Query 041467
Match_columns 746
No_of_seqs 801 out of 5521
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 12:21:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041467.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041467hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 7.8E-50 2.7E-54 472.9 26.8 387 18-416 294-751 (768)
2 3rgz_A Protein brassinosteroid 100.0 2.1E-46 7.3E-51 443.4 25.9 387 14-405 219-720 (768)
3 3omv_A RAF proto-oncogene seri 100.0 1.8E-45 6.1E-50 381.9 7.9 231 478-718 34-296 (307)
4 4aw0_A HPDK1, 3-phosphoinositi 100.0 4.3E-45 1.5E-49 378.0 9.3 178 479-668 31-225 (311)
5 4fih_A Serine/threonine-protei 100.0 3.3E-45 1.1E-49 384.6 7.8 176 479-668 73-261 (346)
6 4asz_A BDNF/NT-3 growth factor 100.0 7.8E-46 2.7E-50 384.8 2.6 230 480-721 13-288 (299)
7 4aoj_A High affinity nerve gro 100.0 3.5E-45 1.2E-49 385.2 6.0 229 480-720 41-317 (329)
8 4b9d_A Serine/threonine-protei 100.0 6E-45 2E-49 383.2 5.2 177 478-668 22-216 (350)
9 4gt4_A Tyrosine-protein kinase 100.0 1.9E-44 6.5E-49 376.0 6.8 227 481-719 27-303 (308)
10 4eco_A Uncharacterized protein 100.0 2.8E-42 9.7E-47 399.0 24.7 375 10-402 73-601 (636)
11 3hyh_A Carbon catabolite-derep 100.0 3.4E-44 1.2E-48 366.3 7.6 175 479-668 12-203 (275)
12 3t6q_A CD180 antigen; protein- 100.0 4.5E-41 1.5E-45 388.5 34.5 378 19-399 34-511 (606)
13 3t6q_A CD180 antigen; protein- 100.0 2.3E-41 8E-46 390.8 31.0 386 3-398 42-533 (606)
14 4fie_A Serine/threonine-protei 100.0 1.5E-43 5.1E-48 381.1 10.8 176 479-668 150-338 (423)
15 3ubd_A Ribosomal protein S6 ki 100.0 2.3E-44 7.7E-49 372.7 2.2 175 480-668 24-217 (304)
16 4g3f_A NF-kappa-beta-inducing 100.0 2.4E-43 8.3E-48 369.3 8.4 177 478-668 56-247 (336)
17 4eco_A Uncharacterized protein 100.0 7.6E-42 2.6E-46 395.4 20.8 337 29-380 194-602 (636)
18 3fpq_A Serine/threonine-protei 100.0 1.2E-42 4E-47 358.1 10.7 171 483-668 29-220 (290)
19 3j0a_A TOLL-like receptor 5; m 100.0 4.1E-41 1.4E-45 402.3 25.2 394 5-403 35-562 (844)
20 3hmm_A TGF-beta receptor type- 100.0 6.9E-43 2.4E-47 365.1 7.4 236 480-720 3-295 (303)
21 3vq2_A TLR4, TOLL-like recepto 100.0 2E-40 6.9E-45 383.0 27.6 392 6-403 44-560 (606)
22 4g31_A Eukaryotic translation 100.0 9.5E-43 3.2E-47 362.2 6.6 184 479-668 4-221 (299)
23 1ziw_A TOLL-like receptor 3; i 100.0 2E-39 6.7E-44 379.8 34.7 386 6-399 37-515 (680)
24 4ase_A Vascular endothelial gr 100.0 5.9E-43 2E-47 371.1 4.1 238 471-720 55-345 (353)
25 4ecn_A Leucine-rich repeat pro 100.0 1.9E-40 6.6E-45 390.1 25.0 373 10-400 315-839 (876)
26 1ziw_A TOLL-like receptor 3; i 100.0 1.9E-39 6.4E-44 380.0 32.5 394 4-398 59-594 (680)
27 4ecn_A Leucine-rich repeat pro 100.0 3.8E-40 1.3E-44 387.6 22.5 333 34-382 440-844 (876)
28 3j0a_A TOLL-like receptor 5; m 100.0 3.6E-39 1.2E-43 385.5 29.6 385 3-399 13-537 (844)
29 3vq2_A TLR4, TOLL-like recepto 100.0 9.2E-39 3.2E-43 369.1 29.1 376 3-383 65-563 (606)
30 2z81_A CD282 antigen, TOLL-lik 100.0 6.3E-39 2.2E-43 365.9 26.0 380 3-403 14-512 (549)
31 4b99_A Mitogen-activated prote 100.0 1E-40 3.5E-45 360.2 10.0 180 479-668 53-254 (398)
32 2z63_A TOLL-like receptor 4, v 100.0 1.9E-38 6.4E-43 363.7 27.5 379 18-401 28-531 (570)
33 3v47_A TOLL-like receptor 5B a 100.0 4.7E-38 1.6E-42 350.0 26.2 350 18-383 30-413 (455)
34 2z7x_B TOLL-like receptor 1, v 100.0 8.9E-38 3E-42 353.9 27.8 369 2-402 8-482 (520)
35 4f9c_A Cell division cycle 7-r 100.0 1.3E-39 4.5E-44 347.9 9.4 186 476-668 17-238 (361)
36 3v5w_A G-protein coupled recep 100.0 5.3E-39 1.8E-43 360.8 12.3 213 478-706 187-438 (689)
37 2z81_A CD282 antigen, TOLL-lik 100.0 7.6E-38 2.6E-42 357.0 21.6 367 3-382 35-514 (549)
38 2z63_A TOLL-like receptor 4, v 100.0 3.8E-37 1.3E-41 352.9 25.8 370 3-384 37-537 (570)
39 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 2.3E-36 7.8E-41 345.4 28.2 372 3-402 40-511 (562)
40 2z7x_B TOLL-like receptor 1, v 100.0 9.3E-37 3.2E-41 345.6 20.2 348 3-382 30-485 (520)
41 3uto_A Twitchin; kinase, muscl 100.0 5.8E-38 2E-42 355.4 9.9 175 479-668 156-347 (573)
42 3v47_A TOLL-like receptor 5B a 100.0 3.8E-36 1.3E-40 334.7 23.2 334 3-343 39-412 (455)
43 4g8a_A TOLL-like receptor 4; l 100.0 4.1E-35 1.4E-39 340.3 29.3 383 18-403 52-582 (635)
44 2id5_A Lingo-1, leucine rich r 100.0 1.9E-35 6.5E-40 331.0 23.3 75 21-98 14-88 (477)
45 2id5_A Lingo-1, leucine rich r 100.0 1.1E-34 3.9E-39 324.7 26.4 307 4-342 21-336 (477)
46 1jl5_A Outer protein YOPM; leu 100.0 5.8E-35 2E-39 323.3 23.1 273 12-315 5-291 (454)
47 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 6.4E-35 2.2E-39 333.4 22.8 352 3-383 61-515 (562)
48 3bz5_A Internalin-J, INLJ; leu 100.0 3.6E-34 1.2E-38 317.2 26.1 331 15-383 39-392 (457)
49 3fe3_A MAP/microtubule affinit 100.0 3.3E-36 1.1E-40 319.1 8.7 178 477-668 12-205 (328)
50 1o6v_A Internalin A; bacterial 100.0 1.2E-33 4.2E-38 315.1 28.5 336 17-399 45-386 (466)
51 4g8a_A TOLL-like receptor 4; l 100.0 1.4E-33 4.6E-38 327.4 29.9 376 2-380 60-582 (635)
52 3oja_B Anopheles plasmodium-re 100.0 4.2E-34 1.5E-38 328.6 25.2 335 16-413 49-392 (597)
53 3o6n_A APL1; leucine-rich repe 100.0 5.6E-34 1.9E-38 310.4 24.3 325 16-403 43-376 (390)
54 1o6v_A Internalin A; bacterial 100.0 2E-33 6.8E-38 313.4 29.2 321 14-380 64-390 (466)
55 1o6l_A RAC-beta serine/threoni 100.0 4.4E-35 1.5E-39 311.4 13.5 214 479-706 4-249 (337)
56 4fr4_A YANK1, serine/threonine 100.0 3.9E-35 1.3E-39 316.5 13.0 178 479-668 14-208 (384)
57 3fxz_A Serine/threonine-protei 100.0 3.5E-35 1.2E-39 307.4 11.7 177 478-668 18-207 (297)
58 3zgw_A Maternal embryonic leuc 100.0 6.1E-36 2.1E-40 318.9 5.7 181 476-668 6-201 (347)
59 3s95_A LIMK-1, LIM domain kina 100.0 1.6E-35 5.6E-40 312.0 8.2 184 479-668 9-213 (310)
60 3txo_A PKC-L, NPKC-ETA, protei 100.0 1.8E-35 6.3E-40 316.4 7.8 215 478-706 21-268 (353)
61 3h4j_B AMPK kdaid, SNF1-like p 100.0 5.9E-35 2E-39 310.1 11.3 220 479-713 8-256 (336)
62 3p86_A Serine/threonine-protei 100.0 1.7E-35 5.8E-40 311.4 5.2 234 473-720 30-296 (309)
63 1fot_A TPK1 delta, CAMP-depend 100.0 1.2E-34 4E-39 305.9 11.0 211 479-706 5-247 (318)
64 3uim_A Brassinosteroid insensi 100.0 8.7E-35 3E-39 308.8 9.4 194 465-668 15-226 (326)
65 1xjd_A Protein kinase C, theta 100.0 8E-35 2.7E-39 310.3 9.1 216 477-706 14-262 (345)
66 3bz5_A Internalin-J, INLJ; leu 100.0 4.3E-33 1.5E-37 308.5 23.3 292 20-340 20-332 (457)
67 1jl5_A Outer protein YOPM; leu 100.0 2.8E-33 9.4E-38 309.8 21.1 333 3-383 20-377 (454)
68 2c30_A Serine/threonine-protei 100.0 2.2E-34 7.4E-39 304.8 11.7 187 468-668 23-232 (321)
69 3ttj_A Mitogen-activated prote 100.0 7.8E-35 2.7E-39 323.2 7.8 176 478-668 60-254 (464)
70 4dc2_A Protein kinase C IOTA t 100.0 1E-34 3.5E-39 314.3 8.5 177 478-668 50-244 (396)
71 2vd5_A DMPK protein; serine/th 100.0 9.7E-35 3.3E-39 316.4 8.3 187 472-668 53-261 (412)
72 2qkw_B Protein kinase; three-h 100.0 1.2E-34 4.1E-39 307.0 8.8 187 470-668 29-232 (321)
73 2i0e_A Protein kinase C-beta I 100.0 1.8E-34 6E-39 308.6 10.0 215 478-706 18-265 (353)
74 3kul_A Ephrin type-A receptor 100.0 6.7E-35 2.3E-39 309.3 6.3 232 479-721 48-312 (325)
75 4aw2_A Serine/threonine-protei 100.0 1.9E-34 6.5E-39 316.3 10.0 187 472-668 66-272 (437)
76 4fmz_A Internalin; leucine ric 100.0 7.3E-32 2.5E-36 288.9 29.9 300 15-378 41-346 (347)
77 1rdq_E PKA C-alpha, CAMP-depen 100.0 2.1E-34 7.1E-39 308.0 9.9 211 479-706 40-282 (350)
78 2psq_A Fibroblast growth facto 100.0 1.7E-34 5.7E-39 311.7 9.1 230 478-719 79-361 (370)
79 2zv2_A Calcium/calmodulin-depe 100.0 2.5E-34 8.7E-39 301.1 10.1 179 479-668 12-231 (298)
80 1ogq_A PGIP-2, polygalacturona 100.0 3.5E-33 1.2E-37 294.2 18.4 249 18-337 50-302 (313)
81 3a8x_A Protein kinase C IOTA t 100.0 3.2E-34 1.1E-38 306.1 10.2 176 479-668 8-201 (345)
82 3lb7_A RAF proto-oncogene seri 100.0 3.1E-34 1E-38 301.6 9.8 232 478-719 34-297 (307)
83 4eqm_A Protein kinase; transfe 100.0 2E-34 6.8E-39 301.2 8.2 177 479-668 10-203 (294)
84 1tki_A Titin; serine kinase, m 100.0 2.4E-34 8.2E-39 304.3 8.8 174 479-668 4-194 (321)
85 3v8s_A RHO-associated protein 100.0 1.5E-34 5.1E-39 314.7 7.3 186 473-668 62-264 (410)
86 3tki_A Serine/threonine-protei 100.0 1.9E-34 6.5E-39 305.4 7.5 179 479-668 6-199 (323)
87 3o6n_A APL1; leucine-rich repe 100.0 3E-32 1E-36 296.7 24.8 294 4-341 55-354 (390)
88 3soa_A Calcium/calmodulin-depe 100.0 6.3E-34 2.2E-38 313.3 11.6 178 477-668 8-204 (444)
89 2qol_A Ephrin receptor; recept 100.0 1.9E-34 6.4E-39 311.5 7.1 230 479-719 44-306 (373)
90 2bdw_A Hypothetical protein K1 100.0 5.9E-34 2E-38 306.3 10.7 176 478-668 27-221 (362)
91 4fvq_A Tyrosine-protein kinase 100.0 1.2E-34 4E-39 302.2 5.0 225 479-724 7-277 (289)
92 3c0i_A Peripheral plasma membr 100.0 6.9E-34 2.4E-38 304.8 11.0 176 479-668 23-224 (351)
93 3oja_B Anopheles plasmodium-re 100.0 2.8E-32 9.6E-37 313.4 25.2 296 4-343 61-362 (597)
94 3o0g_A Cell division protein k 100.0 3.2E-34 1.1E-38 299.4 8.1 176 480-668 2-193 (292)
95 2y94_A 5'-AMP-activated protei 100.0 4.6E-34 1.6E-38 316.4 9.6 176 479-668 15-207 (476)
96 2yab_A Death-associated protei 100.0 6.1E-34 2.1E-38 305.4 10.2 176 478-668 10-209 (361)
97 2r5t_A Serine/threonine-protei 100.0 2.8E-34 9.7E-39 309.2 7.5 215 478-706 36-283 (373)
98 3a62_A Ribosomal protein S6 ki 100.0 3E-34 1E-38 304.5 7.4 214 479-706 16-265 (327)
99 1kob_A Twitchin; kinase, intra 100.0 5.7E-34 1.9E-38 308.4 9.3 175 479-668 50-241 (387)
100 4ejn_A RAC-alpha serine/threon 100.0 2.4E-34 8E-39 318.8 6.3 215 478-706 146-393 (446)
101 3niz_A Rhodanese family protei 100.0 1E-33 3.4E-38 298.3 10.5 179 477-668 18-211 (311)
102 3rp9_A Mitogen-activated prote 100.0 5.6E-34 1.9E-38 317.1 8.6 185 478-669 51-276 (458)
103 3soc_A Activin receptor type-2 100.0 2E-34 6.7E-39 305.4 4.6 185 477-668 21-229 (322)
104 2x4f_A Myosin light chain kina 100.0 6E-34 2.1E-38 307.4 8.3 171 483-668 92-279 (373)
105 3ugc_A Tyrosine-protein kinase 100.0 2E-34 6.9E-39 301.3 4.2 179 479-668 9-208 (295)
106 3cbl_A C-FES, proto-oncogene t 100.0 2E-34 6.9E-39 312.1 4.1 230 477-718 111-370 (377)
107 3oz6_A Mitogen-activated prote 100.0 5.6E-34 1.9E-38 310.1 7.6 185 477-668 6-222 (388)
108 3sxs_A Cytoplasmic tyrosine-pr 100.0 1.1E-33 3.8E-38 291.4 9.2 231 478-722 6-264 (268)
109 3dls_A PAS domain-containing s 100.0 2.5E-34 8.5E-39 306.0 4.3 177 478-668 22-221 (335)
110 2y0a_A Death-associated protei 100.0 1.1E-33 3.9E-38 299.9 9.3 175 479-668 10-208 (326)
111 3qd2_B Eukaryotic translation 100.0 6.9E-34 2.4E-38 302.4 7.6 185 478-668 4-267 (332)
112 2nru_A Interleukin-1 receptor- 100.0 2.4E-33 8.3E-38 294.9 11.1 190 466-668 11-225 (307)
113 3c4z_A Rhodopsin kinase; Ser/T 100.0 1.7E-33 5.9E-38 315.4 10.3 176 479-668 184-380 (543)
114 3n9x_A Phosphotransferase; mal 100.0 8.5E-34 2.9E-38 312.7 7.7 184 478-668 24-243 (432)
115 3l9p_A Anaplastic lymphoma kin 100.0 3.5E-34 1.2E-38 308.9 4.1 229 479-719 70-342 (367)
116 2acx_A G protein-coupled recep 100.0 1.5E-33 5.1E-38 316.5 9.2 176 478-668 182-376 (576)
117 3gxj_A TGF-beta receptor type- 100.0 3.7E-34 1.3E-38 300.4 4.0 235 479-723 2-298 (303)
118 1luf_A Muscle-specific tyrosin 100.0 6.9E-34 2.3E-38 304.0 6.1 238 475-724 42-337 (343)
119 3uc3_A Serine/threonine-protei 100.0 6.2E-34 2.1E-38 306.1 5.6 176 478-668 18-209 (361)
120 4hcu_A Tyrosine-protein kinase 100.0 6E-34 2.1E-38 293.5 5.3 176 479-668 9-198 (269)
121 3fdn_A Serine/threonine-protei 100.0 2.1E-33 7E-38 291.2 9.3 175 478-668 7-198 (279)
122 1qcf_A Haematopoetic cell kina 100.0 9.2E-34 3.1E-38 314.5 7.0 234 475-723 183-445 (454)
123 1u5q_A Serine/threonine protei 100.0 1.4E-33 4.9E-38 301.6 8.1 174 479-668 53-244 (348)
124 3poz_A Epidermal growth factor 100.0 8E-34 2.7E-38 301.4 6.0 227 479-718 14-274 (327)
125 2eue_A Carbon catabolite derep 100.0 1.3E-33 4.4E-38 292.1 7.1 175 479-668 12-203 (275)
126 3ork_A Serine/threonine protei 100.0 9.8E-34 3.3E-38 298.5 6.4 179 479-668 11-210 (311)
127 3q4u_A Activin receptor type-1 100.0 8.2E-34 2.8E-38 297.5 5.7 181 478-668 6-214 (301)
128 3vhe_A Vascular endothelial gr 100.0 7.1E-34 2.4E-38 306.0 5.3 187 470-668 12-286 (359)
129 1ogq_A PGIP-2, polygalacturona 100.0 1.4E-32 4.7E-37 289.6 15.0 251 130-404 51-307 (313)
130 1ob3_A PFPK5, cell division co 100.0 2.6E-33 8.8E-38 291.9 9.1 175 480-668 2-192 (288)
131 3f3z_A Calcium/calmodulin-depe 100.0 2.7E-33 9.1E-38 290.0 9.1 175 478-668 7-198 (277)
132 3p1a_A MYT1 kinase, membrane-a 100.0 1.7E-33 5.8E-38 296.6 7.6 172 480-668 57-246 (311)
133 3e7e_A HBUB1, BUB1A, mitotic c 100.0 7.9E-34 2.7E-38 306.3 5.2 178 476-668 61-276 (365)
134 3tt0_A Basic fibroblast growth 100.0 1.9E-33 6.4E-38 305.1 8.1 231 478-720 67-350 (382)
135 2w4o_A Calcium/calmodulin-depe 100.0 1.5E-33 5E-38 301.9 7.2 220 478-714 51-304 (349)
136 3kmu_A ILK, integrin-linked ki 100.0 8.3E-34 2.8E-38 292.6 4.8 225 479-719 9-267 (271)
137 3og7_A AKAP9-BRAF fusion prote 100.0 1.4E-33 4.8E-38 294.0 6.5 182 477-668 21-216 (289)
138 3qup_A Tyrosine-protein kinase 100.0 1.2E-33 4.3E-38 299.4 6.0 231 476-718 19-294 (323)
139 3dtc_A Mitogen-activated prote 100.0 1.4E-33 4.9E-38 291.0 6.1 177 479-668 6-205 (271)
140 2pmi_A Negative RE, cyclin-dep 100.0 2.9E-33 9.9E-38 295.7 8.6 177 478-668 3-200 (317)
141 3gni_B Strad alpha; kinase fol 100.0 5.7E-33 1.9E-37 302.3 11.0 184 478-668 23-228 (389)
142 4euu_A Serine/threonine-protei 100.0 3.8E-33 1.3E-37 295.2 9.3 175 479-668 8-214 (319)
143 1opk_A P150, C-ABL, proto-onco 100.0 1.8E-33 6.2E-38 315.2 6.8 231 478-722 218-478 (495)
144 1cm8_A Phosphorylated MAP kina 100.0 3.3E-33 1.1E-37 301.2 8.4 173 478-668 23-217 (367)
145 2owb_A Serine/threonine-protei 100.0 6E-33 2.1E-37 295.6 10.4 177 478-668 39-232 (335)
146 2ivs_A Proto-oncogene tyrosine 100.0 1.7E-33 5.9E-38 297.0 6.1 180 477-668 20-243 (314)
147 1mp8_A Focal adhesion kinase 1 100.0 1.2E-33 4.2E-38 293.2 4.8 178 477-668 12-208 (281)
148 3cok_A Serine/threonine-protei 100.0 5.3E-33 1.8E-37 287.9 9.6 177 478-668 9-203 (278)
149 4fmz_A Internalin; leucine ric 100.0 9.4E-31 3.2E-35 280.2 27.4 279 14-339 62-346 (347)
150 2ft3_A Biglycan; proteoglycan, 100.0 2.9E-31 9.9E-36 282.3 23.1 280 18-352 33-322 (332)
151 1k9a_A Carboxyl-terminal SRC k 100.0 2.2E-33 7.4E-38 311.0 6.7 224 477-719 190-442 (450)
152 3pfq_A PKC-B, PKC-beta, protei 100.0 4.9E-33 1.7E-37 322.0 9.9 215 478-706 339-586 (674)
153 3c1x_A Hepatocyte growth facto 100.0 1.2E-33 4.1E-38 304.8 4.3 231 480-720 89-353 (373)
154 2rku_A Serine/threonine-protei 100.0 8.2E-33 2.8E-37 289.0 10.5 177 478-668 13-206 (294)
155 3kk8_A Calcium/calmodulin depe 100.0 1.5E-32 5.1E-37 285.4 12.0 176 478-668 4-198 (284)
156 3g33_A Cell division protein k 100.0 8E-33 2.7E-37 291.1 9.9 175 478-668 7-210 (308)
157 3gen_A Tyrosine-protein kinase 100.0 2.6E-33 9E-38 291.0 5.9 227 477-717 21-275 (283)
158 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 2.8E-33 9.7E-38 310.3 6.4 233 475-722 179-440 (452)
159 3i6u_A CDS1, serine/threonine- 100.0 4.3E-33 1.5E-37 305.7 7.7 178 478-668 133-335 (419)
160 3llt_A Serine/threonine kinase 100.0 8.8E-33 3E-37 297.6 10.0 182 468-668 23-250 (360)
161 2a2a_A Death-associated protei 100.0 7.1E-33 2.4E-37 293.3 9.1 176 478-668 10-209 (321)
162 3op5_A Serine/threonine-protei 100.0 2.1E-33 7.3E-38 302.7 5.1 183 478-668 33-252 (364)
163 3hko_A Calcium/calmodulin-depe 100.0 7.4E-33 2.5E-37 296.3 9.2 185 474-668 20-267 (345)
164 1p4o_A Insulin-like growth fac 100.0 4.5E-33 1.5E-37 295.0 7.4 241 470-722 15-299 (322)
165 2izr_A Casein kinase I isoform 100.0 1E-33 3.5E-38 301.0 2.2 180 479-668 8-208 (330)
166 3kn6_A Ribosomal protein S6 ki 100.0 2.5E-32 8.5E-37 289.4 12.6 167 485-668 16-200 (325)
167 2vgo_A Serine/threonine-protei 100.0 1.1E-32 3.8E-37 286.5 9.7 174 479-668 13-203 (284)
168 1ua2_A CAK, cell division prot 100.0 4.3E-33 1.5E-37 298.2 6.4 178 477-668 7-204 (346)
169 2xrw_A Mitogen-activated prote 100.0 6.3E-33 2.2E-37 299.7 7.4 176 478-668 23-217 (371)
170 1rjb_A FL cytokine receptor; k 100.0 4.8E-33 1.7E-37 297.6 6.3 235 476-722 41-334 (344)
171 1xku_A Decorin; proteoglycan, 100.0 3.3E-30 1.1E-34 273.9 28.1 268 18-339 31-306 (330)
172 2yex_A Serine/threonine-protei 100.0 1.2E-32 4E-37 284.9 8.9 179 479-668 6-199 (276)
173 3g2f_A Bone morphogenetic prot 100.0 3.4E-33 1.2E-37 297.8 4.9 190 478-668 11-226 (336)
174 4f0f_A Serine/threonine-protei 100.0 5.6E-33 1.9E-37 289.1 6.4 223 479-718 18-285 (287)
175 2eva_A TAK1 kinase - TAB1 chim 100.0 4.1E-33 1.4E-37 293.1 5.4 222 479-718 7-259 (307)
176 3f66_A Hepatocyte growth facto 100.0 4.3E-33 1.5E-37 291.7 5.5 232 478-719 23-288 (298)
177 2buj_A Serine/threonine-protei 100.0 5.2E-33 1.8E-37 293.8 6.1 244 478-724 27-308 (317)
178 1mqb_A Ephrin type-A receptor 100.0 7.3E-33 2.5E-37 294.7 6.9 230 480-720 44-307 (333)
179 3mi9_A Cell division protein k 100.0 5.5E-33 1.9E-37 298.1 5.7 182 478-668 15-220 (351)
180 3byv_A Rhoptry kinase; malaria 100.0 2.7E-33 9.2E-38 303.4 3.2 172 478-668 71-304 (377)
181 1nxk_A MAP kinase-activated pr 100.0 1.2E-32 4E-37 300.2 8.2 170 479-668 60-254 (400)
182 2fst_X Mitogen-activated prote 100.0 8.7E-33 3E-37 297.6 7.1 173 478-668 27-221 (367)
183 3kex_A Receptor tyrosine-prote 100.0 8.9E-33 3E-37 293.1 7.0 177 479-668 12-208 (325)
184 4e5w_A Tyrosine-protein kinase 100.0 1E-32 3.6E-37 289.3 7.3 178 480-668 21-220 (302)
185 3lxl_A Tyrosine-protein kinase 100.0 6.7E-33 2.3E-37 294.3 5.8 179 479-668 22-221 (327)
186 1t46_A HOMO sapiens V-KIT hard 100.0 4.3E-33 1.5E-37 293.8 4.1 231 477-719 20-304 (313)
187 4e7w_A Glycogen synthase kinas 100.0 4.3E-33 1.5E-37 303.2 4.3 172 479-668 39-233 (394)
188 1x8b_A WEE1HU, WEE1-like prote 100.0 1.4E-32 4.9E-37 285.9 7.9 174 478-668 9-222 (289)
189 3pls_A Macrophage-stimulating 100.0 1E-32 3.5E-37 288.7 6.8 229 481-719 22-284 (298)
190 3mwu_A Calmodulin-domain prote 100.0 2.5E-32 8.5E-37 306.0 10.3 175 478-668 20-213 (486)
191 2j7t_A Serine/threonine-protei 100.0 2.4E-33 8.3E-38 294.1 1.9 180 478-668 17-213 (302)
192 3kvw_A DYRK2, dual specificity 100.0 1.5E-32 5E-37 302.3 7.8 172 478-668 95-290 (429)
193 2qr7_A Ribosomal protein S6 ki 100.0 8.4E-33 2.9E-37 294.7 5.6 173 478-668 20-211 (342)
194 3lzb_A Epidermal growth factor 100.0 5.8E-33 2E-37 294.6 4.3 229 479-720 14-276 (327)
195 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1.1E-32 3.7E-37 292.9 6.4 179 476-668 30-229 (329)
196 2h8h_A Proto-oncogene tyrosine 100.0 7.4E-33 2.5E-37 313.1 5.4 235 474-723 261-524 (535)
197 1j1b_A Glycogen synthase kinas 100.0 6.3E-33 2.2E-37 304.5 4.6 171 479-668 53-248 (420)
198 2h6d_A 5'-AMP-activated protei 100.0 2E-32 6.7E-37 283.3 8.0 176 479-668 10-202 (276)
199 3mtl_A Cell division protein k 100.0 9.3E-33 3.2E-37 292.8 5.5 175 480-668 2-192 (324)
200 2ac3_A MAP kinase-interacting 100.0 1.5E-32 5.2E-37 290.1 7.1 183 479-668 11-217 (316)
201 3eb0_A Putative uncharacterize 100.0 1.5E-32 5.1E-37 298.2 7.2 173 477-668 4-233 (383)
202 3dbq_A Dual specificity protei 100.0 1.5E-32 5.3E-37 293.5 7.2 179 479-668 8-211 (343)
203 4agu_A Cyclin-dependent kinase 100.0 4.2E-32 1.5E-36 286.0 10.2 177 479-668 2-194 (311)
204 2pvf_A Fibroblast growth facto 100.0 2.1E-32 7.3E-37 291.4 8.0 231 478-720 33-316 (334)
205 3nyv_A Calmodulin-domain prote 100.0 1.8E-32 6E-37 307.3 7.7 175 478-668 24-218 (484)
206 3lxp_A Non-receptor tyrosine-p 100.0 2.1E-32 7.3E-37 289.2 7.9 176 482-668 33-228 (318)
207 3lij_A Calcium/calmodulin depe 100.0 3.6E-32 1.2E-36 305.2 10.1 175 478-668 35-228 (494)
208 2v62_A Serine/threonine-protei 100.0 1.4E-32 4.7E-37 294.1 6.5 236 479-722 36-328 (345)
209 1vzo_A Ribosomal protein S6 ki 100.0 5.7E-33 2E-37 298.1 3.4 179 479-668 53-253 (355)
210 3t9t_A Tyrosine-protein kinase 100.0 1.2E-32 4E-37 283.4 5.6 176 479-668 7-196 (267)
211 2wqm_A Serine/threonine-protei 100.0 6.5E-33 2.2E-37 292.1 3.6 230 478-721 30-296 (310)
212 3brb_A Proto-oncogene tyrosine 100.0 1.2E-32 4.1E-37 290.5 5.6 233 475-719 29-305 (313)
213 1csn_A Casein kinase-1; phosph 100.0 1.4E-32 4.9E-37 287.6 6.1 180 479-668 9-209 (298)
214 3bhy_A Death-associated protei 100.0 3.2E-32 1.1E-36 282.8 8.5 175 479-668 4-202 (283)
215 3kfa_A Tyrosine-protein kinase 100.0 5.9E-33 2E-37 289.1 3.0 178 477-668 10-203 (288)
216 3cc6_A Protein tyrosine kinase 100.0 1.5E-32 5.1E-37 285.0 6.0 177 478-668 10-205 (281)
217 3mdy_A Bone morphogenetic prot 100.0 3.3E-32 1.1E-36 290.2 8.7 186 476-668 33-243 (337)
218 2h34_A Serine/threonine-protei 100.0 8.4E-32 2.9E-36 283.4 11.6 178 478-668 32-226 (309)
219 2zmd_A Dual specificity protei 100.0 2.7E-32 9.3E-37 296.4 8.1 178 480-668 56-258 (390)
220 2wtk_C Serine/threonine-protei 100.0 6.4E-32 2.2E-36 283.7 10.5 181 478-668 3-204 (305)
221 2i1m_A Macrophage colony-stimu 100.0 1E-32 3.4E-37 293.8 4.4 183 474-668 40-257 (333)
222 3a7i_A MST3 kinase, serine/thr 100.0 3.5E-32 1.2E-36 285.5 8.3 177 478-668 20-210 (303)
223 3nsz_A CK II alpha, casein kin 100.0 5.6E-32 1.9E-36 287.6 9.5 172 479-668 35-222 (330)
224 3is5_A Calcium-dependent prote 100.0 6.4E-32 2.2E-36 280.9 9.7 174 479-668 21-216 (285)
225 4eut_A Serine/threonine-protei 100.0 1.5E-32 5.2E-37 299.4 5.2 175 479-668 8-214 (396)
226 2jam_A Calcium/calmodulin-depe 100.0 4.4E-32 1.5E-36 284.9 8.5 175 478-668 7-198 (304)
227 3q5i_A Protein kinase; CDPK, m 100.0 7.7E-32 2.6E-36 303.3 11.0 175 478-668 34-238 (504)
228 2y7j_A Phosphorylase B kinase 100.0 1.1E-31 3.6E-36 289.2 11.3 182 475-668 89-296 (365)
229 1xbb_A Tyrosine-protein kinase 100.0 1.9E-32 6.3E-37 285.9 5.1 234 474-719 10-276 (291)
230 2xir_A Vascular endothelial gr 100.0 1.6E-32 5.3E-37 289.9 4.4 187 470-668 17-241 (316)
231 1xku_A Decorin; proteoglycan, 100.0 1.2E-29 4.1E-34 269.5 26.7 224 18-275 52-282 (330)
232 3eqc_A Dual specificity mitoge 100.0 5.1E-32 1.7E-36 291.6 8.3 175 479-668 32-221 (360)
233 3qyz_A Mitogen-activated prote 100.0 6E-32 2.1E-36 291.4 8.7 183 475-668 22-223 (364)
234 4aaa_A Cyclin-dependent kinase 100.0 3.5E-32 1.2E-36 289.3 6.6 177 478-668 23-216 (331)
235 2ozo_A Tyrosine-protein kinase 100.0 3.1E-32 1.1E-36 312.4 6.8 221 487-719 343-595 (613)
236 2w5a_A Serine/threonine-protei 100.0 1.8E-32 6E-37 284.1 4.2 176 479-668 5-207 (279)
237 2ycf_A Serine/threonine-protei 100.0 4.9E-32 1.7E-36 287.0 7.7 178 478-668 8-210 (322)
238 2clq_A Mitogen-activated prote 100.0 6E-32 2E-36 282.5 8.3 223 480-714 22-277 (295)
239 2w1i_A JAK2; chromosomal rearr 100.0 3.5E-32 1.2E-36 288.7 6.6 179 479-668 40-239 (326)
240 1u59_A Tyrosine-protein kinase 100.0 4.2E-32 1.4E-36 282.6 6.9 229 479-719 8-269 (287)
241 2a19_B Interferon-induced, dou 100.0 1.5E-32 5.2E-37 285.2 3.5 171 479-668 10-212 (284)
242 1t4h_A Serine/threonine-protei 100.0 1.6E-31 5.6E-36 278.5 11.3 172 480-668 26-220 (290)
243 1qpc_A LCK kinase; alpha beta 100.0 2.8E-32 9.7E-37 282.6 5.5 230 475-719 8-266 (279)
244 4exu_A Mitogen-activated prote 100.0 7.6E-32 2.6E-36 291.3 8.8 173 478-668 40-233 (371)
245 1fvr_A Tyrosine-protein kinase 100.0 2.8E-32 9.7E-37 289.5 5.1 227 479-720 24-298 (327)
246 3pg1_A Mitogen-activated prote 100.0 7.6E-32 2.6E-36 290.5 8.3 182 472-668 14-225 (362)
247 4fl3_A Tyrosine-protein kinase 100.0 3.5E-32 1.2E-36 312.8 5.9 221 486-718 375-627 (635)
248 3lm5_A Serine/threonine-protei 100.0 6.8E-32 2.3E-36 286.5 7.8 181 473-668 21-224 (327)
249 4hgt_A Casein kinase I isoform 100.0 3.6E-32 1.2E-36 284.2 4.8 181 478-668 7-206 (296)
250 1u46_A ACK-1, activated CDC42 100.0 3.2E-32 1.1E-36 283.9 4.3 231 479-721 17-283 (291)
251 2b9h_A MAP kinase FUS3, mitoge 100.0 1.8E-31 6.1E-36 286.5 10.0 184 478-668 9-214 (353)
252 2ft3_A Biglycan; proteoglycan, 100.0 1.2E-29 4E-34 269.9 23.9 274 4-312 43-331 (332)
253 1byg_A CSK, protein (C-termina 100.0 3.6E-32 1.2E-36 281.6 4.3 172 478-668 19-205 (278)
254 1b6c_B TGF-B superfamily recep 100.0 7.3E-32 2.5E-36 288.2 6.7 182 477-668 39-248 (342)
255 2yfx_A Tyrosine-protein kinase 100.0 4.9E-32 1.7E-36 287.7 4.9 229 478-718 28-300 (327)
256 1zy4_A Serine/threonine-protei 100.0 7.2E-32 2.5E-36 282.8 6.1 184 478-668 4-222 (303)
257 3rgf_A Cyclin-dependent kinase 100.0 3.8E-32 1.3E-36 297.3 4.1 177 479-668 19-227 (405)
258 2y4i_B KSR2, HKSR2, kinase sup 100.0 1E-32 3.5E-37 291.8 -0.4 242 473-724 26-304 (319)
259 3ll6_A Cyclin G-associated kin 100.0 1.4E-31 4.9E-36 285.1 8.3 188 477-668 25-244 (337)
260 2r3i_A Cell division protein k 100.0 1.7E-31 5.9E-36 279.6 8.8 176 479-668 2-195 (299)
261 3com_A Serine/threonine-protei 100.0 2.3E-31 7.9E-36 280.7 9.6 175 478-668 27-216 (314)
262 2vwi_A Serine/threonine-protei 100.0 9.8E-32 3.3E-36 281.9 6.1 183 477-668 12-218 (303)
263 3uzp_A CKI-delta, CKID, casein 100.0 7.7E-32 2.6E-36 281.8 5.1 181 478-668 7-206 (296)
264 2pml_X PFPK7, Ser/Thr protein 100.0 1.9E-31 6.5E-36 285.7 8.1 175 479-668 30-243 (348)
265 1wak_A Serine/threonine-protei 100.0 1E-31 3.5E-36 293.2 6.1 173 479-668 36-284 (397)
266 3coi_A Mitogen-activated prote 100.0 2.8E-31 9.4E-36 285.0 9.2 172 479-668 23-215 (353)
267 1phk_A Phosphorylase kinase; g 100.0 4.4E-31 1.5E-35 276.3 10.5 179 478-668 15-220 (298)
268 2i6l_A Mitogen-activated prote 100.0 1.4E-31 4.9E-36 282.9 6.7 178 479-668 10-216 (320)
269 3e3p_A Protein kinase, putativ 100.0 1.1E-31 3.9E-36 288.9 5.6 181 473-668 16-223 (360)
270 3q60_A ROP5B; pseudokinase, tr 100.0 1.9E-31 6.5E-36 288.3 7.2 172 479-668 61-284 (371)
271 2j0j_A Focal adhesion kinase 1 100.0 1.4E-31 4.7E-36 308.9 5.9 231 474-718 384-647 (656)
272 3fme_A Dual specificity mitoge 100.0 3.5E-31 1.2E-35 275.9 8.2 176 478-668 5-204 (290)
273 3an0_A Dual specificity mitoge 100.0 1.9E-31 6.4E-36 284.8 6.2 180 477-668 48-248 (340)
274 2iwi_A Serine/threonine-protei 100.0 8.5E-32 2.9E-36 283.8 3.4 224 476-714 27-282 (312)
275 2x7f_A TRAF2 and NCK-interacti 100.0 1.9E-31 6.4E-36 283.0 6.0 188 469-668 13-225 (326)
276 3a99_A Proto-oncogene serine/t 100.0 8.2E-32 2.8E-36 285.0 2.4 224 476-714 39-292 (320)
277 1z7x_W Ribonuclease inhibitor; 100.0 1E-31 3.5E-36 299.4 3.0 340 18-380 3-413 (461)
278 3p23_A Serine/threonine-protei 100.0 1.2E-31 4E-36 294.8 3.0 179 478-668 22-220 (432)
279 1blx_A Cyclin-dependent kinase 100.0 4E-31 1.4E-35 280.4 6.6 177 476-668 7-210 (326)
280 3sv0_A Casein kinase I-like; t 100.0 4.3E-31 1.5E-35 293.2 6.8 180 479-668 6-204 (483)
281 2jii_A Serine/threonine-protei 100.0 9E-32 3.1E-36 288.7 0.9 177 479-668 41-259 (352)
282 2wei_A Calmodulin-domain prote 100.0 1.2E-30 4.1E-35 271.6 8.8 176 477-668 19-213 (287)
283 1z57_A Dual specificity protei 100.0 6.8E-31 2.3E-35 280.0 7.1 171 479-668 13-225 (339)
284 3aln_A Dual specificity mitoge 100.0 7.9E-31 2.7E-35 278.3 6.7 180 478-668 20-220 (327)
285 2rio_A Serine/threonine-protei 100.0 3.8E-31 1.3E-35 291.6 4.0 177 481-668 16-230 (434)
286 2vx3_A Dual specificity tyrosi 100.0 1.9E-30 6.4E-35 281.6 8.2 176 476-668 50-249 (382)
287 2vuw_A Serine/threonine-protei 100.0 1.6E-31 5.4E-36 284.9 -0.5 169 479-667 19-266 (336)
288 2pzi_A Probable serine/threoni 100.0 1.8E-30 6.3E-35 302.5 8.4 170 479-668 79-267 (681)
289 2eu9_A Dual specificity protei 100.0 2.1E-30 7.1E-35 278.2 8.0 172 479-668 18-230 (355)
290 3cek_A Dual specificity protei 100.0 1.1E-30 3.6E-35 275.5 5.5 188 470-668 18-230 (313)
291 3qa8_A MGC80376 protein; kinas 100.0 3.3E-30 1.1E-34 292.1 9.5 176 478-668 12-214 (676)
292 1q8y_A SR protein kinase; tran 100.0 3.2E-30 1.1E-34 278.9 5.7 172 479-668 18-226 (373)
293 2dyl_A Dual specificity mitoge 100.0 7.1E-30 2.4E-34 269.8 8.0 179 477-668 22-220 (318)
294 3fhr_A MAP kinase-activated pr 100.0 2.7E-30 9.1E-35 275.2 4.6 171 478-668 26-220 (336)
295 2z66_A Variable lymphocyte rec 100.0 3.7E-28 1.3E-32 255.2 20.1 242 21-271 10-263 (306)
296 3o53_A Protein LRIM1, AGAP0063 100.0 2E-29 6.9E-34 266.1 10.4 268 18-343 10-280 (317)
297 2z80_A TOLL-like receptor 2, v 100.0 6.7E-29 2.3E-33 266.4 14.4 284 17-382 30-318 (353)
298 4fcg_A Uncharacterized protein 100.0 2.4E-28 8E-33 258.9 17.5 235 17-269 80-314 (328)
299 2z80_A TOLL-like receptor 2, v 100.0 1.3E-28 4.6E-33 264.0 15.7 273 3-343 40-318 (353)
300 1z7x_W Ribonuclease inhibitor; 100.0 6.9E-31 2.4E-35 292.6 -3.7 352 14-379 24-441 (461)
301 2z66_A Variable lymphocyte rec 100.0 1.2E-27 4.1E-32 251.3 20.8 197 44-269 9-212 (306)
302 3zyi_A Leucine-rich repeat-con 100.0 2.9E-27 9.9E-32 262.5 24.5 240 18-269 54-303 (452)
303 3zyj_A Leucine-rich repeat-con 100.0 3.5E-27 1.2E-31 260.8 24.5 245 13-269 38-292 (440)
304 4fcg_A Uncharacterized protein 100.0 1E-27 3.5E-32 253.9 19.3 232 41-339 80-314 (328)
305 4azs_A Methyltransferase WBDD; 100.0 5.7E-29 2E-33 281.8 8.5 152 499-668 262-429 (569)
306 3g06_A SSPH2 (leucine-rich rep 99.9 9.1E-27 3.1E-31 265.4 26.1 268 18-350 40-308 (622)
307 1ozn_A Reticulon 4 receptor; N 99.9 2E-27 6.7E-32 247.0 17.8 227 20-270 13-239 (285)
308 1wwl_A Monocyte differentiatio 99.9 7.7E-29 2.6E-33 261.0 5.8 223 17-269 42-287 (312)
309 3oja_A Leucine-rich immune mol 99.9 1.4E-27 4.8E-32 266.7 14.4 238 33-327 21-264 (487)
310 3dzo_A Rhoptry kinase domain; 99.9 1.1E-28 3.9E-33 270.0 4.5 175 478-668 76-308 (413)
311 3o53_A Protein LRIM1, AGAP0063 99.9 1.3E-27 4.3E-32 252.3 12.2 240 6-283 22-265 (317)
312 3g06_A SSPH2 (leucine-rich rep 99.9 7.3E-26 2.5E-30 258.0 26.6 261 3-327 49-310 (622)
313 3zyi_A Leucine-rich repeat-con 99.9 3.8E-26 1.3E-30 253.5 23.5 219 18-245 75-303 (452)
314 3zyj_A Leucine-rich repeat-con 99.9 6.5E-26 2.2E-30 250.6 23.1 229 5-245 54-292 (440)
315 1wwl_A Monocyte differentiatio 99.9 2.8E-27 9.7E-32 249.0 10.6 226 20-270 65-310 (312)
316 1ozn_A Reticulon 4 receptor; N 99.9 2.5E-26 8.5E-31 238.6 17.1 234 17-278 31-270 (285)
317 3uqc_A Probable conserved tran 99.9 3E-27 1E-31 245.4 8.9 148 480-668 31-193 (286)
318 3oja_A Leucine-rich immune mol 99.9 1.3E-26 4.3E-31 259.0 14.2 215 17-269 33-250 (487)
319 3m2w_A MAP kinase-activated pr 99.9 3.2E-27 1.1E-31 247.1 7.0 150 478-668 15-189 (299)
320 2z62_A TOLL-like receptor 4, v 99.9 1.1E-24 3.6E-29 225.2 20.5 220 22-271 11-239 (276)
321 2o6q_A Variable lymphocyte rec 99.9 2.3E-24 7.9E-29 221.8 21.8 218 4-270 2-219 (270)
322 2z62_A TOLL-like receptor 4, v 99.9 3.7E-24 1.3E-28 221.1 19.0 221 45-317 10-240 (276)
323 3rfs_A Internalin B, repeat mo 99.9 2.2E-24 7.4E-29 222.2 15.3 201 18-270 19-219 (272)
324 3rfs_A Internalin B, repeat mo 99.9 1.3E-23 4.5E-28 216.3 18.2 210 15-281 38-247 (272)
325 3ogk_B Coronatine-insensitive 99.9 9.4E-26 3.2E-30 259.4 2.3 380 13-399 68-524 (592)
326 3goz_A Leucine-rich repeat-con 99.9 4.7E-25 1.6E-29 237.1 7.3 269 22-322 2-305 (362)
327 1p9a_G Platelet glycoprotein I 99.9 3.9E-23 1.3E-27 214.6 19.6 202 15-269 7-208 (290)
328 1p9a_G Platelet glycoprotein I 99.9 5.2E-23 1.8E-27 213.7 19.6 180 38-269 6-185 (290)
329 3en9_A Glycoprotease, O-sialog 99.9 5E-25 1.7E-29 248.1 4.4 171 483-665 339-526 (540)
330 3goz_A Leucine-rich repeat-con 99.9 1.2E-24 4.1E-29 234.0 5.7 256 3-276 6-304 (362)
331 2o6q_A Variable lymphocyte rec 99.9 2.4E-22 8.1E-27 206.7 21.2 202 111-341 17-220 (270)
332 3ogk_B Coronatine-insensitive 99.9 1.1E-24 3.6E-29 250.6 3.4 339 19-380 139-528 (592)
333 2ca6_A RAN GTPase-activating p 99.9 5.7E-25 1.9E-29 238.8 0.3 272 18-343 9-320 (386)
334 4glp_A Monocyte differentiatio 99.9 5.9E-23 2E-27 215.8 14.3 158 127-314 143-307 (310)
335 4ay9_X Follicle-stimulating ho 99.9 1.1E-22 3.9E-27 217.4 15.7 243 21-312 12-257 (350)
336 4glp_A Monocyte differentiatio 99.9 4.8E-23 1.6E-27 216.5 12.5 228 18-270 64-308 (310)
337 2xwt_C Thyrotropin receptor; s 99.9 1.6E-22 5.4E-27 204.1 14.6 194 23-269 16-218 (239)
338 2xwt_C Thyrotropin receptor; s 99.9 3.5E-22 1.2E-26 201.5 15.1 197 18-266 31-236 (239)
339 2ast_B S-phase kinase-associat 99.9 7.8E-23 2.7E-27 217.5 9.0 218 19-266 48-282 (336)
340 1h6u_A Internalin H; cell adhe 99.9 1.2E-21 4.2E-26 205.3 17.5 207 21-270 22-231 (308)
341 2ca6_A RAN GTPase-activating p 99.9 4.3E-23 1.5E-27 224.0 5.9 237 15-273 29-320 (386)
342 3m19_A Variable lymphocyte rec 99.9 3E-21 1E-25 196.2 18.5 178 111-316 15-194 (251)
343 3m19_A Variable lymphocyte rec 99.9 3.4E-21 1.2E-25 195.8 18.2 181 18-271 14-194 (251)
344 2ast_B S-phase kinase-associat 99.9 2E-22 6.8E-27 214.3 8.0 252 43-348 48-315 (336)
345 1zar_A RIO2 kinase; serine kin 99.9 2.7E-22 9.2E-27 207.0 8.1 144 474-648 84-253 (282)
346 2p1m_B Transport inhibitor res 99.9 6.4E-24 2.2E-28 244.2 -5.4 379 15-399 63-517 (594)
347 1h6u_A Internalin H; cell adhe 99.9 4.4E-21 1.5E-25 201.1 15.3 194 107-344 38-234 (308)
348 2p1m_B Transport inhibitor res 99.9 2.4E-23 8E-28 239.5 -2.3 349 17-377 104-518 (594)
349 3cvr_A Invasion plasmid antige 99.8 9.2E-21 3.1E-25 213.3 16.4 94 129-245 100-193 (571)
350 2o6s_A Variable lymphocyte rec 99.8 5.3E-20 1.8E-24 181.3 18.2 179 113-302 10-190 (208)
351 2o6s_A Variable lymphocyte rec 99.8 4.3E-20 1.5E-24 181.9 15.5 179 20-254 9-187 (208)
352 3cvr_A Invasion plasmid antige 99.8 7E-20 2.4E-24 206.1 16.9 194 111-351 60-255 (571)
353 4ay9_X Follicle-stimulating ho 99.8 8.2E-20 2.8E-24 195.2 15.0 200 113-319 12-219 (350)
354 1m9s_A Internalin B; cell inva 99.8 1.2E-19 4E-24 206.6 13.0 188 17-245 20-210 (605)
355 1dce_A Protein (RAB geranylger 99.8 3.2E-22 1.1E-26 226.4 -8.5 203 40-263 347-567 (567)
356 1h6t_A Internalin B; cell adhe 99.8 5.2E-19 1.8E-23 183.6 14.1 168 107-314 43-213 (291)
357 1h6t_A Internalin B; cell adhe 99.8 1.6E-18 5.4E-23 180.0 16.4 167 17-222 45-214 (291)
358 1dce_A Protein (RAB geranylger 99.8 1.7E-21 5.7E-26 220.5 -8.3 186 63-273 346-550 (567)
359 2v70_A SLIT-2, SLIT homolog 2 99.8 2.2E-18 7.5E-23 171.1 15.2 152 113-271 14-168 (220)
360 1m9s_A Internalin B; cell inva 99.8 2.9E-18 1E-22 195.1 17.9 169 15-222 40-211 (605)
361 2xot_A Amphoterin-induced prot 99.8 2.7E-18 9.3E-23 184.1 15.6 181 132-340 21-203 (361)
362 2v9t_B SLIT homolog 2 protein 99.8 3.5E-18 1.2E-22 169.6 14.9 151 113-270 14-166 (220)
363 2xot_A Amphoterin-induced prot 99.8 2.8E-18 9.6E-23 184.0 13.9 175 113-315 21-203 (361)
364 2v70_A SLIT-2, SLIT homolog 2 99.8 6.5E-18 2.2E-22 167.7 14.7 152 21-221 14-166 (220)
365 1xeu_A Internalin C; cellular 99.7 7.8E-19 2.7E-23 179.4 7.1 82 183-271 106-187 (263)
366 2v9t_B SLIT homolog 2 protein 99.7 1.2E-17 4.1E-22 165.8 14.9 152 132-314 14-165 (220)
367 3e6j_A Variable lymphocyte rec 99.7 1.8E-17 6.1E-22 165.6 15.7 152 112-271 21-174 (229)
368 4b8c_D Glucose-repressible alc 99.7 2.9E-18 1E-22 200.0 10.0 161 133-311 205-369 (727)
369 1xeu_A Internalin C; cellular 99.7 4.3E-18 1.5E-22 173.9 9.6 166 17-222 18-186 (263)
370 4ezg_A Putative uncharacterize 99.7 7.1E-18 2.4E-22 164.4 10.5 130 128-269 43-172 (197)
371 3e6j_A Variable lymphocyte rec 99.7 3.1E-17 1.1E-21 163.9 15.2 126 132-268 22-147 (229)
372 4b8c_D Glucose-repressible alc 99.7 2.1E-18 7.1E-23 201.3 7.5 216 17-269 172-404 (727)
373 4ezg_A Putative uncharacterize 99.7 4.1E-17 1.4E-21 159.0 11.4 151 107-270 41-195 (197)
374 1zth_A RIO1 serine protein kin 99.7 1.3E-17 4.4E-22 169.8 6.5 127 481-616 48-219 (258)
375 1w8a_A SLIT protein; signaling 99.7 3E-16 1E-20 152.1 12.6 133 20-200 10-143 (192)
376 1w8a_A SLIT protein; signaling 99.6 7.9E-16 2.7E-20 149.1 13.2 132 132-272 11-142 (192)
377 3sb4_A Hypothetical leucine ri 99.6 4.2E-16 1.4E-20 164.8 11.1 236 17-262 48-327 (329)
378 3sb4_A Hypothetical leucine ri 99.6 7.4E-16 2.5E-20 163.0 11.7 278 17-355 24-326 (329)
379 2ell_A Acidic leucine-rich nuc 99.6 8.9E-16 3E-20 145.3 11.1 135 127-270 22-161 (168)
380 2je0_A Acidic leucine-rich nuc 99.6 7.9E-16 2.7E-20 142.5 8.4 129 128-265 16-149 (149)
381 2ell_A Acidic leucine-rich nuc 99.6 1.5E-15 5E-20 143.8 9.7 137 183-344 24-164 (168)
382 2wfh_A SLIT homolog 2 protein 99.6 5.6E-15 1.9E-19 143.1 13.0 128 132-270 13-140 (193)
383 2je0_A Acidic leucine-rich nuc 99.6 3.6E-15 1.2E-19 138.0 9.1 70 17-88 16-86 (149)
384 2wfh_A SLIT homolog 2 protein 99.6 1.2E-14 4.1E-19 140.8 13.1 129 20-197 12-140 (193)
385 2o6r_A Variable lymphocyte rec 99.6 1.6E-14 5.4E-19 137.9 13.0 133 131-273 9-141 (177)
386 4fdw_A Leucine rich hypothetic 99.5 2E-13 6.7E-18 147.7 21.1 253 5-269 123-383 (401)
387 2o6r_A Variable lymphocyte rec 99.5 3.2E-14 1.1E-18 135.8 12.4 131 112-249 9-141 (177)
388 1a9n_A U2A', U2A'; complex (nu 99.5 1.9E-14 6.3E-19 137.3 8.6 134 124-270 14-154 (176)
389 4gyi_A RIO2 kinase; protein ki 99.5 1.6E-15 5.6E-20 160.1 1.3 128 480-615 95-264 (397)
390 1a9n_A U2A', U2A'; complex (nu 99.5 2.4E-14 8.2E-19 136.6 8.2 133 179-339 15-153 (176)
391 4fdw_A Leucine rich hypothetic 99.5 2.6E-12 9E-17 138.8 20.8 190 40-264 111-308 (401)
392 1ds9_A Outer arm dynein; leuci 99.5 9.9E-16 3.4E-20 149.3 -5.6 135 125-271 14-155 (198)
393 1ds9_A Outer arm dynein; leuci 99.4 1.5E-15 5.3E-20 147.9 -5.3 114 150-269 15-128 (198)
394 4fs7_A Uncharacterized protein 99.4 7E-12 2.4E-16 135.8 20.7 130 226-360 247-376 (394)
395 3g39_A Variable lymphocyte rec 99.4 1E-12 3.6E-17 124.3 11.1 107 19-167 10-116 (170)
396 4fs7_A Uncharacterized protein 99.4 5.8E-12 2E-16 136.4 18.1 60 296-358 292-351 (394)
397 3g39_A Variable lymphocyte rec 99.4 1.3E-12 4.5E-17 123.6 10.7 107 155-271 11-117 (170)
398 2r9u_A Variable lymphocyte rec 99.4 1.8E-12 6.1E-17 123.1 11.1 106 20-167 14-119 (174)
399 2r9u_A Variable lymphocyte rec 99.4 2.3E-12 7.9E-17 122.3 10.8 105 156-270 15-119 (174)
400 3un9_A NLR family member X1; l 99.3 1.1E-13 3.8E-18 148.1 -1.8 61 18-78 72-138 (372)
401 3un9_A NLR family member X1; l 99.2 9.6E-13 3.3E-17 140.8 -1.8 146 183-346 101-259 (372)
402 2ifg_A High affinity nerve gro 99.2 6E-11 2.1E-15 126.1 10.7 105 21-167 11-117 (347)
403 3tm0_A Aminoglycoside 3'-phosp 99.1 2.9E-11 9.8E-16 123.2 6.6 140 476-615 10-213 (263)
404 2ifg_A High affinity nerve gro 99.1 7.3E-11 2.5E-15 125.4 9.7 89 179-269 27-116 (347)
405 4gt6_A Cell surface protein; l 99.0 4.9E-08 1.7E-12 105.4 25.9 143 18-164 64-216 (394)
406 4gt6_A Cell surface protein; l 99.0 5.8E-08 2E-12 104.8 24.2 219 33-264 54-296 (394)
407 1nd4_A Aminoglycoside 3'-phosp 98.9 3.1E-10 1.1E-14 115.1 4.4 131 478-615 18-214 (264)
408 3dxp_A Putative acyl-COA dehyd 98.9 5.3E-09 1.8E-13 111.5 10.0 132 484-615 42-248 (359)
409 2ra8_A Uncharacterized protein 98.8 2.6E-09 8.7E-14 113.3 5.1 84 151-243 250-341 (362)
410 2ra8_A Uncharacterized protein 98.8 9.5E-09 3.2E-13 108.9 7.8 89 127-219 250-341 (362)
411 4h09_A Hypothetical leucine ri 98.6 3.8E-06 1.3E-10 89.9 24.1 240 13-269 41-299 (379)
412 4h09_A Hypothetical leucine ri 98.6 4.3E-06 1.5E-10 89.5 23.2 291 36-360 40-343 (379)
413 3sg8_A APH(2'')-ID; antibiotic 98.5 4.5E-07 1.5E-11 94.0 11.0 130 484-615 24-223 (304)
414 3r70_A Aminoglycoside phosphot 98.4 8.6E-07 3E-11 92.6 11.7 129 481-615 38-237 (320)
415 1io0_A Tropomodulin; LRR prote 98.4 1.3E-07 4.4E-12 90.3 2.7 66 129-196 93-164 (185)
416 3rw6_A Nuclear RNA export fact 98.3 3.9E-07 1.3E-11 91.5 5.7 64 17-82 169-236 (267)
417 1io0_A Tropomodulin; LRR prote 98.3 1.6E-07 5.6E-12 89.6 2.5 112 106-220 32-163 (185)
418 3rw6_A Nuclear RNA export fact 98.3 3.5E-07 1.2E-11 91.9 4.9 80 115-200 148-237 (267)
419 3tdw_A Gentamicin resistance p 98.2 7E-06 2.4E-10 85.0 11.1 130 484-615 23-224 (306)
420 3d1u_A Putative fructosamine-3 97.9 1.7E-05 5.7E-10 81.2 8.2 69 483-555 18-97 (288)
421 3ovc_A Hygromycin-B 4-O-kinase 97.9 1.9E-05 6.5E-10 83.7 8.8 127 482-615 43-243 (362)
422 4gkh_A Aminoglycoside 3'-phosp 97.9 1.5E-05 5E-10 80.9 7.3 127 486-615 30-223 (272)
423 3ats_A Putative uncharacterize 97.6 4.3E-05 1.5E-09 80.9 5.8 103 513-615 72-252 (357)
424 3e4g_A ATP synthase subunit S, 97.4 6.8E-05 2.3E-09 69.7 3.8 33 20-52 63-95 (176)
425 3e4g_A ATP synthase subunit S, 97.4 7.4E-05 2.5E-09 69.5 3.7 93 34-140 53-150 (176)
426 3jr1_A Putative fructosamine-3 97.2 0.00063 2.2E-08 70.1 8.4 125 483-611 39-232 (312)
427 2q83_A YTAA protein; 2635576, 97.1 0.00051 1.7E-08 71.9 6.8 44 572-615 199-252 (346)
428 2olc_A MTR kinase, methylthior 97.1 0.00026 8.8E-09 76.1 4.1 66 485-552 35-119 (397)
429 1pgv_A TMD-1, tropomodulin TMD 96.8 0.00055 1.9E-08 64.8 3.5 83 109-193 40-136 (197)
430 1pgv_A TMD-1, tropomodulin TMD 96.8 0.00062 2.1E-08 64.5 3.4 92 105-196 65-170 (197)
431 2pyw_A Uncharacterized protein 96.6 0.0046 1.6E-07 66.7 9.2 31 584-615 231-261 (420)
432 2ppq_A HSK, HK, homoserine kin 96.5 0.0027 9.1E-08 65.8 6.2 146 468-615 5-217 (322)
433 3rfe_A Platelet glycoprotein I 96.5 0.0028 9.7E-08 55.9 5.4 56 21-78 11-67 (130)
434 3rfe_A Platelet glycoprotein I 96.5 0.0035 1.2E-07 55.3 6.1 36 154-195 32-67 (130)
435 3f7w_A Putative fructosamine-3 96.5 0.0034 1.2E-07 63.9 6.8 69 482-554 17-96 (288)
436 3dxq_A Choline/ethanolamine ki 96.4 0.0059 2E-07 62.6 8.0 125 482-615 20-202 (301)
437 1nw1_A Choline kinase (49.2 KD 95.4 0.008 2.7E-07 64.9 3.7 30 586-615 250-307 (429)
438 2qg7_A Ethanolamine kinase PV0 95.3 0.029 9.9E-07 60.9 7.9 66 485-555 113-188 (458)
439 3feg_A Choline/ethanolamine ki 95.2 0.015 5.2E-07 61.4 5.1 100 512-615 97-254 (379)
440 1zyl_A Hypothetical protein YI 95.1 0.036 1.2E-06 57.3 7.6 29 585-615 195-223 (328)
441 3c5i_A Choline kinase; choline 94.3 0.036 1.2E-06 58.4 5.3 30 585-615 212-241 (369)
442 3i1a_A Spectinomycin phosphotr 93.6 0.055 1.9E-06 56.3 5.0 31 585-615 206-236 (339)
443 3f2s_A CK, chetk-alpha, cholin 91.3 0.17 5.8E-06 53.6 5.1 31 585-615 244-280 (401)
444 3mes_A Choline kinase; malaria 88.3 0.31 1.1E-05 52.0 4.3 30 585-615 262-291 (424)
445 3csv_A Aminoglycoside phosphot 86.5 0.62 2.1E-05 47.9 5.2 32 584-615 182-217 (333)
446 4ann_A ESSB; membrane protein, 72.8 3.2 0.00011 39.3 4.4 86 526-617 43-130 (215)
447 4ano_A ESSB; membrane protein, 67.1 5.6 0.00019 37.8 4.7 84 526-616 48-134 (219)
448 2yle_A Protein spire homolog 1 65.5 3.1 0.00011 39.5 2.6 84 557-668 43-127 (229)
449 3cxl_A N-chimerin; SH2, RHO-GA 60.1 1.3 4.3E-05 48.0 -1.3 53 484-539 146-215 (463)
450 3g15_A CK, chetk-alpha, cholin 50.9 6.7 0.00023 41.3 2.5 29 587-615 246-280 (401)
451 2lz0_A Uncharacterized protein 28.6 68 0.0023 25.9 4.6 47 219-266 7-53 (100)
452 2lz0_A Uncharacterized protein 23.6 81 0.0028 25.5 4.2 45 30-75 8-52 (100)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=7.8e-50 Score=472.86 Aligned_cols=387 Identities=28% Similarity=0.419 Sum_probs=302.0
Q ss_pred ccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCcc-ccCCCCCCeeeCcCCCCCCccchhhcCCC-CCCEE
Q 041467 18 TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPAN-LSSGSNLIKLSTDSNNLVRDILTEICSLF-KLERL 95 (746)
Q Consensus 18 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L 95 (746)
++|++|+|++|.+++.+|..|+++++|++|+|++|++++.+|.. |.++++|++|++++|.+.+.+|..+.+++ +|+.|
T Consensus 294 ~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L 373 (768)
T 3rgz_A 294 DTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTL 373 (768)
T ss_dssp TTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEE
T ss_pred CcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEE
Confidence 55555555555555555555555555555555555555555544 55555555555555555555555555554 56666
Q ss_pred EccCCCC----cCcccC--CCCCCEEeccCCCcc-----cccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCC
Q 041467 96 RIDCGGR----IDSLGH--LKSLLLLSLAFNQFL-----SLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNN 164 (746)
Q Consensus 96 ~l~~~~~----~~~~~~--l~~L~~L~Ls~N~l~-----~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 164 (746)
+++.|.. +..+.. +++|+.|++++|++. .+.++++|+.|+|++|++++.+|..|+.+++|++|+|++|.
T Consensus 374 ~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~ 453 (768)
T 3rgz_A 374 DLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNM 453 (768)
T ss_dssp ECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSC
T ss_pred EccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCc
Confidence 5555432 223333 567777777777773 45677888888888888888888888888888888888888
Q ss_pred CCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccc
Q 041467 165 LGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQL 244 (746)
Q Consensus 165 l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l 244 (746)
+++ .+|..+..+++|++|++++|++++.+|..+..++ +|++|++++|++++.+|.+|+++++|++|+|++|++
T Consensus 454 l~~------~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 526 (768)
T 3rgz_A 454 LEG------EIPQELMYVKTLETLILDFNDLTGEIPSGLSNCT-NLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSF 526 (768)
T ss_dssp CCS------CCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCT-TCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCC
T ss_pred ccC------cCCHHHcCCCCceEEEecCCcccCcCCHHHhcCC-CCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcc
Confidence 876 4667788888999999999999888888888887 799999999999988999999999999999999999
Q ss_pred eecCCcCCCCCCCCceeecccccccccccccccccChH------------------------------------------
Q 041467 245 IGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQ------------------------------------------ 282 (746)
Q Consensus 245 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~l------------------------------------------ 282 (746)
.+.+|..++++++|++|+|++|+++|.+|..+.....+
T Consensus 527 ~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 606 (768)
T 3rgz_A 527 SGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNR 606 (768)
T ss_dssp EEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGG
T ss_pred cCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhc
Confidence 98899999999999999999999988888765442211
Q ss_pred -------HhhhccCCCCCCccccCCCCCCeeeecCCcCccccchhhhhcccccceEEccCccccccCchhhhcccCCcee
Q 041467 283 -------TYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNLKNLLRL 355 (746)
Q Consensus 283 -------~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L 355 (746)
.+..|.+.|.+|..|+.+++|+.|||++|+++|.+|.+++.++.| +.|+|++|+++|.+|..++++++|+.|
T Consensus 607 l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L-~~L~Ls~N~l~g~ip~~l~~L~~L~~L 685 (768)
T 3rgz_A 607 LSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYL-FILNLGHNDISGSIPDEVGDLRGLNIL 685 (768)
T ss_dssp GGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTC-CEEECCSSCCCSCCCGGGGGCTTCCEE
T ss_pred cccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccC-CEEeCcCCccCCCCChHHhCCCCCCEE
Confidence 111366777888889999999999999999999999999999999 689999999999999999999999999
Q ss_pred ec---------CCCCCCCCCCCEEEccCCcCcccCCCCCccCCCCeeeEecCCCcCCCCCCCCCCccCCC
Q 041467 356 HI---------PEYPENLSFFELLNLSYNYFGSEVPTKGVFNNKTRFSIIGNGKLCGGLDELHLPSCRYK 416 (746)
Q Consensus 356 ~l---------p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~l~~~~~~~~~~~~~~~ 416 (746)
++ |..+..+++|+.||+|+|+++|.+|..+.+.++....+.||+++||.. ++.|...
T Consensus 686 dLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~----l~~C~~~ 751 (768)
T 3rgz_A 686 DLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYP----LPRCDPS 751 (768)
T ss_dssp ECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTT----SCCCCSC
T ss_pred ECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhcCCC----CcCCCCC
Confidence 64 677889999999999999999999999899999999999999999973 3467643
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=2.1e-46 Score=443.42 Aligned_cols=387 Identities=26% Similarity=0.425 Sum_probs=230.1
Q ss_pred ccccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCC-CCC
Q 041467 14 CILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSL-FKL 92 (746)
Q Consensus 14 ~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l-~~L 92 (746)
+..+++|++|+|++|.+++.+|..|+++++|++|+|++|++++.+|.. .+++|++|+|++|.+.+.+|..+..+ ++|
T Consensus 219 l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~--~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L 296 (768)
T 3rgz_A 219 LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLKSLQYLSLAENKFTGEIPDFLSGACDTL 296 (768)
T ss_dssp CTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEECCSSCCEESCCCC--CCTTCCEEECCSSEEEESCCCCSCTTCTTC
T ss_pred cccCCCCCEEECcCCcCCCcccHHHhcCCCCCEEECCCCcccCccCcc--ccCCCCEEECcCCccCCccCHHHHhhcCcC
Confidence 444566666666666666666666666666666666666665544443 45555555555555555555555554 666
Q ss_pred CEEEccCCC----CcCcccCCCCCCEEeccCCCcc------cccCCCCCcEeeCccCcccccCCccccCCC-CCCEEEcc
Q 041467 93 ERLRIDCGG----RIDSLGHLKSLLLLSLAFNQFL------SLSNASSLEMIEFSRNQFSGGVSVDFSRLK-NLSWLNLG 161 (746)
Q Consensus 93 ~~L~l~~~~----~~~~~~~l~~L~~L~Ls~N~l~------~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~-~L~~L~Ls 161 (746)
++|+++.+. .+..++++++|+.|+|++|++. .+.++++|++|+|++|++++.+|..+..++ +|++|+|+
T Consensus 297 ~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls 376 (768)
T 3rgz_A 297 TGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLS 376 (768)
T ss_dssp SEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECC
T ss_pred CEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEcc
Confidence 666666542 2245666666666666666653 145566666666666666666666665554 56666666
Q ss_pred CCCCCCCCCCCc--------------------cccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCccc
Q 041467 162 VNNLGSGTANEL--------------------DFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRIS 221 (746)
Q Consensus 162 ~N~l~~~~~~~~--------------------~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~ 221 (746)
+|.+++..+..+ .+|..+.++++|+.|+|++|++++.+|..+..++ +|+.|++++|+++
T Consensus 377 ~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~-~L~~L~L~~n~l~ 455 (768)
T 3rgz_A 377 SNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLS-KLRDLKLWLNMLE 455 (768)
T ss_dssp SSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCT-TCCEEECCSSCCC
T ss_pred CCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCC-CCCEEECCCCccc
Confidence 665543111100 2344555666666666666666666666666665 5666666666666
Q ss_pred ccCCccccCCCCCCeeecccccceecCCcCCCCCCCCceeecccccccccccccccccCh---HHhhhccCCCCCCcccc
Q 041467 222 STIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTL---QTYLFNNLQGNIPSSLA 298 (746)
Q Consensus 222 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~---l~~l~n~l~~~~p~~~~ 298 (746)
+.+|..|+.+++|++|++++|++.+.+|..++++++|++|+|++|++++.+|..++.++. +++.+|++.|.+|..++
T Consensus 456 ~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~ 535 (768)
T 3rgz_A 456 GEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELG 535 (768)
T ss_dssp SCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGG
T ss_pred CcCCHHHcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHc
Confidence 666666666666666666666666666666666666666666666666666655544333 33335666666666666
Q ss_pred CCCCCCeeeecCCcCccccchhhhhc------------------------------------------------------
Q 041467 299 NCKSLLGLSVSHNKLTSTLPQQILSV------------------------------------------------------ 324 (746)
Q Consensus 299 ~l~~L~~L~Ls~N~l~~~~p~~~~~l------------------------------------------------------ 324 (746)
.+++|+.|++++|+++|.+|..++..
T Consensus 536 ~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l 615 (768)
T 3rgz_A 536 DCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNI 615 (768)
T ss_dssp GCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCT
T ss_pred CCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhcccccccccc
Confidence 66666666666666666666554331
Q ss_pred ----------------ccccceEEccCccccccCchhhhcccCCceee---------cCCCCCCCCCCCEEEccCCcCcc
Q 041467 325 ----------------TTLSLYLELDNNLLNGSLPPEVGNLKNLLRLH---------IPEYPENLSFFELLNLSYNYFGS 379 (746)
Q Consensus 325 ----------------~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~---------lp~~~~~l~~L~~L~ls~N~l~~ 379 (746)
..+ ++|||++|+++|.+|.++++++.|+.|+ +|..++.++.|+.||||+|+++|
T Consensus 616 ~~~~~~g~~~~~~~~l~~L-~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g 694 (768)
T 3rgz_A 616 TSRVYGGHTSPTFDNNGSM-MFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDG 694 (768)
T ss_dssp TSCEEEEECCCSCSSSBCC-CEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEE
T ss_pred ccceecccCchhhhccccc-cEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccC
Confidence 223 3566666666666666666666666663 34555666666666666666666
Q ss_pred cCCCC-CccCCCCeeeEecCCCcCCCC
Q 041467 380 EVPTK-GVFNNKTRFSIIGNGKLCGGL 405 (746)
Q Consensus 380 ~~p~~-~~~~~~~~~~~~~n~~l~~~~ 405 (746)
.+|.. ..+..+..+++.+| .+.|.+
T Consensus 695 ~ip~~l~~l~~L~~L~ls~N-~l~g~i 720 (768)
T 3rgz_A 695 RIPQAMSALTMLTEIDLSNN-NLSGPI 720 (768)
T ss_dssp CCCGGGGGCCCCSEEECCSS-EEEEEC
T ss_pred cCChHHhCCCCCCEEECcCC-cccccC
Confidence 66642 23445555555544 344443
No 3
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=1.8e-45 Score=381.94 Aligned_cols=231 Identities=20% Similarity=0.244 Sum_probs=175.5
Q ss_pred hhcCCCCCCeEeecCCeeEEE------EEeehhhhh--hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhh
Q 041467 478 ATNNFSPANKIREGGFNIVYN------VAMKVANLK--QKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKA 549 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~------vavK~~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~ 549 (746)
..++++..+.||+|+||+||+ ||||+++.. ..+..+.|.+|+++|++++|||||+++|+|.+ +..++||||
T Consensus 34 ~~~~l~l~~~iG~G~fG~Vy~~~~~~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmEy 112 (307)
T 3omv_A 34 EASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQW 112 (307)
T ss_dssp CTTSCCEEEECCCCSSSEEEEEESSSEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEEC
T ss_pred cHHHeEEeeEEeeCCCcEEEEEEECCcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEEc
Confidence 346778889999999999998 899998643 23456789999999999999999999998865 568999999
Q ss_pred ccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCC
Q 041467 550 ISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623 (746)
Q Consensus 550 ~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~ 623 (746)
|++|+|. ...++|.++..|+.|||+||+|||++ +||||||||+|||+++++.+||+|||+|+.......
T Consensus 113 ~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~-- 187 (307)
T 3omv_A 113 CEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSG-- 187 (307)
T ss_dssp CSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC--------
T ss_pred CCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceecccCCc--
Confidence 9999986 34699999999999999999999999 999999999999999999999999999987643221
Q ss_pred CcccccccccccccccccccccccccccccCCCccceeeccceeeccc-----cc------cccchhhc-c--c---cCC
Q 041467 624 TAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNE-----KK------QNKSILKS-A--G---IKG 686 (746)
Q Consensus 624 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~-----~~------~~~~i~~~-~--~---~~~ 686 (746)
.......+||+.|||||++.+.....++.++|||||||++|... +. ....+... . + ...
T Consensus 188 ----~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~ 263 (307)
T 3omv_A 188 ----SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLY 263 (307)
T ss_dssp ----------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCSTTSC
T ss_pred ----ceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCccccc
Confidence 12234578999999999998665444566799999999999111 11 11111111 1 1 112
Q ss_pred CccHHHHHHhhCCCCCCCCC-CCCccchhhhcc
Q 041467 687 KKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGL 718 (746)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~ 718 (746)
..+.+.+..++..|+...|+ ||++.++...++
T Consensus 264 ~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le 296 (307)
T 3omv_A 264 KNCPKAMKRLVADCVKKVKEERPLFPQILSSIE 296 (307)
T ss_dssp TTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHH
T ss_pred ccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHH
Confidence 34556677777777777787 899887665444
No 4
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=4.3e-45 Score=377.97 Aligned_cols=178 Identities=22% Similarity=0.339 Sum_probs=158.2
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccch
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
.++|+..+.||+|+||+||+ ||||++.+.. ....+.+.+|+++|++++|||||++++++.+.+..|+|
T Consensus 31 ~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yiv 110 (311)
T 4aw0_A 31 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFG 110 (311)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 35799999999999999997 9999987543 34457799999999999999999999999999999999
Q ss_pred hhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCC
Q 041467 547 FKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 547 ~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~ 621 (746)
||||++|+|. ...+++.+++.++.||+.||+|||++ +||||||||+|||++.++.+||+|||+|+.+.....
T Consensus 111 mEy~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~ 187 (311)
T 4aw0_A 111 LSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK 187 (311)
T ss_dssp ECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTT
T ss_pred EecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCC
Confidence 9999999996 46799999999999999999999999 999999999999999999999999999998743322
Q ss_pred CCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.....+.+||+.|||||++.+..|+.+ +||||+||++|
T Consensus 188 ------~~~~~~~~GTp~YmAPEvl~~~~y~~~---~DiWSlGvily 225 (311)
T 4aw0_A 188 ------QARANSFVGTAQYVSPELLTEKSACKS---SDLWALGCIIY 225 (311)
T ss_dssp ------CCCBCCCCSCGGGCCHHHHHHSCBCHH---HHHHHHHHHHH
T ss_pred ------cccccCcccCcccCCHHHHcCCCCCcH---HHHHHHHHHHH
Confidence 123345899999999999998887655 99999999999
No 5
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=3.3e-45 Score=384.58 Aligned_cols=176 Identities=20% Similarity=0.260 Sum_probs=158.1
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhh
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKA 549 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~ 549 (746)
...|+..+.||+|+||+||+ ||||++........+.+.+|+++|++++|||||+++++|.+.+..|+||||
T Consensus 73 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy 152 (346)
T 4fih_A 73 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 152 (346)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hHhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeC
Confidence 35689999999999999997 999999776655666789999999999999999999999999999999999
Q ss_pred ccCCccc----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCc
Q 041467 550 ISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTA 625 (746)
Q Consensus 550 ~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~ 625 (746)
|++|+|. ...+++.++..|+.||+.||+|||++ +||||||||+|||++.+|.+||+|||+|+.+....
T Consensus 153 ~~gg~L~~~l~~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~----- 224 (346)
T 4fih_A 153 LEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV----- 224 (346)
T ss_dssp CTTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSS-----
T ss_pred CCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCCCC-----
Confidence 9999986 56799999999999999999999999 99999999999999999999999999998764322
Q ss_pred ccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 626 ETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 626 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
....+.+||+.|||||++.+..|+. ++||||+||++|
T Consensus 225 ---~~~~~~~GTp~YmAPEvl~~~~y~~---~~DiWSlGvily 261 (346)
T 4fih_A 225 ---PRRKSLVGTPYWMAPELISRLPYGP---EVDIWSLGIMVI 261 (346)
T ss_dssp ---CCBCCCCSCGGGCCHHHHTTCCBCT---HHHHHHHHHHHH
T ss_pred ---CcccccccCcCcCCHHHHCCCCCCc---HHHHHHHHHHHH
Confidence 2234578999999999998887755 599999999999
No 6
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=7.8e-46 Score=384.76 Aligned_cols=230 Identities=22% Similarity=0.289 Sum_probs=184.3
Q ss_pred cCCCCCCeEeecCCeeEEE--------------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccc
Q 041467 480 NNFSPANKIREGGFNIVYN--------------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~--------------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~l 545 (746)
++|...+.||+|+||+||+ ||||+++.......++|.+|+++|++++|||||+++|+|.+.+..++
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 92 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 92 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence 5678889999999999996 89999976656667889999999999999999999999999999999
Q ss_pred hhhhccCCccc------------------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEE
Q 041467 546 DFKAISNGQLR------------------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHV 607 (746)
Q Consensus 546 v~e~~~~g~l~------------------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki 607 (746)
|||||++|+|. ...++|.++..|+.|||+||+|||++ +||||||||+|||+++++.+||
T Consensus 93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~~~Ki 169 (299)
T 4asz_A 93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVKI 169 (299)
T ss_dssp EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCCcEEE
Confidence 99999999996 13589999999999999999999999 9999999999999999999999
Q ss_pred ccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeeccc--ccc------ccc--
Q 041467 608 GDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNE--KKQ------NKS-- 677 (746)
Q Consensus 608 ~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~--~~~------~~~-- 677 (746)
+|||+|+....... .......+||+.|||||++.+..|+.+ +|||||||++|... ... ..+
T Consensus 170 ~DFGla~~~~~~~~------~~~~~~~~gt~~ymAPE~~~~~~~~~k---~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~ 240 (299)
T 4asz_A 170 GDFGMSRDVYSTDY------YRVGGHTMLPIRWMPPESIMYRKFTTE---SDVWSLGVVLWEIFTYGKQPWYQLSNNEVI 240 (299)
T ss_dssp CCCSCHHHHTGGGC------EEETTTEEECGGGCCHHHHHHCCCCHH---HHHHHHHHHHHHHHTTTCCTTTTSCHHHHH
T ss_pred CCcccceecCCCCc------eeecCceecChhhcCHHHHcCCCCCch---hhHHHHHHHHHHHHcCCCCCCCCCCHHHHH
Confidence 99999987643211 112234679999999999998888665 99999999999221 111 011
Q ss_pred --hhh-ccccCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhcccCC
Q 041467 678 --ILK-SAGIKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLRLP 721 (746)
Q Consensus 678 --i~~-~~~~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~~ 721 (746)
+.. ..+..+..+.+.+..++..||...|+ ||++.++...++.+.
T Consensus 241 ~~i~~~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~ 288 (299)
T 4asz_A 241 ECITQGRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLA 288 (299)
T ss_dssp HHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHcCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 111 11223345666777888888888888 999998877766554
No 7
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=3.5e-45 Score=385.15 Aligned_cols=229 Identities=21% Similarity=0.253 Sum_probs=178.5
Q ss_pred cCCCCCCeEeecCCeeEEE--------------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccc
Q 041467 480 NNFSPANKIREGGFNIVYN--------------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~--------------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~l 545 (746)
++|...+.||+|+||+||+ ||||+++.......++|.+|+++|++++|||||+++|+|.+.+..++
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 120 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM 120 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 4667788999999999996 89999976666667889999999999999999999999999999999
Q ss_pred hhhhccCCccc--------------------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcE
Q 041467 546 DFKAISNGQLR--------------------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVT 605 (746)
Q Consensus 546 v~e~~~~g~l~--------------------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ 605 (746)
|||||++|+|. ...++|.+++.|+.|||+||+|||+. +||||||||+|||+++++.+
T Consensus 121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~~~~~ 197 (329)
T 4aoj_A 121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGLVV 197 (329)
T ss_dssp EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECCCCcE
Confidence 99999999985 13589999999999999999999999 99999999999999999999
Q ss_pred EEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc--cc---------
Q 041467 606 HVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK--KQ--------- 674 (746)
Q Consensus 606 ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~--~~--------- 674 (746)
||+|||+|+.+..... .......+||+.|||||++.+..++.+ +|||||||++|.... ..
T Consensus 198 Ki~DFGla~~~~~~~~------~~~~~~~~gt~~ymAPE~~~~~~~~~~---sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~ 268 (329)
T 4aoj_A 198 KIGDFGMSRDIYSTDY------YRVGGRTMLPIRWMPPESILYRKFTTE---SDVWSFGVVLWEIFTYGKQPWYQLSNTE 268 (329)
T ss_dssp EECCCC----------------------CCCCGGGCCHHHHTTCCCCHH---HHHHHHHHHHHHHHTTSCCTTCSSCHHH
T ss_pred EEcccccceeccCCCc------ceecCcccccccccChhhhcCCCCCcc---ccccchHHHHHHHHcCCCCCCCCCCHHH
Confidence 9999999987643221 112234679999999999999888665 999999999992211 11
Q ss_pred -ccchhh-ccccCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhcccC
Q 041467 675 -NKSILK-SAGIKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLRL 720 (746)
Q Consensus 675 -~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~ 720 (746)
...+.. ..+..+..+.+.+..++..||...|+ ||++.++...++.+
T Consensus 269 ~~~~i~~g~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l 317 (329)
T 4aoj_A 269 AIDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQAL 317 (329)
T ss_dssp HHHHHHHTCCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHH
T ss_pred HHHHHHcCCCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence 111111 11222345667788888888888888 99999887666554
No 8
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=6e-45 Score=383.24 Aligned_cols=177 Identities=20% Similarity=0.303 Sum_probs=150.1
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccch
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
..++|+..+.||+|+||+||+ ||||++.... ....+.+.+|+++|++++|||||++++++.+.+..|+|
T Consensus 22 sme~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiV 101 (350)
T 4b9d_A 22 SMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIV 101 (350)
T ss_dssp CCCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred cccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEE
Confidence 357899999999999999997 9999986542 34466799999999999999999999999999999999
Q ss_pred hhhccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCC
Q 041467 547 FKAISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGY 619 (746)
Q Consensus 547 ~e~~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~ 619 (746)
||||++|+|. ...+++.+++.|+.||+.||+|||++ +||||||||+|||++.+|.+||+|||+|+.+..
T Consensus 102 mEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~- 177 (350)
T 4b9d_A 102 MDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLNS- 177 (350)
T ss_dssp EECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCCH-
T ss_pred EeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeecC-
Confidence 9999999985 23468999999999999999999999 999999999999999999999999999987521
Q ss_pred CCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 620 EPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 620 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......+.+||+.|||||++.+..|+.+ +||||+||++|
T Consensus 178 -------~~~~~~~~~GT~~YmAPE~l~~~~y~~~---~DiwSlGvily 216 (350)
T 4b9d_A 178 -------TVELARACIGTPYYLSPEICENKPYNNK---SDIWALGCVLY 216 (350)
T ss_dssp -------HHHHHHHHHSCCTTCCHHHHTTCCCCHH---HHHHHHHHHHH
T ss_pred -------CcccccccCCCccccCHHHHCCCCCCcH---HHHHHHHHHHH
Confidence 1122345789999999999998887655 99999999999
No 9
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=1.9e-44 Score=375.95 Aligned_cols=227 Identities=20% Similarity=0.225 Sum_probs=180.3
Q ss_pred CCCCCCeEeecCCeeEEE--------------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccc
Q 041467 481 NFSPANKIREGGFNIVYN--------------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 481 ~~~~~~~ig~g~~g~v~~--------------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~l 545 (746)
++...+.||+|+||+||+ ||||+++... ....++|.+|+.++++++|||||+++|+|.+.+..++
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l 106 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM 106 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEE
Confidence 456678999999999996 8999986543 3345789999999999999999999999999999999
Q ss_pred hhhhccCCccc---------------------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCc
Q 041467 546 DFKAISNGQLR---------------------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVV 604 (746)
Q Consensus 546 v~e~~~~g~l~---------------------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~ 604 (746)
|||||++|+|. ...++|.++..|+.|||+||+|||++ +||||||||+||||++++.
T Consensus 107 V~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~~~~~ 183 (308)
T 4gt4_A 107 IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLN 183 (308)
T ss_dssp EEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGC
T ss_pred EEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEECCCCC
Confidence 99999999985 12489999999999999999999999 9999999999999999999
Q ss_pred EEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc--cc------cc
Q 041467 605 THVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK--KQ------NK 676 (746)
Q Consensus 605 ~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~--~~------~~ 676 (746)
+||+|||+|+.+..... .......+||+.|||||++.+..|+.+ +|||||||++|.... .. ..
T Consensus 184 ~Ki~DFGlar~~~~~~~------~~~~~~~~gt~~ymAPE~l~~~~~s~k---sDVwSfGvvl~El~t~g~~Pf~~~~~~ 254 (308)
T 4gt4_A 184 VKISDLGLFREVYAADY------YKLLGNSLLPIRWMAPEAIMYGKFSID---SDIWSYGVVLWEVFSYGLQPYCGYSNQ 254 (308)
T ss_dssp EEECCSCCBCGGGGGGC------BCSSSSSCBCGGGCCHHHHHHCCCCHH---HHHHHHHHHHHHHHTTTCCTTTTCCHH
T ss_pred EEECCcccceeccCCCc------eeEecccccCCcccCHHHHhCCCCCcc---chhhhHHHHHHHHHhCCCCCCCCCCHH
Confidence 99999999987643221 122334689999999999998887665 999999999992211 11 01
Q ss_pred c----hhh-ccccCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhccc
Q 041467 677 S----ILK-SAGIKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLR 719 (746)
Q Consensus 677 ~----i~~-~~~~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~ 719 (746)
. +.. ......+.+.+.+..++..||...|+ ||++.++...++.
T Consensus 255 ~~~~~i~~~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a 303 (308)
T 4gt4_A 255 DVVEMIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRA 303 (308)
T ss_dssp HHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHT
T ss_pred HHHHHHHcCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHh
Confidence 1 111 11122345667788888888888888 9999887765543
No 10
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=2.8e-42 Score=398.99 Aligned_cols=375 Identities=18% Similarity=0.224 Sum_probs=322.9
Q ss_pred cCccccccccccEEecccCcCcccCchhhhCCccCcEEecccC-------------------------------------
Q 041467 10 SKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNN------------------------------------- 52 (746)
Q Consensus 10 ~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N------------------------------------- 52 (746)
....|....+++.|+|++|.++|.+|++|++|++|++|+|++|
T Consensus 73 ~GV~C~~~~~V~~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~ 152 (636)
T 4eco_A 73 PGVSLNSNGRVTGLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDY 152 (636)
T ss_dssp TTEEECTTCCEEEEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCC
T ss_pred CCeEEcCCCCEEEEEecCcccCCcCChHHhcCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhcc
Confidence 4444544468999999999999999999999999999999998
Q ss_pred -----------------------------------------cCCccCCccccCCCCCCeeeCcCCCCCCc----------
Q 041467 53 -----------------------------------------SFSCAIPANLSSGSNLIKLSTDSNNLVRD---------- 81 (746)
Q Consensus 53 -----------------------------------------~l~~~~p~~~~~l~~L~~L~L~~N~l~~~---------- 81 (746)
++++ +|..|+++++|++|+|++|.+.+.
T Consensus 153 ~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~ 231 (636)
T 4eco_A 153 DPREDFSDLIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENEN 231 (636)
T ss_dssp CGGGGSCHHHHHHHHHCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTT
T ss_pred CchhhHHHHHHHHhhcCccccccccccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccc
Confidence 4445 889999999999999999999886
Q ss_pred -------cchhhc--CCCCCCEEEccCCC----CcCcccCCCCCCEEeccCCC-ccc------ccCC------CCCcEee
Q 041467 82 -------ILTEIC--SLFKLERLRIDCGG----RIDSLGHLKSLLLLSLAFNQ-FLS------LSNA------SSLEMIE 135 (746)
Q Consensus 82 -------~~~~~~--~l~~L~~L~l~~~~----~~~~~~~l~~L~~L~Ls~N~-l~~------l~~l------~~L~~L~ 135 (746)
+|..++ ++++|++|+++.|. .+..++++++|+.|+|++|+ +.. +.++ ++|+.|+
T Consensus 232 ~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~ 311 (636)
T 4eco_A 232 SEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIY 311 (636)
T ss_dssp SHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEE
T ss_pred cchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEE
Confidence 999999 99999999999864 34678999999999999998 643 3344 8999999
Q ss_pred CccCcccccCCc--cccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhcccc-cce
Q 041467 136 FSRNQFSGGVSV--DFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSST-IKQ 212 (746)
Q Consensus 136 Ls~N~l~~~~~~--~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~-L~~ 212 (746)
|++|+++ .+|. .|+.+++|++|+|++|.+++ .+| .+..+++|+.|++++|+++ .+|..+..+. + |+.
T Consensus 312 L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g------~ip-~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~-~~L~~ 381 (636)
T 4eco_A 312 IGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEG------KLP-AFGSEIKLASLNLAYNQIT-EIPANFCGFT-EQVEN 381 (636)
T ss_dssp CCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEE------ECC-CCEEEEEESEEECCSSEEE-ECCTTSEEEC-TTCCE
T ss_pred CCCCcCC-ccCchhhhccCCCCCEEeCcCCcCcc------chh-hhCCCCCCCEEECCCCccc-cccHhhhhhc-ccCcE
Confidence 9999999 7787 89999999999999999986 456 6888999999999999998 8899999997 6 999
Q ss_pred EEcccCcccccCCccccCCC--CCCeeecccccceecCCcCCC-------CCCCCceeeccccccccccccc---ccccC
Q 041467 213 IAMGSNRISSTIPHGIRNLV--NLNWLTMESSQLIGTIPPLIG-------ETPNLQLLNIGGNHLQGSILSS---LGNLT 280 (746)
Q Consensus 213 L~l~~N~i~~~~p~~~~~l~--~L~~L~L~~N~l~~~~p~~~~-------~l~~L~~L~Ls~N~l~~~~~~~---l~~l~ 280 (746)
|++++|+++ .+|..+..+. +|++|++++|++.+.+|..|. .+++|++|+|++|++++..+.. +.+|+
T Consensus 382 L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~ 460 (636)
T 4eco_A 382 LSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLS 460 (636)
T ss_dssp EECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCS
T ss_pred EEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCC
Confidence 999999999 7899888765 899999999999999999998 8889999999999999544433 45677
Q ss_pred hHHhhhccCCCCCCcc-ccCC-------CCCCeeeecCCcCccccchhhh--hcccccceEEccCccccccCchhhhccc
Q 041467 281 LQTYLFNNLQGNIPSS-LANC-------KSLLGLSVSHNKLTSTLPQQIL--SVTTLSLYLELDNNLLNGSLPPEVGNLK 350 (746)
Q Consensus 281 ~l~~l~n~l~~~~p~~-~~~l-------~~L~~L~Ls~N~l~~~~p~~~~--~l~~l~~~L~Ls~N~l~~~~p~~~~~l~ 350 (746)
.|++.+|++. .+|.. +... ++|+.|+|++|+++ .+|..++ .+++| +.|+|++|++++ +|..+++++
T Consensus 461 ~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L-~~L~Ls~N~l~~-ip~~~~~l~ 536 (636)
T 4eco_A 461 SINLMGNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYL-VGIDLSYNSFSK-FPTQPLNSS 536 (636)
T ss_dssp EEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTC-CEEECCSSCCSS-CCCGGGGCS
T ss_pred EEECCCCCCC-CcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCc-CEEECCCCCCCC-cChhhhcCC
Confidence 7777789998 55554 4333 39999999999999 7999987 89999 689999999997 999999999
Q ss_pred CCceeec---------------CCCCCCCCCCCEEEccCCcCcccCCCCCccCCCCeeeEecCCCcC
Q 041467 351 NLLRLHI---------------PEYPENLSFFELLNLSYNYFGSEVPTKGVFNNKTRFSIIGNGKLC 402 (746)
Q Consensus 351 ~L~~L~l---------------p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~l~ 402 (746)
+|+.|++ |..+..+++|+.|++++|++ +.+|.. ....+..+++.+|+..|
T Consensus 537 ~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~-~~~~L~~L~Ls~N~l~~ 601 (636)
T 4eco_A 537 TLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEK-ITPNISVLDIKDNPNIS 601 (636)
T ss_dssp SCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSC-CCTTCCEEECCSCTTCE
T ss_pred CCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHh-HhCcCCEEECcCCCCcc
Confidence 9999976 44567789999999999999 778864 34788888888887654
No 11
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=3.4e-44 Score=366.25 Aligned_cols=175 Identities=26% Similarity=0.346 Sum_probs=140.4
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccch
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
.++|+..+.||+|+||+||+ ||||++.... ....+.+.+|++++++++|||||++++++.+.+..|+|
T Consensus 12 ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~iv 91 (275)
T 3hyh_A 12 IGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp --CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred eeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEE
Confidence 36899999999999999997 9999986432 33456799999999999999999999999999999999
Q ss_pred hhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCC
Q 041467 547 FKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 547 ~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~ 621 (746)
|||+ +|++. ...+++.++..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+|+.....
T Consensus 92 mEy~-~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~-- 165 (275)
T 3hyh_A 92 IEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG-- 165 (275)
T ss_dssp EECC-CEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC--------
T ss_pred EeCC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecCCC--
Confidence 9999 56664 56799999999999999999999999 9999999999999999999999999999875321
Q ss_pred CCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
....+.+||+.|||||++.+..++ +.++||||+||++|
T Consensus 166 -------~~~~~~~GT~~Y~APE~~~~~~y~--~~~~DiwSlGvily 203 (275)
T 3hyh_A 166 -------NFLKTSCGSPNYAAPEVISGKLYA--GPEVDVWSCGVILY 203 (275)
T ss_dssp ----------------CTTSCHHHHSSSSCC--CTHHHHHHHHHHHH
T ss_pred -------CccCCeeECcccCChhhhcCCCCC--CChhhhHHHHHHHH
Confidence 123347899999999999988764 33699999999999
No 12
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=4.5e-41 Score=388.45 Aligned_cols=378 Identities=20% Similarity=0.197 Sum_probs=258.0
Q ss_pred cccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEcc
Q 041467 19 FLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRID 98 (746)
Q Consensus 19 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 98 (746)
.+++|||++|.|++..|..|+++++|++|+|++|++++..|..|+++++|++|+|++|.+.+..|..|+++++|++|+++
T Consensus 34 ~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 113 (606)
T 3t6q_A 34 STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFI 113 (606)
T ss_dssp TCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECT
T ss_pred cCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeecc
Confidence 45666666666665556666666666666666666665556666666666666666666665556666666666666666
Q ss_pred CCCCc----CcccCCCCCCEEeccCCCcccc-----cCCCCCcEeeCccCcccccCCccccCCCCCC--EEEccCCCCCC
Q 041467 99 CGGRI----DSLGHLKSLLLLSLAFNQFLSL-----SNASSLEMIEFSRNQFSGGVSVDFSRLKNLS--WLNLGVNNLGS 167 (746)
Q Consensus 99 ~~~~~----~~~~~l~~L~~L~Ls~N~l~~l-----~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~--~L~Ls~N~l~~ 167 (746)
.+... ..++++++|++|+|++|++..+ ..+++|+.|++++|++++..+..|+.+++|+ .|++++|.+++
T Consensus 114 ~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~~ 193 (606)
T 3t6q_A 114 QTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAG 193 (606)
T ss_dssp TSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCCE
T ss_pred ccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccCc
Confidence 54322 3455666666666666666332 2355666666666666665566666666666 56666665554
Q ss_pred CCCCCcc---------------------------------------------------------------------cccc
Q 041467 168 GTANELD---------------------------------------------------------------------FINL 178 (746)
Q Consensus 168 ~~~~~~~---------------------------------------------------------------------~~~~ 178 (746)
..+..+. .+..
T Consensus 194 ~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~~ 273 (606)
T 3t6q_A 194 IEPGAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNT 273 (606)
T ss_dssp ECTTTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCTTT
T ss_pred cChhHhhhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCHHH
Confidence 3322210 1223
Q ss_pred ccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCc-CCCCCCC
Q 041467 179 LTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPP-LIGETPN 257 (746)
Q Consensus 179 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~ 257 (746)
|..+++|++|++++|+++ .+|..+..++ +|++|++++|++++..|..+.++++|++|++++|.+.+.+|. .+..+++
T Consensus 274 ~~~l~~L~~L~l~~n~l~-~lp~~l~~l~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~ 351 (606)
T 3t6q_A 274 FHCFSGLQELDLTATHLS-ELPSGLVGLS-TLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLEN 351 (606)
T ss_dssp TTTCTTCSEEECTTSCCS-CCCSSCCSCT-TCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTT
T ss_pred hccccCCCEEeccCCccC-CCChhhcccc-cCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchhhhhccCc
Confidence 667788888888888887 6777777776 688888888888877777888888888888888888766655 4788888
Q ss_pred Cceeecccccccccc--cccc---cccChHHhhhccCCCCCCccccCCCCCCeeeecCCcCccccchh-hhhcccccceE
Q 041467 258 LQLLNIGGNHLQGSI--LSSL---GNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQ-ILSVTTLSLYL 331 (746)
Q Consensus 258 L~~L~Ls~N~l~~~~--~~~l---~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~l~~~L 331 (746)
|++|++++|.+++.. +..+ .+|+.+++.+|.+.+..|..|..+++|+.|++++|++++..|.. +..++.+ +.|
T Consensus 352 L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L-~~L 430 (606)
T 3t6q_A 352 LRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLL-KVL 430 (606)
T ss_dssp CCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTC-CEE
T ss_pred CCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccC-CEE
Confidence 888888888887654 4333 44455555577787777888888888888888888887665544 6777777 578
Q ss_pred EccCccccccCchhhhcccCCceeecC------------CCCCCCCCCCEEEccCCcCcccCCC-CCccCCCCeeeEecC
Q 041467 332 ELDNNLLNGSLPPEVGNLKNLLRLHIP------------EYPENLSFFELLNLSYNYFGSEVPT-KGVFNNKTRFSIIGN 398 (746)
Q Consensus 332 ~Ls~N~l~~~~p~~~~~l~~L~~L~lp------------~~~~~l~~L~~L~ls~N~l~~~~p~-~~~~~~~~~~~~~~n 398 (746)
++++|.+++..|..++.+++|+.|++. ..+..+++|+.|++++|++++.+|. ...+..+..+++.+|
T Consensus 431 ~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 510 (606)
T 3t6q_A 431 NLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHN 510 (606)
T ss_dssp ECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred ECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCC
Confidence 888888887778888888888888653 2345677888888888888877664 244566677777766
Q ss_pred C
Q 041467 399 G 399 (746)
Q Consensus 399 ~ 399 (746)
.
T Consensus 511 ~ 511 (606)
T 3t6q_A 511 R 511 (606)
T ss_dssp C
T ss_pred c
Confidence 3
No 13
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=2.3e-41 Score=390.79 Aligned_cols=386 Identities=19% Similarity=0.159 Sum_probs=298.4
Q ss_pred CCCcccccCccccccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCcc
Q 041467 3 SNNLLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDI 82 (746)
Q Consensus 3 ~n~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 82 (746)
+|++...++..+..+++|++|+|++|.+++..|.+|+++++|++|+|++|++++..|..|+++++|++|++++|.+.+..
T Consensus 42 ~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~l~ 121 (606)
T 3t6q_A 42 FNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSID 121 (606)
T ss_dssp TCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECTTSCCSCGG
T ss_pred CCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeeccccCcccCC
Confidence 45666666667778999999999999999888999999999999999999999888999999999999999999998877
Q ss_pred chhhcCCCCCCEEEccCCCCc----CcccCCCCCCEEeccCCCccc-----ccCCCCCc---------------------
Q 041467 83 LTEICSLFKLERLRIDCGGRI----DSLGHLKSLLLLSLAFNQFLS-----LSNASSLE--------------------- 132 (746)
Q Consensus 83 ~~~~~~l~~L~~L~l~~~~~~----~~~~~l~~L~~L~Ls~N~l~~-----l~~l~~L~--------------------- 132 (746)
+..+.++++|++|++++|... ..+..+++|+.|++++|++.. +..+++|+
T Consensus 122 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~~~~~~~~~~ 201 (606)
T 3t6q_A 122 FIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFDS 201 (606)
T ss_dssp GSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCCEECTTTTTT
T ss_pred cchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccCccChhHhhh
Confidence 888999999999999886432 445558888888888888732 33444444
Q ss_pred --------------------------------------------------------EeeCccCcccccCCccccCCCCCC
Q 041467 133 --------------------------------------------------------MIEFSRNQFSGGVSVDFSRLKNLS 156 (746)
Q Consensus 133 --------------------------------------------------------~L~Ls~N~l~~~~~~~~~~l~~L~ 156 (746)
.|++++|++++..+..|+.+++|+
T Consensus 202 ~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 281 (606)
T 3t6q_A 202 AVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQ 281 (606)
T ss_dssp CEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCTTTTTTCTTCS
T ss_pred ccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCHHHhccccCCC
Confidence 444444555555555578889999
Q ss_pred EEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCc-cccCCCCCC
Q 041467 157 WLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPH-GIRNLVNLN 235 (746)
Q Consensus 157 ~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~-~~~~l~~L~ 235 (746)
+|++++|.++. +|..+..+++|++|++++|.+++..|..+..++ +|+.|++++|.+.+.+|. .|.++++|+
T Consensus 282 ~L~l~~n~l~~-------lp~~l~~l~~L~~L~l~~n~l~~~~~~~~~~l~-~L~~L~l~~n~~~~~~~~~~~~~l~~L~ 353 (606)
T 3t6q_A 282 ELDLTATHLSE-------LPSGLVGLSTLKKLVLSANKFENLCQISASNFP-SLTHLSIKGNTKRLELGTGCLENLENLR 353 (606)
T ss_dssp EEECTTSCCSC-------CCSSCCSCTTCCEEECTTCCCSBGGGGCGGGCT-TCSEEECCSCSSCCBCCSSTTTTCTTCC
T ss_pred EEeccCCccCC-------CChhhcccccCCEEECccCCcCcCchhhhhccC-cCCEEECCCCCcccccchhhhhccCcCC
Confidence 99999999974 556678889999999999999877788888887 689999999888866665 488888888
Q ss_pred eeecccccceecC--CcCCCCCCCCceeecccccccccccccccc---cChHHhhhccCCCCCCcc-ccCCCCCCeeeec
Q 041467 236 WLTMESSQLIGTI--PPLIGETPNLQLLNIGGNHLQGSILSSLGN---LTLQTYLFNNLQGNIPSS-LANCKSLLGLSVS 309 (746)
Q Consensus 236 ~L~L~~N~l~~~~--p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~---l~~l~~l~n~l~~~~p~~-~~~l~~L~~L~Ls 309 (746)
+|++++|++.+.. |..++.+++|++|++++|.+.+..+..+.. |+.+++.+|.+.+..|.. |..+++|++|+++
T Consensus 354 ~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~ 433 (606)
T 3t6q_A 354 ELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLS 433 (606)
T ss_dssp EEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECT
T ss_pred EEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECC
Confidence 8888888887765 777888888888888888888776666544 444555577777766544 7888888888888
Q ss_pred CCcCccccchhhhhcccccceEEccCcccccc---CchhhhcccCCceeec---------CCCCCCCCCCCEEEccCCcC
Q 041467 310 HNKLTSTLPQQILSVTTLSLYLELDNNLLNGS---LPPEVGNLKNLLRLHI---------PEYPENLSFFELLNLSYNYF 377 (746)
Q Consensus 310 ~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~---~p~~~~~l~~L~~L~l---------p~~~~~l~~L~~L~ls~N~l 377 (746)
+|++++..|..+..+++| +.|++++|++++. .+..+..+++|+.|++ |..+..++.|+.|++++|++
T Consensus 434 ~n~l~~~~~~~~~~l~~L-~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l 512 (606)
T 3t6q_A 434 HSLLDISSEQLFDGLPAL-QHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRL 512 (606)
T ss_dssp TCCCBTTCTTTTTTCTTC-CEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred CCccCCcCHHHHhCCCCC-CEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCcc
Confidence 888887777777888888 5788888888762 3356778888888754 45667778888888888888
Q ss_pred cccCCCC-CccCCCCeeeEecC
Q 041467 378 GSEVPTK-GVFNNKTRFSIIGN 398 (746)
Q Consensus 378 ~~~~p~~-~~~~~~~~~~~~~n 398 (746)
++.+|.. .....+ .+++.+|
T Consensus 513 ~~~~~~~l~~l~~L-~L~L~~N 533 (606)
T 3t6q_A 513 TSSSIEALSHLKGI-YLNLASN 533 (606)
T ss_dssp CGGGGGGGTTCCSC-EEECCSS
T ss_pred CcCChhHhCccccc-EEECcCC
Confidence 8776632 223444 5555555
No 14
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=1.5e-43 Score=381.13 Aligned_cols=176 Identities=20% Similarity=0.260 Sum_probs=158.3
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhh
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKA 549 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~ 549 (746)
...|+..+.||+|+||.||+ ||||++........+.+.+|+++|++++|||||+++++|.+.+..|+||||
T Consensus 150 ~~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy 229 (423)
T 4fie_A 150 RSYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 229 (423)
T ss_dssp GGTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hHhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeC
Confidence 35699999999999999997 999999766555566799999999999999999999999999999999999
Q ss_pred ccCCccc----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCc
Q 041467 550 ISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTA 625 (746)
Q Consensus 550 ~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~ 625 (746)
|++|+|. ...+++.++..|+.||+.||+|||++ +||||||||+|||++.+|.+||+|||+|+.+....
T Consensus 230 ~~gG~L~~~i~~~~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~----- 301 (423)
T 4fie_A 230 LEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV----- 301 (423)
T ss_dssp CTTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCSSC-----
T ss_pred CCCCcHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCCCC-----
Confidence 9999986 56799999999999999999999999 99999999999999999999999999998764322
Q ss_pred ccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 626 ETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 626 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
....+.+||+.|||||++.+..|+. ++||||+||++|
T Consensus 302 ---~~~~~~~GTp~YmAPEvl~~~~y~~---~~DiWSlGvily 338 (423)
T 4fie_A 302 ---PRRKSLVGTPYWMAPELISRLPYGP---EVDIWSLGIMVI 338 (423)
T ss_dssp ---CCBCCCEECTTTCCHHHHTTCCBCT---HHHHHHHHHHHH
T ss_pred ---ccccccccCcCcCCHHHHCCCCCCc---HHHHHHHHHHHH
Confidence 2234578999999999999887755 499999999999
No 15
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=2.3e-44 Score=372.68 Aligned_cols=175 Identities=23% Similarity=0.277 Sum_probs=147.6
Q ss_pred cCCCCCCeEeecCCeeEEE------------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccc
Q 041467 480 NNFSPANKIREGGFNIVYN------------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~------------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~l 545 (746)
++|+..+.||+|+||+||+ ||||++.... .....++.+|+++|++++|||||++++++.+.+..|+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 5799999999999999995 8999986542 2234468899999999999999999999999999999
Q ss_pred hhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCC
Q 041467 546 DFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620 (746)
Q Consensus 546 v~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~ 620 (746)
|||||++|+|. ...+++.++..++.||+.||+|||++ +||||||||+|||++.+|.+||+|||+|+......
T Consensus 104 vmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~ 180 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE 180 (304)
T ss_dssp EECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC-----
T ss_pred EEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecccccceeccCCC
Confidence 99999999996 46799999999999999999999999 99999999999999999999999999998653221
Q ss_pred CCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 621 PGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 621 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
....+.+||+.|||||++.+..|+.+ +||||+||++|
T Consensus 181 --------~~~~~~~GT~~YmAPE~~~~~~y~~~---~DiwSlGvily 217 (304)
T 3ubd_A 181 --------KKAYSFCGTVEYMAPEVVNRRGHTQS---ADWWSFGVLMF 217 (304)
T ss_dssp --------CCCCSCCCCGGGCCHHHHHTSCCCTH---HHHHHHHHHHH
T ss_pred --------ccccccccCcccCCHHHhccCCCCCC---CcccchHHHHH
Confidence 22335789999999999998877654 99999999999
No 16
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=2.4e-43 Score=369.34 Aligned_cols=177 Identities=19% Similarity=0.228 Sum_probs=149.1
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhh
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFK 548 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e 548 (746)
..+.|+..+.||+|+||+||+ ||||+++... ...+|++++++++|||||+++++|.+.+..|+|||
T Consensus 56 ~~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~-----~~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmE 130 (336)
T 4g3f_A 56 EVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEV-----FRVEELVACAGLSSPRIVPLYGAVREGPWVNIFME 130 (336)
T ss_dssp TTTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT-----CCTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred chhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHH-----hHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEe
Confidence 345688889999999999997 9999986432 13579999999999999999999999999999999
Q ss_pred hccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCC-cEEEccccccccccCCCCC
Q 041467 549 AISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDV-VTHVGDLGLAKFLYGYEPG 622 (746)
Q Consensus 549 ~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~-~~ki~DfGla~~~~~~~~~ 622 (746)
||++|+|. ...+++.++..|+.||+.||+|||++ +||||||||+|||++.+| ++||+|||+|+.+......
T Consensus 131 y~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~ 207 (336)
T 4g3f_A 131 LLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLG 207 (336)
T ss_dssp CCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC------
T ss_pred ccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcc
Confidence 99999996 45799999999999999999999999 999999999999999887 6999999999987543221
Q ss_pred CCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 623 TTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 623 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
. ........+||+.|||||++.+..|+. ++||||+||++|
T Consensus 208 ~---~~~~~~~~~GT~~YmAPE~~~~~~y~~---~~DiwSlGvily 247 (336)
T 4g3f_A 208 K---SLLTGDYIPGTETHMAPEVVMGKPCDA---KVDIWSSCCMML 247 (336)
T ss_dssp ---------CCCCCCGGGCCHHHHTTCCCCT---HHHHHHHHHHHH
T ss_pred c---ceecCCccccCccccCHHHHCCCCCCc---HHHHHHHHHHHH
Confidence 1 111223468999999999999987765 499999999999
No 17
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=7.6e-42 Score=395.40 Aligned_cols=337 Identities=21% Similarity=0.276 Sum_probs=293.6
Q ss_pred cCcccCchhhhCCccCcEEecccCcCCcc-----------------CCcccc--CCCCCCeeeCcCCCCCCccchhhcCC
Q 041467 29 GFNGEIPHQIGRLISLERLILSNNSFSCA-----------------IPANLS--SGSNLIKLSTDSNNLVRDILTEICSL 89 (746)
Q Consensus 29 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-----------------~p~~~~--~l~~L~~L~L~~N~l~~~~~~~~~~l 89 (746)
++++ +|++|+++++|++|+|++|.|++. +|..++ ++++|++|+|++|.+.+.+|..++++
T Consensus 194 ~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l 272 (636)
T 4eco_A 194 NITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKAL 272 (636)
T ss_dssp EEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTC
T ss_pred CCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcC
Confidence 3445 899999999999999999999986 999999 99999999999999999999999999
Q ss_pred CCCCEEEccCCC-C-----cCcccCC------CCCCEEeccCCCcc------cccCCCCCcEeeCccCcccccCCccccC
Q 041467 90 FKLERLRIDCGG-R-----IDSLGHL------KSLLLLSLAFNQFL------SLSNASSLEMIEFSRNQFSGGVSVDFSR 151 (746)
Q Consensus 90 ~~L~~L~l~~~~-~-----~~~~~~l------~~L~~L~Ls~N~l~------~l~~l~~L~~L~Ls~N~l~~~~~~~~~~ 151 (746)
++|++|+++.|. . +..++++ ++|+.|+|++|++. .+.++++|+.|+|++|+++|.+| .|+.
T Consensus 273 ~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~ 351 (636)
T 4eco_A 273 PEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLKTFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGS 351 (636)
T ss_dssp SSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCSSCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEE
T ss_pred CCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCCccCchhhhccCCCCCEEeCcCCcCccchh-hhCC
Confidence 999999999886 2 2345555 99999999999994 46678999999999999998899 9999
Q ss_pred CCCCCEEEccCCCCCCCCCCCccccccccCCCC-CCEEEcccccccccCChhhhhcc-cccceEEcccCcccccCCcccc
Q 041467 152 LKNLSWLNLGVNNLGSGTANELDFINLLTNCSK-LERLYFNRNGFEGVLPHSIANLS-STIKQIAMGSNRISSTIPHGIR 229 (746)
Q Consensus 152 l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~-L~~L~Ls~N~l~~~~p~~~~~l~-~~L~~L~l~~N~i~~~~p~~~~ 229 (746)
+++|++|+|++|.++. +|..+..+++ |++|++++|.++ .+|..+..+. .+|+.|++++|++++.+|..|.
T Consensus 352 l~~L~~L~L~~N~l~~-------lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~ 423 (636)
T 4eco_A 352 EIKLASLNLAYNQITE-------IPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFD 423 (636)
T ss_dssp EEEESEEECCSSEEEE-------CCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSC
T ss_pred CCCCCEEECCCCcccc-------ccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhc
Confidence 9999999999999973 5667888999 999999999998 7888776643 2699999999999999999998
Q ss_pred -------CCCCCCeeecccccceecCCcCCCCCCCCceeeccccccccccccccc----------ccChHHhhhccCCCC
Q 041467 230 -------NLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLG----------NLTLQTYLFNNLQGN 292 (746)
Q Consensus 230 -------~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~----------~l~~l~~l~n~l~~~ 292 (746)
.+.+|++|+|++|++.+..+..+..+++|++|+|++|+++...+..+. +|+.|++.+|+++ .
T Consensus 424 ~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ 502 (636)
T 4eco_A 424 PLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLTEIPKNSLKDENENFKNTYLLTSIDLRFNKLT-K 502 (636)
T ss_dssp TTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCSBCCSSSSEETTEECTTGGGCCEEECCSSCCC-B
T ss_pred ccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCCCcCHHHhccccccccccCCccEEECcCCcCC-c
Confidence 888999999999999954444566799999999999999944333333 6777778899999 7
Q ss_pred CCcccc--CCCCCCeeeecCCcCccccchhhhhcccccceEEc------cCccccccCchhhhcccCCceeec-------
Q 041467 293 IPSSLA--NCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLEL------DNNLLNGSLPPEVGNLKNLLRLHI------- 357 (746)
Q Consensus 293 ~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~L------s~N~l~~~~p~~~~~l~~L~~L~l------- 357 (746)
+|..+. .+++|+.|+|++|+|++ +|..++.+++| +.|+| ++|++.+.+|.+++++++|+.|++
T Consensus 503 lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L-~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~ 580 (636)
T 4eco_A 503 LSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTL-KGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDIRK 580 (636)
T ss_dssp CCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSC-CEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCCCB
T ss_pred cChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCC-CEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcCCc
Confidence 888887 99999999999999997 99999999999 68999 568899999999999999999965
Q ss_pred -CCCCCCCCCCCEEEccCCcCccc
Q 041467 358 -PEYPENLSFFELLNLSYNYFGSE 380 (746)
Q Consensus 358 -p~~~~~l~~L~~L~ls~N~l~~~ 380 (746)
|..+. +.|+.||+++|++...
T Consensus 581 ip~~~~--~~L~~L~Ls~N~l~~~ 602 (636)
T 4eco_A 581 VNEKIT--PNISVLDIKDNPNISI 602 (636)
T ss_dssp CCSCCC--TTCCEEECCSCTTCEE
T ss_pred cCHhHh--CcCCEEECcCCCCccc
Confidence 44433 7899999999988753
No 18
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=1.2e-42 Score=358.14 Aligned_cols=171 Identities=22% Similarity=0.353 Sum_probs=144.6
Q ss_pred CCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEec----CCcccchh
Q 041467 483 SPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSS----IDFEGFDF 547 (746)
Q Consensus 483 ~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~----~~~~~lv~ 547 (746)
...+.||+|+||+||+ ||||++.... ....+.|.+|+++|++++|||||+++++|.+ ....|+||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 4567899999999997 9999986442 3345679999999999999999999999875 34579999
Q ss_pred hhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeC-CCCcEEEccccccccccCCCC
Q 041467 548 KAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLD-QDVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 548 e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~-~~~~~ki~DfGla~~~~~~~~ 621 (746)
|||++|+|. ...+++..+..++.||+.||+|||++ .++||||||||+|||++ .++.+||+|||+|+....
T Consensus 109 Ey~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~-~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~--- 184 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRA--- 184 (290)
T ss_dssp ECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCT---
T ss_pred eCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CCCEEecccChhheeEECCCCCEEEEeCcCCEeCCC---
Confidence 999999996 46799999999999999999999998 11399999999999998 479999999999986321
Q ss_pred CCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
....+.+||+.|||||++.+ +| +.++|||||||++|
T Consensus 185 -------~~~~~~~GTp~YmAPE~~~~-~y---~~~~DiwSlGvily 220 (290)
T 3fpq_A 185 -------SFAKAVIGTPEFMAPEMYEE-KY---DESVDVYAFGMCML 220 (290)
T ss_dssp -------TSBEESCSSCCCCCGGGGGT-CC---CTHHHHHHHHHHHH
T ss_pred -------CccCCcccCccccCHHHcCC-CC---CcHHHHHHHHHHHH
Confidence 12335789999999999865 35 44699999999999
No 19
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=4.1e-41 Score=402.28 Aligned_cols=394 Identities=18% Similarity=0.191 Sum_probs=222.0
Q ss_pred CcccccCccccccccccEEecccCcCcccC-chhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccc
Q 041467 5 NLLQYSKPLCILRTFLRYINLVNNGFNGEI-PHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDIL 83 (746)
Q Consensus 5 ~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~ 83 (746)
.+...++..+..+++|++|||++|.+.+.+ |.+|+++++|++|+|++|.|++..|..|+++++|++|+|++|.+.+.+|
T Consensus 35 ~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~ 114 (844)
T 3j0a_A 35 YIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVL 114 (844)
T ss_dssp CCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCS
T ss_pred cCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCcccc
Confidence 333333444444555555555555333333 4555555555555555555555555555555555555555555554444
Q ss_pred hh--hcCCCCCCEEEccCCCCc-----CcccCCCCCCEEeccCCCccc-----ccCC--CCCcEeeCccCcccccCCccc
Q 041467 84 TE--ICSLFKLERLRIDCGGRI-----DSLGHLKSLLLLSLAFNQFLS-----LSNA--SSLEMIEFSRNQFSGGVSVDF 149 (746)
Q Consensus 84 ~~--~~~l~~L~~L~l~~~~~~-----~~~~~l~~L~~L~Ls~N~l~~-----l~~l--~~L~~L~Ls~N~l~~~~~~~~ 149 (746)
.. +.++++|++|+|+.|... ..|+++++|+.|+|++|.+.. +..+ ++|+.|+|++|.+.+..|..+
T Consensus 115 ~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~ 194 (844)
T 3j0a_A 115 KDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDW 194 (844)
T ss_dssp TTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECCSBSCCCCCCCC
T ss_pred cCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECCCCccccccccch
Confidence 33 555555555555553321 235555555555555555521 1111 333333333333333333333
Q ss_pred cCCCC------CCEEEccCCCCCCCCCCCc--------------------------------------------------
Q 041467 150 SRLKN------LSWLNLGVNNLGSGTANEL-------------------------------------------------- 173 (746)
Q Consensus 150 ~~l~~------L~~L~Ls~N~l~~~~~~~~-------------------------------------------------- 173 (746)
+.+++ |+.|+|++|.+++..+..+
T Consensus 195 ~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls 274 (844)
T 3j0a_A 195 GKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLS 274 (844)
T ss_dssp CSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECT
T ss_pred hhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhccccCCccEEECC
Confidence 32222 4555555554322111000
Q ss_pred ------cccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceec
Q 041467 174 ------DFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGT 247 (746)
Q Consensus 174 ------~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~ 247 (746)
..+..|..+++|+.|+|++|++++..|..|..+. +|+.|++++|++++..|..|.++++|++|++++|++.+.
T Consensus 275 ~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~ 353 (844)
T 3j0a_A 275 HGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLD-NLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAII 353 (844)
T ss_dssp TCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCS-SCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCC
T ss_pred CCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCC-CCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCcc
Confidence 1233456667777777777777766666676666 577777777777766677777777777777777777666
Q ss_pred CCcCCCCCCCCceeeccccccccccc------------------c-------------------------cccccChHHh
Q 041467 248 IPPLIGETPNLQLLNIGGNHLQGSIL------------------S-------------------------SLGNLTLQTY 284 (746)
Q Consensus 248 ~p~~~~~l~~L~~L~Ls~N~l~~~~~------------------~-------------------------~l~~l~~l~~ 284 (746)
.+..|..+++|+.|+|++|.+++... . .+.+|+.|++
T Consensus 354 ~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~L~~L~l~~N~l~~l~~~~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~L 433 (844)
T 3j0a_A 354 QDQTFKFLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSENRLENLDILYFLLRVPHLQILIL 433 (844)
T ss_dssp CSSCSCSCCCCCEEEEETCCSCCCSSCCSCSEEEEESCCCCCCCCCCTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEE
T ss_pred ChhhhcCCCCCCEEECCCCCCCcccCCCCcchhccCCCCcccccccccccceeecccCccccCchhhhhhcCCccceeeC
Confidence 66667777777777777777664211 0 1112222222
Q ss_pred hhccCCCCCCc-cccCCCCCCeeeecCCcCc-----cccchhhhhcccccceEEccCccccccCchhhhcccCCceeecC
Q 041467 285 LFNNLQGNIPS-SLANCKSLLGLSVSHNKLT-----STLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNLKNLLRLHIP 358 (746)
Q Consensus 285 l~n~l~~~~p~-~~~~l~~L~~L~Ls~N~l~-----~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~lp 358 (746)
.+|++++..+. .+..+++|+.|+|++|.++ +..|..+..+++| +.|+|++|++++..|..|..+++|+.|++.
T Consensus 434 s~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L-~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 512 (844)
T 3j0a_A 434 NQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHL-QVLYLNHNYLNSLPPGVFSHLTALRGLSLN 512 (844)
T ss_dssp ESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCE-ECCCCCHHHHTTCCTTSSSSCCSCSEEEEE
T ss_pred CCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccc-cEEECCCCcccccChhHccchhhhheeECC
Confidence 23333332222 2333455555555555554 2233445667777 578888888887777778888888888652
Q ss_pred C--------CCCCCCCCCEEEccCCcCcccCCCCCccCCCCeeeEecCCCcCC
Q 041467 359 E--------YPENLSFFELLNLSYNYFGSEVPTKGVFNNKTRFSIIGNGKLCG 403 (746)
Q Consensus 359 ~--------~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~l~~ 403 (746)
. .... ++|+.||+++|++++.+|.. +.++..+++.+|++.|.
T Consensus 513 ~N~l~~l~~~~~~-~~L~~L~Ls~N~l~~~~~~~--~~~L~~l~l~~Np~~C~ 562 (844)
T 3j0a_A 513 SNRLTVLSHNDLP-ANLEILDISRNQLLAPNPDV--FVSLSVLDITHNKFICE 562 (844)
T ss_dssp SCCCSSCCCCCCC-SCCCEEEEEEECCCCCCSCC--CSSCCEEEEEEECCCCS
T ss_pred CCCCCccChhhhh-ccccEEECCCCcCCCCChhH--hCCcCEEEecCCCcccc
Confidence 2 1111 67888888888888887753 56788999999999884
No 20
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=6.9e-43 Score=365.10 Aligned_cols=236 Identities=18% Similarity=0.184 Sum_probs=174.0
Q ss_pred cCCCCCCeEeecCCeeEEE-------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCC----cccchhh
Q 041467 480 NNFSPANKIREGGFNIVYN-------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSID----FEGFDFK 548 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~-------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~----~~~lv~e 548 (746)
.+|...+.||+|+||+||+ ||||++...... ...+++|+..+.+++|||||+++|+|.+.+ ..++|||
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~~g~~VAvK~l~~~~~~-~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~E 81 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSD 81 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEECCEEEEEEEECccchh-hHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEec
Confidence 4577889999999999997 999998654322 223456777888999999999999998754 4689999
Q ss_pred hccCCccc----ccCCCHHHHHHHHHHHHHHHHHHHhc-----CCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCC
Q 041467 549 AISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHH-----CQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGY 619 (746)
Q Consensus 549 ~~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~-----~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~ 619 (746)
||++|+|. ...++|.++.+++.|+|+||+|||++ +.++||||||||+|||+|.++++||+|||+|+.....
T Consensus 82 y~~~gsL~~~l~~~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~ 161 (303)
T 3hmm_A 82 YHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSA 161 (303)
T ss_dssp CCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEETT
T ss_pred CCCCCcHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccccCC
Confidence 99999996 56799999999999999999999986 3568999999999999999999999999999876433
Q ss_pred CCCCCccccccccccccccccccccccccccc---ccCCCccceeeccceeecccccc-----------c----------
Q 041467 620 EPGTTAETASSSIGINGTVGYVAPVIIAARNL---ENREKRHTVMSFPQRFALNEKKQ-----------N---------- 675 (746)
Q Consensus 620 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~---~~~~~~~DiwSlG~i~~~~~~~~-----------~---------- 675 (746)
... ........+||++|||||++.+... ..++.++|||||||++|...... .
T Consensus 162 ~~~----~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~ 237 (303)
T 3hmm_A 162 TDT----IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPS 237 (303)
T ss_dssp TTE----ESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCC
T ss_pred CCc----eeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccch
Confidence 221 1122334689999999999986521 12345699999999999321110 0
Q ss_pred -cch----hhc--cc-cC----CCccHHHHHHhhCCCCCCCCC-CCCccchhhhcccC
Q 041467 676 -KSI----LKS--AG-IK----GKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLRL 720 (746)
Q Consensus 676 -~~i----~~~--~~-~~----~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~ 720 (746)
..+ ... .+ .| ..+..+.+..++..||...|+ ||++.++...++++
T Consensus 238 ~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l 295 (303)
T 3hmm_A 238 VEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL 295 (303)
T ss_dssp HHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHH
Confidence 000 000 01 11 112345677888889988898 99998877665544
No 21
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=2e-40 Score=382.98 Aligned_cols=392 Identities=18% Similarity=0.142 Sum_probs=232.7
Q ss_pred cccccCccccccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchh
Q 041467 6 LLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTE 85 (746)
Q Consensus 6 ~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~ 85 (746)
+...++..+..+++|++|+|++|.+++..|.+|+++++|++|+|++|++++..|..|+++++|++|+|++|.+.+..+..
T Consensus 44 l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~ 123 (606)
T 3vq2_A 44 LKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFP 123 (606)
T ss_dssp CCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSC
T ss_pred cCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCccccccccc
Confidence 33333334445555555555555555555555555555555555555555555555555555555555555555544455
Q ss_pred hcCCCCCCEEEccCCCC-----cCcccCCCCCCEEeccCCCcccc-----cCCCC----CcEeeCccCcccccCCccccC
Q 041467 86 ICSLFKLERLRIDCGGR-----IDSLGHLKSLLLLSLAFNQFLSL-----SNASS----LEMIEFSRNQFSGGVSVDFSR 151 (746)
Q Consensus 86 ~~~l~~L~~L~l~~~~~-----~~~~~~l~~L~~L~Ls~N~l~~l-----~~l~~----L~~L~Ls~N~l~~~~~~~~~~ 151 (746)
++++++|++|+++.|.. +..++++++|+.|+|++|++..+ ..+++ +..|++++|.+++..+..|..
T Consensus 124 ~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~ 203 (606)
T 3vq2_A 124 IGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQG 203 (606)
T ss_dssp CTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTT
T ss_pred cCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCCCcceeCcccccC
Confidence 55555555555555332 23455555555555555555321 11111 223444444444333333322
Q ss_pred CCCCCEEEccCCCCCCC--------------------------------------------------CCC----------
Q 041467 152 LKNLSWLNLGVNNLGSG--------------------------------------------------TAN---------- 171 (746)
Q Consensus 152 l~~L~~L~Ls~N~l~~~--------------------------------------------------~~~---------- 171 (746)
. +|+.|++++|.+.+. ...
T Consensus 204 ~-~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~ 282 (606)
T 3vq2_A 204 I-KLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVKFH 282 (606)
T ss_dssp C-EEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGSCG
T ss_pred c-eeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccccccccccccccc
Confidence 2 344444444433200 000
Q ss_pred --------------CccccccccCCCCCCEEEcccccccccCCh--------------------hhhhcccccceEEccc
Q 041467 172 --------------ELDFINLLTNCSKLERLYFNRNGFEGVLPH--------------------SIANLSSTIKQIAMGS 217 (746)
Q Consensus 172 --------------~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~--------------------~~~~l~~~L~~L~l~~ 217 (746)
...++ .+..+++|+.|++++|.+ +.+|. .+..++ +|+.|++++
T Consensus 283 ~l~~L~~L~l~~~~~~~l~-~l~~~~~L~~L~l~~n~l-~~lp~~~l~~L~~L~l~~n~~~~~~~~~~l~-~L~~L~ls~ 359 (606)
T 3vq2_A 283 CLANVSAMSLAGVSIKYLE-DVPKHFKWQSLSIIRCQL-KQFPTLDLPFLKSLTLTMNKGSISFKKVALP-SLSYLDLSR 359 (606)
T ss_dssp GGTTCSEEEEESCCCCCCC-CCCTTCCCSEEEEESCCC-SSCCCCCCSSCCEEEEESCSSCEECCCCCCT-TCCEEECCS
T ss_pred cCCCCCEEEecCccchhhh-hccccccCCEEEcccccC-cccccCCCCccceeeccCCcCccchhhccCC-CCCEEECcC
Confidence 00011 244555666677766666 35552 223333 566666667
Q ss_pred Cccccc--CCccccCCCCCCeeecccccceecCCcCCCCCCCCceeeccccccccccc-ccc---cccChHHhhhccCCC
Q 041467 218 NRISST--IPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSIL-SSL---GNLTLQTYLFNNLQG 291 (746)
Q Consensus 218 N~i~~~--~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~-~~l---~~l~~l~~l~n~l~~ 291 (746)
|++++. +|..+..+++|++|++++|.+.+ +|..+..+++|+.|++++|++.+..+ ..+ .+|+.+++.+|.+.+
T Consensus 360 n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~ 438 (606)
T 3vq2_A 360 NALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKI 438 (606)
T ss_dssp SCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEE
T ss_pred CccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCc
Confidence 776654 36677777777777777777764 55777778888888888888777655 333 444555555777877
Q ss_pred CCCccccCCCCCCeeeecCCcCcc-ccchhhhhcccccceEEccCccccccCchhhhcccCCceeec---------CCCC
Q 041467 292 NIPSSLANCKSLLGLSVSHNKLTS-TLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNLKNLLRLHI---------PEYP 361 (746)
Q Consensus 292 ~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l---------p~~~ 361 (746)
..|..|+.+++|++|++++|++++ .+|..+..+++| +.|++++|++++..|..++++++|+.|++ |..+
T Consensus 439 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L-~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 517 (606)
T 3vq2_A 439 DFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNL-TFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHY 517 (606)
T ss_dssp CCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTC-CEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGT
T ss_pred cchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCC-CEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHc
Confidence 778888888888888888888876 367777778887 57888888888777778888888888754 4456
Q ss_pred CCCCCCCEEEccCCcCcccCCCCCccC-CCCeeeEecCCCcCC
Q 041467 362 ENLSFFELLNLSYNYFGSEVPTKGVFN-NKTRFSIIGNGKLCG 403 (746)
Q Consensus 362 ~~l~~L~~L~ls~N~l~~~~p~~~~~~-~~~~~~~~~n~~l~~ 403 (746)
..+++|+.||+++|+++..++....+. ++..+++.+|+..|.
T Consensus 518 ~~l~~L~~L~l~~N~l~~~p~~~~~l~~~L~~l~l~~N~~~c~ 560 (606)
T 3vq2_A 518 NQLYSLSTLDCSFNRIETSKGILQHFPKSLAFFNLTNNSVACI 560 (606)
T ss_dssp TTCTTCCEEECTTSCCCCEESCGGGSCTTCCEEECCSCCCCCS
T ss_pred cCCCcCCEEECCCCcCcccCHhHhhhcccCcEEEccCCCcccC
Confidence 677788888888888875333322333 467777888877664
No 22
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=9.5e-43 Score=362.22 Aligned_cols=184 Identities=24% Similarity=0.392 Sum_probs=141.3
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCC-------
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSID------- 541 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~------- 541 (746)
.++|+..+.||+|+||+||+ ||||++.... ....+.+.+|+++|++++|||||+++++|.+.+
T Consensus 4 l~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~ 83 (299)
T 4g31_A 4 LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQP 83 (299)
T ss_dssp HHHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC-------
T ss_pred chhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccc
Confidence 35689999999999999997 9999986543 334567999999999999999999999987644
Q ss_pred -----cccchhhhccCCccc--------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEc
Q 041467 542 -----FEGFDFKAISNGQLR--------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVG 608 (746)
Q Consensus 542 -----~~~lv~e~~~~g~l~--------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~ 608 (746)
..|+|||||++|+|. ....++..++.++.||+.||+|||++ +||||||||+|||++.++.+||+
T Consensus 84 ~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl~ 160 (299)
T 4g31_A 84 SSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVG 160 (299)
T ss_dssp ---CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEEC
T ss_pred cCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEEc
Confidence 368999999999986 12345667899999999999999999 99999999999999999999999
Q ss_pred cccccccccCCCCCCC----cccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 609 DLGLAKFLYGYEPGTT----AETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 609 DfGla~~~~~~~~~~~----~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
|||+|+.+........ .......++.+||+.|||||++.+..|+. ++||||+||++|
T Consensus 161 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~---~~DiwSlGvily 221 (299)
T 4g31_A 161 DFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSH---KVDIFSLGLILF 221 (299)
T ss_dssp CCCCC--------------------------CCCTTSCHHHHTTCCCCT---HHHHHHHHHHHH
T ss_pred cCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCC---HHHHHHHHHHHH
Confidence 9999998754332111 01112234578999999999999887755 599999999999
No 23
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=2e-39 Score=379.84 Aligned_cols=386 Identities=19% Similarity=0.163 Sum_probs=221.1
Q ss_pred cccccCccccccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchh
Q 041467 6 LLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTE 85 (746)
Q Consensus 6 ~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~ 85 (746)
+...++..+..+++|++|+|++|.+++..|..|+++++|++|+|++|++++..+..|+++++|++|+|++|.+.+..|..
T Consensus 37 l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 116 (680)
T 1ziw_A 37 LRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNP 116 (680)
T ss_dssp CCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCT
T ss_pred CCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCccChhH
Confidence 33333334444555666666666665555556666666666666666665433334566666666666666655544455
Q ss_pred hcCCCCCCEEEccCCCCc----CcccCCCCCCEEeccCCCcccc-------cCCCCCcEeeCccCcccccCCccccCC--
Q 041467 86 ICSLFKLERLRIDCGGRI----DSLGHLKSLLLLSLAFNQFLSL-------SNASSLEMIEFSRNQFSGGVSVDFSRL-- 152 (746)
Q Consensus 86 ~~~l~~L~~L~l~~~~~~----~~~~~l~~L~~L~Ls~N~l~~l-------~~l~~L~~L~Ls~N~l~~~~~~~~~~l-- 152 (746)
|+++++|++|+++.+... ..++++++|+.|++++|++..+ ..+++|+.|++++|++++..|..|..+
T Consensus 117 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~ 196 (680)
T 1ziw_A 117 FVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGR 196 (680)
T ss_dssp TTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSE
T ss_pred ccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcccccChhhhhhhhh
Confidence 666666666666554321 3345555666666666655322 133455555555555555544444332
Q ss_pred -------------------------CCCCEEEccCCCCCCCCCCCccccccccCCC--CCCEEEcccccccccCChhhhh
Q 041467 153 -------------------------KNLSWLNLGVNNLGSGTANELDFINLLTNCS--KLERLYFNRNGFEGVLPHSIAN 205 (746)
Q Consensus 153 -------------------------~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~--~L~~L~Ls~N~l~~~~p~~~~~ 205 (746)
++|+.|++++|.+++. .+..|.+++ +|+.|++++|++++..|..|..
T Consensus 197 L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~------~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~ 270 (680)
T 1ziw_A 197 LFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTT------SNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAW 270 (680)
T ss_dssp ECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEE------CTTTTGGGGGSCCCEEECTTSCCCEECTTTTTT
T ss_pred hhhhhccccccChhhHHHHHHHhhhccccEEEccCCccccc------ChhHhhccCcCCCCEEECCCCCcCccCcccccC
Confidence 2233333333333321 122233332 2555555555555555555555
Q ss_pred cccccceEEcccCcccccCCcccc---------------------------------CCCCCCeeecccccceecCCcCC
Q 041467 206 LSSTIKQIAMGSNRISSTIPHGIR---------------------------------NLVNLNWLTMESSQLIGTIPPLI 252 (746)
Q Consensus 206 l~~~L~~L~l~~N~i~~~~p~~~~---------------------------------~l~~L~~L~L~~N~l~~~~p~~~ 252 (746)
++ +|+.|++++|++++..|..|. .+++|++|++++|++.+..|..|
T Consensus 271 l~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~ 349 (680)
T 1ziw_A 271 LP-QLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMF 349 (680)
T ss_dssp CT-TCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCTTTT
T ss_pred cc-cccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCCChhHh
Confidence 54 455555555555554444443 34444444444444444444445
Q ss_pred CCCCCCceeeccccccccccc--ccc-----cccChHHhhhccCCCCCCccccCCCCCCeeeecCCcCccccc-hhhhhc
Q 041467 253 GETPNLQLLNIGGNHLQGSIL--SSL-----GNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLP-QQILSV 324 (746)
Q Consensus 253 ~~l~~L~~L~Ls~N~l~~~~~--~~l-----~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l 324 (746)
.++++|++|++++|.+..... ..+ ..++.+++.+|++.+..|..|..+++|+.|+|++|++++.+| ..+..+
T Consensus 350 ~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l 429 (680)
T 1ziw_A 350 TGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGL 429 (680)
T ss_dssp TTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTC
T ss_pred ccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCc
Confidence 555555555555554332110 111 234445555677777778888888888888888888887666 567777
Q ss_pred ccccceEEccCccccccCchhhhcccCCceeec-----------CCCCCCCCCCCEEEccCCcCcccCCC-CCccCCCCe
Q 041467 325 TTLSLYLELDNNLLNGSLPPEVGNLKNLLRLHI-----------PEYPENLSFFELLNLSYNYFGSEVPT-KGVFNNKTR 392 (746)
Q Consensus 325 ~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l-----------p~~~~~l~~L~~L~ls~N~l~~~~p~-~~~~~~~~~ 392 (746)
..+ ++|++++|++++..+..|..+++|+.|++ |..+..+++|+.|++++|++++..|. ...+..+..
T Consensus 430 ~~L-~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~ 508 (680)
T 1ziw_A 430 ENI-FEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEI 508 (680)
T ss_dssp TTC-CEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred ccc-cEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhccccccCE
Confidence 777 57888888888877888888888888754 45566788888888888888876554 234566677
Q ss_pred eeEecCC
Q 041467 393 FSIIGNG 399 (746)
Q Consensus 393 ~~~~~n~ 399 (746)
+++.+|.
T Consensus 509 L~Ls~N~ 515 (680)
T 1ziw_A 509 LDLQHNN 515 (680)
T ss_dssp EECCSSC
T ss_pred EeCCCCC
Confidence 7776663
No 24
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=5.9e-43 Score=371.15 Aligned_cols=238 Identities=20% Similarity=0.200 Sum_probs=185.3
Q ss_pred cHHHHhhhhcCCCCCCeEeecCCeeEEE--------------EEeehhhhhh-hhhhHHHHHHHHHhhcCCC-CceeeEE
Q 041467 471 SHAELSKATNNFSPANKIREGGFNIVYN--------------VAMKVANLKQ-KEASRSFAAEFNALRNIRH-RNLIKII 534 (746)
Q Consensus 471 ~~~~~~~~~~~~~~~~~ig~g~~g~v~~--------------vavK~~~~~~-~~~~~~~~~E~~~l~~l~H-pnIv~l~ 534 (746)
+..++....++|+..+.||+|+||+||+ ||||++.... ....+.|.+|+++|++++| ||||+++
T Consensus 55 ~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~ 134 (353)
T 4ase_A 55 DASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLL 134 (353)
T ss_dssp CHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEE
T ss_pred CCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEE
Confidence 4455666678899999999999999996 8999886543 3345679999999999975 9999999
Q ss_pred EEEecC-CcccchhhhccCCccc---------------------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCC
Q 041467 535 TICSSI-DFEGFDFKAISNGQLR---------------------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDL 592 (746)
Q Consensus 535 ~~~~~~-~~~~lv~e~~~~g~l~---------------------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDl 592 (746)
|+|... +..++|||||++|+|. ...+++.++..++.|||+||+|||++ +||||||
T Consensus 135 g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRDL 211 (353)
T 4ase_A 135 GACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDL 211 (353)
T ss_dssp EEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCC
T ss_pred EEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCcc
Confidence 999765 5689999999999985 12379999999999999999999999 9999999
Q ss_pred CCCCeeeCCCCcEEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeeccc-
Q 041467 593 KPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNE- 671 (746)
Q Consensus 593 kp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~- 671 (746)
||+|||+++++.+||+|||+|+.+..... .......+||+.|||||++.+..|+.+ +|||||||++|...
T Consensus 212 K~~NILl~~~~~vKi~DFGlar~~~~~~~------~~~~~~~~gt~~ymAPE~l~~~~y~~k---sDVwS~Gv~l~El~t 282 (353)
T 4ase_A 212 AARNILLSEKNVVKICDFGLARDIYKDPD------YVRKGDARLPLKWMAPETIFDRVYTIQ---SDVWSFGVLLWEIFS 282 (353)
T ss_dssp SGGGEEECGGGCEEECCCGGGSCTTTCTT------SEEETTEEECGGGCCHHHHHHCCCCHH---HHHHHHHHHHHHHTT
T ss_pred CccceeeCCCCCEEECcchhhhhcccCCC------ceeeccccccccccCHHHHhcCCCCCc---ccEeehHHHHHHHHh
Confidence 99999999999999999999997643322 122334789999999999998887655 99999999998221
Q ss_pred -ccc-------cc---chhhc--cccCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhcccC
Q 041467 672 -KKQ-------NK---SILKS--AGIKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLRL 720 (746)
Q Consensus 672 -~~~-------~~---~i~~~--~~~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~ 720 (746)
... .. .++.. .+..++.+.+.+..++..||...|+ ||++.++...++.+
T Consensus 283 ~G~~Pf~~~~~~~~~~~~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~l 345 (353)
T 4ase_A 283 LGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNL 345 (353)
T ss_dssp TSCCSSTTCCCSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence 111 01 11111 1222244556677777778888888 99988877655544
No 25
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=1.9e-40 Score=390.10 Aligned_cols=373 Identities=16% Similarity=0.178 Sum_probs=313.4
Q ss_pred cCccccccccccEEecccCcCcccCchhhhCCccCcEEec-ccCcCCcc-------------------------------
Q 041467 10 SKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLIL-SNNSFSCA------------------------------- 57 (746)
Q Consensus 10 ~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L-s~N~l~~~------------------------------- 57 (746)
+.-.|..-.+++.|+|++|.+.|.+|++|++|++|++||| ++|.++|.
T Consensus 315 ~GV~C~~~~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~ 394 (876)
T 4ecn_A 315 PGVDLDNNGRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDY 394 (876)
T ss_dssp TTEEECTTSCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCC
T ss_pred CceEecCCCCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhcc
Confidence 3334443467999999999999999999999999999999 77765444
Q ss_pred ---------------------------------------------CCccccCCCCCCeeeCcCCCCCC------------
Q 041467 58 ---------------------------------------------IPANLSSGSNLIKLSTDSNNLVR------------ 80 (746)
Q Consensus 58 ---------------------------------------------~p~~~~~l~~L~~L~L~~N~l~~------------ 80 (746)
+|..|+++++|+.|+|++|.+.+
T Consensus 395 ~~~~~~s~l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~ 474 (876)
T 4ecn_A 395 DQRLNLSDLLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANS 474 (876)
T ss_dssp CGGGGSCHHHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTS
T ss_pred CcchhhhHHHHHHhhhCccccccccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCccccccccccc
Confidence 88899999999999999999988
Q ss_pred -----ccchhhc--CCCCCCEEEccCCC----CcCcccCCCCCCEEeccCCC-ccc------c-------cCCCCCcEee
Q 041467 81 -----DILTEIC--SLFKLERLRIDCGG----RIDSLGHLKSLLLLSLAFNQ-FLS------L-------SNASSLEMIE 135 (746)
Q Consensus 81 -----~~~~~~~--~l~~L~~L~l~~~~----~~~~~~~l~~L~~L~Ls~N~-l~~------l-------~~l~~L~~L~ 135 (746)
.+|..++ ++++|+.|+|+.|. .+..++++++|+.|+|++|+ +.. + ..+++|+.|+
T Consensus 475 n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~ 554 (876)
T 4ecn_A 475 DYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFY 554 (876)
T ss_dssp HHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEE
T ss_pred ccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEE
Confidence 3899988 99999999998864 34678999999999999998 642 2 3456999999
Q ss_pred CccCcccccCCc--cccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhcccc-cce
Q 041467 136 FSRNQFSGGVSV--DFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSST-IKQ 212 (746)
Q Consensus 136 Ls~N~l~~~~~~--~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~-L~~ 212 (746)
|++|+++ .+|. .|+.+++|+.|+|++|.++. +| .|..+++|+.|+|++|+++ .+|..+..++ + |+.
T Consensus 555 Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~~-------lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l~~l~-~~L~~ 623 (876)
T 4ecn_A 555 MGYNNLE-EFPASASLQKMVKLGLLDCVHNKVRH-------LE-AFGTNVKLTDLKLDYNQIE-EIPEDFCAFT-DQVEG 623 (876)
T ss_dssp CCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCCB-------CC-CCCTTSEESEEECCSSCCS-CCCTTSCEEC-TTCCE
T ss_pred eeCCcCC-ccCChhhhhcCCCCCEEECCCCCccc-------ch-hhcCCCcceEEECcCCccc-cchHHHhhcc-ccCCE
Confidence 9999999 7777 89999999999999999974 44 6889999999999999998 8999999987 6 999
Q ss_pred EEcccCcccccCCccccCCCC--CCeeecccccceecCCcCC---C--CCCCCceeecccccccccccc---cccccChH
Q 041467 213 IAMGSNRISSTIPHGIRNLVN--LNWLTMESSQLIGTIPPLI---G--ETPNLQLLNIGGNHLQGSILS---SLGNLTLQ 282 (746)
Q Consensus 213 L~l~~N~i~~~~p~~~~~l~~--L~~L~L~~N~l~~~~p~~~---~--~l~~L~~L~Ls~N~l~~~~~~---~l~~l~~l 282 (746)
|++++|+++ .+|..+..+.. |+.|+|++|++.+.+|... . .+++|+.|+|++|+++..... .+.+|+.|
T Consensus 624 L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L 702 (876)
T 4ecn_A 624 LGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTI 702 (876)
T ss_dssp EECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEE
T ss_pred EECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEE
Confidence 999999999 78998888765 9999999999998776433 2 345899999999999944333 23567777
Q ss_pred HhhhccCCCCCCccccC--------CCCCCeeeecCCcCccccchhhh--hcccccceEEccCccccccCchhhhcccCC
Q 041467 283 TYLFNNLQGNIPSSLAN--------CKSLLGLSVSHNKLTSTLPQQIL--SVTTLSLYLELDNNLLNGSLPPEVGNLKNL 352 (746)
Q Consensus 283 ~~l~n~l~~~~p~~~~~--------l~~L~~L~Ls~N~l~~~~p~~~~--~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L 352 (746)
++.+|++. .+|..+.. |++|+.|+|++|+|+ .+|..++ .+++| +.|+|++|++++ +|..++++++|
T Consensus 703 ~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L-~~L~Ls~N~L~~-lp~~l~~L~~L 778 (876)
T 4ecn_A 703 ILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYL-SNMDVSYNCFSS-FPTQPLNSSQL 778 (876)
T ss_dssp ECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTC-CEEECCSSCCSS-CCCGGGGCTTC
T ss_pred ECCCCcCC-ccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCc-CEEEeCCCCCCc-cchhhhcCCCC
Confidence 77789998 56665443 338999999999999 7999987 89999 689999999997 89999999999
Q ss_pred ceeec---------------CCCCCCCCCCCEEEccCCcCcccCCCCCccCCCCeeeEecCCC
Q 041467 353 LRLHI---------------PEYPENLSFFELLNLSYNYFGSEVPTKGVFNNKTRFSIIGNGK 400 (746)
Q Consensus 353 ~~L~l---------------p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~ 400 (746)
+.|++ |..+..+++|+.|+|++|++ +.+|.. ...++..+++.+|+.
T Consensus 779 ~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~-l~~~L~~LdLs~N~l 839 (876)
T 4ecn_A 779 KAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEK-LTPQLYILDIADNPN 839 (876)
T ss_dssp CEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSC-CCSSSCEEECCSCTT
T ss_pred CEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCC-CccCHh-hcCCCCEEECCCCCC
Confidence 99966 44567789999999999999 778864 346777888887753
No 26
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=1.9e-39 Score=380.04 Aligned_cols=394 Identities=20% Similarity=0.193 Sum_probs=231.8
Q ss_pred CCcccccCccccccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccc
Q 041467 4 NNLLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDIL 83 (746)
Q Consensus 4 n~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~ 83 (746)
|.+...++..+..+++|++|+|++|.+++..+..|+++++|++|+|++|++++..|..|+++++|++|+|++|.+.+..|
T Consensus 59 n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~ 138 (680)
T 1ziw_A 59 NTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKL 138 (680)
T ss_dssp SCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCC
T ss_pred CccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCc
Confidence 44444444445556777777777777764444467777777777777777776556667777777777777777766666
Q ss_pred hhhcCCCCCCEEEccCCCCc----Ccc--cCCCCCCEEeccCCCcc----------------------------------
Q 041467 84 TEICSLFKLERLRIDCGGRI----DSL--GHLKSLLLLSLAFNQFL---------------------------------- 123 (746)
Q Consensus 84 ~~~~~l~~L~~L~l~~~~~~----~~~--~~l~~L~~L~Ls~N~l~---------------------------------- 123 (746)
..+.++++|++|+++.+... ..+ ..+++|+.|++++|++.
T Consensus 139 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~ 218 (680)
T 1ziw_A 139 GTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLE 218 (680)
T ss_dssp CSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHH
T ss_pred hhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHH
Confidence 66777777777777654321 111 12344444444444331
Q ss_pred -----------------c-----ccCC--CCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCc------
Q 041467 124 -----------------S-----LSNA--SSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANEL------ 173 (746)
Q Consensus 124 -----------------~-----l~~l--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~------ 173 (746)
. +.++ ++|+.|+|++|++++..|..|+.+++|++|+|++|.+++..+..+
T Consensus 219 l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 298 (680)
T 1ziw_A 219 LANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNV 298 (680)
T ss_dssp HTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTC
T ss_pred hhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCc
Confidence 1 1222 237777777777777666777777777777777776655332211
Q ss_pred -----------------cccc----cccCCCCCCEEEcccccccccCChhhhhcc-------------------------
Q 041467 174 -----------------DFIN----LLTNCSKLERLYFNRNGFEGVLPHSIANLS------------------------- 207 (746)
Q Consensus 174 -----------------~~~~----~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~------------------------- 207 (746)
.+|. .|..+++|++|++++|.+++..|..|..++
T Consensus 299 ~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~ 378 (680)
T 1ziw_A 299 RYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSL 378 (680)
T ss_dssp CEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGG
T ss_pred cEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhccc
Confidence 1111 455667777777777777766666555543
Q ss_pred --cccceEEcccCcccccCCccccCCCCCCeeecccccceecCC-cCCCCCCCCceeecccccccccccccccc---cCh
Q 041467 208 --STIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIP-PLIGETPNLQLLNIGGNHLQGSILSSLGN---LTL 281 (746)
Q Consensus 208 --~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~---l~~ 281 (746)
..|+.|++++|++++..|.+|..+++|++|+|++|.+.+.+| ..|.++++|++|++++|++.+..+..+.. |+.
T Consensus 379 ~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~ 458 (680)
T 1ziw_A 379 AHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQR 458 (680)
T ss_dssp TTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCE
T ss_pred ccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCccccc
Confidence 123444445555666666677777777777777777766555 46677777777777777766544443332 233
Q ss_pred HHhhhccCC--CCCCccccCCCCCCeeeecCCcCccccchhhhhcccccceEEccCccccccCc--------hhhhcccC
Q 041467 282 QTYLFNNLQ--GNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLP--------PEVGNLKN 351 (746)
Q Consensus 282 l~~l~n~l~--~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p--------~~~~~l~~ 351 (746)
+.+.+|.+. +.+|..|..+++|+.|+|++|++++..|..+..+..| ++|++++|++++..+ ..+.++++
T Consensus 459 L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L-~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~ 537 (680)
T 1ziw_A 459 LMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKL-EILDLQHNNLARLWKHANPGGPIYFLKGLSH 537 (680)
T ss_dssp EECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTC-CEEECCSSCCGGGGSTTSTTSCCCTTTTCTT
T ss_pred chhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhcccccc-CEEeCCCCCccccchhhccCCcchhhcCCCC
Confidence 333344443 4556666666667777777777665444556666666 456666666654211 12555666
Q ss_pred Cceeec--------CC-CCCCCCCCCEEEccCCcCcccCCCC-CccCCCCeeeEecC
Q 041467 352 LLRLHI--------PE-YPENLSFFELLNLSYNYFGSEVPTK-GVFNNKTRFSIIGN 398 (746)
Q Consensus 352 L~~L~l--------p~-~~~~l~~L~~L~ls~N~l~~~~p~~-~~~~~~~~~~~~~n 398 (746)
|+.|++ |. .+..++.|+.||+++|++++.++.. ..+..+..+++.+|
T Consensus 538 L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N 594 (680)
T 1ziw_A 538 LHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKN 594 (680)
T ss_dssp CCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTS
T ss_pred CCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCC
Confidence 666643 21 3455666666666666666533321 22344455555444
No 27
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=3.8e-40 Score=387.60 Aligned_cols=333 Identities=19% Similarity=0.235 Sum_probs=283.3
Q ss_pred CchhhhCCccCcEEecccCcCCc-----------------cCCcccc--CCCCCCeeeCcCCCCCCccchhhcCCCCCCE
Q 041467 34 IPHQIGRLISLERLILSNNSFSC-----------------AIPANLS--SGSNLIKLSTDSNNLVRDILTEICSLFKLER 94 (746)
Q Consensus 34 ~p~~~~~l~~L~~L~Ls~N~l~~-----------------~~p~~~~--~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 94 (746)
+|..|+++++|++|+|++|+|++ .+|..++ ++++|+.|+|++|++.+.+|..|+++++|+.
T Consensus 440 IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~ 519 (876)
T 4ecn_A 440 ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQS 519 (876)
T ss_dssp ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCE
T ss_pred hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCE
Confidence 88999999999999999999998 3899988 9999999999999999999999999999999
Q ss_pred EEccCCC-C-----cCccc-------CCCCCCEEeccCCCcc------cccCCCCCcEeeCccCcccccCCccccCCCCC
Q 041467 95 LRIDCGG-R-----IDSLG-------HLKSLLLLSLAFNQFL------SLSNASSLEMIEFSRNQFSGGVSVDFSRLKNL 155 (746)
Q Consensus 95 L~l~~~~-~-----~~~~~-------~l~~L~~L~Ls~N~l~------~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 155 (746)
|+++.|. . +..++ .+++|+.|+|++|++. .+.++++|+.|+|++|+++ .+| .|+.+++|
T Consensus 520 L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L 597 (876)
T 4ecn_A 520 LNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLEEFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKL 597 (876)
T ss_dssp EECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCCBCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEE
T ss_pred EECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCCccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcc
Confidence 9999886 2 22344 4559999999999994 4667899999999999999 677 89999999
Q ss_pred CEEEccCCCCCCCCCCCccccccccCCCC-CCEEEcccccccccCChhhhhcc-cccceEEcccCcccccCCccc---c-
Q 041467 156 SWLNLGVNNLGSGTANELDFINLLTNCSK-LERLYFNRNGFEGVLPHSIANLS-STIKQIAMGSNRISSTIPHGI---R- 229 (746)
Q Consensus 156 ~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~-L~~L~Ls~N~l~~~~p~~~~~l~-~~L~~L~l~~N~i~~~~p~~~---~- 229 (746)
+.|+|++|.++. +|..+..+++ |+.|+|++|.++ .+|..+..+. .+|+.|++++|++++.+|... .
T Consensus 598 ~~L~Ls~N~l~~-------lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~ 669 (876)
T 4ecn_A 598 TDLKLDYNQIEE-------IPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDD 669 (876)
T ss_dssp SEEECCSSCCSC-------CCTTSCEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTT
T ss_pred eEEECcCCcccc-------chHHHhhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhcc
Confidence 999999999974 5566888898 999999999998 7888777664 139999999999998776432 2
Q ss_pred -CCCCCCeeecccccceecCCcCC-CCCCCCceeeccccccccccccccc----------ccChHHhhhccCCCCCCccc
Q 041467 230 -NLVNLNWLTMESSQLIGTIPPLI-GETPNLQLLNIGGNHLQGSILSSLG----------NLTLQTYLFNNLQGNIPSSL 297 (746)
Q Consensus 230 -~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~~~~l~----------~l~~l~~l~n~l~~~~p~~~ 297 (746)
.+.+|+.|+|++|++. .+|..+ ..+++|+.|+|++|+++......+. +|+.|++.+|++. .+|..+
T Consensus 670 ~~~~~L~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l 747 (876)
T 4ecn_A 670 YKGINASTVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMTSIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDF 747 (876)
T ss_dssp CCCCCEEEEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCSCCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGG
T ss_pred ccCCCcCEEEccCCcCC-ccCHHHHccCCCCCEEECCCCcCCccChHHhccccccccccCCccEEECCCCCCc-cchHHh
Confidence 3458999999999998 566554 5899999999999999943333222 6777777789998 788888
Q ss_pred c--CCCCCCeeeecCCcCccccchhhhhcccccceEEccC------ccccccCchhhhcccCCceeec--------CCCC
Q 041467 298 A--NCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDN------NLLNGSLPPEVGNLKNLLRLHI--------PEYP 361 (746)
Q Consensus 298 ~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~------N~l~~~~p~~~~~l~~L~~L~l--------p~~~ 361 (746)
. .+++|+.|+|++|+|++ +|..++.+++| +.|+|++ |++.+.+|..++++++|+.|++ |..+
T Consensus 748 ~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L-~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L~~Ip~~l 825 (876)
T 4ecn_A 748 RATTLPYLSNMDVSYNCFSS-FPTQPLNSSQL-KAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQIGSNDIRKVDEKL 825 (876)
T ss_dssp STTTCTTCCEEECCSSCCSS-CCCGGGGCTTC-CEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCCCBCCSCC
T ss_pred hhccCCCcCEEEeCCCCCCc-cchhhhcCCCC-CEEECCCCCCcccccccccChHHHhcCCCCCEEECCCCCCCccCHhh
Confidence 7 99999999999999996 89999999999 6899976 8899999999999999999965 4443
Q ss_pred CCCCCCCEEEccCCcCcccCC
Q 041467 362 ENLSFFELLNLSYNYFGSEVP 382 (746)
Q Consensus 362 ~~l~~L~~L~ls~N~l~~~~p 382 (746)
. ++|+.|||++|++...-+
T Consensus 826 ~--~~L~~LdLs~N~l~~i~~ 844 (876)
T 4ecn_A 826 T--PQLYILDIADNPNISIDV 844 (876)
T ss_dssp C--SSSCEEECCSCTTCEEEC
T ss_pred c--CCCCEEECCCCCCCccCh
Confidence 3 689999999999976544
No 28
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=3.6e-39 Score=385.47 Aligned_cols=385 Identities=23% Similarity=0.186 Sum_probs=271.5
Q ss_pred CCCcccccCccccccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccC-CccccCCCCCCeeeCcCCCCCCc
Q 041467 3 SNNLLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAI-PANLSSGSNLIKLSTDSNNLVRD 81 (746)
Q Consensus 3 ~n~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~ 81 (746)
++++.++|. ..++|++|||++|.|++..|..|.++++|++|||++|.+.+.+ |..|.++++|++|+|++|.+.+.
T Consensus 13 ~~~L~~vP~----lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~ 88 (844)
T 3j0a_A 13 FCNLTQVPQ----VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFL 88 (844)
T ss_dssp CCCSSCCCS----SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEE
T ss_pred CCCCCCCCC----CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCccc
Confidence 456666665 3478999999999999889999999999999999999766566 88899999999999999999998
Q ss_pred cchhhcCCCCCCEEEccCCCCc----C--cccCCCCCCEEeccCCCcc------cccCCCCCcEeeCccCcccccCCccc
Q 041467 82 ILTEICSLFKLERLRIDCGGRI----D--SLGHLKSLLLLSLAFNQFL------SLSNASSLEMIEFSRNQFSGGVSVDF 149 (746)
Q Consensus 82 ~~~~~~~l~~L~~L~l~~~~~~----~--~~~~l~~L~~L~Ls~N~l~------~l~~l~~L~~L~Ls~N~l~~~~~~~~ 149 (746)
.|..|.++++|++|+|+.|... . .++++++|+.|+|++|.+. .|.++++|++|+|++|.+++..+..|
T Consensus 89 ~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l 168 (844)
T 3j0a_A 89 HPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHEL 168 (844)
T ss_dssp CTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGG
T ss_pred CHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHc
Confidence 8999999999999999986543 2 3889999999999999984 36789999999999999999999999
Q ss_pred cCC--CCCCEEEccCCCCCCCCCCCccccccccCCC------CCCEEEcccccccccCChhhhhc---------------
Q 041467 150 SRL--KNLSWLNLGVNNLGSGTANELDFINLLTNCS------KLERLYFNRNGFEGVLPHSIANL--------------- 206 (746)
Q Consensus 150 ~~l--~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~------~L~~L~Ls~N~l~~~~p~~~~~l--------------- 206 (746)
..+ ++|+.|+|+.|.+.+..+ ..+..++ +|+.|++++|.+++..|..+...
T Consensus 169 ~~l~~~~L~~L~L~~n~l~~~~~------~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~ 242 (844)
T 3j0a_A 169 EPLQGKTLSFFSLAANSLYSRVS------VDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHI 242 (844)
T ss_dssp HHHHHCSSCCCEECCSBSCCCCC------CCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSC
T ss_pred ccccCCccceEECCCCccccccc------cchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceeccccc
Confidence 888 899999999999987332 2233332 36777777776665555444321
Q ss_pred ----------------------ccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCCCceeecc
Q 041467 207 ----------------------SSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIG 264 (746)
Q Consensus 207 ----------------------~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 264 (746)
..+|+.|++++|.+.+..|..|..+++|+.|+|++|++.+..|..|..+++|++|+|+
T Consensus 243 ~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls 322 (844)
T 3j0a_A 243 MGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLS 322 (844)
T ss_dssp CBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEE
T ss_pred ccccccccccCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECC
Confidence 1246666666666666666666666666666666666666666666666666666666
Q ss_pred cccccccccccccccC---hHHhhhccCCCCCCccccCCCCCCeeeecCCcCccc------------------cc-----
Q 041467 265 GNHLQGSILSSLGNLT---LQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTST------------------LP----- 318 (746)
Q Consensus 265 ~N~l~~~~~~~l~~l~---~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~------------------~p----- 318 (746)
+|.+++..+..+..+. .+++.+|++.+..+..|..+++|++|+|++|.+++. +|
T Consensus 323 ~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~L~~L~l~~N~l~~l~~~~~~ 402 (844)
T 3j0a_A 323 YNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLT 402 (844)
T ss_dssp SCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCSSCCSCSEEEEESCCCCCCCCCCTT
T ss_pred CCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcccCCCCcchhccCCCCcccccccccc
Confidence 6666655555444333 333345666655555666666666666666665421 11
Q ss_pred -----------------hhhhhcccccceEEccCccccc------------------------------cCchhhhcccC
Q 041467 319 -----------------QQILSVTTLSLYLELDNNLLNG------------------------------SLPPEVGNLKN 351 (746)
Q Consensus 319 -----------------~~~~~l~~l~~~L~Ls~N~l~~------------------------------~~p~~~~~l~~ 351 (746)
..+..+++| +.|+|++|++++ ..|..|..+++
T Consensus 403 l~~L~ls~N~l~~l~~~~~~~~l~~L-~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~ 481 (844)
T 3j0a_A 403 ANLIHLSENRLENLDILYFLLRVPHL-QILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSH 481 (844)
T ss_dssp CCEEECCSCCCCSSTTHHHHTTCTTC-CEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCC
T ss_pred cceeecccCccccCchhhhhhcCCcc-ceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCccc
Confidence 012234444 345555555543 22334555666
Q ss_pred Cceeec---------CCCCCCCCCCCEEEccCCcCcccCCCCCccCCCCeeeEecCC
Q 041467 352 LLRLHI---------PEYPENLSFFELLNLSYNYFGSEVPTKGVFNNKTRFSIIGNG 399 (746)
Q Consensus 352 L~~L~l---------p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~n~ 399 (746)
|+.|++ |..+..++.|+.|+|++|++++.+|... ..++..+++.+|.
T Consensus 482 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~-~~~L~~L~Ls~N~ 537 (844)
T 3j0a_A 482 LQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDL-PANLEILDISRNQ 537 (844)
T ss_dssp EECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCC-CSCCCEEEEEEEC
T ss_pred ccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhh-hccccEEECCCCc
Confidence 666643 3445677777777777777777555332 2566677777663
No 29
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=9.2e-39 Score=369.06 Aligned_cols=376 Identities=14% Similarity=0.087 Sum_probs=297.8
Q ss_pred CCCcccccCccccccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCC-c
Q 041467 3 SNNLLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVR-D 81 (746)
Q Consensus 3 ~n~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~ 81 (746)
+|++...++..+..+++|++|+|++|.+++..|..|+++++|++|+|++|++++..|..|+++++|++|++++|.+.+ .
T Consensus 65 ~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~ 144 (606)
T 3vq2_A 65 RCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCK 144 (606)
T ss_dssp TCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCC
T ss_pred CCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCccccee
Confidence 455666666677789999999999999998889999999999999999999998777899999999999999999976 6
Q ss_pred cchhhcCCCCCCEEEccCCCCc----CcccCCCCCC----EEeccCCCcccc----------------------------
Q 041467 82 ILTEICSLFKLERLRIDCGGRI----DSLGHLKSLL----LLSLAFNQFLSL---------------------------- 125 (746)
Q Consensus 82 ~~~~~~~l~~L~~L~l~~~~~~----~~~~~l~~L~----~L~Ls~N~l~~l---------------------------- 125 (746)
+|..++++++|++|+++.+... ..++.+++|+ .|++++|.+..+
T Consensus 145 lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~n~~~~~~~~~~ 224 (606)
T 3vq2_A 145 LPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGIKLHELTLRGNFNSSNIMKTC 224 (606)
T ss_dssp CCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEESCCSCHHHHHHH
T ss_pred chHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCCCcceeCcccccCceeeeeeccCCccchhHHHHH
Confidence 7999999999999999886432 2233333222 444444444211
Q ss_pred ---------------------------------------------------------cCCCCCcEeeCccCcccccCCcc
Q 041467 126 ---------------------------------------------------------SNASSLEMIEFSRNQFSGGVSVD 148 (746)
Q Consensus 126 ---------------------------------------------------------~~l~~L~~L~Ls~N~l~~~~~~~ 148 (746)
..+++|+.|++++|.++. +| .
T Consensus 225 ~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~l~~L~~L~l~~~~~~~-l~-~ 302 (606)
T 3vq2_A 225 LQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLAGVSIKY-LE-D 302 (606)
T ss_dssp HHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGSCGGGTTCSEEEEESCCCCC-CC-C
T ss_pred hccccccccccccccccccCCcccccChHHhhhhhhccHhheeccccccccccccccccCCCCCEEEecCccchh-hh-h
Confidence 112344444444444432 22 4
Q ss_pred ccCCCCCCEEEccCCCCCCCCCCC-------------ccccccccCCCCCCEEEccccccccc--CChhhhhcccccceE
Q 041467 149 FSRLKNLSWLNLGVNNLGSGTANE-------------LDFINLLTNCSKLERLYFNRNGFEGV--LPHSIANLSSTIKQI 213 (746)
Q Consensus 149 ~~~l~~L~~L~Ls~N~l~~~~~~~-------------~~~~~~~~~l~~L~~L~Ls~N~l~~~--~p~~~~~l~~~L~~L 213 (746)
+..+++|+.|++++|.+...+.-. ...+..+..+++|++|++++|.+++. +|..+..++ +|++|
T Consensus 303 l~~~~~L~~L~l~~n~l~~lp~~~l~~L~~L~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~-~L~~L 381 (606)
T 3vq2_A 303 VPKHFKWQSLSIIRCQLKQFPTLDLPFLKSLTLTMNKGSISFKKVALPSLSYLDLSRNALSFSGCCSYSDLGTN-SLRHL 381 (606)
T ss_dssp CCTTCCCSEEEEESCCCSSCCCCCCSSCCEEEEESCSSCEECCCCCCTTCCEEECCSSCEEEEEECCHHHHCCS-CCCEE
T ss_pred ccccccCCEEEcccccCcccccCCCCccceeeccCCcCccchhhccCCCCCEEECcCCccCCCcchhhhhccCC-cccEe
Confidence 555666666666666664332100 00112466789999999999999866 488899987 79999
Q ss_pred EcccCcccccCCccccCCCCCCeeecccccceecCC-cCCCCCCCCceeecccccccccccccccc---cChHHhhhccC
Q 041467 214 AMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIP-PLIGETPNLQLLNIGGNHLQGSILSSLGN---LTLQTYLFNNL 289 (746)
Q Consensus 214 ~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~---l~~l~~l~n~l 289 (746)
++++|.+++ +|..|.++++|+.|++++|++.+..| ..+..+++|++|++++|.+++..|..+.. |+.+++.+|.+
T Consensus 382 ~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 460 (606)
T 3vq2_A 382 DLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSF 460 (606)
T ss_dssp ECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEE
T ss_pred ECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcC
Confidence 999999986 77899999999999999999998888 68999999999999999999988776655 45555668999
Q ss_pred CC-CCCccccCCCCCCeeeecCCcCccccchhhhhcccccceEEccCccccccCchhhhcccCCceeec--------CCC
Q 041467 290 QG-NIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNLKNLLRLHI--------PEY 360 (746)
Q Consensus 290 ~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l--------p~~ 360 (746)
.+ .+|..|+.+++|+.|+|++|++++..|..+..+++| +.|++++|++++..|..++++++|+.|++ |..
T Consensus 461 ~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L-~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~p~~ 539 (606)
T 3vq2_A 461 KDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRL-QLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIETSKGI 539 (606)
T ss_dssp GGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTC-CEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCCCEESC
T ss_pred CCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccC-CEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCcccCHh
Confidence 88 479999999999999999999998889999999999 68999999999988999999999999965 455
Q ss_pred CCCCC-CCCEEEccCCcCcccCCC
Q 041467 361 PENLS-FFELLNLSYNYFGSEVPT 383 (746)
Q Consensus 361 ~~~l~-~L~~L~ls~N~l~~~~p~ 383 (746)
+..++ +|+.|++++|.+....+.
T Consensus 540 ~~~l~~~L~~l~l~~N~~~c~c~~ 563 (606)
T 3vq2_A 540 LQHFPKSLAFFNLTNNSVACICEH 563 (606)
T ss_dssp GGGSCTTCCEEECCSCCCCCSSTT
T ss_pred HhhhcccCcEEEccCCCcccCCcc
Confidence 66776 599999999999987664
No 30
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=6.3e-39 Score=365.94 Aligned_cols=380 Identities=18% Similarity=0.196 Sum_probs=272.9
Q ss_pred CCCcccccCccccccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCcc
Q 041467 3 SNNLLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDI 82 (746)
Q Consensus 3 ~n~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 82 (746)
+|.+.++|...+ ++|++|+|++|++++..|..|.++++|++|+|++|++++..|..|+++++|++|+|++|.+.+..
T Consensus 14 ~~~l~~ip~~~~---~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 90 (549)
T 2z81_A 14 SRSFTSIPSGLT---AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLS 90 (549)
T ss_dssp TSCCSSCCSCCC---TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCC
T ss_pred CCccccccccCC---CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccC
Confidence 456666666443 68999999999999888899999999999999999999888889999999999999999998888
Q ss_pred chhhcCCCCCCEEEccCCCC-----cCcccCCCCCCEEeccCCCc------ccccCCCCCcEeeCccCcccccCCccccC
Q 041467 83 LTEICSLFKLERLRIDCGGR-----IDSLGHLKSLLLLSLAFNQF------LSLSNASSLEMIEFSRNQFSGGVSVDFSR 151 (746)
Q Consensus 83 ~~~~~~l~~L~~L~l~~~~~-----~~~~~~l~~L~~L~Ls~N~l------~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~ 151 (746)
|..|+++++|++|++++|.. +..++++++|+.|++++|++ ..+.++++|+.|++++|++++..|..++.
T Consensus 91 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~ 170 (549)
T 2z81_A 91 SSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKS 170 (549)
T ss_dssp HHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTT
T ss_pred HHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhc
Confidence 88899999999999988643 35688999999999999983 24678899999999999999888888776
Q ss_pred CCCCCEEEccCCCCCCCCCCCcccccc-ccCCCCCCEEEccccccccc---------------------------CChhh
Q 041467 152 LKNLSWLNLGVNNLGSGTANELDFINL-LTNCSKLERLYFNRNGFEGV---------------------------LPHSI 203 (746)
Q Consensus 152 l~~L~~L~Ls~N~l~~~~~~~~~~~~~-~~~l~~L~~L~Ls~N~l~~~---------------------------~p~~~ 203 (746)
+++|+.|+++.|.+.. ++.. +..+++|++|++++|++++. .+..+
T Consensus 171 l~~L~~L~l~~n~~~~-------~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l 243 (549)
T 2z81_A 171 IRDIHHLTLHLSESAF-------LLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNEL 243 (549)
T ss_dssp CSEEEEEEEECSBSTT-------HHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHH
T ss_pred cccCceEecccCcccc-------cchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHHH
Confidence 5555555444444321 1111 12233333333333333221 11100
Q ss_pred --------------------------------------------------------------hhcccccceEEcccCccc
Q 041467 204 --------------------------------------------------------------ANLSSTIKQIAMGSNRIS 221 (746)
Q Consensus 204 --------------------------------------------------------------~~l~~~L~~L~l~~N~i~ 221 (746)
.....+|+.|++++|+++
T Consensus 244 ~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~ 323 (549)
T 2z81_A 244 LKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVF 323 (549)
T ss_dssp HGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCC
T ss_pred HHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCccc
Confidence 011125777777777776
Q ss_pred ccCCccc-cCCCCCCeeecccccceecCC---cCCCCCCCCceeecccccccccc-----cccccccChHHhhhccCCCC
Q 041467 222 STIPHGI-RNLVNLNWLTMESSQLIGTIP---PLIGETPNLQLLNIGGNHLQGSI-----LSSLGNLTLQTYLFNNLQGN 292 (746)
Q Consensus 222 ~~~p~~~-~~l~~L~~L~L~~N~l~~~~p---~~~~~l~~L~~L~Ls~N~l~~~~-----~~~l~~l~~l~~l~n~l~~~ 292 (746)
.+|..+ .++++|++|++++|++.+.+| ..++.+++|++|+|++|++++.. ...+.+|+.+++.+|++. .
T Consensus 324 -~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ 401 (549)
T 2z81_A 324 -LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-P 401 (549)
T ss_dssp -CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-C
T ss_pred -cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-c
Confidence 466655 568888888888888887653 34677888888888888887532 345566667777778877 5
Q ss_pred CCccccCCCCCCeeeecCCcCccccchhhhhcccccceEEccCccccccCchhhhcccCCceeec--------CCCCCCC
Q 041467 293 IPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNLKNLLRLHI--------PEYPENL 364 (746)
Q Consensus 293 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l--------p~~~~~l 364 (746)
+|..+..+++|++|++++|+++ .+|..+. ..+ +.|++++|++++.+ +.+++|+.|++ |. ...+
T Consensus 402 lp~~~~~~~~L~~L~Ls~N~l~-~l~~~~~--~~L-~~L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~~ip~-~~~l 472 (549)
T 2z81_A 402 MPDSCQWPEKMRFLNLSSTGIR-VVKTCIP--QTL-EVLDVSNNNLDSFS----LFLPRLQELYISRNKLKTLPD-ASLF 472 (549)
T ss_dssp CCSCCCCCTTCCEEECTTSCCS-CCCTTSC--TTC-SEEECCSSCCSCCC----CCCTTCCEEECCSSCCSSCCC-GGGC
T ss_pred CChhhcccccccEEECCCCCcc-cccchhc--CCc-eEEECCCCChhhhc----ccCChhcEEECCCCccCcCCC-cccC
Confidence 7778888888888888888887 4565442 355 57888888887642 46777777754 33 2457
Q ss_pred CCCCEEEccCCcCcccCCC-CCccCCCCeeeEecCCCcCC
Q 041467 365 SFFELLNLSYNYFGSEVPT-KGVFNNKTRFSIIGNGKLCG 403 (746)
Q Consensus 365 ~~L~~L~ls~N~l~~~~p~-~~~~~~~~~~~~~~n~~l~~ 403 (746)
+.|+.||+++|++++.+|. ...+..+..+++.+|+..|.
T Consensus 473 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 512 (549)
T 2z81_A 473 PVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 512 (549)
T ss_dssp TTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCC
T ss_pred ccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCC
Confidence 7888888888888887664 34566777788888876553
No 31
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=1e-40 Score=360.21 Aligned_cols=180 Identities=21% Similarity=0.289 Sum_probs=149.9
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecC------C
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSI------D 541 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~------~ 541 (746)
.++|+..+.||+|+||+||+ ||||++.... ....+.+.+|+++|++++|||||++++++... +
T Consensus 53 ~~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~ 132 (398)
T 4b99_A 53 GDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFK 132 (398)
T ss_dssp CSSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCC
T ss_pred CCCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCC
Confidence 35799999999999999997 9999986542 33456788999999999999999999997653 4
Q ss_pred cccchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccc
Q 041467 542 FEGFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFL 616 (746)
Q Consensus 542 ~~~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~ 616 (746)
..|+|||||. |+|. ...+++.++..+++||+.||+|||++ +||||||||+|||++.+|.+||+|||+|+.+
T Consensus 133 ~~~ivmE~~~-g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~ 208 (398)
T 4b99_A 133 SVYVVLDLME-SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGL 208 (398)
T ss_dssp CEEEEEECCS-EEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBCC
T ss_pred EEEEEEeCCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeecceeeec
Confidence 6799999996 5554 56799999999999999999999999 9999999999999999999999999999876
Q ss_pred cCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 617 YGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
..... .......+.+||++|||||++.+..+ ++.++||||+||++|
T Consensus 209 ~~~~~----~~~~~~~~~~GT~~Y~APEv~~~~~~--~~~~~DiWSlG~il~ 254 (398)
T 4b99_A 209 CTSPA----EHQYFMTEYVATRWYRAPELMLSLHE--YTQAIDLWSVGCIFG 254 (398)
T ss_dssp -----------CCCCCSSCCCCTTCCHHHHTTCSC--CCTHHHHHHHHHHHH
T ss_pred ccCcc----ccccccccceeChHhcCHHHhcCCCC--CCChhheehhHHHHH
Confidence 43221 11223456899999999999988654 244699999999999
No 32
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.9e-38 Score=363.71 Aligned_cols=379 Identities=20% Similarity=0.187 Sum_probs=239.3
Q ss_pred ccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEc
Q 041467 18 TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRI 97 (746)
Q Consensus 18 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 97 (746)
+++++|+|++|.+++..+.+|.++++|++|+|++|++++..|..|+++++|++|+|++|.+.+..|..|.++++|++|++
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccc
Confidence 46778888888887766777888888888888888887766677778888888888888777666677788888888888
Q ss_pred cCCCCc----CcccCCCCCCEEeccCCCccc------ccCCCCCcEeeCccCcccccCCccccCCCCC----CEEEccCC
Q 041467 98 DCGGRI----DSLGHLKSLLLLSLAFNQFLS------LSNASSLEMIEFSRNQFSGGVSVDFSRLKNL----SWLNLGVN 163 (746)
Q Consensus 98 ~~~~~~----~~~~~l~~L~~L~Ls~N~l~~------l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L----~~L~Ls~N 163 (746)
+.+... ..++++++|++|+|++|.+.. +.++++|+.|++++|++++..+..|+.+++| +.|++++|
T Consensus 108 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n 187 (570)
T 2z63_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 187 (570)
T ss_dssp TTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTC
T ss_pred cccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCC
Confidence 765432 247777888888888887642 4567778888888888777777777777766 67777777
Q ss_pred CCCCCCCCCc----------------------------------------------------------------------
Q 041467 164 NLGSGTANEL---------------------------------------------------------------------- 173 (746)
Q Consensus 164 ~l~~~~~~~~---------------------------------------------------------------------- 173 (746)
.+++..+..+
T Consensus 188 ~l~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~ 267 (570)
T 2z63_A 188 PMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYL 267 (570)
T ss_dssp CCCEECTTTTTTCEEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEET
T ss_pred CceecCHHHhccCcceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhcc
Confidence 6655433211
Q ss_pred -----cccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCcc-c-------------------
Q 041467 174 -----DFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHG-I------------------- 228 (746)
Q Consensus 174 -----~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~-~------------------- 228 (746)
..+..+..+++|+.|++++|.++ .+|..+..+ .|+.|++++|.+. .+|.. +
T Consensus 268 ~~~~~~~~~~~~~l~~L~~L~l~~~~l~-~l~~~~~~~--~L~~L~l~~n~~~-~l~~~~l~~L~~L~l~~n~~~~~~~~ 343 (570)
T 2z63_A 268 DYYLDDIIDLFNCLTNVSSFSLVSVTIE-RVKDFSYNF--GWQHLELVNCKFG-QFPTLKLKSLKRLTFTSNKGGNAFSE 343 (570)
T ss_dssp TEEESCSTTTTGGGTTCSEEEEESCEEC-SCCBCCSCC--CCSEEEEESCBCS-SCCBCBCSSCCEEEEESCBSCCBCCC
T ss_pred hhhhhhchhhhcCcCcccEEEecCccch-hhhhhhccC--CccEEeeccCccc-ccCcccccccCEEeCcCCcccccccc
Confidence 01234556788888888888887 577777665 5777777777776 44442 0
Q ss_pred cCCCCCCeeecccccceecC--CcCCCCCCCCceeecccccccccccc--cccccChHHhhhccCCCCCC-ccccCCCCC
Q 041467 229 RNLVNLNWLTMESSQLIGTI--PPLIGETPNLQLLNIGGNHLQGSILS--SLGNLTLQTYLFNNLQGNIP-SSLANCKSL 303 (746)
Q Consensus 229 ~~l~~L~~L~L~~N~l~~~~--p~~~~~l~~L~~L~Ls~N~l~~~~~~--~l~~l~~l~~l~n~l~~~~p-~~~~~l~~L 303 (746)
..+++|++|++++|++.+.. |..+..+++|++|++++|.+++..+. .+.+|+.+++.+|.+.+..| ..+..+++|
T Consensus 344 ~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L 423 (570)
T 2z63_A 344 VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNL 423 (570)
T ss_dssp CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEEEETCTTCCEEECTTSEEESCTTSCTTTTCTTC
T ss_pred ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCccccccccccccCCCCEEEccCCccccccchhhhhcCCCC
Confidence 34445555555555554332 34445555555555555555543322 22233344444555555444 345666666
Q ss_pred CeeeecCCcCccccchhhhhcccccceEEccCcccc-ccCchhhhcccCCceeec---------CCCCCCCCCCCEEEcc
Q 041467 304 LGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLN-GSLPPEVGNLKNLLRLHI---------PEYPENLSFFELLNLS 373 (746)
Q Consensus 304 ~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~l---------p~~~~~l~~L~~L~ls 373 (746)
++|++++|++++..|..+..+++| +.|++++|.++ +.+|..+..+++|+.|++ |..+..+++|+.|+++
T Consensus 424 ~~L~l~~n~l~~~~~~~~~~l~~L-~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 502 (570)
T 2z63_A 424 IYLDISHTHTRVAFNGIFNGLSSL-EVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMA 502 (570)
T ss_dssp CEEECTTSCCEECCTTTTTTCTTC-CEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECC
T ss_pred CEEeCcCCcccccchhhhhcCCcC-cEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCC
Confidence 666666666665556556666666 45666666665 456666666666666643 3345555666666666
Q ss_pred CCcCcccCCCC-CccCCCCeeeEecCCCc
Q 041467 374 YNYFGSEVPTK-GVFNNKTRFSIIGNGKL 401 (746)
Q Consensus 374 ~N~l~~~~p~~-~~~~~~~~~~~~~n~~l 401 (746)
+|++++.+|.. ..+..+..+++.+|+..
T Consensus 503 ~n~l~~~~~~~~~~l~~L~~L~l~~N~~~ 531 (570)
T 2z63_A 503 SNQLKSVPDGIFDRLTSLQKIWLHTNPWD 531 (570)
T ss_dssp SSCCSCCCTTTTTTCTTCCEEECCSSCBC
T ss_pred CCcCCCCCHHHhhcccCCcEEEecCCccc
Confidence 66666654432 23445555555555543
No 33
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=4.7e-38 Score=350.01 Aligned_cols=350 Identities=17% Similarity=0.169 Sum_probs=284.1
Q ss_pred ccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccC-CccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEE
Q 041467 18 TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAI-PANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLR 96 (746)
Q Consensus 18 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 96 (746)
++|++|+|++|.+++..|..|+++++|++|+|++|.+.+.+ |..|.++++|++|+|++|.+.+..|..|.++++|++|+
T Consensus 30 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 109 (455)
T 3v47_A 30 AHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLT 109 (455)
T ss_dssp TTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEE
T ss_pred CccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEe
Confidence 78999999999999888999999999999999999997555 56799999999999999999888899999999999999
Q ss_pred ccCCCCc------CcccCCCCCCEEeccCCCccc------ccCCCCCcEeeCccCcccccCCccccCC--CCCCEEEccC
Q 041467 97 IDCGGRI------DSLGHLKSLLLLSLAFNQFLS------LSNASSLEMIEFSRNQFSGGVSVDFSRL--KNLSWLNLGV 162 (746)
Q Consensus 97 l~~~~~~------~~~~~l~~L~~L~Ls~N~l~~------l~~l~~L~~L~Ls~N~l~~~~~~~~~~l--~~L~~L~Ls~ 162 (746)
++++... ..++++++|++|+|++|++.. +.++++|++|++++|++++..+..+..+ .+|+.|++++
T Consensus 110 L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~ 189 (455)
T 3v47_A 110 LTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSS 189 (455)
T ss_dssp CTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTT
T ss_pred CCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhcccccccccccccc
Confidence 9987653 238899999999999999943 5678999999999999999999888876 7899999999
Q ss_pred CCCCCCCCCCcc--ccccccCCCCCCEEEcccccccccCChhhhhcc--cccceEEcccCccccc----------CCccc
Q 041467 163 NNLGSGTANELD--FINLLTNCSKLERLYFNRNGFEGVLPHSIANLS--STIKQIAMGSNRISST----------IPHGI 228 (746)
Q Consensus 163 N~l~~~~~~~~~--~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~--~~L~~L~l~~N~i~~~----------~p~~~ 228 (746)
|.+.......+. ....+..+++|+.|++++|++++..|..+.... .+|+.|++++|.+.+. .+..+
T Consensus 190 n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~ 269 (455)
T 3v47_A 190 ITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTF 269 (455)
T ss_dssp CBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTT
T ss_pred CcccccchhhccccccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCccccc
Confidence 999875443211 112244678999999999999998888887651 2799999998866542 12222
Q ss_pred cC--CCCCCeeecccccceecCCcCCCCCCCCceeecccccccccccccccc---cChHHhhhccCCCCCCccccCCCCC
Q 041467 229 RN--LVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGN---LTLQTYLFNNLQGNIPSSLANCKSL 303 (746)
Q Consensus 229 ~~--l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~---l~~l~~l~n~l~~~~p~~~~~l~~L 303 (746)
.. .++|++|++++|++.+..|..|+.+++|++|+|++|++++..+..+.. |+.|++.+|.+.+..|..|+++++|
T Consensus 270 ~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 349 (455)
T 3v47_A 270 KGLEASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKL 349 (455)
T ss_dssp GGGTTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTC
T ss_pred ccccccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccC
Confidence 22 368999999999999999999999999999999999999776665544 4444555777777777778888888
Q ss_pred CeeeecCCcCccccchhhhhcccccceEEccCccccccCchhhhcccCCceeecCCCCCCCCCCCEEEccCCcCcccCCC
Q 041467 304 LGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNLKNLLRLHIPEYPENLSFFELLNLSYNYFGSEVPT 383 (746)
Q Consensus 304 ~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~lp~~~~~l~~L~~L~ls~N~l~~~~p~ 383 (746)
++|+|++|++++..|..+..+++| ++|+|++|++++..+.. +..+++|+.|++++|++++.+|.
T Consensus 350 ~~L~Ls~N~l~~~~~~~~~~l~~L-~~L~L~~N~l~~~~~~~---------------~~~l~~L~~L~l~~N~l~~~~~~ 413 (455)
T 3v47_A 350 EVLDLSYNHIRALGDQSFLGLPNL-KELALDTNQLKSVPDGI---------------FDRLTSLQKIWLHTNPWDCSCPR 413 (455)
T ss_dssp CEEECCSSCCCEECTTTTTTCTTC-CEEECCSSCCSCCCTTT---------------TTTCTTCCEEECCSSCBCCCTTT
T ss_pred CEEECCCCcccccChhhccccccc-cEEECCCCccccCCHhH---------------hccCCcccEEEccCCCcccCCCc
Confidence 888888888887667777788887 57888888887433333 34567778999999999998884
No 34
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=8.9e-38 Score=353.93 Aligned_cols=369 Identities=20% Similarity=0.204 Sum_probs=242.3
Q ss_pred CCCCcccccCccccccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCc
Q 041467 2 SSNNLLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRD 81 (746)
Q Consensus 2 ~~n~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 81 (746)
++|++..+|.... ++|++|+|++|.+++..|..|.++++|++|+|++|+|++..|..|+++++|++|+|++|++. .
T Consensus 8 s~n~l~~ip~~~~---~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~ 83 (520)
T 2z7x_B 8 SKNGLIHVPKDLS---QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-K 83 (520)
T ss_dssp TTSCCSSCCCSCC---TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-E
T ss_pred CCCCccccccccc---ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-e
Confidence 3456666554333 78999999999999888899999999999999999999888999999999999999999996 5
Q ss_pred cchhhcCCCCCCEEEccCCCC-----cCcccCCCCCCEEeccCCCcc--cccCCCCC--cEeeCccCcc--cccCCcccc
Q 041467 82 ILTEICSLFKLERLRIDCGGR-----IDSLGHLKSLLLLSLAFNQFL--SLSNASSL--EMIEFSRNQF--SGGVSVDFS 150 (746)
Q Consensus 82 ~~~~~~~l~~L~~L~l~~~~~-----~~~~~~l~~L~~L~Ls~N~l~--~l~~l~~L--~~L~Ls~N~l--~~~~~~~~~ 150 (746)
+|.. .+++|++|++++|.. +..|+++++|++|+|++|++. .+..+++| +.|++++|++ .+..|..|.
T Consensus 84 lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~ 161 (520)
T 2z7x_B 84 ISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEKSSVLPIAHLNISKVLLVLGETYGEKEDPEGLQ 161 (520)
T ss_dssp EECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCGGGGGGGTTSCEEEEEEEECTTTTSSCCTTTTT
T ss_pred cCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccchhhccccccceeeEEEeeccccccccccccccc
Confidence 7766 899999999998653 357899999999999999994 46677788 9999999999 666666665
Q ss_pred C--------------------------CCCCCEEEccCCC------------------------------CCCCCCCCcc
Q 041467 151 R--------------------------LKNLSWLNLGVNN------------------------------LGSGTANELD 174 (746)
Q Consensus 151 ~--------------------------l~~L~~L~Ls~N~------------------------------l~~~~~~~~~ 174 (746)
. +++|+.|++++|. +++.... .
T Consensus 162 ~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~--~ 239 (520)
T 2z7x_B 162 DFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFI--R 239 (520)
T ss_dssp TCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHH--H
T ss_pred ccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchhhhccccchhhccccccccCHHHHH--H
Confidence 5 3334444444432 1100000 0
Q ss_pred ccccccCCCCCCEEEcccccccccCChhh-----hhcccccceEEcccCcccccCC-ccc--------------------
Q 041467 175 FINLLTNCSKLERLYFNRNGFEGVLPHSI-----ANLSSTIKQIAMGSNRISSTIP-HGI-------------------- 228 (746)
Q Consensus 175 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~-----~~l~~~L~~L~l~~N~i~~~~p-~~~-------------------- 228 (746)
++..+ .+++|++|++++|+++|.+|..+ ..+. .|+.+++++|.+ .+| ..+
T Consensus 240 ~~~~~-~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~-~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~ 315 (520)
T 2z7x_B 240 ILQLV-WHTTVWYFSISNVKLQGQLDFRDFDYSGTSLK-ALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMV 315 (520)
T ss_dssp HHHHH-HTSSCSEEEEEEEEEESCCCCCCCCCCSCCCC-EEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCC
T ss_pred HHHHh-hhCcccEEEeecccccCccccchhhcccccCc-eeEeccccccce--ecchhhhhcccccCceeEEEcCCCccc
Confidence 00000 12356666667777666666655 4444 455555555555 233 222
Q ss_pred -----cCCCCCCeeecccccceecCCcCCCCCCCCceeecccccccc--ccccc---ccccChHHhhhccCCCCCCc-cc
Q 041467 229 -----RNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQG--SILSS---LGNLTLQTYLFNNLQGNIPS-SL 297 (746)
Q Consensus 229 -----~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~~~~---l~~l~~l~~l~n~l~~~~p~-~~ 297 (746)
..+++|++|++++|++.+.+|..++.+++|++|+|++|++++ .+|.. +.+|+.|++.+|.+.+.+|. .+
T Consensus 316 ~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~ 395 (520)
T 2z7x_B 316 HMLCPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDC 395 (520)
T ss_dssp CCCCCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSC
T ss_pred cccchhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchh
Confidence 456666666666666666666666666666666666666664 22322 33344444445666654443 35
Q ss_pred cCCCCCCeeeecCCcCccccchhhhhcccccceEEccCccccccCchhhhcccCCceeecCCCCCCCCCCCEEEccCCcC
Q 041467 298 ANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNLKNLLRLHIPEYPENLSFFELLNLSYNYF 377 (746)
Q Consensus 298 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~lp~~~~~l~~L~~L~ls~N~l 377 (746)
..+++|++|++++|++++.+|..+. ..+ +.|++++|+++ .+|.++. .++.|+.|++++|++
T Consensus 396 ~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L-~~L~Ls~N~l~-~ip~~~~---------------~l~~L~~L~L~~N~l 456 (520)
T 2z7x_B 396 SWTKSLLSLNMSSNILTDTIFRCLP--PRI-KVLDLHSNKIK-SIPKQVV---------------KLEALQELNVASNQL 456 (520)
T ss_dssp CCCTTCCEEECCSSCCCGGGGGSCC--TTC-CEEECCSSCCC-CCCGGGG---------------GCTTCCEEECCSSCC
T ss_pred ccCccCCEEECcCCCCCcchhhhhc--ccC-CEEECCCCccc-ccchhhh---------------cCCCCCEEECCCCcC
Confidence 5666666666666666655555443 344 45666666665 5555444 456667778888888
Q ss_pred cccCCC--CCccCCCCeeeEecCCCcC
Q 041467 378 GSEVPT--KGVFNNKTRFSIIGNGKLC 402 (746)
Q Consensus 378 ~~~~p~--~~~~~~~~~~~~~~n~~l~ 402 (746)
++ +|. ...+..+..+++.+|+..|
T Consensus 457 ~~-l~~~~~~~l~~L~~L~l~~N~~~c 482 (520)
T 2z7x_B 457 KS-VPDGIFDRLTSLQKIWLHTNPWDC 482 (520)
T ss_dssp CC-CCTTTTTTCTTCCEEECCSSCBCC
T ss_pred Cc-cCHHHhccCCcccEEECcCCCCcc
Confidence 74 443 2345566677777776554
No 35
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=1.3e-39 Score=347.88 Aligned_cols=186 Identities=22% Similarity=0.246 Sum_probs=151.9
Q ss_pred hhhhcCCCCCCeEeecCCeeEEE------------EEeehhhhhhhhhhHHHHHHHHHhhcC-CCCceeeEEEEEecCCc
Q 041467 476 SKATNNFSPANKIREGGFNIVYN------------VAMKVANLKQKEASRSFAAEFNALRNI-RHRNLIKIITICSSIDF 542 (746)
Q Consensus 476 ~~~~~~~~~~~~ig~g~~g~v~~------------vavK~~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~~~~ 542 (746)
....++|++.+.||+|+||+||+ ||||++... ....++.+|+++++.+ +|||||+++++|.+.+.
T Consensus 17 p~l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~--~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~ 94 (361)
T 4f9c_A 17 PQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT--SHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDH 94 (361)
T ss_dssp GGGGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT--SCHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTE
T ss_pred CCccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc--cCHHHHHHHHHHHHHhcCCCCCceEEEEEEECCE
Confidence 34567899999999999999995 899987543 2345688999999998 69999999999999999
Q ss_pred ccchhhhccCCccc--ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCC-CcEEEccccccccccCC
Q 041467 543 EGFDFKAISNGQLR--LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQD-VVTHVGDLGLAKFLYGY 619 (746)
Q Consensus 543 ~~lv~e~~~~g~l~--~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~-~~~ki~DfGla~~~~~~ 619 (746)
.|+|||||++|+|. ...+++.+++.++.|++.||+|||++ +||||||||+|||++.+ +.+||+|||+|+.....
T Consensus 95 ~~lvmE~~~g~~L~~~~~~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~ 171 (361)
T 4f9c_A 95 VVIAMPYLEHESFLDILNSLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDT 171 (361)
T ss_dssp EEEEEECCCCCCHHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEECTTC
T ss_pred EEEEEeCCCcccHHHHHcCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCc
Confidence 99999999999986 45799999999999999999999999 99999999999999876 89999999999865432
Q ss_pred CCCCC--------------------cccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 620 EPGTT--------------------AETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 620 ~~~~~--------------------~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
..... ........+.+||++|||||++.+... ++.++||||+||++|
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~--y~~~~DiWSlG~il~ 238 (361)
T 4f9c_A 172 KIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPN--QTTAIDMWSAGVIFL 238 (361)
T ss_dssp SCGGGGGC--------------------------CCCCGGGCCHHHHTTCSC--CCTHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCC--CCCccchhhhHHHHH
Confidence 21100 001122345789999999999987643 244699999999999
No 36
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=5.3e-39 Score=360.82 Aligned_cols=213 Identities=23% Similarity=0.241 Sum_probs=167.2
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhH---HHHHHHHHhhcCCCCceeeEEEEEecCCc
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASR---SFAAEFNALRNIRHRNLIKIITICSSIDF 542 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~---~~~~E~~~l~~l~HpnIv~l~~~~~~~~~ 542 (746)
..++|+..+.||+|+||+||+ ||||++.+.. ..... ..++|+.+++.++|||||+++++|.+.+.
T Consensus 187 slddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ 266 (689)
T 3v5w_A 187 TMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDK 266 (689)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSE
T ss_pred chHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCE
Confidence 357899999999999999996 9999986542 12222 23445677888999999999999999999
Q ss_pred ccchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccccccccc
Q 041467 543 EGFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617 (746)
Q Consensus 543 ~~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~ 617 (746)
.|+|||||++|+|. ...+++.+++.|+.||+.||+|||++ +||||||||+||||+.+|++||+|||+|+.+.
T Consensus 267 lylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~ 343 (689)
T 3v5w_A 267 LSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFS 343 (689)
T ss_dssp EEEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTTCEECS
T ss_pred EEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccceeeecC
Confidence 99999999999996 46799999999999999999999999 99999999999999999999999999998763
Q ss_pred CCCCCCCcccccccccccccccccccccccc-cccccCCCccceeeccceeec-----cccc-----cc----cchhhcc
Q 041467 618 GYEPGTTAETASSSIGINGTVGYVAPVIIAA-RNLENREKRHTVMSFPQRFAL-----NEKK-----QN----KSILKSA 682 (746)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~~~~~DiwSlG~i~~~-----~~~~-----~~----~~i~~~~ 682 (746)
.. ...+.+||+.|||||++.. ..|+. ++||||+||++|. ..+. .. ..+....
T Consensus 344 ~~----------~~~t~~GTp~YmAPEvl~~~~~y~~---~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~~ 410 (689)
T 3v5w_A 344 KK----------KPHASVGTHGYMAPEVLQKGVAYDS---SADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMA 410 (689)
T ss_dssp SC----------CCCSCCSCGGGCCHHHHSTTCCCCT---HHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHCC
T ss_pred CC----------CCCCccCCcCccCHHHHhCCCCCCc---HHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCC
Confidence 32 1234789999999999975 44544 5999999999991 1111 00 1111111
Q ss_pred c----cCCCccHHHHHHhhCCCCCCCCC
Q 041467 683 G----IKGKKTVSFFLSLLSPSCSVFPL 706 (746)
Q Consensus 683 ~----~~~~~~~~~~~~~~~~~~~~~p~ 706 (746)
. ..+.+..+.+..|+.+++..|+.
T Consensus 411 ~~~p~~~S~~a~dLI~~lL~~dP~~Rl~ 438 (689)
T 3v5w_A 411 VELPDSFSPELRSLLEGLLQRDVNRRLG 438 (689)
T ss_dssp CCCCTTSCHHHHHHHHHHTCSCGGGCTT
T ss_pred CCCCccCCHHHHHHHHHHccCCHhHCCC
Confidence 1 12345567778888887776665
No 37
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=7.6e-38 Score=356.98 Aligned_cols=367 Identities=19% Similarity=0.176 Sum_probs=261.8
Q ss_pred CCCcccccCccccccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCC-c
Q 041467 3 SNNLLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVR-D 81 (746)
Q Consensus 3 ~n~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~ 81 (746)
+|++...++..+..+++|++|+|++|++++..|.+|+++++|++|+|++|++++..|..|+++++|++|+|++|.+.+ .
T Consensus 35 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 114 (549)
T 2z81_A 35 FNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLG 114 (549)
T ss_dssp SSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSC
T ss_pred CCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccc
Confidence 455666666677789999999999999998888999999999999999999998777779999999999999999976 4
Q ss_pred cchhhcCCCCCCEEEccCCCCc-----CcccCCCCCCEEeccCCCccc-----ccCCCCCcEeeCccCcccccCCccccC
Q 041467 82 ILTEICSLFKLERLRIDCGGRI-----DSLGHLKSLLLLSLAFNQFLS-----LSNASSLEMIEFSRNQFSGGVSVDFSR 151 (746)
Q Consensus 82 ~~~~~~~l~~L~~L~l~~~~~~-----~~~~~l~~L~~L~Ls~N~l~~-----l~~l~~L~~L~Ls~N~l~~~~~~~~~~ 151 (746)
.|..+.++++|++|+++.+... ..+.++++|+.|++++|++.. +.++++|+.|++++|.+....+..+..
T Consensus 115 ~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~ 194 (549)
T 2z81_A 115 VTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADI 194 (549)
T ss_dssp SSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBSTTHHHHHHHS
T ss_pred hhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCcccccchhhHhh
Confidence 6778999999999999886532 468899999999999999843 455666666666666655333333345
Q ss_pred CCCCCEEEccCCCCCCCCCCCcc---------------------------------------------------------
Q 041467 152 LKNLSWLNLGVNNLGSGTANELD--------------------------------------------------------- 174 (746)
Q Consensus 152 l~~L~~L~Ls~N~l~~~~~~~~~--------------------------------------------------------- 174 (746)
+++|++|++++|.+++.......
T Consensus 195 l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~ 274 (549)
T 2z81_A 195 LSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSES 274 (549)
T ss_dssp TTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTT
T ss_pred cccccEEEccCCccccccccccchhhhhhcccceeccccccchhHHHHHHHHhhhhccccccccccccccccccccccch
Confidence 56666666666665542100000
Q ss_pred ---------------------------ccccccCCCCCCEEEcccccccccCChhhh-hcccccceEEcccCcccccCCc
Q 041467 175 ---------------------------FINLLTNCSKLERLYFNRNGFEGVLPHSIA-NLSSTIKQIAMGSNRISSTIPH 226 (746)
Q Consensus 175 ---------------------------~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~~L~~L~l~~N~i~~~~p~ 226 (746)
++..+..+++|+.|++++|.++ .+|..+. .++ +|+.|++++|++++.+|.
T Consensus 275 ~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~-~L~~L~Ls~N~l~~~~~~ 352 (549)
T 2z81_A 275 DVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVF-LVPCSFSQHLK-SLEFLDLSENLMVEEYLK 352 (549)
T ss_dssp TCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCC-CCCHHHHHHCT-TCCEEECCSSCCCHHHHH
T ss_pred hhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccCccc-cCCHHHHhcCc-cccEEEccCCcccccccc
Confidence 0000111245777777777775 5676664 565 688888888888876543
Q ss_pred ---cccCCCCCCeeecccccceecCC--cCCCCCCCCceeeccccccccccccccc---ccChHHhhhccCCCCCCcccc
Q 041467 227 ---GIRNLVNLNWLTMESSQLIGTIP--PLIGETPNLQLLNIGGNHLQGSILSSLG---NLTLQTYLFNNLQGNIPSSLA 298 (746)
Q Consensus 227 ---~~~~l~~L~~L~L~~N~l~~~~p--~~~~~l~~L~~L~Ls~N~l~~~~~~~l~---~l~~l~~l~n~l~~~~p~~~~ 298 (746)
.++.+++|++|+|++|++++..+ ..+..+++|++|+|++|+++ .+|..+. +|+.+++.+|.+.+ +|..+.
T Consensus 353 ~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~-l~~~~~ 430 (549)
T 2z81_A 353 NSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRV-VKTCIP 430 (549)
T ss_dssp HHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSC-CCTTSC
T ss_pred chhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCccc-ccchhc
Confidence 36777888888888888865432 45777888888888888887 4454443 44555555677663 343332
Q ss_pred CCCCCCeeeecCCcCccccchhhhhcccccceEEccCccccccCchhhhcccCCceeec---------CCCCCCCCCCCE
Q 041467 299 NCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNLKNLLRLHI---------PEYPENLSFFEL 369 (746)
Q Consensus 299 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l---------p~~~~~l~~L~~ 369 (746)
++|++|+|++|+|++. + ..++.| +.|+|++|+++ .+|. ...+++|+.|++ |..+..+++|+.
T Consensus 431 --~~L~~L~Ls~N~l~~~-~---~~l~~L-~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 501 (549)
T 2z81_A 431 --QTLEVLDVSNNNLDSF-S---LFLPRL-QELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQK 501 (549)
T ss_dssp --TTCSEEECCSSCCSCC-C---CCCTTC-CEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCE
T ss_pred --CCceEEECCCCChhhh-c---ccCChh-cEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCE
Confidence 5778888888887753 2 356666 56888888887 6665 456777777754 234567888999
Q ss_pred EEccCCcCcccCC
Q 041467 370 LNLSYNYFGSEVP 382 (746)
Q Consensus 370 L~ls~N~l~~~~p 382 (746)
|++++|++++..|
T Consensus 502 L~l~~N~~~~~~~ 514 (549)
T 2z81_A 502 IWLHTNPWDCSCP 514 (549)
T ss_dssp EECCSSCBCCCHH
T ss_pred EEecCCCccCCCc
Confidence 9999999998877
No 38
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.8e-37 Score=352.88 Aligned_cols=370 Identities=19% Similarity=0.167 Sum_probs=290.6
Q ss_pred CCCcccccCccccccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCcc
Q 041467 3 SNNLLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDI 82 (746)
Q Consensus 3 ~n~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 82 (746)
+|++...++..+..+++|++|+|++|++++..|..|+++++|++|+|++|++++..|..|+++++|++|++++|.+.+..
T Consensus 37 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~ 116 (570)
T 2z63_A 37 FNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLE 116 (570)
T ss_dssp SCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCST
T ss_pred CCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccccccccccCC
Confidence 45566666767788899999999999999888888999999999999999999877889999999999999999987766
Q ss_pred chhhcCCCCCCEEEccCCC-----CcCcccCCCCCCEEeccCCCccc-----ccCCCCC----cEeeCccCcccccCC--
Q 041467 83 LTEICSLFKLERLRIDCGG-----RIDSLGHLKSLLLLSLAFNQFLS-----LSNASSL----EMIEFSRNQFSGGVS-- 146 (746)
Q Consensus 83 ~~~~~~l~~L~~L~l~~~~-----~~~~~~~l~~L~~L~Ls~N~l~~-----l~~l~~L----~~L~Ls~N~l~~~~~-- 146 (746)
+..++++++|++|+++++. .+..++++++|+.|++++|++.. +..+++| +.|++++|.+++..+
T Consensus 117 ~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n~l~~~~~~~ 196 (570)
T 2z63_A 117 NFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGA 196 (570)
T ss_dssp TCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTT
T ss_pred CccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCCCceecCHHH
Confidence 6578999999999998864 24668889999999999998843 3344444 566666665554433
Q ss_pred -------------------------------------------------------------------------------c
Q 041467 147 -------------------------------------------------------------------------------V 147 (746)
Q Consensus 147 -------------------------------------------------------------------------------~ 147 (746)
.
T Consensus 197 ~~~~~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~ 276 (570)
T 2z63_A 197 FKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIID 276 (570)
T ss_dssp TTTCEEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEETTEEESCSTT
T ss_pred hccCcceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhcchhhhhhchh
Confidence 3
Q ss_pred cccCCCCCCEEEccCCCCCCCCCCCccccccccCC--------------------CCCCEEEcccccccccCChhhhhcc
Q 041467 148 DFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNC--------------------SKLERLYFNRNGFEGVLPHSIANLS 207 (746)
Q Consensus 148 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l--------------------~~L~~L~Ls~N~l~~~~p~~~~~l~ 207 (746)
.|..+++|+.|++++|.++. +|..+..+ ++|+.|++++|.+.+..+. ..++
T Consensus 277 ~~~~l~~L~~L~l~~~~l~~-------l~~~~~~~~L~~L~l~~n~~~~l~~~~l~~L~~L~l~~n~~~~~~~~--~~~~ 347 (570)
T 2z63_A 277 LFNCLTNVSSFSLVSVTIER-------VKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSE--VDLP 347 (570)
T ss_dssp TTGGGTTCSEEEEESCEECS-------CCBCCSCCCCSEEEEESCBCSSCCBCBCSSCCEEEEESCBSCCBCCC--CBCT
T ss_pred hhcCcCcccEEEecCccchh-------hhhhhccCCccEEeeccCcccccCcccccccCEEeCcCCcccccccc--ccCC
Confidence 34446777777777777764 23333333 4444444444444433332 3444
Q ss_pred cccceEEcccCcccccC--CccccCCCCCCeeecccccceecCCcCCCCCCCCceeeccccccccccc----ccccccCh
Q 041467 208 STIKQIAMGSNRISSTI--PHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSIL----SSLGNLTL 281 (746)
Q Consensus 208 ~~L~~L~l~~N~i~~~~--p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~----~~l~~l~~ 281 (746)
+|+.|++++|++++.. |..+.++++|++|++++|.+.+..+. +..+++|+.|++++|.+.+..+ ..+.+|+.
T Consensus 348 -~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 425 (570)
T 2z63_A 348 -SLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIY 425 (570)
T ss_dssp -TCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCE
T ss_pred -CCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCE
Confidence 6889999999988654 67888999999999999999866555 8899999999999999987654 33455666
Q ss_pred HHhhhccCCCCCCccccCCCCCCeeeecCCcCc-cccchhhhhcccccceEEccCccccccCchhhhcccCCceeec---
Q 041467 282 QTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLT-STLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNLKNLLRLHI--- 357 (746)
Q Consensus 282 l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l--- 357 (746)
+++.+|.+.+..|..|.++++|++|++++|+++ +.+|..+..+++| +.|++++|++++..|.++..+++|+.|++
T Consensus 426 L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L-~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 504 (570)
T 2z63_A 426 LDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNL-TFLDLSQCQLEQLSPTAFNSLSSLQVLNMASN 504 (570)
T ss_dssp EECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTC-CEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCC-CEEECCCCccccCChhhhhcccCCCEEeCCCC
Confidence 667788898889999999999999999999997 5789889999999 68999999999888999999999999965
Q ss_pred ------CCCCCCCCCCCEEEccCCcCcccCCCC
Q 041467 358 ------PEYPENLSFFELLNLSYNYFGSEVPTK 384 (746)
Q Consensus 358 ------p~~~~~l~~L~~L~ls~N~l~~~~p~~ 384 (746)
|..+..+++|+.|++++|++++..|..
T Consensus 505 ~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~ 537 (570)
T 2z63_A 505 QLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 537 (570)
T ss_dssp CCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTT
T ss_pred cCCCCCHHHhhcccCCcEEEecCCcccCCCcch
Confidence 334678899999999999999998864
No 39
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=2.3e-36 Score=345.44 Aligned_cols=372 Identities=19% Similarity=0.197 Sum_probs=258.4
Q ss_pred CCCcccccCccccccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCcc
Q 041467 3 SNNLLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDI 82 (746)
Q Consensus 3 ~n~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 82 (746)
+|++..+|.... ++|++|+|++|.|++..|..|.++++|++|+|++|+|++..|+.|.++++|++|+|++|.+. .+
T Consensus 40 ~~~L~~ip~~~~---~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~l 115 (562)
T 3a79_B 40 NRNLTHVPKDLP---PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NI 115 (562)
T ss_dssp TSCCCSCCTTSC---TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EE
T ss_pred CCCCccCCCCCC---CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-cc
Confidence 455665554332 67889999999998777788888999999999999998877888888999999999988885 56
Q ss_pred chhhcCCCCCCEEEccCCCCc-----CcccCCCCCCEEeccCCCcc--cccCCCCC--cEeeCccCcc--cccCCccccC
Q 041467 83 LTEICSLFKLERLRIDCGGRI-----DSLGHLKSLLLLSLAFNQFL--SLSNASSL--EMIEFSRNQF--SGGVSVDFSR 151 (746)
Q Consensus 83 ~~~~~~l~~L~~L~l~~~~~~-----~~~~~l~~L~~L~Ls~N~l~--~l~~l~~L--~~L~Ls~N~l--~~~~~~~~~~ 151 (746)
|.. .+++|++|++++|... ..|+++++|+.|+|++|++. .+..+++| +.|+|++|++ ++..|..|..
T Consensus 116 p~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~ 193 (562)
T 3a79_B 116 SCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQLDLLPVAHLHLSCILLDLVSYHIKGGETESLQI 193 (562)
T ss_dssp CSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTTTTGGGTTSCEEEEEEEESSCCCCSSSCCEEEE
T ss_pred Ccc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccCchhhhhhceeeEEEeecccccccccCcccccc
Confidence 665 7888999998886532 46888889999999998884 34555555 8889988888 6666666655
Q ss_pred CC--------------------------CCCEEEccCCCCC------------CCCC-----------C--C-ccccccc
Q 041467 152 LK--------------------------NLSWLNLGVNNLG------------SGTA-----------N--E-LDFINLL 179 (746)
Q Consensus 152 l~--------------------------~L~~L~Ls~N~l~------------~~~~-----------~--~-~~~~~~~ 179 (746)
+. +|+.|++++|... +.+. . . ...+..
T Consensus 194 l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~- 272 (562)
T 3a79_B 194 PNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQF- 272 (562)
T ss_dssp CCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHH-
T ss_pred cCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHh-
Confidence 33 4455555554210 0000 0 0 000011
Q ss_pred cCCCCCCEEEcccccccccCChhh-----hhcc-------------------------cccceEEcccCcccccCCcccc
Q 041467 180 TNCSKLERLYFNRNGFEGVLPHSI-----ANLS-------------------------STIKQIAMGSNRISSTIPHGIR 229 (746)
Q Consensus 180 ~~l~~L~~L~Ls~N~l~~~~p~~~-----~~l~-------------------------~~L~~L~l~~N~i~~~~p~~~~ 229 (746)
...++|++|++++|.++|.+|..+ ..+. .+|+.|++++|.+.... .+.
T Consensus 273 ~~~~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~~~--~~~ 350 (562)
T 3a79_B 273 FWPRPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIHMV--CPP 350 (562)
T ss_dssp HTTSSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCCCC--CCS
T ss_pred hhcccccEEEEeccEeeccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCccccc--Ccc
Confidence 112377888888888877777655 2221 13777777777765321 126
Q ss_pred CCCCCCeeecccccceecCCcCCCCCCCCceeeccccccccc--ccc---cccccChHHhhhccCCCCCCc-cccCCCCC
Q 041467 230 NLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGS--ILS---SLGNLTLQTYLFNNLQGNIPS-SLANCKSL 303 (746)
Q Consensus 230 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~--~~~---~l~~l~~l~~l~n~l~~~~p~-~~~~l~~L 303 (746)
.+++|++|++++|++.+.+|..++++++|++|+|++|++++. .|. .+.+|+.+++.+|++.+.+|. .+..+++|
T Consensus 351 ~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L 430 (562)
T 3a79_B 351 SPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESI 430 (562)
T ss_dssp SCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTC
T ss_pred CCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccC
Confidence 788899999999999888888888899999999999988863 233 344556666668888874554 57788888
Q ss_pred CeeeecCCcCccccchhhhhcccccceEEccCccccccCchhhhcccCCceeecCCCCCCCCCCCEEEccCCcCcccCCC
Q 041467 304 LGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNLKNLLRLHIPEYPENLSFFELLNLSYNYFGSEVPT 383 (746)
Q Consensus 304 ~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~lp~~~~~l~~L~~L~ls~N~l~~~~p~ 383 (746)
+.|++++|++++.+|..+. ..+ +.|+|++|+++ .+|..+. .++.|+.|++++|++++..+.
T Consensus 431 ~~L~l~~n~l~~~~~~~l~--~~L-~~L~L~~N~l~-~ip~~~~---------------~l~~L~~L~L~~N~l~~l~~~ 491 (562)
T 3a79_B 431 LVLNLSSNMLTGSVFRCLP--PKV-KVLDLHNNRIM-SIPKDVT---------------HLQALQELNVASNQLKSVPDG 491 (562)
T ss_dssp CEEECCSSCCCGGGGSSCC--TTC-SEEECCSSCCC-CCCTTTT---------------SSCCCSEEECCSSCCCCCCTT
T ss_pred CEEECCCCCCCcchhhhhc--CcC-CEEECCCCcCc-ccChhhc---------------CCCCCCEEECCCCCCCCCCHH
Confidence 8888888888877776553 456 57888888887 5665554 455667788888888753332
Q ss_pred -CCccCCCCeeeEecCCCcC
Q 041467 384 -KGVFNNKTRFSIIGNGKLC 402 (746)
Q Consensus 384 -~~~~~~~~~~~~~~n~~l~ 402 (746)
...+..+..+++.+|+..|
T Consensus 492 ~~~~l~~L~~L~l~~N~~~c 511 (562)
T 3a79_B 492 VFDRLTSLQYIWLHDNPWDC 511 (562)
T ss_dssp STTTCTTCCCEECCSCCBCC
T ss_pred HHhcCCCCCEEEecCCCcCC
Confidence 3445666677777777655
No 40
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=9.3e-37 Score=345.55 Aligned_cols=348 Identities=18% Similarity=0.187 Sum_probs=267.0
Q ss_pred CCCcccccCccccccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCC-c
Q 041467 3 SNNLLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVR-D 81 (746)
Q Consensus 3 ~n~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~ 81 (746)
+|.+...++..+..+++|++|+|++|++++..|..|+++++|++|||++|+|+ .+|.. .+++|++|+|++|.+.+ .
T Consensus 30 ~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L~~N~l~~~~ 106 (520)
T 2z7x_B 30 QNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV-KISCH--PTVNLKHLDLSFNAFDALP 106 (520)
T ss_dssp SSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC-EEECC--CCCCCSEEECCSSCCSSCC
T ss_pred CCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee-ecCcc--ccCCccEEeccCCcccccc
Confidence 45555555556777899999999999999888999999999999999999999 57766 89999999999999987 5
Q ss_pred cchhhcCCCCCCEEEccCCCCc-CcccCCCCC--CEEeccCCCc-------ccccC------------------------
Q 041467 82 ILTEICSLFKLERLRIDCGGRI-DSLGHLKSL--LLLSLAFNQF-------LSLSN------------------------ 127 (746)
Q Consensus 82 ~~~~~~~l~~L~~L~l~~~~~~-~~~~~l~~L--~~L~Ls~N~l-------~~l~~------------------------ 127 (746)
+|..++++++|++|+++++... ..+..+++| +.|++++|++ ..+..
T Consensus 107 ~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~ 186 (520)
T 2z7x_B 107 ICKEFGNMSQLKFLGLSTTHLEKSSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSV 186 (520)
T ss_dssp CCGGGGGCTTCCEEEEEESSCCGGGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCC
T ss_pred chhhhccCCcceEEEecCcccchhhccccccceeeEEEeecccccccccccccccccccceEEEEeccCcchhhhhhhhh
Confidence 7899999999999999986654 456677777 8888888776 12222
Q ss_pred --CC---------------------------------------------------------CCcEeeCccCcccccCCcc
Q 041467 128 --AS---------------------------------------------------------SLEMIEFSRNQFSGGVSVD 148 (746)
Q Consensus 128 --l~---------------------------------------------------------~L~~L~Ls~N~l~~~~~~~ 148 (746)
++ +|+.|++++|+++|.+|..
T Consensus 187 ~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~ 266 (520)
T 2z7x_B 187 KTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFR 266 (520)
T ss_dssp TTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCC
T ss_pred hcccceeeccccccccccccceeecchhhhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEeecccccCccccc
Confidence 22 4555555555555555555
Q ss_pred c-----cCCCCCCEEEccCCCCCCCCCCCccccccccCC---CCCCEEEcccccccccCChhhhhcccccceEEcccCcc
Q 041467 149 F-----SRLKNLSWLNLGVNNLGSGTANELDFINLLTNC---SKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRI 220 (746)
Q Consensus 149 ~-----~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l---~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i 220 (746)
+ +.+++|+.+++++|.+ ..+. ..+..+ .+|+.|++++|.+.+.. .+..++ +|++|++++|++
T Consensus 267 ~~~~~~~~l~~L~~l~l~~n~~-~~p~------~~~~~~~~~~~L~~L~l~~n~l~~~~--~~~~l~-~L~~L~Ls~n~l 336 (520)
T 2z7x_B 267 DFDYSGTSLKALSIHQVVSDVF-GFPQ------SYIYEIFSNMNIKNFTVSGTRMVHML--CPSKIS-PFLHLDFSNNLL 336 (520)
T ss_dssp CCCCCSCCCCEEEEEEEEECCC-CSCT------HHHHHHHHTCCCSEEEEESSCCCCCC--CCSSCC-CCCEEECCSSCC
T ss_pred hhhcccccCceeEeccccccce-ecch------hhhhcccccCceeEEEcCCCcccccc--chhhCC-cccEEEeECCcc
Confidence 5 5555555555555555 2110 111111 45677777777665321 013555 799999999999
Q ss_pred cccCCccccCCCCCCeeeccccccee--cCCcCCCCCCCCceeeccccccccccccc-c---cccChHHhhhccCCCCCC
Q 041467 221 SSTIPHGIRNLVNLNWLTMESSQLIG--TIPPLIGETPNLQLLNIGGNHLQGSILSS-L---GNLTLQTYLFNNLQGNIP 294 (746)
Q Consensus 221 ~~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~-l---~~l~~l~~l~n~l~~~~p 294 (746)
++.+|..|+++++|++|++++|++.+ .+|..++.+++|++|+|++|.+++.+|.. + .+|+.+++.+|.+++.+|
T Consensus 337 ~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~ 416 (520)
T 2z7x_B 337 TDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIF 416 (520)
T ss_dssp CTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGG
T ss_pred ChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchh
Confidence 99899999999999999999999986 56678999999999999999999855532 3 556667777899988888
Q ss_pred ccccCCCCCCeeeecCCcCccccchhhhhcccccceEEccCccccccCchhhhcccCCceeecCCCCCCCCCCCEEEccC
Q 041467 295 SSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNLKNLLRLHIPEYPENLSFFELLNLSY 374 (746)
Q Consensus 295 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~lp~~~~~l~~L~~L~ls~ 374 (746)
..+. ++|+.|+|++|+|+ .+|..++.+++| +.|++++|+++ .+|.. .+..++.|+.|++++
T Consensus 417 ~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L-~~L~L~~N~l~-~l~~~--------------~~~~l~~L~~L~l~~ 477 (520)
T 2z7x_B 417 RCLP--PRIKVLDLHSNKIK-SIPKQVVKLEAL-QELNVASNQLK-SVPDG--------------IFDRLTSLQKIWLHT 477 (520)
T ss_dssp GSCC--TTCCEEECCSSCCC-CCCGGGGGCTTC-CEEECCSSCCC-CCCTT--------------TTTTCTTCCEEECCS
T ss_pred hhhc--ccCCEEECCCCccc-ccchhhhcCCCC-CEEECCCCcCC-ccCHH--------------HhccCCcccEEECcC
Confidence 7765 79999999999999 899999999999 68999999998 56654 133567789999999
Q ss_pred CcCcccCC
Q 041467 375 NYFGSEVP 382 (746)
Q Consensus 375 N~l~~~~p 382 (746)
|++++..+
T Consensus 478 N~~~c~c~ 485 (520)
T 2z7x_B 478 NPWDCSCP 485 (520)
T ss_dssp SCBCCCHH
T ss_pred CCCcccCC
Confidence 99988655
No 41
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=5.8e-38 Score=355.45 Aligned_cols=175 Identities=19% Similarity=0.244 Sum_probs=155.9
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhh
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKA 549 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~ 549 (746)
.++|++.+.||+|+||.||+ ||||++........+.+.+|+++|+.++|||||+++++|.+.+..|+||||
T Consensus 156 l~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~ 235 (573)
T 3uto_A 156 LDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 235 (573)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence 46899999999999999997 899998765555567789999999999999999999999999999999999
Q ss_pred ccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCC--CCcEEEccccccccccCCCC
Q 041467 550 ISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQ--DVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 550 ~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~--~~~~ki~DfGla~~~~~~~~ 621 (746)
|++|+|. ...+++.++..++.||+.||+|||++ +|+||||||+|||++. .+.+||+|||+|+.+...
T Consensus 236 ~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~-- 310 (573)
T 3uto_A 236 MSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK-- 310 (573)
T ss_dssp CCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTT--
T ss_pred cCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeEccCC--
Confidence 9999984 34689999999999999999999999 9999999999999985 489999999999986322
Q ss_pred CCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......+||+.|||||++.+..|+.+ +||||+||++|
T Consensus 311 -------~~~~~~~GT~~y~APEv~~~~~y~~~---~DiWSlGvily 347 (573)
T 3uto_A 311 -------QSVKVTTGTAEFAAPEVAEGKPVGYY---TDMWSVGVLSY 347 (573)
T ss_dssp -------SEEEEECSSGGGCCHHHHTTCCBCHH---HHHHHHHHHHH
T ss_pred -------CceeeeEECccccCHHHhCCCCCCcH---HHHHHHHHHHH
Confidence 22345789999999999999887655 99999999999
No 42
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=3.8e-36 Score=334.65 Aligned_cols=334 Identities=18% Similarity=0.170 Sum_probs=277.8
Q ss_pred CCCcccccCccccccccccEEecccCcCcccC-chhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCc
Q 041467 3 SNNLLQYSKPLCILRTFLRYINLVNNGFNGEI-PHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRD 81 (746)
Q Consensus 3 ~n~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 81 (746)
+|++...++..+..+++|++|+|++|.+.+.+ |..|.++++|++|+|++|++++..|..|+++++|++|+|++|.+.+.
T Consensus 39 ~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~ 118 (455)
T 3v47_A 39 LNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGA 118 (455)
T ss_dssp SSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTH
T ss_pred CCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEeCCCCCCCcc
Confidence 45566666667778999999999999997555 67899999999999999999988899999999999999999999887
Q ss_pred cchh--hcCCCCCCEEEccCCCCc----Cc-ccCCCCCCEEeccCCCcccc-----cCC--CCCcEeeCccCcccccCCc
Q 041467 82 ILTE--ICSLFKLERLRIDCGGRI----DS-LGHLKSLLLLSLAFNQFLSL-----SNA--SSLEMIEFSRNQFSGGVSV 147 (746)
Q Consensus 82 ~~~~--~~~l~~L~~L~l~~~~~~----~~-~~~l~~L~~L~Ls~N~l~~l-----~~l--~~L~~L~Ls~N~l~~~~~~ 147 (746)
.+.. +.++++|++|++++|... .. +.++++|++|+|++|++..+ ..+ .+|+.|++++|.+.+..+.
T Consensus 119 ~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~ 198 (455)
T 3v47_A 119 VLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEY 198 (455)
T ss_dssp HHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTT
T ss_pred ccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhccccccccccccccCcccccchh
Confidence 6665 999999999999986543 22 88999999999999999543 223 6899999999999976655
Q ss_pred cc--------cCCCCCCEEEccCCCCCCCCCCCccccccccC---CCCCCEEEccccccccc----------CChhhhhc
Q 041467 148 DF--------SRLKNLSWLNLGVNNLGSGTANELDFINLLTN---CSKLERLYFNRNGFEGV----------LPHSIANL 206 (746)
Q Consensus 148 ~~--------~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~---l~~L~~L~Ls~N~l~~~----------~p~~~~~l 206 (746)
.+ ..+++|++|+|++|.+++ ..+..+.. .++|+.|++++|.+.+. .+..+..+
T Consensus 199 ~~~~~~~~~~~~~~~L~~L~Ls~n~l~~------~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (455)
T 3v47_A 199 WLGWEKCGNPFKNTSITTLDLSGNGFKE------SMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGL 272 (455)
T ss_dssp CTTHHHHCCTTTTCEEEEEECTTSCCCH------HHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGG
T ss_pred hccccccccccccceeeeEecCCCcccc------cchhhhhccccccceeeEeeccccccccccchhhhccCcccccccc
Confidence 43 367899999999999976 44444433 37899999998865432 12222222
Q ss_pred c-cccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCCCceeecccccccccccccccc---cChH
Q 041467 207 S-STIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGN---LTLQ 282 (746)
Q Consensus 207 ~-~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~---l~~l 282 (746)
. ..|+.|++++|++++..|..|+++++|++|+|++|++.+..|..|.++++|++|+|++|.+++..+..+.. |+.|
T Consensus 273 ~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 352 (455)
T 3v47_A 273 EASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVL 352 (455)
T ss_dssp TTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEE
T ss_pred cccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEE
Confidence 1 36999999999999989999999999999999999999988999999999999999999998877766554 5555
Q ss_pred HhhhccCCCCCCccccCCCCCCeeeecCCcCccccchhhhhcccccceEEccCccccccCc
Q 041467 283 TYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLP 343 (746)
Q Consensus 283 ~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p 343 (746)
++.+|++.+..|..|..+++|++|+|++|+|++..+..+..+++| ++|++++|++++..|
T Consensus 353 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L-~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 353 DLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSL-QKIWLHTNPWDCSCP 412 (455)
T ss_dssp ECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTC-CEEECCSSCBCCCTT
T ss_pred ECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcc-cEEEccCCCcccCCC
Confidence 666899998889999999999999999999996555566888999 689999999998877
No 43
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=4.1e-35 Score=340.26 Aligned_cols=383 Identities=19% Similarity=0.182 Sum_probs=278.9
Q ss_pred ccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEc
Q 041467 18 TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRI 97 (746)
Q Consensus 18 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 97 (746)
+.+++|||++|+|++..|.+|.++++|++|||++|+|+++.|++|.++++|++|+|++|++.+..+..|.++++|++|+|
T Consensus 52 ~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~L 131 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 131 (635)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEEC
T ss_pred cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEEC
Confidence 47899999999999777789999999999999999999877888999999999999999998777788999999999999
Q ss_pred cCCCCc----CcccCCCCCCEEeccCCCccc------ccCCCCCcEeeCccCcccccCCccccCCCCCC----EEEccCC
Q 041467 98 DCGGRI----DSLGHLKSLLLLSLAFNQFLS------LSNASSLEMIEFSRNQFSGGVSVDFSRLKNLS----WLNLGVN 163 (746)
Q Consensus 98 ~~~~~~----~~~~~l~~L~~L~Ls~N~l~~------l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~----~L~Ls~N 163 (746)
+.|... ..|+++++|+.|+|++|++.. +.++++|+.|+|++|+|++..+..|..+.+++ .++++.|
T Consensus 132 s~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n 211 (635)
T 4g8a_A 132 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 211 (635)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTC
T ss_pred CCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccC
Confidence 986533 468999999999999999843 46789999999999999998888877655443 5667766
Q ss_pred CCCCCCCCCccc--------------------------------------------------------------------
Q 041467 164 NLGSGTANELDF-------------------------------------------------------------------- 175 (746)
Q Consensus 164 ~l~~~~~~~~~~-------------------------------------------------------------------- 175 (746)
.++...+..+..
T Consensus 212 ~l~~i~~~~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~ 291 (635)
T 4g8a_A 212 PMNFIQPGAFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYL 291 (635)
T ss_dssp CCCEECTTTTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECC
T ss_pred cccccCcccccchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhh
Confidence 664332211000
Q ss_pred -----------------------------cccccCCCCCCEEEcccccccccCChhh-------------------hhcc
Q 041467 176 -----------------------------INLLTNCSKLERLYFNRNGFEGVLPHSI-------------------ANLS 207 (746)
Q Consensus 176 -----------------------------~~~~~~l~~L~~L~Ls~N~l~~~~p~~~-------------------~~l~ 207 (746)
...+....+|+.|++++|.+.+..+..+ ..++
T Consensus 292 ~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~~l~ 371 (635)
T 4g8a_A 292 DYYLDGIIDLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLP 371 (635)
T ss_dssp CSCEEECTTTTGGGTTCSEEEEESCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCCBCT
T ss_pred cccccchhhhhhhhcccccccccccccccccccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCccccccc
Confidence 0001122345555555555443222111 1222
Q ss_pred cccceEEcccCccc--ccCCccccCCCCCCeeecccccceecCCcCCCCCCCCceeeccccccccccc----ccccccCh
Q 041467 208 STIKQIAMGSNRIS--STIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSIL----SSLGNLTL 281 (746)
Q Consensus 208 ~~L~~L~l~~N~i~--~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~----~~l~~l~~ 281 (746)
+|+.|++++|.+. +..+..+..+.+|+.|+++.|.... .+..+..+++|+.++++.|......+ ..+.++..
T Consensus 372 -~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~-~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~ 449 (635)
T 4g8a_A 372 -SLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIY 449 (635)
T ss_dssp -TCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEE-ECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCE
T ss_pred -ccccchhhccccccccccccchhhhhhhhhhhcccccccc-ccccccccccccchhhhhcccccccccccccccccccc
Confidence 4555555555553 2234444455555566655555543 34556677778888887776654432 23344455
Q ss_pred HHhhhccCCCCCCccccCCCCCCeeeecCCcCc-cccchhhhhcccccceEEccCccccccCchhhhcccCCceeecC--
Q 041467 282 QTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLT-STLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNLKNLLRLHIP-- 358 (746)
Q Consensus 282 l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~lp-- 358 (746)
++...|++.+..|..+..+++|+.|+|++|++. +.+|..+..+++| ++|+|++|++++..|..|+++++|+.|++.
T Consensus 450 l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L-~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N 528 (635)
T 4g8a_A 450 LDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNL-TFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHN 528 (635)
T ss_dssp EECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTC-CEEECTTSCCCEECTTTTTTCTTCCEEECTTS
T ss_pred ccccccccccccccccccchhhhhhhhhhcccccccCchhhhhcccc-CEEECCCCccCCcChHHHcCCCCCCEEECCCC
Confidence 555678888888888888999999999998754 4567778888888 689999999998888889999999988653
Q ss_pred -------CCCCCCCCCCEEEccCCcCcccCCCCC-cc-CCCCeeeEecCCCcCC
Q 041467 359 -------EYPENLSFFELLNLSYNYFGSEVPTKG-VF-NNKTRFSIIGNGKLCG 403 (746)
Q Consensus 359 -------~~~~~l~~L~~L~ls~N~l~~~~p~~~-~~-~~~~~~~~~~n~~l~~ 403 (746)
..+..+++|+.|||++|+|++.+|... .+ .++..+++.+||+.|.
T Consensus 529 ~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~ 582 (635)
T 4g8a_A 529 NFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 582 (635)
T ss_dssp CCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCS
T ss_pred cCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCccc
Confidence 345678999999999999999888542 23 5688899999998884
No 44
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.9e-35 Score=330.99 Aligned_cols=75 Identities=20% Similarity=0.190 Sum_probs=38.1
Q ss_pred cEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEcc
Q 041467 21 RYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRID 98 (746)
Q Consensus 21 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 98 (746)
+.++.++++++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|.+.+..|..|.++++|++|+|+
T Consensus 14 ~~v~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~ 88 (477)
T 2id5_A 14 RAVLCHRKRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLR 88 (477)
T ss_dssp TEEECCSCCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECC
T ss_pred CEEEeCCCCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECC
Confidence 45555555554 4444332 355555555555555445555555555555555555544444444444444444443
No 45
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.1e-34 Score=324.66 Aligned_cols=307 Identities=21% Similarity=0.191 Sum_probs=243.8
Q ss_pred CCcccccCccccccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccc
Q 041467 4 NNLLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDIL 83 (746)
Q Consensus 4 n~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~ 83 (746)
+++..+|... .+.|++|+|++|++++..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|.+.+..+
T Consensus 21 ~~l~~ip~~~---~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 97 (477)
T 2id5_A 21 KRFVAVPEGI---PTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPL 97 (477)
T ss_dssp CCCSSCCSCC---CTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCT
T ss_pred CCcCcCCCCC---CCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCc
Confidence 4455555433 3579999999999998888999999999999999999998889999999999999999999977666
Q ss_pred hhhcCCCCCCEEEccCCCCc----CcccCCCCCCEEeccCCCcc-----cccCCCCCcEeeCccCcccccCCccccCCCC
Q 041467 84 TEICSLFKLERLRIDCGGRI----DSLGHLKSLLLLSLAFNQFL-----SLSNASSLEMIEFSRNQFSGGVSVDFSRLKN 154 (746)
Q Consensus 84 ~~~~~l~~L~~L~l~~~~~~----~~~~~l~~L~~L~Ls~N~l~-----~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 154 (746)
..|.++++|++|+++.|... ..|.++++|+.|+|++|++. .|.++++|+.|+|++|++++..+..|..+++
T Consensus 98 ~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~ 177 (477)
T 2id5_A 98 GVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHG 177 (477)
T ss_dssp TSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTT
T ss_pred ccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCC
Confidence 67888899999998876543 46778888888888888874 4567788888888888888777777888888
Q ss_pred CCEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCC
Q 041467 155 LSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNL 234 (746)
Q Consensus 155 L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L 234 (746)
|+.|+|++|.+.+. .+..|..+++|+.|++++|.+.+.+|....... +|+.|++++|++++..+..|.++++|
T Consensus 178 L~~L~l~~n~i~~~------~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~-~L~~L~l~~n~l~~~~~~~~~~l~~L 250 (477)
T 2id5_A 178 LIVLRLRHLNINAI------RDYSFKRLYRLKVLEISHWPYLDTMTPNCLYGL-NLTSLSITHCNLTAVPYLAVRHLVYL 250 (477)
T ss_dssp CCEEEEESCCCCEE------CTTCSCSCTTCCEEEEECCTTCCEECTTTTTTC-CCSEEEEESSCCCSCCHHHHTTCTTC
T ss_pred CcEEeCCCCcCcEe------ChhhcccCcccceeeCCCCccccccCcccccCc-cccEEECcCCcccccCHHHhcCcccc
Confidence 88888888888762 334577788888888888877777777666665 68888888888885444577888888
Q ss_pred CeeecccccceecCCcCCCCCCCCceeecccccccccccccccccChHHhhhccCCCCCCccccCCCCCCeeeecCCcCc
Q 041467 235 NWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLT 314 (746)
Q Consensus 235 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 314 (746)
+.|+|++|.+.+..+..|..+++|+.|+|++|++++ ..|..|.++++|+.|+|++|+|+
T Consensus 251 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~---------------------~~~~~~~~l~~L~~L~L~~N~l~ 309 (477)
T 2id5_A 251 RFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAV---------------------VEPYAFRGLNYLRVLNVSGNQLT 309 (477)
T ss_dssp CEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSE---------------------ECTTTBTTCTTCCEEECCSSCCS
T ss_pred CeeECCCCcCCccChhhccccccCCEEECCCCccce---------------------ECHHHhcCcccCCEEECCCCcCc
Confidence 888888888887777778888888888888887763 34556777888888888888888
Q ss_pred cccchhhhhcccccceEEccCccccccC
Q 041467 315 STLPQQILSVTTLSLYLELDNNLLNGSL 342 (746)
Q Consensus 315 ~~~p~~~~~l~~l~~~L~Ls~N~l~~~~ 342 (746)
+..+..+..+.+| +.|+|++|++....
T Consensus 310 ~~~~~~~~~l~~L-~~L~l~~N~l~c~c 336 (477)
T 2id5_A 310 TLEESVFHSVGNL-ETLILDSNPLACDC 336 (477)
T ss_dssp CCCGGGBSCGGGC-CEEECCSSCEECSG
T ss_pred eeCHhHcCCCccc-CEEEccCCCccCcc
Confidence 6555556677777 57888888887543
No 46
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=5.8e-35 Score=323.26 Aligned_cols=273 Identities=21% Similarity=0.227 Sum_probs=184.9
Q ss_pred ccccccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCC-------------CeeeCcCCCC
Q 041467 12 PLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNL-------------IKLSTDSNNL 78 (746)
Q Consensus 12 ~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L-------------~~L~L~~N~l 78 (746)
|.-...++|++|++++|.+ +.+|++|+++++|++|+|++|.++|.+|.+++++.+| ++|++++|.+
T Consensus 5 p~~~~~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l 83 (454)
T 1jl5_A 5 PRNVSNTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGL 83 (454)
T ss_dssp ------------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCC
T ss_pred ccccccccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcc
Confidence 4444568899999999999 7999999999999999999999999999999998875 9999999988
Q ss_pred CCccchhhcCCCCCCEEEccCCCCcCcccCCCCCCEEeccCCCcccccCC-CCCcEeeCccCcccccCCccccCCCCCCE
Q 041467 79 VRDILTEICSLFKLERLRIDCGGRIDSLGHLKSLLLLSLAFNQFLSLSNA-SSLEMIEFSRNQFSGGVSVDFSRLKNLSW 157 (746)
Q Consensus 79 ~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~l-~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 157 (746)
.+ +|.. .++|+.|+++++.....-..+++|+.|++++|++..++.. ++|++|++++|++++ +| .|+.+++|++
T Consensus 84 ~~-lp~~---~~~L~~L~l~~n~l~~lp~~~~~L~~L~l~~n~l~~l~~~~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~ 157 (454)
T 1jl5_A 84 SS-LPEL---PPHLESLVASCNSLTELPELPQSLKSLLVDNNNLKALSDLPPLLEYLGVSNNQLEK-LP-ELQNSSFLKI 157 (454)
T ss_dssp SC-CCSC---CTTCSEEECCSSCCSSCCCCCTTCCEEECCSSCCSCCCSCCTTCCEEECCSSCCSS-CC-CCTTCTTCCE
T ss_pred cc-CCCC---cCCCCEEEccCCcCCccccccCCCcEEECCCCccCcccCCCCCCCEEECcCCCCCC-Cc-ccCCCCCCCE
Confidence 65 4442 3689999998865443223357899999999999888766 589999999999987 56 5999999999
Q ss_pred EEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCee
Q 041467 158 LNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWL 237 (746)
Q Consensus 158 L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L 237 (746)
|++++|++++.+ .. ..+|++|++++|++++ +| .+..++ +|+.|++++|++++ +|... .+|++|
T Consensus 158 L~l~~N~l~~lp-------~~---~~~L~~L~L~~n~l~~-l~-~~~~l~-~L~~L~l~~N~l~~-l~~~~---~~L~~L 220 (454)
T 1jl5_A 158 IDVDNNSLKKLP-------DL---PPSLEFIAAGNNQLEE-LP-ELQNLP-FLTAIYADNNSLKK-LPDLP---LSLESI 220 (454)
T ss_dssp EECCSSCCSCCC-------CC---CTTCCEEECCSSCCSS-CC-CCTTCT-TCCEEECCSSCCSS-CCCCC---TTCCEE
T ss_pred EECCCCcCcccC-------CC---cccccEEECcCCcCCc-Cc-cccCCC-CCCEEECCCCcCCc-CCCCc---CcccEE
Confidence 999999988632 21 2478888888888875 56 477776 68888888888875 55433 477888
Q ss_pred ecccccceecCCcCCCCCCCCceeecccccccccccccccccChHHhhhccCCCCCCccccCCCCCCeeeecCCcCcc
Q 041467 238 TMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTS 315 (746)
Q Consensus 238 ~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 315 (746)
++++|++. .+|. ++.+++|++|++++|++++ +|..+.+++.+++.+|.+.+ +|.. +++|+.|++++|++++
T Consensus 221 ~l~~n~l~-~lp~-~~~l~~L~~L~l~~N~l~~-l~~~~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~ 291 (454)
T 1jl5_A 221 VAGNNILE-ELPE-LQNLPFLTTIYADNNLLKT-LPDLPPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSG 291 (454)
T ss_dssp ECCSSCCS-SCCC-CTTCTTCCEEECCSSCCSS-CCSCCTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSE
T ss_pred ECcCCcCC-cccc-cCCCCCCCEEECCCCcCCc-ccccccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCc
Confidence 88888777 5663 7778888888888888875 44455667777777777775 4443 3667777777777775
No 47
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=6.4e-35 Score=333.44 Aligned_cols=352 Identities=17% Similarity=0.188 Sum_probs=260.1
Q ss_pred CCCcccccCccccccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCC-c
Q 041467 3 SNNLLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVR-D 81 (746)
Q Consensus 3 ~n~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~ 81 (746)
+|++...++..+..+++|++|+|++|+|++..|++|.++++|++|||++|+|+ .+|.. .+++|++|+|++|.+.+ .
T Consensus 61 ~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~ 137 (562)
T 3a79_B 61 QNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLDLSFNDFDVLP 137 (562)
T ss_dssp SSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEECCSSCCSBCC
T ss_pred CCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEECCCCCccccC
Confidence 45666666667788999999999999999888999999999999999999999 57776 89999999999999977 4
Q ss_pred cchhhcCCCCCCEEEccCCCCc-CcccCCCCC--CEEeccCCCc--c-----ccc-------------------------
Q 041467 82 ILTEICSLFKLERLRIDCGGRI-DSLGHLKSL--LLLSLAFNQF--L-----SLS------------------------- 126 (746)
Q Consensus 82 ~~~~~~~l~~L~~L~l~~~~~~-~~~~~l~~L--~~L~Ls~N~l--~-----~l~------------------------- 126 (746)
+|..|+++++|++|+++.+... ..+..+++| +.|+|++|++ . .+.
T Consensus 138 ~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~ 217 (562)
T 3a79_B 138 VCKEFGNLTKLTFLGLSAAKFRQLDLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSV 217 (562)
T ss_dssp CCGGGGGCTTCCEEEEECSBCCTTTTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEE
T ss_pred chHhhcccCcccEEecCCCccccCchhhhhhceeeEEEeecccccccccCcccccccCcceEEEEecCccchhhhhhhcc
Confidence 5689999999999999987654 456666666 8999988877 1 121
Q ss_pred -CCC-------------------------------------------------------CCcEeeCccCcccccCCccc-
Q 041467 127 -NAS-------------------------------------------------------SLEMIEFSRNQFSGGVSVDF- 149 (746)
Q Consensus 127 -~l~-------------------------------------------------------~L~~L~Ls~N~l~~~~~~~~- 149 (746)
+++ +|++|++++|+++|.+|..+
T Consensus 218 ~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~ip~~~~ 297 (562)
T 3a79_B 218 NALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQFFWPRPVEYLNIYNLTITERIDREEF 297 (562)
T ss_dssp SSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHHHTTSSEEEEEEEEEEECSCCCCCCC
T ss_pred cccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHhhhcccccEEEEeccEeeccccchhh
Confidence 122 34444444444444444443
Q ss_pred ----cCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCC
Q 041467 150 ----SRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIP 225 (746)
Q Consensus 150 ----~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p 225 (746)
..++.|+.++++.|.+ ..+. .....+....+|+.|++++|.+..... ...++ +|++|++++|++++.+|
T Consensus 298 ~~~~~~L~~L~~~~~~~~~~-~~p~---~~~~~~~~~~~L~~L~l~~n~~~~~~~--~~~l~-~L~~L~l~~n~l~~~~~ 370 (562)
T 3a79_B 298 TYSETALKSLMIEHVKNQVF-LFSK---EALYSVFAEMNIKMLSISDTPFIHMVC--PPSPS-SFTFLNFTQNVFTDSVF 370 (562)
T ss_dssp CCCSCSCCEEEEEEEEECCC-SSCH---HHHHHHHHTCCCSEEEEESSCCCCCCC--CSSCC-CCCEEECCSSCCCTTTT
T ss_pred hcccccchheehhhccccee-ecCh---hhhhhhhccCcceEEEccCCCcccccC--ccCCC-CceEEECCCCccccchh
Confidence 3333333333333333 1000 000001112568899999998763221 13454 68999999999998888
Q ss_pred ccccCCCCCCeeeccccccee--cCCcCCCCCCCCceeecccccccccccc----cccccChHHhhhccCCCCCCccccC
Q 041467 226 HGIRNLVNLNWLTMESSQLIG--TIPPLIGETPNLQLLNIGGNHLQGSILS----SLGNLTLQTYLFNNLQGNIPSSLAN 299 (746)
Q Consensus 226 ~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~~~----~l~~l~~l~~l~n~l~~~~p~~~~~ 299 (746)
..|+++++|++|+|++|++.+ .+|..++.+++|++|++++|++++.+|. .+.+|+.+++.+|++++.+|..+.
T Consensus 371 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~- 449 (562)
T 3a79_B 371 QGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP- 449 (562)
T ss_dssp TTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC-
T ss_pred hhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc-
Confidence 889999999999999999886 3356788899999999999999874443 234566666668888877776655
Q ss_pred CCCCCeeeecCCcCccccchhhhhcccccceEEccCccccccCchhhhcccCCceeecCCCCCCCCCCCEEEccCCcCcc
Q 041467 300 CKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNLKNLLRLHIPEYPENLSFFELLNLSYNYFGS 379 (746)
Q Consensus 300 l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~lp~~~~~l~~L~~L~ls~N~l~~ 379 (746)
++|++|+|++|+|+ .+|..++.++.| +.|+|++|+++ .+|... +..++.|+.|++++|.+.+
T Consensus 450 -~~L~~L~L~~N~l~-~ip~~~~~l~~L-~~L~L~~N~l~-~l~~~~--------------~~~l~~L~~L~l~~N~~~c 511 (562)
T 3a79_B 450 -PKVKVLDLHNNRIM-SIPKDVTHLQAL-QELNVASNQLK-SVPDGV--------------FDRLTSLQYIWLHDNPWDC 511 (562)
T ss_dssp -TTCSEEECCSSCCC-CCCTTTTSSCCC-SEEECCSSCCC-CCCTTS--------------TTTCTTCCCEECCSCCBCC
T ss_pred -CcCCEEECCCCcCc-ccChhhcCCCCC-CEEECCCCCCC-CCCHHH--------------HhcCCCCCEEEecCCCcCC
Confidence 78999999999998 799988999999 68999999998 566551 3456677889999999998
Q ss_pred cCCC
Q 041467 380 EVPT 383 (746)
Q Consensus 380 ~~p~ 383 (746)
..|.
T Consensus 512 ~c~~ 515 (562)
T 3a79_B 512 TCPG 515 (562)
T ss_dssp CHHH
T ss_pred Ccch
Confidence 7774
No 48
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=3.6e-34 Score=317.16 Aligned_cols=331 Identities=18% Similarity=0.179 Sum_probs=237.2
Q ss_pred cccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCE
Q 041467 15 ILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLER 94 (746)
Q Consensus 15 ~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 94 (746)
..+++|++|+|++|.+++ +| .|+.+++|++|+|++|+|++ +| ++.+++|++|++++|.+.+. + ++++++|++
T Consensus 39 ~~l~~L~~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~ 110 (457)
T 3bz5_A 39 EQLATLTSLDCHNSSITD-MT-GIEKLTGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTY 110 (457)
T ss_dssp HHHTTCCEEECCSSCCCC-CT-TGGGCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCE
T ss_pred hHcCCCCEEEccCCCccc-Ch-hhcccCCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCcee-e--cCCCCcCCE
Confidence 447899999999999985 46 69999999999999999996 45 89999999999999999774 3 889999999
Q ss_pred EEccCCCCc-CcccCCCCCCEEeccCCCccc--ccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCC
Q 041467 95 LRIDCGGRI-DSLGHLKSLLLLSLAFNQFLS--LSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTAN 171 (746)
Q Consensus 95 L~l~~~~~~-~~~~~l~~L~~L~Ls~N~l~~--l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 171 (746)
|++++|... -.++++++|+.|++++|++.. +.++++|++|++++|+..+.+ .++.+++|++|++++|++++.
T Consensus 111 L~L~~N~l~~l~~~~l~~L~~L~l~~N~l~~l~l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~l--- 185 (457)
T 3bz5_A 111 LNCDTNKLTKLDVSQNPLLTYLNCARNTLTEIDVSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITEL--- 185 (457)
T ss_dssp EECCSSCCSCCCCTTCTTCCEEECTTSCCSCCCCTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCCC---
T ss_pred EECCCCcCCeecCCCCCcCCEEECCCCccceeccccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCcccee---
Confidence 999886543 237889999999999999965 567889999999999655555 478899999999999999862
Q ss_pred CccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcC
Q 041467 172 ELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPL 251 (746)
Q Consensus 172 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 251 (746)
+ +..+++|+.|++++|++++. .+..++ +|+.|++++|++++ +| ++.+++|++|++++|++.+..+..
T Consensus 186 ----~--l~~l~~L~~L~l~~N~l~~~---~l~~l~-~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~~ 252 (457)
T 3bz5_A 186 ----D--VSQNKLLNRLNCDTNNITKL---DLNQNI-QLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVST 252 (457)
T ss_dssp ----C--CTTCTTCCEEECCSSCCSCC---CCTTCT-TCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCTT
T ss_pred ----c--cccCCCCCEEECcCCcCCee---ccccCC-CCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCHHH
Confidence 2 67788999999999999864 367776 79999999999997 66 888999999999999998765544
Q ss_pred CCCCC-------CCceeeccccccccccc-ccccccChHHhhhccCCCCCCc--------cccCCCCCCeeeecCCcCcc
Q 041467 252 IGETP-------NLQLLNIGGNHLQGSIL-SSLGNLTLQTYLFNNLQGNIPS--------SLANCKSLLGLSVSHNKLTS 315 (746)
Q Consensus 252 ~~~l~-------~L~~L~Ls~N~l~~~~~-~~l~~l~~l~~l~n~l~~~~p~--------~~~~l~~L~~L~Ls~N~l~~ 315 (746)
+.++. +|+.|++++|.+.+.+| ..+.+|+.+++.+|...+.+|. .++++++|+.|++++|+|++
T Consensus 253 l~~L~~L~l~~n~L~~L~l~~n~~~~~~~~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~~L~L~~N~l~~ 332 (457)
T 3bz5_A 253 LSKLTTLHCIQTDLLEIDLTHNTQLIYFQAEGCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLNNTELTE 332 (457)
T ss_dssp CTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCTTCCCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCCCSC
T ss_pred CCCCCEEeccCCCCCEEECCCCccCCcccccccccCCEEECCCCcccceeccCCCcceEechhhcccCCEEECCCCcccc
Confidence 44433 44555555555544443 2234455555555555554443 24445566666666666665
Q ss_pred ccchhhhhcccccceEEccCccccccCchhhhcccCCceeecCCC----CCCCCCCCEEEccCCcCcccCCC
Q 041467 316 TLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNLKNLLRLHIPEY----PENLSFFELLNLSYNYFGSEVPT 383 (746)
Q Consensus 316 ~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~lp~~----~~~l~~L~~L~ls~N~l~~~~p~ 383 (746)
+| +..++.| +.|++++|++++ +| .|..|.+... ...+..++.+++++|+++|.+|.
T Consensus 333 -l~--l~~l~~L-~~L~l~~N~l~~-l~-------~L~~L~l~~n~l~g~~~~~~l~~l~l~~N~l~g~ip~ 392 (457)
T 3bz5_A 333 -LD--VSHNTKL-KSLSCVNAHIQD-FS-------SVGKIPALNNNFEAEGQTITMPKETLTNNSLTIAVSP 392 (457)
T ss_dssp -CC--CTTCTTC-SEEECCSSCCCB-CT-------TGGGSSGGGTSEEEEEEEEECCCBCCBTTBEEEECCT
T ss_pred -cc--cccCCcC-cEEECCCCCCCC-cc-------ccccccccCCcEEecceeeecCccccccCcEEEEcCh
Confidence 33 5666666 456666666664 21 1111111000 01233455666777777776664
No 49
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=3.3e-36 Score=319.10 Aligned_cols=178 Identities=20% Similarity=0.286 Sum_probs=156.1
Q ss_pred hhhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccc
Q 041467 477 KATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 477 ~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~l 545 (746)
...++|+..+.||+|+||.||+ ||||++.... ....+++.+|+++++.++||||+++++++...+..++
T Consensus 12 ~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~l 91 (328)
T 3fe3_A 12 PHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYL 91 (328)
T ss_dssp CEETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred CccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEE
Confidence 3467899999999999999996 9999986542 3445678999999999999999999999999999999
Q ss_pred hhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCC
Q 041467 546 DFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620 (746)
Q Consensus 546 v~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~ 620 (746)
||||+++|++. ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+|+.....
T Consensus 92 v~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~- 167 (328)
T 3fe3_A 92 IMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVG- 167 (328)
T ss_dssp EECCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSS-
T ss_pred EEECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecCCC-
Confidence 99999999985 46799999999999999999999999 9999999999999999999999999999875321
Q ss_pred CCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 621 PGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 621 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......+||++|+|||++.+..++ ++++||||+||++|
T Consensus 168 --------~~~~~~~gt~~y~aPE~~~~~~~~--~~~~DiwslG~il~ 205 (328)
T 3fe3_A 168 --------GKLDAFCGAPPYAAPELFQGKKYD--GPEVDVWSLGVILY 205 (328)
T ss_dssp --------CGGGTTSSSGGGCCHHHHHTCCCC--SHHHHHHHHHHHHH
T ss_pred --------CccccccCCcceeCcccccCCCcC--CchhhhhhhHHHHH
Confidence 123347899999999999988764 23699999999998
No 50
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=1.2e-33 Score=315.07 Aligned_cols=336 Identities=22% Similarity=0.303 Sum_probs=252.8
Q ss_pred cccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEE
Q 041467 17 RTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLR 96 (746)
Q Consensus 17 ~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 96 (746)
+++|+.|++++|.+. .+|. +..+++|++|+|++|.+++. |. +.++++|++|++++|.+.+..+ +.++++|++|+
T Consensus 45 l~~l~~L~l~~~~i~-~l~~-~~~l~~L~~L~Ls~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~ 118 (466)
T 1o6v_A 45 LDQVTTLQADRLGIK-SIDG-VEYLNNLTQINFSNNQLTDI-TP-LKNLTKLVDILMNNNQIADITP--LANLTNLTGLT 118 (466)
T ss_dssp HHTCCEEECCSSCCC-CCTT-GGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEE
T ss_pred hccccEEecCCCCCc-cCcc-hhhhcCCCEEECCCCccCCc-hh-hhccccCCEEECCCCccccChh--hcCCCCCCEEE
Confidence 578899999999987 4664 88899999999999999864 44 8899999999999998876554 88999999999
Q ss_pred ccCCCCc--CcccCCCCCCEEeccCCCcc---cccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCC
Q 041467 97 IDCGGRI--DSLGHLKSLLLLSLAFNQFL---SLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTAN 171 (746)
Q Consensus 97 l~~~~~~--~~~~~l~~L~~L~Ls~N~l~---~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 171 (746)
++++... ..+.++++|+.|++++|.+. .+..+++|+.|+++ |.+.+.. .+..+++|++|++++|.++..
T Consensus 119 L~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~-~~~~~~~--~~~~l~~L~~L~l~~n~l~~~--- 192 (466)
T 1o6v_A 119 LFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLK--PLANLTTLERLDISSNKVSDI--- 192 (466)
T ss_dssp CCSSCCCCCGGGTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEE-ESCCCCG--GGTTCTTCCEEECCSSCCCCC---
T ss_pred CCCCCCCCChHHcCCCCCCEEECCCCccCCChhhccCCcccEeecC-CcccCch--hhccCCCCCEEECcCCcCCCC---
Confidence 9886543 44888999999999999884 45678899999986 5565443 388899999999999988752
Q ss_pred CccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcC
Q 041467 172 ELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPL 251 (746)
Q Consensus 172 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 251 (746)
..+..+++|++|++++|.+++..| ++.++ +|+.|++++|++++ + +.+..+++|++|++++|.+.+..|
T Consensus 193 -----~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~-~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~l~~n~l~~~~~-- 260 (466)
T 1o6v_A 193 -----SVLAKLTNLESLIATNNQISDITP--LGILT-NLDELSLNGNQLKD-I-GTLASLTNLTDLDLANNQISNLAP-- 260 (466)
T ss_dssp -----GGGGGCTTCSEEECCSSCCCCCGG--GGGCT-TCCEEECCSSCCCC-C-GGGGGCTTCSEEECCSSCCCCCGG--
T ss_pred -----hhhccCCCCCEEEecCCccccccc--ccccC-CCCEEECCCCCccc-c-hhhhcCCCCCEEECCCCccccchh--
Confidence 237788899999999999886555 66666 79999999999885 3 468888999999999999886654
Q ss_pred CCCCCCCceeeccccccccccc-ccccccChHHhhhccCCCCCCccccCCCCCCeeeecCCcCccccchhhhhcccccce
Q 041467 252 IGETPNLQLLNIGGNHLQGSIL-SSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLY 330 (746)
Q Consensus 252 ~~~l~~L~~L~Ls~N~l~~~~~-~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~ 330 (746)
+..+++|+.|++++|.+++..+ ..+.+|+.|++.+|++.+..| ++.+++|+.|++++|++++..| +..+++| +.
T Consensus 261 ~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L-~~ 335 (466)
T 1o6v_A 261 LSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKL-QR 335 (466)
T ss_dssp GTTCTTCSEEECCSSCCCCCGGGTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTC-CE
T ss_pred hhcCCCCCEEECCCCccCccccccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccC-CE
Confidence 7888999999999998886543 234445555556777776544 7778888888888888876544 6677777 57
Q ss_pred EEccCccccccCchhhhcccCCceeecCCCCCCCCCCCEEEccCCcCcccCCCCCccCCCCeeeEecCC
Q 041467 331 LELDNNLLNGSLPPEVGNLKNLLRLHIPEYPENLSFFELLNLSYNYFGSEVPTKGVFNNKTRFSIIGNG 399 (746)
Q Consensus 331 L~Ls~N~l~~~~p~~~~~l~~L~~L~lp~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~n~ 399 (746)
|++++|.+++. ..+. .++.|+.|++++|++++.+| ...+..+..+.+.+|+
T Consensus 336 L~l~~n~l~~~--~~l~---------------~l~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~ 386 (466)
T 1o6v_A 336 LFFYNNKVSDV--SSLA---------------NLTNINWLSAGHNQISDLTP-LANLTRITQLGLNDQA 386 (466)
T ss_dssp EECCSSCCCCC--GGGT---------------TCTTCCEEECCSSCCCBCGG-GTTCTTCCEEECCCEE
T ss_pred eECCCCccCCc--hhhc---------------cCCCCCEEeCCCCccCccch-hhcCCCCCEEeccCCc
Confidence 88888888753 2344 34555666666666666655 3344555555555543
No 51
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=1.4e-33 Score=327.44 Aligned_cols=376 Identities=21% Similarity=0.160 Sum_probs=287.5
Q ss_pred CCCCcccccCccccccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCc
Q 041467 2 SSNNLLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRD 81 (746)
Q Consensus 2 ~~n~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 81 (746)
++|++..+++..+..+++|++|||++|+|+++.|.+|.++++|++|+|++|+|++..|..|.++++|++|+|++|++.+.
T Consensus 60 s~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l 139 (635)
T 4g8a_A 60 SFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASL 139 (635)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCS
T ss_pred eCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCC
Confidence 35667777777888899999999999999988888999999999999999999987778899999999999999999887
Q ss_pred cchhhcCCCCCCEEEccCCCC-----cCcccCCCCCCEEeccCCCcccc-----cCCC----CCcEeeCccCcccccCCc
Q 041467 82 ILTEICSLFKLERLRIDCGGR-----IDSLGHLKSLLLLSLAFNQFLSL-----SNAS----SLEMIEFSRNQFSGGVSV 147 (746)
Q Consensus 82 ~~~~~~~l~~L~~L~l~~~~~-----~~~~~~l~~L~~L~Ls~N~l~~l-----~~l~----~L~~L~Ls~N~l~~~~~~ 147 (746)
.+..|+++++|++|+++.|.. +..++.+++|+.|+|++|++..+ ..+. .+..++++.|.++...+.
T Consensus 140 ~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~ 219 (635)
T 4g8a_A 140 ENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPG 219 (635)
T ss_dssp TTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTT
T ss_pred ChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccccCcc
Confidence 777899999999999998653 35678899999999999998432 1111 122344444433321111
Q ss_pred --------------------------------------------------------------------------------
Q 041467 148 -------------------------------------------------------------------------------- 147 (746)
Q Consensus 148 -------------------------------------------------------------------------------- 147 (746)
T Consensus 220 ~~~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~ 299 (635)
T 4g8a_A 220 AFKEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGII 299 (635)
T ss_dssp TTTTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECT
T ss_pred cccchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchh
Confidence
Q ss_pred -----------------------cccCCCCCCEEEccCCCCCCCCCCCcc-------------ccccccCCCCCCEEEcc
Q 041467 148 -----------------------DFSRLKNLSWLNLGVNNLGSGTANELD-------------FINLLTNCSKLERLYFN 191 (746)
Q Consensus 148 -----------------------~~~~l~~L~~L~Ls~N~l~~~~~~~~~-------------~~~~~~~l~~L~~L~Ls 191 (746)
.+....+|+.|++++|.+.......+. .+.....+++|+.|+++
T Consensus 300 ~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~~l~~L~~L~ls 379 (635)
T 4g8a_A 300 DLFNCLTNVSSFSLVSVTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLS 379 (635)
T ss_dssp TTTGGGTTCSEEEEESCEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCCBCTTCCEEECC
T ss_pred hhhhhhcccccccccccccccccccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCcccccccccccchhh
Confidence 122334566677777666543322110 11123467899999999
Q ss_pred ccccc--ccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCC-cCCCCCCCCceeecccccc
Q 041467 192 RNGFE--GVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIP-PLIGETPNLQLLNIGGNHL 268 (746)
Q Consensus 192 ~N~l~--~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l 268 (746)
+|.+. +..+..+..+. +|+.+++..|.+.. .+..+..+++|+.++++.|+.....+ ..|..+++++.++++.|.+
T Consensus 380 ~n~l~~~~~~~~~~~~~~-~L~~L~~~~~~~~~-~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l 457 (635)
T 4g8a_A 380 RNGLSFKGCCSQSDFGTI-SLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHT 457 (635)
T ss_dssp SSCCBEEEECCHHHHSCS-CCCEEECCSCSEEE-ECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCC
T ss_pred ccccccccccccchhhhh-hhhhhhcccccccc-ccccccccccccchhhhhcccccccccccccccccccccccccccc
Confidence 99885 34567777776 69999999998874 56678889999999998888776554 4578888999999999998
Q ss_pred cccccccccc---cChHHhhhcc-CCCCCCccccCCCCCCeeeecCCcCccccchhhhhcccccceEEccCccccccCch
Q 041467 269 QGSILSSLGN---LTLQTYLFNN-LQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPP 344 (746)
Q Consensus 269 ~~~~~~~l~~---l~~l~~l~n~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~ 344 (746)
.+..+..+.. ++.+++.+|+ ..+.+|..|..+++|++|+|++|+|++..|..+..+++| +.|+|++|+|++..|.
T Consensus 458 ~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L-~~L~Ls~N~l~~l~~~ 536 (635)
T 4g8a_A 458 RVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSL-QVLNMSHNNFFSLDTF 536 (635)
T ss_dssp EECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTC-CEEECTTSCCCBCCCG
T ss_pred ccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCC-CEEECCCCcCCCCChh
Confidence 8777665544 4445555665 444578888999999999999999998788888888888 6899999999888888
Q ss_pred hhhcccCCceeec---------CCCCCCC-CCCCEEEccCCcCccc
Q 041467 345 EVGNLKNLLRLHI---------PEYPENL-SFFELLNLSYNYFGSE 380 (746)
Q Consensus 345 ~~~~l~~L~~L~l---------p~~~~~l-~~L~~L~ls~N~l~~~ 380 (746)
.|.++++|+.|++ |..+..+ ++|+.|+|++|.++..
T Consensus 537 ~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~ 582 (635)
T 4g8a_A 537 PYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 582 (635)
T ss_dssp GGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCS
T ss_pred HHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCccc
Confidence 8889999998865 4455566 6899999999999764
No 52
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=4.2e-34 Score=328.59 Aligned_cols=335 Identities=17% Similarity=0.135 Sum_probs=266.2
Q ss_pred ccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEE
Q 041467 16 LRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERL 95 (746)
Q Consensus 16 ~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 95 (746)
.+++++.|++++|.+....+..|.++++|++|+|++|.|++..|..|+.+++|++|+|++|.+.+..|..|+++++|++|
T Consensus 49 ~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 128 (597)
T 3oja_B 49 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 128 (597)
T ss_dssp GGCCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred cCCCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEE
Confidence 35789999999999986666778999999999999999998888899999999999999999988888888999999999
Q ss_pred EccCCCCc----CcccCCCCCCEEeccCCCcc-----cccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCC
Q 041467 96 RIDCGGRI----DSLGHLKSLLLLSLAFNQFL-----SLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLG 166 (746)
Q Consensus 96 ~l~~~~~~----~~~~~l~~L~~L~Ls~N~l~-----~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 166 (746)
+|++|... ..|+++++|+.|+|++|.+. .|.++++|+.|+|++|.+++.. ++.+++|+.|++++|.++
T Consensus 129 ~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~---~~~l~~L~~L~l~~n~l~ 205 (597)
T 3oja_B 129 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLS 205 (597)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCC---GGGCTTCSEEECCSSCCS
T ss_pred EeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcC---hhhhhhhhhhhcccCccc
Confidence 99886533 33688889999999999884 3567888999999999888653 556788889999988886
Q ss_pred CCCCCCccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeeccccccee
Q 041467 167 SGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIG 246 (746)
Q Consensus 167 ~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~ 246 (746)
+ +...++|+.|++++|.++.. |..+ ..+|+.|++++|.+++ +.++..+++|+.|+|++|.+.+
T Consensus 206 ~-----------l~~~~~L~~L~ls~n~l~~~-~~~~---~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~~ 268 (597)
T 3oja_B 206 T-----------LAIPIAVEELDASHNSINVV-RGPV---NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELEK 268 (597)
T ss_dssp E-----------EECCTTCSEEECCSSCCCEE-ECSC---CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCCE
T ss_pred c-----------ccCCchhheeeccCCccccc-cccc---CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccCC
Confidence 5 33456788999999988743 3322 1368889999998886 4678888999999999999988
Q ss_pred cCCcCCCCCCCCceeecccccccccccccccccChHHhhhccCCCCCCccccCCCCCCeeeecCCcCccccchhhhhccc
Q 041467 247 TIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTT 326 (746)
Q Consensus 247 ~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 326 (746)
..|..|+.+++|+.|+|++|.+++ +|..+..+++|+.|+|++|.++ .+|..+..++.
T Consensus 269 ~~~~~~~~l~~L~~L~Ls~N~l~~----------------------l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~ 325 (597)
T 3oja_B 269 IMYHPFVKMQRLERLYISNNRLVA----------------------LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDR 325 (597)
T ss_dssp EESGGGTTCSSCCEEECTTSCCCE----------------------EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTT
T ss_pred CCHHHhcCccCCCEEECCCCCCCC----------------------CCcccccCCCCcEEECCCCCCC-ccCcccccCCC
Confidence 888888889999999999888873 3445567889999999999998 68999999999
Q ss_pred ccceEEccCccccccCchhhhcccCCceeecCCCCCCCCCCCEEEccCCcCcccCCCCCccCCCCeeeEecCCCcCCCCC
Q 041467 327 LSLYLELDNNLLNGSLPPEVGNLKNLLRLHIPEYPENLSFFELLNLSYNYFGSEVPTKGVFNNKTRFSIIGNGKLCGGLD 406 (746)
Q Consensus 327 l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~lp~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~l~~~~~ 406 (746)
| .+|+|++|.+++ +| +..++.|+.|++++|.+++..+. ..+.......+.++...|+...
T Consensus 326 L-~~L~L~~N~l~~-~~-----------------~~~~~~L~~L~l~~N~~~~~~~~-~~~~~~~~~~~~~~~~~C~~~~ 385 (597)
T 3oja_B 326 L-ENLYLDHNSIVT-LK-----------------LSTHHTLKNLTLSHNDWDCNSLR-ALFRNVARPAVDDADQHCKIDY 385 (597)
T ss_dssp C-SEEECCSSCCCC-CC-----------------CCTTCCCSEEECCSSCEEHHHHH-HHTTTCCTTTBCCCCCCCCTTC
T ss_pred C-CEEECCCCCCCC-cC-----------------hhhcCCCCEEEeeCCCCCChhHH-HHHHHHhhhccccccccCCcch
Confidence 9 689999999974 22 23567889999999999876432 2233444444567777887644
Q ss_pred CCCCCcc
Q 041467 407 ELHLPSC 413 (746)
Q Consensus 407 ~~~~~~~ 413 (746)
......|
T Consensus 386 ~~~~~~c 392 (597)
T 3oja_B 386 QLEHGLC 392 (597)
T ss_dssp EEETTEE
T ss_pred hccCCcc
Confidence 3333333
No 53
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=5.6e-34 Score=310.38 Aligned_cols=325 Identities=18% Similarity=0.143 Sum_probs=257.5
Q ss_pred ccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEE
Q 041467 16 LRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERL 95 (746)
Q Consensus 16 ~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 95 (746)
.++++++|++++|.++...+..|..+++|++|+|++|.+++..|..|..+++|++|+|++|.+.+..|..+.++++|++|
T Consensus 43 ~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 122 (390)
T 3o6n_A 43 TLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVL 122 (390)
T ss_dssp GGCCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEE
T ss_pred ccCCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEE
Confidence 36889999999999985555568999999999999999998777899999999999999999988888889999999999
Q ss_pred EccCCCCc----CcccCCCCCCEEeccCCCccc-----ccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCC
Q 041467 96 RIDCGGRI----DSLGHLKSLLLLSLAFNQFLS-----LSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLG 166 (746)
Q Consensus 96 ~l~~~~~~----~~~~~l~~L~~L~Ls~N~l~~-----l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 166 (746)
+++++... ..|.++++|++|+|++|++.. +.++++|+.|++++|++++. .+..+++|+.|++++|.++
T Consensus 123 ~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~ 199 (390)
T 3o6n_A 123 VLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLS 199 (390)
T ss_dssp ECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCS
T ss_pred ECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCcc---ccccccccceeeccccccc
Confidence 99886543 236788899999999998843 56788899999999988864 3566788899999988886
Q ss_pred CCCCCCccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeeccccccee
Q 041467 167 SGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIG 246 (746)
Q Consensus 167 ~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~ 246 (746)
+ +...++|+.|++++|.++.. |... . .+|+.|++++|++++. ..+.++++|++|+|++|.+.+
T Consensus 200 ~-----------~~~~~~L~~L~l~~n~l~~~-~~~~--~-~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~ 262 (390)
T 3o6n_A 200 T-----------LAIPIAVEELDASHNSINVV-RGPV--N-VELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEK 262 (390)
T ss_dssp E-----------EECCSSCSEEECCSSCCCEE-ECCC--C-SSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCE
T ss_pred c-----------cCCCCcceEEECCCCeeeec-cccc--c-ccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCC
Confidence 5 33446789999999988744 4332 2 3688999999998863 578888999999999999988
Q ss_pred cCCcCCCCCCCCceeecccccccccccccccccChHHhhhccCCCCCCccccCCCCCCeeeecCCcCccccchhhhhccc
Q 041467 247 TIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTT 326 (746)
Q Consensus 247 ~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 326 (746)
..|..|..+++|+.|+|++|++++ +|..+..+++|++|+|++|+++ .+|..+..++.
T Consensus 263 ~~~~~~~~l~~L~~L~L~~n~l~~----------------------~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~ 319 (390)
T 3o6n_A 263 IMYHPFVKMQRLERLYISNNRLVA----------------------LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDR 319 (390)
T ss_dssp EESGGGTTCSSCCEEECCSSCCCE----------------------EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTT
T ss_pred cChhHccccccCCEEECCCCcCcc----------------------cCcccCCCCCCCEEECCCCcce-ecCccccccCc
Confidence 888888889999999999988873 3444567889999999999998 68888999999
Q ss_pred ccceEEccCccccccCchhhhcccCCceeecCCCCCCCCCCCEEEccCCcCcccCCCCCccCCCCeeeEecCCCcCC
Q 041467 327 LSLYLELDNNLLNGSLPPEVGNLKNLLRLHIPEYPENLSFFELLNLSYNYFGSEVPTKGVFNNKTRFSIIGNGKLCG 403 (746)
Q Consensus 327 l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~lp~~~~~l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~l~~ 403 (746)
| +.|++++|++++ +| +..++.|+.|++++|+++..... ..+.......+.++...|+
T Consensus 320 L-~~L~L~~N~i~~-~~-----------------~~~~~~L~~L~l~~N~~~~~~~~-~~~~~~~~~~~~~~~~~c~ 376 (390)
T 3o6n_A 320 L-ENLYLDHNSIVT-LK-----------------LSTHHTLKNLTLSHNDWDCNSLR-ALFRNVARPAVDDADQHCK 376 (390)
T ss_dssp C-SEEECCSSCCCC-CC-----------------CCTTCCCSEEECCSSCEEHHHHH-HHTTTCCTTTBCCCCSCCC
T ss_pred C-CEEECCCCccce-eC-----------------chhhccCCEEEcCCCCccchhHH-HHHHHHHhhcccccCceec
Confidence 9 689999999973 32 23567789999999999874321 1233333333445555554
No 54
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=2e-33 Score=313.37 Aligned_cols=321 Identities=26% Similarity=0.340 Sum_probs=272.0
Q ss_pred ccccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCC
Q 041467 14 CILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLE 93 (746)
Q Consensus 14 ~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 93 (746)
+..+++|++|+|++|.+++. |. +.++++|++|+|++|.+++..| ++++++|++|++++|.+.+..+ +.++++|+
T Consensus 64 ~~~l~~L~~L~Ls~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~ 137 (466)
T 1o6v_A 64 VEYLNNLTQINFSNNQLTDI-TP-LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLN 137 (466)
T ss_dssp GGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCS
T ss_pred hhhhcCCCEEECCCCccCCc-hh-hhccccCCEEECCCCccccChh--hcCCCCCCEEECCCCCCCCChH--HcCCCCCC
Confidence 55689999999999999854 44 9999999999999999996544 9999999999999999976543 89999999
Q ss_pred EEEccCCCC--cCcccCCCCCCEEeccCCCc---ccccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCC
Q 041467 94 RLRIDCGGR--IDSLGHLKSLLLLSLAFNQF---LSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSG 168 (746)
Q Consensus 94 ~L~l~~~~~--~~~~~~l~~L~~L~Ls~N~l---~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 168 (746)
+|+++.+.. +..++++++|+.|+++ |.+ ..+.++++|+.|++++|++++. ..+..+++|++|++++|.+++.
T Consensus 138 ~L~l~~n~l~~~~~~~~l~~L~~L~l~-~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~ 214 (466)
T 1o6v_A 138 RLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKPLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDI 214 (466)
T ss_dssp EEEEEEEEECCCGGGTTCTTCSEEEEE-ESCCCCGGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCC
T ss_pred EEECCCCccCCChhhccCCcccEeecC-CcccCchhhccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccc
Confidence 999988543 3568899999999997 444 3577899999999999999864 3588999999999999999862
Q ss_pred CCCCccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecC
Q 041467 169 TANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTI 248 (746)
Q Consensus 169 ~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 248 (746)
.+ ++.+++|+.|++++|++++ + ..+..++ +|+.|++++|++++..| +..+++|++|++++|++.+..
T Consensus 215 ------~~--~~~l~~L~~L~l~~n~l~~-~-~~l~~l~-~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~ 281 (466)
T 1o6v_A 215 ------TP--LGILTNLDELSLNGNQLKD-I-GTLASLT-NLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNIS 281 (466)
T ss_dssp ------GG--GGGCTTCCEEECCSSCCCC-C-GGGGGCT-TCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCG
T ss_pred ------cc--ccccCCCCEEECCCCCccc-c-hhhhcCC-CCCEEECCCCccccchh--hhcCCCCCEEECCCCccCccc
Confidence 12 6778999999999999985 3 3677787 79999999999997554 899999999999999998754
Q ss_pred CcCCCCCCCCceeeccccccccccc-ccccccChHHhhhccCCCCCCccccCCCCCCeeeecCCcCccccchhhhhcccc
Q 041467 249 PPLIGETPNLQLLNIGGNHLQGSIL-SSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTL 327 (746)
Q Consensus 249 p~~~~~l~~L~~L~Ls~N~l~~~~~-~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l 327 (746)
| +..+++|+.|++++|++++..+ ..+.+|+.+++.+|++.+..| +..+++|+.|++++|++++. ..+..+++|
T Consensus 282 ~--~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L 355 (466)
T 1o6v_A 282 P--LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNI 355 (466)
T ss_dssp G--GTTCTTCSEEECCSSCCSCCGGGGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTC
T ss_pred c--ccCCCccCeEEcCCCcccCchhhcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhccCCCC
Confidence 4 8899999999999999997654 445667777777999998766 78999999999999999964 468899999
Q ss_pred cceEEccCccccccCchhhhcccCCceeecCCCCCCCCCCCEEEccCCcCccc
Q 041467 328 SLYLELDNNLLNGSLPPEVGNLKNLLRLHIPEYPENLSFFELLNLSYNYFGSE 380 (746)
Q Consensus 328 ~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~lp~~~~~l~~L~~L~ls~N~l~~~ 380 (746)
+.|++++|++++..| +. .++.|+.|++++|.+++.
T Consensus 356 -~~L~l~~n~l~~~~~--~~---------------~l~~L~~L~l~~n~~~~~ 390 (466)
T 1o6v_A 356 -NWLSAGHNQISDLTP--LA---------------NLTRITQLGLNDQAWTNA 390 (466)
T ss_dssp -CEEECCSSCCCBCGG--GT---------------TCTTCCEEECCCEEEECC
T ss_pred -CEEeCCCCccCccch--hh---------------cCCCCCEEeccCCcccCC
Confidence 689999999997665 33 456778999999999884
No 55
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=4.4e-35 Score=311.39 Aligned_cols=214 Identities=21% Similarity=0.193 Sum_probs=171.4
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccch
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
.++|+..+.||+|+||.||+ ||||++.... ....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv 83 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV 83 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEE
Confidence 46789999999999999996 8999986542 33456789999999999999999999999999999999
Q ss_pred hhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCC
Q 041467 547 FKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 547 ~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~ 621 (746)
|||+++|+|. ...+++.++..++.||+.||+|||++ +|+||||||+|||++.+|.+||+|||+|+......
T Consensus 84 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~- 159 (337)
T 1o6l_A 84 MEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG- 159 (337)
T ss_dssp EECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT-
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhcccCC-
Confidence 9999999985 45789999999999999999999999 99999999999999999999999999998642211
Q ss_pred CCCcccccccccccccccccccccccccccccCCCccceeeccceeecccccc-----------ccchhhcc----ccCC
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEKKQ-----------NKSILKSA----GIKG 686 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~~~-----------~~~i~~~~----~~~~ 686 (746)
......+||+.|+|||++.+..++.+ +||||+||++|...... ...+.... ...+
T Consensus 160 -------~~~~~~~gt~~y~aPE~~~~~~~~~~---~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s 229 (337)
T 1o6l_A 160 -------ATMKTFCGTPEYLAPEVLEDNDYGRA---VDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLS 229 (337)
T ss_dssp -------CCBCCCEECGGGCCGGGGSSSCBCTT---HHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTSC
T ss_pred -------CcccccccChhhCChhhhcCCCCCch---hhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCC
Confidence 12334789999999999988877554 99999999998211110 11111111 1123
Q ss_pred CccHHHHHHhhCCCCCCCCC
Q 041467 687 KKTVSFFLSLLSPSCSVFPL 706 (746)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~p~ 706 (746)
.+....+..|+..++..||.
T Consensus 230 ~~~~~li~~lL~~dP~~R~g 249 (337)
T 1o6l_A 230 PEAKSLLAGLLKKDPKQRLG 249 (337)
T ss_dssp HHHHHHHHHHTCSSTTTSTT
T ss_pred HHHHHHHHHHhhcCHHHhcC
Confidence 45566777888877777763
No 56
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=3.9e-35 Score=316.46 Aligned_cols=178 Identities=22% Similarity=0.311 Sum_probs=154.9
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccch
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
.++|+..+.||+|+||.||+ ||||++.... ....+.+.+|+++++.++|||||+++++|.+.+..++|
T Consensus 14 ~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv 93 (384)
T 4fr4_A 14 FDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMV 93 (384)
T ss_dssp GGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 46799999999999999996 8999886443 33456789999999999999999999999999999999
Q ss_pred hhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCC
Q 041467 547 FKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 547 ~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~ 621 (746)
|||+.+|+|. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.+|.+||+|||+|+.+...
T Consensus 94 ~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~-- 168 (384)
T 4fr4_A 94 VDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRE-- 168 (384)
T ss_dssp ECCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCTT--
T ss_pred EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeeccCC--
Confidence 9999999986 45789999999999999999999999 9999999999999999999999999999876321
Q ss_pred CCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......+||+.|+|||++.+.....++.++||||+||++|
T Consensus 169 -------~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~ 208 (384)
T 4fr4_A 169 -------TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAY 208 (384)
T ss_dssp -------CCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHH
T ss_pred -------CceeccCCCccccCCeeeccCCCCCCCccceeechHHHHH
Confidence 2234578999999999998644333455699999999999
No 57
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=3.5e-35 Score=307.36 Aligned_cols=177 Identities=20% Similarity=0.293 Sum_probs=157.2
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhh
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFK 548 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e 548 (746)
..++|+..+.||+|+||.||+ ||||++........+.+.+|+.++++++|||||++++++...+..++|||
T Consensus 18 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 97 (297)
T 3fxz_A 18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME 97 (297)
T ss_dssp GGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEE
Confidence 456899999999999999997 89999876665566779999999999999999999999999999999999
Q ss_pred hccCCccc----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCC
Q 041467 549 AISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTT 624 (746)
Q Consensus 549 ~~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~ 624 (746)
|+++|+|. ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+|+.......
T Consensus 98 ~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--- 171 (297)
T 3fxz_A 98 YLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS--- 171 (297)
T ss_dssp CCTTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC---
T ss_pred CCCCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecCCccc---
Confidence 99999986 45689999999999999999999999 999999999999999999999999999987643221
Q ss_pred cccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 625 AETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 625 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.....+||+.|+|||++.+..++. ++||||+||++|
T Consensus 172 -----~~~~~~gt~~y~aPE~~~~~~~~~---~~DiwslG~il~ 207 (297)
T 3fxz_A 172 -----KRSTMVGTPYWMAPEVVTRKAYGP---KVDIWSLGIMAI 207 (297)
T ss_dssp -----CBCCCCSCGGGCCHHHHHCSCBCT---HHHHHHHHHHHH
T ss_pred -----ccCCccCCcCccChhhhcCCCCCc---HHHHHHHHHHHH
Confidence 123467999999999998887755 499999999998
No 58
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=6.1e-36 Score=318.93 Aligned_cols=181 Identities=22% Similarity=0.294 Sum_probs=147.7
Q ss_pred hhhhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccc
Q 041467 476 SKATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 476 ~~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~l 545 (746)
....++|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++|||||++++++...+..++
T Consensus 6 ~~l~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~l 85 (347)
T 3zgw_A 6 DELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFM 85 (347)
T ss_dssp TTTTTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred HHHhcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEE
Confidence 34567899999999999999996 9999986443 2334578999999999999999999999999999999
Q ss_pred hhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCC
Q 041467 546 DFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620 (746)
Q Consensus 546 v~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~ 620 (746)
||||+++|++. ...+++.++..++.||+.|++|||+. +|+||||||+||++++++.+||+|||+|.......
T Consensus 86 v~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~ 162 (347)
T 3zgw_A 86 VLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNK 162 (347)
T ss_dssp EEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC-----
T ss_pred EEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccCcccccCCC
Confidence 99999999985 46799999999999999999999999 99999999999999999999999999987653221
Q ss_pred CCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 621 PGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 621 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
. ......+||+.|+|||++.+..+. +.++||||+||++|
T Consensus 163 ~-------~~~~~~~gt~~y~aPE~~~~~~~~--~~~~DiwSlG~il~ 201 (347)
T 3zgw_A 163 D-------YHLQTCCGSLAYAAPELIQGKSYL--GSEADVWSMGILLY 201 (347)
T ss_dssp ----------------CGGGCCHHHHTTC-----CCHHHHHHHHHHHH
T ss_pred C-------ccccccCCccCccCHHHHcCCCCC--CcHhHHHHHHHHHH
Confidence 1 122346899999999999887652 33699999999998
No 59
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.6e-35 Score=312.02 Aligned_cols=184 Identities=24% Similarity=0.373 Sum_probs=154.9
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhh
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKA 549 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~ 549 (746)
.++|+..+.||+|+||.||+ ||+|++........+.+.+|++++++++|||||++++++.+.+..++||||
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 88 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY 88 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence 46788899999999999997 899988655556677899999999999999999999999999999999999
Q ss_pred ccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCC
Q 041467 550 ISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623 (746)
Q Consensus 550 ~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~ 623 (746)
+++|+|. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.........
T Consensus 89 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 165 (310)
T 3s95_A 89 IKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQP 165 (310)
T ss_dssp CTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC------
T ss_pred cCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceecccccccc
Confidence 9999986 45789999999999999999999999 99999999999999999999999999998764332211
Q ss_pred C------cccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 624 T------AETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 624 ~------~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
. ..........+||+.|+|||++.+..++. ++|||||||++|
T Consensus 166 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~~Di~slG~~l~ 213 (310)
T 3s95_A 166 EGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDE---KVDVFSFGIVLC 213 (310)
T ss_dssp --------------CCCCSCGGGCCHHHHTTCCCCT---HHHHHHHHHHHH
T ss_pred cccccccccccccccccCCCcceeCHHHhcCCCCCc---HHHHHHHHHHHH
Confidence 0 00111122468999999999998877755 499999999998
No 60
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=1.8e-35 Score=316.39 Aligned_cols=215 Identities=19% Similarity=0.176 Sum_probs=166.0
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhh---hhhhhHHHHHHHHHhhcC-CCCceeeEEEEEecCCccc
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLK---QKEASRSFAAEFNALRNI-RHRNLIKIITICSSIDFEG 544 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~---~~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~~~~~~ 544 (746)
..++|+..+.||+|+||.||+ ||||++... .....+.+.+|+++++.+ +|||||++++++.+.+..|
T Consensus 21 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 100 (353)
T 3txo_A 21 GIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLF 100 (353)
T ss_dssp --CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEE
T ss_pred chhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEE
Confidence 357899999999999999996 899998754 233456788999999998 6999999999999999999
Q ss_pred chhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCC
Q 041467 545 FDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGY 619 (746)
Q Consensus 545 lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~ 619 (746)
+||||+++|+|. ...+++.++..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.....
T Consensus 101 lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~ 177 (353)
T 3txo_A 101 FVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICN 177 (353)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC-
T ss_pred EEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccceeecccC
Confidence 999999999986 46799999999999999999999999 9999999999999999999999999999853221
Q ss_pred CCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-----------ccccchhhccc----c
Q 041467 620 EPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-----------KQNKSILKSAG----I 684 (746)
Q Consensus 620 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-----------~~~~~i~~~~~----~ 684 (746)
.......+||+.|||||++.+..++. ++||||+||++|.... +....+..... .
T Consensus 178 --------~~~~~~~~gt~~y~aPE~~~~~~~~~---~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~~ 246 (353)
T 3txo_A 178 --------GVTTATFCGTPDYIAPEILQEMLYGP---AVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPTW 246 (353)
T ss_dssp ----------------CCGGGCCHHHHHHHHCTT---HHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTT
T ss_pred --------CccccccCCCcCeEChhhcCCCCcCC---ccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCCC
Confidence 12234478999999999998877755 4999999999992111 11112222211 1
Q ss_pred CCCccHHHHHHhhCCCCCCCCC
Q 041467 685 KGKKTVSFFLSLLSPSCSVFPL 706 (746)
Q Consensus 685 ~~~~~~~~~~~~~~~~~~~~p~ 706 (746)
.+......+..|+..++..||.
T Consensus 247 ~~~~~~~li~~lL~~dP~~R~~ 268 (353)
T 3txo_A 247 LHEDATGILKSFMTKNPTMRLG 268 (353)
T ss_dssp SCHHHHHHHHHHTCSSGGGSTT
T ss_pred CCHHHHHHHHHHhhhCHHHccC
Confidence 2244556677777776665554
No 61
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=5.9e-35 Score=310.06 Aligned_cols=220 Identities=20% Similarity=0.234 Sum_probs=169.7
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccch
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
.++|...+.||+|+||.||+ ||||++.... ....+.+.+|+++++.++|||||++++++...+..++|
T Consensus 8 i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv 87 (336)
T 3h4j_B 8 IGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMV 87 (336)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 46899999999999999996 9999986442 23346799999999999999999999999999999999
Q ss_pred hhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCC
Q 041467 547 FKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 547 ~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~ 621 (746)
|||+ +|++. ...+++.++..++.|++.|++|||+. +|+||||||+||++++++.+||+|||+++.....
T Consensus 88 ~E~~-~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~-- 161 (336)
T 3h4j_B 88 IEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG-- 161 (336)
T ss_dssp ECCC-CEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTS--
T ss_pred EECC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceeccCC--
Confidence 9999 56664 46799999999999999999999999 9999999999999999999999999999865321
Q ss_pred CCCcccccccccccccccccccccccccccccCCCccceeeccceeecccccc-----------ccchhhccccCCCccH
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEKKQ-----------NKSILKSAGIKGKKTV 690 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~~~-----------~~~i~~~~~~~~~~~~ 690 (746)
......+||+.|+|||++.+..+. ++++||||+||++|...... ...+............
T Consensus 162 -------~~~~~~~gt~~y~aPE~~~~~~~~--~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~s 232 (336)
T 3h4j_B 162 -------NFLKTSCGSPNYAAPEVINGKLYA--GPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDFLS 232 (336)
T ss_dssp -------BTTCCCTTSTTTSCGGGSCCSGGG--CHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCCCSSCCCCCTTSC
T ss_pred -------cccccccCCcCcCCHHHHcCCCCC--CCccchhHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCCCCcccCC
Confidence 122346799999999999887663 33699999999998211110 1111111111122334
Q ss_pred HHHHHhhCCCCCCCCC-CCCccch
Q 041467 691 SFFLSLLSPSCSVFPL-TPSSNSF 713 (746)
Q Consensus 691 ~~~~~~~~~~~~~~p~-~p~~~~~ 713 (746)
+.+..++..+....|. ||+..++
T Consensus 233 ~~~~~li~~~L~~dP~~Rpt~~ei 256 (336)
T 3h4j_B 233 PGAQSLIRRMIVADPMQRITIQEI 256 (336)
T ss_dssp HHHHHHHHTTSCSSGGGSCCHHHH
T ss_pred HHHHHHHHHHcCCChhHCcCHHHH
Confidence 4555566666666666 7776643
No 62
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=1.7e-35 Score=311.42 Aligned_cols=234 Identities=22% Similarity=0.275 Sum_probs=170.1
Q ss_pred HHHhhhhcCCCCCCeEeecCCeeEEE-------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcc
Q 041467 473 AELSKATNNFSPANKIREGGFNIVYN-------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFE 543 (746)
Q Consensus 473 ~~~~~~~~~~~~~~~ig~g~~g~v~~-------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~ 543 (746)
.++....++|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++|||||++++++...+..
T Consensus 30 ~~~~i~~~~y~i~~~lG~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 109 (309)
T 3p86_A 30 DDMDIPWCDLNIKEKIGAGSFGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNL 109 (309)
T ss_dssp --CBCCGGGEEEEEEEEECSSEEEEEEEETTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCC
T ss_pred ccccCChhHceeeeEeecCCCeEEEEEEECCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCce
Confidence 34444567899999999999999997 8999986442 33456789999999999999999999999999999
Q ss_pred cchhhhccCCccc----c----cCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEEcCCCCCCeeeCCCCcEEEcccccc
Q 041467 544 GFDFKAISNGQLR----L----CNLSLTQRVNIAIDVAFAIEYLRHHCQPS--IVHGDLKPSNILLDQDVVTHVGDLGLA 613 (746)
Q Consensus 544 ~lv~e~~~~g~l~----~----~~l~~~~~~~i~~~i~~~l~yLH~~~~~~--ivHrDlkp~NILl~~~~~~ki~DfGla 613 (746)
++||||+++|+|. . ..+++.++..++.|++.||+|||+. + |+||||||+||+++.++.+||+|||++
T Consensus 110 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a 186 (309)
T 3p86_A 110 SIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDFGLS 186 (309)
T ss_dssp EEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCCC--
T ss_pred EEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCCCCC
Confidence 9999999999986 1 2389999999999999999999999 7 999999999999999999999999999
Q ss_pred ccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccccc-------ccchhh------
Q 041467 614 KFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEKKQ-------NKSILK------ 680 (746)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~~~-------~~~i~~------ 680 (746)
+...... .......||+.|+|||++.+..++.+ +||||+||++|...... ...+..
T Consensus 187 ~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~---~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~~ 255 (309)
T 3p86_A 187 RLKASTF--------LSSKSAAGTPEWMAPEVLRDEPSNEK---SDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKC 255 (309)
T ss_dssp -----------------------CCTTSCHHHHTTCCCCTT---HHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHSC
T ss_pred ccccccc--------cccccCCCCccccChhhhcCCCCCch---hhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcC
Confidence 7643211 12234679999999999998877554 99999999998211110 000000
Q ss_pred ccccCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhcccC
Q 041467 681 SAGIKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLRL 720 (746)
Q Consensus 681 ~~~~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~ 720 (746)
..........+.+..++..|+...|. ||+..++...++.+
T Consensus 256 ~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~ 296 (309)
T 3p86_A 256 KRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPL 296 (309)
T ss_dssp CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 01111233445555666666666666 88888776665543
No 63
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-34 Score=305.87 Aligned_cols=211 Identities=22% Similarity=0.244 Sum_probs=171.8
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccch
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
.++|+..+.||+|+||.||+ ||+|++.... ....+.+.+|+.+++.++|||||++++++.+.+..++|
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 84 (318)
T 1fot_A 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMI 84 (318)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEE
Confidence 46789999999999999996 8999986543 23456788999999999999999999999999999999
Q ss_pred hhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCC
Q 041467 547 FKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 547 ~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~ 621 (746)
|||+++|+|. ...+++..+..++.||+.||+|||++ +|+||||||+||+++.+|.+||+|||+|+....
T Consensus 85 ~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~--- 158 (318)
T 1fot_A 85 MDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPD--- 158 (318)
T ss_dssp ECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECSS---
T ss_pred EeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecCC---
Confidence 9999999986 45789999999999999999999999 999999999999999999999999999987532
Q ss_pred CCCcccccccccccccccccccccccccccccCCCccceeeccceeeccccc-----------cccchhhcc----ccCC
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEKK-----------QNKSILKSA----GIKG 686 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~~-----------~~~~i~~~~----~~~~ 686 (746)
.....+||+.|+|||++.+..++.+ +||||+||++|..... ....+.... ...+
T Consensus 159 --------~~~~~~gt~~y~aPE~~~~~~~~~~---~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~p~~~~ 227 (318)
T 1fot_A 159 --------VTYTLCGTPDYIAPEVVSTKPYNKS---IDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFFN 227 (318)
T ss_dssp --------CBCCCCSCTTTCCHHHHTTCCBCTT---HHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCCCCCTTSC
T ss_pred --------ccccccCCccccCHhHhcCCCCCcc---cchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCCC
Confidence 1224689999999999988877554 9999999999921111 111122211 1223
Q ss_pred CccHHHHHHhhCCCCCCCCC
Q 041467 687 KKTVSFFLSLLSPSCSVFPL 706 (746)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~p~ 706 (746)
.+..+.+..|+..++.+||.
T Consensus 228 ~~~~~li~~lL~~dp~~R~~ 247 (318)
T 1fot_A 228 EDVKDLLSRLITRDLSQRLG 247 (318)
T ss_dssp HHHHHHHHHHTCSCTTTCTT
T ss_pred HHHHHHHHHHhccCHHHcCC
Confidence 45667888888888887774
No 64
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=8.7e-35 Score=308.76 Aligned_cols=194 Identities=30% Similarity=0.499 Sum_probs=166.1
Q ss_pred ccCCcccHHHHhhhhcCCCCCCeEeecCCeeEEE--------EEeehhhhhhh-hhhHHHHHHHHHhhcCCCCceeeEEE
Q 041467 465 QQFPMISHAELSKATNNFSPANKIREGGFNIVYN--------VAMKVANLKQK-EASRSFAAEFNALRNIRHRNLIKIIT 535 (746)
Q Consensus 465 ~~~~~~~~~~~~~~~~~~~~~~~ig~g~~g~v~~--------vavK~~~~~~~-~~~~~~~~E~~~l~~l~HpnIv~l~~ 535 (746)
.+...++..++....++|+..+.||+|+||.||+ ||||++..... .....+.+|++++++++||||+++++
T Consensus 15 ~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~ 94 (326)
T 3uim_A 15 GQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRG 94 (326)
T ss_dssp CCCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCE
T ss_pred CccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEE
Confidence 3455678899999999999999999999999997 89999865432 23346899999999999999999999
Q ss_pred EEecCCcccchhhhccCCccc---------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEE
Q 041467 536 ICSSIDFEGFDFKAISNGQLR---------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTH 606 (746)
Q Consensus 536 ~~~~~~~~~lv~e~~~~g~l~---------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~k 606 (746)
++...+..++||||+++|++. ...+++..+..++.|++.||+|||+.+.++|+||||||+||+++.++.+|
T Consensus 95 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~k 174 (326)
T 3uim_A 95 FCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAV 174 (326)
T ss_dssp EECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEE
T ss_pred EEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEE
Confidence 999999999999999999985 22489999999999999999999999888999999999999999999999
Q ss_pred EccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 607 VGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 607 i~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
|+|||+++....... .......||+.|+|||++.+..++.+ +||||+||++|
T Consensus 175 l~Dfg~~~~~~~~~~-------~~~~~~~gt~~y~aPE~~~~~~~~~~---~Di~slG~il~ 226 (326)
T 3uim_A 175 VGDFGLAKLMDYKDT-------HVTTAVRGTIGHIAPEYLSTGKSSEK---TDVFGYGVMLL 226 (326)
T ss_dssp ECCCSSCEECCSSSS-------CEECCCCSCGGGCCHHHHHHSEECHH---HHHHHHHHHHH
T ss_pred eccCccccccCcccc-------cccccccCCcCccCHHHhccCCCCcc---ccchhHHHHHH
Confidence 999999987643221 12234569999999999988777554 99999999998
No 65
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=8e-35 Score=310.25 Aligned_cols=216 Identities=20% Similarity=0.213 Sum_probs=170.4
Q ss_pred hhhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcC-CCCceeeEEEEEecCCcc
Q 041467 477 KATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNI-RHRNLIKIITICSSIDFE 543 (746)
Q Consensus 477 ~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~~~~~ 543 (746)
...++|+..+.||+|+||.||+ ||||++.... ....+.+.+|.++++.+ +|||||++++++.+.+..
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~ 93 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENL 93 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEE
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEE
Confidence 3467899999999999999996 8999987543 33456688999999887 899999999999999999
Q ss_pred cchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccC
Q 041467 544 GFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618 (746)
Q Consensus 544 ~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~ 618 (746)
|+||||+++|+|. ...+++.++..++.||+.||+|||++ +|+||||||+||+++.+|.+||+|||+|+....
T Consensus 94 ~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 170 (345)
T 1xjd_A 94 FFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKENML 170 (345)
T ss_dssp EEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCC
T ss_pred EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhhhhccc
Confidence 9999999999986 45799999999999999999999999 999999999999999999999999999986422
Q ss_pred CCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccccc-----------ccchhhccc----
Q 041467 619 YEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEKKQ-----------NKSILKSAG---- 683 (746)
Q Consensus 619 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~~~-----------~~~i~~~~~---- 683 (746)
.. ......+||+.|+|||++.+..++. ++||||+||++|...... ...+....+
T Consensus 171 ~~--------~~~~~~~gt~~y~aPE~~~~~~~~~---~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~ 239 (345)
T 1xjd_A 171 GD--------AKTNTFCGTPDYIAPEILLGQKYNH---SVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPR 239 (345)
T ss_dssp TT--------CCBCCCCSCGGGCCHHHHTTCCBCT---HHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCT
T ss_pred CC--------CcccCCCCCcccCChhhhcCCCCCC---hhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhCCCCCCc
Confidence 11 1233578999999999999877654 599999999998211110 111111111
Q ss_pred cCCCccHHHHHHhhCCCCCCCCC
Q 041467 684 IKGKKTVSFFLSLLSPSCSVFPL 706 (746)
Q Consensus 684 ~~~~~~~~~~~~~~~~~~~~~p~ 706 (746)
..+.+....+..|+..++..||.
T Consensus 240 ~~s~~~~~li~~lL~~dp~~R~~ 262 (345)
T 1xjd_A 240 WLEKEAKDLLVKLFVREPEKRLG 262 (345)
T ss_dssp TSCHHHHHHHHHHSCSSGGGSBT
T ss_pred ccCHHHHHHHHHHhcCCHhHcCC
Confidence 12244556777777777776665
No 66
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=4.3e-33 Score=308.53 Aligned_cols=292 Identities=21% Similarity=0.207 Sum_probs=235.2
Q ss_pred ccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEccC
Q 041467 20 LRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDC 99 (746)
Q Consensus 20 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 99 (746)
++..-.......+..+..++++++|++|+|++|.+++ +| .|+.+++|++|+|++|.+.+. | ++.+++|++|++++
T Consensus 20 l~~~~~~~~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~ 94 (457)
T 3bz5_A 20 FASEVAAAFEMQATDTISEEQLATLTSLDCHNSSITD-MT-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDS 94 (457)
T ss_dssp HHHHHHHHTTCCTTSEEEHHHHTTCCEEECCSSCCCC-CT-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCS
T ss_pred HHHHHHHhcCcCcccccChhHcCCCCEEEccCCCccc-Ch-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcC
Confidence 3333444555666777789999999999999999996 46 799999999999999999774 4 89999999999998
Q ss_pred CCCc-CcccCCCCCCEEeccCCCccc--ccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCcccc
Q 041467 100 GGRI-DSLGHLKSLLLLSLAFNQFLS--LSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFI 176 (746)
Q Consensus 100 ~~~~-~~~~~l~~L~~L~Ls~N~l~~--l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 176 (746)
|... -.++++++|++|++++|++.. +.++++|+.|++++|++++. .++.+++|++|++++|...+ .+
T Consensus 95 N~l~~~~~~~l~~L~~L~L~~N~l~~l~~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~~~------~~- 164 (457)
T 3bz5_A 95 NKLTNLDVTPLTKLTYLNCDTNKLTKLDVSQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKIT------KL- 164 (457)
T ss_dssp SCCSCCCCTTCTTCCEEECCSSCCSCCCCTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECTTCSCCC------CC-
T ss_pred CCCceeecCCCCcCCEEECCCCcCCeecCCCCCcCCEEECCCCcccee---ccccCCcCCEEECCCCCccc------cc-
Confidence 6543 248899999999999999965 56889999999999999975 38899999999999996543 12
Q ss_pred ccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCC
Q 041467 177 NLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETP 256 (746)
Q Consensus 177 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 256 (746)
.+..+++|+.|++++|++++ +| +..++ .|+.|++++|++++. .++.+++|++|++++|++++ +| ++.++
T Consensus 165 -~~~~l~~L~~L~ls~n~l~~-l~--l~~l~-~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~~~l~ 233 (457)
T 3bz5_A 165 -DVTPQTQLTTLDCSFNKITE-LD--VSQNK-LLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--VTPLT 233 (457)
T ss_dssp -CCTTCTTCCEEECCSSCCCC-CC--CTTCT-TCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--CTTCT
T ss_pred -ccccCCcCCEEECCCCccce-ec--cccCC-CCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--ccccC
Confidence 36789999999999999996 55 77776 799999999999974 48999999999999999997 56 88999
Q ss_pred CCceeecccccccccccccccccChHH----------hhhccCCCCCCccccCCCCCCeeeecCCcCccccchh------
Q 041467 257 NLQLLNIGGNHLQGSILSSLGNLTLQT----------YLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQ------ 320 (746)
Q Consensus 257 ~L~~L~Ls~N~l~~~~~~~l~~l~~l~----------~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~------ 320 (746)
+|+.|++++|++++..+..+.+|+.+. +.+|.+.+.+| ++.+++|+.|++++|.+.+.+|..
T Consensus 234 ~L~~L~l~~N~l~~~~~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~~~~~L~~ 311 (457)
T 3bz5_A 234 QLTYFDCSVNPLTELDVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDCQAAGITE 311 (457)
T ss_dssp TCSEEECCSSCCSCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEECTTCCCSC
T ss_pred CCCEEEeeCCcCCCcCHHHCCCCCEEeccCCCCCEEECCCCccCCccc--ccccccCCEEECCCCcccceeccCCCcceE
Confidence 999999999999998777777665443 33455555555 466777888888888776666643
Q ss_pred --hhhcccccceEEccCccccc
Q 041467 321 --ILSVTTLSLYLELDNNLLNG 340 (746)
Q Consensus 321 --~~~l~~l~~~L~Ls~N~l~~ 340 (746)
+..++.+ +.|++++|++++
T Consensus 312 L~l~~~~~L-~~L~L~~N~l~~ 332 (457)
T 3bz5_A 312 LDLSQNPKL-VYLYLNNTELTE 332 (457)
T ss_dssp CCCTTCTTC-CEEECTTCCCSC
T ss_pred echhhcccC-CEEECCCCcccc
Confidence 2333455 467777777765
No 67
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=2.8e-33 Score=309.82 Aligned_cols=333 Identities=25% Similarity=0.283 Sum_probs=255.9
Q ss_pred CCCcccccCccccccccccEEecccCcCcccCchhhhCCccC-------------cEEecccCcCCccCCccccCCCCCC
Q 041467 3 SNNLLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISL-------------ERLILSNNSFSCAIPANLSSGSNLI 69 (746)
Q Consensus 3 ~n~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L-------------~~L~Ls~N~l~~~~p~~~~~l~~L~ 69 (746)
+|++..+ ++.+..+++|++|+|++|.+.|.+|.+++++.+| ++|++++|.+++ +|.. .++|+
T Consensus 20 ~n~l~~i-P~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-lp~~---~~~L~ 94 (454)
T 1jl5_A 20 SSNLTEM-PVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-LPEL---PPHLE 94 (454)
T ss_dssp ---------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-CCSC---CTTCS
T ss_pred cCchhhC-ChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-CCCC---cCCCC
Confidence 4555333 3445678999999999999999999999999875 999999999996 5653 37899
Q ss_pred eeeCcCCCCCCccchhhcCCCCCCEEEccCCCCcCcccCC-CCCCEEeccCCCccc---ccCCCCCcEeeCccCcccccC
Q 041467 70 KLSTDSNNLVRDILTEICSLFKLERLRIDCGGRIDSLGHL-KSLLLLSLAFNQFLS---LSNASSLEMIEFSRNQFSGGV 145 (746)
Q Consensus 70 ~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~l-~~L~~L~Ls~N~l~~---l~~l~~L~~L~Ls~N~l~~~~ 145 (746)
+|++++|.+.+ +|.. +++|+.|++++|... .+..+ ++|++|++++|++.. +.++++|++|++++|++++ +
T Consensus 95 ~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~-~l~~~~~~L~~L~L~~n~l~~lp~~~~l~~L~~L~l~~N~l~~-l 168 (454)
T 1jl5_A 95 SLVASCNSLTE-LPEL---PQSLKSLLVDNNNLK-ALSDLPPLLEYLGVSNNQLEKLPELQNSSFLKIIDVDNNSLKK-L 168 (454)
T ss_dssp EEECCSSCCSS-CCCC---CTTCCEEECCSSCCS-CCCSCCTTCCEEECCSSCCSSCCCCTTCTTCCEEECCSSCCSC-C
T ss_pred EEEccCCcCCc-cccc---cCCCcEEECCCCccC-cccCCCCCCCEEECcCCCCCCCcccCCCCCCCEEECCCCcCcc-c
Confidence 99999999977 6653 478999999887543 33334 699999999999854 5678899999999999996 4
Q ss_pred CccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCC
Q 041467 146 SVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIP 225 (746)
Q Consensus 146 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p 225 (746)
|.. .++|++|++++|.+++ +| .++++++|+.|++++|++++ +|... .+|+.|++++|+++ .+|
T Consensus 169 p~~---~~~L~~L~L~~n~l~~-------l~-~~~~l~~L~~L~l~~N~l~~-l~~~~----~~L~~L~l~~n~l~-~lp 231 (454)
T 1jl5_A 169 PDL---PPSLEFIAAGNNQLEE-------LP-ELQNLPFLTAIYADNNSLKK-LPDLP----LSLESIVAGNNILE-ELP 231 (454)
T ss_dssp CCC---CTTCCEEECCSSCCSS-------CC-CCTTCTTCCEEECCSSCCSS-CCCCC----TTCCEEECCSSCCS-SCC
T ss_pred CCC---cccccEEECcCCcCCc-------Cc-cccCCCCCCEEECCCCcCCc-CCCCc----CcccEEECcCCcCC-ccc
Confidence 543 3599999999999986 23 37899999999999999985 55432 37999999999998 677
Q ss_pred ccccCCCCCCeeecccccceecCCcCCCCCCCCceeecccccccccccccccccChHHhhhccCCCCCCccccCCCCCCe
Q 041467 226 HGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLG 305 (746)
Q Consensus 226 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~ 305 (746)
. |+.+++|++|++++|++.+ +|.. +++|+.|++++|++++ +|..+.+++.+++.+|.+++. |.. .++|+.
T Consensus 232 ~-~~~l~~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~~~~~~L~~L~ls~N~l~~l-~~~---~~~L~~ 301 (454)
T 1jl5_A 232 E-LQNLPFLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LPELPQSLTFLDVSENIFSGL-SEL---PPNLYY 301 (454)
T ss_dssp C-CTTCTTCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CCCCCTTCCEEECCSSCCSEE-SCC---CTTCCE
T ss_pred c-cCCCCCCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-cCcccCcCCEEECcCCccCcc-cCc---CCcCCE
Confidence 4 8999999999999999985 5553 4789999999999996 566678888888888988862 211 268999
Q ss_pred eeecCCcCccccchhhhhc-ccccceEEccCccccccCchhhhcccCCceeecCC-----CCCCCCCCCEEEccCCcCcc
Q 041467 306 LSVSHNKLTSTLPQQILSV-TTLSLYLELDNNLLNGSLPPEVGNLKNLLRLHIPE-----YPENLSFFELLNLSYNYFGS 379 (746)
Q Consensus 306 L~Ls~N~l~~~~p~~~~~l-~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~lp~-----~~~~l~~L~~L~ls~N~l~~ 379 (746)
|++++|++++ +|. + ..+ +.|++++|++++ +|.. +++|+.|++.. .+..++.|+.|++++|++++
T Consensus 302 L~l~~N~l~~-i~~----~~~~L-~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~~lp~~l~~L~~L~L~~N~l~~ 371 (454)
T 1jl5_A 302 LNASSNEIRS-LCD----LPPSL-EELNVSNNKLIE-LPAL---PPRLERLIASFNHLAEVPELPQNLKQLHVEYNPLRE 371 (454)
T ss_dssp EECCSSCCSE-ECC----CCTTC-CEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSS
T ss_pred EECcCCcCCc-ccC----CcCcC-CEEECCCCcccc-cccc---CCcCCEEECCCCccccccchhhhccEEECCCCCCCc
Confidence 9999999985 442 3 355 689999999985 7765 46777775421 12246789999999999999
Q ss_pred --cCCC
Q 041467 380 --EVPT 383 (746)
Q Consensus 380 --~~p~ 383 (746)
.+|.
T Consensus 372 l~~ip~ 377 (454)
T 1jl5_A 372 FPDIPE 377 (454)
T ss_dssp CCCCCT
T ss_pred CCCChH
Confidence 6664
No 68
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=2.2e-34 Score=304.75 Aligned_cols=187 Identities=21% Similarity=0.291 Sum_probs=160.6
Q ss_pred CcccHHHHhhhhcC----------CCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCC
Q 041467 468 PMISHAELSKATNN----------FSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHR 528 (746)
Q Consensus 468 ~~~~~~~~~~~~~~----------~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~Hp 528 (746)
+.++.+++..+++. |...+.||+|+||.||+ ||||++........+.+.+|+.++++++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence 45677777666643 66678999999999996 999998766555567799999999999999
Q ss_pred ceeeEEEEEecCCcccchhhhccCCccc----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCc
Q 041467 529 NLIKIITICSSIDFEGFDFKAISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVV 604 (746)
Q Consensus 529 nIv~l~~~~~~~~~~~lv~e~~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~ 604 (746)
|||++++++...+..++||||+++|++. ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.
T Consensus 103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~ 179 (321)
T 2c30_A 103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSILLTLDGR 179 (321)
T ss_dssp TBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCC
T ss_pred CcceEEEEEEECCEEEEEEecCCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCc
Confidence 9999999999999999999999999986 45789999999999999999999999 9999999999999999999
Q ss_pred EEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 605 THVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 605 ~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
+||+|||+++....... ......||+.|+|||++.+..++. ++||||+||++|
T Consensus 180 ~kl~Dfg~~~~~~~~~~--------~~~~~~gt~~y~aPE~~~~~~~~~---~~Dv~slG~il~ 232 (321)
T 2c30_A 180 VKLSDFGFCAQISKDVP--------KRKSLVGTPYWMAPEVISRSLYAT---EVDIWSLGIMVI 232 (321)
T ss_dssp EEECCCTTCEECCSSSC--------CBCCCCSCGGGCCHHHHTTCCBCT---HHHHHHHHHHHH
T ss_pred EEEeeeeeeeecccCcc--------ccccccCCccccCHhhhcCCCCCc---hhhHHHHHHHHH
Confidence 99999999987643221 123467999999999998877655 499999999998
No 69
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=7.8e-35 Score=323.17 Aligned_cols=176 Identities=19% Similarity=0.236 Sum_probs=146.5
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhh--hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCC-----
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLK--QKEASRSFAAEFNALRNIRHRNLIKIITICSSID----- 541 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~----- 541 (746)
..++|+..+.||+|+||.||+ ||||++... .....+++.+|+++++.++|||||++++++....
T Consensus 60 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 139 (464)
T 3ttj_A 60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEF 139 (464)
T ss_dssp EETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTC
T ss_pred ecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccC
Confidence 457899999999999999996 899998643 2344567899999999999999999999997654
Q ss_pred -cccchhhhccCCccc--ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccC
Q 041467 542 -FEGFDFKAISNGQLR--LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618 (746)
Q Consensus 542 -~~~lv~e~~~~g~l~--~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~ 618 (746)
..|+||||+.++.+. ...+++.++..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+|+....
T Consensus 140 ~~~~lv~E~~~~~l~~~~~~~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 216 (464)
T 3ttj_A 140 QDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 216 (464)
T ss_dssp CEEEEEEECCSEEHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCCC-----
T ss_pred CeEEEEEeCCCCCHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEeeeecCC
Confidence 459999999877544 45689999999999999999999999 999999999999999999999999999987532
Q ss_pred CCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 619 YEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 619 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
. ......+||++|+|||++.+..++. ++||||+||++|
T Consensus 217 ~---------~~~~~~~gt~~y~aPE~~~~~~~~~---~~DiwSlG~il~ 254 (464)
T 3ttj_A 217 S---------FMMTPYVVTRYYRAPEVILGMGYKE---NVDIWSVGCIMG 254 (464)
T ss_dssp C---------CCC----CCCTTCCHHHHTTCCCCT---THHHHHHHHHHH
T ss_pred C---------cccCCCcccccccCHHHHcCCCCCH---HHHHHHHHHHHH
Confidence 1 1234478999999999999887755 499999999998
No 70
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=1e-34 Score=314.32 Aligned_cols=177 Identities=20% Similarity=0.246 Sum_probs=152.8
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcC-CCCceeeEEEEEecCCccc
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNI-RHRNLIKIITICSSIDFEG 544 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~~~~~~ 544 (746)
..++|+..+.||+|+||.||+ ||||++.... ....+.+.+|..+++++ +|||||+++++|.+.+..+
T Consensus 50 ~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~ 129 (396)
T 4dc2_A 50 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLF 129 (396)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred ChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEE
Confidence 346799999999999999996 8999987542 23345688999999887 8999999999999999999
Q ss_pred chhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCC
Q 041467 545 FDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGY 619 (746)
Q Consensus 545 lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~ 619 (746)
+||||+++|+|. ...+++.++..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+|+.....
T Consensus 130 lV~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~ 206 (396)
T 4dc2_A 130 FVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRP 206 (396)
T ss_dssp EEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EEEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeeecccC
Confidence 999999999985 46799999999999999999999999 9999999999999999999999999999853211
Q ss_pred CCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 620 EPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 620 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.......+||+.|||||++.+..++. ++||||+||++|
T Consensus 207 --------~~~~~~~~gt~~Y~aPE~l~~~~~~~---~~DiwslGvlly 244 (396)
T 4dc2_A 207 --------GDTTSTFCGTPNYIAPEILRGEDYGF---SVDWWALGVLMF 244 (396)
T ss_dssp --------TCCBCCCCBCGGGCCHHHHTTCCBCT---HHHHHHHHHHHH
T ss_pred --------CCccccccCCcccCCchhhcCCCCCh---HHHHHHHHHHHH
Confidence 12234578999999999999887755 599999999998
No 71
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=9.7e-35 Score=316.42 Aligned_cols=187 Identities=21% Similarity=0.203 Sum_probs=157.1
Q ss_pred HHHHhhhhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEec
Q 041467 472 HAELSKATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSS 539 (746)
Q Consensus 472 ~~~~~~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~ 539 (746)
..+.....++|+..+.||+|+||.||+ ||||++.... ....+.+.+|+++++.++|||||+++++|.+
T Consensus 53 ~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 132 (412)
T 2vd5_A 53 LKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQD 132 (412)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEee
Confidence 345555678999999999999999997 8999986532 2334568899999999999999999999999
Q ss_pred CCcccchhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccccc
Q 041467 540 IDFEGFDFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLA 613 (746)
Q Consensus 540 ~~~~~lv~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla 613 (746)
.+..|+||||+++|+|. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++++||+|||+|
T Consensus 133 ~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~DFGla 209 (412)
T 2vd5_A 133 ENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLADFGSC 209 (412)
T ss_dssp SSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEeechhh
Confidence 99999999999999986 24799999999999999999999999 9999999999999999999999999999
Q ss_pred ccccCCCCCCCcccccccccccccccccccccccccc----cccCCCccceeeccceee
Q 041467 614 KFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARN----LENREKRHTVMSFPQRFA 668 (746)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~----~~~~~~~~DiwSlG~i~~ 668 (746)
+....... ......+||+.|||||++.... ...++.++||||+||++|
T Consensus 210 ~~~~~~~~-------~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvily 261 (412)
T 2vd5_A 210 LKLRADGT-------VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAY 261 (412)
T ss_dssp EECCTTSC-------EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHH
T ss_pred eeccCCCc-------cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHH
Confidence 87643211 1223468999999999998421 112345699999999999
No 72
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=1.2e-34 Score=307.01 Aligned_cols=187 Identities=30% Similarity=0.480 Sum_probs=160.5
Q ss_pred ccHHHHhhhhcCCCCCCeEeecCCeeEEE--------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCC
Q 041467 470 ISHAELSKATNNFSPANKIREGGFNIVYN--------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSID 541 (746)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~ig~g~~g~v~~--------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~ 541 (746)
++..++...+++|+..+.||+|+||.||+ ||||++........+.+.+|++++++++|||||++++++...+
T Consensus 29 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 108 (321)
T 2qkw_B 29 VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERN 108 (321)
T ss_dssp -CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTT
T ss_pred ecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC
Confidence 33455667889999999999999999997 8999887655556678999999999999999999999999999
Q ss_pred cccchhhhccCCccc---------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccc
Q 041467 542 FEGFDFKAISNGQLR---------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGL 612 (746)
Q Consensus 542 ~~~lv~e~~~~g~l~---------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGl 612 (746)
..++||||+++|+|. ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 109 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 185 (321)
T 2qkw_B 109 EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGI 185 (321)
T ss_dssp CCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCCTT
T ss_pred eEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeeccc
Confidence 999999999999986 12489999999999999999999999 999999999999999999999999999
Q ss_pred cccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 613 AKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 613 a~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
++........ .......||+.|+|||++.+..++. ++|||||||++|
T Consensus 186 ~~~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~---~~Di~slG~il~ 232 (321)
T 2qkw_B 186 SKKGTELDQT------HLSTVVKGTLGYIDPEYFIKGRLTE---KSDVYSFGVVLF 232 (321)
T ss_dssp CEECSSSSCC------CCBCCCEEETTTCCHHHHHHCBCCT---HHHHHHHHHHHH
T ss_pred cccccccccc------ccccccCCCccccCHHHhcCCCCCc---ccchHhHHHHHH
Confidence 9865332211 1123467999999999998877654 599999999998
No 73
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=1.8e-34 Score=308.61 Aligned_cols=215 Identities=20% Similarity=0.197 Sum_probs=170.3
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcC-CCCceeeEEEEEecCCccc
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNI-RHRNLIKIITICSSIDFEG 544 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~~~~~~ 544 (746)
..++|+..+.||+|+||.||+ ||||++.... ....+.+.+|.++++.+ +||||+++++++.+.+..|
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 356899999999999999996 8999987542 33456788999999988 7999999999999999999
Q ss_pred chhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCC
Q 041467 545 FDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGY 619 (746)
Q Consensus 545 lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~ 619 (746)
+||||+++|+|. ...+++.++..++.||+.||+|||+. +|+||||||+|||++.+|.+||+|||+|+.....
T Consensus 98 lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 174 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD 174 (353)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCcccccccC
Confidence 999999999986 35799999999999999999999999 9999999999999999999999999999864221
Q ss_pred CCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccccc-----------ccchhhccc----c
Q 041467 620 EPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEKKQ-----------NKSILKSAG----I 684 (746)
Q Consensus 620 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~~~-----------~~~i~~~~~----~ 684 (746)
. ......+||+.|+|||++.+..++. ++||||+||++|...... ...+..... .
T Consensus 175 ~--------~~~~~~~gt~~y~aPE~~~~~~~~~---~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~~ 243 (353)
T 2i0e_A 175 G--------VTTKTFCGTPDYIAPEIIAYQPYGK---SVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKS 243 (353)
T ss_dssp T--------CCBCCCCSCGGGCCHHHHTTCCBST---HHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTT
T ss_pred C--------cccccccCCccccChhhhcCCCcCC---cccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCCC
Confidence 1 1233478999999999998877754 599999999998211110 111222111 1
Q ss_pred CCCccHHHHHHhhCCCCCCCCC
Q 041467 685 KGKKTVSFFLSLLSPSCSVFPL 706 (746)
Q Consensus 685 ~~~~~~~~~~~~~~~~~~~~p~ 706 (746)
.+.+....+..|+..++..||.
T Consensus 244 ~s~~~~~li~~lL~~dP~~R~~ 265 (353)
T 2i0e_A 244 MSKEAVAICKGLMTKHPGKRLG 265 (353)
T ss_dssp SCHHHHHHHHHHTCSCTTSCTT
T ss_pred CCHHHHHHHHHHhhcCHHHcCC
Confidence 2245556777777777766664
No 74
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=6.7e-35 Score=309.26 Aligned_cols=232 Identities=20% Similarity=0.214 Sum_probs=176.5
Q ss_pred hcCCCCCCeEeecCCeeEEE------------EEeehhhhh-hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccc
Q 041467 479 TNNFSPANKIREGGFNIVYN------------VAMKVANLK-QKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~------------vavK~~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~l 545 (746)
.++|+..+.||+|+||.||+ ||||++... .....+.+.+|++++++++|||||++++++.+.+..++
T Consensus 48 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 127 (325)
T 3kul_A 48 ASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMI 127 (325)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEE
T ss_pred hhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEE
Confidence 35788899999999999995 899998654 23445679999999999999999999999999999999
Q ss_pred hhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCC
Q 041467 546 DFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGY 619 (746)
Q Consensus 546 v~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~ 619 (746)
||||+++|+|. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 128 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 204 (325)
T 3kul_A 128 VTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDD 204 (325)
T ss_dssp EEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCEECC--
T ss_pred EeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCcccccccC
Confidence 99999999986 34789999999999999999999999 9999999999999999999999999999876433
Q ss_pred CCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc--ccc----------cchhhc-cccCC
Q 041467 620 EPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK--KQN----------KSILKS-AGIKG 686 (746)
Q Consensus 620 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~--~~~----------~~i~~~-~~~~~ 686 (746)
... ........||+.|+|||++.+..++.+ +|||||||++|.... ... ..+... .....
T Consensus 205 ~~~-----~~~~~~~~~t~~y~aPE~~~~~~~~~~---~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 276 (325)
T 3kul_A 205 PDA-----AYTTTGGKIPIRWTAPEAIAFRTFSSA---SDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAP 276 (325)
T ss_dssp --C-----CEECC---CCGGGSCHHHHHHCEECHH---HHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCCCCC
T ss_pred ccc-----eeeccCCCCcccccCHhHhcCCCCCcH---HHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCCCCCC
Confidence 221 112233456889999999988777655 999999999983221 110 011111 11122
Q ss_pred CccHHHHHHhhCCCCCCCCC-CCCccchhhhcccCC
Q 041467 687 KKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLRLP 721 (746)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~~ 721 (746)
....+.+..++..|+...|. ||++.++...++.+.
T Consensus 277 ~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~ 312 (325)
T 3kul_A 277 MGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALI 312 (325)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 33445555666666666666 888888777666543
No 75
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=1.9e-34 Score=316.30 Aligned_cols=187 Identities=20% Similarity=0.187 Sum_probs=156.5
Q ss_pred HHHHhhhhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEec
Q 041467 472 HAELSKATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSS 539 (746)
Q Consensus 472 ~~~~~~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~ 539 (746)
..++....++|+..+.||+|+||+||+ ||||++.... ....+.+.+|+.+++.++|||||+++++|.+
T Consensus 66 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~ 145 (437)
T 4aw2_A 66 VKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQD 145 (437)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC
T ss_pred hhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee
Confidence 344556678999999999999999997 8999986532 2223458899999999999999999999999
Q ss_pred CCcccchhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccccc
Q 041467 540 IDFEGFDFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLA 613 (746)
Q Consensus 540 ~~~~~lv~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla 613 (746)
.+..++|||||++|+|. ...+++..+..++.||+.||+|||+. +||||||||+|||++.++.+||+|||+|
T Consensus 146 ~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~DFGla 222 (437)
T 4aw2_A 146 DNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSC 222 (437)
T ss_dssp SSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcchhhh
Confidence 99999999999999986 35789999999999999999999999 9999999999999999999999999999
Q ss_pred ccccCCCCCCCcccccccccccccccccccccccccc--cccCCCccceeeccceee
Q 041467 614 KFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARN--LENREKRHTVMSFPQRFA 668 (746)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~--~~~~~~~~DiwSlG~i~~ 668 (746)
+....... ......+||+.|||||++.... ...++.++||||+||++|
T Consensus 223 ~~~~~~~~-------~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~ 272 (437)
T 4aw2_A 223 LKLMEDGT-------VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMY 272 (437)
T ss_dssp EECCTTSC-------EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHH
T ss_pred hhcccCCC-------cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHH
Confidence 87543221 1223468999999999997311 112345699999999998
No 76
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=7.3e-32 Score=288.85 Aligned_cols=300 Identities=23% Similarity=0.337 Sum_probs=236.6
Q ss_pred cccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCE
Q 041467 15 ILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLER 94 (746)
Q Consensus 15 ~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 94 (746)
..+++|++|++++|.+. .+|. +..+++|++|+|++|++++ +|. |.++++|++|++++|.+.. + +.+..+++|++
T Consensus 41 ~~l~~L~~L~l~~~~i~-~~~~-~~~~~~L~~L~l~~n~i~~-~~~-~~~l~~L~~L~L~~n~i~~-~-~~~~~l~~L~~ 114 (347)
T 4fmz_A 41 EELESITKLVVAGEKVA-SIQG-IEYLTNLEYLNLNGNQITD-ISP-LSNLVKLTNLYIGTNKITD-I-SALQNLTNLRE 114 (347)
T ss_dssp HHHTTCSEEECCSSCCC-CCTT-GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCSE
T ss_pred hhcccccEEEEeCCccc-cchh-hhhcCCccEEEccCCcccc-chh-hhcCCcCCEEEccCCcccC-c-hHHcCCCcCCE
Confidence 35688999999999997 4554 8899999999999999985 454 9999999999999998865 3 46888999999
Q ss_pred EEccCCCCc--CcccCCCCCCEEeccCCCc----ccccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCC
Q 041467 95 LRIDCGGRI--DSLGHLKSLLLLSLAFNQF----LSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSG 168 (746)
Q Consensus 95 L~l~~~~~~--~~~~~l~~L~~L~Ls~N~l----~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 168 (746)
|+++++... ..+..+++|+.|++++|.. ..+..+++|++|++++|.+.+..+ +..+++|+.|++++|.+.+
T Consensus 115 L~l~~n~i~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~- 191 (347)
T 4fmz_A 115 LYLNEDNISDISPLANLTKMYSLNLGANHNLSDLSPLSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIED- 191 (347)
T ss_dssp EECTTSCCCCCGGGTTCTTCCEEECTTCTTCCCCGGGTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCC-
T ss_pred EECcCCcccCchhhccCCceeEEECCCCCCcccccchhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCcccc-
Confidence 999876543 3477888899999988854 346778888899998888876544 7788889999998888875
Q ss_pred CCCCccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecC
Q 041467 169 TANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTI 248 (746)
Q Consensus 169 ~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 248 (746)
++. +..+++|+.|++++|.+++..+ +..++ +|+.|++++|++++..+ +..+++|++|++++|.+.+.
T Consensus 192 ------~~~-~~~l~~L~~L~l~~n~l~~~~~--~~~~~-~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~- 258 (347)
T 4fmz_A 192 ------ISP-LASLTSLHYFTAYVNQITDITP--VANMT-RLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI- 258 (347)
T ss_dssp ------CGG-GGGCTTCCEEECCSSCCCCCGG--GGGCT-TCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC-
T ss_pred ------ccc-ccCCCccceeecccCCCCCCch--hhcCC-cCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC-
Confidence 222 6778888888988888875433 66666 68888888888886433 88888888888888888753
Q ss_pred CcCCCCCCCCceeecccccccccccccccccChHHhhhccCCCCCCccccCCCCCCeeeecCCcCccccchhhhhccccc
Q 041467 249 PPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLS 328 (746)
Q Consensus 249 p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~ 328 (746)
+.+..+++|++|++++|.+++ + +.+..+++|+.|++++|++++..|..+..++++
T Consensus 259 -~~~~~l~~L~~L~l~~n~l~~----------------------~-~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L- 313 (347)
T 4fmz_A 259 -NAVKDLTKLKMLNVGSNQISD----------------------I-SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNL- 313 (347)
T ss_dssp -GGGTTCTTCCEEECCSSCCCC----------------------C-GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTC-
T ss_pred -hhHhcCCCcCEEEccCCccCC----------------------C-hhhcCCCCCCEEECcCCcCCCcChhHhhccccC-
Confidence 467888888888888888763 1 246778899999999999998888888999998
Q ss_pred ceEEccCccccccCchhhhcccCCceeecCCCCCCCCCCCEEEccCCcCc
Q 041467 329 LYLELDNNLLNGSLPPEVGNLKNLLRLHIPEYPENLSFFELLNLSYNYFG 378 (746)
Q Consensus 329 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~lp~~~~~l~~L~~L~ls~N~l~ 378 (746)
+.|++++|++++..| +. .++.|+.|++++|.|+
T Consensus 314 ~~L~L~~n~l~~~~~--~~---------------~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 314 TTLFLSQNHITDIRP--LA---------------SLSKMDSADFANQVIK 346 (347)
T ss_dssp SEEECCSSSCCCCGG--GG---------------GCTTCSEESSSCC---
T ss_pred CEEEccCCccccccC--hh---------------hhhccceeehhhhccc
Confidence 689999999986444 33 4556788888888875
No 77
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=2.1e-34 Score=308.02 Aligned_cols=211 Identities=19% Similarity=0.207 Sum_probs=170.1
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccch
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
.++|+..+.||+|+||.||+ ||||++.... ....+.+.+|+++++.++|||||++++++.+.+..++|
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 119 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEE
Confidence 46899999999999999996 8999986543 23456789999999999999999999999999999999
Q ss_pred hhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCC
Q 041467 547 FKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 547 ~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~ 621 (746)
|||+++|+|. ...+++.++..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+|+.....
T Consensus 120 ~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~-- 194 (350)
T 1rdq_E 120 MEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-- 194 (350)
T ss_dssp EECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECSSC--
T ss_pred EcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceeccCC--
Confidence 9999999986 45789999999999999999999999 9999999999999999999999999999875321
Q ss_pred CCCcccccccccccccccccccccccccccccCCCccceeeccceeecccccc-----------ccchhhcc----ccCC
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEKKQ-----------NKSILKSA----GIKG 686 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~~~-----------~~~i~~~~----~~~~ 686 (746)
....+||+.|+|||++.+..++. ++||||+||++|...... ...+.... ...+
T Consensus 195 ---------~~~~~gt~~y~aPE~~~~~~~~~---~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~~~ 262 (350)
T 1rdq_E 195 ---------TWTLCGTPEALAPEIILSKGYNK---AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFS 262 (350)
T ss_dssp ---------BCCCEECGGGCCHHHHTTCCBCT---HHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTTCC
T ss_pred ---------cccccCCccccCHHHhcCCCCCC---cCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCCCC
Confidence 22468999999999999877654 599999999998211110 11121111 1122
Q ss_pred CccHHHHHHhhCCCCCCCCC
Q 041467 687 KKTVSFFLSLLSPSCSVFPL 706 (746)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~p~ 706 (746)
......+..|+..++..||.
T Consensus 263 ~~~~~li~~lL~~dp~~R~~ 282 (350)
T 1rdq_E 263 SDLKDLLRNLLQVDLTKRFG 282 (350)
T ss_dssp HHHHHHHHHHSCSCTTTCTT
T ss_pred HHHHHHHHHHhhcCHHhccC
Confidence 45566777777777776664
No 78
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=1.7e-34 Score=311.66 Aligned_cols=230 Identities=19% Similarity=0.252 Sum_probs=175.7
Q ss_pred hhcCCCCCCeEeecCCeeEEE----------------EEeehhhhhh-hhhhHHHHHHHHHhhcC-CCCceeeEEEEEec
Q 041467 478 ATNNFSPANKIREGGFNIVYN----------------VAMKVANLKQ-KEASRSFAAEFNALRNI-RHRNLIKIITICSS 539 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~----------------vavK~~~~~~-~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~ 539 (746)
..++|+..+.||+|+||.||+ ||||++.... ....+.+.+|+++++++ +|||||+++++|..
T Consensus 79 ~~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 158 (370)
T 2psq_A 79 PRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 158 (370)
T ss_dssp CGGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECS
T ss_pred cHHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEcc
Confidence 346788999999999999994 8999886542 34456799999999999 89999999999999
Q ss_pred CCcccchhhhccCCccc-----c----------------cCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCee
Q 041467 540 IDFEGFDFKAISNGQLR-----L----------------CNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNIL 598 (746)
Q Consensus 540 ~~~~~lv~e~~~~g~l~-----~----------------~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NIL 598 (746)
.+..++||||+++|+|. . ..+++.++..++.||+.||+|||++ +|+||||||+|||
T Consensus 159 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIl 235 (370)
T 2psq_A 159 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVL 235 (370)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEE
T ss_pred CCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhEE
Confidence 99999999999999985 1 2478999999999999999999999 9999999999999
Q ss_pred eCCCCcEEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-cc---
Q 041467 599 LDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ--- 674 (746)
Q Consensus 599 l~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~--- 674 (746)
++.++.+||+|||+|+........ .......||+.|+|||++.+..++.+ +|||||||++|.... ..
T Consensus 236 l~~~~~~kl~DFG~a~~~~~~~~~------~~~~~~~~t~~y~aPE~~~~~~~~~~---~DvwslG~il~ellt~g~~p~ 306 (370)
T 2psq_A 236 VTENNVMKIADFGLARDINNIDYY------KKTTNGRLPVKWMAPEALFDRVYTHQ---SDVWSFGVLMWEIFTLGGSPY 306 (370)
T ss_dssp ECTTCCEEECCCSSCEETTCCCTT------CTTTTTTSCGGGCCHHHHHTCCCCHH---HHHHHHHHHHHHHHTTSCCSS
T ss_pred ECCCCCEEEccccCCcccCcccce------ecccCCCcccceECHhHhcCCCCCcH---HHHHHHHHHHHHHHcCCCCCC
Confidence 999999999999999876432211 11223567899999999988877655 999999999983221 10
Q ss_pred ----ccchhh---c--cccCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhccc
Q 041467 675 ----NKSILK---S--AGIKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLR 719 (746)
Q Consensus 675 ----~~~i~~---~--~~~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~ 719 (746)
...++. . .......+.+.+..++..|+...|. ||+..++...+++
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~ 361 (370)
T 2psq_A 307 PGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDR 361 (370)
T ss_dssp TTCCGGGHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 111111 1 1111223344555566666666666 7888876655544
No 79
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=2.5e-34 Score=301.08 Aligned_cols=179 Identities=25% Similarity=0.349 Sum_probs=147.8
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhhh--------------------------hhhHHHHHHHHHhh
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQK--------------------------EASRSFAAEFNALR 523 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~--------------------------~~~~~~~~E~~~l~ 523 (746)
.++|+..+.||+|+||.||+ ||||++..... ...+.+.+|+++++
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~ 91 (298)
T 2zv2_A 12 LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILK 91 (298)
T ss_dssp ETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHH
T ss_pred ecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHH
Confidence 46899999999999999997 89998854321 12346889999999
Q ss_pred cCCCCceeeEEEEEec--CCcccchhhhccCCccc----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCe
Q 041467 524 NIRHRNLIKIITICSS--IDFEGFDFKAISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNI 597 (746)
Q Consensus 524 ~l~HpnIv~l~~~~~~--~~~~~lv~e~~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NI 597 (746)
+++||||+++++++.+ .+..++||||+++|++. ...+++.++..++.|++.||+|||+. +|+||||||+||
T Consensus 92 ~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Ni 168 (298)
T 2zv2_A 92 KLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNL 168 (298)
T ss_dssp TCCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGE
T ss_pred hCCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHE
Confidence 9999999999999987 45789999999999886 45689999999999999999999999 999999999999
Q ss_pred eeCCCCcEEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 598 LLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 598 Ll~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
+++.++.+||+|||+++...... .......||+.|+|||++.+......+.++||||+||++|
T Consensus 169 l~~~~~~~kl~Dfg~~~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~ 231 (298)
T 2zv2_A 169 LVGEDGHIKIADFGVSNEFKGSD--------ALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLY 231 (298)
T ss_dssp EECTTSCEEECCCTTCEECSSSS--------CEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHH
T ss_pred EECCCCCEEEecCCCcccccccc--------ccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHH
Confidence 99999999999999998764321 1123467999999999998765322244699999999998
No 80
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=3.5e-33 Score=294.22 Aligned_cols=249 Identities=22% Similarity=0.295 Sum_probs=160.1
Q ss_pred ccccEEecccCcCcc--cCchhhhCCccCcEEeccc-CcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCE
Q 041467 18 TFLRYINLVNNGFNG--EIPHQIGRLISLERLILSN-NSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLER 94 (746)
Q Consensus 18 ~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 94 (746)
.+++.|+|++|.+++ .+|..|+++++|++|+|++ |.+.+.+|..|+++++|++|+|++|.+.+.+|..+.
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~------- 122 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLS------- 122 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGG-------
T ss_pred ceEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHh-------
Confidence 467788888888877 7777788888888888874 777777777777777777777777777655555433
Q ss_pred EEccCCCCcCcccCCCCCCEEeccCCCcccccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCcc
Q 041467 95 LRIDCGGRIDSLGHLKSLLLLSLAFNQFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELD 174 (746)
Q Consensus 95 L~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 174 (746)
++++|++|+|++|++++.+|..|..+++|++|+|++|.+++ .
T Consensus 123 --------------------------------~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~------~ 164 (313)
T 1ogq_A 123 --------------------------------QIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISG------A 164 (313)
T ss_dssp --------------------------------GCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEE------E
T ss_pred --------------------------------CCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcccC------c
Confidence 33445555566666666666667777777777777776654 3
Q ss_pred ccccccCCC-CCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCC
Q 041467 175 FINLLTNCS-KLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIG 253 (746)
Q Consensus 175 ~~~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 253 (746)
+|..+..++ +|+.|++++|++++.+|..+..+. |+.|++++|++++..|..|..+++|+.|+|++|++.+.+|. +.
T Consensus 165 ~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~--L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~ 241 (313)
T 1ogq_A 165 IPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN--LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VG 241 (313)
T ss_dssp CCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC--CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CC
T ss_pred CCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc--ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-cc
Confidence 455566665 666666666666666666666553 66666666666666666666666666666666666554444 55
Q ss_pred CCCCCceeecccccccccccccccccChHHhhhccCCCCCCccccCCCCCCeeeecCCcCccccchhhhhcccccceEEc
Q 041467 254 ETPNLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLEL 333 (746)
Q Consensus 254 ~l~~L~~L~Ls~N~l~~~~~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~L 333 (746)
.+++|++|+|++|++++ .+|..|..+++|+.|+|++|+++|.+|.. ..++.+ ..+++
T Consensus 242 ~l~~L~~L~Ls~N~l~~---------------------~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L-~~l~l 298 (313)
T 1ogq_A 242 LSKNLNGLDLRNNRIYG---------------------TLPQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRF-DVSAY 298 (313)
T ss_dssp CCTTCCEEECCSSCCEE---------------------CCCGGGGGCTTCCEEECCSSEEEEECCCS-TTGGGS-CGGGT
T ss_pred ccCCCCEEECcCCcccC---------------------cCChHHhcCcCCCEEECcCCcccccCCCC-cccccc-ChHHh
Confidence 55666666666655543 33444555556666666666666555554 555555 34566
Q ss_pred cCcc
Q 041467 334 DNNL 337 (746)
Q Consensus 334 s~N~ 337 (746)
++|+
T Consensus 299 ~~N~ 302 (313)
T 1ogq_A 299 ANNK 302 (313)
T ss_dssp CSSS
T ss_pred cCCC
Confidence 6665
No 81
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=3.2e-34 Score=306.11 Aligned_cols=176 Identities=20% Similarity=0.245 Sum_probs=153.4
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcC-CCCceeeEEEEEecCCcccc
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNI-RHRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~~~~~~l 545 (746)
.++|+..+.||+|+||.||+ ||||++.... ....+.+.+|+++++++ +|||||++++++.+.+..++
T Consensus 8 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 87 (345)
T 3a8x_A 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 87 (345)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEE
Confidence 46789999999999999996 8999987542 33456788999999988 89999999999999999999
Q ss_pred hhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCC
Q 041467 546 DFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620 (746)
Q Consensus 546 v~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~ 620 (746)
||||+++|+|. ...+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+|+......
T Consensus 88 v~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~ 164 (345)
T 3a8x_A 88 VIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG 164 (345)
T ss_dssp EECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTT
T ss_pred EEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEeccccccccCCC
Confidence 99999999986 45799999999999999999999999 99999999999999999999999999998642211
Q ss_pred CCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 621 PGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 621 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......+||+.|+|||++.+..++. ++||||+||++|
T Consensus 165 --------~~~~~~~gt~~y~aPE~~~~~~~~~---~~DiwslG~il~ 201 (345)
T 3a8x_A 165 --------DTTSTFCGTPNYIAPEILRGEDYGF---SVDWWALGVLMF 201 (345)
T ss_dssp --------CCBCCCCSCGGGCCHHHHTTCCBCT---HHHHHHHHHHHH
T ss_pred --------CcccccCCCccccCccccCCCCCCh---HHhHHHHHHHHH
Confidence 1233478999999999999877654 599999999999
No 82
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=3.1e-34 Score=301.60 Aligned_cols=232 Identities=20% Similarity=0.246 Sum_probs=169.0
Q ss_pred hhcCCCCCCeEeecCCeeEEE------EEeehhhhh--hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhh
Q 041467 478 ATNNFSPANKIREGGFNIVYN------VAMKVANLK--QKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKA 549 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~------vavK~~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~ 549 (746)
..++|...+.||+|+||.||+ ||+|+++.. .....+.+.+|++++++++||||+++++++. .+..++||||
T Consensus 34 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e~ 112 (307)
T 3lb7_A 34 EASEVMLSTRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQW 112 (307)
T ss_dssp CTTSCCEEEEEEECSSCEEEEEESSSEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEEC
T ss_pred cccceEEEeEecCCCCeEEEEEEECCEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEec
Confidence 346789999999999999997 788887643 2344567999999999999999999999875 4568899999
Q ss_pred ccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCC
Q 041467 550 ISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623 (746)
Q Consensus 550 ~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~ 623 (746)
+.+|++. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+|+.......
T Consensus 113 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~-- 187 (307)
T 3lb7_A 113 CEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSG-- 187 (307)
T ss_dssp CSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSSCC--------
T ss_pred CCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCceecccccc--
Confidence 9999985 45789999999999999999999999 999999999999999999999999999986532211
Q ss_pred CcccccccccccccccccccccccccccccCCCccceeeccceeecccccc-----------ccchhhcc-ccC-----C
Q 041467 624 TAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEKKQ-----------NKSILKSA-GIK-----G 686 (746)
Q Consensus 624 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~~~-----------~~~i~~~~-~~~-----~ 686 (746)
........||+.|+|||++.......++.++|||||||++|...... ...+.... ..+ .
T Consensus 188 ----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (307)
T 3lb7_A 188 ----SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLY 263 (307)
T ss_dssp ----------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTCCCCCSTTSC
T ss_pred ----cccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHHHHHHHhcCCCCcchhhhh
Confidence 11223467999999999997443333455699999999998211110 00011100 011 1
Q ss_pred CccHHHHHHhhCCCCCCCCC-CCCccchhhhccc
Q 041467 687 KKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLR 719 (746)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~ 719 (746)
..+.+.+..++..|+...|+ ||+..++...++.
T Consensus 264 ~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~ 297 (307)
T 3lb7_A 264 KNCPKAMKRLVADCVKKVKEERPLFPQILSSIEL 297 (307)
T ss_dssp SSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHH
T ss_pred cCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHH
Confidence 23345556666666666666 8888766654443
No 83
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=2e-34 Score=301.18 Aligned_cols=177 Identities=24% Similarity=0.347 Sum_probs=149.1
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhh---hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccch
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLK---QKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
.++|+..+.||+|+||.||+ ||+|++... .....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 89 (294)
T 4eqm_A 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLV 89 (294)
T ss_dssp ETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEE
T ss_pred hccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEE
Confidence 45799999999999999996 899987532 234456799999999999999999999999999999999
Q ss_pred hhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCC
Q 041467 547 FKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 547 ~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~ 621 (746)
|||+++|+|. ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 90 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 166 (294)
T 4eqm_A 90 MEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSL 166 (294)
T ss_dssp EECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC-----
T ss_pred EeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCccccccccc
Confidence 9999999986 45689999999999999999999999 999999999999999999999999999987633211
Q ss_pred CCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.......||+.|+|||++.+..++.+ +||||+||++|
T Consensus 167 -------~~~~~~~gt~~y~aPE~~~~~~~~~~---~Di~slG~~l~ 203 (294)
T 4eqm_A 167 -------TQTNHVLGTVQYFSPEQAKGEATDEC---TDIYSIGIVLY 203 (294)
T ss_dssp ---------------CCSSCCHHHHHTCCCCTT---HHHHHHHHHHH
T ss_pred -------cccCccccCccccCHhHhcCCCCCch---HhHHHHHHHHH
Confidence 11233679999999999988877554 99999999998
No 84
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.4e-34 Score=304.26 Aligned_cols=174 Identities=21% Similarity=0.238 Sum_probs=151.8
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhh
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKA 549 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~ 549 (746)
.++|+..+.||+|+||.||+ ||+|++.... .....+.+|+++++.++|||||++++++.+.+..++||||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 82 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence 46899999999999999997 8999886432 3345688999999999999999999999999999999999
Q ss_pred ccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCC--CCcEEEccccccccccCCCC
Q 041467 550 ISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQ--DVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 550 ~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~--~~~~ki~DfGla~~~~~~~~ 621 (746)
+++|++. ...+++.++..++.|++.|++|||+. +|+||||||+||+++. ++.+||+|||+++.....
T Consensus 83 ~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~-- 157 (321)
T 1tki_A 83 ISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPG-- 157 (321)
T ss_dssp CCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTT--
T ss_pred CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCC--
Confidence 9999985 23689999999999999999999999 9999999999999986 789999999999876321
Q ss_pred CCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.......||+.|+|||++.+..++. ++||||+||++|
T Consensus 158 -------~~~~~~~gt~~y~aPE~~~~~~~~~---~~DiwslG~il~ 194 (321)
T 1tki_A 158 -------DNFRLLFTAPEYYAPEVHQHDVVST---ATDMWSLGTLVY 194 (321)
T ss_dssp -------CEEEEEESCGGGSCHHHHTTCEECH---HHHHHHHHHHHH
T ss_pred -------CccccccCChhhcCcHHhcCCCCCc---hhhHHHHHHHHH
Confidence 1223467999999999998876655 499999999998
No 85
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=1.5e-34 Score=314.71 Aligned_cols=186 Identities=16% Similarity=0.201 Sum_probs=157.6
Q ss_pred HHHhhhhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecC
Q 041467 473 AELSKATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSI 540 (746)
Q Consensus 473 ~~~~~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~ 540 (746)
.++....++|+..+.||+|+||.||+ ||||++.... ....+.+.+|+++++.++|||||+++++|.+.
T Consensus 62 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~ 141 (410)
T 3v8s_A 62 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 141 (410)
T ss_dssp HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECS
T ss_pred HhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEEC
Confidence 34555678999999999999999996 8999986532 22344588999999999999999999999999
Q ss_pred CcccchhhhccCCccc----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccc
Q 041467 541 DFEGFDFKAISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFL 616 (746)
Q Consensus 541 ~~~~lv~e~~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~ 616 (746)
+..|+||||+++|+|. ...+++.++..++.||+.||+|||+. +|+||||||+|||++.+|.+||+|||+|+..
T Consensus 142 ~~~~lV~E~~~gg~L~~~l~~~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFG~a~~~ 218 (410)
T 3v8s_A 142 RYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKM 218 (410)
T ss_dssp SEEEEEECCCTTEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred CEEEEEEeCCCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEeccceeEee
Confidence 9999999999999986 45789999999999999999999999 9999999999999999999999999999875
Q ss_pred cCCCCCCCcccccccccccccccccccccccccccc-cCCCccceeeccceee
Q 041467 617 YGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLE-NREKRHTVMSFPQRFA 668 (746)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~-~~~~~~DiwSlG~i~~ 668 (746)
.... .....+.+||+.|||||++.+.... .++.++||||+||++|
T Consensus 219 ~~~~-------~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvily 264 (410)
T 3v8s_A 219 NKEG-------MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLY 264 (410)
T ss_dssp CTTS-------EEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHH
T ss_pred ccCC-------cccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHH
Confidence 3221 1123357899999999999876521 1345699999999999
No 86
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=1.9e-34 Score=305.40 Aligned_cols=179 Identities=21% Similarity=0.306 Sum_probs=151.2
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhh
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFK 548 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e 548 (746)
.++|+..+.||+|+||.||+ ||||++.... ....+.+.+|+.+++.++|||||++++++.+.+..++|||
T Consensus 6 ~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 85 (323)
T 3tki_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (323)
T ss_dssp TTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEE
Confidence 46899999999999999997 8999986443 2234568899999999999999999999999999999999
Q ss_pred hccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCC
Q 041467 549 AISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623 (746)
Q Consensus 549 ~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~ 623 (746)
|+++|++. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.+.....
T Consensus 86 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~-- 160 (323)
T 3tki_A 86 YCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR-- 160 (323)
T ss_dssp CCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTE--
T ss_pred cCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceeccCCc--
Confidence 99999886 34689999999999999999999999 999999999999999999999999999986532211
Q ss_pred CcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 624 TAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 624 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.......+||+.|+|||++.+..+. +.++||||+||++|
T Consensus 161 ----~~~~~~~~gt~~y~aPE~~~~~~~~--~~~~DiwslG~il~ 199 (323)
T 3tki_A 161 ----ERLLNKMCGTLPYVAPELLKRREFH--AEPVDVWSCGIVLT 199 (323)
T ss_dssp ----ECCBCSCCSCGGGSCHHHHHCSSBC--HHHHHHHHHHHHHH
T ss_pred ----ccccCCCccCcCccCcHHhccCCCC--CCcccHHHHHHHHH
Confidence 1222347899999999999877652 23599999999998
No 87
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=3e-32 Score=296.73 Aligned_cols=294 Identities=18% Similarity=0.171 Sum_probs=251.9
Q ss_pred CCcccccCccccccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccc
Q 041467 4 NNLLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDIL 83 (746)
Q Consensus 4 n~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~ 83 (746)
|.+..+|+..+..+++|++|+|++|.+++..|..|..+++|++|+|++|.+++..|..|+++++|++|+|++|.+....+
T Consensus 55 ~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~ 134 (390)
T 3o6n_A 55 STMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPR 134 (390)
T ss_dssp CEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCT
T ss_pred CchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCH
Confidence 34455555556678999999999999998888899999999999999999998888889999999999999999976555
Q ss_pred hhhcCCCCCCEEEccCCCCc----CcccCCCCCCEEeccCCCccc--ccCCCCCcEeeCccCcccccCCccccCCCCCCE
Q 041467 84 TEICSLFKLERLRIDCGGRI----DSLGHLKSLLLLSLAFNQFLS--LSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSW 157 (746)
Q Consensus 84 ~~~~~l~~L~~L~l~~~~~~----~~~~~l~~L~~L~Ls~N~l~~--l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 157 (746)
..+.++++|++|+++++... ..+.++++|+.|++++|++.. +..+++|+.|++++|.+++. ...++|+.
T Consensus 135 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~L~~L~l~~n~l~~~-----~~~~~L~~ 209 (390)
T 3o6n_A 135 GIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTL-----AIPIAVEE 209 (390)
T ss_dssp TTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCCGGGCTTCSEEECCSSCCSEE-----ECCSSCSE
T ss_pred HHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccccccccccceeeccccccccc-----CCCCcceE
Confidence 55799999999999986543 458899999999999999965 46789999999999999853 44578999
Q ss_pred EEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCee
Q 041467 158 LNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWL 237 (746)
Q Consensus 158 L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L 237 (746)
|++++|.++.. +. ...++|+.|++++|.+++. ..+..++ +|+.|++++|.+++..|..|.++++|++|
T Consensus 210 L~l~~n~l~~~-------~~--~~~~~L~~L~l~~n~l~~~--~~l~~l~-~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 277 (390)
T 3o6n_A 210 LDASHNSINVV-------RG--PVNVELTILKLQHNNLTDT--AWLLNYP-GLVEVDLSYNELEKIMYHPFVKMQRLERL 277 (390)
T ss_dssp EECCSSCCCEE-------EC--CCCSSCCEEECCSSCCCCC--GGGGGCT-TCSEEECCSSCCCEEESGGGTTCSSCCEE
T ss_pred EECCCCeeeec-------cc--cccccccEEECCCCCCccc--HHHcCCC-CccEEECCCCcCCCcChhHccccccCCEE
Confidence 99999999763 22 2347999999999999853 5788887 79999999999999889999999999999
Q ss_pred ecccccceecCCcCCCCCCCCceeecccccccccccccccccChHHhhhccCCCCCCccccCCCCCCeeeecCCcCcccc
Q 041467 238 TMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTL 317 (746)
Q Consensus 238 ~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 317 (746)
+|++|++.+ +|..+..+++|++|+|++|+++ .+|..+..+++|+.|++++|++++ +
T Consensus 278 ~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~----------------------~~~~~~~~l~~L~~L~L~~N~i~~-~ 333 (390)
T 3o6n_A 278 YISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL----------------------HVERNQPQFDRLENLYLDHNSIVT-L 333 (390)
T ss_dssp ECCSSCCCE-EECSSSCCTTCCEEECCSSCCC----------------------CCGGGHHHHTTCSEEECCSSCCCC-C
T ss_pred ECCCCcCcc-cCcccCCCCCCCEEECCCCcce----------------------ecCccccccCcCCEEECCCCccce-e
Confidence 999999986 5677789999999999999987 445567778899999999999984 5
Q ss_pred chhhhhcccccceEEccCcccccc
Q 041467 318 PQQILSVTTLSLYLELDNNLLNGS 341 (746)
Q Consensus 318 p~~~~~l~~l~~~L~Ls~N~l~~~ 341 (746)
| +..++.+ +.|++++|++++.
T Consensus 334 ~--~~~~~~L-~~L~l~~N~~~~~ 354 (390)
T 3o6n_A 334 K--LSTHHTL-KNLTLSHNDWDCN 354 (390)
T ss_dssp C--CCTTCCC-SEEECCSSCEEHH
T ss_pred C--chhhccC-CEEEcCCCCccch
Confidence 5 6677888 6899999999864
No 88
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=6.3e-34 Score=313.35 Aligned_cols=178 Identities=20% Similarity=0.312 Sum_probs=152.3
Q ss_pred hhhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccc
Q 041467 477 KATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 477 ~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~l 545 (746)
...++|+..+.||+|+||.||+ ||+|++.... ....+.+.+|++++++++|||||++++++.+.+..++
T Consensus 8 ~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~l 87 (444)
T 3soa_A 8 RFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYL 87 (444)
T ss_dssp HHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEE
T ss_pred cccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEE
Confidence 3456799999999999999997 8999886432 3345678999999999999999999999999999999
Q ss_pred hhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeC---CCCcEEEcccccccccc
Q 041467 546 DFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLD---QDVVTHVGDLGLAKFLY 617 (746)
Q Consensus 546 v~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~---~~~~~ki~DfGla~~~~ 617 (746)
||||+.+|++. ...+++.++..++.||+.|++|||+. +|+||||||+|||++ +++.+||+|||+|+...
T Consensus 88 v~E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~ 164 (444)
T 3soa_A 88 IFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVE 164 (444)
T ss_dssp EECCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCC
T ss_pred EEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCceeEEec
Confidence 99999999985 46789999999999999999999999 999999999999998 56889999999998753
Q ss_pred CCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 618 GYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
... ......+||+.|+|||++.+..++. ++||||+||++|
T Consensus 165 ~~~--------~~~~~~~gt~~Y~APE~l~~~~~~~---~~DIwSlGvily 204 (444)
T 3soa_A 165 GEQ--------QAWFGFAGTPGYLSPEVLRKDPYGK---PVDLWACGVILY 204 (444)
T ss_dssp TTC--------CBCCCSCSCGGGCCHHHHTTCCBCT---HHHHHHHHHHHH
T ss_pred CCC--------ceeecccCCcccCCHHHhcCCCCCC---ccccHHHHHHHH
Confidence 321 1223478999999999998877755 599999999998
No 89
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=1.9e-34 Score=311.49 Aligned_cols=230 Identities=20% Similarity=0.245 Sum_probs=165.7
Q ss_pred hcCCCCCCeEeecCCeeEEE------------EEeehhhhh-hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccc
Q 041467 479 TNNFSPANKIREGGFNIVYN------------VAMKVANLK-QKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~------------vavK~~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~l 545 (746)
..+|+..+.||+|+||.||+ ||||++... .....+.+.+|++++++++|||||++++++...+..++
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 123 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence 35799999999999999996 899998654 23445679999999999999999999999999999999
Q ss_pred hhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCC
Q 041467 546 DFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGY 619 (746)
Q Consensus 546 v~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~ 619 (746)
||||+++|+|. ...+++.++..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 124 v~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~ 200 (373)
T 2qol_A 124 VTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRVLEDD 200 (373)
T ss_dssp EEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred EEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCccccccccC
Confidence 99999999986 23689999999999999999999999 9999999999999999999999999999876432
Q ss_pred CCCCCcccccccccccccccccccccccccccccCCCccceeeccceeeccc--cccc----------cchhhc-cccCC
Q 041467 620 EPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNE--KKQN----------KSILKS-AGIKG 686 (746)
Q Consensus 620 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~--~~~~----------~~i~~~-~~~~~ 686 (746)
... ........+|..|+|||++.+..++.+ +|||||||++|... .... ..+... .....
T Consensus 201 ~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~---~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~~~~~~~~ 272 (373)
T 2qol_A 201 PEA-----AYTTRGGKIPIRWTSPEAIAYRKFTSA---SDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPP 272 (373)
T ss_dssp ------------------CTTSCHHHHHHCCCCHH---HHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHTTEECCCC
T ss_pred Ccc-----ceeccCCCcCCCccChhhhccCCcCch---hcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCC
Confidence 211 111222346788999999988877655 99999999998321 1110 011111 11122
Q ss_pred CccHHHHHHhhCCCCCCCCC-CCCccchhhhccc
Q 041467 687 KKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLR 719 (746)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~ 719 (746)
....+.+..++..|+...|. ||++.++...+++
T Consensus 273 ~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~ 306 (373)
T 2qol_A 273 MDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDK 306 (373)
T ss_dssp TTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHH
Confidence 23344555555556666666 8888876665544
No 90
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=5.9e-34 Score=306.31 Aligned_cols=176 Identities=22% Similarity=0.354 Sum_probs=152.5
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccch
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
..++|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++|||||++++++.+.+..++|
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv 106 (362)
T 2bdw_A 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 106 (362)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 456799999999999999997 8999986542 33456789999999999999999999999999999999
Q ss_pred hhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCC---CcEEEccccccccccC
Q 041467 547 FKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQD---VVTHVGDLGLAKFLYG 618 (746)
Q Consensus 547 ~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~---~~~ki~DfGla~~~~~ 618 (746)
|||+++|++. ...+++.++..++.||+.||+|||+. +|+||||||+||+++.+ +.+||+|||+++....
T Consensus 107 ~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~ 183 (362)
T 2bdw_A 107 FDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 183 (362)
T ss_dssp ECCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTT
T ss_pred EecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcceEecC
Confidence 9999999985 45689999999999999999999999 99999999999999764 4699999999987632
Q ss_pred CCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 619 YEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 619 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
. ......+||+.|+|||++.+..++. ++||||+||++|
T Consensus 184 ~---------~~~~~~~gt~~y~aPE~~~~~~~~~---~~DiwslG~il~ 221 (362)
T 2bdw_A 184 S---------EAWHGFAGTPGYLSPEVLKKDPYSK---PVDIWACGVILY 221 (362)
T ss_dssp C---------CSCCCSCSCTTTCCHHHHTTCCCCT---HHHHHHHHHHHH
T ss_pred C---------cccccCCCCccccCHHHHccCCCCc---hhhHHHHHHHHH
Confidence 2 1123468999999999998877654 599999999999
No 91
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=1.2e-34 Score=302.16 Aligned_cols=225 Identities=16% Similarity=0.224 Sum_probs=173.9
Q ss_pred hcCCCCCCeEeecCCeeEEE----------------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCc
Q 041467 479 TNNFSPANKIREGGFNIVYN----------------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDF 542 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~----------------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~ 542 (746)
.++|+..+.||+|+||.||+ ||+|++........+.+.+|++++++++|||||++++++.+.+.
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE 86 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTC
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCC
Confidence 45788999999999999996 78998876666667789999999999999999999999999999
Q ss_pred ccchhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCc--------EEEc
Q 041467 543 EGFDFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVV--------THVG 608 (746)
Q Consensus 543 ~~lv~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~--------~ki~ 608 (746)
.++||||+++|+|. ...+++.++..++.|++.||+|||++ +|+||||||+||+++.++. +||+
T Consensus 87 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~ 163 (289)
T 4fvq_A 87 NILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPFIKLS 163 (289)
T ss_dssp CEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCCEEEEC
T ss_pred CEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcccccccceeeec
Confidence 99999999999986 23489999999999999999999999 9999999999999988877 9999
Q ss_pred cccccccccCCCCCCCcccccccccccccccccccccccc-cccccCCCccceeeccceeeccccc-c----------cc
Q 041467 609 DLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAA-RNLENREKRHTVMSFPQRFALNEKK-Q----------NK 676 (746)
Q Consensus 609 DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~~~~~DiwSlG~i~~~~~~~-~----------~~ 676 (746)
|||+++.... .....||+.|+|||++.+ ..++. ++||||+||++|..... . ..
T Consensus 164 Dfg~~~~~~~------------~~~~~~~~~y~aPE~~~~~~~~~~---~~DiwslG~il~el~~g~~~~~~~~~~~~~~ 228 (289)
T 4fvq_A 164 DPGISITVLP------------KDILQERIPWVPPECIENPKNLNL---ATDKWSFGTTLWEICSGGDKPLSALDSQRKL 228 (289)
T ss_dssp CCCSCTTTSC------------HHHHHHTTTTSCHHHHHCGGGCCH---HHHHHHHHHHHHHHHTTTCCTTTTSCHHHHH
T ss_pred cCcccccccC------------ccccCCcCcccCHHHhCCCCCCCc---hhHHHHHHHHHHHHHcCCCCCccccchHHHH
Confidence 9999875421 122568999999999987 44444 59999999999822210 0 00
Q ss_pred chhhcc----ccCCCccHHHHHHhhCCCCCCCCCCCCccchhhhcccCCCCC
Q 041467 677 SILKSA----GIKGKKTVSFFLSLLSPSCSVFPLTPSSNSFTLLGLRLPSRS 724 (746)
Q Consensus 677 ~i~~~~----~~~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~ 724 (746)
...... ...+.+....+..|++.++. +||+..++...++.+.++.
T Consensus 229 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~---~Rps~~~ll~~l~~l~~p~ 277 (289)
T 4fvq_A 229 QFYEDRHQLPAPKAAELANLINNCMDYEPD---HRPSFRAIIRDLNSLFTPD 277 (289)
T ss_dssp HHHHTTCCCCCCSSCTTHHHHHHHSCSSGG---GSCCHHHHHHHHHTCC---
T ss_pred HHhhccCCCCCCCCHHHHHHHHHHcCCChh---HCcCHHHHHHHHHHhcCCC
Confidence 111111 11224455666666655443 2788888887777766543
No 92
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=6.9e-34 Score=304.76 Aligned_cols=176 Identities=18% Similarity=0.254 Sum_probs=151.0
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhh-----hhHHHHHHHHHhhcCCCCceeeEEEEEecCCccc
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQKE-----ASRSFAAEFNALRNIRHRNLIKIITICSSIDFEG 544 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~-----~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~ 544 (746)
.+.|+..+.||+|+||.||+ ||||++...... ..+.+.+|+++++.++|||||++++++.+.+..+
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 45789999999999999997 899998654321 3567999999999999999999999999999999
Q ss_pred chhhhccCCccc---------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCc---EEEccccc
Q 041467 545 FDFKAISNGQLR---------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVV---THVGDLGL 612 (746)
Q Consensus 545 lv~e~~~~g~l~---------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~---~ki~DfGl 612 (746)
+||||+++|+|. ...+++..+..++.||+.||+|||++ +|+||||||+||+++.++. +||+|||+
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~ 179 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGV 179 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCcc
Confidence 999999999984 22489999999999999999999999 9999999999999976554 99999999
Q ss_pred cccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 613 AKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 613 a~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
++...... ......+||+.|+|||++.+..++. ++||||+||++|
T Consensus 180 a~~~~~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~---~~DiwslG~il~ 224 (351)
T 3c0i_A 180 AIQLGESG--------LVAGGRVGTPHFMAPEVVKREPYGK---PVDVWGCGVILF 224 (351)
T ss_dssp CEECCTTS--------CBCCCCCSCGGGCCHHHHTTCCBCT---HHHHHHHHHHHH
T ss_pred eeEecCCC--------eeecCCcCCcCccCHHHHcCCCCCc---hHhhHHHHHHHH
Confidence 98764321 1123467999999999998877654 599999999998
No 93
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=2.8e-32 Score=313.41 Aligned_cols=296 Identities=18% Similarity=0.174 Sum_probs=255.1
Q ss_pred CCcccccCccccccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccc
Q 041467 4 NNLLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDIL 83 (746)
Q Consensus 4 n~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~ 83 (746)
|.+..+|+..+..+++|++|+|++|.+++..|..|+.+++|++|+|++|.|++..|..|+++++|++|+|++|.+.+..+
T Consensus 61 ~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~ 140 (597)
T 3oja_B 61 STMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPR 140 (597)
T ss_dssp CEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCT
T ss_pred CCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCH
Confidence 33445555556678999999999999998888899999999999999999999888889999999999999999986666
Q ss_pred hhhcCCCCCCEEEccCCCCc----CcccCCCCCCEEeccCCCccc--ccCCCCCcEeeCccCcccccCCccccCCCCCCE
Q 041467 84 TEICSLFKLERLRIDCGGRI----DSLGHLKSLLLLSLAFNQFLS--LSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSW 157 (746)
Q Consensus 84 ~~~~~l~~L~~L~l~~~~~~----~~~~~l~~L~~L~Ls~N~l~~--l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 157 (746)
..|+++++|++|++++|... ..|+++++|+.|+|++|.+.. +..+++|+.|++++|.+++ +...++|+.
T Consensus 141 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~L~l~~n~l~~-----l~~~~~L~~ 215 (597)
T 3oja_B 141 GIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLST-----LAIPIAVEE 215 (597)
T ss_dssp TTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCCGGGCTTCSEEECCSSCCSE-----EECCTTCSE
T ss_pred HHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcChhhhhhhhhhhcccCcccc-----ccCCchhhe
Confidence 66899999999999986543 468999999999999999965 4678999999999999985 345678999
Q ss_pred EEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCee
Q 041467 158 LNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWL 237 (746)
Q Consensus 158 L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L 237 (746)
|++++|.++.. +..+ .++|+.|+|++|.+++ +..+..++ +|+.|++++|.+++..|..|+++++|+.|
T Consensus 216 L~ls~n~l~~~-------~~~~--~~~L~~L~L~~n~l~~--~~~l~~l~-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 283 (597)
T 3oja_B 216 LDASHNSINVV-------RGPV--NVELTILKLQHNNLTD--TAWLLNYP-GLVEVDLSYNELEKIMYHPFVKMQRLERL 283 (597)
T ss_dssp EECCSSCCCEE-------ECSC--CSCCCEEECCSSCCCC--CGGGGGCT-TCSEEECCSSCCCEEESGGGTTCSSCCEE
T ss_pred eeccCCccccc-------cccc--CCCCCEEECCCCCCCC--ChhhccCC-CCCEEECCCCccCCCCHHHhcCccCCCEE
Confidence 99999999753 2222 3689999999999986 46788887 79999999999999999999999999999
Q ss_pred ecccccceecCCcCCCCCCCCceeecccccccccccccccccChHHhhhccCCCCCCccccCCCCCCeeeecCCcCcccc
Q 041467 238 TMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTL 317 (746)
Q Consensus 238 ~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 317 (746)
+|++|++.+ +|..+..+++|+.|+|++|.++ .+|..++.+++|+.|+|++|+|++ +
T Consensus 284 ~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~----------------------~i~~~~~~l~~L~~L~L~~N~l~~-~ 339 (597)
T 3oja_B 284 YISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL----------------------HVERNQPQFDRLENLYLDHNSIVT-L 339 (597)
T ss_dssp ECTTSCCCE-EECSSSCCTTCCEEECCSSCCC----------------------CCGGGHHHHTTCSEEECCSSCCCC-C
T ss_pred ECCCCCCCC-CCcccccCCCCcEEECCCCCCC----------------------ccCcccccCCCCCEEECCCCCCCC-c
Confidence 999999986 5777888999999999999987 456677888999999999999985 4
Q ss_pred chhhhhcccccceEEccCccccccCc
Q 041467 318 PQQILSVTTLSLYLELDNNLLNGSLP 343 (746)
Q Consensus 318 p~~~~~l~~l~~~L~Ls~N~l~~~~p 343 (746)
| +..++.| ..|++++|++++..+
T Consensus 340 ~--~~~~~~L-~~L~l~~N~~~~~~~ 362 (597)
T 3oja_B 340 K--LSTHHTL-KNLTLSHNDWDCNSL 362 (597)
T ss_dssp C--CCTTCCC-SEEECCSSCEEHHHH
T ss_pred C--hhhcCCC-CEEEeeCCCCCChhH
Confidence 4 5667788 689999999987533
No 94
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=3.2e-34 Score=299.42 Aligned_cols=176 Identities=19% Similarity=0.274 Sum_probs=150.6
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhh
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFK 548 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e 548 (746)
++|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++|||||++++++.+.+..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 5788999999999999997 8999986443 3334678899999999999999999999999999999999
Q ss_pred hccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCC
Q 041467 549 AISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623 (746)
Q Consensus 549 ~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~ 623 (746)
|+.++.+. ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+|+......
T Consensus 82 ~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~--- 155 (292)
T 3o0g_A 82 FCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPV--- 155 (292)
T ss_dssp CCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCSCC---
T ss_pred cCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCCcc---
Confidence 99865543 45789999999999999999999999 99999999999999999999999999998763221
Q ss_pred CcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 624 TAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 624 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.......||+.|+|||++.+... ++.++||||+||++|
T Consensus 156 -----~~~~~~~~t~~y~aPE~~~~~~~--~~~~~DiwslG~il~ 193 (292)
T 3o0g_A 156 -----RCYSAEVVTLWYRPPDVLFGAKL--YSTSIDMWSAGCIFA 193 (292)
T ss_dssp -----SCCCSCCSCGGGCCHHHHTTCSC--CCTHHHHHHHHHHHH
T ss_pred -----ccccCCccccCCcChHHHcCCCC--cCchHHHHHHHHHHH
Confidence 12234678999999999987652 234699999999998
No 95
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=4.6e-34 Score=316.45 Aligned_cols=176 Identities=23% Similarity=0.322 Sum_probs=153.9
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccch
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
.++|...+.||+|+||.||+ ||||++.... ....+.+.+|+++++.++|||||++++++...+..++|
T Consensus 15 ~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv 94 (476)
T 2y94_A 15 IGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMV 94 (476)
T ss_dssp ETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEE
Confidence 46799999999999999996 9999986543 23456789999999999999999999999999999999
Q ss_pred hhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCC
Q 041467 547 FKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 547 ~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~ 621 (746)
|||+++|+|. ...+++.++..++.||+.|++|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 95 ~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~-- 169 (476)
T 2y94_A 95 MEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG-- 169 (476)
T ss_dssp EECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECCTT--
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhcccc--
Confidence 9999999985 45689999999999999999999999 9999999999999999999999999999876321
Q ss_pred CCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......+||+.|+|||++.+..+. +.++||||+||++|
T Consensus 170 -------~~~~~~~gt~~y~aPE~~~~~~~~--~~~~DiwSlGvil~ 207 (476)
T 2y94_A 170 -------EFLRTSCGSPNYAAPEVISGRLYA--GPEVDIWSSGVILY 207 (476)
T ss_dssp -------CCBCCCCSCSTTCCHHHHTTCCBC--SHHHHHHHHHHHHH
T ss_pred -------ccccccCCCcCeEChhhccCCCCC--CCcceehhhHHHHH
Confidence 122346799999999999887653 33699999999998
No 96
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=6.1e-34 Score=305.41 Aligned_cols=176 Identities=24% Similarity=0.274 Sum_probs=153.2
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhh------hhHHHHHHHHHhhcCCCCceeeEEEEEecCCc
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKE------ASRSFAAEFNALRNIRHRNLIKIITICSSIDF 542 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~------~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~ 542 (746)
..+.|+..+.||+|+||.||+ ||||++...... ..+.+.+|+.++++++|||||++++++.+.+.
T Consensus 10 ~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~ 89 (361)
T 2yab_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTD 89 (361)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSE
T ss_pred hhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCE
Confidence 456799999999999999997 899998654321 24679999999999999999999999999999
Q ss_pred ccchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCC----cEEEcccccc
Q 041467 543 EGFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDV----VTHVGDLGLA 613 (746)
Q Consensus 543 ~~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~----~~ki~DfGla 613 (746)
.++||||+++|+|. ...+++.++..++.||+.|++|||+. +|+||||||+||+++.++ .+||+|||++
T Consensus 90 ~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~DFG~a 166 (361)
T 2yab_A 90 VVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (361)
T ss_dssp EEEEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCSSC
T ss_pred EEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEecCCc
Confidence 99999999999986 45689999999999999999999999 999999999999998776 7999999999
Q ss_pred ccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 614 KFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
+.+.... .....+||+.|+|||++.+..++. ++||||+||++|
T Consensus 167 ~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~---~~DiwslGvil~ 209 (361)
T 2yab_A 167 HEIEDGV---------EFKNIFGTPEFVAPEIVNYEPLGL---EADMWSIGVITY 209 (361)
T ss_dssp EECCTTC---------CCCCCCSCGGGCCHHHHTTCCCCT---HHHHHHHHHHHH
T ss_pred eEcCCCC---------ccccCCCCccEECchHHcCCCCCc---cccHHHHHHHHH
Confidence 8763321 123467999999999998877654 599999999998
No 97
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=2.8e-34 Score=309.20 Aligned_cols=215 Identities=24% Similarity=0.230 Sum_probs=162.0
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHH-hhcCCCCceeeEEEEEecCCccc
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNA-LRNIRHRNLIKIITICSSIDFEG 544 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~-l~~l~HpnIv~l~~~~~~~~~~~ 544 (746)
..++|+..+.||+|+||.||+ ||||++.... ....+.+.+|..+ ++.++|||||++++++.+.+..|
T Consensus 36 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~ 115 (373)
T 2r5t_A 36 KPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLY 115 (373)
T ss_dssp CGGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEE
T ss_pred ChhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEE
Confidence 346799999999999999997 8999986543 2334556778776 67899999999999999999999
Q ss_pred chhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCC
Q 041467 545 FDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGY 619 (746)
Q Consensus 545 lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~ 619 (746)
+||||+++|+|. ...+++.++..++.||+.||+|||++ +|+||||||+|||++.+|++||+|||+|+.....
T Consensus 116 lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~ 192 (373)
T 2r5t_A 116 FVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEH 192 (373)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCC
T ss_pred EEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCccccccccC
Confidence 999999999985 45689999999999999999999999 9999999999999999999999999999864322
Q ss_pred CCCCCcccccccccccccccccccccccccccccCCCccceeeccceeeccccc-----------cccchhhc----ccc
Q 041467 620 EPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEKK-----------QNKSILKS----AGI 684 (746)
Q Consensus 620 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~~-----------~~~~i~~~----~~~ 684 (746)
. ......+||+.|+|||++.+..++. ++||||+||++|..... ....+... .+.
T Consensus 193 ~--------~~~~~~~gt~~y~aPE~~~~~~~~~---~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~ 261 (373)
T 2r5t_A 193 N--------STTSTFCGTPEYLAPEVLHKQPYDR---TVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPN 261 (373)
T ss_dssp C--------CCCCSBSCCCCCCCHHHHTTCCCCT---HHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHSCCCCCSS
T ss_pred C--------CccccccCCccccCHHHhCCCCCCc---hhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCCC
Confidence 1 1233478999999999998877654 59999999999921111 11112221 112
Q ss_pred CCCccHHHHHHhhCCCCCCCCC
Q 041467 685 KGKKTVSFFLSLLSPSCSVFPL 706 (746)
Q Consensus 685 ~~~~~~~~~~~~~~~~~~~~p~ 706 (746)
.+......+..|+..++.+||.
T Consensus 262 ~~~~~~~li~~lL~~dp~~R~~ 283 (373)
T 2r5t_A 262 ITNSARHLLEGLLQKDRTKRLG 283 (373)
T ss_dssp SCHHHHHHHHHHTCSSGGGSTT
T ss_pred CCHHHHHHHHHHcccCHHhCCC
Confidence 2344566777777777776665
No 98
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=3e-34 Score=304.50 Aligned_cols=214 Identities=20% Similarity=0.218 Sum_probs=161.1
Q ss_pred hcCCCCCCeEeecCCeeEEE------------EEeehhhhhh----hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCc
Q 041467 479 TNNFSPANKIREGGFNIVYN------------VAMKVANLKQ----KEASRSFAAEFNALRNIRHRNLIKIITICSSIDF 542 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~------------vavK~~~~~~----~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~ 542 (746)
.++|+..+.||+|+||.||+ ||||++.... ......+.+|++++++++|||||++++++...+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 46799999999999999995 8999886432 2334568899999999999999999999999999
Q ss_pred ccchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccccccccc
Q 041467 543 EGFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617 (746)
Q Consensus 543 ~~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~ 617 (746)
.++||||+++|+|. ...+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~ 172 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESI 172 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC----
T ss_pred EEEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCcccccc
Confidence 99999999999885 45689999999999999999999999 99999999999999999999999999997642
Q ss_pred CCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeeccccc-----------cccchhhc----c
Q 041467 618 GYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEKK-----------QNKSILKS----A 682 (746)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~~-----------~~~~i~~~----~ 682 (746)
... ......+||+.|+|||++.+..++. ++||||+||++|..... ....+... .
T Consensus 173 ~~~--------~~~~~~~gt~~y~aPE~~~~~~~~~---~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~p 241 (327)
T 3a62_A 173 HDG--------TVTHTFCGTIEYMAPEILMRSGHNR---AVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLP 241 (327)
T ss_dssp --------------CTTSSCCTTSCHHHHTTSCCCT---HHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCC
T ss_pred cCC--------ccccccCCCcCccCHhhCcCCCCCC---cccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCC
Confidence 211 1223467999999999998876654 59999999999821111 11112211 1
Q ss_pred ccCCCccHHHHHHhhCCCCCCCCC
Q 041467 683 GIKGKKTVSFFLSLLSPSCSVFPL 706 (746)
Q Consensus 683 ~~~~~~~~~~~~~~~~~~~~~~p~ 706 (746)
+..+....+.+..|+..++..||.
T Consensus 242 ~~~~~~~~~li~~~L~~dp~~R~~ 265 (327)
T 3a62_A 242 PYLTQEARDLLKKLLKRNAASRLG 265 (327)
T ss_dssp TTSCHHHHHHHHHHSCSCGGGSTT
T ss_pred CCCCHHHHHHHHHHHhcCHhhccC
Confidence 122345567778888887777775
No 99
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=5.7e-34 Score=308.41 Aligned_cols=175 Identities=19% Similarity=0.223 Sum_probs=152.5
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhh
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKA 549 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~ 549 (746)
.++|+..+.||+|+||.||+ ||+|++..........+.+|++++++++|||||++++++.+....++||||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 46799999999999999997 899988655444556789999999999999999999999999999999999
Q ss_pred ccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeC--CCCcEEEccccccccccCCCC
Q 041467 550 ISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLD--QDVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 550 ~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~--~~~~~ki~DfGla~~~~~~~~ 621 (746)
+++|+|. ...+++.++..++.||+.||+|||+. +|+||||||+||+++ .++.+||+|||+|+......
T Consensus 130 ~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~- 205 (387)
T 1kob_A 130 LSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE- 205 (387)
T ss_dssp CCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS-
T ss_pred CCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccceecCCCc-
Confidence 9999985 23689999999999999999999999 999999999999997 45789999999998763221
Q ss_pred CCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.....+||+.|+|||++.+..++.+ +||||+||++|
T Consensus 206 --------~~~~~~gt~~y~aPE~~~~~~~~~~---~DiwSlG~il~ 241 (387)
T 1kob_A 206 --------IVKVTTATAEFAAPEIVDREPVGFY---TDMWAIGVLGY 241 (387)
T ss_dssp --------CEEEECSSGGGCCHHHHTTCCBCHH---HHHHHHHHHHH
T ss_pred --------ceeeeccCCCccCchhccCCCCCCc---ccEeeHhHHHH
Confidence 1223579999999999988777655 99999999998
No 100
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=2.4e-34 Score=318.81 Aligned_cols=215 Identities=21% Similarity=0.193 Sum_probs=160.9
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccc
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~l 545 (746)
..++|+..+.||+|+||.||+ ||||++.... ......+.+|+++++.++|||||+++++|...+..++
T Consensus 146 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~l 225 (446)
T 4ejn_A 146 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCF 225 (446)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEE
T ss_pred ChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEE
Confidence 346799999999999999996 9999987542 3334568899999999999999999999999999999
Q ss_pred hhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCC
Q 041467 546 DFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRH-HCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGY 619 (746)
Q Consensus 546 v~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~-~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~ 619 (746)
||||+++|+|. ...+++..+..++.||+.||+|||+ . +|+||||||+|||++.++.+||+|||+|+.....
T Consensus 226 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 302 (446)
T 4ejn_A 226 VMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD 302 (446)
T ss_dssp EECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-
T ss_pred EEeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCCCceeccCC
Confidence 99999999985 4578999999999999999999998 7 9999999999999999999999999999864221
Q ss_pred CCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccccc-----------ccchhhcc----cc
Q 041467 620 EPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEKKQ-----------NKSILKSA----GI 684 (746)
Q Consensus 620 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~~~-----------~~~i~~~~----~~ 684 (746)
. ......+||+.|+|||++.+..++. ++||||+||++|...... ...+.... ..
T Consensus 303 ~--------~~~~~~~gt~~y~aPE~~~~~~~~~---~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~~ 371 (446)
T 4ejn_A 303 G--------ATMKTFCGTPEYLAPEVLEDNDYGR---AVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRT 371 (446)
T ss_dssp ------------CCSSSCGGGCCHHHHHTSCCCT---HHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCTT
T ss_pred C--------cccccccCCccccCHhhcCCCCCCC---ccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCCCCcc
Confidence 1 2233478999999999998887755 499999999998221110 11111111 11
Q ss_pred CCCccHHHHHHhhCCCCCCCCC
Q 041467 685 KGKKTVSFFLSLLSPSCSVFPL 706 (746)
Q Consensus 685 ~~~~~~~~~~~~~~~~~~~~p~ 706 (746)
.+.+....+..|+..++..||.
T Consensus 372 ~~~~~~~li~~~L~~dP~~R~~ 393 (446)
T 4ejn_A 372 LGPEAKSLLSGLLKKDPKQRLG 393 (446)
T ss_dssp SCHHHHHHHHHHTCSSTTTSTT
T ss_pred CCHHHHHHHHHHcccCHHHhCC
Confidence 2244566777777777776663
No 101
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=1e-33 Score=298.33 Aligned_cols=179 Identities=22% Similarity=0.297 Sum_probs=148.6
Q ss_pred hhhcCCCCCCeEeecCCeeEEE--------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccch
Q 041467 477 KATNNFSPANKIREGGFNIVYN--------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 477 ~~~~~~~~~~~ig~g~~g~v~~--------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
...++|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++|||||++++++.+.+..++|
T Consensus 18 ~l~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 97 (311)
T 3niz_A 18 GLMEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLV 97 (311)
T ss_dssp CSSCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEE
T ss_pred chHhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEE
Confidence 4567899999999999999997 8999986443 22346788999999999999999999999999999999
Q ss_pred hhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCC
Q 041467 547 FKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 547 ~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~ 621 (746)
|||++++... ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+|+......
T Consensus 98 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~- 173 (311)
T 3niz_A 98 FEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIPV- 173 (311)
T ss_dssp EECCSEEHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETTSCC-
T ss_pred EcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecCCCc-
Confidence 9999854332 34589999999999999999999999 99999999999999999999999999998763221
Q ss_pred CCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.......||+.|+|||++.+... ++.++||||+||++|
T Consensus 174 -------~~~~~~~~t~~y~aPE~~~~~~~--~~~~~DiwslG~il~ 211 (311)
T 3niz_A 174 -------RSYTHEVVTLWYRAPDVLMGSKK--YSTSVDIWSIGCIFA 211 (311)
T ss_dssp -------C---CCCCCCTTCCHHHHTTCCS--CCTHHHHHHHHHHHH
T ss_pred -------ccccCCcccCCcCCHHHhcCCCC--CCchHHhHHHHHHHH
Confidence 12233578999999999976432 234699999999998
No 102
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=5.6e-34 Score=317.09 Aligned_cols=185 Identities=23% Similarity=0.285 Sum_probs=138.7
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhh--hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecC-----C
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLK--QKEASRSFAAEFNALRNIRHRNLIKIITICSSI-----D 541 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~-----~ 541 (746)
..++|+..+.||+|+||.||+ ||||++... .....+++.+|++++++++|||||++++++... .
T Consensus 51 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~ 130 (458)
T 3rp9_A 51 IPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFD 130 (458)
T ss_dssp SCTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred cCCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCc
Confidence 346899999999999999996 899988543 234456799999999999999999999999543 4
Q ss_pred cccchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccc
Q 041467 542 FEGFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFL 616 (746)
Q Consensus 542 ~~~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~ 616 (746)
..|+||||+. |++. ...+++.++..++.||+.||+|||+. +||||||||+|||++.++.+||+|||+|+..
T Consensus 131 ~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla~~~ 206 (458)
T 3rp9_A 131 ELYVVLEIAD-SDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLARTV 206 (458)
T ss_dssp CEEEEECCCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBCT
T ss_pred eEEEEEeccc-cchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccchhc
Confidence 6899999875 5554 45689999999999999999999999 9999999999999999999999999999876
Q ss_pred cCCCCCCC-------------------cccccccccccccccccccccccc-cccccCCCccceeeccceeec
Q 041467 617 YGYEPGTT-------------------AETASSSIGINGTVGYVAPVIIAA-RNLENREKRHTVMSFPQRFAL 669 (746)
Q Consensus 617 ~~~~~~~~-------------------~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~~~~~DiwSlG~i~~~ 669 (746)
........ .......+..+||++|||||++.. ..++ .++||||+||++|.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~---~~~DiwSlG~il~e 276 (458)
T 3rp9_A 207 DYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYT---EAIDVWSIGCIFAE 276 (458)
T ss_dssp TSCTTCCCCCC---------------------------CCCTTCCHHHHTTCCCCC---THHHHHHHHHHHHH
T ss_pred cCccccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCC---cHhHHHHHHHHHHH
Confidence 43221100 000123456789999999998754 4444 45999999999983
No 103
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=2e-34 Score=305.35 Aligned_cols=185 Identities=22% Similarity=0.262 Sum_probs=152.2
Q ss_pred hhhcCCCCCCeEeecCCeeEEE-------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCc----ccc
Q 041467 477 KATNNFSPANKIREGGFNIVYN-------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDF----EGF 545 (746)
Q Consensus 477 ~~~~~~~~~~~ig~g~~g~v~~-------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~----~~l 545 (746)
-..++|+..+.||+|+||.||+ ||||++..... ....+.+|+.++++++|||||++++++..... .++
T Consensus 21 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~l 99 (322)
T 3soc_A 21 FQSMPLQLLEVKARGRFGCVWKAQLLNEYVAVKIFPIQDK-QSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWL 99 (322)
T ss_dssp ETTEEEEEEEEEECSTTCEEEEEEETTEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred cchhhchhhheecccCceEEEEEEECCCEEEEEEeecCch-HHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEE
Confidence 3457899999999999999997 99999865432 33456779999999999999999999988554 589
Q ss_pred hhhhccCCccc----ccCCCHHHHHHHHHHHHHHHHHHHhc-------CCCCeEEcCCCCCCeeeCCCCcEEEccccccc
Q 041467 546 DFKAISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHH-------CQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614 (746)
Q Consensus 546 v~e~~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~-------~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~ 614 (746)
||||+++|+|. ...+++.++..++.|++.|++|||+. +.++|+||||||+||+++.++.+||+|||+|+
T Consensus 100 v~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~ 179 (322)
T 3soc_A 100 ITAFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLAL 179 (322)
T ss_dssp EEECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred EEecCCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCccc
Confidence 99999999986 45699999999999999999999986 23489999999999999999999999999998
Q ss_pred cccCCCCCCCcccccccccccccccccccccccccccc--cCCCccceeeccceee
Q 041467 615 FLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLE--NREKRHTVMSFPQRFA 668 (746)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~--~~~~~~DiwSlG~i~~ 668 (746)
........ .......||+.|+|||++.+.... .++.++|||||||++|
T Consensus 180 ~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~ 229 (322)
T 3soc_A 180 KFEAGKSA------GDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLW 229 (322)
T ss_dssp EECTTSCC------CCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHH
T ss_pred ccccccCc------cccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHH
Confidence 76433221 122346799999999999873221 1234599999999999
No 104
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=6e-34 Score=307.37 Aligned_cols=171 Identities=21% Similarity=0.229 Sum_probs=143.9
Q ss_pred CCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhccCC
Q 041467 483 SPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNG 553 (746)
Q Consensus 483 ~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~~~g 553 (746)
...+.||+|+||.||+ ||||++........+.+.+|++++++++|||||++++++.+.+..++||||+++|
T Consensus 92 ~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~ 171 (373)
T 2x4f_A 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGG 171 (373)
T ss_dssp EEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTC
T ss_pred ecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCC
Confidence 3467899999999997 8999987655556678999999999999999999999999999999999999999
Q ss_pred ccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeee--CCCCcEEEccccccccccCCCCCCCc
Q 041467 554 QLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL--DQDVVTHVGDLGLAKFLYGYEPGTTA 625 (746)
Q Consensus 554 ~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl--~~~~~~ki~DfGla~~~~~~~~~~~~ 625 (746)
+|. ...+++.++..++.||+.||+|||+. +|+||||||+|||+ +.++.+||+|||+++......
T Consensus 172 ~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~----- 243 (373)
T 2x4f_A 172 ELFDRIIDESYNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE----- 243 (373)
T ss_dssp EEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC-----
T ss_pred cHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc-----
Confidence 885 34689999999999999999999999 99999999999999 677899999999998763321
Q ss_pred ccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 626 ETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 626 ~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.....+||+.|+|||++.+..++. ++|||||||++|
T Consensus 244 ----~~~~~~gt~~y~aPE~~~~~~~~~---~~DiwslG~il~ 279 (373)
T 2x4f_A 244 ----KLKVNFGTPEFLAPEVVNYDFVSF---PTDMWSVGVIAY 279 (373)
T ss_dssp ----BCCCCCSSCTTCCHHHHTTCBCCH---HHHHHHHHHHHH
T ss_pred ----ccccccCCCcEeChhhccCCCCCc---HHhHHHHHHHHH
Confidence 122357999999999998776655 499999999998
No 105
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=2e-34 Score=301.35 Aligned_cols=179 Identities=22% Similarity=0.309 Sum_probs=148.6
Q ss_pred hcCCCCCCeEeecCCeeEEE-------------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecC--Ccc
Q 041467 479 TNNFSPANKIREGGFNIVYN-------------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSI--DFE 543 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~-------------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~--~~~ 543 (746)
.++|+..+.||+|+||.||+ ||||++........+.+.+|++++++++||||+++++++... ...
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 88 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 88 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSC
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCce
Confidence 46788999999999999985 899998766566667899999999999999999999998664 458
Q ss_pred cchhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccccccccc
Q 041467 544 GFDFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617 (746)
Q Consensus 544 ~lv~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~ 617 (746)
++||||+++|+|. ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 89 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~ 165 (295)
T 3ugc_A 89 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLP 165 (295)
T ss_dssp EEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCSCC---
T ss_pred EEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCccccccc
Confidence 8999999999986 33589999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 618 GYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
..... ........||..|+|||++.+..++.+ +||||+||++|
T Consensus 166 ~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~~l~ 208 (295)
T 3ugc_A 166 QDKEF-----FKVKEPGESPIFWYAPESLTESKFSVA---SDVWSFGVVLY 208 (295)
T ss_dssp ---------------CTTCGGGGCCHHHHHHCCCCHH---HHHHHHHHHHH
T ss_pred CCcce-----eeeccCCCCccceeCcHHhcCCCCChH---HHHHHHHHHHH
Confidence 33211 111223557888999999988877654 99999999998
No 106
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=2e-34 Score=312.09 Aligned_cols=230 Identities=18% Similarity=0.207 Sum_probs=174.1
Q ss_pred hhhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccch
Q 041467 477 KATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 477 ~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
...++|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++|||||+++++|...+..++|
T Consensus 111 ~~~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 190 (377)
T 3cbl_A 111 LNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIV 190 (377)
T ss_dssp CCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred EchHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEE
Confidence 3456788899999999999997 9999886432 23345688999999999999999999999999999999
Q ss_pred hhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCC
Q 041467 547 FKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620 (746)
Q Consensus 547 ~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~ 620 (746)
|||+++|++. ...+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+|+......
T Consensus 191 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~ 267 (377)
T 3cbl_A 191 MELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREEADGV 267 (377)
T ss_dssp EECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECTTSE
T ss_pred EEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceecCCCc
Confidence 9999999985 34689999999999999999999999 99999999999999999999999999998643211
Q ss_pred CCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc--cc---------ccchhhc--cccCCC
Q 041467 621 PGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK--KQ---------NKSILKS--AGIKGK 687 (746)
Q Consensus 621 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~--~~---------~~~i~~~--~~~~~~ 687 (746)
. ........++..|+|||++.+..++.+ +|||||||++|.... .. ....... ......
T Consensus 268 ~------~~~~~~~~~~~~y~aPE~~~~~~~~~~---~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~ 338 (377)
T 3cbl_A 268 Y------AASGGLRQVPVKWTAPEALNYGRYSSE---SDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPCPE 338 (377)
T ss_dssp E------ECCSSCCEEEGGGSCHHHHHHCEEEHH---HHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHTTCCCCCCT
T ss_pred e------eecCCCCCCCcCcCCHhHhccCCCCch---hhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCC
Confidence 0 011112346788999999988777655 999999999982211 10 0011111 111122
Q ss_pred ccHHHHHHhhCCCCCCCCC-CCCccchhhhcc
Q 041467 688 KTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGL 718 (746)
Q Consensus 688 ~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~ 718 (746)
.+.+.+..++..|+...|. ||++.++...++
T Consensus 339 ~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~ 370 (377)
T 3cbl_A 339 LCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQ 370 (377)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCHHHHHHHHHHcCCCchhCcCHHHHHHHHH
Confidence 3445566666666666676 888877665444
No 107
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=5.6e-34 Score=310.06 Aligned_cols=185 Identities=21% Similarity=0.303 Sum_probs=141.2
Q ss_pred hhhcCCCCCCeEeecCCeeEEE---------EEeehhhhh--hhhhhHHHHHHHHHhhcCC-CCceeeEEEEEecCC--c
Q 041467 477 KATNNFSPANKIREGGFNIVYN---------VAMKVANLK--QKEASRSFAAEFNALRNIR-HRNLIKIITICSSID--F 542 (746)
Q Consensus 477 ~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~--~~~~~~~~~~E~~~l~~l~-HpnIv~l~~~~~~~~--~ 542 (746)
...++|+..+.||+|+||.||+ ||||++... .....+++.+|+.+++++. |||||++++++...+ .
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~ 85 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRD 85 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSC
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCE
Confidence 3457899999999999999997 899988533 2344567889999999997 999999999997654 6
Q ss_pred ccchhhhccCCccc----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccC
Q 041467 543 EGFDFKAISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618 (746)
Q Consensus 543 ~~lv~e~~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~ 618 (746)
.|+|||||. |++. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+|+.+..
T Consensus 86 ~~lv~e~~~-~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 161 (388)
T 3oz6_A 86 VYLVFDYME-TDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSRSFVN 161 (388)
T ss_dssp EEEEEECCS-EEHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEESSS
T ss_pred EEEEecccC-cCHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCcccccccc
Confidence 799999997 4554 45789999999999999999999999 999999999999999999999999999987643
Q ss_pred CCCCCC-------------ccccccccccccccccccccccccc-ccccCCCccceeeccceee
Q 041467 619 YEPGTT-------------AETASSSIGINGTVGYVAPVIIAAR-NLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 619 ~~~~~~-------------~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~~~~~DiwSlG~i~~ 668 (746)
...... ..........+||++|+|||++.+. .+ +.++||||+||++|
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~---~~~~DiwSlG~il~ 222 (388)
T 3oz6_A 162 IRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKY---TKGIDMWSLGCILG 222 (388)
T ss_dssp CCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCC---CTHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCC---CChhhHHHHHHHHH
Confidence 211100 0111223457899999999999874 34 44699999999998
No 108
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=1.1e-33 Score=291.36 Aligned_cols=231 Identities=19% Similarity=0.252 Sum_probs=177.6
Q ss_pred hhcCCCCCCeEeecCCeeEEE--------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhh
Q 041467 478 ATNNFSPANKIREGGFNIVYN--------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKA 549 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~--------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~ 549 (746)
..++|+..+.||+|+||.||+ ||||++.... ...+.+.+|++++++++||||+++++++...+..++||||
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (268)
T 3sxs_A 6 KREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS-MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEY 84 (268)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTT-BCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred chhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCC-CcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEc
Confidence 356788999999999999996 8999986443 2345689999999999999999999999999999999999
Q ss_pred ccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCC
Q 041467 550 ISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623 (746)
Q Consensus 550 ~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~ 623 (746)
+++|++. ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 85 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~-- 159 (268)
T 3sxs_A 85 ISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQY-- 159 (268)
T ss_dssp CTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCE--
T ss_pred cCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecchhhh--
Confidence 9999886 34589999999999999999999999 999999999999999999999999999987533211
Q ss_pred CcccccccccccccccccccccccccccccCCCccceeeccceeecccc-cc-cc----------chhhc-cccCCCccH
Q 041467 624 TAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ-NK----------SILKS-AGIKGKKTV 690 (746)
Q Consensus 624 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~-~~----------~i~~~-~~~~~~~~~ 690 (746)
.......||+.|+|||++.+..++.+ +||||+||++|.... .. .. .+... .........
T Consensus 160 -----~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (268)
T 3sxs_A 160 -----VSSVGTKFPVKWSAPEVFHYFKYSSK---SDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPHLAS 231 (268)
T ss_dssp -----EECCSCCCCGGGCCHHHHHHSEEETT---HHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTSC
T ss_pred -----hcccCCCcCcccCCHHHHhccCCchh---hhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcCCCCCCCCcCh
Confidence 12234567888999999988777655 999999999983221 11 00 01111 111122234
Q ss_pred HHHHHhhCCCCCCCCC-CCCccchhhhcccCCC
Q 041467 691 SFFLSLLSPSCSVFPL-TPSSNSFTLLGLRLPS 722 (746)
Q Consensus 691 ~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~~~ 722 (746)
+.+..++..|+...|. ||+..++...++.+-.
T Consensus 232 ~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (268)
T 3sxs_A 232 DTIYQIMYSCWHELPEKRPTFQQLLSSIEPLRE 264 (268)
T ss_dssp HHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhh
Confidence 4555666666666666 8888877766665543
No 109
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.5e-34 Score=306.04 Aligned_cols=177 Identities=22% Similarity=0.332 Sum_probs=151.7
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhh--------hhhHHHHHHHHHhhcCCCCceeeEEEEEecC
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQK--------EASRSFAAEFNALRNIRHRNLIKIITICSSI 540 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~--------~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~ 540 (746)
..++|+..+.||+|+||.||+ ||||++..... ...+.+.+|++++++++|||||++++++.+.
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 456899999999999999997 89998865421 1234578899999999999999999999999
Q ss_pred CcccchhhhccCC-ccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccc
Q 041467 541 DFEGFDFKAISNG-QLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614 (746)
Q Consensus 541 ~~~~lv~e~~~~g-~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~ 614 (746)
+..++||||+..| ++. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~ 178 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFGSAA 178 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCE
T ss_pred CEEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeecccce
Confidence 9999999999777 664 44689999999999999999999999 99999999999999999999999999998
Q ss_pred cccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 615 FLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
...... .....+||+.|+|||++.+..+. +.++||||+||++|
T Consensus 179 ~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~--~~~~DiwslG~il~ 221 (335)
T 3dls_A 179 YLERGK---------LFYTFCGTIEYCAPEVLMGNPYR--GPELEMWSLGVTLY 221 (335)
T ss_dssp ECCTTC---------CBCEECSCGGGCCHHHHTTCCBC--SHHHHHHHHHHHHH
T ss_pred ECCCCC---------ceeccCCCccccChhhhcCCCCC--CCcccchhHHHHHH
Confidence 763321 12346799999999999887662 33599999999998
No 110
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=1.1e-33 Score=299.90 Aligned_cols=175 Identities=22% Similarity=0.263 Sum_probs=152.0
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhhh------hhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcc
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQK------EASRSFAAEFNALRNIRHRNLIKIITICSSIDFE 543 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~------~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~ 543 (746)
.+.|+..+.||+|+||.||+ ||||++..... ...+.+.+|++++++++|||||++++++.+.+..
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 45688999999999999997 89998864422 1356799999999999999999999999999999
Q ss_pred cchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCC----cEEEccccccc
Q 041467 544 GFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDV----VTHVGDLGLAK 614 (746)
Q Consensus 544 ~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~----~~ki~DfGla~ 614 (746)
++||||+++|+|. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||+++
T Consensus 90 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~ 166 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166 (326)
T ss_dssp EEEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred EEEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEECCCCe
Confidence 9999999999986 45689999999999999999999999 999999999999998877 89999999998
Q ss_pred cccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 615 FLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
...... ......||+.|+|||++.+..++. ++||||+||++|
T Consensus 167 ~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~---~~DiwslG~il~ 208 (326)
T 2y0a_A 167 KIDFGN---------EFKNIFGTPEFVAPEIVNYEPLGL---EADMWSIGVITY 208 (326)
T ss_dssp ECCTTS---------CCCCCCSCTTTCCHHHHTTCCCCT---HHHHHHHHHHHH
T ss_pred ECCCCC---------ccccccCCcCcCCceeecCCCCCc---HHHHHHHHHHHH
Confidence 763221 123367999999999998777654 599999999998
No 111
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=6.9e-34 Score=302.37 Aligned_cols=185 Identities=25% Similarity=0.395 Sum_probs=148.4
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCC------
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSID------ 541 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~------ 541 (746)
..++|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++|||||+++++|.+..
T Consensus 4 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~ 83 (332)
T 3qd2_B 4 YLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQE 83 (332)
T ss_dssp HHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHH
T ss_pred hhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhh
Confidence 456789999999999999996 8999986433 334567999999999999999999999986543
Q ss_pred ---------------------------------------------------cccchhhhccCCccc--------ccCCCH
Q 041467 542 ---------------------------------------------------FEGFDFKAISNGQLR--------LCNLSL 562 (746)
Q Consensus 542 ---------------------------------------------------~~~lv~e~~~~g~l~--------~~~l~~ 562 (746)
..++||||+++|++. ....++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~ 163 (332)
T 3qd2_B 84 EMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREH 163 (332)
T ss_dssp HHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCH
T ss_pred hhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhh
Confidence 278999999999986 234566
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCc----ccccccccccccc
Q 041467 563 TQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTA----ETASSSIGINGTV 638 (746)
Q Consensus 563 ~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~----~~~~~~~~~~gt~ 638 (746)
..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++........... .........+||+
T Consensus 164 ~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 240 (332)
T 3qd2_B 164 GVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTK 240 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CG
T ss_pred HHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCc
Confidence 77999999999999999999 9999999999999999999999999999887543221100 0011233467999
Q ss_pred cccccccccccccccCCCccceeeccceee
Q 041467 639 GYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 639 ~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.|+|||++.+..++. ++||||+||++|
T Consensus 241 ~y~aPE~~~~~~~~~---~~Di~slG~il~ 267 (332)
T 3qd2_B 241 LYMSPEQIHGNNYSH---KVDIFSLGLILF 267 (332)
T ss_dssp GGSCHHHHHCCCCCT---HHHHHHHHHHHH
T ss_pred CccChHHhcCCCCcc---hhhHHHHHHHHH
Confidence 999999998877655 599999999998
No 112
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=2.4e-33 Score=294.91 Aligned_cols=190 Identities=31% Similarity=0.471 Sum_probs=161.1
Q ss_pred cCCcccHHHHhhhhcCCCCC------CeEeecCCeeEEE-------EEeehhhhh----hhhhhHHHHHHHHHhhcCCCC
Q 041467 466 QFPMISHAELSKATNNFSPA------NKIREGGFNIVYN-------VAMKVANLK----QKEASRSFAAEFNALRNIRHR 528 (746)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~~~------~~ig~g~~g~v~~-------vavK~~~~~----~~~~~~~~~~E~~~l~~l~Hp 528 (746)
....++..++..++.+|... +.||+|+||.||+ ||||++... .....+.+.+|++++++++||
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~ 90 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHE 90 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEESSSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCT
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEECCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCC
Confidence 34567888999999888776 9999999999997 899987542 233456799999999999999
Q ss_pred ceeeEEEEEecCCcccchhhhccCCccc--------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeC
Q 041467 529 NLIKIITICSSIDFEGFDFKAISNGQLR--------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLD 600 (746)
Q Consensus 529 nIv~l~~~~~~~~~~~lv~e~~~~g~l~--------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~ 600 (746)
||+++++++.+.+..++||||+++|++. ...+++..+..++.|++.||+|||+. +|+||||||+||+++
T Consensus 91 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nili~ 167 (307)
T 2nru_A 91 NLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLD 167 (307)
T ss_dssp TBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEC
T ss_pred CeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEc
Confidence 9999999999999999999999999885 23589999999999999999999999 999999999999999
Q ss_pred CCCcEEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 601 QDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 601 ~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.++.+||+|||+++....... ........||+.|+|||++.+. + +.++||||+||++|
T Consensus 168 ~~~~~kl~Dfg~~~~~~~~~~------~~~~~~~~g~~~y~aPE~~~~~-~---~~~~Dv~slG~il~ 225 (307)
T 2nru_A 168 EAFTAKISDFGLARASEKFAQ------TVMTSRIVGTTAYMAPEALRGE-I---TPKSDIYSFGVVLL 225 (307)
T ss_dssp TTCCEEECCCTTCEECCSCSS------CEECSSCCSCGGGCCHHHHTTE-E---CTHHHHHHHHHHHH
T ss_pred CCCcEEEeecccccccccccc------cccccccCCCcCcCChHHhcCC-C---CccchhHHHHHHHH
Confidence 999999999999987543221 1112336799999999998754 4 44699999999998
No 113
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=1.7e-33 Score=315.37 Aligned_cols=176 Identities=22% Similarity=0.318 Sum_probs=153.7
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccch
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
.++|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++|||||++++++.+.+..|+|
T Consensus 184 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 263 (543)
T 3c4z_A 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLV 263 (543)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEE
Confidence 46788999999999999996 8999986543 23456789999999999999999999999999999999
Q ss_pred hhhccCCccc---------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccccccccc
Q 041467 547 FKAISNGQLR---------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617 (746)
Q Consensus 547 ~e~~~~g~l~---------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~ 617 (746)
|||+++|+|. ...+++..+..++.||+.||+|||++ +|+||||||+|||++.+|.+||+|||+++.+.
T Consensus 264 mE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~ 340 (543)
T 3c4z_A 264 MTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340 (543)
T ss_dssp ECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecceeeecc
Confidence 9999999985 23589999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 618 GYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.... .....+||+.|||||++.+..++. ++||||+||++|
T Consensus 341 ~~~~--------~~~~~~GT~~Y~APE~l~~~~~~~---~~DiwSlGvily 380 (543)
T 3c4z_A 341 AGQT--------KTKGYAGTPGFMAPELLLGEEYDF---SVDYFALGVTLY 380 (543)
T ss_dssp TTCC--------CBCCCCSCTTTSCHHHHTTCCBCT---HHHHHHHHHHHH
T ss_pred CCCc--------ccccccCCccccChhhhcCCCCCh---HHhcCcchHHHH
Confidence 3211 123468999999999999877754 599999999999
No 114
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=8.5e-34 Score=312.74 Aligned_cols=184 Identities=23% Similarity=0.283 Sum_probs=146.8
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhh--hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecC-----C
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLK--QKEASRSFAAEFNALRNIRHRNLIKIITICSSI-----D 541 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~-----~ 541 (746)
..++|+..+.||+|+||.||+ ||||++... .....+++.+|++++++++|||||++++++... .
T Consensus 24 i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~ 103 (432)
T 3n9x_A 24 VPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFD 103 (432)
T ss_dssp CCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCC
T ss_pred ecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCC
Confidence 357899999999999999997 899998643 234456799999999999999999999999876 4
Q ss_pred cccchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccc
Q 041467 542 FEGFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFL 616 (746)
Q Consensus 542 ~~~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~ 616 (746)
..|+||||+. |+|. ...+++.++..++.||++||+|||+. +|+||||||+|||++.++.+||+|||+|+..
T Consensus 104 ~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla~~~ 179 (432)
T 3n9x_A 104 ELYIVLEIAD-SDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLARTI 179 (432)
T ss_dssp CEEEEEECCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred eEEEEEecCC-cCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCcccc
Confidence 6899999986 4664 34689999999999999999999999 9999999999999999999999999999876
Q ss_pred cCCCCCCC--------------ccccccccccccccccccccccccc-ccccCCCccceeeccceee
Q 041467 617 YGYEPGTT--------------AETASSSIGINGTVGYVAPVIIAAR-NLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 617 ~~~~~~~~--------------~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~~~~~DiwSlG~i~~ 668 (746)
........ ..........+||++|+|||++... .+ +.++||||+||++|
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~---~~~~DiwSlG~il~ 243 (432)
T 3n9x_A 180 NSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENY---TKSIDIWSTGCIFA 243 (432)
T ss_dssp -------------------------------CCCCCTTCCHHHHTTCSCC---CTHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCC---CcccccchHHHHHH
Confidence 43321100 0001223568899999999997544 34 44699999999998
No 115
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=99.98 E-value=3.5e-34 Score=308.94 Aligned_cols=229 Identities=17% Similarity=0.198 Sum_probs=173.3
Q ss_pred hcCCCCCCeEeecCCeeEEE--------------EEeehhhhh-hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcc
Q 041467 479 TNNFSPANKIREGGFNIVYN--------------VAMKVANLK-QKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFE 543 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~--------------vavK~~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~ 543 (746)
.++|+..+.||+|+||.||+ ||||++... .......+.+|+.++++++|||||++++++......
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~ 149 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 149 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 45788899999999999995 899988543 234455789999999999999999999999999999
Q ss_pred cchhhhccCCccc------------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCC---cEEEc
Q 041467 544 GFDFKAISNGQLR------------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDV---VTHVG 608 (746)
Q Consensus 544 ~lv~e~~~~g~l~------------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~---~~ki~ 608 (746)
++||||+++|+|. ...+++.++..++.||+.||+|||++ +|+||||||+|||++.++ .+||+
T Consensus 150 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kL~ 226 (367)
T 3l9p_A 150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIG 226 (367)
T ss_dssp EEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEEEC
Confidence 9999999999985 13589999999999999999999999 999999999999999554 59999
Q ss_pred cccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-cc-------ccc---
Q 041467 609 DLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ-------NKS--- 677 (746)
Q Consensus 609 DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~-------~~~--- 677 (746)
|||+|+.+...... .......||+.|+|||++.+..++.+ +|||||||++|.... .. ...
T Consensus 227 DFG~a~~~~~~~~~------~~~~~~~~t~~y~aPE~~~~~~~~~~---~DvwslG~il~ellt~g~~pf~~~~~~~~~~ 297 (367)
T 3l9p_A 227 DFGMARDIYRAGYY------RKGGCAMLPVKWMPPEAFMEGIFTSK---TDTWSFGVLLWEIFSLGYMPYPSKSNQEVLE 297 (367)
T ss_dssp CCHHHHHHHHHSSC------TTCCGGGSCGGGCCHHHHHHCCCCHH---HHHHHHHHHHHHHHTTSCCSSTTCCHHHHHH
T ss_pred CCcccccccccccc------ccCCCcCCcccEECHHHhcCCCCCcH---HHHHHHHHHHHHHHhCCCCCCCCCCHHHHHH
Confidence 99999865332211 11223568999999999988877655 999999999983221 10 001
Q ss_pred -hhh-ccccCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhccc
Q 041467 678 -ILK-SAGIKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLR 719 (746)
Q Consensus 678 -i~~-~~~~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~ 719 (746)
+.. ....+.....+.+..++..|+...|. ||+..++...++.
T Consensus 298 ~i~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~ 342 (367)
T 3l9p_A 298 FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEY 342 (367)
T ss_dssp HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred HHHcCCCCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHH
Confidence 111 11122234445555666666666666 8888866655443
No 116
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=99.98 E-value=1.5e-33 Score=316.47 Aligned_cols=176 Identities=24% Similarity=0.322 Sum_probs=153.6
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccc
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~l 545 (746)
..++|+..+.||+|+||.||+ ||||++.... ......+.+|++++++++|||||++++++.+.+..++
T Consensus 182 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~l 261 (576)
T 2acx_A 182 TKNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCL 261 (576)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEE
T ss_pred cccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEE
Confidence 346789999999999999997 8999986542 2345668899999999999999999999999999999
Q ss_pred hhhhccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccC
Q 041467 546 DFKAISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618 (746)
Q Consensus 546 v~e~~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~ 618 (746)
||||+++|+|. ...+++.++..++.||+.||+|||++ +|+||||||+|||++.+|.+||+|||+|+.+..
T Consensus 262 VmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~ 338 (576)
T 2acx_A 262 VLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPE 338 (576)
T ss_dssp EECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceeccc
Confidence 99999999985 22489999999999999999999999 999999999999999999999999999987632
Q ss_pred CCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 619 YEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 619 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
. ......+||+.|+|||++.+..++. ++||||+||++|
T Consensus 339 ~---------~~~~~~~GT~~Y~APEvl~~~~~~~---~~DiwSLGvily 376 (576)
T 2acx_A 339 G---------QTIKGRVGTVGYMAPEVVKNERYTF---SPDWWALGCLLY 376 (576)
T ss_dssp T---------CCEECCCSCGGGCCHHHHTTCEESS---HHHHHHHHHHHH
T ss_pred C---------ccccccCCCccccCHHHHcCCCCCc---cchHHHHHHHHH
Confidence 2 1123468999999999998877654 599999999999
No 117
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.98 E-value=3.7e-34 Score=300.40 Aligned_cols=235 Identities=18% Similarity=0.192 Sum_probs=165.3
Q ss_pred hcCCCCCCeEeecCCeeEEE-------EEeehhhhhhhhhhHHHHHHHHHhhc--CCCCceeeEEEEEecCC----cccc
Q 041467 479 TNNFSPANKIREGGFNIVYN-------VAMKVANLKQKEASRSFAAEFNALRN--IRHRNLIKIITICSSID----FEGF 545 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~-------vavK~~~~~~~~~~~~~~~E~~~l~~--l~HpnIv~l~~~~~~~~----~~~l 545 (746)
.++|+..+.||+|+||.||+ ||||++... ..+.+.+|.+++.. ++||||+++++++.... ..++
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l 78 (303)
T 3gxj_A 2 ARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL 78 (303)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CTTSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEE
T ss_pred cceeeehhhccCCCCeEEEEEEEcCcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEE
Confidence 35799999999999999998 999998633 34567778888877 79999999999998876 6799
Q ss_pred hhhhccCCccc----ccCCCHHHHHHHHHHHHHHHHHHH--------hcCCCCeEEcCCCCCCeeeCCCCcEEEcccccc
Q 041467 546 DFKAISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLR--------HHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLA 613 (746)
Q Consensus 546 v~e~~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH--------~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla 613 (746)
||||+++|+|. ...+++.++..++.|++.|++||| +. +|+||||||+||+++.++.+||+|||+|
T Consensus 79 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~~~kl~DFg~a 155 (303)
T 3gxj_A 79 VSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCCIADLGLA 155 (303)
T ss_dssp EEECCTTCCHHHHHHHCCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-BCCCCC-
T ss_pred EEeccCCCCHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCCCEEEeecCcc
Confidence 99999999986 457889999999999999999999 66 9999999999999999999999999999
Q ss_pred ccccCCCCCCCcccccccccccccccccccccccccccc---cCCCccceeeccceeeccccc----------cc-----
Q 041467 614 KFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLE---NREKRHTVMSFPQRFALNEKK----------QN----- 675 (746)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~---~~~~~~DiwSlG~i~~~~~~~----------~~----- 675 (746)
+........ .........||+.|+|||++.+.... .++.++|||||||++|..... +.
T Consensus 156 ~~~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~ 231 (303)
T 3gxj_A 156 VRHDSATDT----IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDL 231 (303)
T ss_dssp CCEETTTTE----ESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTT
T ss_pred eeccCCCcc----cccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeecccccc
Confidence 776433221 11112335799999999999876322 113459999999999933221 00
Q ss_pred -------cchhh----c--cccCC-----CccHHHHHHhhCCCCCCCCC-CCCccchhhhcccCCCC
Q 041467 676 -------KSILK----S--AGIKG-----KKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLRLPSR 723 (746)
Q Consensus 676 -------~~i~~----~--~~~~~-----~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~~~~ 723 (746)
..+.. . .+... ....+.+..++..|+...|. ||+..++...++.+...
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l~~~ 298 (303)
T 3gxj_A 232 VPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQLSQQ 298 (303)
T ss_dssp CC-CCCCC-CHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-CCC
T ss_pred CCCCccHHHHHHHHHHhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHhhhh
Confidence 00000 0 01111 12334678888888888888 99999888777766543
No 118
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=99.98 E-value=6.9e-34 Score=304.04 Aligned_cols=238 Identities=21% Similarity=0.271 Sum_probs=181.4
Q ss_pred HhhhhcCCCCCCeEeecCCeeEEE--------------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEec
Q 041467 475 LSKATNNFSPANKIREGGFNIVYN--------------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSS 539 (746)
Q Consensus 475 ~~~~~~~~~~~~~ig~g~~g~v~~--------------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~ 539 (746)
+....++|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++||||+++++++.+
T Consensus 42 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~ 121 (343)
T 1luf_A 42 LEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAV 121 (343)
T ss_dssp TBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred eEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc
Confidence 344567899999999999999996 7899886542 3345679999999999999999999999999
Q ss_pred CCcccchhhhccCCccc----c-------------------------cCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEc
Q 041467 540 IDFEGFDFKAISNGQLR----L-------------------------CNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHG 590 (746)
Q Consensus 540 ~~~~~lv~e~~~~g~l~----~-------------------------~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHr 590 (746)
.+..++||||+++|+|. . ..+++.++..++.||+.||+|||++ +|+||
T Consensus 122 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH~ 198 (343)
T 1luf_A 122 GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHR 198 (343)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCS
T ss_pred CCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecC
Confidence 99999999999999885 1 4689999999999999999999999 99999
Q ss_pred CCCCCCeeeCCCCcEEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecc
Q 041467 591 DLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALN 670 (746)
Q Consensus 591 Dlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~ 670 (746)
||||+||+++.++.+||+|||+++....... ........||+.|+|||++.+..++.+ +|||||||++|..
T Consensus 199 Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~------~~~~~~~~~t~~y~aPE~~~~~~~~~~---~Di~slG~il~el 269 (343)
T 1luf_A 199 DLATRNCLVGENMVVKIADFGLSRNIYSADY------YKADGNDAIPIRWMPPESIFYNRYTTE---SDVWAYGVVLWEI 269 (343)
T ss_dssp CCSGGGEEECGGGCEEECCCSCHHHHTGGGC------BC----CCBCGGGCCHHHHHHCCCCHH---HHHHHHHHHHHHH
T ss_pred CCCcceEEECCCCeEEEeecCCCcccccCcc------ccccCCCcccceecChhhhccCCcCcc---cccHHHHHHHHHH
Confidence 9999999999999999999999987633211 111223568999999999988776554 9999999999832
Q ss_pred cc-cc-c------cch----hh-ccccCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhcccCCCCC
Q 041467 671 EK-KQ-N------KSI----LK-SAGIKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLRLPSRS 724 (746)
Q Consensus 671 ~~-~~-~------~~i----~~-~~~~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~~~~~ 724 (746)
.. .. . ..+ .. ..........+.+..++..|+...|. ||+..++...++++....
T Consensus 270 ~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~~~~ 337 (343)
T 1luf_A 270 FSYGLQPYYGMAHEEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMCERA 337 (343)
T ss_dssp HTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC--
T ss_pred HhcCCCcCCCCChHHHHHHHhCCCcCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHHhhh
Confidence 21 11 0 011 11 11112233445556666666666676 888888887777766544
No 119
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=99.98 E-value=6.2e-34 Score=306.11 Aligned_cols=176 Identities=20% Similarity=0.260 Sum_probs=144.4
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhh
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFK 548 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e 548 (746)
..++|+..+.||+|+||.||+ ||||++.... ...+.+.+|+.+++.++|||||++++++.+.+..++|||
T Consensus 18 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 96 (361)
T 3uc3_A 18 DSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGA-AIDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIME 96 (361)
T ss_dssp CTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESST-TSCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCc-cccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEE
Confidence 456899999999999999996 8999986432 234568899999999999999999999999999999999
Q ss_pred hccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCc--EEEccccccccccCCCC
Q 041467 549 AISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVV--THVGDLGLAKFLYGYEP 621 (746)
Q Consensus 549 ~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~--~ki~DfGla~~~~~~~~ 621 (746)
|+++|+|. ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++. +||+|||+|+.....
T Consensus 97 ~~~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~-- 171 (361)
T 3uc3_A 97 YASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLH-- 171 (361)
T ss_dssp CCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC--------
T ss_pred eCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCcccccccc--
Confidence 99999986 45799999999999999999999999 9999999999999987665 999999999753211
Q ss_pred CCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......+||+.|+|||++.+..++.+ ++||||+||++|
T Consensus 172 -------~~~~~~~gt~~y~aPE~~~~~~~~~~--~~DiwslG~il~ 209 (361)
T 3uc3_A 172 -------SQPKSTVGTPAYIAPEVLLRQEYDGK--IADVWSCGVTLY 209 (361)
T ss_dssp ----------------CTTSCHHHHHCSSCCHH--HHHHHHHHHHHH
T ss_pred -------CCCCCCcCCCCcCChhhhcCCCCCCC--eeeeehhHHHHH
Confidence 11234679999999999988776433 589999999998
No 120
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.98 E-value=6e-34 Score=293.53 Aligned_cols=176 Identities=21% Similarity=0.357 Sum_probs=151.9
Q ss_pred hcCCCCCCeEeecCCeeEEE--------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhc
Q 041467 479 TNNFSPANKIREGGFNIVYN--------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAI 550 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~--------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~ 550 (746)
.++|+..+.||+|+||.||+ ||||++.... ...+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA-MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM 87 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhhceeeheecCCCccEEEEEEecCCCeEEEEEecccc-cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeC
Confidence 46788999999999999997 8999986442 23457999999999999999999999999999999999999
Q ss_pred cCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCC
Q 041467 551 SNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTT 624 (746)
Q Consensus 551 ~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~ 624 (746)
++|++. ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 88 ~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~----- 159 (269)
T 4hcu_A 88 EHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD----- 159 (269)
T ss_dssp TTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCH-----
T ss_pred CCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEecccccccccccc-----
Confidence 999886 34589999999999999999999999 9999999999999999999999999999865321
Q ss_pred cccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 625 AETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 625 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.........||+.|+|||++.+..++.+ +||||+||++|
T Consensus 160 --~~~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~~l~ 198 (269)
T 4hcu_A 160 --QYTSSTGTKFPVKWASPEVFSFSRYSSK---SDVWSFGVLMW 198 (269)
T ss_dssp --HHHSTTSTTCCGGGCCHHHHHHCCCCHH---HHHHHHHHHHH
T ss_pred --ccccccCcccccccCCHHHhcCCCCCch---hhhHHHHHHHH
Confidence 1122334567889999999988777655 99999999998
No 121
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=99.98 E-value=2.1e-33 Score=291.19 Aligned_cols=175 Identities=20% Similarity=0.315 Sum_probs=150.2
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccc
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~l 545 (746)
..++|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 86 (279)
T 3fdn_A 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYL 86 (279)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEE
Confidence 457899999999999999996 8999885432 2335678999999999999999999999999999999
Q ss_pred hhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCC
Q 041467 546 DFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620 (746)
Q Consensus 546 v~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~ 620 (746)
||||+++|++. ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 87 v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~- 162 (279)
T 3fdn_A 87 ILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS- 162 (279)
T ss_dssp EECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC----
T ss_pred EEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccCCcc-
Confidence 99999999885 45789999999999999999999999 9999999999999999999999999998654221
Q ss_pred CCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 621 PGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 621 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......||+.|+|||++.+..++.+ +||||+||++|
T Consensus 163 ---------~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~il~ 198 (279)
T 3fdn_A 163 ---------RRTDLCGTLDYLPPEMIEGRMHDEK---VDLWSLGVLCY 198 (279)
T ss_dssp --------------CCCCTTCCHHHHTTCCCCTT---HHHHHHHHHHH
T ss_pred ---------cccccCCCCCccCHhHhccCCCCcc---chhHhHHHHHH
Confidence 1223678999999999988776554 99999999998
No 122
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=99.98 E-value=9.2e-34 Score=314.54 Aligned_cols=234 Identities=17% Similarity=0.245 Sum_probs=180.9
Q ss_pred HhhhhcCCCCCCeEeecCCeeEEE--------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccch
Q 041467 475 LSKATNNFSPANKIREGGFNIVYN--------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 475 ~~~~~~~~~~~~~ig~g~~g~v~~--------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
+....++|+..+.||+|+||.||+ ||||+++... ...+.|.+|+++|++++|||||++++++. .+..++|
T Consensus 183 ~~i~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv 260 (454)
T 1qcf_A 183 WEIPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYII 260 (454)
T ss_dssp SBCCGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEE
T ss_pred eeechHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEE
Confidence 344567888999999999999997 9999986543 34678999999999999999999999986 5678999
Q ss_pred hhhccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCC
Q 041467 547 FKAISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGY 619 (746)
Q Consensus 547 ~e~~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~ 619 (746)
|||+++|+|. ...+++.++..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.....
T Consensus 261 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~ 337 (454)
T 1qcf_A 261 TEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDN 337 (454)
T ss_dssp ECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCH
T ss_pred EeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcCCC
Confidence 9999999986 23688999999999999999999999 9999999999999999999999999999876321
Q ss_pred CCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-cc-c------cc----hhhc-cccCC
Q 041467 620 EPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ-N------KS----ILKS-AGIKG 686 (746)
Q Consensus 620 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~-~------~~----i~~~-~~~~~ 686 (746)
. ........+|..|+|||++....++.+ +|||||||++|.... .. . .. +... .....
T Consensus 338 ~-------~~~~~~~~~~~~y~aPE~~~~~~~~~~---~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~ 407 (454)
T 1qcf_A 338 E-------YTAREGAKFPIKWTAPEAINFGSFTIK---SDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRP 407 (454)
T ss_dssp H-------HHTTCSSSSCGGGSCHHHHHHCCCCHH---HHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCCCCCC
T ss_pred c-------eeccCCCcccccccCHHHhccCCCCcH---HHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCC
Confidence 1 111223456889999999987777554 999999999982221 11 0 01 1111 11122
Q ss_pred CccHHHHHHhhCCCCCCCCC-CCCccchhhhcccCCCC
Q 041467 687 KKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLRLPSR 723 (746)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~~~~ 723 (746)
..+.+.+..++..|+...|. ||++.++...++.+...
T Consensus 408 ~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~ 445 (454)
T 1qcf_A 408 ENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTA 445 (454)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSS
T ss_pred CCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhc
Confidence 34456667777777777777 99999888777766543
No 123
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=99.98 E-value=1.4e-33 Score=301.61 Aligned_cols=174 Identities=23% Similarity=0.287 Sum_probs=148.0
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhh---hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccch
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLK---QKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
...|+..+.||+|+||.||+ ||||++... .....+.+.+|++++++++|||||++++++...+..++|
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 132 (348)
T 1u5q_A 53 EKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLV 132 (348)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEE
Confidence 34588899999999999996 899998643 233456789999999999999999999999999999999
Q ss_pred hhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCC
Q 041467 547 FKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620 (746)
Q Consensus 547 ~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~ 620 (746)
|||+.+ ++. ...+++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 133 ~e~~~g-~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~-- 206 (348)
T 1u5q_A 133 MEYCLG-SASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP-- 206 (348)
T ss_dssp EECCSE-EHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS--
T ss_pred EecCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecCC--
Confidence 999974 442 45789999999999999999999999 999999999999999999999999999976522
Q ss_pred CCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 621 PGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 621 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
....+||+.|+|||++.+.....++.++|||||||++|
T Consensus 207 ----------~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ 244 (348)
T 1u5q_A 207 ----------ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCI 244 (348)
T ss_dssp ----------BCCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHH
T ss_pred ----------CCcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHH
Confidence 12367999999999996432233455699999999998
No 124
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=99.98 E-value=8e-34 Score=301.37 Aligned_cols=227 Identities=19% Similarity=0.207 Sum_probs=167.8
Q ss_pred hcCCCCCCeEeecCCeeEEE-------------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCccc
Q 041467 479 TNNFSPANKIREGGFNIVYN-------------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEG 544 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~-------------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~ 544 (746)
.++|+..+.||+|+||.||+ ||+|.+.... ....+.+.+|++++++++|||||+++++|.... .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~ 92 (327)
T 3poz_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EE
T ss_pred HHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eE
Confidence 35788999999999999996 4788775432 344578999999999999999999999998754 77
Q ss_pred chhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccC
Q 041467 545 FDFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618 (746)
Q Consensus 545 lv~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~ 618 (746)
+++||+.+|++. ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+|+....
T Consensus 93 ~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~ 169 (327)
T 3poz_A 93 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169 (327)
T ss_dssp EEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHHHHTT
T ss_pred EEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCcceeEccC
Confidence 899999999985 35689999999999999999999999 999999999999999999999999999987643
Q ss_pred CCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-cc----------ccchhhc--cccC
Q 041467 619 YEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ----------NKSILKS--AGIK 685 (746)
Q Consensus 619 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~----------~~~i~~~--~~~~ 685 (746)
.... .......||..|+|||++.+..++.+ +|||||||++|.... .. ...+... ....
T Consensus 170 ~~~~------~~~~~~~~t~~y~aPE~~~~~~~~~~---~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~ 240 (327)
T 3poz_A 170 EEKE------YHAEGGKVPIKWMALESILHRIYTHQ---SDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 240 (327)
T ss_dssp TCC-------------CCCGGGSCHHHHHHCCCCHH---HHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCC
T ss_pred Cccc------ccccCCCccccccChHHhccCCCCch---hhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHcCCCCCC
Confidence 3221 12233567889999999998877655 999999999983221 11 0111111 1112
Q ss_pred CCccHHHHHHhhCCCCCCCCC-CCCccchhhhcc
Q 041467 686 GKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGL 718 (746)
Q Consensus 686 ~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~ 718 (746)
.......+..++..|+...|. ||++.++...+.
T Consensus 241 ~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~ 274 (327)
T 3poz_A 241 PPICTIDVYMIMVKCWMIDADSRPKFRELIIEFS 274 (327)
T ss_dssp CTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHH
T ss_pred CccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHH
Confidence 223444555566666666666 888886654443
No 125
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=99.98 E-value=1.3e-33 Score=292.08 Aligned_cols=175 Identities=26% Similarity=0.350 Sum_probs=130.2
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhh---hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccch
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLK---QKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
.++|+..+.||+|+||.||+ ||+|++... .....+.+.+|+++++.++||||+++++++.+.+..++|
T Consensus 12 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (275)
T 2eue_A 12 IGNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMV 91 (275)
T ss_dssp CCCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEE
T ss_pred ccceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEE
Confidence 46899999999999999996 899998643 233456789999999999999999999999999999999
Q ss_pred hhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCC
Q 041467 547 FKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 547 ~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~ 621 (746)
|||+. |++. ...+++.++..++.|++.|++|||+. +|+||||||+||++++++.+||+|||+++......
T Consensus 92 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 166 (275)
T 2eue_A 92 IEYAG-NELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN- 166 (275)
T ss_dssp EECCC-EEHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSSCC--------
T ss_pred ehhcC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecccceeccCcc-
Confidence 99994 4443 45689999999999999999999999 99999999999999999999999999998653221
Q ss_pred CCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......||+.|+|||++.+..+. +.++||||+||++|
T Consensus 167 --------~~~~~~~t~~y~aPE~~~~~~~~--~~~~Di~slG~il~ 203 (275)
T 2eue_A 167 --------FLKTSCGSPNYAAPEVISGKLYA--GPEVDVWSCGVILY 203 (275)
T ss_dssp ----------------CTTCCHHHHCC-------THHHHHHHHHHHH
T ss_pred --------cccCCCCCcCcCCceeeeCCCCC--CcccchHHHHHHHH
Confidence 12235789999999999877653 33699999999998
No 126
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=99.98 E-value=9.8e-34 Score=298.53 Aligned_cols=179 Identities=18% Similarity=0.280 Sum_probs=145.3
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcc---
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFE--- 543 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~--- 543 (746)
.++|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++|||||++++++......
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 46799999999999999996 8999986542 33456789999999999999999999998876654
Q ss_pred -cchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccccccccc
Q 041467 544 -GFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617 (746)
Q Consensus 544 -~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~ 617 (746)
++||||+++|+|. ...+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+++.+.
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~ 167 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIA 167 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC----
T ss_pred cEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCccccc
Confidence 9999999999986 45689999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 618 GYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
..... ........||+.|+|||++.+..++.+ +||||+||++|
T Consensus 168 ~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~~~~---~Di~slG~~l~ 210 (311)
T 3ork_A 168 DSGNS-----VTQTAAVIGTAQYLSPEQARGDSVDAR---SDVYSLGCVLY 210 (311)
T ss_dssp -------------------CCTTCCHHHHHTCCCCHH---HHHHHHHHHHH
T ss_pred ccccc-----cccccccCcCcccCCHHHhcCCCCCch---HhHHHHHHHHH
Confidence 32211 112234679999999999988877554 99999999998
No 127
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=99.98 E-value=8.2e-34 Score=297.54 Aligned_cols=181 Identities=22% Similarity=0.269 Sum_probs=146.2
Q ss_pred hhcCCCCCCeEeecCCeeEEE-------EEeehhhhhhhhhhHHHHHHHHHhhc--CCCCceeeEEEEEecC----Cccc
Q 041467 478 ATNNFSPANKIREGGFNIVYN-------VAMKVANLKQKEASRSFAAEFNALRN--IRHRNLIKIITICSSI----DFEG 544 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~-------vavK~~~~~~~~~~~~~~~E~~~l~~--l~HpnIv~l~~~~~~~----~~~~ 544 (746)
..++|+..+.||+|+||.||+ ||||++... ..+.+.+|.+++.. ++||||+++++++... ...+
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~ 82 (301)
T 3q4u_A 6 VARDITLLECVGKGRYGEVWRGSWQGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW 82 (301)
T ss_dssp CGGGCEEEEEEEECSSEEEEEEEETTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred ccCcEEEEEeeccCCCcEEEEEEECCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence 346899999999999999997 999998643 33445666666665 8999999999987653 3578
Q ss_pred chhhhccCCccc----ccCCCHHHHHHHHHHHHHHHHHHH--------hcCCCCeEEcCCCCCCeeeCCCCcEEEccccc
Q 041467 545 FDFKAISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLR--------HHCQPSIVHGDLKPSNILLDQDVVTHVGDLGL 612 (746)
Q Consensus 545 lv~e~~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH--------~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGl 612 (746)
+||||+++|+|. ...+++..+..++.|++.|++||| +. +|+||||||+||+++.++.+||+|||+
T Consensus 83 lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~ 159 (301)
T 3q4u_A 83 LITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQCCIADLGL 159 (301)
T ss_dssp EEECCCTTCBHHHHHTTCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSCEEECCCTT
T ss_pred EehhhccCCCHHHHHhhcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCCEEEeeCCC
Confidence 999999999986 467899999999999999999999 66 999999999999999999999999999
Q ss_pred cccccCCCCCCCcccccccccccccccccccccccccccc---cCCCccceeeccceee
Q 041467 613 AKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLE---NREKRHTVMSFPQRFA 668 (746)
Q Consensus 613 a~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~---~~~~~~DiwSlG~i~~ 668 (746)
|+........ .........||+.|+|||++.+.... .+++++|||||||++|
T Consensus 160 a~~~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~ 214 (301)
T 3q4u_A 160 AVMHSQSTNQ----LDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLW 214 (301)
T ss_dssp CEEEETTTTE----EECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHH
T ss_pred eeeccccccc----ccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHH
Confidence 9876433221 11112335799999999999876322 1234699999999998
No 128
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=99.98 E-value=7.1e-34 Score=305.97 Aligned_cols=187 Identities=22% Similarity=0.284 Sum_probs=156.2
Q ss_pred ccHHHHhhhhcCCCCCCeEeecCCeeEEE--------------EEeehhhhhh-hhhhHHHHHHHHHhhcC-CCCceeeE
Q 041467 470 ISHAELSKATNNFSPANKIREGGFNIVYN--------------VAMKVANLKQ-KEASRSFAAEFNALRNI-RHRNLIKI 533 (746)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~ig~g~~g~v~~--------------vavK~~~~~~-~~~~~~~~~E~~~l~~l-~HpnIv~l 533 (746)
+...++....++|+..+.||+|+||.||+ ||||++.... ....+.+.+|+++++++ +|||||++
T Consensus 12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~ 91 (359)
T 3vhe_A 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 91 (359)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeee
Confidence 44556667788999999999999999996 7999986542 33456799999999999 79999999
Q ss_pred EEEEecCCc-ccchhhhccCCccc-----cc-------------------------------------------------
Q 041467 534 ITICSSIDF-EGFDFKAISNGQLR-----LC------------------------------------------------- 558 (746)
Q Consensus 534 ~~~~~~~~~-~~lv~e~~~~g~l~-----~~------------------------------------------------- 558 (746)
+++|.+.+. .++||||+++|+|. ..
T Consensus 92 ~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (359)
T 3vhe_A 92 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEK 171 (359)
T ss_dssp EEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC------------------------------------------
T ss_pred eeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccccc
Confidence 999988654 88999999998885 11
Q ss_pred -----------------CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCC
Q 041467 559 -----------------NLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 559 -----------------~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~ 621 (746)
.+++.++..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+|+.......
T Consensus 172 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 248 (359)
T 3vhe_A 172 SLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD 248 (359)
T ss_dssp ------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTT
T ss_pred ccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeeccccc
Confidence 189999999999999999999999 999999999999999999999999999987643221
Q ss_pred CCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
........||+.|+|||++.+..++.+ +|||||||++|
T Consensus 249 ------~~~~~~~~~t~~y~aPE~~~~~~~~~~---~Di~slG~il~ 286 (359)
T 3vhe_A 249 ------YVRKGDARLPLKWMAPETIFDRVYTIQ---SDVWSFGVLLW 286 (359)
T ss_dssp ------CEEC--CEECGGGCCHHHHHHCCCCHH---HHHHHHHHHHH
T ss_pred ------chhccccCCCceeEChhhhcCCCCCch---hhhhhHHHHHH
Confidence 122334678999999999988777654 99999999998
No 129
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.98 E-value=1.4e-32 Score=289.64 Aligned_cols=251 Identities=25% Similarity=0.406 Sum_probs=174.3
Q ss_pred CCcEeeCccCcccc--cCCccccCCCCCCEEEccC-CCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhc
Q 041467 130 SLEMIEFSRNQFSG--GVSVDFSRLKNLSWLNLGV-NNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANL 206 (746)
Q Consensus 130 ~L~~L~Ls~N~l~~--~~~~~~~~l~~L~~L~Ls~-N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 206 (746)
+++.|+|++|.+++ .+|..|+.+++|++|+|++ |.+.+ .+|..|.++++|++|+|++|++++.+|..+..+
T Consensus 51 ~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~L~~~n~l~~------~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l 124 (313)
T 1ogq_A 51 RVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVG------PIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQI 124 (313)
T ss_dssp CEEEEEEECCCCSSCEECCGGGGGCTTCSEEEEEEETTEES------CCCGGGGGCTTCSEEEEEEECCEEECCGGGGGC
T ss_pred eEEEEECCCCCccCCcccChhHhCCCCCCeeeCCCCCcccc------cCChhHhcCCCCCEEECcCCeeCCcCCHHHhCC
Confidence 45555566666655 5555666666666666663 55554 344455556666666666666655566656555
Q ss_pred ccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCC-CCceeeccccccccccccccccc--ChHH
Q 041467 207 SSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETP-NLQLLNIGGNHLQGSILSSLGNL--TLQT 283 (746)
Q Consensus 207 ~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~~~~l~~l--~~l~ 283 (746)
. +|++|++++|++++.+|..|+++++|++|+|++|++.+.+|..++.++ +|++|+|++|++++.+|..+..+ +.++
T Consensus 125 ~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~L~~L~ 203 (313)
T 1ogq_A 125 K-TLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVD 203 (313)
T ss_dssp T-TCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEE
T ss_pred C-CCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCcccEEE
Confidence 5 466666666666655666666666666666666666655666666555 56666666666665555554443 2333
Q ss_pred hhhccCCCCCCccccCCCCCCeeeecCCcCccccchhhhhcccccceEEccCccccccCchhhhcccCCceeecCCCCCC
Q 041467 284 YLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNLKNLLRLHIPEYPEN 363 (746)
Q Consensus 284 ~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~lp~~~~~ 363 (746)
+.+|.+.+.+|..|..+++|+.|+|++|++++.+|. +..+++| ++|++++|++++.+|.++..
T Consensus 204 Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L-~~L~Ls~N~l~~~~p~~l~~--------------- 266 (313)
T 1ogq_A 204 LSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNL-NGLDLRNNRIYGTLPQGLTQ--------------- 266 (313)
T ss_dssp CCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTC-CEEECCSSCCEECCCGGGGG---------------
T ss_pred CcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCC-CEEECcCCcccCcCChHHhc---------------
Confidence 335566667788889999999999999999976665 7788888 68999999999989988765
Q ss_pred CCCCCEEEccCCcCcccCCCCCccCCCCeeeEecCCCcCCC
Q 041467 364 LSFFELLNLSYNYFGSEVPTKGVFNNKTRFSIIGNGKLCGG 404 (746)
Q Consensus 364 l~~L~~L~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~l~~~ 404 (746)
++.|+.|++++|+++|.+|....+..+..+++.+|+++||.
T Consensus 267 l~~L~~L~Ls~N~l~~~ip~~~~l~~L~~l~l~~N~~lc~~ 307 (313)
T 1ogq_A 267 LKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGS 307 (313)
T ss_dssp CTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSSEEEST
T ss_pred CcCCCEEECcCCcccccCCCCccccccChHHhcCCCCccCC
Confidence 45668899999999999998877888899999999999996
No 130
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=99.98 E-value=2.6e-33 Score=291.90 Aligned_cols=175 Identities=21% Similarity=0.332 Sum_probs=145.5
Q ss_pred cCCCCCCeEeecCCeeEEE--------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhh
Q 041467 480 NNFSPANKIREGGFNIVYN--------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKA 549 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~--------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~ 549 (746)
++|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++|||||++++++...+..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 5788999999999999997 8999886432 23346788999999999999999999999999999999999
Q ss_pred ccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCC
Q 041467 550 ISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623 (746)
Q Consensus 550 ~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~ 623 (746)
+.+ ++. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--- 154 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPV--- 154 (288)
T ss_dssp CSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC-----
T ss_pred cCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCccc---
Confidence 975 443 35689999999999999999999999 99999999999999999999999999998753211
Q ss_pred CcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 624 TAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 624 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.......||+.|+|||++.+... ++.++||||+||++|
T Consensus 155 -----~~~~~~~~t~~y~aPE~~~~~~~--~~~~~DiwslG~il~ 192 (288)
T 1ob3_A 155 -----RKYTHEIVTLWYRAPDVLMGSKK--YSTTIDIWSVGCIFA 192 (288)
T ss_dssp ------------CCCTTCCHHHHTTCCS--CCTHHHHHHHHHHHH
T ss_pred -----cccccccccccccCchheeCCCC--CCcHHHHHHHHHHHH
Confidence 11233578999999999976432 244699999999998
No 131
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=99.98 E-value=2.7e-33 Score=290.00 Aligned_cols=175 Identities=21% Similarity=0.216 Sum_probs=153.0
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhh
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFK 548 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e 548 (746)
..++|+..+.||+|+||.||+ ||+|++........+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (277)
T 3f3z_A 7 INQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVME 86 (277)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEe
Confidence 346789999999999999996 79999876655567789999999999999999999999999999999999
Q ss_pred hccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeee---CCCCcEEEccccccccccCCC
Q 041467 549 AISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL---DQDVVTHVGDLGLAKFLYGYE 620 (746)
Q Consensus 549 ~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl---~~~~~~ki~DfGla~~~~~~~ 620 (746)
|+++|++. ...+++.++..++.|++.|++|||+. +|+||||||+||++ +.++.+||+|||++.......
T Consensus 87 ~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~ 163 (277)
T 3f3z_A 87 LCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK 163 (277)
T ss_dssp CCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTS
T ss_pred ccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccceeccCcc
Confidence 99999885 45689999999999999999999999 99999999999999 788999999999998753221
Q ss_pred CCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 621 PGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 621 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......||+.|+|||++.+. + +.++||||+||++|
T Consensus 164 ---------~~~~~~~t~~y~aPE~~~~~-~---~~~~Di~slG~~l~ 198 (277)
T 3f3z_A 164 ---------MMRTKVGTPYYVSPQVLEGL-Y---GPECDEWSAGVMMY 198 (277)
T ss_dssp ---------CBCCCCSCTTTCCHHHHTTC-B---CTTHHHHHHHHHHH
T ss_pred ---------chhccCCCCCccChHHhccc-C---CchhhehhHHHHHH
Confidence 12336799999999998754 4 44599999999998
No 132
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=99.98 E-value=1.7e-33 Score=296.65 Aligned_cols=172 Identities=19% Similarity=0.235 Sum_probs=141.3
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhh--hhhhhHHHHHHHHHhhcC-CCCceeeEEEEEecCCcccchh
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLK--QKEASRSFAAEFNALRNI-RHRNLIKIITICSSIDFEGFDF 547 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~--~~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~~~~~~lv~ 547 (746)
++|+..+.||+|+||+||+ ||||++... .......+.+|+..+.++ +|||||+++++|.+.+..++||
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~ 136 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT 136 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence 5799999999999999997 899987543 223334455666665555 8999999999999999999999
Q ss_pred hhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCC
Q 041467 548 KAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 548 e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~ 621 (746)
||+ +|++. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 137 e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~- 211 (311)
T 3p1a_A 137 ELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAG- 211 (311)
T ss_dssp ECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEECC----
T ss_pred ecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeeecccCC-
Confidence 999 55554 34699999999999999999999999 99999999999999999999999999998753221
Q ss_pred CCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......||+.|+|||++.+ .+ +.++|||||||++|
T Consensus 212 --------~~~~~~gt~~y~aPE~~~~-~~---~~~~DiwslG~il~ 246 (311)
T 3p1a_A 212 --------AGEVQEGDPRYMAPELLQG-SY---GTAADVFSLGLTIL 246 (311)
T ss_dssp -----------CCCCCGGGCCGGGGGT-CC---STHHHHHHHHHHHH
T ss_pred --------CCcccCCCccccCHhHhcC-CC---CchhhHHHHHHHHH
Confidence 1223569999999999876 34 44699999999988
No 133
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=99.98 E-value=7.9e-34 Score=306.29 Aligned_cols=178 Identities=16% Similarity=0.195 Sum_probs=151.6
Q ss_pred hhhhcCCCCCCeEeecCCeeEEE--------------EEeehhhhhhhhhhHHHHHHHHHhhcCC---CCceeeEEEEEe
Q 041467 476 SKATNNFSPANKIREGGFNIVYN--------------VAMKVANLKQKEASRSFAAEFNALRNIR---HRNLIKIITICS 538 (746)
Q Consensus 476 ~~~~~~~~~~~~ig~g~~g~v~~--------------vavK~~~~~~~~~~~~~~~E~~~l~~l~---HpnIv~l~~~~~ 538 (746)
....++|...+.||+|+||.||+ ||||++... ....+.+|+++++.++ ||||+++++++.
T Consensus 61 ~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~ 137 (365)
T 3e7e_A 61 QLGSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA---NPWEFYIGTQLMERLKPSMQHMFMKFYSAHL 137 (365)
T ss_dssp ECSSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC---CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEE
T ss_pred EECCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC---ChhHHHHHHHHHHHhhhhhhhhhhhhheeee
Confidence 34457799999999999999996 689988643 3446777888877776 999999999999
Q ss_pred cCCcccchhhhccCCccc----------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCC-------
Q 041467 539 SIDFEGFDFKAISNGQLR----------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQ------- 601 (746)
Q Consensus 539 ~~~~~~lv~e~~~~g~l~----------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~------- 601 (746)
..+..++||||+++|+|. ...+++.++..++.||+.||+|||+. +||||||||+|||++.
T Consensus 138 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~~~ 214 (365)
T 3e7e_A 138 FQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQDD 214 (365)
T ss_dssp CSSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC--
T ss_pred cCCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCccc
Confidence 999999999999999985 24689999999999999999999999 9999999999999998
Q ss_pred ----CCcEEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 602 ----DVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 602 ----~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
++.+||+|||+|+.+..... .......+||++|||||++.+..++. ++|||||||++|
T Consensus 215 ~~~~~~~~kl~DFG~a~~~~~~~~------~~~~~~~~gt~~y~aPE~~~~~~~~~---~~DiwslG~il~ 276 (365)
T 3e7e_A 215 EDDLSAGLALIDLGQSIDMKLFPK------GTIFTAKCETSGFQCVEMLSNKPWNY---QIDYFGVAATVY 276 (365)
T ss_dssp ----CTTEEECCCTTCEEGGGSCT------TEEECCSSCTTSCCCHHHHTTCCBST---HHHHHHHHHHHH
T ss_pred cccccCCEEEeeCchhhhhhccCC------CceeeeecCCCCCCChHHhcCCCCCc---cccHHHHHHHHH
Confidence 89999999999976542221 12234578999999999999887654 599999999999
No 134
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=99.98 E-value=1.9e-33 Score=305.14 Aligned_cols=231 Identities=22% Similarity=0.258 Sum_probs=177.3
Q ss_pred hhcCCCCCCeEeecCCeeEEE----------------EEeehhhhhh-hhhhHHHHHHHHHhhcC-CCCceeeEEEEEec
Q 041467 478 ATNNFSPANKIREGGFNIVYN----------------VAMKVANLKQ-KEASRSFAAEFNALRNI-RHRNLIKIITICSS 539 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~----------------vavK~~~~~~-~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~ 539 (746)
..++|+..+.||+|+||.||+ ||||++.... ....+.+.+|+++++++ +|||||+++++|..
T Consensus 67 ~~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 146 (382)
T 3tt0_A 67 PRDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 146 (382)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred chhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeecc
Confidence 346788999999999999994 7999886542 34456799999999999 89999999999999
Q ss_pred CCcccchhhhccCCccc-----c----------------cCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCee
Q 041467 540 IDFEGFDFKAISNGQLR-----L----------------CNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNIL 598 (746)
Q Consensus 540 ~~~~~lv~e~~~~g~l~-----~----------------~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NIL 598 (746)
.+..++||||+++|+|. . ..+++.++..++.|++.||+|||+. +|+||||||+||+
T Consensus 147 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIl 223 (382)
T 3tt0_A 147 DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVL 223 (382)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEE
T ss_pred CCceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcceEE
Confidence 99999999999999985 1 2489999999999999999999999 9999999999999
Q ss_pred eCCCCcEEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-cc---
Q 041467 599 LDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ--- 674 (746)
Q Consensus 599 l~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~--- 674 (746)
++.++.+||+|||+|+........ .......||+.|+|||++.+..++.+ +|||||||++|.... ..
T Consensus 224 l~~~~~~kL~DFG~a~~~~~~~~~------~~~~~~~~t~~y~aPE~~~~~~~~~~---~DiwslG~il~ellt~g~~p~ 294 (382)
T 3tt0_A 224 VTEDNVMKIADFGLARDIHHIDYY------KKTTNGRLPVKWMAPEALFDRIYTHQ---SDVWSFGVLLWEIFTLGGSPY 294 (382)
T ss_dssp ECTTCCEEECSCSCCCCSSCCCTT------CCCTTCCCGGGGSCHHHHHSCCCCHH---HHHHHHHHHHHHHHTTSCCSS
T ss_pred EcCCCcEEEcccCccccccccccc------ccccCCCCCcceeCHHHhcCCCCCch---hHHHHHHHHHHHHHhCCCCCC
Confidence 999999999999999876432211 12233567899999999988777655 999999999982211 10
Q ss_pred ----ccch---hhc--cccCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhcccC
Q 041467 675 ----NKSI---LKS--AGIKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLRL 720 (746)
Q Consensus 675 ----~~~i---~~~--~~~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~ 720 (746)
...+ ... .........+.+..++..|+...|+ ||++.++...++++
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~ 350 (382)
T 3tt0_A 295 PGVPVEELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 350 (382)
T ss_dssp TTCCHHHHHHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 0011 111 1111233445555666666666666 88888777666553
No 135
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=99.98 E-value=1.5e-33 Score=301.85 Aligned_cols=220 Identities=21% Similarity=0.234 Sum_probs=156.0
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhh
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFK 548 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e 548 (746)
..++|+..+.||+|+||.||+ ||||++.... ..+.+.+|++++++++|||||+++++|...+..++|||
T Consensus 51 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 128 (349)
T 2w4o_A 51 LSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLE 128 (349)
T ss_dssp GGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred ccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEE
Confidence 456799999999999999997 8999986432 34568899999999999999999999999999999999
Q ss_pred hccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCC---CCcEEEccccccccccCCC
Q 041467 549 AISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQ---DVVTHVGDLGLAKFLYGYE 620 (746)
Q Consensus 549 ~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~---~~~~ki~DfGla~~~~~~~ 620 (746)
|+++|++. ...+++.++..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||+++.....
T Consensus 129 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~- 204 (349)
T 2w4o_A 129 LVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ- 204 (349)
T ss_dssp CCCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC---------
T ss_pred eCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCccccccCcc-
Confidence 99999985 45689999999999999999999999 9999999999999975 899999999999875321
Q ss_pred CCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccccc------------ccchhhccc-cC--
Q 041467 621 PGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEKKQ------------NKSILKSAG-IK-- 685 (746)
Q Consensus 621 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~~~------------~~~i~~~~~-~~-- 685 (746)
......+||+.|+|||++.+..++. ++|||||||++|...... ...+..... .+
T Consensus 205 --------~~~~~~~gt~~y~aPE~~~~~~~~~---~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~~~~~ 273 (349)
T 2w4o_A 205 --------VLMKTVCGTPGYCAPEILRGCAYGP---EVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISP 273 (349)
T ss_dssp ----------------CGGGSCHHHHTTCCCCT---HHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCCCCTT
T ss_pred --------cccccccCCCCccCHHHhcCCCCCc---ccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCccCCc
Confidence 1123467999999999998877654 599999999998211110 011111111 00
Q ss_pred -CCccHHHHHHhhCCCCCCCCC-CCCccchh
Q 041467 686 -GKKTVSFFLSLLSPSCSVFPL-TPSSNSFT 714 (746)
Q Consensus 686 -~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~ 714 (746)
.......+..++..|....|+ ||+..++.
T Consensus 274 ~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l 304 (349)
T 2w4o_A 274 WWDEVSLNAKDLVRKLIVLDPKKRLTTFQAL 304 (349)
T ss_dssp TTTTSCHHHHHHHHTTSCSSGGGSCCHHHHH
T ss_pred hhhhCCHHHHHHHHHHccCChhhCcCHHHHh
Confidence 123344556666666666666 77777544
No 136
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=99.98 E-value=8.3e-34 Score=292.57 Aligned_cols=225 Identities=16% Similarity=0.210 Sum_probs=172.0
Q ss_pred hcCCCCCCeEeecCCeeEEE-------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecC--Ccccchh
Q 041467 479 TNNFSPANKIREGGFNIVYN-------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSI--DFEGFDF 547 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~-------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~--~~~~lv~ 547 (746)
.++|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++||||+++++++.+. +..++||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT 88 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEETTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred HHHhHHHHHhcCCCcceEEEEEECCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence 46788999999999999997 8999986542 34456799999999999999999999999887 6789999
Q ss_pred hhccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEEcCCCCCCeeeCCCCcEEEccccccccccC
Q 041467 548 KAISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPS--IVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618 (746)
Q Consensus 548 e~~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~--ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~ 618 (746)
||+++|+|. ...+++.++..++.|++.|++|||+. + |+||||||+||+++.++.+||+|||++....
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~- 164 (271)
T 3kmu_A 89 HWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTL---EPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ- 164 (271)
T ss_dssp ECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTS---SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS-
T ss_pred cccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC---CCceecCCCccceEEEcCCcceeEEeccceeeec-
Confidence 999999986 12489999999999999999999998 7 9999999999999999999999998875421
Q ss_pred CCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccccc-----------ccchhhc--cccC
Q 041467 619 YEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEKKQ-----------NKSILKS--AGIK 685 (746)
Q Consensus 619 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~~~-----------~~~i~~~--~~~~ 685 (746)
.....||+.|+|||++.+..++.++.++||||+||++|...... ...+... .+..
T Consensus 165 ------------~~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 232 (271)
T 3kmu_A 165 ------------SPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRPTI 232 (271)
T ss_dssp ------------CTTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHSCCCCCC
T ss_pred ------------ccCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhcCCCCCC
Confidence 11256899999999999877666555799999999998221111 0011111 1111
Q ss_pred CCccHHHHHHhhCCCCCCCCC-CCCccchhhhccc
Q 041467 686 GKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLR 719 (746)
Q Consensus 686 ~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~ 719 (746)
.....+.+..++..|+...|. ||+..++...++.
T Consensus 233 ~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~ 267 (271)
T 3kmu_A 233 PPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEK 267 (271)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 223344455555555556666 7777766655444
No 137
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=99.98 E-value=1.4e-33 Score=294.03 Aligned_cols=182 Identities=24% Similarity=0.379 Sum_probs=139.8
Q ss_pred hhhcCCCCCCeEeecCCeeEEE------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhh
Q 041467 477 KATNNFSPANKIREGGFNIVYN------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFK 548 (746)
Q Consensus 477 ~~~~~~~~~~~ig~g~~g~v~~------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e 548 (746)
...++|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++||||+++++++ .....++|||
T Consensus 21 i~~~~y~~~~~lG~G~~g~Vy~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e 99 (289)
T 3og7_A 21 IPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQ 99 (289)
T ss_dssp CCTTSCEEEEEEEECSSEEEEEEESSSEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEE
T ss_pred cCccceeeeeEecCCCCeEEEEEEEcCceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEE
Confidence 3456899999999999999997 8999886442 34457799999999999999999999965 4566889999
Q ss_pred hccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCC
Q 041467 549 AISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPG 622 (746)
Q Consensus 549 ~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~ 622 (746)
|+.+|++. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 100 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 175 (289)
T 3og7_A 100 WCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSG- 175 (289)
T ss_dssp CCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC-----------
T ss_pred ecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceeccccccccc-
Confidence 99999885 34689999999999999999999999 999999999999999999999999999986532211
Q ss_pred CCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 623 TTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 623 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
........||+.|+|||++.......++.++||||+||++|
T Consensus 176 -----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~ 216 (289)
T 3og7_A 176 -----SHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLY 216 (289)
T ss_dssp -------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHH
T ss_pred -----cccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHH
Confidence 11223467999999999997433333455699999999998
No 138
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=99.98 E-value=1.2e-33 Score=299.42 Aligned_cols=231 Identities=20% Similarity=0.249 Sum_probs=162.2
Q ss_pred hhhhcCCCCCCeEeecCCeeEEE------------EEeehhhhh--hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCC
Q 041467 476 SKATNNFSPANKIREGGFNIVYN------------VAMKVANLK--QKEASRSFAAEFNALRNIRHRNLIKIITICSSID 541 (746)
Q Consensus 476 ~~~~~~~~~~~~ig~g~~g~v~~------------vavK~~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~ 541 (746)
....++|+..+.||+|+||.||+ ||||++... .....+.+.+|++++++++||||+++++++....
T Consensus 19 ~i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 98 (323)
T 3qup_A 19 LIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSR 98 (323)
T ss_dssp BCC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-
T ss_pred ccChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccc
Confidence 34567899999999999999995 799988654 2344678999999999999999999999998876
Q ss_pred cc------cchhhhccCCccc-----------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCc
Q 041467 542 FE------GFDFKAISNGQLR-----------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVV 604 (746)
Q Consensus 542 ~~------~lv~e~~~~g~l~-----------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~ 604 (746)
.. ++||||+.+|++. ...+++.++..++.|++.|++|||+. +|+||||||+||++++++.
T Consensus 99 ~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~ 175 (323)
T 3qup_A 99 AKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMT 175 (323)
T ss_dssp ------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSC
T ss_pred cccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCC
Confidence 55 8999999999985 11589999999999999999999999 9999999999999999999
Q ss_pred EEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-cc-------cc
Q 041467 605 THVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ-------NK 676 (746)
Q Consensus 605 ~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~-------~~ 676 (746)
+||+|||+|+........ .......||+.|+|||++.+..++.+ +||||+||++|.... .. ..
T Consensus 176 ~kl~Dfg~a~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~il~ell~~g~~p~~~~~~~ 246 (323)
T 3qup_A 176 VCVADFGLSRKIYSGDYY------RQGCASKLPVKWLALESLADNLYTVH---SDVWAFGVTMWEIMTRGQTPYAGIENA 246 (323)
T ss_dssp EEECCCCC-----------------------CCGGGCCHHHHHHCCCCHH---HHHHHHHHHHHHHHTTSCCTTTTCCGG
T ss_pred EEEeeccccccccccccc------cccccccCcccccCchhhcCCCCCCc---cchhhHHHHHHHHHhCCCCCccccChH
Confidence 999999999876432211 11223557889999999988877655 999999999983211 11 01
Q ss_pred chh----h-ccccCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhcc
Q 041467 677 SIL----K-SAGIKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGL 718 (746)
Q Consensus 677 ~i~----~-~~~~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~ 718 (746)
.+. . ..........+.+..++..|....|+ ||+..+....++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~ 294 (323)
T 3qup_A 247 EIYNYLIGGNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELE 294 (323)
T ss_dssp GHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred HHHHHHhcCCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence 111 1 11112233445566666666666666 888775554444
No 139
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=99.98 E-value=1.4e-33 Score=291.00 Aligned_cols=177 Identities=25% Similarity=0.345 Sum_probs=141.3
Q ss_pred hcCCCCCCeEeecCCeeEEE-------EEeehhhhhhh----hhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchh
Q 041467 479 TNNFSPANKIREGGFNIVYN-------VAMKVANLKQK----EASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDF 547 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~-------vavK~~~~~~~----~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 547 (746)
.++|+..+.||+|+||.||+ ||||++..... ...+.+.+|+++++.++||||+++++++...+..++||
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVM 85 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEETTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEE
T ss_pred hhheeeeeeeccCCCeEEEEEEEcCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEE
Confidence 46788999999999999997 89999865432 23467899999999999999999999999999999999
Q ss_pred hhccCCccc----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCC--------CCcEEEcccccccc
Q 041467 548 KAISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQ--------DVVTHVGDLGLAKF 615 (746)
Q Consensus 548 e~~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~--------~~~~ki~DfGla~~ 615 (746)
||+++|++. ...+++.++..++.|++.|++|||++...+|+||||||+||+++. ++.+||+|||+++.
T Consensus 86 e~~~~~~L~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~ 165 (271)
T 3dtc_A 86 EFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLARE 165 (271)
T ss_dssp ECCTTEEHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC---
T ss_pred EcCCCCCHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCcccc
Confidence 999999886 567899999999999999999999992223999999999999986 77899999999986
Q ss_pred ccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 616 LYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
..... .....||+.|+|||++.+..++.+ +||||+||++|
T Consensus 166 ~~~~~----------~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~~l~ 205 (271)
T 3dtc_A 166 WHRTT----------KMSAAGAYAWMAPEVIRASMFSKG---SDVWSYGVLLW 205 (271)
T ss_dssp --------------------CCGGGSCHHHHHHCCCSHH---HHHHHHHHHHH
T ss_pred ccccc----------ccCCCCccceeCHHHhccCCCCch---hhHHHHHHHHH
Confidence 53211 123578999999999988776554 99999999998
No 140
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=99.98 E-value=2.9e-33 Score=295.70 Aligned_cols=177 Identities=20% Similarity=0.323 Sum_probs=135.6
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchh
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDF 547 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 547 (746)
..++|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++|||||++++++...+..++||
T Consensus 3 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 82 (317)
T 2pmi_A 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVF 82 (317)
T ss_dssp ----------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEE
T ss_pred cccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEE
Confidence 356899999999999999997 8999886443 233467889999999999999999999999999999999
Q ss_pred hhccCCccc-----------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccc
Q 041467 548 KAISNGQLR-----------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFL 616 (746)
Q Consensus 548 e~~~~g~l~-----------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~ 616 (746)
||+. |++. ...+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 83 e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 158 (317)
T 2pmi_A 83 EFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAF 158 (317)
T ss_dssp ECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCEET
T ss_pred EecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCccceec
Confidence 9998 4553 13589999999999999999999999 9999999999999999999999999999876
Q ss_pred cCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 617 YGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.... .......||+.|+|||++.+... ++.++||||+||++|
T Consensus 159 ~~~~--------~~~~~~~~t~~y~aPE~~~~~~~--~~~~~DiwslG~il~ 200 (317)
T 2pmi_A 159 GIPV--------NTFSSEVVTLWYRAPDVLMGSRT--YSTSIDIWSCGCILA 200 (317)
T ss_dssp TSCC--------CCCCCCCSCCTTCCHHHHTTCCC--CCTHHHHHHHHHHHH
T ss_pred CCCc--------ccCCCCcccccccCchHhhCCCC--CCcHHHHHHHHHHHH
Confidence 3221 11223578999999999976432 244699999999998
No 141
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=99.98 E-value=5.7e-33 Score=302.30 Aligned_cols=184 Identities=14% Similarity=0.145 Sum_probs=154.3
Q ss_pred hhcCCCCCCeEeec--CCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCccc
Q 041467 478 ATNNFSPANKIREG--GFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEG 544 (746)
Q Consensus 478 ~~~~~~~~~~ig~g--~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~ 544 (746)
..++|+..+.||+| +||.||+ ||||++.... ....+.+.+|+++++.++|||||++++++.+.+..+
T Consensus 23 ~~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 102 (389)
T 3gni_B 23 EGGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELW 102 (389)
T ss_dssp CGGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred CCCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEE
Confidence 45789999999999 9999997 8999987543 344567889999999999999999999999999999
Q ss_pred chhhhccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccccccccc
Q 041467 545 FDFKAISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617 (746)
Q Consensus 545 lv~e~~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~ 617 (746)
+||||+++|++. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||.+....
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~ 179 (389)
T 3gni_B 103 VVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMI 179 (389)
T ss_dssp EEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCEECE
T ss_pred EEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccccceeec
Confidence 999999999986 25689999999999999999999999 99999999999999999999999999987653
Q ss_pred CCCCCCCcccccccccccccccccccccccc--cccccCCCccceeeccceee
Q 041467 618 GYEPGTTAETASSSIGINGTVGYVAPVIIAA--RNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~~~~~~DiwSlG~i~~ 668 (746)
....... .........+||+.|+|||++.+ ..++ .++||||+||++|
T Consensus 180 ~~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~---~~~DiwslG~il~ 228 (389)
T 3gni_B 180 SHGQRQR-VVHDFPKYSVKVLPWLSPEVLQQNLQGYD---AKSDIYSVGITAC 228 (389)
T ss_dssp ETTEECS-CBCCCCTTCTTTGGGSCHHHHSTTSSCBC---THHHHHHHHHHHH
T ss_pred ccccccc-ccccccccccccccccCHHHHhccCCCCC---cHhHHHHHHHHHH
Confidence 3221110 11112233579999999999987 3444 4599999999998
No 142
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=99.98 E-value=3.8e-33 Score=295.16 Aligned_cols=175 Identities=23% Similarity=0.321 Sum_probs=148.8
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCC--cccch
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSID--FEGFD 546 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~--~~~lv 546 (746)
.++|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++|||||++++++...+ ..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 87 (319)
T 4euu_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (319)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEE
Confidence 46789999999999999997 8999987543 334567889999999999999999999998765 67899
Q ss_pred hhhccCCccc--------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeee----CCCCcEEEccccccc
Q 041467 547 FKAISNGQLR--------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL----DQDVVTHVGDLGLAK 614 (746)
Q Consensus 547 ~e~~~~g~l~--------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl----~~~~~~ki~DfGla~ 614 (746)
|||+++|+|. ...+++.++..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+|+
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~ 164 (319)
T 4euu_A 88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (319)
T ss_dssp EECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTTCE
T ss_pred EeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCCce
Confidence 9999999985 12389999999999999999999999 99999999999999 788899999999998
Q ss_pred cccCCCCCCCcccccccccccccccccccccccc--------cccccCCCccceeeccceee
Q 041467 615 FLYGYEPGTTAETASSSIGINGTVGYVAPVIIAA--------RNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--------~~~~~~~~~~DiwSlG~i~~ 668 (746)
...... ......||+.|+|||++.. ..+ +.++||||+||++|
T Consensus 165 ~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~---~~~~DiwslG~il~ 214 (319)
T 4euu_A 165 ELEDDE---------QFVSLYGTEEYLHPDMYERAVLRKDHQKKY---GATVDLWSIGVTFY 214 (319)
T ss_dssp ECCTTC---------CBCCCCSCGGGCCHHHHHHHTSCCCCCCCB---CTTHHHHHHHHHHH
T ss_pred ecCCCC---------ceeecccCCCccCHHHhhhccccccccCCC---CcHHHHHHHHHHHH
Confidence 763321 1234679999999999873 334 44699999999998
No 143
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=99.98 E-value=1.8e-33 Score=315.21 Aligned_cols=231 Identities=18% Similarity=0.252 Sum_probs=180.4
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhh
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFK 548 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e 548 (746)
...+|+..+.||+|+||.||+ ||||++.... ...+.|.+|+++|++++|||||+++++|...+..++|||
T Consensus 218 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E 296 (495)
T 1opk_A 218 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 296 (495)
T ss_dssp CGGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred CHHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEE
Confidence 456788899999999999997 8999986432 235679999999999999999999999999999999999
Q ss_pred hccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCC
Q 041467 549 AISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 549 ~~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~ 621 (746)
|+++|+|. ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.......
T Consensus 297 ~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 373 (495)
T 1opk_A 297 FMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTY 373 (495)
T ss_dssp CCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCE
T ss_pred ccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceeccCCce
Confidence 99999985 24589999999999999999999999 999999999999999999999999999987633211
Q ss_pred CCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-cc-------ccchh---hc--cccCCCc
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ-------NKSIL---KS--AGIKGKK 688 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~-------~~~i~---~~--~~~~~~~ 688 (746)
.......++..|+|||++.+..++.+ +|||||||++|.... .. ...+. .. .......
T Consensus 374 -------~~~~~~~~~~~y~aPE~~~~~~~~~~---sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~ 443 (495)
T 1opk_A 374 -------TAHAGAKFPIKWTAPESLAYNKFSIK---SDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEG 443 (495)
T ss_dssp -------ECCTTCCCCGGGCCHHHHHHCEECHH---HHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCTT
T ss_pred -------eecCCCcCCcceeCHhHHhcCCCCcH---HhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCC
Confidence 11223556789999999988777655 999999999982221 10 01111 11 1111234
Q ss_pred cHHHHHHhhCCCCCCCCC-CCCccchhhhcccCCC
Q 041467 689 TVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLRLPS 722 (746)
Q Consensus 689 ~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~~~ 722 (746)
+.+.+..++..|+...|. ||++.++...++.+..
T Consensus 444 ~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~ 478 (495)
T 1opk_A 444 CPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 478 (495)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCS
T ss_pred CCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHh
Confidence 445666666777777777 8999988877776543
No 144
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=99.98 E-value=3.3e-33 Score=301.20 Aligned_cols=173 Identities=20% Similarity=0.257 Sum_probs=142.1
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhh--hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCC-----
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLK--QKEASRSFAAEFNALRNIRHRNLIKIITICSSID----- 541 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~----- 541 (746)
..++|+..+.||+|+||.||+ ||||++... .....+++.+|+++++.++|||||++++++...+
T Consensus 23 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~ 102 (367)
T 1cm8_A 23 VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDF 102 (367)
T ss_dssp CBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTC
T ss_pred ecceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccC
Confidence 356799999999999999997 999988543 2334567899999999999999999999998764
Q ss_pred -cccchhhhccCCccc----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccc
Q 041467 542 -FEGFDFKAISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFL 616 (746)
Q Consensus 542 -~~~lv~e~~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~ 616 (746)
..|+||||+ ++++. ...+++.++..++.||++||+|||+. +|+||||||+||+++.++.+||+|||+|+..
T Consensus 103 ~~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~ 178 (367)
T 1cm8_A 103 TDFYLVMPFM-GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQA 178 (367)
T ss_dssp CCCEEEEECC-SEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEEC
T ss_pred ceEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeeccccc
Confidence 358999999 67765 45789999999999999999999999 9999999999999999999999999999875
Q ss_pred cCCCCCCCcccccccccccccccccccccccc-cccccCCCccceeeccceee
Q 041467 617 YGYEPGTTAETASSSIGINGTVGYVAPVIIAA-RNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~~~~~DiwSlG~i~~ 668 (746)
.. .....+||++|+|||++.+ ..++ .++||||+||++|
T Consensus 179 ~~-----------~~~~~~~t~~y~aPE~~~~~~~~~---~~~DiwslG~il~ 217 (367)
T 1cm8_A 179 DS-----------EMTGYVVTRWYRAPEVILNWMRYT---QTVDIWSVGCIMA 217 (367)
T ss_dssp CS-----------SCCSSCSCGGGCCTHHHHTTTCCC---TTHHHHHHHHHHH
T ss_pred cc-----------ccCcCcCCCCcCCHHHHhCCCCCC---hhhhHHHHHHHHH
Confidence 32 1234678999999999987 4444 4599999999998
No 145
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=99.98 E-value=6e-33 Score=295.64 Aligned_cols=177 Identities=19% Similarity=0.286 Sum_probs=153.9
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccc
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~l 545 (746)
..++|...+.||+|+||.||+ ||+|++.... ....+.+.+|+++++.++||||+++++++.+.+..++
T Consensus 39 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 118 (335)
T 2owb_A 39 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV 118 (335)
T ss_dssp TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred cCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEE
Confidence 356789999999999999997 8999876442 3345678999999999999999999999999999999
Q ss_pred hhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCC
Q 041467 546 DFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620 (746)
Q Consensus 546 v~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~ 620 (746)
||||+.++++. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 119 v~e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 195 (335)
T 2owb_A 119 VLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 195 (335)
T ss_dssp EECCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred EEecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceecccCc
Confidence 99999999886 45789999999999999999999999 99999999999999999999999999998763221
Q ss_pred CCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 621 PGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 621 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
. ......||+.|+|||++.+..++. ++|||||||++|
T Consensus 196 ~--------~~~~~~gt~~y~aPE~~~~~~~~~---~~Di~slG~il~ 232 (335)
T 2owb_A 196 E--------RKKVLCGTPNYIAPEVLSKKGHSF---EVDVWSIGCIMY 232 (335)
T ss_dssp C--------CBCCCCSCCSSCCHHHHHTSCBCT---HHHHHHHHHHHH
T ss_pred c--------cccccCCCccccCHHHhccCCCCc---hhhHHHHHHHHH
Confidence 1 123367999999999998877654 499999999998
No 146
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=99.98 E-value=1.7e-33 Score=296.99 Aligned_cols=180 Identities=23% Similarity=0.303 Sum_probs=153.3
Q ss_pred hhhcCCCCCCeEeecCCeeEEE--------------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCC
Q 041467 477 KATNNFSPANKIREGGFNIVYN--------------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSID 541 (746)
Q Consensus 477 ~~~~~~~~~~~ig~g~~g~v~~--------------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~ 541 (746)
...++|...+.||+|+||.||+ ||||++.... ....+.+.+|++++++++|||||++++++.+.+
T Consensus 20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~ 99 (314)
T 2ivs_A 20 FPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDG 99 (314)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS
T ss_pred cchhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCC
Confidence 3457889999999999999996 7899886432 344567999999999999999999999999999
Q ss_pred cccchhhhccCCccc-----c------------------------cCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCC
Q 041467 542 FEGFDFKAISNGQLR-----L------------------------CNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDL 592 (746)
Q Consensus 542 ~~~lv~e~~~~g~l~-----~------------------------~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDl 592 (746)
..++||||+++|+|. . ..+++.++..++.|++.||+|||+. +|+||||
T Consensus 100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~di 176 (314)
T 2ivs_A 100 PLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDL 176 (314)
T ss_dssp SCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCCC
T ss_pred ceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCccccc
Confidence 999999999999885 1 1378999999999999999999999 9999999
Q ss_pred CCCCeeeCCCCcEEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 593 KPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 593 kp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
||+||+++.++.+||+|||+++........ .......||+.|+|||++.+..++.+ +||||+||++|
T Consensus 177 kp~NIli~~~~~~kl~Dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~il~ 243 (314)
T 2ivs_A 177 AARNILVAEGRKMKISDFGLSRDVYEEDSY------VKRSQGRIPVKWMAIESLFDHIYTTQ---SDVWSFGVLLW 243 (314)
T ss_dssp SGGGEEEETTTEEEECCCTTCEECTTTSCE------ECSSCCCSCGGGCCHHHHHHCEECHH---HHHHHHHHHHH
T ss_pred chheEEEcCCCCEEEccccccccccccccc------eeccCCCCcccccChhhhcCCCcCch---hhHHHHHHHHH
Confidence 999999999999999999999876432211 11223567889999999988777655 99999999998
No 147
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=99.97 E-value=1.2e-33 Score=293.24 Aligned_cols=178 Identities=21% Similarity=0.300 Sum_probs=140.4
Q ss_pred hhhcCCCCCCeEeecCCeeEEE------------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcc
Q 041467 477 KATNNFSPANKIREGGFNIVYN------------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFE 543 (746)
Q Consensus 477 ~~~~~~~~~~~ig~g~~g~v~~------------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~ 543 (746)
...++|+..+.||+|+||.||+ ||||+..... ....+.+.+|+.++++++||||+++++++. .+..
T Consensus 12 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~ 90 (281)
T 1mp8_A 12 IQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPV 90 (281)
T ss_dssp CCGGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSC
T ss_pred EehHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCcc
Confidence 3456889999999999999996 7888876432 334567999999999999999999999984 4678
Q ss_pred cchhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccccccccc
Q 041467 544 GFDFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617 (746)
Q Consensus 544 ~lv~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~ 617 (746)
++||||+++|++. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 167 (281)
T 1mp8_A 91 WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 167 (281)
T ss_dssp EEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC--------
T ss_pred EEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECccccccccC
Confidence 8999999999886 23689999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 618 GYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.... .......||+.|+|||++.+..++.+ +||||+||++|
T Consensus 168 ~~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~~l~ 208 (281)
T 1mp8_A 168 DSTY-------YKASKGKLPIKWMAPESINFRRFTSA---SDVWMFGVCMW 208 (281)
T ss_dssp ------------------CCGGGCCHHHHHHCCCSHH---HHHHHHHHHHH
T ss_pred cccc-------cccccCCCcccccChhhcccCCCCCc---cCchHHHHHHH
Confidence 3211 11223457889999999987776554 99999999988
No 148
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=99.97 E-value=5.3e-33 Score=287.93 Aligned_cols=177 Identities=22% Similarity=0.344 Sum_probs=134.6
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccc
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~l 545 (746)
..++|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 9 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 88 (278)
T 3cok_A 9 KIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYL 88 (278)
T ss_dssp SGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEE
T ss_pred ccccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEE
Confidence 456799999999999999997 8999986443 2234679999999999999999999999999999999
Q ss_pred hhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCC
Q 041467 546 DFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGY 619 (746)
Q Consensus 546 v~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~ 619 (746)
||||+++|++. ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~ 165 (278)
T 3cok_A 89 VLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMP 165 (278)
T ss_dssp EEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC--
T ss_pred EEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeeccCC
Confidence 99999999885 25689999999999999999999999 9999999999999999999999999999875322
Q ss_pred CCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 620 EPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 620 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
. .......||+.|+|||++.+..++. ++||||+||++|
T Consensus 166 ~--------~~~~~~~~~~~y~aPE~~~~~~~~~---~~Di~slG~il~ 203 (278)
T 3cok_A 166 H--------EKHYTLCGTPNYISPEIATRSAHGL---ESDVWSLGCMFY 203 (278)
T ss_dssp -------------------------------------CTHHHHHHHHHH
T ss_pred C--------CcceeccCCCCcCCcchhcCCCCCc---hhhHHHHHHHHH
Confidence 1 1122367899999999998876655 499999999998
No 149
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.97 E-value=9.4e-31 Score=280.21 Aligned_cols=279 Identities=22% Similarity=0.339 Sum_probs=237.5
Q ss_pred ccccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCC
Q 041467 14 CILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLE 93 (746)
Q Consensus 14 ~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 93 (746)
+..+++|++|+|++|.+++ +|. +..+++|++|+|++|.++. +| .|.++++|++|++++|.+.+. +. +..+++|+
T Consensus 62 ~~~~~~L~~L~l~~n~i~~-~~~-~~~l~~L~~L~L~~n~i~~-~~-~~~~l~~L~~L~l~~n~i~~~-~~-~~~l~~L~ 135 (347)
T 4fmz_A 62 IEYLTNLEYLNLNGNQITD-ISP-LSNLVKLTNLYIGTNKITD-IS-ALQNLTNLRELYLNEDNISDI-SP-LANLTKMY 135 (347)
T ss_dssp GGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCSEEECTTSCCCCC-GG-GTTCTTCC
T ss_pred hhhcCCccEEEccCCcccc-chh-hhcCCcCCEEEccCCcccC-ch-HHcCCCcCCEEECcCCcccCc-hh-hccCCcee
Confidence 5668999999999999984 554 9999999999999999985 44 699999999999999999654 33 89999999
Q ss_pred EEEccCCCCc---CcccCCCCCCEEeccCCCccc---ccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCC
Q 041467 94 RLRIDCGGRI---DSLGHLKSLLLLSLAFNQFLS---LSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGS 167 (746)
Q Consensus 94 ~L~l~~~~~~---~~~~~l~~L~~L~Ls~N~l~~---l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 167 (746)
.|+++++... ..+..+++|+.|++++|.+.. +..+++|+.|++++|++++..+ +..+++|+.|++++|.++.
T Consensus 136 ~L~l~~n~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~ 213 (347)
T 4fmz_A 136 SLNLGANHNLSDLSPLSNMTGLNYLTVTESKVKDVTPIANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITD 213 (347)
T ss_dssp EEECTTCTTCCCCGGGTTCTTCCEEECCSSCCCCCGGGGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC
T ss_pred EEECCCCCCcccccchhhCCCCcEEEecCCCcCCchhhccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCC
Confidence 9999986433 568899999999999999954 6789999999999999986544 8899999999999999976
Q ss_pred CCCCCccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceec
Q 041467 168 GTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGT 247 (746)
Q Consensus 168 ~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~ 247 (746)
. +. +..+++|+.|++++|.+++. |. +..++ +|+.|++++|.+++. +.+..+++|++|++++|++.+.
T Consensus 214 ~-------~~-~~~~~~L~~L~l~~n~l~~~-~~-~~~l~-~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~ 280 (347)
T 4fmz_A 214 I-------TP-VANMTRLNSLKIGNNKITDL-SP-LANLS-QLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI 280 (347)
T ss_dssp C-------GG-GGGCTTCCEEECCSSCCCCC-GG-GTTCT-TCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC
T ss_pred C-------ch-hhcCCcCCEEEccCCccCCC-cc-hhcCC-CCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC
Confidence 2 22 77899999999999999854 43 77777 799999999999863 5789999999999999999864
Q ss_pred CCcCCCCCCCCceeecccccccccccccccccChHHhhhccCCCCCCccccCCCCCCeeeecCCcCccccchhhhhcccc
Q 041467 248 IPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTL 327 (746)
Q Consensus 248 ~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l 327 (746)
+.+..+++|+.|++++|.+++. .|..|+.+++|+.|++++|++++..| +..++++
T Consensus 281 --~~~~~l~~L~~L~L~~n~l~~~---------------------~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L 335 (347)
T 4fmz_A 281 --SVLNNLSQLNSLFLNNNQLGNE---------------------DMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKM 335 (347)
T ss_dssp --GGGGGCTTCSEEECCSSCCCGG---------------------GHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTC
T ss_pred --hhhcCCCCCCEEECcCCcCCCc---------------------ChhHhhccccCCEEEccCCccccccC--hhhhhcc
Confidence 4688999999999999998743 34567788999999999999996555 8888898
Q ss_pred cceEEccCcccc
Q 041467 328 SLYLELDNNLLN 339 (746)
Q Consensus 328 ~~~L~Ls~N~l~ 339 (746)
+.|++++|.|+
T Consensus 336 -~~L~l~~N~i~ 346 (347)
T 4fmz_A 336 -DSADFANQVIK 346 (347)
T ss_dssp -SEESSSCC---
T ss_pred -ceeehhhhccc
Confidence 68999999986
No 150
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.97 E-value=2.9e-31 Score=282.31 Aligned_cols=280 Identities=20% Similarity=0.236 Sum_probs=209.5
Q ss_pred ccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEc
Q 041467 18 TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRI 97 (746)
Q Consensus 18 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 97 (746)
.+++.+++++|.++ .+|..+. ++|++|+|++|.+++..|..|.++++|++|+|++|.+.+..|..|.++++
T Consensus 33 c~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~------ 103 (332)
T 2ft3_A 33 CHLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRK------ 103 (332)
T ss_dssp EETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTT------
T ss_pred ccCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCC------
Confidence 46899999999997 7787664 68999999999999777888999999999999999987766666555554
Q ss_pred cCCCCcCcccCCCCCCEEeccCCCccccc--CCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccc
Q 041467 98 DCGGRIDSLGHLKSLLLLSLAFNQFLSLS--NASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDF 175 (746)
Q Consensus 98 ~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~--~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 175 (746)
|++|+|++|++..++ -.++|++|++++|++++..+..|..+++|++|++++|.++... ..
T Consensus 104 --------------L~~L~L~~n~l~~l~~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~----~~ 165 (332)
T 2ft3_A 104 --------------LQKLYISKNHLVEIPPNLPSSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSG----FE 165 (332)
T ss_dssp --------------CCEEECCSSCCCSCCSSCCTTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGG----SC
T ss_pred --------------CCEEECCCCcCCccCccccccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCC----CC
Confidence 445555555554332 1267888888888888777777888888888888888885311 12
Q ss_pred cccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCC
Q 041467 176 INLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGET 255 (746)
Q Consensus 176 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 255 (746)
+..+..+ +|+.|++++|++++ +|..+. .+|+.|++++|++++..|..|.++++|+.|+|++|++.+..|..+..+
T Consensus 166 ~~~~~~l-~L~~L~l~~n~l~~-l~~~~~---~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l 240 (332)
T 2ft3_A 166 PGAFDGL-KLNYLRISEAKLTG-IPKDLP---ETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFL 240 (332)
T ss_dssp TTSSCSC-CCSCCBCCSSBCSS-CCSSSC---SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGC
T ss_pred cccccCC-ccCEEECcCCCCCc-cCcccc---CCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCC
Confidence 3456666 88888888888874 565543 368888888888887777888888888888888888887777788888
Q ss_pred CCCceeecccccccccccccccccChHHhhhccCCCCCCccccCCCCCCeeeecCCcCccccchhhhhc------ccccc
Q 041467 256 PNLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSV------TTLSL 329 (746)
Q Consensus 256 ~~L~~L~Ls~N~l~~~~~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l------~~l~~ 329 (746)
++|+.|+|++|+++ .+|..+..+++|+.|++++|+|++..+..+... ..+ .
T Consensus 241 ~~L~~L~L~~N~l~----------------------~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l-~ 297 (332)
T 2ft3_A 241 PTLRELHLDNNKLS----------------------RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYY-N 297 (332)
T ss_dssp TTCCEEECCSSCCC----------------------BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCB-S
T ss_pred CCCCEEECCCCcCe----------------------ecChhhhcCccCCEEECCCCCCCccChhHccccccccccccc-c
Confidence 88888888888876 456667788888888888888885444444433 334 5
Q ss_pred eEEccCcccc--ccCchhhhcccCC
Q 041467 330 YLELDNNLLN--GSLPPEVGNLKNL 352 (746)
Q Consensus 330 ~L~Ls~N~l~--~~~p~~~~~l~~L 352 (746)
.|++++|++. +..|..|..+++|
T Consensus 298 ~L~l~~N~~~~~~~~~~~~~~l~~L 322 (332)
T 2ft3_A 298 GISLFNNPVPYWEVQPATFRCVTDR 322 (332)
T ss_dssp EEECCSSSSCGGGSCGGGGTTBCCS
T ss_pred ceEeecCcccccccCcccccccchh
Confidence 7888888876 4455555544443
No 151
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=99.97 E-value=2.2e-33 Score=311.05 Aligned_cols=224 Identities=20% Similarity=0.212 Sum_probs=172.7
Q ss_pred hhhcCCCCCCeEeecCCeeEEE-------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCC-cccchhh
Q 041467 477 KATNNFSPANKIREGGFNIVYN-------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSID-FEGFDFK 548 (746)
Q Consensus 477 ~~~~~~~~~~~ig~g~~g~v~~-------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~-~~~lv~e 548 (746)
...++|+..+.||+|+||.||+ ||||+++... ..+.|.+|+++|++++|||||++++++.... ..++|||
T Consensus 190 i~~~~~~~~~~lG~G~fg~V~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e 267 (450)
T 1k9a_A 190 LNMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 267 (450)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEE
T ss_pred cChHHeEEEeeecCcCCeeEEEEEecCCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEE
Confidence 3456788999999999999997 9999986432 4567999999999999999999999987765 7899999
Q ss_pred hccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCC
Q 041467 549 AISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 549 ~~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~ 621 (746)
|+++|+|. ...+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 268 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~-- 342 (450)
T 1k9a_A 268 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST-- 342 (450)
T ss_dssp CCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC----
T ss_pred ecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCccccccc--
Confidence 99999986 22379999999999999999999999 9999999999999999999999999999854211
Q ss_pred CCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-cc-------ccchh----hc-cccCCCc
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ-------NKSIL----KS-AGIKGKK 688 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~-------~~~i~----~~-~~~~~~~ 688 (746)
.....++..|+|||++.+..++.+ +|||||||++|.... .. ...+. .. .......
T Consensus 343 ---------~~~~~~~~~y~aPE~~~~~~~~~~---sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~p~~ 410 (450)
T 1k9a_A 343 ---------QDTGKLPVKWTAPEALREKKFSTK---SDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDG 410 (450)
T ss_dssp -------------CCCTTTSCHHHHHSSCCCHH---HHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHTTCCCCCCTT
T ss_pred ---------ccCCCCCcceeCHHHhcCCCCCcH---HHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCc
Confidence 112357889999999988877655 999999999983221 10 01111 10 1112234
Q ss_pred cHHHHHHhhCCCCCCCCC-CCCccchhhhccc
Q 041467 689 TVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLR 719 (746)
Q Consensus 689 ~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~ 719 (746)
+.+.+..++..|+...|. ||+..++...++.
T Consensus 411 ~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~ 442 (450)
T 1k9a_A 411 CPPAVYDVMKNCWHLDAATRPTFLQLREQLEH 442 (450)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHH
Confidence 456666677777777777 8888876654443
No 152
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.97 E-value=4.9e-33 Score=322.03 Aligned_cols=215 Identities=20% Similarity=0.200 Sum_probs=170.9
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhh---hhhhhHHHHHHHHHhhcC-CCCceeeEEEEEecCCccc
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLK---QKEASRSFAAEFNALRNI-RHRNLIKIITICSSIDFEG 544 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~---~~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~~~~~~ 544 (746)
..++|+..+.||+|+||.||+ ||||++... .....+.+.+|.++++.+ +||+|+++++++.+.+..|
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 356899999999999999996 899998754 234456788999999988 6999999999999999999
Q ss_pred chhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCC
Q 041467 545 FDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGY 619 (746)
Q Consensus 545 lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~ 619 (746)
+||||+++|+|. ...+++.++..|+.||+.||+|||+. +||||||||+|||++.++.+||+|||+|+.....
T Consensus 419 lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~ 495 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWD 495 (674)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCEECCCT
T ss_pred EEEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceeeccccC
Confidence 999999999986 46799999999999999999999999 9999999999999999999999999999864221
Q ss_pred CCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-----------ccccchhhccc----c
Q 041467 620 EPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-----------KQNKSILKSAG----I 684 (746)
Q Consensus 620 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-----------~~~~~i~~~~~----~ 684 (746)
. ......+||+.|||||++.+..++. ++|||||||++|.... +....|..... .
T Consensus 496 ~--------~~~~~~~GT~~Y~APE~l~~~~~~~---~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~p~~ 564 (674)
T 3pfq_A 496 G--------VTTKTFCGTPDYIAPEIIAYQPYGK---SVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKS 564 (674)
T ss_dssp T--------CCBCCCCSCSSSCCHHHHTCCCBST---HHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSSCCCCCTT
T ss_pred C--------cccccccCCCcccCHhhhcCCCCCc---cceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCcc
Confidence 1 1234578999999999998887755 5999999999992111 11112222211 1
Q ss_pred CCCccHHHHHHhhCCCCCCCCC
Q 041467 685 KGKKTVSFFLSLLSPSCSVFPL 706 (746)
Q Consensus 685 ~~~~~~~~~~~~~~~~~~~~p~ 706 (746)
.+.+..+.+..|+..++.+||.
T Consensus 565 ~s~~~~~li~~lL~~dP~~R~~ 586 (674)
T 3pfq_A 565 MSKEAVAICKGLMTKHPGKRLG 586 (674)
T ss_dssp SCHHHHHHHHHHSCSSSTTCTT
T ss_pred CCHHHHHHHHHHccCCHHHCCC
Confidence 2245566777777777766654
No 153
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=1.2e-33 Score=304.85 Aligned_cols=231 Identities=19% Similarity=0.235 Sum_probs=163.8
Q ss_pred cCCCCCCeEeecCCeeEEE------------EEeehhhhh-hhhhhHHHHHHHHHhhcCCCCceeeEEEEEec-CCcccc
Q 041467 480 NNFSPANKIREGGFNIVYN------------VAMKVANLK-QKEASRSFAAEFNALRNIRHRNLIKIITICSS-IDFEGF 545 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~------------vavK~~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~~~~~l 545 (746)
..|+..+.||+|+||.||+ ||||++... .....+.+.+|+.++++++|||||+++++|.. .+..++
T Consensus 89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~l 168 (373)
T 3c1x_A 89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 168 (373)
T ss_dssp EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEE
T ss_pred ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEE
Confidence 3466778999999999995 788887543 23456789999999999999999999999765 457889
Q ss_pred hhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCC
Q 041467 546 DFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGY 619 (746)
Q Consensus 546 v~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~ 619 (746)
||||+++|+|. ...+++.++..++.||++||+|||+. +|+||||||+||+++.++.+||+|||+|+.+...
T Consensus 169 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~ 245 (373)
T 3c1x_A 169 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 245 (373)
T ss_dssp EEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC---------
T ss_pred EEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeecccccccccc
Confidence 99999999986 34578999999999999999999999 9999999999999999999999999999876432
Q ss_pred CCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-cc-------cc----chhh-ccccCC
Q 041467 620 EPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ-------NK----SILK-SAGIKG 686 (746)
Q Consensus 620 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~-------~~----~i~~-~~~~~~ 686 (746)
... .........||+.|+|||++.+..++.+ +|||||||++|.... .. .. .+.. ......
T Consensus 246 ~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~---~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~~~~~~~p 318 (373)
T 3c1x_A 246 EFD----SVHNKTGAKLPVKWMALESLQTQKFTTK---SDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQP 318 (373)
T ss_dssp ----------------CCGGGSCHHHHHHCCCCHH---HHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHTTCCCCCC
T ss_pred ccc----cccccCCCCCcccccChHHhcCCCCCcH---HHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHcCCCCCCC
Confidence 211 1112234567889999999988877655 999999999982211 10 00 0111 111112
Q ss_pred CccHHHHHHhhCCCCCCCCC-CCCccchhhhcccC
Q 041467 687 KKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLRL 720 (746)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~ 720 (746)
..+.+.+..++..|+...|. ||+..++...++.+
T Consensus 319 ~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i 353 (373)
T 3c1x_A 319 EYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 353 (373)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 33445566666666666676 88888777665553
No 154
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=99.97 E-value=8.2e-33 Score=288.99 Aligned_cols=177 Identities=19% Similarity=0.286 Sum_probs=153.5
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccc
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~l 545 (746)
..++|...+.||+|+||.||+ ||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 13 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 92 (294)
T 2rku_A 13 SRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFV 92 (294)
T ss_dssp TTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred cccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEE
Confidence 346789999999999999997 8999876442 3345678999999999999999999999999999999
Q ss_pred hhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCC
Q 041467 546 DFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620 (746)
Q Consensus 546 v~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~ 620 (746)
||||++++++. ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 93 v~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~ 169 (294)
T 2rku_A 93 VLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG 169 (294)
T ss_dssp EEECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCSTT
T ss_pred EEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceecccCc
Confidence 99999999886 35789999999999999999999999 99999999999999999999999999998753221
Q ss_pred CCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 621 PGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 621 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
. ......||+.|+|||++.+..++. ++||||+||++|
T Consensus 170 ~--------~~~~~~~~~~y~aPE~~~~~~~~~---~~Di~slG~~l~ 206 (294)
T 2rku_A 170 E--------RKKVLCGTPNYIAPEVLSKKGHSF---EVDVWSIGCIMY 206 (294)
T ss_dssp C--------CBCCCCSCCSSCCHHHHTTSCBCT---HHHHHHHHHHHH
T ss_pred c--------ccccccCCCCcCCcchhccCCCCc---hhhHHHHHHHHH
Confidence 1 122367899999999998776654 599999999998
No 155
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=99.97 E-value=1.5e-32 Score=285.41 Aligned_cols=176 Identities=22% Similarity=0.351 Sum_probs=152.1
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccch
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
..++|+..+.||+|+||.||+ ||+|++.... ....+.+.+|++++++++||||+++++++...+..++|
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v 83 (284)
T 3kk8_A 4 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 83 (284)
T ss_dssp TTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEE
Confidence 357899999999999999997 8999986543 33456789999999999999999999999999999999
Q ss_pred hhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCc---EEEccccccccccC
Q 041467 547 FKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVV---THVGDLGLAKFLYG 618 (746)
Q Consensus 547 ~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~---~ki~DfGla~~~~~ 618 (746)
|||+++|++. ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++. +||+|||++.....
T Consensus 84 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 160 (284)
T 3kk8_A 84 FDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 160 (284)
T ss_dssp ECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCS
T ss_pred EecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEccc
Confidence 9999999885 45689999999999999999999999 9999999999999976554 99999999976532
Q ss_pred CCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 619 YEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 619 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
. .......||+.|+|||++.+..++. ++||||+||++|
T Consensus 161 ~---------~~~~~~~~~~~y~aPE~~~~~~~~~---~~Di~slG~~l~ 198 (284)
T 3kk8_A 161 S---------EAWHGFAGTPGYLSPEVLKKDPYSK---PVDIWACGVILY 198 (284)
T ss_dssp S---------CBCCCSCSCGGGCCHHHHTTCCBCT---HHHHHHHHHHHH
T ss_pred C---------ccccCCCCCcCCcCchhhcCCCCCc---ccchHHHHHHHH
Confidence 2 1123467999999999998877654 499999999998
No 156
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=99.97 E-value=8e-33 Score=291.14 Aligned_cols=175 Identities=25% Similarity=0.386 Sum_probs=144.2
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh-----hhhhHHHHHHHHHhhcCC---CCceeeEEEEEecC
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ-----KEASRSFAAEFNALRNIR---HRNLIKIITICSSI 540 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~-----~~~~~~~~~E~~~l~~l~---HpnIv~l~~~~~~~ 540 (746)
..++|+..+.||+|+||.||+ ||||++.... ......+.+|++++++++ |||||+++++|...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 357899999999999999997 8999986432 112346778888777775 99999999999875
Q ss_pred C-----cccchhhhccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEc
Q 041467 541 D-----FEGFDFKAISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVG 608 (746)
Q Consensus 541 ~-----~~~lv~e~~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~ 608 (746)
. ..++||||+. |++. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~ 162 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLA 162 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCEEEC
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEEe
Confidence 5 4789999997 4654 22389999999999999999999999 99999999999999999999999
Q ss_pred cccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 609 DLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 609 DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
|||+|+..... .......||+.|+|||++.+..++.+ +||||+||++|
T Consensus 163 Dfg~a~~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~---~DiwslG~il~ 210 (308)
T 3g33_A 163 DFGLARIYSYQ---------MALTPVVVTLWYRAPEVLLQSTYATP---VDMWSVGCIFA 210 (308)
T ss_dssp SCSCTTTSTTC---------CCSGGGGCCCSSCCHHHHHTSCCCST---HHHHHHHHHHH
T ss_pred eCccccccCCC---------cccCCccccccccCchHHcCCCCCch---HHHHHHHHHHH
Confidence 99999865321 12234679999999999988877554 99999999998
No 157
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=99.97 E-value=2.6e-33 Score=290.98 Aligned_cols=227 Identities=18% Similarity=0.248 Sum_probs=170.0
Q ss_pred hhhcCCCCCCeEeecCCeeEEE--------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhh
Q 041467 477 KATNNFSPANKIREGGFNIVYN--------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFK 548 (746)
Q Consensus 477 ~~~~~~~~~~~ig~g~~g~v~~--------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e 548 (746)
...++|+..+.||+|+||.||+ ||||++..... ..+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 21 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 99 (283)
T 3gen_A 21 IDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITE 99 (283)
T ss_dssp CCGGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEC
T ss_pred CCHHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEe
Confidence 3456888999999999999996 89999864422 34668999999999999999999999999999999999
Q ss_pred hccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCC
Q 041467 549 AISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPG 622 (746)
Q Consensus 549 ~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~ 622 (746)
|+++|++. ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 100 ~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~--- 173 (283)
T 3gen_A 100 YMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD--- 173 (283)
T ss_dssp CCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCH---
T ss_pred ccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEcccccccccccc---
Confidence 99999885 35689999999999999999999999 9999999999999999999999999999865321
Q ss_pred CCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-cc-----------ccchhhc-cccCCCcc
Q 041467 623 TTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ-----------NKSILKS-AGIKGKKT 689 (746)
Q Consensus 623 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~-----------~~~i~~~-~~~~~~~~ 689 (746)
.........||+.|+|||++.+..++.+ +||||+||++|.... .. ...+... ........
T Consensus 174 ----~~~~~~~~~~~~~y~aPE~~~~~~~~~~---~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (283)
T 3gen_A 174 ----EYTSSVGSKFPVRWSPPEVLMYSKFSSK---SDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLA 246 (283)
T ss_dssp ----HHHSTTSTTSCGGGCCHHHHHHCCCSHH---HHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCTTC
T ss_pred ----ccccccCCccCcccCCHHHhccCCCCch---hhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhcccCCCCCCcC
Confidence 1122234567889999999998776554 999999999983221 11 0011111 11112223
Q ss_pred HHHHHHhhCCCCCCCCC-CCCccchhhhc
Q 041467 690 VSFFLSLLSPSCSVFPL-TPSSNSFTLLG 717 (746)
Q Consensus 690 ~~~~~~~~~~~~~~~p~-~p~~~~~~~~~ 717 (746)
.+.+..++..|+...|. ||+..++...+
T Consensus 247 ~~~l~~li~~~l~~~p~~Rps~~~ll~~L 275 (283)
T 3gen_A 247 SEKVYTIMYSCWHEKADERPTFKILLSNI 275 (283)
T ss_dssp CHHHHHHHHHTTCSSGGGSCCHHHHHHHH
T ss_pred CHHHHHHHHHHccCChhHCcCHHHHHHHH
Confidence 34455555555555665 77777655443
No 158
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=99.97 E-value=2.8e-33 Score=310.26 Aligned_cols=233 Identities=21% Similarity=0.271 Sum_probs=174.3
Q ss_pred HhhhhcCCCCCCeEeecCCeeEEE--------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccch
Q 041467 475 LSKATNNFSPANKIREGGFNIVYN--------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 475 ~~~~~~~~~~~~~ig~g~~g~v~~--------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
+....++|+..+.||+|+||.||+ ||||++.... ...+.|.+|+++|++++|||||++++++.+ +..++|
T Consensus 179 ~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv 256 (452)
T 1fmk_A 179 WEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIV 256 (452)
T ss_dssp SBCCGGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEE
T ss_pred cccChhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEE
Confidence 334556788999999999999997 8999987543 234679999999999999999999999876 678999
Q ss_pred hhhccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCC
Q 041467 547 FKAISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGY 619 (746)
Q Consensus 547 ~e~~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~ 619 (746)
|||+++|+|. ...+++.++..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+++.....
T Consensus 257 ~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 333 (452)
T 1fmk_A 257 TEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDN 333 (452)
T ss_dssp ECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC-----
T ss_pred ehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecCCC
Confidence 9999999986 24589999999999999999999999 9999999999999999999999999999876432
Q ss_pred CCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-cc-------ccchhh----c-cccCC
Q 041467 620 EPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ-------NKSILK----S-AGIKG 686 (746)
Q Consensus 620 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~-------~~~i~~----~-~~~~~ 686 (746)
.. .......||..|+|||++.+..++.+ +|||||||++|.... .. ..++.. . .....
T Consensus 334 ~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~---sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~ 403 (452)
T 1fmk_A 334 EY-------TARQGAKFPIKWTAPEAALYGRFTIK---SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCP 403 (452)
T ss_dssp ----------------CCGGGSCHHHHHHCCCCHH---HHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCC
T ss_pred ce-------ecccCCcccccccCHhHHhcCCCCcc---ccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCC
Confidence 11 11223457889999999988777554 999999999983221 10 001111 1 11112
Q ss_pred CccHHHHHHhhCCCCCCCCC-CCCccchhhhcccCCC
Q 041467 687 KKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLRLPS 722 (746)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~~~ 722 (746)
..+.+.+..++..|+...|. ||++.++...++.+..
T Consensus 404 ~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~ 440 (452)
T 1fmk_A 404 PECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFT 440 (452)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTS
T ss_pred CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhc
Confidence 34455566667777777777 8899887776666543
No 159
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=99.97 E-value=4.3e-33 Score=305.71 Aligned_cols=178 Identities=20% Similarity=0.301 Sum_probs=139.8
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhh--------hhhHHHHHHHHHhhcCCCCceeeEEEEEecC
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQK--------EASRSFAAEFNALRNIRHRNLIKIITICSSI 540 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~--------~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~ 540 (746)
..++|...+.||+|+||.||+ ||||++..... .....+.+|++++++++|||||++++++..
T Consensus 133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~- 211 (419)
T 3i6u_A 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA- 211 (419)
T ss_dssp HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-
T ss_pred hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-
Confidence 457899999999999999997 89999865421 122358899999999999999999999865
Q ss_pred CcccchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCC---CcEEEccccc
Q 041467 541 DFEGFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQD---VVTHVGDLGL 612 (746)
Q Consensus 541 ~~~~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~---~~~ki~DfGl 612 (746)
+..++||||+++|+|. ...+++.++..++.|++.||+|||++ +|+||||||+|||++.+ +.+||+|||+
T Consensus 212 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl~DFG~ 288 (419)
T 3i6u_A 212 EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGH 288 (419)
T ss_dssp SEEEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEECCSST
T ss_pred CceEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEEeeccc
Confidence 4578999999999985 45689999999999999999999999 99999999999999654 4599999999
Q ss_pred cccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 613 AKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 613 a~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
|+..... ......+||+.|+|||++.+.....++.++||||+||++|
T Consensus 289 a~~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ 335 (419)
T 3i6u_A 289 SKILGET---------SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 335 (419)
T ss_dssp TTSCC--------------------CTTCCTTTTC----CTTHHHHHHHHHHHHHH
T ss_pred ceecCCC---------ccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHH
Confidence 9876321 1223467999999999997533333455699999999998
No 160
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=99.97 E-value=8.8e-33 Score=297.58 Aligned_cols=182 Identities=28% Similarity=0.322 Sum_probs=154.8
Q ss_pred CcccHHHHhhhhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCC-----CCceeeE
Q 041467 468 PMISHAELSKATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIR-----HRNLIKI 533 (746)
Q Consensus 468 ~~~~~~~~~~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~-----HpnIv~l 533 (746)
..++..+-....++|+..+.||+|+||.||+ ||||++... ....+.+.+|++++++++ |||||++
T Consensus 23 ~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~ 101 (360)
T 3llt_A 23 VHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKY 101 (360)
T ss_dssp GSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCE
T ss_pred eeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeecc
Confidence 3455555566678999999999999999996 899998632 234456788999999986 9999999
Q ss_pred EEEEecCCcccchhhhccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCC-----
Q 041467 534 ITICSSIDFEGFDFKAISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQ----- 601 (746)
Q Consensus 534 ~~~~~~~~~~~lv~e~~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~----- 601 (746)
++++...+..++||||+ +|+|. ...+++.++..++.||+.||+|||+. +|+||||||+|||++.
T Consensus 102 ~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~ 177 (360)
T 3llt_A 102 HGKFMYYDHMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPYFEK 177 (360)
T ss_dssp EEEEEETTEEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTTCCE
T ss_pred cceeeECCeeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEccccccc
Confidence 99999999999999999 78875 23489999999999999999999999 9999999999999975
Q ss_pred --------------------CCcEEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCcccee
Q 041467 602 --------------------DVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVM 661 (746)
Q Consensus 602 --------------------~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~Diw 661 (746)
++.+||+|||+|+..... .....||+.|+|||++.+..++.+ +|||
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~-----------~~~~~gt~~y~aPE~~~~~~~~~~---~Diw 243 (360)
T 3llt_A 178 SLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY-----------HGSIINTRQYRAPEVILNLGWDVS---SDMW 243 (360)
T ss_dssp EEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC-----------CCSCCSCGGGCCHHHHTTCCCCTT---HHHH
T ss_pred cccchhcccccccccccccCCCCEEEEeccCceecCCC-----------CcCccCcccccCcHHHcCCCCCCc---cchH
Confidence 789999999999864221 123678999999999998877654 9999
Q ss_pred eccceee
Q 041467 662 SFPQRFA 668 (746)
Q Consensus 662 SlG~i~~ 668 (746)
|+||++|
T Consensus 244 slG~il~ 250 (360)
T 3llt_A 244 SFGCVLA 250 (360)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999998
No 161
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=99.97 E-value=7.1e-33 Score=293.31 Aligned_cols=176 Identities=24% Similarity=0.276 Sum_probs=152.5
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhh------hhHHHHHHHHHhhcCCCCceeeEEEEEecCCc
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKE------ASRSFAAEFNALRNIRHRNLIKIITICSSIDF 542 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~------~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~ 542 (746)
..++|+..+.||+|+||.||+ ||||++...... ..+.+.+|++++++++||||+++++++.+.+.
T Consensus 10 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 89 (321)
T 2a2a_A 10 VEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTD 89 (321)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSE
T ss_pred hhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCE
Confidence 356789999999999999997 899988654221 35679999999999999999999999999999
Q ss_pred ccchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCC----cEEEcccccc
Q 041467 543 EGFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDV----VTHVGDLGLA 613 (746)
Q Consensus 543 ~~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~----~~ki~DfGla 613 (746)
.++||||+++|+|. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||++
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~ 166 (321)
T 2a2a_A 90 VVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (321)
T ss_dssp EEEEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCTTC
T ss_pred EEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEccCccc
Confidence 99999999999986 45689999999999999999999999 999999999999999887 7999999999
Q ss_pred ccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 614 KFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
+...... ......||+.|+|||++.+..++. ++||||+||++|
T Consensus 167 ~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~---~~Di~slG~il~ 209 (321)
T 2a2a_A 167 HEIEDGV---------EFKNIFGTPEFVAPEIVNYEPLGL---EADMWSIGVITY 209 (321)
T ss_dssp EECCTTC---------CCCCCCSCGGGCCHHHHTTCCCCT---HHHHHHHHHHHH
T ss_pred eecCccc---------cccccCCCCCccCcccccCCCCCC---ccccHHHHHHHH
Confidence 8764321 123367999999999998877654 599999999998
No 162
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=99.97 E-value=2.1e-33 Score=302.73 Aligned_cols=183 Identities=18% Similarity=0.200 Sum_probs=147.3
Q ss_pred hhcCCCCCCeEeecCCeeEEE--------------EEeehhhhhhhh-----------hhHHHHHHHHHhhcCCCCceee
Q 041467 478 ATNNFSPANKIREGGFNIVYN--------------VAMKVANLKQKE-----------ASRSFAAEFNALRNIRHRNLIK 532 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~--------------vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~HpnIv~ 532 (746)
..++|+..+.||+|+||.||+ ||||++...... ....+.+|+..++.++|||||+
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~ 112 (364)
T 3op5_A 33 AAAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPK 112 (364)
T ss_dssp TCCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCC
T ss_pred CCCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCe
Confidence 456899999999999999997 689987543211 1123556777888999999999
Q ss_pred EEEEEecC----CcccchhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeC--
Q 041467 533 IITICSSI----DFEGFDFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLD-- 600 (746)
Q Consensus 533 l~~~~~~~----~~~~lv~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~-- 600 (746)
+++++... ...++||||+ +|+|. ...+++.++..++.||+.||+|||+. +|+||||||+|||++
T Consensus 113 ~~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~~~ 188 (364)
T 3op5_A 113 YWGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLNYK 188 (364)
T ss_dssp EEEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEESS
T ss_pred EEeeeeeccCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEecC
Confidence 99998875 4589999999 88886 25799999999999999999999999 999999999999998
Q ss_pred CCCcEEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 601 QDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 601 ~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.++.+||+|||+|+.+........ .........+||+.|||||++.+..++.+ +|||||||++|
T Consensus 189 ~~~~~kl~DFG~a~~~~~~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~---~Di~slG~~l~ 252 (364)
T 3op5_A 189 NPDQVYLVDYGLAYRYCPEGVHKA-YAADPKRCHDGTIEFTSIDAHNGVAPSRR---GDLEILGYCMI 252 (364)
T ss_dssp CTTCEEECCCTTCEESSGGGCCCC-SSCCSSCCCCCCTTTCCHHHHTTCCCCHH---HHHHHHHHHHH
T ss_pred CCCeEEEEECCcceecccCCcccc-cccCcccccCCCCCccCHHHhCCCCCCch---hhHHHHHHHHH
Confidence 889999999999987643322111 11112234679999999999998877554 99999999998
No 163
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=99.97 E-value=7.4e-33 Score=296.30 Aligned_cols=185 Identities=19% Similarity=0.301 Sum_probs=149.8
Q ss_pred HHhhhhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh-----hhhhHHHHHHHHHhhcCCCCceeeEEEEEec
Q 041467 474 ELSKATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ-----KEASRSFAAEFNALRNIRHRNLIKIITICSS 539 (746)
Q Consensus 474 ~~~~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~-----~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~ 539 (746)
++....++|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++|||||++++++.+
T Consensus 20 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~ 99 (345)
T 3hko_A 20 SLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYED 99 (345)
T ss_dssp CHHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred hhhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhcc
Confidence 4456678899999999999999996 8999886542 3345679999999999999999999999999
Q ss_pred CCcccchhhhccCCccccc---------------------------------------------CCCHHHHHHHHHHHHH
Q 041467 540 IDFEGFDFKAISNGQLRLC---------------------------------------------NLSLTQRVNIAIDVAF 574 (746)
Q Consensus 540 ~~~~~lv~e~~~~g~l~~~---------------------------------------------~l~~~~~~~i~~~i~~ 574 (746)
.+..++||||+++|+|... .+++..+..++.|++.
T Consensus 100 ~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~ 179 (345)
T 3hko_A 100 EQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFS 179 (345)
T ss_dssp SSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHH
Confidence 9999999999999988510 1256778899999999
Q ss_pred HHHHHHhcCCCCeEEcCCCCCCeeeCCCC--cEEEccccccccccCCCCCCCcccccccccccccccccccccccc--cc
Q 041467 575 AIEYLRHHCQPSIVHGDLKPSNILLDQDV--VTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAA--RN 650 (746)
Q Consensus 575 ~l~yLH~~~~~~ivHrDlkp~NILl~~~~--~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~ 650 (746)
||+|||+. +|+||||||+||+++.++ .+||+|||+|+.+...... .........||+.|+|||++.+ ..
T Consensus 180 ~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~ 252 (345)
T 3hko_A 180 ALHYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNG----EYYGMTTKAGTPYFVAPEVLNTTNES 252 (345)
T ss_dssp HHHHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC------------CCCGGGCCHHHHTCSSSC
T ss_pred HHHHHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCcc----ccccccccCCCccccCchhhccCCCC
Confidence 99999999 999999999999998766 8999999999876432221 1112334679999999999975 33
Q ss_pred cccCCCccceeeccceee
Q 041467 651 LENREKRHTVMSFPQRFA 668 (746)
Q Consensus 651 ~~~~~~~~DiwSlG~i~~ 668 (746)
+ +.++|||||||++|
T Consensus 253 ~---~~~~DiwslG~il~ 267 (345)
T 3hko_A 253 Y---GPKCDAWSAGVLLH 267 (345)
T ss_dssp C---CTHHHHHHHHHHHH
T ss_pred C---CcHHHHHHHHHHHH
Confidence 4 44699999999998
No 164
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=99.97 E-value=4.5e-33 Score=294.99 Aligned_cols=241 Identities=17% Similarity=0.233 Sum_probs=181.2
Q ss_pred ccHHHHhhhhcCCCCCCeEeecCCeeEEE--------------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEE
Q 041467 470 ISHAELSKATNNFSPANKIREGGFNIVYN--------------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKII 534 (746)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~ig~g~~g~v~~--------------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~ 534 (746)
+..+++....++|+..+.||+|+||.||+ ||||++.... ......+.+|++++++++||||++++
T Consensus 15 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~ 94 (322)
T 1p4o_A 15 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLL 94 (322)
T ss_dssp CCCCTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEE
T ss_pred cChhhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeE
Confidence 33455566678899999999999999995 8899886432 33455789999999999999999999
Q ss_pred EEEecCCcccchhhhccCCcccc---------------cCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeee
Q 041467 535 TICSSIDFEGFDFKAISNGQLRL---------------CNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL 599 (746)
Q Consensus 535 ~~~~~~~~~~lv~e~~~~g~l~~---------------~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl 599 (746)
+++.+.+..++||||+++|+|.. ..+++.++..++.|++.||+|||+. +|+||||||+||++
T Consensus 95 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli 171 (322)
T 1p4o_A 95 GVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMV 171 (322)
T ss_dssp EEECSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEE
T ss_pred EEEccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEE
Confidence 99999999999999999999861 3568999999999999999999999 99999999999999
Q ss_pred CCCCcEEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-cc-c--
Q 041467 600 DQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ-N-- 675 (746)
Q Consensus 600 ~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~-~-- 675 (746)
+.++.+||+|||+++....... ........||+.|+|||++.+..++.+ +||||+||++|.... .. .
T Consensus 172 ~~~~~~kl~Dfg~~~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~il~el~~~g~~p~~ 242 (322)
T 1p4o_A 172 AEDFTVKIGDFGMTRDIYETDY------YRKGGKGLLPVRWMSPESLKDGVFTTY---SDVWSFGVVLWEIATLAEQPYQ 242 (322)
T ss_dssp CTTCCEEECCTTCCCGGGGGGC------EEGGGSSEECGGGCCHHHHHHCCCCHH---HHHHHHHHHHHHHHHTSCCTTT
T ss_pred cCCCeEEECcCccccccccccc------cccccCCCCCCCccChhhhccCCCCch---hhHHHHHHHHHHHHhcCCCccc
Confidence 9999999999999986533211 111223567899999999988777554 999999999983221 10 0
Q ss_pred ----cc----hhh-ccccCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhcccCCC
Q 041467 676 ----KS----ILK-SAGIKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLRLPS 722 (746)
Q Consensus 676 ----~~----i~~-~~~~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~~~ 722 (746)
.. +.. ..........+.+..++..|+...|. ||+..++...++....
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~ 299 (322)
T 1p4o_A 243 GLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299 (322)
T ss_dssp TSCHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred cCCHHHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence 00 111 01111223334455555555555566 8888877766666543
No 165
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=99.97 E-value=1e-33 Score=301.01 Aligned_cols=180 Identities=19% Similarity=0.283 Sum_probs=151.4
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcC-CCCceeeEEEEEecCCcccchhh
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNI-RHRNLIKIITICSSIDFEGFDFK 548 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~~~~~~lv~e 548 (746)
.++|+..+.||+|+||.||+ ||||++.... ..+.+.+|+++++++ +||||+++++++...+..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e 85 (330)
T 2izr_A 8 GPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKS--RAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE 85 (330)
T ss_dssp TTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTC--SSCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred cCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEecccc--chHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence 36789999999999999997 8999876432 234588999999999 89999999999999999999999
Q ss_pred hccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCc-----EEEcccccccccc
Q 041467 549 AISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVV-----THVGDLGLAKFLY 617 (746)
Q Consensus 549 ~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~-----~ki~DfGla~~~~ 617 (746)
|+ +|+|. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||+|+...
T Consensus 86 ~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~ 161 (330)
T 2izr_A 86 LL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYI 161 (330)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESB
T ss_pred eC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEcccceeee
Confidence 99 88875 35799999999999999999999999 9999999999999998887 9999999998764
Q ss_pred CCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 618 GYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
....... .........+||+.|+|||++.+..++.+ +|||||||++|
T Consensus 162 ~~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~---~Di~slG~il~ 208 (330)
T 2izr_A 162 DPETKKH-IPYREHKSLTGTARYMSINTHLGKEQSRR---DDLEALGHMFM 208 (330)
T ss_dssp CTTTCCB-CCCCCCCCCCSCTTTCCHHHHTTCCCCHH---HHHHHHHHHHH
T ss_pred cCCCCcc-ccccccCCcCCCccccChHHHcCCCCCch---hHHHHHHHHHH
Confidence 4322110 01112345789999999999998877554 99999999998
No 166
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=99.97 E-value=2.5e-32 Score=289.37 Aligned_cols=167 Identities=20% Similarity=0.277 Sum_probs=128.5
Q ss_pred CCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCC-CCceeeEEEEEecCCcccchhhhccCCc
Q 041467 485 ANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIR-HRNLIKIITICSSIDFEGFDFKAISNGQ 554 (746)
Q Consensus 485 ~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~-HpnIv~l~~~~~~~~~~~lv~e~~~~g~ 554 (746)
.+.||+|+||.||+ ||||++... ....+.+|+++++.+. |||||++++++.+....++||||+++|+
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 92 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE 92 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence 47899999999997 899998633 3456789999999997 9999999999999999999999999999
Q ss_pred cc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCC---cEEEccccccccccCCCCCCCcc
Q 041467 555 LR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDV---VTHVGDLGLAKFLYGYEPGTTAE 626 (746)
Q Consensus 555 l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~---~~ki~DfGla~~~~~~~~~~~~~ 626 (746)
+. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||+++......
T Consensus 93 L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~------ 163 (325)
T 3kn6_A 93 LFERIKKKKHFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN------ 163 (325)
T ss_dssp HHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC--------
T ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCCCC------
Confidence 85 45789999999999999999999999 999999999999997665 89999999998653221
Q ss_pred cccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 627 TASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 627 ~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......+||+.|+|||++.+..++.+ +||||+||++|
T Consensus 164 --~~~~~~~~t~~y~aPE~~~~~~~~~~---~DiwslG~il~ 200 (325)
T 3kn6_A 164 --QPLKTPCFTLHYAAPELLNQNGYDES---CDLWSLGVILY 200 (325)
T ss_dssp ----------------------CCCCHH---HHHHHHHHHHH
T ss_pred --CcccccCCCcCccCHHHhcCCCCCCc---cchHHHHHHHH
Confidence 12234678999999999988877654 99999999998
No 167
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=99.97 E-value=1.1e-32 Score=286.48 Aligned_cols=174 Identities=18% Similarity=0.301 Sum_probs=152.0
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccch
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
.++|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 13 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 92 (284)
T 2vgo_A 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLM 92 (284)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEE
Confidence 46789999999999999997 8999886442 22346789999999999999999999999999999999
Q ss_pred hhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCC
Q 041467 547 FKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 547 ~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~ 621 (746)
|||+++|++. ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 93 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~-- 167 (284)
T 2vgo_A 93 LEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL-- 167 (284)
T ss_dssp ECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECSSS--
T ss_pred EEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCccc--
Confidence 9999999885 45689999999999999999999999 9999999999999999999999999998764321
Q ss_pred CCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......||+.|+|||++.+..++.+ +||||+||++|
T Consensus 168 --------~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~il~ 203 (284)
T 2vgo_A 168 --------RRRTMCGTLDYLPPEMIEGKTHDEK---VDLWCAGVLCY 203 (284)
T ss_dssp --------CBCCCCSCGGGCCHHHHTTCCBCTT---HHHHHHHHHHH
T ss_pred --------ccccccCCCCcCCHHHhccCCCCcc---cchhhHHHHHH
Confidence 1123678999999999988776554 99999999998
No 168
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=4.3e-33 Score=298.18 Aligned_cols=178 Identities=24% Similarity=0.326 Sum_probs=143.3
Q ss_pred hhhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhh-----hhhHHHHHHHHHhhcCCCCceeeEEEEEecCCc
Q 041467 477 KATNNFSPANKIREGGFNIVYN---------VAMKVANLKQK-----EASRSFAAEFNALRNIRHRNLIKIITICSSIDF 542 (746)
Q Consensus 477 ~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~-----~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~ 542 (746)
...++|+..+.||+|+||.||+ ||||++..... ...+.+.+|++++++++|||||++++++.+.+.
T Consensus 7 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 86 (346)
T 1ua2_A 7 SRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSN 86 (346)
T ss_dssp ------CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTC
T ss_pred HHhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCc
Confidence 3457899999999999999997 89999865322 123468899999999999999999999999999
Q ss_pred ccchhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccc
Q 041467 543 EGFDFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFL 616 (746)
Q Consensus 543 ~~lv~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~ 616 (746)
.++||||+.+ ++. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+|+..
T Consensus 87 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~ 162 (346)
T 1ua2_A 87 ISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKSF 162 (346)
T ss_dssp CEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGSTT
T ss_pred eEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEecccceec
Confidence 9999999986 443 34589999999999999999999999 9999999999999999999999999999876
Q ss_pred cCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 617 YGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.... ......+||+.|+|||++.+... ++.++||||+||++|
T Consensus 163 ~~~~--------~~~~~~~~t~~y~aPE~~~~~~~--~~~~~DiwslG~il~ 204 (346)
T 1ua2_A 163 GSPN--------RAYTHQVVTRWYRAPELLFGARM--YGVGVDMWAVGCILA 204 (346)
T ss_dssp TSCC--------CCCCCSCCCCTTCCHHHHTTCSC--CCHHHHHHHHHHHHH
T ss_pred cCCc--------ccCCcccccccccCchHhhCCCC--CCchhhhHhHHHHHH
Confidence 3221 12234678999999999976542 233599999999998
No 169
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=99.97 E-value=6.3e-33 Score=299.74 Aligned_cols=176 Identities=19% Similarity=0.232 Sum_probs=141.1
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhh--hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCC-----
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLK--QKEASRSFAAEFNALRNIRHRNLIKIITICSSID----- 541 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~----- 541 (746)
..++|+..+.||+|+||.||+ ||||++... .....+.+.+|+.+++.++|||||++++++...+
T Consensus 23 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 102 (371)
T 2xrw_A 23 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 102 (371)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTC
T ss_pred hhhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccc
Confidence 356899999999999999996 899998643 2344567889999999999999999999998765
Q ss_pred -cccchhhhccCCccc--ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccC
Q 041467 542 -FEGFDFKAISNGQLR--LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618 (746)
Q Consensus 542 -~~~lv~e~~~~g~l~--~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~ 618 (746)
..++||||+.++... ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+|+....
T Consensus 103 ~~~~lv~e~~~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~ 179 (371)
T 2xrw_A 103 QDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 179 (371)
T ss_dssp CEEEEEEECCSEEHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC------
T ss_pred cceEEEEEcCCCCHHHHHhhccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeeccccccc
Confidence 579999999754332 45689999999999999999999999 999999999999999999999999999986532
Q ss_pred CCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 619 YEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 619 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
. ......+||+.|+|||++.+..++. ++||||+||++|
T Consensus 180 ~---------~~~~~~~gt~~y~aPE~~~~~~~~~---~~DiwslG~il~ 217 (371)
T 2xrw_A 180 S---------FMMTPYVVTRYYRAPEVILGMGYKE---NVDIWSVGCIMG 217 (371)
T ss_dssp -------------------CTTCCHHHHTTCCCCT---THHHHHHHHHHH
T ss_pred c---------cccCCceecCCccCHHHhcCCCCCc---hHhHHHHHHHHH
Confidence 1 1223467999999999999877655 499999999998
No 170
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=4.8e-33 Score=297.63 Aligned_cols=235 Identities=18% Similarity=0.190 Sum_probs=175.1
Q ss_pred hhhhcCCCCCCeEeecCCeeEEE--------------EEeehhhhhh-hhhhHHHHHHHHHhhcC-CCCceeeEEEEEec
Q 041467 476 SKATNNFSPANKIREGGFNIVYN--------------VAMKVANLKQ-KEASRSFAAEFNALRNI-RHRNLIKIITICSS 539 (746)
Q Consensus 476 ~~~~~~~~~~~~ig~g~~g~v~~--------------vavK~~~~~~-~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~ 539 (746)
....++|+..+.||+|+||.||+ ||||++.... ....+.+.+|+++++++ +||||+++++++..
T Consensus 41 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 120 (344)
T 1rjb_A 41 EFPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTL 120 (344)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred ccCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEee
Confidence 34557899999999999999995 8999886442 33456799999999999 89999999999999
Q ss_pred CCcccchhhhccCCccc-----c-----------------------cCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcC
Q 041467 540 IDFEGFDFKAISNGQLR-----L-----------------------CNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGD 591 (746)
Q Consensus 540 ~~~~~lv~e~~~~g~l~-----~-----------------------~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrD 591 (746)
.+..++||||+++|+|. . ..+++.++..++.|++.||+|||+. +|+|||
T Consensus 121 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~D 197 (344)
T 1rjb_A 121 SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRD 197 (344)
T ss_dssp SSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETT
T ss_pred CCccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccCC
Confidence 99999999999999985 1 1278999999999999999999999 999999
Q ss_pred CCCCCeeeCCCCcEEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeeccc
Q 041467 592 LKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNE 671 (746)
Q Consensus 592 lkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~ 671 (746)
|||+||+++.++.+||+|||+++....... ........||+.|+|||++.+..++.+ +|||||||++|...
T Consensus 198 ikp~NIll~~~~~~kL~Dfg~~~~~~~~~~------~~~~~~~~~t~~y~aPE~~~~~~~~~~---~Di~slG~il~el~ 268 (344)
T 1rjb_A 198 LAARNVLVTHGKVVKICDFGLARDIMSDSN------YVVRGNARLPVKWMAPESLFEGIYTIK---SDVWSYGILLWEIF 268 (344)
T ss_dssp CSGGGEEEETTTEEEECCCGGGSCGGGCTT------SEEETTEEECGGGCCHHHHHHCCCCHH---HHHHHHHHHHHHHT
T ss_pred CChhhEEEcCCCcEEeCCCccCcccccCcc------ceeccCccCccCccCHHHhccCCCChh---HhHHHHHHHHHHHH
Confidence 999999999999999999999987643321 112234567889999999988776554 99999999998322
Q ss_pred c-cc--------cc---chhhc--cccCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhcccCCC
Q 041467 672 K-KQ--------NK---SILKS--AGIKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLRLPS 722 (746)
Q Consensus 672 ~-~~--------~~---~i~~~--~~~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~~~ 722 (746)
. .. .. .+... .........+.+..++..|+...|. ||+..++...+..+..
T Consensus 269 t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~~ 334 (344)
T 1rjb_A 269 SLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQLA 334 (344)
T ss_dssp TTSCCSSTTCCCSHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC-
T ss_pred cCCCCCcccCCcHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHHH
Confidence 1 11 00 01111 1111122344555555555666666 8888877766655443
No 171
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.97 E-value=3.3e-30 Score=273.89 Aligned_cols=268 Identities=19% Similarity=0.271 Sum_probs=173.8
Q ss_pred ccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEc
Q 041467 18 TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRI 97 (746)
Q Consensus 18 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 97 (746)
.++++++++++.++ .+|..+. ++|++|+|++|++++..+..|+++++|++|+|++|.+.+..|..+.++++|++|++
T Consensus 31 c~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (330)
T 1xku_A 31 CHLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYL 107 (330)
T ss_dssp EETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEEC
T ss_pred CCCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEEC
Confidence 47999999999997 6777664 68999999999999877778999999999999999998777777666666666655
Q ss_pred cCCCCcCcccCCCCCCEEeccCCCccccc--CCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccc
Q 041467 98 DCGGRIDSLGHLKSLLLLSLAFNQFLSLS--NASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDF 175 (746)
Q Consensus 98 ~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~--~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 175 (746)
++ |++..++ -.++|+.|++++|++++..+..|..+++|++|++++|.++... ..
T Consensus 108 s~--------------------n~l~~l~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~----~~ 163 (330)
T 1xku_A 108 SK--------------------NQLKELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSG----IE 163 (330)
T ss_dssp CS--------------------SCCSBCCSSCCTTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGG----BC
T ss_pred CC--------------------CcCCccChhhcccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccC----cC
Confidence 54 4443322 1245666666666666655556666666666666666664211 12
Q ss_pred cccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCC
Q 041467 176 INLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGET 255 (746)
Q Consensus 176 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 255 (746)
+..+.++++|++|++++|.++ .+|..+. .+|+.|++++|++++..|..|..+++|++|+|++|++.+..+..+..+
T Consensus 164 ~~~~~~l~~L~~L~l~~n~l~-~l~~~~~---~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l 239 (330)
T 1xku_A 164 NGAFQGMKKLSYIRIADTNIT-TIPQGLP---PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANT 239 (330)
T ss_dssp TTGGGGCTTCCEEECCSSCCC-SCCSSCC---TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGS
T ss_pred hhhccCCCCcCEEECCCCccc-cCCcccc---ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCC
Confidence 344556666666666666665 3444332 256666666666666556666666666666666666666655566666
Q ss_pred CCCceeecccccccccccccccccChHHhhhccCCCCCCccccCCCCCCeeeecCCcCccccchhhhhc------ccccc
Q 041467 256 PNLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSV------TTLSL 329 (746)
Q Consensus 256 ~~L~~L~Ls~N~l~~~~~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l------~~l~~ 329 (746)
++|++|+|++|+++ .+|..+..+++|++|++++|+|++..+..+... ..+ .
T Consensus 240 ~~L~~L~L~~N~l~----------------------~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l-~ 296 (330)
T 1xku_A 240 PHLRELHLNNNKLV----------------------KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASY-S 296 (330)
T ss_dssp TTCCEEECCSSCCS----------------------SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCC-S
T ss_pred CCCCEEECCCCcCc----------------------cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccc-c
Confidence 66666666666655 344455566666666666666664333333221 333 3
Q ss_pred eEEccCcccc
Q 041467 330 YLELDNNLLN 339 (746)
Q Consensus 330 ~L~Ls~N~l~ 339 (746)
.|++++|++.
T Consensus 297 ~l~l~~N~~~ 306 (330)
T 1xku_A 297 GVSLFSNPVQ 306 (330)
T ss_dssp EEECCSSSSC
T ss_pred ceEeecCccc
Confidence 5666666664
No 172
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=99.97 E-value=1.2e-32 Score=284.89 Aligned_cols=179 Identities=21% Similarity=0.306 Sum_probs=153.0
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhh
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFK 548 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e 548 (746)
.++|+..+.||+|+||.||+ ||||++.... ....+.+.+|+++++.++||||+++++++.+.+..++|||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence 46789999999999999996 8999986543 3345678999999999999999999999999999999999
Q ss_pred hccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCC
Q 041467 549 AISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623 (746)
Q Consensus 549 ~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~ 623 (746)
|+++|++. ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 86 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~-- 160 (276)
T 2yex_A 86 YCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR-- 160 (276)
T ss_dssp CCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTE--
T ss_pred ecCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccccCCCcc--
Confidence 99998886 34689999999999999999999999 999999999999999999999999999986532211
Q ss_pred CcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 624 TAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 624 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
........||+.|+|||++.+..+. +.++||||+||++|
T Consensus 161 ----~~~~~~~~~~~~y~aPE~~~~~~~~--~~~~Di~slG~il~ 199 (276)
T 2yex_A 161 ----ERLLNKMCGTLPYVAPELLKRREFH--AEPVDVWSCGIVLT 199 (276)
T ss_dssp ----ECCBCCCCSCGGGCCGGGGTCSSBC--HHHHHHHHHHHHHH
T ss_pred ----hhcccCCccccCccChHHHhcCCCC--CCcchHHHHHHHHH
Confidence 1122346799999999999876652 23599999999998
No 173
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=99.97 E-value=3.4e-33 Score=297.79 Aligned_cols=190 Identities=22% Similarity=0.297 Sum_probs=143.6
Q ss_pred hhcCCCCCCeEeecCCeeEEE-------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEec-----CCcccc
Q 041467 478 ATNNFSPANKIREGGFNIVYN-------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSS-----IDFEGF 545 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~-------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-----~~~~~l 545 (746)
..++|+..+.||+|+||.||+ ||||++...... .....+|+..++.++||||+++++++.. ....++
T Consensus 11 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~~~~-~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~l 89 (336)
T 3g2f_A 11 DLDNLKLLELIGRGRYGAVYKGSLDERPVAVKVFSFANRQ-NFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLL 89 (336)
T ss_dssp CTTSEEEEEEEEECSSEEEEEEEETTEEEEEEEEEGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEE
T ss_pred ChHHhheeeecccCCCeEEEEEEECCeEEEEEEeeccchh-hHHHHHHHHHHHhccCcchhhheecccccccCCCceEEE
Confidence 457899999999999999997 999998644322 1122345555667999999999986543 224689
Q ss_pred hhhhccCCccc----ccCCCHHHHHHHHHHHHHHHHHHHhcC------CCCeEEcCCCCCCeeeCCCCcEEEcccccccc
Q 041467 546 DFKAISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHHC------QPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615 (746)
Q Consensus 546 v~e~~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~~------~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~ 615 (746)
||||+++|+|. ....++..+..++.||+.||+|||+.+ .++|+||||||+|||++.++.+||+|||+|+.
T Consensus 90 v~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~a~~ 169 (336)
T 3g2f_A 90 VMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMR 169 (336)
T ss_dssp EECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEecCCCCcHHHHHhhcccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeeccceee
Confidence 99999999986 456799999999999999999999873 33899999999999999999999999999987
Q ss_pred ccCCCCCCCccccccccccccccccccccccccccc----ccCCCccceeeccceee
Q 041467 616 LYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNL----ENREKRHTVMSFPQRFA 668 (746)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~----~~~~~~~DiwSlG~i~~ 668 (746)
+..................+||+.|+|||++.+... ..++.++|||||||++|
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ 226 (336)
T 3g2f_A 170 LTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYW 226 (336)
T ss_dssp CSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHH
T ss_pred cccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHH
Confidence 654332211111222335679999999999987311 11234599999999998
No 174
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=99.97 E-value=5.6e-33 Score=289.13 Aligned_cols=223 Identities=22% Similarity=0.298 Sum_probs=164.1
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhhh-------hhhHHHHHHHHHhhcCCCCceeeEEEEEecCCc
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQK-------EASRSFAAEFNALRNIRHRNLIKIITICSSIDF 542 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~-------~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~ 542 (746)
.++|+..+.||+|+||.||+ ||||++..... ...+.+.+|++++++++||||+++++++.+..
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~- 96 (287)
T 4f0f_A 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP- 96 (287)
T ss_dssp STTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT-
T ss_pred hccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC-
Confidence 46788999999999999996 89998854321 12267999999999999999999999987654
Q ss_pred ccchhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEEcCCCCCCeeeCCCCc-----EEEcc
Q 041467 543 EGFDFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPS--IVHGDLKPSNILLDQDVV-----THVGD 609 (746)
Q Consensus 543 ~~lv~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~--ivHrDlkp~NILl~~~~~-----~ki~D 609 (746)
++||||+++|++. ...+++..+..++.|++.|++|||+. + |+||||||+||+++.++. +||+|
T Consensus 97 -~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~kl~D 172 (287)
T 4f0f_A 97 -RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAKVAD 172 (287)
T ss_dssp -EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEEECC
T ss_pred -eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEEeCC
Confidence 6999999999884 44689999999999999999999999 7 999999999999987776 99999
Q ss_pred ccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccccc-------------cc
Q 041467 610 LGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEKKQ-------------NK 676 (746)
Q Consensus 610 fGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~~~-------------~~ 676 (746)
||+++.... ......||+.|+|||++.+... .++.++||||+||++|...... ..
T Consensus 173 fg~~~~~~~-----------~~~~~~g~~~y~aPE~~~~~~~-~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~ 240 (287)
T 4f0f_A 173 FGLSQQSVH-----------SVSGLLGNFQWMAPETIGAEEE-SYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFIN 240 (287)
T ss_dssp CTTCBCCSS-----------CEECCCCCCTTSCGGGSSCSSC-EECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHH
T ss_pred CCccccccc-----------cccccCCCccccCchhhccCCC-CcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHH
Confidence 999975321 1233679999999999843321 1234599999999998221110 00
Q ss_pred chhh--ccccCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhcc
Q 041467 677 SILK--SAGIKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGL 718 (746)
Q Consensus 677 ~i~~--~~~~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~ 718 (746)
.+.. ..+.......+.+..++..|+...|. ||+..++...++
T Consensus 241 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~ 285 (287)
T 4f0f_A 241 MIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELS 285 (287)
T ss_dssp HHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHhccCCCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 0011 11112233344455555555555666 777776654443
No 175
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=99.97 E-value=4.1e-33 Score=293.11 Aligned_cols=222 Identities=19% Similarity=0.272 Sum_probs=159.9
Q ss_pred hcCCCCCCeEeecCCeeEEE-------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhcc
Q 041467 479 TNNFSPANKIREGGFNIVYN-------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAIS 551 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~-------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~~ 551 (746)
.++|+..+.||+|+||.||+ ||||++... ...+.+.+|++++++++|||||++++++.+ ..++||||++
T Consensus 7 ~~~~~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--~~~lv~e~~~ 82 (307)
T 2eva_A 7 YKEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLN--PVCLVMEYAE 82 (307)
T ss_dssp GGGEEEEEEEECCSSSEEEEEEETTEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTT--TTEEEEECCT
T ss_pred HhHeeeeeEeecCCCceEEEEEECCeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcC--CcEEEEEcCC
Confidence 35688899999999999997 899998632 345679999999999999999999998874 5789999999
Q ss_pred CCccc--------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCc-EEEccccccccccCCCCC
Q 041467 552 NGQLR--------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVV-THVGDLGLAKFLYGYEPG 622 (746)
Q Consensus 552 ~g~l~--------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~-~ki~DfGla~~~~~~~~~ 622 (746)
+|+|. ...+++.++..++.|+++|++|||+.+..+|+||||||+||+++.++. +||+|||+++.....
T Consensus 83 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~--- 159 (307)
T 2eva_A 83 GGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH--- 159 (307)
T ss_dssp TCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC----------
T ss_pred CCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc---
Confidence 99985 124688999999999999999999943239999999999999988876 799999999765221
Q ss_pred CCcccccccccccccccccccccccccccccCCCccceeeccceeecccccc---------ccchh----h-ccccCCCc
Q 041467 623 TTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEKKQ---------NKSIL----K-SAGIKGKK 688 (746)
Q Consensus 623 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~~~---------~~~i~----~-~~~~~~~~ 688 (746)
.....||+.|+|||++.+..++. ++|||||||++|...... ...+. . ..+.....
T Consensus 160 --------~~~~~gt~~y~aPE~~~~~~~~~---~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (307)
T 2eva_A 160 --------MTNNKGSAAWMAPEVFEGSNYSE---KCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKN 228 (307)
T ss_dssp -------------CCTTSSCHHHHTCCCCCT---HHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCCCCCBTT
T ss_pred --------cccCCCCCceEChhhhCCCCCCc---HHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCCCCcccc
Confidence 12356899999999998877654 599999999998221111 00000 0 01111123
Q ss_pred cHHHHHHhhCCCCCCCCC-CCCccchhhhcc
Q 041467 689 TVSFFLSLLSPSCSVFPL-TPSSNSFTLLGL 718 (746)
Q Consensus 689 ~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~ 718 (746)
..+.+..++..|+...|. ||++.++...+.
T Consensus 229 ~~~~l~~li~~~l~~dp~~Rps~~ell~~L~ 259 (307)
T 2eva_A 229 LPKPIESLMTRCWSKDPSQRPSMEEIVKIMT 259 (307)
T ss_dssp CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred cCHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 334455555555555666 788876665444
No 176
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=99.97 E-value=4.3e-33 Score=291.66 Aligned_cols=232 Identities=19% Similarity=0.236 Sum_probs=169.7
Q ss_pred hhcCCCCCCeEeecCCeeEEE------------EEeehhhhh-hhhhhHHHHHHHHHhhcCCCCceeeEEEEEec-CCcc
Q 041467 478 ATNNFSPANKIREGGFNIVYN------------VAMKVANLK-QKEASRSFAAEFNALRNIRHRNLIKIITICSS-IDFE 543 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~------------vavK~~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~-~~~~ 543 (746)
....|+..+.||+|+||.||+ ||+|++... .....+.+.+|++++++++||||+++++++.. .+..
T Consensus 23 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 102 (298)
T 3f66_A 23 SSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSP 102 (298)
T ss_dssp GGEEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCC
T ss_pred cceehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCce
Confidence 345688899999999999995 688887643 23445679999999999999999999998654 5578
Q ss_pred cchhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccccccccc
Q 041467 544 GFDFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617 (746)
Q Consensus 544 ~lv~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~ 617 (746)
++||||+++|+|. ...+++.++..++.|++.|++|||++ +|+||||||+||+++.++.+||+|||+|+...
T Consensus 103 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~ 179 (298)
T 3f66_A 103 LVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMY 179 (298)
T ss_dssp EEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGCCCS
T ss_pred EEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECccccccccc
Confidence 8999999999986 34589999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-cc-----------ccchhhc-ccc
Q 041467 618 GYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ-----------NKSILKS-AGI 684 (746)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~-----------~~~i~~~-~~~ 684 (746)
..... .........||+.|+|||++.+..++.+ +||||+||++|.... .. ...+... ...
T Consensus 180 ~~~~~----~~~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (298)
T 3f66_A 180 DKEYY----SVHNKTGAKLPVKWMALESLQTQKFTTK---SDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLL 252 (298)
T ss_dssp CGGGC----BC-----CCBCGGGSCHHHHHHCCCCHH---HHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTTCCCC
T ss_pred ccchh----ccccccCCCCCccccChHHhcCCCCChH---HHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcCCCCC
Confidence 32211 1122334678899999999988877655 999999999982211 10 0001111 111
Q ss_pred CCCccHHHHHHhhCCCCCCCCC-CCCccchhhhccc
Q 041467 685 KGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLR 719 (746)
Q Consensus 685 ~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~ 719 (746)
......+.+..++..|+...|. ||+..++...++.
T Consensus 253 ~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~ 288 (298)
T 3f66_A 253 QPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISA 288 (298)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 1122334444455555555555 7787766655544
No 177
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=99.97 E-value=5.2e-33 Score=293.81 Aligned_cols=244 Identities=20% Similarity=0.194 Sum_probs=175.1
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEec----CCccc
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSS----IDFEG 544 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~----~~~~~ 544 (746)
..++|+..+.||+|+||.||+ ||||++........+.+.+|++++++++||||+++++++.. ....+
T Consensus 27 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 106 (317)
T 2buj_A 27 DNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAW 106 (317)
T ss_dssp TTEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEE
T ss_pred CCeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeE
Confidence 346799999999999999997 89998865555566789999999999999999999999873 34788
Q ss_pred chhhhccCCccc---------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccccccc
Q 041467 545 FDFKAISNGQLR---------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615 (746)
Q Consensus 545 lv~e~~~~g~l~---------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~ 615 (746)
+||||+.+|+|. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 107 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~ 183 (317)
T 2buj_A 107 LLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMNQ 183 (317)
T ss_dssp EEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSCEE
T ss_pred EEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcchh
Confidence 999999999985 35689999999999999999999999 999999999999999999999999999876
Q ss_pred ccCCCCCCC-cccccccccccccccccccccccccccccCCCccceeeccceeecccccc------------ccchhh-c
Q 041467 616 LYGYEPGTT-AETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEKKQ------------NKSILK-S 681 (746)
Q Consensus 616 ~~~~~~~~~-~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~~~------------~~~i~~-~ 681 (746)
......... ...........||+.|+|||++.+.....++.++|||||||++|...... ...... .
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~ 263 (317)
T 2buj_A 184 ACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQ 263 (317)
T ss_dssp SCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHCC
T ss_pred cccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhcc
Confidence 422111000 00001122356899999999998765433455799999999998221111 000000 0
Q ss_pred ccc-CCCccHHHHHHhhCCCCCCCCC-CCCccchhhhcccCCCCC
Q 041467 682 AGI-KGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLRLPSRS 724 (746)
Q Consensus 682 ~~~-~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~~~~~ 724 (746)
... ......+.+..++..|+...|. ||+..++...++.+..+.
T Consensus 264 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~ 308 (317)
T 2buj_A 264 LSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPA 308 (317)
T ss_dssp --CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCC
T ss_pred CCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCC
Confidence 011 1122334444555555555566 888888777766655443
No 178
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=7.3e-33 Score=294.68 Aligned_cols=230 Identities=22% Similarity=0.248 Sum_probs=168.8
Q ss_pred cCCCCCCeEeecCCeeEEE-------------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccc
Q 041467 480 NNFSPANKIREGGFNIVYN-------------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~-------------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~l 545 (746)
.+|+..+.||+|+||.||+ ||||++.... ......+.+|++++++++||||+++++++...+..++
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 123 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI 123 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence 4677789999999999996 7899886432 3345578999999999999999999999999999999
Q ss_pred hhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCC
Q 041467 546 DFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGY 619 (746)
Q Consensus 546 v~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~ 619 (746)
||||+++|+|. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 124 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~ 200 (333)
T 1mqb_A 124 ITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 200 (333)
T ss_dssp EEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC-------
T ss_pred EEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcchhhccc
Confidence 99999999886 35689999999999999999999999 9999999999999999999999999999876432
Q ss_pred CCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc--ccc----------cchhhc-cccCC
Q 041467 620 EPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK--KQN----------KSILKS-AGIKG 686 (746)
Q Consensus 620 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~--~~~----------~~i~~~-~~~~~ 686 (746)
... ........||+.|+|||++.+..++.+ +||||+||++|.... ... ..+... .....
T Consensus 201 ~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~~ 272 (333)
T 1mqb_A 201 PEA-----TYTTSGGKIPIRWTAPEAISYRKFTSA---SDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTP 272 (333)
T ss_dssp ---------------CCCGGGSCHHHHHSCCCCHH---HHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCC
T ss_pred ccc-----ccccCCCCccccccCchhcccCCCCch---hhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHCCCcCCCc
Confidence 211 111223456889999999988777654 999999999983211 110 011111 11112
Q ss_pred CccHHHHHHhhCCCCCCCCC-CCCccchhhhcccC
Q 041467 687 KKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLRL 720 (746)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~ 720 (746)
....+.+..++..|+...|. ||+..++...++++
T Consensus 273 ~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~ 307 (333)
T 1mqb_A 273 MDCPSAIYQLMMQCWQQERARRPKFADIVSILDKL 307 (333)
T ss_dssp TTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred ccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 23445566666666666666 88888776655543
No 179
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=99.97 E-value=5.5e-33 Score=298.09 Aligned_cols=182 Identities=19% Similarity=0.282 Sum_probs=149.5
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecC------
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSI------ 540 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~------ 540 (746)
..++|+..+.||+|+||.||+ ||||++.... ......+.+|+++++.++||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 94 (351)
T 3mi9_A 15 EVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNR 94 (351)
T ss_dssp BGGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC------
T ss_pred cccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeecccccccc
Confidence 356899999999999999997 8999875443 22345788999999999999999999999874
Q ss_pred --CcccchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccccc
Q 041467 541 --DFEGFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLA 613 (746)
Q Consensus 541 --~~~~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla 613 (746)
+..++||||+.++... ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+|
T Consensus 95 ~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a 171 (351)
T 3mi9_A 95 CKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLA 171 (351)
T ss_dssp --CEEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTC
T ss_pred CCceEEEEEeccCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccchhc
Confidence 3578999999853332 35689999999999999999999999 9999999999999999999999999999
Q ss_pred ccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 614 KFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
+.+...... .........||+.|+|||++.+... ++.++||||+||++|
T Consensus 172 ~~~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~--~~~~~DiwslG~il~ 220 (351)
T 3mi9_A 172 RAFSLAKNS----QPNRYTNRVVTLWYRPPELLLGERD--YGPPIDLWGAGCIMA 220 (351)
T ss_dssp EECCCCSSS----SCCCCCSSCSCGGGCCHHHHTTCCS--CCTHHHHHHHHHHHH
T ss_pred ccccccccc----cccccCCcccccCccCchhhcCCCC--CCcHhHHHHHHHHHH
Confidence 876433221 1122345679999999999976432 234699999999998
No 180
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=99.97 E-value=2.7e-33 Score=303.41 Aligned_cols=172 Identities=16% Similarity=0.194 Sum_probs=140.1
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhh---hhhhhHHHHHHH---HHhhcCCCCceeeEE-------E
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLK---QKEASRSFAAEF---NALRNIRHRNLIKII-------T 535 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~---~~~~~~~~~~E~---~~l~~l~HpnIv~l~-------~ 535 (746)
..++|+..+.||+|+||.||+ ||||++... .....+.+.+|+ +++++++|||||+++ +
T Consensus 71 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~ 150 (377)
T 3byv_A 71 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD 150 (377)
T ss_dssp CCEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSE
T ss_pred CCceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhh
Confidence 356788899999999999997 999998633 234557799999 566666899999998 6
Q ss_pred EEecCC-----------------cccchhhhccCCccc-----ccCCC-------HHHHHHHHHHHHHHHHHHHhcCCCC
Q 041467 536 ICSSID-----------------FEGFDFKAISNGQLR-----LCNLS-------LTQRVNIAIDVAFAIEYLRHHCQPS 586 (746)
Q Consensus 536 ~~~~~~-----------------~~~lv~e~~~~g~l~-----~~~l~-------~~~~~~i~~~i~~~l~yLH~~~~~~ 586 (746)
++.+.+ ..++||||+ +|+|. ...++ +..+..++.||+.||+|||++ +
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ 226 (377)
T 3byv_A 151 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---G 226 (377)
T ss_dssp EEECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred hhhccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---C
Confidence 665543 278999999 67875 12233 488889999999999999999 9
Q ss_pred eEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCccccccccccccccccccccccccc-----------ccccCC
Q 041467 587 IVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAAR-----------NLENRE 655 (746)
Q Consensus 587 ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-----------~~~~~~ 655 (746)
|+||||||+|||++.++.+||+|||+|+... ......+| +.|+|||++.+. .++.
T Consensus 227 ivHrDikp~NIll~~~~~~kL~DFG~a~~~~-----------~~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~-- 292 (377)
T 3byv_A 227 LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDG-----------ARVVSSVS-RGFEPPELEARRATISYHRDRRTLMTF-- 292 (377)
T ss_dssp EECSCCCGGGEEECTTCCEEECCGGGCEETT-----------CEEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCH--
T ss_pred eecCCCCHHHEEEcCCCCEEEEechhheecC-----------CcccCCCC-cCccChhhhcccccccccccccccCCh--
Confidence 9999999999999999999999999998531 12234678 999999999877 5544
Q ss_pred Cccceeeccceee
Q 041467 656 KRHTVMSFPQRFA 668 (746)
Q Consensus 656 ~~~DiwSlG~i~~ 668 (746)
++|||||||++|
T Consensus 293 -~~DvwSlG~il~ 304 (377)
T 3byv_A 293 -SFDAWALGLVIY 304 (377)
T ss_dssp -HHHHHHHHHHHH
T ss_pred -hhhHHHHHHHHH
Confidence 599999999998
No 181
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=99.97 E-value=1.2e-32 Score=300.21 Aligned_cols=170 Identities=19% Similarity=0.242 Sum_probs=136.7
Q ss_pred hcCCCCC-CeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHh-hcCCCCceeeEEEEEec----CCcc
Q 041467 479 TNNFSPA-NKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNAL-RNIRHRNLIKIITICSS----IDFE 543 (746)
Q Consensus 479 ~~~~~~~-~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l-~~l~HpnIv~l~~~~~~----~~~~ 543 (746)
.++|... +.||+|+||.||+ ||||++.. ...+.+|++++ +..+|||||++++++.. ....
T Consensus 60 ~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-----~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~ 134 (400)
T 1nxk_A 60 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 134 (400)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred cccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc-----chhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEE
Confidence 3456665 6899999999996 89999852 23577888887 45589999999999875 5578
Q ss_pred cchhhhccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCC---CCcEEEcccccc
Q 041467 544 GFDFKAISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQ---DVVTHVGDLGLA 613 (746)
Q Consensus 544 ~lv~e~~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~---~~~~ki~DfGla 613 (746)
++||||+++|+|. ...+++.++..++.||+.||+|||+. +|+||||||+|||++. ++.+||+|||+|
T Consensus 135 ~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a 211 (400)
T 1nxk_A 135 LIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFA 211 (400)
T ss_dssp EEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCCTTC
T ss_pred EEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEecccc
Confidence 9999999999985 23589999999999999999999999 9999999999999987 789999999999
Q ss_pred ccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 614 KFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
+..... ......+||+.|+|||++.+..++. ++|||||||++|
T Consensus 212 ~~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~---~~DiwslG~il~ 254 (400)
T 1nxk_A 212 KETTSH---------NSLTTPCYTPYYVAPEVLGPEKYDK---SCDMWSLGVIMY 254 (400)
T ss_dssp EECC--------------------CTTCCGGGSCCCCSSS---HHHHHHHHHHHH
T ss_pred cccCCC---------CccccCCCCCCccCHhhcCCCCCCC---cccHHHHHHHHH
Confidence 865321 1223478999999999998877654 599999999998
No 182
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=99.97 E-value=8.7e-33 Score=297.59 Aligned_cols=173 Identities=20% Similarity=0.293 Sum_probs=134.2
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhh--hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecC------
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLK--QKEASRSFAAEFNALRNIRHRNLIKIITICSSI------ 540 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~------ 540 (746)
..++|+..+.||+|+||.||+ ||||++... .....+++.+|+++++.++||||+++++++...
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~ 106 (367)
T 2fst_X 27 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEF 106 (367)
T ss_dssp EETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGC
T ss_pred CCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccC
Confidence 457899999999999999997 899998643 233456788999999999999999999998764
Q ss_pred CcccchhhhccCCccc----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccc
Q 041467 541 DFEGFDFKAISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFL 616 (746)
Q Consensus 541 ~~~~lv~e~~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~ 616 (746)
...++|+|++ +++|. ...+++.++..++.||++||+|||+. +|+||||||+||+++.++.+||+|||+|+..
T Consensus 107 ~~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~a~~~ 182 (367)
T 2fst_X 107 NDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHT 182 (367)
T ss_dssp CCCEEEEECC-CEECC-----CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC-------
T ss_pred CeEEEEeccc-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeeccccccc
Confidence 4578999998 56665 45689999999999999999999999 9999999999999999999999999999864
Q ss_pred cCCCCCCCcccccccccccccccccccccccc-cccccCCCccceeeccceee
Q 041467 617 YGYEPGTTAETASSSIGINGTVGYVAPVIIAA-RNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~~~~~DiwSlG~i~~ 668 (746)
.. .....+||++|+|||++.+ ..++ .++||||+||++|
T Consensus 183 ~~-----------~~~~~~~t~~y~aPE~~~~~~~~~---~~~DiwslG~il~ 221 (367)
T 2fst_X 183 AD-----------EMTGYVATRWYRAPEIMLNWMHYN---QTVDIWSVGCIMA 221 (367)
T ss_dssp -------------------CCCTTCCHHHHTTCCSCC---TTHHHHHHHHHHH
T ss_pred cc-----------cCCCcCcCcCccChHHHcCCcCCC---chhhHHHHHHHHH
Confidence 22 1234689999999999987 4444 4599999999998
No 183
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=99.97 E-value=8.9e-33 Score=293.07 Aligned_cols=177 Identities=19% Similarity=0.273 Sum_probs=145.9
Q ss_pred hcCCCCCCeEeecCCeeEEE-------------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCccc
Q 041467 479 TNNFSPANKIREGGFNIVYN-------------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEG 544 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~-------------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~ 544 (746)
.++|+..+.||+|+||.||+ ||+|++.... ....+.+.+|+.++++++|||||++++++. .+..+
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~ 90 (325)
T 3kex_A 12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQ 90 (325)
T ss_dssp TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEE
T ss_pred HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccE
Confidence 35788899999999999996 5666654322 233456789999999999999999999986 46688
Q ss_pred chhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccC
Q 041467 545 FDFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618 (746)
Q Consensus 545 lv~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~ 618 (746)
+||||+.+|++. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+|+....
T Consensus 91 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 167 (325)
T 3kex_A 91 LVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPP 167 (325)
T ss_dssp EEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGGGSCC
T ss_pred EEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCcccccCc
Confidence 999999999985 34789999999999999999999999 999999999999999999999999999988643
Q ss_pred CCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 619 YEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 619 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.... .......||..|+|||++.+..++.+ +||||+||++|
T Consensus 168 ~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~~l~ 208 (325)
T 3kex_A 168 DDKQ------LLYSEAKTPIKWMALESIHFGKYTHQ---SDVWSYGVTVW 208 (325)
T ss_dssp CTTC------CC-----CCTTTSCHHHHHHCCCCHH---HHHHHHHHHHH
T ss_pred cccc------ccccCCCCcccccChHHhccCCCChh---hHhHHhHHHHH
Confidence 3221 12234668889999999988877654 99999999998
No 184
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=99.97 E-value=1e-32 Score=289.32 Aligned_cols=178 Identities=22% Similarity=0.330 Sum_probs=149.7
Q ss_pred cCCCCCCeEeecCCeeEEE-------------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecC--Ccc
Q 041467 480 NNFSPANKIREGGFNIVYN-------------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSI--DFE 543 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~-------------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~--~~~ 543 (746)
..|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++||||+++++++... ...
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 4588899999999999985 8999986443 33456799999999999999999999999886 567
Q ss_pred cchhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccccccccc
Q 041467 544 GFDFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617 (746)
Q Consensus 544 ~lv~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~ 617 (746)
++||||+++|+|. ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 101 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 177 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIE 177 (302)
T ss_dssp EEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECccccccccc
Confidence 8999999999986 34689999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 618 GYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.... .........||..|+|||++.+..++.+ +||||+||++|
T Consensus 178 ~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~il~ 220 (302)
T 4e5w_A 178 TDKE-----YYTVKDDRDSPVFWYAPECLMQSKFYIA---SDVWSFGVTLH 220 (302)
T ss_dssp TTCC-----EEECCCCTTCCGGGCCHHHHHHCEEEHH---HHHHHHHHHHH
T ss_pred CCCc-----ceeccCCCCCCccccCCeeecCCCCCcc---hhHHHHHHHHH
Confidence 3321 1122334668899999999988877655 99999999998
No 185
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=99.97 E-value=6.7e-33 Score=294.31 Aligned_cols=179 Identities=20% Similarity=0.263 Sum_probs=153.2
Q ss_pred hcCCCCCCeEeecCCeeEEE-------------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEec--CCcc
Q 041467 479 TNNFSPANKIREGGFNIVYN-------------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSS--IDFE 543 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~-------------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~--~~~~ 543 (746)
.++|+..+.||+|+||.||+ ||||++........+.+.+|++++++++||||+++++++.. ....
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 101 (327)
T 3lxl_A 22 ERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSL 101 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEE
T ss_pred hhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceE
Confidence 35788999999999999985 89999876655666789999999999999999999999874 4468
Q ss_pred cchhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccccccccc
Q 041467 544 GFDFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617 (746)
Q Consensus 544 ~lv~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~ 617 (746)
++||||+++|+|. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~ 178 (327)
T 3lxl_A 102 RLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLLP 178 (327)
T ss_dssp EEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGGCEECC
T ss_pred EEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEcccccceecc
Confidence 8999999999986 34689999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 618 GYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.... .........||..|+|||++.+..++.+ +||||+||++|
T Consensus 179 ~~~~-----~~~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~il~ 221 (327)
T 3lxl_A 179 LDKD-----YYVVREPGQSPIFWYAPESLSDNIFSRQ---SDVWSFGVVLY 221 (327)
T ss_dssp TTCS-----EEECSSCCCSCGGGSCHHHHHHCEEEHH---HHHHHHHHHHH
T ss_pred cCCc-----cceeeccCCccccccCHHHhccCCCChH---HhHHHHHHHHH
Confidence 3221 1112233568899999999988877655 99999999998
No 186
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=99.97 E-value=4.3e-33 Score=293.81 Aligned_cols=231 Identities=19% Similarity=0.203 Sum_probs=174.3
Q ss_pred hhhcCCCCCCeEeecCCeeEEE--------------EEeehhhhhh-hhhhHHHHHHHHHhhcC-CCCceeeEEEEEecC
Q 041467 477 KATNNFSPANKIREGGFNIVYN--------------VAMKVANLKQ-KEASRSFAAEFNALRNI-RHRNLIKIITICSSI 540 (746)
Q Consensus 477 ~~~~~~~~~~~ig~g~~g~v~~--------------vavK~~~~~~-~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~~ 540 (746)
...++|+..+.||+|+||.||+ ||||++.... ....+.+.+|+++++++ +||||+++++++...
T Consensus 20 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 99 (313)
T 1t46_A 20 FPRNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIG 99 (313)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred cChhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecC
Confidence 3456899999999999999995 7899886443 23456799999999999 899999999999999
Q ss_pred CcccchhhhccCCccc-----cc------------------CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCe
Q 041467 541 DFEGFDFKAISNGQLR-----LC------------------NLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNI 597 (746)
Q Consensus 541 ~~~~lv~e~~~~g~l~-----~~------------------~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NI 597 (746)
+..++||||+++|+|. .. .+++.++..++.|++.||+|||+. +|+||||||+||
T Consensus 100 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Ni 176 (313)
T 1t46_A 100 GPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNI 176 (313)
T ss_dssp SSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGE
T ss_pred CCcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceE
Confidence 9999999999999885 11 389999999999999999999999 999999999999
Q ss_pred eeCCCCcEEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-cc--
Q 041467 598 LLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ-- 674 (746)
Q Consensus 598 Ll~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~-- 674 (746)
+++.++.+||+|||+++........ .......||+.|+|||++.+..++.+ +||||+||++|.... ..
T Consensus 177 l~~~~~~~kl~Dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~il~ellt~g~~p 247 (313)
T 1t46_A 177 LLTHGRITKICDFGLARDIKNDSNY------VVKGNARLPVKWMAPESIFNCVYTFE---SDVWSYGIFLWELFSLGSSP 247 (313)
T ss_dssp EEETTTEEEECCCGGGSCTTSCTTS------EECSSSEECGGGCCHHHHHHCCCCHH---HHHHHHHHHHHHHHTTTCCS
T ss_pred EEcCCCCEEEccccccccccccccc------eeccCCCCcceeeChHHhcCCCCChH---HHHHHHHHHHHHHHhCCCCC
Confidence 9999999999999999876433211 11223567889999999988776554 999999999983221 11
Q ss_pred ---------ccchhhc--cccCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhccc
Q 041467 675 ---------NKSILKS--AGIKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLR 719 (746)
Q Consensus 675 ---------~~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~ 719 (746)
....... .........+.+..++..|+...|. ||+..++...+++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~ 304 (313)
T 1t46_A 248 YPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEK 304 (313)
T ss_dssp STTCCSSHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred CCcccchhHHHHHhccCCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHH
Confidence 0011111 1111123334455555555555565 7787776655544
No 187
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=99.97 E-value=4.3e-33 Score=303.25 Aligned_cols=172 Identities=22% Similarity=0.295 Sum_probs=142.6
Q ss_pred hcCCCCCCeEeecCCeeEEE--------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCC------ccc
Q 041467 479 TNNFSPANKIREGGFNIVYN--------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSID------FEG 544 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~--------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~------~~~ 544 (746)
..+|+..+.||+|+||.||+ ||+|++.... +...+|+++++.++|||||+++++|...+ ..+
T Consensus 39 ~~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~----~~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~ 114 (394)
T 4e7w_A 39 EIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDK----RFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLN 114 (394)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEE
T ss_pred cceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCc----chHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEE
Confidence 35689999999999999996 7888774322 12347999999999999999999996644 378
Q ss_pred chhhhccCCccc--------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeC-CCCcEEEcccccccc
Q 041467 545 FDFKAISNGQLR--------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLD-QDVVTHVGDLGLAKF 615 (746)
Q Consensus 545 lv~e~~~~g~l~--------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~-~~~~~ki~DfGla~~ 615 (746)
+||||++++.+. ...+++..+..++.||++||+|||+. +|+||||||+|||++ .++.+||+|||+|+.
T Consensus 115 lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~ 191 (394)
T 4e7w_A 115 LVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAKI 191 (394)
T ss_dssp EEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred EEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCccc
Confidence 999999876543 45789999999999999999999999 999999999999998 799999999999987
Q ss_pred ccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 616 LYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
..... .....+||+.|+|||++.+... ++.++||||+||++|
T Consensus 192 ~~~~~---------~~~~~~~t~~y~aPE~~~~~~~--~~~~~DiwSlG~il~ 233 (394)
T 4e7w_A 192 LIAGE---------PNVSYICSRYYRAPELIFGATN--YTTNIDIWSTGCVMA 233 (394)
T ss_dssp CCTTC---------CCCSSCSCGGGCCHHHHTTCSS--CCTHHHHHHHHHHHH
T ss_pred ccCCC---------CCcccccCcCccCHHHHcCCCC--CCcHHHHHHHHHHHH
Confidence 63322 1234678999999999976532 244699999999999
No 188
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=99.97 E-value=1.4e-32 Score=285.90 Aligned_cols=174 Identities=19% Similarity=0.305 Sum_probs=147.5
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhh--hhhhhHHHHHHHHHhhcC-CCCceeeEEEEEecCCcccc
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLK--QKEASRSFAAEFNALRNI-RHRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~--~~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~~~~~~l 545 (746)
..++|+..+.||+|+||.||+ ||||++... .......+.+|+..+..+ +||||+++++++.+.+..++
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~l 88 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLI 88 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEE
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence 456799999999999999997 899988643 233456788999999999 89999999999999999999
Q ss_pred hhhhccCCccc---------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCC--------------
Q 041467 546 DFKAISNGQLR---------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQD-------------- 602 (746)
Q Consensus 546 v~e~~~~g~l~---------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~-------------- 602 (746)
||||+++|+|. ...+++.++..++.||+.||+|||++ +|+||||||+||+++.+
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~ 165 (289)
T 1x8b_A 89 QNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDD 165 (289)
T ss_dssp EEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC----------------
T ss_pred EEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCccccccccccc
Confidence 99999999986 15689999999999999999999999 99999999999999844
Q ss_pred -----CcEEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 603 -----VVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 603 -----~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
..+||+|||.+...... ....||+.|+|||++.+... .+.++||||+||++|
T Consensus 166 ~~~~~~~~kl~Dfg~~~~~~~~------------~~~~gt~~y~aPE~~~~~~~--~~~~~Di~slG~il~ 222 (289)
T 1x8b_A 166 WASNKVMFKIGDLGHVTRISSP------------QVEEGDSRFLANEVLQENYT--HLPKADIFALALTVV 222 (289)
T ss_dssp ----CCCEEECCCTTCEETTCS------------CCCCCCGGGCCHHHHTTCCT--THHHHHHHHHHHHHH
T ss_pred ccCCceEEEEcccccccccCCc------------cccCCCccccChhHhcCCCC--CCchhhHHHHHHHHH
Confidence 47999999999875321 12458999999999986532 123599999999998
No 189
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=1e-32 Score=288.70 Aligned_cols=229 Identities=18% Similarity=0.196 Sum_probs=169.7
Q ss_pred CCCCCCeEeecCCeeEEE------------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcc-cch
Q 041467 481 NFSPANKIREGGFNIVYN------------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFE-GFD 546 (746)
Q Consensus 481 ~~~~~~~ig~g~~g~v~~------------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~-~lv 546 (746)
.|...+.||+|+||.||+ ||+|++.... ....+.+.+|++++++++||||+++++++.+.+.. +++
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 455678999999999995 7899876432 34457799999999999999999999999876654 899
Q ss_pred hhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCC
Q 041467 547 FKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620 (746)
Q Consensus 547 ~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~ 620 (746)
|||+.+|++. ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 102 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 178 (298)
T 3pls_A 102 LPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDRE 178 (298)
T ss_dssp ECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGG
T ss_pred EecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCcccccCCc
Confidence 9999999986 35688999999999999999999999 99999999999999999999999999998653321
Q ss_pred CCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-cc-------ccc----hhhc-cccCCC
Q 041467 621 PGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ-------NKS----ILKS-AGIKGK 687 (746)
Q Consensus 621 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~-------~~~----i~~~-~~~~~~ 687 (746)
. ..........||+.|+|||++.+..++.+ +||||+||++|.... .. ... +... ......
T Consensus 179 ~----~~~~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (298)
T 3pls_A 179 Y----YSVQQHRHARLPVKWTALESLQTYRFTTK---SDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPE 251 (298)
T ss_dssp G----GCSCCSSCTTCGGGGSCHHHHTTCCCCHH---HHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTTCCCCCCT
T ss_pred c----cccccCcCCCCCccccChhhhccCCCChh---hchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcCCCCCCCc
Confidence 1 01122234678999999999988877655 999999999982211 10 001 1111 111122
Q ss_pred ccHHHHHHhhCCCCCCCCC-CCCccchhhhccc
Q 041467 688 KTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLR 719 (746)
Q Consensus 688 ~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~ 719 (746)
...+.+..++..|+...|. ||+..++...++.
T Consensus 252 ~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~ 284 (298)
T 3pls_A 252 YCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQ 284 (298)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred cchHHHHHHHHHHccCChhhCcCHHHHHHHHHH
Confidence 2334455555555555565 7787766655544
No 190
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=99.97 E-value=2.5e-32 Score=305.99 Aligned_cols=175 Identities=25% Similarity=0.334 Sum_probs=150.1
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccch
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
..++|+..+.||+|+||.||+ ||||++.... ......+.+|++++++++|||||++++++.+....++|
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 99 (486)
T 3mwu_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (486)
T ss_dssp HHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEE
Confidence 456799999999999999997 8999986543 23456789999999999999999999999999999999
Q ss_pred hhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeC---CCCcEEEccccccccccC
Q 041467 547 FKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLD---QDVVTHVGDLGLAKFLYG 618 (746)
Q Consensus 547 ~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~---~~~~~ki~DfGla~~~~~ 618 (746)
|||+.+|++. ...+++.++..++.|++.||+|||+. +|+||||||+||+++ .++.+||+|||+|+....
T Consensus 100 ~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 176 (486)
T 3mwu_A 100 GELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176 (486)
T ss_dssp ECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCC
T ss_pred EEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCeECCC
Confidence 9999999985 46789999999999999999999999 999999999999995 467899999999986532
Q ss_pred CCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 619 YEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 619 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
. ......+||+.|+|||++.+. ++ .++||||+||++|
T Consensus 177 ~---------~~~~~~~gt~~y~aPE~~~~~-~~---~~~DiwslG~il~ 213 (486)
T 3mwu_A 177 N---------TKMKDRIGTAYYIAPEVLRGT-YD---EKCDVWSAGVILY 213 (486)
T ss_dssp C-------------CCTTGGGGCCGGGGGSC-CC---HHHHHHHHHHHHH
T ss_pred C---------CccCCCcCCCCCCCHHHhCCC-CC---chhhHHHHHHHHH
Confidence 2 122346799999999998764 44 4599999999998
No 191
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=99.97 E-value=2.4e-33 Score=294.15 Aligned_cols=180 Identities=18% Similarity=0.243 Sum_probs=147.0
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhh
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFK 548 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e 548 (746)
..++|+..+.||+|+||.||+ ||+|++........+.+.+|++++++++||||+++++++...+..++|||
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 96 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE 96 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence 456789999999999999997 89999876655667789999999999999999999999999999999999
Q ss_pred hccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCC
Q 041467 549 AISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPG 622 (746)
Q Consensus 549 ~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~ 622 (746)
|+++|++. ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 97 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~--- 170 (302)
T 2j7t_A 97 FCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT--- 170 (302)
T ss_dssp CCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHH---
T ss_pred eCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCcccccc---
Confidence 99999885 35689999999999999999999999 9999999999999999999999999998643211
Q ss_pred CCccccccccccccccccccccccccc--ccccCCCccceeeccceee
Q 041467 623 TTAETASSSIGINGTVGYVAPVIIAAR--NLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 623 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~--~~~~~~~~~DiwSlG~i~~ 668 (746)
........||+.|+|||++... ....++.++|||||||++|
T Consensus 171 -----~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~ 213 (302)
T 2j7t_A 171 -----LQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLI 213 (302)
T ss_dssp -----HHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHH
T ss_pred -----ccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHH
Confidence 1112236789999999998521 1112345699999999998
No 192
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=99.97 E-value=1.5e-32 Score=302.25 Aligned_cols=172 Identities=24% Similarity=0.274 Sum_probs=146.0
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcC------CCCceeeEEEEEecCCc
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNI------RHRNLIKIITICSSIDF 542 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l------~HpnIv~l~~~~~~~~~ 542 (746)
...+|+..+.||+|+||.||+ ||||++... ....+.+.+|+++++.+ +||||+++++++...+.
T Consensus 95 ~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~ 173 (429)
T 3kvw_A 95 VAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNH 173 (429)
T ss_dssp ETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTE
T ss_pred ccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCe
Confidence 345799999999999999997 899998643 23345677888888777 57799999999999999
Q ss_pred ccchhhhccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCc--EEEcccccc
Q 041467 543 EGFDFKAISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVV--THVGDLGLA 613 (746)
Q Consensus 543 ~~lv~e~~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~--~ki~DfGla 613 (746)
.++||||+.+ ++. ...+++..+..++.||+.||+|||+. +|+||||||+|||++.++. +||+|||+|
T Consensus 174 ~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~DFG~a 249 (429)
T 3kvw_A 174 ICMTFELLSM-NLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFGSS 249 (429)
T ss_dssp EEEEECCCCC-BHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECCCTTC
T ss_pred EEEEEeccCC-CHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEeecccc
Confidence 9999999974 553 23489999999999999999999999 9999999999999999887 999999999
Q ss_pred ccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 614 KFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
+.... .....+||+.|+|||++.+..++. ++|||||||++|
T Consensus 250 ~~~~~-----------~~~~~~gt~~y~aPE~~~~~~~~~---~~DiwSlG~il~ 290 (429)
T 3kvw_A 250 CYEHQ-----------RVYTYIQSRFYRAPEVILGARYGM---PIDMWSLGCILA 290 (429)
T ss_dssp EETTC-----------CCCSSCSCGGGCCHHHHHTBCCCT---HHHHHHHHHHHH
T ss_pred eecCC-----------cccccCCCCCccChHHHhCCCCCc---hHHHHhHHHHHH
Confidence 76421 123467999999999999887755 499999999998
No 193
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=99.97 E-value=8.4e-33 Score=294.73 Aligned_cols=173 Identities=21% Similarity=0.311 Sum_probs=147.4
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcC-CCCceeeEEEEEecCCcccchh
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNI-RHRNLIKIITICSSIDFEGFDF 547 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~~~~~~lv~ 547 (746)
..++|+..+.||+|+||.||+ ||||++..... ...+|++++.++ +|||||++++++.+.+..++||
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ 95 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVT 95 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEE
Confidence 456799999999999999997 89999864432 346788888888 7999999999999999999999
Q ss_pred hhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCC-C---CcEEEccccccccccC
Q 041467 548 KAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQ-D---VVTHVGDLGLAKFLYG 618 (746)
Q Consensus 548 e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~-~---~~~ki~DfGla~~~~~ 618 (746)
||+++|++. ...+++.++..++.||+.|++|||+. +|+||||||+||++.+ + +.+||+|||+++....
T Consensus 96 E~~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~ 172 (342)
T 2qr7_A 96 ELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRA 172 (342)
T ss_dssp CCCCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBC
T ss_pred eCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcC
Confidence 999999885 45689999999999999999999999 9999999999999843 2 3599999999987643
Q ss_pred CCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 619 YEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 619 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.. ......+||+.|+|||++.+..++.+ +||||+||++|
T Consensus 173 ~~--------~~~~~~~gt~~y~aPE~~~~~~~~~~---~DiwslG~il~ 211 (342)
T 2qr7_A 173 EN--------GLLMTPCYTANFVAPEVLERQGYDAA---CDIWSLGVLLY 211 (342)
T ss_dssp TT--------CCBCCSSCCSSCCCHHHHHHHHHHHH---HHHHHHHHHHH
T ss_pred CC--------CceeccCCCccccCHHHhcCCCCCCc---cCeeeHhHHHH
Confidence 21 12234679999999999988777655 99999999998
No 194
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=99.97 E-value=5.8e-33 Score=294.57 Aligned_cols=229 Identities=18% Similarity=0.214 Sum_probs=164.5
Q ss_pred hcCCCCCCeEeecCCeeEEE-------------EEeehhhhh-hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCccc
Q 041467 479 TNNFSPANKIREGGFNIVYN-------------VAMKVANLK-QKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEG 544 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~-------------vavK~~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~ 544 (746)
.++|+..+.||+|+||.||+ ||+|.+... .....+.+.+|++++++++|||||+++++|.... .+
T Consensus 14 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~ 92 (327)
T 3lzb_A 14 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQ 92 (327)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EE
T ss_pred HhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ce
Confidence 46789999999999999997 466665432 2334577999999999999999999999998754 77
Q ss_pred chhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccC
Q 041467 545 FDFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618 (746)
Q Consensus 545 lv~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~ 618 (746)
+++|++.+|++. ...+++..+..++.|++.||+|||++ +|+||||||+||+++.++.+||+|||+|+....
T Consensus 93 ~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~ 169 (327)
T 3lzb_A 93 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 169 (327)
T ss_dssp EEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC------
T ss_pred EEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCcceeEccC
Confidence 899999999885 35689999999999999999999999 999999999999999999999999999987643
Q ss_pred CCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-cc----------ccchhhc--cccC
Q 041467 619 YEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ----------NKSILKS--AGIK 685 (746)
Q Consensus 619 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~----------~~~i~~~--~~~~ 685 (746)
.... .......||+.|+|||++.+..++.+ +||||+||++|.... .. ....... ....
T Consensus 170 ~~~~------~~~~~~~~t~~y~aPE~~~~~~~~~~---~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~ 240 (327)
T 3lzb_A 170 EEKE------YHAEGGKVPIKWMALESILHRIYTHQ---SDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 240 (327)
T ss_dssp ----------------CCCGGGSCHHHHHHCCCCHH---HHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCC
T ss_pred cccc------ccccCCCccccccCHHHHcCCCCChH---HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCC
Confidence 2211 12223557889999999998877655 999999999983221 11 0011111 1111
Q ss_pred CCccHHHHHHhhCCCCCCCCC-CCCccchhhhcccC
Q 041467 686 GKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLRL 720 (746)
Q Consensus 686 ~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~ 720 (746)
.......+..++..|+...|. ||+..++...+.++
T Consensus 241 ~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~ 276 (327)
T 3lzb_A 241 PPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKM 276 (327)
T ss_dssp CTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 223344455555555556666 88888766555543
No 195
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=99.97 E-value=1.1e-32 Score=292.88 Aligned_cols=179 Identities=22% Similarity=0.312 Sum_probs=141.1
Q ss_pred hhhhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCccc
Q 041467 476 SKATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEG 544 (746)
Q Consensus 476 ~~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~ 544 (746)
....++|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++|||||++++++.+.+..+
T Consensus 30 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 109 (329)
T 3gbz_A 30 ATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLH 109 (329)
T ss_dssp --CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEE
T ss_pred ccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEE
Confidence 34567899999999999999997 8999986442 223456789999999999999999999999999999
Q ss_pred chhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeee-----CCCCcEEEccccccc
Q 041467 545 FDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL-----DQDVVTHVGDLGLAK 614 (746)
Q Consensus 545 lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl-----~~~~~~ki~DfGla~ 614 (746)
+||||+.+ ++. ...+++.++..++.|++.||+|||+. +|+||||||+||++ ++++.+||+|||+|+
T Consensus 110 lv~e~~~~-~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~ 185 (329)
T 3gbz_A 110 LIFEYAEN-DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR 185 (329)
T ss_dssp EEEECCSE-EHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTTHHH
T ss_pred EEEecCCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCCCcc
Confidence 99999974 554 45689999999999999999999999 99999999999999 455669999999998
Q ss_pred cccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 615 FLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
...... .......||+.|+|||++.+... ++.++||||+||++|
T Consensus 186 ~~~~~~--------~~~~~~~~t~~y~aPE~~~~~~~--~~~~~DiwslG~il~ 229 (329)
T 3gbz_A 186 AFGIPI--------RQFTHEIITLWYRPPEILLGSRH--YSTSVDIWSIACIWA 229 (329)
T ss_dssp HHC-------------------CCTTCCHHHHTTCCC--CCTHHHHHHHHHHHH
T ss_pred ccCCcc--------cccCCCcCCccccCHHHhcCCCC--CCcHHHHHHHHHHHH
Confidence 763221 12234678999999999987542 234699999999998
No 196
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=99.97 E-value=7.4e-33 Score=313.11 Aligned_cols=235 Identities=20% Similarity=0.270 Sum_probs=180.0
Q ss_pred HHhhhhcCCCCCCeEeecCCeeEEE--------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccc
Q 041467 474 ELSKATNNFSPANKIREGGFNIVYN--------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 474 ~~~~~~~~~~~~~~ig~g~~g~v~~--------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~l 545 (746)
++....++|+..+.||+|+||.||+ ||||++.... ...+.|.+|+++|++++|||||++++++.+ +..++
T Consensus 261 ~~~i~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~l 338 (535)
T 2h8h_A 261 AWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYI 338 (535)
T ss_dssp CSBCCGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEE
T ss_pred ceecchhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceE
Confidence 3444566788899999999999997 9999986543 234679999999999999999999999876 67899
Q ss_pred hhhhccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccC
Q 041467 546 DFKAISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618 (746)
Q Consensus 546 v~e~~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~ 618 (746)
||||+.+|+|. ...+++.++..++.||+.||+|||++ +|+||||||+|||+++++.+||+|||+++.+..
T Consensus 339 v~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 415 (535)
T 2h8h_A 339 VTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIED 415 (535)
T ss_dssp EECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTCCC
T ss_pred eeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceecCC
Confidence 99999999986 24589999999999999999999999 999999999999999999999999999987532
Q ss_pred CCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-cc-------ccchhh----c-cccC
Q 041467 619 YEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ-------NKSILK----S-AGIK 685 (746)
Q Consensus 619 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~-------~~~i~~----~-~~~~ 685 (746)
.. ........++..|+|||++.+..++.+ +|||||||++|.... .. ..++.. . ....
T Consensus 416 ~~-------~~~~~~~~~~~~y~aPE~~~~~~~~~~---sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~ 485 (535)
T 2h8h_A 416 NE-------YTARQGAKFPIKWTAPEAALYGRFTIK---SDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPC 485 (535)
T ss_dssp HH-------HHTTCSTTSCGGGSCHHHHHHCCCCHH---HHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHTTCCCCC
T ss_pred Cc-------eecccCCcCcccccCHHHhccCCCCch---hhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCC
Confidence 11 111223457889999999988777554 999999999983222 10 001111 0 1111
Q ss_pred CCccHHHHHHhhCCCCCCCCC-CCCccchhhhcccCCCC
Q 041467 686 GKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLRLPSR 723 (746)
Q Consensus 686 ~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~~~~ 723 (746)
...+.+.+..++..|+...|+ ||++.++...++.+...
T Consensus 486 ~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~ 524 (535)
T 2h8h_A 486 PPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 524 (535)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCC
T ss_pred CCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhc
Confidence 234445566667777777777 89999888777765543
No 197
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=99.97 E-value=6.3e-33 Score=304.46 Aligned_cols=171 Identities=24% Similarity=0.328 Sum_probs=140.3
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCC------cc
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSID------FE 543 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~------~~ 543 (746)
..+|+..+.||+|+||.||+ ||||++.... +...+|++++++++|||||+++++|...+ +.
T Consensus 53 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~ 128 (420)
T 1j1b_A 53 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYL 128 (420)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEE
T ss_pred cceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeE
Confidence 34688899999999999997 8999885322 22457999999999999999999986522 36
Q ss_pred cchhhhccCCccc--------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCC-CcEEEccccccc
Q 041467 544 GFDFKAISNGQLR--------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQD-VVTHVGDLGLAK 614 (746)
Q Consensus 544 ~lv~e~~~~g~l~--------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~-~~~ki~DfGla~ 614 (746)
++||||++++... ...+++..+..++.||++||+|||+. +|+||||||+|||++.+ +.+||+|||+|+
T Consensus 129 ~lv~e~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~a~ 205 (420)
T 1j1b_A 129 NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAK 205 (420)
T ss_dssp EEEEECCCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred EeehhcccccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchhhh
Confidence 7899999865332 35689999999999999999999999 99999999999999954 678999999998
Q ss_pred cccCCCCCCCccccccccccccccccccccccccc-ccccCCCccceeeccceee
Q 041467 615 FLYGYEPGTTAETASSSIGINGTVGYVAPVIIAAR-NLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~~~~~DiwSlG~i~~ 668 (746)
.+.... .....+||++|+|||++.+. .+ +.++||||+||++|
T Consensus 206 ~~~~~~---------~~~~~~~t~~y~aPE~~~~~~~~---~~~~DiwSlG~il~ 248 (420)
T 1j1b_A 206 QLVRGE---------PNVSYICSRYYRAPELIFGATDY---TSSIDVWSAGCVLA 248 (420)
T ss_dssp ECCTTC---------CCCSCCSCTTSCCHHHHTTCSSC---CTHHHHHHHHHHHH
T ss_pred hcccCC---------CceeeeeCCCcCCHHHHcCCCCC---CchhhhHHHHHHHH
Confidence 763221 12346799999999999765 44 44699999999998
No 198
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=99.97 E-value=2e-32 Score=283.26 Aligned_cols=176 Identities=23% Similarity=0.329 Sum_probs=145.0
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccch
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
.++|+..+.||+|+||.||+ ||||++.... ....+.+.+|+++++.++||||+++++++...+..++|
T Consensus 10 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (276)
T 2h6d_A 10 IGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMV 89 (276)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred eccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEE
Confidence 46789999999999999996 8999986543 23456789999999999999999999999999999999
Q ss_pred hhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCC
Q 041467 547 FKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 547 ~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~ 621 (746)
|||++++++. ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~- 165 (276)
T 2h6d_A 90 MEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE- 165 (276)
T ss_dssp EECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC---
T ss_pred EeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccCCCc-
Confidence 9999999985 45689999999999999999999999 99999999999999999999999999998753221
Q ss_pred CCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......||+.|+|||++.+..+. +.++||||+||++|
T Consensus 166 --------~~~~~~~~~~y~aPE~~~~~~~~--~~~~Di~slG~~l~ 202 (276)
T 2h6d_A 166 --------FLRTSCGSPNYAAPEVISGRLYA--GPEVDIWSCGVILY 202 (276)
T ss_dssp -------------------CCTGGGTTSCCC--HHHHHHHHHHHHHH
T ss_pred --------ceecccCCccccCHHHHcCCCCC--CccchHHHHHHHHH
Confidence 12235789999999999877552 23599999999998
No 199
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=99.97 E-value=9.3e-33 Score=292.75 Aligned_cols=175 Identities=20% Similarity=0.293 Sum_probs=140.4
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhhhhh-hhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhh
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQKE-ASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKA 549 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~-~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~ 549 (746)
++|+..+.||+|+||.||+ ||||++...... ....+.+|++++++++|||||++++++...+..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 5788999999999999997 899988644322 222456899999999999999999999999999999999
Q ss_pred ccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCC
Q 041467 550 ISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623 (746)
Q Consensus 550 ~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~ 623 (746)
+.+ ++. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~--- 154 (324)
T 3mtl_A 82 LDK-DLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPT--- 154 (324)
T ss_dssp CSE-EHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC-------
T ss_pred ccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccCCc---
Confidence 974 543 34589999999999999999999999 99999999999999999999999999998653211
Q ss_pred CcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 624 TAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 624 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.......||+.|+|||++.+... ++.++||||+||++|
T Consensus 155 -----~~~~~~~~t~~y~aPE~~~~~~~--~~~~~DiwslG~il~ 192 (324)
T 3mtl_A 155 -----KTYDNEVVTLWYRPPDILLGSTD--YSTQIDMWGVGCIFY 192 (324)
T ss_dssp -------------CGGGCCHHHHTTCCC--CCTHHHHHHHHHHHH
T ss_pred -----cccccccCcccccChhhhcCCCC--CCcHHHHHHHHHHHH
Confidence 12233578999999999976432 244699999999998
No 200
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=99.97 E-value=1.5e-32 Score=290.09 Aligned_cols=183 Identities=21% Similarity=0.284 Sum_probs=145.1
Q ss_pred hcCCCCC-CeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcC-CCCceeeEEEEEecCCcccchh
Q 041467 479 TNNFSPA-NKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNI-RHRNLIKIITICSSIDFEGFDF 547 (746)
Q Consensus 479 ~~~~~~~-~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~~~~~~lv~ 547 (746)
.+.|+.. +.||+|+||.||+ ||||++........+.+.+|+++++++ +||||+++++++.+.+..++||
T Consensus 11 ~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~ 90 (316)
T 2ac3_A 11 EDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVF 90 (316)
T ss_dssp TTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred ceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEE
Confidence 3567764 7899999999997 899998755445567899999999985 7999999999999999999999
Q ss_pred hhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCc---EEEccccccccccCC
Q 041467 548 KAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVV---THVGDLGLAKFLYGY 619 (746)
Q Consensus 548 e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~---~ki~DfGla~~~~~~ 619 (746)
||+++|++. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||+++.....
T Consensus 91 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~ 167 (316)
T 2ac3_A 91 EKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLN 167 (316)
T ss_dssp ECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC-----
T ss_pred EcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCccccccC
Confidence 999999986 45789999999999999999999999 9999999999999987765 999999999865422
Q ss_pred CCCCCcccccccccccccccccccccccc-----cccccCCCccceeeccceee
Q 041467 620 EPGTTAETASSSIGINGTVGYVAPVIIAA-----RNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 620 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-----~~~~~~~~~~DiwSlG~i~~ 668 (746)
..... .........+||+.|+|||++.+ ..+ +.++||||+||++|
T Consensus 168 ~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~---~~~~DiwslG~il~ 217 (316)
T 2ac3_A 168 GDCSP-ISTPELLTPCGSAEYMAPEVVEAFSEEASIY---DKRCDLWSLGVILY 217 (316)
T ss_dssp ---------------CCSGGGCCHHHHHHTSHHHHHH---TTTHHHHHHHHHHH
T ss_pred Ccccc-ccccccccccCCcCccChHHhhcccccccCC---CcccccHhHHHHHH
Confidence 21100 01112234679999999999975 334 44599999999998
No 201
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=99.97 E-value=1.5e-32 Score=298.22 Aligned_cols=173 Identities=20% Similarity=0.296 Sum_probs=141.3
Q ss_pred hhhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecC-------
Q 041467 477 KATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSI------- 540 (746)
Q Consensus 477 ~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~------- 540 (746)
...++|+..+.||+|+||.||+ ||||++.... +...+|+++++.++|||||+++++|...
T Consensus 4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~----~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~ 79 (383)
T 3eb0_A 4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDP----RYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKP 79 (383)
T ss_dssp --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHTTCCCTTBCCEEEEEEEC-------
T ss_pred cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHHcCCCCccchhheeeecCcccccc
Confidence 4567899999999999999997 8999885332 2245799999999999999999998543
Q ss_pred -------------------------------CcccchhhhccCCccc---------ccCCCHHHHHHHHHHHHHHHHHHH
Q 041467 541 -------------------------------DFEGFDFKAISNGQLR---------LCNLSLTQRVNIAIDVAFAIEYLR 580 (746)
Q Consensus 541 -------------------------------~~~~lv~e~~~~g~l~---------~~~l~~~~~~~i~~~i~~~l~yLH 580 (746)
...++||||+++ ++. ...+++..+..++.|+++||+|||
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH 158 (383)
T 3eb0_A 80 PQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIH 158 (383)
T ss_dssp ------------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 237899999985 432 357899999999999999999999
Q ss_pred hcCCCCeEEcCCCCCCeeeC-CCCcEEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccc
Q 041467 581 HHCQPSIVHGDLKPSNILLD-QDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHT 659 (746)
Q Consensus 581 ~~~~~~ivHrDlkp~NILl~-~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~D 659 (746)
+. +|+||||||+||+++ .++.+||+|||+|+...... ......||+.|+|||++.+... ++.++|
T Consensus 159 ~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~---------~~~~~~~t~~y~aPE~~~~~~~--~~~~~D 224 (383)
T 3eb0_A 159 SL---GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE---------PSVAYICSRFYRAPELMLGATE--YTPSID 224 (383)
T ss_dssp TT---TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS---------CCCCCCCCSSCCCHHHHTTCSS--CCTHHH
T ss_pred HC---cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC---------CCcCcccCCCccCHHHhcCCCC--CCcchh
Confidence 99 999999999999997 68999999999998763322 2234678999999999987542 234599
Q ss_pred eeeccceee
Q 041467 660 VMSFPQRFA 668 (746)
Q Consensus 660 iwSlG~i~~ 668 (746)
|||+||++|
T Consensus 225 iwslG~il~ 233 (383)
T 3eb0_A 225 LWSIGCVFG 233 (383)
T ss_dssp HHHHHHHHH
T ss_pred hhhHHHHHH
Confidence 999999998
No 202
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=99.97 E-value=1.5e-32 Score=293.49 Aligned_cols=179 Identities=22% Similarity=0.285 Sum_probs=144.1
Q ss_pred hcCCCCCCeEeecCCeeEEE--------EEeehhhhhh--hhhhHHHHHHHHHhhcCCC--CceeeEEEEEecCCcccch
Q 041467 479 TNNFSPANKIREGGFNIVYN--------VAMKVANLKQ--KEASRSFAAEFNALRNIRH--RNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~--------vavK~~~~~~--~~~~~~~~~E~~~l~~l~H--pnIv~l~~~~~~~~~~~lv 546 (746)
.++|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++| |||+++++++...+..++|
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv 87 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMV 87 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred cCEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEE
Confidence 45789999999999999997 8999886432 3445679999999999986 9999999999999999999
Q ss_pred hhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCC
Q 041467 547 FKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 547 ~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~ 621 (746)
|| +.+|++. ...+++.++..++.|++.||+|||+. +|+||||||+|||++ ++.+||+|||+|+.......
T Consensus 88 ~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~ 162 (343)
T 3dbq_A 88 ME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT 162 (343)
T ss_dssp EC-CCSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC-----
T ss_pred Ee-CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeecccccccCcccc
Confidence 99 5677775 45789999999999999999999999 999999999999997 67899999999987643221
Q ss_pred CCCcccccccccccccccccccccccccc--------cccCCCccceeeccceee
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARN--------LENREKRHTVMSFPQRFA 668 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~--------~~~~~~~~DiwSlG~i~~ 668 (746)
.......+||+.|+|||++.+.. ...++.++|||||||++|
T Consensus 163 ------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ 211 (343)
T 3dbq_A 163 ------SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILY 211 (343)
T ss_dssp -------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHH
T ss_pred ------cccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHH
Confidence 11223467999999999997521 112344699999999998
No 203
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=99.97 E-value=4.2e-32 Score=285.96 Aligned_cols=177 Identities=21% Similarity=0.305 Sum_probs=145.6
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchh
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDF 547 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 547 (746)
.++|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVF 81 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEE
Confidence 36789999999999999997 8999875432 233567889999999999999999999999999999999
Q ss_pred hhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCC
Q 041467 548 KAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPG 622 (746)
Q Consensus 548 e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~ 622 (746)
||++++++. ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 82 e~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 156 (311)
T 4agu_A 82 EYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPS-- 156 (311)
T ss_dssp ECCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred EeCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcc--
Confidence 999998875 45689999999999999999999999 99999999999999999999999999998763221
Q ss_pred CCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 623 TTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 623 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.......||+.|+|||++.+... ++.++||||+||++|
T Consensus 157 ------~~~~~~~~~~~y~aPE~~~~~~~--~~~~~Di~slG~il~ 194 (311)
T 4agu_A 157 ------DYYDDEVATRWYRSPELLVGDTQ--YGPPVDVWAIGCVFA 194 (311)
T ss_dssp ---------------GGGCCHHHHHTCSC--CCTHHHHHHHHHHHH
T ss_pred ------cccCCCcCCccccChHHHhcCCC--CCcchhhHHHHHHHH
Confidence 11234678999999999976432 244699999999998
No 204
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=99.97 E-value=2.1e-32 Score=291.35 Aligned_cols=231 Identities=19% Similarity=0.261 Sum_probs=175.1
Q ss_pred hhcCCCCCCeEeecCCeeEEE----------------EEeehhhhhh-hhhhHHHHHHHHHhhcC-CCCceeeEEEEEec
Q 041467 478 ATNNFSPANKIREGGFNIVYN----------------VAMKVANLKQ-KEASRSFAAEFNALRNI-RHRNLIKIITICSS 539 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~----------------vavK~~~~~~-~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~ 539 (746)
..++|+..+.||+|+||.||+ ||||++.... ....+.+.+|+++++++ +||||+++++++..
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 112 (334)
T 2pvf_A 33 PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 112 (334)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred CHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence 457899999999999999995 7899886442 34456789999999999 89999999999999
Q ss_pred CCcccchhhhccCCccc-----c----------------cCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCee
Q 041467 540 IDFEGFDFKAISNGQLR-----L----------------CNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNIL 598 (746)
Q Consensus 540 ~~~~~lv~e~~~~g~l~-----~----------------~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NIL 598 (746)
.+..++||||+++|+|. . ..+++.++..++.||+.||+|||+. +|+||||||+||+
T Consensus 113 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIl 189 (334)
T 2pvf_A 113 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVL 189 (334)
T ss_dssp SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEE
T ss_pred CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccceEE
Confidence 99999999999999885 1 1388999999999999999999999 9999999999999
Q ss_pred eCCCCcEEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-cc---
Q 041467 599 LDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ--- 674 (746)
Q Consensus 599 l~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~--- 674 (746)
++.++.+||+|||+++....... ........||+.|+|||++.+..++.+ +||||+||++|.... ..
T Consensus 190 l~~~~~~kL~Dfg~~~~~~~~~~------~~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~il~ellt~g~~p~ 260 (334)
T 2pvf_A 190 VTENNVMKIADFGLARDINNIDY------YKKTTNGRLPVKWMAPEALFDRVYTHQ---SDVWSFGVLMWEIFTLGGSPY 260 (334)
T ss_dssp ECTTCCEEECCCTTCEECTTTSS------EECCSCCCCCGGGCCHHHHHHCEECHH---HHHHHHHHHHHHHHTTSCCSS
T ss_pred EcCCCCEEEcccccccccccccc------ccccCCCCcccceeChHHhcCCCcChH---HHHHHHHHHHHHHHhCCCCCc
Confidence 99999999999999987643221 111223567889999999988776554 999999999983221 10
Q ss_pred ----ccchhh---c--cccCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhcccC
Q 041467 675 ----NKSILK---S--AGIKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLRL 720 (746)
Q Consensus 675 ----~~~i~~---~--~~~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~ 720 (746)
...+.. . .........+.+..++..|+...|. ||+..++...++++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l 316 (334)
T 2pvf_A 261 PGIPVEELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316 (334)
T ss_dssp TTCCHHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CcCCHHHHHHHHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 001110 0 1111223344555555556666666 88888776655543
No 205
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=99.97 E-value=1.8e-32 Score=307.25 Aligned_cols=175 Identities=24% Similarity=0.341 Sum_probs=151.6
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccc
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~l 545 (746)
..++|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++|||||++++++.+.+..++
T Consensus 24 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~l 103 (484)
T 3nyv_A 24 FSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYL 103 (484)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEE
T ss_pred ccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 346799999999999999996 9999986442 3345679999999999999999999999999999999
Q ss_pred hhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeee---CCCCcEEEcccccccccc
Q 041467 546 DFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL---DQDVVTHVGDLGLAKFLY 617 (746)
Q Consensus 546 v~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl---~~~~~~ki~DfGla~~~~ 617 (746)
||||+.+|++. ...+++.++..++.||+.||+|||++ +|+||||||+||++ +.++.+||+|||+|+...
T Consensus 104 v~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 180 (484)
T 3nyv_A 104 VGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 180 (484)
T ss_dssp EECCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBC
T ss_pred EEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcc
Confidence 99999999985 46789999999999999999999999 99999999999999 467899999999998763
Q ss_pred CCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 618 GYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.. ......+||+.|+|||++.+ .+ +.++||||+||++|
T Consensus 181 ~~---------~~~~~~~gt~~y~aPE~~~~-~~---~~~~DiwslG~il~ 218 (484)
T 3nyv_A 181 AS---------KKMKDKIGTAYYIAPEVLHG-TY---DEKCDVWSTGVILY 218 (484)
T ss_dssp CC---------CSHHHHTTGGGTCCHHHHHT-CC---CTHHHHHHHHHHHH
T ss_pred cc---------cccccCCCCccccCceeecC-CC---CCcceeHHHHHHHH
Confidence 22 12234679999999999876 34 44699999999998
No 206
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=99.97 E-value=2.1e-32 Score=289.20 Aligned_cols=176 Identities=24% Similarity=0.323 Sum_probs=148.8
Q ss_pred CCCCCeEeecCCeeEEE-------------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecC--Ccccc
Q 041467 482 FSPANKIREGGFNIVYN-------------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSI--DFEGF 545 (746)
Q Consensus 482 ~~~~~~ig~g~~g~v~~-------------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~--~~~~l 545 (746)
|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++||||+++++++.+. ...++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 38899999999999953 8999987543 34456799999999999999999999999874 46789
Q ss_pred hhhhccCCccc----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCC
Q 041467 546 DFKAISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 546 v~e~~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~ 621 (746)
||||+++|+|. ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 113 v~e~~~~~~L~~~l~~~~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~ 189 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHE 189 (318)
T ss_dssp EECCCTTCBHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECCTTCS
T ss_pred EEecccCCcHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCcccccccccccc
Confidence 99999999986 45689999999999999999999999 999999999999999999999999999987643221
Q ss_pred CCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.........||..|+|||++.+..++.+ +||||+||++|
T Consensus 190 -----~~~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~il~ 228 (318)
T 3lxp_A 190 -----YYRVREDGDSPVFWYAPECLKEYKFYYA---SDVWSFGVTLY 228 (318)
T ss_dssp -----EEEC---CCCCGGGCCHHHHHHCEEEHH---HHHHHHHHHHH
T ss_pred -----ccccccCCCCCceeeChHHhcCCCCCcH---HHHHHHHHHHH
Confidence 1112233568899999999998877655 99999999998
No 207
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=99.97 E-value=3.6e-32 Score=305.22 Aligned_cols=175 Identities=22% Similarity=0.339 Sum_probs=146.1
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccch
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
..++|+..+.||+|+||.||+ ||||++.... ......+.+|+++++.++|||||+++++|.+....++|
T Consensus 35 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 114 (494)
T 3lij_A 35 LSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLV 114 (494)
T ss_dssp HHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred hhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 345789999999999999996 8999986543 33456789999999999999999999999999999999
Q ss_pred hhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCC---CCcEEEccccccccccC
Q 041467 547 FKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQ---DVVTHVGDLGLAKFLYG 618 (746)
Q Consensus 547 ~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~---~~~~ki~DfGla~~~~~ 618 (746)
||||++|++. ...+++.++..++.||+.||+|||+. +|+||||||+||+++. ++.+||+|||+|+....
T Consensus 115 ~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~ 191 (494)
T 3lij_A 115 MECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFEN 191 (494)
T ss_dssp EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBT
T ss_pred EecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCeECCC
Confidence 9999999985 45789999999999999999999999 9999999999999975 45699999999987632
Q ss_pred CCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 619 YEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 619 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
. ......+||+.|+|||++.+ .+ +.++||||+||++|
T Consensus 192 ~---------~~~~~~~gt~~y~aPE~l~~-~~---~~~~DiwslG~il~ 228 (494)
T 3lij_A 192 Q---------KKMKERLGTAYYIAPEVLRK-KY---DEKCDVWSIGVILF 228 (494)
T ss_dssp T---------BCBCCCCSCTTTCCHHHHTT-CB---CTHHHHHHHHHHHH
T ss_pred C---------ccccccCCCcCeeCHHHHcc-cC---CCchhHHHHHHHHH
Confidence 2 12234679999999999864 34 44699999999998
No 208
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=99.97 E-value=1.4e-32 Score=294.10 Aligned_cols=236 Identities=15% Similarity=0.156 Sum_probs=167.0
Q ss_pred hcCCCCCCeEeecCCeeEEE------------EEeehhhhhhh-----------hhhHHHHHHHHHhhcCCCCceeeEEE
Q 041467 479 TNNFSPANKIREGGFNIVYN------------VAMKVANLKQK-----------EASRSFAAEFNALRNIRHRNLIKIIT 535 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~------------vavK~~~~~~~-----------~~~~~~~~E~~~l~~l~HpnIv~l~~ 535 (746)
.++|+..+.||+|+||.||+ ||||+...... ...+.+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 36799999999999999997 78887753321 11234778999999999999999999
Q ss_pred EEec----CCcccchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCC--c
Q 041467 536 ICSS----IDFEGFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDV--V 604 (746)
Q Consensus 536 ~~~~----~~~~~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~--~ 604 (746)
++.. ....++||||+ +|+|. ...+++.++..++.||+.||+|||+. +|+||||||+||+++.++ .
T Consensus 116 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~ 191 (345)
T 2v62_A 116 SGLTEFKGRSYRFMVMERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKNPDQ 191 (345)
T ss_dssp EEEEESSSCEEEEEEEECE-EEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESSSTTS
T ss_pred ccccccCCCcEEEEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccCCCCc
Confidence 9988 67899999999 88886 33789999999999999999999999 999999999999998777 9
Q ss_pred EEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccccc---------c
Q 041467 605 THVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEKKQ---------N 675 (746)
Q Consensus 605 ~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~~~---------~ 675 (746)
+||+|||+|+.+........ ..........||+.|+|||++.+..++.+ +|||||||++|...... .
T Consensus 192 ~kL~Dfg~a~~~~~~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~---~Di~slG~il~ell~g~~pf~~~~~~~ 267 (345)
T 2v62_A 192 VYLADYGLSYRYCPNGNHKQ-YQENPRKGHNGTIEFTSLDAHKGVALSRR---SDVEILGYCMLRWLCGKLPWEQNLKDP 267 (345)
T ss_dssp EEECCCTTCEESSGGGCCCC-CCCCGGGCSCSCTTTCCHHHHHTCCCCHH---HHHHHHHHHHHHHHHSSCTTGGGTTCH
T ss_pred EEEEeCCCceeccccccccc-chhccccccCCCccccCHHHhcCCCCCch---hhHHHHHHHHHHHHhCCCCcccccccc
Confidence 99999999987643322110 11122245689999999999998876554 99999999998211110 0
Q ss_pred cch-------hhccc------cCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhcccCCC
Q 041467 676 KSI-------LKSAG------IKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLRLPS 722 (746)
Q Consensus 676 ~~i-------~~~~~------~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~~~ 722 (746)
..+ ....+ .+.....+.+..++..|+...|. ||+..++...++.+..
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~~ 328 (345)
T 2v62_A 268 VAVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPHGI 328 (345)
T ss_dssp HHHHHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTTCC
T ss_pred HHHHHHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhccCC
Confidence 000 00000 00113333455555555555666 8899988877776543
No 209
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=5.7e-33 Score=298.09 Aligned_cols=179 Identities=22% Similarity=0.258 Sum_probs=150.5
Q ss_pred hcCCCCCCeEeecCCeeEEE------------EEeehhhhhh----hhhhHHHHHHHHHhhcC-CCCceeeEEEEEecCC
Q 041467 479 TNNFSPANKIREGGFNIVYN------------VAMKVANLKQ----KEASRSFAAEFNALRNI-RHRNLIKIITICSSID 541 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~------------vavK~~~~~~----~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~~~ 541 (746)
.++|+..+.||+|+||.||+ ||||++.... ....+.+.+|+++++++ +||||+++++++...+
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 46799999999999999995 8999886432 22345678899999999 6999999999999999
Q ss_pred cccchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccc
Q 041467 542 FEGFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFL 616 (746)
Q Consensus 542 ~~~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~ 616 (746)
..++||||+++|+|. ...+++.++..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 209 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKEF 209 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSEEEEC
T ss_pred eEEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCCCeec
Confidence 999999999999986 45789999999999999999999999 9999999999999999999999999999865
Q ss_pred cCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 617 YGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.... .......+||+.|+|||++.+... .++.++|||||||++|
T Consensus 210 ~~~~-------~~~~~~~~gt~~y~aPE~~~~~~~-~~~~~~DvwslG~il~ 253 (355)
T 1vzo_A 210 VADE-------TERAYDFCGTIEYMAPDIVRGGDS-GHDKAVDWWSLGVLMY 253 (355)
T ss_dssp CGGG-------GGGGCGGGSCCTTCCHHHHTTCC----CTHHHHHHHHHHHH
T ss_pred ccCC-------CCcccCcccCcCccChhhhcCCCC-CCCchhhHHHHHHHHH
Confidence 3211 122334689999999999986432 1244699999999998
No 210
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.97 E-value=1.2e-32 Score=283.39 Aligned_cols=176 Identities=20% Similarity=0.340 Sum_probs=151.4
Q ss_pred hcCCCCCCeEeecCCeeEEE--------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhc
Q 041467 479 TNNFSPANKIREGGFNIVYN--------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAI 550 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~--------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~ 550 (746)
.++|+..+.||+|+||.||+ ||+|++..... ..+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFM 85 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCC
T ss_pred hhheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCC
Confidence 46788899999999999996 89999865432 3467899999999999999999999999999999999999
Q ss_pred cCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCC
Q 041467 551 SNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTT 624 (746)
Q Consensus 551 ~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~ 624 (746)
++|++. ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 86 ~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~----- 157 (267)
T 3t9t_A 86 EHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDD----- 157 (267)
T ss_dssp TTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCH-----
T ss_pred CCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEcccccccccccc-----
Confidence 999886 24589999999999999999999999 9999999999999999999999999999865321
Q ss_pred cccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 625 AETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 625 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.........||..|+|||++.+..++. ++||||+||++|
T Consensus 158 --~~~~~~~~~~~~~y~aPE~~~~~~~~~---~~Di~slG~il~ 196 (267)
T 3t9t_A 158 --QYTSSTGTKFPVKWASPEVFSFSRYSS---KSDVWSFGVLMW 196 (267)
T ss_dssp --HHHSTTSTTCCGGGCCHHHHHHCCCCH---HHHHHHHHHHHH
T ss_pred --cccccccccccccccChhhhcCCCccc---hhchhhhHHHHH
Confidence 111223356788999999998777655 499999999998
No 211
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=99.97 E-value=6.5e-33 Score=292.08 Aligned_cols=230 Identities=20% Similarity=0.260 Sum_probs=165.7
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhh---hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccc
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLK---QKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~l 545 (746)
..++|+..+.||+|+||.||+ ||||++... .....+.+.+|++++++++||||+++++++...+..++
T Consensus 30 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l 109 (310)
T 2wqm_A 30 TLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNI 109 (310)
T ss_dssp SGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEE
T ss_pred cccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEE
Confidence 446799999999999999997 899988643 23445678999999999999999999999999999999
Q ss_pred hhhhccCCccc---------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccc
Q 041467 546 DFKAISNGQLR---------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFL 616 (746)
Q Consensus 546 v~e~~~~g~l~---------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~ 616 (746)
||||+.+|++. ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 110 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~ 186 (310)
T 2wqm_A 110 VLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFF 186 (310)
T ss_dssp EEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC------
T ss_pred EEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEeccceeee
Confidence 99999999885 34589999999999999999999999 9999999999999999999999999999865
Q ss_pred cCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccccc------------ccchhhc---
Q 041467 617 YGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEKKQ------------NKSILKS--- 681 (746)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~~~------------~~~i~~~--- 681 (746)
.... .......||+.|+|||++.+..++.+ +|||||||++|...... .......
T Consensus 187 ~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~---~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~ 255 (310)
T 2wqm_A 187 SSKT--------TAAHSLVGTPYYMSPERIHENGYNFK---SDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDY 255 (310)
T ss_dssp --------------------CCSSCCHHHHTTCCCCHH---HHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTCS
T ss_pred cCCC--------ccccccCCCeeEeChHHhCCCCCCch---hhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcccC
Confidence 3221 11223578999999999988776554 99999999998211110 0000111
Q ss_pred cccCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhcccCC
Q 041467 682 AGIKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLRLP 721 (746)
Q Consensus 682 ~~~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~~ 721 (746)
.+.+.....+.+..++..|+...|. ||+..++...+.++-
T Consensus 256 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~ 296 (310)
T 2wqm_A 256 PPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMH 296 (310)
T ss_dssp CCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCcccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHH
Confidence 1111123344555555556666666 888887776666543
No 212
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=99.97 E-value=1.2e-32 Score=290.48 Aligned_cols=233 Identities=20% Similarity=0.301 Sum_probs=164.4
Q ss_pred HhhhhcCCCCCCeEeecCCeeEEE------------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecC
Q 041467 475 LSKATNNFSPANKIREGGFNIVYN------------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSI 540 (746)
Q Consensus 475 ~~~~~~~~~~~~~ig~g~~g~v~~------------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~ 540 (746)
+....++|...+.||+|+||.||+ ||||++.... ....+.+.+|++++++++||||+++++++.+.
T Consensus 29 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 108 (313)
T 3brb_A 29 VVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEM 108 (313)
T ss_dssp TBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-
T ss_pred cccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeec
Confidence 334567889999999999999994 8999886542 34456799999999999999999999999876
Q ss_pred Cc-----ccchhhhccCCccc-----------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCc
Q 041467 541 DF-----EGFDFKAISNGQLR-----------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVV 604 (746)
Q Consensus 541 ~~-----~~lv~e~~~~g~l~-----------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~ 604 (746)
+. .++||||+++|++. ...+++.++..++.|+++||+|||+. +|+||||||+||+++.++.
T Consensus 109 ~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~ 185 (313)
T 3brb_A 109 SSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMT 185 (313)
T ss_dssp ------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSC
T ss_pred cccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCc
Confidence 53 48999999999885 24589999999999999999999999 9999999999999999999
Q ss_pred EEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-cc-------cc
Q 041467 605 THVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ-------NK 676 (746)
Q Consensus 605 ~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~-------~~ 676 (746)
+||+|||+++........ .......|++.|+|||++.+..++.+ +|||||||++|.... .. ..
T Consensus 186 ~kl~Dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~il~el~~~g~~p~~~~~~~ 256 (313)
T 3brb_A 186 VCVADFGLSKKIYSGDYY------RQGRIAKMPVKWIAIESLADRVYTSK---SDVWAFGVTMWEIATRGMTPYPGVQNH 256 (313)
T ss_dssp EEECSCSCC----------------------CCGGGSCHHHHHSSCCCHH---HHHHHHHHHHHHHHTTSCCSSTTCCGG
T ss_pred EEEeecCcceeccccccc------CcccccCCCccccCchhhcCCCccch---hhhHHHHHHHHHHHhcCCCCCccCCHH
Confidence 999999999876432211 11223557889999999988777554 999999999982221 10 01
Q ss_pred chh----hc-cccCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhccc
Q 041467 677 SIL----KS-AGIKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLR 719 (746)
Q Consensus 677 ~i~----~~-~~~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~ 719 (746)
.+. .. .........+.+..++..|+...|. ||+..++...+..
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~ 305 (313)
T 3brb_A 257 EMYDYLLHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEK 305 (313)
T ss_dssp GHHHHHHTTCCCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 111 10 1111233345555666666666666 7887766654443
No 213
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=99.97 E-value=1.4e-32 Score=287.60 Aligned_cols=180 Identities=16% Similarity=0.244 Sum_probs=151.1
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcC-CCCceeeEEEEEecCCcccchhh
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNI-RHRNLIKIITICSSIDFEGFDFK 548 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~~~~~~lv~e 548 (746)
.++|+..+.||+|+||.||+ ||||++.... ..+.+.+|+++++++ +||||+++++++......++|||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e 86 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVID 86 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEE
Confidence 45799999999999999997 8999875332 334588999999999 79999999999999999999999
Q ss_pred hccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCc-----EEEcccccccccc
Q 041467 549 AISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVV-----THVGDLGLAKFLY 617 (746)
Q Consensus 549 ~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~-----~ki~DfGla~~~~ 617 (746)
|+ +|+|. ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++. +||+|||+|+...
T Consensus 87 ~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~ 162 (298)
T 1csn_A 87 LL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYR 162 (298)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESB
T ss_pred ec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECccccccc
Confidence 99 88886 34689999999999999999999999 9999999999999987776 9999999998775
Q ss_pred CCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 618 GYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
....... ..........||+.|+|||++.+..++.+ +|||||||++|
T Consensus 163 ~~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~---~Di~slG~il~ 209 (298)
T 1csn_A 163 DPVTKQH-IPYREKKNLSGTARYMSINTHLGREQSRR---DDLEALGHVFM 209 (298)
T ss_dssp CTTTCCB-CCCCCCCCCCSCTTTCCHHHHTTCCCCHH---HHHHHHHHHHH
T ss_pred ccccccc-ccccCccCCCCCcccCCchhhcCCCCChH---HHHHHHHHHHH
Confidence 4332111 01112345789999999999988777554 99999999998
No 214
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=99.97 E-value=3.2e-32 Score=282.79 Aligned_cols=175 Identities=25% Similarity=0.298 Sum_probs=148.8
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhhh------hhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcc
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQK------EASRSFAAEFNALRNIRHRNLIKIITICSSIDFE 543 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~------~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~ 543 (746)
.++|+..+.||+|+||.||+ ||||++..... ...+.+.+|++++++++||||+++++++...+..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~ 83 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDV 83 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeE
Confidence 35688999999999999997 89998764321 1356799999999999999999999999999999
Q ss_pred cchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCC----cEEEccccccc
Q 041467 544 GFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDV----VTHVGDLGLAK 614 (746)
Q Consensus 544 ~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~----~~ki~DfGla~ 614 (746)
++||||++++++. ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++ .+||+|||+++
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~ 160 (283)
T 3bhy_A 84 VLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH 160 (283)
T ss_dssp EEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred EEEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEecccce
Confidence 9999999999986 45789999999999999999999999 999999999999998877 89999999998
Q ss_pred cccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 615 FLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
...... ......||+.|+|||++.+..++. ++||||+||++|
T Consensus 161 ~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~---~~Di~slG~il~ 202 (283)
T 3bhy_A 161 KIEAGN---------EFKNIFGTPEFVAPEIVNYEPLGL---EADMWSIGVITY 202 (283)
T ss_dssp ECC-----------------CCCGGGCCHHHHTTCCCCT---HHHHHHHHHHHH
T ss_pred eccCCC---------cccccCCCcCccCcceecCCCCCc---chhhhhHHHHHH
Confidence 753221 122356899999999998776654 599999999998
No 215
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=99.97 E-value=5.9e-33 Score=289.07 Aligned_cols=178 Identities=21% Similarity=0.356 Sum_probs=153.6
Q ss_pred hhhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchh
Q 041467 477 KATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDF 547 (746)
Q Consensus 477 ~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 547 (746)
...++|+..+.||+|+||.||+ ||||++... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 10 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 88 (288)
T 3kfa_A 10 MERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 88 (288)
T ss_dssp CCGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC-STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEE
T ss_pred ccccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEE
Confidence 3567889999999999999997 899988643 234567899999999999999999999999999999999
Q ss_pred hhccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCC
Q 041467 548 KAISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620 (746)
Q Consensus 548 e~~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~ 620 (746)
||+++|++. ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 89 e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 165 (288)
T 3kfa_A 89 EFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT 165 (288)
T ss_dssp ECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSS
T ss_pred EcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceeccCCc
Confidence 999999885 34589999999999999999999999 99999999999999999999999999998764321
Q ss_pred CCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 621 PGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 621 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
. .......||+.|+|||++.+..++.+ +||||+||++|
T Consensus 166 ~-------~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~il~ 203 (288)
T 3kfa_A 166 Y-------TAHAGAKFPIKWTAPESLAYNKFSIK---SDVWAFGVLLW 203 (288)
T ss_dssp S-------EEETTEEECGGGCCHHHHHHCCCCHH---HHHHHHHHHHH
T ss_pred c-------ccccCCccccCcCChhhhccCCCCch---hhHHHHHHHHH
Confidence 1 22233567889999999988777554 99999999988
No 216
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=99.97 E-value=1.5e-32 Score=285.01 Aligned_cols=177 Identities=21% Similarity=0.318 Sum_probs=148.0
Q ss_pred hhcCCCCCCeEeecCCeeEEE------------EEeehhhhh-hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCccc
Q 041467 478 ATNNFSPANKIREGGFNIVYN------------VAMKVANLK-QKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEG 544 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~------------vavK~~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~ 544 (746)
..++|+..+.||+|+||.||+ ||||++... .....+.+.+|++++++++||||+++++++.+ +..+
T Consensus 10 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~ 88 (281)
T 3cc6_A 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTW 88 (281)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCE
T ss_pred cccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCE
Confidence 456889999999999999996 799988654 23445779999999999999999999999865 4568
Q ss_pred chhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccC
Q 041467 545 FDFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618 (746)
Q Consensus 545 lv~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~ 618 (746)
+||||+++|++. ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 89 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 165 (281)
T 3cc6_A 89 IIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRYIED 165 (281)
T ss_dssp EEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGGCC--
T ss_pred EEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCccccc
Confidence 999999999986 34589999999999999999999999 999999999999999999999999999987643
Q ss_pred CCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 619 YEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 619 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
... .......||+.|+|||++.+..++.+ +|||||||++|
T Consensus 166 ~~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~il~ 205 (281)
T 3cc6_A 166 EDY-------YKASVTRLPIKWMSPESINFRRFTTA---SDVWMFAVCMW 205 (281)
T ss_dssp --------------CCCCCGGGCCHHHHHHCCCCHH---HHHHHHHHHHH
T ss_pred ccc-------cccccCCCCcceeCchhhccCCCCch---hccHHHHHHHH
Confidence 221 11223557889999999987776554 99999999998
No 217
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=3.3e-32 Score=290.18 Aligned_cols=186 Identities=22% Similarity=0.231 Sum_probs=146.1
Q ss_pred hhhhcCCCCCCeEeecCCeeEEE-------EEeehhhhhhhhhhHHHHHHHHHhhc--CCCCceeeEEEEEecC----Cc
Q 041467 476 SKATNNFSPANKIREGGFNIVYN-------VAMKVANLKQKEASRSFAAEFNALRN--IRHRNLIKIITICSSI----DF 542 (746)
Q Consensus 476 ~~~~~~~~~~~~ig~g~~g~v~~-------vavK~~~~~~~~~~~~~~~E~~~l~~--l~HpnIv~l~~~~~~~----~~ 542 (746)
....++|+..+.||+|+||.||+ ||||++.... ...+.+|.+++.. ++||||+++++++... ..
T Consensus 33 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 109 (337)
T 3mdy_A 33 RTIAKQIQMVKQIGKGRYGEVWMGKWRGEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQ 109 (337)
T ss_dssp TTHHHHCEEEEEEEEETTEEEEEEEETTEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCE
T ss_pred cccccceEEEeEeecCCCeEEEEEEECCceEEEEEEeccc---cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCc
Confidence 34557899999999999999997 9999985332 2334455555544 5899999999999887 67
Q ss_pred ccchhhhccCCccc----ccCCCHHHHHHHHHHHHHHHHHHHhcC-----CCCeEEcCCCCCCeeeCCCCcEEEcccccc
Q 041467 543 EGFDFKAISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHHC-----QPSIVHGDLKPSNILLDQDVVTHVGDLGLA 613 (746)
Q Consensus 543 ~~lv~e~~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~~-----~~~ivHrDlkp~NILl~~~~~~ki~DfGla 613 (746)
.++||||+++|+|. ...+++.++..++.|++.|++|||+.+ .++|+||||||+||+++.++.+||+|||+|
T Consensus 110 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a 189 (337)
T 3mdy_A 110 LYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 189 (337)
T ss_dssp EEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTC
T ss_pred eEEEEeccCCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCc
Confidence 89999999999986 457899999999999999999999762 348999999999999999999999999999
Q ss_pred ccccCCCCCCCcccccccccccccccccccccccccccccC---CCccceeeccceee
Q 041467 614 KFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENR---EKRHTVMSFPQRFA 668 (746)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~---~~~~DiwSlG~i~~ 668 (746)
+........ .........||+.|+|||++.+...... +.++|||||||++|
T Consensus 190 ~~~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~ 243 (337)
T 3mdy_A 190 VKFISDTNE----VDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILW 243 (337)
T ss_dssp EECC-------------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHH
T ss_pred eeecccccc----ccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHH
Confidence 876433221 1111234679999999999987655332 12489999999998
No 218
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=99.97 E-value=8.4e-32 Score=283.40 Aligned_cols=178 Identities=19% Similarity=0.212 Sum_probs=143.8
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccc
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~l 545 (746)
..++|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++||||+++++++...+..++
T Consensus 32 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~l 111 (309)
T 2h34_A 32 QFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYV 111 (309)
T ss_dssp --CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEE
T ss_pred EeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEE
Confidence 457899999999999999997 8999986543 2334678999999999999999999999999999999
Q ss_pred hhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCC
Q 041467 546 DFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620 (746)
Q Consensus 546 v~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~ 620 (746)
||||+++++|. ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 112 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 188 (309)
T 2h34_A 112 DMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASATTDEK 188 (309)
T ss_dssp EEECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC--------
T ss_pred EEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCccccccc
Confidence 99999999886 35689999999999999999999999 99999999999999999999999999997653321
Q ss_pred CCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 621 PGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 621 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
. .......||+.|+|||++.+..++. ++|||||||++|
T Consensus 189 ~-------~~~~~~~~~~~y~aPE~~~~~~~~~---~~Di~slG~il~ 226 (309)
T 2h34_A 189 L-------TQLGNTVGTLYYMAPERFSESHATY---RADIYALTCVLY 226 (309)
T ss_dssp ---------------CCGGGCCGGGTCC----C---CCHHHHHHHHHH
T ss_pred c-------ccccccCCCcCccCHHHHcCCCCCc---hHhHHHHHHHHH
Confidence 1 1122467899999999998876655 499999999998
No 219
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=99.97 E-value=2.7e-32 Score=296.39 Aligned_cols=178 Identities=21% Similarity=0.282 Sum_probs=144.8
Q ss_pred cCCCCCCeEeecCCeeEEE--------EEeehhhhhh--hhhhHHHHHHHHHhhcCC--CCceeeEEEEEecCCcccchh
Q 041467 480 NNFSPANKIREGGFNIVYN--------VAMKVANLKQ--KEASRSFAAEFNALRNIR--HRNLIKIITICSSIDFEGFDF 547 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~--------vavK~~~~~~--~~~~~~~~~E~~~l~~l~--HpnIv~l~~~~~~~~~~~lv~ 547 (746)
.+|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++ |||||++++++...+..++||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 4699999999999999997 8999886442 345577999999999997 599999999999999999999
Q ss_pred hhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCC
Q 041467 548 KAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPG 622 (746)
Q Consensus 548 e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~ 622 (746)
| +.+|+|. ...+++.++..++.||+.||+|||+. +|+||||||+|||++ ++.+||+|||+|+.+.....
T Consensus 136 E-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~- 209 (390)
T 2zmd_A 136 E-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT- 209 (390)
T ss_dssp E-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC------
T ss_pred e-cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCccccccCCCc-
Confidence 9 5677775 45789999999999999999999999 999999999999996 58999999999987643221
Q ss_pred CCccccccccccccccccccccccccccc--------ccCCCccceeeccceee
Q 041467 623 TTAETASSSIGINGTVGYVAPVIIAARNL--------ENREKRHTVMSFPQRFA 668 (746)
Q Consensus 623 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~--------~~~~~~~DiwSlG~i~~ 668 (746)
.......+||+.|||||++.+... ..++.++|||||||++|
T Consensus 210 -----~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ 258 (390)
T 2zmd_A 210 -----SVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILY 258 (390)
T ss_dssp ---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHH
T ss_pred -----cccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHH
Confidence 111234679999999999976311 12355699999999999
No 220
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=99.97 E-value=6.4e-32 Score=283.73 Aligned_cols=181 Identities=19% Similarity=0.278 Sum_probs=147.7
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh----hhhhHHHHHHHHHhhcCCCCceeeEEEEEec--CCc
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ----KEASRSFAAEFNALRNIRHRNLIKIITICSS--IDF 542 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~----~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~--~~~ 542 (746)
..++|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++||||+++++++.. ...
T Consensus 3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 82 (305)
T 2wtk_C 3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQK 82 (305)
T ss_dssp --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---C
T ss_pred cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCe
Confidence 347899999999999999997 8999986543 2345679999999999999999999999854 457
Q ss_pred ccchhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccc
Q 041467 543 EGFDFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFL 616 (746)
Q Consensus 543 ~~lv~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~ 616 (746)
.++||||+.+|... ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 83 ~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~ 159 (305)
T 2wtk_C 83 MYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEAL 159 (305)
T ss_dssp EEEEEECCSEEHHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEehhccCCHHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeecccccccc
Confidence 89999999877322 45689999999999999999999999 9999999999999999999999999999876
Q ss_pred cCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 617 YGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
...... .......||+.|+|||++.+.... .+.++||||+||++|
T Consensus 160 ~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~-~~~~~Di~slG~il~ 204 (305)
T 2wtk_C 160 HPFAAD------DTCRTSQGSPAFQPPEIANGLDTF-SGFKVDIWSAGVTLY 204 (305)
T ss_dssp CTTCSS------CEECCCCSCGGGCCHHHHTCCSCE-ESHHHHHHHHHHHHH
T ss_pred Cccccc------cccccCCCCCCCcChhhccCcccC-CcchhhHHHHHHHHH
Confidence 432211 122346799999999999764321 134699999999998
No 221
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=99.97 E-value=1e-32 Score=293.76 Aligned_cols=183 Identities=19% Similarity=0.261 Sum_probs=154.3
Q ss_pred HHhhhhcCCCCCCeEeecCCeeEEE--------------EEeehhhhhh-hhhhHHHHHHHHHhhcC-CCCceeeEEEEE
Q 041467 474 ELSKATNNFSPANKIREGGFNIVYN--------------VAMKVANLKQ-KEASRSFAAEFNALRNI-RHRNLIKIITIC 537 (746)
Q Consensus 474 ~~~~~~~~~~~~~~ig~g~~g~v~~--------------vavK~~~~~~-~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~ 537 (746)
++....++|+..+.||+|+||.||+ ||||++.... ....+.+.+|+++++++ +||||+++++++
T Consensus 40 ~~~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~ 119 (333)
T 2i1m_A 40 KWEFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGAC 119 (333)
T ss_dssp GGBCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred cccCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEE
Confidence 3444567899999999999999996 7888876442 33456799999999999 899999999999
Q ss_pred ecCCcccchhhhccCCccc-------------------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCee
Q 041467 538 SSIDFEGFDFKAISNGQLR-------------------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNIL 598 (746)
Q Consensus 538 ~~~~~~~lv~e~~~~g~l~-------------------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NIL 598 (746)
...+..++||||+++|+|. ...+++..+..++.|++.||+|||+. +|+||||||+||+
T Consensus 120 ~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl 196 (333)
T 2i1m_A 120 THGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVL 196 (333)
T ss_dssp CSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCE
T ss_pred ecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEE
Confidence 9999999999999999885 12478999999999999999999999 9999999999999
Q ss_pred eCCCCcEEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 599 LDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 599 l~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
++.++.+||+|||+++........ .......||+.|+|||++.+..++.+ +|||||||++|
T Consensus 197 ~~~~~~~kl~Dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~il~ 257 (333)
T 2i1m_A 197 LTNGHVAKIGDFGLARDIMNDSNY------IVKGNARLPVKWMAPESIFDCVYTVQ---SDVWSYGILLW 257 (333)
T ss_dssp EEGGGEEEBCCCGGGCCGGGCTTS------EECSSCEECGGGSCHHHHHHCCCCHH---HHHHHHHHHHH
T ss_pred ECCCCeEEECccccccccccccce------eecCCCCCCccccCHHHhccCCCChH---HHHHHHHHHHH
Confidence 999999999999999876432211 11223567889999999988776554 99999999998
No 222
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=99.97 E-value=3.5e-32 Score=285.50 Aligned_cols=177 Identities=20% Similarity=0.272 Sum_probs=154.2
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchh
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDF 547 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 547 (746)
..+.|+..+.||+|+||.||+ ||||++.... ....+.+.+|+.++++++||||+++++++...+..++||
T Consensus 20 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 99 (303)
T 3a7i_A 20 PEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIM 99 (303)
T ss_dssp GGGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hHHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEE
Confidence 345688999999999999997 8999986543 334577999999999999999999999999999999999
Q ss_pred hhccCCccc----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCC
Q 041467 548 KAISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623 (746)
Q Consensus 548 e~~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~ 623 (746)
||+++|++. ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 100 e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~-- 174 (303)
T 3a7i_A 100 EYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI-- 174 (303)
T ss_dssp ECCTTEEHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBC--
T ss_pred EeCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecCcccc--
Confidence 999998886 45789999999999999999999999 999999999999999999999999999987643211
Q ss_pred CcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 624 TAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 624 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......||+.|+|||++.+..++. ++|||||||++|
T Consensus 175 ------~~~~~~~~~~y~aPE~~~~~~~~~---~~Di~slG~il~ 210 (303)
T 3a7i_A 175 ------KRNTFVGTPFWMAPEVIKQSAYDS---KADIWSLGITAI 210 (303)
T ss_dssp ------CBCCCCSCGGGCCHHHHTTCCBCT---HHHHHHHHHHHH
T ss_pred ------ccCccCCCcCccCHHHHhcCCCCc---hhhhHHHHHHHH
Confidence 123467899999999998877655 499999999998
No 223
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=99.97 E-value=5.6e-32 Score=287.60 Aligned_cols=172 Identities=19% Similarity=0.296 Sum_probs=147.8
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCC-CCceeeEEEEEec--CCcccch
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIR-HRNLIKIITICSS--IDFEGFD 546 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~-HpnIv~l~~~~~~--~~~~~lv 546 (746)
.++|+..+.||+|+||.||+ ||||++.. ...+.+.+|++++++++ ||||+++++++.+ ....++|
T Consensus 35 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv 111 (330)
T 3nsz_A 35 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKP---VKKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALV 111 (330)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS---CCHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEE
T ss_pred CCceEEEEEecccCCeEEEEEEECCCCcEEEEEEecc---cchHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEE
Confidence 46799999999999999997 89999863 33467899999999997 9999999999988 5578999
Q ss_pred hhhccCCccc--ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCC-cEEEccccccccccCCCCCC
Q 041467 547 FKAISNGQLR--LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDV-VTHVGDLGLAKFLYGYEPGT 623 (746)
Q Consensus 547 ~e~~~~g~l~--~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~-~~ki~DfGla~~~~~~~~~~ 623 (746)
|||+.++++. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||+|+......
T Consensus 112 ~e~~~~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~--- 185 (330)
T 3nsz_A 112 FEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ--- 185 (330)
T ss_dssp EECCCCCCHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTC---
T ss_pred EeccCchhHHHHHHhCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCC---
Confidence 9999999886 45689999999999999999999999 999999999999999766 89999999998753221
Q ss_pred Cccccccccccccccccccccccccc-ccccCCCccceeeccceee
Q 041467 624 TAETASSSIGINGTVGYVAPVIIAAR-NLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 624 ~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~~~~~DiwSlG~i~~ 668 (746)
......||..|+|||++.+. .+ +.++||||+||++|
T Consensus 186 ------~~~~~~~~~~y~aPE~~~~~~~~---~~~~DiwslG~il~ 222 (330)
T 3nsz_A 186 ------EYNVRVASRYFKGPELLVDYQMY---DYSLDMWSLGCMLA 222 (330)
T ss_dssp ------CCCSCCSCGGGCCHHHHTTCCCC---CTHHHHHHHHHHHH
T ss_pred ------ccccccccccccChhhhcCCCcC---CchhhHHHHHHHHH
Confidence 12235789999999999773 34 34699999999998
No 224
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=99.97 E-value=6.4e-32 Score=280.87 Aligned_cols=174 Identities=24% Similarity=0.318 Sum_probs=145.8
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhh
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFK 548 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e 548 (746)
.++|...+.||+|+||.||+ ||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 100 (285)
T 3is5_A 21 DDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVME 100 (285)
T ss_dssp HHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEE
Confidence 46788999999999999996 8999886543 2345779999999999999999999999999999999999
Q ss_pred hccCCccc---------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeee---CCCCcEEEccccccccc
Q 041467 549 AISNGQLR---------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL---DQDVVTHVGDLGLAKFL 616 (746)
Q Consensus 549 ~~~~g~l~---------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl---~~~~~~ki~DfGla~~~ 616 (746)
|+++|++. ...+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++..
T Consensus 101 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~ 177 (285)
T 3is5_A 101 TCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELF 177 (285)
T ss_dssp CCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC-
T ss_pred eCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeecceec
Confidence 99999885 25689999999999999999999999 99999999999999 45688999999999865
Q ss_pred cCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 617 YGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.... ......||+.|+|||++.+ .++ .++||||+||++|
T Consensus 178 ~~~~---------~~~~~~~t~~y~aPE~~~~-~~~---~~~Di~slG~il~ 216 (285)
T 3is5_A 178 KSDE---------HSTNAAGTALYMAPEVFKR-DVT---FKCDIWSAGVVMY 216 (285)
T ss_dssp ------------------CTTGGGCCHHHHTT-CCC---HHHHHHHHHHHHH
T ss_pred CCcc---------cCcCcccccCcCChHHhcc-CCC---cccCeehHHHHHH
Confidence 3221 1234678999999999864 343 4599999999998
No 225
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=99.97 E-value=1.5e-32 Score=299.38 Aligned_cols=175 Identities=22% Similarity=0.315 Sum_probs=148.5
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCC--cccch
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSID--FEGFD 546 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~--~~~lv 546 (746)
.++|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++|||||++++++...+ ..++|
T Consensus 8 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv 87 (396)
T 4eut_A 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLI 87 (396)
T ss_dssp SEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEE
T ss_pred CCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEE
Confidence 46789999999999999997 8999987543 334567889999999999999999999998765 67899
Q ss_pred hhhccCCccc--------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeee----CCCCcEEEccccccc
Q 041467 547 FKAISNGQLR--------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL----DQDVVTHVGDLGLAK 614 (746)
Q Consensus 547 ~e~~~~g~l~--------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl----~~~~~~ki~DfGla~ 614 (746)
|||+++|+|. ...+++.++..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+|+
T Consensus 88 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~ 164 (396)
T 4eut_A 88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (396)
T ss_dssp ECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGGGCE
T ss_pred EecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCCCce
Confidence 9999999885 12289999999999999999999999 99999999999999 778889999999998
Q ss_pred cccCCCCCCCcccccccccccccccccccccccc--------cccccCCCccceeeccceee
Q 041467 615 FLYGYEPGTTAETASSSIGINGTVGYVAPVIIAA--------RNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--------~~~~~~~~~~DiwSlG~i~~ 668 (746)
..... .......||+.|+|||++.+ ..++ .++|||||||++|
T Consensus 165 ~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~---~~~DiwSlG~il~ 214 (396)
T 4eut_A 165 ELEDD---------EQFVSLYGTEEYLHPDMYERAVLRKDHQKKYG---ATVDLWSIGVTFY 214 (396)
T ss_dssp ECCCG---------GGSSCSSSCCTTCCHHHHHHHCC--CHHHHHH---HHHHHHHHHHHHH
T ss_pred EccCC---------CccccccCCccccCHHHhhccccccccccCCC---cHHHHHHHHHHHH
Confidence 75321 12234679999999999875 3343 3599999999998
No 226
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=99.97 E-value=4.4e-32 Score=284.89 Aligned_cols=175 Identities=25% Similarity=0.338 Sum_probs=149.3
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhh
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFK 548 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e 548 (746)
..++|...+.||+|+||.||+ ||||++........+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (304)
T 2jam_A 7 IRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQ 86 (304)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEE
Confidence 346788999999999999996 89999875544445678999999999999999999999999999999999
Q ss_pred hccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeee---CCCCcEEEccccccccccCCC
Q 041467 549 AISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL---DQDVVTHVGDLGLAKFLYGYE 620 (746)
Q Consensus 549 ~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl---~~~~~~ki~DfGla~~~~~~~ 620 (746)
|+++|++. ...+++.++..++.|++.|++|||+. +|+||||||+||++ +.++.+||+|||+++....
T Consensus 87 ~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~-- 161 (304)
T 2jam_A 87 LVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQN-- 161 (304)
T ss_dssp CCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCC--
T ss_pred cCCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcceecCC--
Confidence 99999885 45689999999999999999999999 99999999999999 7889999999999875321
Q ss_pred CCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 621 PGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 621 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.......||+.|+|||++.+..++. ++||||+||++|
T Consensus 162 --------~~~~~~~~~~~y~aPE~~~~~~~~~---~~Di~slG~il~ 198 (304)
T 2jam_A 162 --------GIMSTACGTPGYVAPEVLAQKPYSK---AVDCWSIGVITY 198 (304)
T ss_dssp --------BTTHHHHSCCCBCCTTTBSSCSCCH---HHHHHHHHHHHH
T ss_pred --------CccccccCCCCccChHHhccCCCCc---hhhHHHHHHHHH
Confidence 1122357899999999998877655 499999999998
No 227
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=99.97 E-value=7.7e-32 Score=303.30 Aligned_cols=175 Identities=24% Similarity=0.332 Sum_probs=148.0
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhh-------------hhhHHHHHHHHHhhcCCCCceeeEEE
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQK-------------EASRSFAAEFNALRNIRHRNLIKIIT 535 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~-------------~~~~~~~~E~~~l~~l~HpnIv~l~~ 535 (746)
..++|+..+.||+|+||.||+ ||||++..... ...+.+.+|++++++++|||||++++
T Consensus 34 i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~ 113 (504)
T 3q5i_A 34 IGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFD 113 (504)
T ss_dssp GGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEE
T ss_pred cccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEE
Confidence 457899999999999999996 89999864321 23467899999999999999999999
Q ss_pred EEecCCcccchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCC---cEEE
Q 041467 536 ICSSIDFEGFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDV---VTHV 607 (746)
Q Consensus 536 ~~~~~~~~~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~---~~ki 607 (746)
++.+....++|||||++|++. ...+++..+..++.||+.||+|||+. +|+||||||+||+++.++ .+||
T Consensus 114 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl 190 (504)
T 3q5i_A 114 VFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNIKI 190 (504)
T ss_dssp EEECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCSSEEE
T ss_pred EEEcCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCccEEE
Confidence 999999999999999999985 46799999999999999999999999 999999999999998765 6999
Q ss_pred ccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 608 GDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 608 ~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
+|||+|+..... ......+||+.|+|||++.+ .+ +.++||||+||++|
T Consensus 191 ~Dfg~a~~~~~~---------~~~~~~~gt~~y~aPE~~~~-~~---~~~~DiwslG~il~ 238 (504)
T 3q5i_A 191 VDFGLSSFFSKD---------YKLRDRLGTAYYIAPEVLKK-KY---NEKCDVWSCGVIMY 238 (504)
T ss_dssp CCCTTCEECCTT---------SCBCCCCSCTTTCCHHHHTT-CB---CTHHHHHHHHHHHH
T ss_pred EECCCCEEcCCC---------CccccccCCcCCCCHHHhcc-CC---CchHHHHHHHHHHH
Confidence 999999876322 12234679999999999874 34 44699999999998
No 228
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=99.97 E-value=1.1e-31 Score=289.25 Aligned_cols=182 Identities=26% Similarity=0.361 Sum_probs=153.7
Q ss_pred HhhhhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh--------hhhhHHHHHHHHHhhcC-CCCceeeEEEE
Q 041467 475 LSKATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ--------KEASRSFAAEFNALRNI-RHRNLIKIITI 536 (746)
Q Consensus 475 ~~~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--------~~~~~~~~~E~~~l~~l-~HpnIv~l~~~ 536 (746)
.....++|+..+.||+|+||.||+ ||||++.... ....+.+.+|+++++++ +||||++++++
T Consensus 89 ~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~ 168 (365)
T 2y7j_A 89 AKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDS 168 (365)
T ss_dssp HHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEE
T ss_pred hhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEE
Confidence 344557899999999999999997 8999875432 22345688999999999 79999999999
Q ss_pred EecCCcccchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccc
Q 041467 537 CSSIDFEGFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLG 611 (746)
Q Consensus 537 ~~~~~~~~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfG 611 (746)
+...+..++||||+++|++. ...+++..+..++.||+.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 169 ~~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~ikl~DfG 245 (365)
T 2y7j_A 169 YESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFG 245 (365)
T ss_dssp EEBSSEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCT
T ss_pred EeeCCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEEecC
Confidence 99999999999999999986 45789999999999999999999999 99999999999999999999999999
Q ss_pred ccccccCCCCCCCcccccccccccccccccccccccccc---cccCCCccceeeccceee
Q 041467 612 LAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARN---LENREKRHTVMSFPQRFA 668 (746)
Q Consensus 612 la~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~---~~~~~~~~DiwSlG~i~~ 668 (746)
++..+.... .....+||+.|+|||++.+.. ...++.++|||||||++|
T Consensus 246 ~~~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ 296 (365)
T 2y7j_A 246 FSCHLEPGE---------KLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILF 296 (365)
T ss_dssp TCEECCTTC---------CBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHH
T ss_pred cccccCCCc---------ccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHH
Confidence 998764321 123467999999999987542 112355699999999998
No 229
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=99.97 E-value=1.9e-32 Score=285.86 Aligned_cols=234 Identities=18% Similarity=0.201 Sum_probs=169.8
Q ss_pred HHhhhhcCCCCCC-eEeecCCeeEEE-----------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEec
Q 041467 474 ELSKATNNFSPAN-KIREGGFNIVYN-----------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSS 539 (746)
Q Consensus 474 ~~~~~~~~~~~~~-~ig~g~~g~v~~-----------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~ 539 (746)
++....++|...+ .||+|+||.||+ ||||++.... ....+.+.+|+++++.++||||+++++++ .
T Consensus 10 ~~~~~~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~ 88 (291)
T 1xbb_A 10 EVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-E 88 (291)
T ss_dssp -CBCCGGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-E
T ss_pred eeeecchhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-C
Confidence 3334456788877 999999999996 8899886543 23356799999999999999999999999 5
Q ss_pred CCcccchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccc
Q 041467 540 IDFEGFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614 (746)
Q Consensus 540 ~~~~~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~ 614 (746)
.+..++||||+++|++. ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 89 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~ 165 (291)
T 1xbb_A 89 AESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSK 165 (291)
T ss_dssp SSSEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCE
T ss_pred CCCcEEEEEeCCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCcce
Confidence 56788999999999886 45689999999999999999999999 99999999999999999999999999998
Q ss_pred cccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-cc-c------cch---hhc--
Q 041467 615 FLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ-N------KSI---LKS-- 681 (746)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~-~------~~i---~~~-- 681 (746)
........ ........||+.|+|||++.+..++.+ +|||||||++|.... .. . ..+ ...
T Consensus 166 ~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~ 237 (291)
T 1xbb_A 166 ALRADENY-----YKAQTHGKWPVKWYAPECINYYKFSSK---SDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGE 237 (291)
T ss_dssp ECCTTCSE-----EEC----CCCGGGCCHHHHHHCEEEHH---HHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTC
T ss_pred eeccCCCc-----ccccccCCCCceeeChHHhccCCCChh---hhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC
Confidence 76432211 111223456789999999988777655 999999999983221 11 0 000 000
Q ss_pred cccCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhccc
Q 041467 682 AGIKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLR 719 (746)
Q Consensus 682 ~~~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~ 719 (746)
.........+.+..++..|+...|. ||+..++...++.
T Consensus 238 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~ 276 (291)
T 1xbb_A 238 RMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRN 276 (291)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 0111123334455555555555565 7777766554443
No 230
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=99.97 E-value=1.6e-32 Score=289.92 Aligned_cols=187 Identities=22% Similarity=0.286 Sum_probs=155.3
Q ss_pred ccHHHHhhhhcCCCCCCeEeecCCeeEEE--------------EEeehhhhhh-hhhhHHHHHHHHHhhcC-CCCceeeE
Q 041467 470 ISHAELSKATNNFSPANKIREGGFNIVYN--------------VAMKVANLKQ-KEASRSFAAEFNALRNI-RHRNLIKI 533 (746)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~ig~g~~g~v~~--------------vavK~~~~~~-~~~~~~~~~E~~~l~~l-~HpnIv~l 533 (746)
+....+....++|+..+.||+|+||.||+ ||||++.... ....+.+.+|+++++++ +||||+++
T Consensus 17 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 96 (316)
T 2xir_A 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 96 (316)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred ccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeE
Confidence 34455556678999999999999999995 7899886543 33456789999999999 69999999
Q ss_pred EEEEecCC-cccchhhhccCCccc-----cc----------------CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcC
Q 041467 534 ITICSSID-FEGFDFKAISNGQLR-----LC----------------NLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGD 591 (746)
Q Consensus 534 ~~~~~~~~-~~~lv~e~~~~g~l~-----~~----------------~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrD 591 (746)
++++...+ ..++||||+++|+|. .. .+++.++..++.|++.|++|||+. +|+|||
T Consensus 97 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~d 173 (316)
T 2xir_A 97 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRD 173 (316)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSC
T ss_pred EEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---Cccccc
Confidence 99988755 589999999999885 11 178999999999999999999999 999999
Q ss_pred CCCCCeeeCCCCcEEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 592 LKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 592 lkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
|||+||+++.++.+||+|||+++....... ........||+.|+|||++.+..++.+ +||||+||++|
T Consensus 174 ikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~------~~~~~~~~~t~~y~aPE~~~~~~~~~~---~Di~slG~il~ 241 (316)
T 2xir_A 174 LAARNILLSEKNVVKICDFGLARDIYKDPD------YVRKGDARLPLKWMAPETIFDRVYTIQ---SDVWSFGVLLW 241 (316)
T ss_dssp CSGGGEEECGGGCEEECCCGGGSCTTTCTT------SEEETTEEECGGGCCHHHHHHCCCCHH---HHHHHHHHHHH
T ss_pred CccceEEECCCCCEEECCCccccccccCcc------ceeccCCCcceeecCchhhccccccch---hHHHHHHHHHH
Confidence 999999999999999999999987643221 112234668899999999988777654 99999999998
No 231
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.97 E-value=1.2e-29 Score=269.55 Aligned_cols=224 Identities=20% Similarity=0.262 Sum_probs=165.7
Q ss_pred ccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEc
Q 041467 18 TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRI 97 (746)
Q Consensus 18 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 97 (746)
+.|++|+|++|.+++..+..|+++++|++|+|++|++++..|..|+++++|++|+|++|.+. .+|..+.
T Consensus 52 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~---------- 120 (330)
T 1xku_A 52 PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP---------- 120 (330)
T ss_dssp TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC----------
T ss_pred CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc----------
Confidence 67999999999999877779999999999999999999888999999999999999999985 4554332
Q ss_pred cCCCCcCcccCCCCCCEEeccCCCccc-----ccCCCCCcEeeCccCcccc--cCCccccCCCCCCEEEccCCCCCCCCC
Q 041467 98 DCGGRIDSLGHLKSLLLLSLAFNQFLS-----LSNASSLEMIEFSRNQFSG--GVSVDFSRLKNLSWLNLGVNNLGSGTA 170 (746)
Q Consensus 98 ~~~~~~~~~~~l~~L~~L~Ls~N~l~~-----l~~l~~L~~L~Ls~N~l~~--~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 170 (746)
++|+.|++++|++.. +.++++|+.|++++|+++. ..+..|..+++|++|++++|.++..+
T Consensus 121 ------------~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~l~- 187 (330)
T 1xku_A 121 ------------KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIP- 187 (330)
T ss_dssp ------------TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSCC-
T ss_pred ------------ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccccCC-
Confidence 345555666666532 4566777777777777643 55666777777777777777776532
Q ss_pred CCccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCc
Q 041467 171 NELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPP 250 (746)
Q Consensus 171 ~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 250 (746)
..+. ++|++|++++|++++..|..+..++ +|+.|++++|++++..+..|..+++|++|+|++|++. .+|.
T Consensus 188 ------~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~-~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~ 257 (330)
T 1xku_A 188 ------QGLP--PSLTELHLDGNKITKVDAASLKGLN-NLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPG 257 (330)
T ss_dssp ------SSCC--TTCSEEECTTSCCCEECTGGGTTCT-TCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCT
T ss_pred ------cccc--ccCCEEECCCCcCCccCHHHhcCCC-CCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCCh
Confidence 2221 5777777777777766677777776 5777777777777666667777777777777777776 6666
Q ss_pred CCCCCCCCceeeccccccccccccc
Q 041467 251 LIGETPNLQLLNIGGNHLQGSILSS 275 (746)
Q Consensus 251 ~~~~l~~L~~L~Ls~N~l~~~~~~~ 275 (746)
.+..+++|++|++++|++++..+..
T Consensus 258 ~l~~l~~L~~L~l~~N~i~~~~~~~ 282 (330)
T 1xku_A 258 GLADHKYIQVVYLHNNNISAIGSND 282 (330)
T ss_dssp TTTTCSSCCEEECCSSCCCCCCTTS
T ss_pred hhccCCCcCEEECCCCcCCccChhh
Confidence 7777777777777777777544433
No 232
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=99.97 E-value=5.1e-32 Score=291.63 Aligned_cols=175 Identities=19% Similarity=0.295 Sum_probs=151.1
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhh-hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhh
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLK-QKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFK 548 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e 548 (746)
.++|+..+.||+|+||.||+ ||+|++... .....+.+.+|++++++++||||+++++++...+..++|||
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 111 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 111 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEEC
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEE
Confidence 45799999999999999997 899988654 23345679999999999999999999999999999999999
Q ss_pred hccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCC
Q 041467 549 AISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGT 623 (746)
Q Consensus 549 ~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~ 623 (746)
|+++|+|. ...+++..+..++.|++.|++|||+.+ +|+||||||+||+++.++.+||+|||+++.....
T Consensus 112 ~~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~---- 185 (360)
T 3eqc_A 112 HMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS---- 185 (360)
T ss_dssp CCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHH----
T ss_pred CCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECCCCcccccc----
Confidence 99999986 357899999999999999999999842 7999999999999999999999999999765321
Q ss_pred CcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 624 TAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 624 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
......||+.|+|||++.+..++.+ +||||+||++|
T Consensus 186 ------~~~~~~gt~~y~aPE~~~~~~~~~~---~Di~slG~il~ 221 (360)
T 3eqc_A 186 ------MANSFVGTRSYMSPERLQGTHYSVQ---SDIWSMGLSLV 221 (360)
T ss_dssp ------C----CCCCTTCCHHHHTTCCCSHH---HHHHHHHHHHH
T ss_pred ------cccCCCCCCCeECHHHHcCCCCCch---hhHHHHHHHHH
Confidence 1223679999999999988877554 99999999998
No 233
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=99.97 E-value=6e-32 Score=291.39 Aligned_cols=183 Identities=22% Similarity=0.232 Sum_probs=150.4
Q ss_pred HhhhhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCC---
Q 041467 475 LSKATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSID--- 541 (746)
Q Consensus 475 ~~~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~--- 541 (746)
+....++|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++||||+++++++....
T Consensus 22 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 101 (364)
T 3qyz_A 22 VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQ 101 (364)
T ss_dssp BCCCTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTT
T ss_pred eccccccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccc
Confidence 334557899999999999999997 8999986432 334567899999999999999999999997653
Q ss_pred --cccchhhhccCCccc----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccccccc
Q 041467 542 --FEGFDFKAISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615 (746)
Q Consensus 542 --~~~lv~e~~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~ 615 (746)
..++||||+.+ ++. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 102 ~~~~~iv~e~~~~-~L~~~l~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~ 177 (364)
T 3qyz_A 102 MKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARV 177 (364)
T ss_dssp CCCEEEEEECCSE-EHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEE
T ss_pred cceEEEEEcccCc-CHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcceEe
Confidence 57899999974 554 45799999999999999999999999 999999999999999999999999999987
Q ss_pred ccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 616 LYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 616 ~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
....... .......+||+.|+|||++.+... ++.++||||+||++|
T Consensus 178 ~~~~~~~-----~~~~~~~~gt~~y~aPE~~~~~~~--~~~~~DiwslG~il~ 223 (364)
T 3qyz_A 178 ADPDHDH-----TGFLTEYVATRWYRAPEIMLNSKG--YTKSIDIWSVGCILA 223 (364)
T ss_dssp CCGGGCB-----CCTTCCCCSCGGGCCHHHHHTBCS--CSTHHHHHHHHHHHH
T ss_pred cCCCCCc-----cccccccccccCCCCCHHhcCCCC--CCcchhHHHHHHHHH
Confidence 6432111 111234689999999999865542 234699999999998
No 234
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=99.97 E-value=3.5e-32 Score=289.34 Aligned_cols=177 Identities=22% Similarity=0.313 Sum_probs=147.3
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccch
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
..++|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 102 (331)
T 4aaa_A 23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLV 102 (331)
T ss_dssp CGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEE
Confidence 456899999999999999996 8999875432 23355688999999999999999999999999999999
Q ss_pred hhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCC
Q 041467 547 FKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 547 ~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~ 621 (746)
|||+.++.+. ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 103 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 178 (331)
T 4aaa_A 103 FEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG- 178 (331)
T ss_dssp EECCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC--------
T ss_pred EecCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeecCCc-
Confidence 9999988775 45689999999999999999999999 99999999999999999999999999998653321
Q ss_pred CCCccccccccccccccccccccccccc-ccccCCCccceeeccceee
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAAR-NLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~~~~~DiwSlG~i~~ 668 (746)
.......||+.|+|||++.+. .+ +.++||||+||++|
T Consensus 179 -------~~~~~~~~t~~y~aPE~~~~~~~~---~~~~Di~slG~il~ 216 (331)
T 4aaa_A 179 -------EVYDDEVATRWYRAPELLVGDVKY---GKAVDVWAIGCLVT 216 (331)
T ss_dssp ------------CCCCCTTCCHHHHTTCTTC---CTHHHHHHHHHHHH
T ss_pred -------cccCCCcCCccccCcccccCCCCc---chHHHHHHHHHHHH
Confidence 112235789999999999875 34 34699999999998
No 235
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.97 E-value=3.1e-32 Score=312.40 Aligned_cols=221 Identities=17% Similarity=0.220 Sum_probs=166.7
Q ss_pred eEeecCCeeEEE-----------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhccCCc
Q 041467 487 KIREGGFNIVYN-----------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISNGQ 554 (746)
Q Consensus 487 ~ig~g~~g~v~~-----------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~~~g~ 554 (746)
.||+|+||.||+ ||||+++... ....+.+.+|+++|++++|||||+++++|.. +..++||||+++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 799999999995 8999987542 3356789999999999999999999999976 56899999999999
Q ss_pred cc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCcccc
Q 041467 555 LR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETA 628 (746)
Q Consensus 555 l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~ 628 (746)
|. ...+++.++..++.||+.||+|||+. +|+||||||+|||++.++.+||+|||+|+.+...... .
T Consensus 422 L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~-----~ 493 (613)
T 2ozo_A 422 LHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSY-----Y 493 (613)
T ss_dssp HHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-----------
T ss_pred HHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCce-----e
Confidence 85 34589999999999999999999999 9999999999999999999999999999876432211 1
Q ss_pred cccccccccccccccccccccccccCCCccceeeccceeecccc--cc------ccchhh---c--cccCCCccHHHHHH
Q 041467 629 SSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK--KQ------NKSILK---S--AGIKGKKTVSFFLS 695 (746)
Q Consensus 629 ~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~--~~------~~~i~~---~--~~~~~~~~~~~~~~ 695 (746)
.......+|+.|+|||++.+..++.+ +|||||||++|.... .. ..++.. . .......+.+.+..
T Consensus 494 ~~~~~~~~~~~y~APE~~~~~~~~~~---sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~l~~ 570 (613)
T 2ozo_A 494 TARSAGKWPLKWYAPECINFRKFSSR---SDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPPELYA 570 (613)
T ss_dssp --------CCTTSCHHHHHHCCCCHH---HHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHTTCCCCCCTTCCHHHHH
T ss_pred eeccCCCCccceeCHhhhcCCCCCcH---HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCCcCCHHHHH
Confidence 11122346789999999988777655 999999999983221 11 011111 1 11122345567777
Q ss_pred hhCCCCCCCCC-CCCccchhhhccc
Q 041467 696 LLSPSCSVFPL-TPSSNSFTLLGLR 719 (746)
Q Consensus 696 ~~~~~~~~~p~-~p~~~~~~~~~~~ 719 (746)
++..|+...|. ||++.++...++.
T Consensus 571 li~~cl~~dP~~RPs~~~l~~~L~~ 595 (613)
T 2ozo_A 571 LMSDCWIYKWEDRPDFLTVEQRMRA 595 (613)
T ss_dssp HHHHTTCSSTTTSCCHHHHHHHHHH
T ss_pred HHHHHcCCChhHCcCHHHHHHHHHH
Confidence 78888888887 9998876655443
No 236
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=99.97 E-value=1.8e-32 Score=284.10 Aligned_cols=176 Identities=19% Similarity=0.292 Sum_probs=147.5
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEec--CCcccc
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSS--IDFEGF 545 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~--~~~~~l 545 (746)
.++|+..+.||+|+||.||+ ||+|++.... ....+.+.+|++++++++||||+++++++.+ ....++
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 56899999999999999997 8999886432 3345679999999999999999999998854 557899
Q ss_pred hhhhccCCccc---------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCC-----eEEcCCCCCCeeeCCCCcEEEcccc
Q 041467 546 DFKAISNGQLR---------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPS-----IVHGDLKPSNILLDQDVVTHVGDLG 611 (746)
Q Consensus 546 v~e~~~~g~l~---------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~-----ivHrDlkp~NILl~~~~~~ki~DfG 611 (746)
||||+++|+|. ...+++.++..++.|++.|++|||+. + |+||||||+||+++.++.+||+|||
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg 161 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLGDFG 161 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence 99999999886 23489999999999999999999999 7 9999999999999999999999999
Q ss_pred ccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 612 LAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 612 la~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
+++...... .......||+.|+|||++.+..++. ++||||+||++|
T Consensus 162 ~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~---~~Di~slG~il~ 207 (279)
T 2w5a_A 162 LARILNHDT--------SFAKTFVGTPYYMSPEQMNRMSYNE---KSDIWSLGCLLY 207 (279)
T ss_dssp HHHHC---C--------HHHHHHHSCCTTCCHHHHHCC-CCH---HHHHHHHHHHHH
T ss_pred hheeecccc--------ccccccCCCccccChHHhccCCCCc---hhhHHHHHHHHH
Confidence 998753211 1122357899999999998877655 499999999998
No 237
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=99.97 E-value=4.9e-32 Score=287.03 Aligned_cols=178 Identities=21% Similarity=0.304 Sum_probs=144.7
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh--------hhhhHHHHHHHHHhhcCCCCceeeEEEEEecC
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ--------KEASRSFAAEFNALRNIRHRNLIKIITICSSI 540 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--------~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~ 540 (746)
..++|+..+.||+|+||.||+ ||||++.... ......+.+|++++++++||||+++++++...
T Consensus 8 l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~ 87 (322)
T 2ycf_A 8 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 87 (322)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESS
T ss_pred hhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCC
Confidence 346799999999999999996 8999886432 12234588999999999999999999998765
Q ss_pred CcccchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCc---EEEccccc
Q 041467 541 DFEGFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVV---THVGDLGL 612 (746)
Q Consensus 541 ~~~~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~---~ki~DfGl 612 (746)
. .++||||+++|++. ...+++.++..++.||+.||+|||+. +|+||||||+||+++.++. +||+|||+
T Consensus 88 ~-~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~ 163 (322)
T 2ycf_A 88 D-YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGH 163 (322)
T ss_dssp S-EEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEECCCTT
T ss_pred c-eEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEccCcc
Confidence 5 79999999999885 45789999999999999999999999 9999999999999986654 99999999
Q ss_pred cccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 613 AKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 613 a~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
++..... .......||+.|+|||++.+.....++.++|||||||++|
T Consensus 164 ~~~~~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~ 210 (322)
T 2ycf_A 164 SKILGET---------SLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 210 (322)
T ss_dssp CEECCCC---------HHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHH
T ss_pred ceecccc---------cccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHH
Confidence 9875321 1122467999999999986432233455699999999998
No 238
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=99.97 E-value=6e-32 Score=282.46 Aligned_cols=223 Identities=19% Similarity=0.264 Sum_probs=165.2
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhc
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAI 550 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~ 550 (746)
+.|.....||+|+||.||+ ||||++........+.+.+|+.+++.++|||||++++++...+..++||||+
T Consensus 22 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 101 (295)
T 2clq_A 22 DENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQV 101 (295)
T ss_dssp CTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred cCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeC
Confidence 3455667999999999997 8999987655555678999999999999999999999999999999999999
Q ss_pred cCCccc--------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCC-CCcEEEccccccccccCCCC
Q 041467 551 SNGQLR--------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQ-DVVTHVGDLGLAKFLYGYEP 621 (746)
Q Consensus 551 ~~g~l~--------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~-~~~~ki~DfGla~~~~~~~~ 621 (746)
++|++. ...+++..+..++.|++.|++|||+. +|+||||||+||+++. ++.+||+|||+++.......
T Consensus 102 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~ 178 (295)
T 2clq_A 102 PGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP 178 (295)
T ss_dssp SEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC---
T ss_pred CCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccCCCCC
Confidence 999885 12457889999999999999999999 9999999999999987 89999999999987633211
Q ss_pred CCCcccccccccccccccccccccccccccccCCCccceeeccceeecccccc---------ccch-----hhccccCCC
Q 041467 622 GTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEKKQ---------NKSI-----LKSAGIKGK 687 (746)
Q Consensus 622 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~~~---------~~~i-----~~~~~~~~~ 687 (746)
......||+.|+|||++.+... .++.++|||||||++|...... ...+ ....+....
T Consensus 179 --------~~~~~~~~~~y~aPE~~~~~~~-~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 249 (295)
T 2clq_A 179 --------CTETFTGTLQYMAPEIIDKGPR-GYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPE 249 (295)
T ss_dssp ----------CCCCCCGGGCCHHHHHHGGG-GCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCCCCCCT
T ss_pred --------cccccCCCccccChhhhcCCCC-CCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhccccccccccc
Confidence 1223678999999999976531 1234599999999998211110 0000 111112223
Q ss_pred ccHHHHHHhhCCCCCCCCC-CCCccchh
Q 041467 688 KTVSFFLSLLSPSCSVFPL-TPSSNSFT 714 (746)
Q Consensus 688 ~~~~~~~~~~~~~~~~~p~-~p~~~~~~ 714 (746)
...+.+..++..|+...|+ ||+..++.
T Consensus 250 ~~~~~~~~li~~~l~~dp~~Rps~~~ll 277 (295)
T 2clq_A 250 SMSAEAKAFILKCFEPDPDKRACANDLL 277 (295)
T ss_dssp TSCHHHHHHHHHTTCSSTTTSCCHHHHH
T ss_pred cCCHHHHHHHHHHccCChhhCCCHHHHh
Confidence 3445555566666666666 77776543
No 239
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=99.97 E-value=3.5e-32 Score=288.68 Aligned_cols=179 Identities=22% Similarity=0.312 Sum_probs=151.4
Q ss_pred hcCCCCCCeEeecCCeeEEE-------------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCC--cc
Q 041467 479 TNNFSPANKIREGGFNIVYN-------------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSID--FE 543 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~-------------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~--~~ 543 (746)
.++|+..+.||+|+||.||+ ||||++........+.+.+|++++++++||||+++++++...+ ..
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 119 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 119 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence 45688999999999999985 7999987655556678999999999999999999999987754 68
Q ss_pred cchhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccccccccc
Q 041467 544 GFDFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617 (746)
Q Consensus 544 ~lv~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~ 617 (746)
++||||+++|+|. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 120 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~ 196 (326)
T 2w1i_A 120 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLP 196 (326)
T ss_dssp EEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcchhhcc
Confidence 8999999999986 24589999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 618 GYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
..... ........||..|+|||++.+..++.+ +||||+||++|
T Consensus 197 ~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~il~ 239 (326)
T 2w1i_A 197 QDKEY-----YKVKEPGESPIFWYAPESLTESKFSVA---SDVWSFGVVLY 239 (326)
T ss_dssp SSCSE-----EECSSCCSCCGGGCCHHHHHHCEEEHH---HHHHHHHHHHH
T ss_pred ccccc-----cccccCCCCceeEECchhhcCCCCCch---hhHHHHHHHHH
Confidence 32211 111223457888999999988777655 99999999998
No 240
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=4.2e-32 Score=282.58 Aligned_cols=229 Identities=18% Similarity=0.216 Sum_probs=171.0
Q ss_pred hcCCCCCC-eEeecCCeeEEE-----------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccc
Q 041467 479 TNNFSPAN-KIREGGFNIVYN-----------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 479 ~~~~~~~~-~ig~g~~g~v~~-----------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~l 545 (746)
.++|...+ .||+|+||.||+ ||||++.... ....+.+.+|++++++++||||+++++++ ..+..++
T Consensus 8 ~~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~l 86 (287)
T 1u59_A 8 RDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALML 86 (287)
T ss_dssp GGGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEE
T ss_pred HHHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEE
Confidence 34566665 999999999996 8999886532 34566799999999999999999999999 4567899
Q ss_pred hhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCC
Q 041467 546 DFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGY 619 (746)
Q Consensus 546 v~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~ 619 (746)
||||+++|+|. ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 87 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~ 163 (287)
T 1u59_A 87 VMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGAD 163 (287)
T ss_dssp EEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEECTTC
T ss_pred EEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceeeeccC
Confidence 99999999885 34589999999999999999999999 9999999999999999999999999999876432
Q ss_pred CCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-cc-c------cc----hhh-ccccCC
Q 041467 620 EPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ-N------KS----ILK-SAGIKG 686 (746)
Q Consensus 620 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~-~------~~----i~~-~~~~~~ 686 (746)
... ........||+.|+|||++.+..++.+ +||||+||++|.... .. . .. +.. ..+...
T Consensus 164 ~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~~~~~~~~ 235 (287)
T 1u59_A 164 DSY-----YTARSAGKWPLKWYAPECINFRKFSSR---SDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECP 235 (287)
T ss_dssp SCE-----ECCCCSSCCCGGGCCHHHHHHCEECHH---HHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCCCCC
T ss_pred cce-----eeccccccccccccCHHHhccCCCCch---hhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhcCCcCCCC
Confidence 211 111223457899999999987776554 999999999983221 11 0 00 100 011112
Q ss_pred CccHHHHHHhhCCCCCCCCC-CCCccchhhhccc
Q 041467 687 KKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLR 719 (746)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~ 719 (746)
....+.+..++..|+...|. ||+..++...+..
T Consensus 236 ~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~ 269 (287)
T 1u59_A 236 PECPPELYALMSDCWIYKWEDRPDFLTVEQRMRA 269 (287)
T ss_dssp TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHH
Confidence 33445555666666666666 7887766654443
No 241
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=99.97 E-value=1.5e-32 Score=285.23 Aligned_cols=171 Identities=20% Similarity=0.335 Sum_probs=146.9
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEec----------
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSS---------- 539 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~---------- 539 (746)
..+|+..+.||+|+||.||+ ||||++.... +.+.+|++++++++||||+++++++..
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 85 (284)
T 2a19_B 10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSK 85 (284)
T ss_dssp HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC------
T ss_pred ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccc
Confidence 45788999999999999997 8999886432 347789999999999999999998865
Q ss_pred ------CCcccchhhhccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEE
Q 041467 540 ------IDFEGFDFKAISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTH 606 (746)
Q Consensus 540 ------~~~~~lv~e~~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~k 606 (746)
....++||||+++|+|. ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+|
T Consensus 86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~k 162 (284)
T 2a19_B 86 NSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVK 162 (284)
T ss_dssp ---CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEE
T ss_pred cccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcCCCCEE
Confidence 33578999999999986 24689999999999999999999999 999999999999999999999
Q ss_pred EccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 607 VGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 607 i~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
|+|||+++...... ......||+.|+|||++.+..++. ++||||+||++|
T Consensus 163 l~Dfg~~~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~---~~Di~slG~il~ 212 (284)
T 2a19_B 163 IGDFGLVTSLKNDG---------KRTRSKGTLRYMSPEQISSQDYGK---EVDLYALGLILA 212 (284)
T ss_dssp ECCCTTCEESSCCS---------CCCCCCSCCTTSCHHHHHCSCCCT---HHHHHHHHHHHH
T ss_pred ECcchhheeccccc---------cccccCCcccccChhhhccCCCcc---hhhhHHHHHHHH
Confidence 99999998764321 122356899999999998877654 599999999998
No 242
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=99.97 E-value=1.6e-31 Score=278.53 Aligned_cols=172 Identities=21% Similarity=0.333 Sum_probs=145.3
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEec----CCccc
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSS----IDFEG 544 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~----~~~~~ 544 (746)
..|...+.||+|+||.||+ ||+|++.... ....+.+.+|++++++++||||+++++++.. ....+
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 105 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIV 105 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEE
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEE
Confidence 3477788999999999997 8899876442 3445679999999999999999999999876 34588
Q ss_pred chhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEEcCCCCCCeeeC-CCCcEEEccccccccc
Q 041467 545 FDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPS--IVHGDLKPSNILLD-QDVVTHVGDLGLAKFL 616 (746)
Q Consensus 545 lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~--ivHrDlkp~NILl~-~~~~~ki~DfGla~~~ 616 (746)
+||||+++|+|. ...+++..+..++.|++.|++|||+. + |+||||||+||+++ .++.+||+|||++...
T Consensus 106 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~ 182 (290)
T 1t4h_A 106 LVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLK 182 (290)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGC
T ss_pred EEEEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeCCCcccc
Confidence 999999999986 36789999999999999999999999 7 99999999999997 7899999999999754
Q ss_pred cCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 617 YGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
... ......||+.|+|||++.+. + +.++||||+||++|
T Consensus 183 ~~~----------~~~~~~~t~~y~aPE~~~~~-~---~~~~Di~slG~~l~ 220 (290)
T 1t4h_A 183 RAS----------FAKAVIGTPEFMAPEMYEEK-Y---DESVDVYAFGMCML 220 (290)
T ss_dssp CTT----------SBEESCSSCCCCCGGGGGTC-C---CTHHHHHHHHHHHH
T ss_pred ccc----------ccccccCCcCcCCHHHHhcc-C---CCcchHHHHHHHHH
Confidence 221 12236799999999988643 4 44699999999998
No 243
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=99.97 E-value=2.8e-32 Score=282.58 Aligned_cols=230 Identities=17% Similarity=0.290 Sum_probs=171.1
Q ss_pred HhhhhcCCCCCCeEeecCCeeEEE--------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccch
Q 041467 475 LSKATNNFSPANKIREGGFNIVYN--------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 475 ~~~~~~~~~~~~~ig~g~~g~v~~--------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
+....++|+..+.||+|+||.||+ ||||++.... ...+.+.+|++++++++||||+++++++.. +..++|
T Consensus 8 ~~v~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v 85 (279)
T 1qpc_A 8 WEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYII 85 (279)
T ss_dssp TBCCGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEE
T ss_pred cccCHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcC-CCcEEE
Confidence 334457889999999999999996 8999886432 235679999999999999999999999864 568899
Q ss_pred hhhccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCC
Q 041467 547 FKAISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGY 619 (746)
Q Consensus 547 ~e~~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~ 619 (746)
|||+++|+|. ...+++.++..++.|++.|++|||+. +|+||||||+||++++++.+||+|||+++.....
T Consensus 86 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 162 (279)
T 1qpc_A 86 TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDN 162 (279)
T ss_dssp EECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSSS
T ss_pred EecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccccCc
Confidence 9999999986 12689999999999999999999999 9999999999999999999999999999876432
Q ss_pred CCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-cc-------ccchh----hc-cccCC
Q 041467 620 EPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ-------NKSIL----KS-AGIKG 686 (746)
Q Consensus 620 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~-------~~~i~----~~-~~~~~ 686 (746)
.. .......||..|+|||++.+..++.+ +||||+||++|.... .. ...+. .. .....
T Consensus 163 ~~-------~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~ 232 (279)
T 1qpc_A 163 EY-------TAREGAKFPIKWTAPEAINYGTFTIK---SDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRP 232 (279)
T ss_dssp CE-------ECCTTCCCCTTTSCHHHHHHCEECHH---HHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCC
T ss_pred cc-------ccccCCCCccCccChhhhccCCCCch---hhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhcccCCCCc
Confidence 11 11223557889999999987776554 999999999983221 11 00111 00 11111
Q ss_pred CccHHHHHHhhCCCCCCCCC-CCCccchhhhccc
Q 041467 687 KKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLR 719 (746)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~ 719 (746)
....+.+..++..|....|. ||+..++...++.
T Consensus 233 ~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~ 266 (279)
T 1qpc_A 233 DNCPEELYQLMRLCWKERPEDRPTFDYLRSVLED 266 (279)
T ss_dssp TTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHhccChhhCCCHHHHHHHHHH
Confidence 23334444555555555555 7787766654443
No 244
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=99.97 E-value=7.6e-32 Score=291.27 Aligned_cols=173 Identities=19% Similarity=0.284 Sum_probs=144.6
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhh--hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcc---
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLK--QKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFE--- 543 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~--~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~--- 543 (746)
..++|...+.||+|+||.||+ ||||++... .....+.+.+|+++++.++||||+++++++...+..
T Consensus 40 l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 119 (371)
T 4exu_A 40 LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNF 119 (371)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTC
T ss_pred ccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccc
Confidence 346889999999999999997 899998643 233456789999999999999999999999887654
Q ss_pred ---cchhhhccCCccc---ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccccccccc
Q 041467 544 ---GFDFKAISNGQLR---LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617 (746)
Q Consensus 544 ---~lv~e~~~~g~l~---~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~ 617 (746)
++||||+. |++. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+|+...
T Consensus 120 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~ 195 (371)
T 4exu_A 120 YDFYLVMPFMQ-TDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHAD 195 (371)
T ss_dssp CCCEEEEECCC-EEHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTCC----
T ss_pred eeEEEEEcccc-ccHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCcccccc
Confidence 89999997 4554 45689999999999999999999999 99999999999999999999999999998642
Q ss_pred CCCCCCCcccccccccccccccccccccccc-cccccCCCccceeeccceee
Q 041467 618 GYEPGTTAETASSSIGINGTVGYVAPVIIAA-RNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~~~~~DiwSlG~i~~ 668 (746)
. .....+||+.|+|||++.+ ..++ .++||||+||++|
T Consensus 196 ~-----------~~~~~~~t~~y~aPE~~~~~~~~~---~~~DiwslG~il~ 233 (371)
T 4exu_A 196 A-----------EMTGYVVTRWYRAPEVILSWMHYN---QTVDIWSVGCIMA 233 (371)
T ss_dssp ---------------CTTCCCTTSCHHHHSCCSCCC---TTHHHHHHHHHHH
T ss_pred c-----------CcCCcccCccccCHHHhcCCCCCC---cHHhHHHHHHHHH
Confidence 2 1234678999999999987 4444 4599999999998
No 245
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=99.97 E-value=2.8e-32 Score=289.49 Aligned_cols=227 Identities=22% Similarity=0.261 Sum_probs=166.6
Q ss_pred hcCCCCCCeEeecCCeeEEE-----------EEeehhhhh-hhhhhHHHHHHHHHhhcC-CCCceeeEEEEEecCCcccc
Q 041467 479 TNNFSPANKIREGGFNIVYN-----------VAMKVANLK-QKEASRSFAAEFNALRNI-RHRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~-----------vavK~~~~~-~~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~~~~~~l 545 (746)
.++|+..+.||+|+||.||+ ||||++... .....+.+.+|+++++++ +||||+++++++.+.+..++
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 103 (327)
T 1fvr_A 24 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 103 (327)
T ss_dssp GGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEE
T ss_pred HHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEE
Confidence 36788899999999999996 488887532 233456789999999999 89999999999999999999
Q ss_pred hhhhccCCccc-----c----------------cCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCc
Q 041467 546 DFKAISNGQLR-----L----------------CNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVV 604 (746)
Q Consensus 546 v~e~~~~g~l~-----~----------------~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~ 604 (746)
||||+++|+|. . ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~ 180 (327)
T 1fvr_A 104 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYV 180 (327)
T ss_dssp EECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGC
T ss_pred EEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCCCe
Confidence 99999999985 1 2589999999999999999999999 9999999999999999999
Q ss_pred EEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-cc-c------c
Q 041467 605 THVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ-N------K 676 (746)
Q Consensus 605 ~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~-~------~ 676 (746)
+||+|||+++..... .......+|+.|+|||++.+..++.+ +||||+||++|.... .. . .
T Consensus 181 ~kL~Dfg~~~~~~~~---------~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~il~ellt~g~~pf~~~~~~ 248 (327)
T 1fvr_A 181 AKIADFGLSRGQEVY---------VKKTMGRLPVRWMAIESLNYSVYTTN---SDVWSYGVLLWEIVSLGGTPYCGMTCA 248 (327)
T ss_dssp EEECCTTCEESSCEE---------CCC----CCTTTCCHHHHHHCEECHH---HHHHHHHHHHHHHHTTSCCTTTTCCHH
T ss_pred EEEcccCcCcccccc---------ccccCCCCCccccChhhhccccCCch---hcchHHHHHHHHHHcCCCCCCCCCcHH
Confidence 999999999753211 11223457889999999987776554 999999999983221 11 0 0
Q ss_pred chhhc-----cccCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhcccC
Q 041467 677 SILKS-----AGIKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLRL 720 (746)
Q Consensus 677 ~i~~~-----~~~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~ 720 (746)
.+... .........+.+..++..|+...|. ||+..++...+.++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~ 298 (327)
T 1fvr_A 249 ELYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRM 298 (327)
T ss_dssp HHHHHGGGTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHhhcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 11110 1111123334444555555555555 78887666555443
No 246
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=99.97 E-value=7.6e-32 Score=290.48 Aligned_cols=182 Identities=19% Similarity=0.194 Sum_probs=143.6
Q ss_pred HHHHhhhhcCCCCCCeEeecCCeeEEE--------EEeehhhhhh-----------hhhhHHHHHHHHHhhcCCCCceee
Q 041467 472 HAELSKATNNFSPANKIREGGFNIVYN--------VAMKVANLKQ-----------KEASRSFAAEFNALRNIRHRNLIK 532 (746)
Q Consensus 472 ~~~~~~~~~~~~~~~~ig~g~~g~v~~--------vavK~~~~~~-----------~~~~~~~~~E~~~l~~l~HpnIv~ 532 (746)
.+++....++|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++||||++
T Consensus 14 ~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~ 93 (362)
T 3pg1_A 14 IAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILG 93 (362)
T ss_dssp HHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCC
T ss_pred HHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccc
Confidence 456777889999999999999999997 8999875321 222467999999999999999999
Q ss_pred EEEEEecCC-----cccchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCC
Q 041467 533 IITICSSID-----FEGFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQD 602 (746)
Q Consensus 533 l~~~~~~~~-----~~~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~ 602 (746)
+++++...+ ..++||||+.++.+. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.+
T Consensus 94 ~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~ 170 (362)
T 3pg1_A 94 LRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNILLADN 170 (362)
T ss_dssp CSEEEEECCTTTCCEEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTT
T ss_pred eeeeEEeccCCCcceEEEEEccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHEEEcCC
Confidence 999985533 568999999843332 33689999999999999999999999 99999999999999999
Q ss_pred CcEEEccccccccccCCCCCCCcccccccccccccccccccccccc-cccccCCCccceeeccceee
Q 041467 603 VVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAA-RNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 603 ~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~~~~~DiwSlG~i~~ 668 (746)
+.+||+|||+++..... .......||+.|+|||++.+ ..+ +.++||||+||++|
T Consensus 171 ~~~kl~Dfg~~~~~~~~---------~~~~~~~~t~~y~aPE~~~~~~~~---~~~~DiwslG~il~ 225 (362)
T 3pg1_A 171 NDITICDFNLAREDTAD---------ANKTHYVTHRWYRAPELVMQFKGF---TKLVDMWSAGCVMA 225 (362)
T ss_dssp CCEEECCTTC------------------------CGGGCCHHHHTTCTTC---CTHHHHHHHHHHHH
T ss_pred CCEEEEecCcccccccc---------cccceecccceecCcHHhcCCCCC---CcHhHHHhHHHHHH
Confidence 99999999999754221 12234678999999999987 444 44699999999998
No 247
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=99.97 E-value=3.5e-32 Score=312.79 Aligned_cols=221 Identities=19% Similarity=0.213 Sum_probs=163.8
Q ss_pred CeEeecCCeeEEE-----------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhhhccC
Q 041467 486 NKIREGGFNIVYN-----------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFKAISN 552 (746)
Q Consensus 486 ~~ig~g~~g~v~~-----------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e~~~~ 552 (746)
+.||+|+||.||+ ||||+++... ....+.+.+|++++++++|||||+++++|.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 4799999999995 8999987543 2345789999999999999999999999965 557899999999
Q ss_pred Cccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCccc
Q 041467 553 GQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAET 627 (746)
Q Consensus 553 g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~ 627 (746)
|+|. ...+++.++..++.||+.||+|||++ +|+||||||+|||++.++.+||+|||+|+.+......
T Consensus 454 g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~----- 525 (635)
T 4fl3_A 454 GPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY----- 525 (635)
T ss_dssp EEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC---------
T ss_pred CCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccc-----
Confidence 9986 45689999999999999999999999 9999999999999999999999999999876433221
Q ss_pred ccccccccccccccccccccccccccCCCccceeeccceeecccc-cc-c------cch---hhc--cccCCCccHHHHH
Q 041467 628 ASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ-N------KSI---LKS--AGIKGKKTVSFFL 694 (746)
Q Consensus 628 ~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~-~------~~i---~~~--~~~~~~~~~~~~~ 694 (746)
........||+.|+|||++.+..++.+ +|||||||++|.... .. . ..+ +.. .......+.+.+.
T Consensus 526 ~~~~~~~~~t~~y~APE~~~~~~~~~~---sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~~~l~ 602 (635)
T 4fl3_A 526 YKAQTHGKWPVKWYAPECINYYKFSSK---SDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCPREMY 602 (635)
T ss_dssp ---------CGGGSCHHHHHHCCCCHH---HHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCCHHHH
T ss_pred cccccCCCCceeeeChhhhcCCCCCcH---HHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCCHHHH
Confidence 111223457889999999988777655 999999999983221 11 0 011 111 1111233445566
Q ss_pred HhhCCCCCCCCC-CCCccchhhhcc
Q 041467 695 SLLSPSCSVFPL-TPSSNSFTLLGL 718 (746)
Q Consensus 695 ~~~~~~~~~~p~-~p~~~~~~~~~~ 718 (746)
.++..|+...|+ ||++.++...++
T Consensus 603 ~li~~cl~~dP~~RPs~~~l~~~L~ 627 (635)
T 4fl3_A 603 DLMNLCWTYDVENRPGFAAVELRLR 627 (635)
T ss_dssp HHHHHHTCSSTTTSCCHHHHHHHHH
T ss_pred HHHHHHcCCCHhHCcCHHHHHHHHH
Confidence 666666666676 888876654443
No 248
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=99.97 E-value=6.8e-32 Score=286.47 Aligned_cols=181 Identities=18% Similarity=0.228 Sum_probs=150.0
Q ss_pred HHHhhhhcCCCCC-CeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCC-CCceeeEEEEEec
Q 041467 473 AELSKATNNFSPA-NKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIR-HRNLIKIITICSS 539 (746)
Q Consensus 473 ~~~~~~~~~~~~~-~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~-HpnIv~l~~~~~~ 539 (746)
.......+.|... +.||+|+||.||+ ||||++.... ......+.+|+.++++++ ||||+++++++..
T Consensus 21 ~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~ 100 (327)
T 3lm5_A 21 QSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYEN 100 (327)
T ss_dssp BCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEEC
T ss_pred HHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEe
Confidence 3344455667776 8999999999997 8999886543 233567899999999995 6999999999999
Q ss_pred CCcccchhhhccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCC---CCcEEEcc
Q 041467 540 IDFEGFDFKAISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQ---DVVTHVGD 609 (746)
Q Consensus 540 ~~~~~lv~e~~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~---~~~~ki~D 609 (746)
.+..++||||+++|++. ...+++.++..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|
T Consensus 101 ~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~~kL~D 177 (327)
T 3lm5_A 101 TSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKIVD 177 (327)
T ss_dssp SSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCCEEECC
T ss_pred CCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCcEEEee
Confidence 99999999999999885 25689999999999999999999999 9999999999999987 78999999
Q ss_pred ccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 610 LGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 610 fGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
||+++...... ......||+.|+|||++.+..++. ++||||+||++|
T Consensus 178 fg~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~~~---~~DiwslG~il~ 224 (327)
T 3lm5_A 178 FGMSRKIGHAC---------ELREIMGTPEYLAPEILNYDPITT---ATDMWNIGIIAY 224 (327)
T ss_dssp GGGCEEC------------------CCCGGGCCHHHHTTCCCCT---HHHHHHHHHHHH
T ss_pred CccccccCCcc---------ccccccCCcCccCCeeecCCCCCc---hhhHHHHHHHHH
Confidence 99998763221 122367999999999998877655 499999999998
No 249
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=99.97 E-value=3.6e-32 Score=284.19 Aligned_cols=181 Identities=21% Similarity=0.281 Sum_probs=144.7
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEE-ecCCcccchh
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITIC-SSIDFEGFDF 547 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~-~~~~~~~lv~ 547 (746)
..++|+..+.||+|+||.||+ ||||++.... ....+.+|+++++.++|++++..++++ ...+..++||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc--cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEE
Confidence 457899999999999999997 8999865332 223588999999999988877766665 5566789999
Q ss_pred hhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeee---CCCCcEEEccccccccccC
Q 041467 548 KAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL---DQDVVTHVGDLGLAKFLYG 618 (746)
Q Consensus 548 e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl---~~~~~~ki~DfGla~~~~~ 618 (746)
||+ +|++. ...+++.++..++.|++.|++|||++ +|+||||||+||++ +.++.+||+|||+|+....
T Consensus 85 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~ 160 (296)
T 4hgt_A 85 ELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160 (296)
T ss_dssp ECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred Ecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCccceeccC
Confidence 999 88875 45689999999999999999999999 99999999999999 7889999999999987654
Q ss_pred CCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 619 YEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 619 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
...... ..........||+.|+|||++.+..++.+ +||||+||++|
T Consensus 161 ~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~---~Di~slG~il~ 206 (296)
T 4hgt_A 161 ARTHQH-IPYRENKNLTGTARYASINTHLGIEQSRR---DDLESLGYVLM 206 (296)
T ss_dssp TTTCCB-CCCCCSCCCCSCGGGCCHHHHTTCCCCHH---HHHHHHHHHHH
T ss_pred cccCcc-CCCCcccccCCCccccchHHhcCCCCCch---hHHHHHHHHHH
Confidence 332111 01112334689999999999998877554 99999999998
No 250
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=99.97 E-value=3.2e-32 Score=283.93 Aligned_cols=231 Identities=21% Similarity=0.247 Sum_probs=163.9
Q ss_pred hcCCCCCCeEeecCCeeEEE------------EEeehhhhh---hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcc
Q 041467 479 TNNFSPANKIREGGFNIVYN------------VAMKVANLK---QKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFE 543 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~------------vavK~~~~~---~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~ 543 (746)
.++|+..+.||+|+||.||+ ||||++... .....+.+.+|++++++++||||+++++++.... .
T Consensus 17 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~ 95 (291)
T 1u46_A 17 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-M 95 (291)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-C
T ss_pred hhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-c
Confidence 45788999999999999996 689988654 2344677999999999999999999999998755 8
Q ss_pred cchhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccccccccc
Q 041467 544 GFDFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617 (746)
Q Consensus 544 ~lv~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~ 617 (746)
++||||+++|++. ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 96 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~ 172 (291)
T 1u46_A 96 KMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRALP 172 (291)
T ss_dssp EEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred eeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEcccccccccc
Confidence 8999999999886 35689999999999999999999999 99999999999999999999999999998764
Q ss_pred CCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-ccc-----------cchhhc--cc
Q 041467 618 GYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQN-----------KSILKS--AG 683 (746)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~~-----------~~i~~~--~~ 683 (746)
..... ........||..|+|||++.+..++.+ +||||+||++|.... ... ..+... ..
T Consensus 173 ~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~ 244 (291)
T 1u46_A 173 QNDDH-----YVMQEHRKVPFAWCAPESLKTRTFSHA---SDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERL 244 (291)
T ss_dssp C-CCE-----EEC-----CCGGGCCHHHHHHCEEEHH---HHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCC
T ss_pred ccccc-----hhhhccCCCCceeeCchhhcCCCCCch---hhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHccCCCC
Confidence 32211 111223567889999999988777654 999999999983222 110 011111 01
Q ss_pred cCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhcccCC
Q 041467 684 IKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGLRLP 721 (746)
Q Consensus 684 ~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~~~~ 721 (746)
.......+.+..++..|+...|. ||+..++...+....
T Consensus 245 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 283 (291)
T 1u46_A 245 PRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQ 283 (291)
T ss_dssp CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred CCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhC
Confidence 11123334444555555555555 788887766555443
No 251
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=99.97 E-value=1.8e-31 Score=286.53 Aligned_cols=184 Identities=22% Similarity=0.269 Sum_probs=146.9
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecC-----Cc
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSI-----DF 542 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~-----~~ 542 (746)
..++|+..+.||+|+||.||+ ||||++.... ......+.+|++++++++||||+++++++... ..
T Consensus 9 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 88 (353)
T 2b9h_A 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNE 88 (353)
T ss_dssp SCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCC
T ss_pred cccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccce
Confidence 457899999999999999997 8999986432 33456788999999999999999999998764 56
Q ss_pred ccchhhhccCCccc----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccC
Q 041467 543 EGFDFKAISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618 (746)
Q Consensus 543 ~~lv~e~~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~ 618 (746)
.++||||+. |++. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+|+....
T Consensus 89 ~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~ 164 (353)
T 2b9h_A 89 VYIIQELMQ-TDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDE 164 (353)
T ss_dssp EEEEECCCS-EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECC-
T ss_pred EEEEEeccC-ccHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEeccccccccc
Confidence 789999997 4554 45789999999999999999999999 999999999999999999999999999987643
Q ss_pred CCCCCC--cccccccccccccccccccccccc-cccccCCCccceeeccceee
Q 041467 619 YEPGTT--AETASSSIGINGTVGYVAPVIIAA-RNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 619 ~~~~~~--~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~~~~~DiwSlG~i~~ 668 (746)
...... ..........+||+.|+|||++.+ ..++ .++||||+||++|
T Consensus 165 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~---~~~Di~slG~il~ 214 (353)
T 2b9h_A 165 SAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYS---RAMDVWSCGCILA 214 (353)
T ss_dssp ---------------CCCCCCGGGCCHHHHHSCCCCC---HHHHHHHHHHHHH
T ss_pred ccccccCccccccchhhccccccccCCeeeccCCCcc---chhhHHHHHHHHH
Confidence 322110 011112334689999999999865 4444 3599999999998
No 252
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.97 E-value=1.2e-29 Score=269.86 Aligned_cols=274 Identities=19% Similarity=0.220 Sum_probs=151.6
Q ss_pred CCcccccCccccccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccc
Q 041467 4 NNLLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDIL 83 (746)
Q Consensus 4 n~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~ 83 (746)
|.+..+|... .+.|++|+|++|.+++..|..|.++++|++|+|++|++++..|..|+++++|++|+|++|.+. .+|
T Consensus 43 ~~l~~ip~~~---~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~ 118 (332)
T 2ft3_A 43 LGLKAVPKEI---SPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIP 118 (332)
T ss_dssp SCCSSCCSCC---CTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCC
T ss_pred CCccccCCCC---CCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccC
Confidence 4445454433 368999999999999888889999999999999999999888999999999999999999986 455
Q ss_pred hhhcCCCCCCEEEccCCCCc----CcccCCCCCCEEeccCCCcccccCCCCCcEeeCccCcccccCCccccCCCCCCEEE
Q 041467 84 TEICSLFKLERLRIDCGGRI----DSLGHLKSLLLLSLAFNQFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLN 159 (746)
Q Consensus 84 ~~~~~l~~L~~L~l~~~~~~----~~~~~l~~L~~L~Ls~N~l~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 159 (746)
..+. ++|++|+++++... ..|.++++|+.|++++|.+.. .+..+..|..+ +|++|+
T Consensus 119 ~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~-----------------~~~~~~~~~~l-~L~~L~ 178 (332)
T 2ft3_A 119 PNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLEN-----------------SGFEPGAFDGL-KLNYLR 178 (332)
T ss_dssp SSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBG-----------------GGSCTTSSCSC-CCSCCB
T ss_pred cccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCcccc-----------------CCCCcccccCC-ccCEEE
Confidence 5443 56666666554322 224445555555555554421 12334444444 455555
Q ss_pred ccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeec
Q 041467 160 LGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTM 239 (746)
Q Consensus 160 Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L 239 (746)
+++|.+++.+ ..+. ++|++|++++|.+++..|..+..++ +|+.|++++|++++..|.+|..+++|++|+|
T Consensus 179 l~~n~l~~l~-------~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 248 (332)
T 2ft3_A 179 ISEAKLTGIP-------KDLP--ETLNELHLDHNKIQAIELEDLLRYS-KLYRLGLGHNQIRMIENGSLSFLPTLRELHL 248 (332)
T ss_dssp CCSSBCSSCC-------SSSC--SSCSCCBCCSSCCCCCCTTSSTTCT-TCSCCBCCSSCCCCCCTTGGGGCTTCCEEEC
T ss_pred CcCCCCCccC-------cccc--CCCCEEECCCCcCCccCHHHhcCCC-CCCEEECCCCcCCcCChhHhhCCCCCCEEEC
Confidence 5555444321 1111 3444555555555444444444444 3555555555554444444445555555555
Q ss_pred ccccceecCCcCCCCCCCCceeeccccccccccccccccc---------ChHHhhhccCC--CCCCccccCCCCCCeeee
Q 041467 240 ESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNL---------TLQTYLFNNLQ--GNIPSSLANCKSLLGLSV 308 (746)
Q Consensus 240 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l---------~~l~~l~n~l~--~~~p~~~~~l~~L~~L~L 308 (746)
++|++. .+|..+..+++|++|++++|++++..+..+... +.+.+.+|.+. +..|..|..+++|+.+++
T Consensus 249 ~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N~~~~~~~~~~~~~~l~~L~~l~l 327 (332)
T 2ft3_A 249 DNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNNPVPYWEVQPATFRCVTDRLAIQF 327 (332)
T ss_dssp CSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSSSSCGGGSCGGGGTTBCCSTTEEC
T ss_pred CCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeecCcccccccCcccccccchhhhhhc
Confidence 555444 344444445555555555555443332222111 11111111111 234455666666666666
Q ss_pred cCCc
Q 041467 309 SHNK 312 (746)
Q Consensus 309 s~N~ 312 (746)
++|+
T Consensus 328 ~~n~ 331 (332)
T 2ft3_A 328 GNYK 331 (332)
T ss_dssp ----
T ss_pred cccc
Confidence 6654
No 253
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=99.97 E-value=3.6e-32 Score=281.65 Aligned_cols=172 Identities=24% Similarity=0.316 Sum_probs=141.4
Q ss_pred hhcCCCCCCeEeecCCeeEEE-------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecC-Ccccchhhh
Q 041467 478 ATNNFSPANKIREGGFNIVYN-------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSI-DFEGFDFKA 549 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~-------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~-~~~~lv~e~ 549 (746)
..++|+..+.||+|+||.||+ ||||++... ...+.+.+|++++++++||||+++++++... +..++||||
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~--~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 96 (278)
T 1byg_A 19 NMKELKLLQTIGKGEFGDVMLGDYRGNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 96 (278)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTEEEEEEECCCC--C--HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred ChhhceEEeEEecCCCceEEEEEEcCCEEEEEEecch--hHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEec
Confidence 457899999999999999997 899998643 2456799999999999999999999997654 478999999
Q ss_pred ccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCC
Q 041467 550 ISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPG 622 (746)
Q Consensus 550 ~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~ 622 (746)
+++|+|. ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 97 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~--- 170 (278)
T 1byg_A 97 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST--- 170 (278)
T ss_dssp CTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC----------
T ss_pred CCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeecccccccccc---
Confidence 9999886 12378999999999999999999999 9999999999999999999999999999764321
Q ss_pred CCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 623 TTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 623 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.....+++.|+|||++.+..++.+ +||||+||++|
T Consensus 171 --------~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~il~ 205 (278)
T 1byg_A 171 --------QDTGKLPVKWTAPEALREKKFSTK---SDVWSFGILLW 205 (278)
T ss_dssp -------------CCTTTSCHHHHHHCCCCHH---HHHHHHHHHHH
T ss_pred --------ccCCCccccccCHHHhCCCCCCch---hcHHHHHHHHH
Confidence 112457889999999988776554 99999999998
No 254
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=99.97 E-value=7.3e-32 Score=288.18 Aligned_cols=182 Identities=22% Similarity=0.266 Sum_probs=150.4
Q ss_pred hhhcCCCCCCeEeecCCeeEEE-------EEeehhhhhhhhhhHHHHHHHHHhhc--CCCCceeeEEEEEecCC----cc
Q 041467 477 KATNNFSPANKIREGGFNIVYN-------VAMKVANLKQKEASRSFAAEFNALRN--IRHRNLIKIITICSSID----FE 543 (746)
Q Consensus 477 ~~~~~~~~~~~ig~g~~g~v~~-------vavK~~~~~~~~~~~~~~~E~~~l~~--l~HpnIv~l~~~~~~~~----~~ 543 (746)
...++|+..+.||+|+||.||+ ||||++... ..+.+.+|+++++. ++||||+++++++.... ..
T Consensus 39 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~ 115 (342)
T 1b6c_B 39 TIARTIVLQESIGKGRFGEVWRGKWRGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL 115 (342)
T ss_dssp HHHHHCEEEEEEEEETTEEEEEEEETTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCE
T ss_pred cccccEEEEeeecCCCCcEEEEEEEcCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCcccee
Confidence 3456899999999999999997 899998633 34567889988887 78999999999998876 78
Q ss_pred cchhhhccCCccc----ccCCCHHHHHHHHHHHHHHHHHHH--------hcCCCCeEEcCCCCCCeeeCCCCcEEEcccc
Q 041467 544 GFDFKAISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLR--------HHCQPSIVHGDLKPSNILLDQDVVTHVGDLG 611 (746)
Q Consensus 544 ~lv~e~~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH--------~~~~~~ivHrDlkp~NILl~~~~~~ki~DfG 611 (746)
++||||+++|+|. ...+++.++..++.|++.|++||| +. +|+||||||+||+++.++.+||+|||
T Consensus 116 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg 192 (342)
T 1b6c_B 116 WLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCCIADLG 192 (342)
T ss_dssp EEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEECTTSCEEECCCT
T ss_pred EEEEeecCCCcHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEECCCCCEEEEECC
Confidence 9999999999986 457899999999999999999999 66 99999999999999999999999999
Q ss_pred ccccccCCCCCCCcccccccccccccccccccccccccccc---cCCCccceeeccceee
Q 041467 612 LAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLE---NREKRHTVMSFPQRFA 668 (746)
Q Consensus 612 la~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~---~~~~~~DiwSlG~i~~ 668 (746)
+++........ .........||+.|+|||++.+.... .++.++|||||||++|
T Consensus 193 ~~~~~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ 248 (342)
T 1b6c_B 193 LAVRHDSATDT----IDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFW 248 (342)
T ss_dssp TCEEEETTTTE----EEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHH
T ss_pred Cceeccccccc----cccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHH
Confidence 99876433211 01122346799999999999875322 1124699999999998
No 255
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=99.97 E-value=4.9e-32 Score=287.69 Aligned_cols=229 Identities=18% Similarity=0.214 Sum_probs=168.5
Q ss_pred hhcCCCCCCeEeecCCeeEEE--------------EEeehhhhh-hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCc
Q 041467 478 ATNNFSPANKIREGGFNIVYN--------------VAMKVANLK-QKEASRSFAAEFNALRNIRHRNLIKIITICSSIDF 542 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~--------------vavK~~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~ 542 (746)
..++|+..+.||+|+||.||+ ||||++... .......+.+|+.++++++||||+++++++...+.
T Consensus 28 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 107 (327)
T 2yfx_A 28 PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLP 107 (327)
T ss_dssp CGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred ChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCC
Confidence 346899999999999999995 899988533 23445678999999999999999999999999999
Q ss_pred ccchhhhccCCccc-----c-------cCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCC---CCcEEE
Q 041467 543 EGFDFKAISNGQLR-----L-------CNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQ---DVVTHV 607 (746)
Q Consensus 543 ~~lv~e~~~~g~l~-----~-------~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~---~~~~ki 607 (746)
.++||||+++|+|. . ..+++.++..++.|++.||+|||+. +|+||||||+||+++. +..+||
T Consensus 108 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~kl 184 (327)
T 2yfx_A 108 RFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKI 184 (327)
T ss_dssp CEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEE
T ss_pred cEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceEEE
Confidence 99999999999885 1 3489999999999999999999999 9999999999999984 456999
Q ss_pred ccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-cc-------ccchh
Q 041467 608 GDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ-------NKSIL 679 (746)
Q Consensus 608 ~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~-------~~~i~ 679 (746)
+|||+++........ .......||+.|+|||++.+..++.+ +|||||||++|.... .. ...+.
T Consensus 185 ~Dfg~~~~~~~~~~~------~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~il~ellt~g~~p~~~~~~~~~~ 255 (327)
T 2yfx_A 185 GDFGMARDIYRASYY------RKGGCAMLPVKWMPPEAFMEGIFTSK---TDTWSFGVLLWEIFSLGYMPYPSKSNQEVL 255 (327)
T ss_dssp CCCHHHHHHHC------------CCGGGSCGGGCCHHHHHHCCCCHH---HHHHHHHHHHHHHHTTSCCSSTTCCHHHHH
T ss_pred Ccccccccccccccc------ccCCCcCCCcceeCHhHhcCCCCCch---hhHHHHHHHHHHHHcCCCCCCCCcCHHHHH
Confidence 999999865432211 11223568999999999988776554 999999999983221 10 00111
Q ss_pred ----h-ccccCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhcc
Q 041467 680 ----K-SAGIKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGL 718 (746)
Q Consensus 680 ----~-~~~~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~ 718 (746)
. ..........+.+..++..|+...|. ||+..++...++
T Consensus 256 ~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~ 300 (327)
T 2yfx_A 256 EFVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIE 300 (327)
T ss_dssp HHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred HHHhcCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHH
Confidence 0 01112223344455555555555666 788876665444
No 256
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=99.97 E-value=7.2e-32 Score=282.76 Aligned_cols=184 Identities=21% Similarity=0.277 Sum_probs=143.7
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEec---------
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSS--------- 539 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~--------- 539 (746)
..++|+..+.||+|+||.||+ ||||++... ....+.+.+|++++++++||||+++++++.+
T Consensus 4 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (303)
T 1zy4_A 4 YASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMT 82 (303)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred ccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence 356789999999999999997 899988543 3345678999999999999999999998865
Q ss_pred ----CCcccchhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcc
Q 041467 540 ----IDFEGFDFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGD 609 (746)
Q Consensus 540 ----~~~~~lv~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~D 609 (746)
.+..++||||+++|+|. ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|
T Consensus 83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~kl~d 159 (303)
T 1zy4_A 83 AVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGD 159 (303)
T ss_dssp ---CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECC
T ss_pred ccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCEEEee
Confidence 34678999999999986 33578899999999999999999999 999999999999999999999999
Q ss_pred ccccccccCCCCCCC------ccccccccccccccccccccccccc-ccccCCCccceeeccceee
Q 041467 610 LGLAKFLYGYEPGTT------AETASSSIGINGTVGYVAPVIIAAR-NLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 610 fGla~~~~~~~~~~~------~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~~~~~DiwSlG~i~~ 668 (746)
||+++.......... ...........||+.|+|||++.+. .+ +.++||||+||++|
T Consensus 160 fg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~---~~~~Di~slG~il~ 222 (303)
T 1zy4_A 160 FGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHY---NEKIDMYSLGIIFF 222 (303)
T ss_dssp CCCCSCTTC-------------------------CTTSCHHHHTSCSCC---CTHHHHHHHHHHHH
T ss_pred CcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCC---cchhhHHHHHHHHH
Confidence 999987643211000 0001223346799999999999865 34 34699999999998
No 257
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=99.97 E-value=3.8e-32 Score=297.30 Aligned_cols=177 Identities=22% Similarity=0.265 Sum_probs=131.4
Q ss_pred hcCCCC-CCeEeecCCeeEEE-----------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEec--CCccc
Q 041467 479 TNNFSP-ANKIREGGFNIVYN-----------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSS--IDFEG 544 (746)
Q Consensus 479 ~~~~~~-~~~ig~g~~g~v~~-----------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~--~~~~~ 544 (746)
.+.|+. .+.||+|+||.||+ ||||++... ...+.+.+|++++++++|||||++++++.. ....+
T Consensus 19 ~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~ 96 (405)
T 3rgf_A 19 EDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGT--GISMSACREIALLRELKHPNVISLQKVFLSHADRKVW 96 (405)
T ss_dssp HHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSS--SCCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEE
T ss_pred hhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCC--CCCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEE
Confidence 344655 56899999999997 899988633 234568899999999999999999999954 56789
Q ss_pred chhhhccCCccc-------------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeee----CCCCcEEE
Q 041467 545 FDFKAISNGQLR-------------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL----DQDVVTHV 607 (746)
Q Consensus 545 lv~e~~~~g~l~-------------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl----~~~~~~ki 607 (746)
+||||+.++.+. ...+++..+..++.||+.||+|||+. +|+||||||+|||+ +.++.+||
T Consensus 97 lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl 173 (405)
T 3rgf_A 97 LLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKI 173 (405)
T ss_dssp EEEECCSEEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTCEEE
T ss_pred EEEeCCCCCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCcEEE
Confidence 999999754332 12489999999999999999999999 99999999999999 67899999
Q ss_pred ccccccccccCCCCCCCcccccccccccccccccccccccccc-cccCCCccceeeccceee
Q 041467 608 GDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARN-LENREKRHTVMSFPQRFA 668 (746)
Q Consensus 608 ~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~~~~~DiwSlG~i~~ 668 (746)
+|||+|+....... ........+||++|+|||++.+.. ++ .++||||+||++|
T Consensus 174 ~Dfg~a~~~~~~~~-----~~~~~~~~~gt~~y~aPE~~~~~~~~~---~~~DiwSlG~il~ 227 (405)
T 3rgf_A 174 ADMGFARLFNSPLK-----PLADLDPVVVTFWYRAPELLLGARHYT---KAIDIWAIGCIFA 227 (405)
T ss_dssp CCTTCCC---------------------CCCTTCCHHHHTTCCSCC---HHHHHHHHHHHHH
T ss_pred EECCCceecCCCCc-----ccccCCCceecCcccCchhhcCCCccc---chhhhHHHHHHHH
Confidence 99999987643211 112233478999999999998754 44 4599999999998
No 258
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=99.97 E-value=1e-32 Score=291.81 Aligned_cols=242 Identities=20% Similarity=0.255 Sum_probs=170.9
Q ss_pred HHHhhhhcCCCCCCeEeecCCeeEEE------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCccc
Q 041467 473 AELSKATNNFSPANKIREGGFNIVYN------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEG 544 (746)
Q Consensus 473 ~~~~~~~~~~~~~~~ig~g~~g~v~~------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~ 544 (746)
.++....++|+..+.||+|+||.||+ ||+|++.... ....+.+.+|++++++++||||+++++++.+.+..+
T Consensus 26 ~~~~i~~~~~~~~~~lg~G~~g~V~~~~~~~~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 105 (319)
T 2y4i_B 26 QEWDIPFEQLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLA 105 (319)
T ss_dssp GGSSSCCSCEECCCBCCCSSSSEEEEEEESSSEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEE
T ss_pred ccccCCHHHeEEeeEeccCCceEEEEEEEcCeEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceE
Confidence 34444567899999999999999997 8999886442 223456889999999999999999999999999999
Q ss_pred chhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccC
Q 041467 545 FDFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618 (746)
Q Consensus 545 lv~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~ 618 (746)
+||||+++|++. ...+++.++..++.|++.|++|||+. +|+||||||+||+++ ++.+||+|||+++....
T Consensus 106 iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~ 181 (319)
T 2y4i_B 106 IITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFSISGV 181 (319)
T ss_dssp EECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC----
T ss_pred EEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCcccccc
Confidence 999999999886 23589999999999999999999999 999999999999998 68999999999876532
Q ss_pred CCCCCCccccccccccccccccccccccccccc------ccCCCccceeeccceeecccccc-------ccc----hhh-
Q 041467 619 YEPGTTAETASSSIGINGTVGYVAPVIIAARNL------ENREKRHTVMSFPQRFALNEKKQ-------NKS----ILK- 680 (746)
Q Consensus 619 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~------~~~~~~~DiwSlG~i~~~~~~~~-------~~~----i~~- 680 (746)
.... ..........||+.|+|||++.+... ..++.++|||||||++|...... ... +..
T Consensus 182 ~~~~---~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~ 258 (319)
T 2y4i_B 182 LQAG---RREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTG 258 (319)
T ss_dssp ---------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHTT
T ss_pred cccc---ccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccC
Confidence 2211 11122234569999999999975321 12355699999999998221110 000 000
Q ss_pred ccc-----cCCCccHHHHHHhhCCCCCCCCCCCCccchhhhcccCCCCC
Q 041467 681 SAG-----IKGKKTVSFFLSLLSPSCSVFPLTPSSNSFTLLGLRLPSRS 724 (746)
Q Consensus 681 ~~~-----~~~~~~~~~~~~~~~~~~~~~p~~p~~~~~~~~~~~~~~~~ 724 (746)
..+ ..+......+..|++.++. +||+..++...++.+..+.
T Consensus 259 ~~~~~~~~~~~~~l~~li~~~l~~~p~---~Rpt~~~l~~~l~~l~~~~ 304 (319)
T 2y4i_B 259 MKPNLSQIGMGKEISDILLFCWAFEQE---ERPTFTKLMDMLEKLPKRN 304 (319)
T ss_dssp CCCCCCCSSCCTTHHHHHHHHHCSSTT---TSCCHHHHHHHHTTC----
T ss_pred CCCCCCcCCCCHHHHHHHHHHhcCChh---hCcCHHHHHHHHHHHHHhh
Confidence 001 1123444555555554443 2788888888777776554
No 259
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=99.97 E-value=1.4e-31 Score=285.12 Aligned_cols=188 Identities=21% Similarity=0.234 Sum_probs=134.2
Q ss_pred hhhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCC-CCceeeEEEEEec-------
Q 041467 477 KATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIR-HRNLIKIITICSS------- 539 (746)
Q Consensus 477 ~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~-HpnIv~l~~~~~~------- 539 (746)
....+|+..+.||+|+||.||+ ||||++........+.+.+|+.+++++. |||||++++++..
T Consensus 25 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 104 (337)
T 3ll6_A 25 LGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDT 104 (337)
T ss_dssp ETTEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTT
T ss_pred ccCceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhcccccccccccccc
Confidence 3445789999999999999997 8999886555555677999999999996 9999999999843
Q ss_pred -CCcccchhhhccCCccc--------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEEcCCCCCCeeeCCCCcEEEc
Q 041467 540 -IDFEGFDFKAISNGQLR--------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPS--IVHGDLKPSNILLDQDVVTHVG 608 (746)
Q Consensus 540 -~~~~~lv~e~~~~g~l~--------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~--ivHrDlkp~NILl~~~~~~ki~ 608 (746)
....+++|||+. |++. ...+++.++..++.||+.||+|||+. + |+||||||+||+++.++.+||+
T Consensus 105 ~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl~ 180 (337)
T 3ll6_A 105 GQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKLC 180 (337)
T ss_dssp SSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEBC
T ss_pred CCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEEe
Confidence 334789999996 5553 34689999999999999999999998 7 9999999999999999999999
Q ss_pred cccccccccCCCCCCCc----ccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 609 DLGLAKFLYGYEPGTTA----ETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 609 DfGla~~~~~~~~~~~~----~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
|||+++........... ..........||+.|+|||++.......++.++|||||||++|
T Consensus 181 Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~ 244 (337)
T 3ll6_A 181 DFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILY 244 (337)
T ss_dssp CCTTCBCCSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHH
T ss_pred cCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHH
Confidence 99999876433221000 0001122467999999999994322222345699999999998
No 260
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=99.97 E-value=1.7e-31 Score=279.58 Aligned_cols=176 Identities=23% Similarity=0.370 Sum_probs=146.7
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchh
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDF 547 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 547 (746)
.++|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++||||+++++++...+..++||
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 81 (299)
T 2r3i_A 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVF 81 (299)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cchhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEE
Confidence 36788999999999999997 8999986543 223467889999999999999999999999999999999
Q ss_pred hhccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCC
Q 041467 548 KAISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYE 620 (746)
Q Consensus 548 e~~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~ 620 (746)
||+. |++. ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 82 e~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~ 157 (299)
T 2r3i_A 82 EFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 157 (299)
T ss_dssp ECCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCS
T ss_pred Eccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhhhccCCc
Confidence 9997 4554 24689999999999999999999999 99999999999999999999999999998763221
Q ss_pred CCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 621 PGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 621 ~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.......||+.|+|||++.+... ++.++||||+||++|
T Consensus 158 --------~~~~~~~~~~~y~aPE~~~~~~~--~~~~~Di~slG~~l~ 195 (299)
T 2r3i_A 158 --------RTYTHEVVTLWYRAPEILLGAKY--YSTAVDIWSLGCIFA 195 (299)
T ss_dssp --------BCTTSCBCCCTTCCHHHHTTCSS--CCTHHHHHHHHHHHH
T ss_pred --------cccCcccccccccCcHHhhcccc--CChHHHHHHHHHHHH
Confidence 11223568999999999987653 234699999999998
No 261
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=99.97 E-value=2.3e-31 Score=280.74 Aligned_cols=175 Identities=19% Similarity=0.235 Sum_probs=147.3
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchhh
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDFK 548 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~e 548 (746)
..++|+..+.||+|+||.||+ ||||++... ...+.+.+|++++++++||||+++++++...+..++|||
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 104 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVE--SDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVME 104 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETT--SCCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCch--HHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEee
Confidence 456789999999999999997 899988643 235678999999999999999999999999999999999
Q ss_pred hccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCC
Q 041467 549 AISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPG 622 (746)
Q Consensus 549 ~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~ 622 (746)
|+++|++. ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 105 ~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~-- 179 (314)
T 3com_A 105 YCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTM-- 179 (314)
T ss_dssp CCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECBTTB--
T ss_pred cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhhhhhc--
Confidence 99998886 45789999999999999999999999 99999999999999999999999999998763321
Q ss_pred CCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 623 TTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 623 ~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.......||+.|+|||++.+..++.+ +||||+||++|
T Consensus 180 ------~~~~~~~~~~~y~aPE~~~~~~~~~~---~Di~slG~il~ 216 (314)
T 3com_A 180 ------AKRNTVIGTPFWMAPEVIQEIGYNCV---ADIWSLGITAI 216 (314)
T ss_dssp ------SCBCCCCSCGGGCCHHHHSSSCBCTT---HHHHHHHHHHH
T ss_pred ------cccCccCCCCCccChhhcCCCCCCcc---ccHHHHHHHHH
Confidence 11234678999999999988776554 99999999998
No 262
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=99.97 E-value=9.8e-32 Score=281.92 Aligned_cols=183 Identities=23% Similarity=0.302 Sum_probs=135.7
Q ss_pred hhhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccch
Q 041467 477 KATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 477 ~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
...++|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++||||+++++++...+..++|
T Consensus 12 i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 91 (303)
T 2vwi_A 12 INRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLV 91 (303)
T ss_dssp -CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEE
T ss_pred cchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEE
Confidence 3457899999999999999996 8999986543 33456788999999999999999999999999999999
Q ss_pred hhhccCCccc-------------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccccc
Q 041467 547 FKAISNGQLR-------------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLA 613 (746)
Q Consensus 547 ~e~~~~g~l~-------------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla 613 (746)
|||+++|++. ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 92 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~ 168 (303)
T 2vwi_A 92 MKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVS 168 (303)
T ss_dssp EECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCHHH
T ss_pred ehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEeccch
Confidence 9999999875 13489999999999999999999999 9999999999999999999999999999
Q ss_pred ccccCCCCCCCcccccccccccccccccccccccc-cccccCCCccceeeccceee
Q 041467 614 KFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAA-RNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~~~~~DiwSlG~i~~ 668 (746)
+........ ..........||+.|+|||++.+ ..++ .++||||+||++|
T Consensus 169 ~~~~~~~~~---~~~~~~~~~~~~~~y~aPE~~~~~~~~~---~~~Di~slG~il~ 218 (303)
T 2vwi_A 169 AFLATGGDI---TRNKVRKTFVGTPCWMAPEVMEQVRGYD---FKADIWSFGITAI 218 (303)
T ss_dssp HHCC------------------CCCTTCCHHHHHHHHCCC---THHHHHHHHHHHH
T ss_pred heeccCCCc---cchhhhcccCCCccccCHHHhccccCCC---chhhHHHHHHHHH
Confidence 876432211 01112234679999999999876 3343 4599999999998
No 263
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=99.97 E-value=7.7e-32 Score=281.76 Aligned_cols=181 Identities=21% Similarity=0.281 Sum_probs=147.7
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEE-ecCCcccchh
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITIC-SSIDFEGFDF 547 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~-~~~~~~~lv~ 547 (746)
..++|+..+.||+|+||.||+ ||||++.... ..+.+.+|+++++.++|++++..++++ ...+..++||
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 3uzp_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS--SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred eccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc--chhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEE
Confidence 356899999999999999997 8999875432 234689999999999998877666655 4566789999
Q ss_pred hhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeee---CCCCcEEEccccccccccC
Q 041467 548 KAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL---DQDVVTHVGDLGLAKFLYG 618 (746)
Q Consensus 548 e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl---~~~~~~ki~DfGla~~~~~ 618 (746)
||+ +|+|. ...+++.++..++.|++.|++|||++ +|+||||||+||++ +.++.+||+|||+++....
T Consensus 85 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~ 160 (296)
T 3uzp_A 85 ELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160 (296)
T ss_dssp ECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred Eec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccc
Confidence 999 88875 45689999999999999999999999 99999999999999 4789999999999987654
Q ss_pred CCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 619 YEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 619 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
...... ..........||+.|+|||++.+..++.+ +|||||||++|
T Consensus 161 ~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~---~Di~slG~il~ 206 (296)
T 3uzp_A 161 ARTHQH-IPYRENKNLTGTARYASINTHLGIEQSRR---DDLESLGYVLM 206 (296)
T ss_dssp TTTCCB-CCCCCSCCCCSCTTTCCHHHHTTCCCCHH---HHHHHHHHHHH
T ss_pred cccccc-cccccccccccccccCChhhhcCCCCCcc---hhhHHHHHHHH
Confidence 332111 01112344689999999999998877554 99999999998
No 264
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=99.97 E-value=1.9e-31 Score=285.72 Aligned_cols=175 Identities=19% Similarity=0.326 Sum_probs=151.7
Q ss_pred hcCCCCCCeEeecCCeeEEE-------EEeehhhhhhhhh-----------------hHHHHHHHHHhhcCCCCceeeEE
Q 041467 479 TNNFSPANKIREGGFNIVYN-------VAMKVANLKQKEA-----------------SRSFAAEFNALRNIRHRNLIKII 534 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~-------vavK~~~~~~~~~-----------------~~~~~~E~~~l~~l~HpnIv~l~ 534 (746)
.++|+..+.||+|+||.||+ ||||++....... .+.+.+|++++++++||||++++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~ 109 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEKDNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCE 109 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEETTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCS
T ss_pred cCceEEEEEEcCCCCeEEEEEEcCCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEE
Confidence 46899999999999999997 8999987553221 17899999999999999999999
Q ss_pred EEEecCCcccchhhhccCCccc-------------ccCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeEEcCCCCCCeeeC
Q 041467 535 TICSSIDFEGFDFKAISNGQLR-------------LCNLSLTQRVNIAIDVAFAIEYLRH-HCQPSIVHGDLKPSNILLD 600 (746)
Q Consensus 535 ~~~~~~~~~~lv~e~~~~g~l~-------------~~~l~~~~~~~i~~~i~~~l~yLH~-~~~~~ivHrDlkp~NILl~ 600 (746)
+++.+.+..++||||+++|+|. ...+++..+..++.|++.|++|||+ . +|+||||||+||+++
T Consensus 110 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Nil~~ 186 (348)
T 2pml_X 110 GIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNILMD 186 (348)
T ss_dssp EEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGEEEC
T ss_pred EEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhEEEc
Confidence 9999999999999999998874 2457899999999999999999999 8 999999999999999
Q ss_pred CCCcEEEccccccccccCCCCCCCccccccccccccccccccccccccc-ccccCCCccceeeccceee
Q 041467 601 QDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAAR-NLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 601 ~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~~~~~DiwSlG~i~~ 668 (746)
.++.+||+|||+++..... ......||+.|+|||++.+. .++. .++||||+||++|
T Consensus 187 ~~~~~kl~dfg~~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~~--~~~Di~slG~il~ 243 (348)
T 2pml_X 187 KNGRVKLSDFGESEYMVDK----------KIKGSRGTYEFMPPEFFSNESSYNG--AKVDIWSLGICLY 243 (348)
T ss_dssp TTSCEEECCCTTCEECBTT----------EECSSCSCGGGCCGGGGSSCCCEEH--HHHHHHHHHHHHH
T ss_pred CCCcEEEeccccccccccc----------cccCCCCCcCccCchhhcCCCCCCc--chhhHHHHHHHHH
Confidence 9999999999999875321 22346789999999999877 4543 1599999999998
No 265
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=99.97 E-value=1e-31 Score=293.18 Aligned_cols=173 Identities=21% Similarity=0.291 Sum_probs=145.9
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCC--------CCceeeEEEEEe---
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIR--------HRNLIKIITICS--- 538 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~--------HpnIv~l~~~~~--- 538 (746)
.++|+..+.||+|+||.||+ ||||++... ....+.+.+|+++++.++ ||||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~ 114 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISG 114 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecC
Confidence 46799999999999999997 899998643 334567889999999996 888999999998
Q ss_pred -cCCcccchhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCC--------
Q 041467 539 -SIDFEGFDFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDV-------- 603 (746)
Q Consensus 539 -~~~~~~lv~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~-------- 603 (746)
.....++||||+.++.+. ...+++.++..++.||+.||+|||+++ +|+||||||+|||++.++
T Consensus 115 ~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~~~~~~~ 192 (397)
T 1wak_A 115 VNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYIRRLAA 192 (397)
T ss_dssp TTEEEEEEEECCCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHHHHHHHH
T ss_pred CCCceEEEEEeccCccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchhhhhhhh
Confidence 455789999999554443 246899999999999999999999964 899999999999999775
Q ss_pred -----------------------------------------cEEEccccccccccCCCCCCCcccccccccccccccccc
Q 041467 604 -----------------------------------------VTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVA 642 (746)
Q Consensus 604 -----------------------------------------~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~a 642 (746)
.+||+|||+|+..... ....+||+.|+|
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~-----------~~~~~gt~~y~a 261 (397)
T 1wak_A 193 EATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH-----------FTEDIQTRQYRS 261 (397)
T ss_dssp HHC---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC-----------SCSCCSCGGGCC
T ss_pred hhHHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc-----------CccCCCCCcccC
Confidence 8999999999875321 223578999999
Q ss_pred cccccccccccCCCccceeeccceee
Q 041467 643 PVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 643 PE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
||++.+..++. ++|||||||++|
T Consensus 262 PE~~~~~~~~~---~~DiwslG~il~ 284 (397)
T 1wak_A 262 LEVLIGSGYNT---PADIWSTACMAF 284 (397)
T ss_dssp HHHHHTSCCCT---HHHHHHHHHHHH
T ss_pred ChhhcCCCCCc---HHHHHHHHHHHH
Confidence 99999887655 599999999998
No 266
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=99.97 E-value=2.8e-31 Score=285.03 Aligned_cols=172 Identities=19% Similarity=0.279 Sum_probs=143.7
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCc-----
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDF----- 542 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~----- 542 (746)
.++|...+.||+|+||.||+ ||||++.... ....+.+.+|+.+++.++||||+++++++...+.
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 102 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 102 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccce
Confidence 46789999999999999997 8999986432 3345678999999999999999999999987654
Q ss_pred -ccchhhhccCCccc---ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccC
Q 041467 543 -EGFDFKAISNGQLR---LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618 (746)
Q Consensus 543 -~~lv~e~~~~g~l~---~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~ 618 (746)
.++||||+. |++. ...+++.++..++.||+.||+|||++ +|+||||||+||+++.++.+||+|||+++....
T Consensus 103 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 178 (353)
T 3coi_A 103 DFYLVMPFMQ-TDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHADA 178 (353)
T ss_dssp CCEEEEECCS-EEGGGTTTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTCTTC---
T ss_pred eEEEEecccc-CCHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeecccccCCCC
Confidence 489999997 5654 44689999999999999999999999 999999999999999999999999999976421
Q ss_pred CCCCCCcccccccccccccccccccccccc-cccccCCCccceeeccceee
Q 041467 619 YEPGTTAETASSSIGINGTVGYVAPVIIAA-RNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 619 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~~~~~DiwSlG~i~~ 668 (746)
......||+.|+|||++.+ ..++ .++||||+||++|
T Consensus 179 -----------~~~~~~~t~~y~aPE~~~~~~~~~---~~~Di~slG~il~ 215 (353)
T 3coi_A 179 -----------EMTGYVVTRWYRAPEVILSWMHYN---QTVDIWSVGCIMA 215 (353)
T ss_dssp ----------------CCSBCCSCHHHHSCCSCCC---TTHHHHHHHHHHH
T ss_pred -----------CccccccCcCcCCHHHHhCcCCCC---chhhHHHHHHHHH
Confidence 1223678999999999987 3443 4599999999998
No 267
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=99.97 E-value=4.4e-31 Score=276.33 Aligned_cols=179 Identities=27% Similarity=0.323 Sum_probs=151.4
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---------hhhhHHHHHHHHHhhcCC-CCceeeEEEEEe
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---------KEASRSFAAEFNALRNIR-HRNLIKIITICS 538 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---------~~~~~~~~~E~~~l~~l~-HpnIv~l~~~~~ 538 (746)
..++|+..+.||+|+||.||+ ||||++.... ....+.+.+|+++++++. ||||+++++++.
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 94 (298)
T 1phk_A 15 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 94 (298)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeec
Confidence 457899999999999999997 8999885432 233457889999999996 999999999999
Q ss_pred cCCcccchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccccc
Q 041467 539 SIDFEGFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLA 613 (746)
Q Consensus 539 ~~~~~~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla 613 (746)
..+..++||||+++|++. ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 95 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~ 171 (298)
T 1phk_A 95 TNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFGFS 171 (298)
T ss_dssp CSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred cCCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEecccch
Confidence 999999999999999986 45789999999999999999999999 9999999999999999999999999999
Q ss_pred ccccCCCCCCCcccccccccccccccccccccccccc---cccCCCccceeeccceee
Q 041467 614 KFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARN---LENREKRHTVMSFPQRFA 668 (746)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~---~~~~~~~~DiwSlG~i~~ 668 (746)
+...... ......||+.|+|||++.+.. ...++.++||||+||++|
T Consensus 172 ~~~~~~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~ 220 (298)
T 1phk_A 172 CQLDPGE---------KLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMY 220 (298)
T ss_dssp EECCTTC---------CBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHH
T ss_pred hhcCCCc---------ccccccCCccccCHHHhccccccccccCCcccccHhHHHHHH
Confidence 8763221 123367899999999986321 122355699999999998
No 268
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=99.97 E-value=1.4e-31 Score=282.89 Aligned_cols=178 Identities=20% Similarity=0.306 Sum_probs=141.2
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEec----------
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSS---------- 539 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~---------- 539 (746)
.++|+..+.||+|+||.||+ ||||++........+.+.+|++++++++||||+++++++..
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 10 GSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 46789999999999999997 89998876655667789999999999999999999998743
Q ss_pred ----CCcccchhhhccCCccc----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeC-CCCcEEEccc
Q 041467 540 ----IDFEGFDFKAISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLD-QDVVTHVGDL 610 (746)
Q Consensus 540 ----~~~~~lv~e~~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~-~~~~~ki~Df 610 (746)
....++||||+. |++. ...+++..+..++.|++.||+|||++ +|+||||||+||+++ +++.+||+||
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl~Df 165 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLEQGPLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLVLKIGDF 165 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTTEEEECCC
T ss_pred cccccCceeEEeeccC-CCHHHHhhcCCccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCeEEEccC
Confidence 356789999997 5664 45689999999999999999999999 999999999999997 5779999999
Q ss_pred cccccccCCCCCCCcccccccccccccccccccccccc-cccccCCCccceeeccceee
Q 041467 611 GLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAA-RNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 611 Gla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~-~~~~~~~~~~DiwSlG~i~~ 668 (746)
|+++........ ........||..|+|||++.+ ..++ .++|||||||++|
T Consensus 166 g~~~~~~~~~~~-----~~~~~~~~~~~~y~aPE~~~~~~~~~---~~~Di~slG~il~ 216 (320)
T 2i6l_A 166 GLARIMDPHYSH-----KGHLSEGLVTKWYRSPRLLLSPNNYT---KAIDMWAAGCIFA 216 (320)
T ss_dssp TTCBCC-------------CCCGGGSCCTTCCHHHHHCTTCCC---HHHHHHHHHHHHH
T ss_pred ccccccCCCccc-----ccccccccccccccCcHHhcCcccCC---chhhhHhHHHHHH
Confidence 999876432211 112233568999999999876 4444 3599999999998
No 269
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=99.97 E-value=1.1e-31 Score=288.89 Aligned_cols=181 Identities=19% Similarity=0.194 Sum_probs=138.4
Q ss_pred HHHhhhhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCc-
Q 041467 473 AELSKATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSSIDF- 542 (746)
Q Consensus 473 ~~~~~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~- 542 (746)
.+.....++|+..+.||+|+||.||+ ||||++... ......+.+|++.++.++|||||+++++|...+.
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~ 94 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQD-PRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECC-TTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecC-ccccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence 44556778999999999999999996 899987533 2234457788889999999999999999976443
Q ss_pred ------ccchhhhccCCccc--------ccCCCHHHHHHHHHHHHHHHHHHH--hcCCCCeEEcCCCCCCeeeCC-CCcE
Q 041467 543 ------EGFDFKAISNGQLR--------LCNLSLTQRVNIAIDVAFAIEYLR--HHCQPSIVHGDLKPSNILLDQ-DVVT 605 (746)
Q Consensus 543 ------~~lv~e~~~~g~l~--------~~~l~~~~~~~i~~~i~~~l~yLH--~~~~~~ivHrDlkp~NILl~~-~~~~ 605 (746)
.++||||+.++... ...+++..+..++.|++.|++||| +. +|+||||||+||+++. ++.+
T Consensus 95 ~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~~~~ 171 (360)
T 3e3p_A 95 DRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEADGTL 171 (360)
T ss_dssp CTTCEEEEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTTTEE
T ss_pred cccceeEEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCCCcE
Confidence 78999999876432 456889999999999999999999 77 9999999999999996 8999
Q ss_pred EEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 606 HVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 606 ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
||+|||+|+...... ......||+.|+|||++.+... ++.++||||+||++|
T Consensus 172 kl~Dfg~a~~~~~~~---------~~~~~~gt~~y~aPE~~~~~~~--~~~~~Di~slG~il~ 223 (360)
T 3e3p_A 172 KLCDFGSAKKLSPSE---------PNVAYICSRYYRAPELIFGNQH--YTTAVDIWSVGCIFA 223 (360)
T ss_dssp EECCCTTCBCCCTTS---------CCCSTTSCGGGCCHHHHTTCSS--CCTHHHHHHHHHHHH
T ss_pred EEeeCCCceecCCCC---------CcccccCCcceeCHHHHcCCCC--CCcHHHHHHHHHHHH
Confidence 999999998764322 1234678999999999976542 234699999999998
No 270
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=99.97 E-value=1.9e-31 Score=288.26 Aligned_cols=172 Identities=13% Similarity=0.103 Sum_probs=127.8
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcC--CCCceeeEE-------EEE
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNI--RHRNLIKII-------TIC 537 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l--~HpnIv~l~-------~~~ 537 (746)
...|+..+.||+|+||.||+ ||||++.... ....+.+.+|+++++.+ +|||||+++ +++
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence 44588999999999999997 8999987532 23455678885544444 699988865 444
Q ss_pred ecCC-----------------cccchhhhccCCccc------ccCCCHHHH------HHHHHHHHHHHHHHHhcCCCCeE
Q 041467 538 SSID-----------------FEGFDFKAISNGQLR------LCNLSLTQR------VNIAIDVAFAIEYLRHHCQPSIV 588 (746)
Q Consensus 538 ~~~~-----------------~~~lv~e~~~~g~l~------~~~l~~~~~------~~i~~~i~~~l~yLH~~~~~~iv 588 (746)
...+ ..++||||++ |+|. ...+++..+ ..++.||+.||+|||++ +|+
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~---~iv 216 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSK---GLV 216 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---TEE
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHC---CCc
Confidence 3322 2699999998 8875 234566666 78889999999999999 999
Q ss_pred EcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCcccccccccccccccccccccccc--cccccCCCccceeeccce
Q 041467 589 HGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAA--RNLENREKRHTVMSFPQR 666 (746)
Q Consensus 589 HrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~--~~~~~~~~~~DiwSlG~i 666 (746)
||||||+|||++.++.+||+|||+|+.... ......||+.|+|||++.+ ..++. ++|||||||+
T Consensus 217 HrDikp~NIll~~~~~~kL~DFG~a~~~~~-----------~~~~~~~t~~y~aPE~~~~~~~~~~~---~~DiwSlG~i 282 (371)
T 3q60_A 217 HGHFTPDNLFIMPDGRLMLGDVSALWKVGT-----------RGPASSVPVTYAPREFLNASTATFTH---ALNAWQLGLS 282 (371)
T ss_dssp ETTCSGGGEEECTTSCEEECCGGGEEETTC-----------EEEGGGSCGGGCCHHHHTCSEEECCH---HHHHHHHHHH
T ss_pred cCcCCHHHEEECCCCCEEEEecceeeecCC-----------CccCccCCcCCcChhhccCCCCCcCc---cccHHHHHHH
Confidence 999999999999999999999999986521 1113567799999999986 55544 5999999999
Q ss_pred ee
Q 041467 667 FA 668 (746)
Q Consensus 667 ~~ 668 (746)
+|
T Consensus 283 l~ 284 (371)
T 3q60_A 283 IY 284 (371)
T ss_dssp HH
T ss_pred HH
Confidence 98
No 271
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=99.97 E-value=1.4e-31 Score=308.93 Aligned_cols=231 Identities=19% Similarity=0.211 Sum_probs=169.2
Q ss_pred HHhhhhcCCCCCCeEeecCCeeEEE------------EEeehhhhhh-hhhhHHHHHHHHHhhcCCCCceeeEEEEEecC
Q 041467 474 ELSKATNNFSPANKIREGGFNIVYN------------VAMKVANLKQ-KEASRSFAAEFNALRNIRHRNLIKIITICSSI 540 (746)
Q Consensus 474 ~~~~~~~~~~~~~~ig~g~~g~v~~------------vavK~~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~ 540 (746)
+.....++|+..+.||+|+||.||+ ||||++.... ....+.+.+|+.++++++|||||++++++. .
T Consensus 384 ~~~i~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~ 462 (656)
T 2j0j_A 384 DYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-E 462 (656)
T ss_dssp GTBCCGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-S
T ss_pred ccccccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-c
Confidence 3334456788899999999999996 7888876432 334567999999999999999999999985 4
Q ss_pred CcccchhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccc
Q 041467 541 DFEGFDFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAK 614 (746)
Q Consensus 541 ~~~~lv~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~ 614 (746)
+..++||||+++|+|. ...+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+|||+|+
T Consensus 463 ~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~a~ 539 (656)
T 2j0j_A 463 NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSR 539 (656)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCCCC
T ss_pred CceEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCCCe
Confidence 6689999999999986 23689999999999999999999999 99999999999999999999999999998
Q ss_pred cccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-cc-c----------cchhhc-
Q 041467 615 FLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-KQ-N----------KSILKS- 681 (746)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-~~-~----------~~i~~~- 681 (746)
....... .......||+.|||||++.+..++.+ +|||||||++|.... .. . ..+...
T Consensus 540 ~~~~~~~-------~~~~~~~~t~~y~aPE~~~~~~~~~~---~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~~~ 609 (656)
T 2j0j_A 540 YMEDSTY-------YKASKGKLPIKWMAPESINFRRFTSA---SDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE 609 (656)
T ss_dssp SCCC-----------------CCGGGCCHHHHHHCCCCHH---HHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHHTC
T ss_pred ecCCCcc-------eeccCCCCCcceeCHHHhcCCCCCch---hhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCC
Confidence 7633211 11223457889999999988776554 999999999983211 10 0 011110
Q ss_pred cccCCCccHHHHHHhhCCCCCCCCC-CCCccchhhhcc
Q 041467 682 AGIKGKKTVSFFLSLLSPSCSVFPL-TPSSNSFTLLGL 718 (746)
Q Consensus 682 ~~~~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~~~~~ 718 (746)
.......+.+.+..++..|+...|. ||+..++...+.
T Consensus 610 ~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~ 647 (656)
T 2j0j_A 610 RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLS 647 (656)
T ss_dssp CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHH
T ss_pred CCCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHH
Confidence 1111223344555555556666666 777776654433
No 272
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=99.97 E-value=3.5e-31 Score=275.93 Aligned_cols=176 Identities=18% Similarity=0.220 Sum_probs=135.0
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccch
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
..++|+..+.||+|+||.||+ ||||++.... ....+.+.+|...++.++||||+++++++.+.+..++|
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv 84 (290)
T 3fme_A 5 KADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWIC 84 (290)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEE
T ss_pred cHHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEE
Confidence 356899999999999999997 8999886542 22233455666678999999999999999999999999
Q ss_pred hhhccCCccc---------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccccccccc
Q 041467 547 FKAISNGQLR---------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617 (746)
Q Consensus 547 ~e~~~~g~l~---------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~ 617 (746)
|||+++ ++. ...+++..+..++.|++.|++|||+++ +|+||||||+||+++.++.+||+|||+++...
T Consensus 85 ~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 161 (290)
T 3fme_A 85 MELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLV 161 (290)
T ss_dssp EECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC-------
T ss_pred Eehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecCCccccc
Confidence 999975 442 357899999999999999999999853 89999999999999999999999999998753
Q ss_pred CCCCCCCccccccccccccccccccccccc----ccccccCCCccceeeccceee
Q 041467 618 GYEPGTTAETASSSIGINGTVGYVAPVIIA----ARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~----~~~~~~~~~~~DiwSlG~i~~ 668 (746)
... ......||+.|+|||++. +..+ +.++||||+||++|
T Consensus 162 ~~~---------~~~~~~~t~~y~aPE~~~~~~~~~~~---~~~~Di~slG~il~ 204 (290)
T 3fme_A 162 DDV---------AKDIDAGCKPYMAPERINPELNQKGY---SVKSDIWSLGITMI 204 (290)
T ss_dssp -----------------CCCCCCSCHHHHSCCTTC--C---CHHHHHHHHHHHHH
T ss_pred ccc---------cccccCCCccccChhhcChhhcCcCC---CcHHHHHHHHHHHH
Confidence 321 122346899999999973 3334 44599999999998
No 273
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=99.97 E-value=1.9e-31 Score=284.83 Aligned_cols=180 Identities=17% Similarity=0.241 Sum_probs=145.6
Q ss_pred hhhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh-hhhhHHHHHHHHH-hhcCCCCceeeEEEEEecCCcccc
Q 041467 477 KATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ-KEASRSFAAEFNA-LRNIRHRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 477 ~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~-~~~~~~~~~E~~~-l~~l~HpnIv~l~~~~~~~~~~~l 545 (746)
...++|+..+.||+|+||.||+ ||||++.... ....+++.+|+.+ ++.++||||+++++++...+..++
T Consensus 48 ~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~l 127 (340)
T 3an0_A 48 VKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWI 127 (340)
T ss_dssp CCSSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEE
T ss_pred EehhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEE
Confidence 3456788999999999999997 8999986432 2234455566655 788999999999999999999999
Q ss_pred hhhhccCCccc---------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccc
Q 041467 546 DFKAISNGQLR---------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFL 616 (746)
Q Consensus 546 v~e~~~~g~l~---------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~ 616 (746)
||||+.+ ++. ...+++..+..++.||+.||+|||+.. +|+||||||+||+++.++.+||+|||+++..
T Consensus 128 v~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 204 (340)
T 3an0_A 128 CMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYL 204 (340)
T ss_dssp EECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCSCCSTTEEECSTTCEEECCCSHHHHH
T ss_pred EHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeCCCceec
Confidence 9999975 553 357899999999999999999999743 8999999999999999999999999999876
Q ss_pred cCCCCCCCccccccccccccccccccccccccc-ccccCCCccceeeccceee
Q 041467 617 YGYEPGTTAETASSSIGINGTVGYVAPVIIAAR-NLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-~~~~~~~~~DiwSlG~i~~ 668 (746)
... .......||+.|+|||++.+. ....++.++|||||||++|
T Consensus 205 ~~~---------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~ 248 (340)
T 3an0_A 205 VDS---------VAKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMI 248 (340)
T ss_dssp SCH---------HHHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHH
T ss_pred ccc---------cccccCCCCccccCccccccccccCCCCchhhHHHHHHHHH
Confidence 321 112235799999999997543 1112345699999999998
No 274
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=99.97 E-value=8.5e-32 Score=283.83 Aligned_cols=224 Identities=19% Similarity=0.192 Sum_probs=158.9
Q ss_pred hhhhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhh------hhhHHHHHHHHHhhcC----CCCceeeEEEE
Q 041467 476 SKATNNFSPANKIREGGFNIVYN---------VAMKVANLKQK------EASRSFAAEFNALRNI----RHRNLIKIITI 536 (746)
Q Consensus 476 ~~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~------~~~~~~~~E~~~l~~l----~HpnIv~l~~~ 536 (746)
....++|+..+.||+|+||.||+ ||||++..... .....+.+|+++++++ +||||++++++
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~ 106 (312)
T 2iwi_A 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW 106 (312)
T ss_dssp ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence 44567899999999999999997 89999864422 1223466899999998 89999999999
Q ss_pred EecCCcccchhhh-ccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeC-CCCcEEEcc
Q 041467 537 CSSIDFEGFDFKA-ISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLD-QDVVTHVGD 609 (746)
Q Consensus 537 ~~~~~~~~lv~e~-~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~-~~~~~ki~D 609 (746)
+...+..++|||+ +.++++. ...+++.++..++.|++.||+|||+. +|+||||||+||+++ .++.+||+|
T Consensus 107 ~~~~~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl~d 183 (312)
T 2iwi_A 107 FETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGCAKLID 183 (312)
T ss_dssp C-----CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTEEEECC
T ss_pred EecCCeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCeEEEEE
Confidence 9999999999999 6788875 45689999999999999999999999 999999999999999 889999999
Q ss_pred ccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-----ccccchhhcccc
Q 041467 610 LGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-----KQNKSILKSAGI 684 (746)
Q Consensus 610 fGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-----~~~~~i~~~~~~ 684 (746)
||+++..... ......||..|+|||++.+..+.. .++||||+||++|.... .....+......
T Consensus 184 fg~~~~~~~~----------~~~~~~~~~~y~aPE~~~~~~~~~--~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~ 251 (312)
T 2iwi_A 184 FGSGALLHDE----------PYTDFDGTRVYSPPEWISRHQYHA--LPATVWSLGILLYDMVCGDIPFERDQEILEAELH 251 (312)
T ss_dssp CSSCEECCSS----------CBCCCCSCTTTSCHHHHHHSCBCH--HHHHHHHHHHHHHHHHHSSCSCCSHHHHHHTCCC
T ss_pred cchhhhcccC----------cccccCCcccccCceeeecCCCCC--ccchHHHHHHHHHHHHHCCCCCCChHHHhhhccC
Confidence 9999876322 122366899999999998766533 25999999999982211 111122222111
Q ss_pred CCCccHHHHHHhhCCCCCCCCC-CCCccchh
Q 041467 685 KGKKTVSFFLSLLSPSCSVFPL-TPSSNSFT 714 (746)
Q Consensus 685 ~~~~~~~~~~~~~~~~~~~~p~-~p~~~~~~ 714 (746)
......+.+..++..|+...|. ||+..++.
T Consensus 252 ~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l 282 (312)
T 2iwi_A 252 FPAHVSPDCCALIRRCLAPKPSSRPSLEEIL 282 (312)
T ss_dssp CCTTSCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred CcccCCHHHHHHHHHHccCChhhCcCHHHHh
Confidence 1123333444444444445555 77776554
No 275
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=99.97 E-value=1.9e-31 Score=283.02 Aligned_cols=188 Identities=20% Similarity=0.256 Sum_probs=147.6
Q ss_pred cccHHHHhhhhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcC-CCCceeeEEEEEe
Q 041467 469 MISHAELSKATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNI-RHRNLIKIITICS 538 (746)
Q Consensus 469 ~~~~~~~~~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~ 538 (746)
.++..++....++|+..+.||+|+||.||+ ||||++.... ...+.+.+|+++++++ +||||+++++++.
T Consensus 13 ~~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~ 91 (326)
T 2x7f_A 13 EIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFI 91 (326)
T ss_dssp ---CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEE
T ss_pred hccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEe
Confidence 344555666788999999999999999997 8999886432 3346789999999999 7999999999998
Q ss_pred c------CCcccchhhhccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcE
Q 041467 539 S------IDFEGFDFKAISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVT 605 (746)
Q Consensus 539 ~------~~~~~lv~e~~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ 605 (746)
. .+..++||||+++|+|. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+
T Consensus 92 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~ 168 (326)
T 2x7f_A 92 KKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEV 168 (326)
T ss_dssp ECC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCE
T ss_pred eccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCE
Confidence 7 45789999999999885 24689999999999999999999999 99999999999999999999
Q ss_pred EEccccccccccCCCCCCCcccccccccccccccccccccccccc--cccCCCccceeeccceee
Q 041467 606 HVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARN--LENREKRHTVMSFPQRFA 668 (746)
Q Consensus 606 ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~--~~~~~~~~DiwSlG~i~~ 668 (746)
||+|||++....... .......||+.|+|||++.... ...++.++|||||||++|
T Consensus 169 kl~Dfg~~~~~~~~~--------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~ 225 (326)
T 2x7f_A 169 KLVDFGVSAQLDRTV--------GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAI 225 (326)
T ss_dssp EECCCTTTC---------------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHH
T ss_pred EEeeCcCceecCcCc--------cccccccCCccccChhhhccccccCcCCCccchHHHHHHHHH
Confidence 999999998653211 1122357899999999997321 112345699999999998
No 276
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=99.96 E-value=8.2e-32 Score=284.96 Aligned_cols=224 Identities=17% Similarity=0.183 Sum_probs=167.1
Q ss_pred hhhhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhh------hhHHHHHHHHHhhcCC--CCceeeEEEEEe
Q 041467 476 SKATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKE------ASRSFAAEFNALRNIR--HRNLIKIITICS 538 (746)
Q Consensus 476 ~~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~------~~~~~~~E~~~l~~l~--HpnIv~l~~~~~ 538 (746)
....++|+..+.||+|+||.||+ ||||++...... ..+.+.+|+.++++++ ||||+++++++.
T Consensus 39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~ 118 (320)
T 3a99_A 39 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE 118 (320)
T ss_dssp -CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE
T ss_pred CCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEe
Confidence 34567899999999999999997 899998654321 2345778999999996 599999999999
Q ss_pred cCCcccchhhhccC-Cccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeC-CCCcEEEcccc
Q 041467 539 SIDFEGFDFKAISN-GQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLD-QDVVTHVGDLG 611 (746)
Q Consensus 539 ~~~~~~lv~e~~~~-g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~-~~~~~ki~DfG 611 (746)
..+..++|||++.. +++. ...+++..+..++.|++.||+|||+. +|+||||||+||+++ +++.+||+|||
T Consensus 119 ~~~~~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~kL~Dfg 195 (320)
T 3a99_A 119 RPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFG 195 (320)
T ss_dssp CSSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCT
T ss_pred cCCcEEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEEEeeCc
Confidence 99999999999975 6664 45789999999999999999999999 999999999999999 78999999999
Q ss_pred ccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceeecccc-----ccccchhhccccCC
Q 041467 612 LAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFALNEK-----KQNKSILKSAGIKG 686 (746)
Q Consensus 612 la~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~~~~~-----~~~~~i~~~~~~~~ 686 (746)
+++..... ......||+.|+|||++.+..+. +.++|||||||++|.... .....+........
T Consensus 196 ~~~~~~~~----------~~~~~~gt~~y~aPE~~~~~~~~--~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~ 263 (320)
T 3a99_A 196 SGALLKDT----------VYTDFDGTRVYSPPEWIRYHRYH--GRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFR 263 (320)
T ss_dssp TCEECCSS----------CBCCCCSCGGGSCHHHHHHSCBC--HHHHHHHHHHHHHHHHHHSSCSCCSHHHHHHCCCCCS
T ss_pred cccccccc----------cccCCCCCccCCChHHhccCCCC--CccchHHhHHHHHHHHHHCCCCCCChhhhhccccccc
Confidence 99876321 12236799999999999877653 235999999999982211 11112222111122
Q ss_pred CccHHHHHHhhCCCCCCCCC-CCCccchh
Q 041467 687 KKTVSFFLSLLSPSCSVFPL-TPSSNSFT 714 (746)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~p~-~p~~~~~~ 714 (746)
....+.+..++..|+...|. ||+..++.
T Consensus 264 ~~~~~~~~~li~~~l~~dp~~Rps~~~ll 292 (320)
T 3a99_A 264 QRVSSECQHLIRWCLALRPSDRPTFEEIQ 292 (320)
T ss_dssp SCCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred ccCCHHHHHHHHHHccCChhhCcCHHHHh
Confidence 23334444444444555555 77766544
No 277
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.96 E-value=1e-31 Score=299.37 Aligned_cols=340 Identities=19% Similarity=0.194 Sum_probs=243.2
Q ss_pred ccccEEecccCcCcccCchh-hhCCccCcEEecccCcCCc----cCCccccCCCCCCeeeCcCCCCCCccchhh-cCCC-
Q 041467 18 TFLRYINLVNNGFNGEIPHQ-IGRLISLERLILSNNSFSC----AIPANLSSGSNLIKLSTDSNNLVRDILTEI-CSLF- 90 (746)
Q Consensus 18 ~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~-~~l~- 90 (746)
++|++|||++|+++...... +..+++|++|+|++|.++. .++..+..+++|++|+|++|.+....+..+ ..+.
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 56888999888887543333 7788889999999988874 356677888889999998888765444433 3355
Q ss_pred ---CCCEEEccCCCCc--------CcccCCCCCCEEeccCCCccc----------ccCCCCCcEeeCccCcccccC----
Q 041467 91 ---KLERLRIDCGGRI--------DSLGHLKSLLLLSLAFNQFLS----------LSNASSLEMIEFSRNQFSGGV---- 145 (746)
Q Consensus 91 ---~L~~L~l~~~~~~--------~~~~~l~~L~~L~Ls~N~l~~----------l~~l~~L~~L~Ls~N~l~~~~---- 145 (746)
+|++|+++++... ..+..+++|+.|+|++|.+.. ....++|++|+|++|++++..
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l 162 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPL 162 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHH
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHH
Confidence 6888888876533 346788889999999888842 123567899999999888643
Q ss_pred CccccCCCCCCEEEccCCCCCCCCCCCcccccccc-----CCCCCCEEEccccccccc----CChhhhhcccccceEEcc
Q 041467 146 SVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLT-----NCSKLERLYFNRNGFEGV----LPHSIANLSSTIKQIAMG 216 (746)
Q Consensus 146 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~-----~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~~L~~L~l~ 216 (746)
+..+..+++|++|+|++|.++. ..+..+. ..++|++|++++|.+++. ++..+..++ +|+.|+++
T Consensus 163 ~~~l~~~~~L~~L~L~~n~i~~------~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~-~L~~L~Ls 235 (461)
T 1z7x_W 163 ASVLRAKPDFKELTVSNNDINE------AGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKA-SLRELALG 235 (461)
T ss_dssp HHHHHHCTTCCEEECCSSBCHH------HHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCT-TCCEEECC
T ss_pred HHHHhhCCCCCEEECcCCCcch------HHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCC-CccEEecc
Confidence 5556677889999999888754 1122222 356888999999988753 466677776 68899999
Q ss_pred cCcccccC-----CccccCCCCCCeeecccccceec----CCcCCCCCCCCceeecccccccccccccc--------ccc
Q 041467 217 SNRISSTI-----PHGIRNLVNLNWLTMESSQLIGT----IPPLIGETPNLQLLNIGGNHLQGSILSSL--------GNL 279 (746)
Q Consensus 217 ~N~i~~~~-----p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l--------~~l 279 (746)
+|++++.. +..+..+++|++|++++|++++. ++..+..+++|++|+|++|.+.+..+..+ .+|
T Consensus 236 ~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L 315 (461)
T 1z7x_W 236 SNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQL 315 (461)
T ss_dssp SSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCC
T ss_pred CCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccc
Confidence 98887532 33344678899999998888754 56667778889999999998875433222 356
Q ss_pred ChHHhhhccCCCC----CCccccCCCCCCeeeecCCcCccccchhhhh-----cccccceEEccCccccc----cCchhh
Q 041467 280 TLQTYLFNNLQGN----IPSSLANCKSLLGLSVSHNKLTSTLPQQILS-----VTTLSLYLELDNNLLNG----SLPPEV 346 (746)
Q Consensus 280 ~~l~~l~n~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-----l~~l~~~L~Ls~N~l~~----~~p~~~ 346 (746)
+.|++.+|.+++. +|..+..+++|++|++++|++++..+..+.. .+.+ +.|++++|.+++ .+|..+
T Consensus 316 ~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L-~~L~L~~n~i~~~~~~~l~~~l 394 (461)
T 1z7x_W 316 ESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVL-RVLWLADCDVSDSSCSSLAATL 394 (461)
T ss_dssp CEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCC-CEEECTTSCCCHHHHHHHHHHH
T ss_pred eeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCce-EEEECCCCCCChhhHHHHHHHH
Confidence 6666667777654 4666777888888888888887655555553 4566 578888888875 566666
Q ss_pred hcccCCceeecCCCCCCCCCCCEEEccCCcCccc
Q 041467 347 GNLKNLLRLHIPEYPENLSFFELLNLSYNYFGSE 380 (746)
Q Consensus 347 ~~l~~L~~L~lp~~~~~l~~L~~L~ls~N~l~~~ 380 (746)
.. ++.|+.||+++|++++.
T Consensus 395 ~~---------------~~~L~~L~l~~N~i~~~ 413 (461)
T 1z7x_W 395 LA---------------NHSLRELDLSNNCLGDA 413 (461)
T ss_dssp HH---------------CCCCCEEECCSSSCCHH
T ss_pred Hh---------------CCCccEEECCCCCCCHH
Confidence 54 34567788888888654
No 278
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=99.96 E-value=1.2e-31 Score=294.85 Aligned_cols=179 Identities=23% Similarity=0.274 Sum_probs=137.8
Q ss_pred hhcCCCCCCeEeecCCeeEEE--------EEeehhhhhhhhhhHHHHHHHHHhhcC-CCCceeeEEEEEecCCcccchhh
Q 041467 478 ATNNFSPANKIREGGFNIVYN--------VAMKVANLKQKEASRSFAAEFNALRNI-RHRNLIKIITICSSIDFEGFDFK 548 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~--------vavK~~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~~~~~~lv~e 548 (746)
...+|...+.||+|+||.||. ||||++.... ...+.+|+++++++ +|||||++++++.+....++|||
T Consensus 22 ~~~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E 98 (432)
T 3p23_A 22 GKISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPEC---FSFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIE 98 (432)
T ss_dssp TTEEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTT---EEECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccEEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEE
Confidence 345688899999999999653 9999885432 22367899999999 79999999999999999999999
Q ss_pred hccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCC-----CCcEEEcccccccccc
Q 041467 549 AISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQ-----DVVTHVGDLGLAKFLY 617 (746)
Q Consensus 549 ~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~-----~~~~ki~DfGla~~~~ 617 (746)
|+. |++. .....+.++..++.||+.||+|||+. +|+||||||+||+++. ..++||+|||+|+...
T Consensus 99 ~~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~ 174 (432)
T 3p23_A 99 LCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLA 174 (432)
T ss_dssp CCS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-
T ss_pred CCC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccceeecc
Confidence 996 4654 22355667789999999999999999 9999999999999942 3468899999998764
Q ss_pred CCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 618 GYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
..... .......+||++|+|||++.+.....++.++||||+||++|
T Consensus 175 ~~~~~-----~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ 220 (432)
T 3p23_A 175 VGRHS-----FSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFY 220 (432)
T ss_dssp ----------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHH
T ss_pred CCCcc-----eeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHH
Confidence 32211 12233477999999999998644344455799999999998
No 279
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=99.96 E-value=4e-31 Score=280.45 Aligned_cols=177 Identities=22% Similarity=0.370 Sum_probs=146.4
Q ss_pred hhhhcCCCCCCeEeecCCeeEEE----------EEeehhhhhh--hhhhHHHHHHHHHhhcC---CCCceeeEEEEEe--
Q 041467 476 SKATNNFSPANKIREGGFNIVYN----------VAMKVANLKQ--KEASRSFAAEFNALRNI---RHRNLIKIITICS-- 538 (746)
Q Consensus 476 ~~~~~~~~~~~~ig~g~~g~v~~----------vavK~~~~~~--~~~~~~~~~E~~~l~~l---~HpnIv~l~~~~~-- 538 (746)
....++|+..+.||+|+||.||+ ||||++.... ......+.+|+++++.+ +||||+++++++.
T Consensus 7 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~ 86 (326)
T 1blx_A 7 CRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVS 86 (326)
T ss_dssp CCGGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEE
T ss_pred cCchhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeec
Confidence 34567899999999999999996 8999886432 12233567788877766 8999999999987
Q ss_pred ---cCCcccchhhhccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEc
Q 041467 539 ---SIDFEGFDFKAISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVG 608 (746)
Q Consensus 539 ---~~~~~~lv~e~~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~ 608 (746)
.....++||||+. |++. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl~ 162 (326)
T 1blx_A 87 RTDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLA 162 (326)
T ss_dssp ECSSEEEEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEEC
T ss_pred ccCCCceEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEEe
Confidence 4557899999998 5664 23489999999999999999999999 99999999999999999999999
Q ss_pred cccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 609 DLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 609 DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
|||+++.... ........||+.|+|||++.+..++. ++||||+||++|
T Consensus 163 Dfg~~~~~~~---------~~~~~~~~~~~~y~aPE~~~~~~~~~---~~Di~slG~il~ 210 (326)
T 1blx_A 163 DFGLARIYSF---------QMALTSVVVTLWYRAPEVLLQSSYAT---PVDLWSVGCIFA 210 (326)
T ss_dssp SCCSCCCCCG---------GGGGCCCCCCCTTCCHHHHTTCCCCT---HHHHHHHHHHHH
T ss_pred cCcccccccC---------CCCccccccccceeCHHHHhcCCCCc---chhHHHHHHHHH
Confidence 9999976521 11223467899999999998877654 599999999998
No 280
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=99.96 E-value=4.3e-31 Score=293.19 Aligned_cols=180 Identities=22% Similarity=0.272 Sum_probs=148.0
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCC-CceeeEEEEEecCCcccchhh
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRH-RNLIKIITICSSIDFEGFDFK 548 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~H-pnIv~l~~~~~~~~~~~lv~e 548 (746)
.++|+..+.||+|+||.||+ ||||++..... ...+.+|+++++.++| ++|+.+..++...+..++|||
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme 83 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD 83 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence 46899999999999999997 89998754322 2358899999999987 566666677777788899999
Q ss_pred hccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeee---CCCCcEEEccccccccccCC
Q 041467 549 AISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL---DQDVVTHVGDLGLAKFLYGY 619 (746)
Q Consensus 549 ~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl---~~~~~~ki~DfGla~~~~~~ 619 (746)
|+ +|+|. ...+++.++..++.||+.||+|||+. +||||||||+|||+ +.++.+||+|||+|+.+...
T Consensus 84 ~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~ 159 (483)
T 3sv0_A 84 LL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDT 159 (483)
T ss_dssp CC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred CC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcceeccCC
Confidence 99 88875 45799999999999999999999999 99999999999999 58899999999999876543
Q ss_pred CCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 620 EPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 620 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
..... ..........||+.|+|||++.+..++.+ +|||||||++|
T Consensus 160 ~~~~~-~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~---sDvwSlGvil~ 204 (483)
T 3sv0_A 160 STHQH-IPYRENKNLTGTARYASVNTHLGIEQSRR---DDLESLGYVLM 204 (483)
T ss_dssp TTCCB-CCCCCCCCCCSCTTTCCHHHHTTCCCCHH---HHHHHHHHHHH
T ss_pred ccccc-cccccccccCCCccccCHHHhcCCCCChH---HHHHHHHHHHH
Confidence 32111 01112235789999999999998877655 99999999998
No 281
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=99.96 E-value=9e-32 Score=288.66 Aligned_cols=177 Identities=14% Similarity=0.161 Sum_probs=146.5
Q ss_pred hcCCCCCCeEeecCCeeEEE-----------------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceee---------
Q 041467 479 TNNFSPANKIREGGFNIVYN-----------------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIK--------- 532 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~-----------------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~--------- 532 (746)
.++|+..+.||+|+||.||+ ||||++... +.+.+|++++++++|||||+
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 115 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTP 115 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence 36899999999999999996 577776432 45889999999999999998
Q ss_pred ------EEEEEec-CCcccchhhhccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCee
Q 041467 533 ------IITICSS-IDFEGFDFKAISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNIL 598 (746)
Q Consensus 533 ------l~~~~~~-~~~~~lv~e~~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NIL 598 (746)
+++++.. ....++||||+ +|+|. ...+++.++..++.||+.||+|||+. +|+||||||+||+
T Consensus 116 ~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIl 191 (352)
T 2jii_A 116 LLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAENIF 191 (352)
T ss_dssp TCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGGGEE
T ss_pred ccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEE
Confidence 6677766 66889999999 88886 25799999999999999999999999 9999999999999
Q ss_pred eCCCC--cEEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 599 LDQDV--VTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 599 l~~~~--~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
++.++ .+||+|||+|+.+........ ..........||+.|+|||++.+..++.+ +|||||||++|
T Consensus 192 ~~~~~~~~~kl~Dfg~a~~~~~~~~~~~-~~~~~~~~~~gt~~y~aPE~~~~~~~~~~---~Di~slG~il~ 259 (352)
T 2jii_A 192 VDPEDQSQVTLAGYGFAFRYCPSGKHVA-YVEGSRSPHEGDLEFISMDLHKGCGPSRR---SDLQSLGYCML 259 (352)
T ss_dssp EETTEEEEEEECCGGGCBCSSGGGCCCC-CCTTSSCTTCSCTTTCCHHHHTTCCCCHH---HHHHHHHHHHH
T ss_pred EcCCCCceEEEecCcceeeccCCCcccc-ccccccccccCCccccCHHHHccCCCCch---hhHHHHHHHHH
Confidence 99988 999999999987643322111 01112234689999999999988776554 99999999998
No 282
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=99.96 E-value=1.2e-30 Score=271.57 Aligned_cols=176 Identities=24% Similarity=0.327 Sum_probs=150.0
Q ss_pred hhhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccc
Q 041467 477 KATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 477 ~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~l 545 (746)
...++|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++||||+++++++...+..++
T Consensus 19 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 98 (287)
T 2wei_A 19 TFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYI 98 (287)
T ss_dssp HHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEE
T ss_pred HHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEE
Confidence 3456899999999999999997 8999986543 2345679999999999999999999999999999999
Q ss_pred hhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCC---CCcEEEcccccccccc
Q 041467 546 DFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQ---DVVTHVGDLGLAKFLY 617 (746)
Q Consensus 546 v~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~---~~~~ki~DfGla~~~~ 617 (746)
||||++++++. ...+++.++..++.|++.|++|||+. +|+||||||+||+++. ++.+||+|||+++...
T Consensus 99 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~ 175 (287)
T 2wei_A 99 VGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQ 175 (287)
T ss_dssp EECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBC
T ss_pred EEEccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCcceeec
Confidence 99999999885 45789999999999999999999999 9999999999999975 4479999999998753
Q ss_pred CCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 618 GYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
... ......||+.|+|||++.+. + +.++||||+||++|
T Consensus 176 ~~~---------~~~~~~~~~~y~aPE~~~~~-~---~~~~Di~slG~~l~ 213 (287)
T 2wei_A 176 QNT---------KMKDRIGTAYYIAPEVLRGT-Y---DEKCDVWSAGVILY 213 (287)
T ss_dssp CCS---------SCSCHHHHHTTCCHHHHTTC-C---CTHHHHHHHHHHHH
T ss_pred CCC---------ccccccCcccccChHHhcCC-C---CCchhhHhHHHHHH
Confidence 221 12235689999999998764 4 44699999999998
No 283
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=99.96 E-value=6.8e-31 Score=280.04 Aligned_cols=171 Identities=20% Similarity=0.273 Sum_probs=146.2
Q ss_pred hcCCCCCCeEeecCCeeEEE----------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCc------eeeEEEEEecCCc
Q 041467 479 TNNFSPANKIREGGFNIVYN----------VAMKVANLKQKEASRSFAAEFNALRNIRHRN------LIKIITICSSIDF 542 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~----------vavK~~~~~~~~~~~~~~~E~~~l~~l~Hpn------Iv~l~~~~~~~~~ 542 (746)
.++|+..+.||+|+||.||+ ||||++... ....+.+.+|+++++.++|++ |+++++++...+.
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~ 91 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGH 91 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTE
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCc
Confidence 45899999999999999996 899988643 234567889999999998765 9999999999999
Q ss_pred ccchhhhccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCC--------------
Q 041467 543 EGFDFKAISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQ-------------- 601 (746)
Q Consensus 543 ~~lv~e~~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~-------------- 601 (746)
.++||||+ ++++. ...+++.++..++.|++.||+|||++ +|+||||||+||+++.
T Consensus 92 ~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~ 167 (339)
T 1z57_A 92 ICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIKRD 167 (339)
T ss_dssp EEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC----CE
T ss_pred EEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCCccccc
Confidence 99999999 66664 23588999999999999999999999 9999999999999987
Q ss_pred -----CCcEEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 602 -----DVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 602 -----~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
++.+||+|||+++..... .....||+.|+|||++.+..++. ++||||+||++|
T Consensus 168 ~~~~~~~~~kl~Dfg~~~~~~~~-----------~~~~~gt~~y~aPE~~~~~~~~~---~~Di~slG~il~ 225 (339)
T 1z57_A 168 ERTLINPDIKVVDFGSATYDDEH-----------HSTLVSTRHYRAPEVILALGWSQ---PCDVWSIGCILI 225 (339)
T ss_dssp EEEESCCCEEECCCSSCEETTSC-----------CCSSCSCGGGCCHHHHTTSCCCT---HHHHHHHHHHHH
T ss_pred cccccCCCceEeeCcccccCccc-----------cccccCCccccChHHhhCCCCCc---chhhHHHHHHHH
Confidence 678999999999864221 12367899999999998877655 499999999998
No 284
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=99.96 E-value=7.9e-31 Score=278.33 Aligned_cols=180 Identities=18% Similarity=0.211 Sum_probs=127.7
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh-hhhhHHHHHHHH-HhhcCCCCceeeEEEEEecCCcccch
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ-KEASRSFAAEFN-ALRNIRHRNLIKIITICSSIDFEGFD 546 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~-~~~~~~~~~E~~-~l~~l~HpnIv~l~~~~~~~~~~~lv 546 (746)
..++|+..+.||+|+||.||+ ||||++.... ....+.+.+|+. +++.++||||+++++++...+..++|
T Consensus 20 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv 99 (327)
T 3aln_A 20 TAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWIC 99 (327)
T ss_dssp CSCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEE
T ss_pred CHHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEE
Confidence 347889999999999999997 9999986432 233445666665 78889999999999999999999999
Q ss_pred hhhccCCccc---------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEcccccccccc
Q 041467 547 FKAISNGQLR---------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLY 617 (746)
Q Consensus 547 ~e~~~~g~l~---------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~ 617 (746)
|||+.++... ...+++..+..++.|++.|++|||+.. +|+||||||+||+++.++.+||+|||+++...
T Consensus 100 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~--~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~ 177 (327)
T 3aln_A 100 MELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQLV 177 (327)
T ss_dssp ECCCSEEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHH--SCCCSCCCGGGEEEETTTEEEECCCSSSCC--
T ss_pred EeecCCChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccC--CEeECCCCHHHEEEcCCCCEEEccCCCceecc
Confidence 9999864211 356899999999999999999999953 79999999999999999999999999998753
Q ss_pred CCCCCCCcccccccccccccccccccccccccc-cccCCCccceeeccceee
Q 041467 618 GYEPGTTAETASSSIGINGTVGYVAPVIIAARN-LENREKRHTVMSFPQRFA 668 (746)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~-~~~~~~~~DiwSlG~i~~ 668 (746)
... ......||+.|+|||++.... ...++.++|||||||++|
T Consensus 178 ~~~---------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~ 220 (327)
T 3aln_A 178 DSI---------AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLY 220 (327)
T ss_dssp -------------------------------------CCSHHHHHHHHHHHH
T ss_pred ccc---------ccccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHH
Confidence 221 122347999999999994321 112344699999999998
No 285
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=99.96 E-value=3.8e-31 Score=291.61 Aligned_cols=177 Identities=20% Similarity=0.211 Sum_probs=132.5
Q ss_pred CCCCCCeEeecCCeeEEE--------EEeehhhhhhhhhhHHHHHHHHHhhcC-CCCceeeEEEEEecCCcccchhhhcc
Q 041467 481 NFSPANKIREGGFNIVYN--------VAMKVANLKQKEASRSFAAEFNALRNI-RHRNLIKIITICSSIDFEGFDFKAIS 551 (746)
Q Consensus 481 ~~~~~~~ig~g~~g~v~~--------vavK~~~~~~~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~~~~~~lv~e~~~ 551 (746)
.|...+.||+|+||+||. ||||++... ..+.+.+|+++++++ +|||||++++++.+.+..++||||+.
T Consensus 16 ~~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~---~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~ 92 (434)
T 2rio_A 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID---FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN 92 (434)
T ss_dssp CEEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG---GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS
T ss_pred eeeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH---HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC
Confidence 345568899999999974 999988643 234578999999886 89999999999999999999999995
Q ss_pred CCccc----cc--------CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCC-------------CcEE
Q 041467 552 NGQLR----LC--------NLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQD-------------VVTH 606 (746)
Q Consensus 552 ~g~l~----~~--------~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~-------------~~~k 606 (746)
|+|. .. ..++..+..++.||+.||+|||+. +|+||||||+|||++.+ +.+|
T Consensus 93 -gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~k 168 (434)
T 2rio_A 93 -LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRIL 168 (434)
T ss_dssp -EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEE
T ss_pred -CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCceEEE
Confidence 6764 11 113345678999999999999999 99999999999999654 5899
Q ss_pred EccccccccccCCCCCCCcccccccccccccccccccccccccc----cccCCCccceeeccceee
Q 041467 607 VGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARN----LENREKRHTVMSFPQRFA 668 (746)
Q Consensus 607 i~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~----~~~~~~~~DiwSlG~i~~ 668 (746)
|+|||+|+.+...... ........+||+.|+|||++.+.. ...++.++||||+||++|
T Consensus 169 L~DFG~a~~~~~~~~~----~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ 230 (434)
T 2rio_A 169 ISDFGLCKKLDSGQSS----FRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFY 230 (434)
T ss_dssp ECCCTTCEECCC------------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHH
T ss_pred EcccccceecCCCCcc----ceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHH
Confidence 9999999876433211 111223467999999999997621 122355799999999998
No 286
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=99.96 E-value=1.9e-30 Score=281.58 Aligned_cols=176 Identities=22% Similarity=0.226 Sum_probs=145.9
Q ss_pred hhhhcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCC-CC-----ceeeEEEEEecC
Q 041467 476 SKATNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIR-HR-----NLIKIITICSSI 540 (746)
Q Consensus 476 ~~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~-Hp-----nIv~l~~~~~~~ 540 (746)
....++|+..+.||+|+||.||+ ||||++... ....+.+.+|+++++.++ |+ +|+++++++...
T Consensus 50 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~ 128 (382)
T 2vx3_A 50 EKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFR 128 (382)
T ss_dssp CEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEET
T ss_pred CEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccC
Confidence 34567899999999999999997 899998643 233456788999888885 44 499999999999
Q ss_pred CcccchhhhccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeC--CCCcEEEcccc
Q 041467 541 DFEGFDFKAISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLD--QDVVTHVGDLG 611 (746)
Q Consensus 541 ~~~~lv~e~~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~--~~~~~ki~DfG 611 (746)
+..++||||+.+ ++. ...+++..+..++.|++.|++|||++ ..+|+||||||+|||++ .++.+||+|||
T Consensus 129 ~~~~lv~e~~~~-~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG 206 (382)
T 2vx3_A 129 NHLCLVFEMLSY-NLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFG 206 (382)
T ss_dssp TEEEEEEECCCC-BHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCT
T ss_pred CceEEEEecCCC-CHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEecc
Confidence 999999999964 554 24589999999999999999999952 22899999999999994 57889999999
Q ss_pred ccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 612 LAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 612 la~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
+|+..... ....+||+.|+|||++.+..++. ++|||||||++|
T Consensus 207 ~a~~~~~~-----------~~~~~~t~~y~aPE~~~~~~~~~---~~DiwSlG~il~ 249 (382)
T 2vx3_A 207 SSCQLGQR-----------IYQYIQSRFYRSPEVLLGMPYDL---AIDMWSLGCILV 249 (382)
T ss_dssp TCEETTCC-----------CCSSCSCGGGCCHHHHTTCCCCT---HHHHHHHHHHHH
T ss_pred Cceecccc-----------cccccCCccccChHHHcCCCCCc---HHHHHHHHHHHH
Confidence 99875321 22367999999999999887654 599999999998
No 287
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.96 E-value=1.6e-31 Score=284.87 Aligned_cols=169 Identities=15% Similarity=0.130 Sum_probs=140.4
Q ss_pred hcCCCCCCeEeecCCeeEEE-------EEeehhhhhh--------hhhhHHHHHHHHHhhcCC---------CCceeeEE
Q 041467 479 TNNFSPANKIREGGFNIVYN-------VAMKVANLKQ--------KEASRSFAAEFNALRNIR---------HRNLIKII 534 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~-------vavK~~~~~~--------~~~~~~~~~E~~~l~~l~---------HpnIv~l~ 534 (746)
.++|+..+.||+|+||.||+ ||||++.... ....+.+.+|+++++.++ |||||++.
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~ 98 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLN 98 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEETTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEE
T ss_pred cccchheeeecccCceEEEEEEeCCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhc
Confidence 46789999999999999997 8999987542 122367889999998886 77777777
Q ss_pred EEEe-----------------c-------------CCcccchhhhccCCccc----ccCCCHHHHHHHHHHHHHHHHHHH
Q 041467 535 TICS-----------------S-------------IDFEGFDFKAISNGQLR----LCNLSLTQRVNIAIDVAFAIEYLR 580 (746)
Q Consensus 535 ~~~~-----------------~-------------~~~~~lv~e~~~~g~l~----~~~l~~~~~~~i~~~i~~~l~yLH 580 (746)
+++. + .+..++||||+++|++. ...+++.++..++.||+.||+|||
T Consensus 99 ~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~~~~~~~~~~~i~~qi~~aL~~lH 178 (336)
T 2vuw_A 99 SVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAVAE 178 (336)
T ss_dssp EEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence 7643 2 56889999999999653 456899999999999999999999
Q ss_pred -hcCCCCeEEcCCCCCCeeeCCCC--------------------cEEEccccccccccCCCCCCCccccccccccccccc
Q 041467 581 -HHCQPSIVHGDLKPSNILLDQDV--------------------VTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVG 639 (746)
Q Consensus 581 -~~~~~~ivHrDlkp~NILl~~~~--------------------~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~ 639 (746)
+. +|+||||||+|||++.++ .+||+|||+|+.... ...+||+.
T Consensus 179 ~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~-------------~~~~gt~~ 242 (336)
T 2vuw_A 179 ASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD-------------GIVVFCDV 242 (336)
T ss_dssp HHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET-------------TEEECCCC
T ss_pred HhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC-------------CcEEEeec
Confidence 88 999999999999999887 899999999987532 12579999
Q ss_pred ccccccccccccccCCCccceeecccee
Q 041467 640 YVAPVIIAARNLENREKRHTVMSFPQRF 667 (746)
Q Consensus 640 Y~aPE~~~~~~~~~~~~~~DiwSlG~i~ 667 (746)
|||||++.+.. +. ++||||+|++.
T Consensus 243 y~aPE~~~g~~-~~---~~Diwsl~~~~ 266 (336)
T 2vuw_A 243 SMDEDLFTGDG-DY---QFDIYRLMKKE 266 (336)
T ss_dssp TTCSGGGCCCS-SH---HHHHHHHHHHH
T ss_pred ccChhhhcCCC-cc---ceehhhhhCCC
Confidence 99999998765 33 59999998763
No 288
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.96 E-value=1.8e-30 Score=302.49 Aligned_cols=170 Identities=22% Similarity=0.334 Sum_probs=147.0
Q ss_pred hcCCCCCCeEeecCCeeEEE----------EEeehhhhh-hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCc-----
Q 041467 479 TNNFSPANKIREGGFNIVYN----------VAMKVANLK-QKEASRSFAAEFNALRNIRHRNLIKIITICSSIDF----- 542 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~----------vavK~~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~----- 542 (746)
.++|++.+.||+|+||.||+ ||||++... .....+.+.+|++++++++|||||+++++|...+.
T Consensus 79 ~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 158 (681)
T 2pzi_A 79 AGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPV 158 (681)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCce
Confidence 36899999999999999997 899987543 23445678999999999999999999999988665
Q ss_pred ccchhhhccCCccc---ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCC
Q 041467 543 EGFDFKAISNGQLR---LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGY 619 (746)
Q Consensus 543 ~~lv~e~~~~g~l~---~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~ 619 (746)
.|+||||+++++|. ...+++.++..++.||+.||+|||++ +|+||||||+||+++.+ .+||+|||+++.....
T Consensus 159 ~~lv~E~~~g~~L~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~~ 234 (681)
T 2pzi_A 159 GYIVMEYVGGQSLKRSKGQKLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGAVSRINSF 234 (681)
T ss_dssp EEEEEECCCCEECC----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTTCEETTCC
T ss_pred eEEEEEeCCCCcHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEecccchhcccC
Confidence 69999999999987 44789999999999999999999999 99999999999999875 9999999999875321
Q ss_pred CCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 620 EPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 620 ~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
....||+.|||||++.+.. +.++|||||||++|
T Consensus 235 ------------~~~~gt~~y~aPE~~~~~~----~~~sDi~slG~~l~ 267 (681)
T 2pzi_A 235 ------------GYLYGTPGFQAPEIVRTGP----TVATDIYTVGRTLA 267 (681)
T ss_dssp ------------SCCCCCTTTSCTTHHHHCS----CHHHHHHHHHHHHH
T ss_pred ------------CccCCCccccCHHHHcCCC----CCceehhhhHHHHH
Confidence 2367999999999987653 34699999999998
No 289
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=99.96 E-value=2.1e-30 Score=278.22 Aligned_cols=172 Identities=21% Similarity=0.304 Sum_probs=146.4
Q ss_pred hcCCCCCCeEeecCCeeEEE----------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCc------eeeEEEEEecCCc
Q 041467 479 TNNFSPANKIREGGFNIVYN----------VAMKVANLKQKEASRSFAAEFNALRNIRHRN------LIKIITICSSIDF 542 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~----------vavK~~~~~~~~~~~~~~~E~~~l~~l~Hpn------Iv~l~~~~~~~~~ 542 (746)
.++|+..+.||+|+||.||+ ||||++... ....+.+.+|++++++++|++ |+.+++++...+.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 96 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGH 96 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTE
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCe
Confidence 46899999999999999996 899998643 234567889999999998776 9999999999999
Q ss_pred ccchhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeee-----------------
Q 041467 543 EGFDFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILL----------------- 599 (746)
Q Consensus 543 ~~lv~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl----------------- 599 (746)
.++||||+.++.+. ...+++.++..++.||+.||+|||+. +|+||||||+||++
T Consensus 97 ~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~ 173 (355)
T 2eu9_A 97 MCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKSCEE 173 (355)
T ss_dssp EEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECCC-CCCE
T ss_pred EEEEEeccCCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecccccccccccccccc
Confidence 99999999554443 24689999999999999999999999 99999999999999
Q ss_pred --CCCCcEEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 600 --DQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 600 --~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
+.++.+||+|||+++..... .....||+.|+|||++.+..++. ++||||+||++|
T Consensus 174 ~~~~~~~~kl~Dfg~~~~~~~~-----------~~~~~gt~~y~aPE~~~~~~~~~---~~Di~slG~il~ 230 (355)
T 2eu9_A 174 KSVKNTSIRVADFGSATFDHEH-----------HTTIVATRHYRPPEVILELGWAQ---PCDVWSIGCILF 230 (355)
T ss_dssp EEESCCCEEECCCTTCEETTSC-----------CCSSCSCGGGCCHHHHTTCCCCT---HHHHHHHHHHHH
T ss_pred cccCCCcEEEeecCcccccccc-----------ccCCcCCCcccCCeeeecCCCCC---ccchHHHHHHHH
Confidence 56789999999999864221 12367999999999998877655 499999999998
No 290
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=99.96 E-value=1.1e-30 Score=275.55 Aligned_cols=188 Identities=21% Similarity=0.266 Sum_probs=146.7
Q ss_pred ccHHHHhhhhcCCCCCCeEeecCCeeEEE--------EEeehhhhh--hhhhhHHHHHHHHHhhcCC--CCceeeEEEEE
Q 041467 470 ISHAELSKATNNFSPANKIREGGFNIVYN--------VAMKVANLK--QKEASRSFAAEFNALRNIR--HRNLIKIITIC 537 (746)
Q Consensus 470 ~~~~~~~~~~~~~~~~~~ig~g~~g~v~~--------vavK~~~~~--~~~~~~~~~~E~~~l~~l~--HpnIv~l~~~~ 537 (746)
+.+..+....++|+..+.||+|+||.||+ ||||++... .....+.+.+|++++++++ ||||+++++++
T Consensus 18 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~ 97 (313)
T 3cek_A 18 LYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE 97 (313)
T ss_dssp --CCEEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEE
T ss_pred CCeeeeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEe
Confidence 33444455667899999999999999997 899998643 2344567999999999997 49999999999
Q ss_pred ecCCcccchhhhccCCccc-----ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccc
Q 041467 538 SSIDFEGFDFKAISNGQLR-----LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGL 612 (746)
Q Consensus 538 ~~~~~~~lv~e~~~~g~l~-----~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGl 612 (746)
...+..++||| +.+|++. ...+++.++..++.|++.||+|||+. +|+||||||+||++++ +.+||+|||+
T Consensus 98 ~~~~~~~lv~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL~Dfg~ 172 (313)
T 3cek_A 98 ITDQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKLIDFGI 172 (313)
T ss_dssp ECSSEEEEEEC-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEECCCSS
T ss_pred ecCCEEEEEEe-cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEEeeccc
Confidence 99999999999 5677775 45789999999999999999999999 9999999999999964 8999999999
Q ss_pred cccccCCCCCCCccccccccccccccccccccccccccc--------ccCCCccceeeccceee
Q 041467 613 AKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNL--------ENREKRHTVMSFPQRFA 668 (746)
Q Consensus 613 a~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~--------~~~~~~~DiwSlG~i~~ 668 (746)
++........ .......||+.|+|||++.+... ..++.++|||||||++|
T Consensus 173 ~~~~~~~~~~------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~ 230 (313)
T 3cek_A 173 ANQMQPDTTS------VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILY 230 (313)
T ss_dssp SCC--------------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHH
T ss_pred cccccCcccc------ccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHH
Confidence 9876432211 11224579999999999976211 12345699999999998
No 291
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.96 E-value=3.3e-30 Score=292.10 Aligned_cols=176 Identities=24% Similarity=0.384 Sum_probs=147.2
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhh-hhhhhHHHHHHHHHhhcCCCCceeeEEEEEec------CC
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLK-QKEASRSFAAEFNALRNIRHRNLIKIITICSS------ID 541 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~-~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~------~~ 541 (746)
..++|+..+.||+|+||.||+ ||||++... .....+.+.+|++++++++|||||++++++.. .+
T Consensus 12 ~~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~ 91 (676)
T 3qa8_A 12 TCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPND 91 (676)
T ss_dssp -----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTS
T ss_pred CCCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCC
Confidence 347899999999999999996 999998643 23445679999999999999999999999766 56
Q ss_pred cccchhhhccCCccc--------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCc---EEEccc
Q 041467 542 FEGFDFKAISNGQLR--------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVV---THVGDL 610 (746)
Q Consensus 542 ~~~lv~e~~~~g~l~--------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~---~ki~Df 610 (746)
..++||||+++|+|. ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++. +||+||
T Consensus 92 ~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~DF 168 (676)
T 3qa8_A 92 LPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDL 168 (676)
T ss_dssp SCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECSC
T ss_pred eEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEccc
Confidence 789999999999986 12589999999999999999999999 9999999999999986664 999999
Q ss_pred cccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 611 GLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 611 Gla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
|+++...... ......||+.|+|||++.+..++.+ +||||+||++|
T Consensus 169 G~a~~~~~~~---------~~~~~~gt~~Y~APE~l~~~~~s~k---sDIwSLGviLy 214 (676)
T 3qa8_A 169 GYAKELDQGE---------LCTEFVGTLQYLAPELLEQKKYTVT---VDYWSFGTLAF 214 (676)
T ss_dssp CCCCBTTSCC---------CCCCCCSCCTTCSSCSSCCSCCSTT---HHHHHHHHHHH
T ss_pred cccccccccc---------ccccccCCcccCChHHhccCCCCch---hHHHHHHHHHH
Confidence 9998763321 1234679999999999988777554 99999999998
No 292
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=99.96 E-value=3.2e-30 Score=278.90 Aligned_cols=172 Identities=19% Similarity=0.303 Sum_probs=144.2
Q ss_pred hcCCCCCCeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCC-----------CCceeeEEEEEe
Q 041467 479 TNNFSPANKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIR-----------HRNLIKIITICS 538 (746)
Q Consensus 479 ~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------HpnIv~l~~~~~ 538 (746)
.++|+..+.||+|+||.||+ ||||++... ....+.+.+|++++++++ ||||+++++++.
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 46799999999999999997 899998643 233456889999999887 899999999998
Q ss_pred cCC----cccchhhhccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeC------C
Q 041467 539 SID----FEGFDFKAISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLD------Q 601 (746)
Q Consensus 539 ~~~----~~~lv~e~~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~------~ 601 (746)
..+ ..++|||++ +|++. ...+++..+..++.||+.||+|||+++ +|+||||||+||+++ .
T Consensus 97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~~~~~ 173 (373)
T 1q8y_A 97 HKGPNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSPEN 173 (373)
T ss_dssp EEETTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEETTTT
T ss_pred ccCCCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccCCCcC
Confidence 754 688999999 77764 245899999999999999999999954 899999999999994 4
Q ss_pred CCcEEEccccccccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 602 DVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 602 ~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
.+.+||+|||+|+..... .....||+.|+|||++.+..++. ++|||||||++|
T Consensus 174 ~~~~kl~Dfg~a~~~~~~-----------~~~~~~t~~y~aPE~~~~~~~~~---~~Di~slG~il~ 226 (373)
T 1q8y_A 174 LIQIKIADLGNACWYDEH-----------YTNSIQTREYRSPEVLLGAPWGC---GADIWSTACLIF 226 (373)
T ss_dssp EEEEEECCCTTCEETTBC-----------CCSCCSCGGGCCHHHHHTCCCCT---HHHHHHHHHHHH
T ss_pred cceEEEcccccccccCCC-----------CCCCCCCccccCcHHHhCCCCCc---hHhHHHHHHHHH
Confidence 458999999999875321 12357899999999999887654 599999999998
No 293
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=99.96 E-value=7.1e-30 Score=269.76 Aligned_cols=179 Identities=18% Similarity=0.237 Sum_probs=130.6
Q ss_pred hhhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccc
Q 041467 477 KATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGF 545 (746)
Q Consensus 477 ~~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~l 545 (746)
...++|+..+.||+|+||.||+ ||||++.... ....+.+.++..+++.++||||+++++++...+..++
T Consensus 22 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~l 101 (318)
T 2dyl_A 22 AEINDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFI 101 (318)
T ss_dssp CCGGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhhccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEE
Confidence 3456788999999999999997 8999986442 2223345556667888999999999999999999999
Q ss_pred hhhhccCCccc------ccCCCHHHHHHHHHHHHHHHHHHHh-cCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccC
Q 041467 546 DFKAISNGQLR------LCNLSLTQRVNIAIDVAFAIEYLRH-HCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYG 618 (746)
Q Consensus 546 v~e~~~~g~l~------~~~l~~~~~~~i~~~i~~~l~yLH~-~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~ 618 (746)
||||+ ++.+. ...+++..+..++.|++.|++|||+ . +|+||||||+||+++.++.+||+|||+++....
T Consensus 102 v~e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~ 177 (318)
T 2dyl_A 102 AMELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDFGISGRLVD 177 (318)
T ss_dssp EECCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCCTTC-----
T ss_pred EEecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEECCCchhccC
Confidence 99999 33332 3578999999999999999999998 5 899999999999999999999999999976532
Q ss_pred CCCCCCcccccccccccccccccccccccccc--cccCCCccceeeccceee
Q 041467 619 YEPGTTAETASSSIGINGTVGYVAPVIIAARN--LENREKRHTVMSFPQRFA 668 (746)
Q Consensus 619 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~--~~~~~~~~DiwSlG~i~~ 668 (746)
.. ......||+.|+|||++.... ...++.++||||+||++|
T Consensus 178 ~~---------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~ 220 (318)
T 2dyl_A 178 DK---------AKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLV 220 (318)
T ss_dssp ------------------CCTTCCHHHHC--------CCTHHHHHHHHHHHH
T ss_pred Cc---------cccccCCCccccChhhcccccccccCCccccchhhHHHHHH
Confidence 21 122357899999999996321 112345699999999998
No 294
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=99.96 E-value=2.7e-30 Score=275.19 Aligned_cols=171 Identities=19% Similarity=0.234 Sum_probs=123.1
Q ss_pred hhcCCCCC-CeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCceeeEEEEEec----CCcc
Q 041467 478 ATNNFSPA-NKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNALRNIRHRNLIKIITICSS----IDFE 543 (746)
Q Consensus 478 ~~~~~~~~-~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~----~~~~ 543 (746)
..++|... +.||+|+||.||+ ||||++.... +...+....++.++||||+++++++.. ....
T Consensus 26 ~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 101 (336)
T 3fhr_A 26 VTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP----KARQEVDHHWQASGGPHIVCILDVYENMHHGKRCL 101 (336)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSH----HHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred ccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcH----HHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceE
Confidence 45678885 4699999999997 8999985321 112222334667799999999999876 3458
Q ss_pred cchhhhccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCC---CCcEEEcccccc
Q 041467 544 GFDFKAISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQ---DVVTHVGDLGLA 613 (746)
Q Consensus 544 ~lv~e~~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~---~~~~ki~DfGla 613 (746)
++||||+++|+|. ...+++.++..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||++
T Consensus 102 ~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~ 178 (336)
T 3fhr_A 102 LIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGFA 178 (336)
T ss_dssp EEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTC
T ss_pred EEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEeccccc
Confidence 9999999999985 23689999999999999999999999 9999999999999975 456999999999
Q ss_pred ccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 614 KFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
+..... ......||+.|+|||++.+..++.+ +||||+||++|
T Consensus 179 ~~~~~~----------~~~~~~~t~~y~aPE~~~~~~~~~~---~Di~slG~il~ 220 (336)
T 3fhr_A 179 KETTQN----------ALQTPCYTPYYVAPEVLGPEKYDKS---CDMWSLGVIMY 220 (336)
T ss_dssp EEC--------------------------------CHHHHH---HHHHHHHHHHH
T ss_pred eecccc----------ccccCCCCcCccChhhhCCCCCCch---hhHHHHHHHHH
Confidence 865321 1223678999999999987777655 99999999998
No 295
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=3.7e-28 Score=255.17 Aligned_cols=242 Identities=20% Similarity=0.227 Sum_probs=202.4
Q ss_pred cEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCC--ccchhhcCCCCCCEEEcc
Q 041467 21 RYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVR--DILTEICSLFKLERLRID 98 (746)
Q Consensus 21 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~~~~~~~l~~L~~L~l~ 98 (746)
+.++.+++.++ .+|..+. ++|++|+|++|+++...+..|.++++|++|+|++|.+.. ..+..+..+++|++|+++
T Consensus 10 ~~l~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls 86 (306)
T 2z66_A 10 TEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLS 86 (306)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECC
T ss_pred CEEEcCCCCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECC
Confidence 57888888887 6666553 578888888888885444457888888888888888753 236677778888888888
Q ss_pred CCCCc---CcccCCCCCCEEeccCCCcc------cccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCC
Q 041467 99 CGGRI---DSLGHLKSLLLLSLAFNQFL------SLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGT 169 (746)
Q Consensus 99 ~~~~~---~~~~~l~~L~~L~Ls~N~l~------~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~ 169 (746)
++... ..+.++++|+.|++++|++. .+..+++|++|++++|++++..+..|..+++|++|+|++|.+++.
T Consensus 87 ~n~i~~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~- 165 (306)
T 2z66_A 87 FNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQEN- 165 (306)
T ss_dssp SCSEEEEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGG-
T ss_pred CCccccChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccc-
Confidence 76533 45778899999999999884 356788999999999999999999999999999999999998641
Q ss_pred CCCccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCC
Q 041467 170 ANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIP 249 (746)
Q Consensus 170 ~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 249 (746)
..|..+..+++|++|++++|++++..|..+..++ +|+.|++++|++++..+..|..+++|++|+|++|++.+..|
T Consensus 166 ----~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 240 (306)
T 2z66_A 166 ----FLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLS-SLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKK 240 (306)
T ss_dssp ----EECSCCTTCTTCCEEECTTSCCCEECTTTTTTCT-TCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSS
T ss_pred ----cchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCC-CCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCH
Confidence 2566788999999999999999988888898887 79999999999998777789999999999999999999999
Q ss_pred cCCCCCC-CCceeeccccccccc
Q 041467 250 PLIGETP-NLQLLNIGGNHLQGS 271 (746)
Q Consensus 250 ~~~~~l~-~L~~L~Ls~N~l~~~ 271 (746)
..+..++ +|++|+|++|.+++.
T Consensus 241 ~~~~~~~~~L~~L~L~~N~~~~~ 263 (306)
T 2z66_A 241 QELQHFPSSLAFLNLTQNDFACT 263 (306)
T ss_dssp SSCCCCCTTCCEEECTTCCEECS
T ss_pred HHHHhhhccCCEEEccCCCeecc
Confidence 9999985 999999999999853
No 296
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.96 E-value=2e-29 Score=266.09 Aligned_cols=268 Identities=18% Similarity=0.135 Sum_probs=204.2
Q ss_pred ccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEc
Q 041467 18 TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRI 97 (746)
Q Consensus 18 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 97 (746)
..++.++++.+.+...++..+..+++|++|+|++|++++..|..|.++++|++|+|++|.+.+..+
T Consensus 10 ~~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~-------------- 75 (317)
T 3o53_A 10 NRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD-------------- 75 (317)
T ss_dssp TEEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--------------
T ss_pred CceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--------------
Confidence 457888999999876666677788899999999999998777899999999999999998854332
Q ss_pred cCCCCcCcccCCCCCCEEeccCCCcccccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccc
Q 041467 98 DCGGRIDSLGHLKSLLLLSLAFNQFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFIN 177 (746)
Q Consensus 98 ~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~ 177 (746)
+..+++|++|+|++|++..+...++|+.|++++|++++..+.. +++|++|++++|.+++ ..+.
T Consensus 76 --------~~~l~~L~~L~Ls~n~l~~l~~~~~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~------~~~~ 138 (317)
T 3o53_A 76 --------LESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNISRVSCSR---GQGKKNIYLANNKITM------LRDL 138 (317)
T ss_dssp --------ETTCTTCCEEECCSSEEEEEEECTTCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCS------GGGB
T ss_pred --------hhhcCCCCEEECcCCccccccCCCCcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCC------ccch
Confidence 4556777777888888877777788888888888888765543 5778888888888876 3344
Q ss_pred cccCCCCCCEEEcccccccccCChhhh-hcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCC
Q 041467 178 LLTNCSKLERLYFNRNGFEGVLPHSIA-NLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETP 256 (746)
Q Consensus 178 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 256 (746)
.+..+++|++|+|++|.+++..|..+. .+. +|++|++++|+|++. | ....+++|++|+|++|++.+. |..+..++
T Consensus 139 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~-~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~l-~~~~~~l~ 214 (317)
T 3o53_A 139 DEGCRSRVQYLDLKLNEIDTVNFAELAASSD-TLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAFM-GPEFQSAA 214 (317)
T ss_dssp CTGGGSSEEEEECTTSCCCEEEGGGGGGGTT-TCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCEE-CGGGGGGT
T ss_pred hhhccCCCCEEECCCCCCCcccHHHHhhccC-cCCEEECCCCcCccc-c-cccccccCCEEECCCCcCCcc-hhhhcccC
Confidence 567778888888888888877666664 454 688888888888764 3 233478888888888888754 44577888
Q ss_pred CCceeecccccccccccccccccChHHhhhccCCCCCCccccCCCCCCeeeecCCcCc-cccchhhhhcccccceEEcc-
Q 041467 257 NLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLT-STLPQQILSVTTLSLYLELD- 334 (746)
Q Consensus 257 ~L~~L~Ls~N~l~~~~~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~l~~~L~Ls- 334 (746)
+|+.|+|++|+++ .+|..+..+++|+.|++++|.++ +.+|..+..++.+ +.|+++
T Consensus 215 ~L~~L~L~~N~l~----------------------~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L-~~l~l~~ 271 (317)
T 3o53_A 215 GVTWISLRNNKLV----------------------LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRV-QTVAKQT 271 (317)
T ss_dssp TCSEEECTTSCCC----------------------EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHH-HHHHHHH
T ss_pred cccEEECcCCccc----------------------chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccc-eEEECCC
Confidence 8888888888776 34556677788888888888887 6777777777777 567777
Q ss_pred CccccccCc
Q 041467 335 NNLLNGSLP 343 (746)
Q Consensus 335 ~N~l~~~~p 343 (746)
.+.+.|..|
T Consensus 272 ~~~l~~~~~ 280 (317)
T 3o53_A 272 VKKLTGQNE 280 (317)
T ss_dssp HHHHHSSSS
T ss_pred chhccCCch
Confidence 444555444
No 297
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=6.7e-29 Score=266.40 Aligned_cols=284 Identities=22% Similarity=0.264 Sum_probs=157.2
Q ss_pred cccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEE
Q 041467 17 RTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLR 96 (746)
Q Consensus 17 ~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 96 (746)
++.....++++|.++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|.+.+..|..|.++
T Consensus 30 C~~~~~c~~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l------- 99 (353)
T 2z80_A 30 CDRNGICKGSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSL------- 99 (353)
T ss_dssp ECTTSEEECCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTC-------
T ss_pred CCCCeEeeCCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCC-------
Confidence 455667999999998 7887765 489999999999997666689999999999999998876555444333
Q ss_pred ccCCCCcCcccCCCCCCEEeccCCCcccccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCcccc
Q 041467 97 IDCGGRIDSLGHLKSLLLLSLAFNQFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFI 176 (746)
Q Consensus 97 l~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 176 (746)
++|++|+|++|++++..+..|+.+++|++|+|++|.++..+. .
T Consensus 100 --------------------------------~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~-----~ 142 (353)
T 2z80_A 100 --------------------------------GSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGE-----T 142 (353)
T ss_dssp --------------------------------TTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCS-----S
T ss_pred --------------------------------CCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCc-----h
Confidence 333344444444443333335555555555555555543111 0
Q ss_pred ccccCCCCCCEEEcccc-cccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCC
Q 041467 177 NLLTNCSKLERLYFNRN-GFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGET 255 (746)
Q Consensus 177 ~~~~~l~~L~~L~Ls~N-~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 255 (746)
..+..+++|++|++++| .+.+..|..+..++ +|+.|++++|++++..|..|.++++|++|++++|++....+..+..+
T Consensus 143 ~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~-~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~ 221 (353)
T 2z80_A 143 SLFSHLTKLQILRVGNMDTFTKIQRKDFAGLT-FLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVT 221 (353)
T ss_dssp CSCTTCTTCCEEEEEESSSCCEECTTTTTTCC-EEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHT
T ss_pred hhhccCCCCcEEECCCCccccccCHHHccCCC-CCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhc
Confidence 13445555555555555 24433344455554 45555555555555555555555555555555555542222223345
Q ss_pred CCCceeecccccccccccccccccChHHhhhccCCCCCCccccCCCCCCeeeecCCcCcc----ccchhhhhcccccceE
Q 041467 256 PNLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTS----TLPQQILSVTTLSLYL 331 (746)
Q Consensus 256 ~~L~~L~Ls~N~l~~~~~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~l~~~L 331 (746)
++|+.|++++|.+++..+..+.. ......++.++|++|.+++ .+|..+..+++| +.|
T Consensus 222 ~~L~~L~L~~n~l~~~~~~~l~~------------------~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L-~~L 282 (353)
T 2z80_A 222 SSVECLELRDTDLDTFHFSELST------------------GETNSLIKKFTFRNVKITDESLFQVMKLLNQISGL-LEL 282 (353)
T ss_dssp TTEEEEEEESCBCTTCCCC------------------------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTC-CEE
T ss_pred ccccEEECCCCcccccccccccc------------------ccccchhhccccccccccCcchhhhHHHHhcccCC-CEE
Confidence 55556666655555433222111 1122334445555555443 345555555555 356
Q ss_pred EccCccccccCchhhhcccCCceeecCCCCCCCCCCCEEEccCCcCcccCC
Q 041467 332 ELDNNLLNGSLPPEVGNLKNLLRLHIPEYPENLSFFELLNLSYNYFGSEVP 382 (746)
Q Consensus 332 ~Ls~N~l~~~~p~~~~~l~~L~~L~lp~~~~~l~~L~~L~ls~N~l~~~~p 382 (746)
++++|+++ .+|..+ +..+++|+.|++++|++++..|
T Consensus 283 ~Ls~N~l~-~i~~~~--------------~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 283 EFSRNQLK-SVPDGI--------------FDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp ECCSSCCC-CCCTTT--------------TTTCTTCCEEECCSSCBCCCHH
T ss_pred ECCCCCCC-ccCHHH--------------HhcCCCCCEEEeeCCCccCcCC
Confidence 66666655 344332 1233445556666666665554
No 298
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=2.4e-28 Score=258.87 Aligned_cols=235 Identities=17% Similarity=0.219 Sum_probs=196.0
Q ss_pred cccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEE
Q 041467 17 RTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLR 96 (746)
Q Consensus 17 ~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 96 (746)
.+.+++|+|++|.++ .+|..++++++|++|+|++|.++ .+|..|+++++|++|+|++|.+. .+|..+.++++|++|+
T Consensus 80 ~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~ 156 (328)
T 4fcg_A 80 QPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELS 156 (328)
T ss_dssp STTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEE
T ss_pred ccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEE
Confidence 378999999999998 88999999999999999999999 89999999999999999999997 7788888888888888
Q ss_pred ccCCCCcCcccCCCCCCEEeccCCCcccccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCcccc
Q 041467 97 IDCGGRIDSLGHLKSLLLLSLAFNQFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFI 176 (746)
Q Consensus 97 l~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 176 (746)
+++|.....+.. .+....+. ..+.++++|+.|+|++|+|+ .+|..|+.+++|++|+|++|.+++ +|
T Consensus 157 L~~n~~~~~~p~--~~~~~~~~----~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-------l~ 222 (328)
T 4fcg_A 157 IRACPELTELPE--PLASTDAS----GEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-------LG 222 (328)
T ss_dssp EEEETTCCCCCS--CSEEEC-C----CCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-------CC
T ss_pred CCCCCCccccCh--hHhhccch----hhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-------Cc
Confidence 876543322211 01111111 23556888899999999988 677788899999999999999875 44
Q ss_pred ccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCC
Q 041467 177 NLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETP 256 (746)
Q Consensus 177 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 256 (746)
..+..+++|++|+|++|.+.+.+|..+..++ +|+.|++++|++.+.+|..|+++++|++|+|++|++.+.+|..+++++
T Consensus 223 ~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~-~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~ 301 (328)
T 4fcg_A 223 PAIHHLPKLEELDLRGCTALRNYPPIFGGRA-PLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLP 301 (328)
T ss_dssp GGGGGCTTCCEEECTTCTTCCBCCCCTTCCC-CCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSC
T ss_pred hhhccCCCCCEEECcCCcchhhhHHHhcCCC-CCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhccHHHhhcc
Confidence 5678889999999999988888898888887 799999999988888998899999999999999999999999999999
Q ss_pred CCceeeccccccc
Q 041467 257 NLQLLNIGGNHLQ 269 (746)
Q Consensus 257 ~L~~L~Ls~N~l~ 269 (746)
+|+.+++..|.+.
T Consensus 302 ~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 302 ANCIILVPPHLQA 314 (328)
T ss_dssp TTCEEECCGGGSC
T ss_pred CceEEeCCHHHHH
Confidence 9999998887765
No 299
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=1.3e-28 Score=264.04 Aligned_cols=273 Identities=18% Similarity=0.198 Sum_probs=206.0
Q ss_pred CCCcccccCccccccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCcc
Q 041467 3 SNNLLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDI 82 (746)
Q Consensus 3 ~n~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 82 (746)
+|++.++|.... ++|++|+|++|.+++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|.+.+..
T Consensus 40 ~~~l~~iP~~~~---~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 116 (353)
T 2z80_A 40 SGSLNSIPSGLT---EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLS 116 (353)
T ss_dssp STTCSSCCTTCC---TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCC
T ss_pred CCCccccccccc---ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCC
Confidence 455555555332 47889999999998766668899999999999999998877888999999999999999886543
Q ss_pred chhhcCCCCCCEEEccCCCCcCcccCCCCCCEEeccCCCcccccCCCCCcEeeCccCcccccCC-ccccCCCCCCEEEcc
Q 041467 83 LTEICSLFKLERLRIDCGGRIDSLGHLKSLLLLSLAFNQFLSLSNASSLEMIEFSRNQFSGGVS-VDFSRLKNLSWLNLG 161 (746)
Q Consensus 83 ~~~~~~l~~L~~L~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls 161 (746)
+..+ .++++|++|+|++|++++..+ ..|..+++|++|+++
T Consensus 117 ~~~~---------------------------------------~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~ 157 (353)
T 2z80_A 117 SSWF---------------------------------------KPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVG 157 (353)
T ss_dssp HHHH---------------------------------------TTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEE
T ss_pred HhHh---------------------------------------CCCccCCEEECCCCCCcccCchhhhccCCCCcEEECC
Confidence 3323 344566667777777775554 578889999999999
Q ss_pred CCC-CCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecc
Q 041467 162 VNN-LGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTME 240 (746)
Q Consensus 162 ~N~-l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~ 240 (746)
+|. ++. ..+..|.++++|++|++++|++++..|..+..+. +|++|++++|+++...+..+..+++|++|+++
T Consensus 158 ~n~~~~~------~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~-~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~ 230 (353)
T 2z80_A 158 NMDTFTK------IQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQ-NVSHLILHMKQHILLLEIFVDVTSSVECLELR 230 (353)
T ss_dssp ESSSCCE------ECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCS-EEEEEEEECSCSTTHHHHHHHHTTTEEEEEEE
T ss_pred CCccccc------cCHHHccCCCCCCEEECCCCCcCccCHHHHhccc-cCCeecCCCCccccchhhhhhhcccccEEECC
Confidence 884 554 2345678889999999999999888888888887 79999999999875333345568899999999
Q ss_pred cccceecCCcCCC---CCCCCceeecccccccccccccccccChHHhhhccCCCCCCccccCCCCCCeeeecCCcCcccc
Q 041467 241 SSQLIGTIPPLIG---ETPNLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTL 317 (746)
Q Consensus 241 ~N~l~~~~p~~~~---~l~~L~~L~Ls~N~l~~~~~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 317 (746)
+|++.+..+..+. ..+.++.++|++|.+.+. .+. .+|..+..+++|+.|++++|+++ .+
T Consensus 231 ~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~----------------~l~-~l~~~l~~l~~L~~L~Ls~N~l~-~i 292 (353)
T 2z80_A 231 DTDLDTFHFSELSTGETNSLIKKFTFRNVKITDE----------------SLF-QVMKLLNQISGLLELEFSRNQLK-SV 292 (353)
T ss_dssp SCBCTTCCCC------CCCCCCEEEEESCBCCHH----------------HHH-HHHHHHHTCTTCCEEECCSSCCC-CC
T ss_pred CCccccccccccccccccchhhccccccccccCc----------------chh-hhHHHHhcccCCCEEECCCCCCC-cc
Confidence 9998876554433 456788888888877632 111 35677888889999999999998 67
Q ss_pred chhh-hhcccccceEEccCccccccCc
Q 041467 318 PQQI-LSVTTLSLYLELDNNLLNGSLP 343 (746)
Q Consensus 318 p~~~-~~l~~l~~~L~Ls~N~l~~~~p 343 (746)
|..+ ..+++| ++|++++|++++..|
T Consensus 293 ~~~~~~~l~~L-~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 293 PDGIFDRLTSL-QKIWLHTNPWDCSCP 318 (353)
T ss_dssp CTTTTTTCTTC-CEEECCSSCBCCCHH
T ss_pred CHHHHhcCCCC-CEEEeeCCCccCcCC
Confidence 7775 678888 689999999886554
No 300
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.95 E-value=6.9e-31 Score=292.63 Aligned_cols=352 Identities=17% Similarity=0.124 Sum_probs=266.7
Q ss_pred ccccccccEEecccCcCcc----cCchhhhCCccCcEEecccCcCCccCCccc-cCCC----CCCeeeCcCCCCCC----
Q 041467 14 CILRTFLRYINLVNNGFNG----EIPHQIGRLISLERLILSNNSFSCAIPANL-SSGS----NLIKLSTDSNNLVR---- 80 (746)
Q Consensus 14 ~~~~~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~l~----~L~~L~L~~N~l~~---- 80 (746)
+..+++|++|+|++|.++. .++..+..+++|++|+|++|.++...+..+ ..++ +|++|+|++|.+..
T Consensus 24 ~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~ 103 (461)
T 1z7x_W 24 LPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCG 103 (461)
T ss_dssp HHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHH
T ss_pred HhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhhCCCceeEEEccCCCCCHHHHH
Confidence 4557899999999999974 467888999999999999999986544443 3455 79999999999874
Q ss_pred ccchhhcCCCCCCEEEccCCCCc----Cc-----ccCCCCCCEEeccCCCccc---------ccCCCCCcEeeCccCccc
Q 041467 81 DILTEICSLFKLERLRIDCGGRI----DS-----LGHLKSLLLLSLAFNQFLS---------LSNASSLEMIEFSRNQFS 142 (746)
Q Consensus 81 ~~~~~~~~l~~L~~L~l~~~~~~----~~-----~~~l~~L~~L~Ls~N~l~~---------l~~l~~L~~L~Ls~N~l~ 142 (746)
.++..+..+++|++|+++++... .. ....++|+.|+|++|++.. +..+++|+.|+|++|.++
T Consensus 104 ~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~ 183 (461)
T 1z7x_W 104 VLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDIN 183 (461)
T ss_dssp HHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCH
T ss_pred HHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcc
Confidence 56889999999999999987643 11 2346789999999999853 346799999999999998
Q ss_pred ccCCcccc-----CCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhh-----hcccccce
Q 041467 143 GGVSVDFS-----RLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIA-----NLSSTIKQ 212 (746)
Q Consensus 143 ~~~~~~~~-----~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-----~l~~~L~~ 212 (746)
...+..+. .+++|++|+|++|.++.... ..++..+..+++|++|++++|.+++.....+. .++ +|+.
T Consensus 184 ~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~--~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~-~L~~ 260 (461)
T 1z7x_W 184 EAGVRVLCQGLKDSPCQLEALKLESCGVTSDNC--RDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSS-RLRT 260 (461)
T ss_dssp HHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHH--HHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTC-CCCE
T ss_pred hHHHHHHHHHHhcCCCCceEEEccCCCCcHHHH--HHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCC-CceE
Confidence 65555443 36799999999999875211 12566778899999999999998754322222 344 7999
Q ss_pred EEcccCccccc----CCccccCCCCCCeeecccccceecCCcCCC-----CCCCCceeeccccccccc----cccc---c
Q 041467 213 IAMGSNRISST----IPHGIRNLVNLNWLTMESSQLIGTIPPLIG-----ETPNLQLLNIGGNHLQGS----ILSS---L 276 (746)
Q Consensus 213 L~l~~N~i~~~----~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~-----~l~~L~~L~Ls~N~l~~~----~~~~---l 276 (746)
|++++|+++.. ++..+.++++|++|++++|.+.+..+..+. ..++|++|+|++|.+++. ++.. .
T Consensus 261 L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~ 340 (461)
T 1z7x_W 261 LWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQN 340 (461)
T ss_dssp EECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHC
T ss_pred EECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhC
Confidence 99999999864 677888899999999999998754433332 337999999999999865 3333 3
Q ss_pred cccChHHhhhccCCCCCCccccC-----CCCCCeeeecCCcCcc----ccchhhhhcccccceEEccCccccccCchhhh
Q 041467 277 GNLTLQTYLFNNLQGNIPSSLAN-----CKSLLGLSVSHNKLTS----TLPQQILSVTTLSLYLELDNNLLNGSLPPEVG 347 (746)
Q Consensus 277 ~~l~~l~~l~n~l~~~~p~~~~~-----l~~L~~L~Ls~N~l~~----~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~ 347 (746)
.+|+.+++.+|.+.+..+..+.. .++|++|+|++|++++ .+|..+..+++| ++|++++|++++.-...+.
T Consensus 341 ~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L-~~L~l~~N~i~~~~~~~l~ 419 (461)
T 1z7x_W 341 RFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSL-RELDLSNNCLGDAGILQLV 419 (461)
T ss_dssp SSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCC-CEEECCSSSCCHHHHHHHH
T ss_pred CCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCc-cEEECCCCCCCHHHHHHHH
Confidence 56677777788887665555543 6799999999999986 789999999999 6899999999854222222
Q ss_pred cccCCceeecCCCCCCCCCCCEEEccCCcCcc
Q 041467 348 NLKNLLRLHIPEYPENLSFFELLNLSYNYFGS 379 (746)
Q Consensus 348 ~l~~L~~L~lp~~~~~l~~L~~L~ls~N~l~~ 379 (746)
. .+|. ....|+.|++.++.+..
T Consensus 420 ~-------~l~~---~~~~L~~L~~~~~~~~~ 441 (461)
T 1z7x_W 420 E-------SVRQ---PGCLLEQLVLYDIYWSE 441 (461)
T ss_dssp H-------HHTS---TTCCCCEEECTTCCCCH
T ss_pred H-------Hhcc---CCcchhheeecccccCH
Confidence 1 1121 23456777777666654
No 301
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.95 E-value=1.2e-27 Score=251.31 Aligned_cols=197 Identities=21% Similarity=0.277 Sum_probs=114.0
Q ss_pred CcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEccCCCCc------CcccCCCCCCEEec
Q 041467 44 LERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDCGGRI------DSLGHLKSLLLLSL 117 (746)
Q Consensus 44 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~~------~~~~~l~~L~~L~L 117 (746)
-+.++.+++.++ .+|..+. ++|++|+|++|.+....+..+.++++|++|+++++... ..+.
T Consensus 9 ~~~l~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~---------- 75 (306)
T 2z66_A 9 GTEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDF---------- 75 (306)
T ss_dssp TTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHH----------
T ss_pred CCEEEcCCCCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccc----------
Confidence 367999999998 5787664 68999999999986544344555655555555544321 1222
Q ss_pred cCCCcccccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccc
Q 041467 118 AFNQFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEG 197 (746)
Q Consensus 118 s~N~l~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~ 197 (746)
.+++|++|+|++|.+++ +|..|..+++|++|++++|.+++... ...+..+++|++|++++|.+++
T Consensus 76 ---------~~~~L~~L~Ls~n~i~~-l~~~~~~l~~L~~L~l~~n~l~~~~~-----~~~~~~l~~L~~L~l~~n~l~~ 140 (306)
T 2z66_A 76 ---------GTTSLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSE-----FSVFLSLRNLIYLDISHTHTRV 140 (306)
T ss_dssp ---------SCSCCCEEECCSCSEEE-EEEEEETCTTCCEEECTTSEEESSTT-----TTTTTTCTTCCEEECTTSCCEE
T ss_pred ---------cccccCEEECCCCcccc-ChhhcCCCCCCCEEECCCCccccccc-----chhhhhccCCCEEECCCCcCCc
Confidence 34555555555555552 33345555555555555555543211 1234555555555555555555
Q ss_pred cCChhhhhcccccceEEcccCcccc-cCCccccCCCCCCeeecccccceecCCcCCCCCCCCceeeccccccc
Q 041467 198 VLPHSIANLSSTIKQIAMGSNRISS-TIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQ 269 (746)
Q Consensus 198 ~~p~~~~~l~~~L~~L~l~~N~i~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 269 (746)
..|..+..++ +|++|++++|.+++ .+|..|..+++|++|++++|++.+..|..|..+++|+.|+|++|+++
T Consensus 141 ~~~~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~ 212 (306)
T 2z66_A 141 AFNGIFNGLS-SLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFF 212 (306)
T ss_dssp CSTTTTTTCT-TCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCS
T ss_pred cchhhcccCc-CCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccC
Confidence 5555555554 45555555555554 35555555556666666666555555555555556666666655554
No 302
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=2.9e-27 Score=262.47 Aligned_cols=240 Identities=21% Similarity=0.198 Sum_probs=208.5
Q ss_pred ccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEc
Q 041467 18 TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRI 97 (746)
Q Consensus 18 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 97 (746)
...+.++.+++.++ .+|..+. ++|++|+|++|+|++..|..|.++++|+.|+|++|.+.+..+..|.++++|++|+|
T Consensus 54 ~~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L 130 (452)
T 3zyi_A 54 NQFSKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLEL 130 (452)
T ss_dssp SSSCEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCcEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEEC
Confidence 34678888888887 6776654 58889999999998877888888999999999999888777788888889999988
Q ss_pred cCCCCc----CcccCCCCCCEEeccCCCccc-----ccCCCCCcEeeCcc-CcccccCCccccCCCCCCEEEccCCCCCC
Q 041467 98 DCGGRI----DSLGHLKSLLLLSLAFNQFLS-----LSNASSLEMIEFSR-NQFSGGVSVDFSRLKNLSWLNLGVNNLGS 167 (746)
Q Consensus 98 ~~~~~~----~~~~~l~~L~~L~Ls~N~l~~-----l~~l~~L~~L~Ls~-N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 167 (746)
++|... ..|.++++|+.|+|++|++.. |.++++|+.|+|++ |.+....+..|.++++|++|+|++|.+++
T Consensus 131 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~ 210 (452)
T 3zyi_A 131 FDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD 210 (452)
T ss_dssp CSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS
T ss_pred CCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc
Confidence 876533 457889999999999999954 56789999999998 66766666789999999999999999986
Q ss_pred CCCCCccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceec
Q 041467 168 GTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGT 247 (746)
Q Consensus 168 ~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~ 247 (746)
. | .+..+++|+.|+|++|.+++..|..|..+. +|+.|++++|++++..|..|.++++|+.|+|++|++++.
T Consensus 211 ~-------~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 281 (452)
T 3zyi_A 211 M-------P-NLTPLVGLEELEMSGNHFPEIRPGSFHGLS-SLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSL 281 (452)
T ss_dssp C-------C-CCTTCTTCCEEECTTSCCSEECGGGGTTCT-TCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCC
T ss_pred c-------c-cccccccccEEECcCCcCcccCcccccCcc-CCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCcc
Confidence 3 2 377899999999999999998899999998 799999999999999999999999999999999999988
Q ss_pred CCcCCCCCCCCceeeccccccc
Q 041467 248 IPPLIGETPNLQLLNIGGNHLQ 269 (746)
Q Consensus 248 ~p~~~~~l~~L~~L~Ls~N~l~ 269 (746)
.+..|..+++|+.|+|++|.+.
T Consensus 282 ~~~~~~~l~~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 282 PHDLFTPLRYLVELHLHHNPWN 303 (452)
T ss_dssp CTTSSTTCTTCCEEECCSSCEE
T ss_pred ChHHhccccCCCEEEccCCCcC
Confidence 8888999999999999999886
No 303
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.95 E-value=3.5e-27 Score=260.85 Aligned_cols=245 Identities=20% Similarity=0.201 Sum_probs=212.4
Q ss_pred cccccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCC
Q 041467 13 LCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKL 92 (746)
Q Consensus 13 ~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 92 (746)
.|......+.++.+++.++ .+|..+. ++++.|+|++|+|++..+..|.++++|++|+|++|.+.+..+..|.++++|
T Consensus 38 ~C~C~~~~~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L 114 (440)
T 3zyj_A 38 VCSCSNQFSKVICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANL 114 (440)
T ss_dssp SSEECTTSCEEECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSC
T ss_pred CCEeCCCCCEEEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccC
Confidence 3443345678899999987 7787665 688999999999998778889999999999999999988777889999999
Q ss_pred CEEEccCCCCc----CcccCCCCCCEEeccCCCccc-----ccCCCCCcEeeCcc-CcccccCCccccCCCCCCEEEccC
Q 041467 93 ERLRIDCGGRI----DSLGHLKSLLLLSLAFNQFLS-----LSNASSLEMIEFSR-NQFSGGVSVDFSRLKNLSWLNLGV 162 (746)
Q Consensus 93 ~~L~l~~~~~~----~~~~~l~~L~~L~Ls~N~l~~-----l~~l~~L~~L~Ls~-N~l~~~~~~~~~~l~~L~~L~Ls~ 162 (746)
++|+|++|... ..|.++++|+.|+|++|++.. |.++++|+.|+|++ |.+....+..|.++++|++|+|++
T Consensus 115 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~ 194 (440)
T 3zyj_A 115 NTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAM 194 (440)
T ss_dssp CEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTT
T ss_pred CEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCC
Confidence 99999886543 458889999999999999954 56789999999998 566666667899999999999999
Q ss_pred CCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccc
Q 041467 163 NNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESS 242 (746)
Q Consensus 163 N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N 242 (746)
|.++.. | .+..+++|+.|+|++|++++..|..|..+. +|+.|++++|+|++..+..|.++++|++|+|++|
T Consensus 195 n~l~~~-------~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N 265 (440)
T 3zyj_A 195 CNLREI-------P-NLTPLIKLDELDLSGNHLSAIRPGSFQGLM-HLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHN 265 (440)
T ss_dssp SCCSSC-------C-CCTTCSSCCEEECTTSCCCEECTTTTTTCT-TCCEEECTTCCCCEECTTSSTTCTTCCEEECTTS
T ss_pred CcCccc-------c-ccCCCcccCEEECCCCccCccChhhhccCc-cCCEEECCCCceeEEChhhhcCCCCCCEEECCCC
Confidence 999853 3 377899999999999999988899999997 7999999999999988999999999999999999
Q ss_pred cceecCCcCCCCCCCCceeeccccccc
Q 041467 243 QLIGTIPPLIGETPNLQLLNIGGNHLQ 269 (746)
Q Consensus 243 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 269 (746)
++++..+..|..+++|+.|+|++|.+.
T Consensus 266 ~l~~~~~~~~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 266 NLTLLPHDLFTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp CCCCCCTTTTSSCTTCCEEECCSSCEE
T ss_pred CCCccChhHhccccCCCEEEcCCCCcc
Confidence 999888888999999999999999886
No 304
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.95 E-value=1e-27 Score=253.93 Aligned_cols=232 Identities=19% Similarity=0.251 Sum_probs=164.5
Q ss_pred CccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEccCCCCcCcccCCCCCCEEeccCC
Q 041467 41 LISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDCGGRIDSLGHLKSLLLLSLAFN 120 (746)
Q Consensus 41 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~l~~L~~L~Ls~N 120 (746)
..+++.|+|++|.++ .+|..++++++|++|+|++|.+. .+|..+++
T Consensus 80 ~~~l~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~n~l~-~lp~~~~~-------------------------------- 125 (328)
T 4fcg_A 80 QPGRVALELRSVPLP-QFPDQAFRLSHLQHMTIDAAGLM-ELPDTMQQ-------------------------------- 125 (328)
T ss_dssp STTCCEEEEESSCCS-SCCSCGGGGTTCSEEEEESSCCC-CCCSCGGG--------------------------------
T ss_pred ccceeEEEccCCCch-hcChhhhhCCCCCEEECCCCCcc-chhHHHhc--------------------------------
Confidence 478999999999998 68888888999999999999886 56654433
Q ss_pred CcccccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCc---cccccccCCCCCCEEEcccccccc
Q 041467 121 QFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANEL---DFINLLTNCSKLERLYFNRNGFEG 197 (746)
Q Consensus 121 ~l~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~---~~~~~~~~l~~L~~L~Ls~N~l~~ 197 (746)
+++|++|+|++|+++ .+|..|+.+++|++|+|++|++.+..+..+ ..+..+.++++|++|+|++|+++
T Consensus 126 -------l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~- 196 (328)
T 4fcg_A 126 -------FAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR- 196 (328)
T ss_dssp -------GTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-
T ss_pred -------cCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-
Confidence 334444555555555 445566666667777776655544222111 01122445778888888888887
Q ss_pred cCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCCCceeeccccccccccccccc
Q 041467 198 VLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLG 277 (746)
Q Consensus 198 ~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~ 277 (746)
.+|..+..++ +|+.|++++|++++ +|..|+.+++|++|+|++|++.+.+|..++.+++|++|+|++|.+.+
T Consensus 197 ~lp~~l~~l~-~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~------- 267 (328)
T 4fcg_A 197 SLPASIANLQ-NLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLL------- 267 (328)
T ss_dssp CCCGGGGGCT-TCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCC-------
T ss_pred cchHhhcCCC-CCCEEEccCCCCCc-CchhhccCCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchh-------
Confidence 6777777776 68888888888875 66677888888888888888888888888888888888888776553
Q ss_pred ccChHHhhhccCCCCCCccccCCCCCCeeeecCCcCccccchhhhhcccccceEEccCcccc
Q 041467 278 NLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLN 339 (746)
Q Consensus 278 ~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~ 339 (746)
.+|..++++++|+.|+|++|++.+.+|..+..++++ ..+++..|.+.
T Consensus 268 --------------~~p~~~~~l~~L~~L~L~~n~~~~~iP~~l~~L~~L-~~l~l~~~~~~ 314 (328)
T 4fcg_A 268 --------------TLPLDIHRLTQLEKLDLRGCVNLSRLPSLIAQLPAN-CIILVPPHLQA 314 (328)
T ss_dssp --------------BCCTTGGGCTTCCEEECTTCTTCCCCCGGGGGSCTT-CEEECCGGGSC
T ss_pred --------------hcchhhhcCCCCCEEeCCCCCchhhccHHHhhccCc-eEEeCCHHHHH
Confidence 455566677777888888877777778777777777 46777666554
No 305
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.95 E-value=5.7e-29 Score=281.79 Aligned_cols=152 Identities=11% Similarity=0.028 Sum_probs=113.9
Q ss_pred EEeehhhhh----------hhhhhHHHHHHHHHhhcC-CCCceeeEEEEEecCCcccchhhhccCCccc-----ccCCCH
Q 041467 499 VAMKVANLK----------QKEASRSFAAEFNALRNI-RHRNLIKIITICSSIDFEGFDFKAISNGQLR-----LCNLSL 562 (746)
Q Consensus 499 vavK~~~~~----------~~~~~~~~~~E~~~l~~l-~HpnIv~l~~~~~~~~~~~lv~e~~~~g~l~-----~~~l~~ 562 (746)
||||++... .....++|.+|+++|+++ .||||+++++++++.+..|+||||++||+|. ...++.
T Consensus 262 ~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVMEyv~G~~L~d~i~~~~~l~~ 341 (569)
T 4azs_A 262 YVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVMEKLPGRLLSDMLAAGEEIDR 341 (569)
T ss_dssp EEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEEECCCSEEHHHHHHTTCCCCH
T ss_pred eEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEEecCCCCcHHHHHHhCCCCCH
Confidence 788877532 233456799999999999 6999999999999999999999999999996 345554
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCcccccccccccccccccc
Q 041467 563 TQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVA 642 (746)
Q Consensus 563 ~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~a 642 (746)
. +|+.||+.||+|+|++ +||||||||+|||++++|++||+|||+|+...... ....+.+||++|||
T Consensus 342 ~---~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~--------~~~~t~vGTp~YmA 407 (569)
T 4azs_A 342 E---KILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDC--------SWPTNLVQSFFVFV 407 (569)
T ss_dssp H---HHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESCC-----------CCSHHHHHHHHHHH
T ss_pred H---HHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeCCCCC--------ccccCceechhhcc
Confidence 3 5899999999999999 99999999999999999999999999998764321 22345789999999
Q ss_pred cccccccccccCCCccceeeccceee
Q 041467 643 PVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 643 PE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
||++.+.. . .++|+||+|++++
T Consensus 408 PE~l~g~~-~---~~~d~~s~g~~~~ 429 (569)
T 4azs_A 408 NELFAENK-S---WNGFWRSAPVHPF 429 (569)
T ss_dssp HHHC---------------------C
T ss_pred HHHhCCCC-C---Ccccccccccchh
Confidence 99998753 2 2499999999887
No 306
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=9.1e-27 Score=265.42 Aligned_cols=268 Identities=24% Similarity=0.257 Sum_probs=173.5
Q ss_pred ccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEc
Q 041467 18 TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRI 97 (746)
Q Consensus 18 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 97 (746)
..+++|++++|.|+ .+|..+. ++|++|+|++|+|+ .+|. .+++|++|+|++|++.+ +|. .+++|++|++
T Consensus 40 ~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~L 108 (622)
T 3g06_A 40 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLTS-LPV---LPPGLLELSI 108 (622)
T ss_dssp HCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCSC-CCC---CCTTCCEEEE
T ss_pred CCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCCc-CCC---CCCCCCEEEC
Confidence 45899999999998 7888776 79999999999999 5676 57899999999999854 554 5667777777
Q ss_pred cCCCCcCcccCCCCCCEEeccCCCccccc-CCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCcccc
Q 041467 98 DCGGRIDSLGHLKSLLLLSLAFNQFLSLS-NASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFI 176 (746)
Q Consensus 98 ~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~-~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 176 (746)
++|.....-..+++|+.|++++|++..++ .+++|+.|+|++|++++. |. .+++|+.|++++|.++.. |
T Consensus 109 s~N~l~~l~~~l~~L~~L~L~~N~l~~lp~~l~~L~~L~Ls~N~l~~l-~~---~~~~L~~L~L~~N~l~~l-------~ 177 (622)
T 3g06_A 109 FSNPLTHLPALPSGLCKLWIFGNQLTSLPVLPPGLQELSVSDNQLASL-PA---LPSELCKLWAYNNQLTSL-------P 177 (622)
T ss_dssp CSCCCCCCCCCCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSCC-CC---CCTTCCEEECCSSCCSCC-------C
T ss_pred cCCcCCCCCCCCCCcCEEECCCCCCCcCCCCCCCCCEEECcCCcCCCc-CC---ccCCCCEEECCCCCCCCC-------c
Confidence 66543322224556666666666665543 235666666666666543 22 235566666666666542 2
Q ss_pred ccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCC
Q 041467 177 NLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETP 256 (746)
Q Consensus 177 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 256 (746)
..+++|+.|++++|.+++ +|.. + .+|+.|++++|.++. +|.. +++|+.|+|++|++++ +| ..++
T Consensus 178 ---~~~~~L~~L~Ls~N~l~~-l~~~---~-~~L~~L~L~~N~l~~-l~~~---~~~L~~L~Ls~N~L~~-lp---~~l~ 241 (622)
T 3g06_A 178 ---MLPSGLQELSVSDNQLAS-LPTL---P-SELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLTS-LP---VLPS 241 (622)
T ss_dssp ---CCCTTCCEEECCSSCCSC-CCCC---C-TTCCEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CC---CCCT
T ss_pred ---ccCCCCcEEECCCCCCCC-CCCc---c-chhhEEECcCCcccc-cCCC---CCCCCEEEccCCccCc-CC---CCCC
Confidence 234556666666666653 3332 1 246666666666653 4432 3556666666666653 33 2345
Q ss_pred CCceeecccccccccccccccccChHHhhhccCCCCCCccccCCCCCCeeeecCCcCccccchhhhhcccccceEEccCc
Q 041467 257 NLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNN 336 (746)
Q Consensus 257 ~L~~L~Ls~N~l~~~~~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N 336 (746)
+|+.|+|++|+|+ .+|. .+++|+.|+|++|+|+ .+|..+..+++| +.|+|++|
T Consensus 242 ~L~~L~Ls~N~L~----------------------~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L-~~L~L~~N 294 (622)
T 3g06_A 242 ELKELMVSGNRLT----------------------SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSE-TTVNLEGN 294 (622)
T ss_dssp TCCEEECCSSCCS----------------------CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTT-CEEECCSC
T ss_pred cCcEEECCCCCCC----------------------cCCc---ccccCcEEeCCCCCCC-cCCHHHhhcccc-CEEEecCC
Confidence 5666666666555 2333 4567778888888887 677777777777 57888888
Q ss_pred cccccCchhhhccc
Q 041467 337 LLNGSLPPEVGNLK 350 (746)
Q Consensus 337 ~l~~~~p~~~~~l~ 350 (746)
++++..|..+..++
T Consensus 295 ~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 295 PLSERTLQALREIT 308 (622)
T ss_dssp CCCHHHHHHHHHHH
T ss_pred CCCCcCHHHHHhcc
Confidence 88877777766554
No 307
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.95 E-value=2e-27 Score=246.96 Aligned_cols=227 Identities=21% Similarity=0.244 Sum_probs=183.6
Q ss_pred ccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEccC
Q 041467 20 LRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDC 99 (746)
Q Consensus 20 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 99 (746)
-+.++.+++.++ .+|..+ .++|++|+|++|++++..+..|.++++|++|+|++|.+.+..|..+.++++|++|+++.
T Consensus 13 ~~~~~c~~~~l~-~ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 89 (285)
T 1ozn_A 13 KVTTSCPQQGLQ-AVPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSD 89 (285)
T ss_dssp SCEEECCSSCCS-SCCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CeEEEcCcCCcc-cCCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCC
Confidence 478999999997 677655 46899999999999987778899999999999999988766666665555555554444
Q ss_pred CCCcCcccCCCCCCEEeccCCCcccccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccc
Q 041467 100 GGRIDSLGHLKSLLLLSLAFNQFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLL 179 (746)
Q Consensus 100 ~~~~~~~~~l~~L~~L~Ls~N~l~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~ 179 (746)
+..+..+. -..+..+++|++|++++|++++..+..|..+++|++|+|++|.++..+ +..|
T Consensus 90 n~~l~~~~--------------~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~------~~~~ 149 (285)
T 1ozn_A 90 NAQLRSVD--------------PATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALP------DDTF 149 (285)
T ss_dssp CTTCCCCC--------------TTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC------TTTT
T ss_pred CCCccccC--------------HHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccC------HhHh
Confidence 32111000 023556788889999999999888888999999999999999998632 3457
Q ss_pred cCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCCCc
Q 041467 180 TNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQ 259 (746)
Q Consensus 180 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 259 (746)
..+++|++|+|++|++++..+..+..+. +|+.|++++|++++..|..|.++++|+.|++++|++.+..+..+..+++|+
T Consensus 150 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 228 (285)
T 1ozn_A 150 RDLGNLTHLFLHGNRISSVPERAFRGLH-SLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQ 228 (285)
T ss_dssp TTCTTCCEEECCSSCCCEECTTTTTTCT-TCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCC
T ss_pred ccCCCccEEECCCCcccccCHHHhcCcc-ccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccC
Confidence 8889999999999999876666788887 799999999999988899999999999999999999987777799999999
Q ss_pred eeecccccccc
Q 041467 260 LLNIGGNHLQG 270 (746)
Q Consensus 260 ~L~Ls~N~l~~ 270 (746)
.|+|++|.+..
T Consensus 229 ~L~l~~N~~~c 239 (285)
T 1ozn_A 229 YLRLNDNPWVC 239 (285)
T ss_dssp EEECCSSCEEC
T ss_pred EEeccCCCccC
Confidence 99999999875
No 308
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=7.7e-29 Score=261.00 Aligned_cols=223 Identities=16% Similarity=0.155 Sum_probs=106.4
Q ss_pred cccccEEecccCcCcccCchhhhCCccCcEEecccCcC-CccCCcccc-------CCCCCCeeeCcCCCCCCccchhhcC
Q 041467 17 RTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSF-SCAIPANLS-------SGSNLIKLSTDSNNLVRDILTEICS 88 (746)
Q Consensus 17 ~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l-~~~~p~~~~-------~l~~L~~L~L~~N~l~~~~~~~~~~ 88 (746)
.++|++|++++|.+ .+|..+... |++|+|++|.+ .+.+|..+. ++++|++|+|++|.+.+.+|..+.
T Consensus 42 ~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~- 116 (312)
T 1wwl_A 42 GRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLL- 116 (312)
T ss_dssp EEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSS-
T ss_pred CCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHH-
Confidence 35566677777776 566655543 66677777776 334555544 566677777776666655554320
Q ss_pred CCCCCEEEccCCCCcCcccCCCCCCEEeccCCCcccc----cCC-----CCCcEeeCccCcccccCCccccCCCCCCEEE
Q 041467 89 LFKLERLRIDCGGRIDSLGHLKSLLLLSLAFNQFLSL----SNA-----SSLEMIEFSRNQFSGGVSVDFSRLKNLSWLN 159 (746)
Q Consensus 89 l~~L~~L~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~l----~~l-----~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 159 (746)
+..+++|+.|+|++|++..+ ..+ ++|++|+|++|++++..+..|+.+++|++|+
T Consensus 117 -----------------~~~l~~L~~L~Ls~N~l~~~~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 179 (312)
T 1wwl_A 117 -----------------EATGPDLNILNLRNVSWATRDAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLD 179 (312)
T ss_dssp -----------------SCCSCCCSEEEEESCBCSSSSSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEE
T ss_pred -----------------HhcCCCccEEEccCCCCcchhHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEE
Confidence 13334444444444444221 112 5555555555555555555555555555555
Q ss_pred ccCCCCCCCCCCCccccccc--cCCCCCCEEEcccccccc--cCChh-hhhcccccceEEcccCcccccCC-ccccCCCC
Q 041467 160 LGVNNLGSGTANELDFINLL--TNCSKLERLYFNRNGFEG--VLPHS-IANLSSTIKQIAMGSNRISSTIP-HGIRNLVN 233 (746)
Q Consensus 160 Ls~N~l~~~~~~~~~~~~~~--~~l~~L~~L~Ls~N~l~~--~~p~~-~~~l~~~L~~L~l~~N~i~~~~p-~~~~~l~~ 233 (746)
|++|++.+. ...+..+ ..+++|++|+|++|++++ .++.. +..++ +|+.|++++|++++..| ..+..+++
T Consensus 180 Ls~N~l~~~----~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~~l~~ 254 (312)
T 1wwl_A 180 LSDNPELGE----RGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARV-QLQGLDLSHNSLRDAAGAPSCDWPSQ 254 (312)
T ss_dssp CCSCTTCHH----HHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTC-CCSEEECTTSCCCSSCCCSCCCCCTT
T ss_pred CCCCCcCcc----hHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCC-CCCEEECCCCcCCcccchhhhhhcCC
Confidence 555554320 0012222 445555555555555541 11111 12222 34444444444444332 22333444
Q ss_pred CCeeecccccceecCCcCCCCCCCCceeeccccccc
Q 041467 234 LNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQ 269 (746)
Q Consensus 234 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 269 (746)
|++|+|++|+++ .+|..+. ++|++|+|++|+|+
T Consensus 255 L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~ 287 (312)
T 1wwl_A 255 LNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLD 287 (312)
T ss_dssp CCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCC
T ss_pred CCEEECCCCccC-hhhhhcc--CCceEEECCCCCCC
Confidence 444444444443 3333333 34444444444433
No 309
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.95 E-value=1.4e-27 Score=266.66 Aligned_cols=238 Identities=21% Similarity=0.165 Sum_probs=149.6
Q ss_pred cCchhhhCCc----cCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEccCCCCcCcccC
Q 041467 33 EIPHQIGRLI----SLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDCGGRIDSLGH 108 (746)
Q Consensus 33 ~~p~~~~~l~----~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~ 108 (746)
.+|..+..+. +|++|+|++|.|++..|..|+.+++|++|+|++|.+.+..| ++.
T Consensus 21 ~l~~~l~~l~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~----------------------l~~ 78 (487)
T 3oja_A 21 SLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD----------------------LES 78 (487)
T ss_dssp THHHHHHTTSTTGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE----------------------CTT
T ss_pred hhHHHHHHhcccCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc----------------------ccc
Confidence 3455555554 78899999999888777888888889999998888754332 344
Q ss_pred CCCCCEEeccCCCcccccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEE
Q 041467 109 LKSLLLLSLAFNQFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERL 188 (746)
Q Consensus 109 l~~L~~L~Ls~N~l~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L 188 (746)
+++|+.|+|++|.+..+...++|+.|+|++|.|++..+. .+++|+.|+|++|.+++ ..|..++.+++|+.|
T Consensus 79 l~~L~~L~Ls~N~l~~l~~~~~L~~L~L~~N~l~~~~~~---~l~~L~~L~L~~N~l~~------~~~~~~~~l~~L~~L 149 (487)
T 3oja_A 79 LSTLRTLDLNNNYVQELLVGPSIETLHAANNNISRVSCS---RGQGKKNIYLANNKITM------LRDLDEGCRSRVQYL 149 (487)
T ss_dssp CTTCCEEECCSSEEEEEEECTTCCEEECCSSCCCCEEEC---CCSSCEEEECCSSCCCS------GGGBCGGGGSSEEEE
T ss_pred CCCCCEEEecCCcCCCCCCCCCcCEEECcCCcCCCCCcc---ccCCCCEEECCCCCCCC------CCchhhcCCCCCCEE
Confidence 566666667777776666667777777777777765443 34567777777777665 334455566666666
Q ss_pred EcccccccccCChhhh-hcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCCCceeeccccc
Q 041467 189 YFNRNGFEGVLPHSIA-NLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNH 267 (746)
Q Consensus 189 ~Ls~N~l~~~~p~~~~-~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 267 (746)
+|++|.+++..|..+. .++ +|+.|+|++|.|++. | .+..+++|+.|+|++|++++..| .+..+++|+.|+|++|.
T Consensus 150 ~Ls~N~l~~~~~~~l~~~l~-~L~~L~Ls~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~ 225 (487)
T 3oja_A 150 DLKLNEIDTVNFAELAASSD-TLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNK 225 (487)
T ss_dssp ECTTSCCCEEEGGGGGGGTT-TCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSC
T ss_pred ECCCCCCCCcChHHHhhhCC-cccEEecCCCccccc-c-ccccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCc
Confidence 6666666665665554 344 566666666666653 2 12345666666666666654333 35566666666666665
Q ss_pred ccccccccccccChHHhhhccCCCCCCccccCCCCCCeeeecCCcCc-cccchhhhhcccc
Q 041467 268 LQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLT-STLPQQILSVTTL 327 (746)
Q Consensus 268 l~~~~~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~l 327 (746)
++ .+|..+..+++|+.|++++|.+. +.+|..+..+..+
T Consensus 226 l~----------------------~lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~~l~~L 264 (487)
T 3oja_A 226 LV----------------------LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRV 264 (487)
T ss_dssp CC----------------------EECTTCCCCTTCCEEECTTCCBCHHHHHHHHTTCHHH
T ss_pred Cc----------------------ccchhhccCCCCCEEEcCCCCCcCcchHHHHHhCCCC
Confidence 55 23334455556666666666665 4455555555544
No 310
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.94 E-value=1.1e-28 Score=270.00 Aligned_cols=175 Identities=17% Similarity=0.176 Sum_probs=125.1
Q ss_pred hhcCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCC-Cceee------------
Q 041467 478 ATNNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRH-RNLIK------------ 532 (746)
Q Consensus 478 ~~~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~H-pnIv~------------ 532 (746)
....|...+.||+|+||.||+ ||||++.... ....+.+.+|+.+++.++| +|+..
T Consensus 76 ~~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~ 155 (413)
T 3dzo_A 76 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD 155 (413)
T ss_dssp CCEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCE
T ss_pred CceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchh
Confidence 344577788999999999997 9999886332 2336779999999999987 32111
Q ss_pred ---------EEEEEecC-----CcccchhhhccCCccc------------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCC
Q 041467 533 ---------IITICSSI-----DFEGFDFKAISNGQLR------------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPS 586 (746)
Q Consensus 533 ---------l~~~~~~~-----~~~~lv~e~~~~g~l~------------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ 586 (746)
+..++... ...+++|+++ .|++. ...+++..+..++.|+++||+|||++ +
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ 231 (413)
T 3dzo_A 156 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---G 231 (413)
T ss_dssp EEECCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred hcccCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---C
Confidence 11111111 1223444433 44443 23467889999999999999999999 9
Q ss_pred eEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCccccccccccccccccccccccccc-------ccccCCCccc
Q 041467 587 IVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAAR-------NLENREKRHT 659 (746)
Q Consensus 587 ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~-------~~~~~~~~~D 659 (746)
|+||||||+|||++.++.+||+|||+|+.... .....+| +.|||||++.+. ....++.++|
T Consensus 232 iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~-----------~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~D 299 (413)
T 3dzo_A 232 LVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA-----------SAVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFD 299 (413)
T ss_dssp EECSCCCGGGEEECTTCCEEECCGGGCEETTE-----------EECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHH
T ss_pred cccCCcccceEEEecCCeEEEEeccceeecCC-----------ccccCCC-CceeCchhhhccccccccccCcCCCchhh
Confidence 99999999999999999999999999986421 1334678 999999999422 1112244699
Q ss_pred eeeccceee
Q 041467 660 VMSFPQRFA 668 (746)
Q Consensus 660 iwSlG~i~~ 668 (746)
||||||++|
T Consensus 300 vwSlGvil~ 308 (413)
T 3dzo_A 300 TWTLGLAIY 308 (413)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999998
No 311
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.94 E-value=1.3e-27 Score=252.33 Aligned_cols=240 Identities=19% Similarity=0.215 Sum_probs=191.4
Q ss_pred cccccCccccccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchh
Q 041467 6 LLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTE 85 (746)
Q Consensus 6 ~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~ 85 (746)
+...+...+..+++|++|+|++|.+++..|..|..+++|++|+|++|++++..| |..+++|++|+|++|.+.+.
T Consensus 22 l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l---- 95 (317)
T 3o53_A 22 LKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQEL---- 95 (317)
T ss_dssp HHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEE----
T ss_pred hhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCccccc----
Confidence 333344444556789999999999998888999999999999999999987554 99999999999999987432
Q ss_pred hcCCCCCCEEEccCCCCcCcccCCCCCCEEeccCCCcccc--cCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCC
Q 041467 86 ICSLFKLERLRIDCGGRIDSLGHLKSLLLLSLAFNQFLSL--SNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVN 163 (746)
Q Consensus 86 ~~~l~~L~~L~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~l--~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 163 (746)
...++|+.|++++|++..+ ..+++|+.|++++|++++..+..|+.+++|++|+|++|
T Consensus 96 ---------------------~~~~~L~~L~l~~n~l~~~~~~~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N 154 (317)
T 3o53_A 96 ---------------------LVGPSIETLHAANNNISRVSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLN 154 (317)
T ss_dssp ---------------------EECTTCCEEECCSSCCSEEEECCCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTS
T ss_pred ---------------------cCCCCcCEEECCCCccCCcCccccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCC
Confidence 1235677777888887543 35788999999999999888888999999999999999
Q ss_pred CCCCCCCCCccccccc-cCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccc
Q 041467 164 NLGSGTANELDFINLL-TNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESS 242 (746)
Q Consensus 164 ~l~~~~~~~~~~~~~~-~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N 242 (746)
.+++ ..+..+ ..+++|++|+|++|.+++. |.. ..++ +|+.|++++|++++ +|..|..+++|++|+|++|
T Consensus 155 ~l~~------~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~-~~l~-~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~L~~N 224 (317)
T 3o53_A 155 EIDT------VNFAELAASSDTLEHLNLQYNFIYDV-KGQ-VVFA-KLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNN 224 (317)
T ss_dssp CCCE------EEGGGGGGGTTTCCEEECTTSCCCEE-ECC-CCCT-TCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTS
T ss_pred CCCc------ccHHHHhhccCcCCEEECCCCcCccc-ccc-cccc-cCCEEECCCCcCCc-chhhhcccCcccEEECcCC
Confidence 9986 233334 4788999999999999855 332 2355 79999999999996 5666899999999999999
Q ss_pred cceecCCcCCCCCCCCceeeccccccc-ccccccccccChHH
Q 041467 243 QLIGTIPPLIGETPNLQLLNIGGNHLQ-GSILSSLGNLTLQT 283 (746)
Q Consensus 243 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~~~~l~~l~~l~ 283 (746)
++. .+|..+..+++|+.|+|++|.+. +.++..+..+..+.
T Consensus 225 ~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~ 265 (317)
T 3o53_A 225 KLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQ 265 (317)
T ss_dssp CCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHH
T ss_pred ccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccce
Confidence 998 46888999999999999999998 55555554444333
No 312
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.94 E-value=7.3e-26 Score=257.96 Aligned_cols=261 Identities=24% Similarity=0.228 Sum_probs=215.9
Q ss_pred CCCcccccCccccccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCcc
Q 041467 3 SNNLLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDI 82 (746)
Q Consensus 3 ~n~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 82 (746)
+|++.++|.... ++|++|+|++|.|+ .+|. .+++|++|+|++|+|++ +|. .+++|++|+|++|.+.+ +
T Consensus 49 ~n~L~~lp~~l~---~~L~~L~L~~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-l 116 (622)
T 3g06_A 49 ESGLTTLPDCLP---AHITTLVIPDNNLT-SLPA---LPPELRTLEVSGNQLTS-LPV---LPPGLLELSIFSNPLTH-L 116 (622)
T ss_dssp SSCCSCCCSCCC---TTCSEEEECSCCCS-CCCC---CCTTCCEEEECSCCCSC-CCC---CCTTCCEEEECSCCCCC-C
T ss_pred CCCcCccChhhC---CCCcEEEecCCCCC-CCCC---cCCCCCEEEcCCCcCCc-CCC---CCCCCCEEECcCCcCCC-C
Confidence 455665554333 78999999999998 5776 57999999999999984 676 67999999999999965 4
Q ss_pred chhhcCCCCCCEEEccCCCCcCcccCCCCCCEEeccCCCccccc-CCCCCcEeeCccCcccccCCccccCCCCCCEEEcc
Q 041467 83 LTEICSLFKLERLRIDCGGRIDSLGHLKSLLLLSLAFNQFLSLS-NASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLG 161 (746)
Q Consensus 83 ~~~~~~l~~L~~L~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~-~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 161 (746)
|. .+++|+.|++++|.....-..+++|+.|+|++|++..++ .+++|+.|++++|+|++. | ..+++|+.|+|+
T Consensus 117 ~~---~l~~L~~L~L~~N~l~~lp~~l~~L~~L~Ls~N~l~~l~~~~~~L~~L~L~~N~l~~l-~---~~~~~L~~L~Ls 189 (622)
T 3g06_A 117 PA---LPSGLCKLWIFGNQLTSLPVLPPGLQELSVSDNQLASLPALPSELCKLWAYNNQLTSL-P---MLPSGLQELSVS 189 (622)
T ss_dssp CC---CCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSCC-C---CCCTTCCEEECC
T ss_pred CC---CCCCcCEEECCCCCCCcCCCCCCCCCEEECcCCcCCCcCCccCCCCEEECCCCCCCCC-c---ccCCCCcEEECC
Confidence 44 678999999998765543445699999999999998775 467999999999999964 4 457999999999
Q ss_pred CCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeeccc
Q 041467 162 VNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMES 241 (746)
Q Consensus 162 ~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~ 241 (746)
+|.+++.+ . .+++|+.|++++|.++ .+|.. + ++|+.|++++|+|++ +| ..+++|+.|+|++
T Consensus 190 ~N~l~~l~-------~---~~~~L~~L~L~~N~l~-~l~~~---~-~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~ 250 (622)
T 3g06_A 190 DNQLASLP-------T---LPSELYKLWAYNNRLT-SLPAL---P-SGLKELIVSGNRLTS-LP---VLPSELKELMVSG 250 (622)
T ss_dssp SSCCSCCC-------C---CCTTCCEEECCSSCCS-SCCCC---C-TTCCEEECCSSCCSC-CC---CCCTTCCEEECCS
T ss_pred CCCCCCCC-------C---ccchhhEEECcCCccc-ccCCC---C-CCCCEEEccCCccCc-CC---CCCCcCcEEECCC
Confidence 99998632 2 2478999999999998 56643 2 379999999999996 66 4568999999999
Q ss_pred ccceecCCcCCCCCCCCceeecccccccccccccccccChHHhhhccCCCCCCccccCCCCCCeeeecCCcCccccchhh
Q 041467 242 SQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQI 321 (746)
Q Consensus 242 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 321 (746)
|+++ .+|. .+++|+.|+|++|+|+ .+|..|.++++|+.|+|++|.+++..|..+
T Consensus 251 N~L~-~lp~---~~~~L~~L~Ls~N~L~----------------------~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l 304 (622)
T 3g06_A 251 NRLT-SLPM---LPSGLLSLSVYRNQLT----------------------RLPESLIHLSSETTVNLEGNPLSERTLQAL 304 (622)
T ss_dssp SCCS-CCCC---CCTTCCEEECCSSCCC----------------------SCCGGGGGSCTTCEEECCSCCCCHHHHHHH
T ss_pred CCCC-cCCc---ccccCcEEeCCCCCCC----------------------cCCHHHhhccccCEEEecCCCCCCcCHHHH
Confidence 9998 4665 5789999999999887 567788899999999999999999999888
Q ss_pred hhcccc
Q 041467 322 LSVTTL 327 (746)
Q Consensus 322 ~~l~~l 327 (746)
..+...
T Consensus 305 ~~L~~~ 310 (622)
T 3g06_A 305 REITSA 310 (622)
T ss_dssp HHHHHS
T ss_pred Hhcccc
Confidence 777643
No 313
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.94 E-value=3.8e-26 Score=253.47 Aligned_cols=219 Identities=18% Similarity=0.141 Sum_probs=199.5
Q ss_pred ccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEc
Q 041467 18 TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRI 97 (746)
Q Consensus 18 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 97 (746)
++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|.++++|++|+|++|.+.+..+..|..+++|++|+|
T Consensus 75 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 154 (452)
T 3zyi_A 75 SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWL 154 (452)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEEC
T ss_pred CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEEC
Confidence 67999999999999888999999999999999999999888899999999999999999998777778999999999999
Q ss_pred cCCCCc----CcccCCCCCCEEeccCC-Ccc-----cccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCC
Q 041467 98 DCGGRI----DSLGHLKSLLLLSLAFN-QFL-----SLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGS 167 (746)
Q Consensus 98 ~~~~~~----~~~~~l~~L~~L~Ls~N-~l~-----~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 167 (746)
++|... ..|.++++|+.|+|++| .+. .|.++++|+.|+|++|++++. | .+..+++|++|+|++|.+++
T Consensus 155 ~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~Ls~N~l~~ 232 (452)
T 3zyi_A 155 RNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-P-NLTPLVGLEELEMSGNHFPE 232 (452)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-C-CCTTCTTCCEEECTTSCCSE
T ss_pred CCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-c-cccccccccEEECcCCcCcc
Confidence 987644 46889999999999994 443 467899999999999999965 3 58899999999999999987
Q ss_pred CCCCCccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccce
Q 041467 168 GTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLI 245 (746)
Q Consensus 168 ~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~ 245 (746)
..+..|.++++|+.|+|++|++++..|..|..++ +|+.|+|++|+|++..+..|..+++|+.|+|++|.+.
T Consensus 233 ------~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 233 ------IRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLA-SLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWN 303 (452)
T ss_dssp ------ECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCT-TCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEE
T ss_pred ------cCcccccCccCCCEEEeCCCcCceECHHHhcCCC-CCCEEECCCCcCCccChHHhccccCCCEEEccCCCcC
Confidence 4567899999999999999999998899999987 7999999999999877888999999999999999876
No 314
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.94 E-value=6.5e-26 Score=250.64 Aligned_cols=229 Identities=19% Similarity=0.168 Sum_probs=202.8
Q ss_pred CcccccCccccccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccch
Q 041467 5 NLLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILT 84 (746)
Q Consensus 5 ~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~ 84 (746)
++..+|... .+.+++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|.++++|++|+|++|++....+.
T Consensus 54 ~l~~iP~~~---~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~ 130 (440)
T 3zyj_A 54 NLREVPDGI---STNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNG 130 (440)
T ss_dssp CCSSCCSCC---CTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTT
T ss_pred CcCcCCCCC---CCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHh
Confidence 444555433 26799999999999988889999999999999999999988889999999999999999999877777
Q ss_pred hhcCCCCCCEEEccCCCCc----CcccCCCCCCEEeccCCC-cc-----cccCCCCCcEeeCccCcccccCCccccCCCC
Q 041467 85 EICSLFKLERLRIDCGGRI----DSLGHLKSLLLLSLAFNQ-FL-----SLSNASSLEMIEFSRNQFSGGVSVDFSRLKN 154 (746)
Q Consensus 85 ~~~~l~~L~~L~l~~~~~~----~~~~~l~~L~~L~Ls~N~-l~-----~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 154 (746)
.|..+++|++|++++|... ..|.++++|+.|+|++|+ +. .|.++++|+.|+|++|+++.. | .+..+++
T Consensus 131 ~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~ 208 (440)
T 3zyj_A 131 AFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLREI-P-NLTPLIK 208 (440)
T ss_dssp TSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSSC-C-CCTTCSS
T ss_pred HhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCccc-c-ccCCCcc
Confidence 8999999999999987643 468899999999999954 42 467899999999999999954 4 4889999
Q ss_pred CCEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCC
Q 041467 155 LSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNL 234 (746)
Q Consensus 155 L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L 234 (746)
|++|+|++|.+++ ..+..|.++++|+.|+|++|++++..|..|..++ +|+.|+|++|+|++..+..|..+++|
T Consensus 209 L~~L~Ls~N~l~~------~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L 281 (440)
T 3zyj_A 209 LDELDLSGNHLSA------IRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQ-SLVEINLAHNNLTLLPHDLFTPLHHL 281 (440)
T ss_dssp CCEEECTTSCCCE------ECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCT-TCCEEECTTSCCCCCCTTTTSSCTTC
T ss_pred cCEEECCCCccCc------cChhhhccCccCCEEECCCCceeEEChhhhcCCC-CCCEEECCCCCCCccChhHhccccCC
Confidence 9999999999987 3456789999999999999999998899999987 79999999999998888889999999
Q ss_pred Ceeecccccce
Q 041467 235 NWLTMESSQLI 245 (746)
Q Consensus 235 ~~L~L~~N~l~ 245 (746)
+.|+|++|.+.
T Consensus 282 ~~L~L~~Np~~ 292 (440)
T 3zyj_A 282 ERIHLHHNPWN 292 (440)
T ss_dssp CEEECCSSCEE
T ss_pred CEEEcCCCCcc
Confidence 99999999986
No 315
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.94 E-value=2.8e-27 Score=249.03 Aligned_cols=226 Identities=19% Similarity=0.246 Sum_probs=184.7
Q ss_pred ccEEecccCcC-cccCchhhh-------CCccCcEEecccCcCCccCCccc--cCCCCCCeeeCcCCCCCCccchhhcCC
Q 041467 20 LRYINLVNNGF-NGEIPHQIG-------RLISLERLILSNNSFSCAIPANL--SSGSNLIKLSTDSNNLVRDILTEICSL 89 (746)
Q Consensus 20 L~~L~Ls~N~l-~~~~p~~~~-------~l~~L~~L~Ls~N~l~~~~p~~~--~~l~~L~~L~L~~N~l~~~~~~~~~~l 89 (746)
|++|+|++|.+ ...+|..+. ++++|++|+|++|++++.+|..+ ..+++|++|+|++|.+.+. |..+..+
T Consensus 65 L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l 143 (312)
T 1wwl_A 65 IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAEL 143 (312)
T ss_dssp HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHH
T ss_pred HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHH
Confidence 89999999999 457888776 89999999999999999999987 8999999999999999776 6665543
Q ss_pred CCCCEEEccCCCCcCcccCCCCCCEEeccCCCcc-----cccCCCCCcEeeCccCccccc--CCccc--cCCCCCCEEEc
Q 041467 90 FKLERLRIDCGGRIDSLGHLKSLLLLSLAFNQFL-----SLSNASSLEMIEFSRNQFSGG--VSVDF--SRLKNLSWLNL 160 (746)
Q Consensus 90 ~~L~~L~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-----~l~~l~~L~~L~Ls~N~l~~~--~~~~~--~~l~~L~~L~L 160 (746)
.. ..+++|++|+|++|++. .+.++++|+.|+|++|++.+. .+..+ ..+++|++|+|
T Consensus 144 ~~---------------~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L 208 (312)
T 1wwl_A 144 QQ---------------WLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLAL 208 (312)
T ss_dssp HT---------------TCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEEC
T ss_pred HH---------------hhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEEC
Confidence 10 01256777777777773 456789999999999998765 23344 89999999999
Q ss_pred cCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCC-hhhhhcccccceEEcccCcccccCCccccCCCCCCeeec
Q 041467 161 GVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLP-HSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTM 239 (746)
Q Consensus 161 s~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L 239 (746)
++|.+++.+. .....+.++++|++|+|++|++++..| ..+..+. +|+.|++++|+|+ .+|..+. ++|++|+|
T Consensus 209 ~~N~l~~~~~---~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~-~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~L 281 (312)
T 1wwl_A 209 RNAGMETPSG---VCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPS-QLNSLNLSFTGLK-QVPKGLP--AKLSVLDL 281 (312)
T ss_dssp TTSCCCCHHH---HHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCT-TCCEEECTTSCCS-SCCSSCC--SEEEEEEC
T ss_pred CCCcCcchHH---HHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcC-CCCEEECCCCccC-hhhhhcc--CCceEEEC
Confidence 9999974210 112345688999999999999998775 3444555 7999999999999 6888777 89999999
Q ss_pred ccccceecCCcCCCCCCCCceeecccccccc
Q 041467 240 ESSQLIGTIPPLIGETPNLQLLNIGGNHLQG 270 (746)
Q Consensus 240 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 270 (746)
++|++++. |. +..+++|++|+|++|.+++
T Consensus 282 s~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 282 SYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp CSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred CCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 99999876 66 9999999999999999985
No 316
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.94 E-value=2.5e-26 Score=238.61 Aligned_cols=234 Identities=18% Similarity=0.148 Sum_probs=182.0
Q ss_pred cccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCC-CCCccchhhcCCCCCCEE
Q 041467 17 RTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNN-LVRDILTEICSLFKLERL 95 (746)
Q Consensus 17 ~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L 95 (746)
.++|++|+|++|.+++..+..|..+++|++|+|++|.+++..|..|.++++|++|++++|. +....|..+..+++
T Consensus 31 ~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~---- 106 (285)
T 1ozn_A 31 PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGR---- 106 (285)
T ss_dssp CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTT----
T ss_pred CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcC----
Confidence 4689999999999998777899999999999999999998889999999999999999997 65444555555544
Q ss_pred EccCCCCcCcccCCCCCCEEeccCCCcc-----cccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCC
Q 041467 96 RIDCGGRIDSLGHLKSLLLLSLAFNQFL-----SLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTA 170 (746)
Q Consensus 96 ~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-----~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 170 (746)
|+.|++++|++. .+.++++|++|++++|++++..+..|+.+++|++|+|++|.+++.
T Consensus 107 ----------------L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~-- 168 (285)
T 1ozn_A 107 ----------------LHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSV-- 168 (285)
T ss_dssp ----------------CCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEE--
T ss_pred ----------------CCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCccccc--
Confidence 555555555552 245678888888888888877777788899999999999988752
Q ss_pred CCccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCc
Q 041467 171 NELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPP 250 (746)
Q Consensus 171 ~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 250 (746)
.+..+..+++|+.|++++|.+++..|..+..++ +|+.|++++|++++..+..|..+++|++|++++|.+....+.
T Consensus 169 ----~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~ 243 (285)
T 1ozn_A 169 ----PERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLG-RLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRA 243 (285)
T ss_dssp ----CTTTTTTCTTCCEEECCSSCCCEECTTTTTTCT-TCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGG
T ss_pred ----CHHHhcCccccCEEECCCCcccccCHhHccCcc-cccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCc
Confidence 223577888999999999999888888888887 799999999999876667788999999999999988753322
Q ss_pred CCCCCCCCceeecccccccccccccccc
Q 041467 251 LIGETPNLQLLNIGGNHLQGSILSSLGN 278 (746)
Q Consensus 251 ~~~~l~~L~~L~Ls~N~l~~~~~~~l~~ 278 (746)
. .-...++.+..+.|.+....|..+..
T Consensus 244 ~-~~~~~l~~~~~~~~~~~c~~p~~l~g 270 (285)
T 1ozn_A 244 R-PLWAWLQKFRGSSSEVPCSLPQRLAG 270 (285)
T ss_dssp H-HHHHHHHHCCSEECCCBEEESGGGTT
T ss_pred H-HHHHHHHhcccccCccccCCchHhCC
Confidence 1 11123455556666666666655544
No 317
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.94 E-value=3e-27 Score=245.36 Aligned_cols=148 Identities=9% Similarity=0.009 Sum_probs=128.5
Q ss_pred cCCCCCCeEeecCCeeEEE---------EEeehhhhhh---hhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchh
Q 041467 480 NNFSPANKIREGGFNIVYN---------VAMKVANLKQ---KEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDF 547 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~---------vavK~~~~~~---~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 547 (746)
++|+..+.||+|+||.||+ ||||++.... ....+.+.+|++++++++|||||++++++.+.+..|+||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 6799999999999999997 8999987542 334577999999999999999999999999999999999
Q ss_pred hhccCCccc---ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCC
Q 041467 548 KAISNGQLR---LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTT 624 (746)
Q Consensus 548 e~~~~g~l~---~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~ 624 (746)
||+++++|. .......++..++.|++.||+|||++ +|+||||||+||+++.++.+||+++|
T Consensus 111 e~~~g~~L~~~l~~~~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~------------- 174 (286)
T 3uqc_A 111 EWIRGGSLQEVADTSPSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPA------------- 174 (286)
T ss_dssp ECCCEEEHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCC-------------
T ss_pred EecCCCCHHHHHhcCCChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEecc-------------
Confidence 999999886 33456678899999999999999999 99999999999999999999998432
Q ss_pred cccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 625 AETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 625 ~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
|++| + +.++|||||||++|
T Consensus 175 ---------------~~~~-------~---~~~~Di~slG~il~ 193 (286)
T 3uqc_A 175 ---------------TMPD-------A---NPQDDIRGIGASLY 193 (286)
T ss_dssp ---------------CCTT-------C---CHHHHHHHHHHHHH
T ss_pred ---------------ccCC-------C---CchhHHHHHHHHHH
Confidence 3433 2 34599999999998
No 318
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=1.3e-26 Score=258.96 Aligned_cols=215 Identities=19% Similarity=0.239 Sum_probs=185.0
Q ss_pred cccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEE
Q 041467 17 RTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLR 96 (746)
Q Consensus 17 ~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 96 (746)
.++|++|+|++|.+++..|..|+.+++|++|+|++|.+++..| |+.+++|++|+|++|.+.+..
T Consensus 33 ~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~-------------- 96 (487)
T 3oja_A 33 AWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-------------- 96 (487)
T ss_dssp GGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEE--------------
T ss_pred CCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCC--------------
Confidence 4589999999999998888999999999999999999997665 999999999999999874321
Q ss_pred ccCCCCcCcccCCCCCCEEeccCCCcccc--cCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCcc
Q 041467 97 IDCGGRIDSLGHLKSLLLLSLAFNQFLSL--SNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELD 174 (746)
Q Consensus 97 l~~~~~~~~~~~l~~L~~L~Ls~N~l~~l--~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 174 (746)
..++|+.|+|++|.+..+ ..+++|+.|+|++|+|++..|..|+.+++|++|+|++|.+++ .
T Consensus 97 -----------~~~~L~~L~L~~N~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~------~ 159 (487)
T 3oja_A 97 -----------VGPSIETLHAANNNISRVSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDT------V 159 (487)
T ss_dssp -----------ECTTCCEEECCSSCCCCEEECCCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCE------E
T ss_pred -----------CCCCcCEEECcCCcCCCCCccccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCC------c
Confidence 125677788888888543 357899999999999999999999999999999999999987 3
Q ss_pred cccccc-CCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCC
Q 041467 175 FINLLT-NCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIG 253 (746)
Q Consensus 175 ~~~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 253 (746)
.|..+. .+++|+.|+|++|.+++..+ +..++ +|+.|+|++|+|++ +|..|..+++|+.|+|++|.+.+ +|..++
T Consensus 160 ~~~~l~~~l~~L~~L~Ls~N~l~~~~~--~~~l~-~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~Ls~N~l~~-lp~~l~ 234 (487)
T 3oja_A 160 NFAELAASSDTLEHLNLQYNFIYDVKG--QVVFA-KLKTLDLSSNKLAF-MGPEFQSAAGVTWISLRNNKLVL-IEKALR 234 (487)
T ss_dssp EGGGGGGGTTTCCEEECTTSCCCEEEC--CCCCT-TCCEEECCSSCCCE-ECGGGGGGTTCSEEECTTSCCCE-ECTTCC
T ss_pred ChHHHhhhCCcccEEecCCCccccccc--cccCC-CCCEEECCCCCCCC-CCHhHcCCCCccEEEecCCcCcc-cchhhc
Confidence 455554 78999999999999987633 23455 79999999999997 55569999999999999999986 788899
Q ss_pred CCCCCceeeccccccc
Q 041467 254 ETPNLQLLNIGGNHLQ 269 (746)
Q Consensus 254 ~l~~L~~L~Ls~N~l~ 269 (746)
.+++|+.|++++|.+.
T Consensus 235 ~l~~L~~L~l~~N~l~ 250 (487)
T 3oja_A 235 FSQNLEHFDLRGNGFH 250 (487)
T ss_dssp CCTTCCEEECTTCCBC
T ss_pred cCCCCCEEEcCCCCCc
Confidence 9999999999999987
No 319
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.93 E-value=3.2e-27 Score=247.14 Aligned_cols=150 Identities=18% Similarity=0.252 Sum_probs=126.5
Q ss_pred hhcCCCCC-CeEeecCCeeEEE---------EEeehhhhhhhhhhHHHHHHHHHh-hcCCCCceeeEEEEEec----CCc
Q 041467 478 ATNNFSPA-NKIREGGFNIVYN---------VAMKVANLKQKEASRSFAAEFNAL-RNIRHRNLIKIITICSS----IDF 542 (746)
Q Consensus 478 ~~~~~~~~-~~ig~g~~g~v~~---------vavK~~~~~~~~~~~~~~~E~~~l-~~l~HpnIv~l~~~~~~----~~~ 542 (746)
..++|... +.||+|+||.||+ ||||++.. ...+.+|++++ +..+||||+++++++.. ...
T Consensus 15 ~~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-----~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~ 89 (299)
T 3m2w_A 15 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-----CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKC 89 (299)
T ss_dssp GGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-----SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEE
T ss_pred cccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-----cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCce
Confidence 34567666 7899999999996 89999852 34577899887 66689999999999877 667
Q ss_pred ccchhhhccCCccc-------ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCC---CCcEEEccccc
Q 041467 543 EGFDFKAISNGQLR-------LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQ---DVVTHVGDLGL 612 (746)
Q Consensus 543 ~~lv~e~~~~g~l~-------~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~---~~~~ki~DfGl 612 (746)
.++||||+++|+|. ...+++.++..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||+
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~ 166 (299)
T 3m2w_A 90 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGF 166 (299)
T ss_dssp EEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTT
T ss_pred EEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEecccc
Confidence 89999999999985 23589999999999999999999999 9999999999999997 78999999999
Q ss_pred cccccCCCCCCCcccccccccccccccccccccccccccccCCCccceeeccceee
Q 041467 613 AKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 613 a~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
|+... +..+ +.++||||+||++|
T Consensus 167 a~~~~------------------------------~~~~---~~~~DiwslG~il~ 189 (299)
T 3m2w_A 167 AKETT------------------------------GEKY---DKSCDMWSLGVIMY 189 (299)
T ss_dssp CEECT------------------------------TCGG---GGHHHHHHHHHHHH
T ss_pred ccccc------------------------------cccC---CchhhHHHHHHHHH
Confidence 87531 0123 33599999999998
No 320
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=1.1e-24 Score=225.17 Aligned_cols=220 Identities=20% Similarity=0.182 Sum_probs=162.2
Q ss_pred EEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEccCCC
Q 041467 22 YINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDCGG 101 (746)
Q Consensus 22 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~ 101 (746)
..+.++..+. .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|.+.+..+..+
T Consensus 11 ~~~c~~~~l~-~ip~~l~--~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~--------------- 72 (276)
T 2z62_A 11 TYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAY--------------- 72 (276)
T ss_dssp EEECTTSCCS-SCCSSSC--TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTT---------------
T ss_pred eEEecCCCcc-ccCCCCC--CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHc---------------
Confidence 4555555554 4555443 356677777777665555566666777777776666644333333
Q ss_pred CcCcccCCCCCCEEeccCCCcc-----cccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCcccc
Q 041467 102 RIDSLGHLKSLLLLSLAFNQFL-----SLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFI 176 (746)
Q Consensus 102 ~~~~~~~l~~L~~L~Ls~N~l~-----~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 176 (746)
.++++|+.|+|++|++. .+.++++|++|++++|++++..+..|+.+++|++|+|++|.+++. .+|
T Consensus 73 -----~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~-----~l~ 142 (276)
T 2z62_A 73 -----QSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSF-----KLP 142 (276)
T ss_dssp -----TTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCC-----CCC
T ss_pred -----cCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCcccee-----cCc
Confidence 33344444444444442 345677888888888888887777899999999999999998762 256
Q ss_pred ccccCCCCCCEEEcccccccccCChhhhhcccccc----eEEcccCcccccCCccccCCCCCCeeecccccceecCCcCC
Q 041467 177 NLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIK----QIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLI 252 (746)
Q Consensus 177 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~----~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~ 252 (746)
..+.++++|+.|++++|++++..+..+..+. .|+ .|++++|++++..+..+. ..+|++|+|++|++++..+..|
T Consensus 143 ~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~-~L~~l~l~L~ls~n~l~~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~ 220 (276)
T 2z62_A 143 EYFSNLTNLEHLDLSSNKIQSIYCTDLRVLH-QMPLLNLSLDLSLNPMNFIQPGAFK-EIRLKELALDTNQLKSVPDGIF 220 (276)
T ss_dssp GGGGGCTTCCEEECCSSCCCEECGGGGHHHH-TCTTCCEEEECCSSCCCEECTTSSC-SCCEEEEECCSSCCSCCCTTTT
T ss_pred hhhccCCCCCEEECCCCCCCcCCHHHhhhhh-hccccceeeecCCCcccccCccccC-CCcccEEECCCCceeecCHhHh
Confidence 7788999999999999999988778888876 577 899999999976555554 4589999999999998777778
Q ss_pred CCCCCCceeeccccccccc
Q 041467 253 GETPNLQLLNIGGNHLQGS 271 (746)
Q Consensus 253 ~~l~~L~~L~Ls~N~l~~~ 271 (746)
..+++|+.|+|++|.+.+.
T Consensus 221 ~~l~~L~~L~l~~N~~~c~ 239 (276)
T 2z62_A 221 DRLTSLQKIWLHTNPWDCS 239 (276)
T ss_dssp TTCCSCCEEECCSSCBCCC
T ss_pred cccccccEEEccCCccccc
Confidence 9999999999999999854
No 321
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.92 E-value=2.3e-24 Score=221.81 Aligned_cols=218 Identities=18% Similarity=0.206 Sum_probs=171.3
Q ss_pred CCcccccCccccccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccc
Q 041467 4 NNLLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDIL 83 (746)
Q Consensus 4 n~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~ 83 (746)
+..+.|....|.....++++++++++++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|.+....+
T Consensus 2 ~~~C~~~~~~C~c~~~~~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~ 78 (270)
T 2o6q_A 2 EALCKKDGGVCSCNNNKNSVDCSSKKLT-AIPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPA 78 (270)
T ss_dssp CCCBGGGTCSBEEETTTTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCT
T ss_pred CccCCCCCCCCEeCCCCCEEEccCCCCC-ccCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeCh
Confidence 4567777777876677899999999998 6787664 689999999999997777789999999999999998854332
Q ss_pred hhhcCCCCCCEEEccCCCCcCcccCCCCCCEEeccCCCcccccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCC
Q 041467 84 TEICSLFKLERLRIDCGGRIDSLGHLKSLLLLSLAFNQFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVN 163 (746)
Q Consensus 84 ~~~~~l~~L~~L~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 163 (746)
.. |.++++|++|+|++|++++..+..|..+++|++|+|++|
T Consensus 79 ~~---------------------------------------~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 119 (270)
T 2o6q_A 79 GI---------------------------------------FKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRN 119 (270)
T ss_dssp TT---------------------------------------TSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSS
T ss_pred hh---------------------------------------hcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCC
Confidence 22 223455566666666777666667778888888888888
Q ss_pred CCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeeccccc
Q 041467 164 NLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQ 243 (746)
Q Consensus 164 ~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~ 243 (746)
.++..+ +..|..+++|++|+|++|.+++..+..|..++ +|+.|++++|++++..+..|.++++|++|+|++|+
T Consensus 120 ~l~~~~------~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~-~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~ 192 (270)
T 2o6q_A 120 QLKSLP------PRVFDSLTKLTYLSLGYNELQSLPKGVFDKLT-SLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQ 192 (270)
T ss_dssp CCCCCC------TTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT-TCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSC
T ss_pred ccCeeC------HHHhCcCcCCCEEECCCCcCCccCHhHccCCc-ccceeEecCCcCcEeChhHhccCCCcCEEECCCCc
Confidence 887632 34467788888888888888765555577776 68888888888887767778889999999999999
Q ss_pred ceecCCcCCCCCCCCceeecccccccc
Q 041467 244 LIGTIPPLIGETPNLQLLNIGGNHLQG 270 (746)
Q Consensus 244 l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 270 (746)
+.+..+..|..+++|+.|+|++|.+..
T Consensus 193 l~~~~~~~~~~l~~L~~L~l~~N~~~c 219 (270)
T 2o6q_A 193 LKRVPEGAFDSLEKLKMLQLQENPWDC 219 (270)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CCcCCHHHhccccCCCEEEecCCCeeC
Confidence 987777778889999999999998864
No 322
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.92 E-value=3.7e-24 Score=221.08 Aligned_cols=221 Identities=20% Similarity=0.163 Sum_probs=147.7
Q ss_pred cEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEccCCCCcCcccCCCCCCEEeccCCCcc-
Q 041467 45 ERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDCGGRIDSLGHLKSLLLLSLAFNQFL- 123 (746)
Q Consensus 45 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~l~~L~~L~Ls~N~l~- 123 (746)
...+.++..++ .+|..+. ++|++|++++|.+.+..+..+ .++++|++|+|++|++.
T Consensus 10 ~~~~c~~~~l~-~ip~~l~--~~l~~L~ls~n~l~~~~~~~~--------------------~~l~~L~~L~l~~n~l~~ 66 (276)
T 2z62_A 10 ITYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSF--------------------FSFPELQVLDLSRCEIQT 66 (276)
T ss_dssp TEEECTTSCCS-SCCSSSC--TTCCEEECTTCCCCEECTTTT--------------------TTCTTCSEEECTTCCCCE
T ss_pred ceEEecCCCcc-ccCCCCC--CCccEEECCCCcccccCHhHh--------------------ccccCCcEEECCCCcCCc
Confidence 35677777777 5787765 589999999999866544444 44455555556666552
Q ss_pred ----cccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEccccccccc-
Q 041467 124 ----SLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGV- 198 (746)
Q Consensus 124 ----~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~- 198 (746)
.|.++++|++|+|++|++++..+..|.++++|++|++++|.+++.. +..+..+++|++|++++|.+++.
T Consensus 67 ~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~------~~~~~~l~~L~~L~l~~n~l~~~~ 140 (276)
T 2z62_A 67 IEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLE------NFPIGHLKTLKELNVAHNLIQSFK 140 (276)
T ss_dssp ECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCST------TCCCTTCTTCCEEECCSSCCCCCC
T ss_pred cCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccC------chhcccCCCCCEEECcCCccceec
Confidence 3556778888888888887777777778888888888888776532 22366777788888887777653
Q ss_pred CChhhhhcccccceEEcccCcccccCCccccCCCCCC----eeecccccceecCCcCCCCCCCCceeecccccccccccc
Q 041467 199 LPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLN----WLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILS 274 (746)
Q Consensus 199 ~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~----~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~ 274 (746)
+|..+..++ +|+.|++++|++++..+..|..+.+|+ .|++++|.+.+..+..+. ..+|+.|+|++|++++
T Consensus 141 l~~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~-~~~L~~L~L~~n~l~~---- 214 (276)
T 2z62_A 141 LPEYFSNLT-NLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFK-EIRLKELALDTNQLKS---- 214 (276)
T ss_dssp CCGGGGGCT-TCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSC-SCCEEEEECCSSCCSC----
T ss_pred CchhhccCC-CCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCccccC-CCcccEEECCCCceee----
Confidence 577777776 677777777777766666666655555 667777777655444443 3367777777666652
Q ss_pred cccccChHHhhhccCCCCCCccccCCCCCCeeeecCCcCcccc
Q 041467 275 SLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTL 317 (746)
Q Consensus 275 ~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 317 (746)
..+..|..+++|+.|+|++|.+++..
T Consensus 215 -----------------~~~~~~~~l~~L~~L~l~~N~~~c~c 240 (276)
T 2z62_A 215 -----------------VPDGIFDRLTSLQKIWLHTNPWDCSC 240 (276)
T ss_dssp -----------------CCTTTTTTCCSCCEEECCSSCBCCCT
T ss_pred -----------------cCHhHhcccccccEEEccCCcccccC
Confidence 22233456666777777777766543
No 323
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=2.2e-24 Score=222.24 Aligned_cols=201 Identities=18% Similarity=0.190 Sum_probs=145.1
Q ss_pred ccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEc
Q 041467 18 TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRI 97 (746)
Q Consensus 18 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 97 (746)
..+..+++..+.+.... .+..+++|+.|++++|.++. + ..+..+++|++|++++|.+.+.
T Consensus 19 ~~l~~l~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~~---------------- 78 (272)
T 3rfs_A 19 AETIKANLKKKSVTDAV--TQNELNSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHDI---------------- 78 (272)
T ss_dssp HHHHHHHHTCSCTTSEE--CHHHHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCCC----------------
T ss_pred HHHHHHHhcCccccccc--ccccccceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCCc----------------
Confidence 34555666666665332 34566777777777777763 3 2466677777777777765331
Q ss_pred cCCCCcCcccCCCCCCEEeccCCCcccccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccc
Q 041467 98 DCGGRIDSLGHLKSLLLLSLAFNQFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFIN 177 (746)
Q Consensus 98 ~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~ 177 (746)
..+.++++|++|+|++|++++..+..|..+++|++|+|++|.+++. .+.
T Consensus 79 -------------------------~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~------~~~ 127 (272)
T 3rfs_A 79 -------------------------SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSL------PDG 127 (272)
T ss_dssp -------------------------GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCC------CTT
T ss_pred -------------------------hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCcc------CHH
Confidence 1234556677777777777777777778888888888888888763 234
Q ss_pred cccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCC
Q 041467 178 LLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPN 257 (746)
Q Consensus 178 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 257 (746)
.|..+++|++|++++|++++..|..+..++ +|+.|++++|++++..+..|+.+++|++|++++|++.+..|..+..+++
T Consensus 128 ~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 206 (272)
T 3rfs_A 128 VFDKLTNLTYLNLAHNQLQSLPKGVFDKLT-NLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTS 206 (272)
T ss_dssp TTTTCTTCCEEECCSSCCCCCCTTTTTTCT-TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTT
T ss_pred HhccCCCCCEEECCCCccCccCHHHhccCc-cCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcC
Confidence 467788888888888888866666667776 6888888888888777777888888888888888888877777888888
Q ss_pred Cceeecccccccc
Q 041467 258 LQLLNIGGNHLQG 270 (746)
Q Consensus 258 L~~L~Ls~N~l~~ 270 (746)
|+.|+|++|.+.+
T Consensus 207 L~~L~l~~N~~~~ 219 (272)
T 3rfs_A 207 LQYIWLHDNPWDC 219 (272)
T ss_dssp CCEEECCSSCBCC
T ss_pred CCEEEccCCCccc
Confidence 8888888887764
No 324
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=1.3e-23 Score=216.32 Aligned_cols=210 Identities=20% Similarity=0.217 Sum_probs=165.0
Q ss_pred cccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCE
Q 041467 15 ILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLER 94 (746)
Q Consensus 15 ~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 94 (746)
..+++|+.|++++|.++ .++ .+..+++|++|+|++|.+++ + ..+..+++|++|+|++|.+.+..+..+
T Consensus 38 ~~l~~L~~L~l~~~~i~-~~~-~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~l~~~~~~~~-------- 105 (272)
T 3rfs_A 38 NELNSIDQIIANNSDIK-SVQ-GIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLILTGNQLQSLPNGVF-------- 105 (272)
T ss_dssp HHHTTCCEEECTTSCCC-CCT-TGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTTSCCCCCCTTTT--------
T ss_pred ccccceeeeeeCCCCcc-ccc-ccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCCCccCccChhHh--------
Confidence 34788999999999997 444 58999999999999999986 3 489999999999999998865544333
Q ss_pred EEccCCCCcCcccCCCCCCEEeccCCCcccccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCcc
Q 041467 95 LRIDCGGRIDSLGHLKSLLLLSLAFNQFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELD 174 (746)
Q Consensus 95 L~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 174 (746)
.++++|++|+|++|++++..+..|+.+++|++|+|++|.+++.+
T Consensus 106 -------------------------------~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~----- 149 (272)
T 3rfs_A 106 -------------------------------DKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLP----- 149 (272)
T ss_dssp -------------------------------TTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC-----
T ss_pred -------------------------------cCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccC-----
Confidence 34455666667777777777777888888888888888887632
Q ss_pred ccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCC
Q 041467 175 FINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGE 254 (746)
Q Consensus 175 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 254 (746)
+..+..+++|+.|++++|++++..|..+..++ +|+.|++++|++++..|..|+.+++|++|++++|.+.+ .
T Consensus 150 -~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~-------~ 220 (272)
T 3rfs_A 150 -KGVFDKLTNLTELDLSYNQLQSLPEGVFDKLT-QLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC-------T 220 (272)
T ss_dssp -TTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT-TCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC-------C
T ss_pred -HHHhccCccCCEEECCCCCcCccCHHHhcCCc-cCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCccc-------c
Confidence 34467788888888888888876666677776 68888888888888777778888999999999887764 3
Q ss_pred CCCCceeecccccccccccccccccCh
Q 041467 255 TPNLQLLNIGGNHLQGSILSSLGNLTL 281 (746)
Q Consensus 255 l~~L~~L~Ls~N~l~~~~~~~l~~l~~ 281 (746)
+++|+.|+++.|.++|.+|.+++.+..
T Consensus 221 ~~~l~~l~~~~n~~~g~ip~~~~~~~~ 247 (272)
T 3rfs_A 221 CPGIRYLSEWINKHSGVVRNSAGSVAP 247 (272)
T ss_dssp TTTTHHHHHHHHHTGGGBBCTTSCBCG
T ss_pred CcHHHHHHHHHHhCCCcccCcccccCC
Confidence 557888888888888888877766543
No 325
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.91 E-value=9.4e-26 Score=259.40 Aligned_cols=380 Identities=16% Similarity=0.101 Sum_probs=249.3
Q ss_pred cccccccccEEecccCcC---cccCchhhh------------CCccCcEEecccCcCCccCCccccCC--CCCCeeeCcC
Q 041467 13 LCILRTFLRYINLVNNGF---NGEIPHQIG------------RLISLERLILSNNSFSCAIPANLSSG--SNLIKLSTDS 75 (746)
Q Consensus 13 ~~~~~~~L~~L~Ls~N~l---~~~~p~~~~------------~l~~L~~L~Ls~N~l~~~~p~~~~~l--~~L~~L~L~~ 75 (746)
.+..+++|++|+|+++.. .+.+|..++ .+++|++|+|++|.+++..+..++.. .+|++|+|++
T Consensus 68 ~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~ 147 (592)
T 3ogk_B 68 LSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDK 147 (592)
T ss_dssp HHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEES
T ss_pred HHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCCeEEeeccEecHHHHHHHHHhccccCcEEECcC
Confidence 344578899999987532 123333332 78899999999998887666666663 4599999988
Q ss_pred CCCCC--ccchhhcCCCCCCEEEccCCCCc--------CcccCCCCCCEEeccCCCcc-----c----ccCCCCCcEeeC
Q 041467 76 NNLVR--DILTEICSLFKLERLRIDCGGRI--------DSLGHLKSLLLLSLAFNQFL-----S----LSNASSLEMIEF 136 (746)
Q Consensus 76 N~l~~--~~~~~~~~l~~L~~L~l~~~~~~--------~~~~~l~~L~~L~Ls~N~l~-----~----l~~l~~L~~L~L 136 (746)
|.-.. .++.....+++|++|+|+.+... ..+.++++|+.|++++|.+. . +.++++|+.|++
T Consensus 148 ~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L 227 (592)
T 3ogk_B 148 CSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKV 227 (592)
T ss_dssp CEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEEC
T ss_pred CCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEec
Confidence 86211 12333457889999999876532 23457889999999999885 1 246789999999
Q ss_pred ccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcc
Q 041467 137 SRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMG 216 (746)
Q Consensus 137 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~ 216 (746)
++|.+.+ ++..+..+++|+.|+++.+...... ...+..+..+++|+.|+++++.. +.+|..+..++ +|++|+++
T Consensus 228 ~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~---~~~~~~l~~~~~L~~L~l~~~~~-~~l~~~~~~~~-~L~~L~Ls 301 (592)
T 3ogk_B 228 GDFEILE-LVGFFKAAANLEEFCGGSLNEDIGM---PEKYMNLVFPRKLCRLGLSYMGP-NEMPILFPFAA-QIRKLDLL 301 (592)
T ss_dssp SSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTC---TTSSSCCCCCTTCCEEEETTCCT-TTGGGGGGGGG-GCCEEEET
T ss_pred cCccHHH-HHHHHhhhhHHHhhcccccccccch---HHHHHHhhccccccccCccccch-hHHHHHHhhcC-CCcEEecC
Confidence 9999886 5677888999999999863322100 12334566778888888877643 35666666665 68888888
Q ss_pred cCcccccCC-ccccCCCCCCeeecccccceecCCcCCCCCCCCceeecc-----------cccccccc----cccccccC
Q 041467 217 SNRISSTIP-HGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIG-----------GNHLQGSI----LSSLGNLT 280 (746)
Q Consensus 217 ~N~i~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls-----------~N~l~~~~----~~~l~~l~ 280 (746)
+|.+++... ..+..+++|+.|+++++-..+.++..+..+++|++|+|+ .|.+++.. ...+.+|+
T Consensus 302 ~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~ 381 (592)
T 3ogk_B 302 YALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELE 381 (592)
T ss_dssp TCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCS
T ss_pred CCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCe
Confidence 888764333 335778888888887333233344444567778888888 35665432 22345666
Q ss_pred hHHhhhccCCCCCCccccC-CCCCCeeeec----CCcCccc-----cchhhhhcccccceEEccCc--cccccCchhhhc
Q 041467 281 LQTYLFNNLQGNIPSSLAN-CKSLLGLSVS----HNKLTST-----LPQQILSVTTLSLYLELDNN--LLNGSLPPEVGN 348 (746)
Q Consensus 281 ~l~~l~n~l~~~~p~~~~~-l~~L~~L~Ls----~N~l~~~-----~p~~~~~l~~l~~~L~Ls~N--~l~~~~p~~~~~ 348 (746)
.|.+..|++++..+..++. +++|+.|+++ .|++++. ++..+..+++| +.|+++++ .+++..+..++.
T Consensus 382 ~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L-~~L~L~~~~~~l~~~~~~~~~~ 460 (592)
T 3ogk_B 382 YMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKL-RRFAFYLRQGGLTDLGLSYIGQ 460 (592)
T ss_dssp EEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTC-CEEEEECCGGGCCHHHHHHHHH
T ss_pred EEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCC-CEEEEecCCCCccHHHHHHHHH
Confidence 6666566676665556655 7778888885 6677642 44445667777 56777643 356555555543
Q ss_pred -ccCCceeecCC----------CCCCCCCCCEEEccCCcCcccC-CC-CCccCCCCeeeEecCC
Q 041467 349 -LKNLLRLHIPE----------YPENLSFFELLNLSYNYFGSEV-PT-KGVFNNKTRFSIIGNG 399 (746)
Q Consensus 349 -l~~L~~L~lp~----------~~~~l~~L~~L~ls~N~l~~~~-p~-~~~~~~~~~~~~~~n~ 399 (746)
+++|+.|++.. ....+++|+.|++++|.+++.. +. ...+.++..+++.+|.
T Consensus 461 ~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~ 524 (592)
T 3ogk_B 461 YSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYR 524 (592)
T ss_dssp SCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCB
T ss_pred hCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCc
Confidence 67777776533 2245678888888888876542 21 1235667777777775
No 326
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.91 E-value=4.7e-25 Score=237.15 Aligned_cols=269 Identities=14% Similarity=0.177 Sum_probs=181.6
Q ss_pred EEecccCcCcccCchhhhCCccCcEEecccCcCCccCC----ccccCCC-CCCeeeCcCCCCCCccchhhcCCCCCCEEE
Q 041467 22 YINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIP----ANLSSGS-NLIKLSTDSNNLVRDILTEICSLFKLERLR 96 (746)
Q Consensus 22 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p----~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 96 (746)
+++|++|.+++.+|..+...++|++|||++|.|++..+ ..|..++ +|++|+|++|.+.+..+..+..+
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~------- 74 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQI------- 74 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHH-------
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHH-------
Confidence 57888999988888887777779999999999886655 6777888 89999999998876666555432
Q ss_pred ccCCCCcCcccCC-CCCCEEeccCCCccc---------ccCC-CCCcEeeCccCcccccCCcccc----C-CCCCCEEEc
Q 041467 97 IDCGGRIDSLGHL-KSLLLLSLAFNQFLS---------LSNA-SSLEMIEFSRNQFSGGVSVDFS----R-LKNLSWLNL 160 (746)
Q Consensus 97 l~~~~~~~~~~~l-~~L~~L~Ls~N~l~~---------l~~l-~~L~~L~Ls~N~l~~~~~~~~~----~-l~~L~~L~L 160 (746)
+... ++|++|+|++|++.. +..+ ++|+.|+|++|+|++..+..+. . .++|++|+|
T Consensus 75 ---------l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~L 145 (362)
T 3goz_A 75 ---------LAAIPANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNL 145 (362)
T ss_dssp ---------HHTSCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEEC
T ss_pred ---------HhccCCCccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEc
Confidence 1222 566666666666632 3344 6788888888888766554433 3 258888888
Q ss_pred cCCCCCCCCCCCccccccccCCC-CCCEEEcccccccccCChhhhhc----ccccceEEcccCccccc----CCccccC-
Q 041467 161 GVNNLGSGTANELDFINLLTNCS-KLERLYFNRNGFEGVLPHSIANL----SSTIKQIAMGSNRISST----IPHGIRN- 230 (746)
Q Consensus 161 s~N~l~~~~~~~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l----~~~L~~L~l~~N~i~~~----~p~~~~~- 230 (746)
++|.++..... .++..+..++ +|++|+|++|++++..+..+... +.+|+.|++++|.|++. ++..+..
T Consensus 146 s~N~l~~~~~~--~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~ 223 (362)
T 3goz_A 146 RGNDLGIKSSD--ELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSI 223 (362)
T ss_dssp TTSCGGGSCHH--HHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHS
T ss_pred cCCcCCHHHHH--HHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcC
Confidence 88887642211 2344455555 78888888888876666555543 12688888888888752 4445554
Q ss_pred CCCCCeeecccccceecCC----cCCCCCCCCceeecccccccccccccccccChHHhhhccCCCCCCccccCCCCCCee
Q 041467 231 LVNLNWLTMESSQLIGTIP----PLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGL 306 (746)
Q Consensus 231 l~~L~~L~L~~N~l~~~~p----~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L 306 (746)
.++|++|+|++|.+.+..+ ..+..+++|+.|+|++|.+.+..+..+. .++..+..+++|+.|
T Consensus 224 ~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~--------------~l~~~~~~l~~L~~L 289 (362)
T 3goz_A 224 PNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCK--------------ALGAAFPNIQKIILV 289 (362)
T ss_dssp CTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHH--------------HHHTTSTTCCEEEEE
T ss_pred CCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHH--------------HHHHHhccCCceEEE
Confidence 3478888888888765433 3456778888888888886643332221 233455677778888
Q ss_pred eecCCcCccccchhhh
Q 041467 307 SVSHNKLTSTLPQQIL 322 (746)
Q Consensus 307 ~Ls~N~l~~~~p~~~~ 322 (746)
|+++|++.+..|..+.
T Consensus 290 dL~~N~l~~~~~~~~~ 305 (362)
T 3goz_A 290 DKNGKEIHPSHSIPIS 305 (362)
T ss_dssp CTTSCBCCGGGCHHHH
T ss_pred ecCCCcCCCcchHHHH
Confidence 8888888766554443
No 327
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.90 E-value=3.9e-23 Score=214.61 Aligned_cols=202 Identities=20% Similarity=0.226 Sum_probs=154.9
Q ss_pred cccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCE
Q 041467 15 ILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLER 94 (746)
Q Consensus 15 ~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 94 (746)
..+++++.+++++|.++ .+|..+. ++|++|+|++|+|++..|..|.++++|+.|+|++|.+.+. +.
T Consensus 7 ~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~---------- 72 (290)
T 1p9a_G 7 SKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKL-QV---------- 72 (290)
T ss_dssp ECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEE-EC----------
T ss_pred cccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcc-cC----------
Confidence 45778888888888887 5666554 5788888888888877777888888888888888876432 11
Q ss_pred EEccCCCCcCcccCCCCCCEEeccCCCcccccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCcc
Q 041467 95 LRIDCGGRIDSLGHLKSLLLLSLAFNQFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELD 174 (746)
Q Consensus 95 L~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 174 (746)
...+++|++|+|++|+|+ .+|..+..+++|++|+|++|++++.+
T Consensus 73 ------------------------------~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~----- 116 (290)
T 1p9a_G 73 ------------------------------DGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLP----- 116 (290)
T ss_dssp ------------------------------CSCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCC-----
T ss_pred ------------------------------CCCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccC-----
Confidence 123455666666666666 45666777888888888888887632
Q ss_pred ccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCC
Q 041467 175 FINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGE 254 (746)
Q Consensus 175 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 254 (746)
+..|.++++|++|+|++|++++..+..|..++ +|+.|++++|+|++..+..|..+++|+.|+|++|++. .+|..+..
T Consensus 117 -~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~ 193 (290)
T 1p9a_G 117 -LGALRGLGELQELYLKGNELKTLPPGLLTPTP-KLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFG 193 (290)
T ss_dssp -SSTTTTCTTCCEEECTTSCCCCCCTTTTTTCT-TCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTT
T ss_pred -HHHHcCCCCCCEEECCCCCCCccChhhccccc-CCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcc
Confidence 34577788888888888888866666667776 6889999999998766667888999999999999997 67888888
Q ss_pred CCCCceeeccccccc
Q 041467 255 TPNLQLLNIGGNHLQ 269 (746)
Q Consensus 255 l~~L~~L~Ls~N~l~ 269 (746)
+++|+.|+|++|.+.
T Consensus 194 ~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 194 SHLLPFAFLHGNPWL 208 (290)
T ss_dssp TCCCSEEECCSCCBC
T ss_pred cccCCeEEeCCCCcc
Confidence 889999999999886
No 328
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.90 E-value=5.2e-23 Score=213.70 Aligned_cols=180 Identities=18% Similarity=0.203 Sum_probs=88.6
Q ss_pred hhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEccCCCCcCcccCCCCCCEEec
Q 041467 38 IGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDCGGRIDSLGHLKSLLLLSL 117 (746)
Q Consensus 38 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~l~~L~~L~L 117 (746)
++++++|+++++++|.++ .+|..+. ++|+.|+|++|.+.+..+..|
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~N~l~~~~~~~~------------------------------- 51 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP--KDTTILHLSENLLYTFSLATL------------------------------- 51 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC--TTCCEEECTTSCCSEEEGGGG-------------------------------
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC--CCCCEEEcCCCcCCccCHHHh-------------------------------
Confidence 455666777777777766 3554443 456666666665543333322
Q ss_pred cCCCcccccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccc
Q 041467 118 AFNQFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEG 197 (746)
Q Consensus 118 s~N~l~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~ 197 (746)
.++++|+.|+|++|+|++..+. +.+++|++|+|++|.++. +|..+..+++|++|+|++|++++
T Consensus 52 --------~~l~~L~~L~L~~n~l~~~~~~--~~l~~L~~L~Ls~N~l~~-------l~~~~~~l~~L~~L~l~~N~l~~ 114 (290)
T 1p9a_G 52 --------MPYTRLTQLNLDRAELTKLQVD--GTLPVLGTLDLSHNQLQS-------LPLLGQTLPALTVLDVSFNRLTS 114 (290)
T ss_dssp --------TTCTTCCEEECTTSCCCEEECC--SCCTTCCEEECCSSCCSS-------CCCCTTTCTTCCEEECCSSCCCC
T ss_pred --------hcCCCCCEEECCCCccCcccCC--CCCCcCCEEECCCCcCCc-------CchhhccCCCCCEEECCCCcCcc
Confidence 2233334444444444433221 455566666666665543 23334455555555555555554
Q ss_pred cCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCCCceeeccccccc
Q 041467 198 VLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQ 269 (746)
Q Consensus 198 ~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 269 (746)
..|..|..+. +|+.|++++|+|++..+..|..+++|+.|+|++|++++..+..|..+++|+.|+|++|+++
T Consensus 115 l~~~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~ 185 (290)
T 1p9a_G 115 LPLGALRGLG-ELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY 185 (290)
T ss_dssp CCSSTTTTCT-TCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC
T ss_pred cCHHHHcCCC-CCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC
Confidence 4444444444 3555555555554443444444444444444444444333333444444444444444443
No 329
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.90 E-value=5e-25 Score=248.13 Aligned_cols=171 Identities=16% Similarity=0.096 Sum_probs=123.9
Q ss_pred CCCCeEeecCCeeEEE-------EEeehhhhh--------hhhhhHHHHHHHHHhhcCCCCceeeEEEEEecCCcccchh
Q 041467 483 SPANKIREGGFNIVYN-------VAMKVANLK--------QKEASRSFAAEFNALRNIRHRNLIKIITICSSIDFEGFDF 547 (746)
Q Consensus 483 ~~~~~ig~g~~g~v~~-------vavK~~~~~--------~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 547 (746)
...+.||+|+||.||+ +|+|+...+ .....+++.+|++++++++|||||++..++...+..++||
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVm 418 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSYLDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMM 418 (540)
T ss_dssp ---------CCEEEEEEECSSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEE
T ss_pred CCCCEEeeCCCEEEEEEEECCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEE
Confidence 4567999999999995 788764321 1223456899999999999999996666666777889999
Q ss_pred hhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEEccccccccccCCCCCCCccc
Q 041467 548 KAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAET 627 (746)
Q Consensus 548 e~~~~g~l~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~ 627 (746)
||+++|+|....-. +..++.|+++|++|||++ +|+||||||+|||++. .+||+|||+|+.......... ..
T Consensus 419 E~~~ggsL~~~l~~---~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~~~~-~~ 489 (540)
T 3en9_A 419 SYINGKLAKDVIED---NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDEDKAV-DL 489 (540)
T ss_dssp ECCCSEEHHHHSTT---CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEECCCHHHHHH-HH
T ss_pred ECCCCCCHHHHHHH---HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEECCCcccccc-ch
Confidence 99999998622111 778999999999999999 9999999999999998 999999999987632110000 00
Q ss_pred ccccccccccccccccccccc--cccccCCCccceeeccc
Q 041467 628 ASSSIGINGTVGYVAPVIIAA--RNLENREKRHTVMSFPQ 665 (746)
Q Consensus 628 ~~~~~~~~gt~~Y~aPE~~~~--~~~~~~~~~~DiwSlG~ 665 (746)
.......+||+.|||||++.. ..|+.. +|+||.+.
T Consensus 490 ~~~~~~~~GT~~y~APEv~~~~~~~Y~~~---~d~ws~vl 526 (540)
T 3en9_A 490 IVFKKAVLSTHHEKFDEIWERFLEGYKSV---YDRWEIIL 526 (540)
T ss_dssp HHHHHHHHHHCGGGHHHHHHHHHHHHHHH---CTTHHHHH
T ss_pred hhhhhhhcCCCCcCCHHHHHHHHHHHHHH---HhHHHHHH
Confidence 001235789999999999987 455544 89998765
No 330
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.90 E-value=1.2e-24 Score=234.00 Aligned_cols=256 Identities=17% Similarity=0.166 Sum_probs=189.2
Q ss_pred CCCcccccCccccc-cccccEEecccCcCcccCc----hhhhCCc-cCcEEecccCcCCccCCccccCC-----CCCCee
Q 041467 3 SNNLLQYSKPLCIL-RTFLRYINLVNNGFNGEIP----HQIGRLI-SLERLILSNNSFSCAIPANLSSG-----SNLIKL 71 (746)
Q Consensus 3 ~n~~~~~~~~~~~~-~~~L~~L~Ls~N~l~~~~p----~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L 71 (746)
+.+-.+.+.|.+.. .++|++|||++|.+++..+ +.|..++ +|++|+|++|.|++..+..|..+ ++|++|
T Consensus 6 s~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L 85 (362)
T 3goz_A 6 TLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSL 85 (362)
T ss_dssp CCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEE
T ss_pred ccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEE
Confidence 34445555565554 4559999999999987766 7888998 99999999999998778888775 999999
Q ss_pred eCcCCCCCCccchhhcCCCCCCEEEccCCCCcCcccCC-CCCCEEeccCCCcccc---------cC-CCCCcEeeCccCc
Q 041467 72 STDSNNLVRDILTEICSLFKLERLRIDCGGRIDSLGHL-KSLLLLSLAFNQFLSL---------SN-ASSLEMIEFSRNQ 140 (746)
Q Consensus 72 ~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~l-~~L~~L~Ls~N~l~~l---------~~-l~~L~~L~Ls~N~ 140 (746)
+|++|.+.+..+..+.. .+..+ ++|+.|+|++|++... .. .++|++|+|++|+
T Consensus 86 ~Ls~n~l~~~~~~~l~~----------------~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~ 149 (362)
T 3goz_A 86 NLSGNFLSYKSSDELVK----------------TLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGND 149 (362)
T ss_dssp ECCSSCGGGSCHHHHHH----------------HHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSC
T ss_pred ECcCCcCChHHHHHHHH----------------HHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCc
Confidence 99999997766665432 23344 6777777788877432 23 3688999999998
Q ss_pred ccccCC----ccccCCC-CCCEEEccCCCCCCCCCCCccccccccCC-CCCCEEEccccccccc----CChhhhhccccc
Q 041467 141 FSGGVS----VDFSRLK-NLSWLNLGVNNLGSGTANELDFINLLTNC-SKLERLYFNRNGFEGV----LPHSIANLSSTI 210 (746)
Q Consensus 141 l~~~~~----~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l-~~L~~L~Ls~N~l~~~----~p~~~~~l~~~L 210 (746)
|+.... ..+..++ +|++|+|++|.++..... .+...+..+ ++|++|+|++|.+++. ++..+.....+|
T Consensus 150 l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~--~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L 227 (362)
T 3goz_A 150 LGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCA--ELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHV 227 (362)
T ss_dssp GGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHH--HHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTC
T ss_pred CCHHHHHHHHHHHhcCCccccEeeecCCCCchhhHH--HHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCc
Confidence 885433 3345555 899999999988763221 223345556 5899999999998853 555666654479
Q ss_pred ceEEcccCcccccCC----ccccCCCCCCeeeccccccee-------cCCcCCCCCCCCceeecccccccccccccc
Q 041467 211 KQIAMGSNRISSTIP----HGIRNLVNLNWLTMESSQLIG-------TIPPLIGETPNLQLLNIGGNHLQGSILSSL 276 (746)
Q Consensus 211 ~~L~l~~N~i~~~~p----~~~~~l~~L~~L~L~~N~l~~-------~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l 276 (746)
+.|++++|.|++..+ ..+..+++|+.|+|++|.+.+ .++..+..+++|+.||+++|.+.+..+..+
T Consensus 228 ~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~~~~~~ 304 (362)
T 3goz_A 228 VSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPSHSIPI 304 (362)
T ss_dssp CEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGGGCHHH
T ss_pred eEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCcchHHH
Confidence 999999999986443 346778999999999998432 244578889999999999999987644433
No 331
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.89 E-value=2.4e-22 Score=206.73 Aligned_cols=202 Identities=18% Similarity=0.258 Sum_probs=146.1
Q ss_pred CCCEEeccCCCcccccC--CCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEE
Q 041467 111 SLLLLSLAFNQFLSLSN--ASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERL 188 (746)
Q Consensus 111 ~L~~L~Ls~N~l~~l~~--l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L 188 (746)
+.+.+++++|++..++. .++|+.|+|++|++++..+..|..+++|++|+|++|.++..+ +..|.++++|++|
T Consensus 17 ~~~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~------~~~~~~l~~L~~L 90 (270)
T 2o6q_A 17 NKNSVDCSSKKLTAIPSNIPADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLP------AGIFKELKNLETL 90 (270)
T ss_dssp TTTEEECTTSCCSSCCSCCCTTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCC------TTTTSSCTTCCEE
T ss_pred CCCEEEccCCCCCccCCCCCCCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeC------hhhhcCCCCCCEE
Confidence 46677788887766543 346888888888888777777888888888888888887532 2345677888888
Q ss_pred EcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCCCceeecccccc
Q 041467 189 YFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHL 268 (746)
Q Consensus 189 ~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 268 (746)
+|++|++++..+..|..+. +|++|++++|++++..|..|.++++|++|+|++|++.+..+..|..+++|+.|+|++|++
T Consensus 91 ~l~~n~l~~~~~~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l 169 (270)
T 2o6q_A 91 WVTDNKLQALPIGVFDQLV-NLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQL 169 (270)
T ss_dssp ECCSSCCCCCCTTTTTTCS-SCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred ECCCCcCCcCCHhHccccc-CCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcC
Confidence 8888888765556666666 688888888888876667777888888888888888766666677788888888887776
Q ss_pred cccccccccccChHHhhhccCCCCCCccccCCCCCCeeeecCCcCccccchhhhhcccccceEEccCcccccc
Q 041467 269 QGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGS 341 (746)
Q Consensus 269 ~~~~~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~ 341 (746)
++ ..+..|..+++|+.|+|++|++++..+..+..+..+ +.|++++|++...
T Consensus 170 ~~---------------------~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L-~~L~l~~N~~~c~ 220 (270)
T 2o6q_A 170 KR---------------------VPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKL-KMLQLQENPWDCT 220 (270)
T ss_dssp SC---------------------CCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTC-CEEECCSSCBCCS
T ss_pred cE---------------------eChhHhccCCCcCEEECCCCcCCcCCHHHhccccCC-CEEEecCCCeeCC
Confidence 63 223446677778888888888875444446666777 5677777777643
No 332
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.89 E-value=1.1e-24 Score=250.65 Aligned_cols=339 Identities=14% Similarity=0.077 Sum_probs=224.0
Q ss_pred cccEEecccCc-Cc-ccCchhhhCCccCcEEecccCcCCcc----CCccccCCCCCCeeeCcCCCCC----CccchhhcC
Q 041467 19 FLRYINLVNNG-FN-GEIPHQIGRLISLERLILSNNSFSCA----IPANLSSGSNLIKLSTDSNNLV----RDILTEICS 88 (746)
Q Consensus 19 ~L~~L~Ls~N~-l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~----~~~~~~~~~ 88 (746)
+|++|+|++|. ++ ..++....++++|++|+|++|.+++. ++..+.++++|++|++++|.+. +.++..+.+
T Consensus 139 ~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~ 218 (592)
T 3ogk_B 139 DLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARN 218 (592)
T ss_dssp GCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHH
T ss_pred cCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhh
Confidence 38888888876 22 12334445788888888888887655 3445566788888888888876 344555667
Q ss_pred CCCCCEEEccCCCC---cCcccCCCCCCEEeccCCCc--------ccccCCCCCcEeeCccCcccccCCccccCCCCCCE
Q 041467 89 LFKLERLRIDCGGR---IDSLGHLKSLLLLSLAFNQF--------LSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSW 157 (746)
Q Consensus 89 l~~L~~L~l~~~~~---~~~~~~l~~L~~L~Ls~N~l--------~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 157 (746)
+++|+.|+++.+.. +..+.++++|+.|+++.+.. ..+..+++|+.|+++++.. +.+|..+..+++|++
T Consensus 219 ~~~L~~L~L~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~-~~l~~~~~~~~~L~~ 297 (592)
T 3ogk_B 219 CRSLVSVKVGDFEILELVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGP-NEMPILFPFAAQIRK 297 (592)
T ss_dssp CTTCCEEECSSCBGGGGHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCT-TTGGGGGGGGGGCCE
T ss_pred CCCCcEEeccCccHHHHHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccccCccccch-hHHHHHHhhcCCCcE
Confidence 88888888877432 24567778888888874322 3456777888888887643 355667777888888
Q ss_pred EEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccc-cCChhhhhcccccceEEcc-----------cCccccc-C
Q 041467 158 LNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEG-VLPHSIANLSSTIKQIAMG-----------SNRISST-I 224 (746)
Q Consensus 158 L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~~L~~L~l~-----------~N~i~~~-~ 224 (746)
|+|++|.++.. .+...+..+++|+.|+++ |.+.. .++..+..++ +|+.|+++ .|.+++. +
T Consensus 298 L~Ls~~~l~~~-----~~~~~~~~~~~L~~L~L~-~~~~~~~l~~~~~~~~-~L~~L~L~~g~~~~~~~~~~~~~~~~~~ 370 (592)
T 3ogk_B 298 LDLLYALLETE-----DHCTLIQKCPNLEVLETR-NVIGDRGLEVLAQYCK-QLKRLRIERGADEQGMEDEEGLVSQRGL 370 (592)
T ss_dssp EEETTCCCCHH-----HHHHHHTTCTTCCEEEEE-GGGHHHHHHHHHHHCT-TCCEEEEECCCCSSTTSSTTCCCCHHHH
T ss_pred EecCCCcCCHH-----HHHHHHHhCcCCCEEecc-CccCHHHHHHHHHhCC-CCCEEEeecCccccccccccCccCHHHH
Confidence 88888876541 223446778888888888 44432 3333334454 68888888 3566543 2
Q ss_pred CccccCCCCCCeeecccccceecCCcCCCC-CCCCceeecc----ccccccc-----c---cccccccChHHhhh--ccC
Q 041467 225 PHGIRNLVNLNWLTMESSQLIGTIPPLIGE-TPNLQLLNIG----GNHLQGS-----I---LSSLGNLTLQTYLF--NNL 289 (746)
Q Consensus 225 p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-l~~L~~L~Ls----~N~l~~~-----~---~~~l~~l~~l~~l~--n~l 289 (746)
+..+..+++|++|+++.|++++..+..++. +++|+.|+++ .|.+++. + ...+.+|+.|++.+ +.+
T Consensus 371 ~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l 450 (592)
T 3ogk_B 371 IALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGL 450 (592)
T ss_dssp HHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGC
T ss_pred HHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCc
Confidence 223455788888888888887666555554 7788888886 6677653 1 22344555555532 235
Q ss_pred CCCCCcccc-CCCCCCeeeecCCcCcc-ccchhhhhcccccceEEccCccccccCchhhhcccCCceeecCCCCCCCCCC
Q 041467 290 QGNIPSSLA-NCKSLLGLSVSHNKLTS-TLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNLKNLLRLHIPEYPENLSFF 367 (746)
Q Consensus 290 ~~~~p~~~~-~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~lp~~~~~l~~L 367 (746)
++..+..++ .+++|++|++++|++++ .++..+..+++| +.|++++|.+++.....+. ..+++|
T Consensus 451 ~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L-~~L~l~~n~l~~~~~~~~~--------------~~l~~L 515 (592)
T 3ogk_B 451 TDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNL-QKLEMRGCCFSERAIAAAV--------------TKLPSL 515 (592)
T ss_dssp CHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTC-CEEEEESCCCBHHHHHHHH--------------HHCSSC
T ss_pred cHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCccc-CeeeccCCCCcHHHHHHHH--------------HhcCcc
Confidence 544444444 37889999999999986 355556777888 6899999998754333321 134566
Q ss_pred CEEEccCCcCccc
Q 041467 368 ELLNLSYNYFGSE 380 (746)
Q Consensus 368 ~~L~ls~N~l~~~ 380 (746)
+.|++++|+++..
T Consensus 516 ~~L~ls~n~it~~ 528 (592)
T 3ogk_B 516 RYLWVQGYRASMT 528 (592)
T ss_dssp CEEEEESCBCCTT
T ss_pred CeeECcCCcCCHH
Confidence 8888888887764
No 333
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.89 E-value=5.7e-25 Score=238.83 Aligned_cols=272 Identities=19% Similarity=0.233 Sum_probs=170.0
Q ss_pred ccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCC----ccccCCCCCCeeeCcCCCC---CCccchhhcCCC
Q 041467 18 TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIP----ANLSSGSNLIKLSTDSNNL---VRDILTEICSLF 90 (746)
Q Consensus 18 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p----~~~~~l~~L~~L~L~~N~l---~~~~~~~~~~l~ 90 (746)
..|++.+++...+. .++..+..+++|++|+|++|.|++..+ ..|..+++|++|+|++|.+ .+.+|..+..+.
T Consensus 9 ~~L~~~~l~~~~~~-~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~ 87 (386)
T 2ca6_A 9 KSLKLDAITTEDEK-SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLL 87 (386)
T ss_dssp CCCEESSCCSHHHH-TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHH
T ss_pred cccccCCCCHHHHH-HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHH
Confidence 34555555555554 688889999999999999999987644 4477899999999988643 344454432110
Q ss_pred CCCEEEccCCCCcCcccCCCCCCEEeccCCCcccccCCCCCcEeeCccCcccc----cCCccccCCCCCCEEEccCCCCC
Q 041467 91 KLERLRIDCGGRIDSLGHLKSLLLLSLAFNQFLSLSNASSLEMIEFSRNQFSG----GVSVDFSRLKNLSWLNLGVNNLG 166 (746)
Q Consensus 91 ~L~~L~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~l~~L~~L~Ls~N~l~~----~~~~~~~~l~~L~~L~Ls~N~l~ 166 (746)
. .+..+++|++|+|++|++++ .++..+..+++|++|+|++|.++
T Consensus 88 -------------~-------------------~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~ 135 (386)
T 2ca6_A 88 -------------Q-------------------ALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLG 135 (386)
T ss_dssp -------------H-------------------HHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCH
T ss_pred -------------H-------------------HHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCC
Confidence 1 22334445555555555554 24445556666666666666654
Q ss_pred CCCCCCccccccccCC---------CCCCEEEccccccc-ccCC---hhhhhcccccceEEcccCccc--c---cCCccc
Q 041467 167 SGTANELDFINLLTNC---------SKLERLYFNRNGFE-GVLP---HSIANLSSTIKQIAMGSNRIS--S---TIPHGI 228 (746)
Q Consensus 167 ~~~~~~~~~~~~~~~l---------~~L~~L~Ls~N~l~-~~~p---~~~~~l~~~L~~L~l~~N~i~--~---~~p~~~ 228 (746)
..... .++..+..+ ++|++|+|++|+++ +.+| ..+..++ +|+.|++++|+|+ | ..|..+
T Consensus 136 ~~~~~--~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~-~L~~L~L~~n~l~~~g~~~l~~~~l 212 (386)
T 2ca6_A 136 PQAGA--KIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHR-LLHTVKMVQNGIRPEGIEHLLLEGL 212 (386)
T ss_dssp HHHHH--HHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCT-TCCEEECCSSCCCHHHHHHHHHTTG
T ss_pred HHHHH--HHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCC-CcCEEECcCCCCCHhHHHHHHHHHh
Confidence 21000 122223333 66777777777665 3333 3444554 5777777777766 2 344467
Q ss_pred cCCCCCCeeecccccce----ecCCcCCCCCCCCceeecccccccccccccccccChHHhhhccCCCCCCccc--cCCCC
Q 041467 229 RNLVNLNWLTMESSQLI----GTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSL--ANCKS 302 (746)
Q Consensus 229 ~~l~~L~~L~L~~N~l~----~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~l~~l~n~l~~~~p~~~--~~l~~ 302 (746)
..+++|+.|+|++|.++ +.+|..+..+++|++|+|++|.+++.... .+|..+ +.+++
T Consensus 213 ~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~-----------------~l~~~l~~~~~~~ 275 (386)
T 2ca6_A 213 AYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAA-----------------AVVDAFSKLENIG 275 (386)
T ss_dssp GGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHH-----------------HHHHHHHTCSSCC
T ss_pred hcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHH-----------------HHHHHHhhccCCC
Confidence 77778888888888875 56677777788888888888877643111 123344 34777
Q ss_pred CCeeeecCCcCcc----ccchhh-hhcccccceEEccCccccccCc
Q 041467 303 LLGLSVSHNKLTS----TLPQQI-LSVTTLSLYLELDNNLLNGSLP 343 (746)
Q Consensus 303 L~~L~Ls~N~l~~----~~p~~~-~~l~~l~~~L~Ls~N~l~~~~p 343 (746)
|+.|+|++|++++ .+|..+ .++++| ++|++++|++++..|
T Consensus 276 L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L-~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 276 LQTLRLQYNEIELDAVRTLKTVIDEKMPDL-LFLELNGNRFSEEDD 320 (386)
T ss_dssp CCEEECCSSCCBHHHHHHHHHHHHHHCTTC-CEEECTTSBSCTTSH
T ss_pred eEEEECcCCcCCHHHHHHHHHHHHhcCCCc-eEEEccCCcCCcchh
Confidence 8888888888876 477777 446777 578888888876554
No 334
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.89 E-value=5.9e-23 Score=215.80 Aligned_cols=158 Identities=15% Similarity=0.162 Sum_probs=113.4
Q ss_pred CCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCCh----h
Q 041467 127 NASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPH----S 202 (746)
Q Consensus 127 ~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~----~ 202 (746)
.+++|++|+|++|++++..+..|+.+++|++|+|++|++.+... +..+..+..+++|++|+|++|+++ .+|. .
T Consensus 143 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l 219 (310)
T 4glp_A 143 LKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERG--LMAALCPHKFPAIQNLALRNTGME-TPTGVCAAL 219 (310)
T ss_dssp BCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHH--HHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHH
T ss_pred hccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchh--hhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHH
Confidence 56788888888888888888888889999999999998754100 001123467888889999998886 3333 2
Q ss_pred hhhcccccceEEcccCcccccCCccccCC---CCCCeeecccccceecCCcCCCCCCCCceeeccccccccccccccccc
Q 041467 203 IANLSSTIKQIAMGSNRISSTIPHGIRNL---VNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNL 279 (746)
Q Consensus 203 ~~~l~~~L~~L~l~~N~i~~~~p~~~~~l---~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l 279 (746)
+..+. +|++|++++|+|++..|..+..+ ++|++|+|++|+++ .+|..+. ++|+.|+|++|++++
T Consensus 220 ~~~l~-~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~--------- 286 (310)
T 4glp_A 220 AAAGV-QPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNR--------- 286 (310)
T ss_dssp HHHTC-CCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCS---------
T ss_pred HhcCC-CCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCC---------
Confidence 34555 68888888888887777777666 58888888888887 5666654 678888888887763
Q ss_pred ChHHhhhccCCCCCCccccCCCCCCeeeecCCcCc
Q 041467 280 TLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLT 314 (746)
Q Consensus 280 ~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 314 (746)
+|. +..+++|+.|+|++|+|+
T Consensus 287 -------------~~~-~~~l~~L~~L~L~~N~l~ 307 (310)
T 4glp_A 287 -------------APQ-PDELPEVDNLTLDGNPFL 307 (310)
T ss_dssp -------------CCC-TTSCCCCSCEECSSTTTS
T ss_pred -------------Cch-hhhCCCccEEECcCCCCC
Confidence 122 345677788888888776
No 335
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.88 E-value=1.1e-22 Score=217.40 Aligned_cols=243 Identities=16% Similarity=0.111 Sum_probs=171.1
Q ss_pred cEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEccCC
Q 041467 21 RYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDCG 100 (746)
Q Consensus 21 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~ 100 (746)
+.++.++++++ .+|..+ .+++++|+|++|+|+.+.+..|.++++|++|+|++|++.+.+|..
T Consensus 12 ~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~--------------- 73 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEAD--------------- 73 (350)
T ss_dssp TEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTT---------------
T ss_pred CEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChh---------------
Confidence 57899999998 788776 368999999999999655567999999999999999987766542
Q ss_pred CCcCcccCCCCCCEEeccCCCcccccCCCCCc-EeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccc
Q 041467 101 GRIDSLGHLKSLLLLSLAFNQFLSLSNASSLE-MIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLL 179 (746)
Q Consensus 101 ~~~~~~~~l~~L~~L~Ls~N~l~~l~~l~~L~-~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~ 179 (746)
+|. ++++|. .+.++.|+|+++.|..|..+++|++|++++|.++..+. ..+
T Consensus 74 ----~f~-------------------~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~------~~~ 124 (350)
T 4ay9_X 74 ----VFS-------------------NLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPD------VHK 124 (350)
T ss_dssp ----SBC-------------------SCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCC------CTT
T ss_pred ----Hhh-------------------cchhhhhhhcccCCcccccCchhhhhccccccccccccccccCCc------hhh
Confidence 122 233322 34556677777777778888888888888888876332 223
Q ss_pred cCCCCCCEEEccc-ccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeeccc-ccceecCCcCCCCCCC
Q 041467 180 TNCSKLERLYFNR-NGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMES-SQLIGTIPPLIGETPN 257 (746)
Q Consensus 180 ~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~ 257 (746)
....++..|++++ |++....+..|..+...++.|++++|+|+. +|.......+|++|++++ |.+....+..|..+++
T Consensus 125 ~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~-i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~ 203 (350)
T 4ay9_X 125 IHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQE-IHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASG 203 (350)
T ss_dssp CCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCE-ECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEEC
T ss_pred cccchhhhhhhccccccccccccchhhcchhhhhhccccccccC-CChhhccccchhHHhhccCCcccCCCHHHhccCcc
Confidence 4455677777765 456644455566665567888888888885 444444556788888875 4444333456788888
Q ss_pred CceeecccccccccccccccccChHHhhhccCCCCCCccccCCCCCCeeeecCCc
Q 041467 258 LQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNK 312 (746)
Q Consensus 258 L~~L~Ls~N~l~~~~~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~ 312 (746)
|++|||++|+|+...+..+.+|+.|+.++++-...+| .+.++++|+.++++++.
T Consensus 204 L~~LdLs~N~l~~lp~~~~~~L~~L~~l~~~~l~~lP-~l~~l~~L~~l~l~~~~ 257 (350)
T 4ay9_X 204 PVILDISRTRIHSLPSYGLENLKKLRARSTYNLKKLP-TLEKLVALMEASLTYPS 257 (350)
T ss_dssp CSEEECTTSCCCCCCSSSCTTCCEEECTTCTTCCCCC-CTTTCCSCCEEECSCHH
T ss_pred cchhhcCCCCcCccChhhhccchHhhhccCCCcCcCC-CchhCcChhhCcCCCCc
Confidence 8888888888886666667777776666544444566 37778888888887543
No 336
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.88 E-value=4.8e-23 Score=216.47 Aligned_cols=228 Identities=16% Similarity=0.173 Sum_probs=165.5
Q ss_pred ccccEEecccCcCccc-Cch--hhhCCccCcEEecccCcCCccCCccc--cCCCCCCeeeCcCCCCCCccchhhcCCCCC
Q 041467 18 TFLRYINLVNNGFNGE-IPH--QIGRLISLERLILSNNSFSCAIPANL--SSGSNLIKLSTDSNNLVRDILTEICSLFKL 92 (746)
Q Consensus 18 ~~L~~L~Ls~N~l~~~-~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~~--~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 92 (746)
..++.|.++++.++.. +.. .+..+++|++|+|++|.+++..|..+ ..+++|++|+|++|.+.+..+..-.
T Consensus 64 ~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~----- 138 (310)
T 4glp_A 64 LRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAE----- 138 (310)
T ss_dssp CCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHH-----
T ss_pred cceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHH-----
Confidence 4578899998888632 111 22345779999999999999999988 8999999999999999765441100
Q ss_pred CEEEccCCCCcCcccCCCCCCEEeccCCCcc-----cccCCCCCcEeeCccCccccc---C-CccccCCCCCCEEEccCC
Q 041467 93 ERLRIDCGGRIDSLGHLKSLLLLSLAFNQFL-----SLSNASSLEMIEFSRNQFSGG---V-SVDFSRLKNLSWLNLGVN 163 (746)
Q Consensus 93 ~~L~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-----~l~~l~~L~~L~Ls~N~l~~~---~-~~~~~~l~~L~~L~Ls~N 163 (746)
..+..+++|++|+|++|++. .+.++++|++|+|++|++.+. . +..++.+++|++|+|++|
T Consensus 139 -----------~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N 207 (310)
T 4glp_A 139 -----------LQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNT 207 (310)
T ss_dssp -----------HHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSS
T ss_pred -----------HHhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCC
Confidence 01234556666666666663 345677888888888887642 1 233467888888888888
Q ss_pred CCCCCCCCCccccc-cccCCCCCCEEEcccccccccCChhhhhcc--cccceEEcccCcccccCCccccCCCCCCeeecc
Q 041467 164 NLGSGTANELDFIN-LLTNCSKLERLYFNRNGFEGVLPHSIANLS--STIKQIAMGSNRISSTIPHGIRNLVNLNWLTME 240 (746)
Q Consensus 164 ~l~~~~~~~~~~~~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~--~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~ 240 (746)
+++..+ ..+. .+..+++|++|+|++|++++..|..++.+. ++|++|++++|+|+ .+|..+. ++|++|+|+
T Consensus 208 ~l~~l~----~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls 280 (310)
T 4glp_A 208 GMETPT----GVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AKLRVLDLS 280 (310)
T ss_dssp CCCCHH----HHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SCCSCEECC
T ss_pred CCCchH----HHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CCCCEEECC
Confidence 886411 1111 356778889999999988877777776662 37999999999998 5777664 789999999
Q ss_pred cccceecCCcCCCCCCCCceeecccccccc
Q 041467 241 SSQLIGTIPPLIGETPNLQLLNIGGNHLQG 270 (746)
Q Consensus 241 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 270 (746)
+|++++. |. +..+++|+.|+|++|+++.
T Consensus 281 ~N~l~~~-~~-~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 281 SNRLNRA-PQ-PDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp SCCCCSC-CC-TTSCCCCSCEECSSTTTSC
T ss_pred CCcCCCC-ch-hhhCCCccEEECcCCCCCC
Confidence 9999864 43 6788999999999998873
No 337
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.88 E-value=1.6e-22 Score=204.07 Aligned_cols=194 Identities=14% Similarity=0.150 Sum_probs=101.1
Q ss_pred EecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCC-CCCccchhhcCCCCCCEEEccCCC
Q 041467 23 INLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNN-LVRDILTEICSLFKLERLRIDCGG 101 (746)
Q Consensus 23 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l~~L~~L~l~~~~ 101 (746)
+++..+.++ .+|. +. .+|++|+|++|++++..+..|.++++|++|++++|+ +.+..+..|.
T Consensus 16 ~~v~c~~l~-~ip~-~~--~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~-------------- 77 (239)
T 2xwt_C 16 FRVTCKDIQ-RIPS-LP--PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFY-------------- 77 (239)
T ss_dssp TEEEECSCS-SCCC-CC--TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEE--------------
T ss_pred ceeEccCcc-ccCC-CC--CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcC--------------
Confidence 344444465 5666 43 378888888888887666678888888888888886 5333222332
Q ss_pred CcCcccCCCCCCEEeccCCCcccccCCCCCcEeeCcc-CcccccCCccccCCCCCCEEEccCCCCCCCCCCCcccccccc
Q 041467 102 RIDSLGHLKSLLLLSLAFNQFLSLSNASSLEMIEFSR-NQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLT 180 (746)
Q Consensus 102 ~~~~~~~l~~L~~L~Ls~N~l~~l~~l~~L~~L~Ls~-N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~ 180 (746)
+ +++|++|++++ |++++..+..|.++++|++|++++|.+++ +|. +.
T Consensus 78 ------~-------------------l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-------lp~-~~ 124 (239)
T 2xwt_C 78 ------N-------------------LSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-------FPD-LT 124 (239)
T ss_dssp ------S-------------------CTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-------CCC-CT
T ss_pred ------C-------------------CcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-------ccc-cc
Confidence 2 33333444443 44444444444445555555555554443 122 33
Q ss_pred CCCCCC---EEEcccc-cccccCChhhhhcccccc-eEEcccCcccccCCccccCCCCCCeeeccccc-ceecCCcCCCC
Q 041467 181 NCSKLE---RLYFNRN-GFEGVLPHSIANLSSTIK-QIAMGSNRISSTIPHGIRNLVNLNWLTMESSQ-LIGTIPPLIGE 254 (746)
Q Consensus 181 ~l~~L~---~L~Ls~N-~l~~~~p~~~~~l~~~L~-~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~ 254 (746)
.+++|+ +|++++| ++++..+..|..+. +|+ .|++++|+++...+..|.. ++|+.|++++|+ +.+..+..|..
T Consensus 125 ~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~-~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~ 202 (239)
T 2xwt_C 125 KVYSTDIFFILEITDNPYMTSIPVNAFQGLC-NETLTLKLYNNGFTSVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGG 202 (239)
T ss_dssp TCCBCCSEEEEEEESCTTCCEECTTTTTTTB-SSEEEEECCSCCCCEECTTTTTT-CEEEEEECTTCTTCCEECTTTTTT
T ss_pred cccccccccEEECCCCcchhhcCcccccchh-cceeEEEcCCCCCcccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhc
Confidence 444444 5555555 45443333444444 455 5555555554222222222 455555555552 54444444555
Q ss_pred C-CCCceeeccccccc
Q 041467 255 T-PNLQLLNIGGNHLQ 269 (746)
Q Consensus 255 l-~~L~~L~Ls~N~l~ 269 (746)
+ ++|+.|++++|+++
T Consensus 203 l~~~L~~L~l~~N~l~ 218 (239)
T 2xwt_C 203 VYSGPSLLDVSQTSVT 218 (239)
T ss_dssp CSBCCSEEECTTCCCC
T ss_pred cccCCcEEECCCCccc
Confidence 5 55555555555554
No 338
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.88 E-value=3.5e-22 Score=201.52 Aligned_cols=197 Identities=12% Similarity=0.138 Sum_probs=147.5
Q ss_pred ccccEEecccCcCcccCchhhhCCccCcEEecccCc-CCccCCccccCCCCCCeeeCcC-CCCCCccchhhcCCCCCCEE
Q 041467 18 TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNS-FSCAIPANLSSGSNLIKLSTDS-NNLVRDILTEICSLFKLERL 95 (746)
Q Consensus 18 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L 95 (746)
+.|++|+|++|++++..+..|.++++|++|+|++|+ +++..+..|.++++|++|++++ |.+.+..+..|.
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~-------- 102 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALK-------- 102 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEE--------
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhC--------
Confidence 479999999999997777799999999999999997 8876667899999999999998 888544333333
Q ss_pred EccCCCCcCcccCCCCCCEEeccCCCcccccCCCCCcEeeCccCcccccCCccccCCCCCC---EEEccCC-CCCCCCCC
Q 041467 96 RIDCGGRIDSLGHLKSLLLLSLAFNQFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLS---WLNLGVN-NLGSGTAN 171 (746)
Q Consensus 96 ~l~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~---~L~Ls~N-~l~~~~~~ 171 (746)
++++|+.|++++|++++ +|. |..+++|+ +|++++| .++..
T Consensus 103 -------------------------------~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i--- 146 (239)
T 2xwt_C 103 -------------------------------ELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSI--- 146 (239)
T ss_dssp -------------------------------CCTTCCEEEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEE---
T ss_pred -------------------------------CCCCCCEEeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhc---
Confidence 34455555666666665 343 66677776 7777777 77652
Q ss_pred CccccccccCCCCCC-EEEcccccccccCChhhhhcccccceEEcccCc-ccccCCccccCC-CCCCeeecccccceecC
Q 041467 172 ELDFINLLTNCSKLE-RLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNR-ISSTIPHGIRNL-VNLNWLTMESSQLIGTI 248 (746)
Q Consensus 172 ~~~~~~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~-i~~~~p~~~~~l-~~L~~L~L~~N~l~~~~ 248 (746)
.+..|.++++|+ .|++++|+++ .+|...+... +|+.|++++|+ +++..+..|.++ ++|+.|++++|++++ +
T Consensus 147 ---~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~~-~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~-l 220 (239)
T 2xwt_C 147 ---PVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGT-KLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTA-L 220 (239)
T ss_dssp ---CTTTTTTTBSSEEEEECCSCCCC-EECTTTTTTC-EEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCC-C
T ss_pred ---CcccccchhcceeEEEcCCCCCc-ccCHhhcCCC-CCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCcccc-C
Confidence 223466777888 8888888887 4554444444 68888888884 887667778888 888999998888874 4
Q ss_pred CcCCCCCCCCceeecccc
Q 041467 249 PPLIGETPNLQLLNIGGN 266 (746)
Q Consensus 249 p~~~~~l~~L~~L~Ls~N 266 (746)
|.. .+++|+.|+++++
T Consensus 221 ~~~--~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 221 PSK--GLEHLKELIARNT 236 (239)
T ss_dssp CCT--TCTTCSEEECTTC
T ss_pred Chh--HhccCceeeccCc
Confidence 443 5778888888776
No 339
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.87 E-value=7.8e-23 Score=217.51 Aligned_cols=218 Identities=16% Similarity=0.182 Sum_probs=158.7
Q ss_pred cccEEecccCcCcccCchhhhCC--ccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCc-cchhhcCCCCCCEE
Q 041467 19 FLRYINLVNNGFNGEIPHQIGRL--ISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRD-ILTEICSLFKLERL 95 (746)
Q Consensus 19 ~L~~L~Ls~N~l~~~~p~~~~~l--~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~L 95 (746)
.++.||+++|.+. |..+..+ ++++.|++++|.+.+..|. +..+++|++|+|++|.+.+. ++..+..+++|
T Consensus 48 ~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L--- 120 (336)
T 2ast_B 48 LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKL--- 120 (336)
T ss_dssp TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCC---
T ss_pred hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCC---
Confidence 4788999998886 5677777 8899999999999876554 66789999999999987654 56555555544
Q ss_pred EccCCCCcCcccCCCCCCEEeccCCCcc-----cccCCCCCcEeeCccC-ccccc-CCccccCCCCCCEEEccCC-CCCC
Q 041467 96 RIDCGGRIDSLGHLKSLLLLSLAFNQFL-----SLSNASSLEMIEFSRN-QFSGG-VSVDFSRLKNLSWLNLGVN-NLGS 167 (746)
Q Consensus 96 ~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-----~l~~l~~L~~L~Ls~N-~l~~~-~~~~~~~l~~L~~L~Ls~N-~l~~ 167 (746)
+.|+|++|++. .+..+++|++|+|++| .+++. ++..+..+++|++|+|++| .++.
T Consensus 121 -----------------~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~ 183 (336)
T 2ast_B 121 -----------------QNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTE 183 (336)
T ss_dssp -----------------SEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCH
T ss_pred -----------------CEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcCh
Confidence 44455555542 3556777777778777 56652 5556777888888888888 7764
Q ss_pred CCCCCccccccccCCC-CCCEEEcccc--ccc-ccCChhhhhcccccceEEcccCc-ccccCCccccCCCCCCeeecccc
Q 041467 168 GTANELDFINLLTNCS-KLERLYFNRN--GFE-GVLPHSIANLSSTIKQIAMGSNR-ISSTIPHGIRNLVNLNWLTMESS 242 (746)
Q Consensus 168 ~~~~~~~~~~~~~~l~-~L~~L~Ls~N--~l~-~~~p~~~~~l~~~L~~L~l~~N~-i~~~~p~~~~~l~~L~~L~L~~N 242 (746)
. .++..+..++ +|++|++++| .++ +.+|..+..++ +|+.|++++|. +++..+..+..+++|++|++++|
T Consensus 184 ~-----~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~-~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~ 257 (336)
T 2ast_B 184 K-----HVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCP-NLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRC 257 (336)
T ss_dssp H-----HHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCT-TCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTC
T ss_pred H-----HHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCC-CCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCC
Confidence 1 1456677788 8888888888 454 45666677776 68888888888 67667778888888888888888
Q ss_pred c-ceecCCcCCCCCCCCceeecccc
Q 041467 243 Q-LIGTIPPLIGETPNLQLLNIGGN 266 (746)
Q Consensus 243 ~-l~~~~p~~~~~l~~L~~L~Ls~N 266 (746)
. +.......++++++|+.|++++|
T Consensus 258 ~~~~~~~~~~l~~~~~L~~L~l~~~ 282 (336)
T 2ast_B 258 YDIIPETLLELGEIPTLKTLQVFGI 282 (336)
T ss_dssp TTCCGGGGGGGGGCTTCCEEECTTS
T ss_pred CCCCHHHHHHHhcCCCCCEEeccCc
Confidence 5 22211125778888999998888
No 340
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.87 E-value=1.2e-21 Score=205.28 Aligned_cols=207 Identities=20% Similarity=0.284 Sum_probs=135.6
Q ss_pred cEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEccCC
Q 041467 21 RYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDCG 100 (746)
Q Consensus 21 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~ 100 (746)
..+.+..+.+....+ +..+++|++|++++|.++. +| .+..+++|++|+|++|.+.+..+ +..+++|++|
T Consensus 22 ~~~~l~~~~~~~~~~--~~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L----- 90 (308)
T 1h6u_A 22 IKIAAGKSNVTDTVT--QADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITEL----- 90 (308)
T ss_dssp HHHHTTCSSTTSEEC--HHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEE-----
T ss_pred HHHHhCCCCcCceec--HHHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEE-----
Confidence 344555555543322 3456667777777776663 44 46666777777777666643222 4333333333
Q ss_pred CCcCcccCCCCCCEEeccCCCc---ccccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccc
Q 041467 101 GRIDSLGHLKSLLLLSLAFNQF---LSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFIN 177 (746)
Q Consensus 101 ~~~~~~~~l~~L~~L~Ls~N~l---~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~ 177 (746)
+|++|++ ..+..+++|+.|+|++|++++.. .+..+++|++|+|++|.+++. +.
T Consensus 91 ---------------~L~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~~--~l~~l~~L~~L~l~~n~l~~~-------~~ 146 (308)
T 1h6u_A 91 ---------------ELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVT--PLAGLSNLQVLYLDLNQITNI-------SP 146 (308)
T ss_dssp ---------------ECCSCCCSCCGGGTTCTTCCEEECTTSCCCCCG--GGTTCTTCCEEECCSSCCCCC-------GG
T ss_pred ---------------EccCCcCCCchhhcCCCCCCEEECCCCCCCCch--hhcCCCCCCEEECCCCccCcC-------cc
Confidence 3333333 23445667777777777777543 277788888888888887652 22
Q ss_pred cccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCC
Q 041467 178 LLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPN 257 (746)
Q Consensus 178 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 257 (746)
+..+++|+.|++++|++++ ++. +..++ +|+.|++++|++++..+ +..+++|++|+|++|++.+..| +..+++
T Consensus 147 -l~~l~~L~~L~l~~n~l~~-~~~-l~~l~-~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~~--l~~l~~ 218 (308)
T 1h6u_A 147 -LAGLTNLQYLSIGNAQVSD-LTP-LANLS-KLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LANTSN 218 (308)
T ss_dssp -GGGCTTCCEEECCSSCCCC-CGG-GTTCT-TCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCGG--GTTCTT
T ss_pred -ccCCCCccEEEccCCcCCC-Chh-hcCCC-CCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCcccc--ccCCCC
Confidence 6677888888888888874 333 66666 68888888888875433 7788888888888888876543 788888
Q ss_pred Cceeecccccccc
Q 041467 258 LQLLNIGGNHLQG 270 (746)
Q Consensus 258 L~~L~Ls~N~l~~ 270 (746)
|+.|+|++|.+++
T Consensus 219 L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 219 LFIVTLTNQTITN 231 (308)
T ss_dssp CCEEEEEEEEEEC
T ss_pred CCEEEccCCeeec
Confidence 8899998888874
No 341
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.87 E-value=4.3e-23 Score=223.97 Aligned_cols=237 Identities=18% Similarity=0.242 Sum_probs=174.9
Q ss_pred cccccccEEecccCcCcccCc----hhhhCCccCcEEecccCc---CCccCCccc-------cCCCCCCeeeCcCCCCCC
Q 041467 15 ILRTFLRYINLVNNGFNGEIP----HQIGRLISLERLILSNNS---FSCAIPANL-------SSGSNLIKLSTDSNNLVR 80 (746)
Q Consensus 15 ~~~~~L~~L~Ls~N~l~~~~p----~~~~~l~~L~~L~Ls~N~---l~~~~p~~~-------~~l~~L~~L~L~~N~l~~ 80 (746)
..+++|++|+|++|.++...+ ..+..+++|++|+|++|. +++.+|..+ ..+++|++|+|++|.+..
T Consensus 29 ~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~ 108 (386)
T 2ca6_A 29 LEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGP 108 (386)
T ss_dssp HHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCT
T ss_pred hcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCH
Confidence 346889999999999987644 447789999999999964 455566655 688999999999999876
Q ss_pred ----ccchhhcCCCCCCEEEccCCCCcCcccCCCCCCEEeccCCCcc-----cc----cCC---------CCCcEeeCcc
Q 041467 81 ----DILTEICSLFKLERLRIDCGGRIDSLGHLKSLLLLSLAFNQFL-----SL----SNA---------SSLEMIEFSR 138 (746)
Q Consensus 81 ----~~~~~~~~l~~L~~L~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-----~l----~~l---------~~L~~L~Ls~ 138 (746)
.+|..+.. +++|+.|+|++|.+. .+ ..+ ++|+.|+|++
T Consensus 109 ~~~~~l~~~l~~--------------------~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~ 168 (386)
T 2ca6_A 109 TAQEPLIDFLSK--------------------HTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGR 168 (386)
T ss_dssp TTHHHHHHHHHH--------------------CTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCS
T ss_pred HHHHHHHHHHHh--------------------CCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCC
Confidence 35555544 445555555666652 12 222 7888888888
Q ss_pred Cccc-ccCC---ccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEccccccc----ccCChhhhhccccc
Q 041467 139 NQFS-GGVS---VDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFE----GVLPHSIANLSSTI 210 (746)
Q Consensus 139 N~l~-~~~~---~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~----~~~p~~~~~l~~~L 210 (746)
|+++ +..+ ..+..+++|++|+|++|.++...... ..+..+..+++|+.|+|++|.++ +.+|..+..++ +|
T Consensus 169 n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~-l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~-~L 246 (386)
T 2ca6_A 169 NRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEH-LLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWP-NL 246 (386)
T ss_dssp SCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHH-HHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCT-TC
T ss_pred CCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHH-HHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCC-Cc
Confidence 8886 3344 35667888888888888886200000 12226778888999999999885 56777787777 69
Q ss_pred ceEEcccCccccc----CCcccc--CCCCCCeeeccccccee----cCCcCC-CCCCCCceeeccccccccccc
Q 041467 211 KQIAMGSNRISST----IPHGIR--NLVNLNWLTMESSQLIG----TIPPLI-GETPNLQLLNIGGNHLQGSIL 273 (746)
Q Consensus 211 ~~L~l~~N~i~~~----~p~~~~--~l~~L~~L~L~~N~l~~----~~p~~~-~~l~~L~~L~Ls~N~l~~~~~ 273 (746)
+.|+|++|+|++. +|..+. .+++|+.|+|++|.+.+ .+|..+ .++++|++|+|++|.+++..+
T Consensus 247 ~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~~~ 320 (386)
T 2ca6_A 247 RELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDD 320 (386)
T ss_dssp CEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTTSH
T ss_pred CEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcchh
Confidence 9999999998865 566663 48999999999999987 477766 668999999999999986553
No 342
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.87 E-value=3e-21 Score=196.21 Aligned_cols=178 Identities=18% Similarity=0.249 Sum_probs=130.2
Q ss_pred CCCEEeccCCCcccccC--CCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEE
Q 041467 111 SLLLLSLAFNQFLSLSN--ASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERL 188 (746)
Q Consensus 111 ~L~~L~Ls~N~l~~l~~--l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L 188 (746)
+.+.++++++.+..++. .++|+.|+|++|++++..+..|.++++|++|+|++|.+++. .+..|..+++|++|
T Consensus 15 ~~~~l~~~~~~l~~~p~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~------~~~~~~~l~~L~~L 88 (251)
T 3m19_A 15 GKKEVDCQGKSLDSVPSGIPADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTL------SAGVFDDLTELGTL 88 (251)
T ss_dssp GGTEEECTTCCCSSCCSCCCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCC------CTTTTTTCTTCCEE
T ss_pred CCeEEecCCCCccccCCCCCCCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCcc------CHhHhccCCcCCEE
Confidence 45667777777766542 35788888888888877777788888888888888888762 33456777888888
Q ss_pred EcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCCCceeecccccc
Q 041467 189 YFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHL 268 (746)
Q Consensus 189 ~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 268 (746)
+|++|++++..+..|..+. +|++|++++|+|++..+..|..+++|++|+|++|++.+..+..|+.+++|++|+|++|++
T Consensus 89 ~L~~n~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l 167 (251)
T 3m19_A 89 GLANNQLASLPLGVFDHLT-QLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQL 167 (251)
T ss_dssp ECTTSCCCCCCTTTTTTCT-TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred ECCCCcccccChhHhcccC-CCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcC
Confidence 8888888766666666776 688888888888766666677788888888888887766666777778888888887777
Q ss_pred cccccccccccChHHhhhccCCCCCCccccCCCCCCeeeecCCcCccc
Q 041467 269 QGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTST 316 (746)
Q Consensus 269 ~~~~~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 316 (746)
++ ..+..|..+++|+.|+|++|.+++.
T Consensus 168 ~~---------------------~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 168 QS---------------------VPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp SC---------------------CCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred Cc---------------------cCHHHHhCCCCCCEEEeeCCceeCC
Confidence 63 2334566777788888888887754
No 343
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.86 E-value=3.4e-21 Score=195.77 Aligned_cols=181 Identities=20% Similarity=0.253 Sum_probs=108.9
Q ss_pred ccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEc
Q 041467 18 TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRI 97 (746)
Q Consensus 18 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 97 (746)
...++++++++.++ .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|.+.+..+..+
T Consensus 14 ~~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~----------- 79 (251)
T 3m19_A 14 EGKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVF----------- 79 (251)
T ss_dssp GGGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTT-----------
T ss_pred CCCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHh-----------
Confidence 45667777777776 5665554 467777777777776666667777777777776666644333222
Q ss_pred cCCCCcCcccCCCCCCEEeccCCCcccccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccc
Q 041467 98 DCGGRIDSLGHLKSLLLLSLAFNQFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFIN 177 (746)
Q Consensus 98 ~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~ 177 (746)
.++++|++|+|++|+|++..+..|..+++|++|+|++|.|
T Consensus 80 ----------------------------~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l------------ 119 (251)
T 3m19_A 80 ----------------------------DDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQL------------ 119 (251)
T ss_dssp ----------------------------TTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCC------------
T ss_pred ----------------------------ccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcC------------
Confidence 2233344444444445444444444555555555555544
Q ss_pred cccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCC
Q 041467 178 LLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPN 257 (746)
Q Consensus 178 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 257 (746)
++..+..|..+. +|+.|++++|+|++..+..|+.+++|++|+|++|++.+..+..|..+++
T Consensus 120 ------------------~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 180 (251)
T 3m19_A 120 ------------------KSLPSGVFDRLT-KLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGK 180 (251)
T ss_dssp ------------------CCCCTTTTTTCT-TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTT
T ss_pred ------------------CCcChhHhccCC-cccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCC
Confidence 433333344444 4666666666666545556667777777777777777666667777777
Q ss_pred Cceeeccccccccc
Q 041467 258 LQLLNIGGNHLQGS 271 (746)
Q Consensus 258 L~~L~Ls~N~l~~~ 271 (746)
|+.|+|++|.+.+.
T Consensus 181 L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 181 LQTITLFGNQFDCS 194 (251)
T ss_dssp CCEEECCSCCBCTT
T ss_pred CCEEEeeCCceeCC
Confidence 77777777777643
No 344
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.86 E-value=2e-22 Score=214.33 Aligned_cols=252 Identities=19% Similarity=0.217 Sum_probs=180.9
Q ss_pred cCcEEecccCcCCccCCccccCC--CCCCeeeCcCCCCCCccchhhcCCCCCCEEEccCCCCcCcccCCCCCCEEeccCC
Q 041467 43 SLERLILSNNSFSCAIPANLSSG--SNLIKLSTDSNNLVRDILTEICSLFKLERLRIDCGGRIDSLGHLKSLLLLSLAFN 120 (746)
Q Consensus 43 ~L~~L~Ls~N~l~~~~p~~~~~l--~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~l~~L~~L~Ls~N 120 (746)
.++.||+++|.+. |..+..+ ++++.|++++|.+.+..+. +..+++|+.|+|++|
T Consensus 48 ~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~---------------------~~~~~~L~~L~L~~~ 103 (336)
T 2ast_B 48 LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE---------------------HFSPFRVQHMDLSNS 103 (336)
T ss_dssp TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS---------------------CCCCBCCCEEECTTC
T ss_pred hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh---------------------hccCCCCCEEEccCC
Confidence 4778888888776 4566666 7888888888877554332 335667777777777
Q ss_pred Ccc------cccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCC-CCCCCCCCCccccccccCCCCCCEEEcccc
Q 041467 121 QFL------SLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVN-NLGSGTANELDFINLLTNCSKLERLYFNRN 193 (746)
Q Consensus 121 ~l~------~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N-~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N 193 (746)
.+. .+..+++|++|+|++|++++..+..++.+++|++|+|++| .+++ ..++..+.++++|++|++++|
T Consensus 104 ~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~-----~~l~~~~~~~~~L~~L~l~~~ 178 (336)
T 2ast_B 104 VIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSE-----FALQTLLSSCSRLDELNLSWC 178 (336)
T ss_dssp EECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCH-----HHHHHHHHHCTTCCEEECCCC
T ss_pred CcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCH-----HHHHHHHhcCCCCCEEcCCCC
Confidence 763 2467889999999999888878888888899999999988 5653 024556778888999999998
Q ss_pred -ccccc-CChhhhhcccccceEEcccC--ccc-ccCCccccCCCCCCeeeccccc-ceecCCcCCCCCCCCceeeccccc
Q 041467 194 -GFEGV-LPHSIANLSSTIKQIAMGSN--RIS-STIPHGIRNLVNLNWLTMESSQ-LIGTIPPLIGETPNLQLLNIGGNH 267 (746)
Q Consensus 194 -~l~~~-~p~~~~~l~~~L~~L~l~~N--~i~-~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~Ls~N~ 267 (746)
.+++. ++..+..++.+|+.|++++| .++ +.+|..+.++++|++|++++|. +++..+..+..+++|++|++++|.
T Consensus 179 ~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~ 258 (336)
T 2ast_B 179 FDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCY 258 (336)
T ss_dssp TTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCT
T ss_pred CCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCC
Confidence 88754 56667776535889999888 454 4567777888888999998888 666677788888888888888885
Q ss_pred ccccccccccccChHHhhhccCCCCCCccccCCCCCCeeeecCCcCccccchhhhhccc-ccceEEccCccccccCchhh
Q 041467 268 LQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTT-LSLYLELDNNLLNGSLPPEV 346 (746)
Q Consensus 268 l~~~~~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~-l~~~L~Ls~N~l~~~~p~~~ 346 (746)
+..+..+ ..++.+++|+.|++++| ++. ..+..+.. + ..|++++|++++..|..+
T Consensus 259 --~~~~~~~------------------~~l~~~~~L~~L~l~~~-i~~---~~~~~l~~~l-~~L~l~~n~l~~~~~~~~ 313 (336)
T 2ast_B 259 --DIIPETL------------------LELGEIPTLKTLQVFGI-VPD---GTLQLLKEAL-PHLQINCSHFTTIARPTI 313 (336)
T ss_dssp --TCCGGGG------------------GGGGGCTTCCEEECTTS-SCT---TCHHHHHHHS-TTSEESCCCSCCTTCSSC
T ss_pred --CCCHHHH------------------HHHhcCCCCCEEeccCc-cCH---HHHHHHHhhC-cceEEecccCccccCCcc
Confidence 1111111 24567888899999888 432 12333322 4 457788888888888776
Q ss_pred hc
Q 041467 347 GN 348 (746)
Q Consensus 347 ~~ 348 (746)
++
T Consensus 314 ~~ 315 (336)
T 2ast_B 314 GN 315 (336)
T ss_dssp SS
T ss_pred cc
Confidence 54
No 345
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.86 E-value=2.7e-22 Score=207.01 Aligned_cols=144 Identities=18% Similarity=0.176 Sum_probs=115.4
Q ss_pred HHhhhhcCCCCCCeEeecCCeeEEE--------EEeehhhhhhh------------------hhhHHHHHHHHHhhcCCC
Q 041467 474 ELSKATNNFSPANKIREGGFNIVYN--------VAMKVANLKQK------------------EASRSFAAEFNALRNIRH 527 (746)
Q Consensus 474 ~~~~~~~~~~~~~~ig~g~~g~v~~--------vavK~~~~~~~------------------~~~~~~~~E~~~l~~l~H 527 (746)
.+......|+..+.||+|+||.||+ ||||++..... .....+.+|++++++++|
T Consensus 84 ~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~~ 163 (282)
T 1zar_A 84 RLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQG 163 (282)
T ss_dssp HHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhccC
Confidence 3344445677789999999999996 89999854321 134568999999999995
Q ss_pred CceeeEEEEEecCCcccchhhhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCCcEEE
Q 041467 528 RNLIKIITICSSIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDVVTHV 607 (746)
Q Consensus 528 pnIv~l~~~~~~~~~~~lv~e~~~~g~l~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~~~ki 607 (746)
+ ++.+++. .+..++||||+++|+|.. +...+...++.|++.|++|||+. +|+||||||+|||++ ++.+||
T Consensus 164 ~---~v~~~~~-~~~~~lvmE~~~g~~L~~--l~~~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NILl~-~~~vkl 233 (282)
T 1zar_A 164 L---AVPKVYA-WEGNAVLMELIDAKELYR--VRVENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLVS-EEGIWI 233 (282)
T ss_dssp S---SSCCEEE-EETTEEEEECCCCEEGGG--CCCSCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEE-TTEEEE
T ss_pred C---CcCeEEe-ccceEEEEEecCCCcHHH--cchhhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHEEEE-CCcEEE
Confidence 4 4444433 356799999999999976 44456678999999999999999 999999999999999 999999
Q ss_pred ccccccccccCCCCCCCcccccccccccccccccccccccc
Q 041467 608 GDLGLAKFLYGYEPGTTAETASSSIGINGTVGYVAPVIIAA 648 (746)
Q Consensus 608 ~DfGla~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~ 648 (746)
+|||+|+. +..|+|||++..
T Consensus 234 ~DFG~a~~---------------------~~~~~a~e~l~r 253 (282)
T 1zar_A 234 IDFPQSVE---------------------VGEEGWREILER 253 (282)
T ss_dssp CCCTTCEE---------------------TTSTTHHHHHHH
T ss_pred EECCCCeE---------------------CCCCCHHHHHHH
Confidence 99999974 346899999864
No 346
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.85 E-value=6.4e-24 Score=244.21 Aligned_cols=379 Identities=14% Similarity=0.096 Sum_probs=197.8
Q ss_pred cccccccEEecccCcCcc---cCc------------hhhhCCccCcEEecccCcCCccCCcccc-CCCCCCeeeCcCCCC
Q 041467 15 ILRTFLRYINLVNNGFNG---EIP------------HQIGRLISLERLILSNNSFSCAIPANLS-SGSNLIKLSTDSNNL 78 (746)
Q Consensus 15 ~~~~~L~~L~Ls~N~l~~---~~p------------~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~L~~N~l 78 (746)
..+++|+.|+|+++.... ..| ..+..+++|++|+|++|.+++..+..+. .+++|++|+|++|..
T Consensus 63 ~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~ 142 (594)
T 2p1m_B 63 RRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEG 142 (594)
T ss_dssp HHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEE
T ss_pred hhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCC
Confidence 346778888888875321 222 2234677888888888888776666665 578888888888733
Q ss_pred CCc--cchhhcCCCCCCEEEccCCCCc--------CcccCCCCCCEEeccCCC--c--cc----ccCCCCCcEeeCccC-
Q 041467 79 VRD--ILTEICSLFKLERLRIDCGGRI--------DSLGHLKSLLLLSLAFNQ--F--LS----LSNASSLEMIEFSRN- 139 (746)
Q Consensus 79 ~~~--~~~~~~~l~~L~~L~l~~~~~~--------~~~~~l~~L~~L~Ls~N~--l--~~----l~~l~~L~~L~Ls~N- 139 (746)
.+. ++..+.++++|++|+++.+... .....+++|+.|++++|. + .. +.++++|+.|++++|
T Consensus 143 ~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~ 222 (594)
T 2p1m_B 143 FSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAV 222 (594)
T ss_dssp EEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTS
T ss_pred CCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCC
Confidence 222 4444557888888888765411 222366788888888886 3 11 234688888888887
Q ss_pred cccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEE-EcccccccccCChhhhhcccccceEEcccC
Q 041467 140 QFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERL-YFNRNGFEGVLPHSIANLSSTIKQIAMGSN 218 (746)
Q Consensus 140 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L-~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N 218 (746)
.+++ ++..+..+++|+.|+++.+...-.......++..+.++++|+.| .+.+... +.+|..+..++ +|+.|++++|
T Consensus 223 ~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~~~~~L~~Ls~~~~~~~-~~l~~~~~~~~-~L~~L~L~~~ 299 (594)
T 2p1m_B 223 PLEK-LATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSGCKELRCLSGFWDAVP-AYLPAVYSVCS-RLTTLNLSYA 299 (594)
T ss_dssp CHHH-HHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHHTCTTCCEEECCBTCCG-GGGGGGHHHHT-TCCEEECTTC
T ss_pred cHHH-HHHHHhcCCcceEcccccccCccchhhHHHHHHHHhcCCCcccccCCcccch-hhHHHHHHhhC-CCCEEEccCC
Confidence 4443 66677778888888866543200000000122344555556655 3333222 23343333443 4666666665
Q ss_pred cccccCC-ccccCCCCCCeeecccccce-ecCCcCCCCCCCCceeecc---------ccccccccc----ccccccChHH
Q 041467 219 RISSTIP-HGIRNLVNLNWLTMESSQLI-GTIPPLIGETPNLQLLNIG---------GNHLQGSIL----SSLGNLTLQT 283 (746)
Q Consensus 219 ~i~~~~p-~~~~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~Ls---------~N~l~~~~~----~~l~~l~~l~ 283 (746)
.+++... ..+.++++|+.|++++| +. ..++.....+++|+.|+++ .|.+++... ..+.+|+.+.
T Consensus 300 ~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~ 378 (594)
T 2p1m_B 300 TVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVL 378 (594)
T ss_dssp CCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEE
T ss_pred CCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHH
Confidence 5443211 12345555666666555 22 1112222235555555552 233332111 1233444443
Q ss_pred hhhccCCCCCCcccc-CCCCCCeeeec--C----CcCcc-----ccchhhhhcccccceEEccCccccccCchhhhc-cc
Q 041467 284 YLFNNLQGNIPSSLA-NCKSLLGLSVS--H----NKLTS-----TLPQQILSVTTLSLYLELDNNLLNGSLPPEVGN-LK 350 (746)
Q Consensus 284 ~l~n~l~~~~p~~~~-~l~~L~~L~Ls--~----N~l~~-----~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~-l~ 350 (746)
...|++++..+..+. .+++|+.|+++ + |.+++ .++..+..+++| +.|++++ .+++..+..++. ++
T Consensus 379 ~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L-~~L~L~~-~l~~~~~~~l~~~~~ 456 (594)
T 2p1m_B 379 YFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDL-RRLSLSG-LLTDKVFEYIGTYAK 456 (594)
T ss_dssp EEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTC-CEEECCS-SCCHHHHHHHHHHCT
T ss_pred HhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCc-cEEeecC-cccHHHHHHHHHhch
Confidence 223444433333333 35555555555 3 34431 111223344455 3555544 444443444433 55
Q ss_pred CCceeecCCCC----------CCCCCCCEEEccCCcCcccCCC--CCccCCCCeeeEecCC
Q 041467 351 NLLRLHIPEYP----------ENLSFFELLNLSYNYFGSEVPT--KGVFNNKTRFSIIGNG 399 (746)
Q Consensus 351 ~L~~L~lp~~~----------~~l~~L~~L~ls~N~l~~~~p~--~~~~~~~~~~~~~~n~ 399 (746)
+|+.|++.... ..+++|+.|++++|.+++..+. ...+.++..+++.+|+
T Consensus 457 ~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~ 517 (594)
T 2p1m_B 457 KMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCS 517 (594)
T ss_dssp TCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSC
T ss_pred hccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCC
Confidence 55555442211 2356778888888887543321 1234566677776664
No 347
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.85 E-value=4.4e-21 Score=201.13 Aligned_cols=194 Identities=19% Similarity=0.322 Sum_probs=138.2
Q ss_pred cCCCCCCEEeccCCCccc---ccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCC
Q 041467 107 GHLKSLLLLSLAFNQFLS---LSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCS 183 (746)
Q Consensus 107 ~~l~~L~~L~Ls~N~l~~---l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~ 183 (746)
.++++|+.|++++|.+.. +..+++|+.|+|++|++++..+ +..+++|++|+|++|.+++. ..+..++
T Consensus 38 ~~l~~L~~L~l~~~~i~~l~~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~--------~~~~~l~ 107 (308)
T 1h6u_A 38 ADLDGITTLSAFGTGVTTIEGVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV--------SAIAGLQ 107 (308)
T ss_dssp HHHHTCCEEECTTSCCCCCTTGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC--------GGGTTCT
T ss_pred HHcCCcCEEEeeCCCccCchhhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc--------hhhcCCC
Confidence 345566666777666643 4557788888888888876544 77888888888888887652 2467788
Q ss_pred CCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCCCceeec
Q 041467 184 KLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNI 263 (746)
Q Consensus 184 ~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 263 (746)
+|+.|++++|++++ +|. +..++ +|+.|++++|++++..+ ++.+++|++|++++|++.+..+ +..+++|+.|++
T Consensus 108 ~L~~L~l~~n~l~~-~~~-l~~l~-~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l 180 (308)
T 1h6u_A 108 SIKTLDLTSTQITD-VTP-LAGLS-NLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKA 180 (308)
T ss_dssp TCCEEECTTSCCCC-CGG-GTTCT-TCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEEC
T ss_pred CCCEEECCCCCCCC-chh-hcCCC-CCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEEC
Confidence 88888888888875 343 66766 68888888888875433 7788888888888888875433 778888888888
Q ss_pred ccccccccccccccccChHHhhhccCCCCCCccccCCCCCCeeeecCCcCccccchhhhhcccccceEEccCccccccCc
Q 041467 264 GGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLP 343 (746)
Q Consensus 264 s~N~l~~~~~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p 343 (746)
++|++++. +. +..+++|+.|+|++|++++ ++ .+..+++| +.|++++|++++ .|
T Consensus 181 ~~n~l~~~----------------------~~-l~~l~~L~~L~L~~N~l~~-~~-~l~~l~~L-~~L~l~~N~i~~-~~ 233 (308)
T 1h6u_A 181 DDNKISDI----------------------SP-LASLPNLIEVHLKNNQISD-VS-PLANTSNL-FIVTLTNQTITN-QP 233 (308)
T ss_dssp CSSCCCCC----------------------GG-GGGCTTCCEEECTTSCCCB-CG-GGTTCTTC-CEEEEEEEEEEC-CC
T ss_pred CCCccCcC----------------------hh-hcCCCCCCEEEccCCccCc-cc-cccCCCCC-CEEEccCCeeec-CC
Confidence 88877632 11 5667788888888888875 33 26777777 578888888863 44
Q ss_pred h
Q 041467 344 P 344 (746)
Q Consensus 344 ~ 344 (746)
.
T Consensus 234 ~ 234 (308)
T 1h6u_A 234 V 234 (308)
T ss_dssp E
T ss_pred e
Confidence 3
No 348
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.85 E-value=2.4e-23 Score=239.47 Aligned_cols=349 Identities=18% Similarity=0.132 Sum_probs=148.8
Q ss_pred cccccEEecccCcCcccCchhhh-CCccCcEEecccC-cCCcc-CCccccCCCCCCeeeCcCCCCCCccchhh----cCC
Q 041467 17 RTFLRYINLVNNGFNGEIPHQIG-RLISLERLILSNN-SFSCA-IPANLSSGSNLIKLSTDSNNLVRDILTEI----CSL 89 (746)
Q Consensus 17 ~~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls~N-~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~~~~~----~~l 89 (746)
+++|++|+|++|.+++..+..+. .+++|++|+|++| .++.. ++..+.++++|++|+|++|.+.+..+..+ ..+
T Consensus 104 ~~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~ 183 (594)
T 2p1m_B 104 YTWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTY 183 (594)
T ss_dssp CTTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTC
T ss_pred CCCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcC
Confidence 34555555555555544444443 4555555555555 33321 23333345555555555555433322222 234
Q ss_pred CCCCEEEccCCC-Cc--C----cccCCCCCCEEeccCC-Ccc----cccCCCCCcEeeCc-------cCcccccCCcccc
Q 041467 90 FKLERLRIDCGG-RI--D----SLGHLKSLLLLSLAFN-QFL----SLSNASSLEMIEFS-------RNQFSGGVSVDFS 150 (746)
Q Consensus 90 ~~L~~L~l~~~~-~~--~----~~~~l~~L~~L~Ls~N-~l~----~l~~l~~L~~L~Ls-------~N~l~~~~~~~~~ 150 (746)
++|+.|+++.+. .+ . .+.++++|+.|+|++| .+. .+..+++|+.|+++ .|.+.+. +..+.
T Consensus 184 ~~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l-~~~l~ 262 (594)
T 2p1m_B 184 TSLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSGL-SVALS 262 (594)
T ss_dssp CCCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHHHHHHHHHCTTCSEEECSBCCCCCCHHHHHHH-HHHHH
T ss_pred CcCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHHHHHHHhcCCcceEcccccccCccchhhHHHH-HHHHh
Confidence 455555555443 11 0 1123455555555555 221 12344555555532 2223322 22445
Q ss_pred CCCCCCEE-EccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChh-hhhcccccceEEcccCcccc-cCCcc
Q 041467 151 RLKNLSWL-NLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHS-IANLSSTIKQIAMGSNRISS-TIPHG 227 (746)
Q Consensus 151 ~l~~L~~L-~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~~L~~L~l~~N~i~~-~~p~~ 227 (746)
++++|+.| .+...... .++..+..+++|+.|+|++|.+++..... +..++ +|+.|++++| ++. .++..
T Consensus 263 ~~~~L~~Ls~~~~~~~~-------~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~-~L~~L~l~~~-~~~~~l~~l 333 (594)
T 2p1m_B 263 GCKELRCLSGFWDAVPA-------YLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCP-KLQRLWVLDY-IEDAGLEVL 333 (594)
T ss_dssp TCTTCCEEECCBTCCGG-------GGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCT-TCCEEEEEGG-GHHHHHHHH
T ss_pred cCCCcccccCCcccchh-------hHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCC-CcCEEeCcCc-cCHHHHHHH
Confidence 55555555 22211110 22333334455555555555544322111 22333 4555555555 221 11112
Q ss_pred ccCCCCCCeeeccc---------ccceecCCcCC-CCCCCCceeecccccccccccc----cccccChHHhh--h----c
Q 041467 228 IRNLVNLNWLTMES---------SQLIGTIPPLI-GETPNLQLLNIGGNHLQGSILS----SLGNLTLQTYL--F----N 287 (746)
Q Consensus 228 ~~~l~~L~~L~L~~---------N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~~~----~l~~l~~l~~l--~----n 287 (746)
...+++|++|+++. +.+++.....+ ..+++|+.|+++.|.+++..+. .+.+|+.+++. + +
T Consensus 334 ~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~ 413 (594)
T 2p1m_B 334 ASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPD 413 (594)
T ss_dssp HHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCC
T ss_pred HHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcc
Confidence 22355555555522 22221111111 1245555555555555543222 12334444333 1 2
Q ss_pred cCCCC-----CCccccCCCCCCeeeecCCcCccccchhhhh-cccccceEEccCccccccCchhh-hcccCCceeecCCC
Q 041467 288 NLQGN-----IPSSLANCKSLLGLSVSHNKLTSTLPQQILS-VTTLSLYLELDNNLLNGSLPPEV-GNLKNLLRLHIPEY 360 (746)
Q Consensus 288 ~l~~~-----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-l~~l~~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~lp~~ 360 (746)
++++. ++..+..+++|+.|+|++ .+++..+..+.. +++| +.|+|++|.+++..+..+ ..+++|+.|++...
T Consensus 414 ~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L-~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n 491 (594)
T 2p1m_B 414 YLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKM-EMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDC 491 (594)
T ss_dssp TTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTC-CEEEEESCCSSHHHHHHHHHHCTTCCEEEEESC
T ss_pred cccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhc-cEeeccCCCCcHHHHHHHHhcCCCcCEEECcCC
Confidence 23211 111234455555555554 444443444443 4444 455555555544333333 44555555544221
Q ss_pred ----------CCCCCCCCEEEccCCcC
Q 041467 361 ----------PENLSFFELLNLSYNYF 377 (746)
Q Consensus 361 ----------~~~l~~L~~L~ls~N~l 377 (746)
...+++|+.|++++|++
T Consensus 492 ~~~~~~~~~~~~~l~~L~~L~l~~~~~ 518 (594)
T 2p1m_B 492 PFGDKALLANASKLETMRSLWMSSCSV 518 (594)
T ss_dssp SCCHHHHHHTGGGGGGSSEEEEESSCC
T ss_pred CCcHHHHHHHHHhCCCCCEEeeeCCCC
Confidence 12344555555555555
No 349
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.84 E-value=9.2e-21 Score=213.31 Aligned_cols=94 Identities=20% Similarity=0.311 Sum_probs=43.7
Q ss_pred CCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhccc
Q 041467 129 SSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSS 208 (746)
Q Consensus 129 ~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 208 (746)
++|+.|+|++|+|++ +|. |.. +|++|+|++|.|++ +|. .+++|+.|+|++|.|++ +|. .++
T Consensus 100 ~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-------lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~- 160 (571)
T 3cvr_A 100 ASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-------LPE---LPALLEYINADNNQLTM-LPE---LPT- 160 (571)
T ss_dssp TTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-------CCC---CCTTCCEEECCSSCCSC-CCC---CCT-
T ss_pred CCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-------CCC---cCccccEEeCCCCccCc-CCC---cCC-
Confidence 444555555555554 333 333 55555555555543 111 24455555555555543 333 122
Q ss_pred ccceEEcccCcccccCCccccCCCCCCeeecccccce
Q 041467 209 TIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLI 245 (746)
Q Consensus 209 ~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~ 245 (746)
+|+.|++++|+|++ +|. |. ++|+.|+|++|+++
T Consensus 161 ~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~ 193 (571)
T 3cvr_A 161 SLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE 193 (571)
T ss_dssp TCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS
T ss_pred CcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC
Confidence 45555555555543 343 33 44555555555444
No 350
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.84 E-value=5.3e-20 Score=181.27 Aligned_cols=179 Identities=17% Similarity=0.182 Sum_probs=144.4
Q ss_pred CEEeccCCCccccc--CCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEc
Q 041467 113 LLLSLAFNQFLSLS--NASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYF 190 (746)
Q Consensus 113 ~~L~Ls~N~l~~l~--~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~L 190 (746)
+.++++.+.+..++ -.++|++|++++|++++..+..|..+++|++|+|++|+++..+ +..|..+++|++|+|
T Consensus 10 ~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~------~~~~~~l~~L~~L~L 83 (208)
T 2o6s_A 10 TTVECYSQGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLP------NGVFNKLTSLTYLNL 83 (208)
T ss_dssp TEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCC------TTTTTTCTTCCEEEC
T ss_pred CEEEecCCCccCCCCCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccC------hhhcCCCCCcCEEEC
Confidence 45667777775554 2568999999999999888888999999999999999998632 345788999999999
Q ss_pred ccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCCCceeecccccccc
Q 041467 191 NRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQG 270 (746)
Q Consensus 191 s~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 270 (746)
++|++++..+..+..+. +|++|++++|+|++..+..|.++++|++|+|++|++.+..+..|..+++|+.|++++|.+.+
T Consensus 84 s~n~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 162 (208)
T 2o6s_A 84 STNQLQSLPNGVFDKLT-QLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC 162 (208)
T ss_dssp CSSCCCCCCTTTTTTCT-TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC
T ss_pred CCCcCCccCHhHhcCcc-CCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec
Confidence 99999976666678887 79999999999998777778999999999999999998777778999999999999998875
Q ss_pred cccccccccChHHhhhccCCCCCCccccCCCC
Q 041467 271 SILSSLGNLTLQTYLFNNLQGNIPSSLANCKS 302 (746)
Q Consensus 271 ~~~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~ 302 (746)
.. ..++.+....|+++|.+|.+++.++.
T Consensus 163 ~~----~~l~~L~~~~n~~~g~ip~~~~~l~~ 190 (208)
T 2o6s_A 163 TC----PGIRYLSEWINKHSGVVRNSAGSVAP 190 (208)
T ss_dssp CT----TTTHHHHHHHHHCTTTBBCTTSSBCT
T ss_pred CC----CCHHHHHHHHHhCCceeeccCccccC
Confidence 33 24555555566666666666665543
No 351
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.83 E-value=4.3e-20 Score=181.90 Aligned_cols=179 Identities=19% Similarity=0.192 Sum_probs=94.3
Q ss_pred ccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEccC
Q 041467 20 LRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDC 99 (746)
Q Consensus 20 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 99 (746)
-+.++.+++.++ .+|..+ .++|++|+|++|++++..+..|.++++|++|++++|++.+..+..+
T Consensus 9 ~~~v~c~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~------------- 72 (208)
T 2o6s_A 9 GTTVECYSQGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVF------------- 72 (208)
T ss_dssp TTEEECCSSCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTT-------------
T ss_pred CCEEEecCCCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhc-------------
Confidence 357788888886 566544 3578888888888886666667778888888888777653322222
Q ss_pred CCCcCcccCCCCCCEEeccCCCcccccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccc
Q 041467 100 GGRIDSLGHLKSLLLLSLAFNQFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLL 179 (746)
Q Consensus 100 ~~~~~~~~~l~~L~~L~Ls~N~l~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~ 179 (746)
.++++|++|+|++|++++..+..|..+++|++|+|++|.+++.+ +..|
T Consensus 73 --------------------------~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~------~~~~ 120 (208)
T 2o6s_A 73 --------------------------NKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLP------DGVF 120 (208)
T ss_dssp --------------------------TTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC------TTTT
T ss_pred --------------------------CCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccC------HhHh
Confidence 22334444444455555444444555555555555555554321 1223
Q ss_pred cCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCC
Q 041467 180 TNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGE 254 (746)
Q Consensus 180 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 254 (746)
..+++|+.|+|++|++++..+..+..+. +|+.|++++|.+.+ .+++|++|+++.|+++|.+|..++.
T Consensus 121 ~~l~~L~~L~l~~N~l~~~~~~~~~~l~-~L~~L~l~~N~~~~-------~~~~l~~L~~~~n~~~g~ip~~~~~ 187 (208)
T 2o6s_A 121 DKLTQLKDLRLYQNQLKSVPDGVFDRLT-SLQYIWLHDNPWDC-------TCPGIRYLSEWINKHSGVVRNSAGS 187 (208)
T ss_dssp TTCTTCCEEECCSSCCSCCCTTTTTTCT-TCCEEECCSCCBCC-------CTTTTHHHHHHHHHCTTTBBCTTSS
T ss_pred ccCCcCCEEECCCCccceeCHHHhccCC-CccEEEecCCCeec-------CCCCHHHHHHHHHhCCceeeccCcc
Confidence 4444555555555544433333333333 34444444443332 2223444444444444444444443
No 352
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.82 E-value=7e-20 Score=206.12 Aligned_cols=194 Identities=20% Similarity=0.295 Sum_probs=147.9
Q ss_pred CCCEEeccCCCcccccC--CCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEE
Q 041467 111 SLLLLSLAFNQFLSLSN--ASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERL 188 (746)
Q Consensus 111 ~L~~L~Ls~N~l~~l~~--l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L 188 (746)
+|+.|+|++|++..++. .++|+.|+|++|+|+ .+| ..+++|++|+|++|.|+++ |. +.+ +|+.|
T Consensus 60 ~L~~L~Ls~n~L~~lp~~l~~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~i-------p~-l~~--~L~~L 125 (571)
T 3cvr_A 60 QFSELQLNRLNLSSLPDNLPPQITVLEITQNALI-SLP---ELPASLEYLDACDNRLSTL-------PE-LPA--SLKHL 125 (571)
T ss_dssp TCSEEECCSSCCSCCCSCCCTTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSCC-------CC-CCT--TCCEE
T ss_pred CccEEEeCCCCCCccCHhHcCCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCCc-------ch-hhc--CCCEE
Confidence 67788888888765542 468999999999998 455 4578999999999998862 33 333 89999
Q ss_pred EcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCCCceeecccccc
Q 041467 189 YFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHL 268 (746)
Q Consensus 189 ~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 268 (746)
+|++|+|++ +|. .++ +|+.|++++|+|++ +|. .+++|++|+|++|++++ +|. |. ++|+.|+|++|+|
T Consensus 126 ~Ls~N~l~~-lp~---~l~-~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L 192 (571)
T 3cvr_A 126 DVDNNQLTM-LPE---LPA-LLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLL 192 (571)
T ss_dssp ECCSSCCSC-CCC---CCT-TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCC
T ss_pred ECCCCcCCC-CCC---cCc-cccEEeCCCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCC
Confidence 999999986 666 344 79999999999986 665 57889999999999886 666 65 8899999999988
Q ss_pred cccccccccccChHHhhhccCCCCCCccccCCCCCCeeeecCCcCccccchhhhhcccccceEEccCccccccCchhhhc
Q 041467 269 QGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEVGN 348 (746)
Q Consensus 269 ~~~~~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~ 348 (746)
+ .+|. +.. . -+.....|+.|+|++|+|+ .+|..++.++++ ..|+|++|++++.+|..++.
T Consensus 193 ~-~lp~-~~~--~--------------L~~~~~~L~~L~Ls~N~l~-~lp~~l~~l~~L-~~L~L~~N~l~~~~p~~l~~ 252 (571)
T 3cvr_A 193 E-SLPA-VPV--R--------------NHHSEETEIFFRCRENRIT-HIPENILSLDPT-CTIILEDNPLSSRIRESLSQ 252 (571)
T ss_dssp S-SCCC-CC------------------------CCEEEECCSSCCC-CCCGGGGGSCTT-EEEECCSSSCCHHHHHHHHH
T ss_pred C-chhh-HHH--h--------------hhcccccceEEecCCCcce-ecCHHHhcCCCC-CEEEeeCCcCCCcCHHHHHH
Confidence 8 3332 211 0 0122234599999999998 689999999998 68999999999999999887
Q ss_pred ccC
Q 041467 349 LKN 351 (746)
Q Consensus 349 l~~ 351 (746)
+..
T Consensus 253 l~~ 255 (571)
T 3cvr_A 253 QTA 255 (571)
T ss_dssp HHH
T ss_pred hhc
Confidence 654
No 353
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.81 E-value=8.2e-20 Score=195.19 Aligned_cols=200 Identities=13% Similarity=0.101 Sum_probs=140.7
Q ss_pred CEEeccCCCcccccC-C-CCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCE-EE
Q 041467 113 LLLSLAFNQFLSLSN-A-SSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLER-LY 189 (746)
Q Consensus 113 ~~L~Ls~N~l~~l~~-l-~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~-L~ 189 (746)
++++.++|++++++. + +++++|+|++|+|+.+.+.+|.++++|++|+|++|++.+.. -+..|.++++|.. +.
T Consensus 12 ~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i-----~~~~f~~L~~l~~~l~ 86 (350)
T 4ay9_X 12 RVFLCQESKVTEIPSDLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVI-----EADVFSNLPKLHEIRI 86 (350)
T ss_dssp TEEEEESTTCCSCCTTCCTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEE-----CTTSBCSCTTCCEEEE
T ss_pred CEEEecCCCCCccCcCcCCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCcc-----ChhHhhcchhhhhhhc
Confidence 467778888877653 3 57899999999999877788999999999999999875411 1245778888765 66
Q ss_pred cccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeeccc-ccceecCCcCCCCCC-CCceeeccccc
Q 041467 190 FNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMES-SQLIGTIPPLIGETP-NLQLLNIGGNH 267 (746)
Q Consensus 190 Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~-~L~~L~Ls~N~ 267 (746)
++.|++++..|..|..++ +|++|++++|+|++..+..+....++..|++.+ |++....+..|..+. .++.|+|++|+
T Consensus 87 ~~~N~l~~l~~~~f~~l~-~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~ 165 (350)
T 4ay9_X 87 EKANNLLYINPEAFQNLP-NLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNG 165 (350)
T ss_dssp EEETTCCEECTTSBCCCT-TCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSC
T ss_pred ccCCcccccCchhhhhcc-ccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhcccccc
Confidence 677888877788888887 799999999999876666777777888888865 566655566777765 68889999999
Q ss_pred ccccccccccc--cChHHhhh-ccCCCCCCccccCCCCCCeeeecCCcCccccch
Q 041467 268 LQGSILSSLGN--LTLQTYLF-NNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQ 319 (746)
Q Consensus 268 l~~~~~~~l~~--l~~l~~l~-n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 319 (746)
|+...+..+.. +..+.+.. |.+....++.|.++++|++|||++|+|+ .+|.
T Consensus 166 i~~i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~-~lp~ 219 (350)
T 4ay9_X 166 IQEIHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIH-SLPS 219 (350)
T ss_dssp CCEECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCC-CCCS
T ss_pred ccCCChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcC-ccCh
Confidence 88544433322 23333333 3333333345666666666666666666 3443
No 354
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.80 E-value=1.2e-19 Score=206.60 Aligned_cols=188 Identities=23% Similarity=0.313 Sum_probs=106.6
Q ss_pred cccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEE
Q 041467 17 RTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLR 96 (746)
Q Consensus 17 ~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 96 (746)
+..+..++|+.+.+....+ +..|.+|+.|+|++|.|.. +| .|..+++|+.|+|++|.+.+..+ +..+
T Consensus 20 l~~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l------- 86 (605)
T 1m9s_A 20 FAETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNL------- 86 (605)
T ss_dssp HHHHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGC-------
T ss_pred HHHHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccC-------
Confidence 3456777888888875444 5678889999999999874 44 58888899999998888755433 3333
Q ss_pred ccCCCCcCcccCCCCCCEEeccCCCcc---cccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCc
Q 041467 97 IDCGGRIDSLGHLKSLLLLSLAFNQFL---SLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANEL 173 (746)
Q Consensus 97 l~~~~~~~~~~~l~~L~~L~Ls~N~l~---~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 173 (746)
++|+.|+|++|++. .+..+++|+.|+|++|+|++. ..+..+++|+.|+|++|.|++.
T Consensus 87 -------------~~L~~L~Ls~N~l~~l~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l----- 146 (605)
T 1m9s_A 87 -------------KNLGWLFLDENKIKDLSSLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI----- 146 (605)
T ss_dssp -------------TTCCEEECCSSCCCCCTTSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC-----
T ss_pred -------------CCCCEEECcCCCCCCChhhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc-----
Confidence 33333333444332 233445555555555555532 2355555555555555555431
Q ss_pred cccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccce
Q 041467 174 DFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLI 245 (746)
Q Consensus 174 ~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~ 245 (746)
..+..+++|+.|+|++|.+++..| +..++ +|+.|+|++|+|++ + ..+..+++|+.|+|++|.+.
T Consensus 147 ---~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~-~L~~L~Ls~N~i~~-l-~~l~~l~~L~~L~L~~N~l~ 210 (605)
T 1m9s_A 147 ---TVLSRLTKLDTLSLEDNQISDIVP--LAGLT-KLQNLYLSKNHISD-L-RALAGLKNLDVLELFSQECL 210 (605)
T ss_dssp ---GGGGSCTTCSEEECCSSCCCCCGG--GTTCT-TCCEEECCSSCCCB-C-GGGTTCTTCSEEECCSEEEE
T ss_pred ---hhhcccCCCCEEECcCCcCCCchh--hccCC-CCCEEECcCCCCCC-C-hHHccCCCCCEEEccCCcCc
Confidence 234455555555555555554333 44443 45555555555543 2 23444455555555555444
No 355
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.80 E-value=3.2e-22 Score=226.38 Aligned_cols=203 Identities=17% Similarity=0.180 Sum_probs=114.0
Q ss_pred CCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCC-------------CCCccchhhcCCCCCCEEE-ccCCCCcCc
Q 041467 40 RLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNN-------------LVRDILTEICSLFKLERLR-IDCGGRIDS 105 (746)
Q Consensus 40 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~-------------l~~~~~~~~~~l~~L~~L~-l~~~~~~~~ 105 (746)
.+++|+.|+|++|+|+ .+|..++++++|+.|++++|. ..+..|..++.+++|+.|+ ++.+
T Consensus 347 ~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n----- 420 (567)
T 1dce_A 347 TDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAA----- 420 (567)
T ss_dssp TTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHH-----
T ss_pred cCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhc-----
Confidence 3445555555555554 455555555555555554432 3344555555555555554 2221
Q ss_pred ccCCCCCCEEeccCCCcccccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCC
Q 041467 106 LGHLKSLLLLSLAFNQFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKL 185 (746)
Q Consensus 106 ~~~l~~L~~L~Ls~N~l~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L 185 (746)
.+.+|..+.++.|.+..+.. ..|+.|+|++|+|++ +|. |+.+++|+.|+|++|.|+. +|..++++++|
T Consensus 421 --~~~~L~~l~l~~n~i~~l~~-~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~~-------lp~~~~~l~~L 488 (567)
T 1dce_A 421 --YLDDLRSKFLLENSVLKMEY-ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLRA-------LPPALAALRCL 488 (567)
T ss_dssp --HHHHHHHHHHHHHHHHHHHH-TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCCC-------CCGGGGGCTTC
T ss_pred --ccchhhhhhhhcccccccCc-cCceEEEecCCCCCC-CcC-ccccccCcEeecCcccccc-------cchhhhcCCCC
Confidence 12234444445555544332 246667777777765 343 6666777777777776653 44556666667
Q ss_pred CEEEcccccccccCChhhhhcccccceEEcccCcccccC-CccccCCCCCCeeecccccceecCCcC---CCCCCCCcee
Q 041467 186 ERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTI-PHGIRNLVNLNWLTMESSQLIGTIPPL---IGETPNLQLL 261 (746)
Q Consensus 186 ~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p~~---~~~l~~L~~L 261 (746)
+.|+|++|+|++ +| .++.++ +|+.|+|++|+|++.. |..|+.+++|+.|+|++|.+++.+|.. +..+++|+.|
T Consensus 489 ~~L~Ls~N~l~~-lp-~l~~l~-~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L 565 (567)
T 1dce_A 489 EVLQASDNALEN-VD-GVANLP-RLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSI 565 (567)
T ss_dssp CEEECCSSCCCC-CG-GGTTCS-SCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEE
T ss_pred CEEECCCCCCCC-Cc-ccCCCC-CCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCcc
Confidence 777777776664 45 566665 5666666666666654 666666666666666666666544321 1225666666
Q ss_pred ec
Q 041467 262 NI 263 (746)
Q Consensus 262 ~L 263 (746)
++
T Consensus 566 ~l 567 (567)
T 1dce_A 566 LT 567 (567)
T ss_dssp EC
T ss_pred CC
Confidence 43
No 356
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.79 E-value=5.2e-19 Score=183.62 Aligned_cols=168 Identities=23% Similarity=0.382 Sum_probs=104.4
Q ss_pred cCCCCCCEEeccCCCccc---ccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCC
Q 041467 107 GHLKSLLLLSLAFNQFLS---LSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCS 183 (746)
Q Consensus 107 ~~l~~L~~L~Ls~N~l~~---l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~ 183 (746)
..+++|+.|++++|.+.. +..+++|+.|+|++|++++..+ +..+++|++|+|++|.++. + ..+..++
T Consensus 43 ~~l~~L~~L~l~~~~i~~~~~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-------~-~~l~~l~ 112 (291)
T 1h6t_A 43 NELNSIDQIIANNSDIKSVQGIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-------L-SSLKDLK 112 (291)
T ss_dssp HHHHTCCEEECTTSCCCCCTTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-------G-GGGTTCT
T ss_pred hhcCcccEEEccCCCcccChhHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-------C-hhhccCC
Confidence 345556666666666533 3456677777777777765444 6677777777777777654 2 2366667
Q ss_pred CCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCCCceeec
Q 041467 184 KLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNI 263 (746)
Q Consensus 184 ~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 263 (746)
+|++|++++|++++ + ..+..++ +|+.|++++|++++. ..+..+++|++|++++|++.+..| +..+++|+.|+|
T Consensus 113 ~L~~L~L~~n~i~~-~-~~l~~l~-~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L 185 (291)
T 1h6t_A 113 KLKSLSLEHNGISD-I-NGLVHLP-QLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYL 185 (291)
T ss_dssp TCCEEECTTSCCCC-C-GGGGGCT-TCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEEC
T ss_pred CCCEEECCCCcCCC-C-hhhcCCC-CCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEEC
Confidence 77777777777664 2 3455555 577777777776653 456666667777777666665433 666666666666
Q ss_pred ccccccccccccccccChHHhhhccCCCCCCccccCCCCCCeeeecCCcCc
Q 041467 264 GGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLT 314 (746)
Q Consensus 264 s~N~l~~~~~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 314 (746)
++|.+++ +| .+..+++|+.|++++|+++
T Consensus 186 ~~N~i~~----------------------l~-~l~~l~~L~~L~l~~n~i~ 213 (291)
T 1h6t_A 186 SKNHISD----------------------LR-ALAGLKNLDVLELFSQECL 213 (291)
T ss_dssp CSSCCCB----------------------CG-GGTTCTTCSEEEEEEEEEE
T ss_pred CCCcCCC----------------------Ch-hhccCCCCCEEECcCCccc
Confidence 6666652 12 2455666666666666665
No 357
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.78 E-value=1.6e-18 Score=179.98 Aligned_cols=167 Identities=26% Similarity=0.333 Sum_probs=103.3
Q ss_pred cccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEE
Q 041467 17 RTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLR 96 (746)
Q Consensus 17 ~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 96 (746)
+++|++|++++|.+. .+| .+..+++|++|+|++|++++..| +.++++|+.|+|++|.+.+ +
T Consensus 45 l~~L~~L~l~~~~i~-~~~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~-------------- 105 (291)
T 1h6t_A 45 LNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-L-------------- 105 (291)
T ss_dssp HHTCCEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-G--------------
T ss_pred cCcccEEEccCCCcc-cCh-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-C--------------
Confidence 344555555555554 222 24555555555555555553222 5555555555555555432 1
Q ss_pred ccCCCCcCcccCCCCCCEEeccCCCcc---cccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCc
Q 041467 97 IDCGGRIDSLGHLKSLLLLSLAFNQFL---SLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANEL 173 (746)
Q Consensus 97 l~~~~~~~~~~~l~~L~~L~Ls~N~l~---~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 173 (746)
..+..+++|+.|+|++|++. .+..+++|+.|++++|++++. ..+..+++|++|+|++|.+++
T Consensus 106 -------~~l~~l~~L~~L~L~~n~i~~~~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~------ 170 (291)
T 1h6t_A 106 -------SSLKDLKKLKSLSLEHNGISDINGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISD------ 170 (291)
T ss_dssp -------GGGTTCTTCCEEECTTSCCCCCGGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCC------
T ss_pred -------hhhccCCCCCEEECCCCcCCCChhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCcccc------
Confidence 23556666666666666663 345677777888888877764 467777888888888887765
Q ss_pred cccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccc
Q 041467 174 DFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISS 222 (746)
Q Consensus 174 ~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~ 222 (746)
.+. +..+++|+.|++++|.+++ +| .+..++ +|+.|++++|+++.
T Consensus 171 -~~~-l~~l~~L~~L~L~~N~i~~-l~-~l~~l~-~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 171 -IVP-LAGLTKLQNLYLSKNHISD-LR-ALAGLK-NLDVLELFSQECLN 214 (291)
T ss_dssp -CGG-GTTCTTCCEEECCSSCCCB-CG-GGTTCT-TCSEEEEEEEEEEC
T ss_pred -chh-hcCCCccCEEECCCCcCCC-Ch-hhccCC-CCCEEECcCCcccC
Confidence 222 6777788888888887774 44 366666 68888888887764
No 358
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.77 E-value=1.7e-21 Score=220.50 Aligned_cols=186 Identities=18% Similarity=0.220 Sum_probs=155.2
Q ss_pred cCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEccCCC-----------------CcCcccCCCCCCEEe-ccCCCccc
Q 041467 63 SSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDCGG-----------------RIDSLGHLKSLLLLS-LAFNQFLS 124 (746)
Q Consensus 63 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~-----------------~~~~~~~l~~L~~L~-Ls~N~l~~ 124 (746)
..+++|+.|+|++|.+ +.+|..++++++|+.|+++++. .+..++++++|+.|+ ++.|.+
T Consensus 346 ~~~~~L~~L~Ls~n~L-~~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~-- 422 (567)
T 1dce_A 346 ATDEQLFRCELSVEKS-TVLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYL-- 422 (567)
T ss_dssp STTTTSSSCCCCHHHH-HHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHH--
T ss_pred ccCccceeccCChhhH-HhhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhccc--
Confidence 6789999999999998 5789999999999999986542 113456667777776 565544
Q ss_pred ccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhh
Q 041467 125 LSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIA 204 (746)
Q Consensus 125 l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 204 (746)
.+|..+.+++|.|+...+ ..|+.|+|++|.|++ +|. ++.+++|+.|+|++|+|+ .+|..++
T Consensus 423 ----~~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~-------lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~ 483 (567)
T 1dce_A 423 ----DDLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTV-------LCH-LEQLLLVTHLDLSHNRLR-ALPPALA 483 (567)
T ss_dssp ----HHHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSS-------CCC-GGGGTTCCEEECCSSCCC-CCCGGGG
T ss_pred ----chhhhhhhhcccccccCc------cCceEEEecCCCCCC-------CcC-ccccccCcEeecCccccc-ccchhhh
Confidence 345566777888775433 259999999999986 444 788999999999999998 8899999
Q ss_pred hcccccceEEcccCcccccCCccccCCCCCCeeecccccceecC-CcCCCCCCCCceeeccccccccccc
Q 041467 205 NLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTI-PPLIGETPNLQLLNIGGNHLQGSIL 273 (746)
Q Consensus 205 ~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~~ 273 (746)
.++ +|+.|+|++|+|++ +| .|+++++|+.|+|++|++++.. |..++.+++|+.|+|++|.+++.++
T Consensus 484 ~l~-~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 484 ALR-CLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp GCT-TCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSS
T ss_pred cCC-CCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCcc
Confidence 998 79999999999997 67 8999999999999999999887 9999999999999999999986543
No 359
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.77 E-value=2.2e-18 Score=171.08 Aligned_cols=152 Identities=16% Similarity=0.219 Sum_probs=135.7
Q ss_pred CEEeccCCCcccccC--CCCCcEeeCccCcccccCC-ccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEE
Q 041467 113 LLLSLAFNQFLSLSN--ASSLEMIEFSRNQFSGGVS-VDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLY 189 (746)
Q Consensus 113 ~~L~Ls~N~l~~l~~--l~~L~~L~Ls~N~l~~~~~-~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~ 189 (746)
+.+++++|.+..++. ...++.|+|++|+|++..+ ..|..+++|++|+|++|.|++. .+..|.++++|++|+
T Consensus 14 ~~l~~s~n~l~~iP~~~~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i------~~~~~~~l~~L~~L~ 87 (220)
T 2v70_A 14 TTVDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDI------EEGAFEGASGVNEIL 87 (220)
T ss_dssp TEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEE------CTTTTTTCTTCCEEE
T ss_pred CEeEeCCCCcccCccCCCCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEE------CHHHhCCCCCCCEEE
Confidence 578899999877653 3578999999999998855 5689999999999999999873 344688999999999
Q ss_pred cccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCCCceeeccccccc
Q 041467 190 FNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQ 269 (746)
Q Consensus 190 Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 269 (746)
|++|++++..|..|..+. +|++|+|++|+|++..|..|.++++|++|+|++|++++..|..|..+++|+.|+|++|.+.
T Consensus 88 Ls~N~l~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 166 (220)
T 2v70_A 88 LTSNRLENVQHKMFKGLE-SLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFN 166 (220)
T ss_dssp CCSSCCCCCCGGGGTTCS-SCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEE
T ss_pred CCCCccCccCHhHhcCCc-CCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCc
Confidence 999999988888888887 7999999999999988999999999999999999999988999999999999999999998
Q ss_pred cc
Q 041467 270 GS 271 (746)
Q Consensus 270 ~~ 271 (746)
+.
T Consensus 167 c~ 168 (220)
T 2v70_A 167 CN 168 (220)
T ss_dssp CS
T ss_pred CC
Confidence 54
No 360
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.77 E-value=2.9e-18 Score=195.07 Aligned_cols=169 Identities=25% Similarity=0.286 Sum_probs=125.6
Q ss_pred cccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCE
Q 041467 15 ILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLER 94 (746)
Q Consensus 15 ~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 94 (746)
..+++|+.|+|++|.+. .+| .|..+++|+.|+|++|+|++..| +..+++|+.|+|++|.+.+ +| .+.
T Consensus 40 ~~L~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~------- 106 (605)
T 1m9s_A 40 NELNSIDQIIANNSDIK-SVQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLK------- 106 (605)
T ss_dssp HHHTTCCCCBCTTCCCC-CCT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TST-------
T ss_pred hcCCCCCEEECcCCCCC-CCh-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhc-------
Confidence 44789999999999997 455 59999999999999999997544 9999999999999999854 22 344
Q ss_pred EEccCCCCcCcccCCCCCCEEeccCCCcc---cccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCC
Q 041467 95 LRIDCGGRIDSLGHLKSLLLLSLAFNQFL---SLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTAN 171 (746)
Q Consensus 95 L~l~~~~~~~~~~~l~~L~~L~Ls~N~l~---~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 171 (746)
.+++|+.|+|++|++. .+..+++|+.|+|++|+|++. ..|..+++|+.|+|++|.|++.
T Consensus 107 -------------~l~~L~~L~Ls~N~l~~l~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~--- 168 (605)
T 1m9s_A 107 -------------DLKKLKSLSLEHNGISDINGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDI--- 168 (605)
T ss_dssp -------------TCTTCCEEECTTSCCCCCGGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCC---
T ss_pred -------------cCCCCCEEEecCCCCCCCccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCc---
Confidence 4455555555555553 345667777777777777754 4677777888888888877652
Q ss_pred CccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccc
Q 041467 172 ELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISS 222 (746)
Q Consensus 172 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~ 222 (746)
.| +..+++|+.|+|++|.|++ +| .+..++ +|+.|+|++|.+++
T Consensus 169 ---~~--l~~l~~L~~L~Ls~N~i~~-l~-~l~~l~-~L~~L~L~~N~l~~ 211 (605)
T 1m9s_A 169 ---VP--LAGLTKLQNLYLSKNHISD-LR-ALAGLK-NLDVLELFSQECLN 211 (605)
T ss_dssp ---GG--GTTCTTCCEEECCSSCCCB-CG-GGTTCT-TCSEEECCSEEEEC
T ss_pred ---hh--hccCCCCCEEECcCCCCCC-Ch-HHccCC-CCCEEEccCCcCcC
Confidence 22 6777788888888887774 33 466666 68888888887775
No 361
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.77 E-value=2.7e-18 Score=184.12 Aligned_cols=181 Identities=17% Similarity=0.203 Sum_probs=122.4
Q ss_pred cEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCcccccccc-CCCCCCEEEcccccccccCChhhhhccccc
Q 041467 132 EMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLT-NCSKLERLYFNRNGFEGVLPHSIANLSSTI 210 (746)
Q Consensus 132 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L 210 (746)
+.+++++|+++. +|..+. +.++.|+|++|+|++.. +..+. ++++|+.|+|++|+|++..|..|..+. +|
T Consensus 21 ~~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~------~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~-~L 90 (361)
T 2xot_A 21 NILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLR------AEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVP-NL 90 (361)
T ss_dssp TEEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEEC------TTSSSSCCTTCCEEECCSSCCCEECTTTTTTCT-TC
T ss_pred CEEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccC------hhhhhhcccccCEEECCCCcCCccChhhccCCC-CC
Confidence 456666666664 343332 34677777777776522 23344 677777777777777766666677776 68
Q ss_pred ceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCCCceeecccccccccccccccccChHHhhhccCC
Q 041467 211 KQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQ 290 (746)
Q Consensus 211 ~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~l~~l~n~l~ 290 (746)
++|+|++|+|++..+..|.++++|++|+|++|++.+..|..|.++++|+.|+|++|+|++..+..+.
T Consensus 91 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~------------- 157 (361)
T 2xot_A 91 RYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIK------------- 157 (361)
T ss_dssp CEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC-------------
T ss_pred CEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhc-------------
Confidence 8888888888776666788888888888888888877788888888888888888887732211110
Q ss_pred CCCCccccCCCCCCeeeecCCcCccccchhhhhcccc-cceEEccCccccc
Q 041467 291 GNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTL-SLYLELDNNLLNG 340 (746)
Q Consensus 291 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l-~~~L~Ls~N~l~~ 340 (746)
.+..+++|+.|+|++|+|++..+..+..+..+ +..|+|++|++..
T Consensus 158 -----~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C 203 (361)
T 2xot_A 158 -----DGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLEC 203 (361)
T ss_dssp ---------CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEEC
T ss_pred -----CcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCccC
Confidence 01467788888888888885444566666653 2468888888864
No 362
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.76 E-value=3.5e-18 Score=169.57 Aligned_cols=151 Identities=15% Similarity=0.184 Sum_probs=134.6
Q ss_pred CEEeccCCCcccccC--CCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEc
Q 041467 113 LLLSLAFNQFLSLSN--ASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYF 190 (746)
Q Consensus 113 ~~L~Ls~N~l~~l~~--l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~L 190 (746)
+.+++++|.+..++. .++|+.|+|++|+|++..+..|..+++|++|+|++|.+++ ..|..|.++++|++|+|
T Consensus 14 ~~v~c~~~~l~~iP~~l~~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~------~~~~~~~~l~~L~~L~L 87 (220)
T 2v9t_B 14 NIVDCRGKGLTEIPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISE------LAPDAFQGLRSLNSLVL 87 (220)
T ss_dssp TEEECTTSCCSSCCSSCCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCE------ECTTTTTTCSSCCEEEC
T ss_pred CEEEcCCCCcCcCCCccCcCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCC------cCHHHhhCCcCCCEEEC
Confidence 567888888876653 3589999999999999888899999999999999999987 34677899999999999
Q ss_pred ccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCCCceeecccccccc
Q 041467 191 NRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQG 270 (746)
Q Consensus 191 s~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 270 (746)
++|+|++..+..|..+. +|+.|+|++|+|++..|..|.++++|++|+|++|++.+..+..|..+++|+.|+|++|.+..
T Consensus 88 s~N~l~~l~~~~f~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 88 YGNKITELPKSLFEGLF-SLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp CSSCCCCCCTTTTTTCT-TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CCCcCCccCHhHccCCC-CCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 99999966555677787 79999999999999889999999999999999999998888889999999999999999874
No 363
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.76 E-value=2.8e-18 Score=184.01 Aligned_cols=175 Identities=22% Similarity=0.237 Sum_probs=146.4
Q ss_pred CEEeccCCCcccccC--CCCCcEeeCccCcccccCCcccc-CCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEE
Q 041467 113 LLLSLAFNQFLSLSN--ASSLEMIEFSRNQFSGGVSVDFS-RLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLY 189 (746)
Q Consensus 113 ~~L~Ls~N~l~~l~~--l~~L~~L~Ls~N~l~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~ 189 (746)
+.+++++|++..++. ...++.|+|++|+|++..+..|. ++++|++|+|++|+|++. .+..|.++++|++|+
T Consensus 21 ~~l~c~~~~l~~iP~~~~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i------~~~~~~~l~~L~~L~ 94 (361)
T 2xot_A 21 NILSCSKQQLPNVPQSLPSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFI------SSEAFVPVPNLRYLD 94 (361)
T ss_dssp TEEECCSSCCSSCCSSCCTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEE------CTTTTTTCTTCCEEE
T ss_pred CEEEeCCCCcCccCccCCCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCcc------ChhhccCCCCCCEEE
Confidence 578899998877753 35689999999999999888888 999999999999999873 345688999999999
Q ss_pred cccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCC---CCCCCCceeecccc
Q 041467 190 FNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLI---GETPNLQLLNIGGN 266 (746)
Q Consensus 190 Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~---~~l~~L~~L~Ls~N 266 (746)
|++|+|++..+..|..+. +|+.|+|++|+|++..|..|.++++|+.|+|++|++.+..+..| ..+++|+.|+|++|
T Consensus 95 Ls~N~l~~~~~~~~~~l~-~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N 173 (361)
T 2xot_A 95 LSSNHLHTLDEFLFSDLQ-ALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSN 173 (361)
T ss_dssp CCSSCCCEECTTTTTTCT-TCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSS
T ss_pred CCCCcCCcCCHHHhCCCc-CCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCC
Confidence 999999987777888887 79999999999999889999999999999999999986555555 67999999999999
Q ss_pred cccccccccccccChHHhhhccCCCCCCccccCCCC--CCeeeecCCcCcc
Q 041467 267 HLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKS--LLGLSVSHNKLTS 315 (746)
Q Consensus 267 ~l~~~~~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~--L~~L~Ls~N~l~~ 315 (746)
+|++..+..+ ..++. |+.|+|++|.+.-
T Consensus 174 ~l~~l~~~~~---------------------~~l~~~~l~~l~l~~N~~~C 203 (361)
T 2xot_A 174 KLKKLPLTDL---------------------QKLPAWVKNGLYLHNNPLEC 203 (361)
T ss_dssp CCCCCCHHHH---------------------HHSCHHHHTTEECCSSCEEC
T ss_pred CCCccCHHHh---------------------hhccHhhcceEEecCCCccC
Confidence 9985443333 33333 4789999999873
No 364
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.75 E-value=6.5e-18 Score=167.69 Aligned_cols=152 Identities=20% Similarity=0.217 Sum_probs=80.5
Q ss_pred cEEecccCcCcccCchhhhCCccCcEEecccCcCCccCC-ccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEccC
Q 041467 21 RYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIP-ANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDC 99 (746)
Q Consensus 21 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 99 (746)
+.+++++|.++ .+|..+. ..+++|+|++|+|++..| ..|.++++|+.|+|++|.+.+..+..
T Consensus 14 ~~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~-------------- 76 (220)
T 2v70_A 14 TTVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGA-------------- 76 (220)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTT--------------
T ss_pred CEeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHH--------------
Confidence 47777777776 4665543 345677777777765433 33556666666666666553322221
Q ss_pred CCCcCcccCCCCCCEEeccCCCcccccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccc
Q 041467 100 GGRIDSLGHLKSLLLLSLAFNQFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLL 179 (746)
Q Consensus 100 ~~~~~~~~~l~~L~~L~Ls~N~l~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~ 179 (746)
|.++++|++|+|++|+|++..+..|..+++|++|+|++|.|++ ..+..|
T Consensus 77 -------------------------~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~------~~~~~~ 125 (220)
T 2v70_A 77 -------------------------FEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITC------VGNDSF 125 (220)
T ss_dssp -------------------------TTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCC------BCTTSS
T ss_pred -------------------------hCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCe------ECHhHc
Confidence 2233445555555566655555555555555555555555554 123334
Q ss_pred cCCCCCCEEEcccccccccCChhhhhcccccceEEcccCccc
Q 041467 180 TNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRIS 221 (746)
Q Consensus 180 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~ 221 (746)
.++++|+.|+|++|++++..|..|..+. +|+.|++++|.++
T Consensus 126 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~-~L~~L~L~~N~l~ 166 (220)
T 2v70_A 126 IGLSSVRLLSLYDNQITTVAPGAFDTLH-SLSTLNLLANPFN 166 (220)
T ss_dssp TTCTTCSEEECTTSCCCCBCTTTTTTCT-TCCEEECCSCCEE
T ss_pred CCCccCCEEECCCCcCCEECHHHhcCCC-CCCEEEecCcCCc
Confidence 4455555555555555544444444443 3444444444444
No 365
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.75 E-value=7.8e-19 Score=179.39 Aligned_cols=82 Identities=16% Similarity=0.317 Sum_probs=40.3
Q ss_pred CCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCCCceee
Q 041467 183 SKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLN 262 (746)
Q Consensus 183 ~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 262 (746)
++|+.|+|++|++++ +| .+..++ +|+.|++++|+|++. | .++.+++|++|+|++|++.+. ..+..+++|+.|+
T Consensus 106 ~~L~~L~L~~N~l~~-~~-~l~~l~-~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~--~~l~~l~~L~~L~ 178 (263)
T 1xeu_A 106 ACLSRLFLDNNELRD-TD-SLIHLK-NLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT--GGLTRLKKVNWID 178 (263)
T ss_dssp SSCCEEECCSSCCSB-SG-GGTTCT-TCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC--TTSTTCCCCCEEE
T ss_pred CcccEEEccCCccCC-Ch-hhcCcc-cccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcch--HHhccCCCCCEEe
Confidence 344444444444442 12 244443 345555555554432 2 345555555555555555543 4455566666666
Q ss_pred ccccccccc
Q 041467 263 IGGNHLQGS 271 (746)
Q Consensus 263 Ls~N~l~~~ 271 (746)
+++|.+++.
T Consensus 179 l~~N~~~~~ 187 (263)
T 1xeu_A 179 LTGQKCVNE 187 (263)
T ss_dssp EEEEEEECC
T ss_pred CCCCcccCC
Confidence 666665543
No 366
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.74 E-value=1.2e-17 Score=165.76 Aligned_cols=152 Identities=14% Similarity=0.254 Sum_probs=103.6
Q ss_pred cEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhcccccc
Q 041467 132 EMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIK 211 (746)
Q Consensus 132 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~ 211 (746)
+.+++++|.++. +|..+. ++|+.|+|++|.|+.. .+..|..+++|+.|+|++|++++..|..|..+. +|+
T Consensus 14 ~~v~c~~~~l~~-iP~~l~--~~l~~L~l~~n~i~~i------~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~-~L~ 83 (220)
T 2v9t_B 14 NIVDCRGKGLTE-IPTNLP--ETITEIRLEQNTIKVI------PPGAFSPYKKLRRIDLSNNQISELAPDAFQGLR-SLN 83 (220)
T ss_dssp TEEECTTSCCSS-CCSSCC--TTCCEEECCSSCCCEE------CTTSSTTCTTCCEEECCSSCCCEECTTTTTTCS-SCC
T ss_pred CEEEcCCCCcCc-CCCccC--cCCCEEECCCCcCCCc------CHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCc-CCC
Confidence 567777777774 344333 5777777777777652 223566777777777777777766677777776 577
Q ss_pred eEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCCCceeecccccccccccccccccChHHhhhccCCC
Q 041467 212 QIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQG 291 (746)
Q Consensus 212 ~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~l~~l~n~l~~ 291 (746)
+|+|++|+|+...+..|.++++|++|+|++|++.+..|..|..+++|++|+|++|+|++
T Consensus 84 ~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~--------------------- 142 (220)
T 2v9t_B 84 SLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQT--------------------- 142 (220)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSC---------------------
T ss_pred EEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCE---------------------
Confidence 77777777775555556777777777777777777667777777777777777776663
Q ss_pred CCCccccCCCCCCeeeecCCcCc
Q 041467 292 NIPSSLANCKSLLGLSVSHNKLT 314 (746)
Q Consensus 292 ~~p~~~~~l~~L~~L~Ls~N~l~ 314 (746)
..+..|..+++|+.|+|++|.+.
T Consensus 143 ~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 143 IAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp CCTTTTTTCTTCCEEECCSSCEE
T ss_pred ECHHHHhCCCCCCEEEeCCCCcC
Confidence 22334556667777777777765
No 367
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.74 E-value=1.8e-17 Score=165.62 Aligned_cols=152 Identities=20% Similarity=0.268 Sum_probs=135.0
Q ss_pred CCEEeccCCCcccccC--CCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEE
Q 041467 112 LLLLSLAFNQFLSLSN--ASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLY 189 (746)
Q Consensus 112 L~~L~Ls~N~l~~l~~--l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~ 189 (746)
-+.++++++++..++. .++|+.|+|++|+|++..|..|..+++|++|+|++|.|+..+ +..|..+++|+.|+
T Consensus 21 ~~~v~c~~~~l~~ip~~~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~------~~~~~~l~~L~~L~ 94 (229)
T 3e6j_A 21 GTTVDCRSKRHASVPAGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALP------VGVFDSLTQLTVLD 94 (229)
T ss_dssp TTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCC------TTTTTTCTTCCEEE
T ss_pred CCEeEccCCCcCccCCCCCCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcC------hhhcccCCCcCEEE
Confidence 5678888888877653 579999999999999999999999999999999999997633 34578899999999
Q ss_pred cccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCCCceeeccccccc
Q 041467 190 FNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQ 269 (746)
Q Consensus 190 Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 269 (746)
|++|+|++..+..|..+. +|+.|++++|+|+ .+|..+..+++|+.|+|++|++.+..+..|..+++|+.|+|++|.+.
T Consensus 95 Ls~N~l~~l~~~~~~~l~-~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 172 (229)
T 3e6j_A 95 LGTNQLTVLPSAVFDRLV-HLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWD 172 (229)
T ss_dssp CCSSCCCCCCTTTTTTCT-TCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBC
T ss_pred CCCCcCCccChhHhCcch-hhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCcc
Confidence 999999977777778887 7999999999999 68999999999999999999999877788999999999999999998
Q ss_pred cc
Q 041467 270 GS 271 (746)
Q Consensus 270 ~~ 271 (746)
..
T Consensus 173 c~ 174 (229)
T 3e6j_A 173 CE 174 (229)
T ss_dssp TT
T ss_pred CC
Confidence 54
No 368
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.73 E-value=2.9e-18 Score=200.01 Aligned_cols=161 Identities=20% Similarity=0.244 Sum_probs=117.2
Q ss_pred EeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhcccccce
Q 041467 133 MIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQ 212 (746)
Q Consensus 133 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~ 212 (746)
.++++.|++. ..+..|..+++|+.|+|++|.+.. +|..+.++++|++|+|++|.|+ .+|..|+.+. +|+.
T Consensus 205 ~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~~-------l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~-~L~~ 274 (727)
T 4b8c_D 205 EDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIFN-------ISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLS-NLRV 274 (727)
T ss_dssp ------------------CCCCCCEEECTTSCCSC-------CCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGT-TCCE
T ss_pred Ccccccccee-cChhhhccCCCCcEEECCCCCCCC-------CChhhcCCCCCCEEEeeCCcCc-ccChhhhCCC-CCCE
Confidence 3344455555 568889999999999999999975 4555668999999999999998 8999999998 7999
Q ss_pred EEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCCCceeecccccccccccccccccCh----HHhhhcc
Q 041467 213 IAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTL----QTYLFNN 288 (746)
Q Consensus 213 L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~----l~~l~n~ 288 (746)
|+|++|+|+ .+|..|++|++|++|+|++|.+. .+|..|+.+++|+.|+|++|.|++.+|..+..+.. +.+.+|.
T Consensus 275 L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~ 352 (727)
T 4b8c_D 275 LDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNR 352 (727)
T ss_dssp EECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCC
T ss_pred EeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCc
Confidence 999999999 68999999999999999999997 78888999999999999999999988887765432 2334666
Q ss_pred CCCCCCccccCCCCCCeeeecCC
Q 041467 289 LQGNIPSSLANCKSLLGLSVSHN 311 (746)
Q Consensus 289 l~~~~p~~~~~l~~L~~L~Ls~N 311 (746)
+++.+|.. |..|++++|
T Consensus 353 l~~~~p~~------l~~l~l~~n 369 (727)
T 4b8c_D 353 PEIPLPHE------RRFIEINTD 369 (727)
T ss_dssp CCCCCCCC---------------
T ss_pred ccCcCccc------cceeEeecc
Confidence 66666653 334455555
No 369
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.73 E-value=4.3e-18 Score=173.88 Aligned_cols=166 Identities=20% Similarity=0.231 Sum_probs=103.8
Q ss_pred cccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEE
Q 041467 17 RTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLR 96 (746)
Q Consensus 17 ~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 96 (746)
+..+..+++++|.++ .++ .+..+++|++|++++|.|+ .+| .+..+++|+.|+|++|.+.+..+ +.++++|+.|+
T Consensus 18 l~~l~~l~l~~~~i~-~~~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~ 91 (263)
T 1xeu_A 18 LANAVKQNLGKQSVT-DLV-SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELS 91 (263)
T ss_dssp HHHHHHHHHTCSCTT-SEE-CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEE
T ss_pred HHHHHHHHhcCCCcc-ccc-chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEE
Confidence 566888899999997 444 6888999999999999998 466 68889999999999998865433 66666665555
Q ss_pred ccCCCCcCcccCCCCCCEEeccCCCcccc---cCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCc
Q 041467 97 IDCGGRIDSLGHLKSLLLLSLAFNQFLSL---SNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANEL 173 (746)
Q Consensus 97 l~~~~~~~~~~~l~~L~~L~Ls~N~l~~l---~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 173 (746)
+++| ++..+ .. ++|+.|+|++|+|++. ..+..+++|++|+|++|++++.
T Consensus 92 L~~N--------------------~l~~l~~~~~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~----- 143 (263)
T 1xeu_A 92 VNRN--------------------RLKNLNGIPS-ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI----- 143 (263)
T ss_dssp CCSS--------------------CCSCCTTCCC-SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-----
T ss_pred CCCC--------------------ccCCcCcccc-CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-----
Confidence 5554 33222 12 4555555555555542 2355555555555555555431
Q ss_pred cccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccc
Q 041467 174 DFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISS 222 (746)
Q Consensus 174 ~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~ 222 (746)
+ .+..+++|+.|++++|++++. ..+..++ +|+.|++++|.+++
T Consensus 144 --~-~l~~l~~L~~L~L~~N~i~~~--~~l~~l~-~L~~L~l~~N~~~~ 186 (263)
T 1xeu_A 144 --V-MLGFLSKLEVLDLHGNEITNT--GGLTRLK-KVNWIDLTGQKCVN 186 (263)
T ss_dssp --G-GGGGCTTCCEEECTTSCCCBC--TTSTTCC-CCCEEEEEEEEEEC
T ss_pred --h-HHccCCCCCEEECCCCcCcch--HHhccCC-CCCEEeCCCCcccC
Confidence 1 344555555555555555543 3444444 45555555555553
No 370
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.73 E-value=7.1e-18 Score=164.40 Aligned_cols=130 Identities=18% Similarity=0.225 Sum_probs=66.6
Q ss_pred CCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhcc
Q 041467 128 ASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLS 207 (746)
Q Consensus 128 l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 207 (746)
+++|+.|++++|.++ .+| .+..+++|++|++++|.++. +..+..+++|++|++++|.+++..|..+..++
T Consensus 43 l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~--------~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~ 112 (197)
T 4ezg_A 43 MNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATN--------YNPISGLSNLERLRIMGKDVTSDKIPNLSGLT 112 (197)
T ss_dssp HHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSC--------CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCT
T ss_pred cCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCc--------chhhhcCCCCCEEEeECCccCcccChhhcCCC
Confidence 344555555555555 223 35555555666665554432 12345555555555555555544455555554
Q ss_pred cccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCCCceeeccccccc
Q 041467 208 STIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQ 269 (746)
Q Consensus 208 ~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 269 (746)
+|++|++++|++++..|..|+.+++|++|++++|++.+.+| .+..+++|+.|++++|+++
T Consensus 113 -~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~ 172 (197)
T 4ezg_A 113 -SLTLLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVH 172 (197)
T ss_dssp -TCCEEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEECTTBCCC
T ss_pred -CCCEEEecCCccCcHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEECCCCCCc
Confidence 45555555555554445555555555555555555222333 3455555555555555544
No 371
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.73 E-value=3.1e-17 Score=163.89 Aligned_cols=126 Identities=19% Similarity=0.269 Sum_probs=50.5
Q ss_pred cEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhcccccc
Q 041467 132 EMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIK 211 (746)
Q Consensus 132 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~ 211 (746)
+.+++++++++. +|..+. ++|++|+|++|.+++. .+..|.++++|+.|+|++|+|++..+..|..++ +|+
T Consensus 22 ~~v~c~~~~l~~-ip~~~~--~~L~~L~Ls~n~i~~~------~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~-~L~ 91 (229)
T 3e6j_A 22 TTVDCRSKRHAS-VPAGIP--TNAQILYLHDNQITKL------EPGVFDSLINLKELYLGSNQLGALPVGVFDSLT-QLT 91 (229)
T ss_dssp TEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCC------CTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT-TCC
T ss_pred CEeEccCCCcCc-cCCCCC--CCCCEEEcCCCccCcc------CHHHhhCccCCcEEECCCCCCCCcChhhcccCC-CcC
Confidence 345555555442 222221 4444444444444431 122334444444444444444322222333333 344
Q ss_pred eEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCCCceeecccccc
Q 041467 212 QIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHL 268 (746)
Q Consensus 212 ~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 268 (746)
.|+|++|+|++..+..|..+++|++|+|++|++. .+|..+..+++|++|+|++|+|
T Consensus 92 ~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l 147 (229)
T 3e6j_A 92 VLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQL 147 (229)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCC
T ss_pred EEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcC
Confidence 4444444444333333344444444444444443 3333334444444444444433
No 372
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.73 E-value=2.1e-18 Score=201.29 Aligned_cols=216 Identities=16% Similarity=0.144 Sum_probs=109.7
Q ss_pred cccccEEecccCcCcccCchhhhCCccCc-----EEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCC
Q 041467 17 RTFLRYINLVNNGFNGEIPHQIGRLISLE-----RLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFK 91 (746)
Q Consensus 17 ~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~-----~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 91 (746)
.+.++.|+|.+|.+.. .|..+.....|. .++++.|.+. ..|..|..+++|+.|+|++|.+. .+|..+.+
T Consensus 172 ~~~~~~l~L~~n~~~~-~~~~~l~~l~Ls~~~i~~~~~~~n~~~-~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~--- 245 (727)
T 4b8c_D 172 TPLTPKIELFANGKDE-ANQALLQHKKLSQYSIDEDDDIENRMV-MPKDSKYDDQLWHALDLSNLQIF-NISANIFK--- 245 (727)
T ss_dssp ----------------------------------------------------CCCCCCEEECTTSCCS-CCCGGGGG---
T ss_pred CCccceEEeeCCCCCc-chhhHhhcCccCcccccCcccccccee-cChhhhccCCCCcEEECCCCCCC-CCChhhcC---
Confidence 3568899999999974 454443333322 2334445554 56888999999999999999985 56655444
Q ss_pred CCEEEccCCCCcCcccCCCCCCEEeccCCCcc----cccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCC
Q 041467 92 LERLRIDCGGRIDSLGHLKSLLLLSLAFNQFL----SLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGS 167 (746)
Q Consensus 92 L~~L~l~~~~~~~~~~~l~~L~~L~Ls~N~l~----~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 167 (746)
+++|+.|+|++|.|. .|.++++|++|+|++|+|+ .+|..|+.|++|++|+|++|.|+.
T Consensus 246 -----------------l~~L~~L~Ls~N~l~~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~ 307 (727)
T 4b8c_D 246 -----------------YDFLTRLYLNGNSLTELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVTT 307 (727)
T ss_dssp -----------------CCSCSCCBCTTSCCSCCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCCC
T ss_pred -----------------CCCCCEEEeeCCcCcccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCCc
Confidence 445555556666653 3567888999999999998 668889999999999999999974
Q ss_pred CCCCCccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccc-----
Q 041467 168 GTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESS----- 242 (746)
Q Consensus 168 ~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N----- 242 (746)
+|..|+.+++|+.|+|++|.|++.+|..+..+...+..++|++|.+++.+|.. |..|+++.|
T Consensus 308 -------lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~------l~~l~l~~n~~~~~ 374 (727)
T 4b8c_D 308 -------LPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE------RRFIEINTDGEPQR 374 (727)
T ss_dssp -------CCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC--------------------
T ss_pred -------cChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc------cceeEeeccccccc
Confidence 56668899999999999999999999888776534456789999999888864 456666666
Q ss_pred ---cceecCCcCCCCCCCCceeeccccccc
Q 041467 243 ---QLIGTIPPLIGETPNLQLLNIGGNHLQ 269 (746)
Q Consensus 243 ---~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 269 (746)
.+.+..+..+.++..+....+++|.+.
T Consensus 375 ~~~~l~~~~~~~~~~l~~~~~~~ls~Nil~ 404 (727)
T 4b8c_D 375 EYDSLQQSTEHLATDLAKRTFTVLSYNTLC 404 (727)
T ss_dssp ---------------------------CCC
T ss_pred ccCCccccccchhhcccccceeeeeccccc
Confidence 333333334445555555556666544
No 373
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.70 E-value=4.1e-17 Score=158.99 Aligned_cols=151 Identities=20% Similarity=0.246 Sum_probs=120.2
Q ss_pred cCCCCCCEEeccCCCccc---ccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCC
Q 041467 107 GHLKSLLLLSLAFNQFLS---LSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCS 183 (746)
Q Consensus 107 ~~l~~L~~L~Ls~N~l~~---l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~ 183 (746)
..+++|+.|++++|.+.. +..+++|++|++++|.++. +..+..+++|++|++++|.+++ ..+..+..++
T Consensus 41 ~~l~~L~~L~l~~n~i~~l~~l~~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~------~~~~~l~~l~ 112 (197)
T 4ezg_A 41 AQMNSLTYITLANINVTDLTGIEYAHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTS------DKIPNLSGLT 112 (197)
T ss_dssp HHHHTCCEEEEESSCCSCCTTGGGCTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBG------GGSCCCTTCT
T ss_pred hhcCCccEEeccCCCccChHHHhcCCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCc------ccChhhcCCC
Confidence 456677777777777744 4567889999999997763 3478889999999999999875 3456688899
Q ss_pred CCCEEEcccccccccCChhhhhcccccceEEcccCc-ccccCCccccCCCCCCeeecccccceecCCcCCCCCCCCceee
Q 041467 184 KLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNR-ISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLN 262 (746)
Q Consensus 184 ~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~-i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 262 (746)
+|++|++++|++++..|..+..++ +|+.|++++|+ ++ .+| .+..+++|++|++++|++.+ ++ .+..+++|+.|+
T Consensus 113 ~L~~L~Ls~n~i~~~~~~~l~~l~-~L~~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~ 187 (197)
T 4ezg_A 113 SLTLLDISHSAHDDSILTKINTLP-KVNSIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLY 187 (197)
T ss_dssp TCCEEECCSSBCBGGGHHHHTTCS-SCCEEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEE
T ss_pred CCCEEEecCCccCcHhHHHHhhCC-CCCEEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEE
Confidence 999999999999887888888887 79999999998 65 455 68899999999999999975 44 688899999999
Q ss_pred cccccccc
Q 041467 263 IGGNHLQG 270 (746)
Q Consensus 263 Ls~N~l~~ 270 (746)
+++|++.+
T Consensus 188 l~~N~i~~ 195 (197)
T 4ezg_A 188 AFSQTIGG 195 (197)
T ss_dssp ECBC----
T ss_pred eeCcccCC
Confidence 99998863
No 374
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.69 E-value=1.3e-17 Score=169.84 Aligned_cols=127 Identities=20% Similarity=0.143 Sum_probs=97.7
Q ss_pred CCCCCCeEeecCCeeEEE-----------EEeehhhhhhh------------------------hhhHHHHHHHHHhhcC
Q 041467 481 NFSPANKIREGGFNIVYN-----------VAMKVANLKQK------------------------EASRSFAAEFNALRNI 525 (746)
Q Consensus 481 ~~~~~~~ig~g~~g~v~~-----------vavK~~~~~~~------------------------~~~~~~~~E~~~l~~l 525 (746)
-|+..+.||+|+||.||+ ||||+++.... .....+.+|+++++++
T Consensus 48 ~~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 127 (258)
T 1zth_A 48 ITAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERA 127 (258)
T ss_dssp EEEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHH
T ss_pred chhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHH
Confidence 356788999999999994 79997542210 1123688999999999
Q ss_pred CCCce--eeEEEEEecCCcccchhhhccC-C----cccc--cCCCHHHHHHHHHHHHHHHHHHH-hcCCCCeEEcCCCCC
Q 041467 526 RHRNL--IKIITICSSIDFEGFDFKAISN-G----QLRL--CNLSLTQRVNIAIDVAFAIEYLR-HHCQPSIVHGDLKPS 595 (746)
Q Consensus 526 ~HpnI--v~l~~~~~~~~~~~lv~e~~~~-g----~l~~--~~l~~~~~~~i~~~i~~~l~yLH-~~~~~~ivHrDlkp~ 595 (746)
+|++| +..+++ ...++||||+.+ | .+.. ...++.++..++.|++.|++||| +. +|+||||||+
T Consensus 128 ~~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---givHrDlkp~ 200 (258)
T 1zth_A 128 KEAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRELKELDVEGIFNDVVENVKRLYQEA---ELVHADLSEY 200 (258)
T ss_dssp HHTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGGGGGSCHHHHHHHHHHHHHHHHHTS---CEECSSCSTT
T ss_pred HhCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhccChHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHH
Confidence 98864 444442 367899999942 4 3331 12335678899999999999999 88 9999999999
Q ss_pred CeeeCCCCcEEEccccccccc
Q 041467 596 NILLDQDVVTHVGDLGLAKFL 616 (746)
Q Consensus 596 NILl~~~~~~ki~DfGla~~~ 616 (746)
|||+++ .++|+|||+|...
T Consensus 201 NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 201 NIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp SEEESS--SEEECCCTTCEET
T ss_pred HEEEcC--cEEEEECcccccC
Confidence 999998 9999999999764
No 375
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.67 E-value=3e-16 Score=152.12 Aligned_cols=133 Identities=20% Similarity=0.221 Sum_probs=101.2
Q ss_pred ccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCc-cccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEcc
Q 041467 20 LRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPA-NLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRID 98 (746)
Q Consensus 20 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 98 (746)
-+++++++|+++ .+|..+.. +|++|+|++|+|++..+. .|+.+++|++|+|++|.+.+..|..|.
T Consensus 10 ~~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~----------- 75 (192)
T 1w8a_A 10 GTTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFE----------- 75 (192)
T ss_dssp TTEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTT-----------
T ss_pred CCEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcC-----------
Confidence 378999999996 78876654 899999999999866554 488999999999999988776665443
Q ss_pred CCCCcCcccCCCCCCEEeccCCCcccccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCcccccc
Q 041467 99 CGGRIDSLGHLKSLLLLSLAFNQFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINL 178 (746)
Q Consensus 99 ~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~ 178 (746)
++++|++|+|++|+|++..+..|.++++|++|+|++|+|++ ..|..
T Consensus 76 ----------------------------~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~------~~~~~ 121 (192)
T 1w8a_A 76 ----------------------------GASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISC------VMPGS 121 (192)
T ss_dssp ----------------------------TCTTCCEEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCE------ECTTS
T ss_pred ----------------------------CcccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCe------eCHHH
Confidence 34455666667777777777777788888888888888876 34556
Q ss_pred ccCCCCCCEEEcccccccccCC
Q 041467 179 LTNCSKLERLYFNRNGFEGVLP 200 (746)
Q Consensus 179 ~~~l~~L~~L~Ls~N~l~~~~p 200 (746)
|..+++|++|+|++|.+.+..+
T Consensus 122 ~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 122 FEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp STTCTTCCEEECTTCCBCCSGG
T ss_pred hhcCCCCCEEEeCCCCccCcCc
Confidence 7777888888888888876554
No 376
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.65 E-value=7.9e-16 Score=149.10 Aligned_cols=132 Identities=20% Similarity=0.318 Sum_probs=112.5
Q ss_pred cEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhcccccc
Q 041467 132 EMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIK 211 (746)
Q Consensus 132 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~ 211 (746)
+.+++++|+++ .+|..+. .+|++|+|++|.+++.+.. ..|..+++|++|+|++|+|++..|..|..+. +|+
T Consensus 11 ~~l~~s~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~-----~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~-~L~ 81 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIP--LHTTELLLNDNELGRISSD-----GLFGRLPHLVKLELKRNQLTGIEPNAFEGAS-HIQ 81 (192)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSCCCCSBCCS-----CSGGGCTTCCEEECCSSCCCCBCTTTTTTCT-TCC
T ss_pred CEEEcCCCCcC-cCccCCC--CCCCEEECCCCcCCccCCc-----cccccCCCCCEEECCCCCCCCcCHhHcCCcc-cCC
Confidence 67888888886 4455443 3899999999998763221 2378889999999999999988899999987 799
Q ss_pred eEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCCCceeecccccccccc
Q 041467 212 QIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSI 272 (746)
Q Consensus 212 ~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 272 (746)
+|+|++|+|++..|..|.++++|++|+|++|++++..|..|..+++|++|+|++|.+.+..
T Consensus 82 ~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 142 (192)
T 1w8a_A 82 ELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNC 142 (192)
T ss_dssp EEECCSCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSG
T ss_pred EEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcC
Confidence 9999999999988888999999999999999999999999999999999999999998654
No 377
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.64 E-value=4.2e-16 Score=164.82 Aligned_cols=236 Identities=10% Similarity=0.049 Sum_probs=118.5
Q ss_pred cccccEEecccCcCc--------------------ccCchhhhC--------CccCcEEecccCcCCccCCccccCCCCC
Q 041467 17 RTFLRYINLVNNGFN--------------------GEIPHQIGR--------LISLERLILSNNSFSCAIPANLSSGSNL 68 (746)
Q Consensus 17 ~~~L~~L~Ls~N~l~--------------------~~~p~~~~~--------l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 68 (746)
+++|++|||++|++. .+.+.+|.+ +++|+.|+|.+ .++.+-+..|.++++|
T Consensus 48 l~~L~~LdLs~n~i~~~~~~~~~~~~~~~~~~~~~~I~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L 126 (329)
T 3sb4_A 48 FPSLKVLDISNAEIKMYSGKAGTYPNGKFYIYMANFVPAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNL 126 (329)
T ss_dssp CTTCCEEEEEEEEECCEEESSSSSGGGCCEEECTTEECTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTC
T ss_pred hccCeEEecCcceeEEecCccccccccccccccccccCHHHhcccccccccccCCCcEEECCc-cccchhHHHhhcCccc
Confidence 678999999999997 122234555 66666666665 5554444556666666
Q ss_pred CeeeCcCCCCCCccchhhcCCCCCCEEEccCCCC--------cCcccCCCCCC-EEeccCCCc-c-----cccCCCCCcE
Q 041467 69 IKLSTDSNNLVRDILTEICSLFKLERLRIDCGGR--------IDSLGHLKSLL-LLSLAFNQF-L-----SLSNASSLEM 133 (746)
Q Consensus 69 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~--------~~~~~~l~~L~-~L~Ls~N~l-~-----~l~~l~~L~~ 133 (746)
+.|++++|.+....+..|.++.++..+.+..... ..+|.++.+|+ .+.+....- . ......+++.
T Consensus 127 ~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~~~~~~~ 206 (329)
T 3sb4_A 127 KICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQPRDINF 206 (329)
T ss_dssp CEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTCCGGGCSE
T ss_pred ceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCCCcHHHHHhhcccCccccce
Confidence 6666666655544444555554444444332100 01233333333 222221111 0 0001233333
Q ss_pred eeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhcccccc-e
Q 041467 134 IEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIK-Q 212 (746)
Q Consensus 134 L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~-~ 212 (746)
+.+.++-...........+++|+.|+|++|.++.++ ...|.+|++|+.|+|.+| ++..-+..|.++. +|+ .
T Consensus 207 l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~------~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~-~L~~~ 278 (329)
T 3sb4_A 207 LTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIP------DFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCG-RLAGT 278 (329)
T ss_dssp EEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEEC------TTTTTTCTTCCEEECCTT-CCEECTTTTTTCT-TCCEE
T ss_pred EEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceec------HhhhhCCCCCCEEECCcc-cceehHHHhhCCh-hccEE
Confidence 433333111000000112556666666666555422 223555666666666655 5444444455554 466 6
Q ss_pred EEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCCCceee
Q 041467 213 IAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLN 262 (746)
Q Consensus 213 L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 262 (746)
+++.+ +++.+-+.+|.++.+|+.|+++.|++....+..|.++++|+.++
T Consensus 279 l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 279 LELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp EEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTTCCCCEEE
T ss_pred EEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCCcchhhhc
Confidence 66655 55544455666666666666666666655555666666666654
No 378
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.63 E-value=7.4e-16 Score=162.96 Aligned_cols=278 Identities=13% Similarity=0.086 Sum_probs=153.1
Q ss_pred cccccEEecccCcCcccCchhhhC-CccCcEEecccCcCC--ccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCC
Q 041467 17 RTFLRYINLVNNGFNGEIPHQIGR-LISLERLILSNNSFS--CAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLE 93 (746)
Q Consensus 17 ~~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 93 (746)
+.+|+.|.++++ +....-..+.. +++|++|||++|+|. ...+.. ++.++.+.+..|.+ |.
T Consensus 24 ~~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~~---~~~~~~~~~~~~~I----~~--------- 86 (329)
T 3sb4_A 24 ANSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAGT---YPNGKFYIYMANFV----PA--------- 86 (329)
T ss_dssp HHHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESSSS---SGGGCCEEECTTEE----CT---------
T ss_pred hCceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCcccc---cccccccccccccc----CH---------
Confidence 345777777764 22222223333 667777777777776 222212 22234444444422 11
Q ss_pred EEEccCCCCcCcccC--------CCCCCEEeccCCCcc-----cccCCCCCcEeeCccCcccccCCccccCCCCCCEEEc
Q 041467 94 RLRIDCGGRIDSLGH--------LKSLLLLSLAFNQFL-----SLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNL 160 (746)
Q Consensus 94 ~L~l~~~~~~~~~~~--------l~~L~~L~Ls~N~l~-----~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 160 (746)
.+|.+ +++|+.|+|+. ++. .|.++++|+.|++++|.++.+.+..|.++.++..+.+
T Consensus 87 ----------~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~ 155 (329)
T 3sb4_A 87 ----------YAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPL 155 (329)
T ss_dssp ----------TTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECT
T ss_pred ----------HHhcccccccccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecC
Confidence 23444 56666666665 442 4567778888888888877777778887777776666
Q ss_pred cCCCC----CCCCCCCccccccccCCCCCC-EEEcccccccccCChhhhhc---ccccceEEcccCcccccCCccccCCC
Q 041467 161 GVNNL----GSGTANELDFINLLTNCSKLE-RLYFNRNGFEGVLPHSIANL---SSTIKQIAMGSNRISSTIPHGIRNLV 232 (746)
Q Consensus 161 s~N~l----~~~~~~~~~~~~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l---~~~L~~L~l~~N~i~~~~p~~~~~l~ 232 (746)
..+.. ... ....|.++..|+ .+.+... +.+|..+... ..+++.+.+.++-...........++
T Consensus 156 ~~~~~~~~~~~i------~~~~f~~~~~L~~~i~~~~~---~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~ 226 (329)
T 3sb4_A 156 GSSDAYRFKNRW------EHFAFIEGEPLETTIQVGAM---GKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMP 226 (329)
T ss_dssp TCTHHHHTSTTT------TTSCEEESCCCEEEEEECTT---CCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCT
T ss_pred cchhhhhccccc------cccccccccccceeEEecCC---CcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcC
Confidence 55321 110 112344555666 4444332 2233333211 12455555554422211111112367
Q ss_pred CCCeeecccccceecCCcCCCCCCCCceeecccccccccccccccccChHHhhhccCCCCCCccccCCCCCC-eeeecCC
Q 041467 233 NLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLL-GLSVSHN 311 (746)
Q Consensus 233 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~-~L~Ls~N 311 (746)
+|+.|+|++|+++...+..|.++++|+.|+|++| ++. ..+.+|.+|.+|+ .+++.+
T Consensus 227 ~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~---------------------I~~~aF~~~~~L~~~l~l~~- 283 (329)
T 3sb4_A 227 NLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKT---------------------IGQRVFSNCGRLAGTLELPA- 283 (329)
T ss_dssp TCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCE---------------------ECTTTTTTCTTCCEEEEECT-
T ss_pred CCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cce---------------------ehHHHhhCChhccEEEEEcc-
Confidence 7777777777777666667777777777777766 431 2234566777777 777766
Q ss_pred cCccccchhhhhcccccceEEccCccccccCchhhhcccCCcee
Q 041467 312 KLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNLKNLLRL 355 (746)
Q Consensus 312 ~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L 355 (746)
+++..-+..|..+.+| +.+++++|.++..-+..|.++++|+.+
T Consensus 284 ~l~~I~~~aF~~c~~L-~~l~l~~n~i~~I~~~aF~~~~~L~~l 326 (329)
T 3sb4_A 284 SVTAIEFGAFMGCDNL-RYVLATGDKITTLGDELFGNGVPSKLI 326 (329)
T ss_dssp TCCEECTTTTTTCTTE-EEEEECSSCCCEECTTTTCTTCCCCEE
T ss_pred cceEEchhhhhCCccC-CEEEeCCCccCccchhhhcCCcchhhh
Confidence 5654444566666776 467777777765555566666666554
No 379
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.63 E-value=8.9e-16 Score=145.33 Aligned_cols=135 Identities=17% Similarity=0.182 Sum_probs=117.9
Q ss_pred CCCCCcEeeCccCccc-ccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhh
Q 041467 127 NASSLEMIEFSRNQFS-GGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIAN 205 (746)
Q Consensus 127 ~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 205 (746)
..++|+.|++++|+++ +.+|..+..+++|++|+|++|.+++. ..+..+++|++|+|++|++++.+|..+..
T Consensus 22 ~~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--------~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 93 (168)
T 2ell_A 22 TPAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--------SNLPKLPKLKKLELSENRIFGGLDMLAEK 93 (168)
T ss_dssp CTTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--------SSCCCCSSCCEEEEESCCCCSCCCHHHHH
T ss_pred CcccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--------hhhccCCCCCEEECcCCcCchHHHHHHhh
Confidence 3478999999999998 67788889999999999999999862 45788999999999999999878888888
Q ss_pred cccccceEEcccCcccccC-CccccCCCCCCeeecccccceecCC---cCCCCCCCCceeecccccccc
Q 041467 206 LSSTIKQIAMGSNRISSTI-PHGIRNLVNLNWLTMESSQLIGTIP---PLIGETPNLQLLNIGGNHLQG 270 (746)
Q Consensus 206 l~~~L~~L~l~~N~i~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p---~~~~~l~~L~~L~Ls~N~l~~ 270 (746)
++ +|+.|++++|+|++.. +..+..+++|++|++++|.+.+..+ ..+..+++|++|++++|.+..
T Consensus 94 l~-~L~~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~ 161 (168)
T 2ell_A 94 LP-NLTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQE 161 (168)
T ss_dssp CT-TCCEEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCB
T ss_pred CC-CCCEEeccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhh
Confidence 87 7999999999999642 2789999999999999999986555 478999999999999999873
No 380
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.61 E-value=7.9e-16 Score=142.52 Aligned_cols=129 Identities=17% Similarity=0.194 Sum_probs=112.7
Q ss_pred CCCCcEeeCccCccc-ccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhc
Q 041467 128 ASSLEMIEFSRNQFS-GGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANL 206 (746)
Q Consensus 128 l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 206 (746)
.++|+.|++++|.++ +.+|..+..+++|++|++++|.+++. ..+..+++|++|++++|.+++.+|..+..+
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--------~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l 87 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--------ANLPKLNKLKKLELSDNRVSGGLEVLAEKC 87 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--------TTCCCCTTCCEEECCSSCCCSCTHHHHHHC
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--------hhhhcCCCCCEEECCCCcccchHHHHhhhC
Confidence 468899999999998 77888899999999999999999863 457889999999999999998788888888
Q ss_pred ccccceEEcccCccccc-CCccccCCCCCCeeecccccceecCC---cCCCCCCCCceeeccc
Q 041467 207 SSTIKQIAMGSNRISST-IPHGIRNLVNLNWLTMESSQLIGTIP---PLIGETPNLQLLNIGG 265 (746)
Q Consensus 207 ~~~L~~L~l~~N~i~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p---~~~~~l~~L~~L~Ls~ 265 (746)
+ +|+.|++++|++++. .+..++.+++|++|++++|.+++..+ ..+..+++|+.|++++
T Consensus 88 ~-~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 88 P-NLTHLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp T-TCCEEECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred C-CCCEEECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 7 799999999999873 34789999999999999999987655 4788999999999874
No 381
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.60 E-value=1.5e-15 Score=143.84 Aligned_cols=137 Identities=18% Similarity=0.250 Sum_probs=84.0
Q ss_pred CCCCEEEccccccc-ccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCCCcee
Q 041467 183 SKLERLYFNRNGFE-GVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLL 261 (746)
Q Consensus 183 ~~L~~L~Ls~N~l~-~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 261 (746)
++|+.|++++|.++ +.+|..+..++ +|+.|++++|.+++. ..|..+++|++|+|++|++.+.+|..+..+++|++|
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~-~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFV-NLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGG-GCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCC-CCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 55666666666665 45566556665 566667766666653 556666777777777777666566666666777777
Q ss_pred ecccccccccccccccccChHHhhhccCCCCCCccccCCCCCCeeeecCCcCccccc---hhhhhcccccceEEccCccc
Q 041467 262 NIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLP---QQILSVTTLSLYLELDNNLL 338 (746)
Q Consensus 262 ~Ls~N~l~~~~~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~l~~~L~Ls~N~l 338 (746)
+|++|.+++.. .+..+..+++|+.|++++|++++..+ ..+..++++ ++|++++|.+
T Consensus 101 ~Ls~N~l~~~~--------------------~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L-~~L~l~~n~~ 159 (168)
T 2ell_A 101 NLSGNKLKDIS--------------------TLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQL-TYLDGYDRED 159 (168)
T ss_dssp ECBSSSCCSSG--------------------GGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSC-CEETTEETTS
T ss_pred eccCCccCcch--------------------hHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccC-cEecCCCCCh
Confidence 77776665211 11345566667777777777764322 255666666 4666666666
Q ss_pred cccCch
Q 041467 339 NGSLPP 344 (746)
Q Consensus 339 ~~~~p~ 344 (746)
. .+|.
T Consensus 160 ~-~~~~ 164 (168)
T 2ell_A 160 Q-EAPD 164 (168)
T ss_dssp C-BCCS
T ss_pred h-hccc
Confidence 5 3443
No 382
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.59 E-value=5.6e-15 Score=143.12 Aligned_cols=128 Identities=17% Similarity=0.251 Sum_probs=107.4
Q ss_pred cEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhcccccc
Q 041467 132 EMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIK 211 (746)
Q Consensus 132 ~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~ 211 (746)
+.+++++|+++. +|..+. ++|++|+|++|.|+. +|..|.++++|+.|+|++|.|++..|..|..+. +|+
T Consensus 13 ~~l~~~~~~l~~-ip~~~~--~~l~~L~L~~n~i~~-------ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~-~L~ 81 (193)
T 2wfh_A 13 TVVRCSNKGLKV-LPKGIP--RDVTELYLDGNQFTL-------VPKELSNYKHLTLIDLSNNRISTLSNQSFSNMT-QLL 81 (193)
T ss_dssp TEEECTTSCCSS-CCSCCC--TTCCEEECCSSCCCS-------CCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCT-TCC
T ss_pred CEEEcCCCCCCc-CCCCCC--CCCCEEECCCCcCch-------hHHHhhcccCCCEEECCCCcCCEeCHhHccCCC-CCC
Confidence 567788888874 444332 588899999998874 456788889999999999999877777888887 799
Q ss_pred eEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCCCceeecccccccc
Q 041467 212 QIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQG 270 (746)
Q Consensus 212 ~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 270 (746)
.|+|++|+|++..|..|.++++|++|+|++|++.+..+..|..+++|+.|+|++|.+..
T Consensus 82 ~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 82 TLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp EEECCSSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred EEECCCCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 99999999998888889999999999999999997777789999999999999999874
No 383
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.57 E-value=3.6e-15 Score=138.04 Aligned_cols=70 Identities=21% Similarity=0.162 Sum_probs=58.8
Q ss_pred cccccEEecccCcCc-ccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcC
Q 041467 17 RTFLRYINLVNNGFN-GEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICS 88 (746)
Q Consensus 17 ~~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 88 (746)
.++|+.|++++|.++ +.+|..+..+++|++|+|++|.+++. ..++++++|++|+|++|.+.+.+|..+..
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~ 86 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEK 86 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHH
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhh
Confidence 467999999999997 78888889999999999999999865 77888999999999999887766665443
No 384
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.57 E-value=1.2e-14 Score=140.76 Aligned_cols=129 Identities=22% Similarity=0.262 Sum_probs=99.5
Q ss_pred ccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEccC
Q 041467 20 LRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDC 99 (746)
Q Consensus 20 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 99 (746)
-+++++++|.++ .+|..+. ++|++|+|++|+|+ .+|..|.++++|+.|+|++|.+.+..+..|
T Consensus 12 ~~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f------------- 74 (193)
T 2wfh_A 12 DTVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSF------------- 74 (193)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTT-------------
T ss_pred CCEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHc-------------
Confidence 368999999997 6777654 58999999999998 688899999999999999998866544433
Q ss_pred CCCcCcccCCCCCCEEeccCCCcccccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccc
Q 041467 100 GGRIDSLGHLKSLLLLSLAFNQFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLL 179 (746)
Q Consensus 100 ~~~~~~~~~l~~L~~L~Ls~N~l~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~ 179 (746)
.++++|+.|+|++|+|++..+..|.++++|++|+|++|.|+..+ +..|
T Consensus 75 --------------------------~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~------~~~~ 122 (193)
T 2wfh_A 75 --------------------------SNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLHGNDISVVP------EGAF 122 (193)
T ss_dssp --------------------------TTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCCCBCC------TTTT
T ss_pred --------------------------cCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECCCCCCCeeC------hhhh
Confidence 34456666677777777777778888888888888888887632 2346
Q ss_pred cCCCCCCEEEcccccccc
Q 041467 180 TNCSKLERLYFNRNGFEG 197 (746)
Q Consensus 180 ~~l~~L~~L~Ls~N~l~~ 197 (746)
..+++|+.|+|++|.+..
T Consensus 123 ~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 123 NDLSALSHLAIGANPLYC 140 (193)
T ss_dssp TTCTTCCEEECCSSCEEC
T ss_pred hcCccccEEEeCCCCeec
Confidence 677888888888887764
No 385
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.56 E-value=1.6e-14 Score=137.93 Aligned_cols=133 Identities=16% Similarity=0.175 Sum_probs=102.2
Q ss_pred CcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhccccc
Q 041467 131 LEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTI 210 (746)
Q Consensus 131 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L 210 (746)
.+.+++++|+++.. |..+ .++|+.|++++|.+++.+ +..|..+++|++|++++|++++..+..+..+. +|
T Consensus 9 ~~~l~~~~~~l~~~-p~~~--~~~l~~L~l~~n~l~~~~------~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~-~L 78 (177)
T 2o6r_A 9 GTEIRCNSKGLTSV-PTGI--PSSATRLELESNKLQSLP------HGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLT-KL 78 (177)
T ss_dssp TTEEECCSSCCSSC-CTTC--CTTCSEEECCSSCCCCCC------TTTTTTCTTCSEEECCSSCCCCCCTTTTTTCT-TC
T ss_pred CCEEEecCCCCccC-CCCC--CCCCcEEEeCCCcccEeC------HHHhcCcccccEEECCCCcceEeChhHccCCC-cc
Confidence 45677777777643 3322 367888888888887532 23467778888888888888866566667776 68
Q ss_pred ceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCCCceeeccccccccccc
Q 041467 211 KQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSIL 273 (746)
Q Consensus 211 ~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~ 273 (746)
++|++++|+|++..+..|..+++|++|++++|++.+..+..+..+++|++|+|++|.+.+..+
T Consensus 79 ~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 79 TILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 999999999987777778899999999999999987766677889999999999999986543
No 386
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.55 E-value=2e-13 Score=147.67 Aligned_cols=253 Identities=9% Similarity=0.084 Sum_probs=174.9
Q ss_pred CcccccCccccccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccch
Q 041467 5 NLLQYSKPLCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILT 84 (746)
Q Consensus 5 ~~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~ 84 (746)
++.++....|.. .+|+.++|..| ++.+-..+|.+. +|+.++|.+ .++.+-+..|.++.+|+.+++++|++......
T Consensus 123 ~i~~I~~~aF~~-~~L~~i~l~~~-i~~I~~~aF~~~-~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~ 198 (401)
T 4fdw_A 123 SVKSIPKDAFRN-SQIAKVVLNEG-LKSIGDMAFFNS-TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPAS 198 (401)
T ss_dssp TCCEECTTTTTT-CCCSEEECCTT-CCEECTTTTTTC-CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTT
T ss_pred ccCEehHhhccc-CCccEEEeCCC-ccEECHHhcCCC-CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechh
Confidence 344444445554 46888888776 665666778774 688888885 66656667888888899999888887554444
Q ss_pred hhcCCCCCCEEEccCCCC---cCcccCCCCCCEEeccCCCc----ccccCCCCCcEeeCccCcccccCCccccCCCCCCE
Q 041467 85 EICSLFKLERLRIDCGGR---IDSLGHLKSLLLLSLAFNQF----LSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSW 157 (746)
Q Consensus 85 ~~~~l~~L~~L~l~~~~~---~~~~~~l~~L~~L~Ls~N~l----~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~ 157 (746)
.|. ..+|+.+.+..+-. ..+|.++++|+.+++..|-- ..|.+ .+|+.+.+ .|.++.+...+|.++++|+.
T Consensus 199 aF~-~~~L~~l~lp~~l~~I~~~aF~~~~~L~~l~l~~~l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~ 275 (401)
T 4fdw_A 199 TFV-YAGIEEVLLPVTLKEIGSQAFLKTSQLKTIEIPENVSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAE 275 (401)
T ss_dssp TTT-TCCCSEEECCTTCCEECTTTTTTCTTCCCEECCTTCCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCE
T ss_pred hEe-ecccCEEEeCCchheehhhHhhCCCCCCEEecCCCccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCE
Confidence 555 57888888864311 15677888888888876521 23445 67888888 45577677788888888888
Q ss_pred EEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCee
Q 041467 158 LNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWL 237 (746)
Q Consensus 158 L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L 237 (746)
+++.+|.+...... ......|.+|++|+.++|.+ .++..-...|.++. +|+.+.+..| ++.+-+.+|.++ +|+.+
T Consensus 276 l~l~~~~~~~~~~~-~I~~~aF~~c~~L~~l~l~~-~i~~I~~~aF~~c~-~L~~l~lp~~-l~~I~~~aF~~~-~L~~l 350 (401)
T 4fdw_A 276 VTTYGSTFNDDPEA-MIHPYCLEGCPKLARFEIPE-SIRILGQGLLGGNR-KVTQLTIPAN-VTQINFSAFNNT-GIKEV 350 (401)
T ss_dssp EEEESSCCCCCTTC-EECTTTTTTCTTCCEECCCT-TCCEECTTTTTTCC-SCCEEEECTT-CCEECTTSSSSS-CCCEE
T ss_pred EEeCCccccCCccc-EECHHHhhCCccCCeEEeCC-ceEEEhhhhhcCCC-CccEEEECcc-ccEEcHHhCCCC-CCCEE
Confidence 88888776521111 01235677888888888874 46645556666665 6888888554 665666778888 88888
Q ss_pred ecccccceecCCcCCCCCC-CCceeeccccccc
Q 041467 238 TMESSQLIGTIPPLIGETP-NLQLLNIGGNHLQ 269 (746)
Q Consensus 238 ~L~~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~ 269 (746)
++++|.+....+..|.+++ +++.|++..+.+.
T Consensus 351 ~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~~~~ 383 (401)
T 4fdw_A 351 KVEGTTPPQVFEKVWYGFPDDITVIRVPAESVE 383 (401)
T ss_dssp EECCSSCCBCCCSSCCCSCTTCCEEEECGGGHH
T ss_pred EEcCCCCcccccccccCCCCCccEEEeCHHHHH
Confidence 8888887766667777774 6778877777654
No 387
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.54 E-value=3.2e-14 Score=135.77 Aligned_cols=131 Identities=19% Similarity=0.229 Sum_probs=111.3
Q ss_pred CCEEeccCCCccccc--CCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEE
Q 041467 112 LLLLSLAFNQFLSLS--NASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLY 189 (746)
Q Consensus 112 L~~L~Ls~N~l~~l~--~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~ 189 (746)
.+.+++++|++..++ -.++|+.|++++|++++..+..|..+++|++|+|++|.+++.+ +..|..+++|++|+
T Consensus 9 ~~~l~~~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~------~~~~~~l~~L~~L~ 82 (177)
T 2o6r_A 9 GTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLP------DGVFDKLTKLTILY 82 (177)
T ss_dssp TTEEECCSSCCSSCCTTCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCC------TTTTTTCTTCCEEE
T ss_pred CCEEEecCCCCccCCCCCCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeC------hhHccCCCccCEEE
Confidence 467888888886654 3478999999999999888888999999999999999998633 34578899999999
Q ss_pred cccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCC
Q 041467 190 FNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIP 249 (746)
Q Consensus 190 Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p 249 (746)
|++|++++..+..+..+. +|+.|++++|++++..+..|..+++|++|+|++|.+.+..|
T Consensus 83 l~~N~l~~~~~~~~~~l~-~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 83 LHENKLQSLPNGVFDKLT-QLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CCSSCCCCCCTTTTTTCT-TCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCCCCccccCHHHhhCCc-ccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 999999977777778887 79999999999997666678999999999999999876543
No 388
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.51 E-value=1.9e-14 Score=137.32 Aligned_cols=134 Identities=12% Similarity=0.182 Sum_probs=107.2
Q ss_pred cccCCCCCcEeeCccCcccccCCccccCC-CCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChh
Q 041467 124 SLSNASSLEMIEFSRNQFSGGVSVDFSRL-KNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHS 202 (746)
Q Consensus 124 ~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 202 (746)
.+.++++|+.|++++|+++.. +. +..+ ++|++|+|++|.+++ + ..+..+++|++|++++|.+++..|..
T Consensus 14 ~~~~~~~L~~L~l~~n~l~~i-~~-~~~~~~~L~~L~Ls~N~l~~-------~-~~l~~l~~L~~L~Ls~N~l~~~~~~~ 83 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIPVI-EN-LGATLDQFDAIDFSDNEIRK-------L-DGFPLLRRLKTLLVNNNRICRIGEGL 83 (176)
T ss_dssp EEECTTSCEEEECTTSCCCSC-CC-GGGGTTCCSEEECCSSCCCE-------E-CCCCCCSSCCEEECCSSCCCEECSCH
T ss_pred hcCCcCCceEEEeeCCCCchh-HH-hhhcCCCCCEEECCCCCCCc-------c-cccccCCCCCEEECCCCcccccCcch
Confidence 345677888888888888854 44 4444 489999999999875 2 45788899999999999998665555
Q ss_pred hhhcccccceEEcccCcccccCCc--cccCCCCCCeeecccccceecCCcC----CCCCCCCceeecccccccc
Q 041467 203 IANLSSTIKQIAMGSNRISSTIPH--GIRNLVNLNWLTMESSQLIGTIPPL----IGETPNLQLLNIGGNHLQG 270 (746)
Q Consensus 203 ~~~l~~~L~~L~l~~N~i~~~~p~--~~~~l~~L~~L~L~~N~l~~~~p~~----~~~l~~L~~L~Ls~N~l~~ 270 (746)
+..++ +|++|++++|+|+ .+|. .+..+++|+.|++++|.+. .+|.. +..+++|+.||+++|.+..
T Consensus 84 ~~~l~-~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~~ 154 (176)
T 1a9n_A 84 DQALP-DLTELILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLKE 154 (176)
T ss_dssp HHHCT-TCCEEECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHHH
T ss_pred hhcCC-CCCEEECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHHH
Confidence 67887 7999999999996 4666 7889999999999999997 45664 8899999999999998763
No 389
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.51 E-value=1.6e-15 Score=160.13 Aligned_cols=128 Identities=16% Similarity=0.201 Sum_probs=92.6
Q ss_pred cCCCCCCeEeecCCeeEEE--------EEeehhhhhhh--------------h--------hhHHHHHHHHHhhcCCCCc
Q 041467 480 NNFSPANKIREGGFNIVYN--------VAMKVANLKQK--------------E--------ASRSFAAEFNALRNIRHRN 529 (746)
Q Consensus 480 ~~~~~~~~ig~g~~g~v~~--------vavK~~~~~~~--------------~--------~~~~~~~E~~~l~~l~Hpn 529 (746)
.-|++...||+|++|.||+ ||||+++.... . ......+|.+.|.++.++.
T Consensus 95 ~iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~g 174 (397)
T 4gyi_A 95 DVYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEG 174 (397)
T ss_dssp SCSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CEEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 3488999999999999997 99998643210 0 0112346777777776554
Q ss_pred ee--eEEEEEecCCcccchhhhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCC----
Q 041467 530 LI--KIITICSSIDFEGFDFKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDV---- 603 (746)
Q Consensus 530 Iv--~l~~~~~~~~~~~lv~e~~~~g~l~~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~---- 603 (746)
+. ..+++ ...++||||+.++.+... ........++.|++.|+.|||+. +||||||||.|||+++++
T Consensus 175 v~vp~p~~~----~~~~LVME~i~G~~L~~l-~~~~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NILl~~dgd~~d 246 (397)
T 4gyi_A 175 FPVPEPIAQ----SRHTIVMSLVDALPMRQV-SSVPDPASLYADLIALILRLAKH---GLIHGDFNEFNILIREEKDAED 246 (397)
T ss_dssp CSCCCEEEE----ETTEEEEECCSCEEGGGC-CCCSCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEEEEECSSC
T ss_pred CCCCeeeec----cCceEEEEecCCccHhhh-cccHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeCCCCccc
Confidence 42 22222 234799999988877522 23345567899999999999999 999999999999998776
Q ss_pred ------cEEEcccccccc
Q 041467 604 ------VTHVGDLGLAKF 615 (746)
Q Consensus 604 ------~~ki~DfGla~~ 615 (746)
.+.|+||+=+..
T Consensus 247 ~~~~~~~~~iID~~Q~V~ 264 (397)
T 4gyi_A 247 PSSITLTPIIIXFPQMVS 264 (397)
T ss_dssp TTSEEEEEEECCCTTCEE
T ss_pred ccccccceEEEEeCCccc
Confidence 388999986643
No 390
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.50 E-value=2.4e-14 Score=136.56 Aligned_cols=133 Identities=22% Similarity=0.241 Sum_probs=75.1
Q ss_pred ccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCCC
Q 041467 179 LTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNL 258 (746)
Q Consensus 179 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 258 (746)
+.++++|+.|++++|+++ .+|. +..+.++|+.|++++|+|++. ..|+.+++|++|+|++|++.+..|..|..+++|
T Consensus 15 ~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 90 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 90 (176)
T ss_dssp EECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred cCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCC
Confidence 334455555555555555 2332 333332466666666666643 456666666666666666665444444666666
Q ss_pred ceeecccccccccccccccccChHHhhhccCCCCCCc--cccCCCCCCeeeecCCcCccccchh----hhhcccccceEE
Q 041467 259 QLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPS--SLANCKSLLGLSVSHNKLTSTLPQQ----ILSVTTLSLYLE 332 (746)
Q Consensus 259 ~~L~Ls~N~l~~~~~~~l~~l~~l~~l~n~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~----~~~l~~l~~~L~ 332 (746)
++|+|++|+++ .+|. .+..+++|+.|++++|.++ .+|.. +..++.+ ++||
T Consensus 91 ~~L~L~~N~i~----------------------~~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L-~~Ld 146 (176)
T 1a9n_A 91 TELILTNNSLV----------------------ELGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQV-RVLD 146 (176)
T ss_dssp CEEECCSCCCC----------------------CGGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTC-SEET
T ss_pred CEEECCCCcCC----------------------cchhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCcc-ceeC
Confidence 66666666664 1222 4556666666666666665 45553 5566666 4566
Q ss_pred ccCcccc
Q 041467 333 LDNNLLN 339 (746)
Q Consensus 333 Ls~N~l~ 339 (746)
+++|.+.
T Consensus 147 ~~~n~~~ 153 (176)
T 1a9n_A 147 FQKVKLK 153 (176)
T ss_dssp TEECCHH
T ss_pred CCcCCHH
Confidence 6666554
No 391
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.45 E-value=2.6e-12 Score=138.78 Aligned_cols=190 Identities=14% Similarity=0.114 Sum_probs=87.3
Q ss_pred CCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEccCCC---CcCcccCCCCCCEEe
Q 041467 40 RLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDCGG---RIDSLGHLKSLLLLS 116 (746)
Q Consensus 40 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~---~~~~~~~l~~L~~L~ 116 (746)
.+..++.+.+.+ .++.+-+..|.+. +|+.+.+..| +...-...|.+ .+|+.+.+..+- ...+|.++++|
T Consensus 111 ~~~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~~I~~~aF~~-~~L~~i~lp~~l~~I~~~aF~~c~~L---- 182 (401)
T 4fdw_A 111 ILKGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LKSIGDMAFFN-STVQEIVFPSTLEQLKEDIFYYCYNL---- 182 (401)
T ss_dssp ECSSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CCEECTTTTTT-CCCCEEECCTTCCEECSSTTTTCTTC----
T ss_pred ecCCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-ccEECHHhcCC-CCceEEEeCCCccEehHHHhhCcccC----
Confidence 345666777654 3454445566664 6777777654 43333334444 245555543210 00234444444
Q ss_pred ccCCCcccccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEccccccc
Q 041467 117 LAFNQFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFE 196 (746)
Q Consensus 117 Ls~N~l~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~ 196 (746)
+.++|++|+++.+....|. ..+|+.+.|..+ ++.+ -..+|.+|++|+.+++..| ++
T Consensus 183 ---------------~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I------~~~aF~~~~~L~~l~l~~~-l~ 238 (401)
T 4fdw_A 183 ---------------KKADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEI------GSQAFLKTSQLKTIEIPEN-VS 238 (401)
T ss_dssp ---------------CEEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEE------CTTTTTTCTTCCCEECCTT-CC
T ss_pred ---------------CeeecCCCcceEechhhEe-ecccCEEEeCCc-hhee------hhhHhhCCCCCCEEecCCC-cc
Confidence 4444444444444444443 344555555422 3221 1123444555555555443 33
Q ss_pred ccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccce-----ecCCcCCCCCCCCceeecc
Q 041467 197 GVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLI-----GTIPPLIGETPNLQLLNIG 264 (746)
Q Consensus 197 ~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~-----~~~p~~~~~l~~L~~L~Ls 264 (746)
..-...|.+ + .|+.+.+ .|.++.+-+.+|.++.+|+.+++.+|.+. ...+..|.++++|+.++|.
T Consensus 239 ~I~~~aF~~-~-~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~ 308 (401)
T 4fdw_A 239 TIGQEAFRE-S-GITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP 308 (401)
T ss_dssp EECTTTTTT-C-CCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC
T ss_pred Ccccccccc-C-CccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC
Confidence 222333333 2 3555555 23344333445555555555555544433 2334455555555555554
No 392
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.45 E-value=9.9e-16 Score=149.27 Aligned_cols=135 Identities=24% Similarity=0.303 Sum_probs=82.8
Q ss_pred ccCCCCCcEeeCccCcccccCCc------cccCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEccccccccc
Q 041467 125 LSNASSLEMIEFSRNQFSGGVSV------DFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGV 198 (746)
Q Consensus 125 l~~l~~L~~L~Ls~N~l~~~~~~------~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~ 198 (746)
+.....++.++++.|.+++..|. .|..+++|++|+|++|.+++ +| .+..+++|+.|++++|.++ .
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-------l~-~~~~l~~L~~L~l~~n~l~-~ 84 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-------IS-SLSGMENLRILSLGRNLIK-K 84 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-------CC-CHHHHTTCCEEEEEEEEEC-S
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-------cc-ccccCCCCCEEECCCCCcc-c
Confidence 34456677777777777776665 66666777777777776654 22 4555666777777777666 4
Q ss_pred CChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCC-cCCCCCCCCceeeccccccccc
Q 041467 199 LPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIP-PLIGETPNLQLLNIGGNHLQGS 271 (746)
Q Consensus 199 ~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~ 271 (746)
+|..+..++ +|+.|++++|++++ +| .+..+++|++|++++|++.+..+ ..+..+++|++|++++|.+++.
T Consensus 85 l~~~~~~~~-~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~ 155 (198)
T 1ds9_A 85 IENLDAVAD-TLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYND 155 (198)
T ss_dssp CSSHHHHHH-HCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHH
T ss_pred ccchhhcCC-cCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccc
Confidence 565555554 56666666666664 33 45566666666666666653221 2455566666666666665543
No 393
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.44 E-value=1.5e-15 Score=147.88 Aligned_cols=114 Identities=17% Similarity=0.173 Sum_probs=56.2
Q ss_pred cCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCcccc
Q 041467 150 SRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIR 229 (746)
Q Consensus 150 ~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~ 229 (746)
.....++.++++.|.+.+..+.-..+|..+..+++|++|+|++|.+++ +| .+..+. +|+.|++++|+++ .+|..+.
T Consensus 15 ~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~-~L~~L~l~~n~l~-~l~~~~~ 90 (198)
T 1ds9_A 15 EERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGME-NLRILSLGRNLIK-KIENLDA 90 (198)
T ss_dssp HHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHT-TCCEEEEEEEEEC-SCSSHHH
T ss_pred HhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCC-CCCEEECCCCCcc-cccchhh
Confidence 344555555565555554322222233345555555555555555553 44 455554 4555555555555 3444444
Q ss_pred CCCCCCeeecccccceecCCcCCCCCCCCceeeccccccc
Q 041467 230 NLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQ 269 (746)
Q Consensus 230 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 269 (746)
.+++|++|++++|++.+ +| .+..+++|++|++++|+++
T Consensus 91 ~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~ 128 (198)
T 1ds9_A 91 VADTLEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKIT 128 (198)
T ss_dssp HHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECC
T ss_pred cCCcCCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCC
Confidence 44555555555555543 22 3444455555555555444
No 394
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.41 E-value=7e-12 Score=135.83 Aligned_cols=130 Identities=13% Similarity=0.144 Sum_probs=67.2
Q ss_pred ccccCCCCCCeeecccccceecCCcCCCCCCCCceeecccccccccccccccccChHHhhhccCCCCCCccccCCCCCCe
Q 041467 226 HGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLG 305 (746)
Q Consensus 226 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~ 305 (746)
..|.++..|+.+.+..+.. ......|..+..++.+....+.+.........+|+.+.+. +++...-..+|.+|.+|+.
T Consensus 247 ~~f~~~~~l~~~~~~~~~~-~i~~~~F~~~~~l~~~~~~~~~i~~~~F~~~~~L~~i~l~-~~i~~I~~~aF~~c~~L~~ 324 (394)
T 4fs7_A 247 SVFYGCTDLESISIQNNKL-RIGGSLFYNCSGLKKVIYGSVIVPEKTFYGCSSLTEVKLL-DSVKFIGEEAFESCTSLVS 324 (394)
T ss_dssp STTTTCSSCCEEEECCTTC-EECSCTTTTCTTCCEEEECSSEECTTTTTTCTTCCEEEEC-TTCCEECTTTTTTCTTCCE
T ss_pred ccccccccceeEEcCCCcc-eeeccccccccccceeccCceeeccccccccccccccccc-cccceechhhhcCCCCCCE
Confidence 3444445555555443322 2333444444555554444443332222222222222221 2233333456777888888
Q ss_pred eeecCCcCccccchhhhhcccccceEEccCccccccCchhhhcccCCceeecCCC
Q 041467 306 LSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNLKNLLRLHIPEY 360 (746)
Q Consensus 306 L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~lp~~ 360 (746)
+++..+ ++..-...|.++.+| +.+++..| ++..-...|.++.+|+.+.+|..
T Consensus 325 i~lp~~-v~~I~~~aF~~c~~L-~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 325 IDLPYL-VEEIGKRSFRGCTSL-SNINFPLS-LRKIGANAFQGCINLKKVELPKR 376 (394)
T ss_dssp ECCCTT-CCEECTTTTTTCTTC-CEECCCTT-CCEECTTTBTTCTTCCEEEEEGG
T ss_pred EEeCCc-ccEEhHHhccCCCCC-CEEEECcc-ccEehHHHhhCCCCCCEEEECCC
Confidence 888644 553334556667777 56777666 55444566777777777777654
No 395
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.39 E-value=1e-12 Score=124.26 Aligned_cols=107 Identities=19% Similarity=0.195 Sum_probs=72.4
Q ss_pred cccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEcc
Q 041467 19 FLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRID 98 (746)
Q Consensus 19 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 98 (746)
..+.|++++|.++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|++.+..+..|
T Consensus 10 ~~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f------------ 74 (170)
T 3g39_A 10 SGTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVF------------ 74 (170)
T ss_dssp ETTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTT------------
T ss_pred CCCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhc------------
Confidence 3568888888887 5776553 778888888888887777778888888888888777754333222
Q ss_pred CCCCcCcccCCCCCCEEeccCCCcccccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCC
Q 041467 99 CGGRIDSLGHLKSLLLLSLAFNQFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGS 167 (746)
Q Consensus 99 ~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 167 (746)
.++++|++|+|++|+|++..+..|..+++|++|+|++|.+..
T Consensus 75 ---------------------------~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 116 (170)
T 3g39_A 75 ---------------------------DKLTQLTQLSLNDNQLKSIPRGAFDNLKSLTHIWLLNNPWDC 116 (170)
T ss_dssp ---------------------------TTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCT
T ss_pred ---------------------------cCCCCCCEEECCCCccCEeCHHHhcCCCCCCEEEeCCCCCCC
Confidence 234455555666666666555566666666666666666654
No 396
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.39 E-value=5.8e-12 Score=136.45 Aligned_cols=60 Identities=15% Similarity=0.203 Sum_probs=26.3
Q ss_pred cccCCCCCCeeeecCCcCccccchhhhhcccccceEEccCccccccCchhhhcccCCceeecC
Q 041467 296 SLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSLPPEVGNLKNLLRLHIP 358 (746)
Q Consensus 296 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~p~~~~~l~~L~~L~lp 358 (746)
.|..+.+|+.+.+..+ ++..-...|.++.+| +.+++.++ ++..-...|.++++|+.+.+|
T Consensus 292 ~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L-~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp 351 (394)
T 4fs7_A 292 TFYGCSSLTEVKLLDS-VKFIGEEAFESCTSL-VSIDLPYL-VEEIGKRSFRGCTSLSNINFP 351 (394)
T ss_dssp TTTTCTTCCEEEECTT-CCEECTTTTTTCTTC-CEECCCTT-CCEECTTTTTTCTTCCEECCC
T ss_pred cccccccccccccccc-cceechhhhcCCCCC-CEEEeCCc-ccEEhHHhccCCCCCCEEEEC
Confidence 3445555555555433 332222333444444 34555432 332223445555555555444
No 397
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.38 E-value=1.3e-12 Score=123.57 Aligned_cols=107 Identities=14% Similarity=0.159 Sum_probs=80.9
Q ss_pred CCEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCC
Q 041467 155 LSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNL 234 (746)
Q Consensus 155 L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L 234 (746)
.+.+++++|.++.++ ..+ .++|+.|+|++|+|++..|..|..+. +|++|+|++|+|++..+..|.++++|
T Consensus 11 ~~~l~~s~n~l~~ip-------~~~--~~~l~~L~L~~N~i~~~~~~~~~~l~-~L~~L~Ls~N~l~~l~~~~f~~l~~L 80 (170)
T 3g39_A 11 GTTVDCSGKSLASVP-------TGI--PTTTQVLYLYDNQITKLEPGVFDRLT-QLTRLDLDNNQLTVLPAGVFDKLTQL 80 (170)
T ss_dssp TTEEECTTSCCSSCC-------SCC--CTTCSEEECCSSCCCCCCTTTTTTCT-TCSEEECCSSCCCCCCTTTTTTCTTC
T ss_pred CCEEEeCCCCcCccC-------ccC--CCCCcEEEcCCCcCCccChhhhcCcc-cCCEEECCCCCcCccChhhccCCCCC
Confidence 356666666665422 222 25677777777777776677777776 68888888888887666678888899
Q ss_pred CeeecccccceecCCcCCCCCCCCceeeccccccccc
Q 041467 235 NWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQGS 271 (746)
Q Consensus 235 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 271 (746)
++|+|++|++.+..+..|..+++|++|+|++|.+...
T Consensus 81 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 117 (170)
T 3g39_A 81 TQLSLNDNQLKSIPRGAFDNLKSLTHIWLLNNPWDCA 117 (170)
T ss_dssp CEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCBCTT
T ss_pred CEEECCCCccCEeCHHHhcCCCCCCEEEeCCCCCCCC
Confidence 9999999998877777788899999999999988743
No 398
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.37 E-value=1.8e-12 Score=123.09 Aligned_cols=106 Identities=23% Similarity=0.242 Sum_probs=72.2
Q ss_pred ccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEccC
Q 041467 20 LRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDC 99 (746)
Q Consensus 20 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 99 (746)
-+.+++++|+++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|++.+..+..
T Consensus 14 ~~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~-------------- 76 (174)
T 2r9u_A 14 QTLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGV-------------- 76 (174)
T ss_dssp SSEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTT--------------
T ss_pred CcEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhH--------------
Confidence 468888888886 6777664 78888888888888777778888888888888888775432221
Q ss_pred CCCcCcccCCCCCCEEeccCCCcccccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCC
Q 041467 100 GGRIDSLGHLKSLLLLSLAFNQFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGS 167 (746)
Q Consensus 100 ~~~~~~~~~l~~L~~L~Ls~N~l~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 167 (746)
|.++++|+.|+|++|+|++..+..|..+++|++|+|++|.+..
T Consensus 77 -------------------------~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 77 -------------------------FDKLTQLTQLDLNDNHLKSIPRGAFDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp -------------------------TTTCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCBCT
T ss_pred -------------------------hCCcchhhEEECCCCccceeCHHHhccccCCCEEEeCCCCccc
Confidence 1234455555566666665555556666666666666666654
No 399
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.35 E-value=2.3e-12 Score=122.31 Aligned_cols=105 Identities=17% Similarity=0.209 Sum_probs=80.4
Q ss_pred CEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCC
Q 041467 156 SWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLN 235 (746)
Q Consensus 156 ~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~ 235 (746)
+.+++++|.++.+ |..+. ++|+.|+|++|+|++..|..|..+. +|+.|+|++|+|++..+..|.++++|+
T Consensus 15 ~~l~~~~n~l~~i-------P~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~-~L~~L~Ls~N~l~~i~~~~~~~l~~L~ 84 (174)
T 2r9u_A 15 TLVNCQNIRLASV-------PAGIP--TDKQRLWLNNNQITKLEPGVFDHLV-NLQQLYFNSNKLTAIPTGVFDKLTQLT 84 (174)
T ss_dssp SEEECCSSCCSSC-------CSCCC--TTCSEEECCSSCCCCCCTTTTTTCT-TCCEEECCSSCCCCCCTTTTTTCTTCC
T ss_pred cEEEeCCCCCCcc-------CCCcC--CCCcEEEeCCCCccccCHHHhcCCc-CCCEEECCCCCCCccChhHhCCcchhh
Confidence 5667777766542 22222 6777788888888777777777776 688888888888876566678889999
Q ss_pred eeecccccceecCCcCCCCCCCCceeecccccccc
Q 041467 236 WLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQG 270 (746)
Q Consensus 236 ~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 270 (746)
+|+|++|++.+..+..|..+++|++|+|++|.+..
T Consensus 85 ~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 85 QLDLNDNHLKSIPRGAFDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCSEEECCSSCBCT
T ss_pred EEECCCCccceeCHHHhccccCCCEEEeCCCCccc
Confidence 99999999987666678899999999999998874
No 400
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.30 E-value=1.1e-13 Score=148.09 Aligned_cols=61 Identities=20% Similarity=0.116 Sum_probs=27.7
Q ss_pred ccccEEecccCcCcccCchhhhCC-----ccCcEEecccCcCCccCCccc-cCCCCCCeeeCcCCCC
Q 041467 18 TFLRYINLVNNGFNGEIPHQIGRL-----ISLERLILSNNSFSCAIPANL-SSGSNLIKLSTDSNNL 78 (746)
Q Consensus 18 ~~L~~L~Ls~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~L~~N~l 78 (746)
+.|++|+|++|.|+......+..+ ++|++|+|++|.|+..-...+ ..+++|+.|+|++|.+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l 138 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSL 138 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCC
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCC
Confidence 345555555555543333333222 455555555555543222222 1234455555555544
No 401
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.19 E-value=9.6e-13 Score=140.83 Aligned_cols=146 Identities=13% Similarity=0.134 Sum_probs=79.6
Q ss_pred CCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccc-----cCCCCCCeeeccccccee----cCCcCCC
Q 041467 183 SKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGI-----RNLVNLNWLTMESSQLIG----TIPPLIG 253 (746)
Q Consensus 183 ~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~-----~~l~~L~~L~L~~N~l~~----~~p~~~~ 253 (746)
++|+.|+|++|.++......+.....+|+.|+|++|+|+......+ ...++|++|+|++|.++. .++..+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 4566666666665433222222211246666666666653322222 234567777777777653 2333345
Q ss_pred CCCCCceeecccccccccccccccccChHHhhhccCCCCCCccccCCCCCCeeeecCCcCccc----cchhhhhcccccc
Q 041467 254 ETPNLQLLNIGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTST----LPQQILSVTTLSL 329 (746)
Q Consensus 254 ~l~~L~~L~Ls~N~l~~~~~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~l~~ 329 (746)
.+++|++|+|++|.|+..... .++..+..+++|++|+|++|.|+.. ++..+...+.| +
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~-----------------~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L-~ 242 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLE-----------------LLAAQLDRNRQLQELNVAYNGAGDTAALALARAAREHPSL-E 242 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHH-----------------HHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHHCSSC-C
T ss_pred cCCCcCEEeCCCCCCCcHHHH-----------------HHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHhCCCC-C
Confidence 667777777777777632111 1233445566788888888887642 33334445666 5
Q ss_pred eEEccCccccccCchhh
Q 041467 330 YLELDNNLLNGSLPPEV 346 (746)
Q Consensus 330 ~L~Ls~N~l~~~~p~~~ 346 (746)
.|+|++|.|+..-...+
T Consensus 243 ~L~Ls~N~i~~~g~~~L 259 (372)
T 3un9_A 243 LLHLYFNELSSEGRQVL 259 (372)
T ss_dssp EEECTTSSCCHHHHHHH
T ss_pred EEeccCCCCCHHHHHHH
Confidence 67777777764433333
No 402
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.17 E-value=6e-11 Score=126.07 Aligned_cols=105 Identities=16% Similarity=0.106 Sum_probs=68.9
Q ss_pred cEEecccC-cCcccCchhhhCCccCcEEeccc-CcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEcc
Q 041467 21 RYINLVNN-GFNGEIPHQIGRLISLERLILSN-NSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRID 98 (746)
Q Consensus 21 ~~L~Ls~N-~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 98 (746)
..++++++ +|+ .+|. |..+++|++|+|++ |+|++..|..|+++++|+.|+|++|++.+..|..|.
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~----------- 77 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFH----------- 77 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGG-----------
T ss_pred CEEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhc-----------
Confidence 35688887 787 5777 88888888888885 888876667787787787777777777655444332
Q ss_pred CCCCcCcccCCCCCCEEeccCCCcccccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCC
Q 041467 99 CGGRIDSLGHLKSLLLLSLAFNQFLSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGS 167 (746)
Q Consensus 99 ~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 167 (746)
++++|+.|+|++|+|++.++..|..++ |+.|+|++|.+..
T Consensus 78 ----------------------------~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 78 ----------------------------FTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp ----------------------------SCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred ----------------------------CCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCccC
Confidence 334445555555666655555555444 6666666666543
No 403
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.15 E-value=2.9e-11 Score=123.15 Aligned_cols=140 Identities=15% Similarity=0.099 Sum_probs=108.8
Q ss_pred hhhhcCCCCCCeEeecCCeeEEE-------EEeehhhhhhhhhhHHHHHHHHHhhcCC-CCceeeEEEEEecCCcccchh
Q 041467 476 SKATNNFSPANKIREGGFNIVYN-------VAMKVANLKQKEASRSFAAEFNALRNIR-HRNLIKIITICSSIDFEGFDF 547 (746)
Q Consensus 476 ~~~~~~~~~~~~ig~g~~g~v~~-------vavK~~~~~~~~~~~~~~~E~~~l~~l~-HpnIv~l~~~~~~~~~~~lv~ 547 (746)
......|+.....+.|+.+.||+ +++|+...........+.+|+++++.+. |..+.++++++...+..|+||
T Consensus 10 ~~~l~~~~~~~~~~g~s~~~v~~~~~~~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~ 89 (263)
T 3tm0_A 10 KKLIEKYRCVKDTEGMSPAKVYKLVGENENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLM 89 (263)
T ss_dssp HHHHTTSEEEECCSCCSSSEEEEEECSSCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEE
T ss_pred HHHhccceeEeeccCCCCCeEEEEECCCCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEE
Confidence 34456787777888888899997 7888876432233346899999999985 677889999998888899999
Q ss_pred hhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhcC--------------------------------------------
Q 041467 548 KAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHC-------------------------------------------- 583 (746)
Q Consensus 548 e~~~~g~l~~~~l~~~~~~~i~~~i~~~l~yLH~~~-------------------------------------------- 583 (746)
|++++.++.....+..+...++.+++++++.||+..
T Consensus 90 e~i~G~~l~~~~~~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (263)
T 3tm0_A 90 SEADGVLCSEEYEDEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRE 169 (263)
T ss_dssp ECCSSEEHHHHCCTTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSHHH
T ss_pred EecCCeehhhccCCcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCHHH
Confidence 999988876432233455688999999999999810
Q ss_pred ------------CCCeEEcCCCCCCeeeCCCCcEEEcccccccc
Q 041467 584 ------------QPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615 (746)
Q Consensus 584 ------------~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~ 615 (746)
.+.++|+|++|.||++++++.+.|+||+.+..
T Consensus 170 l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T 3tm0_A 170 LYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp HHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence 13599999999999998765667999998754
No 404
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.14 E-value=7.3e-11 Score=125.42 Aligned_cols=89 Identities=17% Similarity=0.252 Sum_probs=53.6
Q ss_pred ccCCCCCCEEEccc-ccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCC
Q 041467 179 LTNCSKLERLYFNR-NGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPN 257 (746)
Q Consensus 179 ~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 257 (746)
+..+++|+.|+|++ |.|++..|..|..+. +|+.|+|++|+|++..|..|.+|++|++|+|++|+|.+..+..|..++
T Consensus 27 l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~-~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~- 104 (347)
T 2ifg_A 27 LPGAENLTELYIENQQHLQHLELRDLRGLG-ELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLS- 104 (347)
T ss_dssp SCSCSCCSEEECCSCSSCCEECGGGSCSCC-CCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCSCC-
T ss_pred CCCCCCeeEEEccCCCCCCCcChhHhcccc-CCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCccceeCHHHcccCC-
Confidence 44445555555553 555544445555554 466666666666665566666666666666666666655444555454
Q ss_pred Cceeeccccccc
Q 041467 258 LQLLNIGGNHLQ 269 (746)
Q Consensus 258 L~~L~Ls~N~l~ 269 (746)
|+.|+|++|.+.
T Consensus 105 L~~l~l~~N~~~ 116 (347)
T 2ifg_A 105 LQELVLSGNPLH 116 (347)
T ss_dssp CCEEECCSSCCC
T ss_pred ceEEEeeCCCcc
Confidence 777777777766
No 405
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.03 E-value=4.9e-08 Score=105.39 Aligned_cols=143 Identities=13% Similarity=0.050 Sum_probs=81.6
Q ss_pred ccccEEecccCcCcccCchhhhCCccCcEEecccCc---CCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCE
Q 041467 18 TFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNS---FSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLER 94 (746)
Q Consensus 18 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~---l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~ 94 (746)
..|+.+.+..+ ++.+-..+|.++++|+.+.++.|. ++.+-...|.++.+|+.+.+..+ +...-...|..+.+|+.
T Consensus 64 ~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c~~L~~ 141 (394)
T 4gt6_A 64 YVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHHCEELDT 141 (394)
T ss_dssp SCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTTCTTCCE
T ss_pred CcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhhhccccc
Confidence 34777777654 555666778888888888887664 54334456777777777776543 33333445666677777
Q ss_pred EEccCCCC---cCcccCCCCCCEEeccCCCc----ccccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCC
Q 041467 95 LRIDCGGR---IDSLGHLKSLLLLSLAFNQF----LSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNN 164 (746)
Q Consensus 95 L~l~~~~~---~~~~~~l~~L~~L~Ls~N~l----~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~ 164 (746)
+.+..+-. ...|.++.+|+.+.+..+-- ..|. ..+|+.+.+..+- +......|.++.+|.......+.
T Consensus 142 i~lp~~~~~I~~~~F~~c~~L~~i~~~~~~~~I~~~aF~-~~~l~~i~ip~~~-~~i~~~af~~c~~l~~~~~~~~~ 216 (394)
T 4gt6_A 142 VTIPEGVTSVADGMFSYCYSLHTVTLPDSVTAIEERAFT-GTALTQIHIPAKV-TRIGTNAFSECFALSTITSDSES 216 (394)
T ss_dssp EECCTTCCEECTTTTTTCTTCCEEECCTTCCEECTTTTT-TCCCSEEEECTTC-CEECTTTTTTCTTCCEEEECCSS
T ss_pred ccccceeeeecccceecccccccccccceeeEecccccc-ccceeEEEECCcc-cccccchhhhccccceecccccc
Confidence 76643211 13455666666666654421 1222 2455666554432 22444556666666665554443
No 406
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.98 E-value=5.8e-08 Score=104.84 Aligned_cols=219 Identities=11% Similarity=0.079 Sum_probs=123.5
Q ss_pred cCchhhhCCc-cCcEEecccCcCCccCCccccCCCCCCeeeCcCCC---CCCccchhhcCCCCCCEEEccCCC-C--cCc
Q 041467 33 EIPHQIGRLI-SLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNN---LVRDILTEICSLFKLERLRIDCGG-R--IDS 105 (746)
Q Consensus 33 ~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~---l~~~~~~~~~~l~~L~~L~l~~~~-~--~~~ 105 (746)
+-..+|.++. .|+.+.+..+ ++.+-..+|.++.+|+.+.+..|. +...-...|..+.+|+.+.+..+- . ..+
T Consensus 54 Ig~~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~~~~I~~~a 132 (394)
T 4gt6_A 54 IGDRVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDSVTEIDSEA 132 (394)
T ss_dssp ECTTTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTTCSEECTTT
T ss_pred cCHhhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCccceehhhh
Confidence 3345677774 5999999754 665667789999999999987764 333334567777777777664321 1 145
Q ss_pred ccCCCCCCEEeccCCCc----ccccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCCccccccccC
Q 041467 106 LGHLKSLLLLSLAFNQF----LSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTN 181 (746)
Q Consensus 106 ~~~l~~L~~L~Ls~N~l----~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~ 181 (746)
|.++.+|+.+.+..+.- ..|.++.+|+.+.+..+ ++.+...+|.. .+|+.+.+..+-.. .....|.+
T Consensus 133 F~~c~~L~~i~lp~~~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~~-~~l~~i~ip~~~~~-------i~~~af~~ 203 (394)
T 4gt6_A 133 FHHCEELDTVTIPEGVTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFTG-TALTQIHIPAKVTR-------IGTNAFSE 203 (394)
T ss_dssp TTTCTTCCEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTT-CCCSEEEECTTCCE-------ECTTTTTT
T ss_pred hhhhcccccccccceeeeecccceecccccccccccce-eeEeccccccc-cceeEEEECCcccc-------cccchhhh
Confidence 67777888887765433 24566777777777654 44455556654 56777777554321 12234666
Q ss_pred CCCCCEEEcccccccccCChhhhhcc-------------cccceEEcccCcccccCCccccCCCCCCeeecccccceecC
Q 041467 182 CSKLERLYFNRNGFEGVLPHSIANLS-------------STIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTI 248 (746)
Q Consensus 182 l~~L~~L~Ls~N~l~~~~p~~~~~l~-------------~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~ 248 (746)
+.+++......+... .+...+..-. ..+..+.+. +.++.+-..+|.++.+|+.+.+.++.. ..-
T Consensus 204 c~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip-~~v~~i~~~aF~~c~~L~~i~lp~~~~-~I~ 280 (394)
T 4gt6_A 204 CFALSTITSDSESYP-AIDNVLYEKSANGDYALIRYPSQREDPAFKIP-NGVARIETHAFDSCAYLASVKMPDSVV-SIG 280 (394)
T ss_dssp CTTCCEEEECCSSSC-BSSSCEEEECTTSCEEEEECCTTCCCSEEECC-TTEEEECTTTTTTCSSCCEEECCTTCC-EEC
T ss_pred ccccceecccccccc-cccceeecccccccccccccccccccceEEcC-CcceEcccceeeecccccEEecccccc-eec
Confidence 777777666554432 1111111100 011122221 122223334566666666666644332 244
Q ss_pred CcCCCCCCCCceeecc
Q 041467 249 PPLIGETPNLQLLNIG 264 (746)
Q Consensus 249 p~~~~~l~~L~~L~Ls 264 (746)
...|.++++|+.+.+.
T Consensus 281 ~~aF~~c~~L~~i~l~ 296 (394)
T 4gt6_A 281 TGAFMNCPALQDIEFS 296 (394)
T ss_dssp TTTTTTCTTCCEEECC
T ss_pred CcccccccccccccCC
Confidence 4556666666666654
No 407
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=98.95 E-value=3.1e-10 Score=115.11 Aligned_cols=131 Identities=13% Similarity=0.065 Sum_probs=95.3
Q ss_pred hhcCCCCCCeEe-ecCCeeEEE--------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCc--eeeEEEEEecCCcccch
Q 041467 478 ATNNFSPANKIR-EGGFNIVYN--------VAMKVANLKQKEASRSFAAEFNALRNIRHRN--LIKIITICSSIDFEGFD 546 (746)
Q Consensus 478 ~~~~~~~~~~ig-~g~~g~v~~--------vavK~~~~~~~~~~~~~~~E~~~l~~l~Hpn--Iv~l~~~~~~~~~~~lv 546 (746)
....|.. ..++ .|..+.||+ +++|+.... ....+.+|+++++.+.+.+ +.++++++...+..++|
T Consensus 18 ~~~~~~~-~~~~~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v 93 (264)
T 1nd4_A 18 RLFGYDW-AQQTIGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLL 93 (264)
T ss_dssp TTTTCEE-EECSCTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEE
T ss_pred hcCCCce-EecccCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEE
Confidence 3344443 3344 455689997 677775422 2345789999999997544 55688888887788999
Q ss_pred hhhccCCcccccCCCHHHHHHHHHHHHHHHHHHHhcC-------------------------------------------
Q 041467 547 FKAISNGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHC------------------------------------------- 583 (746)
Q Consensus 547 ~e~~~~g~l~~~~l~~~~~~~i~~~i~~~l~yLH~~~------------------------------------------- 583 (746)
|||+++..+. .+......++.++++.++.||+..
T Consensus 94 ~e~i~G~~l~---~~~~~~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (264)
T 1nd4_A 94 LGEVPGQDLL---SSHLAPAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAEL 170 (264)
T ss_dssp EECCSSEETT---TSCCCHHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHH
T ss_pred EEecCCcccC---cCcCCHhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHH
Confidence 9999988774 222234478889999999999752
Q ss_pred ------------CCCeEEcCCCCCCeeeCCCCcEEEcccccccc
Q 041467 584 ------------QPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615 (746)
Q Consensus 584 ------------~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~ 615 (746)
.+.++|+|++|.||++++++.++|+|||.|..
T Consensus 171 ~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~ 214 (264)
T 1nd4_A 171 FARLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGV 214 (264)
T ss_dssp HHHHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhccc
Confidence 11399999999999998776677999999864
No 408
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.85 E-value=5.3e-09 Score=111.52 Aligned_cols=132 Identities=17% Similarity=0.258 Sum_probs=100.9
Q ss_pred CCCeEeecCCeeEEE-------EEeehhh--hhh-hhhhHHHHHHHHHhhcCC--CCceeeEEEEEecC---Ccccchhh
Q 041467 484 PANKIREGGFNIVYN-------VAMKVAN--LKQ-KEASRSFAAEFNALRNIR--HRNLIKIITICSSI---DFEGFDFK 548 (746)
Q Consensus 484 ~~~~ig~g~~g~v~~-------vavK~~~--~~~-~~~~~~~~~E~~~l~~l~--HpnIv~l~~~~~~~---~~~~lv~e 548 (746)
..+.++.|.++.||+ +++|+.. ... ......+.+|+++++.+. +..++++++++.+. +..++|||
T Consensus 42 ~~~~l~~G~sn~~y~v~~~~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme 121 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTPGQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIME 121 (359)
T ss_dssp EEEECCC-CCSCEEEEECSSCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEE
T ss_pred eEEEcCCcccceEEEEEECCceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEE
Confidence 456788999999997 6777764 322 122346889999999997 45688899988776 45789999
Q ss_pred hccCCccc---ccCCCHHHHHHHHHHHHHHHHHHHhcC------------------------------------------
Q 041467 549 AISNGQLR---LCNLSLTQRVNIAIDVAFAIEYLRHHC------------------------------------------ 583 (746)
Q Consensus 549 ~~~~g~l~---~~~l~~~~~~~i~~~i~~~l~yLH~~~------------------------------------------ 583 (746)
|+++..+. ...++..++..++.+++++|+.||+..
T Consensus 122 ~v~G~~l~~~~~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (359)
T 3dxp_A 122 FVSGRVLWDQSLPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAMDSLM 201 (359)
T ss_dssp CCCCBCCCCTTCTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHHHHHH
T ss_pred ecCCeecCCCccccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHHHHHH
Confidence 99988774 335678899999999999999999831
Q ss_pred -------------CCCeEEcCCCCCCeeeCCCCc--EEEcccccccc
Q 041467 584 -------------QPSIVHGDLKPSNILLDQDVV--THVGDLGLAKF 615 (746)
Q Consensus 584 -------------~~~ivHrDlkp~NILl~~~~~--~ki~DfGla~~ 615 (746)
.+.++|+|++|.||+++.++. +.|.||+.+..
T Consensus 202 ~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 202 DWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 247999999999999987653 68999999864
No 409
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.80 E-value=2.6e-09 Score=113.26 Aligned_cols=84 Identities=19% Similarity=0.292 Sum_probs=47.3
Q ss_pred CCCCCCEEEccCCCCCCCCCCCccccccc---cCCCCCCEEEccccccccc----CChhhhhcccccceEEcccCccccc
Q 041467 151 RLKNLSWLNLGVNNLGSGTANELDFINLL---TNCSKLERLYFNRNGFEGV----LPHSIANLSSTIKQIAMGSNRISST 223 (746)
Q Consensus 151 ~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~---~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~~L~~L~l~~N~i~~~ 223 (746)
.+++|++|+|++|.+.. ..+..+ ..+++|++|+|+.|.+.+. ++..+..++ +|+.|++++|.|+..
T Consensus 250 ~~p~Lr~L~L~~~~i~~------~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~-~L~~L~L~~n~i~d~ 322 (362)
T 2ra8_A 250 RFPNLKWLGIVDAEEQN------VVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIK-HLKFINMKYNYLSDE 322 (362)
T ss_dssp TCTTCCEEEEESCTTHH------HHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHT-TCSEEECCSBBCCHH
T ss_pred CCCCcCEEeCCCCCCch------HHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCC-cceEEECCCCcCCHH
Confidence 35677777777776643 111111 2456777777777777643 233334455 577777777776643
Q ss_pred CCccccC-CCCCCeeeccccc
Q 041467 224 IPHGIRN-LVNLNWLTMESSQ 243 (746)
Q Consensus 224 ~p~~~~~-l~~L~~L~L~~N~ 243 (746)
.-..+.. + ...++++.++
T Consensus 323 ~~~~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 323 MKKELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp HHHHHHHHC--CSEEECCSBC
T ss_pred HHHHHHHHc--CCEEEecCCc
Confidence 2222332 2 3556777665
No 410
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.75 E-value=9.5e-09 Score=108.88 Aligned_cols=89 Identities=11% Similarity=0.132 Sum_probs=58.2
Q ss_pred CCCCCcEeeCccCcccccCCccc---cCCCCCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhh
Q 041467 127 NASSLEMIEFSRNQFSGGVSVDF---SRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSI 203 (746)
Q Consensus 127 ~l~~L~~L~Ls~N~l~~~~~~~~---~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 203 (746)
.+++|+.|+|++|.+....+..+ ..+++|++|+|+.|.++..... .++..+..+++|+.|+|++|.++...-..+
T Consensus 250 ~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~--~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l 327 (362)
T 2ra8_A 250 RFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGAR--LLLDHVDKIKHLKFINMKYNYLSDEMKKEL 327 (362)
T ss_dssp TCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHH--HHHTTHHHHTTCSEEECCSBBCCHHHHHHH
T ss_pred CCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHH--HHHhhcccCCcceEEECCCCcCCHHHHHHH
Confidence 46788888888888874333233 2578899999999988641100 123334567899999999998874433333
Q ss_pred hhcccccceEEcccCc
Q 041467 204 ANLSSTIKQIAMGSNR 219 (746)
Q Consensus 204 ~~l~~~L~~L~l~~N~ 219 (746)
... ....+++++++
T Consensus 328 ~~a--lg~~~~~~~~~ 341 (362)
T 2ra8_A 328 QKS--LPMKIDVSDSQ 341 (362)
T ss_dssp HHH--CCSEEECCSBC
T ss_pred HHH--cCCEEEecCCc
Confidence 331 13568888887
No 411
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.64 E-value=3.8e-06 Score=89.95 Aligned_cols=240 Identities=10% Similarity=0.024 Sum_probs=123.0
Q ss_pred cccccccccEEecccCcCcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCC
Q 041467 13 LCILRTFLRYINLVNNGFNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKL 92 (746)
Q Consensus 13 ~~~~~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L 92 (746)
-+....+|+.+.+.. .++.+-..+|.++.+|+.++|..+ ++.+-...|.+. +|+.+.+..+ +...-...|. ..+|
T Consensus 41 ~~~~~~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~-~~~L 115 (379)
T 4h09_A 41 WYKDRDRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQ-GTDL 115 (379)
T ss_dssp TGGGGGGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTT-TCCC
T ss_pred ccccccCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceec-cCCc
Confidence 344456777887764 466556667888888888888654 554445566665 6777776543 3222223343 3477
Q ss_pred CEEEccCCCCc---CcccCCCCCCEEeccCCCc----ccccCCCCCcEeeCccCcccc------------cCCccccCCC
Q 041467 93 ERLRIDCGGRI---DSLGHLKSLLLLSLAFNQF----LSLSNASSLEMIEFSRNQFSG------------GVSVDFSRLK 153 (746)
Q Consensus 93 ~~L~l~~~~~~---~~~~~l~~L~~L~Ls~N~l----~~l~~l~~L~~L~Ls~N~l~~------------~~~~~~~~l~ 153 (746)
+.+.+..+-.. .+|.+. +|+...+..+-- ..+.++.+++...+..+.... .....+....
T Consensus 116 ~~i~lp~~~~~i~~~~F~~~-~l~~~~~~~~v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (379)
T 4h09_A 116 DDFEFPGATTEIGNYIFYNS-SVKRIVIPKSVTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAK 194 (379)
T ss_dssp SEEECCTTCCEECTTTTTTC-CCCEEEECTTCCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTTC
T ss_pred ccccCCCccccccccccccc-eeeeeeccceeeccccchhcccccccccccccccceeecccceecccccceeccccccc
Confidence 77777542110 223332 344444333211 223445555555554432211 1112233344
Q ss_pred CCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCC
Q 041467 154 NLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVN 233 (746)
Q Consensus 154 ~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~ 233 (746)
++..+.+..+.-. .....+..+.+|+.+.+..+ +.......+.... .|+.+.+..+ ++.+-..+|.++.+
T Consensus 195 ~~~~~~~~~~~~~-------i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~-~L~~i~lp~~-v~~I~~~aF~~~~~ 264 (379)
T 4h09_A 195 TGTEFTIPSTVKT-------VTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMK-ALDEIAIPKN-VTSIGSFLLQNCTA 264 (379)
T ss_dssp CCSEEECCTTCCE-------ECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCS-SCCEEEECTT-CCEECTTTTTTCTT
T ss_pred cccccccccceeE-------Eeecccccccccceeeeccc-eeEEccccccCCc-cceEEEcCCC-ccEeCccccceeeh
Confidence 4444444322111 11233455566666666544 3323334444444 5666666554 44444556666667
Q ss_pred CCeeecccccceecCCcCCCCCCCCceeeccccccc
Q 041467 234 LNWLTMESSQLIGTIPPLIGETPNLQLLNIGGNHLQ 269 (746)
Q Consensus 234 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 269 (746)
|+.+.+.. ++.......|.++++|+.+.+.++.++
T Consensus 265 l~~i~l~~-~i~~i~~~aF~~c~~L~~i~l~~~~i~ 299 (379)
T 4h09_A 265 LKTLNFYA-KVKTVPYLLCSGCSNLTKVVMDNSAIE 299 (379)
T ss_dssp CCEEEECC-CCSEECTTTTTTCTTCCEEEECCTTCC
T ss_pred hccccccc-cceeccccccccccccccccccccccc
Confidence 77766643 344444456666777777766665554
No 412
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.60 E-value=4.3e-06 Score=89.54 Aligned_cols=291 Identities=12% Similarity=0.065 Sum_probs=160.4
Q ss_pred hhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCCCCccchhhcCCCCCCEEEccCCC-Cc--CcccCCCCC
Q 041467 36 HQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNLVRDILTEICSLFKLERLRIDCGG-RI--DSLGHLKSL 112 (746)
Q Consensus 36 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~-~~--~~~~~l~~L 112 (746)
+++....+|+.+.+.. .++.+-..+|.++.+|+.++|..+ +...-...|.+. +|+.+.+..+- .+ .+|.+ .+|
T Consensus 40 ~~~~~~~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~l~~I~~~aF~~-~~L 115 (379)
T 4h09_A 40 PWYKDRDRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMERVKKFGDYVFQG-TDL 115 (379)
T ss_dssp TTGGGGGGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTTCCEECTTTTTT-CCC
T ss_pred cccccccCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCceeeEeccceecc-CCc
Confidence 3566778899999875 456455667999999999999654 544444556665 57766654311 11 23443 367
Q ss_pred CEEeccCCCc----ccccCCCCCcEeeCccCcccccCCccccCCCCCCEEEccCCCCCCCCCCC------ccccccccCC
Q 041467 113 LLLSLAFNQF----LSLSNASSLEMIEFSRNQFSGGVSVDFSRLKNLSWLNLGVNNLGSGTANE------LDFINLLTNC 182 (746)
Q Consensus 113 ~~L~Ls~N~l----~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~------~~~~~~~~~l 182 (746)
+.+.+..+-. ..|.+. +|+.+.+..+ ++.+....|..+.+++.+.+..+......... ......+..+
T Consensus 116 ~~i~lp~~~~~i~~~~F~~~-~l~~~~~~~~-v~~i~~~~f~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (379)
T 4h09_A 116 DDFEFPGATTEIGNYIFYNS-SVKRIVIPKS-VTTIKDGIGYKAENLEKIEVSSNNKNYVAENYVLYNKNKTILESYPAA 193 (379)
T ss_dssp SEEECCTTCCEECTTTTTTC-CCCEEEECTT-CCEECSCTTTTCTTCCEEEECTTCSSEEEETTEEEETTSSEEEECCTT
T ss_pred ccccCCCccccccccccccc-eeeeeeccce-eeccccchhcccccccccccccccceeecccceecccccceecccccc
Confidence 7777765432 123332 4555554433 44455566777777777776654332110000 0011123333
Q ss_pred CCCCEEEcccccccccCChhhhhcccccceEEcccCcccccCCccccCCCCCCeeecccccceecCCcCCCCCCCCceee
Q 041467 183 SKLERLYFNRNGFEGVLPHSIANLSSTIKQIAMGSNRISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLN 262 (746)
Q Consensus 183 ~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~l~~N~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 262 (746)
..+..+.+..+.- ......+.... .|+.+.+..+ +..+....|.++..|+.+.+..+ ++..-...|.++.+|+.+.
T Consensus 194 ~~~~~~~~~~~~~-~i~~~~f~~~~-~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~ 269 (379)
T 4h09_A 194 KTGTEFTIPSTVK-TVTAYGFSYGK-NLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLN 269 (379)
T ss_dssp CCCSEEECCTTCC-EECTTTTTTCS-SCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEE
T ss_pred cccccccccccee-EEeeccccccc-ccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccc
Confidence 4444444433221 12222333332 4555555433 22233445555566666655443 4434444555555565555
Q ss_pred cccccccccccccccccChHHhhhccCCCCCCccccCCCCCCeeeecCCcCccccchhhhhcccccceEEccCccccccC
Q 041467 263 IGGNHLQGSILSSLGNLTLQTYLFNNLQGNIPSSLANCKSLLGLSVSHNKLTSTLPQQILSVTTLSLYLELDNNLLNGSL 342 (746)
Q Consensus 263 Ls~N~l~~~~~~~l~~l~~l~~l~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~~L~Ls~N~l~~~~ 342 (746)
+..+ +.......|.+|.+|+.+.+.++.++..-+..|.++.+| +.++|..+ ++..-
T Consensus 270 l~~~----------------------i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L-~~i~lp~~-l~~I~ 325 (379)
T 4h09_A 270 FYAK----------------------VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKL-SSVTLPTA-LKTIQ 325 (379)
T ss_dssp ECCC----------------------CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTC-CEEECCTT-CCEEC
T ss_pred cccc----------------------ceeccccccccccccccccccccccceehhhhhcCCCCC-CEEEcCcc-ccEEH
Confidence 5332 222334567888889999888888874445566777888 57888655 55344
Q ss_pred chhhhcccCCceeecCCC
Q 041467 343 PPEVGNLKNLLRLHIPEY 360 (746)
Q Consensus 343 p~~~~~l~~L~~L~lp~~ 360 (746)
..+|.++++|+.+.+|+.
T Consensus 326 ~~aF~~C~~L~~i~ip~~ 343 (379)
T 4h09_A 326 VYAFKNCKALSTISYPKS 343 (379)
T ss_dssp TTTTTTCTTCCCCCCCTT
T ss_pred HHHhhCCCCCCEEEECCc
Confidence 567778888888877764
No 413
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.48 E-value=4.5e-07 Score=94.04 Aligned_cols=130 Identities=22% Similarity=0.288 Sum_probs=98.0
Q ss_pred CCCeEeecCCeeEEE----EEeehhhhhhhhhhHHHHHHHHHhhcCC-CCc--eeeEEEEEecCC---cccchhhhccCC
Q 041467 484 PANKIREGGFNIVYN----VAMKVANLKQKEASRSFAAEFNALRNIR-HRN--LIKIITICSSID---FEGFDFKAISNG 553 (746)
Q Consensus 484 ~~~~ig~g~~g~v~~----vavK~~~~~~~~~~~~~~~E~~~l~~l~-Hpn--Iv~l~~~~~~~~---~~~lv~e~~~~g 553 (746)
..+.++.|....||+ +++|+-... .....+.+|+++++.+. +.. +.+.+......+ ..|+||+++++.
T Consensus 24 ~i~~~~~G~~n~v~~v~~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~G~ 101 (304)
T 3sg8_A 24 TIEISGEGNDCIAYEINRDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIKGV 101 (304)
T ss_dssp CCCEEEECSSEEEEESTTSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCCCE
T ss_pred eeEecCCCCcceEEEECCEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccCCe
Confidence 456799999999997 778875422 33467899999998884 332 445555544333 457889999987
Q ss_pred ccc---ccCCCHHHHHHHHHHHHHHHHHHHhcC-----------------------------------------------
Q 041467 554 QLR---LCNLSLTQRVNIAIDVAFAIEYLRHHC----------------------------------------------- 583 (746)
Q Consensus 554 ~l~---~~~l~~~~~~~i~~~i~~~l~yLH~~~----------------------------------------------- 583 (746)
.+. ...++..++..++.++++.++.||+..
T Consensus 102 ~l~~~~~~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l 181 (304)
T 3sg8_A 102 PLTPLLLNNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDDFYRDIL 181 (304)
T ss_dssp ECCHHHHHTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHH
T ss_pred ECCccccccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHHHHHHHH
Confidence 775 245788889999999999999999711
Q ss_pred --------CCCeEEcCCCCCCeeeCC--CCcEEEcccccccc
Q 041467 584 --------QPSIVHGDLKPSNILLDQ--DVVTHVGDLGLAKF 615 (746)
Q Consensus 584 --------~~~ivHrDlkp~NILl~~--~~~~ki~DfGla~~ 615 (746)
.+.++|+|++|.||++++ ...+.|+||+.+..
T Consensus 182 ~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~ 223 (304)
T 3sg8_A 182 ENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAI 223 (304)
T ss_dssp TCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEE
T ss_pred hccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCcc
Confidence 135899999999999987 45688999998865
No 414
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.43 E-value=8.6e-07 Score=92.61 Aligned_cols=129 Identities=17% Similarity=0.174 Sum_probs=98.9
Q ss_pred CCCCCCeEeecCCeeEEE----EEeehhhhhhhhhhHHHHHHHHHhhcCCC----CceeeEEEEEecCCcccchhhhccC
Q 041467 481 NFSPANKIREGGFNIVYN----VAMKVANLKQKEASRSFAAEFNALRNIRH----RNLIKIITICSSIDFEGFDFKAISN 552 (746)
Q Consensus 481 ~~~~~~~ig~g~~g~v~~----vavK~~~~~~~~~~~~~~~E~~~l~~l~H----pnIv~l~~~~~~~~~~~lv~e~~~~ 552 (746)
.+...+.++.|....||+ +++|+.... .....+.+|+++++.+.+ ..|.+++++ +..++||||+++
T Consensus 38 ~i~~v~~l~~G~~n~vy~vg~~~vlR~~~~~--~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme~i~G 111 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLCNEQYVVKVPKRD--SVRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMKYIKG 111 (320)
T ss_dssp CCSCEEEEEECSSEEEEEETTTEEEEEESSH--HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEECCCC
T ss_pred ceEEEEeCCCCCCceEEEECCEEEEEeCCcH--HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEeecCC
Confidence 566778899999999998 677765322 223458999999988876 224455554 567899999998
Q ss_pred Cccc---ccCCCHHHHHHHHHHHHHHHHHHHhcCC---------------------------------------------
Q 041467 553 GQLR---LCNLSLTQRVNIAIDVAFAIEYLRHHCQ--------------------------------------------- 584 (746)
Q Consensus 553 g~l~---~~~l~~~~~~~i~~~i~~~l~yLH~~~~--------------------------------------------- 584 (746)
..+. ...++..++..++.++++.++.||+...
T Consensus 112 ~~l~~~~~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (320)
T 3r70_A 112 ERITYEQYHKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDEMLEHIET 191 (320)
T ss_dssp BCCCHHHHTTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHH
T ss_pred ccccccccccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccccchHHHHH
Confidence 8775 2356788889999999999999996432
Q ss_pred ---------------CCeEEcCCCCCCeeeCCCCcEEEcccccccc
Q 041467 585 ---------------PSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615 (746)
Q Consensus 585 ---------------~~ivHrDlkp~NILl~~~~~~ki~DfGla~~ 615 (746)
+.++|+|++|.||++++++.+.|.||+.+..
T Consensus 192 ~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 192 IYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp HHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 2359999999999999866679999999865
No 415
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.35 E-value=1.3e-07 Score=90.32 Aligned_cols=66 Identities=17% Similarity=0.267 Sum_probs=36.3
Q ss_pred CCCcEeeCccCccccc----CCccccCCCCCCEEEc--cCCCCCCCCCCCccccccccCCCCCCEEEccccccc
Q 041467 129 SSLEMIEFSRNQFSGG----VSVDFSRLKNLSWLNL--GVNNLGSGTANELDFINLLTNCSKLERLYFNRNGFE 196 (746)
Q Consensus 129 ~~L~~L~Ls~N~l~~~----~~~~~~~l~~L~~L~L--s~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~ 196 (746)
++|++|+|++|.|+.. +...+...++|++|+| ++|.|+.... ..+...+...++|++|+|++|.+.
T Consensus 93 ~~L~~L~L~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~--~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 93 NTLKSLNVESNFISGSGILALVEALQSNTSLIELRIDNQSQPLGNNVE--MEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp SSCCEEECCSSCCCHHHHHHHHHGGGGCSSCCEEECCCCSSCCCHHHH--HHHHHHHHHCSSCCEEECCCSSHH
T ss_pred CCcCEEECcCCcCCHHHHHHHHHHHHhCCCceEEEecCCCCCCCHHHH--HHHHHHHHhCCCcCEEeccCCCCC
Confidence 3445555555555432 2233445566777777 6676653100 013344556677888888888775
No 416
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.33 E-value=3.9e-07 Score=91.52 Aligned_cols=64 Identities=25% Similarity=0.259 Sum_probs=35.3
Q ss_pred cccccEEecccCcCcc--cCchhhhCCccCcEEecccCcCCccCCccccCCC--CCCeeeCcCCCCCCcc
Q 041467 17 RTFLRYINLVNNGFNG--EIPHQIGRLISLERLILSNNSFSCAIPANLSSGS--NLIKLSTDSNNLVRDI 82 (746)
Q Consensus 17 ~~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~L~~N~l~~~~ 82 (746)
+++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|.+.+.+
T Consensus 169 l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~ 236 (267)
T 3rw6_A 169 IPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTF 236 (267)
T ss_dssp CTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGC
T ss_pred CCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCcccc
Confidence 4556666666666654 3345555666666666666666543 2233333 5666666666655433
No 417
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.31 E-value=1.6e-07 Score=89.57 Aligned_cols=112 Identities=12% Similarity=0.089 Sum_probs=62.5
Q ss_pred ccCCCCCCEEeccCC-Ccc---------cccCCCCCcEeeCccCcccccC----CccccCCCCCCEEEccCCCCCCCCCC
Q 041467 106 LGHLKSLLLLSLAFN-QFL---------SLSNASSLEMIEFSRNQFSGGV----SVDFSRLKNLSWLNLGVNNLGSGTAN 171 (746)
Q Consensus 106 ~~~l~~L~~L~Ls~N-~l~---------~l~~l~~L~~L~Ls~N~l~~~~----~~~~~~l~~L~~L~Ls~N~l~~~~~~ 171 (746)
+...++|+.|+|++| .+. .+...++|++|+|++|+|.... ...+...++|++|+|++|.|+...
T Consensus 32 l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g-- 109 (185)
T 1io0_A 32 QNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSG-- 109 (185)
T ss_dssp HTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHH--
T ss_pred HhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHH--
Confidence 455667777777777 662 2445667777777777775321 223344567777777777775311
Q ss_pred CccccccccCCCCCCEEEc--ccccccccCC----hhhhhcccccceEEcccCcc
Q 041467 172 ELDFINLLTNCSKLERLYF--NRNGFEGVLP----HSIANLSSTIKQIAMGSNRI 220 (746)
Q Consensus 172 ~~~~~~~~~~l~~L~~L~L--s~N~l~~~~p----~~~~~l~~~L~~L~l~~N~i 220 (746)
...+...+...++|++|+| ++|.|...-. ..+.... .|++|++++|.+
T Consensus 110 ~~~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~-~L~~L~L~~n~i 163 (185)
T 1io0_A 110 ILALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNT-TLLKFGYHFTQQ 163 (185)
T ss_dssp HHHHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCS-SCCEEECCCSSH
T ss_pred HHHHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCC-CcCEEeccCCCC
Confidence 0113444556666777777 6676653211 2222222 355555555554
No 418
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.31 E-value=3.5e-07 Score=91.88 Aligned_cols=80 Identities=24% Similarity=0.326 Sum_probs=46.0
Q ss_pred EeccCCCcccc--------cCCCCCcEeeCccCcccc--cCCccccCCCCCCEEEccCCCCCCCCCCCccccccccCCCC
Q 041467 115 LSLAFNQFLSL--------SNASSLEMIEFSRNQFSG--GVSVDFSRLKNLSWLNLGVNNLGSGTANELDFINLLTNCSK 184 (746)
Q Consensus 115 L~Ls~N~l~~l--------~~l~~L~~L~Ls~N~l~~--~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~ 184 (746)
++++.|+...+ .++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. .....+..+ +
T Consensus 148 l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~-----~~l~~l~~l-~ 221 (267)
T 3rw6_A 148 IDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE-----RELDKIKGL-K 221 (267)
T ss_dssp CCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG-----GGGGGGTTS-C
T ss_pred ccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc-----hhhhhcccC-C
Confidence 55666654222 246677777777777766 3345555677777777777777652 111223333 6
Q ss_pred CCEEEcccccccccCC
Q 041467 185 LERLYFNRNGFEGVLP 200 (746)
Q Consensus 185 L~~L~Ls~N~l~~~~p 200 (746)
|++|+|++|.+.+.+|
T Consensus 222 L~~L~L~~Npl~~~~~ 237 (267)
T 3rw6_A 222 LEELWLDGNSLCDTFR 237 (267)
T ss_dssp CSEEECTTSTTGGGCS
T ss_pred cceEEccCCcCccccC
Confidence 6666666666665544
No 419
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.16 E-value=7e-06 Score=85.03 Aligned_cols=130 Identities=18% Similarity=0.239 Sum_probs=96.4
Q ss_pred CCCeEeecCCeeEEE----EEeehhhhhhhhhhHHHHHHHHHhhcCCCC---ceeeEEEEEe-cCCcccchhhhccCCcc
Q 041467 484 PANKIREGGFNIVYN----VAMKVANLKQKEASRSFAAEFNALRNIRHR---NLIKIITICS-SIDFEGFDFKAISNGQL 555 (746)
Q Consensus 484 ~~~~ig~g~~g~v~~----vavK~~~~~~~~~~~~~~~E~~~l~~l~Hp---nIv~l~~~~~-~~~~~~lv~e~~~~g~l 555 (746)
..+.++.|....||+ +++|+-. .......+.+|+++|+.+.+. -|.+.+.++. ..+..+++||++++..+
T Consensus 23 ~v~~l~~G~~n~v~~vg~~~VlR~~~--~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~~l 100 (306)
T 3tdw_A 23 SVESLGEGFRNYAILVNGDWVFRFPK--SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQIL 100 (306)
T ss_dssp CEEEEEECSSEEEEEETTTEEEEEES--SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSEEC
T ss_pred eeeecCCCcceeEEEECCEEEEEecC--CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCeEC
Confidence 356788888889998 6777642 223356789999999999752 3566777764 44567899999988776
Q ss_pred c---ccCCCHHHHHHHHHHHHHHHHHHHhcC-------------------------------------------------
Q 041467 556 R---LCNLSLTQRVNIAIDVAFAIEYLRHHC------------------------------------------------- 583 (746)
Q Consensus 556 ~---~~~l~~~~~~~i~~~i~~~l~yLH~~~------------------------------------------------- 583 (746)
. ...++..++..++.++++.++.||+..
T Consensus 101 ~~~~~~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l 180 (306)
T 3tdw_A 101 GEDGMAVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTLRFQSYM 180 (306)
T ss_dssp HHHHHTTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHHHHHHHH
T ss_pred chhhhhhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHH
Confidence 4 234567778888888888888888632
Q ss_pred --------CCCeEEcCCCCCCeeeCC---CCc-EEEcccccccc
Q 041467 584 --------QPSIVHGDLKPSNILLDQ---DVV-THVGDLGLAKF 615 (746)
Q Consensus 584 --------~~~ivHrDlkp~NILl~~---~~~-~ki~DfGla~~ 615 (746)
.+.++|+|++|.||+++. ++. +.|+||+.+..
T Consensus 181 ~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 181 THPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred hCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 234699999999999987 455 48999998865
No 420
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=97.92 E-value=1.7e-05 Score=81.21 Aligned_cols=69 Identities=9% Similarity=-0.016 Sum_probs=52.2
Q ss_pred CCCCeEeecCCeeEEE--------EEeehhhhhhhhhhHHHHHHHHHhhcCCCC---ceeeEEEEEecCCcccchhhhcc
Q 041467 483 SPANKIREGGFNIVYN--------VAMKVANLKQKEASRSFAAEFNALRNIRHR---NLIKIITICSSIDFEGFDFKAIS 551 (746)
Q Consensus 483 ~~~~~ig~g~~g~v~~--------vavK~~~~~~~~~~~~~~~E~~~l~~l~Hp---nIv~l~~~~~~~~~~~lv~e~~~ 551 (746)
...+.++.|.++.||+ ++||+...........+.+|++.|+.+.|. .|++++++. ..++||||++
T Consensus 18 ~~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~ 93 (288)
T 3d1u_A 18 AAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVD 93 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCC
T ss_pred cceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecc
Confidence 3467899999999997 788875433222345789999999999865 578888763 4689999998
Q ss_pred CCcc
Q 041467 552 NGQL 555 (746)
Q Consensus 552 ~g~l 555 (746)
++.+
T Consensus 94 g~~~ 97 (288)
T 3d1u_A 94 ERPP 97 (288)
T ss_dssp CCCC
T ss_pred cCCC
Confidence 8764
No 421
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=97.92 E-value=1.9e-05 Score=83.74 Aligned_cols=127 Identities=19% Similarity=0.210 Sum_probs=86.3
Q ss_pred CCCCCeEeecCCeeEEE-------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCc--eeeEEEEEecC-Ccccchhhhcc
Q 041467 482 FSPANKIREGGFNIVYN-------VAMKVANLKQKEASRSFAAEFNALRNIRHRN--LIKIITICSSI-DFEGFDFKAIS 551 (746)
Q Consensus 482 ~~~~~~ig~g~~g~v~~-------vavK~~~~~~~~~~~~~~~E~~~l~~l~Hpn--Iv~l~~~~~~~-~~~~lv~e~~~ 551 (746)
....+.++.|....+|+ +++|+... ...+.+|+.+++.+.... +.++++++... +..++|||+++
T Consensus 43 ~~~i~~l~gG~~n~~y~v~~~g~~~vlK~~~~-----~~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~ 117 (362)
T 3ovc_A 43 VSDLMQLSEGEESRAFSFDVGGRGYVLRVNSC-----ADGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQ 117 (362)
T ss_dssp CEEEEEEEECSSEEEEEEEETTEEEEEEEESC-----CHHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCC
T ss_pred CceEEECCCCCcceEEEEEECCcEEEEEeCCc-----hhhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecC
Confidence 34467788899999997 46665432 125889999998886433 55677776664 56789999998
Q ss_pred CCcccccCCCHHHHHHHHHHHHHHHHHHHhcC------------------------------------------------
Q 041467 552 NGQLRLCNLSLTQRVNIAIDVAFAIEYLRHHC------------------------------------------------ 583 (746)
Q Consensus 552 ~g~l~~~~l~~~~~~~i~~~i~~~l~yLH~~~------------------------------------------------ 583 (746)
+..+. .++..+...++.++++.++-||+..
T Consensus 118 G~~l~--~l~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~~~~~ 195 (362)
T 3ovc_A 118 GVTLQ--DLPETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTVSASV 195 (362)
T ss_dssp SEETT--TSCGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTTHHHH
T ss_pred CCCcc--cCCHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 75543 1223333334444444444444321
Q ss_pred ----------------CCCeEEcCCCCCCeeeCCCCcEEEcccccccc
Q 041467 584 ----------------QPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615 (746)
Q Consensus 584 ----------------~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~ 615 (746)
.+.++|+|+.|.||++++++.+.|.||+.+..
T Consensus 196 ~~~~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~ 243 (362)
T 3ovc_A 196 AQALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMF 243 (362)
T ss_dssp HHHHHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEE
T ss_pred hHHHHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCccccc
Confidence 14579999999999998777788999998865
No 422
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=97.90 E-value=1.5e-05 Score=80.94 Aligned_cols=127 Identities=17% Similarity=0.142 Sum_probs=88.9
Q ss_pred CeEeecCCe-eEEE---------EEeehhhhhhhhhhHHHHHHHHHhhcCC-CCceeeEEEEEecCCcccchhhhccCCc
Q 041467 486 NKIREGGFN-IVYN---------VAMKVANLKQKEASRSFAAEFNALRNIR-HRNLIKIITICSSIDFEGFDFKAISNGQ 554 (746)
Q Consensus 486 ~~ig~g~~g-~v~~---------vavK~~~~~~~~~~~~~~~E~~~l~~l~-HpnIv~l~~~~~~~~~~~lv~e~~~~g~ 554 (746)
+.+..|..| .||+ +.+|+-. ......+.+|+++|+.+. +--|.++++++.+.+..++|||++++..
T Consensus 30 ~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~---~~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~ 106 (272)
T 4gkh_A 30 ARDNVGQSGATIYRLYGKPNAPELFLKHGK---GSVANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKT 106 (272)
T ss_dssp EEEECSSSSCEEEEEECCTTCCCEEEEEEE---THHHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEE
T ss_pred EEccCCCcCCeEEEEEecCCCeEEEEEECC---CCCHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcc
Confidence 345556555 5886 4566543 223456888999998885 3236778899988888999999998776
Q ss_pred ccc-cCCCHHHHHHHHHHHHHHHHHHHhcC--------------------------------------------------
Q 041467 555 LRL-CNLSLTQRVNIAIDVAFAIEYLRHHC-------------------------------------------------- 583 (746)
Q Consensus 555 l~~-~~l~~~~~~~i~~~i~~~l~yLH~~~-------------------------------------------------- 583 (746)
+.. ......+...++.+++..++-||+..
T Consensus 107 ~~~~~~~~~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 186 (272)
T 4gkh_A 107 AFQVLEEYPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEMHKL 186 (272)
T ss_dssp HHHHHHHCGGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHHHHTT
T ss_pred ccccccCCHHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHHHHhc
Confidence 541 11123344567777777777777521
Q ss_pred -----CCCeEEcCCCCCCeeeCCCCcEEEcccccccc
Q 041467 584 -----QPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615 (746)
Q Consensus 584 -----~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~ 615 (746)
.+.++|+|+.+.||++++++.+-|.||+.+..
T Consensus 187 ~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~ 223 (272)
T 4gkh_A 187 LPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGI 223 (272)
T ss_dssp CCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEE
T ss_pred ccccCCcEEEcCCCCCCeEEEECCeEEEEEECccccc
Confidence 01378999999999999877777999998864
No 423
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.62 E-value=4.3e-05 Score=80.89 Aligned_cols=103 Identities=14% Similarity=0.127 Sum_probs=70.4
Q ss_pred HHHHHHHHHhhcCC-C--CceeeEEEEEecC---CcccchhhhccCCccccc-----------CCCHHHHHHHHHHHHHH
Q 041467 513 RSFAAEFNALRNIR-H--RNLIKIITICSSI---DFEGFDFKAISNGQLRLC-----------NLSLTQRVNIAIDVAFA 575 (746)
Q Consensus 513 ~~~~~E~~~l~~l~-H--pnIv~l~~~~~~~---~~~~lv~e~~~~g~l~~~-----------~l~~~~~~~i~~~i~~~ 575 (746)
..+.+|+++++.+. + -.+.++++++.+. +..++|||++++..+... .++..++..++.++++.
T Consensus 72 ~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~g~~~~v~e~l~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 151 (357)
T 3ats_A 72 YRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVLGTPFFLMDYVEGVVPPDVMPYTFGDNWFADAPAERQRQLQDATVAA 151 (357)
T ss_dssp CCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTTSSCEEEEECCCCBCCCBTTBGGGSCSTTTTSCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCccCCceEEEEecCCCChhhcCcccccccccCCCCHHHHHHHHHHHHHH
Confidence 45788999998885 3 3477788887665 356789999987665421 23444444455555554
Q ss_pred HHHHHh------------------------------------------------------c-------CCCCeEEcCCCC
Q 041467 576 IEYLRH------------------------------------------------------H-------CQPSIVHGDLKP 594 (746)
Q Consensus 576 l~yLH~------------------------------------------------------~-------~~~~ivHrDlkp 594 (746)
++-||+ . ..+.++|+|+.|
T Consensus 152 La~LH~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~l~HgDl~~ 231 (357)
T 3ats_A 152 LATLHSIPNAQNTFSFLTQGRTSDTTLHRHFNWVRSWYDFAVEGIGRSPLLERTFEWLQSHWPDDAAAREPVLLWGDARV 231 (357)
T ss_dssp HHHHTTCSSHHHHTGGGC-----CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHTCCHHHHHSCCEEECSSCSG
T ss_pred HHHHhCCCCccCChhhccCCCCCCchHHHHHHHHHHHHHhhccCCCCChHHHHHHHHHHHhCCCcccCCCceEEeCCCCC
Confidence 444442 1 134789999999
Q ss_pred CCeeeCCCCcEEEcccccccc
Q 041467 595 SNILLDQDVVTHVGDLGLAKF 615 (746)
Q Consensus 595 ~NILl~~~~~~ki~DfGla~~ 615 (746)
.||+++++..+.|+||+.|..
T Consensus 232 ~Nil~~~~~~~~vIDwe~a~~ 252 (357)
T 3ats_A 232 GNVLYRDFQPVAVLDWEMVAL 252 (357)
T ss_dssp GGEEEETTEEEEECCGGGCEE
T ss_pred CeEEEeCCcEEEEEccccccc
Confidence 999999654578999998864
No 424
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.44 E-value=6.8e-05 Score=69.68 Aligned_cols=33 Identities=12% Similarity=0.108 Sum_probs=15.1
Q ss_pred ccEEecccCcCcccCchhhhCCccCcEEecccC
Q 041467 20 LRYINLVNNGFNGEIPHQIGRLISLERLILSNN 52 (746)
Q Consensus 20 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 52 (746)
|+.|||+++.++..--..+.++++|++|+|++|
T Consensus 63 L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C 95 (176)
T 3e4g_A 63 IQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKC 95 (176)
T ss_dssp EEEEEEESCCCCGGGGGGGTTCSCCCEEEEESC
T ss_pred EeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCC
Confidence 445555555444332233444444555555544
No 425
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.42 E-value=7.4e-05 Score=69.45 Aligned_cols=93 Identities=10% Similarity=0.101 Sum_probs=51.0
Q ss_pred CchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCC-CCCccchhhcCC----CCCCEEEccCCCCcCcccC
Q 041467 34 IPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNN-LVRDILTEICSL----FKLERLRIDCGGRIDSLGH 108 (746)
Q Consensus 34 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~~~~~~~l----~~L~~L~l~~~~~~~~~~~ 108 (746)
+|.....-..|++||||++.|+..--..+.++++|+.|+|++|. ++..--..+..+ ++|++|+|+++..+..
T Consensus 53 LP~~~~~~~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD--- 129 (176)
T 3e4g_A 53 LPTGPLDKYKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTD--- 129 (176)
T ss_dssp SCCCSTTCCCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCH---
T ss_pred CCcccCCCceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCH---
Confidence 34433233468888888888875544556778888888888875 333222334433 1344554444322210
Q ss_pred CCCCCEEeccCCCcccccCCCCCcEeeCccCc
Q 041467 109 LKSLLLLSLAFNQFLSLSNASSLEMIEFSRNQ 140 (746)
Q Consensus 109 l~~L~~L~Ls~N~l~~l~~l~~L~~L~Ls~N~ 140 (746)
..+..+..+++|+.|+|+++.
T Consensus 130 -----------~Gl~~L~~~~~L~~L~L~~c~ 150 (176)
T 3e4g_A 130 -----------KGIIALHHFRNLKYLFLSDLP 150 (176)
T ss_dssp -----------HHHHHGGGCTTCCEEEEESCT
T ss_pred -----------HHHHHHhcCCCCCEEECCCCC
Confidence 001234556666666666653
No 426
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.21 E-value=0.00063 Score=70.07 Aligned_cols=125 Identities=20% Similarity=0.225 Sum_probs=83.6
Q ss_pred CCCCeEeecCCeeEEE-------EEeehhhhhhhhhhHHHHHHHHHhhcCC---CCceeeEEEEEecCCcccchhhhccC
Q 041467 483 SPANKIREGGFNIVYN-------VAMKVANLKQKEASRSFAAEFNALRNIR---HRNLIKIITICSSIDFEGFDFKAISN 552 (746)
Q Consensus 483 ~~~~~ig~g~~g~v~~-------vavK~~~~~~~~~~~~~~~E~~~l~~l~---HpnIv~l~~~~~~~~~~~lv~e~~~~ 552 (746)
...+.|+.|....+|+ +++|+.... ....+.+|++.|+.+. ..-|++.++++...+..++|||++++
T Consensus 39 ~~~~~l~gG~~n~~y~v~~~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G 115 (312)
T 3jr1_A 39 KHKEKLYSGEMNEIWLINDEVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNK 115 (312)
T ss_dssp CEEEEECCSSSSEEEEEESSSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCC
T ss_pred eeeEEeCCccceeeeEEEECCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccC
Confidence 3456788899999997 577765422 3456889999998885 35688888888887889999999987
Q ss_pred Cccc------------------c-cC-------------------CCHHHHH---HHHHHH-------------HHHH--
Q 041467 553 GQLR------------------L-CN-------------------LSLTQRV---NIAIDV-------------AFAI-- 576 (746)
Q Consensus 553 g~l~------------------~-~~-------------------l~~~~~~---~i~~~i-------------~~~l-- 576 (746)
.... . .. -+|.... ++..++ .+.+
T Consensus 116 ~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~ 195 (312)
T 3jr1_A 116 SKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQI 195 (312)
T ss_dssp CCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHH
T ss_pred CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHH
Confidence 6541 0 00 1343321 111111 1112
Q ss_pred --HHHHh-cCCCCeEEcCCCCCCeeeCCCCcEEEcccc
Q 041467 577 --EYLRH-HCQPSIVHGDLKPSNILLDQDVVTHVGDLG 611 (746)
Q Consensus 577 --~yLH~-~~~~~ivHrDlkp~NILl~~~~~~ki~DfG 611 (746)
+.|.. ...|.++|+|+.+.||+++.++ +.|.||+
T Consensus 196 l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 196 VADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 23321 2356899999999999999887 8899984
No 427
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.13 E-value=0.00051 Score=71.93 Aligned_cols=44 Identities=25% Similarity=0.272 Sum_probs=34.7
Q ss_pred HHHHHHHHHh----------cCCCCeEEcCCCCCCeeeCCCCcEEEcccccccc
Q 041467 572 VAFAIEYLRH----------HCQPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615 (746)
Q Consensus 572 i~~~l~yLH~----------~~~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~ 615 (746)
+..++++|+. ...+.++|+|+++.||+++.++.+.|+||+.+..
T Consensus 199 ~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 199 GLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp HHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred HHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 4446677763 1245899999999999998888999999998754
No 428
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.09 E-value=0.00026 Score=76.09 Aligned_cols=66 Identities=17% Similarity=0.185 Sum_probs=42.7
Q ss_pred CCeEeecCCeeEEE---------EEeehhhhhhh-------hhhHHHHHHHHHhhcCCC--Cc-eeeEEEEEecCCcccc
Q 041467 485 ANKIREGGFNIVYN---------VAMKVANLKQK-------EASRSFAAEFNALRNIRH--RN-LIKIITICSSIDFEGF 545 (746)
Q Consensus 485 ~~~ig~g~~g~v~~---------vavK~~~~~~~-------~~~~~~~~E~~~l~~l~H--pn-Iv~l~~~~~~~~~~~l 545 (746)
.+.+|.|..+.||+ |+||....... ....++.+|+++++.+.+ |. +.+++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 56789999999997 56775431110 123457889999888742 33 4456654 3445678
Q ss_pred hhhhccC
Q 041467 546 DFKAISN 552 (746)
Q Consensus 546 v~e~~~~ 552 (746)
|||++++
T Consensus 113 vmE~l~g 119 (397)
T 2olc_A 113 VMEDLSH 119 (397)
T ss_dssp EECCCTT
T ss_pred EEEeCCC
Confidence 9999865
No 429
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.85 E-value=0.00055 Score=64.81 Aligned_cols=83 Identities=11% Similarity=0.069 Sum_probs=38.2
Q ss_pred CCCCCEEeccCC-Ccc---------cccCCCCCcEeeCccCcccccCCcc----ccCCCCCCEEEccCCCCCCCCCCCcc
Q 041467 109 LKSLLLLSLAFN-QFL---------SLSNASSLEMIEFSRNQFSGGVSVD----FSRLKNLSWLNLGVNNLGSGTANELD 174 (746)
Q Consensus 109 l~~L~~L~Ls~N-~l~---------~l~~l~~L~~L~Ls~N~l~~~~~~~----~~~l~~L~~L~Ls~N~l~~~~~~~~~ 174 (746)
-+.|+.|+|++| ++. .+..-+.|+.|+|++|+|....-.. +..-+.|+.|+|+.|.|+... ...
T Consensus 40 n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~G--a~a 117 (197)
T 1pgv_A 40 DTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPEL--LAR 117 (197)
T ss_dssp CSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHH--HHH
T ss_pred CCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHH--HHH
Confidence 345556666553 541 2334455666666666655322111 223355666666666654310 011
Q ss_pred ccccccCCCCCCEEEcccc
Q 041467 175 FINLLTNCSKLERLYFNRN 193 (746)
Q Consensus 175 ~~~~~~~l~~L~~L~Ls~N 193 (746)
+.+.+..-+.|++|+|++|
T Consensus 118 la~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 118 LLRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHHHTTTTCCCSEEECCCC
T ss_pred HHHHHhhCCceeEEECCCC
Confidence 2233334445566666543
No 430
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.80 E-value=0.00062 Score=64.46 Aligned_cols=92 Identities=14% Similarity=0.128 Sum_probs=59.1
Q ss_pred cccCCCCCCEEeccCCCccc---------ccCCCCCcEeeCccCcccccCC----ccccCCCCCCEEEccCCCC-CCCCC
Q 041467 105 SLGHLKSLLLLSLAFNQFLS---------LSNASSLEMIEFSRNQFSGGVS----VDFSRLKNLSWLNLGVNNL-GSGTA 170 (746)
Q Consensus 105 ~~~~l~~L~~L~Ls~N~l~~---------l~~l~~L~~L~Ls~N~l~~~~~----~~~~~l~~L~~L~Ls~N~l-~~~~~ 170 (746)
.+..-+.|+.|+|++|++.. +..-+.|+.|+|+.|+|...-- ..+..-+.|++|+|++|.. .-+..
T Consensus 65 aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~aL~~N~tL~~L~L~n~~~~~ig~~ 144 (197)
T 1pgv_A 65 AACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLRSTLVTQSIVEFKADNQRQSVLGNQ 144 (197)
T ss_dssp HHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHHHTTTTCCCSEEECCCCSSCCCCHH
T ss_pred HHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHHHHhhCCceeEEECCCCcCcCcCHH
Confidence 45556788888888888832 3345789999999999874322 2344557799999986533 11000
Q ss_pred CCccccccccCCCCCCEEEccccccc
Q 041467 171 NELDFINLLTNCSKLERLYFNRNGFE 196 (746)
Q Consensus 171 ~~~~~~~~~~~l~~L~~L~Ls~N~l~ 196 (746)
....+.+.+..-+.|+.|+++.|.+.
T Consensus 145 g~~~ia~aL~~N~tL~~L~l~~~~~g 170 (197)
T 1pgv_A 145 VEMDMMMAIEENESLLRVGISFASME 170 (197)
T ss_dssp HHHHHHHHHHHCSSCCEEECCCCCHH
T ss_pred HHHHHHHHHHhCCCcCeEeccCCCcc
Confidence 01123344556678889999887653
No 431
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=96.61 E-value=0.0046 Score=66.74 Aligned_cols=31 Identities=29% Similarity=0.572 Sum_probs=27.4
Q ss_pred CCCeEEcCCCCCCeeeCCCCcEEEcccccccc
Q 041467 584 QPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615 (746)
Q Consensus 584 ~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~ 615 (746)
.+.++|+|++|.||+++.++ ++|.||+.+..
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~ 261 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFY 261 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEE
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCccccc
Confidence 45899999999999998776 99999998865
No 432
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.51 E-value=0.0027 Score=65.81 Aligned_cols=146 Identities=14% Similarity=0.127 Sum_probs=78.7
Q ss_pred CcccHHHHhhhhcCCCC-----CCeEeecCCeeEEE-------EEeehhhhhhhhhhHHHHHHHHHhhcCCCCc--eeeE
Q 041467 468 PMISHAELSKATNNFSP-----ANKIREGGFNIVYN-------VAMKVANLKQKEASRSFAAEFNALRNIRHRN--LIKI 533 (746)
Q Consensus 468 ~~~~~~~~~~~~~~~~~-----~~~ig~g~~g~v~~-------vavK~~~~~~~~~~~~~~~E~~~l~~l~Hpn--Iv~l 533 (746)
..++.+++......|.. .+.|+.|....+|+ +++|+.... .....+..|+++++.+.... +.++
T Consensus 5 ~~~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g~~vlk~~~~~--~~~~~l~~e~~~l~~L~~~g~~vP~~ 82 (322)
T 2ppq_A 5 TDITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKDPLILTLYEKR--VEKNDLPFFLGLMQHLAAKGLSCPLP 82 (322)
T ss_dssp CCCCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSCCEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCB
T ss_pred ccCCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCccEEEEEeCCC--CCHHHHHHHHHHHHHHHHCCCCCCcc
Confidence 34555666665555654 23455677788887 567766431 12234667888777764222 2333
Q ss_pred EEE------EecCCcccchhhhccCCccc--------------------ccCC-----------CHHHHHH---------
Q 041467 534 ITI------CSSIDFEGFDFKAISNGQLR--------------------LCNL-----------SLTQRVN--------- 567 (746)
Q Consensus 534 ~~~------~~~~~~~~lv~e~~~~g~l~--------------------~~~l-----------~~~~~~~--------- 567 (746)
+.. ....+..+.+++++++..+. ...+ .|.....
T Consensus 83 ~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 162 (322)
T 2ppq_A 83 LPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEV 162 (322)
T ss_dssp CCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGT
T ss_pred cCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhh
Confidence 321 11123456788888765431 0000 1211000
Q ss_pred ---HHHHHHHHHHHHHhcC----CCCeEEcCCCCCCeeeCCCCcEEEcccccccc
Q 041467 568 ---IAIDVAFAIEYLRHHC----QPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615 (746)
Q Consensus 568 ---i~~~i~~~l~yLH~~~----~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~ 615 (746)
+...+...++++++.. ...++|+|+.+.||++++++.+.|+||+.+..
T Consensus 163 ~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 163 EKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp STTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred hhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 0012344556665431 24799999999999998776668999998754
No 433
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.50 E-value=0.0028 Score=55.90 Aligned_cols=56 Identities=16% Similarity=0.295 Sum_probs=45.3
Q ss_pred cEEecccCcCc-ccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcCCCC
Q 041467 21 RYINLVNNGFN-GEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDSNNL 78 (746)
Q Consensus 21 ~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l 78 (746)
..++.++++++ ..+|..+. .+|++|+|++|+|+...+..|..+++|+.|+|++|.+
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPW 67 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCC
T ss_pred CEEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCe
Confidence 48899999986 36775543 3699999999999976667788899999999999966
No 434
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.50 E-value=0.0035 Score=55.26 Aligned_cols=36 Identities=25% Similarity=0.207 Sum_probs=16.9
Q ss_pred CCCEEEccCCCCCCCCCCCccccccccCCCCCCEEEcccccc
Q 041467 154 NLSWLNLGVNNLGSGTANELDFINLLTNCSKLERLYFNRNGF 195 (746)
Q Consensus 154 ~L~~L~Ls~N~l~~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l 195 (746)
+|++|+|++|+|+.++. ..|..+++|+.|+|++|.+
T Consensus 32 ~l~~L~Ls~N~l~~l~~------~~f~~l~~L~~L~L~~NP~ 67 (130)
T 3rfe_A 32 DTTELVLTGNNLTALPP------GLLDALPALRTAHLGANPW 67 (130)
T ss_dssp TCSEEECTTSCCSSCCT------TTGGGCTTCCEEECCSSCC
T ss_pred CCCEEECCCCcCCccCh------hhhhhccccCEEEecCCCe
Confidence 35555555555544222 2234445555555555544
No 435
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=96.49 E-value=0.0034 Score=63.94 Aligned_cols=69 Identities=9% Similarity=-0.009 Sum_probs=45.1
Q ss_pred CCCCCeEeecCCeeEEE--------EEeehhhhhhhhhhHHHHHHHHHhhcCCC--C-ceeeEEEEEecCCcccchhhhc
Q 041467 482 FSPANKIREGGFNIVYN--------VAMKVANLKQKEASRSFAAEFNALRNIRH--R-NLIKIITICSSIDFEGFDFKAI 550 (746)
Q Consensus 482 ~~~~~~ig~g~~g~v~~--------vavK~~~~~~~~~~~~~~~E~~~l~~l~H--p-nIv~l~~~~~~~~~~~lv~e~~ 550 (746)
....+.+|.|..+.||+ |.+|+-..........|.+|++.|+.+.- + -+++.+++. ..++|||++
T Consensus 17 v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~~----~~~lv~e~l 92 (288)
T 3f7w_A 17 VAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWV 92 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECC
T ss_pred eEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEecc----CceEEEEee
Confidence 44567889999999998 67786543333333458899999888742 1 244555542 346778887
Q ss_pred cCCc
Q 041467 551 SNGQ 554 (746)
Q Consensus 551 ~~g~ 554 (746)
..+.
T Consensus 93 ~~~~ 96 (288)
T 3f7w_A 93 DERP 96 (288)
T ss_dssp CCCC
T ss_pred cccC
Confidence 5543
No 436
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.40 E-value=0.0059 Score=62.56 Aligned_cols=125 Identities=14% Similarity=0.079 Sum_probs=76.2
Q ss_pred CCCCCeEeecCCeeEEE---EEeehhhhhhhhhhHHHHHHHHHhhcCCCCce-eeEEEEEecCCcccchhhhc-cCCccc
Q 041467 482 FSPANKIREGGFNIVYN---VAMKVANLKQKEASRSFAAEFNALRNIRHRNL-IKIITICSSIDFEGFDFKAI-SNGQLR 556 (746)
Q Consensus 482 ~~~~~~ig~g~~g~v~~---vavK~~~~~~~~~~~~~~~E~~~l~~l~HpnI-v~l~~~~~~~~~~~lv~e~~-~~g~l~ 556 (746)
+...+.++.|....+|+ +.+|+..... .......+|+.+++.+..-.+ .++++++ .+.-++++||+ ++..+.
T Consensus 20 ~~~i~~l~gG~tN~~~~~~~~vlR~~~~~~-~~~~~r~~E~~~l~~l~~~g~~P~~~~~~--~~~~~~v~e~i~~g~~l~ 96 (301)
T 3dxq_A 20 YTGPLERLGGLTNLVFRAGDLCLRIPGKGT-EEYINRANEAVAAREAAKAGVSPEVLHVD--PATGVMVTRYIAGAQTMS 96 (301)
T ss_dssp CCSCEEEESCSSEEEEEETTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEEC--TTTCCEEEECCTTCEECC
T ss_pred ccceeEcCCccccccceeeeEEEECCCCCc-cceeCHHHHHHHHHHHHHcCCCCceEEEE--CCCCEEEEeecCCCccCC
Confidence 33478898899999998 4555443221 111123568888877753222 4555543 33457889999 443332
Q ss_pred ccCCCHHHH---HHHHHHHHHHHHHHHhcC--------------------------------------------------
Q 041467 557 LCNLSLTQR---VNIAIDVAFAIEYLRHHC-------------------------------------------------- 583 (746)
Q Consensus 557 ~~~l~~~~~---~~i~~~i~~~l~yLH~~~-------------------------------------------------- 583 (746)
.... ..++.++++.++-+|+..
T Consensus 97 -----~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~ 171 (301)
T 3dxq_A 97 -----PEKFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRSALAAHPL 171 (301)
T ss_dssp -----HHHHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHHHHHSSCC
T ss_pred -----HhhHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHHHHHhcCC
Confidence 2111 224555666666666531
Q ss_pred CCCeEEcCCCCCCeeeCCCCcEEEcccccccc
Q 041467 584 QPSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615 (746)
Q Consensus 584 ~~~ivHrDlkp~NILl~~~~~~ki~DfGla~~ 615 (746)
.+.++|+|+.|.||+ ..++.+.++||..|..
T Consensus 172 ~~~l~HgDl~~~Nil-~~~~~~~lID~e~a~~ 202 (301)
T 3dxq_A 172 PLAACHCDPLCENFL-DTGERMWIVDWEYSGM 202 (301)
T ss_dssp CCEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred CceeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence 123799999999999 5567889999988764
No 437
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=95.36 E-value=0.008 Score=64.94 Aligned_cols=30 Identities=30% Similarity=0.434 Sum_probs=24.8
Q ss_pred CeEEcCCCCCCeeeCCC----------------------------CcEEEcccccccc
Q 041467 586 SIVHGDLKPSNILLDQD----------------------------VVTHVGDLGLAKF 615 (746)
Q Consensus 586 ~ivHrDlkp~NILl~~~----------------------------~~~ki~DfGla~~ 615 (746)
.++|+|+.+.||+++++ +.+.|+||..|..
T Consensus 250 v~~H~Dl~~gNiL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lIDfEya~~ 307 (429)
T 1nw1_A 250 TFCHNDLQEGNILLPKASSGNIRMPSLSDETQALGNSLSAFNPADPRLVLIDFEYASY 307 (429)
T ss_dssp EEECSCCCGGGEEEEC------------------------------CCEECCCTTCEE
T ss_pred EEEeCCCCCCeEEeeCCccccccccccccccccccccccccccCCCeEEEEecccCCc
Confidence 68999999999999875 6789999988754
No 438
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=95.31 E-value=0.029 Score=60.89 Aligned_cols=66 Identities=18% Similarity=0.122 Sum_probs=35.9
Q ss_pred CCeEeecCCeeEEEEE---------eehhhhhhhhhhHHHHHHHHHhhcCCCCce-eeEEEEEecCCcccchhhhccCCc
Q 041467 485 ANKIREGGFNIVYNVA---------MKVANLKQKEASRSFAAEFNALRNIRHRNL-IKIITICSSIDFEGFDFKAISNGQ 554 (746)
Q Consensus 485 ~~~ig~g~~g~v~~va---------vK~~~~~~~~~~~~~~~E~~~l~~l~HpnI-v~l~~~~~~~~~~~lv~e~~~~g~ 554 (746)
.+.|+.|-...+|+|. +|+.... ....-.-.+|..+++.+...++ .++++.+.. +.||||+++..
T Consensus 113 i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~-~~~~idR~~E~~vl~~L~~~gl~P~ll~~~~~----G~v~e~I~G~~ 187 (458)
T 2qg7_A 113 FQIINGGITNILIKVKDMSKQAKYLIRLYGPK-TDEIINREREKKISCILYNKNIAKKIYVFFTN----GRIEEFMDGYA 187 (458)
T ss_dssp EEEECC--CEEEEEEEETTTTEEEEEEEECC--CCSCSCHHHHHHHHHHHTTSSSBCCEEEEETT----EEEEECCCSEE
T ss_pred EEEcCCCeEeEEEEEEECCCCceEEEEECCCC-hhhhcCHHHHHHHHHHHHhcCCCCCEEEEeCC----eEEEEeeCCcc
Confidence 4566667777888743 3332211 1111112589999988864444 567776632 35888887644
Q ss_pred c
Q 041467 555 L 555 (746)
Q Consensus 555 l 555 (746)
+
T Consensus 188 l 188 (458)
T 2qg7_A 188 L 188 (458)
T ss_dssp C
T ss_pred C
Confidence 3
No 439
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=95.21 E-value=0.015 Score=61.42 Aligned_cols=100 Identities=14% Similarity=0.104 Sum_probs=62.6
Q ss_pred hHHHHHHHHHhhcCC-CCceeeEEEEEecCCcccchhhhccCCcccc---------------------------cCCC--
Q 041467 512 SRSFAAEFNALRNIR-HRNLIKIITICSSIDFEGFDFKAISNGQLRL---------------------------CNLS-- 561 (746)
Q Consensus 512 ~~~~~~E~~~l~~l~-HpnIv~l~~~~~~~~~~~lv~e~~~~g~l~~---------------------------~~l~-- 561 (746)
.....+|.++++.+. +.-..++++.+.. .+||||+++..+.. ....
T Consensus 97 ~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l 172 (379)
T 3feg_A 97 VDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWL 172 (379)
T ss_dssp HHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccH
Confidence 345678999998885 3333566766643 38899987654420 0111
Q ss_pred HHHHHHHHHHHHH-------------------HHHHHHh----c-CCCCeEEcCCCCCCeeeCCC----CcEEEcccccc
Q 041467 562 LTQRVNIAIDVAF-------------------AIEYLRH----H-CQPSIVHGDLKPSNILLDQD----VVTHVGDLGLA 613 (746)
Q Consensus 562 ~~~~~~i~~~i~~-------------------~l~yLH~----~-~~~~ivHrDlkp~NILl~~~----~~~ki~DfGla 613 (746)
+.++.++..++.. .++.|.. . ....++|+|+.+.||+++.+ +.+.++||..|
T Consensus 173 ~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a 252 (379)
T 3feg_A 173 FGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYS 252 (379)
T ss_dssp HHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTC
T ss_pred HHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccC
Confidence 3444444443321 2333322 1 22368999999999999876 78999999987
Q ss_pred cc
Q 041467 614 KF 615 (746)
Q Consensus 614 ~~ 615 (746)
..
T Consensus 253 ~~ 254 (379)
T 3feg_A 253 SY 254 (379)
T ss_dssp EE
T ss_pred Cc
Confidence 64
No 440
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=95.09 E-value=0.036 Score=57.25 Aligned_cols=29 Identities=34% Similarity=0.314 Sum_probs=25.2
Q ss_pred CCeEEcCCCCCCeeeCCCCcEEEcccccccc
Q 041467 585 PSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615 (746)
Q Consensus 585 ~~ivHrDlkp~NILl~~~~~~ki~DfGla~~ 615 (746)
..++|+|+++.||+++ + .+.|+||+.+..
T Consensus 195 ~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 195 VLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp CEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred eeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 4688999999999999 4 899999988754
No 441
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=94.30 E-value=0.036 Score=58.43 Aligned_cols=30 Identities=23% Similarity=0.365 Sum_probs=24.7
Q ss_pred CCeEEcCCCCCCeeeCCCCcEEEcccccccc
Q 041467 585 PSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615 (746)
Q Consensus 585 ~~ivHrDlkp~NILl~~~~~~ki~DfGla~~ 615 (746)
..++|+|+.+.||++++++ +.++||..|..
T Consensus 212 ~~l~HgDl~~~Nil~~~~~-~~lID~e~a~~ 241 (369)
T 3c5i_A 212 IVFCHNDLQENNIINTNKC-LRLIDFEYSGF 241 (369)
T ss_dssp EEEECSCCCGGGEEECC-C-EEECCCTTCEE
T ss_pred eEEEeCCCCcccEEecCCc-EEEEEecCCCC
Confidence 3689999999999998654 89999987753
No 442
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=93.65 E-value=0.055 Score=56.32 Aligned_cols=31 Identities=16% Similarity=0.273 Sum_probs=27.7
Q ss_pred CCeEEcCCCCCCeeeCCCCcEEEcccccccc
Q 041467 585 PSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615 (746)
Q Consensus 585 ~~ivHrDlkp~NILl~~~~~~ki~DfGla~~ 615 (746)
..++|+|+.+.||++++++.+.|.||+.+..
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 4799999999999999888899999987764
No 443
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=91.35 E-value=0.17 Score=53.62 Aligned_cols=31 Identities=23% Similarity=0.286 Sum_probs=26.9
Q ss_pred CCeEEcCCCCCCeeeCCC------CcEEEcccccccc
Q 041467 585 PSIVHGDLKPSNILLDQD------VVTHVGDLGLAKF 615 (746)
Q Consensus 585 ~~ivHrDlkp~NILl~~~------~~~ki~DfGla~~ 615 (746)
..++|+|+.+.||+++.+ +.+.++||..|..
T Consensus 244 ~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 244 VVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred eeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 368899999999999876 7899999988753
No 444
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=88.34 E-value=0.31 Score=52.05 Aligned_cols=30 Identities=20% Similarity=0.285 Sum_probs=26.4
Q ss_pred CCeEEcCCCCCCeeeCCCCcEEEcccccccc
Q 041467 585 PSIVHGDLKPSNILLDQDVVTHVGDLGLAKF 615 (746)
Q Consensus 585 ~~ivHrDlkp~NILl~~~~~~ki~DfGla~~ 615 (746)
..++|+|+.+.||+ +.++.+.++||..|..
T Consensus 262 ~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 262 LVFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp EEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred ceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 36899999999999 7788999999988864
No 445
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=86.46 E-value=0.62 Score=47.92 Aligned_cols=32 Identities=28% Similarity=0.293 Sum_probs=27.7
Q ss_pred CCCeEEcCCCCCCeeeCCC----CcEEEcccccccc
Q 041467 584 QPSIVHGDLKPSNILLDQD----VVTHVGDLGLAKF 615 (746)
Q Consensus 584 ~~~ivHrDlkp~NILl~~~----~~~ki~DfGla~~ 615 (746)
.+.++|||+.+.||+++.+ +.+.|.||+.+..
T Consensus 182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 4479999999999999874 6899999998865
No 446
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=72.82 E-value=3.2 Score=39.30 Aligned_cols=86 Identities=12% Similarity=0.140 Sum_probs=60.0
Q ss_pred CCCceeeEEEEEecCCcccchhhhccCC-ccc-ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCCCCCCeeeCCCC
Q 041467 526 RHRNLIKIITICSSIDFEGFDFKAISNG-QLR-LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDLKPSNILLDQDV 603 (746)
Q Consensus 526 ~HpnIv~l~~~~~~~~~~~lv~e~~~~g-~l~-~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDlkp~NILl~~~~ 603 (746)
.||+.+.. .+-.+.+...+.++.-+.+ ++. -...+...+++++..|+...++++. -+|=-+.|+||.+|.++
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~ik~~~~~eKlr~l~ni~~l~~~~~~-----r~tf~L~P~NL~f~~~~ 116 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDINDNHTPFDNIKSFTKNEKLRYLLNIKNLEEVNRT-----RYTFVLAPDELFFTRDG 116 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCTTSEEGGGGGGSCHHHHHHHHHHGGGGGGGGGS-----SEECCCSGGGEEECTTS
T ss_pred cCCcccce-EEEEcccEEEEEEEcCcccCCHHHHHhcCHHHHHHHHHHHHHHHHHhcC-----ceEEEEecceEEEcCCC
Confidence 58888865 4444555443333332211 111 4567899999999999988866543 47888999999999999
Q ss_pred cEEEcccccccccc
Q 041467 604 VTHVGDLGLAKFLY 617 (746)
Q Consensus 604 ~~ki~DfGla~~~~ 617 (746)
.+++.-.|+-..+.
T Consensus 117 ~p~i~~RGik~~l~ 130 (215)
T 4ann_A 117 LPIAKTRGLQNVVD 130 (215)
T ss_dssp CEEESCCEETTTBS
T ss_pred CEEEEEccCccCCC
Confidence 99999888765553
No 447
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=67.09 E-value=5.6 Score=37.78 Aligned_cols=84 Identities=15% Similarity=0.080 Sum_probs=55.9
Q ss_pred CCCceeeEEEEEecCCcccchhhhccCCcc-c-ccCCCHHHHHHHHHHHHHHHH-HHHhcCCCCeEEcCCCCCCeeeCCC
Q 041467 526 RHRNLIKIITICSSIDFEGFDFKAISNGQL-R-LCNLSLTQRVNIAIDVAFAIE-YLRHHCQPSIVHGDLKPSNILLDQD 602 (746)
Q Consensus 526 ~HpnIv~l~~~~~~~~~~~lv~e~~~~g~l-~-~~~l~~~~~~~i~~~i~~~l~-yLH~~~~~~ivHrDlkp~NILl~~~ 602 (746)
.||+. . ...-.+.+...+.++.-+.+.- . ...++..++++++..|+...+ +++ .-+|=-+.|+||.+|.+
T Consensus 48 ~~~~f-~-~~I~~~eD~~~i~y~~~~~~~~f~~i~~~~~~eKlrll~nl~~L~~~~~~-----~r~tf~l~P~NL~f~~~ 120 (219)
T 4ano_A 48 VDPCI-V-RDIDVSEDEVKVVIKPPSSFLTFAAIRKTTLLSRIRAAIHLVSKVKHHSA-----RRLIFIVCPENLMFNRA 120 (219)
T ss_dssp SCSSS-E-EEEEECSSEEEEEEECCTTCEEHHHHHTSCHHHHHHHHHHHHHHHSSCCS-----SSEECCCCGGGEEECTT
T ss_pred cCCCC-C-eEEEEeCCEEEEEEEcCcccCcHHHHHhcCHHHHHHHHHHHHHHHHHhhh-----CceeEEEeCceEEEeCC
Confidence 47887 2 2333444444333332222211 1 456788999999999887766 443 45788889999999999
Q ss_pred CcEEEccccccccc
Q 041467 603 VVTHVGDLGLAKFL 616 (746)
Q Consensus 603 ~~~ki~DfGla~~~ 616 (746)
+.+++.-.|+-..+
T Consensus 121 ~~p~i~hRGi~~~l 134 (219)
T 4ano_A 121 LEPFFLHVGVKESL 134 (219)
T ss_dssp CCEEESCCEETTTB
T ss_pred CcEEEEEcCCcccC
Confidence 99999988876554
No 448
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=65.51 E-value=3.1 Score=39.48 Aligned_cols=84 Identities=11% Similarity=0.014 Sum_probs=51.4
Q ss_pred ccCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEcCC-CCCCeeeCCCCcEEEccccccccccCCCCCCCccccccccccc
Q 041467 557 LCNLSLTQRVNIAIDVAFAIEYLRHHCQPSIVHGDL-KPSNILLDQDVVTHVGDLGLAKFLYGYEPGTTAETASSSIGIN 635 (746)
Q Consensus 557 ~~~l~~~~~~~i~~~i~~~l~yLH~~~~~~ivHrDl-kp~NILl~~~~~~ki~DfGla~~~~~~~~~~~~~~~~~~~~~~ 635 (746)
..+++++++..++.|.+++|.-.-.+..+ |..| -|..|++..+|.+...+ +.+. .
T Consensus 43 ~~PlsEEqaWALc~Qc~~~L~~~~~~~~~---~~~i~~~~~i~l~~dG~V~f~~-~~s~--------------------~ 98 (229)
T 2yle_A 43 NQPINEEQAWAVCYQCCGSLRAAARRRQP---RHRVRSAAQIRVWRDGAVTLAP-AADD--------------------A 98 (229)
T ss_dssp TSCCCHHHHHHHHHHHHHHHHHHHHTTCC---CCCCCSGGGEEEETTSCEEECC-C------------------------
T ss_pred CCCcCHHHHHHHHHHHHHHHHhhhhcccC---CceecCCcceEEecCCceeccc-cccc--------------------c
Confidence 67899999999999999988665221111 2333 36788898999888763 2211 0
Q ss_pred ccccccccccccccccccCCCccceeeccceee
Q 041467 636 GTVGYVAPVIIAARNLENREKRHTVMSFPQRFA 668 (746)
Q Consensus 636 gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~i~~ 668 (746)
....+.|||.... ..+.+.=|||+|+++|
T Consensus 99 ~~~~~~~pe~~~~----~~te~~~IysLG~tLY 127 (229)
T 2yle_A 99 GEPPPVAGKLGYS----QCMETEVIESLGIIIY 127 (229)
T ss_dssp --------CCSSS----SSCHHHHHHHHHHHHH
T ss_pred cccCCCChhhccc----cchHHHHHHHHHHHHH
Confidence 1235678988641 1233478999999998
No 449
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=60.14 E-value=1.3 Score=48.00 Aligned_cols=53 Identities=9% Similarity=0.019 Sum_probs=15.3
Q ss_pred CCCeEeecCCeeEEE---------EEe------ehhhhhh--hhhhHHHHHHHHHhhcCCCCceeeEEEEEec
Q 041467 484 PANKIREGGFNIVYN---------VAM------KVANLKQ--KEASRSFAAEFNALRNIRHRNLIKIITICSS 539 (746)
Q Consensus 484 ~~~~ig~g~~g~v~~---------vav------K~~~~~~--~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~ 539 (746)
..+.+| ||.||+ ||| |..+... .+....+.+|+.+++..+|||+++.+++...
T Consensus 146 l~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 146 IYEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp STTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred ccccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence 345555 999986 677 5443211 2233568899999999999999998876543
No 450
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=50.89 E-value=6.7 Score=41.33 Aligned_cols=29 Identities=24% Similarity=0.394 Sum_probs=24.7
Q ss_pred eEEcCCCCCCeee------CCCCcEEEcccccccc
Q 041467 587 IVHGDLKPSNILL------DQDVVTHVGDLGLAKF 615 (746)
Q Consensus 587 ivHrDlkp~NILl------~~~~~~ki~DfGla~~ 615 (746)
++|+|+.+.||++ +++..++++||-.|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 5699999999999 4567899999988754
No 451
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=28.61 E-value=68 Score=25.92 Aligned_cols=47 Identities=9% Similarity=0.020 Sum_probs=32.7
Q ss_pred cccccCCccccCCCCCCeeecccccceecCCcCCCCCCCCceeecccc
Q 041467 219 RISSTIPHGIRNLVNLNWLTMESSQLIGTIPPLIGETPNLQLLNIGGN 266 (746)
Q Consensus 219 ~i~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 266 (746)
.++.+-..+|.++.+|+.+.+-. .++..-...|.++.+|+.+.+...
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~-~v~~Ig~~aF~~C~~L~~i~~~~~ 53 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQP-NIGLLYDGMFSGCTALEKLILTGE 53 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECT-TSSCCCTTSSTTCTTCCCEEECCS
T ss_pred ccCEecHHHhcCCCCCcEEEcCC-chheEcHHHHhccCCccEEEEcCC
Confidence 44445556788888888888854 345455667888888888877654
No 452
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=23.63 E-value=81 Score=25.45 Aligned_cols=45 Identities=13% Similarity=0.062 Sum_probs=23.7
Q ss_pred CcccCchhhhCCccCcEEecccCcCCccCCccccCCCCCCeeeCcC
Q 041467 30 FNGEIPHQIGRLISLERLILSNNSFSCAIPANLSSGSNLIKLSTDS 75 (746)
Q Consensus 30 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~ 75 (746)
++.+-..+|.++++|+.+.|-.+ ++.+-...|.++.+|+.+.+..
T Consensus 8 vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 8 VVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred cCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 34344455666666666666543 2323344566666666665543
Done!