BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041475
(153 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q1A173|RADL6_ARATH Protein RADIALIS-like 6 OS=Arabidopsis thaliana GN=RL6 PE=2 SV=1
Length = 97
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 71/92 (77%), Gaps = 4/92 (4%)
Query: 59 STWTAKQNKLFENALAIYDKDTPDRWHNLARAVGGKTVEEVKRHYEMLAEDVSRIEAGEI 118
S WT QNK+FE ALA+YDKDTPDRWHN+A+AVGGKTVEEVKRHY++L ED+ IE G +
Sbjct: 10 SPWTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVEDLINIETGRV 69
Query: 119 PLPDYKKIGGTNKAHSYINMDNEEQRLKTLRL 150
PLP+YK +++ IN D + +++K L++
Sbjct: 70 PLPNYKTFESNSRS---IN-DFDTRKMKNLKI 97
>sp|F4JVB8|RADL1_ARATH Protein RADIALIS-like 1 OS=Arabidopsis thaliana GN=RL1 PE=2 SV=1
Length = 100
Score = 114 bits (285), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 65/91 (71%), Gaps = 4/91 (4%)
Query: 61 WTAKQNKLFENALAIYDKDTPDRWHNLARAVGGKTVEEVKRHYEMLAEDVSRIEAGEIPL 120
WTAKQNK FE ALA YD+DTP+RW N+A+ VGGKT EEVKRHYE+L +D++ IE G +P
Sbjct: 14 WTAKQNKAFEQALATYDQDTPNRWQNVAKVVGGKTTEEVKRHYELLVQDINSIENGHVPF 73
Query: 121 PDYKKIGGTNKAHSYINMDNEEQRLKTLRLS 151
P+Y+ GG + EE+R++ +RL
Sbjct: 74 PNYRTSGGCTNGR----LSQEEKRMRNMRLQ 100
>sp|Q58FS3|RAD_ANTMA Transcription factor RADIALIS OS=Antirrhinum majus GN=RAD PE=1 SV=1
Length = 93
Score = 112 bits (280), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 52/96 (54%), Positives = 70/96 (72%), Gaps = 9/96 (9%)
Query: 55 GIGRSTWTAKQNKLFENALAIYDKDTPDRWHNLARAVGGKTVEEVKRHYEMLAEDVSRIE 114
G GR W+AK+NK FE ALA+YDKDTPDRW N+ARAV G+T EEVK+HYE+L ED+ IE
Sbjct: 6 GSGRP-WSAKENKAFERALAVYDKDTPDRWANVARAVEGRTPEEVKKHYEILVEDIKYIE 64
Query: 115 AGEIPLPDYKKIGGTNKAHSYINMDNEEQRLKTLRL 150
+G++P P+Y+ GG NM +E+R + L++
Sbjct: 65 SGKVPFPNYRTTGG--------NMKTDEKRFRNLKI 92
>sp|Q9SIJ5|RADL2_ARATH Protein RADIALIS-like 2 OS=Arabidopsis thaliana GN=RL2 PE=2 SV=1
Length = 101
Score = 112 bits (280), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 50/92 (54%), Positives = 67/92 (72%), Gaps = 5/92 (5%)
Query: 61 WTAKQNKLFENALAIYDKDTPDRWHNLARAVGGKTVEEVKRHYEMLAEDVSRIEAGEIPL 120
WT KQNK FE ALA+YD+DTPDRWHN+ARAVGGKT EE KR Y++L D+ IE G +P
Sbjct: 14 WTVKQNKAFERALAVYDQDTPDRWHNVARAVGGKTPEEAKRQYDLLVRDIESIENGHVPF 73
Query: 121 PDYK-KIGGTNKAHSYINMDNEEQRLKTLRLS 151
PDYK G +N+ + +EE+R+++++L
Sbjct: 74 PDYKTTTGNSNRGR----LRDEEKRMRSMKLQ 101
>sp|Q6NNN0|RADL3_ARATH Protein RADIALIS-like 3 OS=Arabidopsis thaliana GN=RL3 PE=2 SV=1
Length = 81
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 45/69 (65%), Positives = 55/69 (79%)
Query: 61 WTAKQNKLFENALAIYDKDTPDRWHNLARAVGGKTVEEVKRHYEMLAEDVSRIEAGEIPL 120
WT K+NKLFE ALA YD+DTPDRWHN+ARAVGGK+ EEV+RHYE+L DV+ IE+G P
Sbjct: 12 WTRKENKLFERALATYDQDTPDRWHNVARAVGGKSAEEVRRHYELLIRDVNDIESGRYPH 71
Query: 121 PDYKKIGGT 129
P+Y+ G
Sbjct: 72 PNYRSNGNN 80
>sp|Q8GW75|RADL5_ARATH Protein RADIALIS-like 5 OS=Arabidopsis thaliana GN=RL5 PE=3 SV=1
Length = 100
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 43/76 (56%), Positives = 56/76 (73%)
Query: 64 KQNKLFENALAIYDKDTPDRWHNLARAVGGKTVEEVKRHYEMLAEDVSRIEAGEIPLPDY 123
KQNK+FE ALA+YDKDTPDRW N+A+AVG K+ EEVKRHY++L ED+ IE +PLP Y
Sbjct: 15 KQNKMFERALAVYDKDTPDRWQNVAKAVGSKSAEEVKRHYDILVEDLMNIEQDLVPLPKY 74
Query: 124 KKIGGTNKAHSYINMD 139
K + +K+ + D
Sbjct: 75 KTVDVGSKSRGIDDFD 90
>sp|Q1G3C4|RADL4_ARATH Protein RADIALIS-like 4 OS=Arabidopsis thaliana GN=RL4 PE=2 SV=1
Length = 77
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 38/61 (62%), Positives = 48/61 (78%)
Query: 64 KQNKLFENALAIYDKDTPDRWHNLARAVGGKTVEEVKRHYEMLAEDVSRIEAGEIPLPDY 123
+++K FE ALA +DKDTPDRW +ARAVGGK+ EEVKRHYE+L DV+ IE+G P P Y
Sbjct: 14 REDKQFEMALAKFDKDTPDRWQKIARAVGGKSTEEVKRHYELLLRDVNDIESGRYPQPRY 73
Query: 124 K 124
+
Sbjct: 74 R 74
>sp|Q8S9H7|DIV_ANTMA Transcription factor DIVARICATA OS=Antirrhinum majus GN=DIVARICATA
PE=2 SV=1
Length = 307
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 51/68 (75%), Gaps = 2/68 (2%)
Query: 58 RST--WTAKQNKLFENALAIYDKDTPDRWHNLARAVGGKTVEEVKRHYEMLAEDVSRIEA 115
RST WTA +NK FENALA++D++TP+RW +A V GKTV +V R Y+ L +DVS IEA
Sbjct: 21 RSTTRWTAAENKAFENALAVFDENTPNRWERVAERVPGKTVGDVMRQYKELEDDVSSIEA 80
Query: 116 GEIPLPDY 123
G +P+P Y
Sbjct: 81 GFVPVPGY 88
>sp|P54103|DNJC2_MOUSE DnaJ homolog subfamily C member 2 OS=Mus musculus GN=Dnajc2 PE=1
SV=2
Length = 621
Score = 50.8 bits (120), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 36/62 (58%)
Query: 56 IGRSTWTAKQNKLFENALAIYDKDTPDRWHNLARAVGGKTVEEVKRHYEMLAEDVSRIEA 115
I + WT ++ KL E AL Y +TP+RW +A AV G+T ++ R Y+ L E V +A
Sbjct: 549 IDSTPWTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTKKDCMRRYKELVEMVKAKKA 608
Query: 116 GE 117
+
Sbjct: 609 AQ 610
>sp|Q7TQ20|DNJC2_RAT DnaJ homolog subfamily C member 2 OS=Rattus norvegicus GN=Dnajc2
PE=2 SV=1
Length = 621
Score = 49.7 bits (117), Expect = 6e-06, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 34/57 (59%)
Query: 61 WTAKQNKLFENALAIYDKDTPDRWHNLARAVGGKTVEEVKRHYEMLAEDVSRIEAGE 117
WT ++ KL E AL Y +TP+RW +A AV G+T ++ R Y+ L E V +A +
Sbjct: 554 WTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTKKDCMRRYKELVEMVKAKKAAQ 610
>sp|Q6P2Y3|DNJC2_XENTR DnaJ homolog subfamily C member 2 OS=Xenopus tropicalis GN=dnajc2
PE=2 SV=2
Length = 620
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/68 (35%), Positives = 39/68 (57%)
Query: 59 STWTAKQNKLFENALAIYDKDTPDRWHNLARAVGGKTVEEVKRHYEMLAEDVSRIEAGEI 118
S WT ++ KL E AL Y +TP+RW +A AV G++ ++ + Y+ L E V +A +
Sbjct: 551 SPWTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRSKKDCMKRYKELVEMVKAKKAAQE 610
Query: 119 PLPDYKKI 126
+ + KI
Sbjct: 611 QVLNATKI 618
>sp|Q1RMH9|DNJC2_BOVIN DnaJ homolog subfamily C member 2 OS=Bos taurus GN=DNAJC2 PE=2 SV=1
Length = 621
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 47 CTLFSFRNGIGRSTWTAKQNKLFENALAIYDKDTPDRWHNLARAVGGKTVEEVKRHYEML 106
CT F+ WT ++ KL E AL Y +TP+RW +A AV G+T ++ + Y+ L
Sbjct: 548 CTDFT--------PWTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTKKDCMKRYKEL 599
Query: 107 AEDVSRIEAGE 117
E V +A +
Sbjct: 600 VEMVKAKKAAQ 610
>sp|Q4R8H2|DNJC2_MACFA DnaJ homolog subfamily C member 2 OS=Macaca fascicularis GN=DNAJC2
PE=2 SV=1
Length = 621
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%)
Query: 59 STWTAKQNKLFENALAIYDKDTPDRWHNLARAVGGKTVEEVKRHYEMLAEDVSRIEAGE 117
+ WT ++ KL E AL Y +TP+RW +A AV G+T ++ + Y+ L E V +A +
Sbjct: 552 TPWTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTKKDCMKRYKELVEMVKAKKAAQ 610
>sp|Q99543|DNJC2_HUMAN DnaJ homolog subfamily C member 2 OS=Homo sapiens GN=DNAJC2 PE=1
SV=4
Length = 621
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%)
Query: 59 STWTAKQNKLFENALAIYDKDTPDRWHNLARAVGGKTVEEVKRHYEMLAEDVSRIEAGE 117
+ WT ++ KL E AL Y +TP+RW +A AV G+T ++ + Y+ L E V +A +
Sbjct: 552 TPWTTEEQKLLEQALKTYPVNTPERWEKIAEAVPGRTKKDCMKRYKELVEMVKAKKAAQ 610
>sp|Q96KC8|DNJC1_HUMAN DnaJ homolog subfamily C member 1 OS=Homo sapiens GN=DNAJC1 PE=1
SV=1
Length = 554
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/65 (38%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 51 SFRNGIGRST---WTAKQNKLFENALAIYDKDTPDRWHNLARAVGGKTVEEVKRHYEMLA 107
S R RS WT Q KL E AL Y + + DRW +AR V K+ E+ Y++L
Sbjct: 484 SLRKERARSAEEPWTQNQQKLLELALQQYPRGSSDRWDKIARCVPSKSKEDCIARYKLLV 543
Query: 108 EDVSR 112
E V +
Sbjct: 544 ELVQK 548
>sp|Q61712|DNJC1_MOUSE DnaJ homolog subfamily C member 1 OS=Mus musculus GN=Dnajc1 PE=1
SV=1
Length = 552
Score = 43.5 bits (101), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 29/60 (48%)
Query: 53 RNGIGRSTWTAKQNKLFENALAIYDKDTPDRWHNLARAVGGKTVEEVKRHYEMLAEDVSR 112
R WT Q KL E AL Y K DRW +A+ V K+ E+ Y++L E V +
Sbjct: 487 RTRAAEEAWTQSQQKLLELALQQYPKGASDRWDKIAKCVPSKSKEDCIARYKLLVELVQK 546
>sp|Q6NWJ4|DNJC2_DANRE DnaJ homolog subfamily C member 2 OS=Danio rerio GN=dnajc2 PE=2
SV=1
Length = 618
Score = 42.4 bits (98), Expect = 0.001, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 33/59 (55%)
Query: 59 STWTAKQNKLFENALAIYDKDTPDRWHNLARAVGGKTVEEVKRHYEMLAEDVSRIEAGE 117
+ WT ++ KL E AL Y T +RW ++ AV G++ ++ + Y+ L E + +A +
Sbjct: 551 AAWTTEEQKLLEQALKTYPVSTAERWERISEAVPGRSKKDCMKRYKELVEMIKAKKAAQ 609
>sp|P34454|YMA9_CAEEL Uncharacterized protein F54F2.9 OS=Caenorhabditis elegans
GN=F54F2.9 PE=4 SV=3
Length = 414
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 30/52 (57%)
Query: 61 WTAKQNKLFENALAIYDKDTPDRWHNLARAVGGKTVEEVKRHYEMLAEDVSR 112
W+ + K FE AL Y K T +RW ++ +G KT ++V ++ LAE + +
Sbjct: 357 WSQAEQKAFETALQKYPKGTDERWERISEEIGSKTKKQVMVRFKQLAEMIRK 408
>sp|Q54IF9|MYBG_DICDI Myb-like protein G OS=Dictyostelium discoideum GN=mybG PE=3 SV=1
Length = 423
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 5/69 (7%)
Query: 58 RSTWTAKQNKLFENALAIYDKDTPDRWHNLARAVGGKTVEEVKRHYEMLAEDVSRIEAGE 117
R WT ++++ F AL ++D+D W + VG KTV +++ H + V + GE
Sbjct: 41 RENWTDEEHQKFLEALTLFDRD----WKKIESFVGSKTVIQIRSHAQKYFIKVQKNNTGE 96
Query: 118 -IPLPDYKK 125
IP P K+
Sbjct: 97 RIPPPRPKR 105
>sp|A0JMR6|MYSM1_XENLA Histone H2A deubiquitinase MYSM1 OS=Xenopus laevis GN=mysm1 PE=2
SV=1
Length = 818
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 15/75 (20%)
Query: 61 WTAKQNKLFENALAIYDKDTPDRWHNLARAVGGKTVEEVK---RHY-------EMLAEDV 110
WT ++ LFE LA + + RW ++AR +G ++V +VK RHY E ++
Sbjct: 112 WTKEEKNLFEQGLATFGR----RWTSIARLIGSRSVLQVKNYARHYFKNKCKLEGFVKEE 167
Query: 111 SRIEAGEIP-LPDYK 124
++I + +IP L DY+
Sbjct: 168 AKIGSLQIPNLQDYE 182
>sp|Q54Z40|MYBH_DICDI Myb-like protein H OS=Dictyostelium discoideum GN=mybH PE=3 SV=1
Length = 1217
Score = 35.8 bits (81), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 55 GIGRSTWTAKQNKLFENALAIYDKDTPDRWHNLARAVGGKTVEEVKRHYEMLA 107
G RS+WT ++ +LF A +YDKD + V KT+ +V+ H + A
Sbjct: 147 GATRSSWTKEEERLFVEAYKLYDKDN----KKIQEHVKTKTILQVRSHAQKFA 195
>sp|Q5F3F2|MYSM1_CHICK Histone H2A deubiquitinase MYSM1 OS=Gallus gallus GN=MYSM1 PE=2
SV=1
Length = 832
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 26/42 (61%), Gaps = 4/42 (9%)
Query: 61 WTAKQNKLFENALAIYDKDTPDRWHNLARAVGGKTVEEVKRH 102
WT+++ +LFE L Y + RW +A+ +G +TV +VK +
Sbjct: 122 WTSEEKELFEQGLVKYGR----RWTKIAKLIGSRTVLQVKSY 159
>sp|Q6R0H0|ASG4_ARATH Transcription factor ASG4 OS=Arabidopsis thaliana GN=ASG4 PE=2 SV=1
Length = 287
Score = 33.9 bits (76), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Query: 57 GRSTWTAKQNKLFENALAIYDKDTPDRWHNLARAVGGKTVEEVKRHYE 104
R WT +++ F AL ++D+D W + VG KTV +++ H +
Sbjct: 60 SRENWTEQEHDKFLEALHLFDRD----WKKIKAFVGSKTVIQIRSHAQ 103
>sp|Q5RGA4|MYSM1_DANRE Histone H2A deubiquitinase MYSM1 OS=Danio rerio GN=mysm1 PE=2 SV=2
Length = 822
Score = 33.1 bits (74), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 29/51 (56%), Gaps = 4/51 (7%)
Query: 52 FRNGIGRSTWTAKQNKLFENALAIYDKDTPDRWHNLARAVGGKTVEEVKRH 102
++ ++ W ++ +LFE LA + + RW +A+ +G +TV +VK +
Sbjct: 93 VKSSAAQTRWAEEEKELFEKGLAQFGR----RWTKIAKLIGTRTVLQVKSY 139
>sp|Q5VVJ2|MYSM1_HUMAN Histone H2A deubiquitinase MYSM1 OS=Homo sapiens GN=MYSM1 PE=1 SV=1
Length = 828
Score = 32.7 bits (73), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 26/42 (61%), Gaps = 4/42 (9%)
Query: 61 WTAKQNKLFENALAIYDKDTPDRWHNLARAVGGKTVEEVKRH 102
WT ++ +LFE LA + + RW +++ +G +TV +VK +
Sbjct: 121 WTIEEKELFEQGLAKFGR----RWTKISKLIGSRTVLQVKSY 158
>sp|Q8BXJ2|TREF1_MOUSE Transcriptional-regulating factor 1 OS=Mus musculus GN=Trerf1 PE=1
SV=1
Length = 1205
Score = 31.2 bits (69), Expect = 2.3, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Query: 57 GRSTWTAKQNKLFENALAIYDKDTPDRWHNLARAVGGKTVEEVKRHY 103
G WT+ + KLF ALA Y KD + + + V KTV + +Y
Sbjct: 892 GSDKWTSLERKLFNKALATYSKD----FIFVQKMVKSKTVAQCVEYY 934
>sp|Q96PN7|TREF1_HUMAN Transcriptional-regulating factor 1 OS=Homo sapiens GN=TRERF1 PE=1
SV=1
Length = 1200
Score = 31.2 bits (69), Expect = 2.3, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Query: 57 GRSTWTAKQNKLFENALAIYDKDTPDRWHNLARAVGGKTVEEVKRHY 103
G WT+ + KLF ALA Y KD + + + V KTV + +Y
Sbjct: 886 GSDKWTSLERKLFNKALATYSKD----FIFVQKMVKSKTVAQCVEYY 928
>sp|Q6P0N0|M18BP_HUMAN Mis18-binding protein 1 OS=Homo sapiens GN=MIS18BP1 PE=1 SV=1
Length = 1132
Score = 31.2 bits (69), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 61 WTAKQNKLFENALAIYDKDTPDRWHNLARAVGGKTVEEVKRHY 103
W K+ + A A K P W +A AVG ++ EE +R Y
Sbjct: 880 WNEKELQKLHCAFASLPKHKPGFWSEVAAAVGSRSPEECQRKY 922
>sp|Q69Z66|MYSM1_MOUSE Histone H2A deubiquitinase MYSM1 OS=Mus musculus GN=Mysm1 PE=2 SV=2
Length = 819
Score = 30.8 bits (68), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 12/87 (13%)
Query: 61 WTAKQNKLFENALAIYDKDTPDRWHNLARAVGGKTVEEVKRHYEMLAEDVSRIEAGEIPL 120
WT ++ +LFE LA + + RW +A + +TV +VK + ++ +
Sbjct: 118 WTVEEKELFEQGLAKFGR----RWTKIATLLKSRTVLQVKSYARQYFKNKVKW------- 166
Query: 121 PDYKKIGGTNKAHSYINMDNEEQRLKT 147
D +K T K+ S + + N++ R K
Sbjct: 167 -DVEKETPTQKSSSDLQVKNKDDRTKA 192
>sp|Q9SFD5|TAD2A_ARATH Transcriptional adapter ADA2a OS=Arabidopsis thaliana GN=ADA2A PE=1
SV=1
Length = 548
Score = 30.4 bits (67), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 8/73 (10%)
Query: 59 STWTAKQNKLFENALAIYDKDTPDRWHNLARAVGGKTVEEVKRHYEMLAEDVSRIEAGEI 118
S W A + L A+A Y W +A VG KT E +H+ + + +++
Sbjct: 109 SDWNADEEILLLEAIATYGFGN---WKEVADHVGSKTTTECIKHF-----NSAYMQSPCF 160
Query: 119 PLPDYKKIGGTNK 131
PLPD G +K
Sbjct: 161 PLPDLSHTIGKSK 173
>sp|P05461|VSID_BPP4 Glycoprotein 3 OS=Enterobacteria phage P4 GN=sid PE=4 SV=2
Length = 244
Score = 30.4 bits (67), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Query: 63 AKQNKLFENALAIYDKDTPDRWHNLARAVGGKTVEEVK-RHYEMLA 107
A+Q K NALA D + D W RA GG +E+K RH E +A
Sbjct: 41 AEQEK---NALAQADGNDADDWRTAFRAAGGVLSDELKQRHIERVA 83
>sp|B1M584|QUEA_METRJ S-adenosylmethionine:tRNA ribosyltransferase-isomerase
OS=Methylobacterium radiotolerans (strain ATCC 27329 /
DSM 1819 / JCM 2831) GN=queA PE=3 SV=1
Length = 354
Score = 30.0 bits (66), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 78 KDTPDRWHNLARAVGGKTVEEVKRHYEMLAEDVSRIEAGEI 118
++ PDRW AR T + R ++ A + + EAGEI
Sbjct: 88 REAPDRWRAFARPAKRLTAGDALRFGDLTATVLEKAEAGEI 128
>sp|Q9S7L2|MYB98_ARATH Transcription factor MYB98 OS=Arabidopsis thaliana GN=MYB98 PE=2
SV=1
Length = 427
Score = 29.6 bits (65), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 12/52 (23%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 52 FRNGIGRSTWTAKQNKLFENALAIYDKDTPDRWHNLARAVGGKTVEEVKRHY 103
R I + TW+ +++++ L + K+ ++W +A+ + G+T +K H+
Sbjct: 263 LRPDIKKETWSEEEDRV----LIEFHKEIGNKWAEIAKRLPGRTENSIKNHW 310
>sp|A1BEZ2|SAHH_CHLPD Adenosylhomocysteinase OS=Chlorobium phaeobacteroides (strain DSM
266) GN=ahcY PE=3 SV=1
Length = 471
Score = 29.6 bits (65), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 4/49 (8%)
Query: 64 KQNKLFENALAIYDKDTPDRWHNLA---RAVGGKTVEEVKRHYEMLAED 109
++ LF+ +Y++D+ RWHN+A + V +T V R Y+M+ ++
Sbjct: 164 EEKALFQQLREVYEEDS-QRWHNVAAEMKGVSEETTTGVHRLYQMMEKE 211
>sp|Q28E45|MCM10_XENTR Protein MCM10 homolog OS=Xenopus tropicalis GN=mcm10 PE=2 SV=1
Length = 845
Score = 29.3 bits (64), Expect = 8.5, Method: Composition-based stats.
Identities = 16/72 (22%), Positives = 34/72 (47%)
Query: 75 IYDKDTPDRWHNLARAVGGKTVEEVKRHYEMLAEDVSRIEAGEIPLPDYKKIGGTNKAHS 134
++D D +H +TV+ V+ +++ L D+ I E PD KK + S
Sbjct: 41 LFDGDEDGSYHESDNGTEEQTVDGVEENFDTLFGDIDDINEEETVAPDTKKQSSVCQDKS 100
Query: 135 YINMDNEEQRLK 146
+++E ++++
Sbjct: 101 KHELEDELRKMQ 112
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.136 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,361,514
Number of Sequences: 539616
Number of extensions: 2289710
Number of successful extensions: 5869
Number of sequences better than 100.0: 45
Number of HSP's better than 100.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 5829
Number of HSP's gapped (non-prelim): 55
length of query: 153
length of database: 191,569,459
effective HSP length: 107
effective length of query: 46
effective length of database: 133,830,547
effective search space: 6156205162
effective search space used: 6156205162
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.2 bits)