BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041466
(824 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P54278|PMS2_HUMAN Mismatch repair endonuclease PMS2 OS=Homo sapiens GN=PMS2 PE=1 SV=2
Length = 862
Score = 216 bits (551), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 133/319 (41%), Positives = 183/319 (57%), Gaps = 43/319 (13%)
Query: 501 IVSSSNDLKK--NSEDLSVAASHLQFSGSILDAPVPSSSLDICSTLQFSIQDLRKRRQQR 558
I+SSS+ +K N++D+S AS + + I VP L FS+ L KR +Q
Sbjct: 584 ILSSSDICQKLVNTQDMS--ASQVDVAVKINKKVVP---------LDFSMSSLAKRIKQ- 631
Query: 559 LSIMQSSCHTSGSVKMRRCFAAATLELSQPENEERKARALAAATTELERLFRKEDFGRMK 618
+ + + G R+ A ++ EN+ AA EL + K F M+
Sbjct: 632 --LHHEAQQSEGEQNYRKFRA----KICPGENQ--------AAEDELRKEISKTMFAEME 677
Query: 619 VIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEEEV 678
+IGQFNLGFII KL++D+FIVDQHA DEKYNFE L Q TVL Q L+ P L+LT E
Sbjct: 678 IIGQFNLGFIITKLNEDIFIVDQHATDEKYNFEMLQQHTVLQGQRLIAPQTLNLTAVNEA 737
Query: 679 VASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGEC 738
V +++I RKNGF D +A R +L ++P SK TFG +DV +LI L+D+ G
Sbjct: 738 VLIENLEIFRKNGFDFVIDENAPVTERAKLISLPTSKNWTFGPQDVDELIFMLSDSPG-- 795
Query: 739 SIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNC 797
+C PSRV+ M ASRACR S+MIG AL +EM+K++ H+ +++ PWNC
Sbjct: 796 ------------VMCRPSRVKQMFASRACRKSVMIGTALNTSEMKKLITHMGEMDHPWNC 843
Query: 798 PHGRPTMRHLVDLTTIRKN 816
PHGRPTMRH+ +L I +N
Sbjct: 844 PHGRPTMRHIANLGVISQN 862
Score = 123 bits (308), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 68/181 (37%), Positives = 100/181 (55%), Gaps = 17/181 (9%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP- 138
+ V + AY +I+ G+R CTN G+ + V+ T GS S+K+NI +VFG L P
Sbjct: 183 KMVQVLHAYCIISAGIRVSCTNQLGQGKRQPVVCTGGSPSIKENIGSVFGQKQLQSLIPF 242
Query: 139 VAICKSDS-CK---------------VEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKV 182
V + SDS C+ + GF+S+ G GR+ DRQ+FF+N RP D KV
Sbjct: 243 VQLPPSDSVCEEYGLSCSDALHNLFYISGFISQCTHGVGRSSTDRQFFFINRRPCDPAKV 302
Query: 183 SKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEI 242
+LVNE+Y N QYP ++N V + D+NVTPDKR++ +E +L L+ L +
Sbjct: 303 CRLVNEVYHMYNRHQYPFVVLNISVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLIGM 362
Query: 243 Y 243
+
Sbjct: 363 F 363
Score = 91.3 bits (225), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 55/67 (82%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+PI++ VH+IC+GQV+ LS+AVKELVENSLDAGAT+I++ LK+YG + +V DNGCG
Sbjct: 15 IKPIDRKSVHQICSGQVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSDNGCG 74
Query: 72 ISPNNFK 78
+ NF+
Sbjct: 75 VEEENFE 81
>sp|P54279|PMS2_MOUSE Mismatch repair endonuclease PMS2 OS=Mus musculus GN=Pms2 PE=1 SV=1
Length = 859
Score = 216 bits (551), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 119/274 (43%), Positives = 160/274 (58%), Gaps = 30/274 (10%)
Query: 544 LQFSIQDLRKRRQQRLSIMQSSCHTSGSVKMRRCFAAATLELSQPENEERKARALAAATT 603
L+FS+ L KR +Q + + H K R ++ EN+ AA
Sbjct: 615 LEFSLSSLAKRMKQLQHLKAQNKHELSYRKFR-------AKICPGENQ--------AAED 659
Query: 604 ELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQP 663
EL + K F M+++GQFNLGFI+ KL +DLF+VDQHAADEKYNFE L Q TVL Q
Sbjct: 660 ELRKEISKSMFAEMEILGQFNLGFIVTKLKEDLFLVDQHAADEKYNFEMLQQHTVLQAQR 719
Query: 664 LLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVED 723
L+ P L+LT E V +++I RKNGF D A R +L ++P SK TFG +D
Sbjct: 720 LITPQTLNLTAVNEAVLIENLEIFRKNGFDFVIDEDAPVTERAKLISLPTSKNWTFGPQD 779
Query: 724 VKDLISTLADNQGECSIISSYKMDTADSVC-PSRVRAMLASRACRSSIMIGDALGRNEMQ 782
+ +LI L+D+ G +C PSRVR M ASRACR S+MIG AL +EM+
Sbjct: 780 IDELIFMLSDSPG--------------VMCRPSRVRQMFASRACRKSVMIGTALNASEMK 825
Query: 783 KILEHLADLNSPWNCPHGRPTMRHLVDLTTIRKN 816
K++ H+ +++ PWNCPHGRPTMRH+ +L I +N
Sbjct: 826 KLITHMGEMDHPWNCPHGRPTMRHVANLDVISQN 859
Score = 89.4 bits (220), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 56/71 (78%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+PI+ VH+IC+GQVI LS+AVKEL+ENS+DAGAT+I++ LK+YG + +V DNGCG
Sbjct: 15 IKPIDGKSVHQICSGQVILSLSTAVKELIENSVDAGATTIDLRLKDYGVDLIEVSDNGCG 74
Query: 72 ISPNNFKVRAV 82
+ NF+ A+
Sbjct: 75 VEEENFEGLAL 85
Score = 81.3 bits (199), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 89/194 (45%), Gaps = 21/194 (10%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEP- 138
+ V + QAY +I+ GVR CTN G+ + V+ T G+S +K+NI +VFG L P
Sbjct: 183 KMVQVLQAYCIISAGVRVSCTNQLGQGKRHAVVCTSGTSGMKENIGSVFGQKQLQSLIPF 242
Query: 139 VAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDR------------------PVDLP 180
V + SD+ E LS G+ + + F + R PV
Sbjct: 243 VQLPPSDAVCEEYGLSTSGR--HKTFSTFRASFHSARTAPGGVQQTGSFSSSIRGPVTQQ 300
Query: 181 KVSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQ 240
+ L Y N QYP ++N V + D+NVTPDKR++ +E +L L+ L
Sbjct: 301 RSLSLSMRFYHMYNRHQYPFVVLNVSVDSECVDINVTPDKRQILLQEEKLLLAVLKTSLI 360
Query: 241 EIYSPNNASYSVNK 254
++ + +VN+
Sbjct: 361 GMFDSDANKLNVNQ 374
>sp|Q54QA0|PMS1_DICDI Mismatch repair endonuclease pms1 OS=Dictyostelium discoideum GN=pms1
PE=3 SV=1
Length = 1022
Score = 201 bits (511), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 111/245 (45%), Positives = 151/245 (61%), Gaps = 15/245 (6%)
Query: 570 GSVKMRRCFAAATLELSQPENEERKARALAAATTELERLFRKEDFGRMKVIGQFNLGFII 629
G + ++ AAT SQ + + + A EL + F+KE F +M VIGQFNLGFII
Sbjct: 768 GGIGAKQQQKAATQVTSQLQQQPSQTNQ-KTAEEELTKFFKKEYFKQMIVIGQFNLGFII 826
Query: 630 GKLDQDLFIVDQHAADEKYNFERLSQS--TVLNQQPLLRPLKL-DLTPEEEVVASMHMDI 686
KL DLFI+DQHAADEKYNFE LS+S + +N QPLL+P L DLT EEE++ ++D+
Sbjct: 827 AKLGNDLFIIDQHAADEKYNFEILSKSVESSINSQPLLKPDTLSDLTSEEELIIIENVDL 886
Query: 687 IRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKM 746
+KNGF D A + +L A P +FG++D+ + I + E SI S
Sbjct: 887 FKKNGFKFIIDHDAPTRFKIKLSAFPIIHGQSFGIKDIYEWIFMIK----ESSIPGSVNK 942
Query: 747 DTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTMRH 806
P R+ ++LAS+ACR SIM+G L EM+ +L +L+ L++PW CPHGRPTMRH
Sbjct: 943 ------IP-RLNSLLASKACRKSIMVGTTLTHKEMKDVLNNLSTLDNPWCCPHGRPTMRH 995
Query: 807 LVDLT 811
LVDL+
Sbjct: 996 LVDLS 1000
Score = 121 bits (304), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/217 (33%), Positives = 105/217 (48%), Gaps = 44/217 (20%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICK 143
+ QAYALI+ R C N GK+ +S VL T S+++DN+I VFG + L+
Sbjct: 174 ILQAYALISTNTRITCYNQAGKSPRSCVLSTTSGSTIRDNLINVFGTKMSQSLD--EFTA 231
Query: 144 SDSC-KVEGFLSKPGQGSG----------------------------------------R 162
SDS KV G +SK G GSG R
Sbjct: 232 SDSLFKVNGLISKIGIGSGTGQSISNSSSSSSQSSSQLSSSSSSSSSSQSSQLSIGSLSR 291
Query: 163 NLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSR-QYPIAIMNFIVPTRACDVNVTPDKR 221
+ DRQ+FFVN RP + K++K +N LY+ + R YP+ I N +PT DVNVTPDKR
Sbjct: 292 SCADRQFFFVNSRPFEHSKLAKEINSLYQSFHKRGSYPVVIFNIEMPTNNYDVNVTPDKR 351
Query: 222 KVFFSDECSILHALREGLQEIYSPNNASYSVNKVEQL 258
+F E +L + +GL+ ++ + + N++ Q
Sbjct: 352 TIFIQKEQQLLLLITDGLKTMWETAQSVFDTNQLGQF 388
Score = 95.9 bits (237), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/66 (63%), Positives = 56/66 (84%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ I+K ++ IC+GQVI DLS AVKEL+ENS+DAGAT++EI LKEYGEE+ +V+DNG G
Sbjct: 2 IKAIDKESINNICSGQVIFDLSIAVKELIENSIDAGATTVEIRLKEYGEEFIEVIDNGSG 61
Query: 72 ISPNNF 77
+ P+NF
Sbjct: 62 VEPSNF 67
>sp|P54280|PMS1_SCHPO DNA mismatch repair protein pms1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=pms1 PE=3 SV=1
Length = 794
Score = 190 bits (483), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 96/203 (47%), Positives = 131/203 (64%), Gaps = 13/203 (6%)
Query: 611 KEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKL 670
K DF RM+V+GQFN GFI+ +LFI+DQHA+DEK+N+E L + V+N Q L+ P +L
Sbjct: 605 KADFLRMRVVGQFNRGFIVVVHGNNLFIIDQHASDEKFNYEHLKSNLVINSQDLVLPKRL 664
Query: 671 DLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIST 730
DL EE V H+D+IR+ GF + D + G R L +VP SK + F D+ ++IS
Sbjct: 665 DLAATEETVLIDHIDLIRRKGFGVAIDLNQRVGNRCTLLSVPTSKNVIFDTSDLLEIISV 724
Query: 731 LADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLAD 790
L+++ ++D SR+ MLAS+ACRSS+MIG AL +EM I+ HLA+
Sbjct: 725 LSEHP---------QIDP----FSSRLERMLASKACRSSVMIGRALTISEMNTIVRHLAE 771
Query: 791 LNSPWNCPHGRPTMRHLVDLTTI 813
L+ PWNCPHGRPTMRHL+ L I
Sbjct: 772 LSKPWNCPHGRPTMRHLLRLKDI 794
Score = 110 bits (274), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 107/197 (54%), Gaps = 10/197 (5%)
Query: 80 RAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPV 139
+A+ L QAYA I+ RF+ + T + K + L T + +K NI+ VFG + + L P
Sbjct: 173 KAISLLQAYATISTNKRFMVYHQTKNSGKLLQLSTNSNKDMKLNIMNVFGTKVSSSLIPW 232
Query: 140 AICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSRQYP 199
+ +EG++S+P GS R +RQ F+N R V+LPK+++++ E++K + Q P
Sbjct: 233 -----NDGIIEGYISRPHVGSTRASNERQMLFINRRLVNLPKIARVIQEVFKPYSMAQSP 287
Query: 200 IAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEIYSPNNASYSVNKVEQLI 259
+N + D+NV+PDK+ VF S+E SI+ ++ LQ + + S ++ + +
Sbjct: 288 FFAINLRITNGTIDINVSPDKKSVFLSEEDSIIEFIKNSLQNLCESCGHAISCSRSQSIF 347
Query: 260 E-----PEKSGPSSGAE 271
P+ SG S+ E
Sbjct: 348 SYSSQIPDSSGDSTDQE 364
Score = 90.5 bits (223), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 53/68 (77%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
T++PI+ VH+IC+GQVI D++SAVKELVENSLD+GAT+IEI K YG +VVDNG
Sbjct: 3 TVKPIDANTVHKICSGQVITDVASAVKELVENSLDSGATTIEIRFKNYGINSIEVVDNGS 62
Query: 71 GISPNNFK 78
GI +++
Sbjct: 63 GIDAGDYE 70
>sp|P14242|PMS1_YEAST DNA mismatch repair protein PMS1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=PMS1 PE=1 SV=3
Length = 873
Score = 180 bits (456), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 92/204 (45%), Positives = 131/204 (64%), Gaps = 14/204 (6%)
Query: 611 KEDFGRMKVIGQFNLGFII--GKLDQ--DLFIVDQHAADEKYNFERLSQSTVLNQQPLLR 666
K DF +M+V+GQFNLGFII K+D DLFIVDQHA+DEKYNFE L TV Q L+
Sbjct: 668 KNDFKKMEVVGQFNLGFIIVTRKVDNKYDLFIVDQHASDEKYNFETLQAVTVFKSQKLII 727
Query: 667 PLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKD 726
P ++L+ +E+V ++ + KNGF L+ D G R +L ++P SK+ F + D +
Sbjct: 728 PQPVELSVIDELVVLDNLPVFEKNGFKLKIDEEEEFGSRVKLLSLPTSKQTLFDLGDFNE 787
Query: 727 LISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILE 786
LI + ++ G D++ S++R+M A RACRSSIMIG L + M +++
Sbjct: 788 LIHLIKEDGGL----------RRDNIRCSKIRSMFAMRACRSSIMIGKPLNKKTMTRVVH 837
Query: 787 HLADLNSPWNCPHGRPTMRHLVDL 810
+L++L+ PWNCPHGRPTMRHL++L
Sbjct: 838 NLSELDKPWNCPHGRPTMRHLMEL 861
Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 94/183 (51%), Gaps = 22/183 (12%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAIC- 142
+ Q YA+I ++F N T K K+++L T +SS++ NI +VFG LE V +
Sbjct: 175 VIQGYAIINAAIKFSVWNITPKGKKNLILSTMRNSSMRKNISSVFGAGGMRGLEEVDLVL 234
Query: 143 ------------KSDS---------CKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPK 181
+D +V+G++S+ G GRN DRQ+ +VN RPV+
Sbjct: 235 DLNPFKNRMLGKYTDDPDFLDLDYKIRVKGYISQNSFGCGRNSKDRQFIYVNKRPVEYST 294
Query: 182 VSKLVNELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQE 241
+ K NE+YK N+ Q+P +N +P DVNVTPDKR + +E +++ + L +
Sbjct: 295 LLKCCNEVYKTFNNVQFPAVFLNLELPMSLIDVNVTPDKRVILLHNERAVIDIFKTTLSD 354
Query: 242 IYS 244
Y+
Sbjct: 355 YYN 357
Score = 79.7 bits (195), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 50/71 (70%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I IN VHRI +GQVI DL++AVKELV+NS+DA A IEI K+YG E + DNG G
Sbjct: 4 IHQINDIDVHRITSGQVITDLTTAVKELVDNSIDANANQIEIIFKDYGLESIECSDNGDG 63
Query: 72 ISPNNFKVRAV 82
I P+N++ A+
Sbjct: 64 IDPSNYEFLAL 74
>sp|Q0STR3|MUTL_CLOPS DNA mismatch repair protein MutL OS=Clostridium perfringens (strain
SM101 / Type A) GN=mutL PE=3 SV=1
Length = 674
Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 106/202 (52%), Gaps = 21/202 (10%)
Query: 606 ERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQ---Q 662
ER++R+ F ++KVIGQFN +I+ + D L+++DQHAA EK FE+ S + Q
Sbjct: 475 ERIYREAKFPKLKVIGQFNKTYILAEYDSTLYLIDQHAAHEKILFEKYSSDIAKKKVEIQ 534
Query: 663 PLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVE 722
PL+ PL + L E+ + + +I K GF + + R++ VP+ E
Sbjct: 535 PLMIPLVVTLPTEDYLYYDENKEIFEKAGFKISD----FGDNSIRIEEVPYFLDKLNPTE 590
Query: 723 DVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQ 782
+ +I+ L KM T ++V + +AS +CR+++ D L EM+
Sbjct: 591 LIISMINNLK------------KMGTGETVEVKYNK--IASMSCRAAVKANDVLSILEME 636
Query: 783 KILEHLADLNSPWNCPHGRPTM 804
++E L +N P++CPHGRPT+
Sbjct: 637 NLIEDLRYINDPFHCPHGRPTI 658
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 52/93 (55%), Gaps = 2/93 (2%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I +N ++I AG+V++ SS VKELVENSLDAGA +I I ++ GE +++D+G G
Sbjct: 4 INILNADTANKIAAGEVVERPSSVVKELVENSLDAGAKNITIEIQNGGESLIKIIDDGSG 63
Query: 72 ISPNNFKVRAVFLCQAYALIAKGVRFVCTNTTG 104
+ P + V F A + I NT G
Sbjct: 64 VHPED--VEKAFNPHATSKIKDTYDIFSINTLG 94
Score = 38.5 bits (88), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 62/143 (43%), Gaps = 12/143 (8%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYF 170
+L T G+ L D I T++G + L K D+ V GF+ R + Q
Sbjct: 196 ILNTYGNGKLIDVIRTIYGKSTAENLIYFEEHK-DTASVYGFIG--NDTLARASRNNQSL 252
Query: 171 FVNDRPVDLPKVSKLVNELYKGAN-SRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDEC 229
FVN R V ++ V ++ N + ++P ++ DVN+ P K ++ F DE
Sbjct: 253 FVNKRYVKNRSLTVAVENAFRSFNVTGKFPFFVLFIDTYPELIDVNIHPTKSEIKFKDER 312
Query: 230 SILH--------ALREGLQEIYS 244
I A+RE +++ ++
Sbjct: 313 FIFKLVFDAVHSAMREYVKDTFT 335
>sp|C1FNT8|MUTL_CLOBJ DNA mismatch repair protein MutL OS=Clostridium botulinum (strain
Kyoto / Type A2) GN=mutL PE=3 SV=1
Length = 666
Score = 107 bits (266), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 104/192 (54%), Gaps = 23/192 (11%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLS---QSTVLNQQPLLRPLKLDLT 673
MK+IGQFN +I+ + D++L+I+DQHAA EK FE+ + + Q LL P+ ++L+
Sbjct: 478 MKIIGQFNNTYILIEKDKELYIIDQHAAHEKVLFEKFKSEIEKGYVISQILLSPVVIELS 537
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
+E + + DI + +GFS+E +K VP + G +V+DL +
Sbjct: 538 EDEFNIYEENKDIFKNSGFSVE----TFGECTINIKEVP----LILGKPNVEDLFMDIL- 588
Query: 734 NQGECSIISSYKMDTADSVCPSRVRA-MLASRACRSSIMIGDALGRNEMQKILEHLADLN 792
Y + S S ++ +A+ AC+S++ D L E++K++E++ LN
Sbjct: 589 ----------YNLKNMKSKETSTIKYNAIATLACKSAVKANDNLKEEEIKKLIENMLTLN 638
Query: 793 SPWNCPHGRPTM 804
+P+ CPHGRPTM
Sbjct: 639 NPYTCPHGRPTM 650
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 21 HRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFKVR 80
++I AG+VI+ S VKELVENS+DAGA +I I +++ G+ +++D+G GI P ++
Sbjct: 13 NKIAAGEVIERPFSVVKELVENSIDAGAKNITIEIEDGGQNLIKIIDDGEGIYP--IDIK 70
Query: 81 AVFLCQAYALI 91
FL A + I
Sbjct: 71 NAFLPHATSKI 81
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 93/238 (39%), Gaps = 32/238 (13%)
Query: 26 GQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPN--------NF 77
G+ + +SS K +++ +D+ EI ++ E+ + D GC + N
Sbjct: 97 GEALASISSVSKTKLKSRVDSYNFGKEIYIEGGKIEYLK--DTGCNVGTTIEVSDLFYNV 154
Query: 78 KVRAVFLCQA-------------YALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNI 124
R FL A + L + F N +++KS G+ +LKD+I
Sbjct: 155 PARLKFLKSARSDSSSISDIVNRFILAHPDISFNLINKGKQSIKSY-----GTGNLKDSI 209
Query: 125 ITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSK 184
V+ I L K D V GF+ KP R Q FVN R V ++
Sbjct: 210 RCVYNKTISENLINFESHK-DIISVYGFIGKPE--ISRKSRTNQSIFVNKRYVKSKFITA 266
Query: 185 LVNELYKG-ANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQE 241
V +K YP ++ + DVNV P K +V F DE ++ + + + E
Sbjct: 267 AVENAFKSFLTVNSYPFFVIFIDIFPEYIDVNVHPTKSEVKFKDERAMFKTIFDAVHE 324
>sp|C3KX34|MUTL_CLOB6 DNA mismatch repair protein MutL OS=Clostridium botulinum (strain
657 / Type Ba4) GN=mutL PE=3 SV=1
Length = 666
Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 104/192 (54%), Gaps = 23/192 (11%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLS---QSTVLNQQPLLRPLKLDLT 673
MK+IGQFN +I+ + D++L+I+DQHAA EK FE+ + + Q LL P+ ++L+
Sbjct: 478 MKIIGQFNNTYILIEKDKELYIIDQHAAHEKVLFEKFKSEIEKGYVVSQILLSPVVIELS 537
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
+E + + DI + +GFS+E A +K VP + G +V++L +
Sbjct: 538 EDEFNIYEENKDIFKNSGFSVE----AFGECTINIKEVP----LILGKPNVENLFMDIL- 588
Query: 734 NQGECSIISSYKMDTADSVCPSRVRA-MLASRACRSSIMIGDALGRNEMQKILEHLADLN 792
Y + S S ++ +A+ AC+S++ D L E++K++E + LN
Sbjct: 589 ----------YNLKNMKSKETSTIKYNAIATLACKSAVKANDNLKEEEIKKLIEDMLILN 638
Query: 793 SPWNCPHGRPTM 804
+P+ CPHGRPTM
Sbjct: 639 NPYTCPHGRPTM 650
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 48/71 (67%), Gaps = 2/71 (2%)
Query: 21 HRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFKVR 80
++I AG+VI+ S VKELVENS+DAGA +I I +++ G++ +++D+G GI P ++
Sbjct: 13 NKIAAGEVIERPFSVVKELVENSIDAGAKNITIEIEDGGQKLIKIIDDGEGIYP--IDIK 70
Query: 81 AVFLCQAYALI 91
FL A + I
Sbjct: 71 NAFLPHATSKI 81
Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 97/235 (41%), Gaps = 26/235 (11%)
Query: 26 GQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPN--------NF 77
G+ + +SS K +++ +D+ EI ++ E+ + D GC + N
Sbjct: 97 GEALASISSVSKTKLKSRVDSYNFGKEIYIEGGKIEYLK--DTGCNVGTTIEVSDLFYNV 154
Query: 78 KVRAVFLCQAYA---LIAKGV-RFVCT------NTTGKNVKSVVLKTQGSSSLKDNIITV 127
R FL A + I+ V RF+ N K +S+ K+ G+ +LKD+I V
Sbjct: 155 PARLKFLKSARSDSSAISDIVNRFILAHPDISFNLINKGKQSI--KSYGTGNLKDSIRCV 212
Query: 128 FGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVN 187
+ I L K D V GF+ KP R Q FVN R V ++ V
Sbjct: 213 YNKTISENLINFENHK-DIISVYGFIGKPE--ISRKSRTNQSIFVNKRYVKSKFITAAVE 269
Query: 188 ELYKG-ANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQE 241
+K YP ++ + DVNV P K +V F DE ++ + + + E
Sbjct: 270 NAFKSFLTVNSYPFFVIFIDIFPEYIDVNVHPTKSEVKFKDERAMFKTIFDAVHE 324
>sp|A7GE44|MUTL_CLOBL DNA mismatch repair protein MutL OS=Clostridium botulinum (strain
Langeland / NCTC 10281 / Type F) GN=mutL PE=3 SV=1
Length = 666
Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 106/193 (54%), Gaps = 25/193 (12%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQ----QPLLRPLKLDL 672
MK+IGQFN +I+ + D++L+I+DQHAA EK FE+ +S + N+ Q LL P+ ++L
Sbjct: 478 MKIIGQFNNTYILIEKDKELYIIDQHAAHEKVLFEKF-KSEIENRYVISQILLSPVVIEL 536
Query: 673 TPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLA 732
+ +E + + DI + +GFS+E +K VP + G +V++L +
Sbjct: 537 SEDEFNIYEENKDIFKNSGFSVE----TFGEYTINIKEVP----LILGKPNVENLFMDIL 588
Query: 733 DNQGECSIISSYKMDTADSVCPSRVRA-MLASRACRSSIMIGDALGRNEMQKILEHLADL 791
Y + S S ++ +A+ AC+S++ D L E++K++E + L
Sbjct: 589 -----------YNLKNMKSKETSTIKYNAIATLACKSAVKANDNLKEEEIKKLIEDMLIL 637
Query: 792 NSPWNCPHGRPTM 804
N+P+ CPHGRPTM
Sbjct: 638 NNPYTCPHGRPTM 650
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 48/71 (67%), Gaps = 2/71 (2%)
Query: 21 HRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFKVR 80
++I AG+VI+ S VKELVENS+DAGA +I I +++ G++ +++D+G GI P ++
Sbjct: 13 NKIAAGEVIERPFSVVKELVENSIDAGAKNITIEIEDGGQKLIKIIDDGEGIYP--IDIK 70
Query: 81 AVFLCQAYALI 91
FL A + I
Sbjct: 71 NAFLPHATSKI 81
Score = 43.1 bits (100), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 92/237 (38%), Gaps = 32/237 (13%)
Query: 26 GQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPN--------NF 77
G+ + +SS K +++ +D+ EI ++ E+ + D GC + N
Sbjct: 97 GEALASISSVSKTKLKSRVDSYNFGKEIYIEGGKIEYLK--DTGCNVGTTIEVSDLFYNV 154
Query: 78 KVRAVFLCQA-------------YALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNI 124
R FL A + L + F N +++KS G+ +LKD+I
Sbjct: 155 PARLKFLKSARSDSSSISDIVNRFILAHPDISFNLINKGKQSIKSY-----GTGNLKDSI 209
Query: 125 ITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSK 184
V+ I L K D V GF+ KP R Q FVN R V ++
Sbjct: 210 RCVYNKTISENLINFESHK-DIISVYGFIGKPE--ISRKSRTNQSIFVNKRYVKSKFITA 266
Query: 185 LVNELYKG-ANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQ 240
V +K YP ++ + DVNV P K +V F DE ++ + + +
Sbjct: 267 AVENAFKSFLTVNSYPFFVIFIDIFPEYIDVNVHPTKSEVKFKDERAMFKTIFDAVH 323
>sp|Q8XL86|MUTL_CLOPE DNA mismatch repair protein MutL OS=Clostridium perfringens (strain
13 / Type A) GN=mutL PE=3 SV=1
Length = 674
Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 110/203 (54%), Gaps = 23/203 (11%)
Query: 606 ERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQ---Q 662
E ++R+ F +++VIGQFN +I+ + D L+++DQHAA EK FE+ S + Q
Sbjct: 475 EIIYREAKFPKLRVIGQFNKTYILAEYDSTLYLIDQHAAHEKILFEKYSSDIAKKKVEIQ 534
Query: 663 PLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVP-FSKKITFGV 721
PL+ PL + L E+ + + +I K GF + + R++ VP F K+
Sbjct: 535 PLMIPLVVTLPTEDYLYYDENKEIFEKAGFKISD----FGDNSIRIEEVPYFLDKL---- 586
Query: 722 EDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEM 781
+ +LI+++ +N KM T ++V + +AS +CR+++ D L EM
Sbjct: 587 -NPTELITSMINNLK--------KMGTGETVEVKYNK--IASMSCRAAVKANDVLSILEM 635
Query: 782 QKILEHLADLNSPWNCPHGRPTM 804
+ ++E L +N P++CPHGRPT+
Sbjct: 636 ENLIEDLRYINDPFHCPHGRPTI 658
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 52/93 (55%), Gaps = 2/93 (2%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I +N ++I AG+V++ SS VKELVENSLDAGA +I I ++ GE +++D+G G
Sbjct: 4 INILNADTANKIAAGEVVERPSSVVKELVENSLDAGAKNITIEIQNGGESLIKIIDDGSG 63
Query: 72 ISPNNFKVRAVFLCQAYALIAKGVRFVCTNTTG 104
+ P + V F A + I NT G
Sbjct: 64 VHPED--VEKAFNPHATSKIKDTYDIFSINTLG 94
Score = 38.5 bits (88), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 62/143 (43%), Gaps = 12/143 (8%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYF 170
+L T G+ L D I T++G + L K D+ V GF+ R + Q
Sbjct: 196 ILNTYGNGKLIDVIRTIYGKSTAENLIYFEEHK-DTASVYGFIG--NDTLARASRNNQSL 252
Query: 171 FVNDRPVDLPKVSKLVNELYKGAN-SRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDEC 229
FVN R V ++ V ++ N + ++P ++ DVN+ P K ++ F DE
Sbjct: 253 FVNKRYVKNRSLTVAVENAFRSFNVTGKFPFFVLFIDTYPELIDVNIHPTKSEIKFKDER 312
Query: 230 SILH--------ALREGLQEIYS 244
I A+RE +++ ++
Sbjct: 313 FIFKVVFDAVHSAMREYVKDTFT 335
>sp|Q0TRD5|MUTL_CLOP1 DNA mismatch repair protein MutL OS=Clostridium perfringens (strain
ATCC 13124 / NCTC 8237 / Type A) GN=mutL PE=3 SV=1
Length = 674
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 64/203 (31%), Positives = 110/203 (54%), Gaps = 23/203 (11%)
Query: 606 ERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTV---LNQQ 662
E ++R+ F +++VIGQFN +I+ + D L+++DQHAA EK FE+ S + Q
Sbjct: 475 EIIYREAKFPKLRVIGQFNKTYILAEYDSTLYLIDQHAAHEKILFEKYSSDIAKKRVEIQ 534
Query: 663 PLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVP-FSKKITFGV 721
PL+ PL + L E+ + + +I K GF + + R++ VP F K+
Sbjct: 535 PLMIPLVVTLPTEDYLYYDENKEIFEKAGFKISD----FGDNSIRIEEVPYFLDKL---- 586
Query: 722 EDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEM 781
+ +LI+++ +N KM T ++V + +AS +CR+++ D L EM
Sbjct: 587 -NPTELITSMINNLK--------KMGTGETVEVKYNK--IASMSCRAAVKANDVLSILEM 635
Query: 782 QKILEHLADLNSPWNCPHGRPTM 804
+ ++E L +N P++CPHGRPT+
Sbjct: 636 ENLIEDLRYINDPFHCPHGRPTI 658
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 52/93 (55%), Gaps = 2/93 (2%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I +N ++I AG+V++ SS VKELVENSLDAGA +I I ++ GE +++D+G G
Sbjct: 4 INILNADTANKIAAGEVVERPSSVVKELVENSLDAGAKNITIEIQNGGESLIKIIDDGSG 63
Query: 72 ISPNNFKVRAVFLCQAYALIAKGVRFVCTNTTG 104
+ P + V F A + I NT G
Sbjct: 64 VHPED--VEKAFNPHATSKIKDTYDIFSINTLG 94
Score = 38.5 bits (88), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 62/143 (43%), Gaps = 12/143 (8%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYF 170
+L T G+ L D I T++G + L K D+ V GF+ R + Q
Sbjct: 196 ILNTYGNGKLIDVIRTIYGKSTAENLIYFEEHK-DTASVYGFIG--NDTLARASRNNQSL 252
Query: 171 FVNDRPVDLPKVSKLVNELYKGAN-SRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDEC 229
FVN R V ++ V ++ N + ++P ++ DVN+ P K ++ F DE
Sbjct: 253 FVNKRYVKNRSLTVAVENAFRSFNVTGKFPFFVLFIDTYPELIDVNIHPTKSEIKFKDER 312
Query: 230 SILH--------ALREGLQEIYS 244
I A+RE +++ ++
Sbjct: 313 FIFKVVFDAVHSAMREYVKDTFT 335
>sp|A7FUK9|MUTL_CLOB1 DNA mismatch repair protein MutL OS=Clostridium botulinum (strain
ATCC 19397 / Type A) GN=mutL PE=3 SV=1
Length = 666
Score = 104 bits (259), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 103/192 (53%), Gaps = 23/192 (11%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLS---QSTVLNQQPLLRPLKLDLT 673
MK+IGQFN +I+ + D++L+I+DQHAA EK FE+ + + Q LL P+ ++L+
Sbjct: 478 MKIIGQFNNTYILIEKDKELYIIDQHAAHEKVLFEKFKCEIEKGYVISQILLSPVVIELS 537
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
+E + + DI + +GFS+E +K VP + G +V++L +
Sbjct: 538 EDEFNIYEENKDIFKNSGFSVE----TFGEYTINIKEVP----LILGKPNVENLFMDIL- 588
Query: 734 NQGECSIISSYKMDTADSVCPSRVRA-MLASRACRSSIMIGDALGRNEMQKILEHLADLN 792
Y + S S ++ +A+ AC+S++ D L E++K++E + LN
Sbjct: 589 ----------YNLKNMKSKETSTIKYNAIATLACKSAVKANDNLKEEEIKKLIEDMLILN 638
Query: 793 SPWNCPHGRPTM 804
+P+ CPHGRPTM
Sbjct: 639 NPYTCPHGRPTM 650
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 48/71 (67%), Gaps = 2/71 (2%)
Query: 21 HRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFKVR 80
++I AG+VI+ S VKELVENS+DAGA +I I +++ G++ +++D+G GI P ++
Sbjct: 13 NKIAAGEVIERPFSVVKELVENSIDAGAKNITIEIEDGGQKLIKIIDDGEGIYP--IDIK 70
Query: 81 AVFLCQAYALI 91
FL A + I
Sbjct: 71 NAFLPHATSKI 81
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 96/235 (40%), Gaps = 26/235 (11%)
Query: 26 GQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPN--------NF 77
G+ + +SS K +++ +D+ EI ++ E+ + D GC + N
Sbjct: 97 GEALASISSVSKTKLKSRVDSYNFGKEIYIEGGKIEYLK--DTGCNVGTTIEVSDLFYNV 154
Query: 78 KVRAVFLCQAYALIAKGV----RFVCT------NTTGKNVKSVVLKTQGSSSLKDNIITV 127
R FL A + + RF+ + N K +S+ K+ G+ +LKD+I V
Sbjct: 155 PARLKFLKSARSDSSSISDIVNRFILSHPDISFNLINKGKQSI--KSYGTGNLKDSIRCV 212
Query: 128 FGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVN 187
+ I L K D V GF+ KP R Q FVN R V ++ V
Sbjct: 213 YNKTISENLINFESHK-DIISVYGFIGKPE--ISRKSRTNQSIFVNKRYVKSKFITAAVE 269
Query: 188 ELYKG-ANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQE 241
+K YP ++ + DVNV P K +V F DE ++ + + + E
Sbjct: 270 NAFKSFLTVNSYPFFVIFIDIFPEYIDVNVHPTKSEVKFKDERAMFKTIFDAVHE 324
>sp|B1IM67|MUTL_CLOBK DNA mismatch repair protein MutL OS=Clostridium botulinum (strain
Okra / Type B1) GN=mutL PE=3 SV=1
Length = 666
Score = 104 bits (259), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 103/192 (53%), Gaps = 23/192 (11%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLS---QSTVLNQQPLLRPLKLDLT 673
MK+IGQFN +I+ + D++L+I+DQHAA EK FE+ + + Q LL P+ ++L+
Sbjct: 478 MKIIGQFNNTYILIEKDKELYIIDQHAAHEKVLFEKFKSEIEKGYVISQILLSPVVIELS 537
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
+E + + DI + +GFS+E +K VP + G +V++L +
Sbjct: 538 EDEFNIYEENKDIFKNSGFSVE----TFGEYTINIKEVP----LILGKPNVENLFMDIL- 588
Query: 734 NQGECSIISSYKMDTADSVCPSRVRA-MLASRACRSSIMIGDALGRNEMQKILEHLADLN 792
Y + S S ++ +A+ AC+S++ D L E++K++E + LN
Sbjct: 589 ----------YNLKNMKSKETSTIKYNAIATLACKSAVKANDNLKEEEIKKLIEDMLILN 638
Query: 793 SPWNCPHGRPTM 804
+P+ CPHGRPTM
Sbjct: 639 NPYTCPHGRPTM 650
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 48/71 (67%), Gaps = 2/71 (2%)
Query: 21 HRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFKVR 80
++I AG+VI+ S VKELVENS+DAGA +I I +++ G++ +++D+G GI P ++
Sbjct: 13 NKIAAGEVIERPFSVVKELVENSIDAGAKNITIEIEDGGQKLIKIIDDGEGIYP--IDIK 70
Query: 81 AVFLCQAYALI 91
FL A + I
Sbjct: 71 NAFLPHATSKI 81
Score = 41.2 bits (95), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 92/238 (38%), Gaps = 32/238 (13%)
Query: 26 GQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPN--------NF 77
G+ + +SS K +++ +D+ EI ++ E+ + D GC + N
Sbjct: 97 GEALASISSVSKTKLKSRVDSYNFGKEIYIEGGKIEYLK--DTGCNVGTTIEVSDLFYNV 154
Query: 78 KVRAVFLCQA-------------YALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNI 124
R FL A + L + F N +++KS G+ +LKD+I
Sbjct: 155 PARLKFLKSARSDSSSISDIVNRFILAHPDISFNLINKGKQSIKSY-----GTGNLKDSI 209
Query: 125 ITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSK 184
V+ I L K D V GF+ K R Q FVN R V ++
Sbjct: 210 RCVYNKTISENLINFESHK-DIISVYGFIGKTE--ISRKSRTNQSIFVNKRYVKSKFITA 266
Query: 185 LVNELYKG-ANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQE 241
V +K YP ++ + DVNV P K +V F DE ++ + + + E
Sbjct: 267 AVENAFKSFLTVNSYPFFVIFIDIFPEYIDVNVHPTKSEVKFKDERAMFKTIFDAVHE 324
>sp|B1KSA2|MUTL_CLOBM DNA mismatch repair protein MutL OS=Clostridium botulinum (strain
Loch Maree / Type A3) GN=mutL PE=3 SV=1
Length = 666
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 103/192 (53%), Gaps = 23/192 (11%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLS---QSTVLNQQPLLRPLKLDLT 673
MK+IGQFN +I+ + D++L+I+DQHAA EK FE+ + + Q LL P+ ++L+
Sbjct: 478 MKIIGQFNNTYILIEKDKELYIIDQHAAHEKVLFEKFKSEIEKGYVISQILLSPVVIELS 537
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
+E + + DI + +GF++E +K VP + G +V++L +
Sbjct: 538 EDEFNIYEENKDIFKNSGFAVEN----FGESTINIKEVP----LILGKPNVENLFMDIL- 588
Query: 734 NQGECSIISSYKMDTADSVCPSRVRA-MLASRACRSSIMIGDALGRNEMQKILEHLADLN 792
Y + S S ++ +A+ AC+S++ D L E++K++E + LN
Sbjct: 589 ----------YNLKNMKSKETSTIKYNAIATLACKSAVKANDNLKEEEIKKLIEDMLILN 638
Query: 793 SPWNCPHGRPTM 804
+P+ CPHGRPTM
Sbjct: 639 NPYTCPHGRPTM 650
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 46/67 (68%), Gaps = 2/67 (2%)
Query: 21 HRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFKVR 80
++I AG+VI+ S VKELVENS+DAGA +I I +++ G++ +++D+G GI P ++
Sbjct: 13 NKIAAGEVIERPFSVVKELVENSIDAGAKNITIEIEDGGQKLIKIIDDGEGIYP--IDIK 70
Query: 81 AVFLCQA 87
FL A
Sbjct: 71 NAFLPHA 77
Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 93/238 (39%), Gaps = 32/238 (13%)
Query: 26 GQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPN--------NF 77
G+ + +SS K +++ +D+ EI ++ E+ + D GC + N
Sbjct: 97 GEALASISSVSKTKLKSRVDSYNFGKEIYIEGGKIEYLK--DTGCNVGTTIEVSDLFYNV 154
Query: 78 KVRAVFLCQA-------------YALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNI 124
R FL A + L + F N +++KS G+ +LKD+I
Sbjct: 155 PARLKFLKSARSDSSSISDIVNRFILAHPDISFNLINKGKQSIKSY-----GTGNLKDSI 209
Query: 125 ITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSK 184
V+ I L K D V GF+ KP R Q FVN R V ++
Sbjct: 210 RCVYNKTISENLINFESHK-DIISVYGFIGKPE--ISRKSRTNQSIFVNKRYVKSKFITA 266
Query: 185 LVNELYKG-ANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQE 241
V +K YP ++ + DVNV P K +V F DE ++ + + + E
Sbjct: 267 AVENAFKSFLTVNSYPFFVIFIDIFPEYIDVNVHPTKSEVKFKDERAMFKTIFDAVHE 324
>sp|A6LWJ1|MUTL_CLOB8 DNA mismatch repair protein MutL OS=Clostridium beijerinckii
(strain ATCC 51743 / NCIMB 8052) GN=mutL PE=3 SV=1
Length = 664
Score = 101 bits (251), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 64/196 (32%), Positives = 105/196 (53%), Gaps = 25/196 (12%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFER----LSQSTVLNQQPLLRPLK 669
F + +IGQ+N +I+G+ D L+++DQHAA EK FE+ + + T++ QPL+ P
Sbjct: 473 FPPITIIGQYNKTYILGEYDGTLYMIDQHAAHEKILFEKYLKEIEEGTII-IQPLIVPSI 531
Query: 670 LDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIS 729
+DL+ ++ + DI R+ GF LEE G LK VP+ G + K+L
Sbjct: 532 IDLSIDDYSYFEENKDIFREAGFLLEE----FGGSSLSLKEVPY----FLGRLNPKNLFL 583
Query: 730 TLADNQGECSIISSYKMDTADSVCPSRVRA-MLASRACRSSIMIGDALGRNEMQKILEHL 788
+ DN + + S V+ +A++AC+++I D L NEM K++E L
Sbjct: 584 DILDN-----------LKNLGNGKTSEVKHNAIATKACKAAIKGNDKLEMNEMIKLIEDL 632
Query: 789 ADLNSPWNCPHGRPTM 804
++ P++CPHGRP +
Sbjct: 633 RYIDDPFHCPHGRPVI 648
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 54/93 (58%), Gaps = 2/93 (2%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I +N+ ++I AG+V++ +S VKEL+ENS+DA A +I I ++E G +++D+G G
Sbjct: 4 INILNEDTANKIAAGEVVERPASVVKELIENSIDANAKNIIIEIEEGGISLIRIIDDGDG 63
Query: 72 ISPNNFKVRAVFLCQAYALIAKGVRFVCTNTTG 104
I ++ + FL A + I + +T G
Sbjct: 64 IYKDD--IAKAFLPHATSKIQESEDIYNIHTLG 94
Score = 42.7 bits (99), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 63/128 (49%), Gaps = 8/128 (6%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLS--KPGQGSGRNLGDRQ 168
VL T G+ LKD I T++G +I + + + SD V G++ + +GS N Q
Sbjct: 196 VLHTFGNGDLKDVIRTIYGKSITDNILYFS-DSSDLITVYGYVGTEEIARGSRNN----Q 250
Query: 169 YFFVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSD 227
FVN R + ++ V + +K ++ ++P I+ V DVN+ P K ++ F+D
Sbjct: 251 SIFVNRRYIKNRALAIAVEQAFKSFSTVNKFPFFILFIEVYPEYVDVNIHPTKAEIKFND 310
Query: 228 ECSILHAL 235
E I +
Sbjct: 311 ERMIFKKI 318
>sp|B2TIB8|MUTL_CLOBB DNA mismatch repair protein MutL OS=Clostridium botulinum (strain
Eklund 17B / Type B) GN=mutL PE=3 SV=1
Length = 672
Score = 101 bits (251), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 114/217 (52%), Gaps = 24/217 (11%)
Query: 592 ERKARALAAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFE 651
++++++ T+EL + + F +K+IGQ+N +I+G+ L+++DQHAA EK FE
Sbjct: 460 DKESKSKTTGTSELVKE-KIPKFPAIKIIGQYNKTYILGEYAGTLYMIDQHAAHEKIMFE 518
Query: 652 RLSQSTVLNQ---QPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRL 708
+ + QPL+ P +DL+ ++ + D+ ++ GF++E+ G L
Sbjct: 519 KYLNDIICGDIIIQPLMIPTVIDLSMDDYSYFEENKDVFKEAGFTIED----FGGTSIAL 574
Query: 709 KAVPFSKKITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRA-MLASRACR 767
K VP+ G K+L + DN + S + V+ +A++AC+
Sbjct: 575 KEVPY----FLGKLKPKNLFLEILDN-----------LKNLGSGKTTEVKYNAIATKACK 619
Query: 768 SSIMIGDALGRNEMQKILEHLADLNSPWNCPHGRPTM 804
S++ D+L EM K++E L ++ P++CPHGRPT+
Sbjct: 620 SAVKGNDSLDELEMVKLIEELRYIDDPFHCPHGRPTI 656
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 53/93 (56%), Gaps = 2/93 (2%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I +N+ ++I AG+V++ +S VKELVEN++DA + +I I ++E G +++D+G G
Sbjct: 4 INILNEDTANKIAAGEVVERPASVVKELVENAIDANSKNILIEIEEGGSSLIRIIDDGDG 63
Query: 72 ISPNNFKVRAVFLCQAYALIAKGVRFVCTNTTG 104
I + + FL A + I + NT G
Sbjct: 64 IYKED--IEKAFLPHATSKIKESEDIYSINTLG 94
Score = 44.3 bits (103), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 62/128 (48%), Gaps = 8/128 (6%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICK--SDSCKVEGFLSKPGQGSGRNLGDRQ 168
++ T G+ ++KD I T++G +I +E V + SD + G++ K G + Q
Sbjct: 196 IIHTYGNGNMKDVIRTIYGKSI---VENVLYFEDTSDIATIYGYVGKEAIARGSR--NNQ 250
Query: 169 YFFVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSD 227
FVN R + + V + +K ++ ++P I+ + DVN+ P K +V F+D
Sbjct: 251 SIFVNSRYIKNRSLGIAVEQAFKSFSTVSKFPFFILFIEIYPEYIDVNIHPTKSEVKFND 310
Query: 228 ECSILHAL 235
E I +
Sbjct: 311 ERFIFKKI 318
>sp|Q97I20|MUTL_CLOAB DNA mismatch repair protein MutL OS=Clostridium acetobutylicum
(strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM
B-1787) GN=mutL PE=3 SV=1
Length = 622
Score = 90.9 bits (224), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 103/206 (50%), Gaps = 31/206 (15%)
Query: 610 RKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTV---LNQQPLLR 666
+K F ++VIGQFN +I+ + ++L+I+DQHAA EK FE+ + ++ Q L+
Sbjct: 427 KKAKFPELRVIGQFNNTYILAESFEELYIIDQHAAHEKILFEKYREDIKNKGVSSQILIT 486
Query: 667 PLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKD 726
P ++L PE+ + + ++ + GF +E +K VP + G VKD
Sbjct: 487 PSVVELLPEDFIYYDENKEVFKNAGFVIE----YFGDNTVAIKEVP----LFLGKPLVKD 538
Query: 727 LISTLADN-----QGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEM 781
L + DN GE S + + R+ +A+ AC+S++ L +EM
Sbjct: 539 LFLEIIDNLKNMGSGETSEV--------------KYRS-IATAACKSAVKAYHELTHDEM 583
Query: 782 QKILEHLADLNSPWNCPHGRPTMRHL 807
+ +++ L P+NCPHGRPT+ L
Sbjct: 584 KTLIQDLRFAEDPFNCPHGRPTIVRL 609
Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 21 HRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFKVR 80
++I AG+V++ S VKELVENS+DAGA +I I ++ G +V+D+G GI ++ +
Sbjct: 12 NKIAAGEVVERPFSVVKELVENSIDAGAKTINIEIENGGRTLIKVLDDGYGIDKDD--IE 69
Query: 81 AVFLCQAYALIAKGVRFVCTNTTG 104
F+ A + I+K NT G
Sbjct: 70 KAFMPHATSKISKLQDIYSINTLG 93
Score = 35.0 bits (79), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 69/156 (44%), Gaps = 12/156 (7%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICK-SDSCKVEGFL--SKPGQGSGRNLGDR 167
V+ T + +L D I ++G I C ++ + +D V G++ ++ +GS N
Sbjct: 195 VITTYATDNLIDTIRAIYGKKI--CDNVISFERHTDLVSVHGYVGNAEISRGSRNN---- 248
Query: 168 QYFFVNDRPVDLPKVSKLV-NELYKGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFS 226
Q F+N R + ++ V N + ++P I+ + DVNV P K +V F
Sbjct: 249 QSIFINKRYIKNKLITAAVENAVKSFMMINKFPFFIIFLDIFPEFVDVNVHPTKSEVKFQ 308
Query: 227 DECSILHALREGLQEIYSPNNASYSVNKVEQLIEPE 262
+E I + + + E N+ KVE L E E
Sbjct: 309 NERDIFKIIFDTVHE--GIRNSLKESFKVEALKEEE 342
>sp|Q13401|PM2P3_HUMAN Putative postmeiotic segregation increased 2-like protein 3 OS=Homo
sapiens GN=PMS2P3 PE=5 SV=2
Length = 168
Score = 89.0 bits (219), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/74 (54%), Positives = 57/74 (77%)
Query: 5 TPTNSPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQ 64
+P + I+PI++ VH+IC+G V+ LS+AVKELVENSLDAGAT+I++ LK+YG + +
Sbjct: 83 SPEPAKAIKPIDRKSVHQICSGPVVLSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIE 142
Query: 65 VVDNGCGISPNNFK 78
V DNGCG+ NF+
Sbjct: 143 VSDNGCGVEEENFE 156
>sp|Q895H3|MUTL_CLOTE DNA mismatch repair protein MutL OS=Clostridium tetani (strain
Massachusetts / E88) GN=mutL PE=3 SV=1
Length = 620
Score = 86.3 bits (212), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 105/208 (50%), Gaps = 33/208 (15%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFE----RLSQSTVLNQQPLLRPLKLDL 672
MK+IGQF+ +I+ + ++L+I+DQHAA EK FE ++ + V Q LL+P+ L+L
Sbjct: 432 MKIIGQFDNTYILAESVKNLYIIDQHAAHEKILFETYRDKIKKDEV-KSQLLLQPIVLEL 490
Query: 673 TPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLA 732
E+ + ++ K GF++E ++ VPF G D+ +L +
Sbjct: 491 DSEDFSYYVDNKELFYKTGFNIE----VFGENTINIREVPF----IMGKPDINNLFMDII 542
Query: 733 DN-----QGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEH 787
+N GE +I Y DS+ AMLA C+S++ D L + EM+ ++
Sbjct: 543 NNIKAMGSGE-TIEVKY-----DSI------AMLA---CKSAVKAHDKLSKEEMEALIND 587
Query: 788 LADLNSPWNCPHGRPTMRHLVDLTTIRK 815
L P+NCPHGRPT+ + L +K
Sbjct: 588 LRFAKDPFNCPHGRPTIIKITSLELEKK 615
Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 21 HRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFKVR 80
++I AG+V++ S VKELVENS+DA A +I + +K G++ +V D+G GI ++ ++
Sbjct: 13 NKIAAGEVVERPFSVVKELVENSIDAEAKNITVEVKNGGQDLIKVSDDGAGIYADD--IQ 70
Query: 81 AVFLCQAYALIAKGVRFVCTNTTG 104
FL A + I NT G
Sbjct: 71 KAFLTHATSKILNIDDIFSLNTMG 94
Score = 37.4 bits (85), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 64/136 (47%), Gaps = 12/136 (8%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICK--SDSCKVEGFL--SKPGQGSGRNLGD 166
VL T GS +L+D I ++G LE ++ + SD V G++ ++ +GS N
Sbjct: 196 VLNTYGSGNLEDAIRVIYGK---KTLENISYFESHSDIISVYGYIGNAELSRGSRNN--- 249
Query: 167 RQYFFVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACDVNVTPDKRKVFF 225
Q FVN R + ++ V +K + ++P ++ + DVNV P K ++ F
Sbjct: 250 -QSIFVNKRYIKSGLITAAVENAFKSFLTINKFPFFVIFIDIFPEYIDVNVHPTKTEIKF 308
Query: 226 SDECSILHALREGLQE 241
++ + + + + E
Sbjct: 309 KEDKIVFSFVFKTVHE 324
>sp|Q13670|PM2PB_HUMAN Putative postmeiotic segregation increased 2-like protein 11
OS=Homo sapiens GN=PMS2P11 PE=5 SV=1
Length = 270
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 53/67 (79%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+PI++ VH+IC+G V+ LS+AVKELVENSLDAGAT+I++ LK+YG + +V NGCG
Sbjct: 161 IKPIDRKSVHQICSGPVVLSLSTAVKELVENSLDAGATNIDLKLKDYGMDLIEVSGNGCG 220
Query: 72 ISPNNFK 78
+ NF+
Sbjct: 221 VEEENFE 227
>sp|A4D2B8|PM2P1_HUMAN Putative postmeiotic segregation increased 2-like protein 1 OS=Homo
sapiens GN=PMS2P1 PE=5 SV=1
Length = 440
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 53/67 (79%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+PI++ VH+IC+G V+ LS+AVKELVENSLDAGAT+I++ LK+YG + +V NGCG
Sbjct: 215 IKPIDRKSVHQICSGPVVPSLSTAVKELVENSLDAGATNIDLKLKDYGVDLIEVSGNGCG 274
Query: 72 ISPNNFK 78
+ NF+
Sbjct: 275 VEEENFE 281
>sp|A0Q0M7|MUTL_CLONN DNA mismatch repair protein MutL OS=Clostridium novyi (strain NT)
GN=mutL PE=3 SV=1
Length = 645
Score = 84.3 bits (207), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 99/202 (49%), Gaps = 31/202 (15%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQ----QPLLRPLK 669
F R+ ++GQFN +I+ + +++DQHAA EK FE+ ++ + N+ Q LL P+
Sbjct: 454 FPRLNILGQFNKTYILAESLDTFYMIDQHAAHEKILFEKF-KNQIENRDVISQILLTPVI 512
Query: 670 LDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIS 729
++++ E+ S +++I ++GF E + +R + G KD
Sbjct: 513 IEMSAEDFAYYSENINIFHESGFVTEVFGDNIISIR--------EAPMLLGKVSTKDFFL 564
Query: 730 TLAD---NQGECSIISSYKMDTADSVCPSRVRA-MLASRACRSSIMIGDALGRNEMQKIL 785
+ D N G +I ++++ M++S AC+++I L EM ++
Sbjct: 565 EIFDDIKNMGNGNI--------------AKIKHNMISSLACKAAIKANHTLSYEEMNSLI 610
Query: 786 EHLADLNSPWNCPHGRPTMRHL 807
E L + P+NCPHGRPT+ L
Sbjct: 611 EDLRYIEEPFNCPHGRPTIIKL 632
Score = 60.1 bits (144), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
Query: 21 HRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNFKVR 80
++I AG+V++ +S VKELVENS+DA A +I I +KE G++ ++ D+G GI PN+ +
Sbjct: 13 NKIAAGEVVERPASVVKELVENSIDANAKNITIEIKESGKDSIKISDDGIGIHPND--IE 70
Query: 81 AVFLCQAYALIAKGVRFVCTNTTG 104
F+ + I+ NT G
Sbjct: 71 KAFMPHGTSKISLIEDLYSINTFG 94
Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 70/147 (47%), Gaps = 9/147 (6%)
Query: 112 LKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFL--SKPGQGSGRNLGDRQY 169
L T SS +K+ I +++G NIY + SD V G++ S+ +GS N Q
Sbjct: 197 LMTYASSDVKNTIRSIYGKNIYENIISFE-EHSDIVSVYGYIGNSEISRGSRNN----QS 251
Query: 170 FFVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDE 228
FVN R + ++ V +K ++ ++P ++ + DVNV P K +V F DE
Sbjct: 252 IFVNKRYIKSGTITAAVENAFKSFSTVNKFPFFVLFVDIYPEFIDVNVHPTKSEVKFQDE 311
Query: 229 CSILHALREGLQEIYSPN-NASYSVNK 254
I + + + S + S+++NK
Sbjct: 312 RIIYKVVFDAVHSALSTSIKESFNINK 338
>sp|B5EGD4|MUTL_GEOBB DNA mismatch repair protein MutL OS=Geobacter bemidjiensis (strain
Bem / ATCC BAA-1014 / DSM 16622) GN=mutL PE=3 SV=1
Length = 647
Score = 83.6 bits (205), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 92/197 (46%), Gaps = 20/197 (10%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTV---LNQQPLLRPLKL 670
F + VIGQFN +I+ + DL ++DQHAA E+ FE+L ++ Q LL P +
Sbjct: 456 FSSLGVIGQFNASYILCQRGTDLVLIDQHAAHERVAFEKLKGQFAGREVDSQGLLFPETM 515
Query: 671 DLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIST 730
+ + E V H+ + + GF EE G + LK VP T V+ ++D++
Sbjct: 516 EFSFRESAVLREHLAELARLGFEFEE----FGGNTWLLKGVPQVLSATRYVDTIRDILEE 571
Query: 731 LADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLAD 790
L G S ++ D +LA AC S + L + E+ + + + +
Sbjct: 572 L----GSLSRSRAFSDIQED---------LLARIACHSVVRGKRTLSQVEITALFKQMDE 618
Query: 791 LNSPWNCPHGRPTMRHL 807
+ NCPHGRP M+ L
Sbjct: 619 TDFSSNCPHGRPVMQTL 635
Score = 53.5 bits (127), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 43/65 (66%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR + + + ++I AG+V++ +S KELVEN+LDAG+ + + ++ G +V D GCG
Sbjct: 5 IRILPENLTNKIAAGEVVERPASVAKELVENALDAGSKEVVVEIESGGRRLIKVSDTGCG 64
Query: 72 ISPNN 76
+S ++
Sbjct: 65 MSRDD 69
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 70/149 (46%), Gaps = 10/149 (6%)
Query: 95 VRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLS 154
VRF T KN VV + + LK+ + T+ G +I + L PV+ + KV G ++
Sbjct: 186 VRF-----TYKNDGKVVFRAL-DADLKERVATMLGRSIASFLYPVSY-QEGGLKVSGLVA 238
Query: 155 KPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSR-QYPIAIMNFIVPTRACD 213
P R+ G Y ++N R + V + + Y+ R +YP+ + + D
Sbjct: 239 APE--CSRSAGSHLYTYINGRFIKDKVVQHAILQAYRNFLERGRYPVVAVFIEIAPGEVD 296
Query: 214 VNVTPDKRKVFFSDECSILHALREGLQEI 242
VNV P K +V F ++ + A++ ++ +
Sbjct: 297 VNVHPTKHEVRFREQGRVHDAIQNAVESV 325
>sp|Q9HSM6|MUTL_HALSA DNA mismatch repair protein MutL OS=Halobacterium salinarum (strain
ATCC 700922 / JCM 11081 / NRC-1) GN=mutL PE=3 SV=1
Length = 659
Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 89/188 (47%), Gaps = 18/188 (9%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEE 676
++V+GQ + +++ + L +VDQHAADE+ ++ERL Q L+ P +L+LT E
Sbjct: 461 LRVLGQLHDTYVVAEAGDGLVLVDQHAADERVHYERLQARVDGASQALVAPAELELTAGE 520
Query: 677 EVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQG 736
V + +R+ GF E LAG R+ AVP E +D
Sbjct: 521 AAVFEAALGGLRELGFDAE-----LAGRTARVTAVPAVLADALDAELARD---------- 565
Query: 737 ECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWN 796
++SS+ D + A+LA AC +I +L + +L+ L +P+
Sbjct: 566 ---VLSSFLADADGTPVADAADAVLADLACSPAIKGNTSLAEGSVVALLDALDACENPYA 622
Query: 797 CPHGRPTM 804
CPHGRPT+
Sbjct: 623 CPHGRPTI 630
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 47/68 (69%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR ++ V RI AG+V++ +S VKELVENSLDAGA S+++++ G + V D+G G
Sbjct: 5 IRALDDATVARIAAGEVVERPASVVKELVENSLDAGAASVDVSVDAGGTDRIVVADDGRG 64
Query: 72 ISPNNFKV 79
++ ++ ++
Sbjct: 65 MTGDDLRM 72
Score = 47.4 bits (111), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 63/136 (46%), Gaps = 11/136 (8%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPV-AICKSDSC-KVEGFLSKPGQGSGRNLGDRQ 168
V T G+ ++D + V+G + L V A +DS +V G++S P R+
Sbjct: 198 VFATTGTGDVQDAALAVYGREVAQSLRTVDADPAADSVERVHGYVSDPEV----TRSTRE 253
Query: 169 YF--FVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACDVNVTPDKRKVFF 225
Y FVN R V + + V + Y + +YP A++ V D NV P K +V F
Sbjct: 254 YLATFVNGRAVTDAVLREAVLDGYGDQLAPDRYPFAVL--FVDCEGVDANVHPRKLEVRF 311
Query: 226 SDECSILHALREGLQE 241
DE + A+ G+++
Sbjct: 312 EDEAGVKAAVEAGVRD 327
>sp|B0R2S6|MUTL_HALS3 DNA mismatch repair protein MutL OS=Halobacterium salinarum (strain
ATCC 29341 / DSM 671 / R1) GN=mutL PE=3 SV=1
Length = 659
Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 89/188 (47%), Gaps = 18/188 (9%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQQPLLRPLKLDLTPEE 676
++V+GQ + +++ + L +VDQHAADE+ ++ERL Q L+ P +L+LT E
Sbjct: 461 LRVLGQLHDTYVVAEAGDGLVLVDQHAADERVHYERLQARVDGASQALVAPAELELTAGE 520
Query: 677 EVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQG 736
V + +R+ GF E LAG R+ AVP E +D
Sbjct: 521 AAVFEAALGGLRELGFDAE-----LAGRTARVTAVPAVLADALDAELARD---------- 565
Query: 737 ECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWN 796
++SS+ D + A+LA AC +I +L + +L+ L +P+
Sbjct: 566 ---VLSSFLADADGTPVADAADAVLADLACSPAIKGNTSLAEGSVVALLDALDACENPYA 622
Query: 797 CPHGRPTM 804
CPHGRPT+
Sbjct: 623 CPHGRPTI 630
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 47/68 (69%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR ++ V RI AG+V++ +S VKELVENSLDAGA S+++++ G + V D+G G
Sbjct: 5 IRALDDATVARIAAGEVVERPASVVKELVENSLDAGAASVDVSVDAGGTDRIVVADDGRG 64
Query: 72 ISPNNFKV 79
++ ++ ++
Sbjct: 65 MTGDDLRM 72
Score = 47.4 bits (111), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 63/136 (46%), Gaps = 11/136 (8%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPV-AICKSDSC-KVEGFLSKPGQGSGRNLGDRQ 168
V T G+ ++D + V+G + L V A +DS +V G++S P R+
Sbjct: 198 VFATTGTGDVQDAALAVYGREVAQSLRTVDADPAADSVERVHGYVSDPEV----TRSTRE 253
Query: 169 YF--FVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACDVNVTPDKRKVFF 225
Y FVN R V + + V + Y + +YP A++ V D NV P K +V F
Sbjct: 254 YLATFVNGRAVTDAVLREAVLDGYGDQLAPDRYPFAVL--FVDCEGVDANVHPRKLEVRF 311
Query: 226 SDECSILHALREGLQE 241
DE + A+ G+++
Sbjct: 312 EDEAGVKAAVEAGVRD 327
>sp|B1H0C7|MUTL_UNCTG DNA mismatch repair protein MutL OS=Uncultured termite group 1
bacterium phylotype Rs-D17 GN=mutL PE=3 SV=1
Length = 595
Score = 82.4 bits (202), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/202 (31%), Positives = 95/202 (47%), Gaps = 23/202 (11%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFE-RLSQ--STVLNQQPLLRPLKLDLT 673
+KVIGQ +II DL+I DQHAA E+ +E LSQ S + Q +L P DL+
Sbjct: 409 IKVIGQVFDTYIIASNKGDLYIFDQHAAAERVRYEFYLSQMKSQTIKIQQMLMPENFDLS 468
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
P + +++I + G S+EE FR+ A P L+ ++
Sbjct: 469 PSISELLKANINIFNELGISIEE----FGQNSFRITAYP-------------ALLGNISM 511
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNS 793
Q +IIS + D + + R + ACR+SI GD + E +K++ L
Sbjct: 512 EQIVKTIISDIEDDKHAEI--EQKRDKIIRSACRASIKAGDNVSFIEAKKLINDLFKCKQ 569
Query: 794 PWNCPHGRPTMRHLVDLTTIRK 815
P+ CPHGRPT + + L I K
Sbjct: 570 PFTCPHGRPTA-YKISLNEIEK 590
Score = 56.6 bits (135), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 45/62 (72%), Gaps = 3/62 (4%)
Query: 14 PIN---KGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
PIN + V++I AG+V++ +AVKELVENSLDA A+SI + ++E G++ +V DNG
Sbjct: 2 PINILSQETVNKIAAGEVVERPLNAVKELVENSLDAFASSITVEIEEAGKKLIRVSDNGF 61
Query: 71 GI 72
G+
Sbjct: 62 GM 63
Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 168 QYFFVNDRPVDLPK-VSKLVNELYKGANSR-QYPIAIMNFIVPTRACDVNVTPDKRKVFF 225
QY FVN RPV+ PK + V + YK + R +YP ++ V DVN+ P KR+V F
Sbjct: 249 QYLFVNSRPVNYPKRLMHCVYQSYKESIPRDKYPGILIYTDVDPSEIDVNIHPAKREVKF 308
Query: 226 SDECSILHALREGLQ 240
+DE I L + L+
Sbjct: 309 ADENGIYDILFKALR 323
>sp|A6TR78|MUTL_ALKMQ DNA mismatch repair protein MutL OS=Alkaliphilus metalliredigens
(strain QYMF) GN=mutL PE=3 SV=1
Length = 637
Score = 82.4 bits (202), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 96/208 (46%), Gaps = 24/208 (11%)
Query: 604 ELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNF----ERLSQSTVL 659
+L++ F K KV+GQ +I+ + DQ ++++DQHAA EK + E L + TV
Sbjct: 437 QLQKNFIKTYLQNYKVVGQLFNTYIVIEKDQSVYLIDQHAAHEKLLYIQFHEELKKETVA 496
Query: 660 NQQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITF 719
+QQ LL P+ L+ + E+ + ++ GF LE A ++AVP
Sbjct: 497 SQQ-LLTPVVLEFSHEDYITLIENISEFIPLGFELE----AFGQNSIIIRAVPL------ 545
Query: 720 GVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRN 779
L+ D +I K + V P +R + R+C+ +I D L
Sbjct: 546 -------LLDKPKDYNFIFELIDQVKNE--KHVKPDYIREKIIQRSCKEAIKAMDILDIQ 596
Query: 780 EMQKILEHLADLNSPWNCPHGRPTMRHL 807
E+Q+++ L L P CPHGRP + L
Sbjct: 597 EIQQLIRDLEKLEPPLTCPHGRPILLTL 624
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 49/67 (73%)
Query: 10 PTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNG 69
P I+ ++ +++I AG+V++ S VKEL+EN++DAG T+I + +KE G+++ +V DNG
Sbjct: 2 PQIKLLDNLTINKIAAGEVVEGPYSIVKELIENAIDAGGTAITLEIKEGGKKYIRVTDNG 61
Query: 70 CGISPNN 76
GIS ++
Sbjct: 62 IGISSDD 68
Score = 63.9 bits (154), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 71/140 (50%), Gaps = 4/140 (2%)
Query: 106 NVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLG 165
N ++ + T G +L I++VF N + L P+++ K + +++GF+S+ G
Sbjct: 191 NNQTTIFTTPGDGTLSSVILSVFEKNFFQNLIPLSVNKP-ALELDGFISQVDFVRGNR-- 247
Query: 166 DRQYFFVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACDVNVTPDKRKVF 224
Q F+VN R + +S+ + E YKG +YPI ++N + D+NV P K ++
Sbjct: 248 SFQIFYVNGRYIKSKLISQAIEEAYKGKIPINKYPICVLNIKIDPEDADINVHPSKTEIK 307
Query: 225 FSDECSILHALREGLQEIYS 244
F E I H + + ++ S
Sbjct: 308 FHKEKEIYHYIYNYVTQVLS 327
>sp|C6E4L2|MUTL_GEOSM DNA mismatch repair protein MutL OS=Geobacter sp. (strain M21)
GN=mutL PE=3 SV=1
Length = 650
Score = 81.6 bits (200), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 90/197 (45%), Gaps = 20/197 (10%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTV---LNQQPLLRPLKL 670
F + VIGQFN +I+ + DL ++DQHAA E+ FE+L ++ Q LL P +
Sbjct: 459 FSSLGVIGQFNASYILCQRGTDLILIDQHAAHERVAFEKLKGQFAGREVDSQGLLFPETM 518
Query: 671 DLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIST 730
+ + E V H + + GF EE G + LK VP T V+ ++D++
Sbjct: 519 EFSFRESAVLREHQAELARLGFEFEE----FGGNTWLLKGVPQVLSATRYVDTIRDILEE 574
Query: 731 LADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLAD 790
L G S ++ D +LA AC S + L E+ + + + +
Sbjct: 575 L----GSLSRSRAFSDIQED---------LLARIACHSVVRGKRTLSPVEIAALFKQMDE 621
Query: 791 LNSPWNCPHGRPTMRHL 807
+ NCPHGRP M+ L
Sbjct: 622 TDFSSNCPHGRPVMQTL 638
Score = 53.1 bits (126), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 43/65 (66%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR + + + ++I AG+V++ +S KELVEN+LDAG+ + + ++ G +V D GCG
Sbjct: 5 IRILPENLTNKIAAGEVVERPASVAKELVENALDAGSKEVVVEIESGGRRLIKVSDTGCG 64
Query: 72 ISPNN 76
+S ++
Sbjct: 65 MSRDD 69
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 71/149 (47%), Gaps = 10/149 (6%)
Query: 95 VRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLS 154
VRF T KN V+ + + LK+ + T+ G +I + L PV+ + KV G ++
Sbjct: 186 VRF-----TYKNDGKVMFRAL-DADLKERVATMLGRSISSFLYPVSY-QEGGLKVSGLVA 238
Query: 155 KPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSR-QYPIAIMNFIVPTRACD 213
P R+ G Y ++N R + V + + Y+ R +YP+ + + D
Sbjct: 239 APE--CSRSAGSHLYTYINGRFIKDKVVQHAILQAYRNFLERGRYPVVAVFIDIAPGEVD 296
Query: 214 VNVTPDKRKVFFSDECSILHALREGLQEI 242
VNV P K +V F ++ + A+++ ++ +
Sbjct: 297 VNVHPTKHEVRFREQGRVHDAIQKAVESV 325
>sp|B9M3N0|MUTL_GEOSF DNA mismatch repair protein MutL OS=Geobacter sp. (strain FRC-32)
GN=mutL PE=3 SV=1
Length = 598
Score = 81.3 bits (199), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 100/220 (45%), Gaps = 25/220 (11%)
Query: 599 AAATTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERL-SQST 657
AA E+ER + F + VIGQFN +I+ + L I+DQHAA E+ FERL +Q
Sbjct: 397 AAPAPEVERGY----FSGLSVIGQFNAAYILCQDGNSLVIIDQHAAHERVAFERLKTQHA 452
Query: 658 VLN--QQPLLRPLKLDLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSK 715
+ Q LL P ++ + +E V H + + GFSLEE G + L AVP
Sbjct: 453 AMGVESQRLLFPETVEFSFKEGAVIREHQTELDRVGFSLEE----FGGSTWLLNAVPHLL 508
Query: 716 KITFGVEDVKDLISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDA 775
V+ ++D++ L + G D +LA AC S +
Sbjct: 509 SGNDYVKTLRDILEEL-QSLGRSRSFQDILED------------ILARIACHSVVRGSHC 555
Query: 776 LGRNEMQKILEHLADLNSPWNCPHGRPTMRHLVDLTTIRK 815
L + E++ + + + NCPHGRP + H + L I +
Sbjct: 556 LSQQEIKALFQQMDTTEFSSNCPHGRPVL-HTLTLAEIER 594
Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 70/149 (46%), Gaps = 10/149 (6%)
Query: 95 VRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLS 154
+RF+ TN GK V + ++ L++ + T+ G + L P+ C V G +
Sbjct: 186 IRFIYTND-GKTVFRAL-----NADLRERVATLLGRTLSQDLYPLDFCDGQ-LNVTGLVG 238
Query: 155 KPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSR-QYPIAIMNFIVPTRACD 213
KP R+ Y ++N R + V V + Y+ R +YP+ ++ VP D
Sbjct: 239 KPE--CSRSAASHVYTYINGRFIRDKVVQHAVLQAYRNFMERGRYPVVVLFISVPAAEVD 296
Query: 214 VNVTPDKRKVFFSDECSILHALREGLQEI 242
VNV P K +V F ++ + A++E ++ +
Sbjct: 297 VNVHPTKHEVRFREQGRVHDAIQEAVESV 325
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 43/62 (69%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ + + + ++I AG+V++ +S VKELVEN+LDAG + + + ++ G+ +V D GCG
Sbjct: 5 IKILPEQLTNKIAAGEVVERPASVVKELVENALDAGCSEVMVEIEAGGKRLIRVSDTGCG 64
Query: 72 IS 73
++
Sbjct: 65 MT 66
>sp|Q74BP0|MUTL_GEOSL DNA mismatch repair protein MutL OS=Geobacter sulfurreducens
(strain ATCC 51573 / DSM 12127 / PCA) GN=mutL PE=3 SV=1
Length = 606
Score = 81.3 bits (199), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 94/197 (47%), Gaps = 20/197 (10%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQ---QPLLRPLKL 670
F + VIGQ+N +I+ + DL I+DQHAA E+ FERL + Q LL P +
Sbjct: 415 FSSLAVIGQYNASYILCQDGSDLVIIDQHAAHERVAFERLKTQFAAGRVEGQGLLFPETV 474
Query: 671 DLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIST 730
+L+ E V H + + GF LE+ G + +K +P ++ G + ++ L T
Sbjct: 475 ELSHRESAVVREHGGELGRLGFDLED----FGGTTWIVKGIP---RLLAGTDYLRLLRDT 527
Query: 731 LADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLAD 790
L + Q S+ +S + A V +L AC S + L E++ + H+
Sbjct: 528 LEELQ---SLGASRSIADA-------VEDILTRVACHSVVRGEHPLTTGEIEALFAHMDA 577
Query: 791 LNSPWNCPHGRPTMRHL 807
+ NCPHGRP ++ L
Sbjct: 578 TDFSTNCPHGRPVLQRL 594
Score = 53.1 bits (126), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 42/62 (67%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
IR + + + ++I AG+V++ +S VKELVEN+LDAG I + ++ G ++ D+GCG
Sbjct: 5 IRILPEILTNKIAAGEVVERPASVVKELVENALDAGCGEIIVEIEGGGRRLIRITDDGCG 64
Query: 72 IS 73
+S
Sbjct: 65 MS 66
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 71/159 (44%), Gaps = 11/159 (6%)
Query: 84 LCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICK 143
L AL VRF C + GK + + +L D + + G + + L PV +
Sbjct: 175 LVTRLALSRPEVRFTCV-SDGKTLFRAL-----DGTLLDRVAALLGKTVASALHPVDLA- 227
Query: 144 SDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSR-QYPIAI 202
++ +V G +++P R+ Y ++N R + V + + Y+ R +YP+ +
Sbjct: 228 TEGVRVTGLVARPD--VSRSAASHLYTYINGRFIRDRVVQHAILQAYRNFLERGRYPVVV 285
Query: 203 MNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQE 241
+ V DVNV P K +V F + I+H + +G E
Sbjct: 286 LFIEVSPGEVDVNVHPTKHEVRFRQQ-GIVHDVIQGAVE 323
>sp|Q1ILN0|MUTL_KORVE DNA mismatch repair protein MutL OS=Koribacter versatilis (strain
Ellin345) GN=mutL PE=3 SV=1
Length = 647
Score = 81.3 bits (199), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 100/192 (52%), Gaps = 22/192 (11%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERL----SQSTVLNQQPLLRPLKLDL 672
++ +GQ FI+ ++ L+I+DQH A E+ FE++ + ++V QQ LL PL ++L
Sbjct: 459 LRPLGQIRESFILATSNEGLWIIDQHVAHERVLFEKVLKQRAAASVETQQ-LLMPLIVEL 517
Query: 673 TPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLA 732
TP ++ V + + + +NGF +E F +KA P + ED++ +S +
Sbjct: 518 TPGQQAVFTEIAEELHQNGFEVE----PFGSRTFAVKAAPAGIR----AEDIEKTLSEVL 569
Query: 733 DNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLN 792
D+ ++ ++ A S R+ A +A C ++I + L +++M+ +L LA
Sbjct: 570 DSFEREQ--QAFNLEHAQS----RIAATIA---CHAAIKVNMPLTQDKMEWLLAELAKTE 620
Query: 793 SPWNCPHGRPTM 804
P CPHGRP +
Sbjct: 621 HPMTCPHGRPIV 632
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 43/61 (70%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I +++ V ++I AG+V++ +S VKEL+ENSLDAGA I + ++ G++ +VD+G G
Sbjct: 4 IHVLSEHVANKIAAGEVVERPASVVKELIENSLDAGAKRIRVHVEAGGKKLIHIVDDGIG 63
Query: 72 I 72
+
Sbjct: 64 M 64
Score = 36.6 bits (83), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 6/89 (6%)
Query: 147 CKVEGFLSKPG-QGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGA-NSRQYPIAIMN 204
++ GF+SKP Q RN + FVN R + V + E Y+ +P+ ++
Sbjct: 259 VRLHGFISKPEIQKLNRN---SIFVFVNGRLIRDRLVQHALTEAYRNILPPTLFPVVLLF 315
Query: 205 FIVPTRACDVNVTPDKRKVFFSDECSILH 233
+P DVNV P K +V F + S++H
Sbjct: 316 LEMPYTEVDVNVHPSKTEVRFRQQ-SLVH 343
>sp|B8CX97|MUTL_HALOH DNA mismatch repair protein MutL OS=Halothermothrix orenii (strain
H 168 / OCM 544 / DSM 9562) GN=mutL PE=3 SV=1
Length = 644
Score = 80.1 bits (196), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 107/205 (52%), Gaps = 26/205 (12%)
Query: 611 KEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNF----ERLSQSTVLNQQPLLR 666
K D +V+GQ +II + L+I+DQH A E+ + E+ + S +++Q PL+
Sbjct: 450 KMDIPIKRVLGQIKNTYIIAEGRDGLYIIDQHNAHERILYQSFIEKYNNSEIVSQ-PLVV 508
Query: 667 PLKLDLT-PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVK 725
P+ ++ T PE EV+ S ++ + K GF LE + G+ +F V +V
Sbjct: 509 PVNIETTAPEAEVLKS-YLPQLEKMGFKLE-----VFGIN------------SFIVREVP 550
Query: 726 DLISTLADNQGECSIISSYKMDTADSVCPSR-VRAMLASRACRSSIMIGDALGRNEMQKI 784
LI ++ + +I ++ ++ PS + +++ +CR +I G+ L + E ++I
Sbjct: 551 SLIKKRSNKRVVREVIDKL-LEHDKAMKPSELINEIISYMSCRGAIKAGEYLDKKEAEQI 609
Query: 785 LEHLADLNSPWNCPHGRPTMRHLVD 809
+E L ++P+ CPHGRP + H+ +
Sbjct: 610 IEGLFKTDNPYRCPHGRPIIIHITE 634
Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 47/70 (67%)
Query: 10 PTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNG 69
P I+ + + V ++I AG+V++ +S VKELVENSLDAG+ I I ++ G++ +V DNG
Sbjct: 2 PEIKRLPESVANQISAGEVVERPASVVKELVENSLDAGSNKILIEIENGGKDLIRVKDNG 61
Query: 70 CGISPNNFKV 79
GI + ++
Sbjct: 62 HGIPSDEIEI 71
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 71/155 (45%), Gaps = 15/155 (9%)
Query: 89 ALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDS-C 147
AL GV F + +VLKT G+ D I ++G + L V I D
Sbjct: 179 ALAYPGVNFTLIHNG-----RIVLKTPGTGKTLDCIYAIYGKEMAQSL--VKIDYEDRYI 231
Query: 148 KVEGFLSKPGQGSGRNLGDRQY--FFVNDRPVDLPKVSKLVNELYKGA-NSRQYPIAIMN 204
KV G++S+P +R Y FFVN R V +++ V E Y+G YP+ +N
Sbjct: 232 KVSGYISRPDYYRY----NRSYEIFFVNKRAVHNSILNRGVEEAYQGLLPPGAYPVVFLN 287
Query: 205 FIVPTRACDVNVTPDKRKVFFSDECSILHALREGL 239
+ DVNV P K++V FS + I ++ G+
Sbjct: 288 LKLNPILVDVNVHPTKKEVKFSRDKVIKEVIQNGI 322
>sp|A3CWX7|MUTL_METMJ DNA mismatch repair protein MutL OS=Methanoculleus marisnigri
(strain ATCC 35101 / DSM 1498 / JR1) GN=mutL PE=3 SV=1
Length = 585
Score = 79.7 bits (195), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 91/191 (47%), Gaps = 21/191 (10%)
Query: 617 MKVIGQFNLGFIIGK-LDQDLFIVDQHAADEKYNFERLSQS--TVLNQQPLLRPLKLDLT 673
M+ IGQ +I+ + D L++VDQHAA E+ ++++++ Q L+ P+ L L
Sbjct: 398 MEPIGQVAATYIVAEGADGTLYLVDQHAAHERVLYDQVTEQRDKAAGSQELITPVVLSLP 457
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
P+E + ++ GF ++E F ++AVP + VED + T+AD
Sbjct: 458 PKESAALRDAIPLLADEGFVVDE----FGRDTFAVRAVPAALG---AVEDPGTVRETIAD 510
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNS 793
+ S P R + ACR ++ G L ++ ++++ LA +
Sbjct: 511 LLADES-----------RTAPDRRERVTCIVACRGAVKAGALLTPDQQKRLIMQLARTKT 559
Query: 794 PWNCPHGRPTM 804
PW CPHGRPT+
Sbjct: 560 PWTCPHGRPTV 570
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 70/151 (46%), Gaps = 6/151 (3%)
Query: 112 LKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFF 171
+ TQ S + I ++G ++ L PV + + G++S+P + G +
Sbjct: 201 MATQRSGGALNTIAGLYGADLARSLVPVE-GRLPFLAIRGYISRPSESRGNP--SQISVS 257
Query: 172 VNDRPVDLPKVSKLVNELYKGANSR-QYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECS 230
+N R + +++ V E Y + +YP+A ++ + T DVNV P KR++ S E
Sbjct: 258 INGRSIASRQIAAAVREGYGTLLPKDRYPVAFLDLAIDTGLVDVNVHPTKREIRLSRERE 317
Query: 231 ILHALREGLQEIYSPNNASYS--VNKVEQLI 259
I A+ + E + ++ + V V+Q I
Sbjct: 318 ITGAIAAAVDEALAGHDLARETPVEPVQQQI 348
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 42/65 (64%), Gaps = 2/65 (3%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKE--YGEEWFQVVDNG 69
IR ++ V++I AG+V++ +S VKEL+EN++DA +TSI I + +V DNG
Sbjct: 4 IRVLDPDTVNQIAAGEVVERPASVVKELLENAIDADSTSILIDVSSDMAAITKIRVTDNG 63
Query: 70 CGISP 74
G++P
Sbjct: 64 EGMTP 68
>sp|Q0AYB2|MUTL_SYNWW DNA mismatch repair protein MutL OS=Syntrophomonas wolfei subsp.
wolfei (strain Goettingen) GN=mutL PE=3 SV=1
Length = 584
Score = 79.7 bits (195), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 69/131 (52%), Gaps = 4/131 (3%)
Query: 106 NVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLG 165
N K + +T G+ SL D +I +FG + L PV + S + G +S PG
Sbjct: 189 NEKRQLFRTPGNGSLNDAVIAIFGRDFLEPLIPVK-WEGLSLSISGLISPPGVAKMNR-- 245
Query: 166 DRQYFFVNDRPVDLPKVSKLVNELYKGAN-SRQYPIAIMNFIVPTRACDVNVTPDKRKVF 224
RQ FVN RP+ P + + ++E Y+G +R+ P+ I+ VP + DVNV P K ++
Sbjct: 246 KRQLIFVNQRPIRSPLLYRALDEGYRGLLLAREQPLVILQIAVPPDSIDVNVHPQKSEIR 305
Query: 225 FSDECSILHAL 235
F DE SI +L
Sbjct: 306 FRDEQSIFRSL 316
Score = 63.2 bits (152), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 93/197 (47%), Gaps = 31/197 (15%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQ---QPLLRPLKL 670
+ K++GQ +I+ + +Q L IVDQHAA E+ + RL Q ++ Q L PL +
Sbjct: 399 YDEFKILGQLWDSYILLEKEQTLNIVDQHAAHERIIYSRLQQFYAASRGEMQMLAFPLLM 458
Query: 671 DLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLR-FRLKAVPFSKKITFGVED--VKDL 727
DL+ + + + +I+ + GF L++ AG R L+ P I G E + ++
Sbjct: 459 DLSLRDMELLEKNQEILGELGFDLQQ-----AGPRSIFLRGTP---AIIAGQEREVLFEI 510
Query: 728 ISTLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEH 787
+ LA QG ++ + + AC+ ++ G L EM +I++
Sbjct: 511 LELLAGGQG---------INLKNEA--------IIKMACKKAVKAGTRLDYREMMQIIQE 553
Query: 788 LADLNSPWNCPHGRPTM 804
L + NCPHGRPT+
Sbjct: 554 LFITDDYKNCPHGRPTI 570
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 43/63 (68%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
I+ +N V+++I AG+VI+ +S VKEL+EN++DA + +I + + G + +V D+G
Sbjct: 2 AIKLLNDNVINKIAAGEVIERPASVVKELLENAIDAASRNIAVKISGAGLDSIEVTDDGE 61
Query: 71 GIS 73
GIS
Sbjct: 62 GIS 64
>sp|O95744|PM2P2_HUMAN Putative postmeiotic segregation increased 2-like protein 2 OS=Homo
sapiens GN=PMS2P2 PE=5 SV=1
Length = 297
Score = 79.7 bits (195), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 52/67 (77%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+PI++ VH+IC+G V+ LS+AVK++V NSLDAGAT+I++ LK+YG + +V NGCG
Sbjct: 77 IKPIDRKSVHQICSGPVVLSLSTAVKKIVGNSLDAGATNIDLKLKDYGMDLIEVSGNGCG 136
Query: 72 ISPNNFK 78
+ NF+
Sbjct: 137 VEEENFE 143
>sp|A5GEV5|MUTL_GEOUR DNA mismatch repair protein MutL OS=Geobacter uraniireducens
(strain Rf4) GN=mutL PE=3 SV=1
Length = 602
Score = 79.0 bits (193), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 90/194 (46%), Gaps = 20/194 (10%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTVLNQ---QPLLRPLKLDLT 673
+ VIGQFN +I+ + DL I+DQHAA E+ FE+L Q Q LL P ++L+
Sbjct: 415 LSVIGQFNAAYILCQDGTDLVIIDQHAAHERVAFEKLKAQFAAAQVESQRLLFPETIELS 474
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
+E H+ + + GFSLEE G + L AVP ++ G D + TL D
Sbjct: 475 FKEGATLREHLAELGRLGFSLEE----FGGATWLLNAVP---RLLSGT----DYLRTLRD 523
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNS 793
E + + AD+ + +L+ AC S + L E+ + +
Sbjct: 524 ILEELQTLGRSRT-FADA-----LEEILSRIACHSVVRGIHPLNGQEISALFAQMDATEF 577
Query: 794 PWNCPHGRPTMRHL 807
NCPHGRP +R L
Sbjct: 578 SSNCPHGRPVLRSL 591
Score = 53.5 bits (127), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 43/62 (69%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ + + + ++I AG+V++ +S VKELVEN+LDAG + + + ++ G +V D+GCG
Sbjct: 5 IKILPENLTNKIAAGEVVERPASVVKELVENALDAGCSEVVVEIEAGGRRLIKVTDSGCG 64
Query: 72 IS 73
++
Sbjct: 65 MT 66
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 67/149 (44%), Gaps = 10/149 (6%)
Query: 95 VRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLS 154
VRF+ N G+ + + + L++ + T+ G + L P+ V G ++
Sbjct: 186 VRFIYNND-GRTIFRAL-----DADLRERVATLLGRALSADLYPLDF-HDGPLGVTGLIA 238
Query: 155 KPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSR-QYPIAIMNFIVPTRACD 213
KP R+ Y ++N R + V V + Y+ R +YP+ ++ VP D
Sbjct: 239 KPE--CSRSAASHLYTYINGRFIKDKVVQHAVLQAYRNFMERGRYPVVVLFITVPADEVD 296
Query: 214 VNVTPDKRKVFFSDECSILHALREGLQEI 242
VNV P K +V F ++ + A++ L+ +
Sbjct: 297 VNVHPTKHEVRFREQGRVHDAIQAALESV 325
>sp|B3E5Z2|MUTL_GEOLS DNA mismatch repair protein MutL OS=Geobacter lovleyi (strain ATCC
BAA-1151 / DSM 17278 / SZ) GN=mutL PE=3 SV=1
Length = 589
Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 97/205 (47%), Gaps = 21/205 (10%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQSTV---LNQQPLLRPLKL 670
F + VIGQF +I+ + + L I+DQHAA E+ FE+L + Q LL P L
Sbjct: 398 FSGLSVIGQFRAAYILCQAEDRLVIIDQHAAYERVRFEQLKAGFATGGIESQRLLLPDTL 457
Query: 671 DLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIST 730
+L+ E +++I+ GF LEE G +R+ AVP ++DL++
Sbjct: 458 ELSFSEADTVRRYLNILEPLGFELEE----FGGQTWRINAVPRIVAEQDHCRLLRDLLAE 513
Query: 731 LADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLAD 790
LA+ QG + + + +LA AC S + L R +M+++L +
Sbjct: 514 LAE-QGSNAHFDQLRDE------------LLARVACHSVVRGSHPLERRQMEELLRAMDR 560
Query: 791 LNSPWNCPHGRPTMRHLVDLTTIRK 815
+ +CPHGRP + H + L + K
Sbjct: 561 TDFSAHCPHGRP-VSHEITLRELEK 584
Score = 60.1 bits (144), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 45/65 (69%)
Query: 9 SPTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDN 68
+P +R +++ + ++I AG+V++ +S VKEL+EN+LDAGAT I + + G +V DN
Sbjct: 2 APHVRILSESLANKIAAGEVVERPASVVKELIENALDAGATDIRLEISAGGRRLIRVSDN 61
Query: 69 GCGIS 73
G G+S
Sbjct: 62 GHGMS 66
Score = 36.6 bits (83), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 20/101 (19%), Positives = 49/101 (48%), Gaps = 3/101 (2%)
Query: 143 KSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGANSR-QYPIA 201
++ + ++ G+L+ P + R+ + ++N R V + + + ++ + +YP+
Sbjct: 225 ETAAARISGYLAPPA--AARSTTSAMFTYINGRFVRDKVIQHAIMQAFRPILEKGRYPLV 282
Query: 202 IMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQEI 242
+ +P DVNV P K +V F + + ++ L+E+
Sbjct: 283 ALFIELPAGEVDVNVHPTKHEVRFRRQAQVHDTIQGVLEEV 323
>sp|Q8CPE9|MUTL_STAES DNA mismatch repair protein MutL OS=Staphylococcus epidermidis
(strain ATCC 12228) GN=mutL PE=3 SV=1
Length = 645
Score = 77.8 bits (190), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 95/192 (49%), Gaps = 23/192 (11%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADE--KYNFERLSQSTVLNQ-QPLLRPLKLDLT 673
M+++GQ + +II + + +F++DQHAA E KY + R V N+ Q LL PL +
Sbjct: 457 MEIVGQVHGTYIIAQNENGMFMIDQHAAQERIKYEYFREKIGEVTNEVQNLLIPLTFHFS 516
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
+E+++ + D + K G LE G + + + P + F E+ +++I + +
Sbjct: 517 KDEQMIIDQYKDELDKVGVHLEH----FGGHDYIVNSYP----VWFPKEEAEEIIKDMIE 568
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLA-SRACRSSIMIGDALGRNEMQKILEHLADLN 792
++ +K SV ++R A +C+ SI L NEM +++ L +
Sbjct: 569 ------LVLKHK-----SVDVKKIREDAAIMMSCKKSIKANHYLKNNEMADLIDQLREAE 617
Query: 793 SPWNCPHGRPTM 804
P+ CPHGRP +
Sbjct: 618 DPFTCPHGRPII 629
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 43/62 (69%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ + + ++I AG+V++ SS VKEL+EN++DA AT I I +++ G +VVDNG G
Sbjct: 4 IKELETSLANKIAAGEVVERPSSVVKELLENAIDAQATEINIEVEQSGVSSIRVVDNGTG 63
Query: 72 IS 73
I+
Sbjct: 64 IA 65
Score = 40.0 bits (92), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 75/164 (45%), Gaps = 16/164 (9%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYF 170
+L T GS + + ++GM + L ++ SD +EGF++KP ++ Y
Sbjct: 195 LLSTNGSGRTNEVMAEIYGMKVAKDLVHISGDTSD-YHLEGFVAKPEHSRS----NKHYI 249
Query: 171 --FVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSD 227
F+N R + ++K + E Y + ++PI +N + DVNV P K +V S
Sbjct: 250 SIFINGRYIKNFVLNKAILEGYHTLLTIGRFPICYINIQMDPILVDVNVHPTKLEVRLSK 309
Query: 228 ECS----ILHALREGLQE-IYSPN---NASYSVNKVEQLIEPEK 263
E I+ +RE ++ I P N + NKV + E +K
Sbjct: 310 EDQLYDLIVTKIREAFKDKILIPQNDLNHASKKNKVLETFEQQK 353
>sp|Q5HPP4|MUTL_STAEQ DNA mismatch repair protein MutL OS=Staphylococcus epidermidis
(strain ATCC 35984 / RP62A) GN=mutL PE=3 SV=1
Length = 645
Score = 77.8 bits (190), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 95/192 (49%), Gaps = 23/192 (11%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADE--KYNFERLSQSTVLNQ-QPLLRPLKLDLT 673
M+++GQ + +II + + +F++DQHAA E KY + R V N+ Q LL PL +
Sbjct: 457 MEIVGQVHGTYIIAQNENGMFMIDQHAAQERIKYEYFREKIGEVTNEVQNLLIPLTFHFS 516
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
+E+++ + D + K G LE G + + + P + F E+ +++I + +
Sbjct: 517 KDEQMIIDQYKDELDKVGVHLEH----FGGHDYIVNSYP----VWFPKEEAEEIIKDMIE 568
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLA-SRACRSSIMIGDALGRNEMQKILEHLADLN 792
++ +K SV ++R A +C+ SI L NEM +++ L +
Sbjct: 569 ------LVLKHK-----SVDVKKIREDAAIMMSCKKSIKANHYLKNNEMADLIDQLREAE 617
Query: 793 SPWNCPHGRPTM 804
P+ CPHGRP +
Sbjct: 618 DPFTCPHGRPII 629
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 43/62 (69%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I+ + + ++I AG+V++ SS VKEL+EN++DA AT I I +++ G +VVDNG G
Sbjct: 4 IKELETSLANKIAAGEVVERPSSVVKELLENAIDAQATEINIEVEQSGVSSIRVVDNGTG 63
Query: 72 IS 73
I+
Sbjct: 64 IA 65
Score = 40.0 bits (92), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 75/164 (45%), Gaps = 16/164 (9%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYF 170
+L T GS + + ++GM + L ++ SD +EGF++KP ++ Y
Sbjct: 195 LLSTNGSGRTNEVMAEIYGMKVAKDLVHISGDTSD-YHLEGFVAKPEHSRS----NKHYI 249
Query: 171 --FVNDRPVDLPKVSKLVNELYKGANS-RQYPIAIMNFIVPTRACDVNVTPDKRKVFFSD 227
F+N R + ++K + E Y + ++PI +N + DVNV P K +V S
Sbjct: 250 SIFINGRYIKNFVLNKAILEGYHTLLTIGRFPICYINIQMDPILVDVNVHPTKLEVRLSK 309
Query: 228 ECS----ILHALREGLQE-IYSPN---NASYSVNKVEQLIEPEK 263
E I+ +RE ++ I P N + NKV + E +K
Sbjct: 310 EDQLYDLIVTKIREAFKDKILIPQNDLNHASKKNKVLETFEQQK 353
>sp|B2G6E6|MUTL_LACRJ DNA mismatch repair protein MutL OS=Lactobacillus reuteri (strain
JCM 1112) GN=mutL PE=3 SV=1
Length = 668
Score = 77.8 bits (190), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 93/199 (46%), Gaps = 21/199 (10%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQ---STVLNQQPLLRPLKL 670
F ++ IGQ F++ + L+IVDQHAA E+ N+E Q +QQ L PL L
Sbjct: 462 FPDLQYIGQLQGTFLLAQAGDGLYIVDQHAAQERINYEYYRQKIGEVSADQQNFLVPLVL 521
Query: 671 DLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIST 730
+ + + + + H+D + G LE + F L++ P K + +++I
Sbjct: 522 NYSTVDAMTINQHLDTLAAVGLELE----SFGQNSFILRSHPTWFKEGQEEDTAEEMIDW 577
Query: 731 LADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLAD 790
L N G+ ++ ++M TA M++ C+ +I L E + +L+ L
Sbjct: 578 LIKN-GKLTV-KEFRMKTA---------IMMS---CKRAIKANHHLDEREAKALLKRLPQ 623
Query: 791 LNSPWNCPHGRPTMRHLVD 809
+P+NCPHGRP H D
Sbjct: 624 CENPFNCPHGRPVTVHFND 642
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 43/62 (69%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I ++ + ++I AG+VI+ +S VKELVENSLDA + ++I ++ G + +V+D+G G
Sbjct: 4 IHELDNILANQIAAGEVIERPASIVKELVENSLDAHSHRVDIIVENSGLDSVRVIDDGDG 63
Query: 72 IS 73
I+
Sbjct: 64 IA 65
Score = 44.3 bits (103), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 79/175 (45%), Gaps = 19/175 (10%)
Query: 73 SPNNFKVRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNI 132
SP R + AL V F T+ G+ + ++ G+++L+ + ++G+
Sbjct: 163 SPQTELTRITDIINRLALANPAVAFSFTHN-GREL----FRSAGNNNLQQVVAAIYGVQA 217
Query: 133 YNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFV--NDRPVDLPKVSKLVNELY 190
+ ++ D KV GF+S P RQY + N R + + +L +
Sbjct: 218 GRKMLEIS-GADDDFKVSGFVSLPELTRA----SRQYITITINHRYI---RNFELTKAII 269
Query: 191 KGANSR----QYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQE 241
+G S+ +YPIA++N + DVNV P KR+V S E ++ + E +++
Sbjct: 270 QGYESKLMVGRYPIAVINIDLDPVLVDVNVHPAKREVRLSKEQQLIKLIAETIRQ 324
>sp|A5VIX0|MUTL_LACRD DNA mismatch repair protein MutL OS=Lactobacillus reuteri (strain
DSM 20016) GN=mutL PE=3 SV=1
Length = 668
Score = 77.8 bits (190), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 93/199 (46%), Gaps = 21/199 (10%)
Query: 614 FGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQ---STVLNQQPLLRPLKL 670
F ++ IGQ F++ + L+IVDQHAA E+ N+E Q +QQ L PL L
Sbjct: 462 FPDLQYIGQLQGTFLLAQAGDGLYIVDQHAAQERINYEYYRQKIGEVSADQQNFLVPLVL 521
Query: 671 DLTPEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLIST 730
+ + + + + H+D + G LE + F L++ P K + +++I
Sbjct: 522 NYSTVDAMTINQHLDTLAAVGLELE----SFGQNSFILRSHPTWFKEGQEEDTAEEMIDW 577
Query: 731 LADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLAD 790
L N G+ ++ ++M TA M++ C+ +I L E + +L+ L
Sbjct: 578 LIKN-GKLTV-KEFRMKTA---------IMMS---CKRAIKANHHLDEREAKALLKRLPQ 623
Query: 791 LNSPWNCPHGRPTMRHLVD 809
+P+NCPHGRP H D
Sbjct: 624 CENPFNCPHGRPVTVHFND 642
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 43/62 (69%)
Query: 12 IRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCG 71
I ++ + ++I AG+VI+ +S VKELVENSLDA + ++I ++ G + +V+D+G G
Sbjct: 4 IHELDNILANQIAAGEVIERPASIVKELVENSLDAHSHRVDIIVENSGLDSVRVIDDGDG 63
Query: 72 IS 73
I+
Sbjct: 64 IA 65
Score = 44.3 bits (103), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 79/175 (45%), Gaps = 19/175 (10%)
Query: 73 SPNNFKVRAVFLCQAYALIAKGVRFVCTNTTGKNVKSVVLKTQGSSSLKDNIITVFGMNI 132
SP R + AL V F T+ G+ + ++ G+++L+ + ++G+
Sbjct: 163 SPQTELTRITDIINRLALANPAVAFSFTHN-GREL----FRSAGNNNLQQVVAAIYGVQA 217
Query: 133 YNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFV--NDRPVDLPKVSKLVNELY 190
+ ++ D KV GF+S P RQY + N R + + +L +
Sbjct: 218 GRKMLEIS-GADDDFKVSGFVSLPELTRA----SRQYITITINHRYI---RNFELTKAII 269
Query: 191 KGANSR----QYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSILHALREGLQE 241
+G S+ +YPIA++N + DVNV P KR+V S E ++ + E +++
Sbjct: 270 QGYESKLMVGRYPIAVINIDLDPVLVDVNVHPAKREVRLSKEQQLIKLIAETIRQ 324
>sp|B4SGC3|MUTL_PELPB DNA mismatch repair protein MutL OS=Pelodictyon phaeoclathratiforme
(strain DSM 5477 / BU-1) GN=mutL PE=3 SV=1
Length = 626
Score = 77.0 bits (188), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 91/189 (48%), Gaps = 23/189 (12%)
Query: 620 IGQFNLGFIIGKLDQDLFIVDQHAADEKYNFER---LSQSTVLNQQPLLRPLKLDLTPEE 676
I Q + ++I ++ L I+DQH A E+ +ER + V N Q LL P K++ P E
Sbjct: 442 IWQLHNKYLICQIKTGLMIIDQHVAHERVLYERAVDVMNQNVPNSQQLLFPQKVEFRPWE 501
Query: 677 -EVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQ 735
E+ + D+ R GF+L ++ VP K V ++D+I+ DN
Sbjct: 502 YEIFEEIREDLYRL-GFNL----RLFGNKTIMIEGVPQDVKPGSEVTILQDMIAEYQDNA 556
Query: 736 GECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPW 795
S K+D D++ S +CR++IM G L EM+ ++++L P+
Sbjct: 557 ------SKLKLDKRDNLA--------KSYSCRNAIMAGQKLSLEEMRSLIDNLFATREPY 602
Query: 796 NCPHGRPTM 804
+CPHGRP +
Sbjct: 603 SCPHGRPVI 611
Score = 60.5 bits (145), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 42/54 (77%)
Query: 19 VVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGI 72
V ++I AG+V++ +S VKEL+EN++DAGA I +A+K+ G+E ++VDNG G+
Sbjct: 11 VANKISAGEVVQRPASVVKELLENAIDAGADKITVAIKDAGKELIRIVDNGAGM 64
Score = 49.7 bits (117), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 143 KSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELYKGA-NSRQYPIA 201
++D ++G+L KP R L QYFFVN R V +S+ V + Y RQ P
Sbjct: 226 ENDYLSIKGYLGKPAMQKRRKLD--QYFFVNRRVVQNRMLSQAVQQAYGDLLVERQTPFV 283
Query: 202 IMNFIVPTRACDVNVTPDKRKVFFSDECSI 231
++ + DVNV P K ++ F DE ++
Sbjct: 284 LLFLTIDPSRIDVNVHPAKMEIRFDDERNV 313
>sp|B8E280|MUTL_DICTD DNA mismatch repair protein MutL OS=Dictyoglomus turgidum (strain
Z-1310 / DSM 6724) GN=mutL PE=3 SV=1
Length = 572
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 94/194 (48%), Gaps = 21/194 (10%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQST---VLNQQPLLRPLKLDLT 673
+++GQ +II + ++I+DQHAA E+ +E L + L +L PL ++++
Sbjct: 385 FRIVGQIFDNYIIVETKDRVYIIDQHAAHERIRYEELKKELSLGYLQNVEILFPLVIEVS 444
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
EE+ + + H D++ K FS E+ R+ VP+ + + F + +++L
Sbjct: 445 EEEKELLNKHKDLLEKFAFSWED----FGPYHIRIIRVPY-EFLKFDSKSIENLFQ---- 495
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNS 793
IIS D ++ ++ S AC S+I G+ L R EM+ ++ + +
Sbjct: 496 -----EIIS----DISEKDLSKLEDKIIKSMACHSAIRSGNILVREEMEVLINLIFERKI 546
Query: 794 PWNCPHGRPTMRHL 807
P CPHGRP + +
Sbjct: 547 PLTCPHGRPYIWEI 560
Score = 60.1 bits (144), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 67/129 (51%), Gaps = 4/129 (3%)
Query: 114 TQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVN 173
T G+ L+D + +F + I+N L + K + +EGF+SKPG+ +L + YF+VN
Sbjct: 198 TSGNGKLEDVVSLLFDIEIHNNLIFLQ-RKEGNYIIEGFISKPGKLI--SLKSQDYFYVN 254
Query: 174 DRPVDLPKVSKLVNELYKGANSRQY-PIAIMNFIVPTRACDVNVTPDKRKVFFSDECSIL 232
R V + + + E YK Y P +I+ +P DVNV P KR++ F E +
Sbjct: 255 RRWVRNNIILQAIKEGYKNRLLEGYFPFSIVFLTLPYHEVDVNVHPTKREIKFEKEKEVY 314
Query: 233 HALREGLQE 241
+ + ++E
Sbjct: 315 EFVSKAIKE 323
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 35/55 (63%)
Query: 22 RICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNN 76
+I AG+VI+ S VKELVENS+DAGA I + GE V+D+G G++ +
Sbjct: 14 KIAAGEVIERPVSVVKELVENSIDAGAKRITVEFINGGETLISVIDDGEGMTKED 68
>sp|A4SGM5|MUTL_PROVI DNA mismatch repair protein MutL OS=Prosthecochloris vibrioformis
(strain DSM 265) GN=mutL PE=3 SV=1
Length = 614
Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 96/189 (50%), Gaps = 23/189 (12%)
Query: 620 IGQFNLGFIIGKLDQDLFIVDQHAADEKYNFER---LSQSTVLNQQPLLRPLKLDLTPEE 676
I Q + ++I ++ L I+DQH A E+ +ER + +++V N Q LL P K++L P +
Sbjct: 430 IWQLHNKYLICQIKTGLMIIDQHVAHERVLYERAVDVMETSVPNSQQLLFPQKVELRPWD 489
Query: 677 EVVASMHMDIIRKNGFSLEEDPHALAGLR-FRLKAVPFSKKITFGVEDVKDLISTLADNQ 735
+ D + + GF+L +L G R ++ VP + V ++D+I+ ++N
Sbjct: 490 WEIFEEIRDDLYRLGFNL-----SLFGSRTVMIEGVPQDVRPGSEVSILQDMIAEYSENA 544
Query: 736 GECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPW 795
S K++ D++ S +CR++IM G L EM+ +++ L P+
Sbjct: 545 ------SKLKLEKRDNLA--------KSYSCRNAIMTGQKLSLQEMRSLIDSLFATRDPY 590
Query: 796 NCPHGRPTM 804
CPHGRP +
Sbjct: 591 CCPHGRPVI 599
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 41/56 (73%)
Query: 17 KGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGI 72
+ V ++I AG+V++ S VKEL+EN++DAGA I + + + G+E ++VDNGCG+
Sbjct: 9 ESVANKISAGEVVQRPVSVVKELLENAIDAGADRISVIISDAGKELVRIVDNGCGM 64
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 55/113 (48%), Gaps = 4/113 (3%)
Query: 120 LKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDL 179
L + + +G L PV ++D + GF+ +P R L QYFF+N R V
Sbjct: 204 LNERLDFFYGSGFAESLVPVT-EENDYISIRGFIGRPALQKRRRLD--QYFFINRRLVQN 260
Query: 180 PKVSKLVNELY-KGANSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFSDECSI 231
+S+ + + Y + RQ P A++ F + DVNV P K +V F DE S+
Sbjct: 261 RMLSQALQQAYGELLVERQAPFALLFFEMDPSRIDVNVHPAKLEVRFEDERSV 313
>sp|B3QW86|MUTL_CHLT3 DNA mismatch repair protein MutL OS=Chloroherpeton thalassium
(strain ATCC 35110 / GB-78) GN=mutL PE=3 SV=1
Length = 640
Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 97/196 (49%), Gaps = 27/196 (13%)
Query: 615 GRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFER---LSQSTVLNQQPLLRPLKLD 671
G+ + + Q + +I+ ++ L I+DQH A E+ +ER + +S V N Q LL P
Sbjct: 451 GQERFVWQLHNTYILTQIKSGLLIIDQHVAHERILYERAIAVMESNVPNSQQLLFPHSAK 510
Query: 672 LTPEE-EVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVED--VKDLI 728
L+ E +V+ + D+++ GFSL L ++ +P + G E+ + +++
Sbjct: 511 LSAWEFDVLKEIKTDLVQL-GFSL----RILDQRTVLVEGIP--PDVMPGREERILHEML 563
Query: 729 STLADNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHL 788
D Q + K++ D+V S ACRSSIM G L RNEM +++ L
Sbjct: 564 EQYQDYQ------QNLKLEQRDNVA--------KSYACRSSIMAGQKLSRNEMTSLIDQL 609
Query: 789 ADLNSPWNCPHGRPTM 804
+ P+ CPHGRP +
Sbjct: 610 FATSMPYVCPHGRPII 625
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 43/55 (78%)
Query: 19 VVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGIS 73
V ++I AG+V++ +SAVKEL+EN++DAGA I +A+K G+ QV+DNGCG+S
Sbjct: 11 VANKISAGEVVQRPASAVKELLENAIDAGADEITLAIKAAGKTLIQVIDNGCGLS 65
Score = 43.5 bits (101), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Query: 143 KSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELY-KGANSRQYPIA 201
++D K+ G+L KP + ++Q+ F+N+R +S + Y + R+YP
Sbjct: 226 ENDFMKLRGYLGKPAMM--KRTKNQQFLFINNRVTQSKLLSSAIMTAYGELLGEREYPFF 283
Query: 202 IMNFIVPTRACDVNVTPDKRKVFFSDECSILHAL 235
++ + DVNV P K +V F DE +I + +
Sbjct: 284 LIYMDIAPHYIDVNVHPTKMEVKFDDERNIYNMV 317
>sp|A5D2K5|MUTL_PELTS DNA mismatch repair protein MutL OS=Pelotomaculum thermopropionicum
(strain DSM 13744 / JCM 10971 / SI) GN=mutL PE=3 SV=1
Length = 605
Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 80/192 (41%), Gaps = 18/192 (9%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFER-LSQSTVLNQQPLLRPLKLDLTPE 675
+ + F +I+ + L+IVDQHAA E+ +E LS Q LL P+ L+L
Sbjct: 420 LNALAHFPPVYILAGGEDGLYIVDQHAAHERIIYEEILSSGRTRPSQYLLVPVMLELDYR 479
Query: 676 EEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQ 735
E + + GF +E G F L+ VPF E + DL+
Sbjct: 480 EASILIERIIWFTDAGFVIEH----FGGNTFLLRGVPFELPAGQEREIILDLLDYFESKG 535
Query: 736 GECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPW 795
+ +K A S ACRS++ G+ L M +L+ L+ SP+
Sbjct: 536 TGAGMTDFFKWAAA-------------SIACRSAVRAGEKLSLPSMNALLQRLSGTASPY 582
Query: 796 NCPHGRPTMRHL 807
CPHGRP + L
Sbjct: 583 TCPHGRPVVIKL 594
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 38/56 (67%)
Query: 22 RICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNNF 77
+I AG+V++ S VKELVENS+DAGA I + L+ G + V+D+GCG+S +
Sbjct: 14 QIAAGEVVERPVSVVKELVENSIDAGAGRIVVELEGGGLQAISVLDDGCGMSEEDL 69
Score = 43.5 bits (101), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 6/120 (5%)
Query: 111 VLKTQGSSSLKDNIITVFGMNIYNCLEPVAI-CKSDSCKVEGFLSKPGQGSGRNLGDRQY 169
V + GS +L D++ V+G I E +A+ ++ + G+L KP R+
Sbjct: 196 VFYSPGSGNLIDSLAAVYGRQI--AAEMIAVKAVAEGLSINGYLGKPSLS--RSTRSHIT 251
Query: 170 FFVNDRPVDLPKVSKLVNELYKGANSR-QYPIAIMNFIVPTRACDVNVTPDKRKVFFSDE 228
+N R V P +++ + Y SR + P+A+++ V DVN+ P K +V +E
Sbjct: 252 VIINGRYVRCPAIAEAIEGAYGTLLSRGRRPVAVLSLSVSPELLDVNIHPAKLEVRLLEE 311
>sp|Q8KAX3|MUTL_CHLTE DNA mismatch repair protein MutL OS=Chlorobium tepidum (strain ATCC
49652 / DSM 12025 / TLS) GN=mutL PE=3 SV=1
Length = 624
Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 89/191 (46%), Gaps = 21/191 (10%)
Query: 620 IGQFNLGFIIGKLDQDLFIVDQHAADEKYNFER---LSQSTVLNQQPLLRPLKLDLTPEE 676
I Q + +II ++ L I+DQH A E+ +ER + N Q LL P K+DL P +
Sbjct: 440 IWQLHNKYIICQIKTGLMIIDQHVAHERVLYERAIDIMNEAAPNSQQLLFPQKIDLKPWQ 499
Query: 677 EVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQG 736
V D + + GF++ G+ ++ VP + ++D+I+ +N
Sbjct: 500 YEVFEEISDELYRLGFNI----RPFGGMSVMIEGVPPDVRDGAEATILQDMIAEYQENAA 555
Query: 737 ECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWN 796
+ K++ D++ S +CR++IM G L EM+ +++ L P+
Sbjct: 556 KL------KLEKRDNLA--------KSYSCRNAIMTGQKLSVEEMRMLIDRLFATRMPYV 601
Query: 797 CPHGRPTMRHL 807
CPHGRP + L
Sbjct: 602 CPHGRPVIIRL 612
Score = 63.9 bits (154), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 44/58 (75%)
Query: 19 VVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGISPNN 76
V ++I AG+V++ +S VKEL+ENS+DAGA+ I + +K+ G + Q++DNGCG+ ++
Sbjct: 11 VANKISAGEVVQRPASVVKELIENSIDAGASRITVIIKDAGRQLVQIIDNGCGMESDD 68
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 143 KSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELY-KGANSRQYPIA 201
++D + G+L KPG + QYFF+N R + + + V + Y + RQ P A
Sbjct: 226 ENDYMTIGGYLGKPGMMVRQKYD--QYFFINRRLIQNRMLVQAVQQAYGELLEERQSPFA 283
Query: 202 IMNFIVPTRACDVNVTPDKRKVFFSDECSI 231
++ + DVNV P K +V F DE SI
Sbjct: 284 LLFLGLDPSLVDVNVHPAKLEVRFEDEKSI 313
>sp|B5YE42|MUTL_DICT6 DNA mismatch repair protein MutL OS=Dictyoglomus thermophilum
(strain ATCC 35947 / DSM 3960 / H-6-12) GN=mutL PE=3
SV=1
Length = 575
Score = 75.5 bits (184), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 96/194 (49%), Gaps = 21/194 (10%)
Query: 617 MKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLSQST---VLNQQPLLRPLKLDLT 673
+++GQ +II + ++I+DQHAA E+ +E L + + +L P+ ++++
Sbjct: 388 FRIVGQIFDNYIILETKDKVYIIDQHAAHERIKYEELKEELNLGYIQNVEILFPVVIEVS 447
Query: 674 PEEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLAD 733
EE+++ + D++ + FS E+ R+ VP+ + + F + +++L
Sbjct: 448 EEEKILLDKYKDLLERFAFSWED----FGPYHIRIVKVPY-EFLNFDSKSIENLFR---- 498
Query: 734 NQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNS 793
IIS D ++ ++ S AC S++ G+ L R EM+ +++ + + N
Sbjct: 499 -----EIIS----DISEKDLSKLEDKIIKSMACHSAVRSGNILIREEMEMLIKLIFEKNI 549
Query: 794 PWNCPHGRPTMRHL 807
P CPHGRP + +
Sbjct: 550 PLTCPHGRPYIWEI 563
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 65/133 (48%), Gaps = 8/133 (6%)
Query: 114 TQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDRQYFFVN 173
T G L++ I +F + + L + D C +EGF+SKPG+ L + YF+VN
Sbjct: 198 TPGDGDLENLISLLFDIRVQESLISFQKREGDYC-IEGFVSKPGKLIA--LKSQDYFYVN 254
Query: 174 DRPVDLPKVSKLVNELYKGANSRQY-PIAIMNFIVPTRACDVNVTPDKRKVFFSDECS-- 230
R V + + + E YKG Y P +I+ VP DVNV P KR+V F E
Sbjct: 255 RRWVRNNTILQAIREGYKGRILDGYFPFSIIFLTVPYSEVDVNVHPTKREVKFQKEKEVY 314
Query: 231 --ILHALREGLQE 241
+ ++RE L E
Sbjct: 315 EFVFRSIREALDE 327
Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 36/53 (67%)
Query: 21 HRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGCGIS 73
++I AG+V++ S VKELVENS+DAGAT I + GE V+D+G G++
Sbjct: 13 NKIAAGEVVERPVSVVKELVENSIDAGATRIIVEFANGGETLISVIDDGEGMT 65
>sp|B3QL59|MUTL_CHLP8 DNA mismatch repair protein MutL OS=Chlorobaculum parvum (strain
NCIB 8327) GN=mutL PE=3 SV=1
Length = 626
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 90/191 (47%), Gaps = 21/191 (10%)
Query: 620 IGQFNLGFIIGKLDQDLFIVDQHAADEKYNFER---LSQSTVLNQQPLLRPLKLDLTPEE 676
I Q + +II ++ L I+DQH A E+ +ER + V N Q LL P K+DL P +
Sbjct: 442 IWQLHNKYIICQIKTGLMIIDQHVAHERVLYERAIDVMNEAVPNSQQLLFPQKIDLKPWQ 501
Query: 677 EVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVEDVKDLISTLADNQG 736
V + + + GF++ GL ++ VP + ++D+I+ +N
Sbjct: 502 YEVYEEISEELYRLGFTI----RPFGGLSVMIEGVPPDVRDGNEATILQDMIAEYQENA- 556
Query: 737 ECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLNSPWN 796
S K++ D++ S +CR++IM G L +M+ +++ L P+
Sbjct: 557 -----SKLKLEKRDNLA--------KSYSCRNAIMTGQKLDVEQMRMLIDRLFATRMPYV 603
Query: 797 CPHGRPTMRHL 807
CPHGRP + L
Sbjct: 604 CPHGRPVIIRL 614
Score = 64.3 bits (155), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 47/63 (74%)
Query: 10 PTIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNG 69
P+I + V ++I AG+V++ +S VKEL+ENS+D+GA++I + +KE G + +++DNG
Sbjct: 2 PSIAKLPDIVANKISAGEVVQRPASVVKELLENSIDSGASAITVVIKEAGRQLVRIIDNG 61
Query: 70 CGI 72
CG+
Sbjct: 62 CGM 64
Score = 44.3 bits (103), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 45/90 (50%), Gaps = 3/90 (3%)
Query: 143 KSDSCKVEGFLSKPGQGSGRNLGDRQYFFVNDRPVDLPKVSKLVNELY-KGANSRQYPIA 201
++D + G+L KPG + QYF++N R + + + V + Y + RQ P A
Sbjct: 226 ENDYMTIGGYLGKPGMMVRQKYD--QYFYINRRLIQNRMLVQAVQQAYAELLEERQSPFA 283
Query: 202 IMNFIVPTRACDVNVTPDKRKVFFSDECSI 231
++ + DVNV P K +V F DE SI
Sbjct: 284 LLFLGLDPSLVDVNVHPAKLEVKFEDEKSI 313
>sp|B0TB10|MUTL_HELMI DNA mismatch repair protein MutL OS=Heliobacterium modesticaldum
(strain ATCC 51547 / Ice1) GN=mutL PE=3 SV=1
Length = 660
Score = 74.7 bits (182), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 90/192 (46%), Gaps = 28/192 (14%)
Query: 620 IGQFNLGFIIGKLDQDLFIVDQHAADEKYNF----ER-LSQSTVLNQQPLLRPLKLDLTP 674
IGQF +I+ + L++VDQHAA E+ + ER L+++ V Q LL P+ + LTP
Sbjct: 475 IGQFRRSYILAEGGDTLYLVDQHAAHERVLYHGLKERYLNEAGVCASQQLLLPVTVTLTP 534
Query: 675 EEEVVASMHMDIIRKNGFSLEEDPHALAGLRFRLKAVPFSKKITFGVED--VKDLISTLA 732
E A + +R G +E G ++AVP + G E +D++++L
Sbjct: 535 AEFQGAMEAIAELRDAGLIVEH----FGGNTLLIRAVPVG--LPPGEEKGFFRDILNSLM 588
Query: 733 DNQGECSIISSYKMDTADSVCPSRVRAMLASRACRSSIMIGDALGRNEMQKILEHLADLN 792
+ +I RA L+S ACR ++ G + EM +L+ LA L
Sbjct: 589 KGLRDREVIR---------------RAALSSMACRGAVKAGQVMSHAEMGALLQQLARLE 633
Query: 793 SPWNCPHGRPTM 804
CPHGRP +
Sbjct: 634 GVDTCPHGRPYL 645
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 50/66 (75%)
Query: 11 TIRPINKGVVHRICAGQVIKDLSSAVKELVENSLDAGATSIEIALKEYGEEWFQVVDNGC 70
I+ ++ V++I AG+V++ +S VKEL+EN+LDAGAT I+I L E G++ +++DNGC
Sbjct: 3 VIQRLDTHTVNQIAAGEVVERPASIVKELLENALDAGATRIDITLAEGGKKLIRIIDNGC 62
Query: 71 GISPNN 76
G++ ++
Sbjct: 63 GMAADD 68
Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 60/122 (49%), Gaps = 3/122 (2%)
Query: 108 KSVVLKTQGSSSLKDNIITVFGMNIYNCLEPVAICKSDSCKVEGFLSKPGQGSGRNLGDR 167
K + ++ G++ + + VFG I + L P++ D + GF+ P RN +
Sbjct: 193 KQISFRSPGNNKPLETLSAVFGREIISFLLPLSAVAPDGWTLRGFIGSPSL--HRNNRNH 250
Query: 168 QYFFVNDRPVDLPKVSKLVNELYKGA-NSRQYPIAIMNFIVPTRACDVNVTPDKRKVFFS 226
Q +FVN R V +S+ V E Y G ++P +++ +P + DVN P K+++ F
Sbjct: 251 QNWFVNQRWVRCRILSQAVEEAYHGMLPGGRFPFFVLHLELPPQTIDVNSHPTKQEIKFD 310
Query: 227 DE 228
E
Sbjct: 311 RE 312
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.131 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 302,371,725
Number of Sequences: 539616
Number of extensions: 13035358
Number of successful extensions: 37570
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 468
Number of HSP's successfully gapped in prelim test: 56
Number of HSP's that attempted gapping in prelim test: 35587
Number of HSP's gapped (non-prelim): 1524
length of query: 824
length of database: 191,569,459
effective HSP length: 126
effective length of query: 698
effective length of database: 123,577,843
effective search space: 86257334414
effective search space used: 86257334414
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 66 (30.0 bits)