310 EDQLYDLIVTKIREAFKDKILIPQN 334
>gi|242242580|ref|ZP_04797025.1| DNA mismatch repair protein MutL [Staphylococcus epidermidis
W23144]
gi|420174934|ref|ZP_14681380.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM061]
gi|420191655|ref|ZP_14697566.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM023]
gi|242234007|gb|EES36319.1| DNA mismatch repair protein MutL [Staphylococcus epidermidis
W23144]
gi|394244467|gb|EJD89809.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM061]
gi|394265806|gb|EJE10453.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM023]
Length = 645
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 90/192 (46%), Gaps = 23/192 (11%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADE--KYNFERLSQSTVLNQ-QPLLRPLKLDLT 673
M+++GQ + +II + + +F++DQHAA E KY + R V N+ Q LL PL +
Sbjct: 457 MEIVGQVHGTYIIAQNENGMFMIDQHAAQERIKYEYFREKIGEVTNEVQNLLIPLTFHFS 516
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
+E+++ + D + K G LE G + + + P E +KD+I +
Sbjct: 517 KDEQMIIDQYKDELDKVGVHLEH----FGGHDYIVNSYPVWFPKVEAEEIIKDMIELVLK 572
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLA-SRACRSSIMIGDALGRNEMQKILEHLADLN 792
++ SV ++R A +C+ SI L NEM +++ L +
Sbjct: 573 HK---------------SVDVKKIREDAAIMMSCKKSIKANHYLKNNEMADLIDQLREAE 617
Query: 793 SPWNCPHGRPTM 804
P+ CPHGRP +
Sbjct: 618 DPFTCPHGRPII 629
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 43/62 (69%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ + + ++I AG+V++ SS VKEL+EN++DA AT I I +++ G +VVDNG G
Sbjct: 4 IKELETSLANKIAAGEVVERPSSVVKELLENAIDAQATEINIEVEQSGISAIRVVDNGTG 63
Query: 72 IS 73
I+
Sbjct: 64 IA 65
Score = 40.4 bits (93), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 13/145 (8%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYF 170
+L T GS + + ++GM + L ++ SD +EGF++KP ++ Y
Sbjct: 195 ILSTNGSGRTNEVMAEIYGMKVAKDLVHISGDTSD-YHLEGFVAKPEHSRS----NKHYI 249
Query: 171 --FVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSD 227
F+N R + ++K + E Y + ++PI +N + DVNV P K +V S
Sbjct: 250 SIFINGRYIKNFVLNKAILEGYHTLLTIGRFPICYINIQMDPILVDVNVHPTKLEVRLSK 309
Query: 228 ECS----ILHALREGLQE-IYSPNN 247
E I+ +RE ++ I P N
Sbjct: 310 EDQLYDLIVTKIREAFKDKILIPQN 334
>gi|55379204|ref|YP_137054.1| DNA mismatch repair protein mutL [Haloarcula marismortui ATCC
43049]
gi|55231929|gb|AAV47348.1| DNA mismatch repair protein mutL [Haloarcula marismortui ATCC
43049]
Length = 746
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 85/194 (43%), Gaps = 19/194 (9%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQ--STVLNQQPLLRPLKLDLTP 674
M+++GQ +++ + D L +VDQHAADE+ N+ERL Q L P++L LT
Sbjct: 548 MRILGQLADTYVVAETDDGLVLVDQHAADERVNYERLKAKFEGETTTQALANPVELGLTA 607
Query: 675 EEEVVASMHMDIIRKNGFSLEEDPHALAGLR-FRLKAVPFSKKITFGVEDVKDLISTLAD 733
E V D + GF A G R ++ +P G + V+D++
Sbjct: 608 REAEVFDRRSDALASLGFHT-----ARTGERSVEVRTLPGVIADAAGPDIVRDVLGAFVA 662
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNS 793
E + +L AC S+ +L ++++L L D +
Sbjct: 663 GDDEAAATVEAAA-----------DELLGDLACYPSVTGNTSLTEGSVRELLAALDDCEN 711
Query: 794 PWNCPHGRPTMRHL 807
P+ CPHGRPT+ H+
Sbjct: 712 PYACPHGRPTVIHI 725
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 42/61 (68%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ ++ V RI AG+V++ +S VKELVEN++DA A+ +++ ++ G + +V D+G G
Sbjct: 33 IQRLDDQTVERIAAGEVVERPASVVKELVENAIDADASRVDVVVEAGGTDGIRVTDDGIG 92
Query: 72 I 72
+
Sbjct: 93 M 93
Score = 47.8 bits (112), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 81/206 (39%), Gaps = 42/206 (20%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPV-----AICKSDSCK---------VEGFLSKP 156
T G L++ +++V+G + + V A D V G +S P
Sbjct: 226 TFSTTGQGDLRETVMSVYGREVAESMISVGAGSEATGSGDEMDSFPDGPLDGVHGLVSHP 285
Query: 157 GQGSGRNLGDRQYF--FVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACD 213
N R+Y +VN R V V V + Y + +YP A++ VP D
Sbjct: 286 ET----NRAGREYLSTYVNGRYVRAGTVRDAVIDAYGTQIAPDRYPFAVLFLDVPAGDVD 341
Query: 214 VNVTPDKRKVFFSDECSILHA---------LREGLQEIYSPNNASYSVNKVEQL-IEPEK 263
VNV P K +V F+D+ + LREGL +P S EQ I PE
Sbjct: 342 VNVHPRKMEVRFADDEGVREQVRTAVEDALLREGLLRSTAPRGRSAP----EQTEITPES 397
Query: 264 SGPS-SGAESCMFLEQLSPDGNGCIE 288
G + SG E+ +P+G I+
Sbjct: 398 DGATDSGG------ERAAPNGRDAID 417
>gi|418634044|ref|ZP_13196442.1| DNA mismatch repair protein [Staphylococcus epidermidis VCU129]
gi|420189480|ref|ZP_14695454.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM037]
gi|420204219|ref|ZP_14709779.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM015]
gi|374838036|gb|EHS01593.1| DNA mismatch repair protein [Staphylococcus epidermidis VCU129]
gi|394262030|gb|EJE06815.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM037]
gi|394274233|gb|EJE18658.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM015]
Length = 645
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 90/192 (46%), Gaps = 23/192 (11%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADE--KYNFERLSQSTVLNQ-QPLLRPLKLDLT 673
M+++GQ + +II + + +F++DQHAA E KY + R V N+ Q LL PL +
Sbjct: 457 MEIVGQVHGTYIIAQNENGMFMIDQHAAQERIKYEYFREKIGEVTNEVQNLLIPLTFHFS 516
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
+E+++ + D + K G LE G + + + P E +KD+I +
Sbjct: 517 KDEQMIIDQYKDELDKVGVHLEH----FGGHDYIVNSYPVWFPKVEAEEIIKDMIELVLK 572
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLA-SRACRSSIMIGDALGRNEMQKILEHLADLN 792
++ SV ++R A +C+ SI L NEM +++ L +
Sbjct: 573 HK---------------SVDVKKIREDAAIMMSCKKSIKANHYLKNNEMADLIDQLREAE 617
Query: 793 SPWNCPHGRPTM 804
P+ CPHGRP +
Sbjct: 618 DPFTCPHGRPII 629
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 43/62 (69%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ + + ++I AG+V++ SS VKEL+EN++DA AT I I +++ G +VVDNG G
Sbjct: 4 IKELETSLANKIAAGEVVERPSSVVKELLENAIDAQATEINIEVEQSGVSSIRVVDNGTG 63
Query: 72 IS 73
I+
Sbjct: 64 IA 65
Score = 39.7 bits (91), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 13/145 (8%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYF 170
+L T GS + + ++GM + L ++ SD +EGF++KP ++ Y
Sbjct: 195 LLSTNGSGRTNEVMAEIYGMKVAKDLVHISGDTSD-YHLEGFVAKPEHSRS----NKHYI 249
Query: 171 --FVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSD 227
F+N R + ++K + E Y + ++PI +N + DVNV P K +V S
Sbjct: 250 SIFINGRYIKNFVLNKAILEGYHTLLTIGRFPICYINIQMDPILVDVNVHPTKLEVRLSK 309
Query: 228 ECS----ILHALREGLQE-IYSPNN 247
E I+ +RE ++ I P N
Sbjct: 310 EDQLYDLIVTKIREAFKDKILIPQN 334
>gi|355628055|ref|ZP_09049570.1| hypothetical protein HMPREF1020_03649 [Clostridium sp. 7_3_54FAA]
gi|354819948|gb|EHF04380.1| hypothetical protein HMPREF1020_03649 [Clostridium sp. 7_3_54FAA]
Length = 684
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 95/202 (47%), Gaps = 21/202 (10%)
Query: 606 ERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTV---LNQQ 662
E+L K+ +IGQ + + + +L+I+DQHAA EK +E+ S Q
Sbjct: 485 EKLLTKQARNEHVLIGQLFDTYWLVQFHDNLYIIDQHAAHEKVLYEKTMASLKKREYTSQ 544
Query: 663 PLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVE 722
+ P+ L L+ EE++ +M+ GF +E G + ++AVP + F +
Sbjct: 545 MINPPIILTLSGNEELMLKKYMEHFTAVGFEIEH----FGGKEYAVRAVPAN---LFSIA 597
Query: 723 DVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQ 782
K+L+ + D D D P + +AS +C++++ A+ E
Sbjct: 598 K-KELLMEMIDGL----------TDGVDQGTPDIINEKIASMSCKAAVKGNHAMSAAEAD 646
Query: 783 KILEHLADLNSPWNCPHGRPTM 804
+++ L +L +P+ CPHGRPT+
Sbjct: 647 SLIDELLELENPYACPHGRPTI 668
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 60/119 (50%), Gaps = 8/119 (6%)
Query: 112 LKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQY-- 169
L T G+ +LKD I T+FG I L V ++ KVEGF+ KP G +R Y
Sbjct: 197 LHTSGNHNLKDIIYTIFGREIAANLIAVQ-SGAEPVKVEGFIGKPLIARG----NRNYEN 251
Query: 170 FFVNDRPVDLPKVSKLVNELYKG-ANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSD 227
+F+N R + ++K + + YK +YP ++ F + DVNV P K ++ F D
Sbjct: 252 YFINGRYIKSSLINKAIEDAYKPFMMQHKYPFTMLQFTIEPEFLDVNVHPAKMELRFRD 310
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 45/61 (73%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ +++ +++I AG+VI+ +S VKEL+EN++DA +T++ + +++ G +V DNGCG
Sbjct: 4 IQVLDQNTINQIAAGEVIERPASVVKELLENAVDAKSTAVTVEIRDGGLSMIRVTDNGCG 63
Query: 72 I 72
I
Sbjct: 64 I 64
>gi|323691986|ref|ZP_08106234.1| DNA mismatch repair protein MutL [Clostridium symbiosum WAL-14673]
gi|323503909|gb|EGB19723.1| DNA mismatch repair protein MutL [Clostridium symbiosum WAL-14673]
Length = 684
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 95/202 (47%), Gaps = 21/202 (10%)
Query: 606 ERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTV---LNQQ 662
E+L K+ +IGQ + + + +L+I+DQHAA EK +E+ S Q
Sbjct: 485 EKLLTKQARNEHVLIGQLFDTYWLVQFHDNLYIIDQHAAHEKVLYEKTMASLKKREYTSQ 544
Query: 663 PLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVE 722
+ P+ L L+ EE++ +M+ GF +E G + ++AVP + F +
Sbjct: 545 MINPPIILTLSGNEELMLKKYMEHFTAVGFEIEH----FGGKEYAVRAVPAN---LFSIA 597
Query: 723 DVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQ 782
K+L+ + D D D P + +AS +C++++ A+ E
Sbjct: 598 K-KELLMEMIDGL----------TDGVDQGTPDIINEKIASMSCKAAVKGNHAMSAAEAD 646
Query: 783 KILEHLADLNSPWNCPHGRPTM 804
+++ L +L +P+ CPHGRPT+
Sbjct: 647 SLIDELLELENPYACPHGRPTI 668
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 60/119 (50%), Gaps = 8/119 (6%)
Query: 112 LKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQY-- 169
L T G+ +LKD I T+FG I L V +D KVEGF+ KP G +R Y
Sbjct: 197 LHTSGNHNLKDIIYTIFGREIAANLIAVQ-SGADPVKVEGFIGKPLIARG----NRNYEN 251
Query: 170 FFVNDRPVDLPKVSKLVNELYKG-ANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSD 227
+F+N R + ++K + + YK +YP ++ F + DVNV P K ++ F D
Sbjct: 252 YFINGRYIKSSLINKAIEDAYKPFMMQHKYPFTMLQFTIEPEFLDVNVHPAKMELRFRD 310
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 45/61 (73%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ +++ +++I AG+VI+ +S VKEL+EN++DA +T++ + +++ G +V DNGCG
Sbjct: 4 IQVLDQNTINQIAAGEVIERPASVVKELLENAVDAKSTAVTVEIRDGGLSMIRVTDNGCG 63
Query: 72 I 72
I
Sbjct: 64 I 64
>gi|418630414|ref|ZP_13192896.1| DNA mismatch repair protein [Staphylococcus epidermidis VCU128]
gi|374837955|gb|EHS01513.1| DNA mismatch repair protein [Staphylococcus epidermidis VCU128]
Length = 645
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 90/192 (46%), Gaps = 23/192 (11%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADE--KYNFERLSQSTVLNQ-QPLLRPLKLDLT 673
M+++GQ + +II + + +F++DQHAA E KY + R V N+ Q LL PL +
Sbjct: 457 MEIVGQVHGTYIIAQNENGMFMIDQHAAQERIKYEYFREKIGEVTNEVQNLLIPLTFHFS 516
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
+E+++ + D + K G LE G + + + P E +KD+I +
Sbjct: 517 KDEQMIIDQYKDELDKVGVHLEH----FGGHDYIVNSYPVWFPKVEAEEIIKDMIELVLK 572
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLA-SRACRSSIMIGDALGRNEMQKILEHLADLN 792
++ SV ++R A +C+ SI L NEM +++ L +
Sbjct: 573 HK---------------SVDVKKIREDAAIMMSCKKSIKANHYLKNNEMADLIDQLREAE 617
Query: 793 SPWNCPHGRPTM 804
P+ CPHGRP +
Sbjct: 618 DPFTCPHGRPII 629
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 43/62 (69%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ + + ++I AG+V++ SS VKEL+EN++DA AT I I +++ G +VVDNG G
Sbjct: 4 IKELETSLANKIAAGEVVERPSSVVKELLENAIDAQATEINIEVEQSGISSIRVVDNGTG 63
Query: 72 IS 73
I+
Sbjct: 64 IA 65
Score = 39.7 bits (91), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 13/145 (8%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYF 170
+L T GS + + ++GM + L ++ SD +EGF++KP ++ Y
Sbjct: 195 LLSTNGSGRTNEVMAEIYGMKVAKDLVHISGDTSD-YHLEGFVAKPEHSRS----NKHYI 249
Query: 171 --FVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSD 227
F+N R + ++K + E Y + ++PI +N + DVNV P K +V S
Sbjct: 250 SIFINGRYIKNFVLNKAILEGYHTLLTIGRFPICYINIQMDPILVDVNVHPTKLEVRLSK 309
Query: 228 ECS----ILHALREGLQE-IYSPNN 247
E I+ +RE ++ I P N
Sbjct: 310 EDQLYDLIVTKIREAFKDKILIPQN 334
>gi|418615565|ref|ZP_13178507.1| DNA mismatch repair protein [Staphylococcus epidermidis VCU118]
gi|374817004|gb|EHR81195.1| DNA mismatch repair protein [Staphylococcus epidermidis VCU118]
Length = 645
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 90/192 (46%), Gaps = 23/192 (11%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADE--KYNFERLSQSTVLNQ-QPLLRPLKLDLT 673
M+++GQ + +II + + +F++DQHAA E KY + R V N+ Q LL PL +
Sbjct: 457 MEIVGQVHGTYIIAQNENGMFMIDQHAAQERIKYEYFREKIGEVTNEVQNLLIPLTFHFS 516
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
+E+++ + D + K G LE G + + + P E +KD+I +
Sbjct: 517 KDEQMIIDQYKDELDKVGVHLEH----FGGHDYIVNSYPVWFPKVEAEEIIKDMIELVLK 572
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLA-SRACRSSIMIGDALGRNEMQKILEHLADLN 792
++ SV ++R A +C+ SI L NEM +++ L +
Sbjct: 573 HK---------------SVDVKKIREDAAIMMSCKKSIKANHYLKNNEMADLIDQLREAE 617
Query: 793 SPWNCPHGRPTM 804
P+ CPHGRP +
Sbjct: 618 DPFTCPHGRPII 629
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 43/62 (69%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ + + ++I AG+V++ SS VKEL+EN++DA AT I I +++ G +VVDNG G
Sbjct: 4 IKELETSLANKIAAGEVVERPSSVVKELLENAIDAQATEINIEVEQSGISSIRVVDNGTG 63
Query: 72 IS 73
I+
Sbjct: 64 IA 65
Score = 39.7 bits (91), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 13/145 (8%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYF 170
+L T GS + + ++GM + L ++ SD +EGF++KP ++ Y
Sbjct: 195 LLSTNGSGRTNEVMAEIYGMKVAKDLVHISGDTSD-YHLEGFVAKPEHSRS----NKHYI 249
Query: 171 --FVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSD 227
F+N R + ++K + E Y + ++PI +N + DVNV P K +V S
Sbjct: 250 SIFINGRYIKNFVLNKAILEGYHTLLTIGRFPICYINIQMDPILVDVNVHPTKLEVRLSK 309
Query: 228 ECS----ILHALREGLQE-IYSPNN 247
E I+ +RE ++ I P N
Sbjct: 310 EDQLYDLIVTKIREAFKDKILIPQN 334
>gi|261406194|ref|YP_003242435.1| DNA mismatch repair protein MutL [Paenibacillus sp. Y412MC10]
gi|261282657|gb|ACX64628.1| DNA mismatch repair protein MutL [Paenibacillus sp. Y412MC10]
Length = 660
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 125/299 (41%), Gaps = 33/299 (11%)
Query: 514 DLSVAASHLQFSGSILDAPVPSSSLDICSTLQFSIQDLRKRRQQRLSIMQSSCHTSGSVK 573
DL + S + +G P P ++ TL S +++ S + T+ + +
Sbjct: 371 DLEIPGSDERSAGGNTPLPTPPAAWPDKQTLATSPNCIKR------SYGDGTAETAAASQ 424
Query: 574 MRRCFAAATLELSQPENEERKARALAAATTELERLFRKE-----DFGRMKVIGQFNLGFI 628
MR A+++ S NE R + A T E + F + +IGQ + ++
Sbjct: 425 MRETAASSSYR-SDYRNEARGGAGIPAVTKEWLQAVSGPAPEIPPFPELTLIGQHHGTYL 483
Query: 629 IGKLDQDLFIVDQHAADEKYNFERLSQ---STVLNQQPLLRPLKLDLTPEEEVVASMHMD 685
I + D L+++DQHAA E+ N+E + + Q LL P+ L+ TP E +
Sbjct: 484 IAQNDTGLYLIDQHAAHERINYEYYYEQFGNPADASQELLLPITLEFTPSESEKVKDRLH 543
Query: 686 IIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYK 745
K G +E G F +++ PF F + K +I +A+ +++
Sbjct: 544 WFEKVGVYME----FFGGHTFLVRSHPF----WFPKGEEKAIIEEMAE-----WVLNERN 590
Query: 746 MDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTM 804
+D A S + +C++SI L E +++ L P+ CPHGRP +
Sbjct: 591 IDIAKLRETSSIMC-----SCKASIKANQKLTEQEAMTLIQRLGACRQPYTCPHGRPIV 644
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 56/83 (67%), Gaps = 2/83 (2%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR +++ + ++I AG+V++ +S VKELVEN++DAG+T I+++++E G + +V DNG G
Sbjct: 4 IRILDEHIANQIAAGEVVERPASVVKELVENAIDAGSTKIDVSVEEGGLDSIRVTDNGAG 63
Query: 72 ISPNNFKVRAVFLCQAYALIAKG 94
I P + F A + IA+G
Sbjct: 64 IDPED--CETAFYRHATSKIAEG 84
>gi|299535289|ref|ZP_07048612.1| DNA mismatch repair protein [Lysinibacillus fusiformis ZC1]
gi|424737168|ref|ZP_18165624.1| DNA mismatch repair protein [Lysinibacillus fusiformis ZB2]
gi|298729271|gb|EFI69823.1| DNA mismatch repair protein [Lysinibacillus fusiformis ZC1]
gi|422949000|gb|EKU43376.1| DNA mismatch repair protein [Lysinibacillus fusiformis ZB2]
Length = 620
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 105/226 (46%), Gaps = 24/226 (10%)
Query: 587 QPENEERKARALAAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADE 646
Q E E +A + LE + KE F ++V+GQ + +I+ +++ +++DQHAA E
Sbjct: 401 QIEAETIDEVTIAEQSEILEEMPTKEPFPELEVVGQIHGTYIVAQMEDGFYLIDQHAAQE 460
Query: 647 --KYNF--ERLSQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALA 702
KY F E++ Q +Q LL PL +E ++ H + G LEE +
Sbjct: 461 RIKYEFFREKVGQVNPHERQALLLPLTFHYAADEALILREHRHELEAVGVFLEEFGQSSF 520
Query: 703 GLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVR-AML 761
+R P ++ E ++DLI ++++ K D ++R A
Sbjct: 521 VVREHPSWFPQGEE----QEIIEDLIE---------QVLTTKKADI------KKLREAAA 561
Query: 762 ASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHL 807
+C+ SI L + +M+ +L L + ++P+ CPHGRP + H
Sbjct: 562 IMMSCKKSIKANYYLTKEQMETLLRDLRNADNPFTCPHGRPVLIHF 607
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 46/61 (75%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ +++ + ++I AG+V++ +S VKELVEN++DAG+TSI++ L E G QV+DNG G
Sbjct: 4 IQIMDEWLSNKIAAGEVVERPASVVKELVENAIDAGSTSIDVFLLEAGLTSIQVIDNGSG 63
Query: 72 I 72
+
Sbjct: 64 M 64
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 70/153 (45%), Gaps = 6/153 (3%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAI-CKSDSCKVEGFLSKPGQGSGRNLGDRQY 169
+L+T G ++ + ++G I+N + V+ +S ++ GF+S P R +
Sbjct: 194 LLQTNGRGDVQQVLAAIYG--IHNAKKMVSFQGESHDYRISGFVSLPE--VTRASKNYMT 249
Query: 170 FFVNDRPVDLPKVSK-LVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDE 228
FVN R V V K +V+ + ++PI ++ DVNV P K ++ S E
Sbjct: 250 LFVNGRWVKHYLVQKAIVDAYHTYLPIERFPIVVLYIEGDPYLTDVNVHPAKHQIRLSKE 309
Query: 229 CSILHALREGLQEIYSPNNASYSVNKVEQLIEP 261
+L + E ++E + K E++++P
Sbjct: 310 ADLLKLIEETIRETIRNIIRVPQMEKKEKIVKP 342
>gi|291459238|ref|ZP_06598628.1| DNA mismatch repair protein MutL [Oribacterium sp. oral taxon 078
str. F0262]
gi|291418492|gb|EFE92211.1| DNA mismatch repair protein MutL [Oribacterium sp. oral taxon 078
str. F0262]
Length = 675
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 94/203 (46%), Gaps = 23/203 (11%)
Query: 606 ERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERL----SQSTVLNQ 661
ER ++ ++IGQ + + + LF++DQHAA EK NFERL + L+Q
Sbjct: 476 ERFLSEKARTEQRIIGQLFDTYWLIEYGDKLFLIDQHAAHEKVNFERLMKRFREKKALSQ 535
Query: 662 QPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGV 721
L P+ L L+ EE++ ++ R+ G+ + E L G + + AVP
Sbjct: 536 Y-LSPPIVLTLSSREELILQRYLSYFRELGYEISE----LGGRDYSVSAVP--------- 581
Query: 722 EDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEM 781
D+ + + + TA+S+ +AS +C++++ L EM
Sbjct: 582 ADLPRIGKKELLLELLDELCEESGRHTAESIYDR-----IASMSCKAAVKGNMRLSFREM 636
Query: 782 QKILEHLADLNSPWNCPHGRPTM 804
+L L L +P+ CPHGRPT+
Sbjct: 637 DALLSELMSLENPYACPHGRPTI 659
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 53/80 (66%), Gaps = 2/80 (2%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR +++ +++I AG+VI+ SS KEL+EN++DAGA+++ + +++ G +V DNG G
Sbjct: 29 IRILSEETINQIAAGEVIERPSSIAKELLENAVDAGASAVSVEIRDGGISLLRVTDNGSG 88
Query: 72 ISPNNFKVRAVFLCQAYALI 91
I+ +VR FL A + I
Sbjct: 89 IAKG--EVRTAFLRHATSKI 106
Score = 40.0 bits (92), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 72/168 (42%), Gaps = 19/168 (11%)
Query: 116 GSSSLKDNIITVFGMNIYNCLEPVAICKSDS-------CKVEGFLSKPGQGSGRNLGDR- 167
G + D + V+G + L P++ S ++ GF+ KP N +R
Sbjct: 226 GKGAPLDAVYAVYGRELRGQLIPLSGSYLPSKETGRPALRISGFVGKPST----NRSNRS 281
Query: 168 -QYFFVNDRPVDLPKVSKLVNELYKG-ANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFF 225
+ FFVN R V P +++ + + + ++P A++ + DVNV P K +V F
Sbjct: 282 CELFFVNCRHVRSPLLTRALEDGCRAFLMQHKFPFAVVMLELDPAIVDVNVHPQKLEVRF 341
Query: 226 SDECSILHALREGLQEIYSPNN--ASYSVNKVEQLIEPEKSGPSSGAE 271
SD I A+ + ++ A K E +PE+ GPS E
Sbjct: 342 SDGEGIYTAVFDAIERALHETEMIADGEPPKRE---DPEERGPSPAPE 386
>gi|418329433|ref|ZP_12940501.1| DNA mismatch repair protein [Staphylococcus epidermidis 14.1.R1.SE]
gi|365230468|gb|EHM71563.1| DNA mismatch repair protein [Staphylococcus epidermidis 14.1.R1.SE]
Length = 645
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 90/192 (46%), Gaps = 23/192 (11%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADE--KYNFERLSQSTVLNQ-QPLLRPLKLDLT 673
M+++GQ + +II + + +F++DQHAA E KY + R V N+ Q LL PL +
Sbjct: 457 MEIVGQVHGTYIIAQNENGMFMIDQHAAQERIKYEYFREKIGEVTNEVQNLLIPLTFHFS 516
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
+E+++ + D + K G LE G + + + P E +KD+I +
Sbjct: 517 KDEQMIIDQYKDELDKVGVHLEH----FGGHDYIVNSYPVWFPKVEAEEIIKDMIELVLK 572
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLA-SRACRSSIMIGDALGRNEMQKILEHLADLN 792
++ SV ++R A +C+ SI L NEM +++ L +
Sbjct: 573 HK---------------SVDVKKIREDAAIMMSCKKSIKANHYLKNNEMADLIDQLREAE 617
Query: 793 SPWNCPHGRPTM 804
P+ CPHGRP +
Sbjct: 618 DPFTCPHGRPII 629
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 43/62 (69%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ + + ++I AG+V++ SS VKEL+EN++DA AT I I +++ G +VVDNG G
Sbjct: 4 IKELETSLANKIAAGEVVERPSSVVKELLENAIDAQATEINIEVEQSGISAIRVVDNGTG 63
Query: 72 IS 73
I+
Sbjct: 64 IA 65
Score = 40.4 bits (93), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 13/145 (8%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYF 170
+L T GS + + ++GM + L ++ SD +EGF++KP ++ Y
Sbjct: 195 ILSTNGSGRTNEVMAEIYGMKVAKDLVHISGDTSD-YHLEGFVAKPEHSRS----NKHYI 249
Query: 171 --FVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSD 227
F+N R + ++K + E Y + ++PI +N + DVNV P K +V S
Sbjct: 250 SIFINGRYIKNFVLNKAILEGYHTLLTIGRFPICYINIQMDPILVDVNVHPTKLEVRLSK 309
Query: 228 ECS----ILHALREGLQE-IYSPNN 247
E I+ +RE ++ I P N
Sbjct: 310 EDQLYDLIVTKIREAFKDKILIPQN 334
>gi|374581417|ref|ZP_09654511.1| DNA mismatch repair protein MutL [Desulfosporosinus youngiae DSM
17734]
gi|374417499|gb|EHQ89934.1| DNA mismatch repair protein MutL [Desulfosporosinus youngiae DSM
17734]
Length = 649
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 89/185 (48%), Gaps = 21/185 (11%)
Query: 623 FNLGFIIGKLDQDLFIVDQHAADEKYNFERL---SQSTVLNQQPLLRPLKLDLTPEEEVV 679
FN +I+ + L ++DQHAA E+ N+ERL + + Q LL PL ++ T +EE V
Sbjct: 468 FN-TYILATDGKILLMIDQHAAHERINYERLLKEFKQAEKSSQALLIPLPMEFTLQEEQV 526
Query: 680 ASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECS 739
++ I+ + GF LE+ + L+ VP G DL+ D
Sbjct: 527 LLENLWILNEMGFILEQ----FGSRTYLLRGVPAQT----GAFQADDLLRQFIDQ----- 573
Query: 740 IISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPH 799
++ T D + + + AC+ SI D+L EM++++ L+ +P+ CPH
Sbjct: 574 VLLKNSPPTFDKILEEWIYML----ACKESIKANDSLNLLEMEQLIASLSRTQNPYTCPH 629
Query: 800 GRPTM 804
GRPTM
Sbjct: 630 GRPTM 634
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 67/131 (51%), Gaps = 4/131 (3%)
Query: 110 VVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQY 169
VVL+T G L++ I V G I L PV + + ++GF+S P R+ QY
Sbjct: 196 VVLQTSGRGDLREAIAAVLGHAIARQLIPVNV-HHEKWHLQGFISPPSLV--RSSRQAQY 252
Query: 170 FFVNDRPVDLPKVSKLVNELYKG-ANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDE 228
F +N R + P +S+ + E Y ++ +PIA+++ VP DVNV P K V F +E
Sbjct: 253 FMINGRIIRSPLLSRALAEGYHTLIPAKLHPIAVLHLSVPPSDYDVNVHPTKMDVRFKEE 312
Query: 229 CSILHALREGL 239
+ +RE +
Sbjct: 313 QELTLFIREAV 323
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 39/61 (63%)
Query: 22 RICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFKVRA 81
+I AG+V++ +S VKELVENSLDAGA I+I ++ G +V D+G GI + +
Sbjct: 15 QISAGEVVERPASVVKELVENSLDAGANHIDITVEGNGVPLIRVRDDGNGIGSEDLPLAV 74
Query: 82 V 82
+
Sbjct: 75 I 75
>gi|297623074|ref|YP_003704508.1| DNA mismatch repair protein MutL [Truepera radiovictrix DSM 17093]
gi|297164254|gb|ADI13965.1| DNA mismatch repair protein MutL [Truepera radiovictrix DSM 17093]
Length = 558
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 97/209 (46%), Gaps = 31/209 (14%)
Query: 611 KEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQP---LLRP 667
+ F ++ +G + +++ + + L++VDQHAA E+ FE L + Q+P L P
Sbjct: 351 RHRFPALRYLGVYRELYLLAEGEGQLWVVDQHAAHERVLFEELERRY--RQEPPVELPAP 408
Query: 668 LKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFG-VEDVKD 726
L L+PEEE + + +R G LE G R+R++ VP G E +
Sbjct: 409 ELLPLSPEEEATYAARREALRAAGLELEP----FGGGRYRVRRVP---AFLLGHPELLPG 461
Query: 727 LISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILE 786
++S +G AD RA+LA AC +I G L + Q +L+
Sbjct: 462 VVSGALGRRG------------ADEAW----RAVLARLACLPAIKAGRTL--KDPQALLD 503
Query: 787 HLADLNSPWNCPHGRPTMRHLVDLTTIRK 815
LA +PW CPHGRPT L +L R+
Sbjct: 504 ALARCETPWACPHGRPTALVLSELELARR 532
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 39/61 (63%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR + VV I AG+V+ + +KEL+EN+LDAGAT +E+AL G E V DNG G
Sbjct: 4 IRRLPPEVVREIAAGEVVTAPADVLKELLENALDAGATRLEVALDGGGTERVAVRDNGAG 63
Query: 72 I 72
I
Sbjct: 64 I 64
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 64/145 (44%), Gaps = 11/145 (7%)
Query: 117 SSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRP 176
++ + ++G N L VA + + + G LS+P R DR VN RP
Sbjct: 203 GGGFREAVKFLWGAVTANRLLGVA-AEGEGYALAGLLSRPELSRPRR--DRLLLAVNGRP 259
Query: 177 VD-----LPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSI 231
V+ L V+ EL + + +P+ ++N VP VN PDK +V F ++
Sbjct: 260 VEWDEELLKAVTHAYRELLRAGH---FPVGVLNLTVPPEQVLVNTAPDKSRVRFLAPEAL 316
Query: 232 LHALREGLQEIYSPNNASYSVNKVE 256
LRE ++ N + S+ +++
Sbjct: 317 AAFLREAVRATLGANPLAPSLPELQ 341
>gi|390559642|ref|ZP_10243945.1| DNA mismatch repair protein MutL (fragment) [Nitrolancetus
hollandicus Lb]
gi|390173785|emb|CCF83244.1| DNA mismatch repair protein MutL (fragment) [Nitrolancetus
hollandicus Lb]
Length = 283
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 94/196 (47%), Gaps = 27/196 (13%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQ---QPLLRPLKLDLT 673
++V+GQ + +II + ++++DQHAA E+ ERL +V + Q LL PL ++
Sbjct: 98 LRVLGQVGITYIIAEGPDGMYLIDQHAAHERILLERLLARSVQAEPDAQTLLEPLVVE-- 155
Query: 674 PEEEVVASMHM--DIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTL 731
PE + S+ + + + GF LE + G ++AVP D K + +
Sbjct: 156 PEARQLESLEQCAEGLARLGFQLE----SFGGSAIAIRAVP----AVMSRRDPKSTLLAI 207
Query: 732 ADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADL 791
D + ++DT + AS AC S+I GD L +EM++++ L
Sbjct: 208 LDEVAKGGR-EQAQLDT-----------LAASTACHSAIRAGDPLSLSEMRELIIQLEQC 255
Query: 792 NSPWNCPHGRPTMRHL 807
SP C HGRPTM HL
Sbjct: 256 ASPRVCAHGRPTMLHL 271
>gi|194337682|ref|YP_002019476.1| DNA mismatch repair protein MutL [Pelodictyon phaeoclathratiforme
BU-1]
gi|238693415|sp|B4SGC3.1|MUTL_PELPB RecName: Full=DNA mismatch repair protein MutL
gi|194310159|gb|ACF44859.1| DNA mismatch repair protein MutL [Pelodictyon phaeoclathratiforme
BU-1]
Length = 626
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 91/189 (48%), Gaps = 23/189 (12%)
Query: 620 IGQFNLGFIIGKLDQDLFIVDQHAADEKYNFER---LSQSTVLNQQPLLRPLKLDLTPEE 676
I Q + ++I ++ L I+DQH A E+ +ER + V N Q LL P K++ P E
Sbjct: 442 IWQLHNKYLICQIKTGLMIIDQHVAHERVLYERAVDVMNQNVPNSQQLLFPQKVEFRPWE 501
Query: 677 -EVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQ 735
E+ + D+ R GF+L ++ VP K V ++D+I+ DN
Sbjct: 502 YEIFEEIREDLYRL-GFNL----RLFGNKTIMIEGVPQDVKPGSEVTILQDMIAEYQDNA 556
Query: 736 GECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPW 795
S K+D D++ S +CR++IM G L EM+ ++++L P+
Sbjct: 557 ------SKLKLDKRDNLA--------KSYSCRNAIMAGQKLSLEEMRSLIDNLFATREPY 602
Query: 796 NCPHGRPTM 804
+CPHGRP +
Sbjct: 603 SCPHGRPVI 611
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 42/54 (77%)
Query: 19 VVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGI 72
V ++I AG+V++ +S VKEL+EN++DAGA I +A+K+ G+E ++VDNG G+
Sbjct: 11 VANKISAGEVVQRPASVVKELLENAIDAGADKITVAIKDAGKELIRIVDNGAGM 64
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 143 KSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGA-NSRQYPIA 201
++D ++G+L KP R L QYFFVN R V +S+ V + Y RQ P
Sbjct: 226 ENDYLSIKGYLGKPAMQKRRKLD--QYFFVNRRVVQNRMLSQAVQQAYGDLLVERQTPFV 283
Query: 202 IMNFIVPTRACDVNVTPDKRKVFFSDECSI 231
++ + DVNV P K ++ F DE ++
Sbjct: 284 LLFLTIDPSRIDVNVHPAKMEIRFDDERNV 313
>gi|258511467|ref|YP_003184901.1| DNA mismatch repair protein MutL [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|257478193|gb|ACV58512.1| DNA mismatch repair protein MutL [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
Length = 622
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 100/204 (49%), Gaps = 38/204 (18%)
Query: 610 RKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERL---SQSTVLNQQPLLR 666
R D+ R++ IGQ +I+ + DL+I+DQHAA E+ +E + Q + PLL
Sbjct: 428 RPADW-RLRPIGQALRMYILAEDGNDLYIIDQHAAHERVLYEDVLDAWQQGDIQPMPLLT 486
Query: 667 PLKLDLTPE--EEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDV 724
PL+L LTP EEV+A + + GF + DP FGV +
Sbjct: 487 PLELSLTPSAFEEVMA--RREELLALGFEI--DP--------------------FGVHTI 522
Query: 725 KDLISTLADN-QG-ECSIISSYKMDTADSVCPSR----VRAMLASRACRSSIMIGDALGR 778
L+ T+ D+ QG + + + +D S+ P + LA+RAC+++I D+L
Sbjct: 523 --LVRTIPDSWQGLDYAALVRDVLDDLASMGPKATARDIMHRLATRACKAAIKAHDSLTM 580
Query: 779 NEMQKILEHLADLNSPWNCPHGRP 802
EM+ + L P++CPHGRP
Sbjct: 581 PEMEALCRRLTRARDPYHCPHGRP 604
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 43/62 (69%)
Query: 15 INKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISP 74
+ K + +I AG+V+ +S VKELVENSLDAGAT IE++L E G VVD+G G+SP
Sbjct: 1 MPKVMADQIAAGEVVARPASCVKELVENSLDAGATRIEVSLAEGGIACVTVVDDGEGMSP 60
Query: 75 NN 76
+
Sbjct: 61 ED 62
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 69/158 (43%), Gaps = 11/158 (6%)
Query: 78 KVRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLE 137
+ R+V + Q +L V FVC + + V+ +T G ++ ++G+ L
Sbjct: 162 QARSVEVVQRESLAHPEVAFVC-----RTERQVLFQTPGRGDAREVWAALYGVGEARMLI 216
Query: 138 PVAICKSDSCKVEGFLSKPGQG-SGRNLGDRQYFFVNDRPVDLPKVSKLVNELY-KGANS 195
V D + G++ +P Q S R G Y F+N RPV P V + V Y +
Sbjct: 217 EVRGTTGDYA-LRGYVGRPTQARSSRQHG---YLFINGRPVRNPAVQQAVERAYGERLMV 272
Query: 196 RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILH 233
+YP+ + + D NV P K +V S+E + H
Sbjct: 273 GRYPVYALYLEMDPALVDPNVHPQKWEVRLSEERDVCH 310
>gi|425736892|ref|ZP_18855168.1| DNA mismatch repair protein [Staphylococcus massiliensis S46]
gi|425483364|gb|EKU50516.1| DNA mismatch repair protein [Staphylococcus massiliensis S46]
Length = 657
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 95/192 (49%), Gaps = 23/192 (11%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADE--KYNFERLSQSTVLNQ-QPLLRPLKLDLT 673
M+V+GQ + +II + D+ +F++DQHAA E KY + R V N+ Q LL PL + +
Sbjct: 469 MEVVGQVHGTYIIAQNDEGMFMIDQHAAQERIKYEYFRDKIGEVKNENQNLLIPLTFNFS 528
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
+E ++ + + + G LE + + + P + F ++V+D+I + D
Sbjct: 529 KDEMMIIEQYRQSLEEVGVFLEH----FGSNSYIVSSYP----VWFPKDEVEDIIKDMID 580
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLA-SRACRSSIMIGDALGRNEMQKILEHLADLN 792
+I+ K+D ++R A +C+ SI L +EM ++ L ++
Sbjct: 581 -----YVIAHKKVDI------KKIREEAAIMMSCKKSIKANHYLKNSEMHDLINQLREME 629
Query: 793 SPWNCPHGRPTM 804
P+ CPHGRP +
Sbjct: 630 DPFTCPHGRPII 641
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 44/66 (66%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ + + ++I AG+V++ S VKELVEN++DA AT I I +KE G + +VVDNG G
Sbjct: 4 IKELQTSLANKIAAGEVVERPGSVVKELVENAIDAQATEINIEVKESGVQSIRVVDNGSG 63
Query: 72 ISPNNF 77
I ++
Sbjct: 64 IEEDDL 69
Score = 42.0 bits (97), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 21/150 (14%)
Query: 110 VVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQY 169
+V+KT GS + + ++GM + L ++ SD +EGF++KP ++ Y
Sbjct: 194 LVMKTNGSGRTNEVMAEIYGMKVAKNLVHISGDTSD-YHIEGFVAKPEHSRS----NKHY 248
Query: 170 F--FVNDRPVDLPKVSKLVNELYK-----GANSRQYPIAIMNFIVPTRACDVNVTPDKRK 222
F+N R + ++K + E Y G N PI +N + DVNV P K +
Sbjct: 249 ISIFINGRYIKNFLLNKAILEGYHTLLTIGRN----PICYINIEMDPILVDVNVHPTKLE 304
Query: 223 VFFSDECS----ILHALREGLQE-IYSPNN 247
V S E I+ +RE ++ + P+N
Sbjct: 305 VRLSKEDQLYDLIVQKIREAFKDKVLIPHN 334
>gi|448560972|ref|ZP_21634324.1| DNA mismatch repair protein MutL [Haloferax prahovense DSM 18310]
gi|445721204|gb|ELZ72872.1| DNA mismatch repair protein MutL [Haloferax prahovense DSM 18310]
Length = 745
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 93/194 (47%), Gaps = 24/194 (12%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLN--QQPLLRPLKLDLTP 674
M++IGQ +I+ + D+ L +VDQHAADE+ N+ERL + Q L P++L+LT
Sbjct: 544 MRIIGQLADTYIVAETDEGLVLVDQHAADERVNYERLKGEVEGDTPTQALAEPVELELTA 603
Query: 675 EEEVVASMHMDIIRKNGFSLEEDPHA-LAGLR-FRLKAVP--FSKKITFGVEDVKDLIST 730
E + + + + + GF HA G R ++ VP F + G+ ++D ++
Sbjct: 604 REAALFEEYREALAQVGF------HAGRTGERTVSVRTVPAVFDAALDPGL--LRDALTA 655
Query: 731 LADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLAD 790
+ + T D+V +L+ AC SI +L + +L L D
Sbjct: 656 FVREEADGG------RKTVDAVADE----LLSDLACYPSITGNTSLREGSVLDLLAALDD 705
Query: 791 LNSPWNCPHGRPTM 804
+P+ CPHGRP +
Sbjct: 706 CENPYACPHGRPVI 719
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 45/68 (66%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ +++ + RI AG+V++ +S VKEL ENSLDA AT I +A+ G E ++ D+G G
Sbjct: 4 IKQLDEKTIQRIAAGEVVERPASVVKELFENSLDADATRISVAVDAGGVEGVRIRDDGVG 63
Query: 72 ISPNNFKV 79
+S + ++
Sbjct: 64 MSEEDLEL 71
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 65/132 (49%), Gaps = 4/132 (3%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYF 170
V T+G L+ +++V+G + + PV + V G +S P + R+ D
Sbjct: 197 VFATEGRGDLQSTVLSVYGREVAESMVPVD-RDAPGVSVSGLVSHPE--TTRSTRDYLST 253
Query: 171 FVNDRPVDLPKVSKLVNELYKGA-NSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDEC 229
FVNDR V + + V + Y G ++ +YP A++ V A DVNV P K +V + DE
Sbjct: 254 FVNDRYVTDRVLREAVLDAYGGQLDADRYPFAVLFVEVAPDAVDVNVHPRKMEVRWDDEA 313
Query: 230 SILHALREGLQE 241
+ + + +++
Sbjct: 314 GVKRDVTDAVED 325
>gi|85705062|ref|ZP_01036162.1| DNA mismatch repair protein [Roseovarius sp. 217]
gi|85670384|gb|EAQ25245.1| DNA mismatch repair protein [Roseovarius sp. 217]
Length = 611
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 52/70 (74%)
Query: 10 PTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNG 69
P IR +++ V+RI AG+V++ +SAVKELVEN+LDAGAT IE+ + G+ +V+D+G
Sbjct: 13 PQIRQLDEAAVNRIAAGEVVERPASAVKELVENALDAGATRIEVGFADGGKTLIRVMDDG 72
Query: 70 CGISPNNFKV 79
CG++P+ +
Sbjct: 73 CGMAPDQLPL 82
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 80/191 (41%), Gaps = 24/191 (12%)
Query: 622 QFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTV---LNQQPLLRPLKLDLTPEEEV 678
Q + +II + + + IVDQHAA E+ +ERL + + Q LL P +DL+ +
Sbjct: 428 QVHENYIIAQTETGMVIVDQHAAHERLVYERLKRQMAESGVAAQALLIPEIVDLSEADCA 487
Query: 679 VASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGEC 738
+ L E ALAGL ++ PF + V + ++ + N G
Sbjct: 488 L--------------LMEHAEALAGLGLGIE--PFGPG-SLAVRETPAILGPV--NAGAL 528
Query: 739 --SIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWN 796
I+ + A R+ A+L+ AC S+ G + EM +L +
Sbjct: 529 LRDILDELQDQGASGTLKLRIDAILSRVACHGSVRSGRRMSAEEMNALLRKMERTPMSGQ 588
Query: 797 CPHGRPTMRHL 807
C HGRPT L
Sbjct: 589 CNHGRPTYVEL 599
>gi|402302066|ref|ZP_10821186.1| DNA mismatch repair protein, C-terminal domain protein [Selenomonas
sp. FOBRC9]
gi|400381053|gb|EJP33857.1| DNA mismatch repair protein, C-terminal domain protein [Selenomonas
sp. FOBRC9]
Length = 621
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 99/206 (48%), Gaps = 26/206 (12%)
Query: 620 IGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQ--STVLNQQPLLRPLKLDLTPEEE 677
IGQ +L +I+ + + L+I+DQHAA E+ F+R + +QQ L+ + L E
Sbjct: 435 IGQVDLTYIVAQSTRALYIIDQHAAHERILFDRFCALAEGIPSQQMLVHAI-LSFDARET 493
Query: 678 VVASMHMDIIRKNGFSLEEDPHALAGLR-FRLKAVPFSKKITFGVEDVKDLISTLADNQG 736
+ ++ + GF +E AG R +RL P ++ +D+I + + G
Sbjct: 494 QYIEENAELFSRLGFRMEP-----AGDRAYRLTESPADVP----TDEAEDVIREILVSLG 544
Query: 737 ECSIISSYKMDTADSVCPSRVR-AMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPW 795
E + P+++R A LA+ ACR++I G+ L +M+ +LE L P+
Sbjct: 545 ELH-----------AATPAQLRQAGLATMACRAAIKAGEELSFRQMEILLEELRTTPFPF 593
Query: 796 NCPHGRPTMRHLVDLTTIRKNIDENG 821
CPHGRPT+ D T + K G
Sbjct: 594 TCPHGRPTILTF-DTTDLAKMFKRTG 618
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 70/142 (49%), Gaps = 11/142 (7%)
Query: 96 RFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAIC-KSDSCKVEGFLS 154
RFV N + L T G SL+ I +++G + L P+ ++ ++ G++S
Sbjct: 188 RFVNNN-------RLTLMTAGDDSLRRAIESIYGGDAAGALIPLDFTDETGDIRITGYIS 240
Query: 155 KPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQ-YPIAIMNFIVPTRACD 213
KP R+ Q + VN R + ++K ++ +Y+ + +P+A++ VP R D
Sbjct: 241 KPSMI--RSSRAWQTYIVNGRTIQNRAIAKAIDNVYRALVPKMGFPLAVLRIEVPQRTID 298
Query: 214 VNVTPDKRKVFFSDECSILHAL 235
VNV P K ++ F DE I A+
Sbjct: 299 VNVHPQKTEMKFEDEGRIFKAV 320
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 43/61 (70%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I ++ +++I AG+V++ +S VKELVEN++DAGAT+IEI + G + +V DNG G
Sbjct: 4 IHVLDDTTINKIAAGEVVERPASVVKELVENAIDAGATAIEIEIMGGGTSFIRVTDNGRG 63
Query: 72 I 72
+
Sbjct: 64 M 64
>gi|197301743|ref|ZP_03166813.1| hypothetical protein RUMLAC_00469 [Ruminococcus lactaris ATCC
29176]
gi|197299183|gb|EDY33713.1| DNA mismatch repair domain protein [Ruminococcus lactaris ATCC
29176]
Length = 713
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 126/276 (45%), Gaps = 21/276 (7%)
Query: 532 PVPSSSLDICSTLQFSIQDLRKRRQQRLSIMQSSCHTSGSVKMRRCFAAATLELSQPENE 591
PVP ++ +T++ +RK R++ LS S S K +E +
Sbjct: 440 PVPDNAGTGRATVRDEDYFIRKMRERVLSYHNRSSSAEVSDKNGIFRQDEQMERISERVQ 499
Query: 592 ERKARALAAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFE 651
E+K + E E ++E K+IGQ + + + L+I+DQHAA E+ +E
Sbjct: 500 EQKEKPKQMDLFE-ENFLKREVRAEYKLIGQVFDTYWLVEFQDKLYIIDQHAAHERVLYE 558
Query: 652 RLSQ---STVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRL 708
R Q + Q L P+ L L+ +E + + ++D + GF +E G + +
Sbjct: 559 RTLQGMKTREFTSQYLSPPIILSLSMQEAQLLNENLDRFTRIGFEIE----PFGGEEYAV 614
Query: 709 KAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRS 768
+AVP + E + +++ LAD + + P + +AS +C++
Sbjct: 615 RAVPDNLFSIAKKELLMEMLDDLADG-------------LSTGMTPELIDEKVASMSCKA 661
Query: 769 SIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTM 804
++ + L E+ +++ L L++P++CPHGRPT+
Sbjct: 662 AVKGNNRLSAQEVDELIAELLTLDNPYHCPHGRPTI 697
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 52/75 (69%), Gaps = 2/75 (2%)
Query: 10 PTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNG 69
P I +++ + +I AG+VI+ +S VKELVEN++DAG+TS+ + +K+ G + ++ DNG
Sbjct: 2 PHIHVLDQITIDKIAAGEVIERPASIVKELVENAIDAGSTSVTVEIKDGGISFIRIRDNG 61
Query: 70 CGISPNNFKVRAVFL 84
CGI +V++ FL
Sbjct: 62 CGIPKE--EVKSAFL 74
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 64/131 (48%), Gaps = 6/131 (4%)
Query: 112 LKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSG-RNLGDRQYF 170
L+T G+ LKD I ++G ++ L + K ++ GFL KP G RN + F
Sbjct: 197 LRTSGNGKLKDVIYQIYGRDVAANLIELDYEKG-GLRITGFLGKPVITRGNRNF---ENF 252
Query: 171 FVNDRPVDLPKVSKLVNELYKG-ANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDEC 229
FVN R V +SK + + Y+ ++P A+++F + D+NV P K ++ F +
Sbjct: 253 FVNGRYVKSGMISKALEDAYRDFVMQHKFPFAVLHFHLNGEEVDINVHPTKMELRFQKQQ 312
Query: 230 SILHALREGLQ 240
+ + E +
Sbjct: 313 EVYGTVFEAVH 323
>gi|333395618|ref|ZP_08477435.1| DNA mismatch repair protein [Lactobacillus coryniformis subsp.
coryniformis KCTC 3167]
Length = 645
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 102/214 (47%), Gaps = 23/214 (10%)
Query: 612 EDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQS---TVLNQQPLLRPL 668
E F + IGQ + +++ + + +IVDQHAA E+ N+E Q +QQ LL PL
Sbjct: 441 ERFPHLDYIGQMHGTYLLAQGEDGFYIVDQHAAQERVNYEYYRQEIGKVSTDQQSLLVPL 500
Query: 669 KLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLI 728
LD + + D++++ G +LE A F +++ P K + ++++I
Sbjct: 501 VLDYPASDAIRLRDRTDLLQQLGLNLE----AFGQNSFVVRSHPTWFKAGQEEDTIREMI 556
Query: 729 STLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHL 788
+ ++Q ++ ++ TA + +C+ +I L + + +L+ L
Sbjct: 557 DYILNDQKIT--VAKFREQTAIMM------------SCKRAIKANHHLDDQQAKALLQRL 602
Query: 789 ADLNSPWNCPHGRPTMRHLV--DLTTIRKNIDEN 820
+ +P+NCPHGRP + H DL + + I E+
Sbjct: 603 PECENPFNCPHGRPVLVHFSGKDLEKMFRRIQES 636
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 62/116 (53%), Gaps = 20/116 (17%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I + + + ++I AG+VI+ +S VKELVEN+LDA +T I+I + E G + QV+DNG G
Sbjct: 4 IHELAEVLANQIAAGEVIERPASVVKELVENALDAHSTQIDIVVAEAGLKQIQVIDNGDG 63
Query: 72 ISPNN-------------------FKVRAV-FLCQAYALIAKGVRFVCTNTTGKNV 107
I+ + FKVR++ F +A IA + +TG+ V
Sbjct: 64 IAAEDVLNAFKRHATSKIHDRADLFKVRSLGFRGEALPSIASVSDMILETSTGEEV 119
>gi|448680343|ref|ZP_21690660.1| DNA mismatch repair protein MutL [Haloarcula argentinensis DSM
12282]
gi|445768787|gb|EMA19864.1| DNA mismatch repair protein MutL [Haloarcula argentinensis DSM
12282]
Length = 717
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 108/272 (39%), Gaps = 51/272 (18%)
Query: 571 SVKMRRCFAAATLELSQPENEERKAR--------------ALAAATTELERLFRK----- 611
SV +R A + + E+E R+ R A AA E ER RK
Sbjct: 441 SVDTKRASPAEAKDDAPGESEARQTRGSVSGGDSAGERTDASAAGQAETERGERKFTGGQ 500
Query: 612 -------------EDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQ--S 656
E M+++GQ +++ + D L +VDQHAADE+ N+ERL
Sbjct: 501 EQARLGDEPDATHESLPSMRILGQLADTYVVAETDDGLVLVDQHAADERVNYERLKAKFE 560
Query: 657 TVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLR-FRLKAVPFSK 715
Q L P++L+LT E V D + GF A G R ++ +P
Sbjct: 561 GETTTQALATPVELELTAREAEVFDRRSDALASLGFHT-----ARTGERSVEVRTLPGVI 615
Query: 716 KITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDA 775
G + V+D++ E + +L AC S+ +
Sbjct: 616 ADAAGPDIVRDVLGAFVAGDDEAAATVEAAA-----------DELLGDLACYPSVTGNTS 664
Query: 776 LGRNEMQKILEHLADLNSPWNCPHGRPTMRHL 807
L ++++L L + +P+ CPHGRPT+ H+
Sbjct: 665 LTEGSVRELLTALDECENPYACPHGRPTIIHI 696
Score = 53.5 bits (127), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 41/61 (67%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ ++ V RI AG+V++ +S VKELVEN++DA A +E+ ++ G + +V D+G G
Sbjct: 4 IQRLDDRTVERIAAGEVVERPASVVKELVENAIDADANRVEVVVEAGGTDGIRVTDDGVG 63
Query: 72 I 72
+
Sbjct: 64 M 64
Score = 47.0 bits (110), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 64/165 (38%), Gaps = 30/165 (18%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCK--------------VEGFLSKP 156
T G L++ +++V+G + + V + + V G +S P
Sbjct: 197 TFSTTGQGDLRETVMSVYGREVAESMISVGAGSEGNAEGDETDSFPDGPLDGVHGLVSHP 256
Query: 157 GQGSGRNLGDRQYF--FVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACD 213
N R+Y +VN R V V V + Y + +YP A++ VP D
Sbjct: 257 ET----NRAGREYLSTYVNGRYVRAGTVRDAVIDAYGTQIAPDRYPFAVLFLDVPAGDVD 312
Query: 214 VNVTPDKRKVFFSDECSILHA---------LREGLQEIYSPNNAS 249
VNV P K +V F+D+ + LREGL +P S
Sbjct: 313 VNVHPRKMEVRFADDEGVREQVRTAVEDALLREGLLRSTAPRGRS 357
>gi|357055418|ref|ZP_09116486.1| hypothetical protein HMPREF9467_03458 [Clostridium clostridioforme
2_1_49FAA]
gi|355382537|gb|EHG29634.1| hypothetical protein HMPREF9467_03458 [Clostridium clostridioforme
2_1_49FAA]
Length = 687
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 93/192 (48%), Gaps = 21/192 (10%)
Query: 616 RMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQ---QPLLRPLKLDL 672
+ K+IGQ + + + ++ LFI+DQHAA EK +E +S Q Q + P+ L L
Sbjct: 498 KHKLIGQLFDTYWMVEYNEQLFIIDQHAAHEKVLYENTVKSLKTRQYDMQMVDPPIILTL 557
Query: 673 TPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLA 732
EE++ +MD GF +E G + ++ VP + F + K+L++ +
Sbjct: 558 NMNEELLLKKYMDYFTGIGFEIE----PFGGREYAVRGVPAN---LFSIAK-KELLTEMI 609
Query: 733 DNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLN 792
D E + + P + +AS +C++++ + E +++ L DL
Sbjct: 610 DGLSEDMSVHN----------PDIIYEKVASMSCKAAVKGHHTMSFQEANVLIDQLLDLE 659
Query: 793 SPWNCPHGRPTM 804
+P+ CPHGRPT+
Sbjct: 660 NPYACPHGRPTI 671
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 69/143 (48%), Gaps = 13/143 (9%)
Query: 95 VRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLS 154
+RF+ N L T G+ +LKD I TVFG I L PV I D V GF
Sbjct: 187 IRFIQNNQNK-------LYTSGNHNLKDLIYTVFGREIAGNLLPVEI-NEDWITVTGFTG 238
Query: 155 KPGQG-SGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKG-ANSRQYPIAIMNFIVPTRAC 212
KP S RN + +F+N R + +SK + E YK +YP +++F +
Sbjct: 239 KPVIARSNRNY---ENYFINGRYIKSTIISKAIEEAYKPYMMQHKYPFTMLHFHIEPDTL 295
Query: 213 DVNVTPDKRKVFFSDECSILHAL 235
DVNV P K ++ F+D + +A+
Sbjct: 296 DVNVHPTKMELRFADGEKVYNAV 318
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 43/61 (70%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I +++ +++I AG+VI+ +S VKEL+EN++DA AT++ + +K+ G +V DNG G
Sbjct: 4 ITVLDQSTINKIAAGEVIERPASVVKELLENAIDAHATAVTVEIKDGGCSMIRVTDNGWG 63
Query: 72 I 72
I
Sbjct: 64 I 64
>gi|340027117|ref|ZP_08663180.1| DNA mismatch repair protein [Paracoccus sp. TRP]
Length = 605
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 53/77 (68%)
Query: 1 MDVETPTNSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGE 60
M+ P P IR +++ +RI AG+V++ +SAVKELVEN+LDAGAT IE+A+ + G+
Sbjct: 1 MNTHDPNMRPVIRQLDEAAANRIAAGEVVERPASAVKELVENALDAGATRIEVAIAKGGK 60
Query: 61 EWFQVVDNGCGISPNNF 77
+V D+GCG++ +
Sbjct: 61 ALIRVTDDGCGMTAEDL 77
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 87/190 (45%), Gaps = 22/190 (11%)
Query: 622 QFNLGFIIGKLDQDLFIVDQHAADEKYNFERL---SQSTVLNQQPLLRPLKLDLT-PEEE 677
Q + +II + + IVDQHAA E+ +ERL ++ + Q LL P ++L+ + +
Sbjct: 423 QLHENWIIAQTANGIVIVDQHAAHERLVYERLKAQQETNGIASQALLIPEIVELSEADAQ 482
Query: 678 VVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGE 737
+ S+ D+ + G +E G ++ VP K ++D++ LAD QG
Sbjct: 483 RILSIAGDLA-ELGLVIEP----FGGGAVAVREVPVLVKRLNVQRLIRDILDDLAD-QGT 536
Query: 738 CSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNC 797
+ + RV A+L+S AC S+ G + +EM +L + + C
Sbjct: 537 SERLRA------------RVDAVLSSMACHGSVRSGRRMTADEMNALLREMERVPKSGQC 584
Query: 798 PHGRPTMRHL 807
HGRPT L
Sbjct: 585 NHGRPTWIEL 594
>gi|430749982|ref|YP_007212890.1| DNA mismatch repair protein MutL [Thermobacillus composti KWC4]
gi|430733947|gb|AGA57892.1| DNA mismatch repair protein MutL [Thermobacillus composti KWC4]
Length = 656
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 98/201 (48%), Gaps = 22/201 (10%)
Query: 611 KEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFE----RLSQSTVLNQQPLLR 666
+ F M IGQ + +I+ + + L+++DQHAA E+ N+E + S+ L+Q LL
Sbjct: 461 RRAFPEMSWIGQLHGTYILAQSEDGLYLIDQHAAHERINYEYYLRKFSEPPKLSQT-LLV 519
Query: 667 PLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKD 726
P+ L+ T E +D G LE G F ++A P + + G E ++
Sbjct: 520 PMTLEFTSGEAEAIRSRLDAFAAAGVELE----PFGGSAFLVRAYP--EWLPQGSE--RE 571
Query: 727 LISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILE 786
+I +A E + +D + R +A + + AC++SI D + R E + ++
Sbjct: 572 IIEEMA----EWILAEKKSID----IGKLREKAAIMT-ACKASIKANDRMTREEGEALIA 622
Query: 787 HLADLNSPWNCPHGRPTMRHL 807
L+ + P+ CPHGRP + H+
Sbjct: 623 RLSACSQPYTCPHGRPIVVHI 643
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 49/67 (73%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ +++ + +RI AG+V++ +S VKEL EN++DAGAT I+IA++E G + +V DNG G
Sbjct: 4 IQVMDEQLANRIAAGEVVERPASVVKELAENAIDAGATEIDIAVEEGGLTFIRVRDNGSG 63
Query: 72 ISPNNFK 78
I ++ +
Sbjct: 64 IEADDLE 70
>gi|325091282|gb|EGC44592.1| DNA binding protein [Ajellomyces capsulatus H88]
Length = 736
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 119/254 (46%), Gaps = 37/254 (14%)
Query: 13 RPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGI 72
+ ++ V+++I AG++I A+KEL+ENS+DAGATS+EI +K+ G + Q+ DNG GI
Sbjct: 35 KALDPDVINKIAAGEIIVAPMHALKELIENSVDAGATSVEILVKDGGLKLLQITDNGHGI 94
Query: 73 SPNNFKV-----RAVF------------LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQ 115
+ R F + YA+ GV F C V T
Sbjct: 95 DVEDLFYNVPTRRRAFRSSSEEYAKILDVVGRYAVHCSGVAFSCKKHGDSGVSI---STS 151
Query: 116 GSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQ---YFFV 172
+S+ D I + G + + L ++ D ++ GF + G S N ++ F+
Sbjct: 152 TNSTTVDRIRQIHGSAVASELIDFSV---DDPRL-GFRAS-GWASNANYHAKRTTVLLFI 206
Query: 173 NDRPVDLPKVSKLVNELY-----KGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSD 227
N R V+ V + + + Y KG +P A ++ + + DVNV P KR+V F +
Sbjct: 207 NHRSVESSAVRRAIEQAYSNFLPKGG----HPFAYLDLEIEPQRVDVNVHPTKREVNFLN 262
Query: 228 ECSILHALREGLQE 241
E I+ ++ +Q+
Sbjct: 263 EDEIIGSICTTIQQ 276
>gi|302844875|ref|XP_002953977.1| hypothetical protein VOLCADRAFT_94705 [Volvox carteri f.
nagariensis]
gi|300260789|gb|EFJ45006.1| hypothetical protein VOLCADRAFT_94705 [Volvox carteri f.
nagariensis]
Length = 1001
Score = 77.0 bits (188), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 52/74 (70%)
Query: 6 PTNSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQV 65
P P IR +++ VV++I AG+VI+ +SA+KE++ENSLDAGAT I + +KE G + Q+
Sbjct: 11 PVAPPVIRKLDENVVNKIAAGEVIQRPASALKEMLENSLDAGATQISVLVKEGGNKLLQI 70
Query: 66 VDNGCGISPNNFKV 79
DNGCG+ + +
Sbjct: 71 TDNGCGVRKEDLPI 84
Score = 43.5 bits (101), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 68/166 (40%), Gaps = 18/166 (10%)
Query: 88 YALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSC 147
YA+ + GV F C + T + S D + +V+G+ + L + +
Sbjct: 193 YAVYSTGVAFSCRRQGDSRPD---ISTTATGSRVDAVRSVYGVEVARELLSLKVAVGSGT 249
Query: 148 ------------KVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANS 195
VEG +S +G+ F+N R V+ + + + LY
Sbjct: 250 GPDVPVDGPMGLSVEGLISGANYSTGKK--TVLVLFINGRCVECSPLRRALEGLYGALLP 307
Query: 196 R-QYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQ 240
+ P ++ +P R +VN+ P KR+V F + ++ A+R+ ++
Sbjct: 308 KASRPWIFLDVRLPPRQVEVNMHPTKREVGFMHQAEVIEAIRQAVE 353
>gi|292654719|ref|YP_003534616.1| DNA mismatch repair protein MutL [Haloferax volcanii DS2]
gi|448293206|ref|ZP_21483383.1| DNA mismatch repair protein MutL [Haloferax volcanii DS2]
gi|291370271|gb|ADE02498.1| DNA mismatch repair protein mutL [Haloferax volcanii DS2]
gi|445571475|gb|ELY26025.1| DNA mismatch repair protein MutL [Haloferax volcanii DS2]
Length = 735
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 91/192 (47%), Gaps = 20/192 (10%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLN--QQPLLRPLKLDLTP 674
M++IGQ + +I+ + D+ L +VDQHAADE+ N+ERL + Q L P+ L+LT
Sbjct: 534 MRIIGQLSDTYIVAETDEGLVLVDQHAADERVNYERLRGEVEGDTPTQALAEPVDLELTA 593
Query: 675 EEEVVASMHMDIIRKNGFSLEEDPHA-LAGLR-FRLKAVPFSKKITFGVEDVKDLISTLA 732
E + + + + + GF HA G R ++ VP E ++D ++
Sbjct: 594 REAALFEEYREALAQVGF------HAGRTGERTVSVRTVPAVFDAALDPELLRDALTAFV 647
Query: 733 DNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLN 792
+ + K T D+V +L+ AC SI +L + +L L D
Sbjct: 648 REE----VDGGRK--TVDAVADE----LLSDLACYPSITGNTSLREGSVLDLLAALDDCE 697
Query: 793 SPWNCPHGRPTM 804
+P+ CPHGRP +
Sbjct: 698 NPYACPHGRPVI 709
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 45/68 (66%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ +++ V RI AG+V++ +S VKEL ENSLDA AT I +A+ G E ++ D+G G
Sbjct: 4 IKQLDEKTVQRIAAGEVVERPASVVKELFENSLDADATRISVAVDAGGVEGVRIRDDGVG 63
Query: 72 ISPNNFKV 79
+S + ++
Sbjct: 64 MSEEDLEL 71
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 79/183 (43%), Gaps = 16/183 (8%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYF 170
V T+G L+ +++V+G + + PV + V G +S P + R+ D
Sbjct: 197 VFATEGRGDLQSTVLSVYGREVAESMVPVD-HDAPGVSVSGLVSHPE--TTRSTRDYLST 253
Query: 171 FVNDRPVDLPKVSKLVNELYKGA-NSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDEC 229
FVNDR V + + V + Y G ++ +YP A++ V A DVNV P K +V + DE
Sbjct: 254 FVNDRYVTDRVLREAVLDAYGGQLDADRYPFAVLFVEVAPDAVDVNVHPRKMEVRWDDEA 313
Query: 230 SILHALRE---------GLQEIYSPNNASYSVNKVEQLIEPEKSGPSSGAESCMFLEQLS 280
+ + E GL +P S E IEP SG + + +
Sbjct: 314 GVKREVTEAVEDALLSHGLVRSSAPRGRS---KADEAAIEPGSSGDDATQLDPHEVRESE 370
Query: 281 PDG 283
PDG
Sbjct: 371 PDG 373
>gi|335881969|gb|AEH59228.1| MLH3, partial [Oidiodendron maius]
Length = 283
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 98/225 (43%), Gaps = 45/225 (20%)
Query: 636 LFIVDQHAADEKYNFERLSQSTVLNQQP------------LLRPLKLDLTPEEEVVASMH 683
L ++DQHAADE+ ERL Q QQP L +PL ++ +E + H
Sbjct: 64 LVVIDQHAADERIRIERLMQELCSPQQPNISGDSGVQGIHLEKPLSYIVSKKEINLLQNH 123
Query: 684 MDIIRKNGFSLE----------EDPHALAGLRFRLKAVPFSKKITFGVEDVKDLI----- 728
+ G S + ED H + + S++ + + DLI
Sbjct: 124 RNHFSDWGISYDISAKVTTTNGED-HGSQTVIIKCLPPVISERCKANPKLLIDLIRTEIW 182
Query: 729 -----------STLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALG 777
+T+ D Q S ++ + CP + ML SRACRS+IM D L
Sbjct: 183 RLHDHGDTPRAATMLDAQENHSWVAKIRS------CPQGIIDMLNSRACRSAIMFNDELS 236
Query: 778 RNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKNIDENGA 822
+ + Q+++ LA+ P+ C HGRP++ LVDL T+R D + +
Sbjct: 237 KEQCQRLISRLAECAFPFQCAHGRPSIVPLVDLGTLRVFTDSDSS 281
>gi|83951218|ref|ZP_00959951.1| DNA mismatch repair protein [Roseovarius nubinhibens ISM]
gi|83839117|gb|EAP78413.1| DNA mismatch repair protein [Roseovarius nubinhibens ISM]
Length = 636
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 51/70 (72%)
Query: 10 PTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNG 69
P IR ++ ++RI AG+V++ +SAVKELVEN+LD+GAT IEI+ + G+ +V DNG
Sbjct: 13 PVIRQLDDAAINRIAAGEVVERPASAVKELVENALDSGATRIEISQAQGGKSLIRVTDNG 72
Query: 70 CGISPNNFKV 79
CG++P + +
Sbjct: 73 CGMTPQDLPL 82
Score = 51.2 bits (121), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 76/188 (40%), Gaps = 26/188 (13%)
Query: 622 QFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTV---LNQQPLLRPLKLDLTPEEEV 678
Q + +II + + L IVDQHAA E+ +E+L + Q LL P ++L+ +
Sbjct: 453 QIHENYIIAQTEDGLVIVDQHAAHERLVYEKLKTQQAERGVAAQALLIPEIVELSDGDRG 512
Query: 679 VASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD---NQ 735
+ + G +EE G ++ VP G D + L+ + D +Q
Sbjct: 513 ALLDAAEDLAALGLVIEE----FGGSAVAVREVP----AILGAVDARALLLDVLDELSDQ 564
Query: 736 GECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPW 795
G I R+ A+L+ AC SI G + EM +L +
Sbjct: 565 GSSMTIRG------------RIDAILSRVACHGSIRSGRRMRAEEMNALLREMEATPHSG 612
Query: 796 NCPHGRPT 803
C HGRPT
Sbjct: 613 QCNHGRPT 620
>gi|429192644|ref|YP_007178322.1| DNA mismatch repair protein MutL [Natronobacterium gregoryi SP2]
gi|448326552|ref|ZP_21515904.1| DNA mismatch repair protein MutL [Natronobacterium gregoryi SP2]
gi|429136862|gb|AFZ73873.1| DNA mismatch repair protein MutL [Natronobacterium gregoryi SP2]
gi|445611277|gb|ELY65033.1| DNA mismatch repair protein MutL [Natronobacterium gregoryi SP2]
Length = 719
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 109/230 (47%), Gaps = 24/230 (10%)
Query: 584 ELSQPENE-ERKARALAAATT-ELERLFRKE-DFGRM---KVIGQFNLGFIIGKLDQDLF 637
E SQPE + ERK T E +R +E DF + +V+GQF +I+ + L
Sbjct: 484 EPSQPERDPERKFDGPTEQRTLEGDRATGEETDFDSLPPLRVLGQFGDTYIVCETPDGLA 543
Query: 638 IVDQHAADEKYNFERLSQSTVLN--QQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLE 695
++DQHAADE+ N+ERL ++ + Q L P++L+LT E + + + + + GF
Sbjct: 544 LIDQHAADERVNYERLQEAFASDPPAQALAEPVELELTAAEAEAFAGYSEALERLGFYAN 603
Query: 696 E-DPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCP 754
D +A + VP + T E ++D++++ + E +T D++
Sbjct: 604 RVDDRTVA-----VTTVPAVLEETLEPEHLRDVLTSFVEGDREAG------AETVDALA- 651
Query: 755 SRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTM 804
L AC S+ +L + +L L D +P+ CPHGRP +
Sbjct: 652 ---DEFLGDLACYPSVTGNTSLTEGSVVDLLAALDDCENPYACPHGRPVI 698
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 50/68 (73%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I +++ V RI AG+V++ +SAVKELVENSLDA A+ +E+A++E G E +V D+G G
Sbjct: 6 IHELDEDTVARIAAGEVVERPASAVKELVENSLDADASRLEVAVEEGGTESIRVADDGHG 65
Query: 72 ISPNNFKV 79
++ ++ +V
Sbjct: 66 MTESDLRV 73
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 61/133 (45%), Gaps = 20/133 (15%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSD-----SCKVEGFLSKPGQGSGRNLG 165
V T G L+ +++V+G + + PV + + D + G +S P N
Sbjct: 200 VFSTTGQGDLQAAVLSVYGREVAAAMIPVEVDEEDLPPGPVDSISGLVSHPET----NRS 255
Query: 166 DRQYF--FVNDRPVDLPKVSKLVNELYKGA-----NSRQYPIAIMNFIVPTRACDVNVTP 218
R+Y +VNDR V S + E GA S +YP A + VP A DVNV P
Sbjct: 256 SREYLATYVNDRAV----TSDAIREGIMGAYGTQLGSDRYPFATLFLEVPGEAVDVNVHP 311
Query: 219 DKRKVFFSDECSI 231
KR+V F D+ ++
Sbjct: 312 RKREVRFDDDDAV 324
>gi|448472568|ref|ZP_21601192.1| DNA mismatch repair protein MutL [Halorubrum aidingense JCM 13560]
gi|445819872|gb|EMA69706.1| DNA mismatch repair protein MutL [Halorubrum aidingense JCM 13560]
Length = 767
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 104/228 (45%), Gaps = 33/228 (14%)
Query: 600 AATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQS--T 657
A+TT ER + + ++V+GQ + ++I + L ++DQHAADE+ N+ERL +
Sbjct: 553 ASTTAAERSY--DSLPPLRVLGQLHETYVIAEAPDGLVLIDQHAADERVNYERLQAAFDD 610
Query: 658 VLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLR---FRLKAVPFS 714
+ Q L P++++LT E V +D + GF +E AG R F
Sbjct: 611 GADAQALAEPVRVELTAREAAVFDEFVDDLAAIGFQVER-----AGDRAVVVEAVPAVFD 665
Query: 715 KKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGD 774
+ + V+D++S L G+ + D D +LA AC S+
Sbjct: 666 AALDPAL--VRDVLSALV---GDATAGDEPVTDIVDE--------LLADLACYPSVTGNT 712
Query: 775 ALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKNIDENGA 822
+L + +L+ L +P+ CPHGRP + IR + DE G+
Sbjct: 713 SLTEGRVVDLLDRLDACENPYACPHGRPVV--------IRLDRDEIGS 752
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 46/70 (65%)
Query: 10 PTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNG 69
P I +++ V RI AG+V++ +S VKEL+ENSLDAGA+ + ++++ G E +V D+G
Sbjct: 4 PDIERLDERTVQRIAAGEVVERPASVVKELIENSLDAGASRVAVSVEAGGTEGIRVRDDG 63
Query: 70 CGISPNNFKV 79
GI + +
Sbjct: 64 VGIPADQLEA 73
Score = 43.9 bits (102), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 62/148 (41%), Gaps = 23/148 (15%)
Query: 112 LKTQGSSSLKDNIITVFGMNIYNCLEPVAICKS--DSC--------------KVEGFLSK 155
T+G+ L+ ++ V+G + + VA D+ V G +S
Sbjct: 200 FATEGNGDLRSAVLAVYGREVAESMVDVAWTPDAPDASGTPDGDTHADPPVRSVTGLVSH 259
Query: 156 PGQGSGRNLGDRQYF--FVNDRPVDLPKVSKLVNELYKGA-NSRQYPIAIMNFIVPTRAC 212
P R+Y +VNDR V + + + Y G +YP A++ VP
Sbjct: 260 PET----TRSTREYLATYVNDRYVTASALREATLDAYGGQLAPDRYPFAVLFVEVPAGDV 315
Query: 213 DVNVTPDKRKVFFSDECSILHALREGLQ 240
DVNV P K +V F +E ++ A+ + ++
Sbjct: 316 DVNVHPRKLEVRFDEEPAVRAAVEDAVE 343
>gi|448306716|ref|ZP_21496619.1| DNA mismatch repair protein MutL [Natronorubrum bangense JCM 10635]
gi|445597227|gb|ELY51303.1| DNA mismatch repair protein MutL [Natronorubrum bangense JCM 10635]
Length = 730
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 92/191 (48%), Gaps = 18/191 (9%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLN--QQPLLRPLKLDLTP 674
++V+GQ+ +++ + L ++DQHAADE+ N+ERL Q+ + Q L P+ L+LT
Sbjct: 534 LRVLGQYTDTYLVCETADGLVLIDQHAADERVNYERLQQAFADDPAAQALASPVDLELTA 593
Query: 675 EEEVVASMHMDIIRKNGFSLEE-DPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
E + + + + GF + D +A + VP + T E ++D++++ +
Sbjct: 594 VEAEAFESYREALSRLGFYADRVDDRTVA-----VTTVPAVLEETLEPEQLRDVLASFVE 648
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNS 793
E +T D++ L AC SI +L + +LE L +
Sbjct: 649 GDRETG------AETVDALADE----FLGDLACYPSITGNTSLTEGSVVDLLEALDGCEN 698
Query: 794 PWNCPHGRPTM 804
P++CPHGRP +
Sbjct: 699 PYSCPHGRPVL 709
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 47/68 (69%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I ++ V RI AG+V++ +SAVKELVENSLDA A+S+++ ++E G E +V D+G G
Sbjct: 11 IHQLDDDTVARIAAGEVVERPASAVKELVENSLDADASSVDVTVEEGGTELIRVADDGAG 70
Query: 72 ISPNNFKV 79
+S + +
Sbjct: 71 MSEADLRA 78
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 58/134 (43%), Gaps = 24/134 (17%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSC------KVEGFLSKPGQGSGRNL 164
V T G L+ +++V+G + + + PV +D V G +S P N
Sbjct: 205 VFATTGQGDLQAAVLSVYGREVASAMIPV---DADELPPGPLESVSGLVSHPET----NR 257
Query: 165 GDRQYF--FVNDRPVDLPKVSKLVNELYKGANSRQ-----YPIAIMNFIVPTRACDVNVT 217
R+Y +VN R V + V E GA Q YP + VP A DVNV
Sbjct: 258 SSREYLATYVNGRAV----TADAVREGIMGAYGTQLGGDRYPFVTLFLEVPGDAVDVNVH 313
Query: 218 PDKRKVFFSDECSI 231
P KR+V F D+ ++
Sbjct: 314 PRKREVRFDDDDAV 327
>gi|218290140|ref|ZP_03494302.1| DNA mismatch repair protein MutL [Alicyclobacillus acidocaldarius
LAA1]
gi|218239849|gb|EED07038.1| DNA mismatch repair protein MutL [Alicyclobacillus acidocaldarius
LAA1]
Length = 628
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 99/204 (48%), Gaps = 38/204 (18%)
Query: 610 RKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERL---SQSTVLNQQPLLR 666
R D+ R++ IGQ +I+ + DL+I+DQHAA E+ +E L Q + PLL
Sbjct: 434 RPADW-RLRPIGQALRMYILAEDGNDLYIIDQHAAHERVLYEDLLDAWQQGEIQPMPLLT 492
Query: 667 PLKLDLTPE--EEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDV 724
PL+L LTP EEV+A + + GF + DP FG +
Sbjct: 493 PLELSLTPSAFEEVMA--RREELLALGFEI--DP--------------------FGAHTI 528
Query: 725 KDLISTLADN-QG-ECSIISSYKMDTADSVCPSR----VRAMLASRACRSSIMIGDALGR 778
L+ T+ D+ QG + + + +D S+ P + LA+RAC+++I D+L
Sbjct: 529 --LVRTIPDSWQGLDYAALLRDVLDDLASMGPKATARDIMHRLATRACKAAIKAHDSLTM 586
Query: 779 NEMQKILEHLADLNSPWNCPHGRP 802
EM+ + L P++CPHGRP
Sbjct: 587 PEMEALCRRLTRARDPYHCPHGRP 610
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 45/65 (69%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ + K + +I +G+V+ +S VKELVENSLDAGAT IE++L E G VVD+G G
Sbjct: 4 IQVMPKVMADQIASGEVVARPASCVKELVENSLDAGATRIEVSLAEGGIACVTVVDDGEG 63
Query: 72 ISPNN 76
+SP +
Sbjct: 64 MSPED 68
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 75/171 (43%), Gaps = 15/171 (8%)
Query: 78 KVRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLE 137
+ R+V + Q +L V FVC + + V+ +T G ++ ++G+ L
Sbjct: 168 QARSVEVVQRESLAHPEVAFVC-----RTERQVLFQTPGRGDAREVWAALYGVGEARMLL 222
Query: 138 PVAICKSDSCKVEGFLSKPGQG-SGRNLGDRQYFFVNDRPVDLPKVSKLVNELY-KGANS 195
V D + G++ +P Q S R G Y F+N RPV P V + V Y +
Sbjct: 223 EVHGATGDYA-LRGYVGRPTQARSSRQHG---YLFINGRPVRNPAVQQAVERAYGERLMV 278
Query: 196 RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDE---CSILH-ALREGLQEI 242
+YP+ + + D NV P K +V S+E C ++ A+R L +
Sbjct: 279 GRYPVYALYLEMDPALVDPNVHPQKWEVRLSEERDVCDLVESAVRAALDNV 329
>gi|448718174|ref|ZP_21702990.1| DNA mismatch repair protein mutL [Halobiforma nitratireducens JCM
10879]
gi|445784562|gb|EMA35371.1| DNA mismatch repair protein mutL [Halobiforma nitratireducens JCM
10879]
Length = 784
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 91/190 (47%), Gaps = 16/190 (8%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLN--QQPLLRPLKLDLTP 674
++V+GQ + +++ + L ++DQHAADE+ N+ERL + + Q L P++L+LT
Sbjct: 588 LRVMGQLDDTYLVCETPDGLALIDQHAADERVNYERLRDAFADDPPAQALADPVELELTA 647
Query: 675 EEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADN 734
E + + D + + GF + + G + VP + T E ++D++++ +
Sbjct: 648 AEAEAFAGYADALERLGFYADR----IDGRTVAVTTVPAVLEETLEPEHLRDVLTSFVEG 703
Query: 735 QGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSP 794
E +T D + L AC S+ +L + +L L D +P
Sbjct: 704 DREAG------AETVDELADE----FLGDLACYPSVTGNTSLTEGSVVDLLATLDDCENP 753
Query: 795 WNCPHGRPTM 804
++CPHGRP +
Sbjct: 754 YSCPHGRPVV 763
Score = 62.8 bits (151), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 47/68 (69%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I +++ V RI AG+V++ +SAVKELVENSLDA A+ +++ ++E G E +V D+G G
Sbjct: 27 IHRLDEDTVARIAAGEVVERPASAVKELVENSLDADASRVDVTVEEGGTELIRVADDGSG 86
Query: 72 ISPNNFKV 79
++ + +
Sbjct: 87 MTEADLRA 94
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 74/175 (42%), Gaps = 25/175 (14%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSD-----SCKVEGFLSKPGQGSGRNLG 165
V T G L+ +++V+G + + + PV D + G +S P N
Sbjct: 221 VFATTGQGDLQAAVLSVYGREVASAMIPVGADGDDLPPGPVDAISGLVSHPET----NRS 276
Query: 166 DRQYF--FVNDRPVDLPKVSKLVNELYKGA-NSRQYPIAIMNFIVPTRACDVNVTPDKRK 222
R+Y +VNDR V + + + Y S +YP + VP A DVNV P KR+
Sbjct: 277 SREYLATYVNDRAVTADAIREGIMGAYGTQLGSDRYPFVTLFLEVPGDAVDVNVHPRKRE 336
Query: 223 VFFSDECSILHA---------LREGLQEIYSPNNASYSVNKVEQLIEPEKSGPSS 268
V F D+ ++ L GL +P S E +EP+++ PSS
Sbjct: 337 VRFDDDDAVRRQVDAAVESALLEHGLLRSRAPRGRSA---PGEARVEPDRT-PSS 387
>gi|342213674|ref|ZP_08706396.1| DNA mismatch repair protein [Veillonella sp. oral taxon 780 str.
F0422]
gi|341597699|gb|EGS40241.1| DNA mismatch repair protein [Veillonella sp. oral taxon 780 str.
F0422]
Length = 672
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 94/188 (50%), Gaps = 23/188 (12%)
Query: 620 IGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQST-VLNQQPLLRPLKLDLTPEEEV 678
+GQ +I+ K DL+I+DQHAA E+ +++L +S+ + Q LL P+ +D++ EE
Sbjct: 490 MGQVASCYILAKKGDDLYIIDQHAAHERVRYDKLCKSSESIPMQELLMPMYMDVSEEELT 549
Query: 679 VASMHMDIIRKNGFSLEED-PHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGE 737
+A D + GF +++ P +L R+ P + E ++ + S + D+Q
Sbjct: 550 LAEEQRDALLDLGFQVDQGGPTSL-----RIDGHPVDIIESKVPEILQYVFSYMHDHQ-- 602
Query: 738 CSIISSYKMDTADSVCPSRVR-AMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWN 796
S +++R MLA +CR +I G L ++ +L+ L P+
Sbjct: 603 -------------SPSAAQLRHEMLAYASCRGAIKAGHNLNLVQIDALLQDLFSTEKPYV 649
Query: 797 CPHGRPTM 804
CPHGRPT+
Sbjct: 650 CPHGRPTI 657
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 50/64 (78%)
Query: 10 PTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNG 69
PTI +++ +++I AG+V++ +S +KELVEN++DAGATSIE+ + E G E+ ++ DNG
Sbjct: 2 PTIHVLDETTINQIAAGEVVERPASVIKELVENAIDAGATSIEVEIAEGGIEYMRITDNG 61
Query: 70 CGIS 73
CG+S
Sbjct: 62 CGMS 65
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 67/141 (47%), Gaps = 7/141 (4%)
Query: 110 VVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPG-QGSGRNLGDRQ 168
V + T G+ + D I ++G + + P+A +++ VEG +SKP S R Q
Sbjct: 195 VTIMTPGNHKMVDTIAALYGFKVSEDVFPIAY-EAEGIYVEGVVSKPTVLKSSRQW---Q 250
Query: 169 YFFVNDRPVDLPKVSKLVNELYKGANSRQ-YPIAIMNFIVPTRACDVNVTPDKRKVFFSD 227
VN R + + K ++ Y + YP+ ++ +VP D+NV P K +V FSD
Sbjct: 251 TTIVNQRVISDKAIYKAIDTAYHALLPKGGYPLVVLQIVVPPGTVDINVHPRKSEVKFSD 310
Query: 228 ECSILHALREG-LQEIYSPNN 247
+ + A+ LQ + P +
Sbjct: 311 DKPVFKAVYNSILQALEHPTH 331
>gi|225572116|ref|ZP_03780980.1| hypothetical protein RUMHYD_00410 [Blautia hydrogenotrophica DSM
10507]
gi|225040450|gb|EEG50696.1| DNA mismatch repair domain protein [Blautia hydrogenotrophica DSM
10507]
Length = 677
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 98/202 (48%), Gaps = 22/202 (10%)
Query: 606 ERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERL---SQSTVLNQQ 662
ER+ ++ R ++IGQ + + + + +I+DQHAA EK +E++ Q + Q
Sbjct: 479 ERMLSQKARSRHRLIGQVFDTYWLVEYEDKFYIIDQHAAHEKVLYEKIVRQYQEREMISQ 538
Query: 663 PLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVE 722
+ P+ + LT ++E + HM + K GF +E G + + AVP
Sbjct: 539 YISPPVVVSLTMQQETLLLEHMQMFLKFGFEIE----PFGGKEYSIHAVP---------- 584
Query: 723 DVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQ 782
DL + Q +I + + D S+ R +A+ AC++++ L E
Sbjct: 585 --ADLYG-YTEGQLFVEMIDALEQDGQLSMEVFAGR--MATMACKAAVKGNTQLSFAEAN 639
Query: 783 KILEHLADLNSPWNCPHGRPTM 804
++++ L L++P++CPHGRPT+
Sbjct: 640 ELIDQLLTLDNPYHCPHGRPTI 661
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 51/82 (62%), Gaps = 2/82 (2%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I ++K + +I AG+V++ SS VKEL EN++DAGAT++ + +K+ G+ ++ DNG G
Sbjct: 4 IAVLDKNTIDKIAAGEVVERPSSVVKELTENAIDAGATAVTVEIKDGGKTLIRITDNGAG 63
Query: 72 ISPNNFKVRAVFLCQAYALIAK 93
I +V F+ A + I K
Sbjct: 64 IEKE--QVPMAFVRHATSKIEK 83
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 64/132 (48%), Gaps = 6/132 (4%)
Query: 110 VVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSG-RNLGDRQ 168
V L T G+ S +D I ++G +I + V +++ +EG++ KP G RN +
Sbjct: 195 VKLHTSGNFSRRDVIYQIYGRDITKEILEVH-YENEFLSLEGYIGKPSVSRGNRNFEN-- 251
Query: 169 YFFVNDRPVDLPKVSKLVNELYKG-ANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSD 227
+++N R V +SK + + YKG +P A + + DVNV P K +V FS
Sbjct: 252 -YYINGRYVKNKIISKAIEDAYKGFLMQHNFPFASLQIEMTGNDLDVNVHPAKMEVRFSR 310
Query: 228 ECSILHALREGL 239
+ A+ E +
Sbjct: 311 GDEVYKAIYEAI 322
>gi|442804337|ref|YP_007372486.1| DNA mismatch repair protein MutL [Clostridium stercorarium subsp.
stercorarium DSM 8532]
gi|442740187|gb|AGC67876.1| DNA mismatch repair protein MutL [Clostridium stercorarium subsp.
stercorarium DSM 8532]
Length = 656
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 90/191 (47%), Gaps = 23/191 (12%)
Query: 618 KVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQ---QPLLRPLKLDLTP 674
++IGQ +II + +D+F++DQHAA E+ FE L + V + Q LL P+ ++LT
Sbjct: 469 RIIGQAFDSYIILEEGEDVFVIDQHAAHERIRFETLREWFVHEEAFSQGLLSPVMVELTQ 528
Query: 675 EEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLA-D 733
+E + IRK GF E ++A+P+ F D +D++ L+ +
Sbjct: 529 QEMHEFTELEPYIRKLGFEAE----VFGNRTVLVRAIPYLLTEGFSDRDFRDILGKLSEE 584
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNS 793
+G II P M+ AC+S+I + E+Q ++ L +
Sbjct: 585 TRGVLEII------------PEETIYMM---ACKSAIKANRPMSEMEIQSLVRELVKCEN 629
Query: 794 PWNCPHGRPTM 804
P+ C HGRP +
Sbjct: 630 PYTCVHGRPVI 640
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 62/132 (46%), Gaps = 6/132 (4%)
Query: 106 NVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSG-RNL 164
N V+ T G+ L + ++FG + + PV + + KV GF+ KP G RNL
Sbjct: 191 NQGKTVIHTPGNHDLLSTVYSLFGKDTARAVIPVNLT-FNGVKVSGFVGKPEISRGNRNL 249
Query: 165 GDRQYFFVNDRPVDLPKVSKLVNELYKG-ANSRQYPIAIMNFIVPTRACDVNVTPDKRKV 223
+ FVN R V + + E YK +++P ++ VP DVNV P K +V
Sbjct: 250 ---EMVFVNGRVVYNRTIITAIEEAYKTRLMQKRFPFTVLKVDVPPETVDVNVHPAKLEV 306
Query: 224 FFSDECSILHAL 235
FSDE + +
Sbjct: 307 RFSDENMVYRTV 318
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 45/65 (69%)
Query: 15 INKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISP 74
+++ ++I AG+VI+ +S VKE+VEN++DA ATSI + + G + ++VDNG GI
Sbjct: 7 LDENTANQIAAGEVIERPASVVKEMVENAIDAHATSITVEITNGGVKSIKIVDNGDGIEG 66
Query: 75 NNFKV 79
++ ++
Sbjct: 67 DDVEL 71
>gi|282882043|ref|ZP_06290684.1| DNA mismatch repair protein MutL [Peptoniphilus lacrimalis 315-B]
gi|281298073|gb|EFA90528.1| DNA mismatch repair protein MutL [Peptoniphilus lacrimalis 315-B]
Length = 629
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 101/205 (49%), Gaps = 29/205 (14%)
Query: 618 KVIG-QFNLGFIIGKLDQDL-FIVDQHAADEKYNFERLSQSTV---LNQQPLLRPLKLDL 672
+++G F+ I+ D+DL ++VDQHAA E+ +E+ + + +N Q LL+P ++L
Sbjct: 442 RIVGILFDTFIILENKDKDLIYLVDQHAAHERVMYEKYKKQYLNSNINSQVLLKPEIIEL 501
Query: 673 TPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLA 732
E + + + + GFS++ + L+ VP V ++D+I +L
Sbjct: 502 NASEYMKIEKNFKLFKDLGFSID----SFGENSIILREVPMIFGFPTYVSFIRDIIDSLD 557
Query: 733 DNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLN 792
D I S+Y+ D + RAC ++ GD L E+++++ L
Sbjct: 558 D-----KIYSNYQADMWK----------VMKRACLKAVKAGDTLSNMEVKELINSLIHCE 602
Query: 793 SPWNCPHGRPTMRHLVDL--TTIRK 815
+P+ CPHGRPT ++D+ TTI K
Sbjct: 603 NPYTCPHGRPT---IIDIKKTTIAK 624
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 43/62 (69%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
+I ++ + +I AG++I++ +S VKEL+ENS+DAGA +I + +K ++ ++ D+GC
Sbjct: 2 SIVLLDDNTISKISAGEIIENPASVVKELLENSIDAGAKNITVEVKNSPTDFIRITDDGC 61
Query: 71 GI 72
G
Sbjct: 62 GF 63
Score = 48.9 bits (115), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 72/137 (52%), Gaps = 4/137 (2%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYF 170
+L + +S+ K++I+ V G I L + S++ K+ + S R+ + QY
Sbjct: 195 LLNSYKNSNYKNHILNVLGREIATNLIENSFS-SENYKIRAYFS--NNKLFRSSRNHQYI 251
Query: 171 FVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDEC 229
++N R V ++S+ + ++YK ++P+ I+ + + DVN+ P K +V S+E
Sbjct: 252 YINGRYVTNREISREIEKVYKSLIPLNRFPVFILFIDINSSLIDVNIHPKKHEVKLSNEN 311
Query: 230 SILHALREGLQEIYSPN 246
+++ L E ++E+ PN
Sbjct: 312 NLIAILCEMVEEVLYPN 328
>gi|386001034|ref|YP_005919333.1| DNA mismatch repair protein MutL [Methanosaeta harundinacea 6Ac]
gi|357209090|gb|AET63710.1| DNA mismatch repair protein MutL [Methanosaeta harundinacea 6Ac]
Length = 595
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 93/192 (48%), Gaps = 21/192 (10%)
Query: 615 GRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQ---STVLNQQPLLRPLKLD 671
G ++++GQ +I+ + + L +VDQHAA E+ +E LS+ S ++Q+ L+ P+ L+
Sbjct: 406 GGLRLLGQALQLYIVAEGPEGLVLVDQHAAAERIRYEILSKKYASGTISQE-LIEPVTLE 464
Query: 672 LTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTL 731
L+P+E V+ + + GF D + +++VP + E V D++ L
Sbjct: 465 LSPKEAVLLEEWGPTLAEMGF----DVQPFGKNAYTVRSVPAIGRRLDSPEAVHDVLRDL 520
Query: 732 ADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADL 791
G S+ K + +L ACR SI G +G EM +L L+
Sbjct: 521 F-ALGRVGTGSTAKEE------------ILKLLACRGSIKAGAEMGWKEMHDLLRDLSTC 567
Query: 792 NSPWNCPHGRPT 803
SP CPHGRPT
Sbjct: 568 ESPRTCPHGRPT 579
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 46/61 (75%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ +++ +++I AG+VI+ +S VKELVENS+DAGAT I + ++E G+ +V D+GCG
Sbjct: 4 IKLLDQDAINKIAAGEVIERPASVVKELVENSIDAGATRILVEVEEGGKGLIRVTDDGCG 63
Query: 72 I 72
+
Sbjct: 64 M 64
>gi|320529999|ref|ZP_08031075.1| DNA mismatch repair protein [Selenomonas artemidis F0399]
gi|320137796|gb|EFW29702.1| DNA mismatch repair protein [Selenomonas artemidis F0399]
Length = 621
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 98/206 (47%), Gaps = 26/206 (12%)
Query: 620 IGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQ--STVLNQQPLLRPLKLDLTPEEE 677
IGQ +L +I+ + + L+I+DQHAA E+ F+R + +QQ L+ + L E
Sbjct: 435 IGQVDLTYIVAQSTRALYIIDQHAAHERILFDRFCALAEGIPSQQMLVHAI-LSFDARET 493
Query: 678 VVASMHMDIIRKNGFSLEEDPHALAGLR-FRLKAVPFSKKITFGVEDVKDLISTLADNQG 736
+ ++ + GF +E AG R +RL P ++ +D+I + + G
Sbjct: 494 QYIEENAELFSRLGFRMEP-----AGDREYRLTESPADVP----TDEAEDVIREILVSLG 544
Query: 737 ECSIISSYKMDTADSVCPSRVR-AMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPW 795
E + P+ +R A LA+ ACR++I G+ L +M+ +LE L P+
Sbjct: 545 ELH-----------AATPAELRQAGLATMACRAAIKAGEELSFRQMEILLEELRTTPFPF 593
Query: 796 NCPHGRPTMRHLVDLTTIRKNIDENG 821
CPHGRPT+ D T + K G
Sbjct: 594 TCPHGRPTILTF-DTTDLAKMFKRTG 618
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 73/147 (49%), Gaps = 11/147 (7%)
Query: 96 RFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAIC-KSDSCKVEGFLS 154
RFV N + L T G SL+ I +++G + L P+ ++ ++ G++S
Sbjct: 188 RFVNNN-------RLTLMTAGDDSLRRAIESIYGGDAAGALIPLDFTDEAGDIRITGYIS 240
Query: 155 KPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQ-YPIAIMNFIVPTRACD 213
KP R+ Q + VN R + ++K ++ +Y+ + +P+A++ VP R D
Sbjct: 241 KPSMI--RSSRAWQTYIVNGRTIQNRAIAKAIDNVYRALVPKMGFPLAVLRIEVPQRTID 298
Query: 214 VNVTPDKRKVFFSDECSILHALREGLQ 240
VNV P K ++ F DE I A+ + +Q
Sbjct: 299 VNVHPQKTEMKFEDEGRIFKAVYKTVQ 325
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 43/61 (70%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I ++ +++I AG+V++ +S VKELVEN++DAGAT+IEI + G + +V DNG G
Sbjct: 4 IHVLDDTTINKIAAGEVVERPASVVKELVENAIDAGATAIEIEIMGGGTSFIRVTDNGRG 63
Query: 72 I 72
+
Sbjct: 64 M 64
>gi|374854606|dbj|BAL57483.1| DNA mismatch repair protein MutL [uncultured Chloroflexi bacterium]
Length = 579
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 108/245 (44%), Gaps = 38/245 (15%)
Query: 584 ELSQPENEERKARALAAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHA 643
+L P+ E +RAL A + +++IGQ +++ + L+++DQHA
Sbjct: 366 QLPHPQPAEPLSRALPAFS----------GLPLLRLIGQLANTYLLAEGPDGLYLIDQHA 415
Query: 644 ADEKYNFERLS---QSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFS-LEEDPH 699
A E+ FE+ + LN Q LL P+ + P + + + + GF + PH
Sbjct: 416 AHERILFEKFLNELREKRLNSQALLSPVVVTFPPHQATLLESQLPSLEHFGFEVIAFGPH 475
Query: 700 ALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRA 759
F+++A+P L +T +++ ++ D ++ A
Sbjct: 476 T-----FQIRAIP-------------ALFATADPTAALRALVEDFEED--ETPLQQEQEA 515
Query: 760 MLASRAC-RSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHL-VDLTTIRKNI 817
LA+R C R +I G L E + ++E L SP CPHGRPTM HL VDL + +
Sbjct: 516 RLAARICKRLAIKAGQDLSPAEQRALVEELERCQSPRTCPHGRPTMIHLSVDL--LERQF 573
Query: 818 DENGA 822
GA
Sbjct: 574 GRKGA 578
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 43/68 (63%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR + V +I AG+VI+ S VKEL+EN+LDAGA +++ L + G +VVD+GCG
Sbjct: 3 IRVLPPEVASQIAAGEVIERPVSVVKELIENALDAGAHQVQVRLLQAGRRLIEVVDDGCG 62
Query: 72 ISPNNFKV 79
I P +
Sbjct: 63 IPPEELSL 70
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 71/147 (48%), Gaps = 13/147 (8%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICK 143
L YAL VRF T K ++++L+T G + + ++G+ + L V +
Sbjct: 173 LLSRYALAYPQVRF-----TLKEGENLLLQTAGDGDRRAILAALYGVEVARPLIEVQ-EE 226
Query: 144 SDSCKVEGFLSKPG--QGSGRNLGDRQYFFVNDRPV-DLPKVSKLVNELYKGANSRQYPI 200
++ GF+S PG + + R + FFVN R V D+P + L+ + +YP+
Sbjct: 227 EGGLRLSGFISPPGITRSNRREIA----FFVNGRWVQDVPLATALLQAYHTLLMVGRYPL 282
Query: 201 AIMNFIVPTRACDVNVTPDKRKVFFSD 227
A + VP + DVNV P K +V F +
Sbjct: 283 AFLFLEVPPQDVDVNVHPAKAEVRFRE 309
>gi|297569308|ref|YP_003690652.1| DNA mismatch repair protein MutL [Desulfurivibrio alkaliphilus
AHT2]
gi|296925223|gb|ADH86033.1| DNA mismatch repair protein MutL [Desulfurivibrio alkaliphilus
AHT2]
Length = 642
Score = 76.6 bits (187), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 87/194 (44%), Gaps = 21/194 (10%)
Query: 618 KVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERL---SQSTVLNQQPLLRPLKLDLTP 674
+++GQ +II + +DQHAA E+ +ERL L +Q LL P L+ +P
Sbjct: 455 QLLGQVLHSYIICATADGMLAIDQHAAHERLLYERLLAQYNERGLARQALLFPAVLECSP 514
Query: 675 EEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADN 734
E V I + G +E G + +KAVP L+++ +
Sbjct: 515 AEAAVLEARGGEIARLGLGIE----TFGGHSYLIKAVP-------------ALLASHSPT 557
Query: 735 QGECSIISSYKMD-TADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNS 793
+ ++S Y D T R+ A+LA AC++++ G L EMQ +L+ +
Sbjct: 558 EILAGVLSRYLDDGTNRGGGDGRLEAVLAGMACKAAVKAGQVLAPAEMQGLLKEMQGAGI 617
Query: 794 PWNCPHGRPTMRHL 807
CPHGRP +RH
Sbjct: 618 FSRCPHGRPVVRHF 631
Score = 46.2 bits (108), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 43/66 (65%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR + + + ++I AG+V++ +S VKEL+EN++DAGA +I + ++ +V D+G G
Sbjct: 4 IRVLPENLANQIAAGEVVERPASVVKELLENAVDAGARNISVQVEGRAVGLLRVSDDGSG 63
Query: 72 ISPNNF 77
+ ++
Sbjct: 64 MDADDL 69
>gi|448664389|ref|ZP_21684192.1| DNA mismatch repair protein MutL [Haloarcula amylolytica JCM 13557]
gi|445775034|gb|EMA26048.1| DNA mismatch repair protein MutL [Haloarcula amylolytica JCM 13557]
Length = 716
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 86/194 (44%), Gaps = 19/194 (9%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQ--STVLNQQPLLRPLKLDLTP 674
M+++GQ +++ + D L +VDQHAADE+ N+ERL Q L P++L+LT
Sbjct: 518 MRILGQLADTYVVAETDDGLVLVDQHAADERVNYERLKAKFEGETTTQALANPVELELTA 577
Query: 675 EEEVVASMHMDIIRKNGFSLEEDPHALAGLR-FRLKAVPFSKKITFGVEDVKDLISTLAD 733
E V D + GF A G R ++ +P G + V+D++
Sbjct: 578 REAEVFDRRSDALASLGFHT-----ARTGERSVEVRTLPGVIADAAGPDIVRDVLGAFVA 632
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNS 793
E + +L AC S+ +L ++++L L + +
Sbjct: 633 GDDEAAATVEAAA-----------DELLGDLACYPSVTGNTSLTEGSVRELLAALDECEN 681
Query: 794 PWNCPHGRPTMRHL 807
P+ CPHGRPT+ H+
Sbjct: 682 PYACPHGRPTVIHI 695
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 42/61 (68%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ ++ V RI AG+V++ +S VKELVEN++DA AT +E+ ++ G + +V D+G G
Sbjct: 4 IQRLDDRTVERIAAGEVVERPASVVKELVENAIDADATRVEVVVEAGGTDGIRVTDDGVG 63
Query: 72 I 72
+
Sbjct: 64 M 64
Score = 50.4 bits (119), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 79/200 (39%), Gaps = 40/200 (20%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAIC--------KSDSC------KVEGFLSKP 156
T G L++ +++V+G + + V +SDS V G +S P
Sbjct: 197 TFSTTGQDDLRETVMSVYGREVAESMISVGAGSEANADGDESDSFPDGPLDGVHGLVSHP 256
Query: 157 GQGSGRNLGDRQYF--FVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACD 213
N R+Y +VN R V V V + Y + +YP A++ VP D
Sbjct: 257 ET----NRAGREYLSTYVNGRYVRAGTVRDAVIDAYGTQIAPDRYPFAVLFLDVPAGDVD 312
Query: 214 VNVTPDKRKVFFSDECSILHA---------LREGLQEIYSPNNASYSVNKVEQL-IEPEK 263
VNV P K +V F+D+ + LREGL +P S EQ I PE
Sbjct: 313 VNVHPRKMEVRFADDEGVREQVRTAVEDALLREGLLRSTAPRGRSAP----EQTEITPES 368
Query: 264 SGPSSGAESCMFLEQLSPDG 283
G S E+ SPDG
Sbjct: 369 DGTSDSEH-----ERSSPDG 383
>gi|379721010|ref|YP_005313141.1| DNA mismatch repair protein [Paenibacillus mucilaginosus 3016]
gi|378569682|gb|AFC29992.1| DNA mismatch repair protein [Paenibacillus mucilaginosus 3016]
Length = 691
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 114/247 (46%), Gaps = 41/247 (16%)
Query: 576 RCFAAATLELSQPENEERKARALAAATTELERLFRKED---------FGRMKVIGQFNLG 626
R AA E P AR AAA+ L R + + F ++ IGQ +
Sbjct: 452 REAGAAYAERPAPARGPGDARETAAASGALLRALAQTEASAPPALPAFPKLTPIGQLHGT 511
Query: 627 FIIGKLDQDLFIVDQHAADEKYNFER---LSQSTVLNQQPLLRPLKLDLTPEEEVVASMH 683
+I+ + ++ LF+VDQHAA E+ N+E L Q LL P+ L+ T E + +
Sbjct: 512 YIVAQNEEGLFLVDQHAAHERINYEHYFDLFGRPAEASQELLVPMTLEYTSVEALRLTEK 571
Query: 684 MDIIRKNGFSLEEDPHALAGLRFRLKAVPF------SKKITFGVEDVKDLISTLADNQGE 737
+ + + G LE G F ++A P + I VE++ DL+ L D +G
Sbjct: 572 LPQLEQAGVYLE----PFGGTSFLVRAYPHWLPKGEEQAI---VEEMIDLL--LQDKKG- 621
Query: 738 CSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNC 797
I+ ++ + A +C +C++SI ++G E++ +L+ LA +P+ C
Sbjct: 622 -IDIAKFR-EKAAIMC-----------SCKASIKANQSMGTLEIEVLLDRLAACRNPYTC 668
Query: 798 PHGRPTM 804
PHGRP +
Sbjct: 669 PHGRPIV 675
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 56/90 (62%), Gaps = 2/90 (2%)
Query: 15 INKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISP 74
+++ + ++I AG+V++ SS VKELVEN++DAG+T ++++++E G + +V DNG GI
Sbjct: 7 LDEHIANQIAAGEVVERPSSVVKELVENAVDAGSTRVDVSIEEGGLQLIRVTDNGGGIEE 66
Query: 75 NNFKVRAVFLCQAYALIAKGVRFVCTNTTG 104
++ V A F A + IA T G
Sbjct: 67 DD--VEAAFFRHATSKIATSQDLFSIRTLG 94
Score = 45.1 bits (105), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 86/189 (45%), Gaps = 15/189 (7%)
Query: 103 TGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGR 162
T K+ V+L+T GS L + V+G ++ + + ++ K+EG +SKP
Sbjct: 188 TLKHNGHVLLQTLGSGDLLQAVAAVYGSSLAKSMLKIE-GETLDYKLEGLISKPELTRAN 246
Query: 163 NLGDRQYFFVNDRPV-DLPKVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKR 221
G +N R + P L+ + ++P+A+++ + DVNV P K
Sbjct: 247 RGGITT--VINGRYIRSFPVNQALLQGYHTLLPIGRFPVAVLHLTMDPTLVDVNVHPAKL 304
Query: 222 KVFFSDECSIL----HALRE--GLQEIYSPNNASYSVNKV-EQLIEPE----KSGPSSGA 270
+V FS E ++ +A+RE G Q + A + +V EQL++ + + +S A
Sbjct: 305 EVRFSKEPELIALIENAVRETLGRQRLIPQGGAPAAPARVREQLVQEQLELYRPQAASAA 364
Query: 271 ESCMFLEQL 279
E EQL
Sbjct: 365 EPARVREQL 373
>gi|70726617|ref|YP_253531.1| DNA mismatch repair protein [Staphylococcus haemolyticus JCSC1435]
gi|68447341|dbj|BAE04925.1| DNA mismatch repair protein MutL [Staphylococcus haemolyticus
JCSC1435]
Length = 675
Score = 76.6 bits (187), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 91/191 (47%), Gaps = 21/191 (10%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADE--KYNFERLSQSTVLNQ-QPLLRPLKLDLT 673
M+V+GQ + +II + + +F++DQHAA E KY + R V N+ Q LL PL +
Sbjct: 487 MEVVGQVHGTYIIAQNENGMFMIDQHAAQERIKYEYFREKIGEVTNEVQDLLIPLTFHFS 546
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
+E+++ + D + K G LE G + + + P E ++D++ + +
Sbjct: 547 KDEQMIIDQYQDELDKVGVHLEH----FGGHDYIVNSYPVWFPKAEAEEIIQDMVELVLN 602
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNS 793
++ ++ KM ++ S C+ SI L NEM +++ L +
Sbjct: 603 DKK----VNVKKMREDAAIMMS----------CKKSIKANHYLKNNEMADLIDQLREAED 648
Query: 794 PWNCPHGRPTM 804
P+ CPHGRP +
Sbjct: 649 PFTCPHGRPII 659
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 44/66 (66%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ + + ++I AG+V++ SS VKEL+EN++DA +T I I +++ G +VVDNG G
Sbjct: 4 IKELQTSLANKIAAGEVVERPSSVVKELLENAIDAKSTEINIEVEQSGISSIRVVDNGTG 63
Query: 72 ISPNNF 77
I ++
Sbjct: 64 IEQDDL 69
Score = 40.4 bits (93), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 62/133 (46%), Gaps = 8/133 (6%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYF 170
+LKT GS + + ++G+ + L + SD +EGF++KP ++ Y
Sbjct: 195 LLKTNGSGKTNEVMSEIYGIKVAKDLVHIQGDTSD-YHLEGFVAKPEHSRS----NKHYI 249
Query: 171 --FVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSD 227
F+N R + ++K + E Y + +YPI +N + DVNV P K +V S
Sbjct: 250 SIFINGRYIKNFVLNKAIIEGYHTLLTIGRYPICYLNIEMDPILVDVNVHPTKLEVRLSK 309
Query: 228 ECSILHALREGLQ 240
E + + E ++
Sbjct: 310 EEQLYQLIVEKIR 322
>gi|448417841|ref|ZP_21579646.1| DNA mismatch repair protein mutl [Halosarcina pallida JCM 14848]
gi|445677414|gb|ELZ29916.1| DNA mismatch repair protein mutl [Halosarcina pallida JCM 14848]
Length = 752
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 92/193 (47%), Gaps = 16/193 (8%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTV--LNQQPLLRPLKLDLTP 674
M+V+GQ + +++ + + +VDQHAADE+ N+ERL + Q L P++++LT
Sbjct: 552 MRVLGQLHDTYVVAETADGMVLVDQHAADERVNYERLRARLAGDVATQALADPVEVELTA 611
Query: 675 EEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADN 734
E + + + + + GF E +++VP E ++D ++ +
Sbjct: 612 REAALFEEYREALSEVGFRAERTDERT----VEVRSVPAVFAEALRPELLRDALTAFV-S 666
Query: 735 QGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSP 794
+GE S +T D+V +LA AC S+ +L + +L L D +P
Sbjct: 667 EGE-----SGGRETVDAVADE----LLADLACYPSVTGNTSLTEGSVVDLLSALDDCENP 717
Query: 795 WNCPHGRPTMRHL 807
+ CPHGRP + L
Sbjct: 718 YACPHGRPVVIEL 730
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 47/70 (67%)
Query: 10 PTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNG 69
PTIR ++ V +I AG+V++ +S VKELVENSLDA A + +A+ G E +V D+G
Sbjct: 7 PTIRALDDRTVRQIAAGEVVERPASVVKELVENSLDADADRVSVAVDAGGIEGVRVRDDG 66
Query: 70 CGISPNNFKV 79
G++ ++ ++
Sbjct: 67 VGMARDDVEM 76
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 67/135 (49%), Gaps = 7/135 (5%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVE---GFLSKPGQGSGRNLGDR 167
V T+G SL+ +++V+G + + V + D+ VE G +S P + R+ D
Sbjct: 203 VFATEGRGSLESTVLSVYGREVAESMVRVD-HEPDAGPVESVTGLVSHPE--TTRSARDY 259
Query: 168 QYFFVNDRPVDLPKVSKLVNELYKGA-NSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFS 226
FVNDR V + + V + Y G + +YP A++ VP DVNV P K +V F
Sbjct: 260 LSTFVNDRYVTARVLREAVLDAYGGQLATDRYPFAVLFVEVPRETVDVNVHPRKMEVRFD 319
Query: 227 DECSILHALREGLQE 241
DE + A+ +++
Sbjct: 320 DESGVKRAVESAVED 334
>gi|375088943|ref|ZP_09735280.1| DNA mismatch repair protein MutL [Dolosigranulum pigrum ATCC 51524]
gi|374561110|gb|EHR32459.1| DNA mismatch repair protein MutL [Dolosigranulum pigrum ATCC 51524]
Length = 645
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 100/214 (46%), Gaps = 25/214 (11%)
Query: 602 TTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFE---RLSQSTV 658
T + +L ++ F + IGQ + ++ + ++ L+I+DQHAA E+ +E R+
Sbjct: 440 TDQATQLTNRDGFPAVDYIGQMHGTYLFAQNERGLYIIDQHAAQERVKYEYYRRVIDQDG 499
Query: 659 LNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKIT 718
QQ LL P+ L+ E + M+ + G LE A F L + P
Sbjct: 500 TAQQNLLVPIVLEYPTNETIEIRQQMEQLEAAGIFLE----AFGKNTFVLNSHP--SWFI 553
Query: 719 FGVED--VKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDAL 776
G E+ VK++I L D + ++ K A ++ S C+ SI L
Sbjct: 554 HGQEEATVKEMIDFLLDKKE----LTVKKFREATAIMMS----------CKRSIKANHHL 599
Query: 777 GRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDL 810
+E + ++E L++ +P+NCPHGRPT+ L +L
Sbjct: 600 SDDEARALIEDLSNCENPYNCPHGRPTLVQLTNL 633
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Query: 18 GVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGIS---- 73
+ ++I AG+VI+ +S VKEL+EN++DAGA +++ ++E G +V DNG GI
Sbjct: 9 ALANQIAAGEVIERPASVVKELIENAIDAGADKVDVHIEESGMRLIRVTDNGAGIPYEEV 68
Query: 74 PNNFKVRA 81
P FK A
Sbjct: 69 PAAFKRHA 76
Score = 47.4 bits (111), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 69/138 (50%), Gaps = 8/138 (5%)
Query: 108 KSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDR 167
+S + +T G+ +LK I V+G++ + + D KV G++S P N +R
Sbjct: 191 ESTLTRTPGNDNLKQAIAGVYGVSSAKKMRKITGENFD-FKVSGYISLPE----LNRSNR 245
Query: 168 QYF--FVNDRPVDLPKVSKLVNELYKGA-NSRQYPIAIMNFIVPTRACDVNVTPDKRKVF 224
Y VN R + ++K + E Y +YP+A+++ + DVNV P K +V
Sbjct: 246 SYITIVVNGRYIKNYAINKAITEGYGSKLMINRYPLAVLHIEMDPLLLDVNVHPTKHEVR 305
Query: 225 FSDECSILHALREGLQEI 242
S+E + + +++ +Q++
Sbjct: 306 ISNEADLCNLIKQSVQQV 323
>gi|160938811|ref|ZP_02086162.1| hypothetical protein CLOBOL_03705 [Clostridium bolteae ATCC
BAA-613]
gi|158437774|gb|EDP15534.1| hypothetical protein CLOBOL_03705 [Clostridium bolteae ATCC
BAA-613]
Length = 763
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 93/192 (48%), Gaps = 21/192 (10%)
Query: 616 RMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQ---QPLLRPLKLDL 672
+ K+IGQ + + + ++ LFI+DQHAA EK +E +S Q Q + P+ L L
Sbjct: 574 KHKLIGQLFDTYWMVEYNEQLFIIDQHAAHEKVLYENTIKSLKTRQYDMQMVDPPIILTL 633
Query: 673 TPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLA 732
EE++ +MD GF +E G + ++ VP + F + K+L++ +
Sbjct: 634 NMNEELLLEKYMDYFTGIGFEIE----PFGGREYAVRGVPAN---LFSIAK-KELLTEMI 685
Query: 733 DNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLN 792
D E + + P + +AS +C++++ + E +++ L DL
Sbjct: 686 DGLSEDMSVHN----------PDIIYEKVASMSCKAAVKGHHTMSFQEANVLIDQLLDLE 735
Query: 793 SPWNCPHGRPTM 804
+P+ CPHGRPT+
Sbjct: 736 NPYACPHGRPTI 747
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 95/233 (40%), Gaps = 56/233 (24%)
Query: 95 VRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLS 154
+RF+ N L T G+ +LKD I TVFG I L PV I + D V GF
Sbjct: 187 IRFIQNNQNK-------LYTSGNHNLKDLIYTVFGREIAGNLLPVEINE-DWITVTGFTG 238
Query: 155 KPGQG-SGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKG-ANSRQYPIAIMNFIVPTRAC 212
KP S RN + +F+N R + +SK + E YK +YP +++F +
Sbjct: 239 KPVIARSNRNY---ENYFINGRYIKSSIISKAIEEAYKPYMMQHKYPFTMLHFHIEPDTL 295
Query: 213 DVNVTPDKRKVFFSDECSILHALREG--------------------------LQEIYSPN 246
DVNV P K ++ F+D + HA+ L E +P
Sbjct: 296 DVNVHPTKMELRFADGEKVYHAVLRAVSNALAHKELIPQVSLEAKQEKEARQLAEKLAPR 355
Query: 247 NASYSVNKVEQL--------IEPEKSGPSSGAESCM---------FLEQLSPD 282
+ V + E L ++ + GPSSGA S F+ +L PD
Sbjct: 356 PEPFEVRRRENLSQKTSGSPVQVQNGGPSSGAGSVYTQSAPPRPSFVNELMPD 408
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 43/61 (70%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I +++ +++I AG+VI+ +S VKEL+EN++DA AT++ + +K+ G +V DNG G
Sbjct: 4 ITVLDQSTINKIAAGEVIERPASVVKELLENAVDAHATAVTVEIKDGGCSMIRVTDNGWG 63
Query: 72 I 72
I
Sbjct: 64 I 64
>gi|448445521|ref|ZP_21590419.1| DNA mismatch repair protein MutL [Halorubrum saccharovorum DSM
1137]
gi|445685045|gb|ELZ37407.1| DNA mismatch repair protein MutL [Halorubrum saccharovorum DSM
1137]
Length = 789
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 108/232 (46%), Gaps = 33/232 (14%)
Query: 596 RALAAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERL-- 653
R L T ER + + ++V+GQ + +++ + L ++DQHAADE+ N+ERL
Sbjct: 571 RTLDGEPTSAERAY--DSLPPLRVLGQLHETYVVAEAPDGLVLIDQHAADERVNYERLQA 628
Query: 654 SQSTVLNQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLR-FRLKAVP 712
+ + Q L P++++LT E + ++ + GF E AG R +++VP
Sbjct: 629 AFADGAAAQALAEPVRIELTAREAALFEEFVEDLAGAGFRAER-----AGEREVVVESVP 683
Query: 713 --FSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSI 770
F + G+ V+D++S L D+ E D V +LA AC S+
Sbjct: 684 AVFDAALDPGL--VRDVLSALVDDAAE-----------GDEPVTDVVDELLADLACYPSV 730
Query: 771 MIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKNIDENGA 822
+L + +L+ L +P+ CPHGRP + IR + DE G+
Sbjct: 731 TGNTSLTEGSVVDLLDRLDACENPYACPHGRPVV--------IRLDSDEIGS 774
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 46/70 (65%)
Query: 10 PTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNG 69
P I +++ V RI AG+V++ +S VKEL+ENSLDAGAT + ++++ G E +V D+G
Sbjct: 4 PNIERLDERTVQRIAAGEVVERPASVVKELIENSLDAGATRVAVSVEAGGTEGIRVRDDG 63
Query: 70 CGISPNNFKV 79
GI + +
Sbjct: 64 VGIPEDQLEA 73
Score = 46.6 bits (109), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 62/139 (44%), Gaps = 13/139 (9%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCL-----EPVAICKSDSCK-VEGFLSKPGQGSGRNL 164
T+G+ L+ ++ V+G + + EP A + V G +S P
Sbjct: 199 TFATEGNGDLRSAVLAVYGREVAEAMVDVEWEPNASDADPPVRGVTGLVSHPET----TR 254
Query: 165 GDRQYF--FVNDRPVDLPKVSKLVNELYKGA-NSRQYPIAIMNFIVPTRACDVNVTPDKR 221
R+Y +VN R V + + V + Y G +YP A++ VP DVNV P K
Sbjct: 255 STREYLATYVNGRYVTASALREAVLDAYGGQLAPDRYPFAVLFVEVPPGDVDVNVHPRKL 314
Query: 222 KVFFSDECSILHALREGLQ 240
+V F +E ++ A+ + ++
Sbjct: 315 EVRFDEEPAVREAVEDAVK 333
>gi|372281522|ref|ZP_09517558.1| DNA mismatch repair protein [Oceanicola sp. S124]
Length = 626
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 48/65 (73%)
Query: 10 PTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNG 69
P IR ++ ++RI AG+V++ +SAVKELVENSLDAGAT IEI + + G+ ++ D+G
Sbjct: 13 PVIRQLDDAAINRIAAGEVVERPASAVKELVENSLDAGATRIEITVADGGKTLIRIADDG 72
Query: 70 CGISP 74
CGI P
Sbjct: 73 CGIPP 77
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 84/202 (41%), Gaps = 26/202 (12%)
Query: 612 EDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLN---QQPLLRPL 668
ED+ Q + +I+ + + + +VDQHAA E+ +E+L + N Q LL P
Sbjct: 433 EDYPLGAARAQVHENYIVAQTSRGMVLVDQHAAHERLVYEKLKRQMAENGVASQALLIP- 491
Query: 669 KLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLI 728
E++ D R L E LA RF L PF G V++
Sbjct: 492 --------EIIELSQADAQR-----LLEAAEDLA--RFGLVIEPFGG----GAIAVRETP 532
Query: 729 STLADNQGECSI--ISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGRNEMQKIL 785
+ L + E + + D DS+ +R+ A+L+ AC SI G + EM ++L
Sbjct: 533 AILGEINAEALLRDVLDELTDQDDSMALQARIEAILSRVACHGSIRSGRRMQVAEMNELL 592
Query: 786 EHLADLNSPWNCPHGRPTMRHL 807
+ C HGRPT L
Sbjct: 593 RQMEATPHSGQCNHGRPTYVEL 614
>gi|260432213|ref|ZP_05786184.1| DNA mismatch repair protein [Silicibacter lacuscaerulensis
ITI-1157]
gi|260416041|gb|EEX09300.1| DNA mismatch repair protein [Silicibacter lacuscaerulensis
ITI-1157]
Length = 618
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 52/72 (72%)
Query: 8 NSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVD 67
N P IR +++ ++RI AG+V++ +SAVKELVEN++DAGAT I I + + G+ +V D
Sbjct: 11 NRPVIRQLDEAAINRIAAGEVVERPASAVKELVENAIDAGATRIAIDIADGGKTLIRVTD 70
Query: 68 NGCGISPNNFKV 79
+GCGI+P + +
Sbjct: 71 DGCGIAPEDLPL 82
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 79/190 (41%), Gaps = 20/190 (10%)
Query: 621 GQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLN---QQPLLRPLKLDLTPEEE 677
GQ + +II + + IVDQHAA E+ +E+L + N Q LL P ++L+ +
Sbjct: 434 GQVHENYIIAQTADGMVIVDQHAAHERLVYEKLKKQMAENGVAAQALLIPEIVELSEGDC 493
Query: 678 VVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGE 737
D + + G ++E G ++ P + D++ LAD QGE
Sbjct: 494 ARLIAVADDLSRLGLTIEP----FGGGAVAVRETPAILGEVNARAMILDILDELAD-QGE 548
Query: 738 CSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNC 797
+ + R+ A+L+ AC S+ G + EM +L + C
Sbjct: 549 SQTVQA------------RIEAILSRVACHGSVRSGRRMRAEEMNALLREMEATPHSGQC 596
Query: 798 PHGRPTMRHL 807
HGRPT L
Sbjct: 597 NHGRPTYVEL 606
>gi|126736240|ref|ZP_01751983.1| DNA mismatch repair protein [Roseobacter sp. CCS2]
gi|126714406|gb|EBA11274.1| DNA mismatch repair protein [Roseobacter sp. CCS2]
Length = 603
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 51/68 (75%)
Query: 10 PTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNG 69
P IR ++ ++RI AG+V++ +SAVKELVENS+DAGAT IE+ + + G+ +V D+G
Sbjct: 12 PVIRQLDDAAINRIAAGEVLERPASAVKELVENSIDAGATRIEVVIADGGKTLIRVTDDG 71
Query: 70 CGISPNNF 77
CG++P++
Sbjct: 72 CGMTPSDL 79
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 80/189 (42%), Gaps = 20/189 (10%)
Query: 622 QFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLN---QQPLLRPLKLDLTPEEEV 678
Q + +II + + + IVDQHAA E+ +E+L N Q LL P ++L+ E
Sbjct: 420 QVHENYIIAQTENGIVIVDQHAAHERLVYEKLKAQMAENGVAAQALLIPEIVELSENEAA 479
Query: 679 VASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGEC 738
D + K G ++E G ++ P ++D++ LAD QG+
Sbjct: 480 QLRDIADDLAKFGLTIEP----FGGGAIAVRETPAILGEVNAEAMIRDILDELAD-QGDS 534
Query: 739 SIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCP 798
+ + + R+ A+L+ AC SI G + EM +L + C
Sbjct: 535 ASVQA------------RIEAILSRVACHGSIRSGRRMQAAEMNALLREMEATPLSGQCN 582
Query: 799 HGRPTMRHL 807
HGRPT L
Sbjct: 583 HGRPTYVEL 591
>gi|57234054|ref|YP_181908.1| MutL/HexB family DNA mismatch repair protein [Dehalococcoides
ethenogenes 195]
gi|57224502|gb|AAW39559.1| DNA mismatch repair protein, MutL/HexB family [Dehalococcoides
ethenogenes 195]
Length = 566
Score = 76.3 bits (186), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 91/192 (47%), Gaps = 28/192 (14%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLN--QQPLLRPLKLDLTP 674
++++GQ +++ + L+I+DQHAA E+ +E ++ T +Q LL P L+L P
Sbjct: 384 LRLVGQIGGLYLLAEGPDGLYIIDQHAAHERIRYEEIASQTPSENARQSLLDPFILELNP 443
Query: 675 EEEVVASMHMDIIRKNGFSLEEDPHALAGLR-FRLKAVPFSKKITFGVEDVKDLISTLAD 733
+E + + GF +EE G R +R++++P F K L+S L D
Sbjct: 444 VQEAMIEKCKSELDLMGFEIEE-----FGRRVYRVQSIPAG----FTAPQAKALLSELVD 494
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLAS-RACRSSIMIGDALGRNEMQKILEHLADLN 792
N + P+ ++ L AC +++ G L EM+++L L
Sbjct: 495 NPKDA---------------PAEIKERLQRLMACHTAVRAGQVLNEAEMRELLLKLEKTA 539
Query: 793 SPWNCPHGRPTM 804
P +CPHGRPT+
Sbjct: 540 VPGHCPHGRPTI 551
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 45/61 (73%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ ++K + RI AG+VI+ SS VKEL+ENSLDAGA +++ ++E G + +V D+GCG
Sbjct: 3 IKLLDKATIARIAAGEVIERPSSVVKELLENSLDAGAKRVDVVIREGGIGYIEVSDDGCG 62
Query: 72 I 72
I
Sbjct: 63 I 63
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 83/169 (49%), Gaps = 14/169 (8%)
Query: 78 KVRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLE 137
KV V L +YAL V+F + G+N L T G+ L+D ++ ++G ++ + +
Sbjct: 169 KVSEVVL--SYALAYPEVKFTLS-IDGRNT----LNTPGNGKLRDAVLEIYGNDVASKML 221
Query: 138 PVAI--CKSDSCKVEGFLSKPG-QGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGA- 193
+ +S + + G +S P S RN +FFVN R + + K + Y G
Sbjct: 222 DLETDSYRSSAINISGLVSPPEISRSNRN---SLHFFVNRRLIQSRALQKAAEQAYSGLL 278
Query: 194 NSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEI 242
+YP+ ++N + DVN+ P K +V FSDE ++ A++ ++ +
Sbjct: 279 MVGRYPLGVINIWLDGALVDVNIHPTKAEVKFSDESAVFTAVQRAVRSV 327
>gi|426403549|ref|YP_007022520.1| DNA mismatch repair protein MutL [Bdellovibrio bacteriovorus str.
Tiberius]
gi|425860217|gb|AFY01253.1| DNA mismatch repair protein MutL [Bdellovibrio bacteriovorus str.
Tiberius]
Length = 621
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 118/259 (45%), Gaps = 30/259 (11%)
Query: 556 QQRLSIMQSSCHTSGSVKMRRCFAAATLELSQPENEERKARALAAATTELERLFRKED-- 613
QQ L +S + K F A++ +S + + +ALA + + E K +
Sbjct: 365 QQNLRFQDNSLEVTQFQKKEFSFPASSFPVSSVQQPQSTYQALAESAAQREGFAPKSEEA 424
Query: 614 ----FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERL---SQSTVLNQQPLLR 666
+ ++V+GQ NL +I+ + L VDQHAA E+ FE+L + ++ Q L
Sbjct: 425 PLGYWSSLEVLGQANLTYIVTQARDKLVFVDQHAAHERVVFEKLMTAWKGGKVDIQDFLF 484
Query: 667 PLKLDLTPEE-EVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVK 725
PL +D++PE+ E + +M ++ R F AL +KA P K + + V
Sbjct: 485 PLAIDMSPEKVEGLLTMAKEMERLGVFI-----EALGPGTVGVKAAPLMIKES-SLSGVL 538
Query: 726 DLISTLADNQGECSIISSYKMD-TADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKI 784
D ++T +QG SY ++ T +C A+ AC S + G +L ++M+ +
Sbjct: 539 DKMATEIVDQG-----GSYSLERTVGDIC--------ATMACHSVVRAGQSLSPDQMRSL 585
Query: 785 LEHLADLNSPWNCPHGRPT 803
L + CPHGRP
Sbjct: 586 LRDMDMFPLSSFCPHGRPV 604
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
+I+ ++ VV +I AG+V++ + VKELVENS+DAGAT + + + G +V+DNG
Sbjct: 2 SIQILSPEVVDQIAAGEVVERPAHLVKELVENSIDAGATRVHVEFYD-GGRIVKVIDNGK 60
Query: 71 GISPNNF 77
G+SP +
Sbjct: 61 GMSPEDL 67
>gi|383621217|ref|ZP_09947623.1| DNA mismatch repair protein mutL [Halobiforma lacisalsi AJ5]
gi|448693332|ref|ZP_21696701.1| DNA mismatch repair protein mutL [Halobiforma lacisalsi AJ5]
gi|445786191|gb|EMA36961.1| DNA mismatch repair protein mutL [Halobiforma lacisalsi AJ5]
Length = 764
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 90/190 (47%), Gaps = 16/190 (8%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLN--QQPLLRPLKLDLTP 674
++V+GQ + +++ + L +VDQHAADE+ N+ERL + + Q L P++L+LT
Sbjct: 568 LRVMGQLDDTYLVCETPDGLALVDQHAADERVNYERLRDAFADDPPAQALAEPVELELTA 627
Query: 675 EEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADN 734
E S + D + + GF + ++ + VP + T E ++D++++ +
Sbjct: 628 AEAEAFSGYADALERLGFYADR----VSDRTVAVTTVPAVLEETLEPEHLRDVLTSFVEG 683
Query: 735 QGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSP 794
E +T D + L AC S+ +L + +L L D +P
Sbjct: 684 DREAG------AETVDELADE----FLGDLACYPSVTGNTSLTEGSVVDLLAKLDDCENP 733
Query: 795 WNCPHGRPTM 804
+ CPHGRP +
Sbjct: 734 YACPHGRPVI 743
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 51/80 (63%), Gaps = 6/80 (7%)
Query: 6 PTNSPT------IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYG 59
P +PT I +++ V RI AG+V++ +SAVKELVENSLDA A+ +E+ ++E G
Sbjct: 12 PDGAPTNADGTEIHQLDEDTVARIAAGEVVERPASAVKELVENSLDADASRVEVTVEEGG 71
Query: 60 EEWFQVVDNGCGISPNNFKV 79
E +V D+G G++ + +
Sbjct: 72 TELIRVADDGRGMTEADLRA 91
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 57/129 (44%), Gaps = 12/129 (9%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSD-----SCKVEGFLSKPGQGSGRNLG 165
V T G L+ ++ V+G + + + PV D V G +S P N
Sbjct: 218 VFATTGQGDLQAAVLAVYGREVASSMIPVEADGDDLPPGPVDSVSGLVSHPET----NRS 273
Query: 166 DRQYF--FVNDRPVDLPKVSKLVNELYKGA-NSRQYPIAIMNFIVPTRACDVNVTPDKRK 222
R+Y +VNDR V + + + Y S +YP + VP A DVNV P KR+
Sbjct: 274 SREYLATYVNDRAVTADAIREGIMGAYGTQLGSDRYPFVALFLEVPGDAVDVNVHPRKRE 333
Query: 223 VFFSDECSI 231
V F D+ ++
Sbjct: 334 VRFDDDDAV 342
>gi|51245819|ref|YP_065703.1| DNA mismatch repair protein MutL [Desulfotalea psychrophila LSv54]
gi|50876856|emb|CAG36696.1| related to DNA mismatch repair protein MutL [Desulfotalea
psychrophila LSv54]
Length = 312
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 104/212 (49%), Gaps = 32/212 (15%)
Query: 606 ERLFRKEDFGR-MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLN---Q 661
E+L +E+ GR ++++GQ + +I + L ++DQHAA E+ +E+L + N +
Sbjct: 111 EQLLPREEEGRGLEILGQVDNLYIFCRSQAGLVVIDQHAAHERLLYEKLKKHFSANSMVK 170
Query: 662 QPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPF------SK 715
Q LL P ++L+ + + H++ + K GFSL + G + + A+P +
Sbjct: 171 QNLLFPETVELSLYQSQLVEKHLEDLEKMGFSLRD----FGGNSYVIGAIPALAGQIAPQ 226
Query: 716 KITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDA 775
KI F DV + ++ + D DS+ LAS ACR++I G
Sbjct: 227 KIFF---DVLEQFGADGKSRKDAG-------DMLDSI--------LASMACRAAIKAGAR 268
Query: 776 LGRNEMQKILEHLADLNSPWNCPHGRPTMRHL 807
L + EM+ +L +A + +CPHGRP ++
Sbjct: 269 LSQREMESLLADMAAADLFSHCPHGRPVVKQF 300
>gi|259417261|ref|ZP_05741180.1| DNA mismatch repair protein [Silicibacter sp. TrichCH4B]
gi|259346167|gb|EEW57981.1| DNA mismatch repair protein [Silicibacter sp. TrichCH4B]
Length = 643
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 52/73 (71%)
Query: 5 TPTNSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQ 64
T + P IR ++ ++RI AG+V++ +SAVKELVEN++DAGAT I + + + G+ +
Sbjct: 17 TEAHRPVIRQLDDSAINRIAAGEVVERPASAVKELVENAIDAGATRITVEIADGGKTLIR 76
Query: 65 VVDNGCGISPNNF 77
V+DNGCG++P +
Sbjct: 77 VIDNGCGMTPEDL 89
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 80/190 (42%), Gaps = 20/190 (10%)
Query: 621 GQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLN---QQPLLRPLKLDLTPEEE 677
GQ + +II + + IVDQHAA E+ +E+L N Q LL P ++L+ +
Sbjct: 459 GQVHENYIIAQTRDGMVIVDQHAAHERLVYEKLKHQMAENGVATQGLLIPEIVELSDGDC 518
Query: 678 VVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGE 737
D + K G +E A G ++ P ++D++ LAD QGE
Sbjct: 519 ARLLDVADDLAKFGLGIE----AFGGSAVAVRETPAILGEVNAEAMIRDILDELAD-QGE 573
Query: 738 CSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNC 797
++ + R+ A+L+ AC SI G + EM +L + C
Sbjct: 574 SQLVQA------------RLEAILSRVACHGSIRSGRRMRGEEMNALLREMEATPHSGQC 621
Query: 798 PHGRPTMRHL 807
HGRPT L
Sbjct: 622 NHGRPTYVEL 631
>gi|448624280|ref|ZP_21670353.1| DNA mismatch repair protein MutL [Haloferax denitrificans ATCC
35960]
gi|445750247|gb|EMA01686.1| DNA mismatch repair protein MutL [Haloferax denitrificans ATCC
35960]
Length = 748
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 94/194 (48%), Gaps = 24/194 (12%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLN--QQPLLRPLKLDLTP 674
M++IGQ +I+ + D+ L +VDQHAADE+ N+ERL + Q L P++L+LT
Sbjct: 547 MRIIGQLADTYIVAETDEGLVLVDQHAADERVNYERLKGEVEGDTPTQALAEPVELELTA 606
Query: 675 EEEVVASMHMDIIRKNGFSLEEDPHA-LAGLR-FRLKAVP--FSKKITFGVEDVKDLIST 730
E + + + + + GF HA G R ++ VP F + G+ ++D ++
Sbjct: 607 REAALFEEYREALAQVGF------HAGRTGERTVSVRTVPAVFDAALDPGL--LRDALTA 658
Query: 731 LADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLAD 790
+ + K T D+V +L+ AC SI +L + +L L D
Sbjct: 659 FVREE----VDGGRK--TVDAVADE----LLSDLACYPSITGNTSLREGSVLDLLAALDD 708
Query: 791 LNSPWNCPHGRPTM 804
+P+ CPHGRP +
Sbjct: 709 CENPYACPHGRPVI 722
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 46/68 (67%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ +++ + RI AG+V++ +S VKEL ENSLDA AT I +A+ G E ++ D+G G
Sbjct: 4 IKQLDEKTIQRIAAGEVVERPASVVKELFENSLDADATRISVAVDAGGVEGVRIRDDGVG 63
Query: 72 ISPNNFKV 79
+S ++ ++
Sbjct: 64 MSEDDLEL 71
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 78/175 (44%), Gaps = 15/175 (8%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYF 170
V T+G L+ +++V+G + + PV + V G +S P + R+ D
Sbjct: 197 VFATEGRGDLQSTVLSVYGREVAESMVPVD-RDAPGVSVSGLVSHPE--TTRSTRDYLST 253
Query: 171 FVNDRPVDLPKVSKLVNELYKGA-NSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDEC 229
FVNDR V + + V + Y G ++ +YP A++ V A DVNV P K +V + DE
Sbjct: 254 FVNDRYVTDRVLREAVLDAYGGQLDADRYPFAVLFVEVAPDAVDVNVHPRKMEVRWDDET 313
Query: 230 SILHALREGLQEIYSPNNASYSVNKVEQLIEPEKSGPSSGAESCMFLEQLSPDGN 284
+ + E +++ N S G S E+ +E SPDGN
Sbjct: 314 GVKRDVTEAVEDALLSNGLVRSSA---------PRGRSKADEAA--IEPGSPDGN 357
>gi|313896663|ref|ZP_07830211.1| DNA mismatch repair family protein [Selenomonas sp. oral taxon 137
str. F0430]
gi|312974580|gb|EFR40047.1| DNA mismatch repair family protein [Selenomonas sp. oral taxon 137
str. F0430]
Length = 621
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 98/206 (47%), Gaps = 26/206 (12%)
Query: 620 IGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQ--STVLNQQPLLRPLKLDLTPEEE 677
IGQ +L +I+ + + L+I+DQHAA E+ F+R + +QQ L+ + L E
Sbjct: 435 IGQVDLTYIVAQSTRALYIIDQHAAHERILFDRFCALAEGIPSQQMLVHAI-LSFDAREM 493
Query: 678 VVASMHMDIIRKNGFSLEEDPHALAGLR-FRLKAVPFSKKITFGVEDVKDLISTLADNQG 736
+ ++ + GF +E AG R +RL P ++ +D+I + + G
Sbjct: 494 QYIEENAELFSRLGFRMEP-----AGDREYRLTESPADVP----TDEAEDVIREILVSLG 544
Query: 737 ECSIISSYKMDTADSVCPSRVR-AMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPW 795
E + P+ +R A LA+ ACR++I G+ L +M+ +LE L P+
Sbjct: 545 ELH-----------AATPAELRQAGLATMACRAAIKAGEELSFRQMEILLEELRTTPFPF 593
Query: 796 NCPHGRPTMRHLVDLTTIRKNIDENG 821
CPHGRPT+ D T + K G
Sbjct: 594 TCPHGRPTILTF-DTTDLAKMFKRTG 618
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 73/147 (49%), Gaps = 11/147 (7%)
Query: 96 RFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAIC-KSDSCKVEGFLS 154
RFV N + L T G SL+ I +++G + L P+ ++ ++ G++S
Sbjct: 188 RFVNNN-------RLTLMTAGDDSLRRAIESIYGGDAAGALIPLDFTDEAGDIRITGYIS 240
Query: 155 KPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQ-YPIAIMNFIVPTRACD 213
KP R+ Q + VN R + ++K ++ +Y+ + +P+A++ VP R D
Sbjct: 241 KPSMI--RSSRAWQTYIVNGRTIQNRAIAKAIDNVYRALVPKMGFPLAVLRIEVPQRTID 298
Query: 214 VNVTPDKRKVFFSDECSILHALREGLQ 240
VNV P K ++ F DE I A+ + +Q
Sbjct: 299 VNVHPQKTEMKFEDEGRIFKAVYKTVQ 325
Score = 58.5 bits (140), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 43/61 (70%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I ++ +++I AG+V++ +S VKELVEN++DAGAT+IEI + G + +V DNG G
Sbjct: 4 IHVLDDTTINKIAAGEVVERPASVVKELVENAIDAGATAIEIEIMGGGTSFIRVTDNGRG 63
Query: 72 I 72
+
Sbjct: 64 M 64
>gi|448633065|ref|ZP_21674063.1| DNA mismatch repair protein MutL [Haloarcula vallismortis ATCC
29715]
gi|445752422|gb|EMA03846.1| DNA mismatch repair protein MutL [Haloarcula vallismortis ATCC
29715]
Length = 717
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 86/194 (44%), Gaps = 19/194 (9%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQ--STVLNQQPLLRPLKLDLTP 674
M+++GQ +++ + D L +VDQHAADE+ N+ERL Q L P++L+LT
Sbjct: 519 MRILGQLADTYVVAETDDGLVLVDQHAADERVNYERLKAKFEGETTTQALADPVELELTA 578
Query: 675 EEEVVASMHMDIIRKNGFSLEEDPHALAGLR-FRLKAVPFSKKITFGVEDVKDLISTLAD 733
E V D + GF A G R ++ +P G + V+D++
Sbjct: 579 REAEVFDRRSDALASLGFHT-----ARTGERSVEVRTLPGVIADVAGPDIVRDVLGAFVA 633
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNS 793
E + +L AC S+ +L ++++L L + +
Sbjct: 634 GDDEAAATVEAAA-----------DELLGDLACYPSVTGNTSLTEGSVRELLAALDECEN 682
Query: 794 PWNCPHGRPTMRHL 807
P+ CPHGRPT+ H+
Sbjct: 683 PYACPHGRPTVIHI 696
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 43/68 (63%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ ++ V RI AG+V++ +S VKELVEN++DA A +E+ ++ G + +V D+G G
Sbjct: 4 IQRLDDRTVERIAAGEVVERPASVVKELVENAIDADANRVEVVVEAGGTDGIRVTDDGVG 63
Query: 72 ISPNNFKV 79
+ + K
Sbjct: 64 MDRDAVKT 71
Score = 47.4 bits (111), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 73/184 (39%), Gaps = 35/184 (19%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAIC--------KSDSC------KVEGFLSKP 156
T G L++ +++V+G + + V ++DS V G +S P
Sbjct: 197 TFSTTGQGDLRETVMSVYGREVAESMISVGAGSGANAGDDETDSFPDGPLDGVHGLVSHP 256
Query: 157 GQGSGRNLGDRQYF--FVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACD 213
N R+Y +VN R V V V + Y + +YP A++ VP D
Sbjct: 257 ET----NRAGREYLSTYVNGRYVRAGTVRDAVIDAYGTQIAPDRYPFAVLFLDVPAGDVD 312
Query: 214 VNVTPDKRKVFFSDECSILHA---------LREGLQEIYSPNNASYSVNKVEQL-IEPEK 263
VNV P K +V F+D+ + LREGL +P S EQ I PE
Sbjct: 313 VNVHPRKLEVRFADDEGVREQVRTAVEDALLREGLLRSTAPRGRSAP----EQTEITPES 368
Query: 264 SGPS 267
G S
Sbjct: 369 DGAS 372
>gi|448543492|ref|ZP_21625046.1| DNA mismatch repair protein MutL [Haloferax sp. ATCC BAA-646]
gi|448550584|ref|ZP_21628887.1| DNA mismatch repair protein MutL [Haloferax sp. ATCC BAA-645]
gi|448559186|ref|ZP_21633438.1| DNA mismatch repair protein MutL [Haloferax sp. ATCC BAA-644]
gi|445706215|gb|ELZ58098.1| DNA mismatch repair protein MutL [Haloferax sp. ATCC BAA-646]
gi|445711089|gb|ELZ62883.1| DNA mismatch repair protein MutL [Haloferax sp. ATCC BAA-645]
gi|445711556|gb|ELZ63347.1| DNA mismatch repair protein MutL [Haloferax sp. ATCC BAA-644]
Length = 742
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 90/192 (46%), Gaps = 20/192 (10%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLN--QQPLLRPLKLDLTP 674
M++IGQ +I+ + D+ L +VDQHAADE+ N+ERL + Q L P+ L+LT
Sbjct: 541 MRIIGQLADTYIVAETDEGLVLVDQHAADERVNYERLRGEVEGDTPTQALAEPVDLELTA 600
Query: 675 EEEVVASMHMDIIRKNGFSLEEDPHA-LAGLR-FRLKAVPFSKKITFGVEDVKDLISTLA 732
E + + + + + GF HA G R ++ VP E ++D ++
Sbjct: 601 REATLFEEYREALAQVGF------HAGRTGERTVSVRTVPAVFDAALDPELLRDALTAFV 654
Query: 733 DNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLN 792
+ + K T D+V +L+ AC SI +L + +L L D
Sbjct: 655 REE----VDGGRK--TVDAVADE----LLSDLACYPSITGNTSLREGSVLDLLAALDDCE 704
Query: 793 SPWNCPHGRPTM 804
+P+ CPHGRP +
Sbjct: 705 NPYACPHGRPVI 716
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 46/68 (67%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ +++ + RI AG+V++ +S VKEL ENSLDA AT I +A+ G E ++ D+G G
Sbjct: 4 IKQLDEKTIQRIAAGEVVERPASVVKELFENSLDADATRISVAVDAGGVEGVRIRDDGVG 63
Query: 72 ISPNNFKV 79
+S ++ ++
Sbjct: 64 MSEDDLEL 71
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 65/132 (49%), Gaps = 4/132 (3%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYF 170
V T+G L+ +++V+G + + PV + V G +S P + R+ D
Sbjct: 197 VFATEGRGDLQSTVLSVYGREVAESMVPVD-HDAPGVSVSGLVSHPE--TTRSTRDYLST 253
Query: 171 FVNDRPVDLPKVSKLVNELYKGA-NSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDEC 229
FVNDR V + + V + Y G ++ +YP A++ V A DVNV P K +V + DE
Sbjct: 254 FVNDRYVTDRVLREAVLDAYGGQLDADRYPFAVLFVEVAPDAVDVNVHPRKMEVRWDDEA 313
Query: 230 SILHALREGLQE 241
+ + E +++
Sbjct: 314 GVKREVTEAVED 325
>gi|336432332|ref|ZP_08612167.1| hypothetical protein HMPREF0991_01286 [Lachnospiraceae bacterium
2_1_58FAA]
gi|336018669|gb|EGN48406.1| hypothetical protein HMPREF0991_01286 [Lachnospiraceae bacterium
2_1_58FAA]
Length = 664
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 606 ERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERL---SQSTVLNQQ 662
E L ++E K+IGQ + + + + L+I+DQHAA E+ +ER ++ Q
Sbjct: 464 EHLLKREKKAEYKLIGQVFETYWLVEFENSLYIIDQHAAHERVLYERTLKEMKNREFTAQ 523
Query: 663 PLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVE 722
L P+ L L+ +E V + +MD + GF +E G + ++A+P
Sbjct: 524 YLSPPIILSLSMQEAQVLNENMDRFTRIGFEIE----PFGGEEYAVRAIP---------- 569
Query: 723 DVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQ 782
D + +A + ++ + S+ P + +AS +C++++ + L E
Sbjct: 570 ---DNLFGIAKKELLLEMLDDLADGISTSMTPELIDEKVASMSCKAAVKGNNRLSAQEAD 626
Query: 783 KILEHLADLNSPWNCPHGRPTM 804
++ L L +P++CPHGRPT+
Sbjct: 627 ALIGELLLLENPYHCPHGRPTI 648
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 52/84 (61%), Gaps = 2/84 (2%)
Query: 10 PTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNG 69
P I+ +++ + +I AG+VI+ +S VKELVENS+DA A S+ + +++ G +V DNG
Sbjct: 2 PQIQVLDQITIDKIAAGEVIERPASIVKELVENSIDAKAASVTVEIQDGGISLIRVTDNG 61
Query: 70 CGISPNNFKVRAVFLCQAYALIAK 93
GI + +R FL + + I K
Sbjct: 62 SGIERED--IRNAFLRHSTSKIRK 83
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 64/131 (48%), Gaps = 6/131 (4%)
Query: 112 LKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSG-RNLGDRQYF 170
++T G+ LKD I +++G L + D ++G+L KP G RN + +
Sbjct: 197 MRTSGNGKLKDVIYSIYGREAAANLIELDYS-MDGLVMKGYLGKPVITRGNRNFEN---Y 252
Query: 171 FVNDRPVDLPKVSKLVNELYKG-ANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDEC 229
FVN R V +SK + + YK ++P +++F V DVNV P K ++ F +
Sbjct: 253 FVNGRYVKNAMLSKAIEDAYKDFLMQHKFPFVVIHFQVDGEKIDVNVHPTKMEMRFQRQQ 312
Query: 230 SILHALREGLQ 240
+ + + EG+
Sbjct: 313 DVYNIVYEGVH 323
>gi|290978294|ref|XP_002671871.1| predicted protein [Naegleria gruberi]
gi|284085443|gb|EFC39127.1| predicted protein [Naegleria gruberi]
Length = 662
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 51/68 (75%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+P+++ V+++I AG+VI S+A+KEL+ENSLDAGA SI I + G ++FQ+ DNGCG
Sbjct: 21 IKPLSEEVINKIAAGEVIAAPSNAIKELLENSLDAGADSITIEFGDAGLKYFQITDNGCG 80
Query: 72 ISPNNFKV 79
I + ++
Sbjct: 81 IGAKDLEI 88
>gi|154504381|ref|ZP_02041119.1| hypothetical protein RUMGNA_01885 [Ruminococcus gnavus ATCC 29149]
gi|153795310|gb|EDN77730.1| DNA mismatch repair domain protein [Ruminococcus gnavus ATCC 29149]
Length = 664
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 96/202 (47%), Gaps = 20/202 (9%)
Query: 606 ERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERL---SQSTVLNQQ 662
E L ++E K+IGQ + + + + L+I+DQHAA E+ +ER ++ Q
Sbjct: 464 EHLLKREKKAEYKLIGQVFETYWLVEFENSLYIIDQHAAHERVLYERTLKEMKNREFTAQ 523
Query: 663 PLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVE 722
L P+ L L+ +E V + +MD + GF +E G + ++A+P
Sbjct: 524 YLSPPIILSLSMQEAQVLNENMDRFTRIGFEIE----PFGGEEYAVRAIP---------- 569
Query: 723 DVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQ 782
D + +A + ++ + S+ P + +AS +C++++ + L E
Sbjct: 570 ---DNLFGIAKKELLLEMLDDLTDGISTSMTPELIDEKVASMSCKAAVKGNNRLSAQEAD 626
Query: 783 KILEHLADLNSPWNCPHGRPTM 804
++ L L +P++CPHGRPT+
Sbjct: 627 ALIGELLLLENPYHCPHGRPTI 648
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 52/84 (61%), Gaps = 2/84 (2%)
Query: 10 PTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNG 69
P I+ +++ + +I AG+VI+ +S VKELVENS+DA A S+ + +++ G +V DNG
Sbjct: 2 PQIQVLDQITIDKIAAGEVIERPASIVKELVENSIDAKAASVTVEIQDGGISLIRVTDNG 61
Query: 70 CGISPNNFKVRAVFLCQAYALIAK 93
GI + +R FL + + I K
Sbjct: 62 SGIERED--IRNAFLRHSTSKIRK 83
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 64/131 (48%), Gaps = 6/131 (4%)
Query: 112 LKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSG-RNLGDRQYF 170
++T G+ LKD I +++G L + D ++G+L KP G RN + +
Sbjct: 197 MRTSGNGKLKDVIYSIYGREAAANLIELDYS-MDGLVMKGYLGKPVITRGNRNFEN---Y 252
Query: 171 FVNDRPVDLPKVSKLVNELYKG-ANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDEC 229
FVN R V +SK + + YK ++P +++F V DVNV P K ++ F +
Sbjct: 253 FVNGRYVKNAMLSKAIEDAYKDFLMQHKFPFVVIHFQVDGEKIDVNVHPTKMEMRFQRQQ 312
Query: 230 SILHALREGLQ 240
+ + + EG+
Sbjct: 313 DVYNIVYEGVH 323
>gi|379012062|ref|YP_005269874.1| DNA mismatch repair protein MutL [Acetobacterium woodii DSM 1030]
gi|375302851|gb|AFA48985.1| DNA mismatch repair protein MutL [Acetobacterium woodii DSM 1030]
Length = 694
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 99/202 (49%), Gaps = 16/202 (7%)
Query: 610 RKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERL----SQSTVLNQQPLL 665
R ED +MK++GQ +I+ + +++++++DQHAA E + + L + L Q L+
Sbjct: 492 RVEDLVKMKIVGQLFNVYILLEGEKEIYLLDQHAAHEAFLTKELLDIFDRGEGLPSQGLM 551
Query: 666 RPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVK 725
L P++ ++ RK GF D +++VP + G
Sbjct: 552 TADALKFHPKDLEQVEAKLEDYRKLGF----DCDIFGADTLLVRSVP----VLLGEPQSA 603
Query: 726 DLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKIL 785
DL+ + D +I + + S+ +++ + S AC+++I G L + E++K+L
Sbjct: 604 DLLKKMIDE----NIFINDDESLSKSMFSKKMKNKIISMACKAAIKGGQPLTQREIKKLL 659
Query: 786 EHLADLNSPWNCPHGRPTMRHL 807
E+L L +P+ CPHGRP + L
Sbjct: 660 ENLMALENPYTCPHGRPIIMRL 681
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 84/159 (52%), Gaps = 9/159 (5%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICK 143
L Q A+ G+R + N + +VL T+G+ ++ D + ++G++I N L P+ +
Sbjct: 173 LAQKIAISHSGIR-IQVNCNDR----IVLDTKGTGNVIDVVKELYGVDIANNLIPLD-YE 226
Query: 144 SDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGA-NSRQYPIAI 202
+ K+ GF+ + RN + Q FF+N R + +++ ++E Y+G Q+P+ I
Sbjct: 227 NKPMKLTGFVG--NLKTLRNHREDQIFFINGRYIKNNHLAQALDEAYEGYCMKHQHPMGI 284
Query: 203 MNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQE 241
+ +P R DVN+ P K ++ +E + ++G++E
Sbjct: 285 IFIELPGRMLDVNIHPAKTEIKILNESLVCLLFKQGIRE 323
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 43/66 (65%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ +N +++I AG+VI S VKEL+EN++DAGA I I ++ G+ V DNGCG
Sbjct: 3 IKMLNNETINKIAAGEVIIRPVSVVKELMENAIDAGADQIVIIIEAGGKNRITVRDNGCG 62
Query: 72 ISPNNF 77
IS ++
Sbjct: 63 ISYDDL 68
>gi|310658533|ref|YP_003936254.1| DNA mismatch repair protein [[Clostridium] sticklandii]
gi|308825311|emb|CBH21349.1| DNA mismatch repair protein [[Clostridium] sticklandii]
Length = 634
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 98/198 (49%), Gaps = 23/198 (11%)
Query: 613 DFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTV---LNQQPLLRPLK 669
++ + VIG F +II + ++ L+++DQHAA E+ +E+ S ++ Q LL P+
Sbjct: 444 NYKDLSVIGVFINSYIITQYNEALYVIDQHAAHERILYEKYLNSYKNDKISSQNLLIPIS 503
Query: 670 LDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIS 729
++++ + V +D++ GF+ E P + L R A+P F + +L +
Sbjct: 504 INISFDVSVYIHDIIDLLNDYGFNAE--PFSQESLVIR--AIPN----IFNQNEAINLAN 555
Query: 730 TLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLA 789
L +N + +S ++ +AS+AC+S+I D L R E+ +IL L
Sbjct: 556 ELINNFSKQIYLSD------------ELKEKIASKACKSAIKANDKLLRLEISQILSDLD 603
Query: 790 DLNSPWNCPHGRPTMRHL 807
+ ++CPHGRP L
Sbjct: 604 SCENKYSCPHGRPITIEL 621
Score = 56.6 bits (135), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 44/65 (67%)
Query: 8 NSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVD 67
N I+ ++ + I AG+V++ +S VKEL+ENS+DA ATSI + +++ G+ + +V D
Sbjct: 3 NKNQIKQLDDKTISLIAAGEVVESPASIVKELIENSIDAKATSIVLEIRDGGKSYIRVTD 62
Query: 68 NGCGI 72
+G GI
Sbjct: 63 DGFGI 67
Score = 48.1 bits (113), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 66/146 (45%), Gaps = 8/146 (5%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICK 143
+ + ALI V+F N V+L T + + +++ ++ ++ + I
Sbjct: 177 IVERLALINNSVKFKYINNN-----KVMLTTSSNLTFSESMNNIYNNAYDKSIKELPIEY 231
Query: 144 SDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELY-KGANSRQYPIAI 202
D +EGFL S QY FVN R V ++ +V E Y + ++PI +
Sbjct: 232 IDDYGIEGFLGDNSIMSHN--RKNQYIFVNKRVVKSKLITSVVEEAYSQFITINRFPIFL 289
Query: 203 MNFIVPTRACDVNVTPDKRKVFFSDE 228
+N V DVN+ P+K +V FS+E
Sbjct: 290 INLNVDPALIDVNIHPNKLEVKFSNE 315
>gi|42523070|ref|NP_968450.1| DNA mismatch repair protein MutL [Bdellovibrio bacteriovorus HD100]
gi|39575275|emb|CAE79443.1| DNA mismatch repair protein MutL [Bdellovibrio bacteriovorus HD100]
Length = 626
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 70/259 (27%), Positives = 118/259 (45%), Gaps = 30/259 (11%)
Query: 556 QQRLSIMQSSCHTSGSVKMRRCFAAATLELSQPENEERKARALAAATTELERLFRKED-- 613
QQ L +S + K F A++ +S + + +ALA + + E K +
Sbjct: 370 QQNLRFQDNSLEVTQFQKKEFSFPASSFPVSSLQQPQTTYQALAESAAQRESFAPKAEEA 429
Query: 614 ----FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERL---SQSTVLNQQPLLR 666
+ ++V+GQ NL +I+ + L VDQHAA E+ FE+L + ++ Q L
Sbjct: 430 SLGYWSSLEVLGQANLTYIVTQSRDKLVFVDQHAAHERVVFEKLMNAWKGGKVDIQDFLF 489
Query: 667 PLKLDLTPEE-EVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVK 725
PL +D++PE+ E + +M ++ R F AL +KA P K + + V
Sbjct: 490 PLAIDMSPEKVEGLLTMAKEMERLGVFI-----EALGPGTVGVKAAPLMIKES-SLSGVL 543
Query: 726 DLISTLADNQGECSIISSYKMD-TADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKI 784
D ++T +QG SY ++ T +C A+ AC S + G +L ++M+ +
Sbjct: 544 DKMATEIVDQG-----GSYSLERTVGDIC--------ATMACHSVVRAGQSLSPDQMRSL 590
Query: 785 LEHLADLNSPWNCPHGRPT 803
L + CPHGRP
Sbjct: 591 LRDMDMFPLSSFCPHGRPV 609
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
+I+ ++ VV +I AG+V++ + VKELVENS+DAGAT + + + G +V+DNG
Sbjct: 7 SIQILSPEVVDQIAAGEVVERPAHLVKELVENSIDAGATRVHVEFYD-GGRIVKVIDNGK 65
Query: 71 GISPNNF 77
G+SP +
Sbjct: 66 GMSPEDL 72
>gi|291528991|emb|CBK94577.1| DNA mismatch repair protein MutL [Eubacterium rectale M104/1]
Length = 648
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 94/193 (48%), Gaps = 23/193 (11%)
Query: 616 RMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFE----RLSQSTVLNQQPLLRPLKLD 671
+ +IGQ + + + + L+I+DQHAA EK +E RL+ +Q+ + P+ +
Sbjct: 459 QFSIIGQLFKTYWLIEFEDKLYIIDQHAAHEKVLYEKTMARLANKDFTSQR-ISPPIVMT 517
Query: 672 LTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTL 731
L E + + I + G+ +E G + + A+P + F + D+KDL +
Sbjct: 518 LDARESEMLEKYRPQIEQFGYEVEH----FGGKEYMISAIPDN---LFNI-DMKDLFIEM 569
Query: 732 ADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADL 791
D+ + P + +AS +C++++ D L E+ K+++ L L
Sbjct: 570 LDDFSNAT----------GRQTPDIITEKVASMSCKAAVKGNDKLTLPEINKLIDELLSL 619
Query: 792 NSPWNCPHGRPTM 804
++P+NCPHGRPT+
Sbjct: 620 DNPYNCPHGRPTI 632
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 45/63 (71%)
Query: 10 PTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNG 69
P I +N+ + +I AG+V++ S VKELVEN++DAG+T+I + +KE G + ++ DNG
Sbjct: 2 PNIAILNQETIDKIAAGEVVERPCSVVKELVENAIDAGSTAITVEIKEGGISFIRITDNG 61
Query: 70 CGI 72
CGI
Sbjct: 62 CGI 64
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 65/136 (47%), Gaps = 9/136 (6%)
Query: 112 LKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQY-- 169
L T G+ + KD I +FG I + L V + + KVEGF+ KP G+R Y
Sbjct: 197 LHTSGNGNRKDIIYHIFGREISSSLLEVK-HECEYFKVEGFIGKPVITR----GNRNYEN 251
Query: 170 FFVNDRPVDLPKVSKLVNELYKG-ANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDE 228
+F+N R V +S+ + E YK QYP ++ F + DVNV P K ++ F +
Sbjct: 252 YFINGRYVKSNILSRAIEEAYKSFLMQHQYPFTVLYFTFFSE-LDVNVHPTKMELRFDNN 310
Query: 229 CSILHALREGLQEIYS 244
I L + + I S
Sbjct: 311 NEIYVELCDTIYAILS 326
>gi|420201991|ref|ZP_14707586.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM018]
gi|394269964|gb|EJE14487.1| putative DNA mismatch repair protein MutL [Staphylococcus
epidermidis NIHLM018]
Length = 645
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 94/192 (48%), Gaps = 23/192 (11%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADE--KYNFERLSQSTVLNQ-QPLLRPLKLDLT 673
M+++GQ + +II + + +F++DQHAA E KY + R V N+ Q LL PL +
Sbjct: 457 MEIVGQVHGTYIIAQNENGMFMIDQHAAQERIKYEYFREKIGEVTNEVQNLLIPLTFHFS 516
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
+E+++ + D + G LE G + + + P + F E+ +++I + +
Sbjct: 517 KDEQMIIDQYKDELDNVGVHLEH----FGGHDYIVNSYP----VWFPKEEAEEIIKDMIE 568
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLA-SRACRSSIMIGDALGRNEMQKILEHLADLN 792
++ +K SV ++R A +C+ SI L NEM +++ L +
Sbjct: 569 ------LVLKHK-----SVDVKKIREDAAIMMSCKKSIKANHYLKNNEMADLIDQLREAE 617
Query: 793 SPWNCPHGRPTM 804
P+ CPHGRP +
Sbjct: 618 DPFTCPHGRPII 629
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 43/62 (69%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ + + ++I AG+V++ SS VKEL+EN++DA AT I I +++ G +VVDNG G
Sbjct: 4 IKELETSLANKIAAGEVVERPSSVVKELLENAIDAQATEINIEVEQSGVSSIRVVDNGTG 63
Query: 72 IS 73
I+
Sbjct: 64 IA 65
Score = 39.7 bits (91), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 13/145 (8%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYF 170
+L T GS + + ++GM + L ++ SD +EGF++KP ++ Y
Sbjct: 195 LLSTNGSGRTNEVMAEIYGMKVAKDLVHISGDTSD-YHLEGFVAKPEHSRS----NKHYI 249
Query: 171 --FVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSD 227
F+N R + ++K + E Y + ++PI +N + DVNV P K +V S
Sbjct: 250 SIFINGRYIKNFVLNKAILEGYHTLLTIGRFPICYINIQMDPILVDVNVHPTKLEVRLSK 309
Query: 228 ECS----ILHALREGLQE-IYSPNN 247
E I+ +RE ++ I P N
Sbjct: 310 EDQLYDLIVTKIREAFKDKILIPQN 334
>gi|290983030|ref|XP_002674232.1| predicted protein [Naegleria gruberi]
gi|284087821|gb|EFC41488.1| predicted protein [Naegleria gruberi]
Length = 447
Score = 75.9 bits (185), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 96/218 (44%), Gaps = 45/218 (20%)
Query: 611 KEDFGRMKVIGQFNLGFIIGKLDQD----LFIVDQHAADEKYNFERLSQSTVLNQQ---- 662
K ++K I Q+ FI+ L + L +DQHAADE+ E + Q+ + Q
Sbjct: 249 KNQMKQLKFINQWEKKFILTSLKTENSLLLIAIDQHAADERVRMEMIQQNILDYAQQSPG 308
Query: 663 PLLRPLKLDLTPEEEVVASMHMDIIRKNGFSL-----------EEDPHALAGLRFRLKAV 711
P ++PL +V S + ++++N L EE +A +L +
Sbjct: 309 PWVQPLSKQTLNSTKVEGSKTISLLKQNKDKLSKWYWNFIIIHEESTNAF----LKLNTI 364
Query: 712 P--FSKK--ITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVC--PSRVRAMLASRA 765
P F +K I G E + +S L DS C P RV ++ S+A
Sbjct: 365 PCLFVEKDSIELGFESMMSFLSELE----------------FDSTCWYPKRVLELIQSKA 408
Query: 766 CRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPT 803
CR +IM GD L + ++L+ L++ P+ C HGRP+
Sbjct: 409 CRGAIMFGDVLSTEKCNQLLQQLSNCQLPFQCAHGRPS 446
>gi|217967465|ref|YP_002352971.1| DNA mismatch repair protein MutL [Dictyoglomus turgidum DSM 6724]
gi|226723033|sp|B8E280.1|MUTL_DICTD RecName: Full=DNA mismatch repair protein MutL
gi|217336564|gb|ACK42357.1| DNA mismatch repair protein MutL [Dictyoglomus turgidum DSM 6724]
Length = 572
Score = 75.9 bits (185), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 94/194 (48%), Gaps = 21/194 (10%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQST---VLNQQPLLRPLKLDLT 673
+++GQ +II + ++I+DQHAA E+ +E L + L +L PL ++++
Sbjct: 385 FRIVGQIFDNYIIVETKDRVYIIDQHAAHERIRYEELKKELSLGYLQNVEILFPLVIEVS 444
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
EE+ + + H D++ K FS E+ R+ VP+ + + F + +++L
Sbjct: 445 EEEKELLNKHKDLLEKFAFSWED----FGPYHIRIIRVPY-EFLKFDSKSIENLFQ---- 495
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNS 793
IIS D ++ ++ S AC S+I G+ L R EM+ ++ + +
Sbjct: 496 -----EIIS----DISEKDLSKLEDKIIKSMACHSAIRSGNILVREEMEVLINLIFERKI 546
Query: 794 PWNCPHGRPTMRHL 807
P CPHGRP + +
Sbjct: 547 PLTCPHGRPYIWEI 560
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 67/129 (51%), Gaps = 4/129 (3%)
Query: 114 TQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVN 173
T G+ L+D + +F + I+N L + K + +EGF+SKPG+ +L + YF+VN
Sbjct: 198 TSGNGKLEDVVSLLFDIEIHNNLIFLQ-RKEGNYIIEGFISKPGKLI--SLKSQDYFYVN 254
Query: 174 DRPVDLPKVSKLVNELYKGANSRQY-PIAIMNFIVPTRACDVNVTPDKRKVFFSDECSIL 232
R V + + + E YK Y P +I+ +P DVNV P KR++ F E +
Sbjct: 255 RRWVRNNIILQAIKEGYKNRLLEGYFPFSIVFLTLPYHEVDVNVHPTKREIKFEKEKEVY 314
Query: 233 HALREGLQE 241
+ + ++E
Sbjct: 315 EFVSKAIKE 323
Score = 49.3 bits (116), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 35/55 (63%)
Query: 22 RICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNN 76
+I AG+VI+ S VKELVENS+DAGA I + GE V+D+G G++ +
Sbjct: 14 KIAAGEVIERPVSVVKELVENSIDAGAKRITVEFINGGETLISVIDDGEGMTKED 68
>gi|452824226|gb|EME31230.1| DNA mismatch repair protein MLH3 [Galdieria sulphuraria]
Length = 604
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 101/209 (48%), Gaps = 26/209 (12%)
Query: 611 KEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTV--LNQQPL---- 664
+ F +M G +N FI+ ++ L+ +DQHAADE+ +E L + +N+ +
Sbjct: 399 RATFQKMVYKGVWNRSFILFWAEETLYAMDQHAADERVQYENLQYQLLELVNKSSIPTKA 458
Query: 665 ---LRP-LKLDLTPEEEVVASMHMDIIRKNGFSLEED---PHALAGLRFRLKAVPFSKKI 717
+ P + L L EE A +MD + + G+ L + P+ A R R+ +PF
Sbjct: 459 LNEVEPEMYLQLNVEEYECAYRYMDRLLQWGWRLSFESISPYDKAP-RIRILEMPF---- 513
Query: 718 TFGVEDVKDLISTLADNQGEC--SIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDA 775
+ D+++ AD E S++ + + P + LA++AC+ +I GD
Sbjct: 514 ------LPDMLTIHADILREQIQSMVVAKSPNVIFQQIPQAILQELATKACQKAIKFGDY 567
Query: 776 LGRNEMQKILEHLADLNSPWNCPHGRPTM 804
L ++ ++LE L + P+ C HGRP++
Sbjct: 568 LTYQQISQLLEQLKECKYPFQCAHGRPSI 596
>gi|283768572|ref|ZP_06341484.1| DNA mismatch repair protein, C-terminal domain protein [Bulleidia
extructa W1219]
gi|283104964|gb|EFC06336.1| DNA mismatch repair protein, C-terminal domain protein [Bulleidia
extructa W1219]
Length = 577
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 97/196 (49%), Gaps = 18/196 (9%)
Query: 610 RKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLK 669
RK +M+VIGQ + FI+ ++ L I+DQHAA E+ +FE Q LNQ P ++ L
Sbjct: 385 RKTTLPQMQVIGQLHDKFILCAYEEGLAILDQHAAQERVHFEEYVQK--LNQNPSMQDL- 441
Query: 670 LDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIS 729
L P +H D R ++E AL L L+ PF + +F + + +
Sbjct: 442 --LVP-----MMLHSD--RTVVERVQEVNEALKDLHITLE--PFGEN-SFVLRTIPIWLK 489
Query: 730 TLADNQGECSIISSYKMDTADSVCPSRV-RAMLASRACRSSIMIGDALGRNEMQKILEHL 788
L ++ +K D + +R+ R +A+ AC SI +L EM++++ L
Sbjct: 490 ELEMEPFLQDVLDGFKND--QEIKYTRLERKHIATLACHHSIRFNRSLTVEEMKEVVRQL 547
Query: 789 ADLNSPWNCPHGRPTM 804
+P++CPHGRPT+
Sbjct: 548 YTCENPYHCPHGRPTI 563
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 42/61 (68%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ + + + I AG+V++ S VKEL+EN++DA +T I+I+++E G + +V DNG G
Sbjct: 4 IKQLEAHIANMIAAGEVVERPSGVVKELIENAIDAQSTKIKISIEEGGIQRIRVEDNGIG 63
Query: 72 I 72
+
Sbjct: 64 M 64
Score = 43.1 bits (100), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 8/135 (5%)
Query: 110 VVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQY 169
V +T GS +LK+ I V+G ++ L P D V G+ KP R+ + +
Sbjct: 193 VSFQTTGSGNLKEVIFLVYGRSVAENLVPFEFRDQD-FYVRGYGVKPL--ITRSARNHIH 249
Query: 170 FFVNDRPVDLPKVSKLVNELYKGANSR-QYPIAIMNFIVPTRACDVNVTPDKRKVFFSD- 227
F N R V ++ + V Y+ + +YPI +++ + DVNV P K ++ S
Sbjct: 250 LFFNGRMVRQYRLDQAVQHGYEDFIVKGRYPIVVLSMELDPHLIDVNVHPSKWEIRLSKL 309
Query: 228 ---ECSILHALREGL 239
E I + +R+ L
Sbjct: 310 ANLEALIENGIRKAL 324
>gi|443926589|gb|ELU45202.1| DNA binding protein [Rhizoctonia solani AG-1 IA]
Length = 774
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 56/79 (70%), Gaps = 4/79 (5%)
Query: 10 PTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNG 69
P I+ +++ +V+RI AG++I SSA+KEL+EN+LDAGATSI+I K+ G + Q+ DNG
Sbjct: 18 PIIKRLDETLVNRIAAGEIIHRPSSALKELIENALDAGATSIKITAKDGGMKLLQIQDNG 77
Query: 70 CGISPNNFKVRAVFLCQAY 88
CGI ++ + LC+ +
Sbjct: 78 CGIRKSDLPI----LCERF 92
>gi|390956618|ref|YP_006420375.1| DNA mismatch repair protein MutL [Terriglobus roseus DSM 18391]
gi|390411536|gb|AFL87040.1| DNA mismatch repair protein MutL [Terriglobus roseus DSM 18391]
Length = 695
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 92/190 (48%), Gaps = 22/190 (11%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERL---SQSTVLNQQPLLRPLKLDLT 673
++ +GQ FI+ ++ L+I+DQH A E+ FE++ Q + +Q LL PL +DL
Sbjct: 507 LRPLGQVQNSFILAVNEEGLWIIDQHVAHERILFEKVLRERQVERVQRQRLLMPLLIDLV 566
Query: 674 PEEEVVASMHMDIIRKNGFSLEE-DPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLA 732
P + + D + +NGF E P LA +K+ P G+E + ++
Sbjct: 567 PAQMANFAGMADELNRNGFEAEPFGPRTLA-----VKSAPV------GLEGKELELTLAE 615
Query: 733 DNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLN 792
Q + + M+T R R + AS AC +++ I L ++MQ +L+ L
Sbjct: 616 LLQTDDDAAQADNMET-------RARRIAASIACHAAVKINMPLETSKMQWLLDELGKTE 668
Query: 793 SPWNCPHGRP 802
+P CPHGRP
Sbjct: 669 NPMACPHGRP 678
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 44/61 (72%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR ++ V ++I AG+V++ +S VKEL+EN++DAGAT I I ++ G + ++VDNG G
Sbjct: 4 IRVLSDQVANQIAAGEVVERPASVVKELLENAVDAGATRIRIEVEGGGRKLIRIVDNGHG 63
Query: 72 I 72
+
Sbjct: 64 M 64
>gi|145220427|ref|YP_001131136.1| DNA mismatch repair protein MutL [Chlorobium phaeovibrioides DSM
265]
gi|189030405|sp|A4SGM5.1|MUTL_PROVI RecName: Full=DNA mismatch repair protein MutL
gi|145206591|gb|ABP37634.1| DNA mismatch repair protein MutL [Chlorobium phaeovibrioides DSM
265]
Length = 614
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 96/189 (50%), Gaps = 23/189 (12%)
Query: 620 IGQFNLGFIIGKLDQDLFIVDQHAADEKYNFER---LSQSTVLNQQPLLRPLKLDLTPEE 676
I Q + ++I ++ L I+DQH A E+ +ER + +++V N Q LL P K++L P +
Sbjct: 430 IWQLHNKYLICQIKTGLMIIDQHVAHERVLYERAVDVMETSVPNSQQLLFPQKVELRPWD 489
Query: 677 EVVASMHMDIIRKNGFSLEEDPHALAGLR-FRLKAVPFSKKITFGVEDVKDLISTLADNQ 735
+ D + + GF+L +L G R ++ VP + V ++D+I+ ++N
Sbjct: 490 WEIFEEIRDDLYRLGFNL-----SLFGSRTVMIEGVPQDVRPGSEVSILQDMIAEYSENA 544
Query: 736 GECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPW 795
S K++ D++ S +CR++IM G L EM+ +++ L P+
Sbjct: 545 ------SKLKLEKRDNLA--------KSYSCRNAIMTGQKLSLQEMRSLIDSLFATRDPY 590
Query: 796 NCPHGRPTM 804
CPHGRP +
Sbjct: 591 CCPHGRPVI 599
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 41/56 (73%)
Query: 17 KGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGI 72
+ V ++I AG+V++ S VKEL+EN++DAGA I + + + G+E ++VDNGCG+
Sbjct: 9 ESVANKISAGEVVQRPVSVVKELLENAIDAGADRISVIISDAGKELVRIVDNGCGM 64
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 55/113 (48%), Gaps = 4/113 (3%)
Query: 120 LKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDL 179
L + + +G L PV ++D + GF+ +P R L QYFF+N R V
Sbjct: 204 LNERLDFFYGSGFAESLVPVT-EENDYISIRGFIGRPALQKRRRLD--QYFFINRRLVQN 260
Query: 180 PKVSKLVNELY-KGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSI 231
+S+ + + Y + RQ P A++ F + DVNV P K +V F DE S+
Sbjct: 261 RMLSQALQQAYGELLVERQAPFALLFFEMDPSRIDVNVHPAKLEVRFEDERSV 313
>gi|110597213|ref|ZP_01385501.1| DNA mismatch repair protein MutL [Chlorobium ferrooxidans DSM
13031]
gi|110341049|gb|EAT59517.1| DNA mismatch repair protein MutL [Chlorobium ferrooxidans DSM
13031]
Length = 626
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 89/188 (47%), Gaps = 21/188 (11%)
Query: 620 IGQFNLGFIIGKLDQDLFIVDQHAADEKYNFER---LSQSTVLNQQPLLRPLKLDLTPEE 676
I Q + ++I ++ L I+DQH A E+ +ER + V N Q LL P K++ P E
Sbjct: 442 IWQLHNKYLICQIKTGLMIIDQHVAHERVLYERAVDVMTQNVPNSQQLLFPQKVEFRPWE 501
Query: 677 EVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQG 736
V D + + GF+L ++ VP K V ++++I+ DN
Sbjct: 502 YEVFEEIRDDLYRLGFNL----RLFGNKTIMIEGVPQDVKPGTEVTILQEMIAEYQDNA- 556
Query: 737 ECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWN 796
S K+D D++ S +CR++IM G L EM+ ++++L P++
Sbjct: 557 -----SRLKLDKRDNLA--------KSYSCRNAIMTGQKLNLEEMRTLIDNLFATRDPYS 603
Query: 797 CPHGRPTM 804
CPHGRP +
Sbjct: 604 CPHGRPVI 611
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 42/54 (77%)
Query: 19 VVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGI 72
+ ++I AG+V++ +S VKEL+ENS+DAGA I +++K+ G+E ++VDNG G+
Sbjct: 11 IANKISAGEVVQRPASVVKELLENSIDAGADKITLSVKDAGKELIRIVDNGAGM 64
Score = 48.9 bits (115), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 143 KSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELY-KGANSRQYPIA 201
++D + GFL KP + L QYFF+N R + +S+ V + Y + RQ P
Sbjct: 226 ENDYLSIRGFLGKPAMQKRKKLD--QYFFINRRVIQNRMLSQAVQQAYGELLVERQAPFV 283
Query: 202 IMNFIVPTRACDVNVTPDKRKVFFSDECSI 231
++ + DVNV P K +V F DE S+
Sbjct: 284 LLFLEIDPSRIDVNVHPAKLEVRFDDERSV 313
>gi|399055635|ref|ZP_10743330.1| DNA mismatch repair protein MutL [Brevibacillus sp. CF112]
gi|398046844|gb|EJL39428.1| DNA mismatch repair protein MutL [Brevibacillus sp. CF112]
Length = 786
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 101/209 (48%), Gaps = 26/209 (12%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFE----RLSQSTVLNQQPLLRPLKLDL 672
M +GQ + +I+ + D +++VDQHAA E+ +E +L++ V +Q +L P +++
Sbjct: 595 MYPVGQVHGTYIVAQNDTGMYLVDQHAAQERIFYEYFMAKLAEEGVASQM-MLFPHTVEV 653
Query: 673 TPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTL- 731
T E + +++ G +E A G F ++A P +E +++LI +
Sbjct: 654 TAAEAARLEKRLPLLQSFGLEVE----AFGGRTFIVRAHPHWFPEGAELEVIEELIQFVL 709
Query: 732 -ADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLAD 790
A G+ S++ +M ++ S C++SI L EM+ +L L +
Sbjct: 710 EAGEHGQASVV---QMREKAAIMMS----------CKASIKANRYLTHAEMESLLNQLRE 756
Query: 791 LNSPWNCPHGRPTMRHL--VDLTTIRKNI 817
+SP+ CPHGRP + H DL + K +
Sbjct: 757 TSSPFTCPHGRPIVIHFSGYDLEKMFKRV 785
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 46/61 (75%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR +++ + + I AG+V++ +S VKELVEN++DA ATSIEI ++E G E ++VDNG G
Sbjct: 4 IRVLDEQLANMIAAGEVVERPASVVKELVENAIDASATSIEIHVEEGGLELIRIVDNGHG 63
Query: 72 I 72
+
Sbjct: 64 M 64
>gi|149915456|ref|ZP_01903983.1| DNA mismatch repair protein [Roseobacter sp. AzwK-3b]
gi|149810745|gb|EDM70586.1| DNA mismatch repair protein [Roseobacter sp. AzwK-3b]
Length = 611
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 52/72 (72%)
Query: 8 NSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVD 67
+ P IR ++ ++RI AG+V++ +SAVKELVEN+LDAGA I++A + G+ +V D
Sbjct: 4 SQPVIRQLDDAAINRIAAGEVVERPASAVKELVENALDAGARRIDVAYADGGKTLIRVTD 63
Query: 68 NGCGISPNNFKV 79
+GCGI+P++ +
Sbjct: 64 DGCGIAPDSLAL 75
Score = 47.8 bits (112), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 82/196 (41%), Gaps = 31/196 (15%)
Query: 622 QFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQS---TVLNQQPLLRPLKLDLTPEEEV 678
Q + +I+ + + IVD HAA E+ +E+L + T + Q LL P ++++ E+
Sbjct: 428 QLHENYILAQTTDGIVIVDAHAAHERIVYEKLKRQMAETGVASQALLIPEIVEMSAEDAA 487
Query: 679 VASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVK----DLISTLADN 734
+ + + G +E G ++ P G D + D++ LAD
Sbjct: 488 SLLELAEDLARLGLVIEP----FGGGAVAVRETP----AILGACDARAMLLDILDELAD- 538
Query: 735 QGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSP 794
QG+ + + R+ A+L+ AC S+ G L EM +L +
Sbjct: 539 QGDSGSVQA------------RIEAILSRVACHGSVRSGRRLRAEEMNALLREMEATPHS 586
Query: 795 WNCPHGRPTMRHLVDL 810
C HGRPT VDL
Sbjct: 587 GQCNHGRPT---YVDL 599
>gi|421480449|ref|ZP_15928072.1| DNA mismatch repair protein [Burkholderia multivorans CF2]
gi|400221007|gb|EJO51496.1| DNA mismatch repair protein [Burkholderia multivorans CF2]
Length = 662
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 137/354 (38%), Gaps = 104/354 (29%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+P+ ++ +I AG+V++ +S VKEL+EN++DAGAT++ I L+E G + + D+GCG
Sbjct: 23 IQPLPDQLISQIAAGEVVERPASVVKELLENAMDAGATTLRIVLEEGGVKRISITDDGCG 82
Query: 72 ISPNNF----------KVRAV----------FLCQAYALIAKGVRFVCTNTTGK------ 105
I PN K+R++ F +A A IA T+ T
Sbjct: 83 IPPNELPLALMRHATSKIRSLEELEAVATLGFRGEALASIASVAEMFITSRTADAAHATR 142
Query: 106 -------------------NVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV---AICK 143
V+ + T + T FG +C+E + A+ +
Sbjct: 143 IDAQTGVLSPAAGAVGTTIEVRELYFNTPARRKFLKSEQTEFG----HCVEMIRRAALAR 198
Query: 144 SDSC--------KVEGF-LSKPGQGSGRNLGDRQYFFVNDRPVD-------------LPK 181
D VE + ++P Q + LGD F P+D LP
Sbjct: 199 PDVAISVLHNGKAVEHWNATEPAQRVAKILGDG--FATAHLPLDERAGPLAVYGCAGLPT 256
Query: 182 VS------------------KLVNELYKGA-----NSRQYPIAIMNFIVPTRACDVNVTP 218
S KL+ + A + +YP ++ +P A DVNV P
Sbjct: 257 ASRGRADQQYFFVNGRFVRDKLLTHAVRAAYEDVLHGDRYPSYVLFLDLPPEAVDVNVHP 316
Query: 219 DKRKVFFSDECSI----LHALREGLQEIYSPNNASYSVNKVEQLIEPEKSGPSS 268
K +V F D SI HA++ L + + + L EP GP+S
Sbjct: 317 SKIEVRFRDSRSIHQFVFHAVQRALARHAGASPETTAGGHAAHL-EPAPRGPAS 369
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 78/193 (40%), Gaps = 24/193 (12%)
Query: 620 IGQFNLGFIIGKLDQDLFIVDQHAADEKYNFER----LSQSTVLNQQPLLRPLKLDLTPE 675
+GQ + +++ + L IVD HAA E+ +E+ L+ TV Q LL P+ + TP
Sbjct: 476 LGQIHGIYVLAQNAHGLVIVDMHAAHERILYEQFKNALADRTVAVQS-LLLPVSMTATPV 534
Query: 676 EEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQ 735
E D + GF L L+ ++AVP +KD AD Q
Sbjct: 535 EIGTVEEERDTLEALGFDLA----VLSPTSLAIRAVP---------ALLKD-----ADLQ 576
Query: 736 GEC-SIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSP 794
++++ V R +L + AC ++ L +EM +L +
Sbjct: 577 ALARAVLADLHAFGGSRVLTERQHELLGTLACHHAVRANRRLTLDEMNALLRQMEATERA 636
Query: 795 WNCPHGRPTMRHL 807
C HGRPT L
Sbjct: 637 DQCNHGRPTWYQL 649
>gi|358335505|dbj|GAA54102.1| DNA mismatch repair protein MLH1 [Clonorchis sinensis]
Length = 871
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 60/90 (66%), Gaps = 7/90 (7%)
Query: 2 DVETPTNSPTIRPINK---GVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEY 58
D++ ++ PT RPI K V++RI AG+VI+ ++AVKEL+EN LDAG+T I+I ++
Sbjct: 18 DLQLASSPPTARPIQKLAKDVINRIAAGEVIQRPANAVKELLENCLDAGSTQIQITVRAG 77
Query: 59 GEEWFQVVDNGCGISPNNFKVRAVFLCQAY 88
G + QV DNGCGI ++ + LC+ +
Sbjct: 78 GLKLLQVQDNGCGIQVSDLPI----LCERF 103
>gi|379795663|ref|YP_005325661.1| DNA mismatch repair protein MutL [Staphylococcus aureus subsp.
aureus MSHR1132]
gi|356872653|emb|CCE58992.1| DNA mismatch repair protein MutL [Staphylococcus aureus subsp.
aureus MSHR1132]
Length = 668
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 98/192 (51%), Gaps = 23/192 (11%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADE--KYNFERLSQSTVLNQ-QPLLRPLKLDLT 673
M+++GQ + +II + + ++++DQHAA E KY + R V N+ Q LL PL +
Sbjct: 480 MEIVGQVHGTYIIAQNEFGMYMIDQHAAQERIKYEYFRDKIGEVTNEVQDLLIPLTFHFS 539
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
+E+++ + + +++ G LE G + + + P + F ++V+++I + +
Sbjct: 540 KDEQLIIDQYKNELQRVGIVLEH----FGGHDYIVSSYP----VWFPKDEVEEIIKDMIE 591
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLA-SRACRSSIMIGDALGRNEMQKILEHLADLN 792
I+ K+D ++R +A +C+ SI L +NEM +++ L +
Sbjct: 592 -----LILEEKKVDI------KKLREEVAIMMSCKKSIKANHYLQKNEMSDLIDQLREAE 640
Query: 793 SPWNCPHGRPTM 804
P+ CPHGRP +
Sbjct: 641 DPFTCPHGRPII 652
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 45/66 (68%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ + + ++I AG+V++ SS VKEL+EN++DAGAT I I ++E G + +VVDNG G
Sbjct: 4 IKELQTSLANKIAAGEVVERPSSVVKELLENAIDAGATEISIEVEESGVQSIRVVDNGSG 63
Query: 72 ISPNNF 77
I +
Sbjct: 64 IEAEDL 69
Score = 42.0 bits (97), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 74/164 (45%), Gaps = 16/164 (9%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYF 170
+L T GS + + ++GM + L ++ SD +EGF++KP ++ Y
Sbjct: 195 MLSTNGSGRTNEVMAEIYGMKVARDLVHISGDTSD-YHIEGFVAKPEHSRS----NKHYI 249
Query: 171 --FVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSD 227
F+N R + ++K + E Y + ++PI +N + DVNV P K +V S
Sbjct: 250 SIFINGRYIKNFMLNKAILEGYHTLLTIGRFPICYINIEMDPILVDVNVHPTKLEVRLSK 309
Query: 228 ECSILHALREGLQEIYS-----PNNASYSV---NKVEQLIEPEK 263
E + + +QE + P N +V NKV Q E +K
Sbjct: 310 EEQLYRLIVNKIQEAFKDRILIPKNNLDNVPKKNKVLQSFEQQK 353
>gi|193214447|ref|YP_001995646.1| DNA mismatch repair protein MutL [Chloroherpeton thalassium ATCC
35110]
gi|238692707|sp|B3QW86.1|MUTL_CHLT3 RecName: Full=DNA mismatch repair protein MutL
gi|193087924|gb|ACF13199.1| DNA mismatch repair protein MutL [Chloroherpeton thalassium ATCC
35110]
Length = 640
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 97/196 (49%), Gaps = 27/196 (13%)
Query: 615 GRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFER---LSQSTVLNQQPLLRPLKLD 671
G+ + + Q + +I+ ++ L I+DQH A E+ +ER + +S V N Q LL P
Sbjct: 451 GQERFVWQLHNTYILTQIKSGLLIIDQHVAHERILYERAIAVMESNVPNSQQLLFPHSAK 510
Query: 672 LTPEE-EVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVED--VKDLI 728
L+ E +V+ + D+++ GFSL L ++ +P + G E+ + +++
Sbjct: 511 LSAWEFDVLKEIKTDLVQL-GFSL----RILDQRTVLVEGIP--PDVMPGREERILHEML 563
Query: 729 STLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHL 788
D Q + K++ D+V S ACRSSIM G L RNEM +++ L
Sbjct: 564 EQYQDYQ------QNLKLEQRDNVA--------KSYACRSSIMAGQKLSRNEMTSLIDQL 609
Query: 789 ADLNSPWNCPHGRPTM 804
+ P+ CPHGRP +
Sbjct: 610 FATSMPYVCPHGRPII 625
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 43/55 (78%)
Query: 19 VVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGIS 73
V ++I AG+V++ +SAVKEL+EN++DAGA I +A+K G+ QV+DNGCG+S
Sbjct: 11 VANKISAGEVVQRPASAVKELLENAIDAGADEITLAIKAAGKTLIQVIDNGCGLS 65
Score = 43.5 bits (101), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Query: 143 KSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELY-KGANSRQYPIA 201
++D K+ G+L KP + ++Q+ F+N+R +S + Y + R+YP
Sbjct: 226 ENDFMKLRGYLGKPAMM--KRTKNQQFLFINNRVTQSKLLSSAIMTAYGELLGEREYPFF 283
Query: 202 IMNFIVPTRACDVNVTPDKRKVFFSDECSILHAL 235
++ + DVNV P K +V F DE +I + +
Sbjct: 284 LIYMDIAPHYIDVNVHPTKMEVKFDDERNIYNMV 317
>gi|308272776|emb|CBX29380.1| DNA mismatch repair protein mutL [uncultured Desulfobacterium sp.]
Length = 613
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 92/202 (45%), Gaps = 20/202 (9%)
Query: 606 ERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLS---QSTVLNQQ 662
E L+ K+ F + V+GQ + +II + + +F++DQHAA E+ +E++ + Q
Sbjct: 413 ENLWEKKQFKDLIVLGQLHGTYIICESVEGIFLIDQHAAHERILYEQIKAREDAYRYAIQ 472
Query: 663 PLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVE 722
LL P ++ E V + ++ GF +E G F +K+VP +
Sbjct: 473 NLLVPEVIEFGYREAGVFEKLLPDFQRAGFDVE----PFGGNAFAVKSVP----AFLSGK 524
Query: 723 DVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQ 782
DVK +I+ +N E + ++ + + +L AC +I L EM
Sbjct: 525 DVKSIITETIENLIETGFVPGFEKASDE---------LLKLIACHGAIRANQKLSDKEMI 575
Query: 783 KILEHLADLNSPWNCPHGRPTM 804
+L L D P NCPHGRPT
Sbjct: 576 TLLSQLDDCKMPSNCPHGRPTW 597
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 44/61 (72%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR +++ + ++I AG++++ +S VKELVEN+LDA +T I + +++ G+ +V DNG G
Sbjct: 11 IRILSENISNKIAAGEIVERPASVVKELVENALDAKSTRILVEIEKGGKSLIRVSDNGTG 70
Query: 72 I 72
+
Sbjct: 71 M 71
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 56/118 (47%), Gaps = 8/118 (6%)
Query: 127 VFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYF---FVNDRPVDLPKVS 183
+ G + + L + K ++ V G++S P + G Y FV+D+ V +
Sbjct: 219 ILGKDTKSSLYRLGFSK-ETISVSGWISSPVVKRHTSRGIYIYVNGRFVHDKIVQHALLE 277
Query: 184 KLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQE 241
+ L KG ++P+A++ +P DVNV P K +V FS+ + A++ ++E
Sbjct: 278 AYTSRLIKG----EFPVAVVLINLPFNEVDVNVHPAKHEVRFSEPTRVHEAVKAAVKE 331
>gi|433546743|ref|ZP_20503047.1| DNA mismatch repair protein MutL [Brevibacillus agri BAB-2500]
gi|432181963|gb|ELK39560.1| DNA mismatch repair protein MutL [Brevibacillus agri BAB-2500]
Length = 786
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 101/209 (48%), Gaps = 26/209 (12%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFE----RLSQSTVLNQQPLLRPLKLDL 672
M +GQ + +I+ + D +++VDQHAA E+ +E +L++ V +Q +L P +++
Sbjct: 595 MYPVGQVHGTYIVAQNDTGMYLVDQHAAQERIFYEYFMAKLTEEGVASQM-MLFPHTVEV 653
Query: 673 TPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTL- 731
T E + +++ G +E A G F ++A P +E +++LI +
Sbjct: 654 TAAEAARLEKRLPLLQSFGLEVE----AFGGRTFIVRAHPHWFPEGAELEVIEELIQFVL 709
Query: 732 -ADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLAD 790
A G+ S++ +M ++ S C++SI L EM+ +L L +
Sbjct: 710 EAGEHGQASVV---QMREKAAIMMS----------CKASIKANRYLTHAEMESLLNQLRE 756
Query: 791 LNSPWNCPHGRPTMRHL--VDLTTIRKNI 817
+SP+ CPHGRP + H DL + K +
Sbjct: 757 TSSPFTCPHGRPIVIHFSGYDLEKMFKRV 785
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 46/61 (75%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR +++ + + I AG+V++ +S VKELVEN++DA ATSIEI ++E G E ++VDNG G
Sbjct: 4 IRVLDEQLANMIAAGEVVERPASVVKELVENAIDASATSIEIHVEEGGLELIRIVDNGHG 63
Query: 72 I 72
+
Sbjct: 64 M 64
>gi|258645505|ref|ZP_05732974.1| putative DNA mismatch repair protein MutL [Dialister invisus DSM
15470]
gi|260402859|gb|EEW96406.1| putative DNA mismatch repair protein MutL [Dialister invisus DSM
15470]
Length = 645
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 91/189 (48%), Gaps = 25/189 (13%)
Query: 620 IGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQST-VLNQQPLLRPLKLDLTPEEEV 678
+GQ FI+ + DLFI+DQHAA E+ ++R + T + Q +L P +D+ PE+
Sbjct: 463 LGQVADCFILCQHGSDLFIIDQHAAHERVRYDRFAAKTDGIPVQAILIPYLIDVEPEDMD 522
Query: 679 VASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVP--FSKKITFGVEDVKDLISTLADNQG 736
+ + I+K G + E+ + R+ P FS+ + +KDL+ T D
Sbjct: 523 LLFEKEEEIKKLGITFEQAGRDV----IRITGAPEDFSENDMDRI--IKDLLFTFHDE-- 574
Query: 737 ECSIISSYKMDTADSVCPSRVRA-MLASRACRSSIMIGDALGRNEMQKILEHLADLNSPW 795
+ P +R M+A ACR +I GD L +M++++ L P+
Sbjct: 575 -------------NMPSPETLRHRMMAYAACRGAIKRGDPLNVRQMKELITDLFHTTRPF 621
Query: 796 NCPHGRPTM 804
CPHGRPT+
Sbjct: 622 VCPHGRPTI 630
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 76/159 (47%), Gaps = 9/159 (5%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPG--QGSGRNLGDRQ 168
V++T G+ L D I ++G+ + + V DS + G +SKP + S +N Q
Sbjct: 196 VIETPGNGRLMDVISALYGVKVTGEMLEVESEGEDSV-MTGMISKPSLLKSSRQN----Q 250
Query: 169 YFFVNDRPVDLPKVSKLVNELYKGANSRQ-YPIAIMNFIVPTRACDVNVTPDKRKVFFSD 227
+N R V+ V+K V+ Y + YPI ++ F +P + DVNV P KR++ F D
Sbjct: 251 TIIINRRVVESAVVTKAVDNAYHSLLPKNGYPIMVLTFTLPPESIDVNVHPQKREIKFDD 310
Query: 228 ECSILHALREGLQEIYSPNNASYSVNKVEQLIEPEKSGP 266
E I + + + +A S+ K + + EP P
Sbjct: 311 EQKIFRLVYHAVLNTLTSQSAPDSIVK-DMIKEPAHQVP 348
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 48/79 (60%)
Query: 22 RICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFKVRA 81
+I AG+V++ +AVKELVENS+DAGA IE+ + + G + +V D+G G++ + K+
Sbjct: 14 QIAAGEVVERPVNAVKELVENSIDAGAHMIEVEIADGGMTYIRVTDDGSGMTREDAKLSV 73
Query: 82 VFLCQAYALIAKGVRFVCT 100
+ + + + +C+
Sbjct: 74 IRHATSKISSVENIYHICS 92
>gi|147677677|ref|YP_001211892.1| DNA mismatch repair protein [Pelotomaculum thermopropionicum SI]
gi|189030403|sp|A5D2K5.1|MUTL_PELTS RecName: Full=DNA mismatch repair protein MutL
gi|146273774|dbj|BAF59523.1| DNA mismatch repair enzyme [Pelotomaculum thermopropionicum SI]
Length = 605
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 80/192 (41%), Gaps = 18/192 (9%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFER-LSQSTVLNQQPLLRPLKLDLTPE 675
+ + F +I+ + L+IVDQHAA E+ +E LS Q LL P+ L+L
Sbjct: 420 LNALAHFPPVYILAGGEDGLYIVDQHAAHERIIYEEILSSGRTRPSQYLLVPVMLELDYR 479
Query: 676 EEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQ 735
E + + GF +E G F L+ VPF E + DL+
Sbjct: 480 EASILIERIIWFTDAGFVIEH----FGGNTFLLRGVPFELPAGQEREIILDLLDYFESKG 535
Query: 736 GECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPW 795
+ +K A S ACRS++ G+ L M +L+ L+ SP+
Sbjct: 536 TGAGMTDFFKWAAA-------------SIACRSAVRAGEKLSLPSMNALLQRLSGTASPY 582
Query: 796 NCPHGRPTMRHL 807
CPHGRP + L
Sbjct: 583 TCPHGRPVVIKL 594
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 38/56 (67%)
Query: 22 RICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNF 77
+I AG+V++ S VKELVENS+DAGA I + L+ G + V+D+GCG+S +
Sbjct: 14 QIAAGEVVERPVSVVKELVENSIDAGAGRIVVELEGGGLQAISVLDDGCGMSEEDL 69
Score = 43.5 bits (101), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 6/120 (5%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAI-CKSDSCKVEGFLSKPGQGSGRNLGDRQY 169
V + GS +L D++ V+G I E +A+ ++ + G+L KP R+
Sbjct: 196 VFYSPGSGNLIDSLAAVYGRQI--AAEMIAVKAVAEGLSINGYLGKPSLS--RSTRSHIT 251
Query: 170 FFVNDRPVDLPKVSKLVNELYKGANSR-QYPIAIMNFIVPTRACDVNVTPDKRKVFFSDE 228
+N R V P +++ + Y SR + P+A+++ V DVN+ P K +V +E
Sbjct: 252 VIINGRYVRCPAIAEAIEGAYGTLLSRGRRPVAVLSLSVSPELLDVNIHPAKLEVRLLEE 311
>gi|21674838|ref|NP_662903.1| DNA mismatch repair protein MutL [Chlorobium tepidum TLS]
gi|25090732|sp|Q8KAX3.1|MUTL_CHLTE RecName: Full=DNA mismatch repair protein MutL
gi|21648059|gb|AAM73245.1| DNA mismatch repair protein MutL [Chlorobium tepidum TLS]
Length = 624
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 89/191 (46%), Gaps = 21/191 (10%)
Query: 620 IGQFNLGFIIGKLDQDLFIVDQHAADEKYNFER---LSQSTVLNQQPLLRPLKLDLTPEE 676
I Q + +II ++ L I+DQH A E+ +ER + N Q LL P K+DL P +
Sbjct: 440 IWQLHNKYIICQIKTGLMIIDQHVAHERVLYERAIDIMNEAAPNSQQLLFPQKIDLKPWQ 499
Query: 677 EVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQG 736
V D + + GF++ G+ ++ VP + ++D+I+ +N
Sbjct: 500 YEVFEEISDELYRLGFNI----RPFGGMSVMIEGVPPDVRDGAEATILQDMIAEYQENAA 555
Query: 737 ECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWN 796
+ K++ D++ S +CR++IM G L EM+ +++ L P+
Sbjct: 556 KL------KLEKRDNLA--------KSYSCRNAIMTGQKLSVEEMRMLIDRLFATRMPYV 601
Query: 797 CPHGRPTMRHL 807
CPHGRP + L
Sbjct: 602 CPHGRPVIIRL 612
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 44/58 (75%)
Query: 19 VVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNN 76
V ++I AG+V++ +S VKEL+ENS+DAGA+ I + +K+ G + Q++DNGCG+ ++
Sbjct: 11 VANKISAGEVVQRPASVVKELIENSIDAGASRITVIIKDAGRQLVQIIDNGCGMESDD 68
Score = 46.2 bits (108), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 143 KSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELY-KGANSRQYPIA 201
++D + G+L KPG + QYFF+N R + + + V + Y + RQ P A
Sbjct: 226 ENDYMTIGGYLGKPGMMVRQKYD--QYFFINRRLIQNRMLVQAVQQAYGELLEERQSPFA 283
Query: 202 IMNFIVPTRACDVNVTPDKRKVFFSDECSI 231
++ + DVNV P K +V F DE SI
Sbjct: 284 LLFLGLDPSLVDVNVHPAKLEVRFEDEKSI 313
>gi|161525790|ref|YP_001580802.1| DNA mismatch repair protein [Burkholderia multivorans ATCC 17616]
gi|189349489|ref|YP_001945117.1| DNA mismatch repair protein [Burkholderia multivorans ATCC 17616]
gi|160343219|gb|ABX16305.1| DNA mismatch repair protein MutL [Burkholderia multivorans ATCC
17616]
gi|189333511|dbj|BAG42581.1| DNA mismatch repair protein [Burkholderia multivorans ATCC 17616]
Length = 662
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 137/354 (38%), Gaps = 104/354 (29%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+P+ ++ +I AG+V++ +S VKEL+EN++DAGAT++ I L+E G + + D+GCG
Sbjct: 23 IQPLPDQLISQIAAGEVVERPASVVKELLENAMDAGATTLRIVLEEGGVKRISITDDGCG 82
Query: 72 ISPNNF----------KVRAV----------FLCQAYALIAKGVRFVCTNTTGK------ 105
I PN K+R++ F +A A IA T+ T
Sbjct: 83 IPPNELPLALMRHATSKIRSLEELEAVATLGFRGEALASIASVAEMYITSRTADAAHATR 142
Query: 106 -------------------NVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV---AICK 143
V+ + T + T FG +C+E + A+ +
Sbjct: 143 IDAQTGVLSPAAGAVGTTIEVRELYFNTPARRKFLKSEQTEFG----HCVEMIRRAALAR 198
Query: 144 SDSC--------KVEGF-LSKPGQGSGRNLGDRQYFFVNDRPVD-------------LPK 181
D VE + ++P Q + LGD F P+D LP
Sbjct: 199 PDVAISVLHNGKAVEHWNATEPAQRVAKILGDG--FATAHLPLDERAGPLAVYGCAGLPT 256
Query: 182 VS------------------KLVNELYKGA-----NSRQYPIAIMNFIVPTRACDVNVTP 218
S KL+ + A + +YP ++ +P A DVNV P
Sbjct: 257 ASRGRADQQYFFVNGRFVRDKLLTHAVRAAYEDVLHGDRYPSYVLFLDLPPEAVDVNVHP 316
Query: 219 DKRKVFFSDECSI----LHALREGLQEIYSPNNASYSVNKVEQLIEPEKSGPSS 268
K +V F D SI HA++ L + + + L EP GP+S
Sbjct: 317 SKIEVRFRDSRSIHQFVFHAVQRALARHAGASPETTAGGHAAHL-EPAPRGPAS 369
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 78/193 (40%), Gaps = 24/193 (12%)
Query: 620 IGQFNLGFIIGKLDQDLFIVDQHAADEKYNFER----LSQSTVLNQQPLLRPLKLDLTPE 675
+GQ + +++ + L IVD HAA E+ +E+ L+ TV Q LL P+ + TP
Sbjct: 476 LGQIHGIYVLAQNAHGLVIVDMHAAHERILYEQFKNALADRTVAVQS-LLLPVSMTATPV 534
Query: 676 EEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQ 735
E D + GF L L+ ++AVP +KD AD Q
Sbjct: 535 EIGTVEEERDTLEALGFDLA----VLSPTSLAIRAVP---------ALLKD-----ADLQ 576
Query: 736 GEC-SIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSP 794
++++ V R +L + AC ++ L +EM +L +
Sbjct: 577 ALARAVLADLHAFGGSRVLTERQHELLGTLACHHAVRANRRLTLDEMNALLRQMEATERA 636
Query: 795 WNCPHGRPTMRHL 807
C HGRPT L
Sbjct: 637 DQCNHGRPTWYQL 649
>gi|206900128|ref|YP_002250800.1| DNA mismatch repair protein MutL [Dictyoglomus thermophilum H-6-12]
gi|238058931|sp|B5YE42.1|MUTL_DICT6 RecName: Full=DNA mismatch repair protein MutL
gi|206739231|gb|ACI18289.1| DNA mismatch repair protein MutL [Dictyoglomus thermophilum H-6-12]
Length = 575
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 96/194 (49%), Gaps = 21/194 (10%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQST---VLNQQPLLRPLKLDLT 673
+++GQ +II + ++I+DQHAA E+ +E L + + +L P+ ++++
Sbjct: 388 FRIVGQIFDNYIILETKDKVYIIDQHAAHERIKYEELKEELNLGYIQNVEILFPVVIEVS 447
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
EE+++ + D++ + FS E+ R+ VP+ + + F + +++L
Sbjct: 448 EEEKILLDKYKDLLERFAFSWED----FGPYHIRIVKVPY-EFLNFDSKSIENLFR---- 498
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNS 793
IIS D ++ ++ S AC S++ G+ L R EM+ +++ + + N
Sbjct: 499 -----EIIS----DISEKDLSKLEDKIIKSMACHSAVRSGNILIREEMEMLIKLIFEKNI 549
Query: 794 PWNCPHGRPTMRHL 807
P CPHGRP + +
Sbjct: 550 PLTCPHGRPYIWEI 563
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 65/133 (48%), Gaps = 8/133 (6%)
Query: 114 TQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVN 173
T G L++ I +F + + L + D C +EGF+SKPG+ L + YF+VN
Sbjct: 198 TPGDGDLENLISLLFDIRVQESLISFQKREGDYC-IEGFVSKPGKLIA--LKSQDYFYVN 254
Query: 174 DRPVDLPKVSKLVNELYKGANSRQY-PIAIMNFIVPTRACDVNVTPDKRKVFFSDECS-- 230
R V + + + E YKG Y P +I+ VP DVNV P KR+V F E
Sbjct: 255 RRWVRNNTILQAIREGYKGRILDGYFPFSIIFLTVPYSEVDVNVHPTKREVKFQKEKEVY 314
Query: 231 --ILHALREGLQE 241
+ ++RE L E
Sbjct: 315 EFVFRSIREALDE 327
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 36/53 (67%)
Query: 21 HRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGIS 73
++I AG+V++ S VKELVENS+DAGAT I + GE V+D+G G++
Sbjct: 13 NKIAAGEVVERPVSVVKELVENSIDAGATRIIVEFANGGETLISVIDDGEGMT 65
>gi|281417498|ref|ZP_06248518.1| DNA mismatch repair protein MutL [Clostridium thermocellum JW20]
gi|281408900|gb|EFB39158.1| DNA mismatch repair protein MutL [Clostridium thermocellum JW20]
Length = 761
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 89/194 (45%), Gaps = 21/194 (10%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQ---QPLLRPLKL 670
F ++IGQ +I+ + + DL I+DQHAA E+ FE L + N+ Q LL P+ +
Sbjct: 570 FLDARIIGQVFSTYILLQNEDDLIIIDQHAAHERIRFEELKEKYARNESLAQYLLTPVVI 629
Query: 671 DLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIST 730
+LT +E V ++ K GF E + L++VP + GV VK+
Sbjct: 630 ELTNQEIVFLEEEKELFNKLGFIFE----SFGNNSIILRSVPIPDE---GV-GVKEAFLE 681
Query: 731 LADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLAD 790
+ D + M L AC+S++ L E++ IL+ L
Sbjct: 682 VVD----------FLMSKGRKYDKIIEEDALYQIACKSAVKANKKLDEIEIKAILDKLNM 731
Query: 791 LNSPWNCPHGRPTM 804
L +P+ CPHGRPT+
Sbjct: 732 LQNPYTCPHGRPTV 745
Score = 58.2 bits (139), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 46/65 (70%)
Query: 15 INKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISP 74
+++ ++I AG+V++ +S VKELVENS+DAG+T+I + + G + +VVDNG GI
Sbjct: 7 LDENTANQIAAGEVVERPASVVKELVENSIDAGSTNISVEINNGGISFIKVVDNGSGIEE 66
Query: 75 NNFKV 79
++ ++
Sbjct: 67 DDIEI 71
>gi|448315308|ref|ZP_21504957.1| DNA mismatch repair protein MutL [Natronococcus jeotgali DSM 18795]
gi|445611846|gb|ELY65589.1| DNA mismatch repair protein MutL [Natronococcus jeotgali DSM 18795]
Length = 721
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 93/196 (47%), Gaps = 18/196 (9%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLN--QQPLLRPLKLDLTP 674
++V+GQ+ +++ + L +VDQHAADE+ N+ERL ++ + Q L P++L+LT
Sbjct: 525 LRVLGQYADTYLVCEAPDGLVLVDQHAADERVNYERLREAFADDPAAQSLASPVELELTA 584
Query: 675 EEEVVASMHMDIIRKNGFSLEE-DPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
E + + + + GF D +A + VP + T ++D++++ +
Sbjct: 585 AEAEAFESYREALARLGFHANRVDDRTVA-----VTTVPAVLEETLEPPRLRDVLTSFVE 639
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNS 793
E +T D++ L AC SI +L + +L L D +
Sbjct: 640 GDREAG------AETIDALADE----FLGDLACHPSITGNTSLTEGSVVDLLSALDDCEN 689
Query: 794 PWNCPHGRPTMRHLVD 809
P+NCPHGRP + L D
Sbjct: 690 PYNCPHGRPVIVRLED 705
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 48/68 (70%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR +++ V RI AG+V++ +SAVKELVENSLDAGA S+++ +++ G E +V D+G G
Sbjct: 12 IRRLDEDTVARIAAGEVVERPASAVKELVENSLDAGADSVDVTVEDGGTELIRVADDGDG 71
Query: 72 ISPNNFKV 79
+ + +
Sbjct: 72 MGEADLRA 79
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 70/177 (39%), Gaps = 26/177 (14%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKV------EGFLSKPGQGSGRNL 164
V T G L+ ++ V+G + + + PV D V G +S P N
Sbjct: 206 VFATTGQGDLQAAVLAVYGREVASSMIPVE-ADGDELPVGPVESITGLVSHPET----NR 260
Query: 165 GDRQYF--FVNDRPVDLPKVSKLVNELYKGA-NSRQYPIAIMNFIVPTRACDVNVTPDKR 221
R+Y +VN R V V + + Y +YP + VP A DVNV P KR
Sbjct: 261 SSREYLATYVNGRAVSADAVREGIMGAYGTQLGGDRYPFVALFLEVPGDAVDVNVHPRKR 320
Query: 222 KVFFSDECSILHA---------LREGLQEIYSPNNASYSVNKVEQLIEPEKSGPSSG 269
+V F D+ ++ L GL +P S E +EP +G S+G
Sbjct: 321 EVRFGDDDAVRRQVDSAVESALLEHGLLRSRAPRGRSA---PEETRLEPGGNGGSTG 374
>gi|256003774|ref|ZP_05428762.1| DNA mismatch repair protein MutL [Clostridium thermocellum DSM
2360]
gi|385778794|ref|YP_005687959.1| DNA mismatch repair protein MutL [Clostridium thermocellum DSM
1313]
gi|419723189|ref|ZP_14250324.1| DNA mismatch repair protein mutL [Clostridium thermocellum AD2]
gi|419724907|ref|ZP_14251962.1| DNA mismatch repair protein mutL [Clostridium thermocellum YS]
gi|255992335|gb|EEU02429.1| DNA mismatch repair protein MutL [Clostridium thermocellum DSM
2360]
gi|316940474|gb|ADU74508.1| DNA mismatch repair protein MutL [Clostridium thermocellum DSM
1313]
gi|380771527|gb|EIC05392.1| DNA mismatch repair protein mutL [Clostridium thermocellum YS]
gi|380780956|gb|EIC10619.1| DNA mismatch repair protein mutL [Clostridium thermocellum AD2]
Length = 755
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 89/194 (45%), Gaps = 21/194 (10%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQ---QPLLRPLKL 670
F ++IGQ +I+ + + DL I+DQHAA E+ FE L + N+ Q LL P+ +
Sbjct: 564 FLDARIIGQVFSTYILLQNEDDLIIIDQHAAHERIRFEELKEKYARNESLAQYLLTPVVI 623
Query: 671 DLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIST 730
+LT +E V ++ K GF E + L++VP + GV VK+
Sbjct: 624 ELTNQEIVFLEEEKELFNKLGFIFE----SFGNNSIILRSVPIPDE---GV-GVKEAFLE 675
Query: 731 LADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLAD 790
+ D + M L AC+S++ L E++ IL+ L
Sbjct: 676 VVD----------FLMSKGRKYDKIIEEDALYQIACKSAVKANKKLDEIEIKAILDKLNM 725
Query: 791 LNSPWNCPHGRPTM 804
L +P+ CPHGRPT+
Sbjct: 726 LQNPYTCPHGRPTV 739
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 46/65 (70%)
Query: 15 INKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISP 74
+++ ++I AG+V++ +S VKELVENS+DAG+T+I + + G + +VVDNG GI
Sbjct: 7 LDENTANQIAAGEVVERPASVVKELVENSIDAGSTNISVEINNGGISFIKVVDNGSGIEE 66
Query: 75 NNFKV 79
++ ++
Sbjct: 67 DDIEI 71
>gi|269316183|ref|XP_638891.4| MutL DNA mismatch repair protein [Dictyostelium discoideum AX4]
gi|256012918|gb|EAL65556.2| MutL DNA mismatch repair protein [Dictyostelium discoideum AX4]
Length = 1658
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 90/203 (44%), Gaps = 21/203 (10%)
Query: 611 KEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQ----PLLR 666
KE K I Q++ F+I + D + I+DQHA E+ E L + + P+
Sbjct: 1461 KEMLQNFKFITQWDNKFLICEADGIVLILDQHAVSERIKLEILERKYFGENKFDLCPMPE 1520
Query: 667 PLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKD 726
+ LT E + ++ + + GF + VP + GV D+++
Sbjct: 1521 RTRWSLTEYELELMRIYTKPLEQWGFKW-----TFNKTSINISQVPMFCLVGLGVNDLRE 1575
Query: 727 LISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILE 786
+ L ++G A S P +LAS+ACR++I G+ L R K+LE
Sbjct: 1576 FLYQLESSKG------------ATSNRPPAAHRILASKACRTAIKFGNKLSREICIKLLE 1623
Query: 787 HLADLNSPWNCPHGRPTMRHLVD 809
L + N P+ C HGRP++ L++
Sbjct: 1624 DLNECNIPFQCAHGRPSIIPLIN 1646
>gi|196233474|ref|ZP_03132317.1| DNA mismatch repair protein MutL [Chthoniobacter flavus Ellin428]
gi|196222470|gb|EDY16997.1| DNA mismatch repair protein MutL [Chthoniobacter flavus Ellin428]
Length = 627
Score = 75.5 bits (184), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 91/196 (46%), Gaps = 23/196 (11%)
Query: 612 EDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERL---SQSTVLNQQPLLRPL 668
+DF + V+G+ +++ + L +VDQHAA E+ FE + +S + Q LL PL
Sbjct: 436 QDFKILGVLGKL---YVLMENATGLVLVDQHAAHERILFEEMLKRMESQGVPTQRLLLPL 492
Query: 669 KLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLI 728
L ++P + + H+D++ + G LE PF TF ++ + +
Sbjct: 493 TLQVSPRDADWITHHLDVLNRAGIGLE----------------PFGAG-TFKIDSLPTFL 535
Query: 729 STLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHL 788
+Q II + +A + M+A CR ++ D L E+ ++++ L
Sbjct: 536 RGSEPSQLLREIIDDLRETSAQTSKLRLGEHMIAKTVCRHAVKANDVLREPELVRLIQDL 595
Query: 789 ADLNSPWNCPHGRPTM 804
+ P+ CPHGRPTM
Sbjct: 596 LACDLPYCCPHGRPTM 611
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 42/58 (72%)
Query: 15 INKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGI 72
+++ V ++ AG+V++ +S VKELVENS+DAGA IE+A++ G +VVD+G G+
Sbjct: 7 LSEQVASQVAAGEVVERPASVVKELVENSIDAGAKKIEVAIRRGGISSIRVVDDGFGM 64
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 71/149 (47%), Gaps = 3/149 (2%)
Query: 106 NVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLG 165
N + VV + ++ L++ I + G + L V +D+ ++ GF+ K G R+
Sbjct: 191 NDERVVYQLPPTTHLRERIRDLCGAALAAELLEVPEFAADNIRIRGFVGK--AGVSRSSR 248
Query: 166 DRQYFFVNDRPVDLPKVSKLVNELYKGANSR-QYPIAIMNFIVPTRACDVNVTPDKRKVF 224
+Q F+N R V+ ++ + E Y A + Q+P+ + + A DVNV P KR+V
Sbjct: 249 AQQLIFLNGRAVENSTLNFALREGYHTALMKGQHPVTFLFIDMDPAAVDVNVHPAKREVR 308
Query: 225 FSDECSILHALREGLQEIYSPNNASYSVN 253
F + I A+ E ++ + A +S
Sbjct: 309 FRNSAEIREAIVEAIRRTLETDRAEWSAT 337
>gi|320583166|gb|EFW97382.1| hypothetical protein HPODL_1160 [Ogataea parapolymorpha DL-1]
Length = 652
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 52/72 (72%)
Query: 8 NSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVD 67
+P IRP+ + VV+RI AG+++ SA+KEL+ENS+DA ATSI++A KE G + Q+ D
Sbjct: 2 TTPRIRPLEEAVVNRIAAGEIVLAPYSALKELLENSIDAQATSIDVACKEGGLKLLQITD 61
Query: 68 NGCGISPNNFKV 79
NG GI+ ++ +
Sbjct: 62 NGVGIAKDDLAI 73
>gi|119385437|ref|YP_916493.1| DNA mismatch repair protein [Paracoccus denitrificans PD1222]
gi|119375204|gb|ABL70797.1| DNA mismatch repair protein MutL [Paracoccus denitrificans
PD1222]
Length = 606
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 53/77 (68%)
Query: 1 MDVETPTNSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGE 60
M+ P P IR +++ +RI AG+V++ +SAVKELVEN+LDAGA+ IE+A+ + G+
Sbjct: 1 MNTHAPKMRPIIRQLDEAAANRIAAGEVVERPASAVKELVENALDAGASRIEVAIAKGGK 60
Query: 61 EWFQVVDNGCGISPNNF 77
+V D+GCG++ +
Sbjct: 61 ALIRVSDDGCGMTAEDL 77
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 81/198 (40%), Gaps = 38/198 (19%)
Query: 622 QFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQ---STVLNQQPLLRPLKLDLTPEEEV 678
Q + +I+ + + IVDQHAA E+ +ERL +T + Q LL P ++L+
Sbjct: 424 QLHENWIVAQTADGIVIVDQHAAHERLVYERLKAQLDATGIASQALLIPEIVELS----- 478
Query: 679 VASMHMDIIRKNGFSLEEDPHALAGLRFRLKAV-----PFSKKITFGVEDVKDLISTLAD 733
E D H + + L A+ PF V +V LI L
Sbjct: 479 ----------------EADAHRILAIAGELAALGLVIEPFGGG-AVAVREVPALIQRL-- 519
Query: 734 NQGECSIISSYKMDTADSVCPSRVRA----MLASRACRSSIMIGDALGRNEMQKILEHLA 789
++I D AD R+RA +L+S AC S+ G + +EM +L +
Sbjct: 520 --NAAALIRDILDDLADQGASDRLRARVDAVLSSMACHGSVRSGRRMSADEMNALLREME 577
Query: 790 DLNSPWNCPHGRPTMRHL 807
+ C HGRPT L
Sbjct: 578 RVPKSGQCNHGRPTWIEL 595
>gi|125973294|ref|YP_001037204.1| DNA mismatch repair protein MutL [Clostridium thermocellum ATCC
27405]
gi|125713519|gb|ABN52011.1| DNA mismatch repair protein MutL [Clostridium thermocellum ATCC
27405]
Length = 755
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 89/194 (45%), Gaps = 21/194 (10%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQ---QPLLRPLKL 670
F ++IGQ +I+ + + DL I+DQHAA E+ FE L + N+ Q LL P+ +
Sbjct: 564 FLDARIIGQVFSTYILLQNEDDLIIIDQHAAHERIRFEELKEKYARNESLAQYLLTPVVI 623
Query: 671 DLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIST 730
+LT +E V ++ K GF E + L++VP + GV VK+
Sbjct: 624 ELTNQEIVFLEEEKELFNKLGFIFE----SFGNNSIILRSVPIPDE---GV-GVKEAFLE 675
Query: 731 LADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLAD 790
+ D + M L AC+S++ L E++ IL+ L
Sbjct: 676 VVD----------FLMSKGRKYDKIIEEDALYQIACKSAVKANKKLDEIEIKAILDKLNM 725
Query: 791 LNSPWNCPHGRPTM 804
L +P+ CPHGRPT+
Sbjct: 726 LQNPYTCPHGRPTV 739
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 46/65 (70%)
Query: 15 INKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISP 74
+++ ++I AG+V++ +S VKELVENS+DAG+T+I + + G + +VVDNG GI
Sbjct: 7 LDENTANQIAAGEVVERPASVVKELVENSIDAGSTNISVEINNGGISFIKVVDNGSGIEE 66
Query: 75 NNFKV 79
++ ++
Sbjct: 67 DDIEI 71
>gi|288556898|ref|YP_003428833.1| DNA mismatch repair protein [Bacillus pseudofirmus OF4]
gi|288548058|gb|ADC51941.1| DNA mismatch repair protein [Bacillus pseudofirmus OF4]
Length = 658
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 98/197 (49%), Gaps = 27/197 (13%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADE--KYNFERLSQSTVLNQ-QPLLRPLKLDLT 673
M +GQ + +I+ + + ++++DQHAA E KY + R V + Q LL P+ ++ T
Sbjct: 470 MYPVGQMHGTYIVAQNENGMYLIDQHAAQERIKYEYYREKVGEVPRETQELLVPMTIECT 529
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
+E ++ H+D +++ G LEE + +++ P E ++++I L
Sbjct: 530 NQEAIIIDQHLDDLKQVGVFLEE----FGSKTYIVRSHPVWLPKGLEEETIREIIDHL-- 583
Query: 734 NQGECSIISSYKMDTADSVCPSRVR---AMLASRACRSSIMIGDALGRNEMQKILEHLAD 790
+++ K+D R+R A+L S C++SI L ++EM +LE L
Sbjct: 584 -------LTTAKIDI------KRLREDAAILMS--CKASIKANRHLRQDEMFALLESLRK 628
Query: 791 LNSPWNCPHGRPTMRHL 807
+ P+ CPHGRP + H
Sbjct: 629 SSDPFTCPHGRPILIHF 645
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 45/70 (64%), Gaps = 2/70 (2%)
Query: 22 RICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFKVRA 81
+I AG+V++ +S VKEL+EN+LDA +T+I I ++E G +++DNG GI ++ V
Sbjct: 14 KIAAGEVVERPASIVKELLENALDAHSTNILIEMEEGGMSSIRILDNGDGIQADD--VET 71
Query: 82 VFLCQAYALI 91
F A + I
Sbjct: 72 AFYRHATSKI 81
Score = 44.7 bits (104), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 65/137 (47%), Gaps = 8/137 (5%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQY- 169
+LKT G+ ++ I +++G N+ + V+ D +EG+++KP RQY
Sbjct: 195 MLKTTGNKDVRQVIASIYGRNVAKEMVAVSGTSLDYS-IEGYIAKPEV----TRASRQYM 249
Query: 170 -FFVNDRPVDLPKVSKLVNE-LYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSD 227
F+N R + +++ V E + +YP+ +++ + DVNV P K +V S
Sbjct: 250 SLFINGRYIRNFHLARAVQEGFHTLLPIGRYPVVVLSIEMDPTLIDVNVHPSKLEVRLSK 309
Query: 228 ECSILHALREGLQEIYS 244
E + + +Q ++
Sbjct: 310 EDELAKLITSSIQSAFN 326
>gi|299740046|ref|XP_001840436.2| DNA binding protein [Coprinopsis cinerea okayama7#130]
gi|298404060|gb|EAU81492.2| DNA binding protein [Coprinopsis cinerea okayama7#130]
Length = 778
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 55/76 (72%)
Query: 6 PTNSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQV 65
PT I+ ++K +++RI AG++I +SA+KEL+ENSLDAG+TSI++ +K+ G + Q+
Sbjct: 5 PTEPRPIKKLDKTLINRIAAGEIIHRPASALKELIENSLDAGSTSIKVTVKDGGLKLLQI 64
Query: 66 VDNGCGISPNNFKVRA 81
DNGCGI ++ + A
Sbjct: 65 QDNGCGIRKSDLPILA 80
>gi|193213544|ref|YP_001999497.1| DNA mismatch repair protein MutL [Chlorobaculum parvum NCIB 8327]
gi|238692607|sp|B3QL59.1|MUTL_CHLP8 RecName: Full=DNA mismatch repair protein MutL
gi|193087021|gb|ACF12297.1| DNA mismatch repair protein MutL [Chlorobaculum parvum NCIB 8327]
Length = 626
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 90/191 (47%), Gaps = 21/191 (10%)
Query: 620 IGQFNLGFIIGKLDQDLFIVDQHAADEKYNFER---LSQSTVLNQQPLLRPLKLDLTPEE 676
I Q + +II ++ L I+DQH A E+ +ER + V N Q LL P K+DL P +
Sbjct: 442 IWQLHNKYIICQIKTGLMIIDQHVAHERVLYERAIDVMNEAVPNSQQLLFPQKIDLKPWQ 501
Query: 677 EVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQG 736
V + + + GF++ GL ++ VP + ++D+I+ +N
Sbjct: 502 YEVYEEISEELYRLGFTI----RPFGGLSVMIEGVPPDVRDGNEATILQDMIAEYQENA- 556
Query: 737 ECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWN 796
S K++ D++ S +CR++IM G L +M+ +++ L P+
Sbjct: 557 -----SKLKLEKRDNLA--------KSYSCRNAIMTGQKLDVEQMRMLIDRLFATRMPYV 603
Query: 797 CPHGRPTMRHL 807
CPHGRP + L
Sbjct: 604 CPHGRPVIIRL 614
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 47/63 (74%)
Query: 10 PTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNG 69
P+I + V ++I AG+V++ +S VKEL+ENS+D+GA++I + +KE G + +++DNG
Sbjct: 2 PSIAKLPDIVANKISAGEVVQRPASVVKELLENSIDSGASAITVVIKEAGRQLVRIIDNG 61
Query: 70 CGI 72
CG+
Sbjct: 62 CGM 64
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 143 KSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELY-KGANSRQYPIA 201
++D + G+L KPG + QYF++N R + + + V + Y + RQ P A
Sbjct: 226 ENDYMTIGGYLGKPGMMVRQKYD--QYFYINRRLIQNRMLVQAVQQAYAELLEERQSPFA 283
Query: 202 IMNFIVPTRACDVNVTPDKRKVFFSDECSI 231
++ + DVNV P K +V F DE SI
Sbjct: 284 LLFLGLDPSLVDVNVHPAKLEVKFEDEKSI 313
>gi|156229812|gb|AAI52496.1| Zp3a.2 protein [Danio rerio]
Length = 817
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 94/199 (47%), Gaps = 21/199 (10%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGM-NIYNCLEPVAIC 142
L AYA+I +R ++ K+VV + S + ++ V G ++ N L
Sbjct: 175 LLMAYAVIKPELRVTLSHN-----KAVVWQKSRVSDHRTALMAVLGAASVANMLPIQHHQ 229
Query: 143 KSDSCKVEGFLSKPGQG---SGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANS---- 195
+ ++GF KPG + + D+ + FVN RPV ++ KL+ + Y A S
Sbjct: 230 EQPEITIDGFFPKPGSDLNSTSSSTTDKSFIFVNSRPVHHKEILKLIKQYYTSAQSNSES 289
Query: 196 --RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASYSV- 252
R+YP +MN +P DVN+TPDK +V ++ +L ++ L +Y +N ++
Sbjct: 290 VSRRYPTFMMNITIPASTVDVNLTPDKTEVMLQNKDEVLLSVETMLISLYGYSNGEENLK 349
Query: 253 -----NKVEQLIEPEKSGP 266
+ V L EP+++ P
Sbjct: 350 TAGNPSDVTSLDEPKRTSP 368
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 43/63 (68%)
Query: 20 VHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFKV 79
V +C+ QVI + + VKEL+ENSLDAG++S+E+ L+ YG + +V DNG GI + V
Sbjct: 9 VRLLCSSQVITSVLNVVKELIENSLDAGSSSLEVKLENYGLDRIEVRDNGSGIKATDVSV 68
Query: 80 RAV 82
AV
Sbjct: 69 MAV 71
>gi|403046768|ref|ZP_10902237.1| DNA mismatch repair protein [Staphylococcus sp. OJ82]
gi|402763464|gb|EJX17557.1| DNA mismatch repair protein [Staphylococcus sp. OJ82]
Length = 649
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 90/192 (46%), Gaps = 23/192 (11%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADE--KYNFERLSQSTVLNQ-QPLLRPLKLDLT 673
M+V+GQ + +II + + +F++DQHAA E KY + R V N+ Q LL PL +
Sbjct: 461 MEVVGQVHGTYIIAQNENGMFMIDQHAAQERIKYEYFREKIGDVSNEIQNLLIPLTFHFS 520
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
+E ++ + H++ + K G LE G + + + P E +KD+I + +
Sbjct: 521 KDELMIINQHVEELDKVGVHLE----PFGGNDYIVDSYPVWFPAAEAEEIIKDMIEYVLE 576
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLA-SRACRSSIMIGDALGRNEMQKILEHLADLN 792
++ V ++R A +C+ SI L NEM ++ L +
Sbjct: 577 HK---------------KVNVKKIREEAAIMMSCKKSIKANHYLKNNEMADLVNQLRETE 621
Query: 793 SPWNCPHGRPTM 804
P+ CPHGRP +
Sbjct: 622 DPFTCPHGRPII 633
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 41/61 (67%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ + + ++I AG+V++ S VKEL+EN++DA AT I I +++ G +VVDNG G
Sbjct: 4 IKELQTSLANKIAAGEVVERPGSVVKELLENAIDAQATEINIEVEQSGVASIRVVDNGTG 63
Query: 72 I 72
I
Sbjct: 64 I 64
Score = 43.9 bits (102), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 8/136 (5%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYF 170
+LKT GS + + ++GM + L + SD ++EG+++KP ++ Y
Sbjct: 195 ILKTNGSGRTNEVMAEIYGMKVAKDLVHITGETSD-YRLEGYVAKPEHSRS----NKHYI 249
Query: 171 --FVNDRPVDLPKVSKLVNELYKGA-NSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSD 227
F+N R + ++K + E Y ++PI +N + DVNV P K +V S
Sbjct: 250 SIFINGRYIKNFLINKAILEGYHTLLMVGRFPICYINIEMDPILVDVNVHPTKLEVRLSK 309
Query: 228 ECSILHALREGLQEIY 243
E + + E ++E +
Sbjct: 310 EDQLFELIVEKIREAF 325
>gi|392971906|ref|ZP_10337298.1| DNA mismatch repair protein MutL [Staphylococcus equorum subsp.
equorum Mu2]
gi|392509619|emb|CCI60590.1| DNA mismatch repair protein MutL [Staphylococcus equorum subsp.
equorum Mu2]
Length = 649
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 90/192 (46%), Gaps = 23/192 (11%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADE--KYNFERLSQSTVLNQ-QPLLRPLKLDLT 673
M+V+GQ + +II + + +F++DQHAA E KY + R V N+ Q LL PL +
Sbjct: 461 MEVVGQVHGTYIIAQNENGMFMIDQHAAQERIKYEYFREKIGDVSNEIQNLLIPLTFHFS 520
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
+E ++ + H++ + K G LE G + + + P E +KD+I + +
Sbjct: 521 KDELMIINQHVEELDKVGVHLE----PFGGNDYIVDSYPVWFPAAEAEEIIKDMIEYVLE 576
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLA-SRACRSSIMIGDALGRNEMQKILEHLADLN 792
++ V ++R A +C+ SI L NEM ++ L +
Sbjct: 577 HK---------------KVNVKKIREEAAIMMSCKKSIKANHYLKNNEMADLVNQLRETE 621
Query: 793 SPWNCPHGRPTM 804
P+ CPHGRP +
Sbjct: 622 DPFTCPHGRPII 633
Score = 54.3 bits (129), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 41/61 (67%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ + + ++I AG+V++ S VKEL+EN++DA AT I I +++ G +VVDNG G
Sbjct: 4 IKELQTSLANKIAAGEVVERPGSVVKELLENAIDAQATEINIEVEQSGVASIRVVDNGTG 63
Query: 72 I 72
I
Sbjct: 64 I 64
Score = 43.9 bits (102), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 64/136 (47%), Gaps = 8/136 (5%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYF 170
+LKT GS + + ++GM + L + SD ++EG+++KP ++ Y
Sbjct: 195 ILKTNGSGRTNEVMAEIYGMKVAKDLVHITGETSD-YRLEGYVAKPEHSRS----NKHYI 249
Query: 171 --FVNDRPVDLPKVSKLVNELYKGA-NSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSD 227
F+N R + ++K + E Y ++PI +N + DVNV P K +V S
Sbjct: 250 SIFINGRYIKNFLINKAILEGYHTLLMVGRFPICYINIEMDPILVDVNVHPTKLEVRLSK 309
Query: 228 ECSILHALREGLQEIY 243
E + + E ++E +
Sbjct: 310 EDQLFELIVEKIREAF 325
>gi|389845999|ref|YP_006348238.1| DNA mismatch repair protein MutL [Haloferax mediterranei ATCC
33500]
gi|448616385|ref|ZP_21665095.1| DNA mismatch repair protein MutL [Haloferax mediterranei ATCC
33500]
gi|388243305|gb|AFK18251.1| DNA mismatch repair protein MutL [Haloferax mediterranei ATCC
33500]
gi|445751040|gb|EMA02477.1| DNA mismatch repair protein MutL [Haloferax mediterranei ATCC
33500]
Length = 735
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 92/194 (47%), Gaps = 24/194 (12%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLN--QQPLLRPLKLDLTP 674
M+++GQ +I+ + + L +VDQHAADE+ N+ERL + Q L P++L+LT
Sbjct: 534 MRILGQLLDTYIVAETSEGLVLVDQHAADERVNYERLKNEVEGDTPTQALAEPVELELTA 593
Query: 675 EEEVVASMHMDIIRKNGFSLEEDPHA-LAGLR-FRLKAVP--FSKKITFGVEDVKDLIST 730
E + + + + + GF HA G R ++ VP F + G+ ++D ++
Sbjct: 594 REAALFEEYREALAQVGF------HAGRTGERTVSVRTVPAVFDAALDPGL--LRDALTA 645
Query: 731 LADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLAD 790
+ + T D+V +LA AC SI +L + +L L D
Sbjct: 646 FVREEADGG------QKTVDAVADE----LLADLACYPSITGNTSLREGSVLDLLSALDD 695
Query: 791 LNSPWNCPHGRPTM 804
+P+ CPHGRP +
Sbjct: 696 CENPYACPHGRPVV 709
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 44/68 (64%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I +++ + RI AG+V++ +S VKEL ENSLDA AT + +A+ G E ++ D+G G
Sbjct: 4 IYQLDEKTIQRIAAGEVVERPASVVKELFENSLDADATRVSVAVDSGGVEGVRIRDDGVG 63
Query: 72 ISPNNFKV 79
+S + ++
Sbjct: 64 MSEEDLEL 71
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 64/132 (48%), Gaps = 4/132 (3%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYF 170
V T+G L+ +++V+G + + V + V G +S P + R+ D
Sbjct: 197 VFATEGRDDLQSTVLSVYGREVAESMVSVE-HDAPGISVSGLVSHPE--TTRSTRDYLST 253
Query: 171 FVNDRPVDLPKVSKLVNELYKGA-NSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDEC 229
FVNDR V + + V + Y G ++ +YP A++ V A DVNV P K +V + +E
Sbjct: 254 FVNDRYVTDRVLREAVLDAYGGQLDADRYPFAVLFVEVAPDAVDVNVHPRKMEVRWDEEP 313
Query: 230 SILHALREGLQE 241
+ + + +++
Sbjct: 314 EVKREVTDAVED 325
>gi|290968594|ref|ZP_06560132.1| DNA mismatch repair protein, C-terminal domain protein [Megasphaera
genomosp. type_1 str. 28L]
gi|335049319|ref|ZP_08542318.1| DNA mismatch repair protein MutL [Megasphaera sp. UPII 199-6]
gi|290781247|gb|EFD93837.1| DNA mismatch repair protein, C-terminal domain protein [Megasphaera
genomosp. type_1 str. 28L]
gi|333763456|gb|EGL40905.1| DNA mismatch repair protein MutL [Megasphaera sp. UPII 199-6]
Length = 632
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 91/180 (50%), Gaps = 21/180 (11%)
Query: 627 FIIGKLDQDLFIVDQHAADEKYNFERL-SQSTVLNQQPLLRPLKLDLTPEEEVVASMHMD 685
+II K +DL+I+DQHAA E+ ++R Q + Q LL P ++ + V+ + +
Sbjct: 457 YIIAKKGRDLYIIDQHAAHERVRYDRFCRQMENVPSQQLLTPEFVEADETDMVLLTEQRE 516
Query: 686 IIRKNGFSLEEDPHALAG-LRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSY 744
+ RK G++ E AG R++ VP + G ++K+ + T+ C +
Sbjct: 517 LFRKLGYTYSE-----AGPTTIRIEEVP--ADLPGG--EIKESLQTI------CRGLREN 561
Query: 745 KMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTM 804
K ++ R RA LA ACR +I GD + EMQK+LE L P+ CPHGRP +
Sbjct: 562 KHWDKATI---RHRA-LAYMACRGAIKAGDKITIREMQKLLEDLFRTEKPFVCPHGRPVI 617
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 50/71 (70%)
Query: 9 SPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDN 68
S I +++ ++I AG+V++ +S +KELVENS+DAGAT IE+ + + G+ + +V D+
Sbjct: 2 STVIAVLDEATRNKIAAGEVVERPASCIKELVENSIDAGATMIEVEIADGGQSYMRVTDD 61
Query: 69 GCGISPNNFKV 79
GCG+ P + ++
Sbjct: 62 GCGMGPEDARI 72
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 64/129 (49%), Gaps = 3/129 (2%)
Query: 112 LKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFF 171
L+T GS SL++ + ++G + + P+ +++ V GF+ +P + Q
Sbjct: 198 LQTGGSGSLQETVADIYGAEVAKEVFPLGASETEEIGVSGFVGRPSILKSSRMW--QTCV 255
Query: 172 VNDRPVDLPKVSKLVNELYKGANSRQ-YPIAIMNFIVPTRACDVNVTPDKRKVFFSDECS 230
VN R V P + K ++ Y + YP A+++ + A DVNV P K ++ F+DE +
Sbjct: 256 VNHRIVYNPMLFKAIDNAYHAMLPKAGYPFALLHIQLDPAALDVNVHPAKTEIKFADEKA 315
Query: 231 ILHALREGL 239
+ A+ +
Sbjct: 316 VYRAVYHAI 324
>gi|401679847|ref|ZP_10811771.1| DNA mismatch repair protein, C-terminal domain protein [Veillonella
sp. ACP1]
gi|400218974|gb|EJO49845.1| DNA mismatch repair protein, C-terminal domain protein [Veillonella
sp. ACP1]
Length = 652
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 90/187 (48%), Gaps = 21/187 (11%)
Query: 620 IGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQST-VLNQQPLLRPLKLDLTPEEEV 678
+GQ +I+ K DL+I+DQHAA E+ +++L +S+ + Q LL PL + T +E
Sbjct: 470 MGQVASCYILAKKGDDLYIIDQHAAHERVRYDKLCKSSESIPMQSLLVPLYSNATEDE-- 527
Query: 679 VASMHMDIIRKNGFSLEEDPHALAGLRFRLK-AVPFSKKITFGVEDVKDLISTLADNQGE 737
M+I+ E D AL L F ++ P K+ V DL+ + A Q
Sbjct: 528 -----MNIV-------ENDQQALLDLGFEVELGGPNQIKL---VGAPVDLVESKA--QEI 570
Query: 738 CSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNC 797
S + +Y D MLA +CR +I G L +M ++E L + P+ C
Sbjct: 571 LSYVFTYLHDHEQPTKAQLRHEMLAYASCRGAIKSGHNLNMYQMTTLIEDLFHTDKPYVC 630
Query: 798 PHGRPTM 804
PHGRPT+
Sbjct: 631 PHGRPTI 637
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 61/113 (53%), Gaps = 20/113 (17%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
TI +++ +++I AG+V++ +S VKEL+ENS+DAG+TSIE+ + E G + ++ DNG
Sbjct: 3 TIHVLDETTINKIAAGEVVERPASVVKELIENSIDAGSTSIEVEIGEGGSAYMRITDNGK 62
Query: 71 GISPNNFKVRAV--------------------FLCQAYALIAKGVRFVCTNTT 103
G++ + ++ + F +A A IA FV T T
Sbjct: 63 GMTEEDARLAVLRHATSKIQCVEDLFDIASLGFRGEALASIASVSHFVLTTRT 115
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 72/150 (48%), Gaps = 12/150 (8%)
Query: 110 VVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQY 169
V + T GS S++D + ++G N + +A +S+ +EG +SKP + Q
Sbjct: 195 VAIITPGSGSIQDTVAALYGYKTKNDIFTIA-YESEDIYIEGVVSKPTLLKSTRIW--QT 251
Query: 170 FFVNDRPVDLPKVSKLVNELYKGANSRQ-YPIAIMNFIVPTRACDVNVTPDKRKVFFSDE 228
VN+R + + K ++ Y + YP+ +++ VP D+NV P K +V F D+
Sbjct: 252 IIVNNRVISDKTILKAIDNAYHALLPKSGYPLVLLHITVPANMVDINVHPRKSEVKFEDD 311
Query: 229 --------CSILHALREGLQEIYSPNNASY 250
+IL+AL L + Y ++SY
Sbjct: 312 KIIFKAVYHAILNALNNPLHKRYERESSSY 341
>gi|448345459|ref|ZP_21534349.1| DNA mismatch repair protein MutL [Natrinema altunense JCM 12890]
gi|445634204|gb|ELY87388.1| DNA mismatch repair protein MutL [Natrinema altunense JCM 12890]
Length = 739
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 91/191 (47%), Gaps = 18/191 (9%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLN--QQPLLRPLKLDLTP 674
++V+GQ +++ + L ++DQHAADE+ N+ERL + + Q L P++L+LT
Sbjct: 543 LRVLGQLRDTYLVCEAPDGLVLIDQHAADERVNYERLQAAFADDPTAQALAEPVELELTA 602
Query: 675 EEEVVASMHMDIIRKNGFSLEE-DPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
E + + + + GF + D +A + VP T E ++D++++ D
Sbjct: 603 AEAEAFEHYSEALSRLGFYADRVDDRTVA-----VTTVPAVLAETLEPERLRDVLASFVD 657
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNS 793
E +T D++ L AC S+ +L + +L+ L D +
Sbjct: 658 GDREAG------AETVDAMADE----FLGDLACYPSLTGNTSLTEGSVVDLLDALDDCEN 707
Query: 794 PWNCPHGRPTM 804
P++CPHGRP +
Sbjct: 708 PYSCPHGRPVL 718
Score = 67.8 bits (164), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 50/68 (73%)
Query: 6 PTNSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQV 65
P ++ I +++ V RI AG+V++ +SAVKELVENSLDA A+S+++ ++E G E +V
Sbjct: 8 PQDATEIHELDEDTVARIAAGEVVERPASAVKELVENSLDADASSVDVTVEEGGTELIRV 67
Query: 66 VDNGCGIS 73
VD+G G+S
Sbjct: 68 VDDGHGMS 75
Score = 49.7 bits (117), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 54/133 (40%), Gaps = 20/133 (15%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSC-----KVEGFLSKPGQGSGRNLG 165
V T G + ++ V+G + + + PV D V G +S P N
Sbjct: 208 VFSTTGQGDRQAAVLAVYGREVASAMIPVEADGDDLPPGPLESVSGLVSHPET----NRS 263
Query: 166 DRQYF--FVNDRPVDLPKVSKLVNELYKGANSRQ-----YPIAIMNFIVPTRACDVNVTP 218
R Y +VN R V + V E GA Q YP + VP A DVNV P
Sbjct: 264 SRDYLATYVNGRAV----TADAVREGIMGAYGTQLGGDRYPFVTLFLAVPGDAVDVNVHP 319
Query: 219 DKRKVFFSDECSI 231
KR+V F D+ ++
Sbjct: 320 RKREVRFDDDDAV 332
>gi|406972146|gb|EKD95996.1| hypothetical protein ACD_24C00226G0004, partial [uncultured
bacterium]
Length = 534
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 90/187 (48%), Gaps = 33/187 (17%)
Query: 627 FIIGKLDQDLFIVDQHAADEKYNFERLSQS----------TVLNQQPLLRPLKLDLTPEE 676
F+I +L+ L IVDQHAA E+ +E+ +S VL+Q P ++ + E
Sbjct: 354 FLIKELNSGLLIVDQHAAHERIIYEQFLESFNNKKSEKLLYVLDQ-----PEYVNFSFLE 408
Query: 677 EVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQG 736
+ H+ IR GF LEE ++++ AVP K E +K++IS L +N+
Sbjct: 409 SEMLKDHITTIRSLGFELEE----FGQNQYKISAVPVLFKDQNISEALKEIISNLQENKL 464
Query: 737 ECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWN 796
++ R+R ++ ACRS+I G+ L + + +LE L+ + +
Sbjct: 465 --------------ALETKRIRKTISYLACRSAIKAGEYLTLEQRKNLLEKLSLTKTGYT 510
Query: 797 CPHGRPT 803
CPHGRP
Sbjct: 511 CPHGRPV 517
Score = 48.9 bits (115), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 145 DSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKG-ANSRQYPIAIM 203
D K+EGF+ KP S QY +VN R V VS + E Y R +P I+
Sbjct: 203 DLIKLEGFILKPQISS--ETKSNQYLYVNKRSVSNNLVSNAIKEAYGSFLEPRSFPGFIL 260
Query: 204 NFIVPTRACDVNVTPDKRKVFFSDECSI 231
N VP DVNV P K +V F ++ I
Sbjct: 261 NLTVPFDMVDVNVHPRKEEVDFWNDKYI 288
Score = 43.5 bits (101), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 29/42 (69%)
Query: 35 AVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNN 76
VKEL+ENS+DAGA+ I++ ++ +G V DNG G+ P +
Sbjct: 1 VVKELIENSIDAGASIIKVEIENFGLRKIAVSDNGEGMEPED 42
>gi|227529692|ref|ZP_03959741.1| DNA mismatch repair protein MutL, partial [Lactobacillus vaginalis
ATCC 49540]
gi|227350358|gb|EEJ40649.1| DNA mismatch repair protein MutL [Lactobacillus vaginalis ATCC
49540]
Length = 505
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 93/201 (46%), Gaps = 25/201 (12%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQ---STVLNQQPLLRPLKL 670
F ++ IGQ F++ + L+IVDQHAA E+ N+E+ + +QQ L PL L
Sbjct: 299 FPDLQYIGQLQGTFLLAQAGDGLYIVDQHAAQERINYEKFRKEIGQVSDDQQTFLVPLVL 358
Query: 671 DLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDV--KDLI 728
+ + + + + H+D + G LE + F L++ P G E+ K++I
Sbjct: 359 NYSTVDTMTITQHLDTLEAVGLHLE----SFGPNSFILRSHP--TWFAEGQEEATAKEMI 412
Query: 729 STLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHL 788
L N G+ S+ ++ TA M++ C+ +I L E + +L L
Sbjct: 413 EWLI-NDGKISV-HDFRQRTA---------IMMS---CKRAIKANHHLDDREAKALLHRL 458
Query: 789 ADLNSPWNCPHGRPTMRHLVD 809
+P+NCPHGRP H D
Sbjct: 459 PKCENPFNCPHGRPVTVHFND 479
Score = 43.5 bits (101), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 71/165 (43%), Gaps = 19/165 (11%)
Query: 73 SPNNFKVRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNI 132
SP R + AL V F T+ + + +T G+ +L+ + ++G+ +
Sbjct: 1 SPQTELARITDIVNRLALANPQVAFSLTHNNKE-----LFRTAGNDNLQQVVAAIYGIQV 55
Query: 133 YNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFV--NDRPVDLPKVSKLVNELY 190
+ P A + + K+ G +S P RQY + N R + + +L +
Sbjct: 56 GKKMLPFA-GEDNDFKISGLVSLPELTRA----SRQYITITINHRYI---RNFELTKAII 107
Query: 191 KGANSR----QYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSI 231
G S+ +YPIA++N + DVNV P KR+V S E +
Sbjct: 108 NGYESKLMVGRYPIAVLNIQLDPVLVDVNVHPAKREVRLSKEPQL 152
>gi|389740948|gb|EIM82138.1| DNA mismatch repair protein MutL [Stereum hirsutum FP-91666 SS1]
Length = 774
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 52/77 (67%)
Query: 5 TPTNSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQ 64
TP + IR + + +V+RI AG++I +SA+KEL+ENSLDAG TSI + +K+ G + Q
Sbjct: 8 TPVDPKPIRRLEQSLVNRIAAGEIIHRPASALKELLENSLDAGTTSIRVTVKDGGLKLMQ 67
Query: 65 VVDNGCGISPNNFKVRA 81
+ DNGCGI + + A
Sbjct: 68 IQDNGCGIKKGDLPILA 84
>gi|222110107|ref|YP_002552371.1| DNA mismatch repair protein Mutl [Acidovorax ebreus TPSY]
gi|221729551|gb|ACM32371.1| DNA mismatch repair protein MutL [Acidovorax ebreus TPSY]
Length = 657
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 83/194 (42%), Gaps = 21/194 (10%)
Query: 618 KVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLS----QSTVLNQQPLLRPLKLDLT 673
+ + Q + +I+ + Q L +VD HAA E+ +ERL Q + QPLL P T
Sbjct: 468 RALAQVHGVYILAESAQGLVVVDMHAAHERIVYERLKAQVDQGARIASQPLLIPATFAAT 527
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
PEE A H D + + G L+ VPFS + T V V ++
Sbjct: 528 PEEVATAEAHADTLARLG----------------LEVVPFSPR-TLAVRAVPTTLAQGNP 570
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNS 793
+ S+++ A +V +LA+ AC ++ L +EM +L + +
Sbjct: 571 VELARSVLAELATHDASTVVQRAQSEILATMACHGAVRANRRLTLDEMNALLRQMEVTDR 630
Query: 794 PWNCPHGRPTMRHL 807
C HGRPT R L
Sbjct: 631 SDQCNHGRPTWRQL 644
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 42/68 (61%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR + ++ +I AG+V++ +SAV+ELV+N+LDAGAT I + L G V D+G G
Sbjct: 18 IRDLPDELISQIAAGEVVERPASAVRELVDNALDAGATQITVRLLAGGVRLIAVEDDGSG 77
Query: 72 ISPNNFKV 79
I + V
Sbjct: 78 IPQDELPV 85
>gi|167765540|ref|ZP_02437604.1| hypothetical protein CLOSS21_00034 [Clostridium sp. SS2/1]
gi|167712725|gb|EDS23304.1| DNA mismatch repair domain protein [Clostridium sp. SS2/1]
Length = 645
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 97/190 (51%), Gaps = 21/190 (11%)
Query: 618 KVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQS---TVLNQQPLLRPLKLDLTP 674
K++GQ + + + + LFI+DQHAA EK N+ERL ++ + Q L P+ + ++
Sbjct: 458 KILGQLFKTYWLIEYEDQLFIMDQHAAHEKVNYERLMKNFKEKEIYSQRLEPPMVVTVSM 517
Query: 675 EEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADN 734
E + + D GF++E + G + ++ VP + +G+ + +DL L D
Sbjct: 518 TEAEALTRYKDAFAGLGFTIE----SFGGNEYCIREVPAN---LYGIGE-RDLFMELLDA 569
Query: 735 QGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSP 794
+ + +DT V S++ A+ AC+ SI + E++ +L+ L L +P
Sbjct: 570 VSQ----ENGTLDT--EVIASKI----ATMACKMSIKGNQRVSLMEVEHLLDELMKLENP 619
Query: 795 WNCPHGRPTM 804
+ CPHGRPT+
Sbjct: 620 YQCPHGRPTI 629
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 61/119 (51%), Gaps = 8/119 (6%)
Query: 112 LKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQY-- 169
+ T G+ +KD I ++G ++ L P+ +++ KV GF++KP G +R Y
Sbjct: 197 IYTSGNGKVKDIIYHIYGRDVAGALIPLE-AQNEDVKVTGFVAKPYVSRG----NRNYES 251
Query: 170 FFVNDRPVDLPKVSKLVNELYKGANSR-QYPIAIMNFIVPTRACDVNVTPDKRKVFFSD 227
+F+N R + + K + E Y+ + +YP ++F + DVNV P K ++ F +
Sbjct: 252 YFINGRYIKSSIIYKAIEEGYRTFTMKHRYPFVCLDFKIDQELLDVNVHPTKMEIRFRN 310
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ +++ + I AG+VI+ +S VKELVEN++DA A ++ + +K+ G +V DNG G
Sbjct: 4 IQLLDQKTIDNIAAGEVIERPASVVKELVENAVDAKANAVTVEIKDGGMTLIRVTDNGIG 63
Query: 72 ISPNNFKVRAVFLCQAYALI 91
I + +V+ FL A + I
Sbjct: 64 IPKD--QVKTAFLRHATSKI 81
>gi|448329178|ref|ZP_21518479.1| DNA mismatch repair protein MutL [Natrinema versiforme JCM 10478]
gi|445614365|gb|ELY68041.1| DNA mismatch repair protein MutL [Natrinema versiforme JCM 10478]
Length = 742
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 91/191 (47%), Gaps = 18/191 (9%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLN--QQPLLRPLKLDLTP 674
++V+GQ +++ + L ++DQHAADE+ N+ERL ++ + Q L P++L+LT
Sbjct: 546 LRVLGQLRDTYLVCETPDGLVLIDQHAADERVNYERLQEAVADDPTAQALAEPVELELTA 605
Query: 675 EEEVVASMHMDIIRKNGFSLEE-DPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
E + + + + GF + D +A + VP T E ++D++++ +
Sbjct: 606 AEAEAFEHYSEALSRLGFYADRVDDRTVA-----VTTVPAVFAETLEPERLRDVLTSFVE 660
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNS 793
E +T D++ L AC SI +L + +L L D +
Sbjct: 661 GDREAG------AETVDALADE----FLGDLACYPSITGNTSLTEGSVIDLLSALDDCEN 710
Query: 794 PWNCPHGRPTM 804
P++CPHGRP +
Sbjct: 711 PYSCPHGRPVV 721
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 50/74 (67%)
Query: 6 PTNSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQV 65
P + IR +++ V RI AG+V++ +SAVKELVENSLDA A S+++ ++E G E +V
Sbjct: 8 PQDDTGIRRLDEDTVARIAAGEVVERPASAVKELVENSLDADADSVDVTVEEGGTELIRV 67
Query: 66 VDNGCGISPNNFKV 79
D+G G++ + +
Sbjct: 68 ADDGRGMNEADLRA 81
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 57/133 (42%), Gaps = 20/133 (15%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSC-----KVEGFLSKPGQGSGRNLG 165
V T G L+ +++V+G ++ + + PV + V G +S P N
Sbjct: 208 VFSTTGQGDLQAAVLSVYGRDVASAMIPVEASGDELPPGPLESVSGLVSHPET----NRS 263
Query: 166 DRQYF--FVNDRPVDLPKVSKLVNELYKGANSRQ-----YPIAIMNFIVPTRACDVNVTP 218
R Y +VN R V + V E GA Q YP + VP A DVNV P
Sbjct: 264 SRDYLATYVNGRAV----TADAVREGIMGAYGTQLGGDRYPFVTLFLEVPGDAVDVNVHP 319
Query: 219 DKRKVFFSDECSI 231
KR+V F D+ ++
Sbjct: 320 RKREVRFDDDDAV 332
>gi|429761466|ref|ZP_19293891.1| DNA mismatch repair protein [Anaerostipes hadrus DSM 3319]
gi|429183719|gb|EKY24760.1| DNA mismatch repair protein [Anaerostipes hadrus DSM 3319]
Length = 645
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 97/190 (51%), Gaps = 21/190 (11%)
Query: 618 KVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQS---TVLNQQPLLRPLKLDLTP 674
K++GQ + + + + LFI+DQHAA EK N+ERL ++ + Q L P+ + ++
Sbjct: 458 KILGQLFKTYWLIEYEDQLFIMDQHAAHEKVNYERLMKNFKEKEIYSQRLEPPMVVTVSM 517
Query: 675 EEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADN 734
E + + D GF++E + G + ++ VP + +G+ + +DL L D
Sbjct: 518 TEAEALTRYKDAFAGLGFTIE----SFGGNEYCIREVPAN---LYGIGE-RDLFMELLDA 569
Query: 735 QGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSP 794
+ + +DT V S++ A+ AC+ SI + E++ +L+ L L +P
Sbjct: 570 VSQ----ENGTLDT--EVIASKI----ATMACKMSIKGNQRVSLMEVEHLLDELMKLENP 619
Query: 795 WNCPHGRPTM 804
+ CPHGRPT+
Sbjct: 620 YQCPHGRPTI 629
Score = 55.8 bits (133), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 61/119 (51%), Gaps = 8/119 (6%)
Query: 112 LKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQY-- 169
+ T G+ +KD I ++G ++ L P+ +++ KV GF++KP G +R Y
Sbjct: 197 IYTSGNGKVKDIIYHIYGRDVAGALIPLE-AQNEDVKVTGFVAKPYVSRG----NRNYES 251
Query: 170 FFVNDRPVDLPKVSKLVNELYKGANSR-QYPIAIMNFIVPTRACDVNVTPDKRKVFFSD 227
+F+N R + + K + E Y+ + +YP ++F + DVNV P K ++ F +
Sbjct: 252 YFINGRYIKSSIIYKAIEEGYRTFTMKHRYPFVCLDFKIDQELLDVNVHPTKMEIRFRN 310
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ +++ + I AG+VI+ +S VKELVEN++DA A ++ + +K+ G +V DNG G
Sbjct: 4 IQLLDQKTIDNIAAGEVIERPASVVKELVENAVDAKANAVTVEIKDGGMTLIRVTDNGIG 63
Query: 72 ISPNNFKVRAVFLCQAYALI 91
I + +V+ FL A + I
Sbjct: 64 IPKD--QVKTAFLRHATSKI 81
>gi|330826560|ref|YP_004389863.1| DNA mismatch repair protein mutL [Alicycliphilus denitrificans
K601]
gi|329311932|gb|AEB86347.1| DNA mismatch repair protein mutL [Alicycliphilus denitrificans
K601]
Length = 654
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 83/194 (42%), Gaps = 21/194 (10%)
Query: 618 KVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLS----QSTVLNQQPLLRPLKLDLT 673
+ + Q + +I+ + Q L +VD HAA E+ +ERL Q L QPLL P T
Sbjct: 465 RAVAQIHGVYILAESAQGLVVVDMHAAHERIVYERLKAQVDQGARLASQPLLIPATFAAT 524
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
PEE A H D + AL GL VPFS + T V V + ++
Sbjct: 525 PEEVATAESHADTL------------ALLGLEI----VPFSPR-TLAVRAVPNTLAQGNP 567
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNS 793
+ S+++ A +V +LA+ AC ++ L +EM +L +
Sbjct: 568 VELARSVLAELGQHDASTVVQRARNEILATMACHGAVRANRKLTIDEMNALLRQMEVTER 627
Query: 794 PWNCPHGRPTMRHL 807
C HGRPT R L
Sbjct: 628 SDQCNHGRPTWRQL 641
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Query: 2 DVETPTNSPTIRPINK---GVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEY 58
D TP+ RPI ++ +I AG+V++ +SAV+ELV+N+LDAGAT + + L
Sbjct: 15 DSATPSVPAPRRPIRDLPDELISQIAAGEVVERPASAVRELVDNALDAGATQVTVRLLAG 74
Query: 59 GEEWFQVVDNGCGISPNNFKV 79
G V D+G GI + +
Sbjct: 75 GVRLIAVEDDGMGIPRDELPI 95
>gi|319761780|ref|YP_004125717.1| DNA mismatch repair protein mutl [Alicycliphilus denitrificans BC]
gi|317116341|gb|ADU98829.1| DNA mismatch repair protein MutL [Alicycliphilus denitrificans BC]
Length = 658
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 83/194 (42%), Gaps = 21/194 (10%)
Query: 618 KVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLS----QSTVLNQQPLLRPLKLDLT 673
+ + Q + +I+ + Q L +VD HAA E+ +ERL Q L QPLL P T
Sbjct: 469 RAVAQIHGVYILAESAQGLVVVDMHAAHERIVYERLKAQVDQGARLASQPLLIPATFAAT 528
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
PEE A H D + AL GL VPFS + T V V + ++
Sbjct: 529 PEEVATAESHADTL------------ALLGLEI----VPFSPR-TLAVRAVPNTLAQGNP 571
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNS 793
+ S+++ A +V +LA+ AC ++ L +EM +L +
Sbjct: 572 VELARSVLAELGQHDASTVVQRARNEILATMACHGAVRANRKLTIDEMNALLRQMEVTER 631
Query: 794 PWNCPHGRPTMRHL 807
C HGRPT R L
Sbjct: 632 SDQCNHGRPTWRQL 645
Score = 53.1 bits (126), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Query: 2 DVETPTNSPTIRPINK---GVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEY 58
D TP+ RPI ++ +I AG+V++ +SAV+ELV+N+LDAGAT + + L
Sbjct: 15 DSATPSVPAPRRPIRDLPDELISQIAAGEVVERPASAVRELVDNALDAGATQVTVRLLAG 74
Query: 59 GEEWFQVVDNGCGISPNNFKV 79
G V D+G GI + +
Sbjct: 75 GVRLIAVEDDGMGIPRDELPI 95
>gi|448303532|ref|ZP_21493481.1| DNA mismatch repair protein MutL [Natronorubrum sulfidifaciens JCM
14089]
gi|445593317|gb|ELY47495.1| DNA mismatch repair protein MutL [Natronorubrum sulfidifaciens JCM
14089]
Length = 721
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 92/191 (48%), Gaps = 18/191 (9%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLN--QQPLLRPLKLDLTP 674
++V+GQ+ +++ + L ++DQHAADE+ N+ERL ++ Q L P+ L+LT
Sbjct: 525 LRVLGQYTDTYLVCETADGLVLIDQHAADERVNYERLKRAFADEPAAQALASPVDLELTA 584
Query: 675 EEEVVASMHMDIIRKNGFSLEE-DPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
E + + + + GF + D +A + VP + T E ++D++++ +
Sbjct: 585 VEAEAFESYREALSRLGFYADRVDDRTVA-----VTTVPAVLEETLEPEQLRDVLASFVE 639
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNS 793
+ +T D++ L AC SI +L + +LE L D +
Sbjct: 640 GDRKTG------AETVDALADE----FLGDLACYPSITGNTSLTEGSVVDLLEALDDCEN 689
Query: 794 PWNCPHGRPTM 804
P++CPHGRP +
Sbjct: 690 PYSCPHGRPVL 700
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 47/68 (69%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I ++ V RI AG+V++ +SAVKEL+ENSLDA A+S+++ +++ G E +V D+G G
Sbjct: 11 IHQLDDDTVARIAAGEVVERPASAVKELLENSLDADASSVDVTVEDGGAELIRVADDGAG 70
Query: 72 ISPNNFKV 79
+S + +
Sbjct: 71 MSEADLRA 78
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 57/133 (42%), Gaps = 20/133 (15%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSC-----KVEGFLSKPGQGSGRNLG 165
V T G L+ +++V+G + + + PV D V G +S P N
Sbjct: 205 VFATTGQGDLQAAVLSVYGREVASAMIPVDANGEDLPPGPLESVSGLVSHPET----NRS 260
Query: 166 DRQYF--FVNDRPVDLPKVSKLVNELYKGANSRQ-----YPIAIMNFIVPTRACDVNVTP 218
R+Y +VN R V + V E GA Q YP + VP A DVNV P
Sbjct: 261 SREYLATYVNGRAV----TADAVREGIMGAYGTQLGGDRYPFVTLFLEVPGDAVDVNVHP 316
Query: 219 DKRKVFFSDECSI 231
KR+V F D+ ++
Sbjct: 317 RKREVRFDDDDAV 329
>gi|209543574|ref|YP_002275803.1| DNA mismatch repair protein MutL [Gluconacetobacter
diazotrophicus PAl 5]
gi|209531251|gb|ACI51188.1| DNA mismatch repair protein MutL [Gluconacetobacter
diazotrophicus PAl 5]
Length = 639
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 55/76 (72%)
Query: 2 DVETPTNSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEE 61
D +P P IR +++ VV+RI AG+VI+ ++A+KELVEN++D+GA I + L+ G E
Sbjct: 4 DSSSPPARPVIRRLSEQVVNRIAAGEVIERPAAALKELVENAIDSGARRIAVLLERGGIE 63
Query: 62 WFQVVDNGCGISPNNF 77
+VVD+GCG++P++
Sbjct: 64 RIEVVDDGCGMTPDDL 79
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 71/178 (39%), Gaps = 15/178 (8%)
Query: 633 DQDLFIVDQHAADEKYNFERLSQSTV---LNQQPLLRPLKLDLTPEEEVVASMHMDIIRK 689
D L +VDQHAA E+ ERL + L Q LL P + L + + +
Sbjct: 462 DGSLVLVDQHAAHERLTHERLRARYLDGTLRAQRLLLPEVVTLPRGQADLLLSFAGTLAA 521
Query: 690 NGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTA 749
G +E G ++A+P G +D L+ +AD E +
Sbjct: 522 LGVEIEP----FGGGAVLVRALP----ALLGTDDPAGLLRDMADELAEDDLADPGDTGAL 573
Query: 750 DSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRHL 807
D R+ A++A AC S+ G +L R EM +L + C HGRPT L
Sbjct: 574 DG----RLDAVIARMACHGSVRAGRSLTRAEMDALLRDMERTPRAGTCSHGRPTWLKL 627
>gi|121533676|ref|ZP_01665503.1| DNA mismatch repair protein MutL [Thermosinus carboxydivorans Nor1]
gi|121307667|gb|EAX48582.1| DNA mismatch repair protein MutL [Thermosinus carboxydivorans Nor1]
Length = 602
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 96/198 (48%), Gaps = 37/198 (18%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQST-VLNQQPLLRPLKLDLTPE 675
++V+GQ N FI+ L+I+DQHAA E+ +E L+QS + Q LL P +D
Sbjct: 417 LRVLGQINDCFIVAAGSDGLYIIDQHAAHERILYEHLAQSAGRVPAQQLLVPRVVDFDER 476
Query: 676 EEVVASMHMDIIRKN-------GFSLEE-DPHALAGLRFRLKAVPFSKKITFGVEDVKDL 727
+ +D+I +N GF LE+ P ++ RL VP T ++++
Sbjct: 477 D-------IDLILQNEPLFYELGFRLEQIGPRSM-----RLLEVPSDIPGTEIEGLLREI 524
Query: 728 ISTLADNQGECSIISSYKMDTADSVCPSRVRAM-LASRACRSSIMIGDALGRNEMQKILE 786
+S L + M T + +R + L + ACRS++ G+ L +MQ +++
Sbjct: 525 LSAL------------HNMQTPKA---HEIRHIFLQTAACRSAVKAGENLNMRQMQALID 569
Query: 787 HLADLNSPWNCPHGRPTM 804
L N P+ CPHGRP +
Sbjct: 570 ELCSTNRPYTCPHGRPAI 587
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 66/136 (48%), Gaps = 6/136 (4%)
Query: 106 NVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQ-GSGRNL 164
N K VL T G+ L D +++G L P+ D + G++ KP S R
Sbjct: 192 NNKRQVLATTGTGRLFDAAASLYGYKAATELLPLDYTDGD-IHITGYVGKPHLLKSSRQW 250
Query: 165 GDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQ-YPIAIMNFIVPTRACDVNVTPDKRKV 223
Q + VN R + +SK ++ Y + +P+AI+ ++P+ DVNV P K +V
Sbjct: 251 ---QTWTVNGRTISNRMLSKALDNAYHSLLPKNGFPLAIIQIVIPSDKVDVNVHPQKNEV 307
Query: 224 FFSDECSILHALREGL 239
FSDE ++ A+ + +
Sbjct: 308 KFSDEQAVFRAVYKAV 323
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 45/63 (71%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
TIR +++ ++I AG+V++ +S VKELVENS+DA + SIE+ + + G + +V D+G
Sbjct: 4 TIRVLDETTANKIAAGEVVERPASVVKELVENSIDAQSRSIEVEIVDGGINYIRVSDDGI 63
Query: 71 GIS 73
G+S
Sbjct: 64 GMS 66
>gi|374995725|ref|YP_004971224.1| DNA mismatch repair protein MutL [Desulfosporosinus orientis DSM
765]
gi|357214091|gb|AET68709.1| DNA mismatch repair protein MutL [Desulfosporosinus orientis DSM
765]
Length = 650
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 91/196 (46%), Gaps = 20/196 (10%)
Query: 612 EDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQP---LLRPL 668
+ M + Q +I+ + L I+DQHAA E+ N+ERL + QP LL P+
Sbjct: 457 QSLSHMWPLTQLFNTYILATDGKILTIIDQHAAHERINYERLLREFKEADQPSQVLLIPI 516
Query: 669 KLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLI 728
++ T +EE V ++ I+ + GF LE+ + L+ +P E ++ I
Sbjct: 517 PMEFTVQEEQVLLENLWILNEMGFILEQ----FGSRTYLLRGIPVQTGNFPADELLRQFI 572
Query: 729 STLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHL 788
++ T D + + + AC+ SI D+L +EM++++ L
Sbjct: 573 E---------EVLIKNSPPTFDKMIEEWIYML----ACKESIKARDSLNTHEMEQLIAAL 619
Query: 789 ADLNSPWNCPHGRPTM 804
++P+ CPHGRPTM
Sbjct: 620 GRTHNPYTCPHGRPTM 635
Score = 70.1 bits (170), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 70/133 (52%), Gaps = 4/133 (3%)
Query: 108 KSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDR 167
+ VVL+T G L++ I V G ++ L P+ + + ++EGF+S P R+
Sbjct: 194 QQVVLQTTGRGDLREAIGAVIGYDLARQLIPIQMS-DEKWRLEGFISPPNLV--RSSKQA 250
Query: 168 QYFFVNDRPVDLPKVSKLVNELYKG-ANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFS 226
Q+F VN R + P +S+ + E Y ++ +PIA+++ +P DVNV P K V F
Sbjct: 251 QFFMVNGRIIRSPLLSRALAEGYHTLIPAKHHPIAVLHVSLPPSEYDVNVHPTKMDVRFK 310
Query: 227 DECSILHALREGL 239
DE + +RE +
Sbjct: 311 DEAGLSQFIREAV 323
Score = 55.1 bits (131), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 42/64 (65%)
Query: 9 SPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDN 68
+P I ++ ++I AG+V++ +S VKELVENSLDAGA I+I ++ G +V D+
Sbjct: 2 TPLIHILDANSANQIAAGEVVERPASVVKELVENSLDAGAKHIDITIEGNGVPLIRVRDD 61
Query: 69 GCGI 72
G GI
Sbjct: 62 GSGI 65
>gi|296117465|ref|ZP_06836052.1| DNA mismatch repair protein MutL [Gluconacetobacter hansenii ATCC
23769]
gi|295975986|gb|EFG82777.1| DNA mismatch repair protein MutL [Gluconacetobacter hansenii ATCC
23769]
Length = 633
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 55/73 (75%)
Query: 7 TNSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVV 66
+ P IR +++ VV+RI AG+VI+ ++A+KELVEN+LD+GA I +AL G E +V+
Sbjct: 8 ADRPVIRRLSEQVVNRIAAGEVIERPAAALKELVENALDSGAQRISVALLHGGIERIEVI 67
Query: 67 DNGCGISPNNFKV 79
D+GCG++P++ ++
Sbjct: 68 DDGCGMTPDDLRL 80
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 82/199 (41%), Gaps = 16/199 (8%)
Query: 613 DFGRMKVIGQFNLGFIIGKLDQ-DLFIVDQHAADEKYNFERLSQSTV---LNQQPLLRPL 668
DF + Q +I+ + + +L +VDQHAA E+ ERL + + Q LL P
Sbjct: 435 DFPLGAAVAQVLGTYILAETARGELVLVDQHAAHERLTHERLRAQYLGGEIRAQRLLLPE 494
Query: 669 KLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLI 728
+++ + + D + G ++ A G ++ VP G D ++
Sbjct: 495 VVNMPRGQADLLMSFADTLSALGLEID----AFGGDAVMVRTVP----ALLGGGDAAAML 546
Query: 729 STLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHL 788
LA+ E +++ + D R+ A++A AC S+ G L EM +L +
Sbjct: 547 RDLAEELAEDELLAPAQAQAVDG----RLDAIIARMACHGSVRAGRRLTHEEMNALLRDM 602
Query: 789 ADLNSPWNCPHGRPTMRHL 807
C HGRPT L
Sbjct: 603 ERTPRAGTCSHGRPTWLKL 621
>gi|402572916|ref|YP_006622259.1| DNA mismatch repair protein MutL [Desulfosporosinus meridiei DSM
13257]
gi|402254113|gb|AFQ44388.1| DNA mismatch repair protein MutL [Desulfosporosinus meridiei DSM
13257]
Length = 662
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 94/196 (47%), Gaps = 20/196 (10%)
Query: 612 EDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERL-SQSTVLNQ--QPLLRPL 668
E M + Q +I+ + L ++DQHAA E+ N+ERL + +Q Q LL P+
Sbjct: 469 ESLNHMWPLTQLFNTYILATDGKVLIMIDQHAAHERINYERLLKEFKAADQFSQTLLIPI 528
Query: 669 KLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLI 728
++ T +EE V ++ I+ + GF +E+ + L+ +P + G +++
Sbjct: 529 PMEFTLQEEQVLLENLWILNEMGFIIEQ----FGSRTYLLRGIP----VQTGSFQADEML 580
Query: 729 STLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHL 788
+N ++ T D + + + AC+ SI D+L EM++++ L
Sbjct: 581 RQFIEN-----VLMKDSPPTFDKILEEWIYML----ACKESIKAQDSLNLPEMEQLIASL 631
Query: 789 ADLNSPWNCPHGRPTM 804
+ +P+ CPHGRPTM
Sbjct: 632 SRTENPYTCPHGRPTM 647
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 72/152 (47%), Gaps = 9/152 (5%)
Query: 89 ALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCK 148
AL + F T+ + +VL+T G L++ I V G +I L P+ + + +
Sbjct: 180 ALAHPEIAFTLTHPS-----QIVLQTTGRGDLREAIAAVLGHSIARQLMPIT-ARHEKWQ 233
Query: 149 VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKG-ANSRQYPIAIMNFIV 207
+EGF+S P R+ QYF +N R V +S+ + E Y + +PI +++ V
Sbjct: 234 LEGFISPPNLV--RSSKQSQYFMLNGRTVRSSILSRALTEGYHTLIPVKLHPIVVLHLTV 291
Query: 208 PTRACDVNVTPDKRKVFFSDECSILHALREGL 239
DVNV P K V F +E + ++E +
Sbjct: 292 SPGDYDVNVHPTKMDVRFKEEQGLSQFIKEAV 323
Score = 58.9 bits (141), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 47/74 (63%)
Query: 9 SPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDN 68
+P I ++ ++I AG+V++ +S VKELVENS+DAGA I+I+++ G +V D+
Sbjct: 2 TPVIHILDAHSANQIAAGEVVERPASVVKELVENSIDAGAKHIDISIEGNGVPMIRVRDD 61
Query: 69 GCGISPNNFKVRAV 82
GCGI + + +
Sbjct: 62 GCGIGTKDLPLAVI 75
>gi|291559007|emb|CBL37807.1| DNA mismatch repair protein MutL [butyrate-producing bacterium
SSC/2]
Length = 645
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 97/190 (51%), Gaps = 21/190 (11%)
Query: 618 KVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQS---TVLNQQPLLRPLKLDLTP 674
K++GQ + + + + LFI+DQHAA EK N+ERL ++ + Q L P+ + ++
Sbjct: 458 KILGQLFKTYWLIEYEDQLFIMDQHAAHEKVNYERLMKNFKEKEIYSQRLEPPMVVTVSM 517
Query: 675 EEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADN 734
E + + D GF++E + G + ++ VP + +G+ + +DL L D
Sbjct: 518 TEAEALTRYKDAFAGLGFTIE----SFGGNEYCIREVPAN---LYGIGE-RDLFMELLDA 569
Query: 735 QGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSP 794
+ + +DT V S++ A+ AC+ SI + E++ +L+ L L +P
Sbjct: 570 VSQ----ENGTLDT--EVIASKI----ATMACKMSIKGNQRVSLMEVEHLLDELMKLENP 619
Query: 795 WNCPHGRPTM 804
+ CPHGRPT+
Sbjct: 620 YQCPHGRPTI 629
Score = 55.8 bits (133), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 60/117 (51%), Gaps = 8/117 (6%)
Query: 112 LKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQY-- 169
+ T G+ +KD I ++G ++ L P+ +++ KV GF++KP G +R Y
Sbjct: 197 IYTSGNGKVKDIIYHIYGRDVAGALIPLE-AQNEDVKVTGFVAKPYVSRG----NRNYES 251
Query: 170 FFVNDRPVDLPKVSKLVNELYKGANSR-QYPIAIMNFIVPTRACDVNVTPDKRKVFF 225
+F+N R + + K + E Y+ + +YP ++F + DVNV P K ++ F
Sbjct: 252 YFINGRYIKSSIIYKAIEEGYRTFTMKHRYPFVCLDFKIDQELLDVNVHPTKMEIRF 308
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ +++ + I AG+VI+ +S VKELVEN++DA A ++ + +K+ G +V DNG G
Sbjct: 4 IQLLDQKTIDNIAAGEVIERPASVVKELVENAVDAKANAVTVEIKDGGMTLIRVTDNGIG 63
Query: 72 ISPNNFKVRAVFLCQAYALI 91
I + +V+ FL A + I
Sbjct: 64 IPKD--QVKTAFLRHATSKI 81
>gi|167630633|ref|YP_001681132.1| DNA mismatch repair protein mutl [Heliobacterium modesticaldum
Ice1]
gi|238687867|sp|B0TB10.1|MUTL_HELMI RecName: Full=DNA mismatch repair protein MutL
gi|167593373|gb|ABZ85121.1| DNA mismatch repair protein mutl [Heliobacterium modesticaldum
Ice1]
Length = 660
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 90/192 (46%), Gaps = 28/192 (14%)
Query: 620 IGQFNLGFIIGKLDQDLFIVDQHAADEKYNF----ER-LSQSTVLNQQPLLRPLKLDLTP 674
IGQF +I+ + L++VDQHAA E+ + ER L+++ V Q LL P+ + LTP
Sbjct: 475 IGQFRRSYILAEGGDTLYLVDQHAAHERVLYHGLKERYLNEAGVCASQQLLLPVTVTLTP 534
Query: 675 EEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVED--VKDLISTLA 732
E A + +R G +E G ++AVP + G E +D++++L
Sbjct: 535 AEFQGAMEAIAELRDAGLIVEH----FGGNTLLIRAVPVG--LPPGEEKGFFRDILNSLM 588
Query: 733 DNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLN 792
+ +I RA L+S ACR ++ G + EM +L+ LA L
Sbjct: 589 KGLRDREVIR---------------RAALSSMACRGAVKAGQVMSHAEMGALLQQLARLE 633
Query: 793 SPWNCPHGRPTM 804
CPHGRP +
Sbjct: 634 GVDTCPHGRPYL 645
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 50/66 (75%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
I+ ++ V++I AG+V++ +S VKEL+EN+LDAGAT I+I L E G++ +++DNGC
Sbjct: 3 VIQRLDTHTVNQIAAGEVVERPASIVKELLENALDAGATRIDITLAEGGKKLIRIIDNGC 62
Query: 71 GISPNN 76
G++ ++
Sbjct: 63 GMAADD 68
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 60/122 (49%), Gaps = 3/122 (2%)
Query: 108 KSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDR 167
K + ++ G++ + + VFG I + L P++ D + GF+ P RN +
Sbjct: 193 KQISFRSPGNNKPLETLSAVFGREIISFLLPLSAVAPDGWTLRGFIGSPSL--HRNNRNH 250
Query: 168 QYFFVNDRPVDLPKVSKLVNELYKGA-NSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFS 226
Q +FVN R V +S+ V E Y G ++P +++ +P + DVN P K+++ F
Sbjct: 251 QNWFVNQRWVRCRILSQAVEEAYHGMLPGGRFPFFVLHLELPPQTIDVNSHPTKQEIKFD 310
Query: 227 DE 228
E
Sbjct: 311 RE 312
>gi|255561427|ref|XP_002521724.1| conserved hypothetical protein [Ricinus communis]
gi|223539115|gb|EEF40711.1| conserved hypothetical protein [Ricinus communis]
Length = 1137
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 97/225 (43%), Gaps = 38/225 (16%)
Query: 618 KVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLD---LTP 674
KV+ Q + FI + L I+DQHAADE+ E L Q + + + L ++ + P
Sbjct: 900 KVLQQVDNKFIPIVANGTLAIIDQHAADERIRLEELRQKVLCGEARTVTYLDVEKELILP 959
Query: 675 E------EEVVASM-----------HMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKI 717
E + A + H +KN L ++P + L AVP +
Sbjct: 960 EIGYQLLQNYAAQIRDWGWICNIQAHSGSFKKNLNILHQEPTVVT-----LLAVPCILDV 1014
Query: 718 TFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALG 777
D+ + + LAD G S P V +L +ACR +IM GD+L
Sbjct: 1015 NLSDGDLLEFLQQLADTDGS-------------STMPQSVLRVLNFKACRGAIMFGDSLL 1061
Query: 778 RNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKNIDENGA 822
R+E I+E L + + C HGRPT LVDL ++K I + G
Sbjct: 1062 RSECALIVEELKKTSLCFQCAHGRPTTVPLVDLVELQKQIVKVGV 1106
Score = 50.1 bits (118), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 48/79 (60%), Gaps = 5/79 (6%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
TI+ + + V + + +G ++ DL+ V+ELV NSLDAGA+ + + + G + +VVD+GC
Sbjct: 3 TIKRLPESVRNSMRSGIILFDLTRVVEELVFNSLDAGASKVWVYVGA-GTCYVKVVDDGC 61
Query: 71 GISPNNFKVRAVFLCQAYA 89
GIS + V L Q Y
Sbjct: 62 GISRDGL----VLLGQRYV 76
>gi|209966848|ref|YP_002299763.1| DNA mismatch repair protein MutL [Rhodospirillum centenum SW]
gi|209960314|gb|ACJ00951.1| DNA mismatch repair protein MutL, putative [Rhodospirillum
centenum SW]
Length = 617
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 53/70 (75%)
Query: 10 PTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNG 69
PT+R + + +V+RI AG+V++ ++AVKELVEN+LDAGA+ IE+ L++ G+ V D+G
Sbjct: 2 PTLRRLPERLVNRIAAGEVVERPAAAVKELVENALDAGASRIEVVLRDGGKALIGVADDG 61
Query: 70 CGISPNNFKV 79
CG++P ++
Sbjct: 62 CGMAPEELEL 71
Score = 56.2 bits (134), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 78/186 (41%), Gaps = 21/186 (11%)
Query: 622 QFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTV---LNQQPLLRPLKLDLTPEEEV 678
Q + +I+ + + + IVDQHAA E+ +ER+ + + +Q LL P ++L P +
Sbjct: 433 QLHTTYIVAQTEDGIVIVDQHAAHERLVYERMKHDLLAGGVKRQGLLIPEVVELDPADAE 492
Query: 679 VASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGEC 738
+ + G LE PF V +V L+ AD +G
Sbjct: 493 RLGERAAELAELGLVLE----------------PFGTGCVV-VREVPALLGARADVRGLV 535
Query: 739 SIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNC 797
++ + D++ R+ A+ + AC S+ G + +EM +L + C
Sbjct: 536 RDLADELAELGDALALKERLEAVCSRMACHGSVRAGRPMNADEMNALLRQMEATPHSGQC 595
Query: 798 PHGRPT 803
HGRPT
Sbjct: 596 NHGRPT 601
>gi|302386430|ref|YP_003822252.1| DNA mismatch repair protein MutL [Clostridium saccharolyticum WM1]
gi|302197058|gb|ADL04629.1| DNA mismatch repair protein MutL [Clostridium saccharolyticum WM1]
Length = 639
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 93/191 (48%), Gaps = 23/191 (12%)
Query: 618 KVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLR----PLKLDLT 673
K+IGQ + + + + L+I+DQHAA EK +E+ + T+ +++ L + P+ L L
Sbjct: 452 KLIGQVFDTYWLVEFHEQLYIIDQHAAHEKVLYEK-TMGTLKSKEYLSQLVSPPIILTLN 510
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
EE + H+ GF +E G + ++ VP + F + K+L+ + D
Sbjct: 511 QNEEALLKRHLKYFTDIGFEIE----PFGGREYAVRGVPAN---LFSIAK-KELLIEMID 562
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNS 793
E S P + +AS +C++++ G L E ++++ L +L +
Sbjct: 563 GLSE----------DGSSHSPDIIYEKVASLSCKAAVKGGHRLSAAEANELIDQLLNLEN 612
Query: 794 PWNCPHGRPTM 804
P+ CPHGRPT+
Sbjct: 613 PYACPHGRPTI 623
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 70/148 (47%), Gaps = 15/148 (10%)
Query: 95 VRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLS 154
+RF+ N L T G+ +LKD + TVFG I L V + K + + G++
Sbjct: 187 IRFIQNNQNK-------LHTSGNHNLKDIVYTVFGREIAANLLEVTVKKPE-VSIHGYIG 238
Query: 155 KPGQGSGRNLGDRQY--FFVNDRPVDLPKVSKLVNELYKG-ANSRQYPIAIMNFIVPTRA 211
KP G +R Y +F+N R + +S+ + E YK +YP +++F +
Sbjct: 239 KPVISRG----NRNYENYFINGRYIKSSIISRAIEEAYKPFMMQHKYPFTMLHFSIDPEM 294
Query: 212 CDVNVTPDKRKVFFSDECSILHALREGL 239
DVNV P K ++ F D I H + + +
Sbjct: 295 LDVNVHPTKMELRFRDGEMIYHMVYQAV 322
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 45/63 (71%)
Query: 10 PTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNG 69
P I +++ +++I AG+VI+ +S VKEL+EN++DA AT++ + +KE G +V DNG
Sbjct: 2 PNITVLDQNTINKIAAGEVIERPASVVKELLENAIDARATAVTVEIKEGGTSLIRVTDNG 61
Query: 70 CGI 72
CGI
Sbjct: 62 CGI 64
>gi|448338265|ref|ZP_21527315.1| DNA mismatch repair protein MutL [Natrinema pallidum DSM 3751]
gi|445623211|gb|ELY76642.1| DNA mismatch repair protein MutL [Natrinema pallidum DSM 3751]
Length = 738
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 91/191 (47%), Gaps = 18/191 (9%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLN--QQPLLRPLKLDLTP 674
++V+GQ +++ + L ++DQHAADE+ N+ERL + + Q L P++L+LT
Sbjct: 543 LRVLGQLRDTYLVCEAPDGLVLIDQHAADERVNYERLQAAFADDPTAQALAEPVELELTA 602
Query: 675 EEEVVASMHMDIIRKNGFSLEE-DPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
E + + + + GF + D +A + VP T E ++D++++ D
Sbjct: 603 AEAEAFDHYNEALSRLGFYADRIDDRTVA-----VTTVPAVLAETLEPERLRDVLASFVD 657
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNS 793
E +T D++ L AC S+ +L + +L+ L D +
Sbjct: 658 GDREAG------AETVDAMADE----FLGDLACYPSLTGNTSLTEGSIVDLLDALDDCEN 707
Query: 794 PWNCPHGRPTM 804
P++CPHGRP +
Sbjct: 708 PYSCPHGRPVL 718
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 49/68 (72%)
Query: 6 PTNSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQV 65
P ++ I +++ V RI AG+V++ +SAVKELVENSLDA A+S+++ ++E G E +V
Sbjct: 8 PQDATEIHELDEDTVARIAAGEVVERPASAVKELVENSLDADASSVDVTVEEGGTELIRV 67
Query: 66 VDNGCGIS 73
D+G G++
Sbjct: 68 ADDGHGMT 75
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 55/133 (41%), Gaps = 20/133 (15%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSC-----KVEGFLSKPGQGSGRNLG 165
V T G L+ ++ V+G + + + PV D V G +S P N
Sbjct: 208 VFSTTGQGDLQAAVLAVYGREVASSMIPVDADGDDLPPGPLESVSGLVSHPET----NRS 263
Query: 166 DRQYF--FVNDRPVDLPKVSKLVNELYKGANSRQ-----YPIAIMNFIVPTRACDVNVTP 218
R Y +VN R V + V E GA Q YP + VP A DVNV P
Sbjct: 264 SRDYLATYVNGRAV----TADAVREGIMGAYGTQLGGDRYPFVTLFLAVPGDAVDVNVHP 319
Query: 219 DKRKVFFSDECSI 231
KR+V F D+ ++
Sbjct: 320 RKREVRFDDDDAV 332
>gi|303228550|ref|ZP_07315378.1| DNA mismatch repair protein, C-terminal domain protein [Veillonella
atypica ACS-134-V-Col7a]
gi|302516797|gb|EFL58711.1| DNA mismatch repair protein, C-terminal domain protein [Veillonella
atypica ACS-134-V-Col7a]
Length = 652
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 86/187 (45%), Gaps = 21/187 (11%)
Query: 620 IGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQST-VLNQQPLLRPLKLDLTPEEEV 678
+GQ +I+ K DL+I+DQHAA E+ ++RL +S+ + Q LL P + T +E
Sbjct: 470 MGQVASCYILAKKGDDLYIIDQHAAHERVRYDRLCKSSEAIPMQSLLVPTYSNATEDEMN 529
Query: 679 VASMHMDIIRKNGFSLEEDPHALAGL-RFRLKAVPFSKKITFGVEDVKDLISTLADNQGE 737
+ D + GF +E L G + +L P DL+ + A Q
Sbjct: 530 LVENEQDALLDLGFEVE-----LGGPNQIKLVGAPV------------DLVESKA--QEI 570
Query: 738 CSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNC 797
S + ++ D MLA +CR +I G L +M ++E L + P+ C
Sbjct: 571 LSYVFTFLHDHEQPTKAQLRHEMLAYASCRGAIKSGHNLNMYQMTTLIEDLFHTDKPYVC 630
Query: 798 PHGRPTM 804
PHGRPT+
Sbjct: 631 PHGRPTI 637
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 61/113 (53%), Gaps = 20/113 (17%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
TI +++ +++I AG+V++ +S VKEL+ENS+DAGATSIE+ + E G + ++ DNG
Sbjct: 3 TIHVLDETTINKIAAGEVVERPASVVKELIENSIDAGATSIEVEIGEGGSAYMRITDNGE 62
Query: 71 GISPNNFKVRAV--------------------FLCQAYALIAKGVRFVCTNTT 103
G++ + ++ + F +A A IA FV T T
Sbjct: 63 GMTEEDARLAVLRHATSKIQNVEDLFDIASLGFRGEALASIASVSHFVLTTRT 115
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 78/165 (47%), Gaps = 17/165 (10%)
Query: 110 VVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQY 169
V + T G+ ++D + ++G N + P+A +S+ +EG +SKP + Q
Sbjct: 195 VAIITPGTGPIQDTVAALYGYKTKNDIFPIA-YESEHIYIEGVVSKPTLLKSTRIW--QT 251
Query: 170 FFVNDRPVDLPKVSKLVNELYKGANSRQ-YPIAIMNFIVPTRACDVNVTPDKRKVFFSDE 228
VN+R + + K ++ Y + YP+ +++ VP D+NV P K +V F D+
Sbjct: 252 IIVNNRVISDKTILKAIDNAYHALLPKSGYPLVLLHITVPASMVDINVHPRKSEVKFEDD 311
Query: 229 --------CSILHALREGLQEIYSPNNASYSVNKVEQLIEPEKSG 265
+IL+AL L E Y ++S++ Q +E E G
Sbjct: 312 KIIFKAVYHAILNALNNPLHERYERESSSFT-----QPLETESQG 351
>gi|303232202|ref|ZP_07318905.1| DNA mismatch repair protein, C-terminal domain protein [Veillonella
atypica ACS-049-V-Sch6]
gi|302513308|gb|EFL55347.1| DNA mismatch repair protein, C-terminal domain protein [Veillonella
atypica ACS-049-V-Sch6]
Length = 652
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 86/187 (45%), Gaps = 21/187 (11%)
Query: 620 IGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQST-VLNQQPLLRPLKLDLTPEEEV 678
+GQ +I+ K DL+I+DQHAA E+ ++RL +S+ + Q LL P + T +E
Sbjct: 470 MGQVASCYILAKKGDDLYIIDQHAAHERVRYDRLCKSSEAIPMQSLLVPTYSNATEDEMN 529
Query: 679 VASMHMDIIRKNGFSLEEDPHALAGL-RFRLKAVPFSKKITFGVEDVKDLISTLADNQGE 737
+ D + GF +E L G + +L P DL+ + A Q
Sbjct: 530 LVENEQDALLDLGFEVE-----LGGPNQIKLVGAPV------------DLVESKA--QEI 570
Query: 738 CSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNC 797
S + ++ D MLA +CR +I G L +M ++E L + P+ C
Sbjct: 571 LSYVFTFLHDHEQPTKAQLRHEMLAYASCRGAIKSGHNLNMYQMTTLIEDLFHTDKPYVC 630
Query: 798 PHGRPTM 804
PHGRPT+
Sbjct: 631 PHGRPTI 637
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 61/113 (53%), Gaps = 20/113 (17%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
TI +++ +++I AG+V++ +S VKEL+ENS+DAGATSIE+ + E G + ++ DNG
Sbjct: 3 TIHVLDETTINKIAAGEVVERPASVVKELIENSIDAGATSIEVEIGEGGSAYMRITDNGK 62
Query: 71 GISPNNFKVRAV--------------------FLCQAYALIAKGVRFVCTNTT 103
G++ + ++ + F +A A IA FV T T
Sbjct: 63 GMTEEDARLAVLRHATSKIQNVEDLFDIASLGFRGEALASIASVSHFVLTTRT 115
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 80/165 (48%), Gaps = 17/165 (10%)
Query: 110 VVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQY 169
V + T GSSS++D + ++G N + P+A +S+ +EG +SKP + Q
Sbjct: 195 VAIITPGSSSIQDTVAALYGYKTKNDIFPIA-YESEHIYIEGVVSKPTLLKSTRIW--QT 251
Query: 170 FFVNDRPVDLPKVSKLVNELYKGANSRQ-YPIAIMNFIVPTRACDVNVTPDKRKVFFSDE 228
VN+R + + K ++ Y + YP+ +++ VP D+NV P K +V F D+
Sbjct: 252 IIVNNRVISDKTILKAIDNAYHALLPKSGYPLVLLHITVPASMVDINVHPRKSEVKFEDD 311
Query: 229 --------CSILHALREGLQEIYSPNNASYSVNKVEQLIEPEKSG 265
+IL+AL L E Y ++S++ Q +E E G
Sbjct: 312 KIIFKAVYHAILNALNNPLHERYERESSSFT-----QPLETESQG 351
>gi|160892635|ref|ZP_02073425.1| hypothetical protein CLOL250_00165 [Clostridium sp. L2-50]
gi|156865676|gb|EDO59107.1| DNA mismatch repair domain protein [Clostridium sp. L2-50]
Length = 681
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 91/192 (47%), Gaps = 21/192 (10%)
Query: 616 RMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERL---SQSTVLNQQPLLRPLKLDL 672
+ ++IGQ + + + + FI+DQHAA EK FE L ++ Q L+ P + L
Sbjct: 492 KHRIIGQLFKTYWLIEYEDKFFIMDQHAAHEKVKFEELMANYKNKTAIPQYLMPPAIVSL 551
Query: 673 TPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLA 732
+ E +++ + GF +E G ++L AVP + G E + I L+
Sbjct: 552 SGTESEFLRENLEFFQNLGFQIE----GFGGKEYKLSAVPANLFGLDGRELFLEFIGELS 607
Query: 733 DNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLN 792
+N G+ I ++ + L++ AC+++I ++ E +++ L L
Sbjct: 608 EN-GQKQTIDTF-------------ISKLSTMACKAAIKGNTSISFKEADTLIDQLMKLE 653
Query: 793 SPWNCPHGRPTM 804
+P+ CPHGRPT+
Sbjct: 654 NPYTCPHGRPTL 665
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 51/76 (67%), Gaps = 2/76 (2%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ +++ + +I AG+VI+ S +KELVENS+DAGAT+I I +KE G + ++ DNGCG
Sbjct: 2 IKLLDQYTIDKIAAGEVIERPGSVIKELVENSIDAGATAITIEIKEGGMSFIRITDNGCG 61
Query: 72 ISPNNFKVRAVFLCQA 87
IS +V FL A
Sbjct: 62 ISKE--EVPVAFLRHA 75
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 63/119 (52%), Gaps = 6/119 (5%)
Query: 112 LKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSG-RNLGDRQYF 170
L T G+ LK+ I ++G +I N L + +D K+ G+L+KP G R+ D +
Sbjct: 195 LFTSGNGRLKEIIYHIYGRDITNNLLEIN-AANDQVKITGYLAKPSISRGNRSFED---Y 250
Query: 171 FVNDRPVDLPKVSKLVNELYKG-ANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDE 228
+VN R + ++K + + Y+ ++P ++NF + DVN+ P KR++ F +E
Sbjct: 251 YVNQRYIKSNILTKAIEDAYRTFVMVHKFPFTVINFEIDPSLIDVNIHPAKRELKFINE 309
>gi|311748627|ref|ZP_07722412.1| DNA mismatch repair protein MutL [Algoriphagus sp. PR1]
gi|126577153|gb|EAZ81401.1| DNA mismatch repair protein MutL [Algoriphagus sp. PR1]
Length = 616
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 101/201 (50%), Gaps = 28/201 (13%)
Query: 9 SPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDN 68
S I+ + + ++I AG+V++ +SA+KEL+ENS+D+GAT I++ +K+ G++ QV+DN
Sbjct: 2 SDVIQLLPDAIANQIAAGEVVQRPASALKELLENSIDSGATKIQVVVKDAGKQLIQVIDN 61
Query: 69 GCGISPNNFKVRAVFLCQAYALIAKGVRFVCTNTTG---------KNVKSVVLKTQGSSS 119
G G+SP + R F A + I T G V V LKT+ +++
Sbjct: 62 GKGMSPTD--ARMSFERHATSKIRSSKDLFSIRTFGFRGEALASIAAVAQVELKTKPANA 119
Query: 120 LKDNIITVFGMNIYNCLEPVAICKSDS-CKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVD 178
+I + G I N EP+A + S C F + P + RN F+ PV+
Sbjct: 120 DLGTLIQIEGSEIKNQ-EPIAATEGTSVCMKNLFFNVPAR---RN-------FLKSNPVE 168
Query: 179 LPKVSKLVNELYKGANSRQYP 199
+ LV+E + A S YP
Sbjct: 169 M---RHLVDEFQRVALS--YP 184
Score = 52.4 bits (124), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 76/154 (49%), Gaps = 15/154 (9%)
Query: 120 LKDNIITVFGMNIYNCLEPVAICK--SDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPV 177
L I+ +FG N L P C+ + ++G++ KP + + + G+ Q+FFVN+R +
Sbjct: 205 LSQRIVGLFGKNYQGQLVP---CEELTPHINIKGYIGKP-ENAKKTRGE-QFFFVNNRYI 259
Query: 178 DLPKVSKLVNELYKG-ANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALR 236
++ V+ ++G S Q+P ++ + D+NV P K ++ F DE ++ +R
Sbjct: 260 KSSYLNHAVSNAFEGLIQSDQHPFYVLFLEIDPSHIDINVHPTKTEIKFDDERTVYAVIR 319
Query: 237 EGLQEIYSPNNA------SYSVNKVEQLIE-PEK 263
+++ ++ S+ VN E + PEK
Sbjct: 320 SAVKQALGAHHVVPSLDFSFDVNYTENWDKNPEK 353
>gi|429759391|ref|ZP_19291890.1| DNA mismatch repair protein [Veillonella atypica KON]
gi|429179667|gb|EKY20906.1| DNA mismatch repair protein [Veillonella atypica KON]
Length = 652
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 86/187 (45%), Gaps = 21/187 (11%)
Query: 620 IGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQST-VLNQQPLLRPLKLDLTPEEEV 678
+GQ +I+ K DL+I+DQHAA E+ ++RL +S+ + Q LL P + T +E
Sbjct: 470 MGQVASCYILAKKGDDLYIIDQHAAHERVRYDRLCKSSEAIPMQSLLVPTYSNATEDEMN 529
Query: 679 VASMHMDIIRKNGFSLEEDPHALAGL-RFRLKAVPFSKKITFGVEDVKDLISTLADNQGE 737
+ D + GF +E L G + +L P DL+ + A Q
Sbjct: 530 LVENEQDALLDLGFEVE-----LGGPNQIKLVGAPV------------DLVESKA--QEI 570
Query: 738 CSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNC 797
S + ++ D MLA +CR +I G L +M ++E L + P+ C
Sbjct: 571 LSYVFTFLHDHEQPTKAQLRHEMLAYASCRGAIKSGHNLNMYQMTTLIEDLFHTDKPYVC 630
Query: 798 PHGRPTM 804
PHGRPT+
Sbjct: 631 PHGRPTI 637
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 50/69 (72%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
TI +++ +++I AG+V++ +S VKEL+ENS+DAGATSIE+ + E G + ++ DNG
Sbjct: 3 TIHVLDETTINKIAAGEVVERPASVVKELIENSIDAGATSIEVEIGEGGSAYMRITDNGK 62
Query: 71 GISPNNFKV 79
G++ + ++
Sbjct: 63 GMTEEDARL 71
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 79/165 (47%), Gaps = 17/165 (10%)
Query: 110 VVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQY 169
V + T G+ S++D + ++G N + P+A +S+ +EG +SKP + Q
Sbjct: 195 VAIITPGTGSIQDTVAALYGYKTKNDIFPIA-YESEHIYIEGVVSKPTLLKSTRIW--QT 251
Query: 170 FFVNDRPVDLPKVSKLVNELYKGANSRQ-YPIAIMNFIVPTRACDVNVTPDKRKVFFSDE 228
VN+R + + K ++ Y + YP+ +++ VP D+NV P K +V F D+
Sbjct: 252 IIVNNRVISDKTILKAIDNAYHALLPKSGYPLVLLHITVPASMVDINVHPRKSEVKFEDD 311
Query: 229 --------CSILHALREGLQEIYSPNNASYSVNKVEQLIEPEKSG 265
+IL+AL L E Y ++S++ Q +E E G
Sbjct: 312 KIIFKAVYHAILNALNNPLHERYERESSSFT-----QPLETESQG 351
>gi|336375232|gb|EGO03568.1| hypothetical protein SERLA73DRAFT_165231 [Serpula lacrymans var.
lacrymans S7.3]
gi|336388244|gb|EGO29388.1| hypothetical protein SERLADRAFT_445211 [Serpula lacrymans var.
lacrymans S7.9]
Length = 700
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 56/86 (65%), Gaps = 5/86 (5%)
Query: 1 MDVETPTNSPTIRP-----INKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIAL 55
MD E ++SP + P + + V++RI AG++I +SA+KEL+ENSLDAG+TSI + +
Sbjct: 1 MDTERRSSSPELEPQPIHRLQEAVINRIAAGEIIHRPASALKELIENSLDAGSTSIRVTV 60
Query: 56 KEYGEEWFQVVDNGCGISPNNFKVRA 81
KE G + Q+ DNG GI + + A
Sbjct: 61 KEGGMKLLQIQDNGSGIRKADLPILA 86
Score = 47.0 bits (110), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 51/99 (51%), Gaps = 5/99 (5%)
Query: 170 FFVNDRPVDLPKVSKLVNELYKGANSR-QYPIAIMNFIVPTRACDVNVTPDKRKVFFSDE 228
F+N R V+ ++ + + +Y G + P ++ + R+ DVNV P KR+V F DE
Sbjct: 292 LFINHRLVESSRIKRSIESVYSGVLPKGASPFVYLSLEIDPRSVDVNVHPTKREVHFLDE 351
Query: 229 CSILHALREGLQEIYSPNNAS----YSVNKVEQLIEPEK 263
+I+ + + +Q+ + + S Y V +L EP+K
Sbjct: 352 EAIMEKIADAIQKTLAGQSQSRIFEYQVISSSRLGEPKK 390
>gi|313888302|ref|ZP_07821973.1| DNA mismatch repair protein, C-terminal domain protein
[Peptoniphilus harei ACS-146-V-Sch2b]
gi|312845705|gb|EFR33095.1| DNA mismatch repair protein, C-terminal domain protein
[Peptoniphilus harei ACS-146-V-Sch2b]
Length = 624
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 89/175 (50%), Gaps = 22/175 (12%)
Query: 633 DQDLFIVDQHAADEKYNFERLSQSTV---LNQQPLLRPLKLDLTPEEEVVASMHMDIIRK 689
D +F+VDQHAA E+ N+E+ + + ++ Q L++P ++L E ++D+ K
Sbjct: 454 DGKVFVVDQHAAHERVNYEKFLKMYLNSEISSQILIKPEIIELNQLEYDKILNYIDLFTK 513
Query: 690 NGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTA 749
GF +E+ L+ VP + V ++D+I +L + I S+Y+ D
Sbjct: 514 LGFKIED----FGDRSVVLREVPMIFGLPTYVNFIRDIIDSL-----DKEISSNYEADLY 564
Query: 750 DSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTM 804
+ +AC++S+ GD L E++ +++ L + +P+ CPHGRPT+
Sbjct: 565 K----------IMRKACKASVKAGDDLSDIEIEALIKDLKNCENPYTCPHGRPTI 609
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 46/68 (67%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR +++ + +I AG++I++ +S VKELVENS+DAGA I + L+ ++ +V DNG G
Sbjct: 2 IRLLDEQTISKIAAGEIIENSASIVKELVENSIDAGADDILVELRGESTDYIKVSDNGSG 61
Query: 72 ISPNNFKV 79
S + ++
Sbjct: 62 FSEEDLEL 69
Score = 49.3 bits (116), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 75/167 (44%), Gaps = 15/167 (8%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICK 143
+ Q AL ++F GK +L T + I ++ G I + L + +
Sbjct: 172 IVQKIALSNNNIKFTLI-RDGK----TILNTGNDKDPINRIFSILGSEIASSLNEGSF-E 225
Query: 144 SDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANS----RQYP 199
S++ K+ GF S R+ D QY FVN R + +S+ V K NS +YP
Sbjct: 226 SENYKIRGFFS--DNKLFRSNRDSQYIFVNGRFIRDINISRAVE---KNYNSLIPLNRYP 280
Query: 200 IAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPN 246
+ I+ + + DVN+ P K ++ S+E + L E ++E+ PN
Sbjct: 281 VFILYIDIDPKLIDVNIHPKKNEIKISNENILTALLSEVVEEVIYPN 327
>gi|448582423|ref|ZP_21645927.1| DNA mismatch repair protein MutL [Haloferax gibbonsii ATCC 33959]
gi|445732071|gb|ELZ83654.1| DNA mismatch repair protein MutL [Haloferax gibbonsii ATCC 33959]
Length = 748
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 92/194 (47%), Gaps = 24/194 (12%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLN--QQPLLRPLKLDLTP 674
M++IGQ +I+ + + L +VDQHAADE+ N+ERL + Q L P++L+LT
Sbjct: 547 MRIIGQLADTYIVAETGEGLVLVDQHAADERVNYERLKGEVEGDTPTQALAEPVELELTA 606
Query: 675 EEEVVASMHMDIIRKNGFSLEEDPHA-LAGLR-FRLKAVP--FSKKITFGVEDVKDLIST 730
E + + + + + GF HA G R ++ VP F + G+ ++D ++
Sbjct: 607 REAALFEEYREALAQVGF------HAGRTGERTVSVRTVPAVFDAALDPGL--LRDALTA 658
Query: 731 LADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLAD 790
+ + T D+V +L+ AC SI +L + +L L D
Sbjct: 659 FVREEADGG------RKTVDAVADE----LLSDLACYPSITGNTSLREGSVLDLLAALDD 708
Query: 791 LNSPWNCPHGRPTM 804
+P+ CPHGRP +
Sbjct: 709 CENPYACPHGRPVI 722
Score = 56.6 bits (135), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 45/68 (66%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ +++ + RI AG+V++ +S VKEL ENSLDA AT I +A+ G E ++ D+G G
Sbjct: 4 IKQLDEKTIQRIAAGEVVERPASVVKELFENSLDADATRISVAVDAGGVEGVRIRDDGVG 63
Query: 72 ISPNNFKV 79
++ + ++
Sbjct: 64 MNEEDLEL 71
Score = 56.2 bits (134), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 4/122 (3%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYF 170
V T+G L+ +++V+G + + PV + V G +S P + R+ D
Sbjct: 197 VFATEGRGDLQSTVLSVYGREVAESMVPVD-RDAPGVSVSGLVSHPE--TTRSTRDYLST 253
Query: 171 FVNDRPVDLPKVSKLVNELYKGA-NSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDEC 229
FVNDR V + + V + Y G ++ +YP A++ V A DVNV P K +V + DE
Sbjct: 254 FVNDRYVTDRVLREAVLDAYGGQLDADRYPFAVLFVEVAADAVDVNVHPRKMEVRWDDEA 313
Query: 230 SI 231
+
Sbjct: 314 GV 315
>gi|392562456|gb|EIW55636.1| DNA mismatch repair protein MutL [Trametes versicolor FP-101664
SS1]
Length = 770
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 58/97 (59%), Gaps = 1/97 (1%)
Query: 15 INKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISP 74
+ + V++RI AG++I +SA+KEL+ENSLDAGATSI++ +KE G + Q+ DNGCGI
Sbjct: 23 LQESVINRIAAGEIIHRPASALKELIENSLDAGATSIKVTVKEGGMKLLQIQDNGCGIRK 82
Query: 75 NNFKVRA-VFLCQAYALIAKGVRFVCTNTTGKNVKSV 110
+ + A F A A R G+ + S+
Sbjct: 83 EDLPILAERFTTSKLATFADLSRLTTYGFRGEALASI 119
Score = 42.4 bits (98), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 170 FFVNDRPVDLPKVSKLVNELYKGANSR-QYPIAIMNFIVPTRACDVNVTPDKRKVFFSDE 228
F+N R V+ ++ + + +Y G ++ P ++ + R+ DVNV P K++V F DE
Sbjct: 301 LFINHRLVEASRIKRALEAVYNGVLAKGAAPFVYLSLQIDPRSVDVNVHPTKKEVHFLDE 360
Query: 229 CSILHALREGLQE 241
+I+ + + +Q+
Sbjct: 361 DAIIERIADVVQD 373
>gi|224476433|ref|YP_002634039.1| DNA mismatch repair protein [Staphylococcus carnosus subsp.
carnosus TM300]
gi|254766175|sp|B9DPC0.1|MUTL_STACT RecName: Full=DNA mismatch repair protein MutL
gi|222421040|emb|CAL27854.1| putative DNA mismatch repair protein MutL [Staphylococcus carnosus
subsp. carnosus TM300]
Length = 646
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 95/192 (49%), Gaps = 23/192 (11%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADE--KYNFERLSQSTVLNQ-QPLLRPLKLDLT 673
M+V+GQ + +II + + +F++DQHAA E KY + R V N+ Q LL P+ +
Sbjct: 458 MEVVGQVHGTYIIAQNETGMFMIDQHAAQERIKYEYFRDKIGEVTNEVQNLLIPMTFHFS 517
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
+E+++ + + D + K G LE + + + P + F E+ +++I + +
Sbjct: 518 KDEQMIINQYKDELDKVGVHLE----PFGSHDYIVNSYP----VWFPKEEAQEIIQDMVE 569
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLA-SRACRSSIMIGDALGRNEMQKILEHLADLN 792
++ K+D ++R A +C+ SI L +EM +++ L ++
Sbjct: 570 -----YVLEHRKVDI------KKIREEAAIMMSCKKSIKANHYLRNHEMADLIDQLREME 618
Query: 793 SPWNCPHGRPTM 804
P+ CPHGRP +
Sbjct: 619 DPFTCPHGRPII 630
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 46/68 (67%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ + + ++I AG+V++ S VKEL+EN+LDA AT I I +K+ G E +VVDNG G
Sbjct: 4 IKELQTSLANKIAAGEVVERPGSVVKELLENALDAKATEINIEIKQSGIESIRVVDNGTG 63
Query: 72 ISPNNFKV 79
I ++ K+
Sbjct: 64 IEEDDLKL 71
Score = 51.6 bits (122), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 83/186 (44%), Gaps = 21/186 (11%)
Query: 89 ALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCK 148
A+ VRF T+ V++KT GS + + ++GM + L + SD
Sbjct: 178 AMSHPNVRFTLTSD-----DKVLIKTNGSGRTNEVMAEIYGMKVAKDLVHITGDTSD-YH 231
Query: 149 VEGFLSKPGQGSGRNLGDRQYF--FVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNF 205
+EG+++KP +R Y F+N R + ++K + E Y + +YPI +N
Sbjct: 232 LEGYVAKPEHSRS----NRHYISIFINGRYIKNFVLNKAIVEGYHTLLTIGRYPICYINI 287
Query: 206 IVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYS-----PNNAS---YSVNKVEQ 257
+ DVNV P K +V S E + + + +QE + P+N Y NKV
Sbjct: 288 EMDPILVDVNVHPTKLEVRLSKEEQLYQLIVQKIQEAFKDKILIPHNDENKLYKKNKVLD 347
Query: 258 LIEPEK 263
+ E +K
Sbjct: 348 VFEQQK 353
>gi|448300084|ref|ZP_21490088.1| DNA mismatch repair protein MutL [Natronorubrum tibetense GA33]
gi|445586431|gb|ELY40711.1| DNA mismatch repair protein MutL [Natronorubrum tibetense GA33]
Length = 740
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 93/191 (48%), Gaps = 18/191 (9%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLN--QQPLLRPLKLDLTP 674
++V+GQ + +++ + + L ++DQHAADE+ N+ERL ++ + Q L P++L+LT
Sbjct: 544 LRVLGQLDDTYLVCETEDGLALIDQHAADERVNYERLQRAFADDPAAQALASPVELELTA 603
Query: 675 EEEVVASMHMDIIRKNGFSLEE-DPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
E + + + + GF + D +A + VP + T E V+D++++ +
Sbjct: 604 VEAEAFESYREALSRLGFYADRTDDRTVA-----VTTVPAVLEETLEPERVRDVLASFLE 658
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNS 793
E +T D++ L AC SI +L + +L L D +
Sbjct: 659 GDRESG------AETIDALADE----FLGDLACYPSITGNTSLTEGSVVDLLAALDDCEN 708
Query: 794 PWNCPHGRPTM 804
P+ CPHGRP +
Sbjct: 709 PYACPHGRPVI 719
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
Query: 3 VETPTNSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEW 62
ETP ++ IR +++ V RI AG+V++ +SAVKEL+ENSLDA A ++++ ++E G E
Sbjct: 2 TETPPDT-DIRQLDENTVARIAAGEVVERPASAVKELLENSLDADADTVDVTVEEGGTEL 60
Query: 63 FQVVDNGCGI 72
+V D+G G+
Sbjct: 61 IRVADDGRGM 70
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.131 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,511,985,020
Number of Sequences: 23463169
Number of extensions: 530332419
Number of successful extensions: 1437991
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5209
Number of HSP's successfully gapped in prelim test: 362
Number of HSP's that attempted gapping in prelim test: 1416693
Number of HSP's gapped (non-prelim): 15966
length of query: 824
length of database: 8,064,228,071
effective HSP length: 151
effective length of query: 673
effective length of database: 8,816,256,848
effective search space: 5933340858704
effective search space used: 5933340858704
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 81 (35.8 bits)