BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041467
(746 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 97/219 (44%), Gaps = 31/219 (14%)
Query: 449 RRKKPAHKDSNMLSMKQ------QFPMISHAELSKATNNFSPANKIREGGFNIVYN---- 498
RRKKP ++ + + Q S EL A++NFS N + GGF VY
Sbjct: 1 RRKKPQDHFFDVPAEEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLA 60
Query: 499 ----VAMKVANLKQKEASR-SFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNG 553
VA+K ++ + F E + HRNL+++ C + + ++NG
Sbjct: 61 DGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANG 120
Query: 554 QLRLC---------NLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVV 604
+ C L +R IA+ A + YL HC P I+H D+K +NILLD++
Sbjct: 121 SVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFE 180
Query: 605 THVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAP 643
VGD GLAK + + + GT+G++AP
Sbjct: 181 AVVGDFGLAKLM-------DYKDXHVXXAVRGTIGHIAP 212
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 86/196 (43%), Gaps = 25/196 (12%)
Query: 466 QFPMISHAELSKATNNFSPANKIREGGFNIVYN--------VAMKVANLKQKEASR-SFA 516
Q S EL A++NF N + GGF VY VA+K ++ + F
Sbjct: 16 QLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQ 75
Query: 517 AEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLRLC---------NLSLTQRVN 567
E + HRNL+++ C + + ++NG + C L +R
Sbjct: 76 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQR 135
Query: 568 IAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAET 627
IA+ A + YL HC P I+H D+K +NILLD++ VGD GLAK + +
Sbjct: 136 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLM-------DYKD 188
Query: 628 ASSSIGINGTVGYVAP 643
+ G +G++AP
Sbjct: 189 XHVXXAVRGXIGHIAP 204
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 165/375 (44%), Gaps = 46/375 (12%)
Query: 20 LRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLV 79
L+++ + N +G++ + R ++LE L +S+N+FS IP L S L L N L
Sbjct: 177 LKHLAISGNKISGDV--DVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLS 233
Query: 80 RDILTEICSLFKLERLRIDCG---GRIDXXXXXXXXXXXXXXXXXXXXXXN-----ASSL 131
D I + +L+ L I G I + +L
Sbjct: 234 GDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTL 293
Query: 132 EMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFN 191
++ S N F G V F L L L NN + EL LL L+ L +
Sbjct: 294 TGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNF----SGELPMDTLLK-MRGLKVLDLS 348
Query: 192 RNGFEGVLPHSIANLSSTIKQIAMGSNRISSTI-PHGIRNLVN-LNWLTMESSQLIGTIP 249
N F G LP S+ NLS+++ + + SN S I P+ +N N L L ++++ G IP
Sbjct: 349 FNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIP 408
Query: 250 PLIGETPNLQLLNIGGNHLQGSILSSLGNL-------------------------TLQTY 284
P + L L++ N+L G+I SSLG+L TL+T
Sbjct: 409 PTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETL 468
Query: 285 L--FNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTXXXXXXXXXXXXXGSL 342
+ FN+L G IPS L+NC +L +S+S+N+LT +P+ I + G++
Sbjct: 469 ILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLEN-LAILKLSNNSFSGNI 527
Query: 343 PPEVGNLKNLLRLHI 357
P E+G+ ++L+ L +
Sbjct: 528 PAELGDCRSLIWLDL 542
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 127/297 (42%), Gaps = 67/297 (22%)
Query: 28 NGFNGEIPHQ-IGRLISLERLILSNNSFSCAIPANLSS-GSNLIKLSTDSNNLVRDILTE 85
N F+GE+P + ++ L+ L LS N FS +P +L++ ++L+ L SNN IL
Sbjct: 325 NNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPN 384
Query: 86 ICSLFKLERLRIDCGGRIDXXXXXXXXXXXXXXXXXXXXXXNASSLEMIEFSRNQFSGGV 145
+C K ++L+ + N F+G +
Sbjct: 385 LCQNPK-------------------------------------NTLQELYLQNNGFTGKI 407
Query: 146 SVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIAN 205
S L L+L N L SGT + L + SKL L N EG +P +
Sbjct: 408 PPTLSNCSELVSLHLSFNYL-SGT-----IPSSLGSLSKLRDLKLWLNMLEGEIPQELMY 461
Query: 206 LSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGG 265
+ T++ + + N ++ IP G+ N NLNW+++ +++L G IP IG NL +L +
Sbjct: 462 VK-TLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSN 520
Query: 266 NHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQIL 322
N + GNIP+ L +C+SL+ L ++ N T+P +
Sbjct: 521 N---------------------SFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMF 556
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 138/348 (39%), Gaps = 69/348 (19%)
Query: 20 LRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLV 79
L+ + L NNGF G+IP + L L LS N S IP++L S S L L N L
Sbjct: 393 LQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLE 452
Query: 80 RDILTEICSLFKLERLRIDCGGRIDXXXXXXXXXXXXXXXXXXXXXXNASSLEMIEFSRN 139
+I E+ + LE L +D N ++L I S N
Sbjct: 453 GEIPQELMYVKTLETLILD---------------FNDLTGEIPSGLSNCTNLNWISLSNN 497
Query: 140 QFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVL 199
+ +G + RL+NL+ L L N+ EL +C L L N N F G +
Sbjct: 498 RLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELG------DCRSLIWLDLNTNLFNGTI 551
Query: 200 PHSIANLSSTI------------------KQIAMGS--------------NRISSTIPHG 227
P ++ S I K+ G+ NR+S+ P
Sbjct: 552 PAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCN 611
Query: 228 IRNLV-------------NLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILS 274
I + V ++ +L M + L G IP IG P L +LN+G N + GSI
Sbjct: 612 ITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPD 671
Query: 275 SLGNLTLQTYL---FNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQ 319
+G+L L N L G IP +++ L + +S+N L+ +P+
Sbjct: 672 EVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPE 719
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 120/269 (44%), Gaps = 28/269 (10%)
Query: 131 LEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYF 190
L+ + S N+ SG VD SR NL +L++ NN +G I L +CS L+ L
Sbjct: 177 LKHLAISGNKISG--DVDVSRCVNLEFLDVSSNNFSTG-------IPFLGDCSALQHLDI 227
Query: 191 NRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPP 250
+ N G +I+ + +K + + SN+ IP L +L +L++ ++ G IP
Sbjct: 228 SGNKLSGDFSRAISTCTE-LKLLNISSNQFVGPIPP--LPLKSLQYLSLAENKFTGEIPD 284
Query: 251 LI-GETPNLQLLNIGGNHLQGSILSSLGNLTLQTYLF---NNLQGNIP-SSLANCKSLLG 305
+ G L L++ GNH G++ G+ +L L NN G +P +L + L
Sbjct: 285 FLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKV 344
Query: 306 LSVSHNKLTSTLPQQILSVTTXXXXXXXXXXXXXGSLPPEV-GNLKNLLRL--------- 355
L +S N+ + LP+ + +++ G + P + N KN L+
Sbjct: 345 LDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFT 404
Query: 356 -HIPEYPENLSFFELLNLSYNYFGSEVPT 383
IP N S L+LS+NY +P+
Sbjct: 405 GKIPPTLSNCSELVSLHLSFNYLSGTIPS 433
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 107/255 (41%), Gaps = 24/255 (9%)
Query: 18 TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNN 77
T L +I+L NN GEIP IGRL +L L LSNNSFS IPA L +LI L ++N
Sbjct: 487 TNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNL 546
Query: 78 LVRDILTEICSLFKLERLRIDCGGRIDXXXXXXXXXXXXXXXXXXXXXXNASSLEMIEFS 137
I ++FK G+I A +L
Sbjct: 547 FNGTI---PAAMFKQS-------GKIAANFIAGKRYVYIKNDGMKKECHGAGNLL----- 591
Query: 138 RNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEG 197
+F G S +RL + N+ G T+ D N + L + N G
Sbjct: 592 --EFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFD------NNGSMMFLDMSYNMLSG 643
Query: 198 VLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPN 257
+P I ++ + + +G N IS +IP + +L LN L + S++L G IP +
Sbjct: 644 YIPKEIGSM-PYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTM 702
Query: 258 LQLLNIGGNHLQGSI 272
L +++ N+L G I
Sbjct: 703 LTEIDLSNNNLSGPI 717
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 104/375 (27%), Positives = 165/375 (44%), Gaps = 46/375 (12%)
Query: 20 LRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLV 79
L+++ + N +G++ + R ++LE L +S+N+FS IP L S L L N L
Sbjct: 180 LKHLAISGNKISGDV--DVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLS 236
Query: 80 RDILTEICSLFKLERLRIDCG---GRIDXXXXXXXXXXXXXXXXXXXXXXN-----ASSL 131
D I + +L+ L I G I + +L
Sbjct: 237 GDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTL 296
Query: 132 EMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFN 191
++ S N F G V F L L L NN + EL LL L+ L +
Sbjct: 297 TGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNF----SGELPMDTLLK-MRGLKVLDLS 351
Query: 192 RNGFEGVLPHSIANLSSTIKQIAMGSNRISSTI-PHGIRNLVN-LNWLTMESSQLIGTIP 249
N F G LP S+ NLS+++ + + SN S I P+ +N N L L ++++ G IP
Sbjct: 352 FNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIP 411
Query: 250 PLIGETPNLQLLNIGGNHLQGSILSSLGNL-------------------------TLQTY 284
P + L L++ N+L G+I SSLG+L TL+T
Sbjct: 412 PTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETL 471
Query: 285 L--FNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTXXXXXXXXXXXXXGSL 342
+ FN+L G IPS L+NC +L +S+S+N+LT +P+ I + G++
Sbjct: 472 ILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLEN-LAILKLSNNSFSGNI 530
Query: 343 PPEVGNLKNLLRLHI 357
P E+G+ ++L+ L +
Sbjct: 531 PAELGDCRSLIWLDL 545
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 127/297 (42%), Gaps = 67/297 (22%)
Query: 28 NGFNGEIPHQ-IGRLISLERLILSNNSFSCAIPANLSS-GSNLIKLSTDSNNLVRDILTE 85
N F+GE+P + ++ L+ L LS N FS +P +L++ ++L+ L SNN IL
Sbjct: 328 NNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPN 387
Query: 86 ICSLFKLERLRIDCGGRIDXXXXXXXXXXXXXXXXXXXXXXNASSLEMIEFSRNQFSGGV 145
+C K ++L+ + N F+G +
Sbjct: 388 LCQNPK-------------------------------------NTLQELYLQNNGFTGKI 410
Query: 146 SVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIAN 205
S L L+L N L SGT + L + SKL L N EG +P +
Sbjct: 411 PPTLSNCSELVSLHLSFNYL-SGT-----IPSSLGSLSKLRDLKLWLNMLEGEIPQELMY 464
Query: 206 LSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGG 265
+ T++ + + N ++ IP G+ N NLNW+++ +++L G IP IG NL +L +
Sbjct: 465 VK-TLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSN 523
Query: 266 NHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQIL 322
N + GNIP+ L +C+SL+ L ++ N T+P +
Sbjct: 524 N---------------------SFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMF 559
Score = 72.4 bits (176), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 138/348 (39%), Gaps = 69/348 (19%)
Query: 20 LRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLV 79
L+ + L NNGF G+IP + L L LS N S IP++L S S L L N L
Sbjct: 396 LQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLE 455
Query: 80 RDILTEICSLFKLERLRIDCGGRIDXXXXXXXXXXXXXXXXXXXXXXNASSLEMIEFSRN 139
+I E+ + LE L +D N ++L I S N
Sbjct: 456 GEIPQELMYVKTLETLILD---------------FNDLTGEIPSGLSNCTNLNWISLSNN 500
Query: 140 QFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVL 199
+ +G + RL+NL+ L L N+ EL +C L L N N F G +
Sbjct: 501 RLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELG------DCRSLIWLDLNTNLFNGTI 554
Query: 200 PHSIANLSSTI------------------KQIAMGS--------------NRISSTIPHG 227
P ++ S I K+ G+ NR+S+ P
Sbjct: 555 PAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCN 614
Query: 228 IRNLV-------------NLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILS 274
I + V ++ +L M + L G IP IG P L +LN+G N + GSI
Sbjct: 615 ITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPD 674
Query: 275 SLGNLTLQTYL---FNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQ 319
+G+L L N L G IP +++ L + +S+N L+ +P+
Sbjct: 675 EVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPE 722
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 120/269 (44%), Gaps = 28/269 (10%)
Query: 131 LEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYF 190
L+ + S N+ SG VD SR NL +L++ NN +G I L +CS L+ L
Sbjct: 180 LKHLAISGNKISG--DVDVSRCVNLEFLDVSSNNFSTG-------IPFLGDCSALQHLDI 230
Query: 191 NRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPP 250
+ N G +I+ + +K + + SN+ IP L +L +L++ ++ G IP
Sbjct: 231 SGNKLSGDFSRAISTCTE-LKLLNISSNQFVGPIPP--LPLKSLQYLSLAENKFTGEIPD 287
Query: 251 LI-GETPNLQLLNIGGNHLQGSILSSLGNLTLQTYLF---NNLQGNIP-SSLANCKSLLG 305
+ G L L++ GNH G++ G+ +L L NN G +P +L + L
Sbjct: 288 FLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKV 347
Query: 306 LSVSHNKLTSTLPQQILSVTTXXXXXXXXXXXXXGSLPPEV-GNLKNLLRL--------- 355
L +S N+ + LP+ + +++ G + P + N KN L+
Sbjct: 348 LDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFT 407
Query: 356 -HIPEYPENLSFFELLNLSYNYFGSEVPT 383
IP N S L+LS+NY +P+
Sbjct: 408 GKIPPTLSNCSELVSLHLSFNYLSGTIPS 436
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 107/255 (41%), Gaps = 24/255 (9%)
Query: 18 TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNN 77
T L +I+L NN GEIP IGRL +L L LSNNSFS IPA L +LI L ++N
Sbjct: 490 TNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNL 549
Query: 78 LVRDILTEICSLFKLERLRIDCGGRIDXXXXXXXXXXXXXXXXXXXXXXNASSLEMIEFS 137
I ++FK G+I A +L
Sbjct: 550 FNGTI---PAAMFKQS-------GKIAANFIAGKRYVYIKNDGMKKECHGAGNLL----- 594
Query: 138 RNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEG 197
+F G S +RL + N+ G T+ D N + L + N G
Sbjct: 595 --EFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFD------NNGSMMFLDMSYNMLSG 646
Query: 198 VLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPN 257
+P I ++ + + +G N IS +IP + +L LN L + S++L G IP +
Sbjct: 647 YIPKEIGSM-PYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTM 705
Query: 258 LQLLNIGGNHLQGSI 272
L +++ N+L G I
Sbjct: 706 LTEIDLSNNNLSGPI 720
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 90/205 (43%), Gaps = 38/205 (18%)
Query: 466 QFPMISHAELSKATNNFSP------ANKIREGGFNIVYN-------VAMK----VANLKQ 508
+F S EL TNNF NK+ EGGF +VY VA+K + ++
Sbjct: 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITT 70
Query: 509 KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQL--RLC------NL 560
+E + F E + +H NL++++ S D + + NG L RL L
Sbjct: 71 EELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPL 130
Query: 561 SLTQRVNIAIDVAFAIEYLR--HHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618
S R IA A I +L HH +H D+K +NILLD+ + D GLA+
Sbjct: 131 SWHMRCKIAQGAANGINFLHENHH-----IHRDIKSANILLDEAFTAKISDFGLARASEK 185
Query: 619 YEPGTTAETASSSIGINGTVGYVAP 643
+ A+T S I GT Y+AP
Sbjct: 186 F-----AQTVMXS-RIVGTTAYMAP 204
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 84/188 (44%), Gaps = 26/188 (13%)
Query: 473 AELSKATNNFSPANKIREGGFNIVYN--------VAMKVANLKQKEASRSFAAEFNALRN 524
+L +ATNNF I G F VY VA+K + + F E L
Sbjct: 32 VDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSF 91
Query: 525 IRHRNLIKIITICSSIDFEGFDFKAISNGQLR---------LCNLSLTQRVNIAIDVAFA 575
RH +L+ +I C + +K + NG L+ ++S QR+ I I A
Sbjct: 92 CRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARG 151
Query: 576 IEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGIN 635
+ YL H + +I+H D+K NILLD++ V + D G++K GT + +
Sbjct: 152 LHYL--HTR-AIIHRDVKSINILLDENFVPKITDFGISK------KGTELDQTHLXXVVK 202
Query: 636 GTVGYVAP 643
GT+GY+ P
Sbjct: 203 GTLGYIDP 210
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 89/205 (43%), Gaps = 38/205 (18%)
Query: 466 QFPMISHAELSKATNNFSP------ANKIREGGFNIVYN-------VAMK----VANLKQ 508
+F S EL TNNF NK+ EGGF +VY VA+K + ++
Sbjct: 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITT 70
Query: 509 KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQL--RLC------NL 560
+E + F E + +H NL++++ S D + + NG L RL L
Sbjct: 71 EELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPL 130
Query: 561 SLTQRVNIAIDVAFAIEYLR--HHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618
S R IA A I +L HH +H D+K +NILLD+ + D GLA+
Sbjct: 131 SWHMRCKIAQGAANGINFLHENHH-----IHRDIKSANILLDEAFTAKISDFGLARASEK 185
Query: 619 YEPGTTAETASSSIGINGTVGYVAP 643
+ A+T I GT Y+AP
Sbjct: 186 F-----AQTVMXX-RIVGTTAYMAP 204
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 83/188 (44%), Gaps = 26/188 (13%)
Query: 473 AELSKATNNFSPANKIREGGFNIVYN--------VAMKVANLKQKEASRSFAAEFNALRN 524
+L +ATNNF I G F VY VA+K + + F E L
Sbjct: 32 VDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSF 91
Query: 525 IRHRNLIKIITICSSIDFEGFDFKAISNGQLR---------LCNLSLTQRVNIAIDVAFA 575
RH +L+ +I C + +K + NG L+ ++S QR+ I I A
Sbjct: 92 CRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARG 151
Query: 576 IEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGIN 635
+ YL H + +I+H D+K NILLD++ V + D G++K GT +
Sbjct: 152 LHYL--HTR-AIIHRDVKSINILLDENFVPKITDFGISK------KGTELGQTHLXXVVK 202
Query: 636 GTVGYVAP 643
GT+GY+ P
Sbjct: 203 GTLGYIDP 210
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 89/208 (42%), Gaps = 44/208 (21%)
Query: 466 QFPMISHAELSKATNNFSP------ANKIREGGFNIVYN-------VAMK----VANLKQ 508
+F S EL TNNF NK+ EGGF +VY VA+K + ++
Sbjct: 5 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITT 64
Query: 509 KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQL--RLC------NL 560
+E + F E + +H NL++++ S D + + NG L RL L
Sbjct: 65 EELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPL 124
Query: 561 SLTQRVNIAIDVAFAIEYLR--HHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618
S R IA A I +L HH +H D+K +NILLD+ + D GLA+
Sbjct: 125 SWHMRCKIAQGAANGINFLHENHH-----IHRDIKSANILLDEAFTAKISDFGLAR---- 175
Query: 619 YEPGTTAETASSSI---GINGTVGYVAP 643
+E + + I GT Y+AP
Sbjct: 176 -----ASEKFAQXVMXXRIVGTTAYMAP 198
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 85/205 (41%), Gaps = 38/205 (18%)
Query: 466 QFPMISHAELSKATNNFSP------ANKIREGGFNIVYN-------VAMK----VANLKQ 508
+F S EL TNNF NK EGGF +VY VA+K + ++
Sbjct: 2 RFHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITT 61
Query: 509 KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQL--RLC------NL 560
+E + F E +H NL++++ S D + NG L RL L
Sbjct: 62 EELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPL 121
Query: 561 SLTQRVNIAIDVAFAIEYLR--HHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618
S R IA A I +L HH +H D+K +NILLD+ + D GLA+
Sbjct: 122 SWHXRCKIAQGAANGINFLHENHH-----IHRDIKSANILLDEAFTAKISDFGLARASEK 176
Query: 619 YEPGTTAETASSSIGINGTVGYVAP 643
+ A+ S I GT Y AP
Sbjct: 177 F-----AQXVXXS-RIVGTTAYXAP 195
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 89/195 (45%), Gaps = 29/195 (14%)
Query: 486 NKIREGGFNIVY-------NVAMKVANLKQKEASR--SFAAEFNALRNIRHRNLIKIITI 536
KI G F V+ +VA+K+ + A R F E ++ +RH N++ +
Sbjct: 43 EKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGA 102
Query: 537 CSSIDFEGFDFKAISNGQL-RLCN-------LSLTQRVNIAIDVAFAIEYLRHHCQPSIV 588
+ + +S G L RL + L +R+++A DVA + YL H+ P IV
Sbjct: 103 VTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYL-HNRNPPIV 161
Query: 589 HGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAA 648
H +LK N+L+D+ V D GL++ A T SS GT ++AP ++
Sbjct: 162 HRNLKSPNLLVDKKYTVKVCDFGLSRL--------KASTFLSSKSAAGTPEWMAPEVL-- 211
Query: 649 RNLENREKRHTVMSF 663
R+ + EK V SF
Sbjct: 212 RDEPSNEK-SDVYSF 225
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 103/255 (40%), Gaps = 34/255 (13%)
Query: 179 LTNCSKLERLYFNR-NGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWL 237
L N L LY N G +P +IA L+ + + + +S IP + + L L
Sbjct: 72 LANLPYLNFLYIGGINNLVGPIPPAIAKLTQ-LHYLYITHTNVSGAIPDFLSQIKTLVTL 130
Query: 238 TMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGN----LTLQTYLFNNLQGNI 293
+ L GT+PP I PNL + GN + G+I S G+ T T N L G I
Sbjct: 131 DFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKI 190
Query: 294 PSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTXXXXXXXXXXXXXGSLPPEVGNL---K 350
P + AN L+++ L+ + + SV SL ++G + K
Sbjct: 191 PPTFAN------LNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSK 244
Query: 351 NLLRLH---------IPEYPENLSFFELLNLSYNYFGSEVPTKGVFNNKTRFSI---IGN 398
NL L +P+ L F LN+S+N E+P G N RF + N
Sbjct: 245 NLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGG---NLQRFDVSAYANN 301
Query: 399 GKLCGGLDELHLPSC 413
LCG LP+C
Sbjct: 302 KCLCGS----PLPAC 312
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/246 (23%), Positives = 98/246 (39%), Gaps = 47/246 (19%)
Query: 4 NNLLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLS 63
NNL+ P T L Y+ + + +G IP + ++ +L L S N+ S +P ++S
Sbjct: 87 NNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSIS 146
Query: 64 SGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDCGGRIDXXXXXXXXXXXXXXXXXXX 123
S NL+ ++ D N + I S KL
Sbjct: 147 SLPNLVGITFDGNRISGAIPDSYGSFSKL------------------------------- 175
Query: 124 XXXNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCS 183
+ SRN+ +G + F+ L NL++++L N L E D L +
Sbjct: 176 -------FTSMTISRNRLTGKIPPTFANL-NLAFVDLSRNML------EGDASVLFGSDK 221
Query: 184 KLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQ 243
++++ +N L LS + + + +NRI T+P G+ L L+ L + +
Sbjct: 222 NTQKIHLAKNSLAFDL--GKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNN 279
Query: 244 LIGTIP 249
L G IP
Sbjct: 280 LCGEIP 285
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 87/195 (44%), Gaps = 29/195 (14%)
Query: 486 NKIREGGFNIVY-------NVAMKVANLKQKEASR--SFAAEFNALRNIRHRNLIKIITI 536
KI G F V+ +VA+K+ + A R F E ++ +RH N++ +
Sbjct: 43 EKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGA 102
Query: 537 CSSIDFEGFDFKAISNGQL-RLCN-------LSLTQRVNIAIDVAFAIEYLRHHCQPSIV 588
+ + +S G L RL + L +R+++A DVA + YL H+ P IV
Sbjct: 103 VTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYL-HNRNPPIV 161
Query: 589 HGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAA 648
H DLK N+L+D+ V D GL++ A S GT ++AP ++
Sbjct: 162 HRDLKSPNLLVDKKYTVKVCDFGLSRL--------KASXFLXSKXAAGTPEWMAPEVL-- 211
Query: 649 RNLENREKRHTVMSF 663
R+ + EK V SF
Sbjct: 212 RDEPSNEK-SDVYSF 225
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 85/207 (41%), Gaps = 37/207 (17%)
Query: 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEAS-------RSFAAEFNA 521
A N +I +GGF +V+ VA+K L E + F E
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 522 LRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLRLCN----LSLTQRVNIAIDVAFAIE 577
+ N+ H N++K+ + + +F + RL + + + ++ + +D+A IE
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIE 136
Query: 578 YLRHHCQPSIVHGDLKPSNILL-----DQDVVTHVGDLGLAKFLYGYEPGTTAETASSSI 632
Y+++ P IVH DL+ NI L + V V D GL++ ++ S
Sbjct: 137 YMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ-----------QSVHSVS 184
Query: 633 GINGTVGYVAPVIIAARNLENREKRHT 659
G+ G ++AP I A EK T
Sbjct: 185 GLLGNFQWMAPETIGAEEESYTEKADT 211
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 84/207 (40%), Gaps = 37/207 (17%)
Query: 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEAS-------RSFAAEFNA 521
A N +I +GGF +V+ VA+K L E + F E
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 522 LRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLRLCN----LSLTQRVNIAIDVAFAIE 577
+ N+ H N++K+ + + +F + RL + + + ++ + +D+A IE
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIE 136
Query: 578 YLRHHCQPSIVHGDLKPSNILL-----DQDVVTHVGDLGLAKFLYGYEPGTTAETASSSI 632
Y+++ P IVH DL+ NI L + V V D G T+ ++ S
Sbjct: 137 YMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG-----------TSQQSVHSVS 184
Query: 633 GINGTVGYVAPVIIAARNLENREKRHT 659
G+ G ++AP I A EK T
Sbjct: 185 GLLGNFQWMAPETIGAEEESYTEKADT 211
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 73/160 (45%), Gaps = 21/160 (13%)
Query: 499 VAMKVANLKQKEASR-SFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQL-- 555
VA+K K E S E L I+H N++ + I S + +S G+L
Sbjct: 46 VAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFD 105
Query: 556 RLCNLSL-TQR--VNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNIL---LDQDVVTHVGD 609
R+ T+R + V A++YL IVH DLKP N+L LD+D + D
Sbjct: 106 RIVEKGFYTERDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISD 162
Query: 610 LGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAAR 649
GL+K +PG+ TA GT GYVAP ++A +
Sbjct: 163 FGLSKM---EDPGSVLSTAC------GTPGYVAPEVLAQK 193
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 497 YNVAMKVANLKQKEAS-RSFAAEFNALRNIRHRNLIKIITICSSID--FEGFDFKAISN- 552
Y++ + V LK+ F E ++ I+H NL++++ +C+ + +F N
Sbjct: 38 YSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNL 97
Query: 553 -GQLRLCNLSLTQRVN------IAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVT 605
LR CN Q VN +A ++ A+EYL + + +H DL N L+ ++ +
Sbjct: 98 LDYLRECN---RQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLV 151
Query: 606 HVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIA 647
V D GL++ + T +T ++ G + + AP +A
Sbjct: 152 KVADFGLSRLM-------TGDTXTAHAGAKFPIKWTAPESLA 186
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 80/172 (46%), Gaps = 25/172 (14%)
Query: 487 KIREGGFNIVYNVAMKVANLKQKEAS-RSFAAEFNALRNIRHRNLIKIITICSSID--FE 543
++ EG + Y++ + V LK+ F E ++ I+H NL++++ +C+ +
Sbjct: 33 EVYEGVWK-KYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 91
Query: 544 GFDFKAISN--GQLRLCNLSLTQRVN------IAIDVAFAIEYLRHHCQPSIVHGDLKPS 595
+F N LR CN Q VN +A ++ A+EYL + + +H DL
Sbjct: 92 IIEFMTYGNLLDYLRECN---RQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAAR 145
Query: 596 NILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIA 647
N L+ ++ + V D GL++ + T +T ++ G + + AP +A
Sbjct: 146 NCLVGENHLVKVADFGLSRLM-------TGDTYTAHAGAKFPIKWTAPESLA 190
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 67/144 (46%), Gaps = 20/144 (13%)
Query: 514 SFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQL--RLCNLSL-TQR--VNI 568
S E L I+H N++ + I S + +S G+L R+ T+R +
Sbjct: 62 SMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL 121
Query: 569 AIDVAFAIEYLRHHCQPSIVHGDLKPSNIL---LDQDVVTHVGDLGLAKFLYGYEPGTTA 625
V A++YL IVH DLKP N+L LD+D + D GL+K +PG+
Sbjct: 122 IFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVL 175
Query: 626 ETASSSIGINGTVGYVAPVIIAAR 649
TA GT GYVAP ++A +
Sbjct: 176 STAC------GTPGYVAPEVLAQK 193
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 67/144 (46%), Gaps = 20/144 (13%)
Query: 514 SFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQL--RLCNLSL-TQR--VNI 568
S E L I+H N++ + I S + +S G+L R+ T+R +
Sbjct: 62 SMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL 121
Query: 569 AIDVAFAIEYLRHHCQPSIVHGDLKPSNIL---LDQDVVTHVGDLGLAKFLYGYEPGTTA 625
V A++YL IVH DLKP N+L LD+D + D GL+K +PG+
Sbjct: 122 IFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVL 175
Query: 626 ETASSSIGINGTVGYVAPVIIAAR 649
TA GT GYVAP ++A +
Sbjct: 176 STAC------GTPGYVAPEVLAQK 193
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 75/159 (47%), Gaps = 18/159 (11%)
Query: 497 YNVAMKVANLKQKEAS-RSFAAEFNALRNIRHRNLIKIITICSSID--FEGFDFKAISN- 552
Y++ + V LK+ F E ++ I+H NL++++ +C+ + +F N
Sbjct: 35 YSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNL 94
Query: 553 -GQLRLCN---LSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVG 608
LR CN +S + +A ++ A+EYL + + +H DL N L+ ++ + V
Sbjct: 95 LDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVA 151
Query: 609 DLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIA 647
D GL++ + T +T ++ G + + AP +A
Sbjct: 152 DFGLSRLM-------TGDTXTAHAGAKFPIKWTAPESLA 183
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 84/207 (40%), Gaps = 37/207 (17%)
Query: 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEAS-------RSFAAEFNA 521
A N +I +GGF +V+ VA+K L E + F E
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 522 LRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLRLCN----LSLTQRVNIAIDVAFAIE 577
+ N+ H N++K+ + + +F + RL + + + ++ + +D+A IE
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIE 136
Query: 578 YLRHHCQPSIVHGDLKPSNILL-----DQDVVTHVGDLGLAKFLYGYEPGTTAETASSSI 632
Y+++ P IVH DL+ NI L + V V D L++ ++ S
Sbjct: 137 YMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ-----------QSVHSVS 184
Query: 633 GINGTVGYVAPVIIAARNLENREKRHT 659
G+ G ++AP I A EK T
Sbjct: 185 GLLGNFQWMAPETIGAEEESYTEKADT 211
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 67/144 (46%), Gaps = 20/144 (13%)
Query: 514 SFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQL--RLCNLSL-TQR--VNI 568
S E L I+H N++ + I S + +S G+L R+ T+R +
Sbjct: 62 SMENEIAVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRL 121
Query: 569 AIDVAFAIEYLRHHCQPSIVHGDLKPSNIL---LDQDVVTHVGDLGLAKFLYGYEPGTTA 625
V A++YL IVH DLKP N+L LD+D + D GL+K +PG+
Sbjct: 122 IFQVLDAVKYLH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM---EDPGSVL 175
Query: 626 ETASSSIGINGTVGYVAPVIIAAR 649
TA GT GYVAP ++A +
Sbjct: 176 STAC------GTPGYVAPEVLAQK 193
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 75/159 (47%), Gaps = 18/159 (11%)
Query: 497 YNVAMKVANLKQKEAS-RSFAAEFNALRNIRHRNLIKIITICSSID--FEGFDFKAISN- 552
Y++ + V LK+ F E ++ I+H NL++++ +C+ + +F N
Sbjct: 37 YSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNL 96
Query: 553 -GQLRLCN---LSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVG 608
LR CN +S + +A ++ A+EYL + + +H DL N L+ ++ + V
Sbjct: 97 LDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVA 153
Query: 609 DLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIA 647
D GL++ + T +T ++ G + + AP +A
Sbjct: 154 DFGLSRLM-------TGDTYTAHAGAKFPIKWTAPESLA 185
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 75/159 (47%), Gaps = 18/159 (11%)
Query: 497 YNVAMKVANLKQKEAS-RSFAAEFNALRNIRHRNLIKIITICSSID--FEGFDFKAISN- 552
Y++ + V LK+ F E ++ I+H NL++++ +C+ + +F N
Sbjct: 37 YSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNL 96
Query: 553 -GQLRLCN---LSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVG 608
LR CN +S + +A ++ A+EYL + + +H DL N L+ ++ + V
Sbjct: 97 LDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVA 153
Query: 609 DLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIA 647
D GL++ + T +T ++ G + + AP +A
Sbjct: 154 DFGLSRLM-------TGDTYTAHAGAKFPIKWTAPESLA 185
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 79/188 (42%), Gaps = 40/188 (21%)
Query: 485 ANKIREGGFNIVY------NVAMKVANLKQK--EASRSFAAEFNALRNIRHRNLIKIITI 536
+I G F VY +VA+K+ N+ + ++F E LR RH N++
Sbjct: 15 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL---- 70
Query: 537 CSSIDFEGFDFKAISNGQLRLCN--------------LSLTQRVNIAIDVAFAIEYLRHH 582
F G+ K + C + + ++IA A ++YL H
Sbjct: 71 -----FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYL--H 123
Query: 583 CQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVA 642
+ SI+H DLK +NI L +D+ +GD GLA + E S G++ ++A
Sbjct: 124 AK-SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS------GSILWMA 176
Query: 643 PVIIAARN 650
P +I ++
Sbjct: 177 PEVIRMQD 184
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 79/188 (42%), Gaps = 40/188 (21%)
Query: 485 ANKIREGGFNIVY------NVAMKVANLKQK--EASRSFAAEFNALRNIRHRNLIKIITI 536
+I G F VY +VA+K+ N+ + ++F E LR RH N++
Sbjct: 18 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL---- 73
Query: 537 CSSIDFEGFDFKAISNGQLRLCN--------------LSLTQRVNIAIDVAFAIEYLRHH 582
F G+ K + C + + ++IA A ++YL H
Sbjct: 74 -----FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYL--H 126
Query: 583 CQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVA 642
+ SI+H DLK +NI L +D+ +GD GLA + E S G++ ++A
Sbjct: 127 AK-SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS------GSILWMA 179
Query: 643 PVIIAARN 650
P +I ++
Sbjct: 180 PEVIRMQD 187
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 79/188 (42%), Gaps = 40/188 (21%)
Query: 485 ANKIREGGFNIVY------NVAMKVANLKQK--EASRSFAAEFNALRNIRHRNLIKIITI 536
+I G F VY +VA+K+ N+ + ++F E LR RH N++
Sbjct: 18 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL---- 73
Query: 537 CSSIDFEGFDFKAISNGQLRLCN--------------LSLTQRVNIAIDVAFAIEYLRHH 582
F G+ K + C + + ++IA A ++YL H
Sbjct: 74 -----FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYL--H 126
Query: 583 CQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVA 642
+ SI+H DLK +NI L +D+ +GD GLA + E S G++ ++A
Sbjct: 127 AK-SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS------GSILWMA 179
Query: 643 PVIIAARN 650
P +I ++
Sbjct: 180 PEVIRMQD 187
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 80/172 (46%), Gaps = 25/172 (14%)
Query: 487 KIREGGFNIVYNVAMKVANLKQKEAS-RSFAAEFNALRNIRHRNLIKIITICSSID--FE 543
++ EG + Y++ + V LK+ F E ++ I+H NL++++ +C+ +
Sbjct: 33 EVYEGVWK-KYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 91
Query: 544 GFDFKAISN--GQLRLCNLSLTQRVN------IAIDVAFAIEYLRHHCQPSIVHGDLKPS 595
+F N LR CN Q VN +A ++ A+EYL + + +H DL
Sbjct: 92 ITEFMTYGNLLDYLRECN---RQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAAR 145
Query: 596 NILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIA 647
N L+ ++ + V D GL++ + T +T ++ G + + AP +A
Sbjct: 146 NCLVGENHLVKVADFGLSRLM-------TGDTXTAHAGAKFPIKWTAPESLA 190
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 79/188 (42%), Gaps = 40/188 (21%)
Query: 485 ANKIREGGFNIVY------NVAMKVANLKQK--EASRSFAAEFNALRNIRHRNLIKIITI 536
+I G F VY +VA+K+ N+ + ++F E LR RH N++
Sbjct: 40 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL---- 95
Query: 537 CSSIDFEGFDFKAISNGQLRLCN--------------LSLTQRVNIAIDVAFAIEYLRHH 582
F G+ K + C + + ++IA A ++YL H
Sbjct: 96 -----FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYL--H 148
Query: 583 CQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVA 642
+ SI+H DLK +NI L +D+ +GD GLA + E S G++ ++A
Sbjct: 149 AK-SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS------GSILWMA 201
Query: 643 PVIIAARN 650
P +I ++
Sbjct: 202 PEVIRMQD 209
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 80/172 (46%), Gaps = 25/172 (14%)
Query: 487 KIREGGFNIVYNVAMKVANLKQKEAS-RSFAAEFNALRNIRHRNLIKIITICSSID--FE 543
++ EG + Y++ + V LK+ F E ++ I+H NL++++ +C+ +
Sbjct: 33 EVYEGVWK-KYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 91
Query: 544 GFDFKAISN--GQLRLCNLSLTQRVN------IAIDVAFAIEYLRHHCQPSIVHGDLKPS 595
+F N LR CN Q VN +A ++ A+EYL + + +H DL
Sbjct: 92 ITEFMTYGNLLDYLRECN---RQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAAR 145
Query: 596 NILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIA 647
N L+ ++ + V D GL++ + T +T ++ G + + AP +A
Sbjct: 146 NCLVGENHLVKVADFGLSRLM-------TGDTYTAHAGAKFPIKWTAPESLA 190
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 79/188 (42%), Gaps = 40/188 (21%)
Query: 485 ANKIREGGFNIVY------NVAMKVANLKQK--EASRSFAAEFNALRNIRHRNLIKIITI 536
+I G F VY +VA+K+ N+ + ++F E LR RH N++
Sbjct: 13 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL---- 68
Query: 537 CSSIDFEGFDFKAISNGQLRLCN--------------LSLTQRVNIAIDVAFAIEYLRHH 582
F G+ K + C + + ++IA A ++YL H
Sbjct: 69 -----FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYL--H 121
Query: 583 CQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVA 642
+ SI+H DLK +NI L +D+ +GD GLA + E S G++ ++A
Sbjct: 122 AK-SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS------GSILWMA 174
Query: 643 PVIIAARN 650
P +I ++
Sbjct: 175 PEVIRMQD 182
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 79/188 (42%), Gaps = 40/188 (21%)
Query: 485 ANKIREGGFNIVY------NVAMKVANLKQK--EASRSFAAEFNALRNIRHRNLIKIITI 536
+I G F VY +VA+K+ N+ + ++F E LR RH N++
Sbjct: 41 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL---- 96
Query: 537 CSSIDFEGFDFKAISNGQLRLCN--------------LSLTQRVNIAIDVAFAIEYLRHH 582
F G+ K + C + + ++IA A ++YL H
Sbjct: 97 -----FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYL--H 149
Query: 583 CQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVA 642
+ SI+H DLK +NI L +D+ +GD GLA + E S G++ ++A
Sbjct: 150 AK-SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS------GSILWMA 202
Query: 643 PVIIAARN 650
P +I ++
Sbjct: 203 PEVIRMQD 210
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 82/198 (41%), Gaps = 37/198 (18%)
Query: 480 NNFSPANKIREGGFNIVY---------NVAMKVANLKQKEASRS-FAAEFNALRNIRHRN 529
+F P + GGF +V+ N A+K L +E +R E AL + H
Sbjct: 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPG 64
Query: 530 LIKIITIC----SSIDFEGFDFKAISNGQLRLCN-----------LSLTQR-----VNIA 569
+++ ++ + K Q++LC ++ +R ++I
Sbjct: 65 IVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIF 124
Query: 570 IDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETA- 628
+ +A A+E+L H + ++H DLKPSNI D V VGD GL + E T T
Sbjct: 125 LQIAEAVEFL--HSK-GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPM 181
Query: 629 ---SSSIGINGTVGYVAP 643
+ G GT Y++P
Sbjct: 182 PAYARHTGQVGTKLYMSP 199
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 497 YNVAMKVANLKQKEAS-RSFAAEFNALRNIRHRNLIKIITICSSID--FEGFDFKAISN- 552
Y++ + V LK+ F E ++ I+H NL++++ +C+ + +F N
Sbjct: 50 YSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 109
Query: 553 -GQLRLCNLSLTQRVN------IAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVT 605
LR CN Q VN +A ++ A+EYL + + +H DL N L+ ++ +
Sbjct: 110 LDYLRECN---RQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLV 163
Query: 606 HVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIA 647
V D GL++ + T +T ++ G + + AP +A
Sbjct: 164 KVADFGLSRLM-------TGDTYTAHAGAKFPIKWTAPESLA 198
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 497 YNVAMKVANLKQKEAS-RSFAAEFNALRNIRHRNLIKIITICSSID--FEGFDFKAISN- 552
Y++ + V LK+ F E ++ I+H NL++++ +C+ + +F N
Sbjct: 39 YSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 98
Query: 553 -GQLRLCNLSLTQRVN------IAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVT 605
LR CN Q VN +A ++ A+EYL + + +H DL N L+ ++ +
Sbjct: 99 LDYLRECN---RQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLV 152
Query: 606 HVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIA 647
V D GL++ + T +T ++ G + + AP +A
Sbjct: 153 KVADFGLSRLM-------TGDTYTAPAGAKFPIKWTAPESLA 187
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 80/172 (46%), Gaps = 25/172 (14%)
Query: 487 KIREGGFNIVYNVAMKVANLKQKEAS-RSFAAEFNALRNIRHRNLIKIITICSSID--FE 543
++ EG + Y++ + V LK+ F E ++ I+H NL++++ +C+ +
Sbjct: 32 EVYEGVWK-KYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 90
Query: 544 GFDFKAISN--GQLRLCNLSLTQRVN------IAIDVAFAIEYLRHHCQPSIVHGDLKPS 595
+F N LR CN Q VN +A ++ A+EYL + + +H DL
Sbjct: 91 ITEFMTYGNLLDYLRECN---RQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAAR 144
Query: 596 NILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIA 647
N L+ ++ + V D GL++ + T +T ++ G + + AP +A
Sbjct: 145 NCLVGENHLVKVADFGLSRLM-------TGDTYTAHAGAKFPIKWTAPESLA 189
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 75/159 (47%), Gaps = 18/159 (11%)
Query: 497 YNVAMKVANLKQKEAS-RSFAAEFNALRNIRHRNLIKIITICSSID--FEGFDFKAISN- 552
Y++ + V LK+ F E ++ I+H NL++++ +C+ + +F N
Sbjct: 35 YSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 94
Query: 553 -GQLRLCN---LSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVG 608
LR CN +S + +A ++ A+EYL + + +H DL N L+ ++ + V
Sbjct: 95 LDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVA 151
Query: 609 DLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIA 647
D GL++ + T +T ++ G + + AP +A
Sbjct: 152 DFGLSRLM-------TGDTXTAHAGAKFPIKWTAPESLA 183
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 497 YNVAMKVANLKQKEAS-RSFAAEFNALRNIRHRNLIKIITICSSID--FEGFDFKAISN- 552
Y++ + V LK+ F E ++ I+H NL++++ +C+ + +F N
Sbjct: 38 YSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 97
Query: 553 -GQLRLCNLSLTQRVN------IAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVT 605
LR CN Q VN +A ++ A+EYL + + +H DL N L+ ++ +
Sbjct: 98 LDYLRECN---RQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLV 151
Query: 606 HVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIA 647
V D GL++ + T +T ++ G + + AP +A
Sbjct: 152 KVADFGLSRLM-------TGDTYTAPAGAKFPIKWTAPESLA 186
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 497 YNVAMKVANLKQKEAS-RSFAAEFNALRNIRHRNLIKIITICSSID--FEGFDFKAISN- 552
Y++ + V LK+ F E ++ I+H NL++++ +C+ + +F N
Sbjct: 39 YSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 98
Query: 553 -GQLRLCNLSLTQRVN------IAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVT 605
LR CN Q VN +A ++ A+EYL + + +H DL N L+ ++ +
Sbjct: 99 LDYLRECN---RQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLV 152
Query: 606 HVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIA 647
V D GL++ + T +T ++ G + + AP +A
Sbjct: 153 KVADFGLSRLM-------TGDTYTAHAGAKFPIKWTAPESLA 187
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 82/181 (45%), Gaps = 29/181 (16%)
Query: 513 RSFAAEFNALRNIRHRNLIK----------IITICSSIDFEGFD-FKAISNGQLRLCNLS 561
R F +E + + H N+I+ ++ + ++ D F +++GQ +
Sbjct: 62 REFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQF-----T 116
Query: 562 LTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEP 621
+ Q V + +A + YL + S VH DL NIL++ ++V V D GL++FL E
Sbjct: 117 VIQLVGMLRGIASGMRYL---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFL---EE 170
Query: 622 GTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHT-------VMSFPQRFALNEKKQ 674
++ T +SS+G + + AP IA R + + VMSF +R + Q
Sbjct: 171 NSSDPTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQ 230
Query: 675 N 675
+
Sbjct: 231 D 231
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 497 YNVAMKVANLKQKEAS-RSFAAEFNALRNIRHRNLIKIITICSSID--FEGFDFKAISN- 552
Y++ + V LK+ F E ++ I+H NL++++ +C+ + +F N
Sbjct: 37 YSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 96
Query: 553 -GQLRLCNLSLTQRVN------IAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVT 605
LR CN Q VN +A ++ A+EYL + + +H DL N L+ ++ +
Sbjct: 97 LDYLRECN---RQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLV 150
Query: 606 HVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIA 647
V D GL++ + T +T ++ G + + AP +A
Sbjct: 151 KVADFGLSRLM-------TGDTYTAHAGAKFPIKWTAPESLA 185
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 82/181 (45%), Gaps = 29/181 (16%)
Query: 513 RSFAAEFNALRNIRHRNLIK----------IITICSSIDFEGFD-FKAISNGQLRLCNLS 561
R F +E + + H N+I+ ++ + ++ D F +++GQ +
Sbjct: 60 REFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQF-----T 114
Query: 562 LTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEP 621
+ Q V + +A + YL + S VH DL NIL++ ++V V D GL++FL E
Sbjct: 115 VIQLVGMLRGIASGMRYL---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFL---EE 168
Query: 622 GTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHT-------VMSFPQRFALNEKKQ 674
++ T +SS+G + + AP IA R + + VMSF +R + Q
Sbjct: 169 NSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQ 228
Query: 675 N 675
+
Sbjct: 229 D 229
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 80/172 (46%), Gaps = 25/172 (14%)
Query: 487 KIREGGFNIVYNVAMKVANLKQKEAS-RSFAAEFNALRNIRHRNLIKIITICSSID--FE 543
++ EG + Y++ + V LK+ F E ++ I+H NL++++ +C+ +
Sbjct: 28 EVYEGVWK-KYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYI 86
Query: 544 GFDFKAISN--GQLRLCNLSLTQRVN------IAIDVAFAIEYLRHHCQPSIVHGDLKPS 595
+F N LR CN Q VN +A ++ A+EYL + + +H DL
Sbjct: 87 ITEFMTYGNLLDYLRECN---RQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAAR 140
Query: 596 NILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIA 647
N L+ ++ + V D GL++ + T +T ++ G + + AP +A
Sbjct: 141 NCLVGENHLVKVADFGLSRLM-------TGDTYTAHAGAKFPIKWTAPESLA 185
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 497 YNVAMKVANLKQKEAS-RSFAAEFNALRNIRHRNLIKIITICSSID--FEGFDFKAISN- 552
Y++ + V LK+ F E ++ I+H NL++++ +C+ + +F N
Sbjct: 42 YSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 101
Query: 553 -GQLRLCNLSLTQRVN------IAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVT 605
LR CN Q VN +A ++ A+EYL + + +H DL N L+ ++ +
Sbjct: 102 LDYLRECN---RQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLV 155
Query: 606 HVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIA 647
V D GL++ + T +T ++ G + + AP +A
Sbjct: 156 KVADFGLSRLM-------TGDTYTAHAGAKFPIKWTAPESLA 190
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 75/159 (47%), Gaps = 18/159 (11%)
Query: 497 YNVAMKVANLKQKEAS-RSFAAEFNALRNIRHRNLIKIITICSSID--FEGFDFKAISN- 552
Y++ + V LK+ F E ++ I+H NL++++ +C+ + +F N
Sbjct: 37 YSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 96
Query: 553 -GQLRLCN---LSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVG 608
LR CN +S + +A ++ A+EYL + + +H DL N L+ ++ + V
Sbjct: 97 LDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVA 153
Query: 609 DLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIA 647
D GL++ + T +T ++ G + + AP +A
Sbjct: 154 DFGLSRLM-------TGDTYTAHAGAKFPIKWTAPESLA 185
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 71/168 (42%), Gaps = 23/168 (13%)
Query: 488 IREGGFNIVYNVAMKVANLKQKEASRS---FAAEFNALRNIRHRNLIKIITICSSIDFEG 544
++ G + Y+VA+K+ KE S S F E + + H L+K +CS
Sbjct: 24 VKLGKWKGQYDVAVKMI----KEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIY 79
Query: 545 FDFKAISNGQL------RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNIL 598
+ ISNG L L +Q + + DV + +L H +H DL N L
Sbjct: 80 IVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCL 136
Query: 599 LDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVII 646
+D+D+ V D G+ +++ + SS+G V + AP +
Sbjct: 137 VDRDLCVKVSDFGMTRYV-------LDDQYVSSVGTKFPVKWSAPEVF 177
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 75/159 (47%), Gaps = 18/159 (11%)
Query: 497 YNVAMKVANLKQKEAS-RSFAAEFNALRNIRHRNLIKIITICSSID--FEGFDFKAISN- 552
Y++ + V LK+ F E ++ I+H NL++++ +C+ + +F N
Sbjct: 37 YSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 96
Query: 553 -GQLRLCN---LSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVG 608
LR CN +S + +A ++ A+EYL + + +H DL N L+ ++ + V
Sbjct: 97 LDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVA 153
Query: 609 DLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIA 647
D GL++ + T +T ++ G + + AP +A
Sbjct: 154 DFGLSRLM-------TGDTYTAHAGAKFPIKWTAPESLA 185
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 80/181 (44%), Gaps = 26/181 (14%)
Query: 485 ANKIREGGFNIVY------NVAMKVANLKQK--EASRSFAAEFNALRNIRHRNLIKIITI 536
+I G F VY +VA+K+ N+ + ++F E LR RH N++ +
Sbjct: 13 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 72
Query: 537 CSSIDF-------EGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVH 589
++ EG + + + + ++IA A ++YL H + SI+H
Sbjct: 73 STAPQLAIVTQWCEGSSL--YHHLHIIETKFEMIKLIDIARQTAQGMDYL--HAK-SIIH 127
Query: 590 GDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAAR 649
DLK +NI L +D+ +GD GLA + E S G++ ++AP +I +
Sbjct: 128 RDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS------GSILWMAPEVIRMQ 181
Query: 650 N 650
+
Sbjct: 182 D 182
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 75/159 (47%), Gaps = 18/159 (11%)
Query: 497 YNVAMKVANLKQKEAS-RSFAAEFNALRNIRHRNLIKIITICSSID--FEGFDFKAISN- 552
Y++ + V LK+ F E ++ I+H NL++++ +C+ + +F N
Sbjct: 42 YSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 101
Query: 553 -GQLRLCN---LSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVG 608
LR CN +S + +A ++ A+EYL + + +H DL N L+ ++ + V
Sbjct: 102 LDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVA 158
Query: 609 DLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIA 647
D GL++ + T +T ++ G + + AP +A
Sbjct: 159 DFGLSRLM-------TGDTYTAHAGAKFPIKWTAPESLA 190
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 74/160 (46%), Gaps = 20/160 (12%)
Query: 497 YNVAMKVANLKQKEAS-RSFAAEFNALRNIRHRNLIKIITICS-----SIDFEGFDFKAI 550
Y++ + V LK+ F E ++ I+H NL++++ +C+ I E + +
Sbjct: 56 YSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNL 115
Query: 551 SNGQLRLCNLSLTQRV---NIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHV 607
+ LR CN V +A ++ A+EYL + + +H DL N L+ ++ V V
Sbjct: 116 LD-YLRECNREEVTAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHVVKV 171
Query: 608 GDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIA 647
D GL++ + T +T ++ G + + AP +A
Sbjct: 172 ADFGLSRLM-------TGDTYTAHAGAKFPIKWTAPESLA 204
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 497 YNVAMKVANLKQKEAS-RSFAAEFNALRNIRHRNLIKIITICSSID--FEGFDFKAISN- 552
Y++ + V LK+ F E ++ I+H NL++++ +C+ + +F N
Sbjct: 39 YSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 98
Query: 553 -GQLRLCNLSLTQRVN------IAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVT 605
LR CN Q VN +A ++ A+EYL + + +H DL N L+ ++ +
Sbjct: 99 LDYLRECN---RQEVNAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLV 152
Query: 606 HVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIA 647
V D GL++ + T +T ++ G + + AP +A
Sbjct: 153 KVADFGLSRLM-------TGDTYTAHAGAKFPIKWTAPESLA 187
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 80/191 (41%), Gaps = 40/191 (20%)
Query: 481 NFSPANKIREGGFNIV---------YNVAMKVAN---LKQKEASRSFAAEFNALRNIRHR 528
N+ + EG F V VA+K+ N L + + E + LR +RH
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 73
Query: 529 NLIKIITICSS-------IDFEG---FDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEY 578
++IK+ + S I++ G FD+ + +S + + A+EY
Sbjct: 74 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRD------KMSEQEARRFFQQIISAVEY 127
Query: 579 LRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTV 638
H IVH DLKP N+LLD+ + + D GL+ + G +T+ G+
Sbjct: 128 CHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIM---TDGNFLKTSC------GSP 175
Query: 639 GYVAPVIIAAR 649
Y AP +I+ +
Sbjct: 176 NYAAPEVISGK 186
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 80/191 (41%), Gaps = 40/191 (20%)
Query: 481 NFSPANKIREGGFNIV---------YNVAMKVAN---LKQKEASRSFAAEFNALRNIRHR 528
N+ + EG F V VA+K+ N L + + E + LR +RH
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 74
Query: 529 NLIKIITICSS-------IDFEG---FDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEY 578
++IK+ + S I++ G FD+ + +S + + A+EY
Sbjct: 75 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRD------KMSEQEARRFFQQIISAVEY 128
Query: 579 LRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTV 638
H IVH DLKP N+LLD+ + + D GL+ + G +T+ G+
Sbjct: 129 CHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIM---TDGNFLKTSC------GSP 176
Query: 639 GYVAPVIIAAR 649
Y AP +I+ +
Sbjct: 177 NYAAPEVISGK 187
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 79/188 (42%), Gaps = 40/188 (21%)
Query: 485 ANKIREGGFNIVY------NVAMKVANLKQK--EASRSFAAEFNALRNIRHRNLIKIITI 536
+I G F VY +VA+K+ N+ + ++F E LR RH N++
Sbjct: 33 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL---- 88
Query: 537 CSSIDFEGFDFKAISNGQLRLCN--------------LSLTQRVNIAIDVAFAIEYLRHH 582
F G+ K + C + + ++IA A ++YL H
Sbjct: 89 -----FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYL--H 141
Query: 583 CQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVA 642
+ SI+H DLK +NI L +D+ +GD GLA + E S G++ ++A
Sbjct: 142 AK-SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLS------GSILWMA 194
Query: 643 PVIIAARN 650
P +I ++
Sbjct: 195 PEVIRMQD 202
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 80/191 (41%), Gaps = 40/191 (20%)
Query: 481 NFSPANKIREGGFNIV---------YNVAMKVAN---LKQKEASRSFAAEFNALRNIRHR 528
N+ + EG F V VA+K+ N L + + E + LR +RH
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 64
Query: 529 NLIKIITICSS-------IDFEG---FDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEY 578
++IK+ + S I++ G FD+ + +S + + A+EY
Sbjct: 65 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRD------KMSEQEARRFFQQIISAVEY 118
Query: 579 LRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTV 638
H IVH DLKP N+LLD+ + + D GL+ + G +T+ G+
Sbjct: 119 CHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIM---TDGNFLKTSC------GSP 166
Query: 639 GYVAPVIIAAR 649
Y AP +I+ +
Sbjct: 167 NYAAPEVISGK 177
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 79/188 (42%), Gaps = 40/188 (21%)
Query: 485 ANKIREGGFNIVY------NVAMKVANLKQK--EASRSFAAEFNALRNIRHRNLIKIITI 536
+I G F VY +VA+K+ N+ + ++F E LR RH N++
Sbjct: 41 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL---- 96
Query: 537 CSSIDFEGFDFKAISNGQLRLCN--------------LSLTQRVNIAIDVAFAIEYLRHH 582
F G+ K + C + + ++IA A ++YL H
Sbjct: 97 -----FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYL--H 149
Query: 583 CQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVA 642
+ SI+H DLK +NI L +D+ +GD GLA + E S G++ ++A
Sbjct: 150 AK-SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLS------GSILWMA 202
Query: 643 PVIIAARN 650
P +I ++
Sbjct: 203 PEVIRMQD 210
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 75/159 (47%), Gaps = 18/159 (11%)
Query: 497 YNVAMKVANLKQKEAS-RSFAAEFNALRNIRHRNLIKIITICSSID--FEGFDFKAISN- 552
Y++ + V LK+ F E ++ I+H NL++++ +C+ + +F N
Sbjct: 35 YSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 94
Query: 553 -GQLRLCN---LSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVG 608
LR CN +S + +A ++ A+EYL + + +H DL N L+ ++ + V
Sbjct: 95 LDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVA 151
Query: 609 DLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIA 647
D GL++ + T +T ++ G + + AP +A
Sbjct: 152 DFGLSRLM-------TGDTFTAHAGAKFPIKWTAPESLA 183
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 79/188 (42%), Gaps = 40/188 (21%)
Query: 485 ANKIREGGFNIVY------NVAMKVANLKQK--EASRSFAAEFNALRNIRHRNLIKIITI 536
+I G F VY +VA+K+ N+ + ++F E LR RH N++
Sbjct: 13 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL---- 68
Query: 537 CSSIDFEGFDFKAISNGQLRLCN--------------LSLTQRVNIAIDVAFAIEYLRHH 582
F G+ K + C + + ++IA A ++YL H
Sbjct: 69 -----FMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYL--H 121
Query: 583 CQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVA 642
+ SI+H DLK +NI L +D+ +GD GLA + E S G++ ++A
Sbjct: 122 AK-SIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLS------GSILWMA 174
Query: 643 PVIIAARN 650
P +I ++
Sbjct: 175 PEVIRMQD 182
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 80/191 (41%), Gaps = 40/191 (20%)
Query: 481 NFSPANKIREGGFNIV---------YNVAMKVAN---LKQKEASRSFAAEFNALRNIRHR 528
N+ + EG F V VA+K+ N L + + E + LR +RH
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 68
Query: 529 NLIKIITICSS-------IDFEG---FDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEY 578
++IK+ + S I++ G FD+ + +S + + A+EY
Sbjct: 69 HIIKLYDVIKSKDEIIMVIEYAGNELFDYIVQRD------KMSEQEARRFFQQIISAVEY 122
Query: 579 LRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTV 638
H IVH DLKP N+LLD+ + + D GL+ + G +T+ G+
Sbjct: 123 CHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIM---TDGNFLKTSC------GSP 170
Query: 639 GYVAPVIIAAR 649
Y AP +I+ +
Sbjct: 171 NYAAPEVISGK 181
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 70/161 (43%), Gaps = 19/161 (11%)
Query: 508 QKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLRLCNLSL----- 562
+E R+F E +R + H N++K I + F + I G LR S+
Sbjct: 47 DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYP 106
Query: 563 -TQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEP 621
+QRV+ A D+A + YL +I+H DL N L+ ++ V D GLA+ + +
Sbjct: 107 WSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLM--VDE 161
Query: 622 GTTAETASS--------SIGINGTVGYVAPVIIAARNLENR 654
T E S + G ++AP +I R+ + +
Sbjct: 162 KTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEK 202
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 79/188 (42%), Gaps = 40/188 (21%)
Query: 485 ANKIREGGFNIVY------NVAMKVANLKQK--EASRSFAAEFNALRNIRHRNLIKIITI 536
+I G F VY +VA+K+ N+ + ++F E LR RH N++
Sbjct: 17 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL---- 72
Query: 537 CSSIDFEGFDFKAISNGQLRLCN--------------LSLTQRVNIAIDVAFAIEYLRHH 582
F G+ K + C + + ++IA A ++YL H
Sbjct: 73 -----FMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYL--H 125
Query: 583 CQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVA 642
+ SI+H DLK +NI L +D +GD GLA + E ++G++ ++A
Sbjct: 126 AK-SIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQ------LSGSILWMA 178
Query: 643 PVIIAARN 650
P +I ++
Sbjct: 179 PEVIRMQD 186
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 70/149 (46%), Gaps = 16/149 (10%)
Query: 506 LKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQL--RLCNLSLT 563
LK KE+S E LR I+H N++ + I S + + +S G+L R+
Sbjct: 60 LKGKESS--IENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFY 117
Query: 564 QRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL---DQDVVTHVGDLGLAKFLYGYE 620
+ + + ++ + + + IVH DLKP N+L D++ + D GL+K + G
Sbjct: 118 TEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSK-MEG-- 174
Query: 621 PGTTAETASSSIGINGTVGYVAPVIIAAR 649
G TA GT GYVAP ++A +
Sbjct: 175 KGDVMSTAC------GTPGYVAPEVLAQK 197
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 497 YNVAMKVANLKQKEAS-RSFAAEFNALRNIRHRNLIKIITICSSID--FEGFDFKAISN- 552
Y++ + V LK+ F E ++ I+H NL++++ +C+ + +F N
Sbjct: 241 YSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 300
Query: 553 -GQLRLCNLSLTQRVN------IAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVT 605
LR CN Q VN +A ++ A+EYL + + +H +L N L+ ++ +
Sbjct: 301 LDYLRECN---RQEVNAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLV 354
Query: 606 HVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIA 647
V D GL++ + T +T ++ G + + AP +A
Sbjct: 355 KVADFGLSRLM-------TGDTYTAHAGAKFPIKWTAPESLA 389
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 67/142 (47%), Gaps = 20/142 (14%)
Query: 486 NKIREGGFNIVYNVAMKVANLKQKEAS-RSFAAEFNALRNIRHRNLIKIITICSS----- 539
++ G +N VA+K LK S +F E ++ +RH L+++ + S
Sbjct: 32 GEVWMGTWNGTTRVAIK--TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYI 89
Query: 540 -IDFEG----FDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKP 594
I++ DF G+ L L Q V++A +A + Y+ + VH DL+
Sbjct: 90 VIEYMSKGSLLDFLKGEMGKY----LRLPQLVDMAAQIASGMAYVERM---NYVHRDLRA 142
Query: 595 SNILLDQDVVTHVGDLGLAKFL 616
+NIL+ +++V V D GLA+ +
Sbjct: 143 ANILVGENLVCKVADFGLARLI 164
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
Query: 497 YNVAMKVANLKQKEAS-RSFAAEFNALRNIRHRNLIKIITICSSID--FEGFDFKAISN- 552
Y++ + V LK+ F E ++ I+H NL++++ +C+ + +F N
Sbjct: 283 YSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 342
Query: 553 -GQLRLCNLSLTQRVN------IAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVT 605
LR CN Q VN +A ++ A+EYL + + +H +L N L+ ++ +
Sbjct: 343 LDYLRECN---RQEVNAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLV 396
Query: 606 HVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIA 647
V D GL++ + T +T ++ G + + AP +A
Sbjct: 397 KVADFGLSRLM-------TGDTYTAHAGAKFPIKWTAPESLA 431
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 65/155 (41%), Gaps = 23/155 (14%)
Query: 500 AMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD-----FKAISNGQ 554
MK+ N Q+E F +E +++ H N+I+++ +C + +G + G
Sbjct: 69 TMKLDNSSQREIE-EFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGD 127
Query: 555 LRLC-----------NLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDV 603
L ++ L + +D+A +EYL + + +H DL N +L D+
Sbjct: 128 LHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDM 184
Query: 604 VTHVGDLGLAKFLYG---YEPGTTAETASSSIGIN 635
V D GL+K +Y Y G A+ I I
Sbjct: 185 TVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAIE 219
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 67/142 (47%), Gaps = 20/142 (14%)
Query: 486 NKIREGGFNIVYNVAMKVANLKQKEAS-RSFAAEFNALRNIRHRNLIKIITICSS----- 539
++ G +N VA+K LK S +F E ++ +RH L+++ + S
Sbjct: 32 GEVWMGTWNGTTRVAIK--TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYI 89
Query: 540 -IDFEG----FDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKP 594
I++ DF G+ L L Q V++A +A + Y+ + VH DL+
Sbjct: 90 VIEYMSKGSLLDFLKGEMGKY----LRLPQLVDMAAQIASGMAYVERM---NYVHRDLRA 142
Query: 595 SNILLDQDVVTHVGDLGLAKFL 616
+NIL+ +++V V D GLA+ +
Sbjct: 143 ANILVGENLVCKVADFGLARLI 164
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 64/137 (46%), Gaps = 20/137 (14%)
Query: 491 GGFNIVYNVAMKVANLKQKEAS-RSFAAEFNALRNIRHRNLIKIITICSS--IDFEG--- 544
G +N VA+K LK S +F E ++ +RH L+++ + S I G
Sbjct: 203 GTWNGTTRVAIK--TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVGEYM 260
Query: 545 -----FDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL 599
DF G+ L L Q V++A +A + Y+ + VH DL+ +NIL+
Sbjct: 261 SKGSLLDFLKGETGKY----LRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILV 313
Query: 600 DQDVVTHVGDLGLAKFL 616
+++V V D GLA+ +
Sbjct: 314 GENLVCKVADFGLARLI 330
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 75/159 (47%), Gaps = 18/159 (11%)
Query: 497 YNVAMKVANLKQKEAS-RSFAAEFNALRNIRHRNLIKIITICSSID--FEGFDFKAISN- 552
Y++ + V LK+ F E ++ I+H NL++++ +C+ + +F N
Sbjct: 244 YSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNL 303
Query: 553 -GQLRLCN---LSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVG 608
LR CN +S + +A ++ A+EYL + + +H +L N L+ ++ + V
Sbjct: 304 LDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVA 360
Query: 609 DLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIA 647
D GL++ + T +T ++ G + + AP +A
Sbjct: 361 DFGLSRLM-------TGDTYTAHAGAKFPIKWTAPESLA 392
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 79/188 (42%), Gaps = 40/188 (21%)
Query: 485 ANKIREGGFNIVY------NVAMKVANLKQK--EASRSFAAEFNALRNIRHRNLIKIITI 536
+I G F VY +VA+K+ N+ + ++F E LR RH N++
Sbjct: 29 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILL---- 84
Query: 537 CSSIDFEGFDFKAISNGQLRLCN--------------LSLTQRVNIAIDVAFAIEYLRHH 582
F G+ K + C + + ++IA A ++YL H
Sbjct: 85 -----FMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYL--H 137
Query: 583 CQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVA 642
+ SI+H DLK +NI L +D +GD GLA + E ++G++ ++A
Sbjct: 138 AK-SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQ------LSGSILWMA 190
Query: 643 PVIIAARN 650
P +I ++
Sbjct: 191 PEVIRMQD 198
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 65/137 (47%), Gaps = 20/137 (14%)
Query: 491 GGFNIVYNVAMKVANLKQKEAS-RSFAAEFNALRNIRHRNLIKI--------ITICSSID 541
G +N VA+K LK S +F E ++ +RH L+++ I I +
Sbjct: 27 GTWNGTTRVAIK--TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIXIVTEYM 84
Query: 542 FEG--FDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL 599
+G DF G+ L L Q V++A +A + Y+ + VH DL+ +NIL+
Sbjct: 85 SKGSLLDFLKGETGKY----LRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILV 137
Query: 600 DQDVVTHVGDLGLAKFL 616
+++V V D GLA+ +
Sbjct: 138 GENLVCKVADFGLARLI 154
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 80/181 (44%), Gaps = 26/181 (14%)
Query: 485 ANKIREGGFNIVY------NVAMKVANL--KQKEASRSFAAEFNALRNIRHRNLIKIITI 536
+ +I G F VY +VA+K+ + E ++F E LR RH N++ +
Sbjct: 41 STRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGY 100
Query: 537 CSSIDF-------EGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVH 589
+ + EG + ++ + Q ++IA A ++YL H + +I+H
Sbjct: 101 MTKDNLAIVTQWCEGSSL--YKHLHVQETKFQMFQLIDIARQTAQGMDYL--HAK-NIIH 155
Query: 590 GDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAAR 649
D+K +NI L + + +GD GLA + E + G+V ++AP +I +
Sbjct: 156 RDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPT------GSVLWMAPEVIRMQ 209
Query: 650 N 650
+
Sbjct: 210 D 210
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 81/190 (42%), Gaps = 24/190 (12%)
Query: 473 AELSKATNNFSPANKIREGGFNIV---------YNVAMKVANLKQKEA--SRSFAAEFNA 521
A ++ T+++ ++ +G F++V A K+ N K+ A + E
Sbjct: 24 ATCTRFTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARI 83
Query: 522 LRNIRHRNLIKIITICSSIDFEGFDFKAISNGQL--RLCNLSLTQRVNIAIDVAFAIEYL 579
R ++H N++++ S F F ++ G+L + + + + +E +
Sbjct: 84 CRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESV 143
Query: 580 RHHCQPSIVHGDLKPSNILLD---QDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGING 636
H Q IVH DLKP N+LL + + D GLA + G + + G G
Sbjct: 144 NHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQ--------QAWFGFAG 195
Query: 637 TVGYVAPVII 646
T GY++P ++
Sbjct: 196 TPGYLSPEVL 205
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 64/137 (46%), Gaps = 20/137 (14%)
Query: 491 GGFNIVYNVAMKVANLKQKEAS-RSFAAEFNALRNIRHRNLIKIITICSSIDF------- 542
G +N VA+K LK S +F E ++ +RH L+++ + S
Sbjct: 286 GTWNGTTRVAIKT--LKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYM 343
Query: 543 -EG--FDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL 599
+G DF G+ L L Q V++A +A + Y+ + VH DL+ +NIL+
Sbjct: 344 SKGSLLDFLKGETGKY----LRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILV 396
Query: 600 DQDVVTHVGDLGLAKFL 616
+++V V D GLA+ +
Sbjct: 397 GENLVCKVADFGLARLI 413
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 65/137 (47%), Gaps = 20/137 (14%)
Query: 491 GGFNIVYNVAMKVANLKQKEAS-RSFAAEFNALRNIRHRNLIKI--------ITICSSID 541
G +N VA+K LK S +F E ++ +RH L+++ I I +
Sbjct: 30 GTWNGTTRVAIK--TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYM 87
Query: 542 FEG--FDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL 599
+G DF G+ L L Q V++A +A + Y+ + VH DL+ +NIL+
Sbjct: 88 SKGSLLDFLKGETGKY----LRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILV 140
Query: 600 DQDVVTHVGDLGLAKFL 616
+++V V D GLA+ +
Sbjct: 141 GENLVCKVADFGLARLI 157
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 20/137 (14%)
Query: 491 GGFNIVYNVAMKVANLKQKEAS-RSFAAEFNALRNIRHRNLIKI--------ITICSSID 541
G +N VA+K LK S +F E ++ IRH L+++ I I +
Sbjct: 37 GTWNGTTRVAIK--TLKPGTMSPEAFLQEAQVMKKIRHEKLVQLYAVVSEEPIYIVTEYM 94
Query: 542 FEG--FDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL 599
+G DF G+ L L Q V++A +A + Y+ + VH DL+ +NIL+
Sbjct: 95 SKGSLLDFLKGEMGKY----LRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILV 147
Query: 600 DQDVVTHVGDLGLAKFL 616
+++V V D GLA+ +
Sbjct: 148 GENLVCKVADFGLARLI 164
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 79/181 (43%), Gaps = 26/181 (14%)
Query: 485 ANKIREGGFNIVY------NVAMKVANLKQK--EASRSFAAEFNALRNIRHRNLIKIITI 536
+I G F VY +VA+K+ N+ + ++F E LR RH N++ +
Sbjct: 29 GQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY 88
Query: 537 CSSIDF-------EGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVH 589
++ EG + + + ++IA A ++YL H + SI+H
Sbjct: 89 STAPQLAIVTQWCEGSSL--YHHLHASETKFEMKKLIDIARQTARGMDYL--HAK-SIIH 143
Query: 590 GDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAAR 649
DLK +NI L +D +GD GLA + E ++G++ ++AP +I +
Sbjct: 144 RDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQ------LSGSILWMAPEVIRMQ 197
Query: 650 N 650
+
Sbjct: 198 D 198
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 65/137 (47%), Gaps = 20/137 (14%)
Query: 491 GGFNIVYNVAMKVANLKQKEAS-RSFAAEFNALRNIRHRNLIKI--------ITICSSID 541
G +N VA+K LK S +F E ++ +RH L+++ I I +
Sbjct: 203 GTWNGTTRVAIK--TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYM 260
Query: 542 FEG--FDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL 599
+G DF G+ L L Q V++A +A + Y+ + VH DL+ +NIL+
Sbjct: 261 SKGSLLDFLKGETGKY----LRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILV 313
Query: 600 DQDVVTHVGDLGLAKFL 616
+++V V D GLA+ +
Sbjct: 314 GENLVCKVADFGLARLI 330
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 65/137 (47%), Gaps = 20/137 (14%)
Query: 491 GGFNIVYNVAMKVANLKQKEAS-RSFAAEFNALRNIRHRNLIKI--------ITICSSID 541
G +N VA+K LK S +F E ++ +RH L+++ I I +
Sbjct: 203 GTWNGTTRVAIK--TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYM 260
Query: 542 FEG--FDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL 599
+G DF G+ L L Q V++A +A + Y+ + VH DL+ +NIL+
Sbjct: 261 SKGSLLDFLKGETGKY----LRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILV 313
Query: 600 DQDVVTHVGDLGLAKFL 616
+++V V D GLA+ +
Sbjct: 314 GENLVCKVADFGLARLI 330
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 10/106 (9%)
Query: 556 RLCNLSLTQR---VNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGL 612
R C+L + ++I I +A A+E+L H + ++H DLKPSNI D V VGD GL
Sbjct: 154 RRCSLEDREHGVCLHIFIQIAEAVEFL--HSK-GLMHRDLKPSNIFFTMDDVVKVGDFGL 210
Query: 613 AKFLYGYEPGTTAETA----SSSIGINGTVGYVAPVIIAARNLENR 654
+ E T T ++ G GT Y++P I N ++
Sbjct: 211 VTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHK 256
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 67/142 (47%), Gaps = 20/142 (14%)
Query: 486 NKIREGGFNIVYNVAMKVANLKQKEAS-RSFAAEFNALRNIRHRNLIKIITICSS----- 539
++ G +N VA+K LK S +F E ++ +RH L+++ + S
Sbjct: 32 GEVWMGTWNGTTRVAIK--TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYI 89
Query: 540 -IDFEG----FDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKP 594
+++ DF G+ L L Q V++A +A + Y+ + VH DL+
Sbjct: 90 VMEYMSKGCLLDFLKGEMGKY----LRLPQLVDMAAQIASGMAYVERM---NYVHRDLRA 142
Query: 595 SNILLDQDVVTHVGDLGLAKFL 616
+NIL+ +++V V D GLA+ +
Sbjct: 143 ANILVGENLVCKVADFGLARLI 164
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 73/163 (44%), Gaps = 18/163 (11%)
Query: 490 EGGFNIVYNVAMKVANLKQKEASRSFAAEFNALRNIR-HRNLIKIITICSSIDFEGFDFK 548
E I+ A +++ + +E + E + LR + H ++I +I S F F
Sbjct: 121 EFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFD 180
Query: 549 AISNGQL-----RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDV 603
+ G+L LS + +I + A+ +L + +IVH DLKP NILLD ++
Sbjct: 181 LMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNM 237
Query: 604 VTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVII 646
+ D G + L EPG + GT GY+AP I+
Sbjct: 238 QIRLSDFGFSCHL---EPGEKLRE------LCGTPGYLAPEIL 271
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 9/80 (11%)
Query: 571 DVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASS 630
++ A+EYL H + I+H DLKP NILL++D+ + D G AK L P + A+S
Sbjct: 137 EIVSALEYL--HGK-GIIHRDLKPENILLNEDMHIQITDFGTAKVL---SPESKQARANS 190
Query: 631 SIGINGTVGYVAPVIIAARN 650
+ GT YV+P ++ ++
Sbjct: 191 FV---GTAQYVSPELLTEKS 207
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 76/184 (41%), Gaps = 24/184 (13%)
Query: 479 TNNFSPANKIREGGFNIV---------YNVAMKVANLKQKEA--SRSFAAEFNALRNIRH 527
T+ + I +G F++V + A K+ N K+ A + E R ++H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 528 RNLIKIITICSSIDFEGFDFKAISNGQL--RLCNLSLTQRVNIAIDVAFAIEYLRHHCQP 585
N++++ S F F ++ G+L + + + + +E + H Q
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQM 122
Query: 586 SIVHGDLKPSNILLD---QDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVA 642
+VH DLKP N+LL + + D GLA + G + G GT GY++
Sbjct: 123 GVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQG--------DQQAWFGFAGTPGYLS 174
Query: 643 PVII 646
P ++
Sbjct: 175 PEVL 178
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 61/140 (43%), Gaps = 24/140 (17%)
Query: 499 VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSID-----FE---------- 543
VA+K A + F E L N++H +++K +C D FE
Sbjct: 48 VAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKF 107
Query: 544 ----GFDFKAISNGQLRLC--NLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNI 597
G D + +GQ R L L+Q ++IA +A + YL VH DL N
Sbjct: 108 LRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYL---ASQHFVHRDLATRNC 164
Query: 598 LLDQDVVTHVGDLGLAKFLY 617
L+ +++ +GD G+++ +Y
Sbjct: 165 LVGANLLVKIGDFGMSRDVY 184
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 79/180 (43%), Gaps = 32/180 (17%)
Query: 491 GGFNIVYN-------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITI---CSSI 540
G F V+ VA+K+ L+ K++ +S E + ++H NL++ I S++
Sbjct: 26 GRFGCVWKAQLMNDFVAVKIFPLQDKQSWQS-EREIFSTPGMKHENLLQFIAAEKRGSNL 84
Query: 541 DFE-----GFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHC--------QPSI 587
+ E F K L+ ++ + ++A ++ + YL +PSI
Sbjct: 85 EVELWLITAFHDKGSLTDYLKGNIITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSI 144
Query: 588 VHGDLKPSNILLDQDVVTHVGDLGLA-KFLYGYEPGTTAETASSSIGINGTVGYVAPVII 646
H D K N+LL D+ + D GLA +F G PG T G GT Y+AP ++
Sbjct: 145 AHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTH-------GQVGTRRYMAPEVL 197
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 65/137 (47%), Gaps = 20/137 (14%)
Query: 491 GGFNIVYNVAMKVANLKQKEAS-RSFAAEFNALRNIRHRNLIKI--------ITICSSID 541
G +N VA+K LK S +F E ++ +RH L+++ I I +
Sbjct: 26 GTWNGTTRVAIK--TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYM 83
Query: 542 FEG--FDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL 599
+G DF G+ L L Q V++A +A + Y+ + VH DL+ +NIL+
Sbjct: 84 SKGSLLDFLKGEMGKY----LRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILV 136
Query: 600 DQDVVTHVGDLGLAKFL 616
+++V V D GLA+ +
Sbjct: 137 GENLVCKVADFGLARLI 153
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 9/80 (11%)
Query: 571 DVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASS 630
++ A+EYL H + I+H DLKP NILL++D+ + D G AK L P + A+S
Sbjct: 140 EIVSALEYL--HGK-GIIHRDLKPENILLNEDMHIQITDFGTAKVL---SPESKQARANS 193
Query: 631 SIGINGTVGYVAPVIIAARN 650
+ GT YV+P ++ ++
Sbjct: 194 FV---GTAQYVSPELLTEKS 210
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 77/173 (44%), Gaps = 24/173 (13%)
Query: 491 GGFNIVYNVAMKVAN-------LKQKEASR--SFAAEFNALRNIRHRNLIKIITICSSID 541
G F+ V+ V ++ +K+ A R S E L+ I+H N++ + I S
Sbjct: 20 GAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTT 79
Query: 542 FEGFDFKAISNGQL--RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL 599
+ +S G+L R+ + + ++ + + +++ + IVH DLKP N+L
Sbjct: 80 HYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLY 139
Query: 600 ---DQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAAR 649
+++ + D GL+K E TA GT GYVAP ++A +
Sbjct: 140 LTPEENSKIMITDFGLSKM----EQNGIMSTAC------GTPGYVAPEVLAQK 182
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 65/137 (47%), Gaps = 20/137 (14%)
Query: 491 GGFNIVYNVAMKVANLKQKEAS-RSFAAEFNALRNIRHRNLIKI--------ITICSSID 541
G +N VA+K LK S +F E ++ +RH L+++ I I +
Sbjct: 28 GTWNGTTRVAIK--TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYM 85
Query: 542 FEG--FDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL 599
+G DF G+ L L Q V++A +A + Y+ + VH DL+ +NIL+
Sbjct: 86 SKGSLLDFLKGEMGKY----LRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILV 138
Query: 600 DQDVVTHVGDLGLAKFL 616
+++V V D GLA+ +
Sbjct: 139 GENLVCKVADFGLARLI 155
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 66/142 (46%), Gaps = 20/142 (14%)
Query: 486 NKIREGGFNIVYNVAMKVANLKQKEAS-RSFAAEFNALRNIRHRNLIKIITICSSIDF-- 542
++ G +N VA+K LK S +F E ++ +RH L+++ + S
Sbjct: 32 GEVWMGTWNGTTRVAIK--TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYI 89
Query: 543 ------EG--FDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKP 594
+G DF G+ L L Q V++A +A + Y+ + VH DL+
Sbjct: 90 VCEYMSKGSLLDFLKGEMGKY----LRLPQLVDMAAQIASGMAYVERM---NYVHRDLRA 142
Query: 595 SNILLDQDVVTHVGDLGLAKFL 616
+NIL+ +++V V D GLA+ +
Sbjct: 143 ANILVGENLVCKVADFGLARLI 164
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 46/80 (57%), Gaps = 9/80 (11%)
Query: 571 DVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASS 630
++ A+EYL H + I+H DLKP NILL++D+ + D G AK L P + A+S
Sbjct: 141 EIVSALEYL--HGK-GIIHRDLKPENILLNEDMHIQITDFGTAKVL---SPESKQARANS 194
Query: 631 SIGINGTVGYVAPVIIAARN 650
+ GT YV+P ++ ++
Sbjct: 195 FV---GTAQYVSPELLTEKS 211
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 67/142 (47%), Gaps = 20/142 (14%)
Query: 486 NKIREGGFNIVYNVAMKVANLKQKEAS-RSFAAEFNALRNIRHRNLIKI--------ITI 536
++ G +N VA+K LK S +F E ++ +RH L+++ I I
Sbjct: 32 GEVWMGTWNGTTRVAIK--TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYI 89
Query: 537 CSSIDFEG--FDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKP 594
+ +G DF G+ L L Q V++A +A + Y+ + VH DL+
Sbjct: 90 VTEYMSKGCLLDFLKGEMGKY----LRLPQLVDMAAQIASGMAYVERM---NYVHRDLRA 142
Query: 595 SNILLDQDVVTHVGDLGLAKFL 616
+NIL+ +++V V D GLA+ +
Sbjct: 143 ANILVGENLVCKVADFGLARLI 164
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 73/162 (45%), Gaps = 22/162 (13%)
Query: 497 YNVAMKVANLKQKEASRSFAA----EFNALRNIRHRNLIKIITICSSIDFEGFDFKAISN 552
+ VA+K+ N +QK S E L+ RH ++IK+ + S+ + +S
Sbjct: 37 HKVAVKILN-RQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSG 95
Query: 553 GQL--RLCNLSLTQRVN---IAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHV 607
G+L +C + + + + A++Y H +VH DLKP N+LLD + +
Sbjct: 96 GELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKI 152
Query: 608 GDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAAR 649
D GL+ + + E +S G+ Y AP +I+ R
Sbjct: 153 ADFGLSNMM------SDGEFLRTSC---GSPNYAAPEVISGR 185
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 67/154 (43%), Gaps = 18/154 (11%)
Query: 499 VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQL--- 555
V K A LK+KE + L+N++H L+ + + D F I+ G+L
Sbjct: 70 VLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYH 129
Query: 556 ---RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGL 612
C L R A ++A A+ YL +IV+ DLKP NILLD + D GL
Sbjct: 130 LQRERCFLEPRARF-YAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGL 185
Query: 613 AKFLYGYEPGTTAETASSSIGINGTVGYVAPVII 646
K E S++ GT Y+AP ++
Sbjct: 186 CK--------ENIEHNSTTSTFCGTPEYLAPEVL 211
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 65/137 (47%), Gaps = 20/137 (14%)
Query: 491 GGFNIVYNVAMKVANLKQKEAS-RSFAAEFNALRNIRHRNLIKI--------ITICSSID 541
G +N VA+K LK S +F E ++ +RH L+++ I I +
Sbjct: 37 GTWNGTTRVAIK--TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYM 94
Query: 542 FEG--FDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL 599
+G DF G+ L L Q V++A +A + Y+ + VH DL+ +NIL+
Sbjct: 95 SKGSLLDFLKGEMGKY----LRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILV 147
Query: 600 DQDVVTHVGDLGLAKFL 616
+++V V D GLA+ +
Sbjct: 148 GENLVCKVADFGLARLI 164
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 64/137 (46%), Gaps = 20/137 (14%)
Query: 491 GGFNIVYNVAMKVANLKQKEAS-RSFAAEFNALRNIRHRNLIKIITICSSIDF------- 542
G +N VA+K LK S +F E ++ +RH L+++ + S
Sbjct: 34 GTWNGTTRVAIK--TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYM 91
Query: 543 -EG--FDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL 599
+G DF G+ L L Q V+++ +A + Y+ + VH DL+ +NIL+
Sbjct: 92 NKGSLLDFLKGETGKY----LRLPQLVDMSAQIASGMAYVERM---NYVHRDLRAANILV 144
Query: 600 DQDVVTHVGDLGLAKFL 616
+++V V D GLA+ +
Sbjct: 145 GENLVCKVADFGLARLI 161
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 67/152 (44%), Gaps = 22/152 (14%)
Query: 480 NNFSPANKIREGGFNIVYN--------VAMKVANLKQKEASRSFAA--EFNALRNIRHRN 529
+ K+ EG + +VY VA+K L ++ A E + L+ + H N
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 530 LIKIITI-----CSSIDFEGF--DFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHH 582
++ +I + C ++ FE D K + + N + Q I I + + + H
Sbjct: 81 IVSLIDVIHSERCLTLVFEFMEKDLKKVLDE-----NKTGLQDSQIKIYLYQLLRGVAHC 135
Query: 583 CQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
Q I+H DLKP N+L++ D + D GLA+
Sbjct: 136 HQHRILHRDLKPQNLLINSDGALKLADFGLAR 167
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 64/137 (46%), Gaps = 20/137 (14%)
Query: 491 GGFNIVYNVAMKVANLKQKEAS-RSFAAEFNALRNIRHRNLIKIITICSSIDF------- 542
G +N VA+K LK S +F E ++ +RH L+++ + S
Sbjct: 34 GTWNGTTRVAIK--TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYM 91
Query: 543 -EG--FDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL 599
+G DF G+ L L Q V+++ +A + Y+ + VH DL+ +NIL+
Sbjct: 92 NKGSLLDFLKGETGKY----LRLPQLVDMSAQIASGMAYVERM---NYVHRDLRAANILV 144
Query: 600 DQDVVTHVGDLGLAKFL 616
+++V V D GLA+ +
Sbjct: 145 GENLVCKVADFGLARLI 161
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 67/152 (44%), Gaps = 22/152 (14%)
Query: 480 NNFSPANKIREGGFNIVYN--------VAMKVANLKQKEASRSFAA--EFNALRNIRHRN 529
+ K+ EG + +VY VA+K L ++ A E + L+ + H N
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 530 LIKIITI-----CSSIDFEGF--DFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHH 582
++ +I + C ++ FE D K + + N + Q I I + + + H
Sbjct: 81 IVSLIDVIHSERCLTLVFEFMEKDLKKVLDE-----NKTGLQDSQIKIYLYQLLRGVAHC 135
Query: 583 CQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
Q I+H DLKP N+L++ D + D GLA+
Sbjct: 136 HQHRILHRDLKPQNLLINSDGALKLADFGLAR 167
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 14/81 (17%)
Query: 569 AIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETA 628
A +V A+EYL H + I++ DLKP NILLD++ + D G AK++ P T
Sbjct: 112 AAEVCLALEYL--HSK-DIIYRDLKPENILLDKNGHIKITDFGFAKYV----PDVTYX-- 162
Query: 629 SSSIGINGTVGYVAPVIIAAR 649
+ GT Y+AP +++ +
Sbjct: 163 -----LCGTPDYIAPEVVSTK 178
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 72/162 (44%), Gaps = 22/162 (13%)
Query: 497 YNVAMKVANLKQKEASRSFAA----EFNALRNIRHRNLIKIITICSSIDFEGFDFKAISN 552
+ VA+K+ N +QK S E L+ RH ++IK+ + S+ + +S
Sbjct: 37 HKVAVKILN-RQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSG 95
Query: 553 GQL--RLCNLSLTQRVN---IAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHV 607
G+L +C + + + + A++Y H +VH DLKP N+LLD + +
Sbjct: 96 GELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHM---VVHRDLKPENVLLDAHMNAKI 152
Query: 608 GDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAAR 649
D GL+ + + E S G+ Y AP +I+ R
Sbjct: 153 ADFGLSNMM------SDGEFLRDSC---GSPNYAAPEVISGR 185
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 76/173 (43%), Gaps = 23/173 (13%)
Query: 487 KIREGGFNIV-YNVAMKVANLKQKEASRSFAA----EFNALRNIRHRNLIKIITICSSID 541
K++ G + + VA+K+ N +QK S E L+ RH ++IK+ + S+
Sbjct: 31 KVKVGKHELTGHKVAVKILN-RQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPS 89
Query: 542 FEGFDFKAISNGQL--RLCN---LSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSN 596
+ +S G+L +C L + + + ++Y H +VH DLKP N
Sbjct: 90 DIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHM---VVHRDLKPEN 146
Query: 597 ILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAAR 649
+LLD + + D GL+ + + E S G+ Y AP +I+ R
Sbjct: 147 VLLDAHMNAKIADFGLSNMM------SDGEFLRXSC---GSPNYAAPEVISGR 190
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 571 DVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASS 630
++ A+EYL H + I+H DLKP NILL++D+ + D G AK L P + A+
Sbjct: 116 EIVSALEYL--HGK-GIIHRDLKPENILLNEDMHIQITDFGTAKVL---SPESKQARANX 169
Query: 631 SIGINGTVGYVAPVIIAARN 650
+ GT YV+P ++ ++
Sbjct: 170 FV---GTAQYVSPELLTEKS 186
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 9/80 (11%)
Query: 571 DVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASS 630
++ A+EYL H + I+H DLKP NILL++D+ + D G AK L P + A++
Sbjct: 138 EIVSALEYL--HGK-GIIHRDLKPENILLNEDMHIQITDFGTAKVL---SPESKQARANA 191
Query: 631 SIGINGTVGYVAPVIIAARN 650
+ GT YV+P ++ ++
Sbjct: 192 FV---GTAQYVSPELLTEKS 208
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 571 DVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASS 630
++ A+EYL H + I+H DLKP NILL++D+ + D G AK L P + A+
Sbjct: 115 EIVSALEYL--HGK-GIIHRDLKPENILLNEDMHIQITDFGTAKVL---SPESKQARANX 168
Query: 631 SIGINGTVGYVAPVIIAARN 650
+ GT YV+P ++ ++
Sbjct: 169 FV---GTAQYVSPELLTEKS 185
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 571 DVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASS 630
++ A+EYL H + I+H DLKP NILL++D+ + D G AK L P + A+
Sbjct: 117 EIVSALEYL--HGK-GIIHRDLKPENILLNEDMHIQITDFGTAKVL---SPESKQARANX 170
Query: 631 SIGINGTVGYVAPVIIAARN 650
+ GT YV+P ++ ++
Sbjct: 171 FV---GTAQYVSPELLTEKS 187
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 571 DVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASS 630
++ A+EYL H + I+H DLKP NILL++D+ + D G AK L P + A+
Sbjct: 118 EIVSALEYL--HGK-GIIHRDLKPENILLNEDMHIQITDFGTAKVL---SPESKQARANX 171
Query: 631 SIGINGTVGYVAPVIIAARN 650
+ GT YV+P ++ ++
Sbjct: 172 FV---GTAQYVSPELLTEKS 188
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 66/142 (46%), Gaps = 20/142 (14%)
Query: 486 NKIREGGFNIVYNVAMKVANLKQKEAS-RSFAAEFNALRNIRHRNLIKI--------ITI 536
++ G +N VA+K LK S +F E ++ +RH L+++ I I
Sbjct: 32 GEVWMGTWNGTTRVAIK--TLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYI 89
Query: 537 CSSIDFEG--FDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKP 594
+ +G DF G+ L L Q V++A +A + Y+ + VH DL
Sbjct: 90 VTEYMSKGSLLDFLKGEMGKY----LRLPQLVDMAAQIASGMAYVERM---NYVHRDLAA 142
Query: 595 SNILLDQDVVTHVGDLGLAKFL 616
+NIL+ +++V V D GLA+ +
Sbjct: 143 ANILVGENLVCKVADFGLARLI 164
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 571 DVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASS 630
++ A+EYL H + I+H DLKP NILL++D+ + D G AK L P + A+
Sbjct: 137 EIVSALEYL--HGK-GIIHRDLKPENILLNEDMHIQITDFGTAKVL---SPESKQARANX 190
Query: 631 SIGINGTVGYVAPVIIAARN 650
+ GT YV+P ++ ++
Sbjct: 191 FV---GTAQYVSPELLTEKS 207
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 42/79 (53%), Gaps = 12/79 (15%)
Query: 571 DVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASS 630
++ A++YL++ I+H D+KP NILLD+ H+ D +A L P T T +
Sbjct: 123 ELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAML----PRETQITTMA 175
Query: 631 SIGINGTVGYVAPVIIAAR 649
GT Y+AP + ++R
Sbjct: 176 -----GTKPYMAPEMFSSR 189
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 571 DVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASS 630
++ A+EYL H + I+H DLKP NILL++D+ + D G AK L P + A+
Sbjct: 122 EIVSALEYL--HGK-GIIHRDLKPENILLNEDMHIQITDFGTAKVL---SPESKQARANX 175
Query: 631 SIGINGTVGYVAPVIIAARN 650
+ GT YV+P ++ ++
Sbjct: 176 FV---GTAQYVSPELLTEKS 192
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 74/169 (43%), Gaps = 25/169 (14%)
Query: 488 IREGGFNIVYNVAMKVANLKQKEASRS---FAAEFNALRNIRHRNLIKIITICSSIDFEG 544
++ G + Y+VA+K+ KE S S F E + N+ H L+++ +C+
Sbjct: 40 VKYGKWRGQYDVAIKMI----KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIF 95
Query: 545 FDFKAISNG-------QLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNI 597
+ ++NG ++R Q + + DV A+EYL +H DL N
Sbjct: 96 IITEYMANGCLLNYLREMRH-RFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNC 151
Query: 598 LLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVII 646
L++ V V D GL++++ + +SS+G V + P ++
Sbjct: 152 LVNDQGVVKVSDFGLSRYV-------LDDEETSSVGSKFPVRWSPPEVL 193
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 571 DVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASS 630
++ A+EYL H + I+H DLKP NILL++D+ + D G AK L P + A+
Sbjct: 138 EIVSALEYL--HGK-GIIHRDLKPENILLNEDMHIQITDFGTAKVL---SPESKQARANX 191
Query: 631 SIGINGTVGYVAPVIIAARN 650
+ GT YV+P ++ ++
Sbjct: 192 FV---GTAQYVSPELLTEKS 208
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 64/147 (43%), Gaps = 28/147 (19%)
Query: 490 EGGFNIVYN---------VAMKVANLKQKEAS-----RSFAAEFNALRNIRHRNLIKIIT 535
EG F VY VA+K L + + R+ E L+ + H N+I ++
Sbjct: 20 EGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLD 79
Query: 536 -------ICSSIDFEGFDFKAI-SNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSI 587
I DF D + I + L L + + + + +EYL H I
Sbjct: 80 AFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQ---GLEYLHQHW---I 133
Query: 588 VHGDLKPSNILLDQDVVTHVGDLGLAK 614
+H DLKP+N+LLD++ V + D GLAK
Sbjct: 134 LHRDLKPNNLLLDENGVLKLADFGLAK 160
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 571 DVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASS 630
++ A+EYL H + I+H DLKP NILL++D+ + D G AK L P + A+
Sbjct: 138 EIVSALEYL--HGK-GIIHRDLKPENILLNEDMHIQITDFGTAKVL---SPESKQARANX 191
Query: 631 SIGINGTVGYVAPVIIAARN 650
+ GT YV+P ++ ++
Sbjct: 192 FV---GTAQYVSPELLTEKS 208
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 571 DVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASS 630
++ A+EYL H + I+H DLKP NILL++D+ + D G AK L P + A+
Sbjct: 138 EIVSALEYL--HGK-GIIHRDLKPENILLNEDMHIQITDFGTAKVL---SPESKQARANX 191
Query: 631 SIGINGTVGYVAPVIIAARN 650
+ GT YV+P ++ ++
Sbjct: 192 FV---GTAQYVSPELLTEKS 208
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 571 DVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASS 630
++ A+EYL H + I+H DLKP NILL++D+ + D G AK L P + A+
Sbjct: 140 EIVSALEYL--HGK-GIIHRDLKPENILLNEDMHIQITDFGTAKVL---SPESKQARANX 193
Query: 631 SIGINGTVGYVAPVIIAARN 650
+ GT YV+P ++ ++
Sbjct: 194 FV---GTAQYVSPELLTEKS 210
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 571 DVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASS 630
++ A+EYL H + I+H DLKP NILL++D+ + D G AK L P + A+
Sbjct: 140 EIVSALEYL--HGK-GIIHRDLKPENILLNEDMHIQITDFGTAKVL---SPESKQARANX 193
Query: 631 SIGINGTVGYVAPVIIAARN 650
+ GT YV+P ++ ++
Sbjct: 194 FV---GTAQYVSPELLTEKS 210
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 571 DVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASS 630
++ A+EYL H + I+H DLKP NILL++D+ + D G AK L P + A+
Sbjct: 140 EIVSALEYL--HGK-GIIHRDLKPENILLNEDMHIQITDFGTAKVL---SPESKQARANX 193
Query: 631 SIGINGTVGYVAPVIIAARN 650
+ GT YV+P ++ ++
Sbjct: 194 FV---GTAQYVSPELLTEKS 210
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 9/80 (11%)
Query: 571 DVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASS 630
++ A+EYL I+H DLKP NILL++D+ + D G AK L P + A+
Sbjct: 145 EIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVL---SPESKQARANX 198
Query: 631 SIGINGTVGYVAPVIIAARN 650
+ GT YV+P ++ ++
Sbjct: 199 FV---GTAQYVSPELLTEKS 215
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 571 DVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASS 630
++ A+EYL H + I+H DLKP NILL++D+ + D G AK L P + A+
Sbjct: 141 EIVSALEYL--HGK-GIIHRDLKPENILLNEDMHIQITDFGTAKVL---SPESKQARANX 194
Query: 631 SIGINGTVGYVAPVIIAARN 650
+ GT YV+P ++ ++
Sbjct: 195 FV---GTAQYVSPELLTEKS 211
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 74/169 (43%), Gaps = 25/169 (14%)
Query: 488 IREGGFNIVYNVAMKVANLKQKEASRS---FAAEFNALRNIRHRNLIKIITICSSIDFEG 544
++ G + Y+VA+K+ KE S S F E + N+ H L+++ +C+
Sbjct: 40 VKYGKWRGQYDVAIKMI----KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIF 95
Query: 545 FDFKAISNG-------QLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNI 597
+ ++NG ++R Q + + DV A+EYL +H DL N
Sbjct: 96 IITEYMANGCLLNYLREMRH-RFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNC 151
Query: 598 LLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVII 646
L++ V V D GL++++ + +SS+G V + P ++
Sbjct: 152 LVNDQGVVKVSDFGLSRYV-------LDDEYTSSVGSKFPVRWSPPEVL 193
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 66/141 (46%), Gaps = 20/141 (14%)
Query: 487 KIREGGFNIVYNVAMKVANLKQKEAS-RSFAAEFNALRNIRHRNLIKI--------ITIC 537
++ G +N VA+K LK S +F E ++ +RH L+++ I I
Sbjct: 200 EVWMGTWNGTTRVAIKT--LKPGNMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIV 257
Query: 538 SSIDFEG--FDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPS 595
+ +G DF G+ L L Q V++A +A + Y+ + VH DL+ +
Sbjct: 258 TEYMSKGSLLDFLKGEMGKY----LRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAA 310
Query: 596 NILLDQDVVTHVGDLGLAKFL 616
NIL+ +++V V D GL + +
Sbjct: 311 NILVGENLVCKVADFGLGRLI 331
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 59/137 (43%), Gaps = 21/137 (15%)
Query: 499 VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLRL- 557
VA+K A + F E L N++H +++K +C D F+ + +G L
Sbjct: 46 VAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKF 105
Query: 558 -----------------CNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLD 600
L+ +Q ++IA +A + YL VH DL N L+
Sbjct: 106 LRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVG 162
Query: 601 QDVVTHVGDLGLAKFLY 617
++++ +GD G+++ +Y
Sbjct: 163 ENLLVKIGDFGMSRDVY 179
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 79/180 (43%), Gaps = 29/180 (16%)
Query: 482 FSPANKIREGGFNIVYNVAMKVANLK------------QKEASRSFAAEFNALRNIRHRN 529
+ +K+ GG + VY + N+K ++E + F E + + H+N
Sbjct: 13 YKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQN 72
Query: 530 LIKIITI-----CSSIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQ 584
++ +I + C + E + +S LS+ +N + ++ ++H
Sbjct: 73 IVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQI---LDGIKHAHD 129
Query: 585 PSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETA-SSSIGINGTVGYVAP 643
IVH D+KP NIL+D + + D G+AK L +ET+ + + + GTV Y +P
Sbjct: 130 MRIVHRDIKPQNILIDSNKTLKIFDFGIAKAL--------SETSLTQTNHVLGTVQYFSP 181
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 571 DVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASS 630
++ A+EYL H + I+H DLKP NILL++D+ + D G AK L P + A+
Sbjct: 143 EIVSALEYL--HGK-GIIHRDLKPENILLNEDMHIQITDFGTAKVL---SPESKQARANX 196
Query: 631 SIGINGTVGYVAPVIIAARN 650
+ GT YV+P ++ ++
Sbjct: 197 FV---GTAQYVSPELLTEKS 213
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 571 DVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASS 630
++ A+EYL H + I+H DLKP NILL++D+ + D G AK L P + A+
Sbjct: 140 EIVSALEYL--HGK-GIIHRDLKPENILLNEDMHIQITDFGTAKVL---SPESKQARANX 193
Query: 631 SIGINGTVGYVAPVIIAARN 650
+ GT YV+P ++ ++
Sbjct: 194 FV---GTAQYVSPELLTEKS 210
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 60/142 (42%), Gaps = 11/142 (7%)
Query: 499 VAMKVANLKQKEASRS-FAAEFNALRNIRHRNLIKIITICSSIDFEGFDF--KAISNGQL 555
VA+K RS + E + LR + H ++IK C + + G L
Sbjct: 63 VAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSL 122
Query: 556 R----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLG 611
R ++ L Q + A + + YL H Q +H DL N+LLD D + +GD G
Sbjct: 123 RDYLPRHSIGLAQLLLFAQQICEGMAYL--HAQ-HYIHRDLAARNVLLDNDRLVKIGDFG 179
Query: 612 LAKFL-YGYEPGTTAETASSSI 632
LAK + G+E E S +
Sbjct: 180 LAKAVPEGHEXYRVREDGDSPV 201
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 571 DVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASS 630
++ A+EYL H + I+H DLKP NILL++D+ + D G AK L P + A+
Sbjct: 140 EIVSALEYL--HGK-GIIHRDLKPENILLNEDMHIQITDFGTAKVL---SPESKQARANX 193
Query: 631 SIGINGTVGYVAPVIIAARN 650
+ GT YV+P ++ ++
Sbjct: 194 FV---GTAQYVSPELLTEKS 210
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 74/169 (43%), Gaps = 25/169 (14%)
Query: 488 IREGGFNIVYNVAMKVANLKQKEASRS---FAAEFNALRNIRHRNLIKIITICSSIDFEG 544
++ G + Y+VA+K+ KE S S F E + N+ H L+++ +C+
Sbjct: 25 VKYGKWRGQYDVAIKMI----KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIF 80
Query: 545 FDFKAISNG-------QLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNI 597
+ ++NG ++R Q + + DV A+EYL +H DL N
Sbjct: 81 IITEYMANGCLLNYLREMRH-RFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNC 136
Query: 598 LLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVII 646
L++ V V D GL++++ + +SS+G V + P ++
Sbjct: 137 LVNDQGVVKVSDFGLSRYV-------LDDEYTSSVGSKFPVRWSPPEVL 178
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 74/169 (43%), Gaps = 25/169 (14%)
Query: 488 IREGGFNIVYNVAMKVANLKQKEASRS---FAAEFNALRNIRHRNLIKIITICSSIDFEG 544
++ G + Y+VA+K+ KE S S F E + N+ H L+++ +C+
Sbjct: 24 VKYGKWRGQYDVAIKMI----KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIF 79
Query: 545 FDFKAISNG-------QLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNI 597
+ ++NG ++R Q + + DV A+EYL +H DL N
Sbjct: 80 IITEYMANGCLLNYLREMRH-RFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNC 135
Query: 598 LLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVII 646
L++ V V D GL++++ + +SS+G V + P ++
Sbjct: 136 LVNDQGVVKVSDFGLSRYV-------LDDEYTSSVGSKFPVRWSPPEVL 177
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 8/68 (11%)
Query: 579 LRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTV 638
L H Q +I++ DLKP N+LLD D + DLGLA L + G T + G GT
Sbjct: 302 LEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL---KAGQT-----KTKGYAGTP 353
Query: 639 GYVAPVII 646
G++AP ++
Sbjct: 354 GFMAPELL 361
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 74/157 (47%), Gaps = 25/157 (15%)
Query: 507 KQKEASRSFAAEFNALRNIRHRNLIKII-------TICSSIDF-EGFD-FKAISNGQLRL 557
K++E SR E L N++H N+++ ++ +D+ EG D FK I+ + L
Sbjct: 65 KEREESRR---EVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVL 121
Query: 558 CNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617
Q ++ + + A L+H I+H D+K NI L +D +GD G+A+ L
Sbjct: 122 --FQEDQILDWFVQICLA---LKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVL- 175
Query: 618 GYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENR 654
+T E A + I GT Y++P I + N+
Sbjct: 176 ----NSTVELARACI---GTPYYLSPEICENKPYNNK 205
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 8/68 (11%)
Query: 579 LRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTV 638
L H Q +I++ DLKP N+LLD D + DLGLA L + G T + G GT
Sbjct: 302 LEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL---KAGQT-----KTKGYAGTP 353
Query: 639 GYVAPVII 646
G++AP ++
Sbjct: 354 GFMAPELL 361
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 8/68 (11%)
Query: 579 LRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTV 638
L H Q +I++ DLKP N+LLD D + DLGLA L + G T + G GT
Sbjct: 302 LEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL---KAGQT-----KTKGYAGTP 353
Query: 639 GYVAPVII 646
G++AP ++
Sbjct: 354 GFMAPELL 361
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 74/169 (43%), Gaps = 25/169 (14%)
Query: 488 IREGGFNIVYNVAMKVANLKQKEASRS---FAAEFNALRNIRHRNLIKIITICSSIDFEG 544
++ G + Y+VA+K+ KE S S F E + N+ H L+++ +C+
Sbjct: 20 VKYGKWRGQYDVAIKMI----KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIF 75
Query: 545 FDFKAISNG-------QLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNI 597
+ ++NG ++R Q + + DV A+EYL +H DL N
Sbjct: 76 IITEYMANGCLLNYLREMRH-RFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNC 131
Query: 598 LLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVII 646
L++ V V D GL++++ + +SS+G V + P ++
Sbjct: 132 LVNDQGVVKVSDFGLSRYV-------LDDEYTSSVGSKFPVRWSPPEVL 173
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 38/68 (55%), Gaps = 8/68 (11%)
Query: 579 LRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTV 638
L H Q +I++ DLKP N+LLD D + DLGLA L + G T + G GT
Sbjct: 302 LEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVEL---KAGQT-----KTKGYAGTP 353
Query: 639 GYVAPVII 646
G++AP ++
Sbjct: 354 GFMAPELL 361
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 83/196 (42%), Gaps = 38/196 (19%)
Query: 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFA-AEFNALRNIRH 527
+++ F K+ G + VY VA+K L +E + S A E + ++ ++H
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 528 RNLIKIITICSS-------IDFEGFDFKAISNGQL-----RLCNLSLTQRVNIAIDVAFA 575
N++++ + + +F D K + + R L+L + + A
Sbjct: 63 ENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLA 122
Query: 576 IEYLRHHCQP-SIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGI 634
C I+H DLKP N+L+++ +GD GLA+ G T SS +
Sbjct: 123 F------CHENKILHRDLKPQNLLINKRGQLKLGDFGLARAF-----GIPVNTFSSEV-- 169
Query: 635 NGTVGYVAP-VIIAAR 649
T+ Y AP V++ +R
Sbjct: 170 -VTLWYRAPDVLMGSR 184
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 75/172 (43%), Gaps = 35/172 (20%)
Query: 492 GFNIVYNVAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDF--------- 542
I+ + + ++ + + + E L+ + H +IKI + D+
Sbjct: 45 AIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEG 104
Query: 543 -EGFDFKAISNGQLR--LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL 599
E FD K + N +L+ C L Q + A++YL + I+H DLKP N+LL
Sbjct: 105 GELFD-KVVGNKRLKEATCKLYFYQML-------LAVQYLHEN---GIIHRDLKPENVLL 153
Query: 600 ---DQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAA 648
++D + + D G +K L G T+ + + GT Y+AP ++ +
Sbjct: 154 SSQEEDCLIKITDFGHSKIL-----GETSLMRT----LCGTPTYLAPEVLVS 196
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 74/169 (43%), Gaps = 25/169 (14%)
Query: 488 IREGGFNIVYNVAMKVANLKQKEASRS---FAAEFNALRNIRHRNLIKIITICSSIDFEG 544
++ G + Y+VA+K+ KE S S F E + N+ H L+++ +C+
Sbjct: 31 VKYGKWRGQYDVAIKMI----KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIF 86
Query: 545 FDFKAISNG-------QLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNI 597
+ ++NG ++R Q + + DV A+EYL +H DL N
Sbjct: 87 IITEYMANGCLLNYLREMRH-RFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNC 142
Query: 598 LLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVII 646
L++ V V D GL++++ + +SS+G V + P ++
Sbjct: 143 LVNDQGVVKVSDFGLSRYV-------LDDEYTSSVGSKFPVRWSPPEVL 184
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 81/179 (45%), Gaps = 31/179 (17%)
Query: 491 GGFNIVYN-------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITI---CSSI 540
G F V+ VA+K+ ++ K++ ++ E +L ++H N+++ I +S+
Sbjct: 35 GRFGCVWKAQLLNEYVAVKIFPIQDKQSWQN-EYEVYSLPGMKHENILQFIGAEKRGTSV 93
Query: 541 DFE-----GFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHC-------QPSIV 588
D + F K + L+ +S + +IA +A + YL +P+I
Sbjct: 94 DVDLWLITAFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAIS 153
Query: 589 HGDLKPSNILLDQDVVTHVGDLGLA-KFLYGYEPGTTAETASSSIGINGTVGYVAPVII 646
H D+K N+LL ++ + D GLA KF G G T G GT Y+AP ++
Sbjct: 154 HRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTH-------GQVGTRRYMAPEVL 205
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 75/172 (43%), Gaps = 35/172 (20%)
Query: 492 GFNIVYNVAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDF--------- 542
I+ + + ++ + + + E L+ + H +IKI + D+
Sbjct: 39 AIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEG 98
Query: 543 -EGFDFKAISNGQLR--LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL 599
E FD K + N +L+ C L Q + A++YL + I+H DLKP N+LL
Sbjct: 99 GELFD-KVVGNKRLKEATCKLYFYQML-------LAVQYLHEN---GIIHRDLKPENVLL 147
Query: 600 ---DQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAA 648
++D + + D G +K L G T+ + + GT Y+AP ++ +
Sbjct: 148 SSQEEDCLIKITDFGHSKIL-----GETSLMRT----LCGTPTYLAPEVLVS 190
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 75/172 (43%), Gaps = 35/172 (20%)
Query: 492 GFNIVYNVAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDF--------- 542
I+ + + ++ + + + E L+ + H +IKI + D+
Sbjct: 38 AIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEG 97
Query: 543 -EGFDFKAISNGQLR--LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL 599
E FD K + N +L+ C L Q + A++YL + I+H DLKP N+LL
Sbjct: 98 GELFD-KVVGNKRLKEATCKLYFYQML-------LAVQYLHEN---GIIHRDLKPENVLL 146
Query: 600 ---DQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAA 648
++D + + D G +K L G T+ + + GT Y+AP ++ +
Sbjct: 147 SSQEEDCLIKITDFGHSKIL-----GETSLMRT----LCGTPTYLAPEVLVS 189
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 75/172 (43%), Gaps = 35/172 (20%)
Query: 492 GFNIVYNVAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDF--------- 542
I+ + + ++ + + + E L+ + H +IKI + D+
Sbjct: 178 AIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEG 237
Query: 543 -EGFDFKAISNGQLR--LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL 599
E FD K + N +L+ C L Q + A++YL + I+H DLKP N+LL
Sbjct: 238 GELFD-KVVGNKRLKEATCKLYFYQ-------MLLAVQYLHEN---GIIHRDLKPENVLL 286
Query: 600 ---DQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAA 648
++D + + D G +K L G T+ + + GT Y+AP ++ +
Sbjct: 287 SSQEEDCLIKITDFGHSKIL-----GETSLMRT----LCGTPTYLAPEVLVS 329
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 75/172 (43%), Gaps = 35/172 (20%)
Query: 492 GFNIVYNVAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDF--------- 542
I+ + + ++ + + + E L+ + H +IKI + D+
Sbjct: 164 AIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEG 223
Query: 543 -EGFDFKAISNGQLR--LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL 599
E FD K + N +L+ C L Q + A++YL + I+H DLKP N+LL
Sbjct: 224 GELFD-KVVGNKRLKEATCKLYFYQ-------MLLAVQYLHEN---GIIHRDLKPENVLL 272
Query: 600 ---DQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAA 648
++D + + D G +K L G T+ + + GT Y+AP ++ +
Sbjct: 273 SSQEEDCLIKITDFGHSKIL-----GETSLMRT----LCGTPTYLAPEVLVS 315
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 75/172 (43%), Gaps = 35/172 (20%)
Query: 492 GFNIVYNVAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDF--------- 542
I+ + + ++ + + + E L+ + H +IKI + D+
Sbjct: 39 AIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEG 98
Query: 543 -EGFDFKAISNGQLR--LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL 599
E FD K + N +L+ C L Q + A++YL + I+H DLKP N+LL
Sbjct: 99 GELFD-KVVGNKRLKEATCKLYFYQML-------LAVQYLHEN---GIIHRDLKPENVLL 147
Query: 600 ---DQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAA 648
++D + + D G +K L G T+ + + GT Y+AP ++ +
Sbjct: 148 SSQEEDCLIKITDFGHSKIL-----GETSLMRT----LCGTPTYLAPEVLVS 190
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 79/183 (43%), Gaps = 22/183 (12%)
Query: 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLK-QKEASRSFA-AEFNALRNIR 526
+ NF KI EG + +VY VA+K L + E S A E + L+ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 527 HRNLIKIITICSSIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLR--HHCQ 584
H N++K++ + + + F+ + + + S + + + ++ + L+ C
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 585 P-SIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAP 643
++H DLKP N+L++ + + D GLA+ G T + T+ Y AP
Sbjct: 124 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-----GVPVRTYXHEV---VTLWYRAP 175
Query: 644 VII 646
I+
Sbjct: 176 EIL 178
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 80/183 (43%), Gaps = 22/183 (12%)
Query: 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLK-QKEASRSFA-AEFNALRNIR 526
+ NF KI EG + +VY VA+K L + E S A E + L+ +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 527 HRNLIKIITICSSIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLR--HHCQ 584
H N++K++ + + + F+ +S + + S + + + ++ + L+ C
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 585 P-SIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAP 643
++H DLKP N+L++ + + D GLA+ G T + T+ Y AP
Sbjct: 122 SHRVLHRDLKPENLLINTEGAIKLADFGLARAF-----GVPVRTYXHEV---VTLWYRAP 173
Query: 644 VII 646
I+
Sbjct: 174 EIL 176
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 80/183 (43%), Gaps = 22/183 (12%)
Query: 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLK-QKEASRSFA-AEFNALRNIR 526
+ NF KI EG + +VY VA+K L + E S A E + L+ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 527 HRNLIKIITICSSIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLR--HHCQ 584
H N++K++ + + + F+ +S + + S + + + ++ + L+ C
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 585 P-SIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAP 643
++H DLKP N+L++ + + D GLA+ G T + T+ Y AP
Sbjct: 124 SHRVLHRDLKPENLLINTEGAIKLADFGLARAF-----GVPVRTYXHEV---VTLWYRAP 175
Query: 644 VII 646
I+
Sbjct: 176 EIL 178
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 74/176 (42%), Gaps = 23/176 (13%)
Query: 491 GGFNIVYNVAMKVAN--LKQKEAS---RSFAAEFNALRNIRHRNLIKII-----TICSSI 540
G F +V + + +KQ E+ ++F E L + H N++K+ +C +
Sbjct: 19 GAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACLNPVCLVM 78
Query: 541 DF-EGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQP-SIVHGDLKPSNIL 598
++ EG + +G L + ++ + + + YL H QP +++H DLKP N+L
Sbjct: 79 EYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYL-HSMQPKALIHRDLKPPNLL 137
Query: 599 LDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENR 654
L V L + F GT + + G+ ++AP + N +
Sbjct: 138 L----VAGGTVLKICDF------GTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEK 183
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 73/179 (40%), Gaps = 40/179 (22%)
Query: 490 EGGFNIV-----YNVAMKVAN-------LKQKEASRSFAAEFNALRNIRHRNLIKIITIC 537
EG F V Y KVA LK+ + E + L+ +RH ++IK+ +
Sbjct: 19 EGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVI 78
Query: 538 SS-------IDFEG---FDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSI 587
++ I++ G FD+ Q++ AIEY H I
Sbjct: 79 TTPTDIVMVIEYAGGELFDYIVEKKRMTEDEGRRFFQQI------ICAIEYCHRH---KI 129
Query: 588 VHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVII 646
VH DLKP N+LLD ++ + D GL+ + G +T+ G+ Y AP +I
Sbjct: 130 VHRDLKPENLLLDDNLNVKIADFGLSNIMTD---GNFLKTSC------GSPNYAAPEVI 179
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 58/138 (42%), Gaps = 16/138 (11%)
Query: 514 SFAAEFNALRNIRHRNLIKIITICSSIDFEGFDF--KAISNGQLRLC------NLSLTQR 565
E LRN+ H N++K IC+ G + + +G L+ ++L Q+
Sbjct: 69 DLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQ 128
Query: 566 VNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTA 625
+ A+ + ++YL VH DL N+L++ + +GD GL K + T
Sbjct: 129 LKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAI-----ETDK 180
Query: 626 ETASSSIGINGTVGYVAP 643
E + + V + AP
Sbjct: 181 EXXTVKDDRDSPVFWYAP 198
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 75/172 (43%), Gaps = 35/172 (20%)
Query: 492 GFNIVYNVAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDF--------- 542
I+ + + ++ + + + E L+ + H +IKI + D+
Sbjct: 39 AIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEG 98
Query: 543 -EGFDFKAISNGQLR--LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL 599
E FD K + N +L+ C L Q + A++YL + I+H DLKP N+LL
Sbjct: 99 GELFD-KVVGNKRLKEATCKLYFYQML-------LAVQYLHEN---GIIHRDLKPENVLL 147
Query: 600 ---DQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAA 648
++D + + D G +K L G T+ + + GT Y+AP ++ +
Sbjct: 148 SSQEEDCLIKITDFGHSKIL-----GETSLMRT----LCGTPTYLAPEVLVS 190
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 62/139 (44%), Gaps = 23/139 (16%)
Query: 499 VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSS-----IDFE---------- 543
VA+K + A + F E L ++H+++++ +C+ + FE
Sbjct: 74 VAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRF 133
Query: 544 ----GFDFKAISNGQ-LRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNIL 598
G D K ++ G+ + L L Q + +A VA + YL VH DL N L
Sbjct: 134 LRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCL 190
Query: 599 LDQDVVTHVGDLGLAKFLY 617
+ Q +V +GD G+++ +Y
Sbjct: 191 VGQGLVVKIGDFGMSRDIY 209
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 58/138 (42%), Gaps = 16/138 (11%)
Query: 514 SFAAEFNALRNIRHRNLIKIITICSSIDFEGFDF--KAISNGQLRLC------NLSLTQR 565
E LRN+ H N++K IC+ G + + +G L+ ++L Q+
Sbjct: 57 DLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQ 116
Query: 566 VNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTA 625
+ A+ + ++YL VH DL N+L++ + +GD GL K + T
Sbjct: 117 LKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAI-----ETDK 168
Query: 626 ETASSSIGINGTVGYVAP 643
E + + V + AP
Sbjct: 169 EXXTVKDDRDSPVFWYAP 186
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 75/179 (41%), Gaps = 23/179 (12%)
Query: 488 IREGGFNIVYNVAMKVAN--LKQKEAS---RSFAAEFNALRNIRHRNLIKII-----TIC 537
+ G F +V + + +KQ E+ ++F E L + H N++K+ +C
Sbjct: 17 VGRGAFGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACLNPVC 76
Query: 538 SSIDF-EGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQP-SIVHGDLKPS 595
+++ EG + +G L + ++ + + + YL H QP +++H DLKP
Sbjct: 77 LVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYL-HSMQPKALIHRDLKPP 135
Query: 596 NILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENR 654
N+LL V L + F GT + + G+ ++AP + N +
Sbjct: 136 NLLL----VAGGTVLKICDF------GTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEK 184
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 79/181 (43%), Gaps = 22/181 (12%)
Query: 480 NNFSPANKIREGGFNIVYN---------VAMKVANLK-QKEASRSFA-AEFNALRNIRHR 528
NF KI EG + +VY VA+K L + E S A E + L+ + H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 529 NLIKIITICSSIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLR--HHCQP- 585
N++K++ + + + F+ + + + S + + + ++ + L+ C
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 129
Query: 586 SIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVI 645
++H DLKP N+L++ + + D GLA+ G T + + T+ Y AP I
Sbjct: 130 RVLHRDLKPQNLLINTEGAIKLADFGLARAF-----GVPVRTYTHEV---VTLWYRAPEI 181
Query: 646 I 646
+
Sbjct: 182 L 182
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 79/181 (43%), Gaps = 22/181 (12%)
Query: 480 NNFSPANKIREGGFNIVYN---------VAMKVANLK-QKEASRSFA-AEFNALRNIRHR 528
NF KI EG + +VY VA+K L + E S A E + L+ + H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 529 NLIKIITICSSIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLR--HHCQP- 585
N++K++ + + + F+ + + + S + + + ++ + L+ C
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 129
Query: 586 SIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVI 645
++H DLKP N+L++ + + D GLA+ G T + + T+ Y AP I
Sbjct: 130 RVLHRDLKPQNLLINTEGAIKLADFGLARAF-----GVPVRTYTHEV---VTLWYRAPEI 181
Query: 646 I 646
+
Sbjct: 182 L 182
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 80/183 (43%), Gaps = 22/183 (12%)
Query: 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLK-QKEASRSFA-AEFNALRNIR 526
+ NF KI EG + +VY VA+K L + E S A E + L+ +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 527 HRNLIKIITICSSIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLR--HHCQ 584
H N++K++ + + + F+ + + + S + + + ++ + L+ C
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 585 P-SIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAP 643
++H DLKP N+L++ + + D GLA+ G T + + T+ Y AP
Sbjct: 122 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-----GVPVRTYTHEV---VTLWYRAP 173
Query: 644 VII 646
I+
Sbjct: 174 EIL 176
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 79/181 (43%), Gaps = 22/181 (12%)
Query: 480 NNFSPANKIREGGFNIVYN---------VAMKVANLK-QKEASRSFA-AEFNALRNIRHR 528
NF KI EG + +VY VA+K L + E S A E + L+ + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 529 NLIKIITICSSIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLR--HHCQP- 585
N++K++ + + + F+ + + + S + + + ++ + L+ C
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSH 122
Query: 586 SIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVI 645
++H DLKP N+L++ + + D GLA+ G T + + T+ Y AP I
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAF-----GVPVRTYTHEV---VTLWYRAPEI 174
Query: 646 I 646
+
Sbjct: 175 L 175
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 79/181 (43%), Gaps = 22/181 (12%)
Query: 480 NNFSPANKIREGGFNIVYN---------VAMKVANLK-QKEASRSFA-AEFNALRNIRHR 528
NF KI EG + +VY VA+K L + E S A E + L+ + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 529 NLIKIITICSSIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLR--HHCQP- 585
N++K++ + + + F+ + + + S + + + ++ + L+ C
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 586 SIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVI 645
++H DLKP N+L++ + + D GLA+ G T + + T+ Y AP I
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAF-----GVPVRTYTHEV---VTLWYRAPEI 174
Query: 646 I 646
+
Sbjct: 175 L 175
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 79/181 (43%), Gaps = 22/181 (12%)
Query: 480 NNFSPANKIREGGFNIVYN---------VAMKVANLK-QKEASRSFA-AEFNALRNIRHR 528
NF KI EG + +VY VA+K L + E S A E + L+ + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 529 NLIKIITICSSIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLR--HHCQP- 585
N++K++ + + + F+ + + + S + + + ++ + L+ C
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 586 SIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVI 645
++H DLKP N+L++ + + D GLA+ G T + + T+ Y AP I
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAF-----GVPVRTYTHEV---VTLWYRAPEI 174
Query: 646 I 646
+
Sbjct: 175 L 175
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 79/181 (43%), Gaps = 22/181 (12%)
Query: 480 NNFSPANKIREGGFNIVYN---------VAMKVANLK-QKEASRSFA-AEFNALRNIRHR 528
NF KI EG + +VY VA+K L + E S A E + L+ + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 529 NLIKIITICSSIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLR--HHCQP- 585
N++K++ + + + F+ + + + S + + + ++ + L+ C
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 586 SIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVI 645
++H DLKP N+L++ + + D GLA+ G T + + T+ Y AP I
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAF-----GVPVRTYTHEV---VTLWYRAPEI 173
Query: 646 I 646
+
Sbjct: 174 L 174
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 79/181 (43%), Gaps = 22/181 (12%)
Query: 480 NNFSPANKIREGGFNIVYN---------VAMKVANLK-QKEASRSFA-AEFNALRNIRHR 528
NF KI EG + +VY VA+K L + E S A E + L+ + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 529 NLIKIITICSSIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLR--HHCQP- 585
N++K++ + + + F+ + + + S + + + ++ + L+ C
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 586 SIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVI 645
++H DLKP N+L++ + + D GLA+ G T + + T+ Y AP I
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAF-----GVPVRTYTHEV---VTLWYRAPEI 174
Query: 646 I 646
+
Sbjct: 175 L 175
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 79/181 (43%), Gaps = 22/181 (12%)
Query: 480 NNFSPANKIREGGFNIVYN---------VAMKVANLK-QKEASRSFA-AEFNALRNIRHR 528
NF KI EG + +VY VA+K L + E S A E + L+ + H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 529 NLIKIITICSSIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLR--HHCQP- 585
N++K++ + + + F+ + + + S + + + ++ + L+ C
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 126
Query: 586 SIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVI 645
++H DLKP N+L++ + + D GLA+ G T + + T+ Y AP I
Sbjct: 127 RVLHRDLKPQNLLINTEGAIKLADFGLARAF-----GVPVRTYTHEV---VTLWYRAPEI 178
Query: 646 I 646
+
Sbjct: 179 L 179
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 79/181 (43%), Gaps = 22/181 (12%)
Query: 480 NNFSPANKIREGGFNIVYN---------VAMKVANLK-QKEASRSFA-AEFNALRNIRHR 528
NF KI EG + +VY VA+K L + E S A E + L+ + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 529 NLIKIITICSSIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLR--HHCQP- 585
N++K++ + + + F+ + + + S + + + ++ + L+ C
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 586 SIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVI 645
++H DLKP N+L++ + + D GLA+ G T + + T+ Y AP I
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAF-----GVPVRTYTHEV---VTLWYRAPEI 173
Query: 646 I 646
+
Sbjct: 174 L 174
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 67/149 (44%), Gaps = 12/149 (8%)
Query: 509 KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLRLC------NLSL 562
++ R F +E + + H N+I + + + + + NG L ++
Sbjct: 75 EKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTV 134
Query: 563 TQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPG 622
Q V + +A ++YL + VH DL NIL++ ++V V D GL++FL E
Sbjct: 135 IQLVGMLRGIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFL---EDD 188
Query: 623 TTAETASSSIGINGTVGYVAPVIIAARNL 651
T+ T +S++G + + AP I R
Sbjct: 189 TSDPTYTSALGGKIPIRWTAPEAIQYRKF 217
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 56/136 (41%), Gaps = 16/136 (11%)
Query: 518 EFNALRNIRHRNLIKIITICSS-----IDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDV 572
E L+ +RH NL+ ++ +C + FE D + + +L L +
Sbjct: 74 EIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQI 133
Query: 573 AFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSI 632
I + H +I+H D+KP NIL+ Q V + D G A+ L PG + +
Sbjct: 134 INGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAA--PGEVYDDEVA-- 186
Query: 633 GINGTVGYVAPVIIAA 648
T Y AP ++
Sbjct: 187 ----TRWYRAPELLVG 198
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 53/127 (41%), Gaps = 13/127 (10%)
Query: 499 VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDF--KAISNGQLR 556
VA+K +E R F E L++++H N++K +C S + + G LR
Sbjct: 60 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 119
Query: 557 LCNLSLTQRVNIAIDVAFAIEYLRHHCQ-------PSIVHGDLKPSNILLDQDVVTHVGD 609
Q+ ID ++Y C+ +H DL NIL++ + +GD
Sbjct: 120 ----DYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGD 175
Query: 610 LGLAKFL 616
GL K L
Sbjct: 176 FGLTKVL 182
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 53/127 (41%), Gaps = 13/127 (10%)
Query: 499 VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDF--KAISNGQLR 556
VA+K +E R F E L++++H N++K +C S + + G LR
Sbjct: 60 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 119
Query: 557 LCNLSLTQRVNIAIDVAFAIEYLRHHCQ-------PSIVHGDLKPSNILLDQDVVTHVGD 609
Q+ ID ++Y C+ +H DL NIL++ + +GD
Sbjct: 120 ----DYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGD 175
Query: 610 LGLAKFL 616
GL K L
Sbjct: 176 FGLTKVL 182
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 80/186 (43%), Gaps = 28/186 (15%)
Query: 479 TNNFSPANKIREGGFNIV---------YNVAMKVANLKQKEAS--RSFAAEFNALRNIRH 527
T+ + ++ +G F++V A K+ N K+ A + E R ++H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 528 RNLIKIITICSSIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRH---HCQ 584
N++++ S F F ++ G+L ++ + + A D + I+ + HC
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGEL-FEDIVAREYYSEA-DASHCIQQILESVNHCH 120
Query: 585 -PSIVHGDLKPSNILL---DQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGY 640
IVH DLKP N+LL + + D GLA + G + + G GT GY
Sbjct: 121 LNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQ--------QAWFGFAGTPGY 172
Query: 641 VAPVII 646
++P ++
Sbjct: 173 LSPEVL 178
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 79/193 (40%), Gaps = 42/193 (21%)
Query: 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLK-QKEASRSFAA-EFNALRNIR 526
+ NF KI EG + +VY VA+K L + E S A E + L+ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 527 HRNLIKIITICS------------SIDFEGF-DFKAISNGQLRLCNLSLTQRVNIAIDVA 573
H N++K++ + S+D + F D A++ L L L Q +
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQ------ 117
Query: 574 FAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIG 633
+ + H ++H DLKP N+L++ + + D GLA+ G T +
Sbjct: 118 -GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-----GVPVRTYXHEV- 167
Query: 634 INGTVGYVAPVII 646
T+ Y AP I+
Sbjct: 168 --VTLWYRAPEIL 178
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 53/127 (41%), Gaps = 13/127 (10%)
Query: 499 VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDF--KAISNGQLR 556
VA+K +E R F E L++++H N++K +C S + + G LR
Sbjct: 42 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 101
Query: 557 LCNLSLTQRVNIAIDVAFAIEYLRHHCQ-------PSIVHGDLKPSNILLDQDVVTHVGD 609
Q+ ID ++Y C+ +H DL NIL++ + +GD
Sbjct: 102 ----DYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGD 157
Query: 610 LGLAKFL 616
GL K L
Sbjct: 158 FGLTKVL 164
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 79/183 (43%), Gaps = 22/183 (12%)
Query: 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLK-QKEASRSFA-AEFNALRNIR 526
+ NF KI EG + +VY VA+K L + E S A E + L+ +
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 527 HRNLIKIITICSSIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLR--HHCQ 584
H N++K++ + + + F+ + + + S + + + ++ + L+ C
Sbjct: 65 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 124
Query: 585 P-SIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAP 643
++H DLKP N+L++ + + D GLA+ G T + T+ Y AP
Sbjct: 125 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-----GVPVRTYXHEV---VTLWYRAP 176
Query: 644 VII 646
I+
Sbjct: 177 EIL 179
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 79/183 (43%), Gaps = 22/183 (12%)
Query: 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLK-QKEASRSFA-AEFNALRNIR 526
+ NF KI EG + +VY VA+K L + E S A E + L+ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 527 HRNLIKIITICSSIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLR--HHCQ 584
H N++K++ + + + F+ + + + S + + + ++ + L+ C
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 585 P-SIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAP 643
++H DLKP N+L++ + + D GLA+ G T + T+ Y AP
Sbjct: 124 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-----GVPVRTYXHEV---VTLWYRAP 175
Query: 644 VII 646
I+
Sbjct: 176 EIL 178
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 79/193 (40%), Gaps = 42/193 (21%)
Query: 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLK-QKEASRSFAA-EFNALRNIR 526
+ NF KI EG + +VY VA+K L + E S A E + L+ +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 527 HRNLIKIITICS------------SIDFEGF-DFKAISNGQLRLCNLSLTQRVNIAIDVA 573
H N++K++ + S+D + F D A++ L L L Q +
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQ------ 116
Query: 574 FAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIG 633
+ + H ++H DLKP N+L++ + + D GLA+ G T +
Sbjct: 117 -GLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAF-----GVPVRTYXHEV- 166
Query: 634 INGTVGYVAPVII 646
T+ Y AP I+
Sbjct: 167 --VTLWYRAPEIL 177
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 53/127 (41%), Gaps = 13/127 (10%)
Query: 499 VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDF--KAISNGQLR 556
VA+K +E R F E L++++H N++K +C S + + G LR
Sbjct: 45 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 104
Query: 557 LCNLSLTQRVNIAIDVAFAIEYLRHHCQ-------PSIVHGDLKPSNILLDQDVVTHVGD 609
Q+ ID ++Y C+ +H DL NIL++ + +GD
Sbjct: 105 ----DYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGD 160
Query: 610 LGLAKFL 616
GL K L
Sbjct: 161 FGLTKVL 167
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 53/127 (41%), Gaps = 13/127 (10%)
Query: 499 VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDF--KAISNGQLR 556
VA+K +E R F E L++++H N++K +C S + + G LR
Sbjct: 42 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 101
Query: 557 LCNLSLTQRVNIAIDVAFAIEYLRHHCQ-------PSIVHGDLKPSNILLDQDVVTHVGD 609
Q+ ID ++Y C+ +H DL NIL++ + +GD
Sbjct: 102 ----DYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGD 157
Query: 610 LGLAKFL 616
GL K L
Sbjct: 158 FGLTKVL 164
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 79/186 (42%), Gaps = 28/186 (15%)
Query: 479 TNNFSPANKIREGGFNIV---------YNVAMKVANLKQKEAS--RSFAAEFNALRNIRH 527
T+ + ++ +G F++V A K+ N K+ A + E R ++H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 528 RNLIKIITICSSIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRH---HCQ 584
N++++ S F F ++ G+L ++ + + A D + I+ + HC
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGEL-FEDIVAREYYSEA-DASHCIQQILESVNHCH 120
Query: 585 -PSIVHGDLKPSNILL---DQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGY 640
IVH DLKP N+LL + + D GLA + G + G GT GY
Sbjct: 121 LNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQG--------DQQAWFGFAGTPGY 172
Query: 641 VAPVII 646
++P ++
Sbjct: 173 LSPEVL 178
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 79/183 (43%), Gaps = 22/183 (12%)
Query: 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLK-QKEASRSFA-AEFNALRNIR 526
+ NF KI EG + +VY VA+K L + E S A E + L+ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 527 HRNLIKIITICSSIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLR--HHCQ 584
H N++K++ + + + F+ + + + S + + + ++ + L+ C
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 585 P-SIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAP 643
++H DLKP N+L++ + + D GLA+ G T + T+ Y AP
Sbjct: 124 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-----GVPVRTYXHEV---VTLWYRAP 175
Query: 644 VII 646
I+
Sbjct: 176 EIL 178
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 79/183 (43%), Gaps = 22/183 (12%)
Query: 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLK-QKEASRSFA-AEFNALRNIR 526
+ NF KI EG + +VY VA+K L + E S A E + L+ +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 527 HRNLIKIITICSSIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLR--HHCQ 584
H N++K++ + + + F+ + + + S + + + ++ + L+ C
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 122
Query: 585 P-SIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAP 643
++H DLKP N+L++ + + D GLA+ G T + T+ Y AP
Sbjct: 123 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-----GVPVRTYXHEV---VTLWYRAP 174
Query: 644 VII 646
I+
Sbjct: 175 EIL 177
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 62/139 (44%), Gaps = 23/139 (16%)
Query: 499 VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSS-----IDFE---------- 543
VA+K + A + F E L ++H+++++ +C+ + FE
Sbjct: 45 VAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRF 104
Query: 544 ----GFDFKAISNGQ-LRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNIL 598
G D K ++ G+ + L L Q + +A VA + YL VH DL N L
Sbjct: 105 LRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCL 161
Query: 599 LDQDVVTHVGDLGLAKFLY 617
+ Q +V +GD G+++ +Y
Sbjct: 162 VGQGLVVKIGDFGMSRDIY 180
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 53/127 (41%), Gaps = 13/127 (10%)
Query: 499 VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDF--KAISNGQLR 556
VA+K +E R F E L++++H N++K +C S + + G LR
Sbjct: 42 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 101
Query: 557 LCNLSLTQRVNIAIDVAFAIEYLRHHCQ-------PSIVHGDLKPSNILLDQDVVTHVGD 609
Q+ ID ++Y C+ +H DL NIL++ + +GD
Sbjct: 102 ----DYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGD 157
Query: 610 LGLAKFL 616
GL K L
Sbjct: 158 FGLTKVL 164
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 53/127 (41%), Gaps = 13/127 (10%)
Query: 499 VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDF--KAISNGQLR 556
VA+K +E R F E L++++H N++K +C S + + G LR
Sbjct: 41 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 100
Query: 557 LCNLSLTQRVNIAIDVAFAIEYLRHHCQ-------PSIVHGDLKPSNILLDQDVVTHVGD 609
Q+ ID ++Y C+ +H DL NIL++ + +GD
Sbjct: 101 ----DYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGD 156
Query: 610 LGLAKFL 616
GL K L
Sbjct: 157 FGLTKVL 163
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 53/127 (41%), Gaps = 13/127 (10%)
Query: 499 VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD--FKAISNGQLR 556
VA+K +E R F E L++++H N++K +C S + + G LR
Sbjct: 73 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 132
Query: 557 LCNLSLTQRVNIAIDVAFAIEYLRHHCQ-------PSIVHGDLKPSNILLDQDVVTHVGD 609
Q+ ID ++Y C+ +H DL NIL++ + +GD
Sbjct: 133 ----DYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGD 188
Query: 610 LGLAKFL 616
GL K L
Sbjct: 189 FGLTKVL 195
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 79/183 (43%), Gaps = 22/183 (12%)
Query: 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLK-QKEASRSFA-AEFNALRNIR 526
+ NF KI EG + +VY VA+K L + E S A E + L+ +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 527 HRNLIKIITICSSIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLR--HHCQ 584
H N++K++ + + + F+ + + + S + + + ++ + L+ C
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 122
Query: 585 P-SIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAP 643
++H DLKP N+L++ + + D GLA+ G T + T+ Y AP
Sbjct: 123 SHRVLHRDLKPENLLINTEGAIKLADFGLARAF-----GVPVRTYXHEV---VTLWYRAP 174
Query: 644 VII 646
I+
Sbjct: 175 EIL 177
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 582 HCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYV 641
H +P+I H DL N+L+ D + D GL+ L G E +++I GT+ Y+
Sbjct: 136 HYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYM 195
Query: 642 AP-VIIAARNLENRE 655
AP V+ A NL + E
Sbjct: 196 APEVLEGAVNLRDXE 210
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 37/81 (45%), Gaps = 12/81 (14%)
Query: 566 VNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTA 625
V A ++ +E L IV+ DLKP NILLD + DLGLA
Sbjct: 289 VFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLA---------VHV 336
Query: 626 ETASSSIGINGTVGYVAPVII 646
+ G GTVGY+AP ++
Sbjct: 337 PEGQTIKGRVGTVGYMAPEVV 357
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 79/183 (43%), Gaps = 22/183 (12%)
Query: 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLK-QKEASRSFA-AEFNALRNIR 526
+ NF KI EG + +VY VA+K L + E S A E + L+ +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 527 HRNLIKIITICSSIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLR--HHCQ 584
H N++K++ + + + F+ + + + S + + + ++ + L+ C
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 585 P-SIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAP 643
++H DLKP N+L++ + + D GLA+ G T + T+ Y AP
Sbjct: 122 SHRVLHRDLKPENLLINTEGAIKLADFGLARAF-----GVPVRTYXHEV---VTLWYRAP 173
Query: 644 VII 646
I+
Sbjct: 174 EIL 176
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 53/127 (41%), Gaps = 13/127 (10%)
Query: 499 VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDF--KAISNGQLR 556
VA+K +E R F E L++++H N++K +C S + + G LR
Sbjct: 40 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 99
Query: 557 LCNLSLTQRVNIAIDVAFAIEYLRHHCQ-------PSIVHGDLKPSNILLDQDVVTHVGD 609
Q+ ID ++Y C+ +H DL NIL++ + +GD
Sbjct: 100 ----DYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGD 155
Query: 610 LGLAKFL 616
GL K L
Sbjct: 156 FGLTKVL 162
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 53/127 (41%), Gaps = 13/127 (10%)
Query: 499 VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDF--KAISNGQLR 556
VA+K +E R F E L++++H N++K +C S + + G LR
Sbjct: 49 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 108
Query: 557 LCNLSLTQRVNIAIDVAFAIEYLRHHCQ-------PSIVHGDLKPSNILLDQDVVTHVGD 609
Q+ ID ++Y C+ +H DL NIL++ + +GD
Sbjct: 109 ----DYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGD 164
Query: 610 LGLAKFL 616
GL K L
Sbjct: 165 FGLTKVL 171
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 79/183 (43%), Gaps = 22/183 (12%)
Query: 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLK-QKEASRSFA-AEFNALRNIR 526
+ NF KI EG + +VY VA+K L + E S A E + L+ +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 527 HRNLIKIITICSSIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLR--HHCQ 584
H N++K++ + + + F+ + + + S + + + ++ + L+ C
Sbjct: 62 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 121
Query: 585 P-SIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAP 643
++H DLKP N+L++ + + D GLA+ G T + T+ Y AP
Sbjct: 122 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-----GVPVRTYXHEV---VTLWYRAP 173
Query: 644 VII 646
I+
Sbjct: 174 EIL 176
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 62/139 (44%), Gaps = 23/139 (16%)
Query: 499 VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSS-----IDFE---------- 543
VA+K + A + F E L ++H+++++ +C+ + FE
Sbjct: 51 VAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRF 110
Query: 544 ----GFDFKAISNGQ-LRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNIL 598
G D K ++ G+ + L L Q + +A VA + YL VH DL N L
Sbjct: 111 LRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCL 167
Query: 599 LDQDVVTHVGDLGLAKFLY 617
+ Q +V +GD G+++ +Y
Sbjct: 168 VGQGLVVKIGDFGMSRDIY 186
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 63/139 (45%), Gaps = 18/139 (12%)
Query: 488 IREGGFNIVYNVAMKVANLKQKEASRS---FAAEFNALRNIRHRNLIKIITICSSIDFEG 544
++ G + Y+VA+K+ KE S S F E + N+ H L+++ +C+
Sbjct: 25 VKYGKWRGQYDVAIKMI----KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIF 80
Query: 545 FDFKAISNG-------QLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNI 597
+ ++NG ++R Q + + DV A+EYL +H DL N
Sbjct: 81 IITEYMANGCLLNYLREMRH-RFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNC 136
Query: 598 LLDQDVVTHVGDLGLAKFL 616
L++ V V D GL++++
Sbjct: 137 LVNDQGVVKVSDFGLSRYV 155
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 79/183 (43%), Gaps = 22/183 (12%)
Query: 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLK-QKEASRSFA-AEFNALRNIR 526
+ NF KI EG + +VY VA+K L + E S A E + L+ +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 527 HRNLIKIITICSSIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLR--HHCQ 584
H N++K++ + + + F+ + + + S + + + ++ + L+ C
Sbjct: 63 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 122
Query: 585 P-SIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAP 643
++H DLKP N+L++ + + D GLA+ G T + T+ Y AP
Sbjct: 123 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-----GVPVRTYXHEV---VTLWYRAP 174
Query: 644 VII 646
I+
Sbjct: 175 EIL 177
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 78/181 (43%), Gaps = 22/181 (12%)
Query: 480 NNFSPANKIREGGFNIVYN---------VAMKVANLK-QKEASRSFA-AEFNALRNIRHR 528
NF KI EG + +VY VA+K L + E S A E + L+ + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 529 NLIKIITICSSIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLR--HHCQPS 586
N++K++ + + + F+ + + + S + + + ++ + L+ C
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 587 -IVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVI 645
++H DLKP N+L++ + + D GLA+ G T + T+ Y AP I
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAF-----GVPVRTYXHEV---VTLWYRAPEI 173
Query: 646 I 646
+
Sbjct: 174 L 174
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 53/127 (41%), Gaps = 13/127 (10%)
Query: 499 VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD--FKAISNGQLR 556
VA+K +E R F E L++++H N++K +C S + + G LR
Sbjct: 47 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 106
Query: 557 LCNLSLTQRVNIAIDVAFAIEYLRHHCQ-------PSIVHGDLKPSNILLDQDVVTHVGD 609
Q+ ID ++Y C+ +H DL NIL++ + +GD
Sbjct: 107 ----DYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGD 162
Query: 610 LGLAKFL 616
GL K L
Sbjct: 163 FGLTKVL 169
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 37/81 (45%), Gaps = 12/81 (14%)
Query: 566 VNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTA 625
V A ++ +E L IV+ DLKP NILLD + DLGLA
Sbjct: 289 VFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLA---------VHV 336
Query: 626 ETASSSIGINGTVGYVAPVII 646
+ G GTVGY+AP ++
Sbjct: 337 PEGQTIKGRVGTVGYMAPEVV 357
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 79/183 (43%), Gaps = 22/183 (12%)
Query: 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLK-QKEASRSFA-AEFNALRNIR 526
+ NF KI EG + +VY VA+K L + E S A E + L+ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 527 HRNLIKIITICSSIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLR--HHCQ 584
H N++K++ + + + F+ + + + S + + + ++ + L+ C
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 585 P-SIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAP 643
++H DLKP N+L++ + + D GLA+ G T + T+ Y AP
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-----GVPVRTYXHEV---VTLWYRAP 172
Query: 644 VII 646
I+
Sbjct: 173 EIL 175
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 79/183 (43%), Gaps = 22/183 (12%)
Query: 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLK-QKEASRSFA-AEFNALRNIR 526
+ NF KI EG + +VY VA+K L + E S A E + L+ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 527 HRNLIKIITICSSIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLR--HHCQ 584
H N++K++ + + + F+ + + + S + + + ++ + L+ C
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 585 PS-IVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAP 643
++H DLKP N+L++ + + D GLA+ G T + T+ Y AP
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-----GVPVRTYXHEV---VTLWYRAP 172
Query: 644 VII 646
I+
Sbjct: 173 EIL 175
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 90/213 (42%), Gaps = 38/213 (17%)
Query: 458 SNMLSMKQQFPMISHAELSKAT-------NNFSPANKIREGGFNIVYNV--AMKVANLKQ 508
S+ML M Q+ P EL+K N SP G ++ ++VA
Sbjct: 2 SHMLEMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVA---V 58
Query: 509 KEASRSFAA---------EFNALRNIRHRNLIKIITICS-SIDFEGF-DFKAISNGQ-LR 556
K+ SR F + E L++++H N+I ++ + + + E F D +++
Sbjct: 59 KKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD 118
Query: 557 LCNLSLTQRV---NIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLA 613
L N+ Q++ ++ + + L++ I+H DLKPSN+ +++D + D GLA
Sbjct: 119 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 178
Query: 614 KFLYGYEPGTTAETASSSIGINGTVGYVAPVII 646
+ T G T Y AP I+
Sbjct: 179 R-----------HTDDEMTGYVATRWYRAPEIM 200
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 79/183 (43%), Gaps = 22/183 (12%)
Query: 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLK-QKEASRSFA-AEFNALRNIR 526
+ NF KI EG + +VY VA+K L + E S A E + L+ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 527 HRNLIKIITICSSIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLR--HHCQ 584
H N++K++ + + + F+ + + + S + + + ++ + L+ C
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 585 P-SIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAP 643
++H DLKP N+L++ + + D GLA+ G T + T+ Y AP
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-----GVPVRTYXHEV---VTLWYRAP 172
Query: 644 VII 646
I+
Sbjct: 173 EIL 175
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 53/127 (41%), Gaps = 13/127 (10%)
Query: 499 VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDF--KAISNGQLR 556
VA+K +E R F E L++++H N++K +C S + + G LR
Sbjct: 48 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 107
Query: 557 LCNLSLTQRVNIAIDVAFAIEYLRHHCQ-------PSIVHGDLKPSNILLDQDVVTHVGD 609
Q+ ID ++Y C+ +H DL NIL++ + +GD
Sbjct: 108 ----DYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGD 163
Query: 610 LGLAKFL 616
GL K L
Sbjct: 164 FGLTKVL 170
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 78/181 (43%), Gaps = 22/181 (12%)
Query: 480 NNFSPANKIREGGFNIVYN---------VAMKVANLK-QKEASRSFA-AEFNALRNIRHR 528
NF KI EG + +VY VA+K L + E S A E + L+ + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 529 NLIKIITICSSIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLR--HHCQPS 586
N++K++ + + + F+ + + S + + + ++ + L+ C
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 587 -IVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVI 645
++H DLKP N+L++ + + D GLA+ G T + + T+ Y AP I
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAF-----GVPVRTYTHEV---VTLWYRAPEI 173
Query: 646 I 646
+
Sbjct: 174 L 174
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 78/181 (43%), Gaps = 22/181 (12%)
Query: 480 NNFSPANKIREGGFNIVYN---------VAMKVANLK-QKEASRSFA-AEFNALRNIRHR 528
NF KI EG + +VY VA+K L + E S A E + L+ + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 529 NLIKIITICSSIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLR--HHCQP- 585
N++K++ + + + F+ + + + S + + + ++ + L+ C
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 586 SIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVI 645
++H DLKP N+L++ + + D GLA+ G T + T+ Y AP I
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAF-----GVPVRTYXHEV---VTLWYRAPEI 173
Query: 646 I 646
+
Sbjct: 174 L 174
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 66/157 (42%), Gaps = 23/157 (14%)
Query: 502 KVANLKQKEASRS---FAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLRLC 558
KVA KE S S F E + + H L+++ +C F+ + +G L
Sbjct: 53 KVAIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLS-- 110
Query: 559 NLSLTQR--------VNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDL 610
+ TQR + + +DV + YL C ++H DL N L+ ++ V V D
Sbjct: 111 DYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDF 167
Query: 611 GLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIA 647
G+ +F+ + +SS G V + +P + +
Sbjct: 168 GMTRFVLD-------DQYTSSTGTKFPVKWASPEVFS 197
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 91/215 (42%), Gaps = 38/215 (17%)
Query: 456 KDSNMLSMKQQFPMISHAELSKAT-------NNFSPANKIREGGFNIVYNV--AMKVANL 506
+ S+ML M Q+ P EL+K N SP G ++ ++VA
Sbjct: 17 RGSHMLEMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVA-- 74
Query: 507 KQKEASRSFAA---------EFNALRNIRHRNLIKIITICS-SIDFEGF-DFKAISNGQ- 554
K+ SR F + E L++++H N+I ++ + + + E F D +++
Sbjct: 75 -VKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMG 133
Query: 555 LRLCNLSLTQRV---NIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLG 611
L N+ Q++ ++ + + L++ I+H DLKPSN+ +++D + D G
Sbjct: 134 ADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG 193
Query: 612 LAKFLYGYEPGTTAETASSSIGINGTVGYVAPVII 646
LA+ T G T Y AP I+
Sbjct: 194 LAR-----------HTDDEMTGYVATRWYRAPEIM 217
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 53/127 (41%), Gaps = 13/127 (10%)
Query: 499 VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDF--KAISNGQLR 556
VA+K +E R F E L++++H N++K +C S + + G LR
Sbjct: 46 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 105
Query: 557 LCNLSLTQRVNIAIDVAFAIEYLRHHCQ-------PSIVHGDLKPSNILLDQDVVTHVGD 609
Q+ ID ++Y C+ +H DL NIL++ + +GD
Sbjct: 106 ----DYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGD 161
Query: 610 LGLAKFL 616
GL K L
Sbjct: 162 FGLTKVL 168
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 78/176 (44%), Gaps = 25/176 (14%)
Query: 458 SNMLSMKQQFPMISHAELSKATNNFSPANKIREGGFNIV----YNVAMKVA--NLKQKEA 511
S+M + K Q P E ++ G F V YN KVA +LKQ
Sbjct: 2 SHMQTQKPQKPWWED-EWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM 60
Query: 512 S-RSFAAEFNALRNIRHRNLIKIITICSS----IDFEGF------DFKAISNGQLRLCNL 560
S +F AE N ++ ++H+ L+++ + + I E DF +G L
Sbjct: 61 SPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSG----IKL 116
Query: 561 SLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFL 616
++ + +++A +A + ++ + +H DL+ +NIL+ + + D GLA+ +
Sbjct: 117 TINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLI 169
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 78/181 (43%), Gaps = 22/181 (12%)
Query: 480 NNFSPANKIREGGFNIVYN---------VAMKVANLK-QKEASRSFA-AEFNALRNIRHR 528
NF KI EG + +VY VA+K L + E S A E + L+ + H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 529 NLIKIITICSSIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLR--HHCQPS 586
N++K++ + + + F+ + + + S + + + ++ + L+ C
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 123
Query: 587 -IVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVI 645
++H DLKP N+L++ + + D GLA+ G T + T+ Y AP I
Sbjct: 124 RVLHRDLKPQNLLINTEGAIKLADFGLARAF-----GVPVRTYXHEV---VTLWYRAPEI 175
Query: 646 I 646
+
Sbjct: 176 L 176
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 79/183 (43%), Gaps = 22/183 (12%)
Query: 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLK-QKEASRSFA-AEFNALRNIR 526
+ NF KI EG + +VY VA+K L + E S A E + L+ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 527 HRNLIKIITICSSIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLR--HHCQ 584
H N++K++ + + + F+ + + + S + + + ++ + L+ C
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 585 P-SIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAP 643
++H DLKP N+L++ + + D GLA+ G T + T+ Y AP
Sbjct: 121 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-----GVPVRTYXHEV---VTLWYRAP 172
Query: 644 VII 646
I+
Sbjct: 173 EIL 175
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 68/160 (42%), Gaps = 15/160 (9%)
Query: 499 VAMKVANLKQKEASR-SFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQL-- 555
VA+K E R F E + H N+I++ + S + + NG L
Sbjct: 76 VAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDK 135
Query: 556 ----RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLG 611
+ S+ Q V + +A ++YL + + VH DL NIL++ ++V V D G
Sbjct: 136 FLREKDGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFG 192
Query: 612 LAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNL 651
L++ L +P T T+ I I T AP I+ R
Sbjct: 193 LSRVLED-DPEATYTTSGGKIPIRWT----APEAISYRKF 227
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 90/213 (42%), Gaps = 38/213 (17%)
Query: 458 SNMLSMKQQFPMISHAELSKAT-------NNFSPANKIREGGFNIVYNV--AMKVANLKQ 508
S+ML M Q+ P EL+K N SP G ++ ++VA
Sbjct: 1 SHMLEMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVA---V 57
Query: 509 KEASRSFAA---------EFNALRNIRHRNLIKIITICS-SIDFEGF-DFKAISNGQ-LR 556
K+ SR F + E L++++H N+I ++ + + + E F D +++
Sbjct: 58 KKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD 117
Query: 557 LCNLSLTQRV---NIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLA 613
L N+ Q++ ++ + + L++ I+H DLKPSN+ +++D + D GLA
Sbjct: 118 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLA 177
Query: 614 KFLYGYEPGTTAETASSSIGINGTVGYVAPVII 646
+ T G T Y AP I+
Sbjct: 178 R-----------HTDDEMTGYVATRWYRAPEIM 199
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 78/188 (41%), Gaps = 32/188 (17%)
Query: 477 KATNNFSPANKIREGGFNIVYNVAMKVANLKQKEASRSFAAEFNALRNIR---------H 527
K N P +G Y+ ++ N+ K+ SR F + +A R R H
Sbjct: 26 KRYQNLKPIGSGAQGIVCAAYDAILE-RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 84
Query: 528 RNLIKIITICS-SIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYL------- 579
+N+I ++ + + E F I + L + +L Q + + +D + YL
Sbjct: 85 KNIIGLLNVFTPQKSLEEFQDVYIV---MELMDANLCQVIQMELDHE-RMSYLLYQMLCG 140
Query: 580 -RHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTV 638
+H I+H DLKPSNI++ D + D GLA+ TA T+ + T
Sbjct: 141 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---------TAGTSFMMVPFVVTR 191
Query: 639 GYVAPVII 646
Y AP +I
Sbjct: 192 YYRAPEVI 199
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 53/127 (41%), Gaps = 13/127 (10%)
Query: 499 VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDF--KAISNGQLR 556
VA+K +E R F E L++++H N++K +C S + + G LR
Sbjct: 45 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLR 104
Query: 557 LCNLSLTQRVNIAIDVAFAIEYLRHHCQ-------PSIVHGDLKPSNILLDQDVVTHVGD 609
Q+ ID ++Y C+ +H DL NIL++ + +GD
Sbjct: 105 ----EYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGD 160
Query: 610 LGLAKFL 616
GL K L
Sbjct: 161 FGLTKVL 167
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 90/213 (42%), Gaps = 38/213 (17%)
Query: 458 SNMLSMKQQFPMISHAELSKAT-------NNFSPANKIREGGFNIVYNV--AMKVANLKQ 508
S+ML M Q+ P EL+K N SP G ++ ++VA
Sbjct: 2 SHMLEMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVA---V 58
Query: 509 KEASRSFAA---------EFNALRNIRHRNLIKIITICS-SIDFEGF-DFKAISNGQ-LR 556
K+ SR F + E L++++H N+I ++ + + + E F D +++
Sbjct: 59 KKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGAD 118
Query: 557 LCNLSLTQRV---NIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLA 613
L N+ Q++ ++ + + L++ I+H DLKPSN+ +++D + D GLA
Sbjct: 119 LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLA 178
Query: 614 KFLYGYEPGTTAETASSSIGINGTVGYVAPVII 646
+ T G T Y AP I+
Sbjct: 179 R-----------HTDDEMTGYVATRWYRAPEIM 200
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 57/142 (40%), Gaps = 24/142 (16%)
Query: 517 AEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAI 576
AE L+++ H N+IKI + + G+L L + Q A+ +
Sbjct: 69 AEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGEL-LERIVSAQARGKALSEGYVA 127
Query: 577 EYLRH--------HCQPSIVHGDLKPSNILLDQDVVTH----VGDLGLAKFLYGYEPGTT 624
E ++ H Q +VH DLKP NIL QD H + D GLA+ E T
Sbjct: 128 ELMKQMMNALAYFHSQ-HVVHKDLKPENILF-QDTSPHSPIKIIDFGLAELFKSDEHSTN 185
Query: 625 AETASSSIGINGTVGYVAPVII 646
A GT Y+AP +
Sbjct: 186 A---------AGTALYMAPEVF 198
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 61/122 (50%), Gaps = 15/122 (12%)
Query: 503 VANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDF---KAISNGQLRLCN 559
V +K +++F AE + + +RH NL++++ + ++ +G + + ++ G L
Sbjct: 40 VKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVI--VEEKGGLYIVTEYMAKGSLVDYL 97
Query: 560 LSLTQRV-------NIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGL 612
S + V ++DV A+EYL + + VH DL N+L+ +D V V D GL
Sbjct: 98 RSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGL 154
Query: 613 AK 614
K
Sbjct: 155 TK 156
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 61/122 (50%), Gaps = 15/122 (12%)
Query: 503 VANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDF---KAISNGQLRLCN 559
V +K +++F AE + + +RH NL++++ + ++ +G + + ++ G L
Sbjct: 221 VKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVI--VEEKGGLYIVTEYMAKGSLVDYL 278
Query: 560 LSLTQRV-------NIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGL 612
S + V ++DV A+EYL + + VH DL N+L+ +D V V D GL
Sbjct: 279 RSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGL 335
Query: 613 AK 614
K
Sbjct: 336 TK 337
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 68/156 (43%), Gaps = 23/156 (14%)
Query: 477 KATNNFSPANKIREGGFNIVYNVAMKVANLKQKEASRSFAAEFNALRNIR---------H 527
K N P +G Y+ ++ N+ K+ SR F + +A R R H
Sbjct: 24 KRYQNLKPIGSGAQGIVVAAYDAILE-RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNH 82
Query: 528 RNLIKIITICS-SIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYL------- 579
+N+I ++ + + E F I + L + +L+Q + + +D + YL
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIV---MELMDANLSQVIQMELDHE-RMSYLLYQMLVG 138
Query: 580 -RHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
+H I+H DLKPSNI++ D + D GLA+
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 68/153 (44%), Gaps = 15/153 (9%)
Query: 478 ATNNFSPANKIR-EGGFNIVYNVAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKII-- 534
T ++ KIR + I+ + ++ + E + +E N LR ++H N+++
Sbjct: 15 GTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAE-KQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 535 -------TICSSIDF-EGFDFKAI---SNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHC 583
T+ +++ EG D ++ + + + RV + +A + R
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 584 QPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFL 616
+++H DLKP+N+ LD +GD GLA+ L
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL 166
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 68/153 (44%), Gaps = 15/153 (9%)
Query: 478 ATNNFSPANKIR-EGGFNIVYNVAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKII-- 534
T ++ KIR + I+ + ++ + E + +E N LR ++H N+++
Sbjct: 15 GTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAE-KQMLVSEVNLLRELKHPNIVRYYDR 73
Query: 535 -------TICSSIDF-EGFDFKAI---SNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHC 583
T+ +++ EG D ++ + + + RV + +A + R
Sbjct: 74 IIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDG 133
Query: 584 QPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFL 616
+++H DLKP+N+ LD +GD GLA+ L
Sbjct: 134 GHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL 166
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 61/122 (50%), Gaps = 15/122 (12%)
Query: 503 VANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDF---KAISNGQLRLCN 559
V +K +++F AE + + +RH NL++++ + ++ +G + + ++ G L
Sbjct: 49 VKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVI--VEEKGGLYIVTEYMAKGSLVDYL 106
Query: 560 LSLTQRV-------NIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGL 612
S + V ++DV A+EYL + + VH DL N+L+ +D V V D GL
Sbjct: 107 RSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGL 163
Query: 613 AK 614
K
Sbjct: 164 TK 165
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 68/156 (43%), Gaps = 23/156 (14%)
Query: 477 KATNNFSPANKIREGGFNIVYNVAMKVANLKQKEASRSFAAEFNALRNIR---------H 527
K N P +G Y+ ++ N+ K+ SR F + +A R R H
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILE-RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNH 82
Query: 528 RNLIKIITICS-SIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYL------- 579
+N+I ++ + + E F I + L + +L+Q + + +D + YL
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIV---MELMDANLSQVIQMELDHE-RMSYLLYQMLVG 138
Query: 580 -RHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
+H I+H DLKPSNI++ D + D GLA+
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 63/169 (37%), Gaps = 37/169 (21%)
Query: 480 NNFSPANKIREGGFNIVYNVAMKVANLKQ------------KEASRSFAAEFNALRNI-R 526
N+ + I EG F V +K L+ K+ R FA E L +
Sbjct: 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 84
Query: 527 HRNLIKIITICSSIDFEGFDFKAISNGQL---------------------RLCNLSLTQR 565
H N+I ++ C + + +G L LS Q
Sbjct: 85 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 144
Query: 566 VNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
++ A DVA ++YL Q +H DL NIL+ ++ V + D GL++
Sbjct: 145 LHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR 190
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 68/156 (43%), Gaps = 23/156 (14%)
Query: 477 KATNNFSPANKIREGGFNIVYNVAMKVANLKQKEASRSFAAEFNALRNIR---------H 527
K N P +G Y+ ++ N+ K+ SR F + +A R R H
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILE-RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNH 82
Query: 528 RNLIKIITICS-SIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYL------- 579
+N+I ++ + + E F I + L + +L+Q + + +D + YL
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIV---MELMDANLSQVIQMELDHE-RMSYLLYQMLVG 138
Query: 580 -RHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
+H I+H DLKPSNI++ D + D GLA+
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 60/134 (44%), Gaps = 20/134 (14%)
Query: 496 VYNVAMKVANLKQKEASRS---FAAEFNALRNIRHRNLIKI--------ITICSSIDFEG 544
YN KVA K S S F AE N ++ ++H L+K+ I I + +G
Sbjct: 208 TYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMAKG 267
Query: 545 --FDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQD 602
DF G L + ++ + +A + ++ Q + +H DL+ +NIL+
Sbjct: 268 SLLDFLKSDEG----SKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSAS 320
Query: 603 VVTHVGDLGLAKFL 616
+V + D GLA+ +
Sbjct: 321 LVCKIADFGLARVI 334
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 68/156 (43%), Gaps = 23/156 (14%)
Query: 477 KATNNFSPANKIREGGFNIVYNVAMKVANLKQKEASRSFAAEFNALRNIR---------H 527
K N P +G Y+ ++ N+ K+ SR F + +A R R H
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILE-RNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNH 82
Query: 528 RNLIKIITICS-SIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYL------- 579
+N+I ++ + + E F I + L + +L+Q + + +D + YL
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIV---MELMDANLSQVIQMELDHE-RMSYLLYQMLCG 138
Query: 580 -RHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
+H I+H DLKPSNI++ D + D GLA+
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 61/122 (50%), Gaps = 15/122 (12%)
Query: 503 VANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDF---KAISNGQLRLCN 559
V +K +++F AE + + +RH NL++++ + ++ +G + + ++ G L
Sbjct: 34 VKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVI--VEEKGGLYIVTEYMAKGSLVDYL 91
Query: 560 LSLTQRV-------NIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGL 612
S + V ++DV A+EYL + + VH DL N+L+ +D V V D GL
Sbjct: 92 RSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGL 148
Query: 613 AK 614
K
Sbjct: 149 TK 150
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 68/156 (43%), Gaps = 23/156 (14%)
Query: 477 KATNNFSPANKIREGGFNIVYNVAMKVANLKQKEASRSFAAEFNALRNIR---------H 527
K N P +G Y+ ++ N+ K+ SR F + +A R R H
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILE-RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 528 RNLIKIITICS-SIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYL------- 579
+N+I ++ + + E F I + L + +L+Q + + +D + YL
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIV---MELMDANLSQVIQMELDHE-RMSYLLYQMLCG 138
Query: 580 -RHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
+H I+H DLKPSNI++ D + D GLA+
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR 174
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 69/154 (44%), Gaps = 17/154 (11%)
Query: 478 ATNNFSPANKIRE--GGFNIVYNVAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKII- 534
T ++ KIR G +V+ + ++ + E + +E N LR ++H N+++
Sbjct: 15 GTGSYGRCQKIRRKSDGKILVWK-ELDYGSMTEAE-KQMLVSEVNLLRELKHPNIVRYYD 72
Query: 535 --------TICSSIDF-EGFDFKAI---SNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHH 582
T+ +++ EG D ++ + + + RV + +A + R
Sbjct: 73 RIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSD 132
Query: 583 CQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFL 616
+++H DLKP+N+ LD +GD GLA+ L
Sbjct: 133 GGHTVLHRDLKPANVFLDGKQNVKLGDFGLARIL 166
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 63/169 (37%), Gaps = 37/169 (21%)
Query: 480 NNFSPANKIREGGFNIVYNVAMKVANLKQ------------KEASRSFAAEFNALRNI-R 526
N+ + I EG F V +K L+ K+ R FA E L +
Sbjct: 15 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 74
Query: 527 HRNLIKIITICSSIDFEGFDFKAISNGQL---------------------RLCNLSLTQR 565
H N+I ++ C + + +G L LS Q
Sbjct: 75 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 134
Query: 566 VNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
++ A DVA ++YL Q +H DL NIL+ ++ V + D GL++
Sbjct: 135 LHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR 180
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 54/126 (42%), Gaps = 11/126 (8%)
Query: 499 VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDF--KAISNGQLR 556
VA+K +E R F E L++++H N++K +C S + + G LR
Sbjct: 45 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 104
Query: 557 LCNLSLTQRVN------IAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDL 610
+ +R++ + +EYL +H DL NIL++ + +GD
Sbjct: 105 DYLQAHAERIDHIKLLQYTSQICKGMEYL---GTKRYIHRDLATRNILVENENRVKIGDF 161
Query: 611 GLAKFL 616
GL K L
Sbjct: 162 GLTKVL 167
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 61/133 (45%), Gaps = 20/133 (15%)
Query: 497 YNVAMKVANLKQKEASRS---FAAEFNALRNIRHRNLIKI--------ITICSSIDFEG- 544
YN KVA K S S F AE N ++ ++H L+K+ I I + +G
Sbjct: 36 YNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMAKGS 95
Query: 545 -FDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDV 603
DF G + L + ++ + +A + ++ Q + +H DL+ +NIL+ +
Sbjct: 96 LLDFLKSDEGSKQ----PLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASL 148
Query: 604 VTHVGDLGLAKFL 616
V + D GLA+ +
Sbjct: 149 VCKIADFGLARVI 161
>pdb|4FMZ|A Chain A, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
pdb|4FMZ|B Chain B, Crystal Structure Of An Internalin (Inlf) From Listeria
Monocytogenes Str. 4b F2365 At 1.91 A Resolution
Length = 347
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 93/197 (47%), Gaps = 20/197 (10%)
Query: 128 ASSLEMIEFSRN----QFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCS 183
+S++ IE+ N +G D S L NL + + NL GT N++ I+ L N +
Sbjct: 56 VASIQGIEYLTNLEYLNLNGNQITDISPLSNL----VKLTNLYIGT-NKITDISALQNLT 110
Query: 184 KLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNR-ISSTIPHGIRNLVNLNWLTMESS 242
L LY N + + P +ANL+ + +G+N +S P + N LN+LT+ S
Sbjct: 111 NLRELYLNEDNISDISP--LANLTKXYS-LNLGANHNLSDLSP--LSNXTGLNYLTVTES 165
Query: 243 QLIGTIPPLIGETPNLQLLNIGGNHLQG-SILSSLGNLTLQTYLFNNLQGNIPSSLANCK 301
++ P I +L L++ N ++ S L+SL +L T N + P +AN
Sbjct: 166 KVKDVTP--IANLTDLYSLSLNYNQIEDISPLASLTSLHYFTAYVNQITDITP--VANXT 221
Query: 302 SLLGLSVSHNKLTSTLP 318
L L + +NK+T P
Sbjct: 222 RLNSLKIGNNKITDLSP 238
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 78/183 (42%), Gaps = 22/183 (12%)
Query: 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLK-QKEASRSFA-AEFNALRNIR 526
+ NF KI EG + +VY VA+K L + E S A E + L+ +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 527 HRNLIKIITICSSIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLR--HHCQ 584
H N++K++ + + + F+ + + S + + + ++ + L+ C
Sbjct: 64 HPNIVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCH 123
Query: 585 PS-IVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAP 643
++H DLKP N+L++ + + D GLA+ G T + T+ Y AP
Sbjct: 124 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-----GVPVRTYXHEV---VTLWYRAP 175
Query: 644 VII 646
I+
Sbjct: 176 EIL 178
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 74/190 (38%), Gaps = 39/190 (20%)
Query: 480 NNFSPANKIREGGFNIVYNV---------AMKVANLKQKEASRSFAAEFNALRNIRHRNL 530
N+FS I GGF VY AMK + K+ + + N R +
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALN------ERIM 242
Query: 531 IKIIT-------ICSSIDFE-----GFDFKAISNGQLR--LCNLSLTQRVNIAIDVAFAI 576
+ +++ +C S F F ++ G L L + ++ A I
Sbjct: 243 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEII 302
Query: 577 EYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGING 636
L H +V+ DLKP+NILLD+ + DLGLA +P + G
Sbjct: 303 LGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV----------G 352
Query: 637 TVGYVAPVII 646
T GY+AP ++
Sbjct: 353 THGYMAPEVL 362
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 74/190 (38%), Gaps = 39/190 (20%)
Query: 480 NNFSPANKIREGGFNIVYNV---------AMKVANLKQKEASRSFAAEFNALRNIRHRNL 530
N+FS I GGF VY AMK + K+ + + N R +
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALN------ERIM 242
Query: 531 IKIIT-------ICSSIDFE-----GFDFKAISNGQLR--LCNLSLTQRVNIAIDVAFAI 576
+ +++ +C S F F ++ G L L + ++ A I
Sbjct: 243 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEII 302
Query: 577 EYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGING 636
L H +V+ DLKP+NILLD+ + DLGLA +P + G
Sbjct: 303 LGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV----------G 352
Query: 637 TVGYVAPVII 646
T GY+AP ++
Sbjct: 353 THGYMAPEVL 362
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 74/190 (38%), Gaps = 39/190 (20%)
Query: 480 NNFSPANKIREGGFNIVYNV---------AMKVANLKQKEASRSFAAEFNALRNIRHRNL 530
N+FS I GGF VY AMK + K+ + + N R +
Sbjct: 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALN------ERIM 242
Query: 531 IKIIT-------ICSSIDFE-----GFDFKAISNGQLR--LCNLSLTQRVNIAIDVAFAI 576
+ +++ +C S F F ++ G L L + ++ A I
Sbjct: 243 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEII 302
Query: 577 EYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGING 636
L H +V+ DLKP+NILLD+ + DLGLA +P + G
Sbjct: 303 LGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV----------G 352
Query: 637 TVGYVAPVII 646
T GY+AP ++
Sbjct: 353 THGYMAPEVL 362
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 78/183 (42%), Gaps = 22/183 (12%)
Query: 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLK-QKEASRSFA-AEFNALRNIR 526
+ NF KI EG + +VY VA+K L + E S A E + L+ +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 527 HRNLIKIITICSSIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLR--HHCQ 584
H N++K++ + + + F+ + + S + + + ++ + L+ C
Sbjct: 61 HPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCH 120
Query: 585 P-SIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAP 643
++H DLKP N+L++ + + D GLA+ G T + T+ Y AP
Sbjct: 121 SHRVLHRDLKPENLLINTEGAIKLADFGLARAF-----GVPVRTYXHEV---VTLWYRAP 172
Query: 644 VII 646
I+
Sbjct: 173 EIL 175
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 20/132 (15%)
Query: 496 VYNVAMKVANLKQKEASRS---FAAEFNALRNIRHRNLIKI--------ITICSSIDFEG 544
YN KVA K S S F AE N ++ ++H L+K+ I I + +G
Sbjct: 202 TYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMAKG 261
Query: 545 --FDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQD 602
DF G L + ++ + +A + ++ Q + +H DL+ +NIL+
Sbjct: 262 SLLDFLKSDEG----SKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSAS 314
Query: 603 VVTHVGDLGLAK 614
+V + D GLA+
Sbjct: 315 LVCKIADFGLAR 326
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 74/190 (38%), Gaps = 39/190 (20%)
Query: 480 NNFSPANKIREGGFNIVYNV---------AMKVANLKQKEASRSFAAEFNALRNIRHRNL 530
N+FS I GGF VY AMK + K+ + + N R +
Sbjct: 188 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALN------ERIM 241
Query: 531 IKIIT-------ICSSIDFE-----GFDFKAISNGQLR--LCNLSLTQRVNIAIDVAFAI 576
+ +++ +C S F F ++ G L L + ++ A I
Sbjct: 242 LSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEII 301
Query: 577 EYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGING 636
L H +V+ DLKP+NILLD+ + DLGLA +P + G
Sbjct: 302 LGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV----------G 351
Query: 637 TVGYVAPVII 646
T GY+AP ++
Sbjct: 352 THGYMAPEVL 361
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 79/173 (45%), Gaps = 27/173 (15%)
Query: 485 ANKIREGGFNIVYNVAMKVANLKQKEAS-RSFAAEFNALRNIRHRNLIKIITICSS---- 539
A ++ G +N VA+K +LKQ S +F AE N ++ ++H+ L+++ + +
Sbjct: 26 AGEVWMGYYNGHTKVAVK--SLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIY 83
Query: 540 IDFEGF------DFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLK 593
I E DF +G L++ + +++A +A + ++ + +H DL+
Sbjct: 84 IITEYMENGSLVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLR 136
Query: 594 PSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVII 646
+NIL+ + + D GLA+ + E ++ G + + AP I
Sbjct: 137 AANILVSDTLSCKIADFGLARLIEDAE-------XTAREGAKFPIKWTAPEAI 182
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 68/156 (43%), Gaps = 23/156 (14%)
Query: 477 KATNNFSPANKIREGGFNIVYNVAMKVANLKQKEASRSFAAEFNALRNIR---------H 527
K N P +G Y+ ++ N+ K+ SR F + +A R R H
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILE-RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 528 RNLIKIITICS-SIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYL------- 579
+N+I ++ + + E F I + L + +L+Q + + +D + YL
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIV---MELMDANLSQVIQMELDHE-RMSYLLYQMLCG 138
Query: 580 -RHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
+H I+H DLKPSNI++ D + D GLA+
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 78/181 (43%), Gaps = 22/181 (12%)
Query: 480 NNFSPANKIREGGFNIVYN---------VAMKVANLK-QKEASRSFAA-EFNALRNIRHR 528
NF KI EG + +VY VA+ L + E S A E + L+ + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 529 NLIKIITICSSIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLR--HHCQPS 586
N++K++ + + + F+ + + + S + + + ++ + L+ C
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 122
Query: 587 -IVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVI 645
++H DLKP N+L++ + + D GLA+ G T + + T+ Y AP I
Sbjct: 123 RVLHRDLKPQNLLINTEGAIKLADFGLARAF-----GVPVRTYTHEV---VTLWYRAPEI 174
Query: 646 I 646
+
Sbjct: 175 L 175
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/187 (20%), Positives = 77/187 (41%), Gaps = 25/187 (13%)
Query: 476 SKATNNFSPANKIREGGFNIVYNVAMKVANLK--------QKEASRSFAA---EFNALRN 524
+K ++N+ ++ +G F++V K L+ +K ++R F E R
Sbjct: 25 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRK 84
Query: 525 IRHRNLIKIITICSSIDFEGFDFKAISNGQL--RLCNLSLTQRVNIAIDVAFAIEYLRHH 582
++H N++++ F F ++ G+L + + + + +E + +
Sbjct: 85 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYC 144
Query: 583 CQPSIVHGDLKPSNILL---DQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVG 639
IVH +LKP N+LL + + D GLA + + G GT G
Sbjct: 145 HSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA---------IEVNDSEAWHGFAGTPG 195
Query: 640 YVAPVII 646
Y++P ++
Sbjct: 196 YLSPEVL 202
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 78/181 (43%), Gaps = 22/181 (12%)
Query: 480 NNFSPANKIREGGFNIVYN---------VAMKVANLK-QKEASRSFAA-EFNALRNIRHR 528
NF KI EG + +VY VA+ L + E S A E + L+ + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 529 NLIKIITICSSIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLR--HHCQPS 586
N++K++ + + + F+ + + + S + + + ++ + L+ C
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH 121
Query: 587 -IVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVI 645
++H DLKP N+L++ + + D GLA+ G T + + T+ Y AP I
Sbjct: 122 RVLHRDLKPQNLLINTEGAIKLADFGLARAF-----GVPVRTYTHEV---VTLWYRAPEI 173
Query: 646 I 646
+
Sbjct: 174 L 174
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 61/142 (42%), Gaps = 11/142 (7%)
Query: 499 VAMKVANLKQKEASRS-FAAEFNALRNIRHRNLIKIITICSSIDFEGFDF--KAISNGQL 555
VA+K RS + E + LR + H ++IK C + + + G L
Sbjct: 46 VAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSL 105
Query: 556 R----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLG 611
R ++ L Q + A + + YL H Q +H +L N+LLD D + +GD G
Sbjct: 106 RDYLPRHSIGLAQLLLFAQQICEGMAYL--HAQ-HYIHRNLAARNVLLDNDRLVKIGDFG 162
Query: 612 LAKFL-YGYEPGTTAETASSSI 632
LAK + G+E E S +
Sbjct: 163 LAKAVPEGHEYYRVREDGDSPV 184
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 14/94 (14%)
Query: 556 RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615
R+ S A + EYL H +++ DLKP N+L+DQ V D G AK
Sbjct: 134 RIGRFSEPHARFYAAQIVLTFEYL-HSL--DLIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 616 LYGYEPGTTAETASSSIGINGTVGYVAPVIIAAR 649
+ G + + GT Y+AP II ++
Sbjct: 191 VKG-----------RTWXLXGTPEYLAPEIILSK 213
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 58/128 (45%), Gaps = 14/128 (10%)
Query: 498 NVAMKVANLKQKEAS-RSFAAEFNALRNIRHRNLIKIITICSSIDF--------EGFDFK 548
N + + LK S SF E ++ ++H L+++ + S +G
Sbjct: 33 NTKVAIKTLKPGTMSPESFLEEAQIMKKLKHDKLVQLYAVVSEEPIYIVTEYMNKGSLLD 92
Query: 549 AISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVG 608
+ +G+ R L L V++A VA + Y+ + +H DL+ +NIL+ ++ +
Sbjct: 93 FLKDGEGR--ALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGNGLICKIA 147
Query: 609 DLGLAKFL 616
D GLA+ +
Sbjct: 148 DFGLARLI 155
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 70/160 (43%), Gaps = 24/160 (15%)
Query: 500 AMKV---ANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEG-----FDFKAIS 551
AMKV A LK ++ R+ E + L + H ++K+ + EG DF +
Sbjct: 56 AMKVLKKATLKVRDRVRT-KMERDILVEVNHPFIVKLHYAFQT---EGKLYLILDF--LR 109
Query: 552 NGQL--RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGD 609
G L RL + ++ +A L H I++ DLKP NILLD++ + D
Sbjct: 110 GGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTD 169
Query: 610 LGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAAR 649
GL+K + + + GTV Y+AP ++ R
Sbjct: 170 FGLSK--------ESIDHEKKAYSFCGTVEYMAPEVVNRR 201
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 74/180 (41%), Gaps = 21/180 (11%)
Query: 479 TNNFSPANKIREGGFNIVYNVAMK-------VANLKQKEASRSFAAEFNALRNIRHRNLI 531
++ F +++ G +IVY K + LK+ + E L + H N+I
Sbjct: 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNII 111
Query: 532 KIITICSSIDFEGFDFKAISNGQL--RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVH 589
K+ I + + ++ G+L R+ + A V +E + + + IVH
Sbjct: 112 KLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVH 171
Query: 590 GDLKPSNILLDQ---DVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVII 646
DLKP N+L D + D GL+K + E +T + GT GY AP I+
Sbjct: 172 RDLKPENLLYATPAPDAPLKIADFGLSKIV---EHQVLMKT------VCGTPGYCAPEIL 222
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 18/109 (16%)
Query: 518 EFNALRNIRHRNLIKIITICSSIDFEGFD------------FKAISNGQLRLCNLSLTQR 565
E L + H +++K++ I D E FD FK + + L L +
Sbjct: 102 EIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIK-- 159
Query: 566 VNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
+ ++ ++Y+ I+H DLKP+N L++QD V D GLA+
Sbjct: 160 -TLLYNLLVGVKYVH---SAGILHRDLKPANCLVNQDCSVKVCDFGLAR 204
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 65/133 (48%), Gaps = 20/133 (15%)
Query: 497 YNVAMKVA--NLKQKEAS-RSFAAEFNALRNIRHRNLIKIITICSS----IDFEGF---- 545
YN KVA +LKQ S +F AE N ++ ++H+ L+++ + + I E
Sbjct: 42 YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGS 101
Query: 546 --DFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDV 603
DF +G L++ + +++A +A + ++ + +H DL+ +NIL+ +
Sbjct: 102 LVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTL 154
Query: 604 VTHVGDLGLAKFL 616
+ D GLA+ +
Sbjct: 155 SCKIADFGLARLI 167
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 60/145 (41%), Gaps = 20/145 (13%)
Query: 511 ASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLRLCNLSLTQR----- 565
+ F E + + H L+++ +C F+ + +G L + TQR
Sbjct: 45 SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLS--DYLRTQRGLFAA 102
Query: 566 ---VNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPG 622
+ + +DV + YL C ++H DL N L+ ++ V V D G+ +F+
Sbjct: 103 ETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD---- 155
Query: 623 TTAETASSSIGINGTVGYVAPVIIA 647
+ +SS G V + +P + +
Sbjct: 156 ---DQYTSSTGTKFPVKWASPEVFS 177
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 70/161 (43%), Gaps = 24/161 (14%)
Query: 500 AMKV---ANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEG-----FDFKAIS 551
AMKV A LK ++ R+ E + L + H ++K+ + EG DF +
Sbjct: 56 AMKVLKKATLKVRDRVRT-KMERDILVEVNHPFIVKL---HYAFQTEGKLYLILDF--LR 109
Query: 552 NGQL--RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGD 609
G L RL + ++ +A L H I++ DLKP NILLD++ + D
Sbjct: 110 GGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTD 169
Query: 610 LGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARN 650
GL+K + + + GTV Y+AP ++ R
Sbjct: 170 FGLSK--------ESIDHEKKAYSFCGTVEYMAPEVVNRRG 202
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/187 (20%), Positives = 77/187 (41%), Gaps = 25/187 (13%)
Query: 476 SKATNNFSPANKIREGGFNIVYNVAMKVANLK--------QKEASRSFAA---EFNALRN 524
+K ++N+ ++ +G F++V K L+ +K ++R F E R
Sbjct: 2 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRK 61
Query: 525 IRHRNLIKIITICSSIDFEGFDFKAISNGQL--RLCNLSLTQRVNIAIDVAFAIEYLRHH 582
++H N++++ F F ++ G+L + + + + +E + +
Sbjct: 62 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYC 121
Query: 583 CQPSIVHGDLKPSNILL---DQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVG 639
IVH +LKP N+LL + + D GLA + + G GT G
Sbjct: 122 HSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA---------IEVNDSEAWHGFAGTPG 172
Query: 640 YVAPVII 646
Y++P ++
Sbjct: 173 YLSPEVL 179
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 50/111 (45%), Gaps = 15/111 (13%)
Query: 543 EGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLD-- 600
EG D + N C L + D++ A+ YL + I+H DLKP NI+L
Sbjct: 101 EGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPG 157
Query: 601 -QDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARN 650
Q ++ + DLG AK L E + + GT+ Y+AP ++ +
Sbjct: 158 PQRLIHKIIDLGYAKEL------DQGELCTEFV---GTLQYLAPELLEQKK 199
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 53/127 (41%), Gaps = 13/127 (10%)
Query: 499 VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDF--KAISNGQLR 556
VA+K +E R F E L++++H N++K +C S + + G LR
Sbjct: 43 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 102
Query: 557 LCNLSLTQRVNIAIDVAFAIEYLRHHCQ-------PSIVHGDLKPSNILLDQDVVTHVGD 609
Q+ ID ++Y C+ +H +L NIL++ + +GD
Sbjct: 103 ----DYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRNLATRNILVENENRVKIGD 158
Query: 610 LGLAKFL 616
GL K L
Sbjct: 159 FGLTKVL 165
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 77/188 (40%), Gaps = 32/188 (17%)
Query: 477 KATNNFSPANKIREGGFNIVYNVAMKVANLKQKEASRSFAAEFNALRNIR---------H 527
K N P +G Y+ ++ N+ K+ SR F + +A R R H
Sbjct: 29 KRYQNLKPIGSGAQGIVCAAYDAILE-RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 87
Query: 528 RNLIKIITICS-SIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYL------- 579
+N+I ++ + + E F I + L + +L Q + + +D + YL
Sbjct: 88 KNIIGLLNVFTPQKSLEEFQDVYIV---MELMDANLCQVIQMELDHE-RMSYLLYQMLCG 143
Query: 580 -RHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTV 638
+H I+H DLKPSNI++ D + D GLA+ TA T+ T
Sbjct: 144 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---------TAGTSFMMTPYVVTR 194
Query: 639 GYVAPVII 646
Y AP +I
Sbjct: 195 YYRAPEVI 202
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 65/133 (48%), Gaps = 20/133 (15%)
Query: 497 YNVAMKVA--NLKQKEAS-RSFAAEFNALRNIRHRNLIKIITICSS----IDFEGF---- 545
YN KVA +LKQ S +F AE N ++ ++H+ L+++ + + I E
Sbjct: 40 YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGS 99
Query: 546 --DFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDV 603
DF +G L++ + +++A +A + ++ + +H DL+ +NIL+ +
Sbjct: 100 LVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTL 152
Query: 604 VTHVGDLGLAKFL 616
+ D GLA+ +
Sbjct: 153 SCKIADFGLARLI 165
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 50/111 (45%), Gaps = 15/111 (13%)
Query: 543 EGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLD-- 600
EG D + N C L + D++ A+ YL + I+H DLKP NI+L
Sbjct: 102 EGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPG 158
Query: 601 -QDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARN 650
Q ++ + DLG AK L E + + GT+ Y+AP ++ +
Sbjct: 159 PQRLIHKIIDLGYAKEL------DQGELCTEFV---GTLQYLAPELLEQKK 200
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 67/150 (44%), Gaps = 30/150 (20%)
Query: 509 KEASRSFAAEFNALRNIR-HRNLIKIITICSSIDFEGFDFKAISNGQLRLCNLSLTQRVN 567
+E + E + LR + H N+I++ + F F + G+L LT++V
Sbjct: 64 QELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGEL---FDYLTEKVT 120
Query: 568 IA-----------IDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFL 616
++ ++V A+ L +IVH DLKP NILLD D+ + D G + L
Sbjct: 121 LSEKETRKIMRALLEVICALHKL------NIVHRDLKPENILLDDDMNIKLTDFGFSCQL 174
Query: 617 YGYEPGTTAETASSSIGINGTVGYVAPVII 646
+PG + + GT Y+AP II
Sbjct: 175 ---DPGEKLRS------VCGTPSYLAPEII 195
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 70/161 (43%), Gaps = 24/161 (14%)
Query: 500 AMKV---ANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEG-----FDFKAIS 551
AMKV A LK ++ R+ E + L + H ++K+ + EG DF +
Sbjct: 57 AMKVLKKATLKVRDRVRT-KMERDILVEVNHPFIVKL---HYAFQTEGKLYLILDF--LR 110
Query: 552 NGQL--RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGD 609
G L RL + ++ +A L H I++ DLKP NILLD++ + D
Sbjct: 111 GGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTD 170
Query: 610 LGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARN 650
GL+K + + + GTV Y+AP ++ R
Sbjct: 171 FGLSK--------ESIDHEKKAYSFCGTVEYMAPEVVNRRG 203
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 65/133 (48%), Gaps = 20/133 (15%)
Query: 497 YNVAMKVA--NLKQKEAS-RSFAAEFNALRNIRHRNLIKIITICSS----IDFEGF---- 545
YN KVA +LKQ S +F AE N ++ ++H+ L+++ + + I E
Sbjct: 43 YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGS 102
Query: 546 --DFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDV 603
DF +G L++ + +++A +A + ++ + +H DL+ +NIL+ +
Sbjct: 103 LVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTL 155
Query: 604 VTHVGDLGLAKFL 616
+ D GLA+ +
Sbjct: 156 SCKIADFGLARLI 168
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 14/94 (14%)
Query: 556 RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615
R+ S A + EYL H +++ DLKP N+L+DQ V D G AK
Sbjct: 134 RIGRFSEPHARFYAAQIVLTFEYL-HSL--DLIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 616 LYGYEPGTTAETASSSIGINGTVGYVAPVIIAAR 649
+ G + + GT Y+AP II ++
Sbjct: 191 VKG-----------RTWXLAGTPEYLAPEIILSK 213
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 61/142 (42%), Gaps = 11/142 (7%)
Query: 499 VAMKVANLKQKEASRS-FAAEFNALRNIRHRNLIKIITICSSIDFEGFDF--KAISNGQL 555
VA+K RS + E + LR + H ++IK C + + + G L
Sbjct: 46 VAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSL 105
Query: 556 R----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLG 611
R ++ L Q + A + + YL H Q +H +L N+LLD D + +GD G
Sbjct: 106 RDYLPRHSIGLAQLLLFAQQICEGMAYL--HSQ-HYIHRNLAARNVLLDNDRLVKIGDFG 162
Query: 612 LAKFL-YGYEPGTTAETASSSI 632
LAK + G+E E S +
Sbjct: 163 LAKAVPEGHEYYRVREDGDSPV 184
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 14/94 (14%)
Query: 556 RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615
R+ S A + EYL H +++ DLKP N+L+DQ V D G AK
Sbjct: 134 RIGRFSEPHARFYAAQIVLTFEYL-HSL--DLIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 616 LYGYEPGTTAETASSSIGINGTVGYVAPVIIAAR 649
+ G + + GT Y+AP II ++
Sbjct: 191 VKG-----------RTWXLCGTPEYLAPAIILSK 213
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 60/140 (42%), Gaps = 15/140 (10%)
Query: 482 FSPANKIR--EGGFNIVYNVAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSS 539
+ KIR E + + + M +A+L + R +AA + RN +K +T
Sbjct: 33 YYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAW------LERRNFVKPMTAVKK 86
Query: 540 IDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAI-----EYLRHHCQPSIVHGDLKP 594
+ NG L +L ++ +N D + + E L + I+H DLKP
Sbjct: 87 KSTLFIQMEYCENGTL--YDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKP 144
Query: 595 SNILLDQDVVTHVGDLGLAK 614
NI +D+ +GD GLAK
Sbjct: 145 MNIFIDESRNVKIGDFGLAK 164
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 65/133 (48%), Gaps = 20/133 (15%)
Query: 497 YNVAMKVA--NLKQKEAS-RSFAAEFNALRNIRHRNLIKIITICSS----IDFEGF---- 545
YN KVA +LKQ S +F AE N ++ ++H+ L+++ + + I E
Sbjct: 34 YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGS 93
Query: 546 --DFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDV 603
DF +G L++ + +++A +A + ++ + +H DL+ +NIL+ +
Sbjct: 94 LVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTL 146
Query: 604 VTHVGDLGLAKFL 616
+ D GLA+ +
Sbjct: 147 SCKIADFGLARLI 159
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 67/156 (42%), Gaps = 23/156 (14%)
Query: 477 KATNNFSPANKIREGGFNIVYNVAMKVANLKQKEASRSFAAEFNALRNIR---------H 527
K N P +G Y+ ++ N+ K+ SR F + +A R R H
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILE-RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 528 RNLIKIITICS-SIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYL------- 579
+N+I ++ + + E F I + L + +L Q + + +D + YL
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIV---MELMDANLCQVIQMELDHE-RMSYLLYQMLCG 138
Query: 580 -RHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
+H I+H DLKPSNI++ D + D GLA+
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 60/145 (41%), Gaps = 20/145 (13%)
Query: 511 ASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLRLCNLSLTQR----- 565
+ F E + + H L+++ +C F+ + +G L + TQR
Sbjct: 48 SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLS--DYLRTQRGLFAA 105
Query: 566 ---VNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPG 622
+ + +DV + YL C ++H DL N L+ ++ V V D G+ +F+
Sbjct: 106 ETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD---- 158
Query: 623 TTAETASSSIGINGTVGYVAPVIIA 647
+ +SS G V + +P + +
Sbjct: 159 ---DQYTSSTGTKFPVKWASPEVFS 180
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 67/156 (42%), Gaps = 23/156 (14%)
Query: 477 KATNNFSPANKIREGGFNIVYNVAMKVANLKQKEASRSFAAEFNALRNIR---------H 527
K N P +G Y+ ++ N+ K+ SR F + +A R R H
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILE-RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 528 RNLIKIITICS-SIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYL------- 579
+N+I ++ + + E F I + L + +L Q + + +D + YL
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIV---MELMDANLCQVIQMELDHE-RMSYLLYQMLCG 138
Query: 580 -RHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
+H I+H DLKPSNI++ D + D GLA+
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 60/145 (41%), Gaps = 20/145 (13%)
Query: 511 ASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLRLCNLSLTQR----- 565
+ F E + + H L+++ +C F+ + +G L + TQR
Sbjct: 43 SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLS--DYLRTQRGLFAA 100
Query: 566 ---VNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPG 622
+ + +DV + YL C ++H DL N L+ ++ V V D G+ +F+
Sbjct: 101 ETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD---- 153
Query: 623 TTAETASSSIGINGTVGYVAPVIIA 647
+ +SS G V + +P + +
Sbjct: 154 ---DQYTSSTGTKFPVKWASPEVFS 175
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 14/94 (14%)
Query: 556 RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615
R+ S A + EYL H +++ DLKP N+++DQ V D GLAK
Sbjct: 134 RIGRFSEPHARFYAAQIVLTFEYL-HSL--DLIYRDLKPENLMIDQQGYIQVTDFGLAKR 190
Query: 616 LYGYEPGTTAETASSSIGINGTVGYVAPVIIAAR 649
+ G + + GT Y+AP II ++
Sbjct: 191 VKG-----------RTWXLCGTPEYLAPEIILSK 213
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 67/156 (42%), Gaps = 23/156 (14%)
Query: 477 KATNNFSPANKIREGGFNIVYNVAMKVANLKQKEASRSFAAEFNALRNIR---------H 527
K N P +G Y+ ++ N+ K+ SR F + +A R R H
Sbjct: 25 KRYQNLKPIGSGAQGIVCAAYDAILE-RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 83
Query: 528 RNLIKIITICS-SIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYL------- 579
+N+I ++ + + E F I + L + +L Q + + +D + YL
Sbjct: 84 KNIIGLLNVFTPQKSLEEFQDVYIV---MELMDANLCQVIQMELDHE-RMSYLLYQMLCG 139
Query: 580 -RHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
+H I+H DLKPSNI++ D + D GLA+
Sbjct: 140 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 175
>pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex
Length = 461
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 100/213 (46%), Gaps = 38/213 (17%)
Query: 127 NASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLE 186
N ++LE ++ S N+ S +SV ++L NL L T N++ I L + L+
Sbjct: 170 NLTTLERLDISSNKVSD-ISV-LAKLTNLESL--------IATNNQISDITPLGILTNLD 219
Query: 187 RLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIG 246
L N N + + ++A+L++ + + + +N+IS+ P + L L L + ++Q I
Sbjct: 220 ELSLNGNQLKDI--GTLASLTN-LTDLDLANNQISNLAP--LSGLTKLTELKLGANQ-IS 273
Query: 247 TIPPLIGETPNLQLLNIGGNHLQG-SILSSLGNLTLQTYLFNNLQGNIP----------- 294
I PL G T L L + N L+ S +S+L NLT T FNN+ P
Sbjct: 274 NISPLAGLTA-LTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLF 332
Query: 295 ---------SSLANCKSLLGLSVSHNKLTSTLP 318
SSLAN ++ LS HN+++ P
Sbjct: 333 FYNNKVSDVSSLANLTNINWLSAGHNQISDLTP 365
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 77/188 (40%), Gaps = 32/188 (17%)
Query: 477 KATNNFSPANKIREGGFNIVYNVAMKVANLKQKEASRSFAAEFNALRNIR---------H 527
K N P +G Y+ ++ N+ K+ SR F + +A R R H
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILE-RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 528 RNLIKIITICS-SIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYL------- 579
+N+I ++ + + E F I + L + +L Q + + +D + YL
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIV---MELMDANLCQVIQMELDHE-RMSYLLYQMLCG 138
Query: 580 -RHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTV 638
+H I+H DLKPSNI++ D + D GLA+ TA T+ T
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---------TAGTSFMMTPYVVTR 189
Query: 639 GYVAPVII 646
Y AP +I
Sbjct: 190 YYRAPEVI 197
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 65/133 (48%), Gaps = 20/133 (15%)
Query: 497 YNVAMKVA--NLKQKEAS-RSFAAEFNALRNIRHRNLIKIITICSS----IDFEGF---- 545
YN KVA +LKQ S +F AE N ++ ++H+ L+++ + + I E
Sbjct: 40 YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGS 99
Query: 546 --DFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDV 603
DF +G L++ + +++A +A + ++ + +H DL+ +NIL+ +
Sbjct: 100 LVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTL 152
Query: 604 VTHVGDLGLAKFL 616
+ D GLA+ +
Sbjct: 153 SCKIADFGLARLI 165
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 65/133 (48%), Gaps = 20/133 (15%)
Query: 497 YNVAMKVA--NLKQKEAS-RSFAAEFNALRNIRHRNLIKIITICSS----IDFEGF---- 545
YN KVA +LKQ S +F AE N ++ ++H+ L+++ + + I E
Sbjct: 39 YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGS 98
Query: 546 --DFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDV 603
DF +G L++ + +++A +A + ++ + +H DL+ +NIL+ +
Sbjct: 99 LVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTL 151
Query: 604 VTHVGDLGLAKFL 616
+ D GLA+ +
Sbjct: 152 SCKIADFGLARLI 164
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 66/150 (44%), Gaps = 30/150 (20%)
Query: 509 KEASRSFAAEFNALRNIR-HRNLIKIITICSSIDFEGFDFKAISNGQLRLCNLSLTQRVN 567
+E + E + LR + H N+I++ + F F + G+L LT++V
Sbjct: 51 QELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGEL---FDYLTEKVT 107
Query: 568 IA-----------IDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFL 616
++ ++V A+ L +IVH DLKP NILLD D+ + D G + L
Sbjct: 108 LSEKETRKIMRALLEVICALHKL------NIVHRDLKPENILLDDDMNIKLTDFGFSCQL 161
Query: 617 YGYEPGTTAETASSSIGINGTVGYVAPVII 646
+PG + GT Y+AP II
Sbjct: 162 ---DPGEKLRE------VCGTPSYLAPEII 182
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 77/188 (40%), Gaps = 32/188 (17%)
Query: 477 KATNNFSPANKIREGGFNIVYNVAMKVANLKQKEASRSFAAEFNALRNIR---------H 527
K N P +G Y+ ++ N+ K+ SR F + +A R R H
Sbjct: 18 KRYQNLKPIGSGAQGIVCAAYDAILE-RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 76
Query: 528 RNLIKIITICS-SIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYL------- 579
+N+I ++ + + E F I + L + +L Q + + +D + YL
Sbjct: 77 KNIIGLLNVFTPQKSLEEFQDVYIV---MELMDANLCQVIQMELDHE-RMSYLLYQMLCG 132
Query: 580 -RHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTV 638
+H I+H DLKPSNI++ D + D GLA+ TA T+ T
Sbjct: 133 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---------TAGTSFMMTPYVVTR 183
Query: 639 GYVAPVII 646
Y AP +I
Sbjct: 184 YYRAPEVI 191
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 65/133 (48%), Gaps = 20/133 (15%)
Query: 497 YNVAMKVA--NLKQKEAS-RSFAAEFNALRNIRHRNLIKIITICSS----IDFEGF---- 545
YN KVA +LKQ S +F AE N ++ ++H+ L+++ + + I E
Sbjct: 35 YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGS 94
Query: 546 --DFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDV 603
DF +G L++ + +++A +A + ++ + +H DL+ +NIL+ +
Sbjct: 95 LVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTL 147
Query: 604 VTHVGDLGLAKFL 616
+ D GLA+ +
Sbjct: 148 SCKIADFGLARLI 160
>pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex
pdb|2OMW|A Chain A, Crystal Structure Of Inla S192n Y369s/mec1 Complex
Length = 461
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 100/213 (46%), Gaps = 38/213 (17%)
Query: 127 NASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLE 186
N ++LE ++ S N+ S +SV ++L NL L T N++ I L + L+
Sbjct: 170 NLTTLERLDISSNKVSD-ISV-LAKLTNLESL--------IATNNQISDITPLGILTNLD 219
Query: 187 RLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIG 246
L N N + + ++A+L++ + + + +N+IS+ P + L L L + ++Q I
Sbjct: 220 ELSLNGNQLKDI--GTLASLTN-LTDLDLANNQISNLAP--LSGLTKLTELKLGANQ-IS 273
Query: 247 TIPPLIGETPNLQLLNIGGNHLQG-SILSSLGNLTLQTYLFNNLQGNIP----------- 294
I PL G T L L + N L+ S +S+L NLT T FNN+ P
Sbjct: 274 NISPLAGLTA-LTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLF 332
Query: 295 ---------SSLANCKSLLGLSVSHNKLTSTLP 318
SSLAN ++ LS HN+++ P
Sbjct: 333 FSNNKVSDVSSLANLTNINWLSAGHNQISDLTP 365
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 65/133 (48%), Gaps = 20/133 (15%)
Query: 497 YNVAMKVA--NLKQKEAS-RSFAAEFNALRNIRHRNLIKIITICSS----IDFEGF---- 545
YN KVA +LKQ S +F AE N ++ ++H+ L+++ + + I E
Sbjct: 36 YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGS 95
Query: 546 --DFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDV 603
DF +G L++ + +++A +A + ++ + +H DL+ +NIL+ +
Sbjct: 96 LVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTL 148
Query: 604 VTHVGDLGLAKFL 616
+ D GLA+ +
Sbjct: 149 SCKIADFGLARLI 161
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 22/145 (15%)
Query: 518 EFNALRNIRHRNLIKIITICSSI--DFEGFDFKAISNGQLR----LCNLSLTQRVNIAID 571
E L+ + H N++K++ + D F+ ++ G + L LS Q D
Sbjct: 86 EIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQD 145
Query: 572 VAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSS 631
+ IEYL + I+H D+KPSN+L+ +D G + +A F G + E S
Sbjct: 146 LIKGIEYLHYQ---KIIHRDIKPSNLLVGED-----GHIKIADF------GVSNEFKGSD 191
Query: 632 IGINGTVGYVAPVIIAARNLENREK 656
++ TVG P +A +L K
Sbjct: 192 ALLSNTVG--TPAFMAPESLSETRK 214
>pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 100/213 (46%), Gaps = 38/213 (17%)
Query: 127 NASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLE 186
N ++LE ++ S N+ S +SV ++L NL L T N++ I L + L+
Sbjct: 171 NLTTLERLDISSNKVSD-ISV-LAKLTNLESL--------IATNNQISDITPLGILTNLD 220
Query: 187 RLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIG 246
L N N + + ++A+L++ + + + +N+IS+ P + L L L + ++Q I
Sbjct: 221 ELSLNGNQLKDI--GTLASLTN-LTDLDLANNQISNLAP--LSGLTKLTELKLGANQ-IS 274
Query: 247 TIPPLIGETPNLQLLNIGGNHLQG-SILSSLGNLTLQTYLFNNLQGNIP----------- 294
I PL G T L L + N L+ S +S+L NLT T FNN+ P
Sbjct: 275 NISPLAGLTA-LTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLF 333
Query: 295 ---------SSLANCKSLLGLSVSHNKLTSTLP 318
SSLAN ++ LS HN+++ P
Sbjct: 334 FYNNKVSDVSSLANLTNINWLSAGHNQISDLTP 366
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 14/94 (14%)
Query: 556 RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615
R+ S A + EYL H +++ DLKP N+L+DQ V D G AK
Sbjct: 155 RIGRFSEPHARFYAAQIVLTFEYL-HSL--DLIYRDLKPENLLIDQQGYIQVTDFGFAKR 211
Query: 616 LYGYEPGTTAETASSSIGINGTVGYVAPVIIAAR 649
+ G ++ + GT Y+AP II ++
Sbjct: 212 VKG-----------ATWTLCGTPEYLAPEIILSK 234
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 10/76 (13%)
Query: 571 DVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASS 630
++ A++YL H + ++V+ DLK N++LD+D + D GL K G + G T +T
Sbjct: 259 EIVSALDYL--HSEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKT--- 311
Query: 631 SIGINGTVGYVAPVII 646
GT Y+AP ++
Sbjct: 312 ---FCGTPEYLAPEVL 324
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/187 (20%), Positives = 77/187 (41%), Gaps = 25/187 (13%)
Query: 476 SKATNNFSPANKIREGGFNIVYNVAMKVANLK--------QKEASRSFAA---EFNALRN 524
+K ++N+ ++ +G F++V K L+ +K ++R F E R
Sbjct: 2 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRK 61
Query: 525 IRHRNLIKIITICSSIDFEGFDFKAISNGQL--RLCNLSLTQRVNIAIDVAFAIEYLRHH 582
++H N++++ F F ++ G+L + + + + +E + +
Sbjct: 62 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYC 121
Query: 583 CQPSIVHGDLKPSNILL---DQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVG 639
IVH +LKP N+LL + + D GLA + + G GT G
Sbjct: 122 HSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA---------IEVNDSEAWHGFAGTPG 172
Query: 640 YVAPVII 646
Y++P ++
Sbjct: 173 YLSPEVL 179
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 76/190 (40%), Gaps = 44/190 (23%)
Query: 481 NFSPANKIREGGFNIVYNVA------------MKVANLKQKEASRSFAAEFNALRNIRHR 528
NF KI G F+ VY A +++ +L +A E + L+ + H
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 529 NLIK-------------IITICSSIDFEGF--DFKAISNGQLRLCNLSLTQRVNIAIDVA 573
N+IK ++ + + D FK Q RL + + + A
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKK----QKRLIPERTVWKYFVQLCSA 148
Query: 574 FAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIG 633
L H ++H D+KP+N+ + V +GDLGL +F ++ TA+ S+
Sbjct: 149 -----LEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFF------SSKTTAAHSLV 197
Query: 634 INGTVGYVAP 643
GT Y++P
Sbjct: 198 --GTPYYMSP 205
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 65/133 (48%), Gaps = 20/133 (15%)
Query: 497 YNVAMKVA--NLKQKEAS-RSFAAEFNALRNIRHRNLIKIITICSS----IDFEGF---- 545
YN KVA +LKQ S +F AE N ++ ++H+ L+++ + + I E
Sbjct: 34 YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGS 93
Query: 546 --DFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDV 603
DF +G L++ + +++A +A + ++ + +H DL+ +NIL+ +
Sbjct: 94 LVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTL 146
Query: 604 VTHVGDLGLAKFL 616
+ D GLA+ +
Sbjct: 147 SCKIADFGLARLI 159
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 14/94 (14%)
Query: 556 RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615
R+ S A + EYL H +++ DLKP N+L+DQ V D G AK
Sbjct: 135 RIGRFSEPHARFYAAQIVLTFEYL-HSL--DLIYRDLKPENLLIDQQGYIKVADFGFAKR 191
Query: 616 LYGYEPGTTAETASSSIGINGTVGYVAPVIIAAR 649
+ G + + GT Y+AP II ++
Sbjct: 192 VKG-----------RTWXLCGTPEYLAPEIILSK 214
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 65/133 (48%), Gaps = 20/133 (15%)
Query: 497 YNVAMKVA--NLKQKEAS-RSFAAEFNALRNIRHRNLIKIITICSS----IDFEGF---- 545
YN KVA +LKQ S +F AE N ++ ++H+ L+++ + + I E
Sbjct: 34 YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGS 93
Query: 546 --DFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDV 603
DF +G L++ + +++A +A + ++ + +H DL+ +NIL+ +
Sbjct: 94 LVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTL 146
Query: 604 VTHVGDLGLAKFL 616
+ D GLA+ +
Sbjct: 147 SCKIADFGLARLI 159
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 10/76 (13%)
Query: 571 DVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASS 630
++ A++YL H + ++V+ DLK N++LD+D + D GL K G + G T +T
Sbjct: 256 EIVSALDYL--HSEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKT--- 308
Query: 631 SIGINGTVGYVAPVII 646
GT Y+AP ++
Sbjct: 309 ---FCGTPEYLAPEVL 321
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 65/163 (39%), Gaps = 17/163 (10%)
Query: 498 NVAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQ 554
+V + + LK + R F +E + + H N+I++ + + + + NG
Sbjct: 77 DVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGS 136
Query: 555 LRL------CNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVG 608
L ++ Q V + V + YL VH DL N+L+D ++V V
Sbjct: 137 LDTFLRTHDGQFTIMQLVGMLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVS 193
Query: 609 DLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNL 651
D GL++ L +P T I I + AP IA R
Sbjct: 194 DFGLSRVLED-DPDAAXTTTGGKIPIR----WTAPEAIAFRTF 231
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/187 (20%), Positives = 77/187 (41%), Gaps = 25/187 (13%)
Query: 476 SKATNNFSPANKIREGGFNIVYNVAMKVANLK--------QKEASRSFAA---EFNALRN 524
+K ++N+ ++ +G F++V K L+ +K ++R F E R
Sbjct: 1 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRK 60
Query: 525 IRHRNLIKIITICSSIDFEGFDFKAISNGQL--RLCNLSLTQRVNIAIDVAFAIEYLRHH 582
++H N++++ F F ++ G+L + + + + +E + +
Sbjct: 61 LQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYC 120
Query: 583 CQPSIVHGDLKPSNILL---DQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVG 639
IVH +LKP N+LL + + D GLA + + G GT G
Sbjct: 121 HSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA---------IEVNDSEAWHGFAGTPG 171
Query: 640 YVAPVII 646
Y++P ++
Sbjct: 172 YLSPEVL 178
>pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex
Length = 466
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 100/213 (46%), Gaps = 38/213 (17%)
Query: 127 NASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLE 186
N ++LE ++ S N+ S +SV ++L NL L T N++ I L + L+
Sbjct: 174 NLTTLERLDISSNKVSD-ISV-LAKLTNLESL--------IATNNQISDITPLGILTNLD 223
Query: 187 RLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIG 246
L N N + + ++A+L++ + + + +N+IS+ P + L L L + ++Q I
Sbjct: 224 ELSLNGNQLKDI--GTLASLTN-LTDLDLANNQISNLAP--LSGLTKLTELKLGANQ-IS 277
Query: 247 TIPPLIGETPNLQLLNIGGNHLQG-SILSSLGNLTLQTYLFNNLQGNIP----------- 294
I PL G T L L + N L+ S +S+L NLT T FNN+ P
Sbjct: 278 NISPLAGLTA-LTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLF 336
Query: 295 ---------SSLANCKSLLGLSVSHNKLTSTLP 318
SSLAN ++ LS HN+++ P
Sbjct: 337 FANNKVSDVSSLANLTNINWLSAGHNQISDLTP 369
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 51/126 (40%), Gaps = 18/126 (14%)
Query: 501 MKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEG----------FDFKAI 550
+K L Q EA F E NA+ ++ HRNLI++ + + + D
Sbjct: 48 LKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRK 107
Query: 551 SNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDL 610
G L LS A+ VA + YL +H DL N+LL + +GD
Sbjct: 108 HQGHFLLGTLS-----RYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDF 159
Query: 611 GLAKFL 616
GL + L
Sbjct: 160 GLMRAL 165
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 51/126 (40%), Gaps = 18/126 (14%)
Query: 501 MKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEG----------FDFKAI 550
+K L Q EA F E NA+ ++ HRNLI++ + + + D
Sbjct: 54 LKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRK 113
Query: 551 SNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDL 610
G L LS A+ VA + YL +H DL N+LL + +GD
Sbjct: 114 HQGHFLLGTLS-----RYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDF 165
Query: 611 GLAKFL 616
GL + L
Sbjct: 166 GLMRAL 171
>pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 100/213 (46%), Gaps = 38/213 (17%)
Query: 127 NASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLE 186
N ++LE ++ S N+ S +SV ++L NL L T N++ I L + L+
Sbjct: 171 NLTTLERLDISSNKVSD-ISV-LAKLTNLESL--------IATNNQISDITPLGILTNLD 220
Query: 187 RLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIG 246
L N N + + ++A+L++ + + + +N+IS+ P + L L L + ++Q I
Sbjct: 221 ELSLNGNQLKDI--GTLASLTN-LTDLDLANNQISNLAP--LSGLTKLTELKLGANQ-IS 274
Query: 247 TIPPLIGETPNLQLLNIGGNHLQG-SILSSLGNLTLQTYLFNNLQGNIP----------- 294
I PL G T L L + N L+ S +S+L NLT T FNN+ P
Sbjct: 275 NISPLAGLTA-LTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLF 333
Query: 295 ---------SSLANCKSLLGLSVSHNKLTSTLP 318
SSLAN ++ LS HN+++ P
Sbjct: 334 FSNNKVSDVSSLANLTNINWLSAGHNQISDLTP 366
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 65/133 (48%), Gaps = 20/133 (15%)
Query: 497 YNVAMKVA--NLKQKEAS-RSFAAEFNALRNIRHRNLIKIITICSS----IDFEGF---- 545
YN KVA +LKQ S +F AE N ++ ++H+ L+++ + + I E
Sbjct: 29 YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGS 88
Query: 546 --DFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDV 603
DF +G L++ + +++A +A + ++ + +H DL+ +NIL+ +
Sbjct: 89 LVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTL 141
Query: 604 VTHVGDLGLAKFL 616
+ D GLA+ +
Sbjct: 142 SCKIADFGLARLI 154
>pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 100/213 (46%), Gaps = 38/213 (17%)
Query: 127 NASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLE 186
N ++LE ++ S N+ S +SV ++L NL L T N++ I L + L+
Sbjct: 171 NLTTLERLDISSNKVSD-ISV-LAKLTNLESL--------IATNNQISDITPLGILTNLD 220
Query: 187 RLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIG 246
L N N + + ++A+L++ + + + +N+IS+ P + L L L + ++Q I
Sbjct: 221 ELSLNGNQLKDI--GTLASLTN-LTDLDLANNQISNLAP--LSGLTKLTELKLGANQ-IS 274
Query: 247 TIPPLIGETPNLQLLNIGGNHLQG-SILSSLGNLTLQTYLFNNLQGNIP----------- 294
I PL G T L L + N L+ S +S+L NLT T FNN+ P
Sbjct: 275 NISPLAGLTA-LTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLF 333
Query: 295 ---------SSLANCKSLLGLSVSHNKLTSTLP 318
SSLAN ++ LS HN+++ P
Sbjct: 334 FYNNKVSDVSSLANLTNINWLSAGHNQISDLTP 366
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 51/126 (40%), Gaps = 18/126 (14%)
Query: 501 MKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEG----------FDFKAI 550
+K L Q EA F E NA+ ++ HRNLI++ + + + D
Sbjct: 54 LKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRK 113
Query: 551 SNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDL 610
G L LS A+ VA + YL +H DL N+LL + +GD
Sbjct: 114 HQGHFLLGTLS-----RYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDF 165
Query: 611 GLAKFL 616
GL + L
Sbjct: 166 GLMRAL 171
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 67/156 (42%), Gaps = 23/156 (14%)
Query: 477 KATNNFSPANKIREGGFNIVYNVAMKVANLKQKEASRSFAAEFNALRNIR---------H 527
K N P +G Y+ ++ N+ K+ SR F + +A R R H
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILE-RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 528 RNLIKIITICS-SIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYL------- 579
+N+I ++ + + E F I + L + +L Q + + +D + YL
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIV---MELMDANLCQVIQMELDHE-RMSYLLYQMLCG 138
Query: 580 -RHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
+H I+H DLKPSNI++ D + D GLA+
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 51/126 (40%), Gaps = 18/126 (14%)
Query: 501 MKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEG----------FDFKAI 550
+K L Q EA F E NA+ ++ HRNLI++ + + + D
Sbjct: 48 LKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRK 107
Query: 551 SNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDL 610
G L LS A+ VA + YL +H DL N+LL + +GD
Sbjct: 108 HQGHFLLGTLS-----RYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDF 159
Query: 611 GLAKFL 616
GL + L
Sbjct: 160 GLMRAL 165
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 67/156 (42%), Gaps = 23/156 (14%)
Query: 477 KATNNFSPANKIREGGFNIVYNVAMKVANLKQKEASRSFAAEFNALRNIR---------H 527
K N P +G Y+ ++ N+ K+ SR F + +A R R H
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAILE-RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 528 RNLIKIITICS-SIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYL------- 579
+N+I ++ + + E F I + L + +L Q + + +D + YL
Sbjct: 83 KNIIGLLNVFTPQKSLEEFQDVYIV---MELMDANLCQVIQMELDHE-RMSYLLYQMLCG 138
Query: 580 -RHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
+H I+H DLKPSNI++ D + D GLA+
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 40/94 (42%), Gaps = 14/94 (14%)
Query: 556 RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615
R+ S A + EYL +++ DLKP N+L+DQ V D G AK
Sbjct: 134 RIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAKR 190
Query: 616 LYGYEPGTTAETASSSIGINGTVGYVAPVIIAAR 649
+ G + + GT Y+AP II ++
Sbjct: 191 VKG-----------RTWXLCGTPEYLAPEIILSK 213
>pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human)
Recognition Complex
pdb|1O6T|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|B Chain B, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
Length = 466
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 100/213 (46%), Gaps = 38/213 (17%)
Query: 127 NASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLE 186
N ++LE ++ S N+ S +SV ++L NL L T N++ I L + L+
Sbjct: 175 NLTTLERLDISSNKVSD-ISV-LAKLTNLESL--------IATNNQISDITPLGILTNLD 224
Query: 187 RLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIG 246
L N N + + ++A+L++ + + + +N+IS+ P + L L L + ++Q I
Sbjct: 225 ELSLNGNQLKDI--GTLASLTN-LTDLDLANNQISNLAP--LSGLTKLTELKLGANQ-IS 278
Query: 247 TIPPLIGETPNLQLLNIGGNHLQG-SILSSLGNLTLQTYLFNNLQGNIP----------- 294
I PL G T L L + N L+ S +S+L NLT T FNN+ P
Sbjct: 279 NISPLAGLTA-LTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLF 337
Query: 295 ---------SSLANCKSLLGLSVSHNKLTSTLP 318
SSLAN ++ LS HN+++ P
Sbjct: 338 FYNNKVSDVSSLANLTNINWLSAGHNQISDLTP 370
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 51/126 (40%), Gaps = 18/126 (14%)
Query: 501 MKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEG----------FDFKAI 550
+K L Q EA F E NA+ ++ HRNLI++ + + + D
Sbjct: 44 LKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRK 103
Query: 551 SNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDL 610
G L LS A+ VA + YL +H DL N+LL + +GD
Sbjct: 104 HQGHFLLGTLS-----RYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDF 155
Query: 611 GLAKFL 616
GL + L
Sbjct: 156 GLMRAL 161
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 14/94 (14%)
Query: 556 RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615
R+ S A + EYL H +++ DLKP N+L+DQ V D G AK
Sbjct: 134 RIGRFSEPHARFYAAQIVLTFEYL-HSL--DLIYRDLKPENLLIDQQGYIKVADFGFAKR 190
Query: 616 LYGYEPGTTAETASSSIGINGTVGYVAPVIIAAR 649
+ G + + GT Y+AP II ++
Sbjct: 191 VKG-----------RTWXLCGTPEYLAPEIILSK 213
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 14/94 (14%)
Query: 556 RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615
R+ S A + EYL H +++ DLKP N+L+DQ V D G AK
Sbjct: 134 RIGRFSEPHARFYAAQIVLTFEYL-HSL--DLIYRDLKPENLLIDQQGYIKVADFGFAKR 190
Query: 616 LYGYEPGTTAETASSSIGINGTVGYVAPVIIAAR 649
+ G + + GT Y+AP II ++
Sbjct: 191 VKG-----------RTWXLCGTPEYLAPEIILSK 213
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 60/137 (43%), Gaps = 9/137 (6%)
Query: 518 EFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNG--QLRLCNLSLTQRVNIAIDVAFA 575
E L++ +H N+I I I FE F+ I Q L + TQ ++ F
Sbjct: 59 EIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFI 118
Query: 576 IEYLRH----HCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSS 631
+ LR H +++H DLKPSN+L++ + V D GLA+ + + T S
Sbjct: 119 YQTLRAVKVLHGS-NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQS 177
Query: 632 --IGINGTVGYVAPVII 646
+ T Y AP ++
Sbjct: 178 GMVEFVATRWYRAPEVM 194
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 66/150 (44%), Gaps = 30/150 (20%)
Query: 509 KEASRSFAAEFNALRNIR-HRNLIKIITICSSIDFEGFDFKAISNGQLRLCNLSLTQRVN 567
+E + E + LR + H N+I++ + F F + G+L LT++V
Sbjct: 64 QELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGEL---FDYLTEKVT 120
Query: 568 IA-----------IDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFL 616
++ ++V A+ L +IVH DLKP NILLD D+ + D G + L
Sbjct: 121 LSEKETRKIMRALLEVICALHKL------NIVHRDLKPENILLDDDMNIKLTDFGFSCQL 174
Query: 617 YGYEPGTTAETASSSIGINGTVGYVAPVII 646
+PG + GT Y+AP II
Sbjct: 175 ---DPGEKLRE------VCGTPSYLAPEII 195
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 51/126 (40%), Gaps = 18/126 (14%)
Query: 501 MKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEG----------FDFKAI 550
+K L Q EA F E NA+ ++ HRNLI++ + + + D
Sbjct: 44 LKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRK 103
Query: 551 SNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDL 610
G L LS A+ VA + YL +H DL N+LL + +GD
Sbjct: 104 HQGHFLLGTLS-----RYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDF 155
Query: 611 GLAKFL 616
GL + L
Sbjct: 156 GLMRAL 161
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 51/126 (40%), Gaps = 18/126 (14%)
Query: 501 MKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEG----------FDFKAI 550
+K L Q EA F E NA+ ++ HRNLI++ + + + D
Sbjct: 44 LKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKMVTELAPLGSLLDRLRK 103
Query: 551 SNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDL 610
G L LS A+ VA + YL +H DL N+LL + +GD
Sbjct: 104 HQGHFLLGTLS-----RYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDF 155
Query: 611 GLAKFL 616
GL + L
Sbjct: 156 GLMRAL 161
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 70/157 (44%), Gaps = 24/157 (15%)
Query: 500 AMKV---ANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEG-----FDFKAIS 551
AMKV A LK ++ R+ E + L ++ H ++K+ + EG DF +
Sbjct: 60 AMKVLKKATLKVRDRVRT-KMERDILADVNHPFVVKLHYAFQT---EGKLYLILDF--LR 113
Query: 552 NGQL--RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGD 609
G L RL + ++ +A L H I++ DLKP NILLD++ + D
Sbjct: 114 GGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTD 173
Query: 610 LGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVII 646
GL+K +E + GTV Y+AP ++
Sbjct: 174 FGLSKEAIDHE--------KKAYSFCGTVEYMAPEVV 202
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 14/94 (14%)
Query: 556 RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615
R+ S A + EYL H +++ DLKP N+++DQ V D GLAK
Sbjct: 134 RIGRFSEPHARFYAAQIVLTFEYL-HSL--DLIYRDLKPENLMIDQQGYIKVTDFGLAKR 190
Query: 616 LYGYEPGTTAETASSSIGINGTVGYVAPVIIAAR 649
+ G + + GT Y+AP II ++
Sbjct: 191 VKG-----------RTWXLCGTPEYLAPEIILSK 213
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 14/94 (14%)
Query: 556 RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615
R+ S A + EYL H +++ DLKP N+L+DQ V D G AK
Sbjct: 135 RIGRFSEPHARFYAAQIVLTFEYL-HSL--DLIYRDLKPENLLIDQQGYIQVTDFGFAKR 191
Query: 616 LYGYEPGTTAETASSSIGINGTVGYVAPVIIAAR 649
+ G + + GT Y+AP II ++
Sbjct: 192 VKG-----------RTWXLCGTPEYLAPEIILSK 214
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 66/149 (44%), Gaps = 12/149 (8%)
Query: 509 KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLRLC------NLSL 562
++ R F +E + + H N+I + + + + + NG L ++
Sbjct: 49 EKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTV 108
Query: 563 TQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPG 622
Q V + +A ++YL + VH L NIL++ ++V V D GL++FL E
Sbjct: 109 IQLVGMLRGIAAGMKYL---ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFL---EDD 162
Query: 623 TTAETASSSIGINGTVGYVAPVIIAARNL 651
T+ T +S++G + + AP I R
Sbjct: 163 TSDPTYTSALGGKIPIRWTAPEAIQYRKF 191
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 14/94 (14%)
Query: 556 RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615
R+ S A + EYL H +++ DLKP N+L+DQ V D G AK
Sbjct: 134 RIGRFSEPHARFYAAQIVLTFEYL-HSL--DLIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 616 LYGYEPGTTAETASSSIGINGTVGYVAPVIIAAR 649
+ G + + GT Y+AP II ++
Sbjct: 191 VKG-----------RTWXLCGTPEYLAPEIILSK 213
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 14/94 (14%)
Query: 556 RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615
R+ S A + EYL H +++ DLKP N+L+DQ V D G AK
Sbjct: 135 RIGRFSEPHARFYAAQIVLTFEYL-HSL--DLIYRDLKPENLLIDQQGYIQVTDFGFAKR 191
Query: 616 LYGYEPGTTAETASSSIGINGTVGYVAPVIIAAR 649
+ G + + GT Y+AP II ++
Sbjct: 192 VKG-----------RTWXLCGTPEYLAPEIILSK 214
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 14/94 (14%)
Query: 556 RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615
R+ S A + EYL H +++ DLKP N+L+DQ V D G AK
Sbjct: 134 RIGRFSEPHARFYAAQIVLTFEYL-HSL--DLIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 616 LYGYEPGTTAETASSSIGINGTVGYVAPVIIAAR 649
+ G + + GT Y+AP II ++
Sbjct: 191 VKG-----------RTWXLCGTPEYLAPEIILSK 213
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 14/94 (14%)
Query: 556 RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615
R+ S A + EYL H +++ DLKP N+L+DQ V D G AK
Sbjct: 135 RIGRFSEPHARFYAAQIVLTFEYL-HSL--DLIYRDLKPENLLIDQQGYIQVTDFGFAKR 191
Query: 616 LYGYEPGTTAETASSSIGINGTVGYVAPVIIAAR 649
+ G + + GT Y+AP II ++
Sbjct: 192 VKG-----------RTWTLCGTPEYLAPEIILSK 214
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 14/94 (14%)
Query: 556 RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615
R+ S A + EYL H +++ DLKP N+L+DQ V D G AK
Sbjct: 135 RIGRFSEPHARFYAAQIVLTFEYL-HSL--DLIYRDLKPENLLIDQQGYIQVTDFGFAKR 191
Query: 616 LYGYEPGTTAETASSSIGINGTVGYVAPVIIAAR 649
+ G + + GT Y+AP II ++
Sbjct: 192 VKG-----------RTWXLCGTPEYLAPEIILSK 214
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 14/94 (14%)
Query: 556 RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615
R+ S A + EYL H +++ DLKP N+L+DQ V D G AK
Sbjct: 135 RIGRFSEPHARFYAAQIVLTFEYL-HSL--DLIYRDLKPENLLIDQQGYIQVTDFGFAKR 191
Query: 616 LYGYEPGTTAETASSSIGINGTVGYVAPVIIAAR 649
+ G + + GT Y+AP II ++
Sbjct: 192 VKG-----------RTWXLCGTPEYLAPEIILSK 214
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 14/94 (14%)
Query: 556 RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615
R+ S A + EYL H +++ DLKP N+L+DQ V D G AK
Sbjct: 134 RIGRFSEPHARFYAAQIVLTFEYL-HSL--DLIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 616 LYGYEPGTTAETASSSIGINGTVGYVAPVIIAAR 649
+ G + + GT Y+AP II ++
Sbjct: 191 VKG-----------RTWXLCGTPEYLAPEIILSK 213
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 40/94 (42%), Gaps = 14/94 (14%)
Query: 556 RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615
R+ S A + EYL +++ DLKP N+L+DQ V D G AK
Sbjct: 127 RIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR 183
Query: 616 LYGYEPGTTAETASSSIGINGTVGYVAPVIIAAR 649
+ G + + GT Y+AP II ++
Sbjct: 184 VKG-----------RTWXLCGTPEYLAPEIILSK 206
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 76/188 (40%), Gaps = 32/188 (17%)
Query: 477 KATNNFSPANKIREGGFNIVYNVAMKVANLKQKEASRSFAAEFNALRNIR---------H 527
K N P +G Y+ + N+ K+ SR F + +A R R H
Sbjct: 17 KRYQNLKPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 75
Query: 528 RNLIKIITICS-SIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYL------- 579
+N+I ++ + + E F + + L + +L Q + + +D + YL
Sbjct: 76 KNIISLLNVFTPQKTLEEFQDVYLV---MELMDANLXQVIQMELDHE-RMSYLLYQMLXG 131
Query: 580 -RHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTV 638
+H I+H DLKPSNI++ D + D GLA+ TA T+ T
Sbjct: 132 IKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR---------TAGTSFMMTPYVVTR 182
Query: 639 GYVAPVII 646
Y AP +I
Sbjct: 183 YYRAPEVI 190
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 14/94 (14%)
Query: 556 RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615
R+ S A + EYL H +++ DLKP N+L+DQ V D G AK
Sbjct: 135 RIGRFSEPHARFYAAQIVLTFEYL-HSL--DLIYRDLKPENLLIDQQGYIQVTDFGFAKR 191
Query: 616 LYGYEPGTTAETASSSIGINGTVGYVAPVIIAAR 649
+ G + + GT Y+AP II ++
Sbjct: 192 VKG-----------RTWXLCGTPEYLAPEIILSK 214
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 14/94 (14%)
Query: 556 RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615
R+ S A + EYL H +++ DLKP N+L+DQ V D G AK
Sbjct: 134 RIGRFSEPHARFYAAQIVLTFEYL-HSL--DLIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 616 LYGYEPGTTAETASSSIGINGTVGYVAPVIIAAR 649
+ G + + GT Y+AP II ++
Sbjct: 191 VKG-----------RTWXLCGTPEYLAPEIILSK 213
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 14/94 (14%)
Query: 556 RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615
R+ S A + EYL H +++ DLKP N+L+DQ V D G AK
Sbjct: 134 RIGRFSEPHARFYAAQIVLTFEYL-HSL--DLIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 616 LYGYEPGTTAETASSSIGINGTVGYVAPVIIAAR 649
+ G + + GT Y+AP II ++
Sbjct: 191 VKG-----------RTWXLCGTPEYLAPEIILSK 213
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 14/81 (17%)
Query: 569 AIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETA 628
A + EYL H +++ DLKP N+L+DQ V D G AK + G
Sbjct: 142 AAQIVLTFEYL-HSL--DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG---------- 188
Query: 629 SSSIGINGTVGYVAPVIIAAR 649
+ + GT Y+AP II ++
Sbjct: 189 -RTWXLCGTPEYLAPEIILSK 208
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 14/94 (14%)
Query: 556 RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615
R+ S A + EYL H +++ DLKP N+L+DQ V D G AK
Sbjct: 134 RIGRFSEPHARFYAAQIVLTFEYL-HSL--DLIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 616 LYGYEPGTTAETASSSIGINGTVGYVAPVIIAAR 649
+ G + + GT Y+AP II ++
Sbjct: 191 VKG-----------RTWXLCGTPEYLAPEIILSK 213
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 14/94 (14%)
Query: 556 RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615
R+ S A + EYL H +++ DLKP N+L+DQ V D G AK
Sbjct: 134 RIGRFSEPHARFYAAQIVLTFEYL-HSL--DLIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 616 LYGYEPGTTAETASSSIGINGTVGYVAPVIIAAR 649
+ G + + GT Y+AP II ++
Sbjct: 191 VKG-----------RTWXLCGTPEYLAPEIILSK 213
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 77/189 (40%), Gaps = 34/189 (17%)
Query: 477 KATNNFSPANKIREGGFNIVYNVAMKVANLKQKEASRSFAAEFNALRNIR---------H 527
K N P +G Y+ + N+ K+ SR F + +A R R H
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNH 82
Query: 528 RNLIKIITICS-SIDFEGF-DFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYL------ 579
+N+I ++ + + E F D + + L + +L Q + + +D + YL
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLV----MELMDANLXQVIQMELDHE-RMSYLLYQMLX 137
Query: 580 --RHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGT 637
+H I+H DLKPSNI++ D + D GLA+ TA T+ T
Sbjct: 138 GIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR---------TAGTSFMMTPYVVT 188
Query: 638 VGYVAPVII 646
Y AP +I
Sbjct: 189 RYYRAPEVI 197
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 559 NLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617
NL L V +D+A +EYL + +H DL N +L +D+ V D GL++ +Y
Sbjct: 133 NLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADFGLSRKIY 188
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 14/94 (14%)
Query: 556 RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615
R+ S A + EYL H +++ DLKP N+L+DQ V D G AK
Sbjct: 134 RIGRFSEPHARFYAAQIVLTFEYL-HSL--DLIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 616 LYGYEPGTTAETASSSIGINGTVGYVAPVIIAAR 649
+ G + + GT Y+AP II ++
Sbjct: 191 VKG-----------RTWXLCGTPEYLAPEIILSK 213
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 14/94 (14%)
Query: 556 RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615
R+ S A + EYL H +++ DLKP N+L+DQ V D G AK
Sbjct: 134 RIGRFSEPHARFYAAQIVLTFEYL-HSL--DLIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 616 LYGYEPGTTAETASSSIGINGTVGYVAPVIIAAR 649
+ G + + GT Y+AP II ++
Sbjct: 191 VKG-----------RTWXLCGTPEYLAPEIILSK 213
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 14/81 (17%)
Query: 569 AIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETA 628
A + EYL +++ DLKP N+L+DQ V D G AK + G
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG---------- 193
Query: 629 SSSIGINGTVGYVAPVIIAAR 649
+ + GT Y+AP II ++
Sbjct: 194 -RTWXLCGTPEYLAPEIILSK 213
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 14/94 (14%)
Query: 556 RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615
R+ S A + EYL H +++ DLKP N+L+DQ V D G AK
Sbjct: 134 RIGRFSEPHARFYAAQIVLTFEYL-HSL--DLIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 616 LYGYEPGTTAETASSSIGINGTVGYVAPVIIAAR 649
+ G + + GT Y+AP II ++
Sbjct: 191 VKG-----------RTWXLCGTPEYLAPEIILSK 213
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 37/81 (45%), Gaps = 14/81 (17%)
Query: 569 AIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETA 628
A + EYL +++ DLKP N+L+DQ V D G AK + G
Sbjct: 140 AAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG---------- 186
Query: 629 SSSIGINGTVGYVAPVIIAAR 649
+ + GT Y+AP II ++
Sbjct: 187 -RTWXLCGTPEYLAPEIILSK 206
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 14/94 (14%)
Query: 556 RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615
R+ S A + EYL H +++ DLKP N+L+DQ V D G AK
Sbjct: 134 RIGRFSEPHARFYAAQIVLTFEYL-HSL--DLIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 616 LYGYEPGTTAETASSSIGINGTVGYVAPVIIAAR 649
+ G + + GT Y+AP II ++
Sbjct: 191 VKG-----------RTWXLCGTPEYLAPEIILSK 213
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 65/163 (39%), Gaps = 17/163 (10%)
Query: 498 NVAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQ 554
+V + + LK + R F +E + + H N+I++ + + + + NG
Sbjct: 77 DVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGS 136
Query: 555 LRL------CNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVG 608
L ++ Q V + V + YL VH DL N+L+D ++V V
Sbjct: 137 LDTFLRTHDGQFTIMQLVGMLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVS 193
Query: 609 DLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNL 651
D GL++ L +P T I I + AP IA R
Sbjct: 194 DFGLSRVLED-DPDAAYTTTGGKIPIR----WTAPEAIAFRTF 231
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 14/94 (14%)
Query: 556 RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615
R+ S A + EYL H +++ DLKP N+L+DQ V D G AK
Sbjct: 134 RIGRFSEPHARFYAAQIVLTFEYL-HSL--DLIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 616 LYGYEPGTTAETASSSIGINGTVGYVAPVIIAAR 649
+ G + + GT Y+AP II ++
Sbjct: 191 VKG-----------RTWXLCGTPEYLAPEIILSK 213
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 76/188 (40%), Gaps = 32/188 (17%)
Query: 477 KATNNFSPANKIREGGFNIVYNVAMKVANLKQKEASRSFAAEFNALRNIR---------H 527
K N P +G Y+ + N+ K+ SR F + +A R R H
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 528 RNLIKIITICS-SIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYL------- 579
+N+I ++ + + E F + + L + +L Q + + +D + YL
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLV---MELMDANLXQVIQMELDHE-RMSYLLYQMLXG 138
Query: 580 -RHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTV 638
+H I+H DLKPSNI++ D + D GLA+ TA T+ T
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR---------TAGTSFMMTPYVVTR 189
Query: 639 GYVAPVII 646
Y AP +I
Sbjct: 190 YYRAPEVI 197
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 76/188 (40%), Gaps = 32/188 (17%)
Query: 477 KATNNFSPANKIREGGFNIVYNVAMKVANLKQKEASRSFAAEFNALRNIR---------H 527
K N P +G Y+ + N+ K+ SR F + +A R R H
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNH 82
Query: 528 RNLIKIITICS-SIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYL------- 579
+N+I ++ + + E F + + L + +L Q + + +D + YL
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLV---MELMDANLCQVIQMELDHE-RMSYLLYQMLCG 138
Query: 580 -RHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTV 638
+H I+H DLKPSNI++ D + D GLA+ TA T+ T
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR---------TAGTSFMMTPYVVTR 189
Query: 639 GYVAPVII 646
Y AP +I
Sbjct: 190 YYRAPEVI 197
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 14/81 (17%)
Query: 569 AIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETA 628
A + EYL H +++ DLKP N+L+DQ V D G AK + G
Sbjct: 147 AAQIVLTFEYL-HSL--DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG---------- 193
Query: 629 SSSIGINGTVGYVAPVIIAAR 649
+ + GT Y+AP II ++
Sbjct: 194 -RTWXLCGTPEYLAPEIILSK 213
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 76/188 (40%), Gaps = 32/188 (17%)
Query: 477 KATNNFSPANKIREGGFNIVYNVAMKVANLKQKEASRSFAAEFNALRNIR---------H 527
K N P +G Y+ + N+ K+ SR F + +A R R H
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNH 82
Query: 528 RNLIKIITICS-SIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYL------- 579
+N+I ++ + + E F + + L + +L Q + + +D + YL
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLV---MELMDANLXQVIQMELDHE-RMSYLLYQMLCG 138
Query: 580 -RHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTV 638
+H I+H DLKPSNI++ D + D GLA+ TA T+ T
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR---------TAGTSFMMTPYVVTR 189
Query: 639 GYVAPVII 646
Y AP +I
Sbjct: 190 YYRAPEVI 197
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 14/81 (17%)
Query: 569 AIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETA 628
A + EYL H +++ DLKP N+L+DQ V D G AK + G
Sbjct: 147 AAQIVLTFEYL-HSL--DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG---------- 193
Query: 629 SSSIGINGTVGYVAPVIIAAR 649
+ + GT Y+AP II ++
Sbjct: 194 -RTWXLCGTPEYLAPEIILSK 213
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 41/94 (43%), Gaps = 14/94 (14%)
Query: 556 RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615
R+ S A + EYL H +++ DLKP N+L+DQ V D G AK
Sbjct: 155 RIGRFSEPHARFYAAQIVLTFEYL-HSL--DLIYRDLKPENLLIDQQGYIQVTDFGFAKR 211
Query: 616 LYGYEPGTTAETASSSIGINGTVGYVAPVIIAAR 649
+ G + + GT Y+AP II ++
Sbjct: 212 VKG-----------RTWXLCGTPEYLAPEIILSK 234
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 67/147 (45%), Gaps = 21/147 (14%)
Query: 483 SPANKIREGGFNIVYNVAMKVANLK-----QKEASRSFAAEFNALRNIRHRNLIKIITIC 537
S A I F+ V + + V L Q A R++ E L+ + H+N+I ++ +
Sbjct: 32 SGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYR-ELVLLKCVNHKNIISLLNVF 90
Query: 538 S-SIDFEGF-DFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYL--------RHHCQPSI 587
+ E F D + + L + +L Q +++ +D + YL +H I
Sbjct: 91 TPQKTLEEFQDVYLV----MELMDANLCQVIHMELDHE-RMSYLLYQMLCGIKHLHSAGI 145
Query: 588 VHGDLKPSNILLDQDVVTHVGDLGLAK 614
+H DLKPSNI++ D + D GLA+
Sbjct: 146 IHRDLKPSNIVVKSDCTLKILDFGLAR 172
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 67/147 (45%), Gaps = 21/147 (14%)
Query: 483 SPANKIREGGFNIVYNVAMKVANLK-----QKEASRSFAAEFNALRNIRHRNLIKIITIC 537
S A I F+ V + + V L Q A R++ E L+ + H+N+I ++ +
Sbjct: 34 SGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYR-ELVLLKCVNHKNIISLLNVF 92
Query: 538 S-SIDFEGF-DFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYL--------RHHCQPSI 587
+ E F D + + L + +L Q +++ +D + YL +H I
Sbjct: 93 TPQKTLEEFQDVYLV----MELMDANLCQVIHMELDHE-RMSYLLYQMLCGIKHLHSAGI 147
Query: 588 VHGDLKPSNILLDQDVVTHVGDLGLAK 614
+H DLKPSNI++ D + D GLA+
Sbjct: 148 IHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 14/81 (17%)
Query: 569 AIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETA 628
A + EYL H +++ DLKP N+L+DQ V D G AK + G
Sbjct: 148 AAQIVLTFEYL-HSL--DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG---------- 194
Query: 629 SSSIGINGTVGYVAPVIIAAR 649
+ + GT Y+AP II ++
Sbjct: 195 -RTWXLCGTPEYLAPEIILSK 214
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 14/81 (17%)
Query: 569 AIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETA 628
A + EYL H +++ DLKP N+L+DQ V D G AK + G
Sbjct: 147 AAQIVLTFEYL-HSL--DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG---------- 193
Query: 629 SSSIGINGTVGYVAPVIIAAR 649
+ + GT Y+AP II ++
Sbjct: 194 -RTWXLCGTPEYLAPEIILSK 213
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 14/81 (17%)
Query: 569 AIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETA 628
A + EYL H +++ DLKP N+L+DQ V D G AK + G
Sbjct: 147 AAQIVLTFEYL-HSL--DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG---------- 193
Query: 629 SSSIGINGTVGYVAPVIIAAR 649
+ + GT Y+AP II ++
Sbjct: 194 -RTWXLCGTPEYLAPEIILSK 213
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 76/188 (40%), Gaps = 32/188 (17%)
Query: 477 KATNNFSPANKIREGGFNIVYNVAMKVANLKQKEASRSFAAEFNALRNIR---------H 527
K N P +G Y+ + N+ K+ SR F + +A R R H
Sbjct: 25 KRYQNLKPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 83
Query: 528 RNLIKIITICS-SIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYL------- 579
+N+I ++ + + E F + + L + +L Q + + +D + YL
Sbjct: 84 KNIISLLNVFTPQKTLEEFQDVYLV---MELMDANLCQVIQMELDHE-RMSYLLYQMLCG 139
Query: 580 -RHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTV 638
+H I+H DLKPSNI++ D + D GLA+ TA T+ T
Sbjct: 140 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---------TAGTSFMMTPYVVTR 190
Query: 639 GYVAPVII 646
Y AP +I
Sbjct: 191 YYRAPEVI 198
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 76/188 (40%), Gaps = 32/188 (17%)
Query: 477 KATNNFSPANKIREGGFNIVYNVAMKVANLKQKEASRSFAAEFNALRNIR---------H 527
K N P +G Y+ + N+ K+ SR F + +A R R H
Sbjct: 23 KRYQNLKPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 81
Query: 528 RNLIKIITICS-SIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYL------- 579
+N+I ++ + + E F + + L + +L Q + + +D + YL
Sbjct: 82 KNIISLLNVFTPQKTLEEFQDVYLV---MELMDANLCQVIQMELDHE-RMSYLLYQMLCG 137
Query: 580 -RHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTV 638
+H I+H DLKPSNI++ D + D GLA+ TA T+ T
Sbjct: 138 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---------TAGTSFMMTPYVVTR 188
Query: 639 GYVAPVII 646
Y AP +I
Sbjct: 189 YYRAPEVI 196
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 67/161 (41%), Gaps = 15/161 (9%)
Query: 498 NVAMKVANLKQKEASR-SFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQL- 555
+VA+K + E R F E + + H N+I++ + + + + NG L
Sbjct: 75 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 556 -----RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDL 610
++ Q V + +A ++YL VH DL NIL++ ++V V D
Sbjct: 135 SFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDF 191
Query: 611 GLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNL 651
GLA+ L E A ++ G + + +P IA R
Sbjct: 192 GLARVL-----EDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 76/188 (40%), Gaps = 32/188 (17%)
Query: 477 KATNNFSPANKIREGGFNIVYNVAMKVANLKQKEASRSFAAEFNALRNIR---------H 527
K N P +G Y+ + N+ K+ SR F + +A R R H
Sbjct: 17 KRYQNLKPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 75
Query: 528 RNLIKIITICS-SIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYL------- 579
+N+I ++ + + E F + + L + +L Q + + +D + YL
Sbjct: 76 KNIISLLNVFTPQKTLEEFQDVYLV---MELMDANLCQVIQMELDHE-RMSYLLYQMLCG 131
Query: 580 -RHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTV 638
+H I+H DLKPSNI++ D + D GLA+ TA T+ T
Sbjct: 132 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---------TAGTSFMMTPYVVTR 182
Query: 639 GYVAPVII 646
Y AP +I
Sbjct: 183 YYRAPEVI 190
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 14/81 (17%)
Query: 569 AIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETA 628
A + EYL H +++ DLKP N+L+DQ V D G AK + G
Sbjct: 147 AAQIVLTFEYL-HSL--DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG---------- 193
Query: 629 SSSIGINGTVGYVAPVIIAAR 649
+ + GT Y+AP II ++
Sbjct: 194 -RTWXLCGTPEYLAPEIILSK 213
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 73/177 (41%), Gaps = 24/177 (13%)
Query: 486 NKIREGGFNIV---------YNVAMKVANLKQKEA--SRSFAAEFNALRNIRHRNLIKII 534
++ +G F++V A K+ N K+ A + E R ++H N++++
Sbjct: 28 EELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLH 87
Query: 535 TICSSIDFEGFDFKAISNGQL--RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDL 592
S F ++ G+L + + + + +E + H Q +VH DL
Sbjct: 88 DSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDL 147
Query: 593 KPSNILLD---QDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVII 646
KP N+LL + + D GLA + G + + G GT GY++P ++
Sbjct: 148 KPENLLLASKLKGAAVKLADFGLAIEVEGEQ--------QAWFGFAGTPGYLSPEVL 196
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 40/94 (42%), Gaps = 14/94 (14%)
Query: 556 RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615
R+ S A + EYL +++ DLKP N+L+DQ V D G AK
Sbjct: 134 RIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 616 LYGYEPGTTAETASSSIGINGTVGYVAPVIIAAR 649
+ G + + GT Y+AP II ++
Sbjct: 191 VKG-----------RTWXLCGTPEYLAPEIILSK 213
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 40/94 (42%), Gaps = 14/94 (14%)
Query: 556 RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615
R+ S A + EYL +++ DLKP N+L+DQ V D G AK
Sbjct: 120 RIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKR 176
Query: 616 LYGYEPGTTAETASSSIGINGTVGYVAPVIIAAR 649
+ G + + GT Y+AP II ++
Sbjct: 177 VKG-----------RTWTLCGTPEYLAPEIILSK 199
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 76/188 (40%), Gaps = 32/188 (17%)
Query: 477 KATNNFSPANKIREGGFNIVYNVAMKVANLKQKEASRSFAAEFNALRNIR---------H 527
K N P +G Y+ + N+ K+ SR F + +A R R H
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 528 RNLIKIITICS-SIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYL------- 579
+N+I ++ + + E F + + L + +L Q + + +D + YL
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLV---MELMDANLCQVIQMELDHE-RMSYLLYQMLCG 138
Query: 580 -RHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTV 638
+H I+H DLKPSNI++ D + D GLA+ TA T+ T
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---------TAGTSFMMTPYVVTR 189
Query: 639 GYVAPVII 646
Y AP +I
Sbjct: 190 YYRAPEVI 197
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 76/188 (40%), Gaps = 32/188 (17%)
Query: 477 KATNNFSPANKIREGGFNIVYNVAMKVANLKQKEASRSFAAEFNALRNIR---------H 527
K N P +G Y+ + N+ K+ SR F + +A R R H
Sbjct: 18 KRYQNLKPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 76
Query: 528 RNLIKIITICS-SIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYL------- 579
+N+I ++ + + E F + + L + +L Q + + +D + YL
Sbjct: 77 KNIISLLNVFTPQKTLEEFQDVYLV---MELMDANLCQVIQMELDHE-RMSYLLYQMLCG 132
Query: 580 -RHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTV 638
+H I+H DLKPSNI++ D + D GLA+ TA T+ T
Sbjct: 133 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---------TAGTSFMMTPYVVTR 183
Query: 639 GYVAPVII 646
Y AP +I
Sbjct: 184 YYRAPEVI 191
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 76/188 (40%), Gaps = 32/188 (17%)
Query: 477 KATNNFSPANKIREGGFNIVYNVAMKVANLKQKEASRSFAAEFNALRNIR---------H 527
K N P +G Y+ + N+ K+ SR F + +A R R H
Sbjct: 18 KRYQNLKPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 76
Query: 528 RNLIKIITICS-SIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYL------- 579
+N+I ++ + + E F + + L + +L Q + + +D + YL
Sbjct: 77 KNIISLLNVFTPQKTLEEFQDVYLV---MELMDANLCQVIQMELDHE-RMSYLLYQMLCG 132
Query: 580 -RHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTV 638
+H I+H DLKPSNI++ D + D GLA+ TA T+ T
Sbjct: 133 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---------TAGTSFMMTPYVVTR 183
Query: 639 GYVAPVII 646
Y AP +I
Sbjct: 184 YYRAPEVI 191
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 67/157 (42%), Gaps = 25/157 (15%)
Query: 477 KATNNFSPANKIREGGFNIVYNVAMKVANLKQKEASRSFAAEFNALRNIR---------H 527
K N P +G Y+ + N+ K+ SR F + +A R R H
Sbjct: 62 KRYQNLKPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 120
Query: 528 RNLIKIITICS-SIDFEGF-DFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYL------ 579
+N+I ++ + + E F D + + L + +L Q + + +D + YL
Sbjct: 121 KNIISLLNVFTPQKTLEEFQDVYLV----MELMDANLCQVIQMELDHE-RMSYLLYQMLC 175
Query: 580 --RHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
+H I+H DLKPSNI++ D + D GLA+
Sbjct: 176 GIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 212
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 76/188 (40%), Gaps = 32/188 (17%)
Query: 477 KATNNFSPANKIREGGFNIVYNVAMKVANLKQKEASRSFAAEFNALRNIR---------H 527
K N P +G Y+ + N+ K+ SR F + +A R R H
Sbjct: 24 KRYQNLKPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 528 RNLIKIITICS-SIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYL------- 579
+N+I ++ + + E F + + L + +L Q + + +D + YL
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLV---MELMDANLCQVIQMELDHE-RMSYLLYQMLCG 138
Query: 580 -RHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTV 638
+H I+H DLKPSNI++ D + D GLA+ TA T+ T
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---------TAGTSFMMTPYVVTR 189
Query: 639 GYVAPVII 646
Y AP +I
Sbjct: 190 YYRAPEVI 197
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 11/131 (8%)
Query: 518 EFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNG--QLRLCNLSLTQRVNIAIDVAFA 575
E L++ +H N+I I I FE F+ I Q L + TQ ++ F
Sbjct: 59 EIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFI 118
Query: 576 IEYLRH----HCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSS 631
+ LR H +++H DLKPSN+L++ + V D GLA+ + + A+ + +
Sbjct: 119 YQTLRAVKVLHGS-NVIHRDLKPSNLLINSNCDLKVCDFGLARII----DESAADNSEPT 173
Query: 632 IGINGTVGYVA 642
+G YVA
Sbjct: 174 GQQSGMTEYVA 184
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 76/188 (40%), Gaps = 32/188 (17%)
Query: 477 KATNNFSPANKIREGGFNIVYNVAMKVANLKQKEASRSFAAEFNALRNIR---------H 527
K N P +G Y+ + N+ K+ SR F + +A R R H
Sbjct: 62 KRYQNLKPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 120
Query: 528 RNLIKIITICS-SIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYL------- 579
+N+I ++ + + E F + + L + +L Q + + +D + YL
Sbjct: 121 KNIISLLNVFTPQKTLEEFQDVYLV---MELMDANLCQVIQMELDHE-RMSYLLYQMLCG 176
Query: 580 -RHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTV 638
+H I+H DLKPSNI++ D + D GLA+ TA T+ T
Sbjct: 177 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---------TAGTSFMMTPYVVTR 227
Query: 639 GYVAPVII 646
Y AP +I
Sbjct: 228 YYRAPEVI 235
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 14/81 (17%)
Query: 569 AIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETA 628
A + EYL H +++ DLKP N+L+DQ V D G AK + G
Sbjct: 168 AAQIVLTFEYL-HSL--DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG---------- 214
Query: 629 SSSIGINGTVGYVAPVIIAAR 649
+ + GT Y+AP II ++
Sbjct: 215 -RTWXLCGTPEYLAPEIILSK 234
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 68/174 (39%), Gaps = 41/174 (23%)
Query: 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFA-----AEFNALR 523
AT+ + P +I G + VY VA+K + E + A L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 524 NIRHRNLIKIITICSS----------IDFEGFDF-------KAISNGQLRLCNLSLTQRV 566
H N+++++ +C++ + FE D KA G L
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG------LPAETIK 115
Query: 567 NIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620
++ +++L +C IVH DLKP NIL+ + D GLA+ +Y Y+
Sbjct: 116 DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR-IYSYQ 165
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 68/174 (39%), Gaps = 41/174 (23%)
Query: 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFA-----AEFNALR 523
AT+ + P +I G + VY VA+K + E + A L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 524 NIRHRNLIKIITICSS----------IDFEGFDF-------KAISNGQLRLCNLSLTQRV 566
H N+++++ +C++ + FE D KA G L
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG------LPAETIK 115
Query: 567 NIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620
++ +++L +C IVH DLKP NIL+ + D GLA+ +Y Y+
Sbjct: 116 DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR-IYSYQ 165
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 76/188 (40%), Gaps = 32/188 (17%)
Query: 477 KATNNFSPANKIREGGFNIVYNVAMKVANLKQKEASRSFAAEFNALRNIR---------H 527
K N P +G Y+ + N+ K+ SR F + +A R R H
Sbjct: 25 KRYQNLKPIGSGAQGIVCAAYDAVLD-RNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 83
Query: 528 RNLIKIITICS-SIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYL------- 579
+N+I ++ + + E F + + L + +L Q + + +D + YL
Sbjct: 84 KNIISLLNVFTPQKTLEEFQDVYLV---MELMDANLCQVIQMELDHE-RMSYLLYQMLCG 139
Query: 580 -RHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTV 638
+H I+H DLKPSNI++ D + D GLA+ TA T+ T
Sbjct: 140 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---------TAGTSFMMTPYVVTR 190
Query: 639 GYVAPVII 646
Y AP +I
Sbjct: 191 YYRAPEVI 198
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 68/174 (39%), Gaps = 41/174 (23%)
Query: 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFA-----AEFNALR 523
AT+ + P +I G + VY VA+K + E + A L
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 524 NIRHRNLIKIITICSS----------IDFEGFDF-------KAISNGQLRLCNLSLTQRV 566
H N+++++ +C++ + FE D KA G L
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG------LPAETIK 115
Query: 567 NIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620
++ +++L +C IVH DLKP NIL+ + D GLA+ +Y Y+
Sbjct: 116 DLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR-IYSYQ 165
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 14/94 (14%)
Query: 556 RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615
R+ S A + EYL H +++ DLKP N+++DQ V D G AK
Sbjct: 134 RIGRFSEPHARFYAAQIVLTFEYL-HSL--DLIYRDLKPENLMIDQQGYIQVTDFGFAKR 190
Query: 616 LYGYEPGTTAETASSSIGINGTVGYVAPVIIAAR 649
+ G + + GT Y+AP II ++
Sbjct: 191 VKG-----------RTWXLCGTPEYLAPEIILSK 213
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 63/169 (37%), Gaps = 37/169 (21%)
Query: 480 NNFSPANKIREGGFNIVYNVAMKVANLKQ------------KEASRSFAAEFNALRNI-R 526
N+ + I EG F V +K L+ K+ R FA E L +
Sbjct: 22 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGH 81
Query: 527 HRNLIKIITICSSIDFEGFDFKAISNGQL---------------------RLCNLSLTQR 565
H N+I ++ C + + +G L LS Q
Sbjct: 82 HPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQL 141
Query: 566 VNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
++ A DVA ++YL Q +H +L NIL+ ++ V + D GL++
Sbjct: 142 LHFAADVARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSR 187
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 67/157 (42%), Gaps = 23/157 (14%)
Query: 502 KVANLKQKEASRS---FAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLRLC 558
KVA +E + S F E + + H L+++ +C F+ + +G L
Sbjct: 33 KVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLS-- 90
Query: 559 NLSLTQR--------VNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDL 610
+ TQR + + +DV + YL + S++H DL N L+ ++ V V D
Sbjct: 91 DYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EASVIHRDLAARNCLVGENQVIKVSDF 147
Query: 611 GLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIA 647
G+ +F+ + +SS G V + +P + +
Sbjct: 148 GMTRFVLD-------DQYTSSTGTKFPVKWASPEVFS 177
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 18/91 (19%)
Query: 566 VNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDV--------VTHVGDLGLAKFLY 617
VN A+ +A + YL I+H DLK SNIL+ Q V + + D GLA+ +
Sbjct: 108 VNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWH 167
Query: 618 GYEPGTTAETASSSIGINGTVGYVAPVIIAA 648
TT +A+ G ++AP +I A
Sbjct: 168 ----RTTKMSAA------GAYAWMAPEVIRA 188
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 14/94 (14%)
Query: 556 RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615
R+ S A + EYL H +++ DLKP N+++DQ V D G AK
Sbjct: 134 RIGRFSEPHARFYAAQIVLTFEYL-HSL--DLIYRDLKPENLIIDQQGYIQVTDFGFAKR 190
Query: 616 LYGYEPGTTAETASSSIGINGTVGYVAPVIIAAR 649
+ G + + GT Y+AP II ++
Sbjct: 191 VKG-----------RTWXLCGTPEYLAPEIIISK 213
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 55/128 (42%), Gaps = 23/128 (17%)
Query: 518 EFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAI- 576
E LR +RH+N+I+++ + + + K + C + + ++ + F +
Sbjct: 56 EIQLLRRLRHKNVIQLVDVLYNEE------KQKMYMVMEYCVCGMQEMLDSVPEKRFPVC 109
Query: 577 -------------EYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623
EYL H Q IVH D+KP N+LL + LG+A+ L+ +
Sbjct: 110 QAHGYFCQLIDGLEYL--HSQ-GIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADD 166
Query: 624 TAETASSS 631
T T+ S
Sbjct: 167 TCRTSQGS 174
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 14/94 (14%)
Query: 556 RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615
R+ S A + EYL H +++ DLKP N+++DQ V D G AK
Sbjct: 135 RIGRFSEPHARFYAAQIVLTFEYL-HSL--DLIYRDLKPENLMIDQQGYIKVTDFGFAKR 191
Query: 616 LYGYEPGTTAETASSSIGINGTVGYVAPVIIAAR 649
+ G + + GT Y+AP II ++
Sbjct: 192 VKG-----------RTWXLCGTPEYLAPEIILSK 214
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 50/116 (43%), Gaps = 14/116 (12%)
Query: 514 SFAAEFNALRNIRHRNLIKIITICSSIDFEG---FDFKAISNGQLR------LCNLSLTQ 564
F E +++ H N++ ++ IC + EG + +G LR N ++
Sbjct: 95 QFLTEGIIMKDFSHPNVLSLLGIC--LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD 152
Query: 565 RVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620
+ + VA ++YL VH DL N +LD+ V D GLA+ +Y E
Sbjct: 153 LIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 205
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 50/116 (43%), Gaps = 14/116 (12%)
Query: 514 SFAAEFNALRNIRHRNLIKIITICSSIDFEG---FDFKAISNGQLR------LCNLSLTQ 564
F E +++ H N++ ++ IC + EG + +G LR N ++
Sbjct: 76 QFLTEGIIMKDFSHPNVLSLLGIC--LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD 133
Query: 565 RVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620
+ + VA ++YL VH DL N +LD+ V D GLA+ +Y E
Sbjct: 134 LIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 186
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 14/94 (14%)
Query: 556 RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615
R+ S A + EYL H +++ DLKP N+++DQ V D G AK
Sbjct: 135 RIGRFSEPHARFYAAQIVLTFEYL-HSL--DLIYRDLKPENLMIDQQGYIKVTDFGFAKR 191
Query: 616 LYGYEPGTTAETASSSIGINGTVGYVAPVIIAAR 649
+ G + + GT Y+AP II ++
Sbjct: 192 VKG-----------RTWXLCGTPEYLAPEIILSK 214
>pdb|4B8C|D Chain D, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|J Chain J, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|K Chain K, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|L Chain L, Nuclease Module Of The Yeast Ccr4-Not Complex
Length = 727
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 51/114 (44%), Gaps = 10/114 (8%)
Query: 257 NLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTST 316
NLQ+ NI N + L+ L YL N +P+ + N +L L +SHN+LTS
Sbjct: 233 NLQIFNISANIFKYDFLTRL-------YLNGNSLTELPAEIKNLSNLRVLDLSHNRLTS- 284
Query: 317 LPQQILSVTTXXXXXXXXXXXXXGSLPPEVGNLKNLLRLHIPEYPENLSFFELL 370
LP ++ S +LP E GNL NL L + P F ++L
Sbjct: 285 LPAELGSC--FQLKYFYFFDNMVTTLPWEFGNLCNLQFLGVEGNPLEKQFLKIL 336
Score = 36.6 bits (83), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 185 LERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQL 244
L RLY N N LP I NLS+ ++ + + NR++S +P + + L + +
Sbjct: 249 LTRLYLNGNSLTE-LPAEIKNLSN-LRVLDLSHNRLTS-LPAELGSCFQLKYFYF-FDNM 304
Query: 245 IGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPS 295
+ T+P G NLQ L + GN L+ L L ++ +F L+ N P
Sbjct: 305 VTTLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIF-YLRDNRPE 354
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 50/116 (43%), Gaps = 14/116 (12%)
Query: 514 SFAAEFNALRNIRHRNLIKIITICSSIDFEG---FDFKAISNGQLR------LCNLSLTQ 564
F E +++ H N++ ++ IC + EG + +G LR N ++
Sbjct: 96 QFLTEGIIMKDFSHPNVLSLLGIC--LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD 153
Query: 565 RVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620
+ + VA ++YL VH DL N +LD+ V D GLA+ +Y E
Sbjct: 154 LIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 206
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 14/94 (14%)
Query: 556 RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615
R+ S A + EYL H +++ DLKP N+++DQ V D G AK
Sbjct: 134 RIGRFSEPHARFYAAQIVLTFEYL-HSL--DLIYRDLKPENLMIDQQGYIKVTDFGFAKR 190
Query: 616 LYGYEPGTTAETASSSIGINGTVGYVAPVIIAAR 649
+ G + + GT Y+AP II ++
Sbjct: 191 VKG-----------RTWXLCGTPEYLAPEIILSK 213
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 61/138 (44%), Gaps = 11/138 (7%)
Query: 518 EFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNG--QLRLCNLSLTQRVNIAIDVAFA 575
E L++ +H N+I I I FE F+ I Q L + TQ ++ F
Sbjct: 59 EIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFI 118
Query: 576 IEYLRH----HCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSS 631
+ LR H +++H DLKPSN+L++ + V D GLA+ + + T S
Sbjct: 119 YQTLRAVKVLHGS-NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQS 177
Query: 632 IGINGTVG---YVAPVII 646
G+ V Y AP ++
Sbjct: 178 -GMTEXVATRWYRAPEVM 194
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 14/94 (14%)
Query: 556 RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615
R+ S A + EYL H +++ DLKP N+++DQ V D G AK
Sbjct: 135 RIGRFSEPHARFYAAQIVLTFEYL-HSL--DLIYRDLKPENLMIDQQGYIKVTDFGFAKR 191
Query: 616 LYGYEPGTTAETASSSIGINGTVGYVAPVIIAAR 649
+ G + + GT Y+AP II ++
Sbjct: 192 VKG-----------RTWXLCGTPEYLAPEIILSK 214
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 50/116 (43%), Gaps = 14/116 (12%)
Query: 514 SFAAEFNALRNIRHRNLIKIITICSSIDFEG---FDFKAISNGQLR------LCNLSLTQ 564
F E +++ H N++ ++ IC + EG + +G LR N ++
Sbjct: 69 QFLTEGIIMKDFSHPNVLSLLGIC--LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD 126
Query: 565 RVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620
+ + VA ++YL VH DL N +LD+ V D GLA+ +Y E
Sbjct: 127 LIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 179
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 38.1 bits (87), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 67/161 (41%), Gaps = 15/161 (9%)
Query: 498 NVAMKVANLKQKEASR-SFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQL- 555
+VA+K + E R F E + + H N+I++ + + + + NG L
Sbjct: 75 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 556 -----RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDL 610
++ Q V + +A ++YL VH DL NIL++ ++V V D
Sbjct: 135 SFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM---GFVHRDLAARNILINSNLVCKVSDF 191
Query: 611 GLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNL 651
GL++ L E A ++ G + + +P IA R
Sbjct: 192 GLSRVLE-----DDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 67/161 (41%), Gaps = 15/161 (9%)
Query: 498 NVAMKVANLKQKEASR-SFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQL- 555
+VA+K + E R F E + + H N+I++ + + + + NG L
Sbjct: 75 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLD 134
Query: 556 -----RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDL 610
++ Q V + +A ++YL VH DL NIL++ ++V V D
Sbjct: 135 SFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDF 191
Query: 611 GLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNL 651
GL++ L E A ++ G + + +P IA R
Sbjct: 192 GLSRVL-----EDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 50/116 (43%), Gaps = 14/116 (12%)
Query: 514 SFAAEFNALRNIRHRNLIKIITICSSIDFEG---FDFKAISNGQLR------LCNLSLTQ 564
F E +++ H N++ ++ IC + EG + +G LR N ++
Sbjct: 77 QFLTEGIIMKDFSHPNVLSLLGIC--LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD 134
Query: 565 RVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620
+ + VA ++YL VH DL N +LD+ V D GLA+ +Y E
Sbjct: 135 LIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 187
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 47/109 (43%), Gaps = 15/109 (13%)
Query: 515 FAAEFNALRNIRHRNLIKIITICSSID--------FEGFDFKAISNGQ-LRLCNLSLTQR 565
F E L+ H N++++I +C+ +G DF + RL +L Q
Sbjct: 159 FLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQM 218
Query: 566 VNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
V D A +EYL C +H DL N L+ + V + D G+++
Sbjct: 219 VG---DAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSR 261
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 14/81 (17%)
Query: 569 AIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETA 628
A + EYL H +++ DLKP N+++DQ V D G AK + G
Sbjct: 148 AAQIVLTFEYL-HSL--DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG---------- 194
Query: 629 SSSIGINGTVGYVAPVIIAAR 649
+ + GT Y+AP II ++
Sbjct: 195 -RTWXLCGTPEYLAPEIILSK 214
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 79/184 (42%), Gaps = 29/184 (15%)
Query: 478 ATNNFSPANKIREGGFNIVYNVAMKVANLKQKEASR------SFAAEFNALRNIRHRNLI 531
+ F+ K RE + Y A K +Q ASR E + LR + H N+I
Sbjct: 21 GSGQFAIVKKCREKSTGLEY--AAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 532 KIITICSSIDFEGFDFKAISNGQL-----RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPS 586
+ + + + +S G+L + +LS + + + + YL H +
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYL--HTK-K 135
Query: 587 IVHGDLKPSNI-LLDQDV-VTHVG--DLGLAKFLYGYEPGTTAETASSSIGINGTVGYVA 642
I H DLKP NI LLD+++ + H+ D GLA + E G + I GT +VA
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLA---HEIEDGVEFK------NIFGTPEFVA 186
Query: 643 PVII 646
P I+
Sbjct: 187 PEIV 190
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 61/144 (42%), Gaps = 22/144 (15%)
Query: 511 ASRSFAAEFNALRNIRHRNLIKIITICSSI----DFEGF----DFKAISNGQLRLCNLSL 562
A R++ E L+++RH N+I ++ + + DF F F G+L
Sbjct: 68 AKRAYR-ELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLG 126
Query: 563 TQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPG 622
R+ V ++ LR+ I+H DLKP N+ +++D + D GLA+
Sbjct: 127 EDRIQFL--VYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLAR-------- 176
Query: 623 TTAETASSSIGINGTVGYVAPVII 646
+ S G T Y AP +I
Sbjct: 177 ---QADSEMXGXVVTRWYRAPEVI 197
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 47/109 (43%), Gaps = 15/109 (13%)
Query: 515 FAAEFNALRNIRHRNLIKIITICSSID--------FEGFDFKAISNGQ-LRLCNLSLTQR 565
F E L+ H N++++I +C+ +G DF + RL +L Q
Sbjct: 159 FLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQM 218
Query: 566 VNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
V D A +EYL C +H DL N L+ + V + D G+++
Sbjct: 219 VG---DAAAGMEYLESKC---CIHRDLAARNCLVTEKNVLKISDFGMSR 261
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 50/116 (43%), Gaps = 14/116 (12%)
Query: 514 SFAAEFNALRNIRHRNLIKIITICSSIDFEG---FDFKAISNGQLR------LCNLSLTQ 564
F E +++ H N++ ++ IC + EG + +G LR N ++
Sbjct: 77 QFLTEGIIMKDFSHPNVLSLLGIC--LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD 134
Query: 565 RVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620
+ + VA ++YL VH DL N +LD+ V D GLA+ +Y E
Sbjct: 135 LIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 187
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 50/116 (43%), Gaps = 14/116 (12%)
Query: 514 SFAAEFNALRNIRHRNLIKIITICSSIDFEG---FDFKAISNGQLR------LCNLSLTQ 564
F E +++ H N++ ++ IC + EG + +G LR N ++
Sbjct: 75 QFLTEGIIMKDFSHPNVLSLLGIC--LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD 132
Query: 565 RVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620
+ + VA ++YL VH DL N +LD+ V D GLA+ +Y E
Sbjct: 133 LIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 185
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 67/161 (41%), Gaps = 15/161 (9%)
Query: 498 NVAMKVANLKQKEASR-SFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQL- 555
+VA+K + E R F E + + H N+I++ + + + + NG L
Sbjct: 75 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLD 134
Query: 556 -----RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDL 610
++ Q V + +A ++YL VH DL NIL++ ++V V D
Sbjct: 135 SFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM---GAVHRDLAARNILINSNLVCKVSDF 191
Query: 611 GLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNL 651
GL++ L E A ++ G + + +P IA R
Sbjct: 192 GLSRVLE-----DDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 14/81 (17%)
Query: 569 AIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETA 628
A + EYL H +++ DLKP N+++DQ V D G AK + G
Sbjct: 147 AAQIVLTFEYL-HSL--DLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKG---------- 193
Query: 629 SSSIGINGTVGYVAPVIIAAR 649
+ + GT Y+AP II ++
Sbjct: 194 -RTWXLCGTPEYLAPEIILSK 213
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 50/116 (43%), Gaps = 14/116 (12%)
Query: 514 SFAAEFNALRNIRHRNLIKIITICSSIDFEG---FDFKAISNGQLR------LCNLSLTQ 564
F E +++ H N++ ++ IC + EG + +G LR N ++
Sbjct: 76 QFLTEGIIMKDFSHPNVLSLLGIC--LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD 133
Query: 565 RVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620
+ + VA ++YL VH DL N +LD+ V D GLA+ +Y E
Sbjct: 134 LIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 186
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 69/161 (42%), Gaps = 15/161 (9%)
Query: 498 NVAMKVANLKQKEASR-SFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQL- 555
+VA+K + E R F E + + H N+I++ + + + + NG L
Sbjct: 46 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLD 105
Query: 556 -----RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDL 610
++ Q V + +A ++YL VH DL NIL++ ++V V D
Sbjct: 106 SFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDF 162
Query: 611 GLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNL 651
GL++ L +P E A ++ G + + +P IA R
Sbjct: 163 GLSRVLED-DP----EAAYTTRGGKIPIRWTSPEAIAYRKF 198
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 79/184 (42%), Gaps = 29/184 (15%)
Query: 478 ATNNFSPANKIREGGFNIVYNVAMKVANLKQKEASR------SFAAEFNALRNIRHRNLI 531
+ F+ K RE + Y A K +Q ASR E + LR + H N+I
Sbjct: 21 GSGQFAIVKKCREKSTGLEY--AAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 532 KIITICSSIDFEGFDFKAISNGQL-----RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPS 586
+ + + + +S G+L + +LS + + + + YL H +
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYL--HTK-K 135
Query: 587 IVHGDLKPSNI-LLDQDV-VTHVG--DLGLAKFLYGYEPGTTAETASSSIGINGTVGYVA 642
I H DLKP NI LLD+++ + H+ D GLA + E G + I GT +VA
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLA---HEIEDGVEFK------NIFGTPEFVA 186
Query: 643 PVII 646
P I+
Sbjct: 187 PEIV 190
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 87/209 (41%), Gaps = 38/209 (18%)
Query: 462 SMKQQFPMISHAELSKAT-------NNFSPANKIREGGFNIVYNV--AMKVANLKQKEAS 512
SM Q+ P EL+K N SP G ++ ++VA K+ S
Sbjct: 12 SMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVA---VKKLS 68
Query: 513 RSFAA---------EFNALRNIRHRNLIKIITICS-SIDFEGF-DFKAISNGQ-LRLCNL 560
R F + E L++++H N+I ++ + + + E F D +++ L N+
Sbjct: 69 RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 128
Query: 561 SLTQRV---NIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617
Q++ ++ + + L++ I+H DLKPSN+ +++D + D GLA+
Sbjct: 129 VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 185
Query: 618 GYEPGTTAETASSSIGINGTVGYVAPVII 646
T G T Y AP I+
Sbjct: 186 --------HTDDEMTGYVATRWYRAPEIM 206
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 69/182 (37%), Gaps = 47/182 (25%)
Query: 480 NNFSPANKIREGGFNIVYNV-----------AMKVANLKQKEASRSFAAEFNA----LRN 524
NN I EG F V+ M + ++EAS A+F +
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 106
Query: 525 IRHRNLIKIITICSSIDFEGFDFKAISNGQL----------RLCNLS------------- 561
+ N++K++ +C+ F+ ++ G L +C+LS
Sbjct: 107 FDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSP 166
Query: 562 ------LTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615
+++ IA VA + YL VH DL N L+ +++V + D GL++
Sbjct: 167 GPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRN 223
Query: 616 LY 617
+Y
Sbjct: 224 IY 225
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 87/209 (41%), Gaps = 38/209 (18%)
Query: 462 SMKQQFPMISHAELSKAT-------NNFSPANKIREGGFNIVYNV--AMKVANLKQKEAS 512
SM Q+ P EL+K N SP G ++ ++VA K+ S
Sbjct: 12 SMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVA---VKKLS 68
Query: 513 RSFAA---------EFNALRNIRHRNLIKIITICS-SIDFEGF-DFKAISNGQ-LRLCNL 560
R F + E L++++H N+I ++ + + + E F D +++ L N+
Sbjct: 69 RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 128
Query: 561 SLTQRV---NIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617
Q++ ++ + + L++ I+H DLKPSN+ +++D + D GLA+
Sbjct: 129 VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 185
Query: 618 GYEPGTTAETASSSIGINGTVGYVAPVII 646
T G T Y AP I+
Sbjct: 186 --------HTDDEMTGYVATRWYRAPEIM 206
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 50/116 (43%), Gaps = 14/116 (12%)
Query: 514 SFAAEFNALRNIRHRNLIKIITICSSIDFEG---FDFKAISNGQLR------LCNLSLTQ 564
F E +++ H N++ ++ IC + EG + +G LR N ++
Sbjct: 74 QFLTEGIIMKDFSHPNVLSLLGIC--LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD 131
Query: 565 RVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620
+ + VA ++YL VH DL N +LD+ V D GLA+ +Y E
Sbjct: 132 LIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 184
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 50/116 (43%), Gaps = 14/116 (12%)
Query: 514 SFAAEFNALRNIRHRNLIKIITICSSIDFEG---FDFKAISNGQLR------LCNLSLTQ 564
F E +++ H N++ ++ IC + EG + +G LR N ++
Sbjct: 72 QFLTEGIIMKDFSHPNVLSLLGIC--LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD 129
Query: 565 RVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620
+ + VA ++YL VH DL N +LD+ V D GLA+ +Y E
Sbjct: 130 LIGFGLQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 182
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 14/81 (17%)
Query: 569 AIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETA 628
A + EYL H +++ DLKP N+L+D+ V D G AK + G
Sbjct: 134 AAQIVLTFEYL-HSL--DLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKG---------- 180
Query: 629 SSSIGINGTVGYVAPVIIAAR 649
+ + GT Y+AP II ++
Sbjct: 181 -RTWXLCGTPEYLAPEIILSK 200
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 79/184 (42%), Gaps = 29/184 (15%)
Query: 478 ATNNFSPANKIREGGFNIVYNVAMKVANLKQKEASR------SFAAEFNALRNIRHRNLI 531
+ F+ K RE + Y A K +Q ASR E + LR + H N+I
Sbjct: 21 GSGQFAIVKKCREKSTGLEY--AAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNII 78
Query: 532 KIITICSSIDFEGFDFKAISNGQL-----RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPS 586
+ + + + +S G+L + +LS + + + + YL H +
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYL--HTK-K 135
Query: 587 IVHGDLKPSNI-LLDQDV-VTHVG--DLGLAKFLYGYEPGTTAETASSSIGINGTVGYVA 642
I H DLKP NI LLD+++ + H+ D GLA + E G + I GT +VA
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLA---HEIEDGVEFK------NIFGTPEFVA 186
Query: 643 PVII 646
P I+
Sbjct: 187 PEIV 190
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 79/184 (42%), Gaps = 29/184 (15%)
Query: 478 ATNNFSPANKIREGGFNIVYNVAMKVANLKQKEASR------SFAAEFNALRNIRHRNLI 531
+ F+ K RE + Y A K +Q ASR E + LR + H N+I
Sbjct: 21 GSGQFAIVKKCREKSTGLEY--AAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 532 KIITICSSIDFEGFDFKAISNGQL-----RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPS 586
+ + + + +S G+L + +LS + + + + YL H +
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYL--HTK-K 135
Query: 587 IVHGDLKPSNI-LLDQDV-VTHVG--DLGLAKFLYGYEPGTTAETASSSIGINGTVGYVA 642
I H DLKP NI LLD+++ + H+ D GLA + E G + I GT +VA
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLA---HEIEDGVEFK------NIFGTPEFVA 186
Query: 643 PVII 646
P I+
Sbjct: 187 PEIV 190
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 79/184 (42%), Gaps = 29/184 (15%)
Query: 478 ATNNFSPANKIREGGFNIVYNVAMKVANLKQKEASR------SFAAEFNALRNIRHRNLI 531
+ F+ K RE + Y A K +Q ASR E + LR + H N+I
Sbjct: 21 GSGQFAIVKKCREKSTGLEY--AAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 532 KIITICSSIDFEGFDFKAISNGQL-----RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPS 586
+ + + + +S G+L + +LS + + + + YL H +
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYL--HTK-K 135
Query: 587 IVHGDLKPSNI-LLDQDV-VTHVG--DLGLAKFLYGYEPGTTAETASSSIGINGTVGYVA 642
I H DLKP NI LLD+++ + H+ D GLA + E G + I GT +VA
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLA---HEIEDGVEFK------NIFGTPEFVA 186
Query: 643 PVII 646
P I+
Sbjct: 187 PEIV 190
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 87/209 (41%), Gaps = 38/209 (18%)
Query: 462 SMKQQFPMISHAELSKAT-------NNFSPANKIREGGFNIVYNV--AMKVANLKQKEAS 512
SM Q+ P EL+K N SP G ++ ++VA K+ S
Sbjct: 2 SMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVA---VKKLS 58
Query: 513 RSFAA---------EFNALRNIRHRNLIKIITICS-SIDFEGF-DFKAISNGQ-LRLCNL 560
R F + E L++++H N+I ++ + + + E F D +++ L N+
Sbjct: 59 RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 118
Query: 561 SLTQRV---NIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617
Q++ ++ + + L++ I+H DLKPSN+ +++D + D GLA+
Sbjct: 119 VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 175
Query: 618 GYEPGTTAETASSSIGINGTVGYVAPVII 646
T G T Y AP I+
Sbjct: 176 --------HTDDEMTGYVATRWYRAPEIM 196
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 67/161 (41%), Gaps = 15/161 (9%)
Query: 498 NVAMKVANLKQKEASR-SFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQL- 555
+VA+K + E R F E + + H N+I++ + + + + NG L
Sbjct: 75 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 556 -----RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDL 610
++ Q V + +A ++YL VH DL NIL++ ++V V D
Sbjct: 135 SFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDF 191
Query: 611 GLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNL 651
GL++ L E A ++ G + + +P IA R
Sbjct: 192 GLSRVL-----EDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 67/161 (41%), Gaps = 15/161 (9%)
Query: 498 NVAMKVANLKQKEASR-SFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQL- 555
+VA+K + E R F E + + H N+I++ + + + + NG L
Sbjct: 75 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 556 -----RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDL 610
++ Q V + +A ++YL VH DL NIL++ ++V V D
Sbjct: 135 SFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDF 191
Query: 611 GLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNL 651
GL++ L E A ++ G + + +P IA R
Sbjct: 192 GLSRVL-----EDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 67/161 (41%), Gaps = 15/161 (9%)
Query: 498 NVAMKVANLKQKEASR-SFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQL- 555
+VA+K + E R F E + + H N+I++ + + + + NG L
Sbjct: 75 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 556 -----RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDL 610
++ Q V + +A ++YL VH DL NIL++ ++V V D
Sbjct: 135 SFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDF 191
Query: 611 GLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNL 651
GL++ L E A ++ G + + +P IA R
Sbjct: 192 GLSRVL-----EDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 67/161 (41%), Gaps = 14/161 (8%)
Query: 496 VYNVAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQL 555
V AM V N K ++ AE N L ++H ++ +I + + +S G+L
Sbjct: 52 VLKKAMIVRNAKDTAHTK---AERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGEL 108
Query: 556 --RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLA 613
+L + +A L H Q I++ DLKP NI+L+ + D GL
Sbjct: 109 FMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLC 168
Query: 614 KFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENR 654
K GT T GT+ Y+AP I+ R+ NR
Sbjct: 169 K--ESIHDGTVTHT------FCGTIEYMAPEIL-MRSGHNR 200
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 67/161 (41%), Gaps = 15/161 (9%)
Query: 498 NVAMKVANLKQKEASR-SFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQL- 555
+VA+K + E R F E + + H N+I++ + + + + NG L
Sbjct: 75 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 556 -----RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDL 610
++ Q V + +A ++YL VH DL NIL++ ++V V D
Sbjct: 135 SFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDF 191
Query: 611 GLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNL 651
GL++ L E A ++ G + + +P IA R
Sbjct: 192 GLSRVL-----EDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 67/161 (41%), Gaps = 15/161 (9%)
Query: 498 NVAMKVANLKQKEASR-SFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQL- 555
+VA+K + E R F E + + H N+I++ + + + + NG L
Sbjct: 73 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 132
Query: 556 -----RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDL 610
++ Q V + +A ++YL VH DL NIL++ ++V V D
Sbjct: 133 SFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDF 189
Query: 611 GLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNL 651
GL++ L E A ++ G + + +P IA R
Sbjct: 190 GLSRVL-----EDDPEAAYTTRGGKIPIRWTSPEAIAYRKF 225
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 79/184 (42%), Gaps = 29/184 (15%)
Query: 478 ATNNFSPANKIREGGFNIVYNVAMKVANLKQKEASR------SFAAEFNALRNIRHRNLI 531
+ F+ K RE + Y A K +Q ASR E + LR + H N+I
Sbjct: 21 GSGQFAIVKKCREKSTGLEY--AAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 532 KIITICSSIDFEGFDFKAISNGQL-----RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPS 586
+ + + + +S G+L + +LS + + + + YL H +
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYL--HTK-K 135
Query: 587 IVHGDLKPSNI-LLDQDV-VTHVG--DLGLAKFLYGYEPGTTAETASSSIGINGTVGYVA 642
I H DLKP NI LLD+++ + H+ D GLA + E G + I GT +VA
Sbjct: 136 IAHFDLKPENIMLLDKNIPIPHIKLIDFGLA---HEIEDGVEFK------NIFGTPEFVA 186
Query: 643 PVII 646
P I+
Sbjct: 187 PEIV 190
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 69/161 (42%), Gaps = 15/161 (9%)
Query: 498 NVAMKVANLKQKEASR-SFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQL- 555
+VA+K + E R F E + + H N+I++ + + + + NG L
Sbjct: 63 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 122
Query: 556 -----RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDL 610
++ Q V + +A ++YL VH DL NIL++ ++V V D
Sbjct: 123 SFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDF 179
Query: 611 GLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNL 651
GL++ L +P E A ++ G + + +P IA R
Sbjct: 180 GLSRVLED-DP----EAAYTTRGGKIPIRWTSPEAIAYRKF 215
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 66/161 (40%), Gaps = 15/161 (9%)
Query: 498 NVAMKVANLKQKEASR-SFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQL- 555
+VA+K + E R F E + + H N+I++ + + + + NG L
Sbjct: 75 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 556 -----RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDL 610
++ Q V + +A ++YL VH DL NIL++ ++V V D
Sbjct: 135 SFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDF 191
Query: 611 GLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNL 651
GL + L E A ++ G + + +P IA R
Sbjct: 192 GLGRVLE-----DDPEAAYTTRGGKIPIRWTSPEAIAYRKF 227
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 53/126 (42%), Gaps = 12/126 (9%)
Query: 515 FAAEFNALRNIRHRNLIKIITICSS-------IDFEGFDFKAISNGQLRLCNLSLTQRVN 567
+ E LR + H +++K C + E ++ + R C + L Q +
Sbjct: 57 WQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHC-VGLAQLLL 115
Query: 568 IAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFL-YGYEPGTTAE 626
A + + YL H Q +H L N+LLD D + +GD GLAK + G+E E
Sbjct: 116 FAQQICEGMAYL--HAQ-HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVRE 172
Query: 627 TASSSI 632
S +
Sbjct: 173 DGDSPV 178
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 37.7 bits (86), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 79/205 (38%), Gaps = 52/205 (25%)
Query: 476 SKATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASR-----SFAAEFNA 521
S AT+ + P +I G + VY VA+K + S E
Sbjct: 5 SMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVAL 64
Query: 522 LRNIR---HRNLIKIITICSS----------IDFEGFDF-------KAISNGQLRLCNLS 561
LR + H N+++++ +C++ + FE D KA G L
Sbjct: 65 LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG------LP 118
Query: 562 LTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEP 621
++ +++L +C IVH DLKP NIL+ + D GLA+ +Y Y+
Sbjct: 119 AETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR-IYSYQM 174
Query: 622 GTTAETASSSIGINGTVGYVAPVII 646
T + T+ Y AP ++
Sbjct: 175 ALTP--------VVVTLWYRAPEVL 191
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 37.7 bits (86), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 53/126 (42%), Gaps = 12/126 (9%)
Query: 515 FAAEFNALRNIRHRNLIKIITICSS-------IDFEGFDFKAISNGQLRLCNLSLTQRVN 567
+ E LR + H +++K C + E ++ + R C + L Q +
Sbjct: 58 WQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHC-VGLAQLLL 116
Query: 568 IAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFL-YGYEPGTTAE 626
A + + YL H Q +H L N+LLD D + +GD GLAK + G+E E
Sbjct: 117 FAQQICEGMAYL--HAQ-HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVRE 173
Query: 627 TASSSI 632
S +
Sbjct: 174 DGDSPV 179
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 37.7 bits (86), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 65/133 (48%), Gaps = 20/133 (15%)
Query: 497 YNVAMKVA--NLKQKEAS-RSFAAEFNALRNIRHRNLIKIITICSS----IDFEGF---- 545
YN KVA +LKQ S +F AE N ++ ++H+ L+++ + + I E
Sbjct: 30 YNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYMENGS 89
Query: 546 --DFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDV 603
DF +G L++ + +++A +A + ++ + +H +L+ +NIL+ +
Sbjct: 90 LVDFLKTPSG----IKLTINKLLDMAAQIAEGMAFIEER---NYIHRNLRAANILVSDTL 142
Query: 604 VTHVGDLGLAKFL 616
+ D GLA+ +
Sbjct: 143 SCKIADFGLARLI 155
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 37.7 bits (86), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 575 AIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
A+ Y+ H Q I+H DLKP NI +D+ +GD GLAK
Sbjct: 128 ALSYI--HSQ-GIIHRDLKPMNIFIDESRNVKIGDFGLAK 164
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 37.4 bits (85), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 69/161 (42%), Gaps = 15/161 (9%)
Query: 498 NVAMKVANLKQKEASR-SFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQL- 555
+VA+K + E R F E + + H N+I++ + + + + NG L
Sbjct: 46 SVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 105
Query: 556 -----RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDL 610
++ Q V + +A ++YL VH DL NIL++ ++V V D
Sbjct: 106 SFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDF 162
Query: 611 GLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNL 651
GL++ L +P E A ++ G + + +P IA R
Sbjct: 163 GLSRVLED-DP----EAAYTTRGGKIPIRWTSPEAIAYRKF 198
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 68/162 (41%), Gaps = 31/162 (19%)
Query: 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAA--EFNALRNIRH 527
+ + KI +G F V+ VA+K ++ ++ A E L+ ++H
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 528 RNLIKIITICSS---------------IDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDV 572
N++ +I IC + DF D + + L LS +RV +
Sbjct: 77 ENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRV-----M 131
Query: 573 AFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
+ L + + I+H D+K +N+L+ +D V + D GLA+
Sbjct: 132 QMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 37.4 bits (85), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 34/72 (47%), Gaps = 10/72 (13%)
Query: 587 IVHGDLKPSNILLDQ-----DVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYV 641
IVH DLKP NIL+ + + D GL K L + S G+ GT G++
Sbjct: 139 IVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKL-----AVGRHSFSRRSGVPGTEGWI 193
Query: 642 APVIIAARNLEN 653
AP +++ EN
Sbjct: 194 APEMLSEDCKEN 205
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 37.4 bits (85), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 73/178 (41%), Gaps = 32/178 (17%)
Query: 463 MKQQFPMISHAELSKATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASR 513
M +Q+ + + + KI +G F V+ VA+K ++ ++
Sbjct: 1 MAKQYDSVE-CPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGF 59
Query: 514 SFAA--EFNALRNIRHRNLIKIITICSS---------------IDFEGFDFKAISNGQLR 556
A E L+ ++H N++ +I IC + DF D + + L
Sbjct: 60 PITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLV 119
Query: 557 LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
LS +RV + + L + + I+H D+K +N+L+ +D V + D GLA+
Sbjct: 120 KFTLSEIKRV-----MQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLAR 172
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 61/147 (41%), Gaps = 14/147 (9%)
Query: 505 NLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQL--RLCNLSL 562
+KQK S E L+ + H N++K+ + + + G+L + +
Sbjct: 69 QVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR 128
Query: 563 TQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLD---QDVVTHVGDLGLAKFLYGY 619
V+ A + + + + + IVH DLKP N+LL+ +D + D GL+
Sbjct: 129 FSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS------ 182
Query: 620 EPGTTAETASSSIGINGTVGYVAPVII 646
T E + GT Y+AP ++
Sbjct: 183 ---THFEASKKMKDKIGTAYYIAPEVL 206
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 48/216 (22%), Positives = 86/216 (39%), Gaps = 54/216 (25%)
Query: 471 SHAELSKATNNFSPAN------KIREGGFNIVYNV---------AMKVANLKQKEASRSF 515
S + T + +P + ++ +G F VY A KV + K +E +
Sbjct: 22 SMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDY 81
Query: 516 AAEFNALRNIRHRNLIKI-------------ITICS--SIDFEGFDF-KAISNGQLRL-C 558
E + L + H N++K+ I C+ ++D + + ++ Q+++ C
Sbjct: 82 MVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVC 141
Query: 559 NLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618
+L A+ YL + I+H DLK NIL D GD+ LA F
Sbjct: 142 KQTLD-----------ALNYLHDN---KIIHRDLKAGNILFTLD-----GDIKLADFGVS 182
Query: 619 YEPGTTAETASSSIGINGTVGYVAPVIIAARNLENR 654
+ T + S I GT ++AP ++ ++R
Sbjct: 183 AKNTRTIQRRDSFI---GTPYWMAPEVVMCETSKDR 215
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 37.4 bits (85), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 37/162 (22%), Positives = 68/162 (41%), Gaps = 31/162 (19%)
Query: 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAA--EFNALRNIRH 527
+ + KI +G F V+ VA+K ++ ++ A E L+ ++H
Sbjct: 17 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKH 76
Query: 528 RNLIKIITICSS---------------IDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDV 572
N++ +I IC + DF D + + L LS +RV +
Sbjct: 77 ENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRV-----M 131
Query: 573 AFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
+ L + + I+H D+K +N+L+ +D V + D GLA+
Sbjct: 132 QMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 37.4 bits (85), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 87/209 (41%), Gaps = 38/209 (18%)
Query: 462 SMKQQFPMISHAELSKAT-------NNFSPANKIREGGFNIVYNV--AMKVANLKQKEAS 512
SM Q+ P EL+K N SP G ++ ++VA K+ S
Sbjct: 2 SMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVA---VKKLS 58
Query: 513 RSFAA---------EFNALRNIRHRNLIKIITICS-SIDFEGF-DFKAISNGQ-LRLCNL 560
R F + E L++++H N+I ++ + + + E F D +++ L N+
Sbjct: 59 RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 118
Query: 561 SLTQRV---NIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617
Q++ ++ + + L++ I+H DLKPSN+ +++D + D GLA+
Sbjct: 119 VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLAR--- 175
Query: 618 GYEPGTTAETASSSIGINGTVGYVAPVII 646
T G T Y AP I+
Sbjct: 176 --------HTDDEMTGYVATRWYRAPEIM 196
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 11/82 (13%)
Query: 569 AIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETA 628
+ +++ A+ YL I++ DLK N+LLD + + D G+ K G PG T T
Sbjct: 159 SAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTST- 212
Query: 629 SSSIGINGTVGYVAPVIIAARN 650
GT Y+AP I+ +
Sbjct: 213 -----FCGTPNYIAPEILRGED 229
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 66/154 (42%), Gaps = 31/154 (20%)
Query: 487 KIREGGFNIVYN---------VAMKVANLKQKEASRSFAA--EFNALRNIRHRNLIKIIT 535
KI +G F V+ VA+K ++ ++ A E L+ ++H N++ +I
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 536 ICSS---------------IDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLR 580
IC + DF D + + L LS +RV + + L
Sbjct: 85 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRV-----MQMLLNGLY 139
Query: 581 HHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
+ + I+H D+K +N+L+ +D V + D GLA+
Sbjct: 140 YIHRNKILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 14/96 (14%)
Query: 567 NIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAE 626
IA+ + A+E+L H + S++H D+KPSN+L++ + D G++ GY + A+
Sbjct: 157 KIAVSIVKALEHL--HSKLSVIHRDVKPSNVLINALGQVKMCDFGIS----GYLVDSVAK 210
Query: 627 TASSSIGINGTVGYVAPVIIAARNLENREKRHTVMS 662
T + G Y+AP I N E +K ++V S
Sbjct: 211 TIDA-----GCKPYMAPERI---NPELNQKGYSVKS 238
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 37.4 bits (85), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 10/76 (13%)
Query: 571 DVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASS 630
++ A++YL H + ++V+ DLK N++LD+D + D GL K G + G T +
Sbjct: 116 EIVSALDYL--HSEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKX--- 168
Query: 631 SIGINGTVGYVAPVII 646
GT Y+AP ++
Sbjct: 169 ---FCGTPEYLAPEVL 181
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 37.4 bits (85), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 86/207 (41%), Gaps = 34/207 (16%)
Query: 462 SMKQQFPMISHAELSKAT-------NNFSPANKIREG----GFNIVYNVAMKVANLKQK- 509
SM Q+ P EL+K N SP G F+ + + V L +
Sbjct: 12 SMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPF 71
Query: 510 ----EASRSFAAEFNALRNIRHRNLIKIITICS-SIDFEGF-DFKAISNGQ-LRLCNLSL 562
A R++ E L++++H N+I ++ + + + E F D +++ L N+
Sbjct: 72 QSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK 130
Query: 563 TQRV---NIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGY 619
Q++ ++ + + L++ I+H DLKPSN+ +++D + D GLA+
Sbjct: 131 CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR----- 185
Query: 620 EPGTTAETASSSIGINGTVGYVAPVII 646
T G T Y AP I+
Sbjct: 186 ------HTDDEMTGYVATRWYRAPEIM 206
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 37.0 bits (84), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 85/206 (41%), Gaps = 37/206 (17%)
Query: 461 LSMKQQFPMISHAELSK--ATNNFSPANKIREGGFNIVYNVAMKVANLKQKEASR----- 513
+S +Q + H E+ + + F+ K R+ G Y A K ++ +SR
Sbjct: 2 MSTFRQEDVEDHYEMGEELGSGQFAIVRKCRQKGTGKEY--AAKFIKKRRLSSSRRGVSR 59
Query: 514 -SFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQL--------RLCNLSLTQ 564
E N LR IRH N+I + I + + +S G+L L TQ
Sbjct: 60 EEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQ 119
Query: 565 RVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNI-LLDQDV---VTHVGDLGLAKFLYGYE 620
+ +D + YL H + I H DLKP NI LLD++V + D G+A +
Sbjct: 120 FLKQILD---GVHYL--HSK-RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI---- 169
Query: 621 PGTTAETASSSIGINGTVGYVAPVII 646
E + I GT +VAP I+
Sbjct: 170 -----EAGNEFKNIFGTPEFVAPEIV 190
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 10/76 (13%)
Query: 571 DVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASS 630
++ A++YL H + ++V+ DLK N++LD+D + D GL K G + G T +
Sbjct: 117 EIVSALDYL--HSEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKX--- 169
Query: 631 SIGINGTVGYVAPVII 646
GT Y+AP ++
Sbjct: 170 ---FCGTPEYLAPEVL 182
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 10/76 (13%)
Query: 571 DVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASS 630
++ A++YL H + ++V+ DLK N++LD+D + D GL K G + G T +
Sbjct: 118 EIVSALDYL--HSEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--EGIKDGATMKX--- 170
Query: 631 SIGINGTVGYVAPVII 646
GT Y+AP ++
Sbjct: 171 ---FCGTPEYLAPEVL 183
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 11/61 (18%)
Query: 586 SIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVI 645
I+H DLKPSN+ +++D + D GLA+ TA G T Y AP I
Sbjct: 152 DIIHRDLKPSNLAVNEDCELKILDFGLAR-----------HTADEMTGYVATRWYRAPEI 200
Query: 646 I 646
+
Sbjct: 201 M 201
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 67/142 (47%), Gaps = 18/142 (12%)
Query: 511 ASRSFAAEFNALRNIRHRNLIKIITICS-SIDFEGF-DFKAISNGQ-LRLCNLSLTQRV- 566
A R++ E L++++H N+I ++ + + + E F D +++ L N+ Q++
Sbjct: 72 AKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 130
Query: 567 --NIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTT 624
++ + + L++ I+H DLKPSN+ +++D + D GLA+
Sbjct: 131 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---------- 180
Query: 625 AETASSSIGINGTVGYVAPVII 646
TA G T Y AP I+
Sbjct: 181 -HTADEMTGYVATRWYRAPEIM 201
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 587 IVHGDLKPSNILLDQDVVTHVGDLGLAK 614
I+H DLKP+N LL+QD V D GLA+
Sbjct: 150 IIHRDLKPANCLLNQDCSVKVCDFGLAR 177
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 37.0 bits (84), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 30/142 (21%), Positives = 67/142 (47%), Gaps = 14/142 (9%)
Query: 486 NKIREGGFNIVYNV--------AMKVANLKQKEAS--RSFAAEFNALRNIRHRNLIKIIT 535
KI EG + +VY A+K L++++ + E + L+ ++H N++K+
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 536 ICSSIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLR--HHCQPS-IVHGDL 592
+ + F+ + +L ++ ++ +F ++ L +C ++H DL
Sbjct: 68 VIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAK-SFLLQLLNGIAYCHDRRVLHRDL 126
Query: 593 KPSNILLDQDVVTHVGDLGLAK 614
KP N+L++++ + D GLA+
Sbjct: 127 KPQNLLINREGELKIADFGLAR 148
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 37.0 bits (84), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 54/120 (45%), Gaps = 25/120 (20%)
Query: 542 FEGFDFKAISNGQLRLCN----LSLTQRVNIAIDVAFAIEYLRH---HCQP----SIVHG 590
FE DF + L LC L L +R A+ A YLR CQ ++H
Sbjct: 86 FEDNDFVFVV---LELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYLHRNRVIHR 141
Query: 591 DLKPSNILLDQDVVTHVGDLGLA-KFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAAR 649
DLK N+ L++D+ +GD GLA K Y E T + GT Y+AP +++ +
Sbjct: 142 DLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT---------LCGTPNYIAPEVLSKK 192
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 37.0 bits (84), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 11/61 (18%)
Query: 586 SIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVI 645
I+H DLKPSN+ +++D + D GLA+ TA G T Y AP I
Sbjct: 152 DIIHRDLKPSNLAVNEDCELKILDFGLAR-----------HTADEMTGYVATRWYRAPEI 200
Query: 646 I 646
+
Sbjct: 201 M 201
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 37.0 bits (84), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 75/172 (43%), Gaps = 33/172 (19%)
Query: 498 NVAMKVANLKQKEAS--RSFAAEFNALRNIRHRNLIKIITICSS-------IDF----EG 544
VA+K+ + Q +S + E ++ + H N++K+ + + +++ E
Sbjct: 41 EVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEV 100
Query: 545 FDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVV 604
FD+ +++G+++ R + A++Y Q IVH DLK N+LLD D+
Sbjct: 101 FDY-LVAHGRMKEKEARAKFR-----QIVSAVQYCH---QKFIVHRDLKAENLLLDADMN 151
Query: 605 THVGDLGLA-KFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENRE 655
+ D G + +F +G + T G+ Y AP + + + E
Sbjct: 152 IKIADFGFSNEFTFGNKLDTFC----------GSPPYAAPELFQGKKYDGPE 193
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 37.0 bits (84), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 67/161 (41%), Gaps = 14/161 (8%)
Query: 496 VYNVAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQL 555
V AM V N K ++ AE N L ++H ++ +I + + +S G+L
Sbjct: 52 VLKKAMIVRNAKDTAHTK---AERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGEL 108
Query: 556 --RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLA 613
+L + +A L H Q I++ DLKP NI+L+ + D GL
Sbjct: 109 FMQLEREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLC 168
Query: 614 KFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENR 654
K + + + GT+ Y+AP I+ R+ NR
Sbjct: 169 K--------ESIHDGTVTHXFCGTIEYMAPEIL-MRSGHNR 200
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 37.0 bits (84), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 66/135 (48%), Gaps = 23/135 (17%)
Query: 497 YNVAMKVA--NLKQKEAS-RSFAAEFNALRNIRHRNLIKI---------ITICSSIDFEG 544
YN + KVA LK S ++F E N ++ ++H L+++ I I + +G
Sbjct: 33 YNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKG 92
Query: 545 --FDF-KAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQ 601
DF K+ G++ L L ++ + +A + Y+ + +H DL+ +N+L+ +
Sbjct: 93 SLLDFLKSDEGGKVLLPKL-----IDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSE 144
Query: 602 DVVTHVGDLGLAKFL 616
++ + D GLA+ +
Sbjct: 145 SLMCKIADFGLARVI 159
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 37.0 bits (84), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 30/142 (21%), Positives = 67/142 (47%), Gaps = 14/142 (9%)
Query: 486 NKIREGGFNIVYNV--------AMKVANLKQKEAS--RSFAAEFNALRNIRHRNLIKIIT 535
KI EG + +VY A+K L++++ + E + L+ ++H N++K+
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 536 ICSSIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLR--HHCQPS-IVHGDL 592
+ + F+ + +L ++ ++ +F ++ L +C ++H DL
Sbjct: 68 VIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAK-SFLLQLLNGIAYCHDRRVLHRDL 126
Query: 593 KPSNILLDQDVVTHVGDLGLAK 614
KP N+L++++ + D GLA+
Sbjct: 127 KPQNLLINREGELKIADFGLAR 148
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 37.0 bits (84), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 54/120 (45%), Gaps = 25/120 (20%)
Query: 542 FEGFDFKAISNGQLRLCN----LSLTQRVNIAIDVAFAIEYLRH---HCQP----SIVHG 590
FE DF + L LC L L +R A+ A YLR CQ ++H
Sbjct: 86 FEDNDFVFVV---LELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYLHRNRVIHR 141
Query: 591 DLKPSNILLDQDVVTHVGDLGLA-KFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAAR 649
DLK N+ L++D+ +GD GLA K Y E T + GT Y+AP +++ +
Sbjct: 142 DLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT---------LCGTPNYIAPEVLSKK 192
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 37.0 bits (84), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 50/115 (43%), Gaps = 14/115 (12%)
Query: 515 FAAEFNALRNIRHRNLIKIITICSSIDFEG---FDFKAISNGQLR------LCNLSLTQR 565
F E +++ H N++ ++ IC + EG + +G LR N ++
Sbjct: 137 FLTEGIIMKDFSHPNVLSLLGIC--LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL 194
Query: 566 VNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620
+ + VA +++L VH DL N +LD+ V D GLA+ +Y E
Sbjct: 195 IGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 246
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 37.0 bits (84), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 30/142 (21%), Positives = 67/142 (47%), Gaps = 14/142 (9%)
Query: 486 NKIREGGFNIVYNV--------AMKVANLKQKEAS--RSFAAEFNALRNIRHRNLIKIIT 535
KI EG + +VY A+K L++++ + E + L+ ++H N++K+
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 536 ICSSIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLR--HHCQPS-IVHGDL 592
+ + F+ + +L ++ ++ +F ++ L +C ++H DL
Sbjct: 68 VIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAK-SFLLQLLNGIAYCHDRRVLHRDL 126
Query: 593 KPSNILLDQDVVTHVGDLGLAK 614
KP N+L++++ + D GLA+
Sbjct: 127 KPQNLLINREGELKIADFGLAR 148
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 75/172 (43%), Gaps = 33/172 (19%)
Query: 498 NVAMKVANLKQKEAS--RSFAAEFNALRNIRHRNLIKIITICSS-------IDF----EG 544
VA+K+ + Q +S + E ++ + H N++K+ + + +++ E
Sbjct: 41 EVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEV 100
Query: 545 FDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVV 604
FD+ +++G+++ R + A++Y Q IVH DLK N+LLD D+
Sbjct: 101 FDY-LVAHGRMKEKEARAKFR-----QIVSAVQYCH---QKFIVHRDLKAENLLLDADMN 151
Query: 605 THVGDLGLA-KFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENRE 655
+ D G + +F +G + T G+ Y AP + + + E
Sbjct: 152 IKIADFGFSNEFTFGNKLDTFC----------GSPPYAAPELFQGKKYDGPE 193
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 36.6 bits (83), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 50/116 (43%), Gaps = 14/116 (12%)
Query: 514 SFAAEFNALRNIRHRNLIKIITICSSIDFEG---FDFKAISNGQLR------LCNLSLTQ 564
F E +++ H N++ ++ IC + EG + +G LR N ++
Sbjct: 82 QFLTEGIIMKDFSHPNVLSLLGIC--LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD 139
Query: 565 RVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620
+ + VA +++L VH DL N +LD+ V D GLA+ +Y E
Sbjct: 140 LIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 192
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 36.6 bits (83), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 10/64 (15%)
Query: 587 IVHGDLKPSNILLDQDVVTHVGDLGLA-KFLYGYEPGTTAETASSSIGINGTVGYVAPVI 645
++H DLK N+ L++D+ +GD GLA K Y E T + GT Y+AP +
Sbjct: 142 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT---------LCGTPNYIAPEV 192
Query: 646 IAAR 649
++ +
Sbjct: 193 LSKK 196
>pdb|3M18|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R2.1 In Complex With Hen Egg Lysozyme
Length = 251
Score = 36.6 bits (83), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 60/146 (41%), Gaps = 19/146 (13%)
Query: 149 FSRLKNLSWLNLGVNNLGSGTANELDFINLL------------------TNCSKLERLYF 190
F L L+WLNL N L + +A D + L + ++L++LY
Sbjct: 55 FRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYL 114
Query: 191 NRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPP 250
N + LP + + + +K++ + +N++ S L NL L++ ++QL
Sbjct: 115 GGNQLKS-LPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHG 173
Query: 251 LIGETPNLQLLNIGGNHLQGSILSSL 276
LQ + + GN S +L
Sbjct: 174 AFDRLGKLQTITLFGNQFDCSRCETL 199
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 72/173 (41%), Gaps = 25/173 (14%)
Query: 490 EGGFNIVY---------NVAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSI 540
+G + IVY +A+K + S+ E ++++H+N+++ + S
Sbjct: 32 KGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSEN 91
Query: 541 DFEGFDFKAISNGQL------RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKP 594
F + + G L + L ++ I +E L++ IVH D+K
Sbjct: 92 GFIKIFMEQVPGGSLSALLRSKWGPLKDNEQT-IGFYTKQILEGLKYLHDNQIVHRDIKG 150
Query: 595 SNILLDQ-DVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVII 646
N+L++ V + D G +K L G P T T GT+ Y+AP II
Sbjct: 151 DNVLINTYSGVLKISDFGTSKRLAGINPCTETFT--------GTLQYMAPEII 195
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 86/208 (41%), Gaps = 38/208 (18%)
Query: 463 MKQQFPMISHAELSKAT-------NNFSPANKIREGGFNIVYNV--AMKVANLKQKEASR 513
M Q+ P EL+K N SP G ++ ++VA K+ SR
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVA---VKKLSR 57
Query: 514 SFAA---------EFNALRNIRHRNLIKIITICS-SIDFEGF-DFKAISNGQ-LRLCNLS 561
F + E L++++H N+I ++ + + + E F D +++ L N+
Sbjct: 58 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 117
Query: 562 LTQRV---NIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618
Q++ ++ + + L++ I+H DLKPSN+ +++D + D GLA+
Sbjct: 118 KXQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR---- 173
Query: 619 YEPGTTAETASSSIGINGTVGYVAPVII 646
T G T Y AP I+
Sbjct: 174 -------HTDDEMTGYVATRWYRAPEIM 194
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 36.6 bits (83), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 71/191 (37%), Gaps = 27/191 (14%)
Query: 480 NNFSPANKIREGGFNIVY-----NVAMKVANLKQKEASRSFAAEFNALRNIR------HR 528
+ KI EG + +V+ + VA K E+ + ALR IR H
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHP 62
Query: 529 NLIKIITICSSIDFEGFDFKAISNGQLRLCNLSLTQR-------VNIAIDVAFAIEYLRH 581
NL+ ++ + F+ + L L QR +I A+ +
Sbjct: 63 NLVNLLEVFRRKRRLHLVFEYCDHTVLH--ELDRYQRGVPEHLVKSITWQTLQAVNFCHK 120
Query: 582 HCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG----YEPGTTAETASSSIGINGT 637
H + +H D+KP NIL+ + V + D G A+ L G Y+ S + G
Sbjct: 121 H---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGD 177
Query: 638 VGYVAPVIIAA 648
Y PV + A
Sbjct: 178 TQYGPPVDVWA 188
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 36.6 bits (83), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 38/82 (46%), Gaps = 10/82 (12%)
Query: 566 VNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTA 625
+ + +DV + YL C ++H DL N L+ ++ V V D G+ +F+
Sbjct: 107 LGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVGENQVIKVSDFGMTRFVLD------- 156
Query: 626 ETASSSIGINGTVGYVAPVIIA 647
+ +SS G V + +P + +
Sbjct: 157 DQYTSSTGTKFPVKWASPEVFS 178
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 36.6 bits (83), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 86/208 (41%), Gaps = 38/208 (18%)
Query: 463 MKQQFPMISHAELSKAT-------NNFSPANKIREGGFNIVYNV--AMKVANLKQKEASR 513
M Q+ P EL+K N SP G ++ ++VA K+ SR
Sbjct: 21 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVA---VKKLSR 77
Query: 514 SFAA---------EFNALRNIRHRNLIKIITICS-SIDFEGF-DFKAISNGQ-LRLCNLS 561
F + E L++++H N+I ++ + + + E F D +++ L N+
Sbjct: 78 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 137
Query: 562 LTQRV---NIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618
Q++ ++ + + L++ I+H DLKPSN+ +++D + D GLA+
Sbjct: 138 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---- 193
Query: 619 YEPGTTAETASSSIGINGTVGYVAPVII 646
T G T Y AP I+
Sbjct: 194 -------HTDDEMTGYVATRWYRAPEIM 214
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 36.6 bits (83), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 50/116 (43%), Gaps = 14/116 (12%)
Query: 514 SFAAEFNALRNIRHRNLIKIITICSSIDFEG---FDFKAISNGQLR------LCNLSLTQ 564
F E +++ H N++ ++ IC + EG + +G LR N ++
Sbjct: 77 QFLTEGIIMKDFSHPNVLSLLGIC--LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD 134
Query: 565 RVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620
+ + VA +++L VH DL N +LD+ V D GLA+ +Y E
Sbjct: 135 LIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 187
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 36.6 bits (83), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 86/208 (41%), Gaps = 38/208 (18%)
Query: 463 MKQQFPMISHAELSKAT-------NNFSPANKIREGGFNIVYNV--AMKVANLKQKEASR 513
M Q+ P EL+K N SP G ++ ++VA K+ SR
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVA---VKKLSR 57
Query: 514 SFAA---------EFNALRNIRHRNLIKIITICS-SIDFEGF-DFKAISNGQ-LRLCNLS 561
F + E L++++H N+I ++ + + + E F D +++ L N+
Sbjct: 58 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 117
Query: 562 LTQRV---NIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618
Q++ ++ + + L++ I+H DLKPSN+ +++D + D GLA+
Sbjct: 118 KXQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---- 173
Query: 619 YEPGTTAETASSSIGINGTVGYVAPVII 646
T G T Y AP I+
Sbjct: 174 -------HTDDEMTGYVATRWYRAPEIM 194
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 36.6 bits (83), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 50/116 (43%), Gaps = 14/116 (12%)
Query: 514 SFAAEFNALRNIRHRNLIKIITICSSIDFEG---FDFKAISNGQLR------LCNLSLTQ 564
F E +++ H N++ ++ IC + EG + +G LR N ++
Sbjct: 78 QFLTEGIIMKDFSHPNVLSLLGIC--LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD 135
Query: 565 RVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620
+ + VA +++L VH DL N +LD+ V D GLA+ +Y E
Sbjct: 136 LIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 188
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 36.6 bits (83), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 60/147 (40%), Gaps = 26/147 (17%)
Query: 494 NIVYNVAMKVANLKQKEASRS-FAAEFNALRNI-RHRNLIKIITICSSIDFEGFDFKAIS 551
N V VA+K+ E S +E ++ I +H+N+I ++ C+ + S
Sbjct: 58 NRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 117
Query: 552 NGQLR------------LC---------NLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHG 590
G LR C LS V+ A VA +EYL +H
Sbjct: 118 KGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHR 174
Query: 591 DLKPSNILLDQDVVTHVGDLGLAKFLY 617
DL N+L+ +D V + D GLA+ ++
Sbjct: 175 DLAARNVLVTEDNVMKIADFGLARDIH 201
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 36.6 bits (83), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 86/208 (41%), Gaps = 38/208 (18%)
Query: 463 MKQQFPMISHAELSKAT-------NNFSPANKIREGGFNIVYNV--AMKVANLKQKEASR 513
M Q+ P EL+K N SP G ++ ++VA K+ SR
Sbjct: 20 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVA---VKKLSR 76
Query: 514 SFAA---------EFNALRNIRHRNLIKIITICS-SIDFEGF-DFKAISNGQ-LRLCNLS 561
F + E L++++H N+I ++ + + + E F D +++ L N+
Sbjct: 77 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 136
Query: 562 LTQRV---NIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618
Q++ ++ + + L++ I+H DLKPSN+ +++D + D GLA+
Sbjct: 137 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---- 192
Query: 619 YEPGTTAETASSSIGINGTVGYVAPVII 646
T G T Y AP I+
Sbjct: 193 -------HTDDEMTGYVATRWYRAPEIM 213
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 36.6 bits (83), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 584 QPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
+ I+H DLKP+N LL+QD + D GLA+
Sbjct: 149 ESGIIHRDLKPANCLLNQDCSVKICDFGLAR 179
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 36.6 bits (83), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 86/208 (41%), Gaps = 38/208 (18%)
Query: 463 MKQQFPMISHAELSKAT-------NNFSPANKIREGGFNIVYNV--AMKVANLKQKEASR 513
M Q+ P EL+K N SP G ++ ++VA K+ SR
Sbjct: 3 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVA---VKKLSR 59
Query: 514 SFAA---------EFNALRNIRHRNLIKIITICS-SIDFEGF-DFKAISNGQ-LRLCNLS 561
F + E L++++H N+I ++ + + + E F D +++ L N+
Sbjct: 60 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 119
Query: 562 LTQRV---NIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618
Q++ ++ + + L++ I+H DLKPSN+ +++D + D GLA+
Sbjct: 120 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---- 175
Query: 619 YEPGTTAETASSSIGINGTVGYVAPVII 646
T G T Y AP I+
Sbjct: 176 -------HTDDEMTGYVATRWYRAPEIM 196
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 36.6 bits (83), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 80/196 (40%), Gaps = 37/196 (18%)
Query: 471 SHAELSK--ATNNFSPANKIREGGFNIVYNVAMKVANLKQKEASR------SFAAEFNAL 522
H E+ + + F+ K R+ G Y A K ++ +SR E N L
Sbjct: 26 DHYEMGEELGSGQFAIVRKCRQKGTGKEY--AAKFIKKRRLXSSRRGVSREEIEREVNIL 83
Query: 523 RNIRHRNLIKIITICSSIDFEGFDFKAISNGQL--------RLCNLSLTQRVNIAIDVAF 574
R IRH N+I + I + + +S G+L L TQ + +D
Sbjct: 84 REIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILD--- 140
Query: 575 AIEYLRHHCQPSIVHGDLKPSNI-LLDQDV---VTHVGDLGLAKFLYGYEPGTTAETASS 630
+ YL H + I H DLKP NI LLD++V + D G+A + E +
Sbjct: 141 GVHYL--HSK-RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI---------EAGNE 188
Query: 631 SIGINGTVGYVAPVII 646
I GT +VAP I+
Sbjct: 189 FKNIFGTPEFVAPEIV 204
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 36.6 bits (83), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 77/194 (39%), Gaps = 55/194 (28%)
Query: 491 GGFNIVYNV---------AMKVANLKQKEASRSFAAEFNALRNIRHRNLIKI-------- 533
G F VY A KV + K +E + E + L + H N++K+
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYEN 80
Query: 534 -----ITICS--SIDFEGFDF-KAISNGQLRL-CNLSLTQRVNIAIDVAFAIEYLRHHCQ 584
I C+ ++D + + ++ Q+++ C +L A+ YL +
Sbjct: 81 NLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLD-----------ALNYLHDN-- 127
Query: 585 PSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSI----GINGTVGY 640
I+H DLK NIL D GD+ LA F G +A+ + I GT +
Sbjct: 128 -KIIHRDLKAGNILFTLD-----GDIKLADF------GVSAKNTRTXIQRRDSFIGTPYW 175
Query: 641 VAPVIIAARNLENR 654
+AP ++ ++R
Sbjct: 176 MAPEVVMCETSKDR 189
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 36.6 bits (83), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 86/208 (41%), Gaps = 38/208 (18%)
Query: 463 MKQQFPMISHAELSKAT-------NNFSPANKIREGGFNIVYNV--AMKVANLKQKEASR 513
M Q+ P EL+K N SP G ++ ++VA K+ SR
Sbjct: 12 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVA---VKKLSR 68
Query: 514 SFAA---------EFNALRNIRHRNLIKIITICS-SIDFEGF-DFKAISNGQ-LRLCNLS 561
F + E L++++H N+I ++ + + + E F D +++ L N+
Sbjct: 69 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 128
Query: 562 LTQRV---NIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618
Q++ ++ + + L++ I+H DLKPSN+ +++D + D GLA+
Sbjct: 129 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR---- 184
Query: 619 YEPGTTAETASSSIGINGTVGYVAPVII 646
T G T Y AP I+
Sbjct: 185 -------HTDDEMTGYVATRWYRAPEIM 205
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 36.6 bits (83), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 80/196 (40%), Gaps = 37/196 (18%)
Query: 471 SHAELSK--ATNNFSPANKIREGGFNIVYNVAMKVANLKQKEASR------SFAAEFNAL 522
H E+ + + F+ K R+ G Y A K ++ +SR E N L
Sbjct: 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEY--AAKFIKKRRLSSSRRGVSREEIEREVNIL 62
Query: 523 RNIRHRNLIKIITICSSIDFEGFDFKAISNGQL--------RLCNLSLTQRVNIAIDVAF 574
R IRH N+I + I + + +S G+L L TQ + +D
Sbjct: 63 REIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILD--- 119
Query: 575 AIEYLRHHCQPSIVHGDLKPSNI-LLDQDV---VTHVGDLGLAKFLYGYEPGTTAETASS 630
+ YL H + I H DLKP NI LLD++V + D G+A + E +
Sbjct: 120 GVHYL--HSK-RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI---------EAGNE 167
Query: 631 SIGINGTVGYVAPVII 646
I GT +VAP I+
Sbjct: 168 FKNIFGTPEFVAPEIV 183
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 86/208 (41%), Gaps = 38/208 (18%)
Query: 463 MKQQFPMISHAELSKAT-------NNFSPANKIREGGFNIVYNV--AMKVANLKQKEASR 513
M Q+ P EL+K N SP G ++ ++VA K+ SR
Sbjct: 12 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVA---VKKLSR 68
Query: 514 SFAA---------EFNALRNIRHRNLIKIITICS-SIDFEGF-DFKAISNGQ-LRLCNLS 561
F + E L++++H N+I ++ + + + E F D +++ L N+
Sbjct: 69 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 128
Query: 562 LTQRV---NIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618
Q++ ++ + + L++ I+H DLKPSN+ +++D + D GLA+
Sbjct: 129 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---- 184
Query: 619 YEPGTTAETASSSIGINGTVGYVAPVII 646
T G T Y AP I+
Sbjct: 185 -------HTDDEMTGYVATRWYRAPEIM 205
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 86/208 (41%), Gaps = 38/208 (18%)
Query: 463 MKQQFPMISHAELSKAT-------NNFSPANKIREGGFNIVYNV--AMKVANLKQKEASR 513
M Q+ P EL+K N SP G ++ ++VA K+ SR
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVA---VKKLSR 57
Query: 514 SFAA---------EFNALRNIRHRNLIKIITICS-SIDFEGF-DFKAISNGQ-LRLCNLS 561
F + E L++++H N+I ++ + + + E F D +++ L N+
Sbjct: 58 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 117
Query: 562 LTQRV---NIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618
Q++ ++ + + L++ I+H DLKPSN+ +++D + D GLA+
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---- 173
Query: 619 YEPGTTAETASSSIGINGTVGYVAPVII 646
T G T Y AP I+
Sbjct: 174 -------HTDDEMTGYVATRWYRAPEIM 194
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 36.2 bits (82), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 50/116 (43%), Gaps = 14/116 (12%)
Query: 514 SFAAEFNALRNIRHRNLIKIITICSSIDFEG---FDFKAISNGQLR------LCNLSLTQ 564
F E +++ H N++ ++ IC + EG + +G LR N ++
Sbjct: 77 QFLTEGIIMKDFSHPNVLSLLGIC--LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD 134
Query: 565 RVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620
+ + VA +++L VH DL N +LD+ V D GLA+ +Y E
Sbjct: 135 LIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 187
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 36.2 bits (82), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 30/134 (22%), Positives = 58/134 (43%), Gaps = 32/134 (23%)
Query: 513 RSFAAEFNALRNIRHRNLIKIITICSS-------IDF------EGF--DFKAISNGQLRL 557
R +EFN L+ + H ++IK+ CS +++ GF + + + G L
Sbjct: 71 RDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGS 130
Query: 558 CN--------------LSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDV 603
L++ ++ A ++ ++YL + S+VH DL NIL+ +
Sbjct: 131 GGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGR 187
Query: 604 VTHVGDLGLAKFLY 617
+ D GL++ +Y
Sbjct: 188 KMKISDFGLSRDVY 201
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 36.2 bits (82), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 86/208 (41%), Gaps = 38/208 (18%)
Query: 463 MKQQFPMISHAELSKAT-------NNFSPANKIREGGFNIVYNV--AMKVANLKQKEASR 513
M Q+ P EL+K N SP G ++ ++VA K+ SR
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVA---VKKLSR 57
Query: 514 SFAA---------EFNALRNIRHRNLIKIITICS-SIDFEGF-DFKAISNGQ-LRLCNLS 561
F + E L++++H N+I ++ + + + E F D +++ L N+
Sbjct: 58 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 117
Query: 562 LTQRV---NIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618
Q++ ++ + + L++ I+H DLKPSN+ +++D + D GLA+
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---- 173
Query: 619 YEPGTTAETASSSIGINGTVGYVAPVII 646
T G T Y AP I+
Sbjct: 174 -------HTDDEMTGYVATRWYRAPEIM 194
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 36.2 bits (82), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 50/116 (43%), Gaps = 14/116 (12%)
Query: 514 SFAAEFNALRNIRHRNLIKIITICSSIDFEG---FDFKAISNGQLR------LCNLSLTQ 564
F E +++ H N++ ++ IC + EG + +G LR N ++
Sbjct: 75 QFLTEGIIMKDFSHPNVLSLLGIC--LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD 132
Query: 565 RVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620
+ + VA +++L VH DL N +LD+ V D GLA+ +Y E
Sbjct: 133 LIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 185
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 36.2 bits (82), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 86/208 (41%), Gaps = 38/208 (18%)
Query: 463 MKQQFPMISHAELSKAT-------NNFSPANKIREGGFNIVYNV--AMKVANLKQKEASR 513
M Q+ P EL+K N SP G ++ ++VA K+ SR
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVA---VKKLSR 57
Query: 514 SFAA---------EFNALRNIRHRNLIKIITICS-SIDFEGF-DFKAISNGQ-LRLCNLS 561
F + E L++++H N+I ++ + + + E F D +++ L N+
Sbjct: 58 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 117
Query: 562 LTQRV---NIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618
Q++ ++ + + L++ I+H DLKPSN+ +++D + D GLA+
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---- 173
Query: 619 YEPGTTAETASSSIGINGTVGYVAPVII 646
T G T Y AP I+
Sbjct: 174 -------HTDDEMTGYVATRWYRAPEIM 194
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 36.2 bits (82), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 60/147 (40%), Gaps = 26/147 (17%)
Query: 494 NIVYNVAMKVANLKQKEASRS-FAAEFNALRNI-RHRNLIKIITICSSIDFEGFDFKAIS 551
N V VA+K+ E S +E ++ I +H+N+I ++ C+ + S
Sbjct: 43 NRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 102
Query: 552 NGQLR------------LC---------NLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHG 590
G LR C LS V+ A VA +EYL +H
Sbjct: 103 KGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHR 159
Query: 591 DLKPSNILLDQDVVTHVGDLGLAKFLY 617
DL N+L+ +D V + D GLA+ ++
Sbjct: 160 DLAARNVLVTEDNVMKIADFGLARDIH 186
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 36.2 bits (82), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 86/208 (41%), Gaps = 38/208 (18%)
Query: 463 MKQQFPMISHAELSKAT-------NNFSPANKIREGGFNIVYNV--AMKVANLKQKEASR 513
M Q+ P EL+K N SP G ++ ++VA K+ SR
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVA---VKKLSR 57
Query: 514 SFAA---------EFNALRNIRHRNLIKIITICS-SIDFEGF-DFKAISNGQ-LRLCNLS 561
F + E L++++H N+I ++ + + + E F D +++ L N+
Sbjct: 58 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 117
Query: 562 LTQRV---NIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618
Q++ ++ + + L++ I+H DLKPSN+ +++D + D GLA+
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---- 173
Query: 619 YEPGTTAETASSSIGINGTVGYVAPVII 646
T G T Y AP I+
Sbjct: 174 -------HTDDEMTGYVATRWYRAPEIM 194
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 36.2 bits (82), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 66/135 (48%), Gaps = 23/135 (17%)
Query: 497 YNVAMKVA--NLKQKEAS-RSFAAEFNALRNIRHRNLIKI---------ITICSSIDFEG 544
YN + KVA LK S ++F E N ++ ++H L+++ I I + +G
Sbjct: 34 YNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKG 93
Query: 545 --FDF-KAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQ 601
DF K+ G++ L L ++ + +A + Y+ + +H DL+ +N+L+ +
Sbjct: 94 SLLDFLKSDEGGKVLLPKL-----IDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSE 145
Query: 602 DVVTHVGDLGLAKFL 616
++ + D GLA+ +
Sbjct: 146 SLMCKIADFGLARVI 160
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 36.2 bits (82), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 86/208 (41%), Gaps = 38/208 (18%)
Query: 463 MKQQFPMISHAELSKAT-------NNFSPANKIREGGFNIVYNV--AMKVANLKQKEASR 513
M Q+ P EL+K N SP G ++ ++VA K+ SR
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVA---VKKLSR 57
Query: 514 SFAA---------EFNALRNIRHRNLIKIITICS-SIDFEGF-DFKAISNGQ-LRLCNLS 561
F + E L++++H N+I ++ + + + E F D +++ L N+
Sbjct: 58 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 117
Query: 562 LTQRV---NIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618
Q++ ++ + + L++ I+H DLKPSN+ +++D + D GLA+
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---- 173
Query: 619 YEPGTTAETASSSIGINGTVGYVAPVII 646
T G T Y AP I+
Sbjct: 174 -------HTDDEMTGYVATRWYRAPEIM 194
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 36.2 bits (82), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 64/135 (47%), Gaps = 23/135 (17%)
Query: 498 NVAMKVANLKQKEAS--RSFAAEFNALRNIRHRNLIKIITICSS-------IDF----EG 544
VA+K+ + Q +S + E ++ + H N++K+ + + +++ E
Sbjct: 41 EVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEV 100
Query: 545 FDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVV 604
FD+ +++G+++ R + A++Y Q IVH DLK N+LLD D+
Sbjct: 101 FDY-LVAHGRMKEKEARAKFR-----QIVSAVQYCH---QKFIVHRDLKAENLLLDADMN 151
Query: 605 THVGDLGLA-KFLYG 618
+ D G + +F +G
Sbjct: 152 IKIADFGFSNEFTFG 166
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 36.2 bits (82), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 86/208 (41%), Gaps = 38/208 (18%)
Query: 463 MKQQFPMISHAELSKAT-------NNFSPANKIREGGFNIVYNV--AMKVANLKQKEASR 513
M Q+ P EL+K N SP G ++ ++VA K+ SR
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVA---VKKLSR 57
Query: 514 SFAA---------EFNALRNIRHRNLIKIITICS-SIDFEGF-DFKAISNGQ-LRLCNLS 561
F + E L++++H N+I ++ + + + E F D +++ L N+
Sbjct: 58 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 117
Query: 562 LTQRV---NIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618
Q++ ++ + + L++ I+H DLKPSN+ +++D + D GLA+
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---- 173
Query: 619 YEPGTTAETASSSIGINGTVGYVAPVII 646
T G T Y AP I+
Sbjct: 174 -------HTDDEMTGYVATRWYRAPEIM 194
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 36.2 bits (82), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 73/182 (40%), Gaps = 28/182 (15%)
Query: 488 IREGGFNIVY--------NVAMKVA-----NLKQKEASRSFAAEFNALRNIRHRNLIKII 534
I EG F V+ N AM VA N F E +R H +++K+I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 535 TICSS----IDFEGFDFKAI-SNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVH 589
+ + I E + S Q+R +L L + A ++ A+ YL VH
Sbjct: 78 GVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK---RFVH 134
Query: 590 GDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAAR 649
D+ N+L+ + +GD GL++++ E T + + + I ++AP I R
Sbjct: 135 RDIAARNVLVSSNDCVKLGDFGLSRYM---EDSTXXKASKGKLPIK----WMAPESINFR 187
Query: 650 NL 651
Sbjct: 188 RF 189
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 36.2 bits (82), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 61/147 (41%), Gaps = 14/147 (9%)
Query: 505 NLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQL--RLCNLSL 562
+KQK S E L+ + H N++K+ + + + G+L + +
Sbjct: 63 QVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR 122
Query: 563 TQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLD---QDVVTHVGDLGLAKFLYGY 619
V+ A + + + + + IVH DLKP N+LL+ +D + D GL+
Sbjct: 123 FSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS------ 176
Query: 620 EPGTTAETASSSIGINGTVGYVAPVII 646
T E + GT Y+AP ++
Sbjct: 177 ---THFEASKKMKDKIGTAYYIAPEVL 200
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 36.2 bits (82), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 7/63 (11%)
Query: 584 QPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAP 643
Q IVH DLKP+N L+ D + + D G+A + +P TT+ S + GTV Y+ P
Sbjct: 126 QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQM---QPDTTSVVKDSQV---GTVNYMPP 178
Query: 644 VII 646
I
Sbjct: 179 EAI 181
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 36.2 bits (82), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 60/145 (41%), Gaps = 14/145 (9%)
Query: 513 RSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLRL------CNLSLTQRV 566
R F +E + + H N+I + + + + + NG L ++ Q V
Sbjct: 54 RDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLV 113
Query: 567 NIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAE 626
+ + ++YL S VH DL NIL++ ++V V D G+++ L E
Sbjct: 114 GMLRGIGSGMKYLSDM---SYVHRDLAARNILVNSNLVCKVSDFGMSRVLE-----DDPE 165
Query: 627 TASSSIGINGTVGYVAPVIIAARNL 651
A ++ G + + AP IA R
Sbjct: 166 AAYTTRGGKIPIRWTAPEAIAYRKF 190
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 36.2 bits (82), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 38/187 (20%), Positives = 76/187 (40%), Gaps = 24/187 (12%)
Query: 476 SKATNNFSPANKIREGGFNIV---------YNVAMKVANLKQKEA--SRSFAAEFNALRN 524
++ T + ++ +G F++V A + N K+ A + E R
Sbjct: 7 TRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRL 66
Query: 525 IRHRNLIKIITICSSIDFEGFDFKAISNGQL--RLCNLSLTQRVNIAIDVAFAIEYLRHH 582
++H N++++ S F ++ G+L + + + + +E + H
Sbjct: 67 LKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHC 126
Query: 583 CQPSIVHGDLKPSNILLD---QDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVG 639
Q +VH +LKP N+LL + + D GLA + G + + G GT G
Sbjct: 127 HQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ--------QAWFGFAGTPG 178
Query: 640 YVAPVII 646
Y++P ++
Sbjct: 179 YLSPEVL 185
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 36.2 bits (82), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 62/148 (41%), Gaps = 20/148 (13%)
Query: 513 RSFAAEFNALRNIRHRNLIK---IITICSSIDFEGFDFKAISNGQLRLC------NLSLT 563
R F +E + + H N+I ++T C + + + NG L ++
Sbjct: 75 RDFLSEASIMGQFDHPNIIHLEGVVTKCKPV---MIITEYMENGSLDAFLRKNDGRFTVI 131
Query: 564 QRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623
Q V + + ++YL S VH DL NIL++ ++V V D G+++ L
Sbjct: 132 QLVGMLRGIGSGMKYLSDM---SAVHRDLAARNILVNSNLVCKVSDFGMSRVLE-----D 183
Query: 624 TAETASSSIGINGTVGYVAPVIIAARNL 651
E A ++ G + + AP IA R
Sbjct: 184 DPEAAYTTRGGKIPIRWTAPEAIAYRKF 211
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 36.2 bits (82), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 86/208 (41%), Gaps = 38/208 (18%)
Query: 463 MKQQFPMISHAELSKAT-------NNFSPANKIREGGFNIVYNV--AMKVANLKQKEASR 513
M Q+ P EL+K N SP G ++ ++VA K+ SR
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVA---VKKLSR 57
Query: 514 SFAA---------EFNALRNIRHRNLIKIITICS-SIDFEGF-DFKAISNGQ-LRLCNLS 561
F + E L++++H N+I ++ + + + E F D +++ L N+
Sbjct: 58 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 117
Query: 562 LTQRV---NIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618
Q++ ++ + + L++ I+H DLKPSN+ +++D + D GLA+
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---- 173
Query: 619 YEPGTTAETASSSIGINGTVGYVAPVII 646
T G T Y AP I+
Sbjct: 174 -------HTDDEMTGXVATRWYRAPEIM 194
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 36.2 bits (82), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 72/173 (41%), Gaps = 25/173 (14%)
Query: 490 EGGFNIVY---------NVAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSI 540
+G + IVY +A+K + S+ E ++++H+N+++ + S
Sbjct: 18 KGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSEN 77
Query: 541 DFEGFDFKAISNGQL------RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKP 594
F + + G L + L ++ I +E L++ IVH D+K
Sbjct: 78 GFIKIFMEQVPGGSLSALLRSKWGPLKDNEQT-IGFYTKQILEGLKYLHDNQIVHRDIKG 136
Query: 595 SNILLDQ-DVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVII 646
N+L++ V + D G +K L G P T T GT+ Y+AP II
Sbjct: 137 DNVLINTYSGVLKISDFGTSKRLAGINPCTETFT--------GTLQYMAPEII 181
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 36.2 bits (82), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 38/81 (46%), Gaps = 16/81 (19%)
Query: 568 IAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAET 627
IAID + Y VH D+KP NIL+D + + D G L E G T
Sbjct: 186 IAIDSVHQLHY---------VHRDIKPDNILMDMNGHIRLADFGSC--LKLMEDG----T 230
Query: 628 ASSSIGINGTVGYVAPVIIAA 648
SS+ + GT Y++P I+ A
Sbjct: 231 VQSSVAV-GTPDYISPEILQA 250
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 36.2 bits (82), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 62/148 (41%), Gaps = 20/148 (13%)
Query: 513 RSFAAEFNALRNIRHRNLIK---IITICSSIDFEGFDFKAISNGQLRL------CNLSLT 563
R F +E + + H N+I ++T C + + + NG L ++
Sbjct: 60 RDFLSEASIMGQFDHPNIIHLEGVVTKCKPV---MIITEYMENGSLDAFLRKNDGRFTVI 116
Query: 564 QRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623
Q V + + ++YL S VH DL NIL++ ++V V D G+++ L
Sbjct: 117 QLVGMLRGIGSGMKYLSDM---SYVHRDLAARNILVNSNLVCKVSDFGMSRVLE-----D 168
Query: 624 TAETASSSIGINGTVGYVAPVIIAARNL 651
E A ++ G + + AP IA R
Sbjct: 169 DPEAAYTTRGGKIPIRWTAPEAIAYRKF 196
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 36.2 bits (82), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 69/149 (46%), Gaps = 28/149 (18%)
Query: 486 NKIREGGFNIVYN---------VAMKVANLKQKEASRSFA-AEFNALRNIRHRNLIKIIT 535
+K+ EG + VY VA+K L+ +E + A E + L++++H N++ +
Sbjct: 8 DKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHD 67
Query: 536 ICSS-------IDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLR--HHC-QP 585
I + ++ D K + + N+ N+ + F + LR +C +
Sbjct: 68 IIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMH-----NVKL---FLFQLLRGLAYCHRQ 119
Query: 586 SIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
++H DLKP N+L+++ + D GLA+
Sbjct: 120 KVLHRDLKPQNLLINERGELKLADFGLAR 148
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 36.2 bits (82), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 86/208 (41%), Gaps = 38/208 (18%)
Query: 463 MKQQFPMISHAELSKAT-------NNFSPANKIREGGFNIVYNV--AMKVANLKQKEASR 513
M Q+ P EL+K N SP G ++ ++VA K+ SR
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVA---VKKLSR 57
Query: 514 SFAA---------EFNALRNIRHRNLIKIITICS-SIDFEGF-DFKAISNGQ-LRLCNLS 561
F + E L++++H N+I ++ + + + E F D +++ L N+
Sbjct: 58 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 117
Query: 562 LTQRV---NIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618
Q++ ++ + + L++ I+H DLKPSN+ +++D + D GLA+
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---- 173
Query: 619 YEPGTTAETASSSIGINGTVGYVAPVII 646
T G T Y AP I+
Sbjct: 174 -------HTDDEMTGYVATRWYRAPEIM 194
>pdb|3M19|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
pdb|3M19|B Chain B, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
Length = 251
Score = 36.2 bits (82), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 58/141 (41%), Gaps = 19/141 (13%)
Query: 149 FSRLKNLSWLNLGVNNLGSGTANELDFINLL------------------TNCSKLERLYF 190
F L L+WLNL N L + +A D + L + ++L++LY
Sbjct: 55 FRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYL 114
Query: 191 NRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPP 250
N + LP + + + +K++ + +N++ S L NL L++ ++QL
Sbjct: 115 GGNQLKS-LPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHG 173
Query: 251 LIGETPNLQLLNIGGNHLQGS 271
LQ + + GN S
Sbjct: 174 AFDRLGKLQTITLFGNQFDCS 194
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 36.2 bits (82), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 7/63 (11%)
Query: 584 QPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAP 643
Q IVH DLKP+N L+ D + + D G+A + +P TT+ S + GTV Y+ P
Sbjct: 145 QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQM---QPDTTSVVKDSQV---GTVNYMPP 197
Query: 644 VII 646
I
Sbjct: 198 EAI 200
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 36.2 bits (82), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 74/172 (43%), Gaps = 33/172 (19%)
Query: 498 NVAMKVANLKQKEAS--RSFAAEFNALRNIRHRNLIKIITICSS-------IDF----EG 544
VA+K+ + Q +S + E ++ + H N++K+ + + +++ E
Sbjct: 34 EVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEV 93
Query: 545 FDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVV 604
FD+ +++G ++ R + A++Y Q IVH DLK N+LLD D+
Sbjct: 94 FDY-LVAHGWMKEKEARAKFR-----QIVSAVQYCH---QKFIVHRDLKAENLLLDADMN 144
Query: 605 THVGDLGLA-KFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENRE 655
+ D G + +F +G + T G+ Y AP + + + E
Sbjct: 145 IKIADFGFSNEFTFGNKLDTFC----------GSPPYAAPELFQGKKYDGPE 186
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 36.2 bits (82), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 66/142 (46%), Gaps = 18/142 (12%)
Query: 511 ASRSFAAEFNALRNIRHRNLIKIITICS-SIDFEGF-DFKAISNGQ-LRLCNLSLTQRV- 566
A R++ E L++++H N+I ++ + + + E F D +++ L N+ Q++
Sbjct: 94 AKRTYR-ELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLT 152
Query: 567 --NIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTT 624
++ + + L++ I+H DLKPSN+ +++D + D GLA+
Sbjct: 153 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---------- 202
Query: 625 AETASSSIGINGTVGYVAPVII 646
T G T Y AP I+
Sbjct: 203 -HTDDEMTGYVATRWYRAPEIM 223
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 35.8 bits (81), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 59/147 (40%), Gaps = 26/147 (17%)
Query: 494 NIVYNVAMKVANLKQKEASRS-FAAEFNALRNI-RHRNLIKIITICSSIDFEGFDFKAIS 551
N V VA+K+ E S +E ++ I +H+N+I ++ C+ + S
Sbjct: 99 NRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 158
Query: 552 NGQLRLC---------------------NLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHG 590
G LR LS V+ A VA +EYL +H
Sbjct: 159 KGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHR 215
Query: 591 DLKPSNILLDQDVVTHVGDLGLAKFLY 617
DL N+L+ +D V + D GLA+ ++
Sbjct: 216 DLAARNVLVTEDNVMKIADFGLARDIH 242
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 35.8 bits (81), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 7/63 (11%)
Query: 584 QPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAP 643
Q IVH DLKP+N L+ D + + D G+A + +P TT+ S + GTV Y+ P
Sbjct: 129 QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQM---QPDTTSVVKDSQV---GTVNYMPP 181
Query: 644 VII 646
I
Sbjct: 182 EAI 184
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 35.8 bits (81), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 95/207 (45%), Gaps = 29/207 (14%)
Query: 453 PAHKDSNMLSMKQ----QFPMISHAELSKATNNFSPANKIREG--GFNIVYNVAMKVANL 506
PA D +++ KQ F +S E+ F +K E G + + +K +
Sbjct: 70 PAPFDHRIVTAKQGAVNSFYTVSKTEIL-GGGRFGQVHKCEETATGLKLAAKI-IKTRGM 127
Query: 507 KQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQL--RLCNLS--L 562
K KE ++ E + + + H NLI++ S + + + G+L R+ + S L
Sbjct: 128 KDKEEVKN---EISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNL 184
Query: 563 TQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNIL-LDQDVVT-HVGDLGLAKFLYGYE 620
T+ ++ + + E +RH Q I+H DLKP NIL +++D + D GLA+ Y+
Sbjct: 185 TE-LDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLAR---RYK 240
Query: 621 PGTTAETASSSIGIN-GTVGYVAPVII 646
P + +N GT ++AP ++
Sbjct: 241 P-------REKLKVNFGTPEFLAPEVV 260
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 35.8 bits (81), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 61/147 (41%), Gaps = 14/147 (9%)
Query: 505 NLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQL--RLCNLSL 562
+KQK S E L+ + H N++K+ + + + G+L + +
Sbjct: 87 QVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR 146
Query: 563 TQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLD---QDVVTHVGDLGLAKFLYGY 619
V+ A + + + + + IVH DLKP N+LL+ +D + D GL+
Sbjct: 147 FSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS------ 200
Query: 620 EPGTTAETASSSIGINGTVGYVAPVII 646
T E + GT Y+AP ++
Sbjct: 201 ---THFEASKKMKDKIGTAYYIAPEVL 224
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 35.8 bits (81), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 61/147 (41%), Gaps = 21/147 (14%)
Query: 488 IREGGFNIVY--------NVAMKVA-----NLKQKEASRSFAAEFNALRNIRHRNLIKII 534
I EG F V+ N AM VA N F E +R H +++K+I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 535 TICSS----IDFEGFDFKAI-SNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVH 589
+ + I E + S Q+R +L L + A ++ A+ YL VH
Sbjct: 78 GVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFVH 134
Query: 590 GDLKPSNILLDQDVVTHVGDLGLAKFL 616
D+ N+L+ + +GD GL++++
Sbjct: 135 RDIAARNVLVSSNDCVKLGDFGLSRYM 161
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 35.8 bits (81), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 65/160 (40%), Gaps = 15/160 (9%)
Query: 499 VAMKVANLKQKEASR-SFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLRL 557
VA+K + E R F E + + H N+I + + + + + NG L
Sbjct: 53 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDT 112
Query: 558 C------NLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLG 611
++ Q V + ++ ++YL VH DL NIL++ ++V V D G
Sbjct: 113 FLKKNDGQFTVIQLVGMLRGISAGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFG 169
Query: 612 LAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNL 651
L++ L E A ++ G + + AP IA R
Sbjct: 170 LSRVL-----EDDPEAAYTTRGGKIPIRWTAPEAIAFRKF 204
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 35.8 bits (81), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 7/63 (11%)
Query: 584 QPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAP 643
Q IVH DLKP+N L+ D + + D G+A + +P TT+ S + GTV Y+ P
Sbjct: 173 QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQM---QPDTTSVVKDSQV---GTVNYMPP 225
Query: 644 VII 646
I
Sbjct: 226 EAI 228
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 35.8 bits (81), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 7/63 (11%)
Query: 584 QPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAP 643
Q IVH DLKP+N L+ D + + D G+A + +P TT+ S + GTV Y+ P
Sbjct: 173 QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQM---QPDTTSVVKDSQV---GTVNYMPP 225
Query: 644 VII 646
I
Sbjct: 226 EAI 228
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 35.8 bits (81), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 61/147 (41%), Gaps = 14/147 (9%)
Query: 505 NLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQL--RLCNLSL 562
+KQK S E L+ + H N++K+ + + + G+L + +
Sbjct: 86 QVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR 145
Query: 563 TQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLD---QDVVTHVGDLGLAKFLYGY 619
V+ A + + + + + IVH DLKP N+LL+ +D + D GL+
Sbjct: 146 FSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS------ 199
Query: 620 EPGTTAETASSSIGINGTVGYVAPVII 646
T E + GT Y+AP ++
Sbjct: 200 ---THFEASKKMKDKIGTAYYIAPEVL 223
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 35.8 bits (81), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 86/208 (41%), Gaps = 38/208 (18%)
Query: 463 MKQQFPMISHAELSKAT-------NNFSPANKIREGGFNIVYNV--AMKVANLKQKEASR 513
M Q+ P EL+K N SP G ++ ++VA K+ SR
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVA---VKKLSR 57
Query: 514 SFAA---------EFNALRNIRHRNLIKIITICS-SIDFEGF-DFKAISNGQ-LRLCNLS 561
F + E L++++H N+I ++ + + + E F D +++ L N+
Sbjct: 58 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 117
Query: 562 LTQRV---NIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618
Q++ ++ + + L++ I+H DLKPSN+ +++D + D GLA+
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLAR---- 173
Query: 619 YEPGTTAETASSSIGINGTVGYVAPVII 646
T G T Y AP I+
Sbjct: 174 -------HTDDEMTGYVATRWYRAPEIM 194
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 35.8 bits (81), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 15/110 (13%)
Query: 518 EFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVA---- 573
E L++ +H N+I I I G +FK++ L L L Q ++ + +
Sbjct: 104 ELKILKHFKHDNIIAIKDILRPTVPYG-EFKSVYV-VLDLMESDLHQIIHSSQPLTLEHV 161
Query: 574 --FAIEYLR-----HHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFL 616
F + LR H Q ++H DLKPSN+L++++ +GD G+A+ L
Sbjct: 162 RYFLYQLLRGLKYMHSAQ--VIHRDLKPSNLLVNENCELKIGDFGMARGL 209
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 35.8 bits (81), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 34/63 (53%), Gaps = 7/63 (11%)
Query: 584 QPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAP 643
Q IVH DLKP+N L+ D + + D G+A + +P TT+ S + GTV Y+ P
Sbjct: 125 QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQM---QPDTTSVVKDSQV---GTVNYMPP 177
Query: 644 VII 646
I
Sbjct: 178 EAI 180
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 35.8 bits (81), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 33/174 (18%), Positives = 69/174 (39%), Gaps = 33/174 (18%)
Query: 474 ELSKATNNFSPANKIREGGFNIVYN--------------VAMKVANLKQKEASR-SFAAE 518
E A + + ++ +G F +VY VA+K N R F E
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 65
Query: 519 FNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLR---------------LCNLSLT 563
+ ++ ++++++ + S + ++ G L+ L SL+
Sbjct: 66 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 125
Query: 564 QRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617
+ + +A ++A + YL + VH DL N ++ +D +GD G+ + +Y
Sbjct: 126 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 176
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 35.8 bits (81), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 37/93 (39%), Gaps = 9/93 (9%)
Query: 556 RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615
R+ S A + EYL H +++ DLKP N+L+DQ V D G AK
Sbjct: 134 RIGRFSEPHARFYAAQIVLTFEYL-HSL--DLIYRDLKPENLLIDQQGYIQVTDFGFAKR 190
Query: 616 LYGY------EPGTTAETASSSIGINGTVGYVA 642
+ G P A S G N V + A
Sbjct: 191 VKGRTWXLCGTPEALAPEIILSKGYNKAVDWWA 223
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 35.8 bits (81), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 59/137 (43%), Gaps = 23/137 (16%)
Query: 499 VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLRLC 558
VA+K L ++ + E +R + H N++K+ I + D G L
Sbjct: 39 VAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTD----DVGSLTEL 94
Query: 559 NLSLTQRVNIAIDVAFAIE---YLRHHCQ---------------PSIVHGDLKPSNILLD 600
N + + D+A +E L H + +++H DLKP+N+ ++
Sbjct: 95 NSVYIVQEYMETDLANVLEQGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFIN 154
Query: 601 -QDVVTHVGDLGLAKFL 616
+D+V +GD GLA+ +
Sbjct: 155 TEDLVLKIGDFGLARIM 171
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 35.8 bits (81), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 75/172 (43%), Gaps = 33/172 (19%)
Query: 498 NVAMKVANLKQKEAS--RSFAAEFNALRNIRHRNLIKIITICSS-------IDF----EG 544
VA+++ + Q +S + E ++ + H N++K+ + + +++ E
Sbjct: 41 EVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEV 100
Query: 545 FDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVV 604
FD+ +++G+++ R + A++Y Q IVH DLK N+LLD D+
Sbjct: 101 FDY-LVAHGRMKEKEARAKFR-----QIVSAVQYCH---QKFIVHRDLKAENLLLDADMN 151
Query: 605 THVGDLGLA-KFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENRE 655
+ D G + +F +G + T G+ Y AP + + + E
Sbjct: 152 IKIADFGFSNEFTFGNKLDTFC----------GSPPYAAPELFQGKKYDGPE 193
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 35.8 bits (81), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 20/101 (19%)
Query: 559 NLSLTQR--VNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL---DQDVVTHVGDLGLA 613
+ + T+R I D+ AI++L H +I H D+KP N+L ++D V + D G A
Sbjct: 103 DQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGFA 159
Query: 614 KFLYGYEPGTTAETASSSIGING-TVGYVAPVIIAARNLEN 653
K ET +++ T YVAP ++ +
Sbjct: 160 K-----------ETTQNALQTPCYTPYYVAPEVLGPEKYDK 189
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 35.8 bits (81), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 40/198 (20%), Positives = 81/198 (40%), Gaps = 38/198 (19%)
Query: 475 LSKATNNFSPANKIREGGFNIVYN----------VAMKVANLKQKEASRSFAA--EFNAL 522
L +A + +I EG + V+ VA+K ++ E + E L
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 523 RNIR---HRNLIKIITICS----------SIDFEGFDFKAISN-GQLRLCNLSLTQRVNI 568
R++ H N++++ +C+ ++ FE D + ++ + ++
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDM 125
Query: 569 AIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETA 628
+ +++L H +VH DLKP NIL+ + D GLA+ +Y ++ T+
Sbjct: 126 MFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLAR-IYSFQMALTS--- 178
Query: 629 SSSIGINGTVGYVAPVII 646
+ T+ Y AP ++
Sbjct: 179 -----VVVTLWYRAPEVL 191
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 35.8 bits (81), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 63/150 (42%), Gaps = 32/150 (21%)
Query: 494 NIVYNVAMKVANLKQKEASRS-FAAEFNALRNI-RHRNLIKIITICSS-------IDFEG 544
N V VA+K+ E S +E ++ I +H+N+I ++ C+ +++
Sbjct: 58 NRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 117
Query: 545 -----------------FDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSI 587
F F N + +L + L V+ A VA +EYL
Sbjct: 118 KGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDL---VSCAYQVARGMEYL---ASKKC 171
Query: 588 VHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617
+H DL N+L+ +D V + D GLA+ ++
Sbjct: 172 IHRDLAARNVLVTEDNVMKIADFGLARDIH 201
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/174 (18%), Positives = 69/174 (39%), Gaps = 33/174 (18%)
Query: 474 ELSKATNNFSPANKIREGGFNIVYN--------------VAMKVANLKQKEASR-SFAAE 518
E A + + ++ +G F +VY VA+K N R F E
Sbjct: 12 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 71
Query: 519 FNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLR---------------LCNLSLT 563
+ ++ ++++++ + S + ++ G L+ L SL+
Sbjct: 72 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 131
Query: 564 QRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617
+ + +A ++A + YL + VH DL N ++ +D +GD G+ + +Y
Sbjct: 132 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 182
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 20/101 (19%)
Query: 559 NLSLTQR--VNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL---DQDVVTHVGDLGLA 613
+ + T+R I D+ AI++L H +I H D+KP N+L ++D V + D G A
Sbjct: 122 DQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGFA 178
Query: 614 KFLYGYEPGTTAETASSSIGING-TVGYVAPVIIAARNLEN 653
K ET +++ T YVAP ++ +
Sbjct: 179 K-----------ETTQNALQTPCYTPYYVAPEVLGPEKYDK 208
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 59/147 (40%), Gaps = 26/147 (17%)
Query: 494 NIVYNVAMKVANLKQKEASRS-FAAEFNALRNI-RHRNLIKIITICSSIDFEGFDFKAIS 551
N V VA+K+ E S +E ++ I +H+N+I ++ C+ + S
Sbjct: 47 NRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 106
Query: 552 NGQLRLC---------------------NLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHG 590
G LR LS V+ A VA +EYL +H
Sbjct: 107 KGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHR 163
Query: 591 DLKPSNILLDQDVVTHVGDLGLAKFLY 617
DL N+L+ +D V + D GLA+ ++
Sbjct: 164 DLAARNVLVTEDNVMKIADFGLARDIH 190
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 14/68 (20%)
Query: 584 QPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGIN-----GTV 638
+P+I H DLK NIL+ ++ + DLGLA ++A+ +I I GT
Sbjct: 126 KPAIAHRDLKSKNILVKKNGTCCIADLGLA---------VRHDSATDTIDIAPNHRVGTK 176
Query: 639 GYVAPVII 646
Y+AP ++
Sbjct: 177 RYMAPEVL 184
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 59/147 (40%), Gaps = 26/147 (17%)
Query: 494 NIVYNVAMKVANLKQKEASRS-FAAEFNALRNI-RHRNLIKIITICSSIDFEGFDFKAIS 551
N V VA+K+ E S +E ++ I +H+N+I ++ C+ + S
Sbjct: 58 NRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 117
Query: 552 NGQLRLC---------------------NLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHG 590
G LR LS V+ A VA +EYL +H
Sbjct: 118 KGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHR 174
Query: 591 DLKPSNILLDQDVVTHVGDLGLAKFLY 617
DL N+L+ +D V + D GLA+ ++
Sbjct: 175 DLAARNVLVTEDNVMKIADFGLARDIH 201
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 69/163 (42%), Gaps = 32/163 (19%)
Query: 504 ANLKQKEA----SRSFAA---------EFNALRNIRHRN---LIKIITICSSI-DFEGFD 546
A L+QK A SR F + E L++++H N L+ + T +SI DF
Sbjct: 50 ARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVY 109
Query: 547 FKAISNGQLRLCNLSLTQRV---NIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDV 603
G L N+ +Q + ++ V + L++ I+H DLKPSN+ +++D
Sbjct: 110 LVTTLMGA-DLNNIVKSQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDS 168
Query: 604 VTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVII 646
+ D GLA+ + G T Y AP I+
Sbjct: 169 ELRILDFGLAR-----------QADEEMTGYVATRWYRAPEIM 200
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 63/146 (43%), Gaps = 19/146 (13%)
Query: 502 KVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD---FKAISNGQLRLC 558
++ ++Q EA F E +R + H N++ +I I + EG + +G L L
Sbjct: 59 RITEMQQVEA---FLREGLLMRGLNHPNVLALIGIM--LPPEGLPHVLLPYMCHGDL-LQ 112
Query: 559 NLSLTQR-------VNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLG 611
+ QR ++ + VA +EYL + VH DL N +LD+ V D G
Sbjct: 113 FIRSPQRNPTVKDLISFGLQVARGMEYL---AEQKFVHRDLAARNCMLDESFTVKVADFG 169
Query: 612 LAKFLYGYEPGTTAETASSSIGINGT 637
LA+ + E + + + + + T
Sbjct: 170 LARDILDREYYSVQQHRHARLPVKWT 195
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 59/147 (40%), Gaps = 26/147 (17%)
Query: 494 NIVYNVAMKVANLKQKEASRS-FAAEFNALRNI-RHRNLIKIITICSSIDFEGFDFKAIS 551
N V VA+K+ E S +E ++ I +H+N+I ++ C+ + S
Sbjct: 58 NRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 117
Query: 552 NGQLRLC---------------------NLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHG 590
G LR LS V+ A VA +EYL +H
Sbjct: 118 KGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHR 174
Query: 591 DLKPSNILLDQDVVTHVGDLGLAKFLY 617
DL N+L+ +D V + D GLA+ ++
Sbjct: 175 DLAARNVLVTEDNVMKIADFGLARDIH 201
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
Query: 575 AIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
A+ Y+ H Q I+H +LKP NI +D+ +GD GLAK
Sbjct: 128 ALSYI--HSQ-GIIHRNLKPXNIFIDESRNVKIGDFGLAK 164
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 54/110 (49%), Gaps = 15/110 (13%)
Query: 518 EFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVA---- 573
E L++ +H N+I I I G +FK++ L L L Q ++ + +
Sbjct: 103 ELKILKHFKHDNIIAIKDILRPTVPYG-EFKSVYV-VLDLMESDLHQIIHSSQPLTLEHV 160
Query: 574 --FAIEYLR-----HHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFL 616
F + LR H Q ++H DLKPSN+L++++ +GD G+A+ L
Sbjct: 161 RYFLYQLLRGLKYMHSAQ--VIHRDLKPSNLLVNENCELKIGDFGMARGL 208
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 59/147 (40%), Gaps = 26/147 (17%)
Query: 494 NIVYNVAMKVANLKQKEASRS-FAAEFNALRNI-RHRNLIKIITICSSIDFEGFDFKAIS 551
N V VA+K+ E S +E ++ I +H+N+I ++ C+ + S
Sbjct: 50 NRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 109
Query: 552 NGQLRLC---------------------NLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHG 590
G LR LS V+ A VA +EYL +H
Sbjct: 110 KGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHR 166
Query: 591 DLKPSNILLDQDVVTHVGDLGLAKFLY 617
DL N+L+ +D V + D GLA+ ++
Sbjct: 167 DLAARNVLVTEDNVMKIADFGLARDIH 193
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 59/147 (40%), Gaps = 26/147 (17%)
Query: 494 NIVYNVAMKVANLKQKEASRS-FAAEFNALRNI-RHRNLIKIITICSSIDFEGFDFKAIS 551
N V VA+K+ E S +E ++ I +H+N+I ++ C+ + S
Sbjct: 51 NRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 110
Query: 552 NGQLRLC---------------------NLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHG 590
G LR LS V+ A VA +EYL +H
Sbjct: 111 KGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHR 167
Query: 591 DLKPSNILLDQDVVTHVGDLGLAKFLY 617
DL N+L+ +D V + D GLA+ ++
Sbjct: 168 DLAARNVLVTEDNVMKIADFGLARDIH 194
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/174 (18%), Positives = 69/174 (39%), Gaps = 33/174 (18%)
Query: 474 ELSKATNNFSPANKIREGGFNIVYN--------------VAMKVANLKQKEASR-SFAAE 518
E A + + ++ +G F +VY VA+K N R F E
Sbjct: 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 78
Query: 519 FNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLR---------------LCNLSLT 563
+ ++ ++++++ + S + ++ G L+ L SL+
Sbjct: 79 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 138
Query: 564 QRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617
+ + +A ++A + YL + VH DL N ++ +D +GD G+ + +Y
Sbjct: 139 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 189
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 11/82 (13%)
Query: 569 AIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETA 628
+ +++ A+ YL I++ DLK N+LLD + + D G+ K G PG T
Sbjct: 127 SAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSX- 180
Query: 629 SSSIGINGTVGYVAPVIIAARN 650
GT Y+AP I+ +
Sbjct: 181 -----FCGTPNYIAPEILRGED 197
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/174 (18%), Positives = 69/174 (39%), Gaps = 33/174 (18%)
Query: 474 ELSKATNNFSPANKIREGGFNIVYN--------------VAMKVANLKQKEASR-SFAAE 518
E A + + ++ +G F +VY VA+K N R F E
Sbjct: 10 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 69
Query: 519 FNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLR---------------LCNLSLT 563
+ ++ ++++++ + S + ++ G L+ L SL+
Sbjct: 70 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 129
Query: 564 QRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617
+ + +A ++A + YL + VH DL N ++ +D +GD G+ + +Y
Sbjct: 130 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 180
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/174 (18%), Positives = 69/174 (39%), Gaps = 33/174 (18%)
Query: 474 ELSKATNNFSPANKIREGGFNIVYN--------------VAMKVANLKQKEASR-SFAAE 518
E A + + ++ +G F +VY VA+K N R F E
Sbjct: 13 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 72
Query: 519 FNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLR---------------LCNLSLT 563
+ ++ ++++++ + S + ++ G L+ L SL+
Sbjct: 73 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 132
Query: 564 QRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617
+ + +A ++A + YL + VH DL N ++ +D +GD G+ + +Y
Sbjct: 133 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 183
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 14/68 (20%)
Query: 584 QPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGIN-----GTV 638
+P+I H DLK NIL+ ++ + DLGLA ++A+ +I I GT
Sbjct: 127 KPAIAHRDLKSKNILVKKNGTCCIADLGLA---------VRHDSATDTIDIAPNHRVGTK 177
Query: 639 GYVAPVII 646
Y+AP ++
Sbjct: 178 RYMAPEVL 185
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 86/208 (41%), Gaps = 38/208 (18%)
Query: 463 MKQQFPMISHAELSKAT-------NNFSPANKIREGGFNIVYNV--AMKVANLKQKEASR 513
M Q+ P EL+K N SP G ++ ++VA K+ SR
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVA---VKKLSR 57
Query: 514 SFAA---------EFNALRNIRHRNLIKIITICS-SIDFEGF-DFKAISNGQ-LRLCNLS 561
F + E L++++H N+I ++ + + + E F D +++ L N+
Sbjct: 58 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 117
Query: 562 LTQRV---NIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618
Q++ ++ + + L++ I+H DLKPSN+ +++D + D GLA+
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLAR---- 173
Query: 619 YEPGTTAETASSSIGINGTVGYVAPVII 646
T G T Y AP I+
Sbjct: 174 -------HTDDEMTGYVATRWYRAPEIM 194
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/174 (18%), Positives = 69/174 (39%), Gaps = 33/174 (18%)
Query: 474 ELSKATNNFSPANKIREGGFNIVYN--------------VAMKVANLKQKEASR-SFAAE 518
E A + + ++ +G F +VY VA+K N R F E
Sbjct: 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 78
Query: 519 FNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLR---------------LCNLSLT 563
+ ++ ++++++ + S + ++ G L+ L SL+
Sbjct: 79 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLS 138
Query: 564 QRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617
+ + +A ++A + YL + VH DL N ++ +D +GD G+ + +Y
Sbjct: 139 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 189
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 14/68 (20%)
Query: 584 QPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGIN-----GTV 638
+P+I H DLK NIL+ ++ + DLGLA ++A+ +I I GT
Sbjct: 132 KPAIAHRDLKSKNILVKKNGTCCIADLGLA---------VRHDSATDTIDIAPNHRVGTK 182
Query: 639 GYVAPVII 646
Y+AP ++
Sbjct: 183 RYMAPEVL 190
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/174 (18%), Positives = 69/174 (39%), Gaps = 33/174 (18%)
Query: 474 ELSKATNNFSPANKIREGGFNIVYN--------------VAMKVANLKQKEASR-SFAAE 518
E A + + ++ +G F +VY VA+K N R F E
Sbjct: 12 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 71
Query: 519 FNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLR---------------LCNLSLT 563
+ ++ ++++++ + S + ++ G L+ L SL+
Sbjct: 72 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 131
Query: 564 QRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617
+ + +A ++A + YL + VH DL N ++ +D +GD G+ + +Y
Sbjct: 132 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 182
>pdb|2W1Z|A Chain A, Rop2 From Toxoplasma Gondii: A Virulence Factor With A
Protein-Kinase Fold And No Enzymatic Activity.
pdb|2W1Z|B Chain B, Rop2 From Toxoplasma Gondii: A Virulence Factor With A
Protein-Kinase Fold And No Enzymatic Activity
Length = 368
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 36/78 (46%), Gaps = 12/78 (15%)
Query: 587 IVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVII 646
+VH D + NILLDQ G + L F + G +A S IG G+ P
Sbjct: 212 LVHADFQVRNILLDQR-----GGVFLTGFEHLVRDGA---SAVSPIG----RGFAPPETT 259
Query: 647 AARNLENREKRHTVMSFP 664
A R L R+ T+M+FP
Sbjct: 260 AERMLPYRQHHPTLMTFP 277
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 14/68 (20%)
Query: 584 QPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGIN-----GTV 638
+P+I H DLK NIL+ ++ + DLGLA ++A+ +I I GT
Sbjct: 129 KPAIAHRDLKSKNILVKKNGTCCIADLGLA---------VRHDSATDTIDIAPNHRVGTK 179
Query: 639 GYVAPVII 646
Y+AP ++
Sbjct: 180 RYMAPEVL 187
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/174 (18%), Positives = 69/174 (39%), Gaps = 33/174 (18%)
Query: 474 ELSKATNNFSPANKIREGGFNIVYN--------------VAMKVANLKQKEASR-SFAAE 518
E A + + ++ +G F +VY VA+K N R F E
Sbjct: 9 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 68
Query: 519 FNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLR---------------LCNLSLT 563
+ ++ ++++++ + S + ++ G L+ L SL+
Sbjct: 69 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLS 128
Query: 564 QRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617
+ + +A ++A + YL + VH DL N ++ +D +GD G+ + +Y
Sbjct: 129 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 179
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/174 (18%), Positives = 69/174 (39%), Gaps = 33/174 (18%)
Query: 474 ELSKATNNFSPANKIREGGFNIVYN--------------VAMKVANLKQKEASR-SFAAE 518
E A + + ++ +G F +VY VA+K N R F E
Sbjct: 41 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 100
Query: 519 FNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLR---------------LCNLSLT 563
+ ++ ++++++ + S + ++ G L+ L SL+
Sbjct: 101 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 160
Query: 564 QRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617
+ + +A ++A + YL + VH DL N ++ +D +GD G+ + +Y
Sbjct: 161 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 211
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 64/135 (47%), Gaps = 23/135 (17%)
Query: 498 NVAMKVANLKQKEAS--RSFAAEFNALRNIRHRNLIKIITICSS-------IDF----EG 544
VA+++ + Q +S + E ++ + H N++K+ + + +++ E
Sbjct: 41 EVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEV 100
Query: 545 FDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVV 604
FD+ +++G+++ R + A++Y Q IVH DLK N+LLD D+
Sbjct: 101 FDY-LVAHGRMKEKEARAKFR-----QIVSAVQYCH---QKFIVHRDLKAENLLLDADMN 151
Query: 605 THVGDLGLA-KFLYG 618
+ D G + +F +G
Sbjct: 152 IKIADFGFSNEFTFG 166
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 86/208 (41%), Gaps = 38/208 (18%)
Query: 463 MKQQFPMISHAELSKAT-------NNFSPANKIREGGFNIVYNV--AMKVANLKQKEASR 513
M Q+ P EL+K N SP G ++ ++VA K+ SR
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVA---VKKLSR 57
Query: 514 SFAA---------EFNALRNIRHRNLIKIITICS-SIDFEGF-DFKAISNGQ-LRLCNLS 561
F + E L++++H N+I ++ + + + E F D +++ L N+
Sbjct: 58 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 117
Query: 562 LTQRV---NIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618
Q++ ++ + + L++ I+H DLKPSN+ +++D + D GLA+
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLAR---- 173
Query: 619 YEPGTTAETASSSIGINGTVGYVAPVII 646
T G T Y AP I+
Sbjct: 174 -------HTDDEMTGYVATRWYRAPEIM 194
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 44/202 (21%), Positives = 78/202 (38%), Gaps = 26/202 (12%)
Query: 471 SHAELSKATNNFSPAN------KIREGGFNIVYNV---------AMKVANLKQKEASRSF 515
S + T + +P + ++ +G F VY A KV + K +E +
Sbjct: 22 SMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDY 81
Query: 516 AAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLRLCNLSLTQRV---NIAIDV 572
E + L + H N++K++ + + + G + L L + + I +
Sbjct: 82 MVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVC 141
Query: 573 AFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSI 632
++ L + I+H DLK NIL D GD+ LA F G T
Sbjct: 142 KQTLDALNYLHDNKIIHRDLKAGNILFTLD-----GDIKLADF--GVSAKNTRXIQRRDX 194
Query: 633 GINGTVGYVAPVIIAARNLENR 654
I GT ++AP ++ ++R
Sbjct: 195 FI-GTPYWMAPEVVMCETSKDR 215
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 60/147 (40%), Gaps = 14/147 (9%)
Query: 505 NLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQL--RLCNLSL 562
+KQK S E L+ + H N+ K+ + + + G+L + +
Sbjct: 63 QVKQKTDKESLLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR 122
Query: 563 TQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLD---QDVVTHVGDLGLAKFLYGY 619
V+ A + + + + + IVH DLKP N+LL+ +D + D GL+
Sbjct: 123 FSEVDAARIIRQVLSGITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLS------ 176
Query: 620 EPGTTAETASSSIGINGTVGYVAPVII 646
T E + GT Y+AP ++
Sbjct: 177 ---THFEASKKXKDKIGTAYYIAPEVL 200
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 24/35 (68%)
Query: 582 HCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFL 616
H + +I H D+KPSNIL+D++ + D G ++++
Sbjct: 168 HNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYM 202
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 55/142 (38%), Gaps = 32/142 (22%)
Query: 518 EFNALRNIRHRNLIKIITICSSIDF---------EGFDFKAISNGQLRL----CNLSLTQ 564
E L + H N+IK++ I + F G D A + RL + Q
Sbjct: 79 EIAILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQ 138
Query: 565 RVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTT 624
V+ A+ YLR I+H D+K NI++ +D + D G A +L
Sbjct: 139 LVS-------AVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFGSAAYL-------- 180
Query: 625 AETASSSIGINGTVGYVAPVII 646
E GT+ Y AP ++
Sbjct: 181 -ERGKLFYTFCGTIEYCAPEVL 201
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/198 (20%), Positives = 81/198 (40%), Gaps = 38/198 (19%)
Query: 475 LSKATNNFSPANKIREGGFNIVYN----------VAMKVANLKQKEASRSFAA--EFNAL 522
L +A + +I EG + V+ VA+K ++ E + E L
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 523 RNIR---HRNLIKIITICS----------SIDFEGFDFKAISN-GQLRLCNLSLTQRVNI 568
R++ H N++++ +C+ ++ FE D + ++ + ++
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDM 125
Query: 569 AIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETA 628
+ +++L H +VH DLKP NIL+ + D GLA+ +Y ++ T+
Sbjct: 126 MFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLAR-IYSFQMALTS--- 178
Query: 629 SSSIGINGTVGYVAPVII 646
+ T+ Y AP ++
Sbjct: 179 -----VVVTLWYRAPEVL 191
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 14/68 (20%)
Query: 584 QPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGIN-----GTV 638
+P+I H DLK NIL+ ++ + DLGLA ++A+ +I I GT
Sbjct: 152 KPAIAHRDLKSKNILVKKNGTCCIADLGLA---------VRHDSATDTIDIAPNHRVGTK 202
Query: 639 GYVAPVII 646
Y+AP ++
Sbjct: 203 RYMAPEVL 210
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 47/216 (21%), Positives = 85/216 (39%), Gaps = 54/216 (25%)
Query: 471 SHAELSKATNNFSPAN------KIREGGFNIVYNV---------AMKVANLKQKEASRSF 515
S + T + +P + ++ +G F VY A KV + K +E +
Sbjct: 22 SMKQYEHVTRDLNPEDFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDY 81
Query: 516 AAEFNALRNIRHRNLIKI-------------ITICS--SIDFEGFDF-KAISNGQLRL-C 558
E + L + H N++K+ I C+ ++D + + ++ Q+++ C
Sbjct: 82 MVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVC 141
Query: 559 NLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618
+L A+ YL + I+H DLK NIL D GD+ LA F
Sbjct: 142 KQTLD-----------ALNYLHDN---KIIHRDLKAGNILFTLD-----GDIKLADFGVS 182
Query: 619 YEPGTTAETASSSIGINGTVGYVAPVIIAARNLENR 654
+ + S I GT ++AP ++ ++R
Sbjct: 183 AKNTRXIQRRDSFI---GTPYWMAPEVVMCETSKDR 215
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 67/162 (41%), Gaps = 30/162 (18%)
Query: 504 ANLKQKEA----SRSFAA---------EFNALRNIRHRN---LIKIITICSSI-DF-EGF 545
A L+QK A SR F + E L++++H N L+ + T +SI DF E +
Sbjct: 42 ARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVY 101
Query: 546 DFKAISNGQLR-LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVV 604
+ L + ++ V + L++ I+H DLKPSN+ +++D
Sbjct: 102 LVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCE 161
Query: 605 THVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVII 646
+ D GLA+ + G T Y AP I+
Sbjct: 162 LRILDFGLAR-----------QADEEMTGYVATRWYRAPEIM 192
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 40/198 (20%), Positives = 81/198 (40%), Gaps = 38/198 (19%)
Query: 475 LSKATNNFSPANKIREGGFNIVYN----------VAMKVANLKQKEASRSFAA--EFNAL 522
L +A + +I EG + V+ VA+K ++ E + E L
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 523 RNIR---HRNLIKIITICS----------SIDFEGFDFKAISN-GQLRLCNLSLTQRVNI 568
R++ H N++++ +C+ ++ FE D + ++ + ++
Sbjct: 66 RHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDM 125
Query: 569 AIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETA 628
+ +++L H +VH DLKP NIL+ + D GLA+ +Y ++ T+
Sbjct: 126 MFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLAR-IYSFQMALTS--- 178
Query: 629 SSSIGINGTVGYVAPVII 646
+ T+ Y AP ++
Sbjct: 179 -----VVVTLWYRAPEVL 191
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 60/147 (40%), Gaps = 21/147 (14%)
Query: 488 IREGGFNIVY--------NVAMKVA-----NLKQKEASRSFAAEFNALRNIRHRNLIKII 534
I EG F V+ N AM VA N F E +R H +++K+I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 535 TICSS----IDFEGFDFKAI-SNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVH 589
+ + I E + S Q+R +L L + A ++ A+ YL VH
Sbjct: 78 GVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK---RFVH 134
Query: 590 GDLKPSNILLDQDVVTHVGDLGLAKFL 616
D+ N+L+ +GD GL++++
Sbjct: 135 RDIAARNVLVSATDCVKLGDFGLSRYM 161
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 83/206 (40%), Gaps = 34/206 (16%)
Query: 463 MKQQFPMISHAELSKAT-------NNFSPANKIREGGFNIVYNVAMKVANLKQKEASRSF 515
M Q+ P EL+K N SP G ++ + K+ SR F
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTG-HRVAVKKLSRPF 59
Query: 516 AA---------EFNALRNIRHRNLIKIITICS-SIDFEGF-DFKAISNGQ-LRLCNLSLT 563
+ E L++++H N+I ++ + + + E F D +++ L N+
Sbjct: 60 QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC 119
Query: 564 QRV---NIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620
Q++ ++ + + L++ I+H DLKPSN+ +++D + D GLA+
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR------ 173
Query: 621 PGTTAETASSSIGINGTVGYVAPVII 646
T G T Y AP I+
Sbjct: 174 -----HTDDEMAGFVATRWYRAPEIM 194
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 14/68 (20%)
Query: 584 QPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGIN-----GTV 638
+P+I H DLK NIL+ ++ + DLGLA ++A+ +I I GT
Sbjct: 165 KPAIAHRDLKSKNILVKKNGTCCIADLGLA---------VRHDSATDTIDIAPNHRVGTK 215
Query: 639 GYVAPVII 646
Y+AP ++
Sbjct: 216 RYMAPEVL 223
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 73/172 (42%), Gaps = 37/172 (21%)
Query: 470 ISHAELSKATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAA--E 518
+S A + + + + K+ EG + VY VA+K L+ +E A E
Sbjct: 24 VSAAPSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIRE 83
Query: 519 FNALRNIRHRNLIKIITICSS-------IDFEGFDFKAISNG----QLRLCNLSLTQRVN 567
+ L+ ++HRN+I++ ++ ++ D K + +R+ L Q +N
Sbjct: 84 VSLLKELQHRNIIELKSVIHHNHRLHLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLIN 143
Query: 568 IAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL-----DQDVVTHVGDLGLAK 614
V F H + +H DLKP N+LL + V +GD GLA+
Sbjct: 144 ---GVNFC------HSR-RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR 185
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 83/206 (40%), Gaps = 34/206 (16%)
Query: 463 MKQQFPMISHAELSKAT-------NNFSPANKIREGGFNIVYNVAMKVANLKQKEASRSF 515
M Q+ P EL+K N SP G ++ + K+ SR F
Sbjct: 20 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTG-HRVAVKKLSRPF 78
Query: 516 AA---------EFNALRNIRHRNLIKIITICS-SIDFEGF-DFKAISNGQ-LRLCNLSLT 563
+ E L++++H N+I ++ + + + E F D +++ L N+
Sbjct: 79 QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC 138
Query: 564 QRV---NIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620
Q++ ++ + + L++ I+H DLKPSN+ +++D + D GLA+
Sbjct: 139 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR------ 192
Query: 621 PGTTAETASSSIGINGTVGYVAPVII 646
T G T Y AP I+
Sbjct: 193 -----HTDDEMTGYVATRWYRAPEIM 213
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 83/206 (40%), Gaps = 34/206 (16%)
Query: 463 MKQQFPMISHAELSKAT-------NNFSPANKIREGGFNIVYNVAMKVANLKQKEASRSF 515
M Q+ P EL+K N SP G ++ + K+ SR F
Sbjct: 21 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTG-HRVAVKKLSRPF 79
Query: 516 AA---------EFNALRNIRHRNLIKIITICS-SIDFEGF-DFKAISNGQ-LRLCNLSLT 563
+ E L++++H N+I ++ + + + E F D +++ L N+
Sbjct: 80 QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC 139
Query: 564 QRV---NIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620
Q++ ++ + + L++ I+H DLKPSN+ +++D + D GLA+
Sbjct: 140 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR------ 193
Query: 621 PGTTAETASSSIGINGTVGYVAPVII 646
T G T Y AP I+
Sbjct: 194 -----HTDDEMTGYVATRWYRAPEIM 214
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 62/147 (42%), Gaps = 26/147 (17%)
Query: 518 EFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIE 577
E L+ + H N++K+ + G+L + L Q+ + +D A ++
Sbjct: 71 EVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGEL-FDEIILRQKFS-EVDAAVIMK 128
Query: 578 -------YLRHHCQPSIVHGDLKPSNILLD---QDVVTHVGDLGL-AKFLYGYEPGTTAE 626
YL H +IVH DLKP N+LL+ +D + + D GL A F G G E
Sbjct: 129 QVLSGTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVG---GKMKE 182
Query: 627 TASSSIGINGTVGYVAPVIIAARNLEN 653
GT Y+AP ++ + E
Sbjct: 183 RL-------GTAYYIAPEVLRKKYDEK 202
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 11/61 (18%)
Query: 586 SIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVI 645
I+H DLKPSN+ +++D + D GLA+ T G T Y AP I
Sbjct: 145 DIIHRDLKPSNLAVNEDCELKILDFGLAR-----------HTDDEMAGFVATRWYRAPEI 193
Query: 646 I 646
+
Sbjct: 194 M 194
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 67/158 (42%), Gaps = 24/158 (15%)
Query: 500 AMKV---ANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSS-----IDFEGFDFKAIS 551
A+KV A+ K K+ S + E L+ + H N++K+ I I E + +
Sbjct: 51 AVKVINKASAKNKDTS-TILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELF 109
Query: 552 NGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL---DQDVVTHVG 608
+ ++ S I V I Y+ H +IVH DLKP NILL ++D +
Sbjct: 110 DEIIKRKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKII 166
Query: 609 DLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVII 646
D GL+ T + + GT Y+AP ++
Sbjct: 167 DFGLS---------TCFQQNTKMKDRIGTAYYIAPEVL 195
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 67/158 (42%), Gaps = 24/158 (15%)
Query: 500 AMKV---ANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSS-----IDFEGFDFKAIS 551
A+KV A+ K K+ S + E L+ + H N++K+ I I E + +
Sbjct: 51 AVKVINKASAKNKDTS-TILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELF 109
Query: 552 NGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL---DQDVVTHVG 608
+ ++ S I V I Y+ H +IVH DLKP NILL ++D +
Sbjct: 110 DEIIKRKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKII 166
Query: 609 DLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVII 646
D GL+ T + + GT Y+AP ++
Sbjct: 167 DFGLS---------TCFQQNTKMKDRIGTAYYIAPEVL 195
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 11/80 (13%)
Query: 571 DVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASS 630
+++ A+ YL I++ DLK N+LLD + + D G+ K G PG T
Sbjct: 114 EISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSX--- 165
Query: 631 SIGINGTVGYVAPVIIAARN 650
GT Y+AP I+ +
Sbjct: 166 ---FCGTPNYIAPEILRGED 182
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 53/120 (44%), Gaps = 25/120 (20%)
Query: 542 FEGFDFKAISNGQLRLCN----LSLTQRVNIAIDVAFAIEYLRH---HCQP----SIVHG 590
FE DF + L LC L L +R A+ A YLR CQ ++H
Sbjct: 108 FEDNDFVFVV---LELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYLHRNRVIHR 163
Query: 591 DLKPSNILLDQDVVTHVGDLGLA-KFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAAR 649
DLK N+ L++D+ +GD GLA K Y E + GT Y+AP +++ +
Sbjct: 164 DLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---------LCGTPNYIAPEVLSKK 214
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 86/209 (41%), Gaps = 38/209 (18%)
Query: 462 SMKQQFPMISHAELSKAT-------NNFSPANKIREGGFNIVYNV--AMKVANLKQKEAS 512
S Q+ P EL+K N SP G ++ ++VA K+ S
Sbjct: 2 SHSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVA---VKKLS 58
Query: 513 RSFAA---------EFNALRNIRHRNLIKIITICS-SIDFEGF-DFKAISNGQ-LRLCNL 560
R F + E L++++H N+I ++ + + + E F D +++ L N+
Sbjct: 59 RPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNI 118
Query: 561 SLTQRV---NIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617
Q++ ++ + + L++ I+H DLKPSN+ +++D + D GLA+
Sbjct: 119 VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--- 175
Query: 618 GYEPGTTAETASSSIGINGTVGYVAPVII 646
T G T Y AP I+
Sbjct: 176 --------HTDDEMTGYVATRWYRAPEIM 196
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 73/182 (40%), Gaps = 28/182 (15%)
Query: 488 IREGGFNIVY--------NVAMKVA-----NLKQKEASRSFAAEFNALRNIRHRNLIKII 534
I EG F V+ N AM VA N F E +R H +++K+I
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 535 TICSS----IDFEGFDFKAI-SNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVH 589
+ + I E + S Q+R +L L + A ++ A+ YL VH
Sbjct: 458 GVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK---RFVH 514
Query: 590 GDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAAR 649
D+ N+L+ + +GD GL++++ E T + + + I ++AP I R
Sbjct: 515 RDIAARNVLVSSNDCVKLGDFGLSRYM---EDSTYYKASKGKLPIK----WMAPESINFR 567
Query: 650 NL 651
Sbjct: 568 RF 569
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 64/140 (45%), Gaps = 30/140 (21%)
Query: 521 ALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLRLCN-----------LSLTQRV--- 566
A+RN R L +++ C+S GF S+G++ +C L +R+
Sbjct: 56 AIRNQIIREL-QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEE 114
Query: 567 ---NIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623
++I V + YLR Q I+H D+KPSNIL++ + D G++ G
Sbjct: 115 ILGKVSIAVLRGLAYLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVS--------GQ 164
Query: 624 TAETASSSIGINGTVGYVAP 643
++ ++S GT Y+AP
Sbjct: 165 LIDSMANS--FVGTRSYMAP 182
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 67/156 (42%), Gaps = 18/156 (11%)
Query: 487 KIREGGFNIVYNVAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSS------- 539
K R G +IV V +KV + ++ SR F E LR H N++ ++ C S
Sbjct: 28 KGRWQGNDIVVKV-LKVRDWSTRK-SRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPT 85
Query: 540 IDFEGFDFKAISNGQLRLCNLSL--TQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNI 597
+ + ++ N N + +Q V A+D+A + +L H +P I L ++
Sbjct: 86 LITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFL-HTLEPLIPRHALNSRSV 144
Query: 598 LLDQDVVTHVGDLGLAKFLYG-----YEPGTTAETA 628
++D+D+ + + KF + Y P A A
Sbjct: 145 MIDEDMTARIS-MADVKFSFQSPGRMYAPAWVAPEA 179
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
Query: 567 NIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFL 616
IA+ + A+E+L H + S++H D+KPSN+L++ + D G++ +L
Sbjct: 113 KIAVSIVKALEHL--HSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYL 160
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 53/120 (44%), Gaps = 25/120 (20%)
Query: 542 FEGFDFKAISNGQLRLCN----LSLTQRVNIAIDVAFAIEYLRH---HCQP----SIVHG 590
FE DF + L LC L L +R A+ A YLR CQ ++H
Sbjct: 110 FEDNDFVFVV---LELCRRRSLLELHKRRK-ALTEPEARYYLRQIVLGCQYLHRNRVIHR 165
Query: 591 DLKPSNILLDQDVVTHVGDLGLA-KFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAAR 649
DLK N+ L++D+ +GD GLA K Y E + GT Y+AP +++ +
Sbjct: 166 DLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---------LCGTPNYIAPEVLSKK 216
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 66/142 (46%), Gaps = 18/142 (12%)
Query: 511 ASRSFAAEFNALRNIRHRNLIKIITICS-SIDFEGF-DFKAISNGQ-LRLCNLSLTQRV- 566
A R++ E L++++H N+I ++ + + + E F D +++ L N+ Q++
Sbjct: 70 AKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 128
Query: 567 --NIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTT 624
++ + + L++ I+H DLKPSN+ +++D + D GLA+
Sbjct: 129 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR---------- 178
Query: 625 AETASSSIGINGTVGYVAPVII 646
T G T Y AP I+
Sbjct: 179 -HTDDEMTGYVATRWYRAPEIM 199
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 10/64 (15%)
Query: 587 IVHGDLKPSNILLDQDVVTHVGDLGLA-KFLYGYEPGTTAETASSSIGINGTVGYVAPVI 645
++H DLK N+ L++D+ +GD GLA K Y E + GT Y+AP +
Sbjct: 136 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---------LCGTPNYIAPEV 186
Query: 646 IAAR 649
++ +
Sbjct: 187 LSKK 190
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 66/142 (46%), Gaps = 18/142 (12%)
Query: 511 ASRSFAAEFNALRNIRHRNLIKIITICS-SIDFEGF-DFKAISNGQ-LRLCNLSLTQRV- 566
A R++ E L++++H N+I ++ + + + E F D +++ L N+ Q++
Sbjct: 70 AKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 128
Query: 567 --NIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTT 624
++ + + L++ I+H DLKPSN+ +++D + D GLA+
Sbjct: 129 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR---------- 178
Query: 625 AETASSSIGINGTVGYVAPVII 646
T G T Y AP I+
Sbjct: 179 -HTDDEMTGYVATRWYRAPEIM 199
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 54/117 (46%), Gaps = 7/117 (5%)
Query: 183 SKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGI-RNLVNLNWLTMES 241
+KL LY N N + LP I ++ + + N++ + +P G+ LVNL L ++
Sbjct: 61 TKLRLLYLNDNKLQ-TLPAGIFKELKNLETLWVTDNKLQA-LPIGVFDQLVNLAELRLDR 118
Query: 242 SQLIGTIPPLIGETPNLQLLNIGGNHLQG---SILSSLGNLTLQTYLFNNLQGNIPS 295
+QL P + L L++G N LQ + L +L + L+NN +P
Sbjct: 119 NQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLK-ELRLYNNQLKRVPE 174
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 13/85 (15%)
Query: 561 SLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620
+L + + +A ++A + YL VH DL N ++ D +GD G+ + +Y
Sbjct: 128 TLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIY--- 181
Query: 621 PGTTAETASSSIGING--TVGYVAP 643
ETA G G V ++AP
Sbjct: 182 -----ETAYYRKGGKGLLPVRWMAP 201
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 17/80 (21%)
Query: 578 YLRHHCQPSIVHGDLKPSNILLD---QDVVTHVGDLGL-AKFLYGYEPGTTAETASSSIG 633
YL H +IVH DLKP N+LL+ +D + + D GL A F G G E
Sbjct: 119 YLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVG---GKMKERL----- 167
Query: 634 INGTVGYVAPVIIAARNLEN 653
GT Y+AP ++ + E
Sbjct: 168 --GTAYYIAPEVLRKKYDEK 185
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 11/61 (18%)
Query: 586 SIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVI 645
I+H DLKPSN+ +++D + D GLA+ T G T Y AP I
Sbjct: 141 DIIHRDLKPSNLAVNEDCELKILDFGLAR-----------HTDDEMAGFVATRWYRAPEI 189
Query: 646 I 646
+
Sbjct: 190 M 190
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 83/206 (40%), Gaps = 34/206 (16%)
Query: 463 MKQQFPMISHAELSKAT-------NNFSPANKIREGGFNIVYNVAMKVANLKQKEASRSF 515
M Q+ P EL+K N SP G ++ + K+ SR F
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTG-HRVAVKKLSRPF 59
Query: 516 AA---------EFNALRNIRHRNLIKIITICS-SIDFEGF-DFKAISNGQ-LRLCNLSLT 563
+ E L++++H N+I ++ + + + E F D +++ L N+
Sbjct: 60 QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC 119
Query: 564 QRV---NIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620
Q++ ++ + + L++ I+H DLKPSN+ +++D + D GLA+
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR------ 173
Query: 621 PGTTAETASSSIGINGTVGYVAPVII 646
T G T Y AP I+
Sbjct: 174 -----HTDDEMTGYVATRWYRAPEIM 194
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 67/162 (41%), Gaps = 30/162 (18%)
Query: 504 ANLKQKEA----SRSFAA---------EFNALRNIRHRN---LIKIITICSSI-DF-EGF 545
A L+QK A SR F + E L++++H N L+ + T +SI DF E +
Sbjct: 50 ARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVY 109
Query: 546 DFKAISNGQLR-LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVV 604
+ L + ++ V + L++ I+H DLKPSN+ +++D
Sbjct: 110 LVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSE 169
Query: 605 THVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVII 646
+ D GLA+ + G T Y AP I+
Sbjct: 170 LRILDFGLAR-----------QADEEMTGYVATRWYRAPEIM 200
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 11/76 (14%)
Query: 571 DVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASS 630
++ A+EYL H + +V+ D+K N++LD+D + D GL K G G T +T
Sbjct: 116 EIVSALEYL--HSR-DVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKT--- 167
Query: 631 SIGINGTVGYVAPVII 646
GT Y+AP ++
Sbjct: 168 ---FCGTPEYLAPEVL 180
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 11/61 (18%)
Query: 586 SIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVI 645
I+H DLKPSN+ +++D + D GLA+ T G T Y AP I
Sbjct: 150 DIIHRDLKPSNLAVNEDCELKILDFGLAR-----------HTDDEMTGYVATRWYRAPEI 198
Query: 646 I 646
+
Sbjct: 199 M 199
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 11/61 (18%)
Query: 586 SIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVI 645
I+H DLKPSN+ +++D + D GLA+ T G T Y AP I
Sbjct: 144 DIIHRDLKPSNLAVNEDCELKILDFGLAR-----------HTDDEMTGYVATRWYRAPEI 192
Query: 646 I 646
+
Sbjct: 193 M 193
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 11/61 (18%)
Query: 586 SIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVI 645
I+H DLKPSN+ +++D + D GLA+ T G T Y AP I
Sbjct: 151 DIIHRDLKPSNLAVNEDCELKILDFGLAR-----------HTDDEMTGYVATRWYRAPEI 199
Query: 646 I 646
+
Sbjct: 200 M 200
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 66/142 (46%), Gaps = 18/142 (12%)
Query: 511 ASRSFAAEFNALRNIRHRNLIKIITICS-SIDFEGF-DFKAISNGQ-LRLCNLSLTQRV- 566
A R++ E L++++H N+I ++ + + + E F D +++ L N+ Q++
Sbjct: 88 AKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 146
Query: 567 --NIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTT 624
++ + + L++ I+H DLKPSN+ +++D + D GLA+
Sbjct: 147 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---------- 196
Query: 625 AETASSSIGINGTVGYVAPVII 646
T G T Y AP I+
Sbjct: 197 -HTDDEMXGYVATRWYRAPEIM 217
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 83/206 (40%), Gaps = 34/206 (16%)
Query: 463 MKQQFPMISHAELSKAT-------NNFSPANKIREGGFNIVYNVAMKVANLKQKEASRSF 515
M Q+ P EL+K N SP G ++ + K+ SR F
Sbjct: 21 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTG-HRVAVKKLSRPF 79
Query: 516 AA---------EFNALRNIRHRNLIKIITICS-SIDFEGF-DFKAISNGQ-LRLCNLSLT 563
+ E L++++H N+I ++ + + + E F D +++ L N+
Sbjct: 80 QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC 139
Query: 564 QRV---NIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620
Q++ ++ + + L++ I+H DLKPSN+ +++D + D GLA+
Sbjct: 140 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR------ 193
Query: 621 PGTTAETASSSIGINGTVGYVAPVII 646
T G T Y AP I+
Sbjct: 194 -----HTDDEMXGXVATRWYRAPEIM 214
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 66/142 (46%), Gaps = 18/142 (12%)
Query: 511 ASRSFAAEFNALRNIRHRNLIKIITICS-SIDFEGF-DFKAISNGQ-LRLCNLSLTQRV- 566
A R++ E L++++H N+I ++ + + + E F D +++ L N+ Q++
Sbjct: 65 AKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 123
Query: 567 --NIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTT 624
++ + + L++ I+H DLKPSN+ +++D + D GLA+
Sbjct: 124 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---------- 173
Query: 625 AETASSSIGINGTVGYVAPVII 646
T G T Y AP I+
Sbjct: 174 -HTDDEMTGYVATRWYRAPEIM 194
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 11/76 (14%)
Query: 571 DVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASS 630
++ A+EYL H + +V+ D+K N++LD+D + D GL K G G T +T
Sbjct: 113 EIVSALEYL--HSR-DVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKT--- 164
Query: 631 SIGINGTVGYVAPVII 646
GT Y+AP ++
Sbjct: 165 ---FCGTPEYLAPEVL 177
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 11/80 (13%)
Query: 571 DVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASS 630
+++ A+ YL I++ DLK N+LLD + + D G+ K G PG T
Sbjct: 118 EISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRPGDTTSX--- 169
Query: 631 SIGINGTVGYVAPVIIAARN 650
GT Y+AP I+ +
Sbjct: 170 ---FCGTPNYIAPEILRGED 186
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 11/61 (18%)
Query: 586 SIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVI 645
I+H DLKPSN+ +++D + D GLA+ T G T Y AP I
Sbjct: 151 DIIHRDLKPSNLAVNEDCELKILDFGLAR-----------HTDDEMTGYVATRWYRAPEI 199
Query: 646 I 646
+
Sbjct: 200 M 200
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 61/147 (41%), Gaps = 21/147 (14%)
Query: 488 IREGGFNIVY--------NVAMKVA-----NLKQKEASRSFAAEFNALRNIRHRNLIKII 534
I EG F V+ N A+ VA N F E +R H +++K+I
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 535 TICSS----IDFEGFDFKAI-SNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVH 589
+ + I E + S Q+R +L L + A ++ A+ YL VH
Sbjct: 106 GVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFVH 162
Query: 590 GDLKPSNILLDQDVVTHVGDLGLAKFL 616
D+ N+L+ + +GD GL++++
Sbjct: 163 RDIAARNVLVSSNDCVKLGDFGLSRYM 189
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 11/61 (18%)
Query: 586 SIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVI 645
I+H DLKPSN+ +++D + D GLA+ T G T Y AP I
Sbjct: 155 DIIHRDLKPSNLAVNEDCELKILDFGLAR-----------HTDDEMTGYVATRWYRAPEI 203
Query: 646 I 646
+
Sbjct: 204 M 204
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 11/61 (18%)
Query: 586 SIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVI 645
I+H DLKPSN+ +++D + D GLA+ T G T Y AP I
Sbjct: 152 DIIHRDLKPSNLAVNEDCELKILDFGLAR-----------HTDDEMTGYVATRWYRAPEI 200
Query: 646 I 646
+
Sbjct: 201 M 201
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 66/142 (46%), Gaps = 18/142 (12%)
Query: 511 ASRSFAAEFNALRNIRHRNLIKIITICS-SIDFEGF-DFKAISNGQ-LRLCNLSLTQRV- 566
A R++ E L++++H N+I ++ + + + E F D +++ L N+ Q++
Sbjct: 62 AKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 120
Query: 567 --NIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTT 624
++ + + L++ I+H DLKPSN+ +++D + D GLA+
Sbjct: 121 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---------- 170
Query: 625 AETASSSIGINGTVGYVAPVII 646
T G T Y AP I+
Sbjct: 171 -HTDDEMTGYVATRWYRAPEIM 191
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 32/63 (50%), Gaps = 6/63 (9%)
Query: 584 QPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAP 643
Q +IVH DLKP NILL + +GD+ + F + G E I GT Y+AP
Sbjct: 149 QNNIVHLDLKPQNILLSS--IYPLGDIKIVDFGMSRKIGHACELRE----IMGTPEYLAP 202
Query: 644 VII 646
I+
Sbjct: 203 EIL 205
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 44/109 (40%), Gaps = 21/109 (19%)
Query: 554 QLRLCNLS-----LTQRVNIAIDVAFAIEYLRHHCQ-------PSIVHGDLKPSNILLDQ 601
Q+ C+ + +R +D A+E + ++H DLKPSNI L
Sbjct: 112 QMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVD 171
Query: 602 DVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARN 650
+GD GL T+ + GT+ Y++P I++++
Sbjct: 172 TKQVKIGDFGLV---------TSLKNDGKRTRSKGTLRYMSPEQISSQD 211
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 67/158 (42%), Gaps = 24/158 (15%)
Query: 500 AMKV---ANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSS-----IDFEGFDFKAIS 551
A+KV A+ K K+ S + E L+ + H N++K+ I I E + +
Sbjct: 51 AVKVINKASAKNKDTS-TILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELF 109
Query: 552 NGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL---DQDVVTHVG 608
+ ++ S I V I Y+ H +IVH DLKP NILL ++D +
Sbjct: 110 DEIIKRKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKII 166
Query: 609 DLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVII 646
D GL+ T + + GT Y+AP ++
Sbjct: 167 DFGLS---------TCFQQNTKMKDRIGTAYYIAPEVL 195
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 11/61 (18%)
Query: 586 SIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVI 645
I+H DLKPSN+ +++D + D GLA+ T G T Y AP I
Sbjct: 141 DIIHRDLKPSNLAVNEDCELKILDFGLAR-----------HTDDEMTGYVATRWYRAPEI 189
Query: 646 I 646
+
Sbjct: 190 M 190
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 61/147 (41%), Gaps = 21/147 (14%)
Query: 488 IREGGFNIVY--------NVAMKVA-----NLKQKEASRSFAAEFNALRNIRHRNLIKII 534
I EG F V+ N A+ VA N F E +R H +++K+I
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 535 TICSS----IDFEGFDFKAI-SNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVH 589
+ + I E + S Q+R +L L + A ++ A+ YL VH
Sbjct: 83 GVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFVH 139
Query: 590 GDLKPSNILLDQDVVTHVGDLGLAKFL 616
D+ N+L+ + +GD GL++++
Sbjct: 140 RDIAARNVLVSSNDCVKLGDFGLSRYM 166
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 11/61 (18%)
Query: 586 SIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVI 645
I+H DLKPSN+ +++D + D GLA+ T G T Y AP I
Sbjct: 141 DIIHRDLKPSNLAVNEDCELKILDFGLAR-----------HTDDEMTGYVATRWYRAPEI 189
Query: 646 I 646
+
Sbjct: 190 M 190
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 66/142 (46%), Gaps = 18/142 (12%)
Query: 511 ASRSFAAEFNALRNIRHRNLIKIITICS-SIDFEGF-DFKAISNGQ-LRLCNLSLTQRV- 566
A R++ E L++++H N+I ++ + + + E F D +++ L N+ Q++
Sbjct: 63 AKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 121
Query: 567 --NIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTT 624
++ + + L++ I+H DLKPSN+ +++D + D GLA+
Sbjct: 122 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR---------- 171
Query: 625 AETASSSIGINGTVGYVAPVII 646
T G T Y AP I+
Sbjct: 172 -HTDDEMTGYVATRWYRAPEIM 192
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 40/76 (52%), Gaps = 11/76 (14%)
Query: 571 DVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASS 630
++ A+EYL H + +V+ D+K N++LD+D + D GL K G G T +T
Sbjct: 113 EIVSALEYL--HSR-DVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKT--- 164
Query: 631 SIGINGTVGYVAPVII 646
GT Y+AP ++
Sbjct: 165 ---FCGTPEYLAPEVL 177
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 86/208 (41%), Gaps = 38/208 (18%)
Query: 463 MKQQFPMISHAELSKAT-------NNFSPANKIREGGFNIVYNV--AMKVANLKQKEASR 513
M Q+ P EL+K N SP G ++ ++VA K+ SR
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVA---VKKLSR 57
Query: 514 SFAA---------EFNALRNIRHRNLIKIITICS-SIDFEGF-DFKAISNGQ-LRLCNLS 561
F + E L++++H N+I ++ + + + E F D +++ L N+
Sbjct: 58 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 117
Query: 562 LTQRV---NIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618
Q++ ++ + + L++ I+H DLKPSN+ +++D + D GLA+
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLAR---- 173
Query: 619 YEPGTTAETASSSIGINGTVGYVAPVII 646
T G T Y AP I+
Sbjct: 174 -------HTDDEMTGYVATRWYRAPEIM 194
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 11/61 (18%)
Query: 586 SIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVI 645
I+H DLKPSN+ +++D + D GLA+ T G T Y AP I
Sbjct: 142 DIIHRDLKPSNLAVNEDCELKILDFGLAR-----------HTDDEMTGYVATRWYRAPEI 190
Query: 646 I 646
+
Sbjct: 191 M 191
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 11/61 (18%)
Query: 586 SIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVI 645
I+H DLKPSN+ +++D + D GLA+ T G T Y AP I
Sbjct: 141 DIIHRDLKPSNLAVNEDCELKILDFGLAR-----------HTDDEMTGYVATRWYRAPEI 189
Query: 646 I 646
+
Sbjct: 190 M 190
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 34.3 bits (77), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 45/198 (22%), Positives = 85/198 (42%), Gaps = 25/198 (12%)
Query: 488 IREGGFNIVYN------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSS 539
I +G F VY+ VA+++ ++++ ++ ++F E A R RH N++ + C S
Sbjct: 41 IGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMS 100
Query: 540 IDF--------EGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGD 591
+G ++ + +++ T++ IA ++ + YL H + I+H D
Sbjct: 101 PPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQ--IAQEIVKGMGYL--HAK-GILHKD 155
Query: 592 LKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNL 651
LK N+ D V + D GL + G + NG + ++AP II +
Sbjct: 156 LKSKNVFYDNGKVV-ITDFGLFSISGVLQAGRREDKLRIQ---NGWLCHLAPEIIRQLSP 211
Query: 652 ENREKRHTVMSFPQRFAL 669
+ E + FAL
Sbjct: 212 DTEEDKLPFSKHSDVFAL 229
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 61/147 (41%), Gaps = 21/147 (14%)
Query: 488 IREGGFNIVY--------NVAMKVA-----NLKQKEASRSFAAEFNALRNIRHRNLIKII 534
I EG F V+ N A+ VA N F E +R H +++K+I
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 535 TICSS----IDFEGFDFKAI-SNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVH 589
+ + I E + S Q+R +L L + A ++ A+ YL VH
Sbjct: 78 GVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFVH 134
Query: 590 GDLKPSNILLDQDVVTHVGDLGLAKFL 616
D+ N+L+ + +GD GL++++
Sbjct: 135 RDIAARNVLVSSNDCVKLGDFGLSRYM 161
>pdb|3O6N|A Chain A, Crystal Structure Of Apl1 Leucine-Rich Repeat Domain
Length = 390
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 70/155 (45%), Gaps = 20/155 (12%)
Query: 178 LLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWL 237
LL + ++E L N E + ++ A + TI+++ MG N I PH +N+ L L
Sbjct: 64 LLDSFRQVELLNLNDLQIEEIDTYAFA-YAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 122
Query: 238 TMESSQLIGTIPPLIGETPNLQLLNIGGNHLQG------SILSSLGNLTLQT-------- 283
+E + L + TP L L++ N+L+ +SL NL L +
Sbjct: 123 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDL 182
Query: 284 ----YLFN-NLQGNIPSSLANCKSLLGLSVSHNKL 313
LF+ N+ N+ S+LA ++ L SHN +
Sbjct: 183 SLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSI 217
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 61/147 (41%), Gaps = 21/147 (14%)
Query: 488 IREGGFNIVY--------NVAMKVA-----NLKQKEASRSFAAEFNALRNIRHRNLIKII 534
I EG F V+ N A+ VA N F E +R H +++K+I
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 535 TICSS----IDFEGFDFKAI-SNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVH 589
+ + I E + S Q+R +L L + A ++ A+ YL VH
Sbjct: 81 GVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFVH 137
Query: 590 GDLKPSNILLDQDVVTHVGDLGLAKFL 616
D+ N+L+ + +GD GL++++
Sbjct: 138 RDIAARNVLVSSNDCVKLGDFGLSRYM 164
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 33/174 (18%), Positives = 68/174 (39%), Gaps = 33/174 (18%)
Query: 474 ELSKATNNFSPANKIREGGFNIVYN--------------VAMKVANLKQKEASR-SFAAE 518
E A + + ++ +G F +VY VA+K N R F E
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 65
Query: 519 FNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLR---------------LCNLSLT 563
+ ++ ++++++ + S + ++ G L+ L SL+
Sbjct: 66 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 125
Query: 564 QRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617
+ + +A ++A + YL + VH DL N + +D +GD G+ + +Y
Sbjct: 126 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIY 176
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 550 ISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGD 609
++ G+ + L + I +V +EYL + Q +H D+K NILL +D + D
Sbjct: 108 VAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDGSVQIAD 164
Query: 610 LGLAKFL 616
G++ FL
Sbjct: 165 FGVSAFL 171
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 40/92 (43%), Gaps = 11/92 (11%)
Query: 559 NLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618
L++ A ++ +++L IV+ DLK NILLD+D + D G+ K
Sbjct: 115 KFDLSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCK---- 167
Query: 619 YEPGTTAETASSSIGINGTVGYVAPVIIAARN 650
+ ++ GT Y+AP I+ +
Sbjct: 168 --ENMLGDAKTNEFC--GTPDYIAPEILLGQK 195
>pdb|3OJA|B Chain B, Crystal Structure Of Lrim1APL1C COMPLEX
Length = 597
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 70/155 (45%), Gaps = 20/155 (12%)
Query: 178 LLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWL 237
LL + ++E L N E + ++ A + TI+++ MG N I PH +N+ L L
Sbjct: 70 LLDSFRQVELLNLNDLQIEEIDTYAFA-YAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 128
Query: 238 TMESSQLIGTIPPLIGETPNLQLLNIGGNHLQG------SILSSLGNLTLQT-------- 283
+E + L + TP L L++ N+L+ +SL NL L +
Sbjct: 129 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDL 188
Query: 284 ----YLFN-NLQGNIPSSLANCKSLLGLSVSHNKL 313
LF+ N+ N+ S+LA ++ L SHN +
Sbjct: 189 SLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSI 223
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 70/152 (46%), Gaps = 23/152 (15%)
Query: 480 NNFSPANKIREGGFNIVYNVAMKVANLKQKEASRSFAAEFN-ALRNIRHRNLIKIITICS 538
++F +++ G +V+ V+ K + L A + E A+RN R L +++ C+
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVM--ARKLIHLEIKPAIRNQIIREL-QVLHECN 62
Query: 539 SIDFEGFDFKAISNGQLRLC-----NLSLTQRVN------------IAIDVAFAIEYLRH 581
S GF S+G++ +C SL Q + ++I V + YLR
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 582 HCQPSIVHGDLKPSNILLDQDVVTHVGDLGLA 613
+ I+H D+KPSNIL++ + D G++
Sbjct: 123 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 11/100 (11%)
Query: 550 ISNGQLRLCNLSLTQRV---NIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTH 606
I+ G+L +LS +R + I V + L H + I++ D+K NILLD +
Sbjct: 141 INGGEL-FTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVV 199
Query: 607 VGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVII 646
+ D GL+K A+ + GT+ Y+AP I+
Sbjct: 200 LTDFGLSKEF-------VADETERAYDFCGTIEYMAPDIV 232
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 60/147 (40%), Gaps = 21/147 (14%)
Query: 488 IREGGFNIVY--------NVAMKVA-----NLKQKEASRSFAAEFNALRNIRHRNLIKII 534
I EG F V+ N AM VA N F E +R H +++K+I
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 535 TICSS----IDFEGFDFKAI-SNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVH 589
+ + I E + S Q+R +L L + A ++ A+ YL VH
Sbjct: 458 GVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK---RFVH 514
Query: 590 GDLKPSNILLDQDVVTHVGDLGLAKFL 616
D+ N+L+ +GD GL++++
Sbjct: 515 RDIAARNVLVSATDCVKLGDFGLSRYM 541
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 31/50 (62%), Gaps = 2/50 (4%)
Query: 567 NIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFL 616
IA+ + A+E+L H + S++H D+KPSN+L++ D G++ +L
Sbjct: 140 KIAVSIVKALEHL--HSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYL 187
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 61/147 (41%), Gaps = 21/147 (14%)
Query: 488 IREGGFNIVY--------NVAMKVA-----NLKQKEASRSFAAEFNALRNIRHRNLIKII 534
I EG F V+ N A+ VA N F E +R H +++K+I
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 535 TICSS----IDFEGFDFKAI-SNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVH 589
+ + I E + S Q+R +L L + A ++ A+ YL VH
Sbjct: 75 GVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFVH 131
Query: 590 GDLKPSNILLDQDVVTHVGDLGLAKFL 616
D+ N+L+ + +GD GL++++
Sbjct: 132 RDIAARNVLVSSNDCVKLGDFGLSRYM 158
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 70/152 (46%), Gaps = 23/152 (15%)
Query: 480 NNFSPANKIREGGFNIVYNVAMKVANLKQKEASRSFAAEFN-ALRNIRHRNLIKIITICS 538
++F +++ G +V+ V+ K + L A + E A+RN R L +++ C+
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVM--ARKLIHLEIKPAIRNQIIREL-QVLHECN 62
Query: 539 SIDFEGFDFKAISNGQLRLC-----NLSLTQRVN------------IAIDVAFAIEYLRH 581
S GF S+G++ +C SL Q + ++I V + YLR
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 582 HCQPSIVHGDLKPSNILLDQDVVTHVGDLGLA 613
+ I+H D+KPSNIL++ + D G++
Sbjct: 123 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 80/213 (37%), Gaps = 40/213 (18%)
Query: 454 AHKDSNMLSMKQQFPMISHAELSKATNNFSPANKIREGGFNIVY---------NVAMKV- 503
A K N S K+Q+ A +F + +G F VY +A+KV
Sbjct: 18 ASKQKNEESKKRQW----------ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVL 67
Query: 504 --ANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSID-----FEGFDFKAISNGQLR 556
A L++ E ++RH N++++ E + +
Sbjct: 68 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK 127
Query: 557 LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFL 616
L + ++A A+ Y H + ++H D+KP N+LL G+L +A F
Sbjct: 128 LSKFDEQRTATYITELANALSYC--HSK-RVIHRDIKPENLLLGS-----AGELKIADFG 179
Query: 617 YGYEPGTTAETASSSIGINGTVGYVAPVIIAAR 649
+ ++ T + GT+ Y+ P +I R
Sbjct: 180 WSVHAPSSRRTT-----LCGTLDYLPPEMIEGR 207
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 61/147 (41%), Gaps = 21/147 (14%)
Query: 488 IREGGFNIVY--------NVAMKVA-----NLKQKEASRSFAAEFNALRNIRHRNLIKII 534
I EG F V+ N A+ VA N F E +R H +++K+I
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 535 TICSS----IDFEGFDFKAI-SNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVH 589
+ + I E + S Q+R +L L + A ++ A+ YL VH
Sbjct: 80 GVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFVH 136
Query: 590 GDLKPSNILLDQDVVTHVGDLGLAKFL 616
D+ N+L+ + +GD GL++++
Sbjct: 137 RDIAARNVLVSSNDCVKLGDFGLSRYM 163
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 34.3 bits (77), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 70/152 (46%), Gaps = 23/152 (15%)
Query: 480 NNFSPANKIREGGFNIVYNVAMKVANLKQKEASRSFAAEFN-ALRNIRHRNLIKIITICS 538
++F +++ G +V+ V+ K + L A + E A+RN R L +++ C+
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVM--ARKLIHLEIKPAIRNQIIREL-QVLHECN 62
Query: 539 SIDFEGFDFKAISNGQLRLC-----NLSLTQRVN------------IAIDVAFAIEYLRH 581
S GF S+G++ +C SL Q + ++I V + YLR
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 582 HCQPSIVHGDLKPSNILLDQDVVTHVGDLGLA 613
+ I+H D+KPSNIL++ + D G++
Sbjct: 123 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 34.3 bits (77), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 70/152 (46%), Gaps = 23/152 (15%)
Query: 480 NNFSPANKIREGGFNIVYNVAMKVANLKQKEASRSFAAEFN-ALRNIRHRNLIKIITICS 538
++F +++ G +V+ V+ K + L A + E A+RN R L +++ C+
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVM--ARKLIHLEIKPAIRNQIIREL-QVLHECN 62
Query: 539 SIDFEGFDFKAISNGQLRLC-----NLSLTQRVN------------IAIDVAFAIEYLRH 581
S GF S+G++ +C SL Q + ++I V + YLR
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 582 HCQPSIVHGDLKPSNILLDQDVVTHVGDLGLA 613
+ I+H D+KPSNIL++ + D G++
Sbjct: 123 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 34.3 bits (77), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 54/133 (40%), Gaps = 17/133 (12%)
Query: 498 NVAMKVANLKQKEAS-RSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQL- 555
VA+K NL++ + S E A+ H N++ T D K +S G +
Sbjct: 37 KVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVL 96
Query: 556 ------------RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDV 603
+ L + I +V +EYL + Q +H D+K NILL +D
Sbjct: 97 DIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGEDG 153
Query: 604 VTHVGDLGLAKFL 616
+ D G++ FL
Sbjct: 154 SVQIADFGVSAFL 166
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 34.3 bits (77), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 33/63 (52%), Gaps = 7/63 (11%)
Query: 584 QPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAP 643
Q IVH DLKP+N L+ D + + D G+A + +P TT+ S + G V Y+ P
Sbjct: 173 QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQM---QPDTTSVVKDSQV---GAVNYMPP 225
Query: 644 VII 646
I
Sbjct: 226 EAI 228
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 34.3 bits (77), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 70/152 (46%), Gaps = 23/152 (15%)
Query: 480 NNFSPANKIREGGFNIVYNVAMKVANLKQKEASRSFAAEFN-ALRNIRHRNLIKIITICS 538
++F +++ G +V+ V+ K + L A + E A+RN R L +++ C+
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVM--ARKLIHLEIKPAIRNQIIREL-QVLHECN 81
Query: 539 SIDFEGFDFKAISNGQLRLC-----NLSLTQRVN------------IAIDVAFAIEYLRH 581
S GF S+G++ +C SL Q + ++I V + YLR
Sbjct: 82 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 141
Query: 582 HCQPSIVHGDLKPSNILLDQDVVTHVGDLGLA 613
+ I+H D+KPSNIL++ + D G++
Sbjct: 142 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 171
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 34.3 bits (77), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 70/152 (46%), Gaps = 23/152 (15%)
Query: 480 NNFSPANKIREGGFNIVYNVAMKVANLKQKEASRSFAAEFN-ALRNIRHRNLIKIITICS 538
++F +++ G +V+ V+ K + L A + E A+RN R L +++ C+
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVM--ARKLIHLEIKPAIRNQIIREL-QVLHECN 124
Query: 539 SIDFEGFDFKAISNGQLRLC-----NLSLTQRVN------------IAIDVAFAIEYLRH 581
S GF S+G++ +C SL Q + ++I V + YLR
Sbjct: 125 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 184
Query: 582 HCQPSIVHGDLKPSNILLDQDVVTHVGDLGLA 613
+ I+H D+KPSNIL++ + D G++
Sbjct: 185 KHK--IMHRDVKPSNILVNSRGEIKLCDFGVS 214
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 11/92 (11%)
Query: 559 NLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618
L++ A ++ +++L IV+ DLK NILLD+D + D G+ K
Sbjct: 114 KFDLSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCK---- 166
Query: 619 YEPGTTAETASSSIGINGTVGYVAPVIIAARN 650
+ + GT Y+AP I+ +
Sbjct: 167 ----ENMLGDAKTNXFCGTPDYIAPEILLGQK 194
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 70/152 (46%), Gaps = 23/152 (15%)
Query: 480 NNFSPANKIREGGFNIVYNVAMKVANLKQKEASRSFAAEFN-ALRNIRHRNLIKIITICS 538
++F +++ G +V+ V+ K + L A + E A+RN R L +++ C+
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVM--ARKLIHLEIKPAIRNQIIREL-QVLHECN 65
Query: 539 SIDFEGFDFKAISNGQLRLC-----NLSLTQRVN------------IAIDVAFAIEYLRH 581
S GF S+G++ +C SL Q + ++I V + YLR
Sbjct: 66 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 125
Query: 582 HCQPSIVHGDLKPSNILLDQDVVTHVGDLGLA 613
+ I+H D+KPSNIL++ + D G++
Sbjct: 126 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 155
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 70/152 (46%), Gaps = 23/152 (15%)
Query: 480 NNFSPANKIREGGFNIVYNVAMKVANLKQKEASRSFAAEFN-ALRNIRHRNLIKIITICS 538
++F +++ G +V+ V+ K + L A + E A+RN R L +++ C+
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVM--ARKLIHLEIKPAIRNQIIREL-QVLHECN 62
Query: 539 SIDFEGFDFKAISNGQLRLC-----NLSLTQRVN------------IAIDVAFAIEYLRH 581
S GF S+G++ +C SL Q + ++I V + YLR
Sbjct: 63 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 122
Query: 582 HCQPSIVHGDLKPSNILLDQDVVTHVGDLGLA 613
+ I+H D+KPSNIL++ + D G++
Sbjct: 123 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 65/163 (39%), Gaps = 17/163 (10%)
Query: 498 NVAMKVANLK---QKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQ 554
+VA+ + LK ++ R F E + + H N++ + + + + + NG
Sbjct: 71 DVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGA 130
Query: 555 LRLC------NLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVG 608
L ++ Q V + +A + YL VH DL NIL++ ++V V
Sbjct: 131 LDAFLRKHDGQFTVIQLVGMLRGIAAGMRYL---ADMGYVHRDLAARNILVNSNLVCKVS 187
Query: 609 DLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNL 651
D GL++ + E ++ G V + AP I R
Sbjct: 188 DFGLSRVI-----EDDPEAVYTTTGGKIPVRWTAPEAIQYRKF 225
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 12/76 (15%)
Query: 575 AIEYLRHHCQP-------SIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAET 627
AIE + CQ I+H D+KP+NI++ V D G+A+ + + +
Sbjct: 118 AIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAI-----ADSGNS 172
Query: 628 ASSSIGINGTVGYVAP 643
+ + + GT Y++P
Sbjct: 173 VTQTAAVIGTAQYLSP 188
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 33.9 bits (76), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 70/152 (46%), Gaps = 23/152 (15%)
Query: 480 NNFSPANKIREGGFNIVYNVAMKVANLKQKEASRSFAAEFN-ALRNIRHRNLIKIITICS 538
++F +++ G +V+ V+ K + L A + E A+RN R L +++ C+
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVM--ARKLIHLEIKPAIRNQIIREL-QVLHECN 89
Query: 539 SIDFEGFDFKAISNGQLRLC-----NLSLTQRVN------------IAIDVAFAIEYLRH 581
S GF S+G++ +C SL Q + ++I V + YLR
Sbjct: 90 SPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLRE 149
Query: 582 HCQPSIVHGDLKPSNILLDQDVVTHVGDLGLA 613
+ I+H D+KPSNIL++ + D G++
Sbjct: 150 --KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 179
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 33.9 bits (76), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 15/82 (18%)
Query: 575 AIEYLRHHCQPSIVHGDLKPSNILL---DQDVVTHVGDLGLAKFLYGYEPGTTAETASSS 631
+ YL H +IVH DLKP N+LL ++D + + D GL+ E
Sbjct: 148 GVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVF---------ENQKKM 195
Query: 632 IGINGTVGYVAPVIIAARNLEN 653
GT Y+AP ++ + E
Sbjct: 196 KERLGTAYYIAPEVLRKKYDEK 217
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 33.9 bits (76), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 12/76 (15%)
Query: 575 AIEYLRHHCQP-------SIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAET 627
AIE + CQ I+H D+KP+NI++ V D G+A+ + + +
Sbjct: 118 AIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAI-----ADSGNS 172
Query: 628 ASSSIGINGTVGYVAP 643
+ + + GT Y++P
Sbjct: 173 VTQTAAVIGTAQYLSP 188
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 33.9 bits (76), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 12/76 (15%)
Query: 575 AIEYLRHHCQP-------SIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAET 627
AIE + CQ I+H D+KP+NI++ V D G+A+ + + +
Sbjct: 118 AIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAI-----ADSGNS 172
Query: 628 ASSSIGINGTVGYVAP 643
+ + + GT Y++P
Sbjct: 173 VTQTAAVIGTAQYLSP 188
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 33.9 bits (76), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 67/156 (42%), Gaps = 29/156 (18%)
Query: 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAA--EFNALRNIRHR 528
+ KI EG + V+ VA+K L + +A E L+ ++H+
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 529 NLIKIITICSS-------IDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRH 581
N++++ + S +F D K + CN L + I +F + L+
Sbjct: 62 NIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDS----CNGDL----DPEIVKSFLFQLLKG 113
Query: 582 --HCQP-SIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
C +++H DLKP N+L++++ + D GLA+
Sbjct: 114 LGFCHSRNVLHRDLKPQNLLINRNGELKLADFGLAR 149
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 33.9 bits (76), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 69/186 (37%), Gaps = 30/186 (16%)
Query: 490 EGGFNIVYNV---------AMKVANLKQKEASRSFAAEFNALRNIR-HRNLIKIITICSS 539
EGGF VY A+K ++E +R+ E ++ + H N+++ + +S
Sbjct: 38 EGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCS-AAS 96
Query: 540 IDFEGFD--------FKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLR-------HHCQ 584
I E D + GQL + R ++ D I Y H +
Sbjct: 97 IGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQK 156
Query: 585 PSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAET----ASSSIGINGTVGY 640
P I+H DLK N+LL + D G A + Y + + I N T Y
Sbjct: 157 PPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMY 216
Query: 641 VAPVII 646
P II
Sbjct: 217 RTPEII 222
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 33.9 bits (76), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 40/200 (20%), Positives = 74/200 (37%), Gaps = 44/200 (22%)
Query: 481 NFSPANKIREGGFNIVYNVAMKVANL-----KQKEASRSFAAEFNALRNIRHRNLIKIIT 535
+F I GGF V+ ++ + K + E AL + H N++
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKALAKLDHVNIVHY-N 70
Query: 536 ICSSIDFEGFDFKAISNG-------------QLRLCNLS-----LTQRVNIAIDVAFAIE 577
C ++GFD+ ++ Q+ C+ + +R +D A+E
Sbjct: 71 GC----WDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALE 126
Query: 578 YLRHHCQ-------PSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASS 630
+ +++ DLKPSNI L +GD GL T+ +
Sbjct: 127 LFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLV---------TSLKNDGK 177
Query: 631 SIGINGTVGYVAPVIIAARN 650
GT+ Y++P I++++
Sbjct: 178 RXRSKGTLRYMSPEQISSQD 197
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 33.9 bits (76), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 69/165 (41%), Gaps = 24/165 (14%)
Query: 498 NVAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISN----- 552
NVA+K+ + + +++ +N + +RH N++ I + I++
Sbjct: 62 NVAVKIFSSRDEKSWFRETELYNTVM-LRHENILGFIASDMTSRHSSTQLWLITHYHEMG 120
Query: 553 ---GQLRLCNLSLTQRVNIAIDVA-----FAIEYLRHHCQPSIVHGDLKPSNILLDQDVV 604
L+L L + I + +A IE +P+I H DLK NIL+ ++
Sbjct: 121 SLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQ 180
Query: 605 THVGDLGLAKFLYGYEPGTTAETASSSIGINGTVG---YVAPVII 646
+ DLGLA + T +G N VG Y+AP ++
Sbjct: 181 CCIADLGLAVM-------HSQSTNQLDVGNNPRVGTKRYMAPEVL 218
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 33.9 bits (76), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 80/195 (41%), Gaps = 32/195 (16%)
Query: 473 AELSKATNNFSPANKIREGGFNIVY---------NVAMKV---ANLKQKEASRSFAAEFN 520
A+ A +F + +G F VY +A+KV A L++ E
Sbjct: 1 AKRQWALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 521 ALRNIRHRNLIKIITIC--SSIDFEGFDFKAISNGQLRLCNLSL--TQRVNIAI-DVAFA 575
++RH N++++ S+ + ++ + L LS QR I ++A A
Sbjct: 61 IQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 120
Query: 576 IEYLRHHCQ-PSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGI 634
+ Y C ++H D+KP N+LL G+L +A F + + +S +
Sbjct: 121 LSY----CHSKKVIHRDIKPENLLLGS-----AGELKIADFGW-----SVHAPSSRRAAL 166
Query: 635 NGTVGYVAPVIIAAR 649
GT+ Y+ P +I R
Sbjct: 167 CGTLDYLPPEMIEGR 181
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 33.9 bits (76), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 12/76 (15%)
Query: 575 AIEYLRHHCQP-------SIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAET 627
AIE + CQ I+H D+KP+NI++ V D G+A+ + + +
Sbjct: 118 AIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAI-----ADSGNS 172
Query: 628 ASSSIGINGTVGYVAP 643
+ + + GT Y++P
Sbjct: 173 VTQTAAVIGTAQYLSP 188
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 33.9 bits (76), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 12/76 (15%)
Query: 575 AIEYLRHHCQP-------SIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAET 627
AIE + CQ I+H D+KP+NI++ V D G+A+ + + +
Sbjct: 135 AIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAI-----ADSGNS 189
Query: 628 ASSSIGINGTVGYVAP 643
+ + + GT Y++P
Sbjct: 190 VTQTAAVIGTAQYLSP 205
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 85/213 (39%), Gaps = 40/213 (18%)
Query: 454 AHKDSNMLSMKQQFPMISHAELSKATNNFSPANKIREGGFNIVY---------NVAMKV- 503
A K N S K+Q+ A +F + +G F VY +A+KV
Sbjct: 9 ASKQKNEESKKRQW----------ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVL 58
Query: 504 --ANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSID--FEGFDFKAISNGQLRLCN 559
A L++ E ++RH N++++ + ++ + L
Sbjct: 59 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK 118
Query: 560 LSL--TQRVNIAI-DVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFL 616
LS QR I ++A A+ Y H + ++H D+KP N+LL G+L +A F
Sbjct: 119 LSKFDEQRTATYITELANALSYC--HSK-RVIHRDIKPENLLLGS-----AGELKIADFG 170
Query: 617 YGYEPGTTAETASSSIGINGTVGYVAPVIIAAR 649
+ ++ T + GT+ Y+ P +I R
Sbjct: 171 WSVHAPSSRRTT-----LCGTLDYLPPEMIEGR 198
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 575 AIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVG--DLGLAKFLYGYE----PGTTAETA 628
A E L+H + SIVH D+KP NI+ + + V D GLA L E TAE A
Sbjct: 158 ACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFA 217
Query: 629 SSSIGINGTVGY 640
+ I VG+
Sbjct: 218 APEIVDREPVGF 229
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 33.5 bits (75), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 67/155 (43%), Gaps = 31/155 (20%)
Query: 509 KEASRSFAAEFNA---------LRNIRHRN---LIKIITICSSI-DFEGFDFKAI----S 551
K+ SR F +E A L++++H N L+ + T SS+ +F +DF +
Sbjct: 55 KKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF--YDFYLVMPFMQ 112
Query: 552 NGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLG 611
++ L ++ I V ++ L++ +VH DLKP N+ +++D + D G
Sbjct: 113 TDLQKIMGLKFSEE-KIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFG 171
Query: 612 LAKFLYGYEPGTTAETASSSIGINGTVGYVAPVII 646
LA+ + G T Y AP +I
Sbjct: 172 LAR-----------HADAEMTGYVVTRWYRAPEVI 195
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 33.5 bits (75), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 32/171 (18%), Positives = 67/171 (39%), Gaps = 33/171 (19%)
Query: 474 ELSKATNNFSPANKIREGGFNIVYN--------------VAMKVANLKQKEASR-SFAAE 518
E A + + ++ +G F +VY VA+K N R F E
Sbjct: 4 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 63
Query: 519 FNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLR---------------LCNLSLT 563
+ ++ ++++++ + S + ++ G L+ L SL+
Sbjct: 64 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 123
Query: 564 QRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
+ + +A ++A + YL + VH DL N ++ +D +GD G+ +
Sbjct: 124 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 171
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 581 HHC-QPSIVHGDLKPSNILLDQDVVTHVGDLGLA 613
+C Q IVH DLK N+LLD D+ + D G +
Sbjct: 128 QYCHQKRIVHRDLKAENLLLDADMNIKIADFGFS 161
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 581 HHC-QPSIVHGDLKPSNILLDQDVVTHVGDLGLA 613
+C Q IVH DLK N+LLD D+ + D G +
Sbjct: 125 QYCHQKRIVHRDLKAENLLLDADMNIKIADFGFS 158
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 33.5 bits (75), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Query: 561 SLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617
+L + + +A ++A + YL VH DL N ++ D +GD G+ + +Y
Sbjct: 127 TLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIY 180
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 80/213 (37%), Gaps = 40/213 (18%)
Query: 454 AHKDSNMLSMKQQFPMISHAELSKATNNFSPANKIREGGFNIVY---------NVAMKV- 503
A K N S K+Q+ A +F + +G F VY +A+KV
Sbjct: 18 ASKQKNEESKKRQW----------ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVL 67
Query: 504 --ANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSID-----FEGFDFKAISNGQLR 556
A L++ E ++RH N++++ E + +
Sbjct: 68 FKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK 127
Query: 557 LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFL 616
L + ++A A+ Y H + ++H D+KP N+LL G+L +A F
Sbjct: 128 LSKFDEQRTATYITELANALSYC--HSK-RVIHRDIKPENLLLGS-----AGELKIADFG 179
Query: 617 YGYEPGTTAETASSSIGINGTVGYVAPVIIAAR 649
+ + +S + GT+ Y+ P +I R
Sbjct: 180 W-----SVHAPSSRRDDLCGTLDYLPPEMIEGR 207
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 33.5 bits (75), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 15/100 (15%)
Query: 555 LRLCNLSLTQRVNIAIDVA-----FAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGD 609
L+L L + I + +A IE +P+I H DLK NIL+ ++ + D
Sbjct: 97 LQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIAD 156
Query: 610 LGLAKFLYGYEPGTTAETASSSIGINGTVG---YVAPVII 646
LGLA + T +G N VG Y+AP ++
Sbjct: 157 LGLAVM-------HSQSTNQLDVGNNPRVGTKRYMAPEVL 189
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 33.5 bits (75), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 12/76 (15%)
Query: 575 AIEYLRHHCQP-------SIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAET 627
AIE + CQ I+H D+KP+NIL+ V D G+A+ + + +
Sbjct: 118 AIEVIADACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAI-----ADSGNS 172
Query: 628 ASSSIGINGTVGYVAP 643
+ + GT Y++P
Sbjct: 173 VXQTAAVIGTAQYLSP 188
>pdb|4FHO|A Chain A, Crystal Structure Of An Internalin C2 (Inlc2) From
Listeria Monocytogenes Str. 4b F2365 At 1.90 A
Resolution
pdb|4FHO|B Chain B, Crystal Structure Of An Internalin C2 (Inlc2) From
Listeria Monocytogenes Str. 4b F2365 At 1.90 A
Resolution
Length = 231
Score = 33.5 bits (75), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 66/148 (44%), Gaps = 30/148 (20%)
Query: 171 NELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRN 230
N++ + L N +K+ L + N + V +IA L S IK + + S +I+ P +
Sbjct: 79 NQITDLTPLKNLTKITELELSGNPLKNV--SAIAGLQS-IKTLDLTSTQITDVTP--LAG 133
Query: 231 LVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQ 290
L NL L ++ +Q I I PL G T NLQ L+IG N + N+L
Sbjct: 134 LSNLQVLYLDLNQ-ITNISPLAGLT-NLQYLSIGNNQV------------------NDL- 172
Query: 291 GNIPSSLANCKSLLGLSVSHNKLTSTLP 318
+ LAN L L NK++ P
Sbjct: 173 ----TPLANLSKLTTLRADDNKISDISP 196
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 33.5 bits (75), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 59/143 (41%), Gaps = 26/143 (18%)
Query: 518 EFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQL--RLCN---LSLTQRVNIAIDV 572
E + L+++ H N+IK+ + + + G+L ++ N NI +
Sbjct: 96 EISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQI 155
Query: 573 AFAIEYLRHHCQPSIVHGDLKPSNILLDQD---VVTHVGDLGLAKFLYGYEPGTTAETAS 629
I YL H +IVH D+KP NILL+ + + D GL+ F S
Sbjct: 156 LSGICYLHKH---NIVHRDIKPENILLENKNSLLNIKIVDFGLSSFF------------S 200
Query: 630 SSIGIN---GTVGYVAPVIIAAR 649
+ GT Y+AP ++ +
Sbjct: 201 KDYKLRDRLGTAYYIAPEVLKKK 223
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 33.5 bits (75), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 15/100 (15%)
Query: 555 LRLCNLSLTQRVNIAIDVA-----FAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGD 609
L+L L + I + +A IE +P+I H DLK NIL+ ++ + D
Sbjct: 97 LQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIAD 156
Query: 610 LGLAKFLYGYEPGTTAETASSSIGINGTVG---YVAPVII 646
LGLA + T +G N VG Y+AP ++
Sbjct: 157 LGLAVM-------HSQSTNQLDVGNNPRVGTKRYMAPEVL 189
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 33.5 bits (75), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 32/171 (18%), Positives = 67/171 (39%), Gaps = 33/171 (19%)
Query: 474 ELSKATNNFSPANKIREGGFNIVYN--------------VAMKVANLKQKEASR-SFAAE 518
E A + + ++ +G F +VY VA+K N R F E
Sbjct: 13 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 72
Query: 519 FNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLR---------------LCNLSLT 563
+ ++ ++++++ + S + ++ G L+ L SL+
Sbjct: 73 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLS 132
Query: 564 QRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
+ + +A ++A + YL + VH DL N ++ +D +GD G+ +
Sbjct: 133 KMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR 180
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 33.5 bits (75), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 39/189 (20%), Positives = 74/189 (39%), Gaps = 30/189 (15%)
Query: 478 ATNNFSPANKIREGGFNIVY---------NVAMKV---ANLKQKEASRSFAAEFNALRNI 525
A +F + +G F VY +A+KV A L++ E ++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 526 RHRNLIKIITICSSIDFEGFDFKAISNGQL-----RLCNLSLTQRVNIAIDVAFAIEYLR 580
RH N++++ + G++ +L + ++A A+ Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYC- 129
Query: 581 HHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGY 640
H + ++H D+KP N+LL G+L +A F + + +S + GT+ Y
Sbjct: 130 -HSK-RVIHRDIKPENLLLGS-----AGELKIADFGW-----SVHAPSSRRXXLXGTLDY 177
Query: 641 VAPVIIAAR 649
+ P +I R
Sbjct: 178 LPPEMIEGR 186
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 33.5 bits (75), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Query: 561 SLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617
+L + + +A ++A + YL VH DL N ++ D +GD G+ + +Y
Sbjct: 128 TLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIY 181
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 33.5 bits (75), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 10/64 (15%)
Query: 587 IVHGDLKPSNILLDQDVVTHVGDLGLA-KFLYGYEPGTTAETASSSIGINGTVGYVAPVI 645
++H DLK N+ L+ D+ +GD GLA K + E T + GT Y+AP +
Sbjct: 163 VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT---------LCGTPNYIAPEV 213
Query: 646 IAAR 649
+ +
Sbjct: 214 LCKK 217
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 33.5 bits (75), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 74/183 (40%), Gaps = 26/183 (14%)
Query: 482 FSPANKIREGGFNIVY---------NVAMKVANLKQKEASRSFA---AEFNALRNIRHRN 529
FS +I G F VY VA+K + K+++ + E L+ +RH N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 530 LIKI--ITICSSIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSI 587
I+ + + ++ S L + Q V IA A++ L + ++
Sbjct: 116 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNM 175
Query: 588 VHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIA 647
+H D+K NILL + + +GD G +A + + GT ++AP +I
Sbjct: 176 IHRDVKAGNILLSEPGLVKLGDFG------------SASIMAPANXFVGTPYWMAPEVIL 223
Query: 648 ARN 650
A +
Sbjct: 224 AMD 226
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 33.5 bits (75), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Query: 587 IVHGDLKPSNILLDQDVVTHVGDLGLAK-FLYGYEPGTTAETASSSIGINGTVGYVAPVI 645
I H D+KP N+LLD+ + D GLA F Y E + + GT+ YVAP +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRY-----NNRERLLNK--MXGTLPYVAPEL 177
Query: 646 IAARNL 651
+ R
Sbjct: 178 LKRREF 183
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 33.5 bits (75), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Query: 587 IVHGDLKPSNILLDQDVVTHVGDLGLAK-FLYGYEPGTTAETASSSIGINGTVGYVAPVI 645
I H D+KP N+LLD+ + D GLA F Y E + + GT+ YVAP +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRY-----NNRERLLNK--MXGTLPYVAPEL 177
Query: 646 IAARNL 651
+ R
Sbjct: 178 LKRREF 183
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 33.1 bits (74), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 587 IVHGDLKPSNILLDQDVVTHVGDLGLAK-FLYGYEPGTTAETASSSIGINGTVGYVAPVI 645
I H D+KP N+LLD+ + D GLA F Y + + GT+ YVAP +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK-------MXGTLPYVAPEL 177
Query: 646 IAARNL 651
+ R
Sbjct: 178 LKRREF 183
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Query: 587 IVHGDLKPSNILLDQDVVTHVGDLGLAK-FLYGYEPGTTAETASSSIGINGTVGYVAPVI 645
I H D+KP N+LLD+ + D GLA F Y E + + GT+ YVAP +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRY-----NNRERLLNK--MXGTLPYVAPEL 178
Query: 646 IAARNL 651
+ R
Sbjct: 179 LKRREF 184
>pdb|2ID5|A Chain A, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|B Chain B, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|C Chain C, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|D Chain D, Crystal Structure Of The Lingo-1 Ectodomain
Length = 477
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 75/160 (46%), Gaps = 18/160 (11%)
Query: 158 LNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGS 217
L+LG N + T N+ +F + LE L N N V P + NL + ++ + + S
Sbjct: 37 LDLGKNRIK--TLNQDEFASF----PHLEELELNENIVSAVEPGAFNNLFN-LRTLGLRS 89
Query: 218 NRISSTIPHGI-RNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGN------HLQG 270
NR+ IP G+ L NL L + ++++ + + + NL+ L +G N H
Sbjct: 90 NRLK-LIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAF 148
Query: 271 SILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSH 310
S L+SL LTL+ NL +L++ L+ L + H
Sbjct: 149 SGLNSLEQLTLEKC---NLTSIPTEALSHLHGLIVLRLRH 185
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 33.1 bits (74), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 59/123 (47%), Gaps = 20/123 (16%)
Query: 509 KEASRSFAAEFNA---------LRNIRHRN---LIKIITICSSI-DFEGFDFKAI----S 551
K+ SR F +E A L++++H N L+ + T SS+ +F +DF +
Sbjct: 73 KKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF--YDFYLVMPFMQ 130
Query: 552 NGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLG 611
++ + ++ I V ++ L++ +VH DLKP N+ +++D + D G
Sbjct: 131 TDLQKIMGMEFSEE-KIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFG 189
Query: 612 LAK 614
LA+
Sbjct: 190 LAR 192
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 33.1 bits (74), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 56/138 (40%), Gaps = 20/138 (14%)
Query: 517 AEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLRLCNLSLTQR--------VNI 568
AE N ++ + + ++++I IC + + + +L N L Q + +
Sbjct: 61 AEANVMQQLDNPYIVRMIGICEAESW----MLVMEMAELGPLNKYLQQNRHVKDKNIIEL 116
Query: 569 AIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETA 628
V+ ++YL + + VH DL N+LL + D GL+K L E A+T
Sbjct: 117 VHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTH 173
Query: 629 SSSIGINGTVGYVAPVII 646
V + AP I
Sbjct: 174 GK-----WPVKWYAPECI 186
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 33.1 bits (74), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 66/142 (46%), Gaps = 18/142 (12%)
Query: 511 ASRSFAAEFNALRNIRHRNLIKIITICS-SIDFEGF-DFKAISNGQ-LRLCNLSLTQRV- 566
A R++ E L++++H N+I ++ + + + E F D +++ L N+ +Q++
Sbjct: 65 AKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLT 123
Query: 567 --NIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTT 624
++ + + L++ I+H DLKPSN+ +++D + D GL +
Sbjct: 124 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLCR---------- 173
Query: 625 AETASSSIGINGTVGYVAPVII 646
T G T Y AP I+
Sbjct: 174 -HTDDEMTGYVATRWYRAPEIM 194
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Query: 587 IVHGDLKPSNILLDQDVVTHVGDLGLAK-FLYGYEPGTTAETASSSIGINGTVGYVAPVI 645
I H D+KP N+LLD+ + D GLA F Y E + + GT+ YVAP +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRY-----NNRERLLNK--MXGTLPYVAPEL 177
Query: 646 IAARNL 651
+ R
Sbjct: 178 LKRREF 183
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 14/110 (12%)
Query: 514 SFAAEFNALRNIRHRNLIKIITICSSIDFEG---FDFKAISNGQLR------LCNLSLTQ 564
F E +++ H N++ ++ IC + EG + +G LR N ++
Sbjct: 78 QFLTEGIIMKDFSHPNVLSLLGIC--LRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD 135
Query: 565 RVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
+ + VA +++L VH DL N +LD+ V D GLA+
Sbjct: 136 LIGFGLQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR 182
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 33.1 bits (74), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 10/64 (15%)
Query: 587 IVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAE-TASSSIGINGTVGYVAPVI 645
++H DLK N+ L+ D+ +GD GLA T E + GT Y+AP +
Sbjct: 147 VIHRDLKLGNLFLNDDMDVKIGDFGLA---------TKIEFDGERKKDLCGTPNYIAPEV 197
Query: 646 IAAR 649
+ +
Sbjct: 198 LCKK 201
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 33.1 bits (74), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 581 HHC-QPSIVHGDLKPSNILLDQDVVTHVGDLGLA-KFLYG 618
+C Q IVH DLK N+LLD D + D G + +F +G
Sbjct: 127 QYCHQKFIVHRDLKAENLLLDADXNIKIADFGFSNEFTFG 166
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 33.1 bits (74), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 59/129 (45%), Gaps = 22/129 (17%)
Query: 498 NVAMKVANLKQKEAS--RSFAAEFNALRNIRHRNLIKIITICSS-------IDF----EG 544
VA+K+ + Q + + E ++ + H N++K+ + + +++ E
Sbjct: 42 EVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEV 101
Query: 545 FDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVV 604
FD+ +++G+++ R + A++Y Q IVH DLK N+LLD D+
Sbjct: 102 FDY-LVAHGRMKEKEARAKFR-----QIVSAVQYCH---QKYIVHRDLKAENLLLDGDMN 152
Query: 605 THVGDLGLA 613
+ D G +
Sbjct: 153 IKIADFGFS 161
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 33.1 bits (74), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 77/190 (40%), Gaps = 32/190 (16%)
Query: 478 ATNNFSPANKIREGGFNIVY---------NVAMKV---ANLKQKEASRSFAAEFNALRNI 525
A +F + +G F VY +A+KV A L++ E ++
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 526 RHRNLIKIITICSSID--FEGFDFKAISNGQLRLCNLSL--TQRVNIAI-DVAFAIEYLR 580
RH N++++ + ++ + L LS QR I ++A A+ Y
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY-- 124
Query: 581 HHCQPS-IVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVG 639
C ++H D+KP N+LL G+L +A F + ++ T ++GT+
Sbjct: 125 --CHSKRVIHRDIKPENLLLGS-----AGELKIADFGWSCHAPSSRRTT-----LSGTLD 172
Query: 640 YVAPVIIAAR 649
Y+ P +I R
Sbjct: 173 YLPPEMIEGR 182
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 33.1 bits (74), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 35/67 (52%), Gaps = 12/67 (17%)
Query: 584 QPSIVHGDLKPSNILLDQDVVTHVGDLGLA-KFLYGYEPGTTAETASSSIGINGTVG--- 639
+P+I H DLK NIL+ ++ + DLGLA KF+ ++T I N VG
Sbjct: 160 KPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFI--------SDTNEVDIPPNTRVGTKR 211
Query: 640 YVAPVII 646
Y+ P ++
Sbjct: 212 YMPPEVL 218
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 33.1 bits (74), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 587 IVHGDLKPSNILLDQDVVTHVGDLGLAK-FLYGYEPGTTAETASSSIGINGTVGYVAPVI 645
I H D+KP N+LLD+ + D GLA F Y + GT+ YVAP +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-------GTLPYVAPEL 177
Query: 646 IAARNL 651
+ R
Sbjct: 178 LKRREF 183
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 33.1 bits (74), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 587 IVHGDLKPSNILLDQDVVTHVGDLGLAK-FLYGYEPGTTAETASSSIGINGTVGYVAPVI 645
I H D+KP N+LLD+ + D GLA F Y + GT+ YVAP +
Sbjct: 124 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-------GTLPYVAPEL 176
Query: 646 IAARNL 651
+ R
Sbjct: 177 LKRREF 182
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 33.1 bits (74), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 587 IVHGDLKPSNILLDQDVVTHVGDLGLAK-FLYGYEPGTTAETASSSIGINGTVGYVAPVI 645
I H D+KP N+LLD+ + D GLA F Y + GT+ YVAP +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-------GTLPYVAPEL 177
Query: 646 IAARNL 651
+ R
Sbjct: 178 LKRREF 183
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 33.1 bits (74), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 587 IVHGDLKPSNILLDQDVVTHVGDLGLAK-FLYGYEPGTTAETASSSIGINGTVGYVAPVI 645
I H D+KP N+LLD+ + D GLA F Y + GT+ YVAP +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-------GTLPYVAPEL 178
Query: 646 IAARNL 651
+ R
Sbjct: 179 LKRREF 184
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 33.1 bits (74), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 85/208 (40%), Gaps = 38/208 (18%)
Query: 463 MKQQFPMISHAELSKAT-------NNFSPANKIREGGFNIVYNV--AMKVANLKQKEASR 513
M Q+ P EL+K N SP G ++ ++VA K+ SR
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVA---VKKLSR 57
Query: 514 SFAA---------EFNALRNIRHRNLIKIITICS-SIDFEGF-DFKAISNGQ-LRLCNLS 561
F + E L++++H N+I ++ + + + E F D +++ L N+
Sbjct: 58 PFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 117
Query: 562 LTQRV---NIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618
Q++ ++ + + L++ I+H DLKPSN+ +++D + GLA+
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLAR---- 173
Query: 619 YEPGTTAETASSSIGINGTVGYVAPVII 646
T G T Y AP I+
Sbjct: 174 -------HTDDEMTGYVATRWYRAPEIM 194
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.7 bits (73), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 587 IVHGDLKPSNILLDQDVVTHVGDLGLAK-FLYGYEPGTTAETASSSIGINGTVGYVAPVI 645
I H D+KP N+LLD+ + D GLA F Y + GT+ YVAP +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-------GTLPYVAPEL 177
Query: 646 IAARNL 651
+ R
Sbjct: 178 LKRREF 183
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 32.7 bits (73), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 587 IVHGDLKPSNILLDQDVVTHVGDLGLAK-FLYGYEPGTTAETASSSIGINGTVGYVAPVI 645
I H D+KP N+LLD+ + D GLA F Y + GT+ YVAP +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-------GTLPYVAPEL 177
Query: 646 IAARNL 651
+ R
Sbjct: 178 LKRREF 183
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 32.7 bits (73), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 587 IVHGDLKPSNILLDQDVVTHVGDLGLAK-FLYGYEPGTTAETASSSIGINGTVGYVAPVI 645
I H D+KP N+LLD+ + D GLA F Y + GT+ YVAP +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-------GTLPYVAPEL 178
Query: 646 IAARNL 651
+ R
Sbjct: 179 LKRREF 184
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 32.7 bits (73), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 587 IVHGDLKPSNILLDQDVVTHVGDLGLAK-FLYGYEPGTTAETASSSIGINGTVGYVAPVI 645
I H D+KP N+LLD+ + D GLA F Y + GT+ YVAP +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-------GTLPYVAPEL 178
Query: 646 IAARNL 651
+ R
Sbjct: 179 LKRREF 184
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.7 bits (73), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 587 IVHGDLKPSNILLDQDVVTHVGDLGLAK-FLYGYEPGTTAETASSSIGINGTVGYVAPVI 645
I H D+KP N+LLD+ + D GLA F Y + GT+ YVAP +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-------GTLPYVAPEL 177
Query: 646 IAARNL 651
+ R
Sbjct: 178 LKRREF 183
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 32.7 bits (73), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 587 IVHGDLKPSNILLDQDVVTHVGDLGLAK-FLYGYEPGTTAETASSSIGINGTVGYVAPVI 645
I H D+KP N+LLD+ + D GLA F Y + GT+ YVAP +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-------GTLPYVAPEL 177
Query: 646 IAARNL 651
+ R
Sbjct: 178 LKRREF 183
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 32.7 bits (73), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 39/190 (20%), Positives = 73/190 (38%), Gaps = 32/190 (16%)
Query: 478 ATNNFSPANKIREGGFNIVY---------NVAMKV---ANLKQKEASRSFAAEFNALRNI 525
A +F + +G F VY +A+KV A L++ E ++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 526 RHRNLIKIITICSSIDFEGFDFKAISNGQL-----RLCNLSLTQRVNIAIDVAFAIEYLR 580
RH N++++ + G++ +L + ++A A+ Y
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSY-- 128
Query: 581 HHCQPS-IVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVG 639
C ++H D+KP N+LL G+L +A F + ++ T + GT+
Sbjct: 129 --CHSKRVIHRDIKPENLLLGS-----AGELKIADFGWSVHAPSSRRTT-----LCGTLD 176
Query: 640 YVAPVIIAAR 649
Y+ P +I R
Sbjct: 177 YLPPEMIEGR 186
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 32.7 bits (73), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 587 IVHGDLKPSNILLDQDVVTHVGDLGLAK-FLYGYEPGTTAETASSSIGINGTVGYVAPVI 645
I H D+KP N+LLD+ + D GLA F Y + GT+ YVAP +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-------GTLPYVAPEL 177
Query: 646 IAARNL 651
+ R
Sbjct: 178 LKRREF 183
>pdb|1XKU|A Chain A, Crystal Structure Of The Dimeric Protein Core Of Decorin,
The Archetypal Small Leucine-Rich Repeat Proteoglycan
Length = 330
Score = 32.7 bits (73), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 90/210 (42%), Gaps = 40/210 (19%)
Query: 133 MIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNR 192
+++ N+ + DF LKNL L L N + + F L+ KLERLY ++
Sbjct: 56 LLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGA--FAPLV----KLERLYLSK 109
Query: 193 NGFEGV---LPHSIANLSSTIKQIA-----------------MGSNRISSTIPHGIRN-- 230
N + + +P ++ L +I +G+N + S+ GI N
Sbjct: 110 NQLKELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSS---GIENGA 166
Query: 231 ---LVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHL---QGSILSSLGNLTLQTY 284
+ L+++ + + I TIP G P+L L++ GN + + L L NL
Sbjct: 167 FQGMKKLSYIRIADTN-ITTIPQ--GLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGL 223
Query: 285 LFNNLQGNIPSSLANCKSLLGLSVSHNKLT 314
FN++ SLAN L L +++NKL
Sbjct: 224 SFNSISAVDNGSLANTPHLRELHLNNNKLV 253
>pdb|1XCD|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 1
pdb|1XEC|A Chain A, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 2
pdb|1XEC|B Chain B, Dimeric Bovine Tissue-Extracted Decorin, Crystal Form 2
Length = 329
Score = 32.7 bits (73), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 90/210 (42%), Gaps = 40/210 (19%)
Query: 133 MIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNR 192
+++ N+ + DF LKNL L L N + + F L+ KLERLY ++
Sbjct: 56 LLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGA--FAPLV----KLERLYLSK 109
Query: 193 NGFEGV---LPHSIANLSSTIKQIA-----------------MGSNRISSTIPHGIRN-- 230
N + + +P ++ L +I +G+N + S+ GI N
Sbjct: 110 NQLKELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSS---GIENGA 166
Query: 231 ---LVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHL---QGSILSSLGNLTLQTY 284
+ L+++ + + I TIP G P+L L++ GN + + L L NL
Sbjct: 167 FQGMKKLSYIRIADTN-ITTIPQ--GLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGL 223
Query: 285 LFNNLQGNIPSSLANCKSLLGLSVSHNKLT 314
FN++ SLAN L L +++NKL
Sbjct: 224 SFNSISAVDNGSLANTPHLRELHLNNNKLV 253
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 56/138 (40%), Gaps = 20/138 (14%)
Query: 517 AEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLRLCNLSLTQR--------VNI 568
AE N ++ + + ++++I IC + + + +L N L Q + +
Sbjct: 75 AEANVMQQLDNPYIVRMIGICEAESW----MLVMEMAELGPLNKYLQQNRHVKDKNIIEL 130
Query: 569 AIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETA 628
V+ ++YL + + VH DL N+LL + D GL+K L E A+T
Sbjct: 131 VHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 187
Query: 629 SSSIGINGTVGYVAPVII 646
V + AP I
Sbjct: 188 GK-----WPVKWYAPECI 200
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 32.7 bits (73), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 587 IVHGDLKPSNILLDQDVVTHVGDLGLAK-FLYGYEPGTTAETASSSIGINGTVGYVAPVI 645
I H D+KP N+LLD+ + D GLA F Y + GT+ YVAP +
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-------GTLPYVAPEL 177
Query: 646 IAARNL 651
+ R
Sbjct: 178 LKRREF 183
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 32.7 bits (73), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 10/64 (15%)
Query: 587 IVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAE-TASSSIGINGTVGYVAPVI 645
++H DLK N+ L+ D+ +GD GLA T E + GT Y+AP +
Sbjct: 163 VIHRDLKLGNLFLNDDMDVKIGDFGLA---------TKIEFDGERKKDLCGTPNYIAPEV 213
Query: 646 IAAR 649
+ +
Sbjct: 214 LCKK 217
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 32.7 bits (73), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 63/148 (42%), Gaps = 11/148 (7%)
Query: 492 GFNIVYNVAMKVAN-LKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAI 550
G + VA+K+ N +A+ F E + ++ H +L++++ +C S + + +
Sbjct: 63 GETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLM 121
Query: 551 SNGQL------RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVV 604
+G L N+ +N + +A + YL +VH DL N+L+
Sbjct: 122 PHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNH 178
Query: 605 THVGDLGLAKFLYGYEPGTTAETASSSI 632
+ D GLA+ L G E A+ I
Sbjct: 179 VKITDFGLARLLEGDEKEYNADGGKMPI 206
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 32.7 bits (73), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 56/138 (40%), Gaps = 20/138 (14%)
Query: 517 AEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLRLCNLSLTQR--------VNI 568
AE N ++ + + ++++I IC + + + +L N L Q + +
Sbjct: 419 AEANVMQQLDNPYIVRMIGICEAESW----MLVMEMAELGPLNKYLQQNRHVKDKNIIEL 474
Query: 569 AIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETA 628
V+ ++YL + + VH DL N+LL + D GL+K L E A+T
Sbjct: 475 VHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 531
Query: 629 SSSIGINGTVGYVAPVII 646
V + AP I
Sbjct: 532 G-----KWPVKWYAPECI 544
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 32.7 bits (73), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 56/138 (40%), Gaps = 20/138 (14%)
Query: 517 AEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLRLCNLSLTQR--------VNI 568
AE N ++ + + ++++I IC + + + +L N L Q + +
Sbjct: 55 AEANVMQQLDNPYIVRMIGICEAESW----MLVMEMAELGPLNKYLQQNRHVKDKNIIEL 110
Query: 569 AIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETA 628
V+ ++YL + + VH DL N+LL + D GL+K L E A+T
Sbjct: 111 VHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 167
Query: 629 SSSIGINGTVGYVAPVII 646
V + AP I
Sbjct: 168 GK-----WPVKWYAPECI 180
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 32.7 bits (73), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 560 LSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617
+++ ++ + VA +E+L +H DL NILL ++ V + D GLA+ +Y
Sbjct: 196 ITMEDLISYSFQVARGMEFLSSR---KCIHRDLAARNILLSENNVVKICDFGLARDIY 250
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 32.7 bits (73), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 56/138 (40%), Gaps = 20/138 (14%)
Query: 517 AEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLRLCNLSLTQR--------VNI 568
AE N ++ + + ++++I IC + + + +L N L Q + +
Sbjct: 67 AEANVMQQLDNPYIVRMIGICEAESW----MLVMEMAELGPLNKYLQQNRHVKDKNIIEL 122
Query: 569 AIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETA 628
V+ ++YL + + VH DL N+LL + D GL+K L E A+T
Sbjct: 123 VHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 179
Query: 629 SSSIGINGTVGYVAPVII 646
V + AP I
Sbjct: 180 GK-----WPVKWYAPECI 192
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 32.7 bits (73), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 74/183 (40%), Gaps = 26/183 (14%)
Query: 482 FSPANKIREGGFNIVY---------NVAMKVANLKQKEASRSFA---AEFNALRNIRHRN 529
FS +I G F VY VA+K + K+++ + E L+ +RH N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 530 LIKI--ITICSSIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSI 587
I+ + + ++ S L + Q V IA A++ L + ++
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNM 136
Query: 588 VHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIA 647
+H D+K NILL + + +GD G +A + + GT ++AP +I
Sbjct: 137 IHRDVKAGNILLSEPGLVKLGDFG------------SASIMAPANXFVGTPYWMAPEVIL 184
Query: 648 ARN 650
A +
Sbjct: 185 AMD 187
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 32.7 bits (73), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 587 IVHGDLKPSNILLDQDVVTHVGDLGLAK-FLYGYEPGTTAETASSSIGINGTVGYVAPVI 645
I H D+KP N+LLD+ + D GLA F Y + GT+ YVAP +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-------GTLPYVAPEL 178
Query: 646 IAARNL 651
+ R
Sbjct: 179 LKRREF 184
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 32.7 bits (73), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 41/205 (20%), Positives = 72/205 (35%), Gaps = 36/205 (17%)
Query: 463 MKQQFPMISHAELSKATNNFSPANKIREGGFNIVY---------NVAMKVANLKQKEASR 513
KQ +P + +++ ++ G F +V+ N A K +
Sbjct: 140 WKQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKE 199
Query: 514 SFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVA 573
+ E + +RH L+ + + ++ +S G+L + +
Sbjct: 200 TVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGEL----FEKVADEHNKMSED 255
Query: 574 FAIEYLRHHC-------QPSIVHGDLKPSNI-----------LLDQDVVTHVGDLGLAKF 615
A+EY+R C + + VH DLKP NI L+D + H+ K
Sbjct: 256 EAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKV 315
Query: 616 LYGYEPGTTAETASSSIGINGTVGY 640
G TAE A+ + VGY
Sbjct: 316 TTG-----TAEFAAPEVAEGKPVGY 335
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 32.7 bits (73), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Query: 560 LSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617
L+L + + VA +E+L +H DL NILL + V + D GLA+ +Y
Sbjct: 141 LTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIY 195
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 32.7 bits (73), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 44/91 (48%), Gaps = 5/91 (5%)
Query: 547 FKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVT- 605
F+ ++N ++ +LT +I + ++ L + I+H D+KP N+++D ++
Sbjct: 107 FEYVNNTDFKVLYPTLTD-YDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKL 165
Query: 606 HVGDLGLAKFLYGYEPGTTAETASSSIGING 636
+ D GLA+F Y PG +S G
Sbjct: 166 RLIDWGLAEF---YHPGKEYNVRVASRYFKG 193
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 32.7 bits (73), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 56/138 (40%), Gaps = 20/138 (14%)
Query: 517 AEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLRLCNLSLTQR--------VNI 568
AE N ++ + + ++++I IC + + + +L N L Q + +
Sbjct: 61 AEANVMQQLDNPYIVRMIGICEAESW----MLVMEMAELGPLNKYLQQNRHVKDKNIIEL 116
Query: 569 AIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETA 628
V+ ++YL + + VH DL N+LL + D GL+K L E A+T
Sbjct: 117 VHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 173
Query: 629 SSSIGINGTVGYVAPVII 646
V + AP I
Sbjct: 174 GK-----WPVKWYAPECI 186
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 32.7 bits (73), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 44/91 (48%), Gaps = 5/91 (5%)
Query: 547 FKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVT- 605
F+ ++N ++ +LT +I + ++ L + I+H D+KP N+++D ++
Sbjct: 107 FEYVNNTDFKVLYPTLTD-YDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKL 165
Query: 606 HVGDLGLAKFLYGYEPGTTAETASSSIGING 636
+ D GLA+F Y PG +S G
Sbjct: 166 RLIDWGLAEF---YHPGKEYNVRVASRYFKG 193
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 32.7 bits (73), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 587 IVHGDLKPSNILLDQDVVTHVGDLGLAK-FLYGYEPGTTAETASSSIGINGTVGYVAPVI 645
I H D+KP N+LLD+ + D GLA F Y + GT+ YVAP +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-------GTLPYVAPEL 178
Query: 646 IAARNL 651
+ R
Sbjct: 179 LKRREF 184
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 32.7 bits (73), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 587 IVHGDLKPSNILLDQDVVTHVGDLGLAK-FLYGYEPGTTAETASSSIGINGTVGYVAPVI 645
I H D+KP N+LLD+ + D GLA F Y + GT+ YVAP +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-------GTLPYVAPEL 178
Query: 646 IAARNL 651
+ R
Sbjct: 179 LKRREF 184
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 32.7 bits (73), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 547 FKAISNGQLRLCNLSLTQRVNIAIDVAFAI-EYLR--HHCQPS-IVHGDLKPSNILLDQD 602
F+ ++N ++ +LT D+ + I E L+ +C I+H D+KP N+++D +
Sbjct: 108 FEYVNNTDFKVLYPTLTD-----YDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 162
Query: 603 VVT-HVGDLGLAKFLYGYEPGTTAETASSSIGING 636
+ + D GLA+F Y PG +S G
Sbjct: 163 LRKLRLIDWGLAEF---YHPGKEYNVRVASRYFKG 194
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 32.7 bits (73), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 587 IVHGDLKPSNILLDQDVVTHVGDLGLAK-FLYGYEPGTTAETASSSIGINGTVGYVAPVI 645
I H D+KP N+LLD+ + D GLA F Y + GT+ YVAP +
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC-------GTLPYVAPEL 178
Query: 646 IAARNL 651
+ R
Sbjct: 179 LKRREF 184
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 32.7 bits (73), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 44/91 (48%), Gaps = 5/91 (5%)
Query: 547 FKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVT- 605
F+ ++N ++ +LT +I + ++ L + I+H D+KP N+++D ++
Sbjct: 107 FEYVNNTDFKVLYPTLTD-YDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKL 165
Query: 606 HVGDLGLAKFLYGYEPGTTAETASSSIGING 636
+ D GLA+F Y PG +S G
Sbjct: 166 RLIDWGLAEF---YHPGKEYNVRVASRYFKG 193
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 32.7 bits (73), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 44/91 (48%), Gaps = 5/91 (5%)
Query: 547 FKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVT- 605
F+ ++N ++ +LT +I + ++ L + I+H D+KP N+++D ++
Sbjct: 108 FEYVNNTDFKVLYPTLTD-YDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKL 166
Query: 606 HVGDLGLAKFLYGYEPGTTAETASSSIGING 636
+ D GLA+F Y PG +S G
Sbjct: 167 RLIDWGLAEF---YHPGKEYNVRVASRYFKG 194
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 32.7 bits (73), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 56/138 (40%), Gaps = 20/138 (14%)
Query: 517 AEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLRLCNLSLTQR--------VNI 568
AE N ++ + + ++++I IC + + + +L N L Q + +
Sbjct: 420 AEANVMQQLDNPYIVRMIGICEAESW----MLVMEMAELGPLNKYLQQNRHVKDKNIIEL 475
Query: 569 AIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETA 628
V+ ++YL + + VH DL N+LL + D GL+K L E A+T
Sbjct: 476 VHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 532
Query: 629 SSSIGINGTVGYVAPVII 646
V + AP I
Sbjct: 533 G-----KWPVKWYAPECI 545
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 32.7 bits (73), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 547 FKAISNGQLRLCNLSLTQRVNIAIDVAFAI-EYLR--HHCQPS-IVHGDLKPSNILLDQD 602
F+ ++N ++ +LT D+ + I E L+ +C I+H D+KP N+++D +
Sbjct: 107 FEYVNNTDFKVLYPTLTD-----YDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHE 161
Query: 603 VVT-HVGDLGLAKFLYGYEPGTTAETASSSIGING 636
+ + D GLA+F Y PG +S G
Sbjct: 162 LRKLRLIDWGLAEF---YHPGKEYNVRVASRYFKG 193
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 32.7 bits (73), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 587 IVHGDLKPSNILLDQD-VVTHVGDLGLAKFLYGYEP 621
I H D+KP N+LLD D V + D G AK L EP
Sbjct: 177 ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 212
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 32.7 bits (73), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 44/91 (48%), Gaps = 5/91 (5%)
Query: 547 FKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVT- 605
F+ ++N ++ +LT +I + ++ L + I+H D+KP N+++D ++
Sbjct: 109 FEYVNNTDFKVLYPTLTD-YDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKL 167
Query: 606 HVGDLGLAKFLYGYEPGTTAETASSSIGING 636
+ D GLA+F Y PG +S G
Sbjct: 168 RLIDWGLAEF---YHPGKEYNVRVASRYFKG 195
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 32.7 bits (73), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 56/138 (40%), Gaps = 20/138 (14%)
Query: 517 AEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLRLCNLSLTQR--------VNI 568
AE N ++ + + ++++I IC + + + +L N L Q + +
Sbjct: 57 AEANVMQQLDNPYIVRMIGICEAESW----MLVMEMAELGPLNKYLQQNRHVKDKNIIEL 112
Query: 569 AIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETA 628
V+ ++YL + + VH DL N+LL + D GL+K L E A+T
Sbjct: 113 VHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 169
Query: 629 SSSIGINGTVGYVAPVII 646
V + AP I
Sbjct: 170 GK-----WPVKWYAPECI 182
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 32.7 bits (73), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 78/195 (40%), Gaps = 32/195 (16%)
Query: 473 AELSKATNNFSPANKIREGGFNIVY---------NVAMKV---ANLKQKEASRSFAAEFN 520
A+ A +F + +G F VY +A+KV A L++ E
Sbjct: 1 AKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 521 ALRNIRHRNLIKIITICSSID--FEGFDFKAISNGQLRLCNLSL--TQRVNIAI-DVAFA 575
++RH N++++ + ++ + L LS QR I ++A A
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 120
Query: 576 IEYLRHHCQPS-IVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGI 634
+ Y C ++H D+KP N+LL G+L +A F + + +S +
Sbjct: 121 LSY----CHSKRVIHRDIKPENLLLGS-----AGELKIADFGW-----SVHAPSSRRAAL 166
Query: 635 NGTVGYVAPVIIAAR 649
GT+ Y+ P +I R
Sbjct: 167 CGTLDYLPPEMIEGR 181
>pdb|2R9U|A Chain A, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|B Chain B, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|C Chain C, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|D Chain D, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
Length = 174
Score = 32.7 bits (73), Expect = 0.81, Method: Composition-based stats.
Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Query: 204 ANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNI 263
A + + +++ + +N+I+ P +LVNL L S++L + + L L++
Sbjct: 29 AGIPTDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDL 88
Query: 264 GGNHLQGSILSSLGNLTLQT--YLFNN 288
NHL+ + NL T YL+NN
Sbjct: 89 NDNHLKSIPRGAFDNLKSLTHIYLYNN 115
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 32.7 bits (73), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 59/139 (42%), Gaps = 15/139 (10%)
Query: 517 AEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAF-- 574
E AL+N+RH+++ ++ + + + + G+L +S + V F
Sbjct: 57 TEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQ 116
Query: 575 ---AIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSS 631
A+ Y+ H Q H DLKP N+L D+ + D GL +P + +
Sbjct: 117 IVSAVAYV--HSQ-GYAHRDLKPENLLFDEYHKLKLIDFGLCA-----KPKGNKDYHLQT 168
Query: 632 IGINGTVGYVAPVIIAARN 650
G++ Y AP +I ++
Sbjct: 169 CC--GSLAYAAPELIQGKS 185
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 32.7 bits (73), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 41/205 (20%), Positives = 72/205 (35%), Gaps = 36/205 (17%)
Query: 463 MKQQFPMISHAELSKATNNFSPANKIREGGFNIVY---------NVAMKVANLKQKEASR 513
KQ +P + +++ ++ G F +V+ N A K +
Sbjct: 34 WKQYYPQPVEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKE 93
Query: 514 SFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVA 573
+ E + +RH L+ + + ++ +S G+L + +
Sbjct: 94 TVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGEL----FEKVADEHNKMSED 149
Query: 574 FAIEYLRHHC-------QPSIVHGDLKPSNI-----------LLDQDVVTHVGDLGLAKF 615
A+EY+R C + + VH DLKP NI L+D + H+ K
Sbjct: 150 EAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKV 209
Query: 616 LYGYEPGTTAETASSSIGINGTVGY 640
G TAE A+ + VGY
Sbjct: 210 TTG-----TAEFAAPEVAEGKPVGY 229
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 32.7 bits (73), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 39/94 (41%), Gaps = 11/94 (11%)
Query: 533 IITICSSIDFEGF--------DFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQ 584
I + CS D F D + + + L V++ +A +EYL H
Sbjct: 107 IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH-- 164
Query: 585 PSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618
+VH DL N+L+ + + DLGL + +Y
Sbjct: 165 -HVVHKDLATRNVLVYDKLNVKISDLGLFREVYA 197
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 32.7 bits (73), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 587 IVHGDLKPSNILLDQD-VVTHVGDLGLAKFLYGYEP 621
I H D+KP N+LLD D V + D G AK L EP
Sbjct: 177 ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 212
>pdb|3RFS|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
pdb|3RFS|B Chain B, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 272
Score = 32.7 bits (73), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 58/124 (46%), Gaps = 12/124 (9%)
Query: 127 NASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLE 186
N L ++E GV F +L NL++LNL N L S D LTN ++L+
Sbjct: 110 NLKELVLVENQLQSLPDGV---FDKLTNLTYLNLAHNQLQSLPKGVFD---KLTNLTELD 163
Query: 187 RLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRN-LVNLNWLTMESSQLI 245
Y N + LP + + + +K + + N++ S +P G+ + L +L ++ + +
Sbjct: 164 LSY---NQLQS-LPEGVFDKLTQLKDLRLYQNQLKS-VPDGVFDRLTSLQYIWLHDNPWD 218
Query: 246 GTIP 249
T P
Sbjct: 219 CTCP 222
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 53/120 (44%), Gaps = 6/120 (5%)
Query: 210 IKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQ 269
++ +A+G N++ ++ L NL +L + +QL + + NL+ L + N LQ
Sbjct: 65 VRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQ 122
Query: 270 G---SILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTT 326
+ L NLT N LQ +L L +S+N+L S LP+ + T
Sbjct: 123 SLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQS-LPEGVFDKLT 181
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 32.7 bits (73), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 44/91 (48%), Gaps = 5/91 (5%)
Query: 547 FKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVT- 605
F+ ++N ++ +LT +I + ++ L + I+H D+KP N+++D ++
Sbjct: 107 FEYVNNTDFKVLYPTLTD-YDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKL 165
Query: 606 HVGDLGLAKFLYGYEPGTTAETASSSIGING 636
+ D GLA+F Y PG +S G
Sbjct: 166 RLIDWGLAEF---YHPGKEYNVRVASRYFKG 193
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 32.7 bits (73), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 587 IVHGDLKPSNILLDQD-VVTHVGDLGLAKFLYGYEP 621
I H D+KP N+LLD D V + D G AK L EP
Sbjct: 171 ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 206
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 32.7 bits (73), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 50/118 (42%), Gaps = 5/118 (4%)
Query: 502 KVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLR--LCN 559
K++ + + + E L RH N+I I I + E I + L
Sbjct: 75 KISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK 134
Query: 560 LSLTQRVNIAIDVAFAIEYLR---HHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
L TQ ++ F + LR + +++H DLKPSN+LL+ + D GLA+
Sbjct: 135 LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR 192
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 32.7 bits (73), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 11/76 (14%)
Query: 571 DVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASS 630
++ A+EYL H + +V+ D+K N++LD+D + D GL K G G T +
Sbjct: 113 EIVSALEYL--HSR-DVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKX--- 164
Query: 631 SIGINGTVGYVAPVII 646
GT Y+AP ++
Sbjct: 165 ---FCGTPEYLAPEVL 177
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 32.3 bits (72), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 50/118 (42%), Gaps = 5/118 (4%)
Query: 502 KVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLR--LCN 559
K++ + + + E L RH N+I I I + E I + L
Sbjct: 55 KISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK 114
Query: 560 LSLTQRVNIAIDVAFAIEYLR---HHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
L TQ ++ F + LR + +++H DLKPSN+LL+ + D GLA+
Sbjct: 115 LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLAR 172
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 32.3 bits (72), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 10/64 (15%)
Query: 587 IVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAE-TASSSIGINGTVGYVAPVI 645
++H DLK N+ L+ D+ +GD GLA T E + GT Y+AP +
Sbjct: 163 VIHRDLKLGNLFLNDDMDVKIGDFGLA---------TKIEFDGERKKXLCGTPNYIAPEV 213
Query: 646 IAAR 649
+ +
Sbjct: 214 LCKK 217
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 32.3 bits (72), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 44/91 (48%), Gaps = 5/91 (5%)
Query: 547 FKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVT- 605
F+ ++N ++ +LT +I + ++ L + I+H D+KP N+++D ++
Sbjct: 107 FEYVNNTDFKVLYPTLTD-YDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKL 165
Query: 606 HVGDLGLAKFLYGYEPGTTAETASSSIGING 636
+ D GLA+F Y PG +S G
Sbjct: 166 RLIDWGLAEF---YHPGKEYNVRVASRYFKG 193
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 32.3 bits (72), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 10/63 (15%)
Query: 587 IVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVII 646
++H D+KP N+LL G+L +A F + + +S + GT+ Y+ P +I
Sbjct: 132 VIHRDIKPENLLLGS-----AGELKIADFGW-----SVHAPSSRRAALCGTLDYLPPEMI 181
Query: 647 AAR 649
R
Sbjct: 182 EGR 184
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 32.3 bits (72), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 44/91 (48%), Gaps = 5/91 (5%)
Query: 547 FKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVT- 605
F+ ++N ++ +LT +I + ++ L + I+H D+KP N+++D ++
Sbjct: 128 FEYVNNTDFKVLYPTLTD-YDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKL 186
Query: 606 HVGDLGLAKFLYGYEPGTTAETASSSIGING 636
+ D GLA+F Y PG +S G
Sbjct: 187 RLIDWGLAEF---YHPGKEYNVRVASRYFKG 214
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 32.3 bits (72), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 587 IVHGDLKPSNILLDQD-VVTHVGDLGLAKFLYGYEP 621
I H D+KP N+LLD D V + D G AK L EP
Sbjct: 179 ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 214
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 32.3 bits (72), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 11/76 (14%)
Query: 571 DVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASS 630
++ A+EYL H + +V+ D+K N++LD+D + D GL K G G T +
Sbjct: 113 EIVSALEYL--HSR-DVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKX--- 164
Query: 631 SIGINGTVGYVAPVII 646
GT Y+AP ++
Sbjct: 165 ---FCGTPEYLAPEVL 177
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 32.3 bits (72), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 587 IVHGDLKPSNILLDQD-VVTHVGDLGLAKFLYGYEP 621
I H D+KP N+LLD D V + D G AK L EP
Sbjct: 181 ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 216
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 32.3 bits (72), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 50/118 (42%), Gaps = 5/118 (4%)
Query: 502 KVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLR--LCN 559
K++ + + + E L RH N+I I I + E I + L
Sbjct: 59 KISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK 118
Query: 560 LSLTQRVNIAIDVAFAIEYLR---HHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
L TQ ++ F + LR + +++H DLKPSN+LL+ + D GLA+
Sbjct: 119 LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR 176
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 32.3 bits (72), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 587 IVHGDLKPSNILLDQD-VVTHVGDLGLAKFLYGYEP 621
I H D+KP N+LLD D V + D G AK L EP
Sbjct: 222 ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 257
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 32.3 bits (72), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 50/118 (42%), Gaps = 5/118 (4%)
Query: 502 KVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLR--LCN 559
K++ + + + E L RH N+I I I + E I + L
Sbjct: 55 KISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK 114
Query: 560 LSLTQRVNIAIDVAFAIEYLR---HHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
L TQ ++ F + LR + +++H DLKPSN+LL+ + D GLA+
Sbjct: 115 LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR 172
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 32.3 bits (72), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 50/118 (42%), Gaps = 5/118 (4%)
Query: 502 KVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLR--LCN 559
K++ + + + E L RH N+I I I + E I + L
Sbjct: 60 KISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK 119
Query: 560 LSLTQRVNIAIDVAFAIEYLR---HHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
L TQ ++ F + LR + +++H DLKPSN+LL+ + D GLA+
Sbjct: 120 LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR 177
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 32.3 bits (72), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 50/118 (42%), Gaps = 5/118 (4%)
Query: 502 KVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLR--LCN 559
K++ + + + E L RH N+I I I + E I + L
Sbjct: 61 KISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK 120
Query: 560 LSLTQRVNIAIDVAFAIEYLR---HHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
L TQ ++ F + LR + +++H DLKPSN+LL+ + D GLA+
Sbjct: 121 LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR 178
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 32.3 bits (72), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 50/118 (42%), Gaps = 5/118 (4%)
Query: 502 KVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLR--LCN 559
K++ + + + E L RH N+I I I + E I + L
Sbjct: 52 KISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK 111
Query: 560 LSLTQRVNIAIDVAFAIEYLR---HHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
L TQ ++ F + LR + +++H DLKPSN+LL+ + D GLA+
Sbjct: 112 LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR 169
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 32.3 bits (72), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 50/118 (42%), Gaps = 5/118 (4%)
Query: 502 KVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLR--LCN 559
K++ + + + E L RH N+I I I + E I + L
Sbjct: 59 KISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK 118
Query: 560 LSLTQRVNIAIDVAFAIEYLR---HHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
L TQ ++ F + LR + +++H DLKPSN+LL+ + D GLA+
Sbjct: 119 LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR 176
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 32.3 bits (72), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 56/138 (40%), Gaps = 20/138 (14%)
Query: 517 AEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLRLCNLSLTQR--------VNI 568
AE N ++ + + ++++I IC + + + +L N L Q + +
Sbjct: 77 AEANVMQQLDNPYIVRMIGICEAESW----MLVMEMAELGPLNKYLQQNRHVKDKNIIEL 132
Query: 569 AIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETA 628
V+ ++YL + + VH DL N+LL + D GL+K L E A+T
Sbjct: 133 VHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 189
Query: 629 SSSIGINGTVGYVAPVII 646
V + AP I
Sbjct: 190 GK-----WPVKWYAPECI 202
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 32.3 bits (72), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 56/138 (40%), Gaps = 20/138 (14%)
Query: 517 AEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLRLCNLSLTQR--------VNI 568
AE N ++ + + ++++I IC + + + +L N L Q + +
Sbjct: 77 AEANVMQQLDNPYIVRMIGICEAESW----MLVMEMAELGPLNKYLQQNRHVKDKNIIEL 132
Query: 569 AIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETA 628
V+ ++YL + + VH DL N+LL + D GL+K L E A+T
Sbjct: 133 VHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 189
Query: 629 SSSIGINGTVGYVAPVII 646
V + AP I
Sbjct: 190 GK-----WPVKWYAPECI 202
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 32.3 bits (72), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 50/118 (42%), Gaps = 5/118 (4%)
Query: 502 KVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLR--LCN 559
K++ + + + E L RH N+I I I + E I + L
Sbjct: 53 KISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK 112
Query: 560 LSLTQRVNIAIDVAFAIEYLR---HHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
L TQ ++ F + LR + +++H DLKPSN+LL+ + D GLA+
Sbjct: 113 LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR 170
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 32.3 bits (72), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 50/118 (42%), Gaps = 5/118 (4%)
Query: 502 KVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLR--LCN 559
K++ + + + E L RH N+I I I + E I + L
Sbjct: 57 KISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK 116
Query: 560 LSLTQRVNIAIDVAFAIEYLR---HHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
L TQ ++ F + LR + +++H DLKPSN+LL+ + D GLA+
Sbjct: 117 LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR 174
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 32.3 bits (72), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 10/63 (15%)
Query: 587 IVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVII 646
++H D+KP N+LL G+L +A F + + +S + GT+ Y+ P +I
Sbjct: 129 VIHRDIKPENLLLGS-----AGELKIADFGW-----SVHAPSSRRTDLCGTLDYLPPEMI 178
Query: 647 AAR 649
R
Sbjct: 179 EGR 181
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 32.3 bits (72), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 11/77 (14%)
Query: 567 NIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAE 626
+ + + A+ YL+ + ++H D+KPSNILLD+ + D G++ L A+
Sbjct: 128 KMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLV----DDKAK 181
Query: 627 TASSSIGINGTVGYVAP 643
S+ G Y+AP
Sbjct: 182 DRSA-----GCAAYMAP 193
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 32.3 bits (72), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 11/76 (14%)
Query: 571 DVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASS 630
++ A+EYL H + +V+ D+K N++LD+D + D GL K G G T +
Sbjct: 113 EIVSALEYL--HSR-DVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKX--- 164
Query: 631 SIGINGTVGYVAPVII 646
GT Y+AP ++
Sbjct: 165 ---FCGTPEYLAPEVL 177
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 32.3 bits (72), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 587 IVHGDLKPSNILLDQD-VVTHVGDLGLAKFLYGYEP 621
I H D+KP N+LLD D V + D G AK L EP
Sbjct: 155 ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 190
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 32.3 bits (72), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 10/63 (15%)
Query: 587 IVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVII 646
++H D+KP N+LL G+L +A F + ++ T + GT+ Y+ P +I
Sbjct: 132 VIHRDIKPENLLLGS-----AGELKIADFGWSVHAPSSRRTT-----LCGTLDYLPPEMI 181
Query: 647 AAR 649
R
Sbjct: 182 EGR 184
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 32.3 bits (72), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 50/118 (42%), Gaps = 5/118 (4%)
Query: 502 KVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLR--LCN 559
K++ + + + E L RH N+I I I + E I + L
Sbjct: 59 KISPFEHQTYXQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK 118
Query: 560 LSLTQRVNIAIDVAFAIEYLR---HHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
L TQ ++ F + LR + +++H DLKPSN+LL+ + D GLA+
Sbjct: 119 LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLAR 176
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 32.3 bits (72), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 50/118 (42%), Gaps = 5/118 (4%)
Query: 502 KVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLR--LCN 559
K++ + + + E L RH N+I I I + E I + L
Sbjct: 63 KISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK 122
Query: 560 LSLTQRVNIAIDVAFAIEYLR---HHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
L TQ ++ F + LR + +++H DLKPSN+LL+ + D GLA+
Sbjct: 123 LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR 180
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 32.3 bits (72), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 50/118 (42%), Gaps = 5/118 (4%)
Query: 502 KVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLR--LCN 559
K++ + + + E L RH N+I I I + E I + L
Sbjct: 55 KISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK 114
Query: 560 LSLTQRVNIAIDVAFAIEYLR---HHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
L TQ ++ F + LR + +++H DLKPSN+LL+ + D GLA+
Sbjct: 115 LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR 172
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 32.3 bits (72), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 587 IVHGDLKPSNILLDQD-VVTHVGDLGLAKFLYGYEP 621
I H D+KP N+LLD D V + D G AK L EP
Sbjct: 148 ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 183
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 32.3 bits (72), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 58/129 (44%), Gaps = 13/129 (10%)
Query: 494 NIVYNVAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSS----IDFEGFDFKA 549
N+ K L KE F +E ++N+ H +++K+I I I E + +
Sbjct: 54 NVAVKTCKKDCTLDNKE---KFMSEAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYPYGE 110
Query: 550 ISNGQLRLCN-LSLTQRVNIAIDVAFAIEYLRH-HCQPSIVHGDLKPSNILLDQDVVTHV 607
+ + R N L + V ++ + A+ YL +C VH D+ NIL+ +
Sbjct: 111 LGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINC----VHRDIAVRNILVASPECVKL 166
Query: 608 GDLGLAKFL 616
GD GL++++
Sbjct: 167 GDFGLSRYI 175
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 32.3 bits (72), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 10/63 (15%)
Query: 587 IVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVII 646
++H D+KP N+LL G+L +A F + + +S + GT+ Y+ P +I
Sbjct: 134 VIHRDIKPENLLLGS-----AGELKIADFGW-----SVHAPSSRRTDLCGTLDYLPPEMI 183
Query: 647 AAR 649
R
Sbjct: 184 EGR 186
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 32.3 bits (72), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 20/28 (71%)
Query: 587 IVHGDLKPSNILLDQDVVTHVGDLGLAK 614
++H D+KPSNILL+ + V D GL++
Sbjct: 130 LLHRDMKPSNILLNAECHVKVADFGLSR 157
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 32.3 bits (72), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 11/76 (14%)
Query: 571 DVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASS 630
++ A+EYL H + +V+ D+K N++LD+D + D GL K G G T +
Sbjct: 118 EIVSALEYL--HSR-DVVYRDIKLENLMLDKDGHIKITDFGLCK--EGISDGATMKX--- 169
Query: 631 SIGINGTVGYVAPVII 646
GT Y+AP ++
Sbjct: 170 ---FCGTPEYLAPEVL 182
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 32.3 bits (72), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 10/63 (15%)
Query: 587 IVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVII 646
++H D+KP N+LL G+L +A F + + +S + GT+ Y+ P +I
Sbjct: 130 VIHRDIKPENLLLGS-----AGELKIADFGW-----SVHAPSSRRTDLCGTLDYLPPEMI 179
Query: 647 AAR 649
R
Sbjct: 180 EGR 182
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 32.3 bits (72), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 39/94 (41%), Gaps = 11/94 (11%)
Query: 533 IITICSSIDFEGF--------DFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQ 584
I + CS D F D + + + L V++ +A +EYL H
Sbjct: 90 IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH-- 147
Query: 585 PSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618
+VH DL N+L+ + + DLGL + +Y
Sbjct: 148 -HVVHKDLATRNVLVYDKLNVKISDLGLFREVYA 180
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Query: 584 QPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAP 643
Q VH D+KP N+LLD + + D G L + GT SS+ + GT Y++P
Sbjct: 209 QLHYVHRDIKPDNVLLDVNGHIRLADFGSC--LKMNDDGTV----QSSVAV-GTPDYISP 261
Query: 644 VIIAA 648
I+ A
Sbjct: 262 EILQA 266
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 50/118 (42%), Gaps = 5/118 (4%)
Query: 502 KVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLR--LCN 559
K++ + + + E L RH N+I I I + E I + L
Sbjct: 59 KISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK 118
Query: 560 LSLTQRVNIAIDVAFAIEYLR---HHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
L TQ ++ F + LR + +++H DLKPSN+LL+ + D GLA+
Sbjct: 119 LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLAR 176
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 587 IVHGDLKPSNILLDQD-VVTHVGDLGLAKFLYGYEP 621
I H D+KP N+LLD D V + D G AK L EP
Sbjct: 155 ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 190
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 11/82 (13%)
Query: 566 VNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTA 625
V A ++A + +L+ I++ DLK N++LD + + D G+ K
Sbjct: 445 VFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCK--------ENI 493
Query: 626 ETASSSIGINGTVGYVAPVIIA 647
++ GT Y+AP IIA
Sbjct: 494 WDGVTTKXFCGTPDYIAPEIIA 515
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 50/118 (42%), Gaps = 5/118 (4%)
Query: 502 KVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLR--LCN 559
K++ + + + E L RH N+I I I + E I + L
Sbjct: 53 KISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK 112
Query: 560 LSLTQRVNIAIDVAFAIEYLR---HHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
L TQ ++ F + LR + +++H DLKPSN+LL+ + D GLA+
Sbjct: 113 LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR 170
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 50/118 (42%), Gaps = 5/118 (4%)
Query: 502 KVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLR--LCN 559
K++ + + + E L RH N+I I I + E I + L
Sbjct: 59 KISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK 118
Query: 560 LSLTQRVNIAIDVAFAIEYLR---HHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
L TQ ++ F + LR + +++H DLKPSN+LL+ + D GLA+
Sbjct: 119 LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR 176
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 10/63 (15%)
Query: 587 IVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVII 646
++H D+KP N+LL G+L +A F + ++ T + GT+ Y+ P +I
Sbjct: 134 VIHRDIKPENLLLGS-----AGELKIADFGWSVHAPSSRRTT-----LCGTLDYLPPEMI 183
Query: 647 AAR 649
R
Sbjct: 184 EGR 186
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 50/118 (42%), Gaps = 5/118 (4%)
Query: 502 KVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLR--LCN 559
K++ + + + E L RH N+I I I + E I + L
Sbjct: 60 KISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK 119
Query: 560 LSLTQRVNIAIDVAFAIEYLR---HHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
L TQ ++ F + LR + +++H DLKPSN+LL+ + D GLA+
Sbjct: 120 LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR 177
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Query: 560 LSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617
L+L + + VA +E+L +H DL NILL + V + D GLA+ +Y
Sbjct: 136 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIY 190
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 33/65 (50%), Gaps = 7/65 (10%)
Query: 584 QPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAP 643
Q VH D+KP N+LLD + + D G L + GT SS+ + GT Y++P
Sbjct: 193 QLHYVHRDIKPDNVLLDVNGHIRLADFGSC--LKMNDDGTV----QSSVAV-GTPDYISP 245
Query: 644 VIIAA 648
I+ A
Sbjct: 246 EILQA 250
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 50/118 (42%), Gaps = 5/118 (4%)
Query: 502 KVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLR--LCN 559
K++ + + + E L RH N+I I I + E I + L
Sbjct: 55 KISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK 114
Query: 560 LSLTQRVNIAIDVAFAIEYLR---HHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
L TQ ++ F + LR + +++H DLKPSN+LL+ + D GLA+
Sbjct: 115 LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLAR 172
>pdb|3RFJ|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 279
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 11/102 (10%)
Query: 127 NASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLE 186
N L ++E GV F +L NL++L L N L S D LTN L
Sbjct: 110 NLKELVLVENQLQSLPDGV---FDKLTNLTYLYLYHNQLQSLPKGVFDK---LTN---LT 160
Query: 187 RLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGI 228
RL + N + LP + + + +KQ+++ N++ S +P G+
Sbjct: 161 RLDLDNNQLQS-LPEGVFDKLTQLKQLSLNDNQLKS-VPDGV 200
Score = 30.0 bits (66), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 59/121 (48%), Gaps = 8/121 (6%)
Query: 210 IKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQ 269
++ +A+G N++ ++ L NL +L + +QL + + NL+ L + N LQ
Sbjct: 65 VRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQ 122
Query: 270 G---SILSSLGNLTLQTYLFNNLQGNIPSSLAN-CKSLLGLSVSHNKLTSTLPQQILSVT 325
+ L NLT YL++N ++P + + +L L + +N+L S LP+ +
Sbjct: 123 SLPDGVFDKLTNLTY-LYLYHNQLQSLPKGVFDKLTNLTRLDLDNNQLQS-LPEGVFDKL 180
Query: 326 T 326
T
Sbjct: 181 T 181
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 587 IVHGDLKPSNILLDQD-VVTHVGDLGLAKFLYGYEP 621
I H D+KP N+LLD D V + D G AK L EP
Sbjct: 151 ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 186
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 12/64 (18%)
Query: 587 IVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG-YEPGTTAETASSSIGINGTVGYVAPVI 645
++H D+KP N+LL G+L +A F + + P + +T + GT+ Y+ P +
Sbjct: 130 VIHRDIKPENLLLGS-----AGELKIADFGWSVHAPSSRRDT------LCGTLDYLPPEM 178
Query: 646 IAAR 649
I R
Sbjct: 179 IEGR 182
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 587 IVHGDLKPSNILLDQD-VVTHVGDLGLAKFLYGYEP 621
I H D+KP N+LLD D V + D G AK L EP
Sbjct: 162 ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 197
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 587 IVHGDLKPSNILLDQD-VVTHVGDLGLAKFLYGYEP 621
I H D+KP N+LLD D V + D G AK L EP
Sbjct: 156 ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 191
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 50/118 (42%), Gaps = 5/118 (4%)
Query: 502 KVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLR--LCN 559
K++ + + + E L RH N+I I I + E I + L
Sbjct: 55 KISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK 114
Query: 560 LSLTQRVNIAIDVAFAIEYLR---HHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
L TQ ++ F + LR + +++H DLKPSN+LL+ + D GLA+
Sbjct: 115 LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLAR 172
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 587 IVHGDLKPSNILLDQD-VVTHVGDLGLAKFLYGYEP 621
I H D+KP N+LLD D V + D G AK L EP
Sbjct: 144 ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 179
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 587 IVHGDLKPSNILLDQD-VVTHVGDLGLAKFLYGYEP 621
I H D+KP N+LLD D V + D G AK L EP
Sbjct: 143 ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 178
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 587 IVHGDLKPSNILLDQD-VVTHVGDLGLAKFLYGYEP 621
I H D+KP N+LLD D V + D G AK L EP
Sbjct: 143 ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 178
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 10/63 (15%)
Query: 587 IVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVII 646
++H D+KP N+LL G+L +A F + ++ T + GT+ Y+ P +I
Sbjct: 131 VIHRDIKPENLLLGS-----AGELKIANFGWSVHAPSSRRTT-----LCGTLDYLPPEMI 180
Query: 647 AAR 649
R
Sbjct: 181 EGR 183
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Query: 560 LSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617
L+L + + VA +E+L +H DL NILL + V + D GLA+ +Y
Sbjct: 136 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIY 190
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 587 IVHGDLKPSNILLDQD-VVTHVGDLGLAKFLYGYEP 621
I H D+KP N+LLD D V + D G AK L EP
Sbjct: 143 ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 178
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 10/63 (15%)
Query: 587 IVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVII 646
++H D+KP N+LL G+L +A F + + +S + GT+ Y+ P +I
Sbjct: 129 VIHRDIKPENLLLGS-----AGELKIADFGW-----SVHAPSSRRTDLCGTLDYLPPEMI 178
Query: 647 AAR 649
R
Sbjct: 179 EGR 181
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 76/190 (40%), Gaps = 32/190 (16%)
Query: 478 ATNNFSPANKIREGGFNIVY---------NVAMKV---ANLKQKEASRSFAAEFNALRNI 525
A +F + +G F VY +A+KV A L++ E ++
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 526 RHRNLIKIITICSSID--FEGFDFKAISNGQLRLCNLSL--TQRVNIAI-DVAFAIEYLR 580
RH N++++ + ++ + L LS QR I ++A A+ Y
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY-- 122
Query: 581 HHCQPS-IVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVG 639
C ++H D+KP N+LL G+L +A F + ++ T + GT+
Sbjct: 123 --CHSKRVIHRDIKPENLLLGS-----AGELKIADFGWSVHAPSSRRTT-----LCGTLD 170
Query: 640 YVAPVIIAAR 649
Y+ P +I R
Sbjct: 171 YLPPEMIEGR 180
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 587 IVHGDLKPSNILLDQD-VVTHVGDLGLAKFLYGYEP 621
I H D+KP N+LLD D V + D G AK L EP
Sbjct: 147 ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 182
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 587 IVHGDLKPSNILLDQD-VVTHVGDLGLAKFLYGYEP 621
I H D+KP N+LLD D V + D G AK L EP
Sbjct: 143 ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 178
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 587 IVHGDLKPSNILLDQD-VVTHVGDLGLAKFLYGYEP 621
I H D+KP N+LLD D V + D G AK L EP
Sbjct: 143 ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 178
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 587 IVHGDLKPSNILLDQD-VVTHVGDLGLAKFLYGYEP 621
I H D+KP N+LLD D V + D G AK L EP
Sbjct: 143 ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 178
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 57/128 (44%), Gaps = 11/128 (8%)
Query: 494 NIVYNVAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSS----IDFEGFDFKA 549
N+ K L KE F +E ++N+ H +++K+I I I E + +
Sbjct: 42 NVAVKTCKKDCTLDNKE---KFMSEAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYPYGE 98
Query: 550 ISNGQLRLCN-LSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVG 608
+ + R N L + V ++ + A+ YL + VH D+ NIL+ +G
Sbjct: 99 LGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLG 155
Query: 609 DLGLAKFL 616
D GL++++
Sbjct: 156 DFGLSRYI 163
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 10/63 (15%)
Query: 587 IVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVII 646
++H D+KP N+LL G+L +A F + ++ T + GT+ Y+ P +I
Sbjct: 129 VIHRDIKPENLLLGS-----AGELKIADFGWSVHAPSSRRTT-----LCGTLDYLPPEMI 178
Query: 647 AAR 649
R
Sbjct: 179 EGR 181
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Query: 560 LSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617
L+L + + VA +E+L +H DL NILL + V + D GLA+ +Y
Sbjct: 188 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIY 242
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Query: 587 IVHGDLKPSNILLDQD-VVTHVGDLGLAKFLYGYEP 621
I H D+KP N+LLD D V + D G AK L EP
Sbjct: 143 ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEP 178
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 10/63 (15%)
Query: 587 IVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVII 646
++H D+KP N+LL G+L +A F + ++ T + GT+ Y+ P +I
Sbjct: 129 VIHRDIKPENLLLGS-----AGELKIADFGWSVHAPSSRRTE-----LCGTLDYLPPEMI 178
Query: 647 AAR 649
R
Sbjct: 179 EGR 181
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 39/190 (20%), Positives = 72/190 (37%), Gaps = 32/190 (16%)
Query: 478 ATNNFSPANKIREGGFNIVY---------NVAMKV---ANLKQKEASRSFAAEFNALRNI 525
A +F + +G F VY +A+KV A L++ E ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 526 RHRNLIKIITICSS-----IDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLR 580
RH N++++ + E + +L + ++A A+ Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY-- 123
Query: 581 HHCQPS-IVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVG 639
C ++H D+KP N+LL G+L +A F + + +S + GT+
Sbjct: 124 --CHSKRVIHRDIKPENLLLGS-----AGELKIADFGW-----SVHAPSSRRTXLCGTLD 171
Query: 640 YVAPVIIAAR 649
Y+ P +I R
Sbjct: 172 YLPPEMIEGR 181
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Query: 560 LSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617
L+L + + VA +E+L +H DL NILL + V + D GLA+ +Y
Sbjct: 190 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIY 244
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 11/84 (13%)
Query: 566 VNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTA 625
V A ++A + +L+ I++ DLK N++LD + + D G+ K
Sbjct: 124 VFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCK--------ENI 172
Query: 626 ETASSSIGINGTVGYVAPVIIAAR 649
++ GT Y+AP IIA +
Sbjct: 173 WDGVTTKXFCGTPDYIAPEIIAYQ 196
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 76/190 (40%), Gaps = 32/190 (16%)
Query: 478 ATNNFSPANKIREGGFNIVY---------NVAMKV---ANLKQKEASRSFAAEFNALRNI 525
A +F + +G F VY +A+KV A L++ E ++
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 526 RHRNLIKIITICSSID--FEGFDFKAISNGQLRLCNLSL--TQRVNIAI-DVAFAIEYLR 580
RH N++++ + ++ + L LS QR I ++A A+ Y
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY-- 127
Query: 581 HHCQPS-IVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVG 639
C ++H D+KP N+LL G+L +A F + ++ T + GT+
Sbjct: 128 --CHSKRVIHRDIKPENLLLGS-----AGELKIADFGWSVHAPSSRRTT-----LCGTLD 175
Query: 640 YVAPVIIAAR 649
Y+ P +I R
Sbjct: 176 YLPPEMIEGR 185
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 10/63 (15%)
Query: 587 IVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVII 646
++H D+KP N+LL G+L +A F + + +S + GT+ Y+ P +I
Sbjct: 131 VIHRDIKPENLLLGS-----AGELKIADFGW-----SVHAPSSRRXXLCGTLDYLPPEMI 180
Query: 647 AAR 649
R
Sbjct: 181 EGR 183
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Query: 560 LSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617
L+L + + VA +E+L +H DL NILL + V + D GLA+ +Y
Sbjct: 182 LTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIY 236
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Query: 560 LSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617
L+L + + VA +E+L +H DL NILL + V + D GLA+ +Y
Sbjct: 147 LTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIY 201
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 76/190 (40%), Gaps = 32/190 (16%)
Query: 478 ATNNFSPANKIREGGFNIVY---------NVAMKV---ANLKQKEASRSFAAEFNALRNI 525
A +F + +G F VY +A+KV A L++ E ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 526 RHRNLIKIITICSSID--FEGFDFKAISNGQLRLCNLSL--TQRVNIAI-DVAFAIEYLR 580
RH N++++ + ++ + L LS QR I ++A A+ Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY-- 126
Query: 581 HHCQPS-IVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVG 639
C ++H D+KP N+LL G+L +A F + ++ T + GT+
Sbjct: 127 --CHSKRVIHRDIKPENLLLGS-----AGELKIADFGWSVHAPSSRRTT-----LCGTLD 174
Query: 640 YVAPVIIAAR 649
Y+ P +I R
Sbjct: 175 YLPPEMIEGR 184
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Query: 560 LSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617
L+L + + VA +E+L +H DL NILL + V + D GLA+ +Y
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIY 199
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Query: 560 LSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617
L+L + + VA +E+L +H DL NILL + V + D GLA+ +Y
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIY 199
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 39/190 (20%), Positives = 72/190 (37%), Gaps = 32/190 (16%)
Query: 478 ATNNFSPANKIREGGFNIVY---------NVAMKV---ANLKQKEASRSFAAEFNALRNI 525
A +F + +G F VY +A+KV A L++ E ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 526 RHRNLIKIITICSS-----IDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLR 580
RH N++++ + E + +L + ++A A+ Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY-- 126
Query: 581 HHCQPS-IVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVG 639
C ++H D+KP N+LL G+L +A F + ++ T + GT+
Sbjct: 127 --CHSKRVIHRDIKPENLLLGS-----AGELKIANFGWSVHAPSSRRTT-----LCGTLD 174
Query: 640 YVAPVIIAAR 649
Y+ P +I R
Sbjct: 175 YLPPEMIEGR 184
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 50/118 (42%), Gaps = 5/118 (4%)
Query: 502 KVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLR--LCN 559
K++ + + + E L RH N+I I I + E I + L
Sbjct: 57 KISPFEHQTYCQRTLREIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK 116
Query: 560 LSLTQRVNIAIDVAFAIEYLR---HHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
L TQ ++ F + LR + +++H DLKPSN+LL+ + D GLA+
Sbjct: 117 LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR 174
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Query: 560 LSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617
L+L + + VA +E+L +H DL NILL + V + D GLA+ +Y
Sbjct: 197 LTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIY 251
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 76/190 (40%), Gaps = 32/190 (16%)
Query: 478 ATNNFSPANKIREGGFNIVY---------NVAMKV---ANLKQKEASRSFAAEFNALRNI 525
A +F + +G F VY +A+KV A L++ E ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 526 RHRNLIKIITICSSID--FEGFDFKAISNGQLRLCNLSL--TQRVNIAI-DVAFAIEYLR 580
RH N++++ + ++ + L LS QR I ++A A+ Y
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY-- 123
Query: 581 HHCQPS-IVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVG 639
C ++H D+KP N+LL G+L +A F + + +S + GT+
Sbjct: 124 --CHSKRVIHRDIKPENLLLGS-----AGELKIADFGW-----SVHAPSSRRXXLCGTLD 171
Query: 640 YVAPVIIAAR 649
Y+ P +I R
Sbjct: 172 YLPPEMIEGR 181
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Query: 560 LSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617
L+L + + VA +E+L +H DL NILL + V + D GLA+ +Y
Sbjct: 195 LTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIY 249
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 39/190 (20%), Positives = 72/190 (37%), Gaps = 32/190 (16%)
Query: 478 ATNNFSPANKIREGGFNIVY---------NVAMKV---ANLKQKEASRSFAAEFNALRNI 525
A +F + +G F VY +A+KV A L++ E ++
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 526 RHRNLIKIITICSS-----IDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLR 580
RH N++++ + E + +L + ++A A+ Y
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY-- 120
Query: 581 HHCQPS-IVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVG 639
C ++H D+KP N+LL G+L +A F + ++ T + GT+
Sbjct: 121 --CHSKRVIHRDIKPENLLLGS-----AGELKIADFGWSVHAPSSRRTT-----LCGTLD 168
Query: 640 YVAPVIIAAR 649
Y+ P +I R
Sbjct: 169 YLPPEMIEGR 178
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/128 (24%), Positives = 57/128 (44%), Gaps = 11/128 (8%)
Query: 494 NIVYNVAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSS----IDFEGFDFKA 549
N+ K L KE F +E ++N+ H +++K+I I I E + +
Sbjct: 38 NVAVKTCKKDCTLDNKE---KFMSEAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYPYGE 94
Query: 550 ISNGQLRLCN-LSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVG 608
+ + R N L + V ++ + A+ YL + VH D+ NIL+ +G
Sbjct: 95 LGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLG 151
Query: 609 DLGLAKFL 616
D GL++++
Sbjct: 152 DFGLSRYI 159
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 77/184 (41%), Gaps = 31/184 (16%)
Query: 479 TNNFSPANKIREGGFNIVYNVAMKVANLKQKEASR------SFAAEFNALRNIRHRNLIK 532
+ F+ K RE + Y A K ++ ++SR E + L+ I+H N+I
Sbjct: 21 SGQFAVVKKCREKSTGLQY--AAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 533 IITICSSIDFEGFDFKAISNGQL-----RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSI 587
+ + + + ++ G+L +L+ + + + YL H Q I
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYL-HSLQ--I 135
Query: 588 VHGDLKPSNI-LLDQDVVT---HVGDLGLA-KFLYGYEPGTTAETASSSIGINGTVGYVA 642
H DLKP NI LLD++V + D GLA K +G E I GT +VA
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----------NIFGTPAFVA 185
Query: 643 PVII 646
P I+
Sbjct: 186 PEIV 189
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 41/86 (47%), Gaps = 11/86 (12%)
Query: 564 QRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623
Q V A +++ + +L I++ DLK N++LD + + D G+ K + + T
Sbjct: 121 QAVFYAAEISIGLFFLHKR---GIIYRDLKLDNVMLDSEGHIKIADFGMCK-EHMMDGVT 176
Query: 624 TAETASSSIGINGTVGYVAPVIIAAR 649
T E GT Y+AP IIA +
Sbjct: 177 TREFC-------GTPDYIAPEIIAYQ 195
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Query: 560 LSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617
L+L + + VA +E+L +H DL NILL + V + D GLA+ +Y
Sbjct: 141 LTLEHLICYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIY 195
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 32/63 (50%), Gaps = 10/63 (15%)
Query: 587 IVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVII 646
++H D+KP N+LL + G+L +A F + ++ T + GT+ Y+ P +I
Sbjct: 133 VIHRDIKPENLLLGSN-----GELKIADFGWSVHAPSSRRTT-----LCGTLDYLPPEMI 182
Query: 647 AAR 649
R
Sbjct: 183 EGR 185
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 34/148 (22%), Positives = 63/148 (42%), Gaps = 11/148 (7%)
Query: 492 GFNIVYNVAMKVAN-LKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAI 550
G + VA+K+ N +A+ F E + ++ H +L++++ +C S + + +
Sbjct: 40 GETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQ-LVTQLM 98
Query: 551 SNGQL------RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVV 604
+G L N+ +N + +A + YL +VH DL N+L+
Sbjct: 99 PHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNH 155
Query: 605 THVGDLGLAKFLYGYEPGTTAETASSSI 632
+ D GLA+ L G E A+ I
Sbjct: 156 VKITDFGLARLLEGDEKEYNADGGKMPI 183
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 76/190 (40%), Gaps = 32/190 (16%)
Query: 478 ATNNFSPANKIREGGFNIVY---------NVAMKV---ANLKQKEASRSFAAEFNALRNI 525
A +F + +G F VY +A+KV A L++ E ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 526 RHRNLIKIITICSSID--FEGFDFKAISNGQLRLCNLSL--TQRVNIAI-DVAFAIEYLR 580
RH N++++ + ++ + L LS QR I ++A A+ Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY-- 126
Query: 581 HHCQPS-IVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVG 639
C ++H D+KP N+LL G+L +A F + + +S + GT+
Sbjct: 127 --CHSKRVIHRDIKPENLLLGS-----AGELKIADFGW-----SVHAPSSRRXXLCGTLD 174
Query: 640 YVAPVIIAAR 649
Y+ P +I R
Sbjct: 175 YLPPEMIEGR 184
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%), Gaps = 12/64 (18%)
Query: 587 IVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG-YEPGTTAETASSSIGINGTVGYVAPVI 645
++H D+KP N+LL + G+L +A F + + P + +T + GT+ Y+ P +
Sbjct: 133 VIHRDIKPENLLLGSN-----GELKIADFGWSVHAPSSRRDT------LCGTLDYLPPEM 181
Query: 646 IAAR 649
I R
Sbjct: 182 IEGR 185
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 67/156 (42%), Gaps = 29/156 (18%)
Query: 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAA--EFNALRNIRHR 528
+ KI EG + V+ VA+K L + +A E L+ ++H+
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHK 61
Query: 529 NLIKIITICSS-------IDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRH 581
N++++ + S +F D K + CN L + I +F + L+
Sbjct: 62 NIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDS----CNGDL----DPEIVKSFLFQLLKG 113
Query: 582 --HCQP-SIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
C +++H DLKP N+L++++ + + GLA+
Sbjct: 114 LGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLAR 149
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 39/190 (20%), Positives = 72/190 (37%), Gaps = 32/190 (16%)
Query: 478 ATNNFSPANKIREGGFNIVY---------NVAMKV---ANLKQKEASRSFAAEFNALRNI 525
A +F + +G F VY +A+KV A L++ E ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 526 RHRNLIKIITICSS-----IDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLR 580
RH N++++ + E + +L + ++A A+ Y
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSY-- 126
Query: 581 HHCQPS-IVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVG 639
C ++H D+KP N+LL G+L +A F + + +S + GT+
Sbjct: 127 --CHSKRVIHRDIKPENLLLGS-----AGELKIADFGW-----SVHAPSSRRDDLCGTLD 174
Query: 640 YVAPVIIAAR 649
Y+ P +I R
Sbjct: 175 YLPPEMIEGR 184
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 45/206 (21%), Positives = 82/206 (39%), Gaps = 34/206 (16%)
Query: 463 MKQQFPMISHAELSKAT-------NNFSPANKIREGGFNIVYNVAMKVANLKQKEASRSF 515
M Q+ P EL+K N SP G ++ + K+ SR F
Sbjct: 1 MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTG-HRVAVKKLSRPF 59
Query: 516 AA---------EFNALRNIRHRNLIKIITICS-SIDFEGF-DFKAISNGQ-LRLCNLSLT 563
+ E L++++H N+I ++ + + + E F D +++ L N+
Sbjct: 60 QSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC 119
Query: 564 QRV---NIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620
Q++ ++ + + L++ I+H DLKPSN+ +++D + D LA+
Sbjct: 120 QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLAR------ 173
Query: 621 PGTTAETASSSIGINGTVGYVAPVII 646
T G T Y AP I+
Sbjct: 174 -----HTDDEMTGYVATRWYRAPEIM 194
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
Query: 569 AIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQ 601
I++ A+ YLR + S+ H DLKP NILLD
Sbjct: 143 CIEILKALNYLR---KMSLTHTDLKPENILLDD 172
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 7/63 (11%)
Query: 584 QPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAP 643
Q IVH DLKP+N L+ D + + D G+A + +P S + GTV Y+ P
Sbjct: 145 QHGIVHSDLKPANFLI-VDGMLKLIDFGIANQM---QPDXXXVVKDSQV---GTVNYMPP 197
Query: 644 VII 646
I
Sbjct: 198 EAI 200
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 31.2 bits (69), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 50/118 (42%), Gaps = 5/118 (4%)
Query: 502 KVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLR--LCN 559
K++ + + + E L RH N+I I I + E I + L
Sbjct: 57 KISPFEHQTYCQRTLREIKILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK 116
Query: 560 LSLTQRVNIAIDVAFAIEYLR---HHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
L TQ ++ F + LR + +++H DLKPSN+LL+ + D GLA+
Sbjct: 117 LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLAR 174
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 13/91 (14%)
Query: 568 IAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLD---QDVVTHVGDLGLA---KFLYGYEP 621
+ DVA A+++L + I H DLKP NIL + Q + D GL K P
Sbjct: 116 VVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSP 172
Query: 622 GTTAETASSSIGINGTVGYVAPVIIAARNLE 652
+T E + G+ Y+AP ++ A + E
Sbjct: 173 ISTPELLTPC----GSAEYMAPEVVEAFSEE 199
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 53/118 (44%), Gaps = 5/118 (4%)
Query: 502 KVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGF-DFKAISN-GQLRLCN 559
K++ + + + E L RH N+I I I + E D + + + L
Sbjct: 75 KISPFEHQTYCQRTLREIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYK 134
Query: 560 LSLTQRVNIAIDVAFAIEYLR---HHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
L +Q+++ F + LR + +++H DLKPSN+L++ + D GLA+
Sbjct: 135 LLKSQQLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLAR 192
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 31.2 bits (69), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 10/68 (14%)
Query: 587 IVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVII 646
++H D+KP N+LL G+L +A F + ++ T + GT+ Y+ P I
Sbjct: 134 VIHRDIKPENLLLGS-----AGELKIADFGWSVHAPSSRRTT-----LCGTLDYLPPEXI 183
Query: 647 AARNLENR 654
R + +
Sbjct: 184 EGRXHDEK 191
>pdb|3T6Q|A Chain A, Crystal Structure Of Mouse Rp105MD-1 Complex
pdb|3T6Q|B Chain B, Crystal Structure Of Mouse Rp105MD-1 Complex
Length = 606
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 228 IRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHL-QGSI-----LSSLGNLTL 281
+NL L L + S L + L P LQ LN+ GNH +G+I L +LG L +
Sbjct: 421 FQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEI 480
Query: 282 QTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTST 316
F +L + + K + + +SHN+LTS+
Sbjct: 481 LVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSS 515
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 69/174 (39%), Gaps = 24/174 (13%)
Query: 487 KIREGGFNIV---------YNVAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITIC 537
KI EG IV VA+K +L++++ E +R+ H N++ + +
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSY 111
Query: 538 SSIDFEGFDFKAISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLK 593
D + + G L ++ Q + + V A+ YL H Q ++H D+K
Sbjct: 112 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLRALSYL--HNQ-GVIHRDIK 168
Query: 594 PSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIA 647
+ILL D + D G ++ + GT ++AP +I+
Sbjct: 169 SDSILLTSDGRIKLSDFGFC--------AQVSKEVPKRKXLVGTPYWMAPEVIS 214
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Query: 561 SLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
+L + + +A ++A + YL VH DL N ++ D +GD G+ +
Sbjct: 128 TLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Query: 561 SLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
+L + + +A ++A + YL VH DL N ++ D +GD G+ +
Sbjct: 125 TLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR 175
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Query: 561 SLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
+L + + +A ++A + YL VH DL N ++ D +GD G+ +
Sbjct: 128 TLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR 178
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 31.2 bits (69), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/57 (24%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Query: 561 SLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617
+L + + +A ++A + YL VH +L N ++ D +GD G+ + +Y
Sbjct: 128 TLQEMIQMAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIY 181
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 31.2 bits (69), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/57 (24%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Query: 561 SLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617
+L + + +A ++A + YL VH +L N ++ D +GD G+ + +Y
Sbjct: 129 TLQEMIQMAAEIADGMAYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIY 182
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 11/64 (17%)
Query: 581 HHCQPSIVHGDLKPSNILLDQDV-VTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVG 639
H P I+H DLK NI + +GDLGLA T + AS + + GT
Sbjct: 146 HTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLA----------TLKRASFAKAVIGTPE 195
Query: 640 YVAP 643
+ AP
Sbjct: 196 FXAP 199
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 77/184 (41%), Gaps = 31/184 (16%)
Query: 479 TNNFSPANKIREGGFNIVYNVAMKVANLKQKEASR------SFAAEFNALRNIRHRNLIK 532
+ F+ K RE + Y A K ++ ++SR E + L+ I+H N+I
Sbjct: 21 SGQFAVVKKCREKSTGLQY--AAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 533 IITICSSIDFEGFDFKAISNGQL-----RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSI 587
+ + + + ++ G+L +L+ + + + YL H Q I
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYL-HSLQ--I 135
Query: 588 VHGDLKPSNI-LLDQDVVT---HVGDLGLA-KFLYGYEPGTTAETASSSIGINGTVGYVA 642
H DLKP NI LLD++V + D GLA K +G E I GT +VA
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----------NIFGTPEFVA 185
Query: 643 PVII 646
P I+
Sbjct: 186 PEIV 189
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 50/137 (36%), Gaps = 33/137 (24%)
Query: 499 VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNG----Q 554
VA+K + R F E L+ + ++K ++ +S G +
Sbjct: 39 VAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK--------------YRGVSYGPGRPE 84
Query: 555 LRL--------CNLSLTQRVNIAIDVAFAIEYLRHHCQ-------PSIVHGDLKPSNILL 599
LRL C QR +D + + Y C+ VH DL NIL+
Sbjct: 85 LRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILV 144
Query: 600 DQDVVTHVGDLGLAKFL 616
+ + + D GLAK L
Sbjct: 145 ESEAHVKIADFGLAKLL 161
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 8/60 (13%)
Query: 587 IVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVII 646
I++ DLK N+LLD + + D G+ K G G T T GT Y+AP I+
Sbjct: 145 IIYRDLKLDNVLLDHEGHCKLADFGMCK--EGICNGVTTAT------FCGTPDYIAPEIL 196
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 37/74 (50%), Gaps = 11/74 (14%)
Query: 576 IEYLRHHCQPSIVHGDLKPSNILL---DQDVVTHVGDLGLAKFLYGYEPGTTAETASSSI 632
+E LR+ +I+H D+KP N+LL + +GD G+A L E+ +
Sbjct: 140 LEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQL--------GESGLVAG 191
Query: 633 GINGTVGYVAPVII 646
G GT ++AP ++
Sbjct: 192 GRVGTPHFMAPEVV 205
>pdb|1OZN|A Chain A, 1.5a Crystal Structure Of The Nogo Receptor Ligand Binding
Domain Reveals A Convergent Recognition Scaffold
Mediating Inhibition Of Myelination
Length = 285
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 62/159 (38%), Gaps = 14/159 (8%)
Query: 131 LEMIEFSRN-QFSGGVSVDFSRLKNLSWLNL---GVNNLGSGTANELDFINLLTNCSKLE 186
LE ++ S N Q F L L L+L G+ LG G L + L+
Sbjct: 82 LEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPG---------LFRGLAALQ 132
Query: 187 RLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIG 246
LY N + + + +L + + + + NRISS R L +L+ L + +++
Sbjct: 133 YLYLQDNALQALPDDTFRDLGN-LTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAH 191
Query: 247 TIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQTYL 285
P + L L + N+L +L L YL
Sbjct: 192 VHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYL 230
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 30.8 bits (68), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 49/118 (41%), Gaps = 5/118 (4%)
Query: 502 KVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQLRLCNLS 561
K++ + + + E L RH N+I I I + E I +
Sbjct: 59 KISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYK 118
Query: 562 LTQRVNIAIDVAFAIEY-----LRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
L + +++ D Y L++ +++H DLKPSN+LL+ + D GLA+
Sbjct: 119 LLKCQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLAR 176
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 30.8 bits (68), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 52/118 (44%), Gaps = 5/118 (4%)
Query: 502 KVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGF-DFKAISNGQ-LRLCN 559
K++ + + + E L RH N+I I I + E D +++ L
Sbjct: 75 KISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYK 134
Query: 560 LSLTQRVNIAIDVAFAIEYLR---HHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
L TQ ++ F + LR + +++H DLKPSN+LL+ + D GLA+
Sbjct: 135 LLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLAR 192
>pdb|1P8T|A Chain A, Crystal Structure Of Nogo-66 Receptor
Length = 285
Score = 30.8 bits (68), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 62/159 (38%), Gaps = 14/159 (8%)
Query: 131 LEMIEFSRN-QFSGGVSVDFSRLKNLSWLNL---GVNNLGSGTANELDFINLLTNCSKLE 186
LE ++ S N Q F L L L+L G+ LG G L + L+
Sbjct: 81 LEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPG---------LFRGLAALQ 131
Query: 187 RLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIG 246
LY N + + + +L + + + + NRISS R L +L+ L + +++
Sbjct: 132 YLYLQDNALQALPDDTFRDLGN-LTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAH 190
Query: 247 TIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQTYL 285
P + L L + N+L +L L YL
Sbjct: 191 VHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYL 229
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 77/185 (41%), Gaps = 31/185 (16%)
Query: 478 ATNNFSPANKIREGGFNIVYNVAMKVANLKQKEASR------SFAAEFNALRNIRHRNLI 531
+ F+ K RE + Y A K ++ ++SR E + L+ I+H N+I
Sbjct: 20 GSGQFAVVKKCREKSTGLQY--AAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 532 KIITICSSIDFEGFDFKAISNGQL-----RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPS 586
+ + + + ++ G+L +L+ + + + YL H Q
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYL-HSLQ-- 134
Query: 587 IVHGDLKPSNI-LLDQDVVT---HVGDLGLA-KFLYGYEPGTTAETASSSIGINGTVGYV 641
I H DLKP NI LLD++V + D GLA K +G E I GT +V
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----------NIFGTPEFV 184
Query: 642 APVII 646
AP I+
Sbjct: 185 APEIV 189
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 77/185 (41%), Gaps = 31/185 (16%)
Query: 478 ATNNFSPANKIREGGFNIVYNVAMKVANLKQKEASR------SFAAEFNALRNIRHRNLI 531
+ F+ K RE + Y A K ++ ++SR E + L+ I+H N+I
Sbjct: 19 GSGQFAVVKKCREKSTGLQY--AAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 76
Query: 532 KIITICSSIDFEGFDFKAISNGQL-----RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPS 586
+ + + + ++ G+L +L+ + + + YL H Q
Sbjct: 77 TLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYL-HSLQ-- 133
Query: 587 IVHGDLKPSNI-LLDQDVVT---HVGDLGLA-KFLYGYEPGTTAETASSSIGINGTVGYV 641
I H DLKP NI LLD++V + D GLA K +G E I GT +V
Sbjct: 134 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----------NIFGTPEFV 183
Query: 642 APVII 646
AP I+
Sbjct: 184 APEIV 188
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 30.4 bits (67), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 19/27 (70%)
Query: 587 IVHGDLKPSNILLDQDVVTHVGDLGLA 613
I+H D+KPSNILLD+ + D G++
Sbjct: 147 IIHRDIKPSNILLDRSGNIKLCDFGIS 173
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 30.4 bits (67), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 77/185 (41%), Gaps = 31/185 (16%)
Query: 478 ATNNFSPANKIREGGFNIVYNVAMKVANLKQKEASR------SFAAEFNALRNIRHRNLI 531
+ F+ K RE + Y A K ++ ++SR E + L+ I+H N+I
Sbjct: 19 GSGQFAVVKKCREKSTGLQY--AAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 76
Query: 532 KIITICSSIDFEGFDFKAISNGQL-----RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPS 586
+ + + + ++ G+L +L+ + + + YL H Q
Sbjct: 77 TLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYL-HSLQ-- 133
Query: 587 IVHGDLKPSNI-LLDQDVVT---HVGDLGLA-KFLYGYEPGTTAETASSSIGINGTVGYV 641
I H DLKP NI LLD++V + D GLA K +G E I GT +V
Sbjct: 134 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----------NIFGTPEFV 183
Query: 642 APVII 646
AP I+
Sbjct: 184 APEIV 188
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 30.4 bits (67), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 77/185 (41%), Gaps = 31/185 (16%)
Query: 478 ATNNFSPANKIREGGFNIVYNVAMKVANLKQKEASR------SFAAEFNALRNIRHRNLI 531
+ F+ K RE + Y A K ++ ++SR E + L+ I+H N+I
Sbjct: 20 GSGQFAVVKKCREKSTGLQY--AAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 532 KIITICSSIDFEGFDFKAISNGQL-----RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPS 586
+ + + + ++ G+L +L+ + + + YL H Q
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYL-HSLQ-- 134
Query: 587 IVHGDLKPSNI-LLDQDVVT---HVGDLGLA-KFLYGYEPGTTAETASSSIGINGTVGYV 641
I H DLKP NI LLD++V + D GLA K +G E I GT +V
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----------NIFGTPEFV 184
Query: 642 APVII 646
AP I+
Sbjct: 185 APEIV 189
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 30.4 bits (67), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 77/185 (41%), Gaps = 31/185 (16%)
Query: 478 ATNNFSPANKIREGGFNIVYNVAMKVANLKQKEASR------SFAAEFNALRNIRHRNLI 531
+ F+ K RE + Y A K ++ ++SR E + L+ I+H N+I
Sbjct: 20 GSGKFAVVKKCREKSTGLQY--AAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 532 KIITICSSIDFEGFDFKAISNGQL-----RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPS 586
+ + + + ++ G+L +L+ + + + YL H Q
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYL-HSLQ-- 134
Query: 587 IVHGDLKPSNI-LLDQDVVT---HVGDLGLA-KFLYGYEPGTTAETASSSIGINGTVGYV 641
I H DLKP NI LLD++V + D GLA K +G E I GT +V
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----------NIFGTPEFV 184
Query: 642 APVII 646
AP I+
Sbjct: 185 APEIV 189
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 30.4 bits (67), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 9/82 (10%)
Query: 575 AIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVG--DLGLAKFLYGYEPGTTAETASSSI 632
+EYL I+HGD+K N+LL D +H D G A L +P ++ +
Sbjct: 197 GLEYLHSR---RILHGDVKADNVLLSSD-GSHAALCDFGHAVCL---QPDGLGKSLLTGD 249
Query: 633 GINGTVGYVAPVIIAARNLENR 654
I GT ++AP ++ R+ + +
Sbjct: 250 YIPGTETHMAPEVVLGRSCDAK 271
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 30.4 bits (67), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 77/185 (41%), Gaps = 31/185 (16%)
Query: 478 ATNNFSPANKIREGGFNIVYNVAMKVANLKQKEASR------SFAAEFNALRNIRHRNLI 531
+ F+ K RE + Y A K ++ ++SR E + L+ I+H N+I
Sbjct: 20 GSGQFAVVKKCREKSTGLQY--AAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 532 KIITICSSIDFEGFDFKAISNGQL-----RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPS 586
+ + + + ++ G+L +L+ + + + YL H Q
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYL-HSLQ-- 134
Query: 587 IVHGDLKPSNI-LLDQDVVT---HVGDLGLA-KFLYGYEPGTTAETASSSIGINGTVGYV 641
I H DLKP NI LLD++V + D GLA K +G E I GT +V
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----------NIFGTPEFV 184
Query: 642 APVII 646
AP I+
Sbjct: 185 APEIV 189
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 30.4 bits (67), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 11/95 (11%)
Query: 560 LSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGY 619
L TQ I ++ ++YL H + I H D+K +N+LL + + D G+A
Sbjct: 101 LDETQIATILREILKGLDYL--HSEKKI-HRDIKAANVLLSEHGEVKLADFGVA------ 151
Query: 620 EPGTTAETASSSIGINGTVGYVAPVIIAARNLENR 654
G +T GT ++AP +I +++
Sbjct: 152 --GQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSK 184
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 30.4 bits (67), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 77/185 (41%), Gaps = 31/185 (16%)
Query: 478 ATNNFSPANKIREGGFNIVYNVAMKVANLKQKEASR------SFAAEFNALRNIRHRNLI 531
+ F+ K RE + Y A K ++ ++SR E + L+ I+H N+I
Sbjct: 20 GSGQFAVVKKCREKSTGLQY--AAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 532 KIITICSSIDFEGFDFKAISNGQL-----RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPS 586
+ + + + ++ G+L +L+ + + + YL H Q
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYL-HSLQ-- 134
Query: 587 IVHGDLKPSNI-LLDQDVVT---HVGDLGLA-KFLYGYEPGTTAETASSSIGINGTVGYV 641
I H DLKP NI LLD++V + D GLA K +G E I GT +V
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----------NIFGTPEFV 184
Query: 642 APVII 646
AP I+
Sbjct: 185 APEIV 189
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 30.4 bits (67), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 74/184 (40%), Gaps = 26/184 (14%)
Query: 480 NNFSPANKIREGGFNIVY---------NVAMKVANLKQKEASRSFAAEFNALRNIRHRNL 530
++ KI +G VY VA++ NL+Q+ E +R ++ N+
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNI 79
Query: 531 IKIITICSSIDFEGFDFKAISNGQL-----RLCNLSLTQRVNIAIDVAFAIEYLRHHCQP 585
+ + D + ++ G L C + Q + + A+E+L +
Sbjct: 80 VNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC-MDEGQIAAVCRECLQALEFLHSN--- 135
Query: 586 SIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVI 645
++H D+K NILL D G + L F G+ T E + S + GT ++AP +
Sbjct: 136 QVIHRDIKSDNILLGMD-----GSVKLTDF--GFCAQITPEQSKRSTMV-GTPYWMAPEV 187
Query: 646 IAAR 649
+ +
Sbjct: 188 VTRK 191
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 30.4 bits (67), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 74/184 (40%), Gaps = 26/184 (14%)
Query: 480 NNFSPANKIREGGFNIVY---------NVAMKVANLKQKEASRSFAAEFNALRNIRHRNL 530
++ KI +G VY VA++ NL+Q+ E +R ++ N+
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNI 79
Query: 531 IKIITICSSIDFEGFDFKAISNGQL-----RLCNLSLTQRVNIAIDVAFAIEYLRHHCQP 585
+ + D + ++ G L C + Q + + A+E+L +
Sbjct: 80 VNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC-MDEGQIAAVCRECLQALEFLHSN--- 135
Query: 586 SIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVI 645
++H D+K NILL D G + L F G+ T E + S + GT ++AP +
Sbjct: 136 QVIHRDIKSDNILLGMD-----GSVKLTDF--GFCAQITPEQSKRSXMV-GTPYWMAPEV 187
Query: 646 IAAR 649
+ +
Sbjct: 188 VTRK 191
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 77/185 (41%), Gaps = 31/185 (16%)
Query: 478 ATNNFSPANKIREGGFNIVYNVAMKVANLKQKEASR------SFAAEFNALRNIRHRNLI 531
+ F+ K RE + Y A K ++ ++SR E + L+ I+H N+I
Sbjct: 20 GSGQFAVVKKCREKSTGLQY--AAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 532 KIITICSSIDFEGFDFKAISNGQL-----RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPS 586
+ + + + ++ G+L +L+ + + + YL H Q
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYL-HSLQ-- 134
Query: 587 IVHGDLKPSNI-LLDQDVVT---HVGDLGLA-KFLYGYEPGTTAETASSSIGINGTVGYV 641
I H DLKP NI LLD++V + D GLA K +G E I GT +V
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----------NIFGTPEFV 184
Query: 642 APVII 646
AP I+
Sbjct: 185 APEIV 189
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 560 LSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
L+L + + VA +E+L +H DL NILL + V + D GLA+
Sbjct: 145 LTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 77/185 (41%), Gaps = 31/185 (16%)
Query: 478 ATNNFSPANKIREGGFNIVYNVAMKVANLKQKEASR------SFAAEFNALRNIRHRNLI 531
+ F+ K RE + Y A K ++ ++SR E + L+ I+H N+I
Sbjct: 20 GSGQFAVVKKCREKSTGLQY--AAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 532 KIITICSSIDFEGFDFKAISNGQL-----RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPS 586
+ + + + ++ G+L +L+ + + + YL H Q
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYL-HSLQ-- 134
Query: 587 IVHGDLKPSNI-LLDQDVVT---HVGDLGLA-KFLYGYEPGTTAETASSSIGINGTVGYV 641
I H DLKP NI LLD++V + D GLA K +G E I GT +V
Sbjct: 135 IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN----------IFGTPEFV 184
Query: 642 APVII 646
AP I+
Sbjct: 185 APEIV 189
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 559 NLSLTQRVNIAIDVA-FAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLA 613
+L+L V+ A +A +E +P+I H D K N+L+ ++ + DLGLA
Sbjct: 105 HLALRLAVSAACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLA 160
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 11/95 (11%)
Query: 560 LSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGY 619
L TQ I ++ ++YL H + I H D+K +N+LL + + D G+A
Sbjct: 101 LDETQIATILREILKGLDYL--HSEKKI-HRDIKAANVLLSEHGEVKLADFGVA------ 151
Query: 620 EPGTTAETASSSIGINGTVGYVAPVIIAARNLENR 654
G +T GT ++AP +I +++
Sbjct: 152 --GQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSK 184
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 30.0 bits (66), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 560 LSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
L+L + + VA +E+L +H DL NILL + V + D GLA+
Sbjct: 136 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 187
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
Query: 566 VNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTA 625
+N + +A + YL +VH DL N+L+ + D GLAK L E A
Sbjct: 154 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 210
Query: 626 ETASSSI 632
E I
Sbjct: 211 EGGKVPI 217
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 30.0 bits (66), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 560 LSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
L+L + + VA +E+L +H DL NILL + V + D GLA+
Sbjct: 136 LTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR 187
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 30.0 bits (66), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
Query: 566 VNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTA 625
+N + +A + YL +VH DL N+L+ + D GLAK L E A
Sbjct: 120 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 176
Query: 626 ETASSSI 632
E I
Sbjct: 177 EGGKVPI 183
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 30.0 bits (66), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 74/184 (40%), Gaps = 26/184 (14%)
Query: 480 NNFSPANKIREGGFNIVY---------NVAMKVANLKQKEASRSFAAEFNALRNIRHRNL 530
++ KI +G VY VA++ NL+Q+ E +R ++ N+
Sbjct: 21 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNI 80
Query: 531 IKIITICSSIDFEGFDFKAISNGQL-----RLCNLSLTQRVNIAIDVAFAIEYLRHHCQP 585
+ + D + ++ G L C + Q + + A+E+L +
Sbjct: 81 VNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC-MDEGQIAAVCRECLQALEFLHSN--- 136
Query: 586 SIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVI 645
++H D+K NILL D G + L F G+ T E + S + GT ++AP +
Sbjct: 137 QVIHRDIKSDNILLGMD-----GSVKLTDF--GFCAQITPEQSKRSXMV-GTPYWMAPEV 188
Query: 646 IAAR 649
+ +
Sbjct: 189 VTRK 192
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 30.0 bits (66), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 77/184 (41%), Gaps = 31/184 (16%)
Query: 479 TNNFSPANKIREGGFNIVYNVAMKVANLKQKEASR------SFAAEFNALRNIRHRNLIK 532
+ F+ K RE + Y A K ++ ++SR E + L+ I+H N+I
Sbjct: 21 SGQFAVVKKCREKSTGLQY--AAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 533 IITICSSIDFEGFDFKAISNGQL-----RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSI 587
+ + + + ++ G+L +L+ + + + YL H Q I
Sbjct: 79 LHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYL-HSLQ--I 135
Query: 588 VHGDLKPSNI-LLDQDVVT---HVGDLGLA-KFLYGYEPGTTAETASSSIGINGTVGYVA 642
H DLKP NI LLD++V + D GLA K +G E I GT +VA
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----------NIFGTPEFVA 185
Query: 643 PVII 646
P I+
Sbjct: 186 PEIV 189
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
Query: 566 VNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTA 625
+N + +A + YL +VH DL N+L+ + D GLAK L E A
Sbjct: 130 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 186
Query: 626 ETASSSI 632
E I
Sbjct: 187 EGGKVPI 193
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 30.0 bits (66), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 11/95 (11%)
Query: 560 LSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGY 619
L TQ I ++ ++YL H + I H D+K +N+LL + + D G+A
Sbjct: 116 LDETQIATILREILKGLDYL--HSEKKI-HRDIKAANVLLSEHGEVKLADFGVA------ 166
Query: 620 EPGTTAETASSSIGINGTVGYVAPVIIAARNLENR 654
G +T GT ++AP +I +++
Sbjct: 167 --GQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSK 199
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 30.0 bits (66), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 31/155 (20%), Positives = 69/155 (44%), Gaps = 15/155 (9%)
Query: 499 VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQL--- 555
V +KV + + S SF + + + H++L+ +C D + + G L
Sbjct: 43 VLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTY 102
Query: 556 ----RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLG 611
+ C +++ ++ +A +A+A+ +L + +++HG++ NILL ++ G+
Sbjct: 103 LKKNKNC-INILWKLEVAKQLAWAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGN-- 156
Query: 612 LAKFLYGYEPGTTAETASSSIGINGTVGYVAPVII 646
F+ +PG + I + + +V P I
Sbjct: 157 -PPFIKLSDPGISITVLPKDI-LQERIPWVPPECI 189
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 30.0 bits (66), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
Query: 566 VNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTA 625
+N + +A + YL +VH DL N+L+ + D GLAK L E A
Sbjct: 120 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 176
Query: 626 ETASSSI 632
E I
Sbjct: 177 EGGKVPI 183
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 30.0 bits (66), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 11/95 (11%)
Query: 560 LSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGY 619
L TQ I ++ ++YL H + I H D+K +N+LL + + D G+A
Sbjct: 121 LDETQIATILREILKGLDYL--HSEKKI-HRDIKAANVLLSEHGEVKLADFGVA------ 171
Query: 620 EPGTTAETASSSIGINGTVGYVAPVIIAARNLENR 654
G +T GT ++AP +I +++
Sbjct: 172 --GQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSK 204
>pdb|1H6U|A Chain A, Internalin H: Crystal Structure Of Fused N-Terminal
Domains
Length = 308
Score = 30.0 bits (66), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 64/148 (43%), Gaps = 30/148 (20%)
Query: 171 NELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRN 230
N++ + L N +K+ L + N + V +IA L S IK + + S +I+ P +
Sbjct: 73 NQITDLAPLKNLTKITELELSGNPLKNV--SAIAGLQS-IKTLDLTSTQITDVTP--LAG 127
Query: 231 LVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQ 290
L NL L ++ +Q I I PL G T NLQ L+IG N Q
Sbjct: 128 LSNLQVLYLDLNQ-ITNISPLAGLT-NLQYLSIG-----------------------NAQ 162
Query: 291 GNIPSSLANCKSLLGLSVSHNKLTSTLP 318
+ + LAN L L NK++ P
Sbjct: 163 VSDLTPLANLSKLTTLKADDNKISDISP 190
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 30.0 bits (66), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 560 LSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
L+L + + VA +E+L +H DL NILL + V + D GLA+
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 30.0 bits (66), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 587 IVHGDLKPSNILLDQDV-VTHVGDLGLAKFLYGYEPGTT 624
I H D+KP N+LLD V + D G AK L EP +
Sbjct: 162 ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVS 200
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 30.0 bits (66), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
Query: 566 VNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTA 625
+N + +A + YL +VH DL N+L+ + D GLAK L E A
Sbjct: 127 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 183
Query: 626 ETASSSI 632
E I
Sbjct: 184 EGGKVPI 190
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 30.0 bits (66), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
Query: 566 VNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTA 625
+N + +A + YL +VH DL N+L+ + D GLAK L E A
Sbjct: 123 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 179
Query: 626 ETASSSI 632
E I
Sbjct: 180 EGGKVPI 186
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 30.0 bits (66), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 45/91 (49%), Gaps = 13/91 (14%)
Query: 568 IAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQ-DVVTHVG----DLGLAKFLYG-YEP 621
+ DVA A+++L + I H DLKP NIL + + V+ V DLG L G P
Sbjct: 116 VVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSP 172
Query: 622 GTTAETASSSIGINGTVGYVAPVIIAARNLE 652
+T E + G+ Y+AP ++ A + E
Sbjct: 173 ISTPELLTPC----GSAEYMAPEVVEAFSEE 199
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 30.0 bits (66), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 560 LSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614
L+L + + VA +E+L +H DL NILL + V + D GLA+
Sbjct: 145 LTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLAR 196
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 30.0 bits (66), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
Query: 566 VNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTA 625
+N + +A + YL +VH DL N+L+ + D GLAK L E A
Sbjct: 121 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 177
Query: 626 ETASSSI 632
E I
Sbjct: 178 EGGKVPI 184
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 30.0 bits (66), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
Query: 566 VNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTA 625
+N + +A + YL +VH DL N+L+ + D GLAK L E A
Sbjct: 122 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 178
Query: 626 ETASSSI 632
E I
Sbjct: 179 EGGKVPI 185
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 30.0 bits (66), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 588 VHGDLKPSNILLDQDVVTHVGDLGLAKFL 616
VH DL NIL++ + + D GLAK L
Sbjct: 149 VHRDLAARNILVESEAHVKIADFGLAKLL 177
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 30.0 bits (66), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
Query: 566 VNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTA 625
+N + +A + YL +VH DL N+L+ + D GLAK L E A
Sbjct: 120 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 176
Query: 626 ETASSSI 632
E I
Sbjct: 177 EGGKVPI 183
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 30.0 bits (66), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
Query: 566 VNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTA 625
+N + +A + YL +VH DL N+L+ + D GLAK L E A
Sbjct: 120 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 176
Query: 626 ETASSSI 632
E I
Sbjct: 177 EGGKVPI 183
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 30.0 bits (66), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
Query: 566 VNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTA 625
+N + +A + YL +VH DL N+L+ + D GLAK L E A
Sbjct: 124 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 180
Query: 626 ETASSSI 632
E I
Sbjct: 181 EGGKVPI 187
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 30.0 bits (66), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
Query: 566 VNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTA 625
+N + +A + YL +VH DL N+L+ + D GLAK L E A
Sbjct: 127 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 183
Query: 626 ETASSSI 632
E I
Sbjct: 184 EGGKVPI 190
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 29.6 bits (65), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
Query: 566 VNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTA 625
+N + +A + YL +VH DL N+L+ + D GLAK L E A
Sbjct: 123 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 179
Query: 626 ETASSSI 632
E I
Sbjct: 180 EGGKVPI 186
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 29.6 bits (65), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
Query: 566 VNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTA 625
+N + +A + YL +VH DL N+L+ + D GLAK L E A
Sbjct: 122 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 178
Query: 626 ETASSSI 632
E I
Sbjct: 179 EGGKVPI 185
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 29.6 bits (65), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 76/181 (41%), Gaps = 31/181 (17%)
Query: 482 FSPANKIREGGFNIVYNVAMKVANLKQKEASR------SFAAEFNALRNIRHRNLIKIIT 535
F+ K RE + Y A K ++ ++SR E + L+ I+H N+I +
Sbjct: 24 FAVVKKCREKSTGLQY--AAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHE 81
Query: 536 ICSSIDFEGFDFKAISNGQL-----RLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHG 590
+ + + ++ G+L +L+ + + + YL H Q I H
Sbjct: 82 VYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYL-HSLQ--IAHF 138
Query: 591 DLKPSNI-LLDQDVVT---HVGDLGLA-KFLYGYEPGTTAETASSSIGINGTVGYVAPVI 645
DLKP NI LLD++V + D GLA K +G E I GT +VAP I
Sbjct: 139 DLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----------NIFGTPEFVAPEI 188
Query: 646 I 646
+
Sbjct: 189 V 189
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 29.6 bits (65), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
Query: 566 VNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTA 625
+N + +A + YL +VH DL N+L+ + D GLAK L E A
Sbjct: 145 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 201
Query: 626 ETASSSI 632
E I
Sbjct: 202 EGGKVPI 208
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 29.6 bits (65), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
Query: 566 VNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTA 625
+N + +A + YL +VH DL N+L+ + D GLAK L E A
Sbjct: 123 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 179
Query: 626 ETASSSI 632
E I
Sbjct: 180 EGGKVPI 186
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 29.6 bits (65), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
Query: 566 VNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTA 625
+N + +A + YL +VH DL N+L+ + D GLAK L E A
Sbjct: 127 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 183
Query: 626 ETASSSI 632
E I
Sbjct: 184 EGGKVPI 190
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 29.6 bits (65), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 588 VHGDLKPSNILLDQDVVTHVGDLGLAKFL 616
VH DL NIL++ + + D GLAK L
Sbjct: 136 VHRDLAARNILVESEAHVKIADFGLAKLL 164
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 29.6 bits (65), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
Query: 566 VNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTA 625
+N + +A + YL +VH DL N+L+ + D GLAK L E A
Sbjct: 123 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 179
Query: 626 ETASSSI 632
E I
Sbjct: 180 EGGKVPI 186
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 29.6 bits (65), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 49/137 (35%), Gaps = 33/137 (24%)
Query: 499 VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNG----Q 554
VA+K + R F E L+ + ++K ++ +S G
Sbjct: 43 VAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK--------------YRGVSYGPGRQS 88
Query: 555 LRL--------CNLSLTQRVNIAIDVAFAIEYLRHHCQ-------PSIVHGDLKPSNILL 599
LRL C QR +D + + Y C+ VH DL NIL+
Sbjct: 89 LRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILV 148
Query: 600 DQDVVTHVGDLGLAKFL 616
+ + + D GLAK L
Sbjct: 149 ESEAHVKIADFGLAKLL 165
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 29.6 bits (65), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 76/191 (39%), Gaps = 43/191 (22%)
Query: 478 ATNNFSPANKIREGGFNIVYNVAMKVANLKQKEASR------SFAAEFNALRNIRHRNLI 531
+ F+ K RE + Y A K ++ ++SR E + L+ I+H N+I
Sbjct: 20 GSGQFAVVKKCREKSTGLQY--AAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 532 KIITICS-SIDF----------EGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLR 580
+ + D E FDF A +L+ + + + YL
Sbjct: 78 TLHEVYENKTDVILIGELVAGGELFDFLAEKE------SLTEEEATEFLKQILNGVYYL- 130
Query: 581 HHCQPSIVHGDLKPSNI-LLDQDVVT---HVGDLGLA-KFLYGYEPGTTAETASSSIGIN 635
H Q I H DLKP NI LLD++V + D GLA K +G E I
Sbjct: 131 HSLQ--IAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK----------NIF 178
Query: 636 GTVGYVAPVII 646
GT +VAP I+
Sbjct: 179 GTPEFVAPEIV 189
>pdb|3E7E|A Chain A, Structure And Substrate Recruitment Of The Human Spindle
Checkpoint Kinase Bub
Length = 365
Score = 29.6 bits (65), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 23/34 (67%), Gaps = 3/34 (8%)
Query: 566 VNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL 599
++ A+ + + IE + H C+ I+HGD+KP N +L
Sbjct: 175 ISFAMRMLYMIEQV-HDCE--IIHGDIKPDNFIL 205
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 29.6 bits (65), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
Query: 566 VNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTA 625
+N + +A + YL +VH DL N+L+ + D GLAK L E A
Sbjct: 126 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 182
Query: 626 ETASSSI 632
E I
Sbjct: 183 EGGKVPI 189
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 29.6 bits (65), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
Query: 566 VNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTA 625
+N + +A + YL +VH DL N+L+ + D GLAK L E A
Sbjct: 121 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 177
Query: 626 ETASSSI 632
E I
Sbjct: 178 EGGKVPI 184
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 29.6 bits (65), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
Query: 566 VNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTA 625
+N + +A + YL +VH DL N+L+ + D GLAK L E A
Sbjct: 114 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 170
Query: 626 ETASSSI 632
E I
Sbjct: 171 EGGKVPI 177
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 29.6 bits (65), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
Query: 566 VNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTA 625
+N + +A + YL +VH DL N+L+ + D GLAK L E A
Sbjct: 120 LNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 176
Query: 626 ETASSSI 632
E I
Sbjct: 177 EGGKVPI 183
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 29.6 bits (65), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
Query: 566 VNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTA 625
+N + +A + YL +VH DL N+L+ + D GLAK L E A
Sbjct: 117 LNWCVQIAEGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHA 173
Query: 626 ETASSSI 632
E I
Sbjct: 174 EGGKVPI 180
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 29.6 bits (65), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Query: 587 IVHGDLKPSNILLD-QDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGING 636
I+H D+KP N+++D Q + D GLA+F Y P +S G
Sbjct: 153 IMHRDVKPHNVMIDHQQKKLRLIDWGLAEF---YHPAQEYNVRVASRYFKG 200
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 29.6 bits (65), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
Query: 587 IVHGDLKPSNILLD-QDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGING 636
I+H D+KP N+++D Q + D GLA+F Y P +S G
Sbjct: 158 IMHRDVKPHNVMIDHQQKKLRLIDWGLAEF---YHPAQEYNVRVASRYFKG 205
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 29.6 bits (65), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 7/61 (11%)
Query: 588 VHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIA 647
VH D+KP NILLD+ G + LA F G A+ S+ GT Y++P I+
Sbjct: 184 VHRDIKPDNILLDR-----CGHIRLADF--GSCLKLRADGTVRSLVAVGTPDYLSPEILQ 236
Query: 648 A 648
A
Sbjct: 237 A 237
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 29.6 bits (65), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 7/55 (12%)
Query: 589 HGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAP 643
H D+KP NIL+ D ++ D G+A TT E + GT+ Y AP
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIAS-------ATTDEKLTQLGNTVGTLYYXAP 204
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 29.6 bits (65), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 9/82 (10%)
Query: 575 AIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVG--DLGLAKFLYGYEPGTTAETASSSI 632
+EYL I+HGD+K N+LL D +H D G A L +P + +
Sbjct: 178 GLEYLHSR---RILHGDVKADNVLLSSD-GSHAALCDFGHAVCL---QPDGLGKDLLTGD 230
Query: 633 GINGTVGYVAPVIIAARNLENR 654
I GT ++AP ++ R+ + +
Sbjct: 231 YIPGTETHMAPEVVLGRSCDAK 252
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 29.3 bits (64), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 74/184 (40%), Gaps = 26/184 (14%)
Query: 480 NNFSPANKIREGGFNIVY---------NVAMKVANLKQKEASRSFAAEFNALRNIRHRNL 530
++ KI +G VY VA++ NL+Q+ E +R ++ N+
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNI 79
Query: 531 IKIITICSSIDFEGFDFKAISNGQL-----RLCNLSLTQRVNIAIDVAFAIEYLRHHCQP 585
+ + D + ++ G L C + Q + + A+E+L +
Sbjct: 80 VNYLDSYLVGDELWVVMEYLAGGSLTDVVTETC-MDEGQIAAVCRECLQALEFLHSN--- 135
Query: 586 SIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVI 645
++H D+K NILL D G + L F G+ T E + S + GT ++AP +
Sbjct: 136 QVIHRDIKSDNILLGMD-----GSVKLTDF--GFCAQITPEQSKRSEMV-GTPYWMAPEV 187
Query: 646 IAAR 649
+ +
Sbjct: 188 VTRK 191
>pdb|4G8A|A Chain A, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
pdb|4G8A|B Chain B, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
Length = 635
Score = 29.3 bits (64), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 87/202 (43%), Gaps = 41/202 (20%)
Query: 130 SLEMIEFSRN--QFSGGVS-VDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLE 186
SLE ++ SRN F G S DF + +L +L+L N + + ++N F+ L +LE
Sbjct: 372 SLEFLDLSRNGLSFKGCCSQSDFGTI-SLKYLDLSFNGVITMSSN---FLGL----EQLE 423
Query: 187 RLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIG 246
L F S +KQ++ S +S +RNL+ +L + +
Sbjct: 424 HLDFQH---------------SNLKQMSEFSVFLS------LRNLI---YLDISHTHTRV 459
Query: 247 TIPPLIGETPNLQLLNIGGNHLQG----SILSSLGNLTLQTYLFNNLQGNIPSSLANCKS 302
+ +L++L + GN Q I + L NLT L+ P++ + S
Sbjct: 460 AFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSS 519
Query: 303 LLGLSVSHNKLTS--TLPQQIL 322
L L++SHN S T P + L
Sbjct: 520 LQVLNMSHNNFFSLDTFPYKCL 541
>pdb|3FXI|A Chain A, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
pdb|3FXI|B Chain B, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
Length = 605
Score = 29.3 bits (64), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 84/201 (41%), Gaps = 39/201 (19%)
Query: 130 SLEMIEFSRN--QFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLER 187
SLE ++ SRN F G S +L +L+L N + + ++N F+ L +LE
Sbjct: 348 SLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN---FLGL----EQLEH 400
Query: 188 LYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGT 247
L F S +KQ++ S +S +RNL+ +L + +
Sbjct: 401 LDFQH---------------SNLKQMSEFSVFLS------LRNLI---YLDISHTHTRVA 436
Query: 248 IPPLIGETPNLQLLNIGGNHLQG----SILSSLGNLTLQTYLFNNLQGNIPSSLANCKSL 303
+ +L++L + GN Q I + L NLT L+ P++ + SL
Sbjct: 437 FNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSL 496
Query: 304 LGLSVSHNKLTS--TLPQQIL 322
L++SHN S T P + L
Sbjct: 497 QVLNMSHNNFFSLDTFPYKCL 517
>pdb|2FT3|A Chain A, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|B Chain B, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|C Chain C, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|D Chain D, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|E Chain E, Crystal Structure Of The Biglycan Dimer Core Protein
pdb|2FT3|F Chain F, Crystal Structure Of The Biglycan Dimer Core Protein
Length = 332
Score = 28.9 bits (63), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 12/113 (10%)
Query: 133 MIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNR 192
+++ N S DF L++L L L VNN S +E F L KL++LY ++
Sbjct: 58 LLDLQNNDISELRKDDFKGLQHLYALVL-VNNKIS-KIHEKAFSPL----RKLQKLYISK 111
Query: 193 NGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGI-RNLVNLNWLTMESSQL 244
N + P NL S++ ++ + NRI +P G+ L N+N + M + L
Sbjct: 112 NHLVEIPP----NLPSSLVELRIHDNRIRK-VPKGVFSGLRNMNCIEMGGNPL 159
>pdb|1WWL|A Chain A, Crystal Structure Of Cd14
pdb|1WWL|B Chain B, Crystal Structure Of Cd14
Length = 312
Score = 28.9 bits (63), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 36/62 (58%), Gaps = 5/62 (8%)
Query: 207 SSTIKQIAMGSNRISSTIPHG---IRNLVNLNWLTMESSQLIGTIPPLIGET--PNLQLL 261
S ++K++ + + RI S I G + + L LT+E+ ++ GT PP + E P+L +L
Sbjct: 67 SLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNIL 126
Query: 262 NI 263
N+
Sbjct: 127 NL 128
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.135 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,835,082
Number of Sequences: 62578
Number of extensions: 718245
Number of successful extensions: 3029
Number of sequences better than 100.0: 982
Number of HSP's better than 100.0 without gapping: 503
Number of HSP's successfully gapped in prelim test: 479
Number of HSP's that attempted gapping in prelim test: 2093
Number of HSP's gapped (non-prelim): 1140
length of query: 746
length of database: 14,973,337
effective HSP length: 106
effective length of query: 640
effective length of database: 8,340,069
effective search space: 5337644160
effective search space used: 5337644160
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)