BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>041475
MYGEQSHMRIAILMYLPNITKRHTFCSYKFSELPFLLYISLFEFIYCTLFSFRNGIGRST
WTAKQNKLFENALAIYDKDTPDRWHNLARAVGGKTVEEVKRHYEMLAEDVSRIEAGEIPL
PDYKKIGGTNKAHSYINMDNEEQRLKTLRLSEA

High Scoring Gene Products

Symbol, full name Information P value
RL6
RAD-like 6
protein from Arabidopsis thaliana 1.4e-25
MEE3
AT2G21650
protein from Arabidopsis thaliana 5.9e-25
RL1
AT4G39250
protein from Arabidopsis thaliana 2.6e-24
RAD
Transcription factor RADIALIS
protein from Antirrhinum majus 5.3e-24
RL5
AT1G19510
protein from Arabidopsis thaliana 7.8e-23
RL3
AT4G36570
protein from Arabidopsis thaliana 2.1e-22
RL4
RAD-like 4
protein from Arabidopsis thaliana 9.2e-20
AT2G38090 protein from Arabidopsis thaliana 3.2e-17
AT5G58900 protein from Arabidopsis thaliana 4.1e-17
DIVARICATA
Transcription factor DIVARICATA
protein from Antirrhinum majus 1.8e-16
AT3G11280 protein from Arabidopsis thaliana 2.9e-16
AT5G05790 protein from Arabidopsis thaliana 9.8e-16
AT5G08520 protein from Arabidopsis thaliana 2.9e-13
AT5G01200 protein from Arabidopsis thaliana 4.4e-13
AT1G49010 protein from Arabidopsis thaliana 1.4e-12
AT5G23650 protein from Arabidopsis thaliana 2.3e-11
AT5G04760 protein from Arabidopsis thaliana 4.5e-11
Dnajc2
DnaJ (Hsp40) homolog, subfamily C, member 2
protein from Mus musculus 7.2e-07
Dnajc2
DnaJ (Hsp40) homolog, subfamily C, member 2
gene from Rattus norvegicus 1.2e-06
AT5G47290 protein from Arabidopsis thaliana 1.3e-06
I3LNQ0
Uncharacterized protein
protein from Sus scrofa 1.9e-06
I3LSN5
Uncharacterized protein
protein from Sus scrofa 1.9e-06
dnajc2
DnaJ homolog subfamily C member 2
protein from Xenopus (Silurana) tropicalis 2.5e-06
DNAJC2
DnaJ homolog subfamily C member 2
protein from Bos taurus 2.5e-06
DNAJC2
DnaJ homolog subfamily C member 2
protein from Homo sapiens 2.5e-06
DNAJC2
Uncharacterized protein
protein from Sus scrofa 2.5e-06
DNAJC2
DnaJ homolog subfamily C member 2
protein from Macaca fascicularis 2.5e-06
DNAJC2
Uncharacterized protein
protein from Canis lupus familiaris 2.5e-06
DNAJC2
Uncharacterized protein
protein from Gallus gallus 3.2e-06
dnajc1
DnaJ (Hsp40) homolog, subfamily C, member 1
gene_product from Danio rerio 3.2e-06
DNAJC1
Uncharacterized protein
protein from Gallus gallus 3.9e-06
AT4G09450 protein from Arabidopsis thaliana 0.00015
AT3G10580 protein from Arabidopsis thaliana 0.00017
Dnajc1
DnaJ (Hsp40) homolog, subfamily C, member 1
gene from Rattus norvegicus 0.00056
AT3G10595 protein from Arabidopsis thaliana 0.00091
F54F2.9 gene from Caenorhabditis elegans 0.00096
F54F2.9
Uncharacterized protein F54F2.9
protein from Caenorhabditis elegans 0.00096

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  041475
        (153 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2025182 - symbol:RL6 "RAD-like 6" species:3702...   290  1.4e-25   1
TAIR|locus:2049374 - symbol:MEE3 "MATERNAL EFFECT EMBRYO ...   284  5.9e-25   1
TAIR|locus:2136283 - symbol:RL1 "RAD-like 1" species:3702...   278  2.6e-24   1
UNIPROTKB|Q58FS3 - symbol:RAD "Transcription factor RADIA...   275  5.3e-24   1
TAIR|locus:2016417 - symbol:RL5 "RAD-like 5" species:3702...   264  7.8e-23   1
TAIR|locus:2115260 - symbol:RL3 "RAD-like 3" species:3702...   260  2.1e-22   1
TAIR|locus:4010713631 - symbol:RL4 "RAD-like 4" species:3...   235  9.2e-20   1
TAIR|locus:2042872 - symbol:AT2G38090 species:3702 "Arabi...   211  3.2e-17   1
TAIR|locus:2154508 - symbol:AT5G58900 species:3702 "Arabi...   210  4.1e-17   1
UNIPROTKB|Q8S9H7 - symbol:DIVARICATA "Transcription facto...   204  1.8e-16   1
TAIR|locus:2074723 - symbol:AT3G11280 species:3702 "Arabi...   202  2.9e-16   1
TAIR|locus:2166459 - symbol:AT5G05790 species:3702 "Arabi...   197  9.8e-16   1
TAIR|locus:2159607 - symbol:AT5G08520 species:3702 "Arabi...   176  2.9e-13   1
TAIR|locus:2150149 - symbol:AT5G01200 species:3702 "Arabi...   172  4.4e-13   1
TAIR|locus:2028461 - symbol:AT1G49010 species:3702 "Arabi...   171  1.4e-12   1
TAIR|locus:2171711 - symbol:AT5G23650 species:3702 "Arabi...   161  2.3e-11   1
TAIR|locus:2175478 - symbol:AT5G04760 species:3702 "Arabi...   153  4.5e-11   1
MGI|MGI:99470 - symbol:Dnajc2 "DnaJ (Hsp40) homolog, subf...   124  7.2e-07   1
RGD|620524 - symbol:Dnajc2 "DnaJ (Hsp40) homolog, subfami...   122  1.2e-06   1
TAIR|locus:2171494 - symbol:AT5G47290 "AT5G47290" species...   111  1.3e-06   1
UNIPROTKB|I3LNQ0 - symbol:I3LNQ0 "Uncharacterized protein...   119  1.9e-06   1
UNIPROTKB|I3LSN5 - symbol:I3LSN5 "Uncharacterized protein...   119  1.9e-06   1
UNIPROTKB|Q6P2Y3 - symbol:dnajc2 "DnaJ homolog subfamily ...   119  2.5e-06   1
UNIPROTKB|Q1RMH9 - symbol:DNAJC2 "DnaJ homolog subfamily ...   119  2.5e-06   1
UNIPROTKB|Q99543 - symbol:DNAJC2 "DnaJ homolog subfamily ...   119  2.5e-06   1
UNIPROTKB|F1SB54 - symbol:DNAJC2 "Uncharacterized protein...   119  2.5e-06   1
UNIPROTKB|Q4R8H2 - symbol:DNAJC2 "DnaJ homolog subfamily ...   119  2.5e-06   1
UNIPROTKB|E2RS54 - symbol:DNAJC2 "Uncharacterized protein...   119  2.5e-06   1
UNIPROTKB|F1P3V8 - symbol:DNAJC2 "Uncharacterized protein...   118  3.2e-06   1
ZFIN|ZDB-GENE-061103-529 - symbol:dnajc1 "DnaJ (Hsp40) ho...   117  3.2e-06   1
UNIPROTKB|F1NUR7 - symbol:DNAJC1 "Uncharacterized protein...   116  3.9e-06   1
TAIR|locus:2133667 - symbol:AT4G09450 species:3702 "Arabi...   104  0.00015   1
TAIR|locus:2075775 - symbol:AT3G10580 species:3702 "Arabi...   106  0.00017   1
RGD|2322144 - symbol:Dnajc1 "DnaJ (Hsp40) homolog, subfam...   105  0.00056   1
TAIR|locus:504955890 - symbol:AT3G10595 species:3702 "Ara...    98  0.00091   1
WB|WBGene00018836 - symbol:F54F2.9 species:6239 "Caenorha...   103  0.00096   1
UNIPROTKB|P34454 - symbol:F54F2.9 "Uncharacterized protei...   103  0.00096   1


>TAIR|locus:2025182 [details] [associations]
            symbol:RL6 "RAD-like 6" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=ISM] [GO:0009507 "chloroplast" evidence=ISM]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=ISS] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=TAS] InterPro:IPR001005 InterPro:IPR009057
            SMART:SM00717 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
            GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 GO:GO:0003682
            SUPFAM:SSF46689 PROSITE:PS51293 EMBL:AC025814 HOGENOM:HOG000238103
            EMBL:AY519525 EMBL:DQ395346 EMBL:BT026091 IPI:IPI00526625
            IPI:IPI00775691 PIR:H96782 RefSeq:NP_001077825.1 RefSeq:NP_177661.1
            UniGene:At.64902 ProteinModelPortal:Q1A173 SMR:Q1A173
            EnsemblPlants:AT1G75250.2 GeneID:843862 KEGG:ath:AT1G75250
            TAIR:At1g75250 eggNOG:NOG253755 InParanoid:Q9FRL6 OMA:PLPNYKT
            ProtClustDB:CLSN2682492 ArrayExpress:Q1A173 Genevestigator:Q1A173
            Uniprot:Q1A173
        Length = 97

 Score = 290 (107.1 bits), Expect = 1.4e-25, P = 1.4e-25
 Identities = 53/92 (57%), Positives = 71/92 (77%)

Query:    59 STWTAKQNKLFENALAIYDKDTPDRWHNLARAVGGKTVEEVKRHYEMLAEDVSRIEAGEI 118
             S WT  QNK+FE ALA+YDKDTPDRWHN+A+AVGGKTVEEVKRHY++L ED+  IE G +
Sbjct:    10 SPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVEDLINIETGRV 69

Query:   119 PLPDYKKIGGTNKAHSYINMDNEEQRLKTLRL 150
             PLP+YK     +++   IN D + +++K L++
Sbjct:    70 PLPNYKTFESNSRS---IN-DFDTRKMKNLKI 97


>TAIR|locus:2049374 [details] [associations]
            symbol:MEE3 "MATERNAL EFFECT EMBRYO ARREST 3"
            species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
            evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] [GO:0005634 "nucleus"
            evidence=ISM] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=ISS] [GO:0009793 "embryo development ending
            in seed dormancy" evidence=IMP] [GO:0009630 "gravitropism"
            evidence=IMP] [GO:0010114 "response to red light" evidence=IMP]
            InterPro:IPR001005 InterPro:IPR009057 SMART:SM00717 GO:GO:0005634
            EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
            GO:GO:0006351 GO:GO:0003682 GO:GO:0010114 GO:GO:0009630
            GO:GO:0009793 SUPFAM:SSF46689 PROSITE:PS51293 InterPro:IPR017877
            EMBL:AC007119 HOGENOM:HOG000238103 EMBL:AY519526 EMBL:BT008554
            EMBL:BT008698 EMBL:AK229516 IPI:IPI00543218 PIR:G84603
            RefSeq:NP_179759.1 UniGene:At.43298 ProteinModelPortal:Q9SIJ5
            SMR:Q9SIJ5 IntAct:Q9SIJ5 PRIDE:Q9SIJ5 EnsemblPlants:AT2G21650.1
            GeneID:816703 KEGG:ath:AT2G21650 TAIR:At2g21650 eggNOG:NOG308303
            InParanoid:Q9SIJ5 OMA:KHIESGH PhylomeDB:Q9SIJ5
            ProtClustDB:CLSN2683609 Genevestigator:Q9SIJ5 Uniprot:Q9SIJ5
        Length = 101

 Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
 Identities = 51/95 (53%), Positives = 69/95 (72%)

Query:    57 GRSTWTAKQNKLFENALAIYDKDTPDRWHNLARAVGGKTVEEVKRHYEMLAEDVSRIEAG 116
             G  +WT KQNK FE ALA+YD+DTPDRWHN+ARAVGGKT EE KR Y++L  D+  IE G
Sbjct:    10 GSGSWTVKQNKAFERALAVYDQDTPDRWHNVARAVGGKTPEEAKRQYDLLVRDIESIENG 69

Query:   117 EIPLPDYKKI-GGTNKAHSYINMDNEEQRLKTLRL 150
              +P PDYK   G +N+      + +EE+R+++++L
Sbjct:    70 HVPFPDYKTTTGNSNRGR----LRDEEKRMRSMKL 100


>TAIR|locus:2136283 [details] [associations]
            symbol:RL1 "RAD-like 1" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=ISS]
            InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
            GO:GO:0005634 EMBL:CP002687 GO:GO:0003677 GO:GO:0003700
            GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
            InterPro:IPR017884 PROSITE:PS51293 EMBL:AL161594 EMBL:AL050351
            EMBL:AY519527 EMBL:BT024650 EMBL:DQ375231 IPI:IPI00518965
            PIR:T08573 RefSeq:NP_195636.2 UniGene:At.64218
            ProteinModelPortal:F4JVB8 SMR:F4JVB8 EnsemblPlants:AT4G39250.1
            GeneID:830081 KEGG:ath:AT4G39250 TAIR:At4g39250 eggNOG:NOG329125
            HOGENOM:HOG000238103 InParanoid:Q0NZY1 OMA:RHYEILV Uniprot:F4JVB8
        Length = 100

 Score = 278 (102.9 bits), Expect = 2.6e-24, P = 2.6e-24
 Identities = 49/91 (53%), Positives = 66/91 (72%)

Query:    60 TWTAKQNKLFENALAIYDKDTPDRWHNLARAVGGKTVEEVKRHYEMLAEDVSRIEAGEIP 119
             +WTAKQNK FE ALA YD+DTP+RW N+A+ VGGKT EEVKRHYE+L +D++ IE G +P
Sbjct:    13 SWTAKQNKAFEQALATYDQDTPNRWQNVAKVVGGKTTEEVKRHYELLVQDINSIENGHVP 72

Query:   120 LPDYKKIGGTNKAHSYINMDNEEQRLKTLRL 150
              P+Y+  GG         +  EE+R++ +RL
Sbjct:    73 FPNYRTSGGCTNGR----LSQEEKRMRNMRL 99


>UNIPROTKB|Q58FS3 [details] [associations]
            symbol:RAD "Transcription factor RADIALIS" species:4151
            "Antirrhinum majus" [GO:0009908 "flower development" evidence=IMP]
            [GO:0048262 "determination of dorsal/ventral asymmetry"
            evidence=IMP] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
            SMART:SM00717 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
            GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
            InterPro:IPR017884 PROSITE:PS51293 GO:GO:0009908 GO:GO:0048262
            EMBL:AY954971 PDB:2CJJ PDBsum:2CJJ ProteinModelPortal:Q58FS3
            SMR:Q58FS3 EvolutionaryTrace:Q58FS3 Uniprot:Q58FS3
        Length = 93

 Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
 Identities = 52/96 (54%), Positives = 70/96 (72%)

Query:    55 GIGRSTWTAKQNKLFENALAIYDKDTPDRWHNLARAVGGKTVEEVKRHYEMLAEDVSRIE 114
             G GR  W+AK+NK FE ALA+YDKDTPDRW N+ARAV G+T EEVK+HYE+L ED+  IE
Sbjct:     6 GSGRP-WSAKENKAFERALAVYDKDTPDRWANVARAVEGRTPEEVKKHYEILVEDIKYIE 64

Query:   115 AGEIPLPDYKKIGGTNKAHSYINMDNEEQRLKTLRL 150
             +G++P P+Y+  GG        NM  +E+R + L++
Sbjct:    65 SGKVPFPNYRTTGG--------NMKTDEKRFRNLKI 92


>TAIR|locus:2016417 [details] [associations]
            symbol:RL5 "RAD-like 5" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=ISS] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=ISS] InterPro:IPR001005 InterPro:IPR009057
            SMART:SM00717 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
            GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 GO:GO:0003682
            SUPFAM:SSF46689 PROSITE:PS51293 InterPro:IPR017877 EMBL:AC025808
            HOGENOM:HOG000238103 EMBL:AY519524 EMBL:DQ395347 EMBL:AK119034
            EMBL:BT005657 IPI:IPI00517217 IPI:IPI00526097 RefSeq:NP_564087.2
            UniGene:At.41742 ProteinModelPortal:Q8GW75 SMR:Q8GW75
            EnsemblPlants:AT1G19510.1 GeneID:838537 KEGG:ath:AT1G19510
            TAIR:At1g19510 eggNOG:NOG289750 InParanoid:Q8GW75 OMA:HFEQLVH
            PhylomeDB:Q8GW75 Genevestigator:Q8GW75 Uniprot:Q8GW75
        Length = 100

 Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
 Identities = 50/93 (53%), Positives = 69/93 (74%)

Query:    59 STWTAKQNKLFENALAIYDKDTPDRWHNLARAVGGKTVEEVKRHYEMLAEDVSRIEAGEI 118
             S+WT+KQNK+FE ALA+YDKDTPDRW N+A+AVG K+ EEVKRHY++L ED+  IE   +
Sbjct:    10 SSWTSKQNKMFERALAVYDKDTPDRWQNVAKAVGSKSAEEVKRHYDILVEDLMNIEQDLV 69

Query:   119 PLPDYKKIGGTNKAHSYINMDNEEQRL-KTLRL 150
             PLP YK +   +K+     +D+ + RL K +R+
Sbjct:    70 PLPKYKTVDVGSKSRG---IDDFDLRLMKNMRI 99


>TAIR|locus:2115260 [details] [associations]
            symbol:RL3 "RAD-like 3" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=ISS] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=ISS] InterPro:IPR001005 InterPro:IPR009057
            Pfam:PF00249 SMART:SM00717 GO:GO:0005634 EMBL:CP002687
            GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
            GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
            PROSITE:PS51293 EMBL:AL161589 eggNOG:KOG0724 EMBL:Z99708
            EMBL:BT010770 EMBL:BT011255 IPI:IPI00524086 IPI:IPI00944270
            PIR:G85431 RefSeq:NP_195375.4 UniGene:At.47987
            ProteinModelPortal:Q6NNN0 SMR:Q6NNN0 IntAct:Q6NNN0 PRIDE:Q6NNN0
            GeneID:829809 KEGG:ath:AT4G36570 TAIR:At4g36570 PhylomeDB:Q6NNN0
            Genevestigator:Q6NNN0 Uniprot:Q6NNN0
        Length = 81

 Score = 260 (96.6 bits), Expect = 2.1e-22, P = 2.1e-22
 Identities = 45/72 (62%), Positives = 58/72 (80%)

Query:    59 STWTAKQNKLFENALAIYDKDTPDRWHNLARAVGGKTVEEVKRHYEMLAEDVSRIEAGEI 118
             ++WT K+NKLFE ALA YD+DTPDRWHN+ARAVGGK+ EEV+RHYE+L  DV+ IE+G  
Sbjct:    10 ASWTRKENKLFERALATYDQDTPDRWHNVARAVGGKSAEEVRRHYELLIRDVNDIESGRY 69

Query:   119 PLPDYKKIGGTN 130
             P P+Y+  G  +
Sbjct:    70 PHPNYRSNGNNH 81


>TAIR|locus:4010713631 [details] [associations]
            symbol:RL4 "RAD-like 4" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=ISM] InterPro:IPR001005 InterPro:IPR009057
            Pfam:PF00249 SMART:SM00717 GO:GO:0005634 EMBL:CP002685
            GenomeReviews:CT485783_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
            GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
            PROSITE:PS51293 EMBL:AC006439 EMBL:DQ487660 EMBL:DQ652756
            EMBL:DQ395345 IPI:IPI00846254 RefSeq:NP_001077912.1
            UniGene:At.49279 ProteinModelPortal:Q1G3C4 SMR:Q1G3C4 PRIDE:Q1G3C4
            EnsemblPlants:AT2G18328.1 GeneID:5007884 KEGG:ath:AT2G18328
            TAIR:At2g18328 eggNOG:NOG285168 OMA:EEDVGHI PhylomeDB:Q1G3C4
            ProtClustDB:CLSN2920147 Genevestigator:Q1G3C4 Uniprot:Q1G3C4
        Length = 77

 Score = 235 (87.8 bits), Expect = 9.2e-20, P = 9.2e-20
 Identities = 42/71 (59%), Positives = 55/71 (77%)

Query:    54 NGIGRSTWTAKQNKLFENALAIYDKDTPDRWHNLARAVGGKTVEEVKRHYEMLAEDVSRI 113
             + +  S+WTA+++K FE ALA +DKDTPDRW  +ARAVGGK+ EEVKRHYE+L  DV+ I
Sbjct:     4 SSMSTSSWTAREDKQFEMALAKFDKDTPDRWQKIARAVGGKSTEEVKRHYELLLRDVNDI 63

Query:   114 EAGEIPLPDYK 124
             E+G  P P Y+
Sbjct:    64 ESGRYPQPRYR 74


>TAIR|locus:2042872 [details] [associations]
            symbol:AT2G38090 species:3702 "Arabidopsis thaliana"
            [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
            evidence=ISM] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=TAS]
            InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
            GO:GO:0005634 EMBL:CP002685 GO:GO:0003677 GO:GO:0003700
            GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
            PROSITE:PS51293 InterPro:IPR017930 InterPro:IPR006447
            TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:BT006122 EMBL:AY519529
            EMBL:AK118135 IPI:IPI00542058 RefSeq:NP_181344.2 UniGene:At.46819
            ProteinModelPortal:Q8GXN7 SMR:Q8GXN7 EnsemblPlants:AT2G38090.1
            GeneID:818387 KEGG:ath:AT2G38090 TAIR:At2g38090
            HOGENOM:HOG000237920 InParanoid:Q8GXN7 OMA:HRQFLMG PhylomeDB:Q8GXN7
            ProtClustDB:CLSN2918198 Genevestigator:Q8GXN7 Uniprot:Q8GXN7
        Length = 298

 Score = 211 (79.3 bits), Expect = 3.2e-17, P = 3.2e-17
 Identities = 42/67 (62%), Positives = 49/67 (73%)

Query:    58 RST-WTAKQNKLFENALAIYDKDTPDRWHNLARAVGGKTVEEVKRHYEMLAEDVSRIEAG 116
             R T WTA++NK FENALA YDKDTPDRW  +A  + GKTV +V + Y  L EDVS IEAG
Sbjct:    25 RGTKWTAEENKKFENALAFYDKDTPDRWSRVAAMLPGKTVGDVIKQYRELEEDVSDIEAG 84

Query:   117 EIPLPDY 123
              IP+P Y
Sbjct:    85 LIPIPGY 91


>TAIR|locus:2154508 [details] [associations]
            symbol:AT5G58900 species:3702 "Arabidopsis thaliana"
            [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
            evidence=ISM] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] InterPro:IPR001005
            InterPro:IPR009057 Pfam:PF00249 SMART:SM00717 GO:GO:0005634
            EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
            GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
            PROSITE:PS51293 InterPro:IPR017930 InterPro:IPR006447
            TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AB016885
            HOGENOM:HOG000237920 EMBL:BT005473 EMBL:AY519533 EMBL:AK118891
            IPI:IPI00547099 RefSeq:NP_200698.1 UniGene:At.7757
            ProteinModelPortal:Q9FIL9 SMR:Q9FIL9 DNASU:836007
            EnsemblPlants:AT5G58900.1 GeneID:836007 KEGG:ath:AT5G58900
            TAIR:At5g58900 eggNOG:NOG325121 InParanoid:Q9FIL9 OMA:PFTLDWA
            PhylomeDB:Q9FIL9 ProtClustDB:CLSN2914846 ArrayExpress:Q9FIL9
            Genevestigator:Q9FIL9 Uniprot:Q9FIL9
        Length = 288

 Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
 Identities = 41/70 (58%), Positives = 50/70 (71%)

Query:    54 NGIGRSTWTAKQNKLFENALAIYDKDTPDRWHNLARAVGGKTVEEVKRHYEMLAEDVSRI 113
             +G G +TWTA +NK FENALA+YD +TPDRW  +A  + GKTV +V R Y  L  DVS I
Sbjct:    28 SGEG-ATWTAAENKAFENALAVYDDNTPDRWQKVAAVIPGKTVSDVIRQYNDLEADVSSI 86

Query:   114 EAGEIPLPDY 123
             EAG IP+P Y
Sbjct:    87 EAGLIPVPGY 96


>UNIPROTKB|Q8S9H7 [details] [associations]
            symbol:DIVARICATA "Transcription factor DIVARICATA"
            species:4151 "Antirrhinum majus" [GO:0009908 "flower development"
            evidence=IMP] [GO:0048262 "determination of dorsal/ventral
            asymmetry" evidence=IMP] InterPro:IPR001005 InterPro:IPR009057
            Pfam:PF00249 SMART:SM00717 GO:GO:0005634 GO:GO:0006355
            GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 Gene3D:1.10.10.60
            SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0009908
            InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
            PROSITE:PS51294 GO:GO:0048262 EMBL:AY077453
            ProteinModelPortal:Q8S9H7 Uniprot:Q8S9H7
        Length = 307

 Score = 204 (76.9 bits), Expect = 1.8e-16, P = 1.8e-16
 Identities = 39/68 (57%), Positives = 51/68 (75%)

Query:    58 RST--WTAKQNKLFENALAIYDKDTPDRWHNLARAVGGKTVEEVKRHYEMLAEDVSRIEA 115
             RST  WTA +NK FENALA++D++TP+RW  +A  V GKTV +V R Y+ L +DVS IEA
Sbjct:    21 RSTTRWTAAENKAFENALAVFDENTPNRWERVAERVPGKTVGDVMRQYKELEDDVSSIEA 80

Query:   116 GEIPLPDY 123
             G +P+P Y
Sbjct:    81 GFVPVPGY 88


>TAIR|locus:2074723 [details] [associations]
            symbol:AT3G11280 species:3702 "Arabidopsis thaliana"
            [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
            evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=TAS]
            [GO:0009751 "response to salicylic acid stimulus" evidence=IEP]
            [GO:0009739 "response to gibberellin stimulus" evidence=IEP]
            [GO:0019344 "cysteine biosynthetic process" evidence=RCA]
            InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
            GO:GO:0005634 EMBL:CP002686 GO:GO:0003677 GO:GO:0003700
            GO:GO:0003682 GO:GO:0009751 Gene3D:1.10.10.60 SUPFAM:SSF46689
            GO:GO:0009739 InterPro:IPR017884 PROSITE:PS51293 EMBL:AC073395
            InterPro:IPR017930 InterPro:IPR006447 TIGRFAMs:TIGR01557
            PROSITE:PS51294 UniGene:At.23548 EMBL:AY056180 EMBL:AY091265
            EMBL:AY550308 IPI:IPI00541857 RefSeq:NP_187737.1 RefSeq:NP_850558.1
            ProteinModelPortal:Q9C773 SMR:Q9C773 STRING:Q9C773 PRIDE:Q9C773
            DNASU:820299 EnsemblPlants:AT3G11280.1 EnsemblPlants:AT3G11280.2
            GeneID:820299 KEGG:ath:AT3G11280 TAIR:At3g11280 InParanoid:Q9C773
            OMA:FEAAINF PhylomeDB:Q9C773 ProtClustDB:CLSN2684400
            ArrayExpress:Q9C773 Genevestigator:Q9C773 Uniprot:Q9C773
        Length = 263

 Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
 Identities = 43/96 (44%), Positives = 58/96 (60%)

Query:    28 YKFSELPFLLYISLFEFIYCTLFSFRNGIGRSTWTAKQNKLFENALAIYDKDTPDRWHNL 87
             + FS LP    IS   F+   + S  +    S WT ++NK+FE ALAIY +D+PDRW  +
Sbjct:     5 HPFSHLP----ISDHRFVVQEMVSLHSSSSGS-WTKEENKMFERALAIYAEDSPDRWFKV 59

Query:    88 ARAVGGKTVEEVKRHYEMLAEDVSRIEAGEIPLPDY 123
             A  + GKTV +V + Y  L EDV  IEAG +P+P Y
Sbjct:    60 ASMIPGKTVFDVMKQYSKLEEDVFDIEAGRVPIPGY 95


>TAIR|locus:2166459 [details] [associations]
            symbol:AT5G05790 species:3702 "Arabidopsis thaliana"
            [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
            evidence=ISM] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=TAS]
            InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
            GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
            GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
            InterPro:IPR017884 PROSITE:PS51293 InterPro:IPR017930
            InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AB005237
            HOGENOM:HOG000237920 ProtClustDB:CLSN2684400 EMBL:AY519531
            EMBL:BT026054 IPI:IPI00544524 RefSeq:NP_196198.1 UniGene:At.32952
            ProteinModelPortal:Q9FFJ9 SMR:Q9FFJ9 EnsemblPlants:AT5G05790.1
            GeneID:830464 KEGG:ath:AT5G05790 TAIR:At5g05790 eggNOG:NOG242423
            InParanoid:Q9FFJ9 OMA:ISRNFVG PhylomeDB:Q9FFJ9 ArrayExpress:Q9FFJ9
            Genevestigator:Q9FFJ9 Uniprot:Q9FFJ9
        Length = 277

 Score = 197 (74.4 bits), Expect = 9.8e-16, P = 9.8e-16
 Identities = 34/68 (50%), Positives = 47/68 (69%)

Query:    59 STWTAKQNKLFENALAIYDKDTPDRWHNLARAVGGKTVEEVKRHYEMLAEDVSRIEAGEI 118
             S+WT ++NK FE ALA+Y  DTPDRW  +A  + GKT+ +V R Y  L ED+  IEAG +
Sbjct:    29 SSWTKEENKKFERALAVYADDTPDRWFKVAAMIPGKTISDVMRQYSKLEEDLFDIEAGLV 88

Query:   119 PLPDYKKI 126
             P+P Y+ +
Sbjct:    89 PIPGYRSV 96


>TAIR|locus:2159607 [details] [associations]
            symbol:AT5G08520 species:3702 "Arabidopsis thaliana"
            [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
            evidence=ISM] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=TAS]
            InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
            GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
            GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
            InterPro:IPR017884 PROSITE:PS51293 InterPro:IPR017930
            InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AB006697
            HOGENOM:HOG000237920 EMBL:AY072090 EMBL:AY096571 EMBL:AY519532
            IPI:IPI00516280 RefSeq:NP_196469.1 UniGene:At.8762
            ProteinModelPortal:Q9FNN6 SMR:Q9FNN6 STRING:Q9FNN6 PaxDb:Q9FNN6
            PRIDE:Q9FNN6 EnsemblPlants:AT5G08520.1 GeneID:830751
            KEGG:ath:AT5G08520 TAIR:At5g08520 eggNOG:NOG259915
            InParanoid:Q9FNN6 OMA:NSMNRER PhylomeDB:Q9FNN6
            ProtClustDB:CLSN2687300 ArrayExpress:Q9FNN6 Genevestigator:Q9FNN6
            Uniprot:Q9FNN6
        Length = 298

 Score = 176 (67.0 bits), Expect = 2.9e-13, P = 2.9e-13
 Identities = 33/72 (45%), Positives = 48/72 (66%)

Query:    59 STWTAKQNKLFENALAIYDKDTPDRWHNLARAVGGKTVEEVKRHYEMLAEDVSRIEAGEI 118
             S W+ + +  FE ALA    ++ +RW  +A  V GK+VE++K HYE+L EDV+RIE+G +
Sbjct:    10 SVWSREDDIAFERALANNTDESEERWEKIAADVPGKSVEQIKEHYELLVEDVTRIESGCV 69

Query:   119 PLPDYKKIGGTN 130
             PLP Y    G+N
Sbjct:    70 PLPAYGSPEGSN 81


>TAIR|locus:2150149 [details] [associations]
            symbol:AT5G01200 species:3702 "Arabidopsis thaliana"
            [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=ISS]
            InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
            GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
            GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
            InterPro:IPR017884 PROSITE:PS51293 InterPro:IPR017930
            InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AL137189
            HOGENOM:HOG000237920 EMBL:AY519530 IPI:IPI00517812 PIR:T45960
            RefSeq:NP_195740.1 UniGene:At.27639 ProteinModelPortal:Q9LFB6
            SMR:Q9LFB6 EnsemblPlants:AT5G01200.1 GeneID:831676
            KEGG:ath:AT5G01200 TAIR:At5g01200 eggNOG:NOG260690
            InParanoid:Q9LFB6 OMA:SAANSDY PhylomeDB:Q9LFB6
            ProtClustDB:CLSN2916637 ArrayExpress:Q9LFB6 Genevestigator:Q9LFB6
            Uniprot:Q9LFB6
        Length = 267

 Score = 172 (65.6 bits), Expect = 4.4e-13, P = 4.4e-13
 Identities = 40/85 (47%), Positives = 53/85 (62%)

Query:    56 IGRSTWTAKQNKLFENALA-IYDKDTPDRWHNLARAVGGKTVEEVKRHYEMLAEDVSRIE 114
             +  +TWTA++NK FE ALA + DKD  + W  +A  + GKTV +V + Y+ L +DVS IE
Sbjct:    25 VREATWTAEENKRFEKALAYLDDKDNLESWSKIADLIPGKTVADVIKRYKELEDDVSDIE 84

Query:   115 AGEIPLPDYKKIGGTNKAHSYINMD 139
             AG IP+P Y   GG   A S  N D
Sbjct:    85 AGLIPIPGY---GGD--ASSAANSD 104


>TAIR|locus:2028461 [details] [associations]
            symbol:AT1G49010 species:3702 "Arabidopsis thaliana"
            [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
            evidence=ISM] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] [GO:0009651 "response
            to salt stress" evidence=IEP] [GO:0009733 "response to auxin
            stimulus" evidence=IEP] [GO:0009739 "response to gibberellin
            stimulus" evidence=IEP] [GO:0009751 "response to salicylic acid
            stimulus" evidence=IEP] [GO:0009753 "response to jasmonic acid
            stimulus" evidence=IEP] [GO:0046686 "response to cadmium ion"
            evidence=IEP] [GO:0016556 "mRNA modification" evidence=RCA]
            InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0046686
            GO:GO:0009733 GO:GO:0009753 GO:GO:0003677 GO:GO:0009651
            GO:GO:0003700 GO:GO:0003682 GO:GO:0009751 Gene3D:1.10.10.60
            SUPFAM:SSF46689 GO:GO:0009739 EMBL:AC016041 InterPro:IPR017884
            PROSITE:PS51293 InterPro:IPR017930 InterPro:IPR006447
            TIGRFAMs:TIGR01557 PROSITE:PS51294 HOGENOM:HOG000237920
            EMBL:AY086906 EMBL:AY519528 EMBL:BT024862 IPI:IPI00544296
            PIR:F96527 RefSeq:NP_564537.1 UniGene:At.38318
            ProteinModelPortal:Q9M9A3 SMR:Q9M9A3 STRING:Q9M9A3 PRIDE:Q9M9A3
            EnsemblPlants:AT1G49010.1 GeneID:841324 KEGG:ath:AT1G49010
            TAIR:At1g49010 eggNOG:NOG253185 InParanoid:Q9M9A3 OMA:YVVPVAY
            PhylomeDB:Q9M9A3 ProtClustDB:CLSN2688585 ArrayExpress:Q9M9A3
            Genevestigator:Q9M9A3 Uniprot:Q9M9A3
        Length = 314

 Score = 171 (65.3 bits), Expect = 1.4e-12, P = 1.4e-12
 Identities = 30/68 (44%), Positives = 49/68 (72%)

Query:    59 STWTAKQNKLFENALAIY---DKDTPDRWHNLARAVGGKTVEEVKRHYEMLAEDVSRIEA 115
             +TW+ ++ K FENA+A++   ++ T D+W+ ++  V  K +EEVK+HY++L EDV  IE 
Sbjct:     6 ATWSREEEKAFENAIALHCVEEEITEDQWNKMSSMVPSKALEEVKKHYQILLEDVKAIEN 65

Query:   116 GEIPLPDY 123
             G++PLP Y
Sbjct:    66 GQVPLPRY 73


>TAIR|locus:2171711 [details] [associations]
            symbol:AT5G23650 species:3702 "Arabidopsis thaliana"
            [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
            evidence=ISM] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=TAS]
            InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
            GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
            GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
            InterPro:IPR017884 PROSITE:PS51293 InterPro:IPR017930
            InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AB025633
            HOGENOM:HOG000237920 EMBL:DQ056685 IPI:IPI00534696
            RefSeq:NP_197754.1 UniGene:At.54959 ProteinModelPortal:Q9LT00
            SMR:Q9LT00 EnsemblPlants:AT5G23650.1 GeneID:832430
            KEGG:ath:AT5G23650 TAIR:At5g23650 eggNOG:NOG311780
            InParanoid:Q9LT00 OMA:HYNILAR PhylomeDB:Q9LT00
            ProtClustDB:CLSN2914851 Genevestigator:Q9LT00 Uniprot:Q9LT00
        Length = 337

 Score = 161 (61.7 bits), Expect = 2.3e-11, P = 2.3e-11
 Identities = 32/65 (49%), Positives = 42/65 (64%)

Query:    59 STWTAKQNKLFENALAIYDKDTPDRWHNLARAVGGKTVEEVKRHYEMLAEDVSRIEAGEI 118
             S+W+   +  FE ALAIY+  T  RW  +A  V GKT+E+V  HY +LA DV  IE+G +
Sbjct:    11 SSWSKDDDIAFEKALAIYNDKTEIRWKKIATVVPGKTLEQVIEHYNILARDVMLIESGCV 70

Query:   119 PLPDY 123
              LPDY
Sbjct:    71 RLPDY 75


>TAIR|locus:2175478 [details] [associations]
            symbol:AT5G04760 species:3702 "Arabidopsis thaliana"
            [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
            evidence=ISM] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=TAS]
            [GO:0010286 "heat acclimation" evidence=RCA] InterPro:IPR001005
            InterPro:IPR009057 Pfam:PF00249 SMART:SM00717 EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0003682
            Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017930
            InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AL162972
            EMBL:AB008271 UniGene:At.20111 UniGene:At.68528
            HOGENOM:HOG000237920 EMBL:AY050976 EMBL:AY091177 EMBL:AY088362
            EMBL:AB493736 IPI:IPI00530948 PIR:T48472 RefSeq:NP_196096.1
            ProteinModelPortal:Q9LZ21 SMR:Q9LZ21 IntAct:Q9LZ21
            EnsemblPlants:AT5G04760.1 GeneID:830354 KEGG:ath:AT5G04760
            TAIR:At5g04760 eggNOG:NOG276102 InParanoid:Q9LZ21 OMA:WRNISRW
            PhylomeDB:Q9LZ21 ProtClustDB:CLSN2686445 ArrayExpress:Q9LZ21
            Genevestigator:Q9LZ21 Uniprot:Q9LZ21
        Length = 215

 Score = 153 (58.9 bits), Expect = 4.5e-11, P = 4.5e-11
 Identities = 26/65 (40%), Positives = 43/65 (66%)

Query:    59 STWTAKQNKLFENALAIYDKDTPDRWHNLARAVGGKTVEEVKRHYEMLAEDVSRIEAGEI 118
             S WT  ++K+FE AL ++ + +P+RW  +A  +  K+  EV+ HYE+L  DV  I++G +
Sbjct:     4 SQWTRSEDKMFEQALVLFPEGSPNRWERIADQLH-KSAGEVREHYEVLVHDVFEIDSGRV 62

Query:   119 PLPDY 123
              +PDY
Sbjct:    63 DVPDY 67


>MGI|MGI:99470 [details] [associations]
            symbol:Dnajc2 "DnaJ (Hsp40) homolog, subfamily C, member 2"
            species:10090 "Mus musculus" [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0003682 "chromatin binding" evidence=ISO]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
            evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005829
            "cytosol" evidence=ISO] [GO:0006260 "DNA replication" evidence=IMP]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
            [GO:0030308 "negative regulation of cell growth" evidence=ISO]
            [GO:0030544 "Hsp70 protein binding" evidence=ISO] [GO:0042393
            "histone binding" evidence=ISO] [GO:0043130 "ubiquitin binding"
            evidence=ISO] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=ISO] [GO:2000279 "negative regulation of
            DNA biosynthetic process" evidence=IMP] InterPro:IPR001005
            InterPro:IPR009057 Pfam:PF00249 SMART:SM00717 InterPro:IPR001623
            InterPro:IPR018253 Pfam:PF00226 MGI:MGI:99470 GO:GO:0005829
            GO:GO:0005634 GO:GO:0045893 GO:GO:0030308 GO:GO:0003677
            GO:GO:0006260 GO:GO:0031965 GO:GO:0000085 GO:GO:0006351
            GO:GO:0003682 GO:GO:0016568 Gene3D:1.10.10.60 SUPFAM:SSF46689
            InterPro:IPR017884 PROSITE:PS51293 GO:GO:0042393
            Gene3D:1.10.287.110 SMART:SM00271 SUPFAM:SSF46565 PROSITE:PS00636
            PROSITE:PS50076 InterPro:IPR017930 GO:GO:0043130
            GeneTree:ENSGT00530000063419 CTD:27000 eggNOG:COG5269
            HOGENOM:HOG000006900 HOVERGEN:HBG008782 KO:K09522 OMA:RWFEAFI
            OrthoDB:EOG4D26PN EMBL:D63784 EMBL:AK131964 EMBL:BC052027
            EMBL:U53208 IPI:IPI00126317 PIR:A57591 RefSeq:NP_033610.1
            UniGene:Mm.266312 ProteinModelPortal:P54103 SMR:P54103
            STRING:P54103 PhosphoSite:P54103 PaxDb:P54103 PRIDE:P54103
            Ensembl:ENSMUST00000030771 GeneID:22791 KEGG:mmu:22791
            UCSC:uc008woy.1 InParanoid:P54103 NextBio:303379 Bgee:P54103
            CleanEx:MM_DNAJC2 Genevestigator:P54103
            GermOnline:ENSMUSG00000029014 Uniprot:P54103
        Length = 621

 Score = 124 (48.7 bits), Expect = 7.2e-07, P = 7.2e-07
 Identities = 24/62 (38%), Positives = 36/62 (58%)

Query:    56 IGRSTWTAKQNKLFENALAIYDKDTPDRWHNLARAVGGKTVEEVKRHYEMLAEDVSRIEA 115
             I  + WT ++ KL E AL  Y  +TP+RW  +A AV G+T ++  R Y+ L E V   +A
Sbjct:   549 IDSTPWTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTKKDCMRRYKELVEMVKAKKA 608

Query:   116 GE 117
              +
Sbjct:   609 AQ 610


>RGD|620524 [details] [associations]
            symbol:Dnajc2 "DnaJ (Hsp40) homolog, subfamily C, member 2"
            species:10116 "Rattus norvegicus" [GO:0000085 "G2 phase of mitotic
            cell cycle" evidence=IEA;ISO] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0003682 "chromatin binding" evidence=ISO;ISS]
            [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005737 "cytoplasm"
            evidence=ISO] [GO:0005829 "cytosol" evidence=ISO;ISS] [GO:0006260
            "DNA replication" evidence=IEA;ISO] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
            evidence=IEA] [GO:0030308 "negative regulation of cell growth"
            evidence=IDA] [GO:0030544 "Hsp70 protein binding" evidence=IEA;ISO]
            [GO:0031965 "nuclear membrane" evidence=IEA;ISO] [GO:0042393
            "histone binding" evidence=ISO;ISS] [GO:0043130 "ubiquitin binding"
            evidence=ISO;ISS] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=ISO;ISS] InterPro:IPR001005
            InterPro:IPR009057 Pfam:PF00249 SMART:SM00717 InterPro:IPR001623
            InterPro:IPR018253 Pfam:PF00226 RGD:620524 GO:GO:0005829
            GO:GO:0005634 GO:GO:0045893 GO:GO:0030308 GO:GO:0003677
            GO:GO:0006260 GO:GO:0031965 GO:GO:0000085 GO:GO:0006351
            GO:GO:0003682 GO:GO:0016568 Gene3D:1.10.10.60 SUPFAM:SSF46689
            InterPro:IPR017884 PROSITE:PS51293 GO:GO:0042393
            Gene3D:1.10.287.110 SMART:SM00271 SUPFAM:SSF46565 PROSITE:PS00636
            PROSITE:PS50076 InterPro:IPR017930 GO:GO:0043130
            GeneTree:ENSGT00530000063419 CTD:27000 eggNOG:COG5269
            HOGENOM:HOG000006900 HOVERGEN:HBG008782 KO:K09522 OrthoDB:EOG4D26PN
            HSSP:Q96KC8 EMBL:AY322161 EMBL:AY322163 EMBL:BC088838 EMBL:AF118853
            IPI:IPI00358140 IPI:IPI00991289 RefSeq:NP_446228.2 UniGene:Rn.11908
            ProteinModelPortal:Q7TQ20 STRING:Q7TQ20 PhosphoSite:Q7TQ20
            PRIDE:Q7TQ20 Ensembl:ENSRNOT00000016909 GeneID:116456
            KEGG:rno:116456 InParanoid:Q7TQ18 NextBio:618962
            Genevestigator:Q7TQ20 Uniprot:Q7TQ20
        Length = 621

 Score = 122 (48.0 bits), Expect = 1.2e-06, P = 1.2e-06
 Identities = 23/57 (40%), Positives = 34/57 (59%)

Query:    61 WTAKQNKLFENALAIYDKDTPDRWHNLARAVGGKTVEEVKRHYEMLAEDVSRIEAGE 117
             WT ++ KL E AL  Y  +TP+RW  +A AV G+T ++  R Y+ L E V   +A +
Sbjct:   554 WTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTKKDCMRRYKELVEMVKAKKAAQ 610


>TAIR|locus:2171494 [details] [associations]
            symbol:AT5G47290 "AT5G47290" species:3702 "Arabidopsis
            thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=ISS]
            EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AB018117
            IPI:IPI00548425 RefSeq:NP_199540.1 UniGene:At.65655
            ProteinModelPortal:Q9LVT0 SMR:Q9LVT0 EnsemblPlants:AT5G47290.1
            GeneID:834776 KEGG:ath:AT5G47290 TAIR:At5g47290 PhylomeDB:Q9LVT0
            ProtClustDB:CLSN2686360 Genevestigator:Q9LVT0 Uniprot:Q9LVT0
        Length = 96

 Score = 111 (44.1 bits), Expect = 1.3e-06, P = 1.3e-06
 Identities = 25/73 (34%), Positives = 42/73 (57%)

Query:    57 GRSTWTAKQNKLFENALAIYDKDTPDRWHNLARAVGGKTVEEVKRHYEMLAEDVSRIEAG 116
             G   WT ++NK FE AL +   D+P +   +A  +   +V+E+K HY+ L +D++ IE+G
Sbjct:     3 GTMKWTWEENKAFEVAL-VQVPDSPAKLEIIAAQMR-TSVDEIKYHYDKLLQDIAVIESG 60

Query:   117 EIPLPDYKKIGGT 129
                +P+Y     T
Sbjct:    61 RDVVPEYSPRSAT 73


>UNIPROTKB|I3LNQ0 [details] [associations]
            symbol:I3LNQ0 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003682 "chromatin
            binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
            InterPro:IPR001623 InterPro:IPR018253 Pfam:PF00226 GO:GO:0005634
            GO:GO:0003677 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
            InterPro:IPR017884 PROSITE:PS51293 Gene3D:1.10.287.110
            SMART:SM00271 SUPFAM:SSF46565 PROSITE:PS00636 PROSITE:PS50076
            GeneTree:ENSGT00530000063419 Ensembl:ENSSSCT00000023342
            Uniprot:I3LNQ0
        Length = 503

 Score = 119 (46.9 bits), Expect = 1.9e-06, P = 1.9e-06
 Identities = 22/57 (38%), Positives = 34/57 (59%)

Query:    61 WTAKQNKLFENALAIYDKDTPDRWHNLARAVGGKTVEEVKRHYEMLAEDVSRIEAGE 117
             WT ++ KL E AL  Y  +TP+RW  +A AV G+T ++  + Y+ L E V   +A +
Sbjct:   436 WTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTKKDCMKRYKELVEMVKAKKAAQ 492


>UNIPROTKB|I3LSN5 [details] [associations]
            symbol:I3LSN5 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0003682 "chromatin
            binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
            InterPro:IPR001623 InterPro:IPR018253 Pfam:PF00226 GO:GO:0005634
            GO:GO:0003677 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
            InterPro:IPR017884 PROSITE:PS51293 Gene3D:1.10.287.110
            SMART:SM00271 SUPFAM:SSF46565 PROSITE:PS00636 PROSITE:PS50076
            GeneTree:ENSGT00530000063419 Ensembl:ENSSSCT00000028055 OMA:HEDSTRD
            Uniprot:I3LSN5
        Length = 508

 Score = 119 (46.9 bits), Expect = 1.9e-06, P = 1.9e-06
 Identities = 22/57 (38%), Positives = 34/57 (59%)

Query:    61 WTAKQNKLFENALAIYDKDTPDRWHNLARAVGGKTVEEVKRHYEMLAEDVSRIEAGE 117
             WT ++ KL E AL  Y  +TP+RW  +A AV G+T ++  + Y+ L E V   +A +
Sbjct:   441 WTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTKKDCMKRYKELVEMVKAKKAAQ 497


>UNIPROTKB|Q6P2Y3 [details] [associations]
            symbol:dnajc2 "DnaJ homolog subfamily C member 2"
            species:8364 "Xenopus (Silurana) tropicalis" [GO:0003682 "chromatin
            binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
            [GO:0005829 "cytosol" evidence=ISS] [GO:0042393 "histone binding"
            evidence=ISS] [GO:0043130 "ubiquitin binding" evidence=ISS]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=ISS] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
            SMART:SM00717 InterPro:IPR001623 InterPro:IPR018253 Pfam:PF00226
            GO:GO:0005829 GO:GO:0005634 GO:GO:0045893 GO:GO:0003677
            GO:GO:0006351 GO:GO:0003682 GO:GO:0016568 Gene3D:1.10.10.60
            SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0042393
            Gene3D:1.10.287.110 SMART:SM00271 SUPFAM:SSF46565 PROSITE:PS00636
            PROSITE:PS50076 GO:GO:0043130 GeneTree:ENSGT00530000063419
            CTD:27000 eggNOG:COG5269 HOGENOM:HOG000006900 HOVERGEN:HBG008782
            KO:K09522 OrthoDB:EOG4D26PN EMBL:BC064251 RefSeq:NP_001186412.1
            UniGene:Str.15500 ProteinModelPortal:Q6P2Y3 STRING:Q6P2Y3
            Ensembl:ENSXETT00000049978 GeneID:394933 KEGG:xtr:394933
            Xenbase:XB-GENE-964533 InParanoid:Q6P2Y3 Bgee:Q6P2Y3 Uniprot:Q6P2Y3
        Length = 620

 Score = 119 (46.9 bits), Expect = 2.5e-06, P = 2.5e-06
 Identities = 24/68 (35%), Positives = 39/68 (57%)

Query:    59 STWTAKQNKLFENALAIYDKDTPDRWHNLARAVGGKTVEEVKRHYEMLAEDVSRIEAGEI 118
             S WT ++ KL E AL  Y  +TP+RW  +A AV G++ ++  + Y+ L E V   +A + 
Sbjct:   551 SPWTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRSKKDCMKRYKELVEMVKAKKAAQE 610

Query:   119 PLPDYKKI 126
              + +  KI
Sbjct:   611 QVLNATKI 618


>UNIPROTKB|Q1RMH9 [details] [associations]
            symbol:DNAJC2 "DnaJ homolog subfamily C member 2"
            species:9913 "Bos taurus" [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=ISS] [GO:0003682 "chromatin
            binding" evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
            [GO:0043130 "ubiquitin binding" evidence=ISS] [GO:0005634 "nucleus"
            evidence=ISS] [GO:0005829 "cytosol" evidence=ISS] [GO:0031965
            "nuclear membrane" evidence=IEA] [GO:0030544 "Hsp70 protein
            binding" evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
            [GO:0000085 "G2 phase of mitotic cell cycle" evidence=IEA]
            [GO:0016568 "chromatin modification" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] InterPro:IPR001005 InterPro:IPR009057
            Pfam:PF00249 SMART:SM00717 InterPro:IPR001623 InterPro:IPR018253
            Pfam:PF00226 GO:GO:0005829 GO:GO:0005634 GO:GO:0045893
            GO:GO:0003677 GO:GO:0006260 GO:GO:0031965 GO:GO:0000085
            GO:GO:0006351 GO:GO:0003682 GO:GO:0016568 Gene3D:1.10.10.60
            SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0042393
            Gene3D:1.10.287.110 SMART:SM00271 SUPFAM:SSF46565 PROSITE:PS00636
            PROSITE:PS50076 GO:GO:0043130 InterPro:IPR017877
            GeneTree:ENSGT00530000063419 EMBL:BC114887 IPI:IPI00703453
            RefSeq:NP_001068805.1 UniGene:Bt.61294 ProteinModelPortal:Q1RMH9
            STRING:Q1RMH9 PRIDE:Q1RMH9 Ensembl:ENSBTAT00000004925 GeneID:507897
            KEGG:bta:507897 CTD:27000 eggNOG:COG5269 HOGENOM:HOG000006900
            HOVERGEN:HBG008782 InParanoid:Q1RMH9 KO:K09522 OMA:RWFEAFI
            OrthoDB:EOG4D26PN NextBio:20868264 Uniprot:Q1RMH9
        Length = 621

 Score = 119 (46.9 bits), Expect = 2.5e-06, P = 2.5e-06
 Identities = 22/57 (38%), Positives = 34/57 (59%)

Query:    61 WTAKQNKLFENALAIYDKDTPDRWHNLARAVGGKTVEEVKRHYEMLAEDVSRIEAGE 117
             WT ++ KL E AL  Y  +TP+RW  +A AV G+T ++  + Y+ L E V   +A +
Sbjct:   554 WTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTKKDCMKRYKELVEMVKAKKAAQ 610


>UNIPROTKB|Q99543 [details] [associations]
            symbol:DNAJC2 "DnaJ homolog subfamily C member 2"
            species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0016568 "chromatin modification" evidence=IEA] [GO:0000085 "G2
            phase of mitotic cell cycle" evidence=IEA] [GO:0006260 "DNA
            replication" evidence=IEA] [GO:0030308 "negative regulation of cell
            growth" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0043130 "ubiquitin binding"
            evidence=IDA] [GO:0042393 "histone binding" evidence=IDA]
            [GO:0003682 "chromatin binding" evidence=IDA] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=IDA]
            [GO:0030544 "Hsp70 protein binding" evidence=IPI] [GO:0051083 "'de
            novo' cotranslational protein folding" evidence=TAS] [GO:0005737
            "cytoplasm" evidence=IDA] [GO:0031965 "nuclear membrane"
            evidence=IDA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
            SMART:SM00717 InterPro:IPR001623 InterPro:IPR018253 Pfam:PF00226
            GO:GO:0005829 GO:GO:0045893 GO:GO:0030308 GO:GO:0003677
            GO:GO:0006260 GO:GO:0031965 GO:GO:0000085 GO:GO:0006351
            GO:GO:0003682 GO:GO:0016568 Gene3D:1.10.10.60 SUPFAM:SSF46689
            InterPro:IPR017884 PROSITE:PS51293 GO:GO:0042393
            Gene3D:1.10.287.110 SMART:SM00271 SUPFAM:SSF46565 PROSITE:PS00636
            PROSITE:PS50076 GO:GO:0043130 CTD:27000 eggNOG:COG5269
            HOGENOM:HOG000006900 HOVERGEN:HBG008782 KO:K09522 OMA:RWFEAFI
            EMBL:X98260 EMBL:AC004668 EMBL:BC000859 EMBL:BC139751
            IPI:IPI00455199 IPI:IPI00830108 RefSeq:NP_001123359.1
            RefSeq:NP_055192.1 UniGene:Hs.558476 ProteinModelPortal:Q99543
            SMR:Q99543 STRING:Q99543 PhosphoSite:Q99543 DMDM:296439472
            PaxDb:Q99543 PRIDE:Q99543 DNASU:27000 Ensembl:ENST00000249270
            Ensembl:ENST00000379263 GeneID:27000 KEGG:hsa:27000 UCSC:uc003vbo.3
            UCSC:uc010lix.3 GeneCards:GC07M102952 HGNC:HGNC:13192 HPA:HPA020454
            MIM:605502 neXtProt:NX_Q99543 PharmGKB:PA162383835
            InParanoid:Q99543 GenomeRNAi:27000 NextBio:49486
            ArrayExpress:Q99543 Bgee:Q99543 CleanEx:HS_DNAJC2
            Genevestigator:Q99543 GermOnline:ENSG00000105821 GO:GO:0051083
            Uniprot:Q99543
        Length = 621

 Score = 119 (46.9 bits), Expect = 2.5e-06, P = 2.5e-06
 Identities = 22/57 (38%), Positives = 34/57 (59%)

Query:    61 WTAKQNKLFENALAIYDKDTPDRWHNLARAVGGKTVEEVKRHYEMLAEDVSRIEAGE 117
             WT ++ KL E AL  Y  +TP+RW  +A AV G+T ++  + Y+ L E V   +A +
Sbjct:   554 WTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTKKDCMKRYKELVEMVKAKKAAQ 610


>UNIPROTKB|F1SB54 [details] [associations]
            symbol:DNAJC2 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0043130 "ubiquitin binding"
            evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
            [GO:0031965 "nuclear membrane" evidence=IEA] [GO:0030544 "Hsp70
            protein binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
            [GO:0003682 "chromatin binding" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] InterPro:IPR001005 InterPro:IPR009057
            Pfam:PF00249 SMART:SM00717 InterPro:IPR001623 InterPro:IPR018253
            Pfam:PF00226 GO:GO:0005829 GO:GO:0045893 GO:GO:0003677
            GO:GO:0031965 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
            InterPro:IPR017884 PROSITE:PS51293 Gene3D:1.10.287.110
            SMART:SM00271 SUPFAM:SSF46565 PROSITE:PS00636 PROSITE:PS50076
            InterPro:IPR017877 PROSITE:PS50090 GeneTree:ENSGT00530000063419
            KO:K09522 EMBL:CU570825 RefSeq:XP_003130290.1
            Ensembl:ENSSSCT00000016801 GeneID:100514533 KEGG:ssc:100514533
            OMA:FQSWRDF Uniprot:F1SB54
        Length = 621

 Score = 119 (46.9 bits), Expect = 2.5e-06, P = 2.5e-06
 Identities = 22/57 (38%), Positives = 34/57 (59%)

Query:    61 WTAKQNKLFENALAIYDKDTPDRWHNLARAVGGKTVEEVKRHYEMLAEDVSRIEAGE 117
             WT ++ KL E AL  Y  +TP+RW  +A AV G+T ++  + Y+ L E V   +A +
Sbjct:   554 WTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTKKDCMKRYKELVEMVKAKKAAQ 610


>UNIPROTKB|Q4R8H2 [details] [associations]
            symbol:DNAJC2 "DnaJ homolog subfamily C member 2"
            species:9541 "Macaca fascicularis" [GO:0003682 "chromatin binding"
            evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005829
            "cytosol" evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
            [GO:0043130 "ubiquitin binding" evidence=ISS] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=ISS]
            InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
            InterPro:IPR001623 InterPro:IPR018253 Pfam:PF00226 GO:GO:0005829
            GO:GO:0005634 GO:GO:0045893 GO:GO:0003677 GO:GO:0006351
            GO:GO:0003682 GO:GO:0016568 Gene3D:1.10.10.60 SUPFAM:SSF46689
            InterPro:IPR017884 PROSITE:PS51293 GO:GO:0042393
            Gene3D:1.10.287.110 SMART:SM00271 SUPFAM:SSF46565 PROSITE:PS00636
            PROSITE:PS50076 GO:GO:0043130 HOVERGEN:HBG008782 OrthoDB:EOG4D26PN
            EMBL:AB168480 HSSP:Q96KC8 ProteinModelPortal:Q4R8H2 PRIDE:Q4R8H2
            Uniprot:Q4R8H2
        Length = 621

 Score = 119 (46.9 bits), Expect = 2.5e-06, P = 2.5e-06
 Identities = 22/57 (38%), Positives = 34/57 (59%)

Query:    61 WTAKQNKLFENALAIYDKDTPDRWHNLARAVGGKTVEEVKRHYEMLAEDVSRIEAGE 117
             WT ++ KL E AL  Y  +TP+RW  +A AV G+T ++  + Y+ L E V   +A +
Sbjct:   554 WTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTKKDCMKRYKELVEMVKAKKAAQ 610


>UNIPROTKB|E2RS54 [details] [associations]
            symbol:DNAJC2 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
            "chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
            SMART:SM00717 InterPro:IPR001623 InterPro:IPR018253 Pfam:PF00226
            GO:GO:0005634 GO:GO:0003677 GO:GO:0003682 Gene3D:1.10.10.60
            SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
            Gene3D:1.10.287.110 SMART:SM00271 SUPFAM:SSF46565 PROSITE:PS00636
            PROSITE:PS50076 GeneTree:ENSGT00530000063419 OMA:RWFEAFI
            EMBL:AAEX03011249 Ensembl:ENSCAFT00000006800 Uniprot:E2RS54
        Length = 627

 Score = 119 (46.9 bits), Expect = 2.5e-06, P = 2.5e-06
 Identities = 22/57 (38%), Positives = 34/57 (59%)

Query:    61 WTAKQNKLFENALAIYDKDTPDRWHNLARAVGGKTVEEVKRHYEMLAEDVSRIEAGE 117
             WT ++ KL E AL  Y  +TP+RW  +A AV G+T ++  + Y+ L E V   +A +
Sbjct:   560 WTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTKKDCMKRYKELVEMVKAKKAAQ 616


>UNIPROTKB|F1P3V8 [details] [associations]
            symbol:DNAJC2 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0000085
            "G2 phase of mitotic cell cycle" evidence=IEA] [GO:0003682
            "chromatin binding" evidence=IEA] [GO:0005829 "cytosol"
            evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
            [GO:0030544 "Hsp70 protein binding" evidence=IEA] [GO:0031965
            "nuclear membrane" evidence=IEA] [GO:0042393 "histone binding"
            evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IEA]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=IEA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
            SMART:SM00717 InterPro:IPR001623 InterPro:IPR018253 Pfam:PF00226
            GO:GO:0005829 GO:GO:0045893 GO:GO:0003677 GO:GO:0006260
            GO:GO:0031965 GO:GO:0000085 GO:GO:0003682 Gene3D:1.10.10.60
            SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
            Gene3D:1.10.287.110 SMART:SM00271 SUPFAM:SSF46565 PROSITE:PS00636
            PROSITE:PS50076 InterPro:IPR017877 PROSITE:PS50090
            GeneTree:ENSGT00530000063419 OMA:RWFEAFI EMBL:AADN02036895
            IPI:IPI00571328 Ensembl:ENSGALT00000013428 Uniprot:F1P3V8
        Length = 621

 Score = 118 (46.6 bits), Expect = 3.2e-06, P = 3.2e-06
 Identities = 23/68 (33%), Positives = 39/68 (57%)

Query:    59 STWTAKQNKLFENALAIYDKDTPDRWHNLARAVGGKTVEEVKRHYEMLAEDVSRIEAGEI 118
             S WT ++ KL E AL  Y  +TP+RW  +A AV G++ ++  + Y+ L E V   +A + 
Sbjct:   552 SPWTTEEQKLLEQALKTYPVNTPERWEKIAAAVPGRSKKDCMKRYKELVEMVKAKKAAQE 611

Query:   119 PLPDYKKI 126
              + +  K+
Sbjct:   612 QVMNATKV 619


>ZFIN|ZDB-GENE-061103-529 [details] [associations]
            symbol:dnajc1 "DnaJ (Hsp40) homolog, subfamily C,
            member 1" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001005
            InterPro:IPR009057 Pfam:PF00249 SMART:SM00717 InterPro:IPR001623
            InterPro:IPR018253 Pfam:PF00226 ZFIN:ZDB-GENE-061103-529
            GO:GO:0005634 GO:GO:0006457 GO:GO:0003677 GO:GO:0003682
            Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
            PROSITE:PS51293 Gene3D:1.10.287.110 PRINTS:PR00625 SMART:SM00271
            SUPFAM:SSF46565 PROSITE:PS00636 PROSITE:PS50076 InterPro:IPR017877
            PROSITE:PS50090 HOVERGEN:HBG051374 OMA:RRQKDFD
            GeneTree:ENSGT00530000063419 EMBL:CR388093 IPI:IPI00497164
            UniGene:Dr.76280 SMR:B0UXV7 Ensembl:ENSDART00000079518
            Uniprot:B0UXV7
        Length = 526

 Score = 117 (46.2 bits), Expect = 3.2e-06, P = 3.2e-06
 Identities = 23/58 (39%), Positives = 32/58 (55%)

Query:    55 GIGRSTWTAKQNKLFENALAIYDKDTPDRWHNLARAVGGKTVEEVKRHYEMLAEDVSR 112
             G     WT  Q KL E AL  Y + T +RW  +A+ V GKT EE    +++LAE + +
Sbjct:   463 GAAEDVWTQNQQKLLELALQQYPRGTTERWDKIAKVVPGKTKEECMCRFKLLAELIQK 520


>UNIPROTKB|F1NUR7 [details] [associations]
            symbol:DNAJC1 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
            "chromatin binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
            [GO:0006417 "regulation of translation" evidence=IEA] [GO:0006457
            "protein folding" evidence=IEA] [GO:0050708 "regulation of protein
            secretion" evidence=IEA] [GO:0051087 "chaperone binding"
            evidence=IEA] InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249
            SMART:SM00717 InterPro:IPR001623 InterPro:IPR018253 Pfam:PF00226
            GO:GO:0005783 GO:GO:0005634 GO:GO:0006457 GO:GO:0006417
            GO:GO:0003677 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
            InterPro:IPR017884 PROSITE:PS51293 GO:GO:0050708
            Gene3D:1.10.287.110 PRINTS:PR00625 SMART:SM00271 SUPFAM:SSF46565
            PROSITE:PS00636 PROSITE:PS50076 InterPro:IPR017877 PROSITE:PS50090
            OMA:RRQKDFD GeneTree:ENSGT00530000063419 EMBL:AADN02000601
            IPI:IPI00603827 Ensembl:ENSGALT00000012853 Uniprot:F1NUR7
        Length = 500

 Score = 116 (45.9 bits), Expect = 3.9e-06, P = 3.9e-06
 Identities = 24/52 (46%), Positives = 29/52 (55%)

Query:    61 WTAKQNKLFENALAIYDKDTPDRWHNLARAVGGKTVEEVKRHYEMLAEDVSR 112
             WT  Q KL E AL  Y K T DRW  +A+ V GK+ EE    Y +L E V +
Sbjct:   443 WTQNQQKLLEMALQQYPKGTSDRWDKIAKCVPGKSKEECIARYRLLVELVQK 494


>TAIR|locus:2133667 [details] [associations]
            symbol:AT4G09450 species:3702 "Arabidopsis thaliana"
            [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
            evidence=ISM] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=TAS]
            InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
            EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700
            GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017930
            InterPro:IPR006447 TIGRFAMs:TIGR01557 PROSITE:PS51294 EMBL:AL161514
            HOGENOM:HOG000237920 EMBL:AY122911 IPI:IPI00520050 PIR:C85096
            RefSeq:NP_192683.1 UniGene:At.33693 ProteinModelPortal:Q9M0P7
            SMR:Q9M0P7 DNASU:826528 EnsemblPlants:AT4G09450.1 GeneID:826528
            KEGG:ath:AT4G09450 TAIR:At4g09450 eggNOG:NOG301281
            InParanoid:Q9M0P7 OMA:EGLNKFG PhylomeDB:Q9M0P7
            ProtClustDB:CLSN2684024 Genevestigator:Q9M0P7 Uniprot:Q9M0P7
        Length = 200

 Score = 104 (41.7 bits), Expect = 0.00015, P = 0.00015
 Identities = 34/95 (35%), Positives = 49/95 (51%)

Query:    61 WTAKQNKLFENALAIYDKDTPDRWHNLARAVGGKTVEEVKRHYEMLAEDVSRIEAGEIPL 120
             WT   +K FE AL    + +P+   N+A  +  K V+EV+ +Y  L  D+ RIE+G+  L
Sbjct:     7 WTRVDDKRFELALLQIPEGSPNFIENIAYYLQ-KPVKEVEYYYCALVHDIERIESGKYVL 65

Query:   121 P-----DYKKI--GGTNKAHSY---INMDNEEQRL 145
             P     DY K+   G +K +     I    EEQRL
Sbjct:    66 PKYPEDDYVKLTEAGESKGNGKKTGIPWSEEEQRL 100


>TAIR|locus:2075775 [details] [associations]
            symbol:AT3G10580 species:3702 "Arabidopsis thaliana"
            [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=ISS]
            InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
            EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700
            GO:GO:0003682 EMBL:AC011560 EMBL:AC013428 Gene3D:1.10.10.60
            SUPFAM:SSF46689 InterPro:IPR017930 InterPro:IPR006447
            TIGRFAMs:TIGR01557 PROSITE:PS51294 HOGENOM:HOG000237920
            ProtClustDB:CLSN2684024 IPI:IPI00530835 RefSeq:NP_187669.1
            UniGene:At.53250 ProteinModelPortal:Q9SQY8 SMR:Q9SQY8
            EnsemblPlants:AT3G10580.1 GeneID:820225 KEGG:ath:AT3G10580
            TAIR:At3g10580 InParanoid:Q9SQY8 OMA:NIAQFLQ PhylomeDB:Q9SQY8
            Genevestigator:Q9SQY8 Uniprot:Q9SQY8
        Length = 287

 Score = 106 (42.4 bits), Expect = 0.00017, P = 0.00017
 Identities = 24/64 (37%), Positives = 39/64 (60%)

Query:    61 WTAKQNKLFENALAIYDKD-TPDRWHNLARAVGGKTVEEVKRHYEMLAEDVSRIEAGEIP 119
             W    +K FE AL  +  + +PD   N+A+ +  K ++EV  +Y+ L +DV+ IE+G+ P
Sbjct:     8 WKRDDDKRFELALVRFPAEGSPDFLENIAQFLQ-KPLKEVYSYYQALVDDVTLIESGKYP 66

Query:   120 LPDY 123
             LP Y
Sbjct:    67 LPKY 70


>RGD|2322144 [details] [associations]
            symbol:Dnajc1 "DnaJ (Hsp40) homolog, subfamily C, member 1"
            species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005783 "endoplasmic
            reticulum" evidence=IEA;ISO] [GO:0006417 "regulation of
            translation" evidence=IEA;ISO] [GO:0006457 "protein folding"
            evidence=IEA;ISO] [GO:0050708 "regulation of protein secretion"
            evidence=IEA;ISO] [GO:0051087 "chaperone binding" evidence=IEA;ISO]
            InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
            InterPro:IPR001623 InterPro:IPR018253 Pfam:PF00226 RGD:2322144
            GO:GO:0005783 GO:GO:0005634 GO:GO:0006457 GO:GO:0006417
            GO:GO:0003677 GO:GO:0003682 SUPFAM:SSF46689 InterPro:IPR017884
            PROSITE:PS51293 GO:GO:0050708 Gene3D:1.10.287.110 PRINTS:PR00625
            SMART:SM00271 SUPFAM:SSF46565 PROSITE:PS00636 PROSITE:PS50076
            GeneTree:ENSGT00530000063419 IPI:IPI00363173
            Ensembl:ENSRNOT00000000162 Uniprot:F1LVX1
        Length = 484

 Score = 105 (42.0 bits), Expect = 0.00056, P = 0.00056
 Identities = 22/60 (36%), Positives = 30/60 (50%)

Query:    53 RNGIGRSTWTAKQNKLFENALAIYDKDTPDRWHNLARAVGGKTVEEVKRHYEMLAEDVSR 112
             R+      WT  Q KL E AL  Y K   DRW  +A+ V  K+ E+    Y++L E V +
Sbjct:   419 RSRAAEDAWTQSQQKLLELALQQYPKGASDRWDKIAKCVPSKSKEDCIARYKLLVELVQK 478


>TAIR|locus:504955890 [details] [associations]
            symbol:AT3G10595 species:3702 "Arabidopsis thaliana"
            [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=ISS]
            InterPro:IPR001005 InterPro:IPR009057 SMART:SM00717 GO:GO:0005634
            EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003682
            EMBL:AC013428 SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
            HOGENOM:HOG000237920 EMBL:BT015072 EMBL:BT015666 IPI:IPI00517930
            RefSeq:NP_683547.2 UniGene:At.49612 ProteinModelPortal:Q9LPN9
            SMR:Q9LPN9 EnsemblPlants:AT3G10595.1 GeneID:820228
            KEGG:ath:AT3G10595 TAIR:At3g10595 eggNOG:NOG296411
            InParanoid:Q9LPN9 OMA:KETHEWF PhylomeDB:Q9LPN9
            ProtClustDB:CLSN2915149 Genevestigator:Q9LPN9 Uniprot:Q9LPN9
        Length = 183

 Score = 98 (39.6 bits), Expect = 0.00091, P = 0.00091
 Identities = 17/67 (25%), Positives = 41/67 (61%)

Query:    56 IGRSTWTAKQNKLFENALAIYDKDTPDRWHNLARAVGGKTVEEVKRHYEMLAEDVSRIEA 115
             +  ++WT ++N++F++AL ++      R+ ++A  V  ++V++VK HY+ L  D+  + +
Sbjct:     1 MAENSWTTEENEMFKDALVMFTAFLLTRFESVAEYVD-RSVDDVKEHYKELVNDLLEMGS 59

Query:   116 GEIPLPD 122
               +  P+
Sbjct:    60 SRVAFPN 66


>WB|WBGene00018836 [details] [associations]
            symbol:F54F2.9 species:6239 "Caenorhabditis elegans"
            [GO:0003682 "chromatin binding" evidence=IEA] [GO:0031072 "heat
            shock protein binding" evidence=IEA] [GO:0006457 "protein folding"
            evidence=IEA] [GO:0051082 "unfolded protein binding" evidence=IEA]
            [GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR001005
            InterPro:IPR009057 Pfam:PF00249 SMART:SM00717 InterPro:IPR001623
            Pfam:PF00226 GO:GO:0016021 GO:GO:0006457 GO:GO:0003677
            GO:GO:0031965 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
            InterPro:IPR017884 PROSITE:PS51293 Gene3D:1.10.287.110
            PRINTS:PR00625 SMART:SM00271 SUPFAM:SSF46565 PROSITE:PS00636
            PROSITE:PS50076 InterPro:IPR017877 PROSITE:PS50090 eggNOG:COG2214
            HOGENOM:HOG000231867 KO:K09521 GeneTree:ENSGT00530000063419
            EMBL:FO081385 PIR:S44823 RefSeq:NP_498949.2
            ProteinModelPortal:P34454 SMR:P34454 PaxDb:P34454
            EnsemblMetazoa:F54F2.9 GeneID:176241 KEGG:cel:CELE_F54F2.9
            UCSC:F54F2.9 CTD:176241 WormBase:F54F2.9 InParanoid:P34454
            OMA:IGTIAHY NextBio:891724 Uniprot:P34454
        Length = 414

 Score = 103 (41.3 bits), Expect = 0.00096, P = 0.00096
 Identities = 18/52 (34%), Positives = 30/52 (57%)

Query:    61 WTAKQNKLFENALAIYDKDTPDRWHNLARAVGGKTVEEVKRHYEMLAEDVSR 112
             W+  + K FE AL  Y K T +RW  ++  +G KT ++V   ++ LAE + +
Sbjct:   357 WSQAEQKAFETALQKYPKGTDERWERISEEIGSKTKKQVMVRFKQLAEMIRK 408


>UNIPROTKB|P34454 [details] [associations]
            symbol:F54F2.9 "Uncharacterized protein F54F2.9"
            species:6239 "Caenorhabditis elegans" [GO:0008150
            "biological_process" evidence=ND] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
            InterPro:IPR001005 InterPro:IPR009057 Pfam:PF00249 SMART:SM00717
            InterPro:IPR001623 Pfam:PF00226 GO:GO:0016021 GO:GO:0006457
            GO:GO:0003677 GO:GO:0031965 GO:GO:0003682 Gene3D:1.10.10.60
            SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
            Gene3D:1.10.287.110 PRINTS:PR00625 SMART:SM00271 SUPFAM:SSF46565
            PROSITE:PS00636 PROSITE:PS50076 InterPro:IPR017877 PROSITE:PS50090
            eggNOG:COG2214 HOGENOM:HOG000231867 KO:K09521
            GeneTree:ENSGT00530000063419 EMBL:FO081385 PIR:S44823
            RefSeq:NP_498949.2 ProteinModelPortal:P34454 SMR:P34454
            PaxDb:P34454 EnsemblMetazoa:F54F2.9 GeneID:176241
            KEGG:cel:CELE_F54F2.9 UCSC:F54F2.9 CTD:176241 WormBase:F54F2.9
            InParanoid:P34454 OMA:IGTIAHY NextBio:891724 Uniprot:P34454
        Length = 414

 Score = 103 (41.3 bits), Expect = 0.00096, P = 0.00096
 Identities = 18/52 (34%), Positives = 30/52 (57%)

Query:    61 WTAKQNKLFENALAIYDKDTPDRWHNLARAVGGKTVEEVKRHYEMLAEDVSR 112
             W+  + K FE AL  Y K T +RW  ++  +G KT ++V   ++ LAE + +
Sbjct:   357 WSQAEQKAFETALQKYPKGTDERWERISEEIGSKTKKQVMVRFKQLAEMIRK 408


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.136   0.410    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      153       153   0.00081  105 3  11 22  0.46    31
                                                     30  0.41    34


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  37
  No. of states in DFA:  602 (64 KB)
  Total size of DFA:  153 KB (2092 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  16.32u 0.17s 16.49t   Elapsed:  00:00:00
  Total cpu time:  16.32u 0.17s 16.49t   Elapsed:  00:00:00
  Start:  Fri May 10 14:46:28 2013   End:  Fri May 10 14:46:28 2013

Back to top