BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041479
(771 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 126/443 (28%), Positives = 184/443 (41%), Gaps = 79/443 (17%)
Query: 46 VILLNLSGQNLTGTASPYIGNL-----TFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFN 100
++ L+LS N +G P + NL L+ + LQ N F+ IP + L + +
Sbjct: 367 LLTLDLSSNNFSG---PILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLS 423
Query: 101 SNALQGQIP----------DSRLILNKLEGNIPSEXXXXXXXXXXXXANNYFTGPIPHLN 150
N L G IP D +L LN LEG IP E + L
Sbjct: 424 FNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMY-----------------VKTLE 466
Query: 151 MFQVSVYSLTGSIPIQLLNITSMEYFHVSENQLVGELPPHIGFTLPNVRILLLAGNQFFG 210
+ LTG IP L N T++ + +S N+L GE+P IG L N+ IL L+ N F G
Sbjct: 467 TLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIG-RLENLAILKLSNNSFSG 525
Query: 211 NIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYXXXXXXXXXXXXGTLPNSLANF 270
NIP + + L WLD N G IP + G + ANF
Sbjct: 526 NIPAELGDCRSLIWLDLNTNLFNGTIPAAM----------------FKQSGKIA---ANF 566
Query: 271 SSHLRYLYMSANPISGSIPTEIGNLKNLX--XXXXXXXXXXRNIPISVGYLLKLQVLSLF 328
+ RY+Y+ + + GNL RN + F
Sbjct: 567 IAGKRYVYIKNDGMKKEC-HGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTF 625
Query: 329 ENNISREIPSSLGNFTFLTELNLCGNSIRGSVPSALGSCHQLW-LDLSHNHLTGPIPLAV 387
+NN G+ FL ++ N + G +P +GS L+ L+L HN ++G IP V
Sbjct: 626 DNN---------GSMMFL---DMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEV 673
Query: 388 GNPKSIPHLDLSKNELSGEIPSSLAWIFGYISIFAKLNLSYNNLDGDVPRKMIFKNASAI 447
G+ + + LDLS N+L G IP +++ +++ +++LS NNL G +P F+
Sbjct: 674 GDLRGLNILDLSSNKLDGRIPQAMS----ALTMLTEIDLSNNNLSGPIPEMGQFETFPPA 729
Query: 448 SEAGNEKLCGGISELKLPPCTPS 470
N LCG LP C PS
Sbjct: 730 KFLNNPGLCG----YPLPRCDPS 748
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 118/426 (27%), Positives = 179/426 (42%), Gaps = 68/426 (15%)
Query: 49 LNLSGQNLTGTASPYIGNLTFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNALQGQI 108
L +SG ++G + L +++ NNFS+ IP +G L+H+ + N L G
Sbjct: 180 LAISGNKISGDVD--VSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDF 236
Query: 109 PDSRLILNKLEGNIPSEXXXXXXXXXXXXANNYFTGPIPHLNMFQVSVYSLTGSIPIQLL 168
SR I E ++N F GPIP L P++
Sbjct: 237 --SRAISTCTE------------LKLLNISSNQFVGPIPPL--------------PLK-- 266
Query: 169 NITSMEYFHVSENQLVGELPPHIGFTLPNVRILLLAGNQFFGNIP--------------- 213
S++Y ++EN+ GE+P + + L L+GN F+G +P
Sbjct: 267 ---SLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALS 323
Query: 214 ----------HSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYXXXXXXXXXXXXGTL 263
++ L+ LD + N +G +PE L +L + + L
Sbjct: 324 SNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNL-SASLLTLDLSSNNFSGPIL 382
Query: 264 PNSLANFSSHLRYLYMSANPISGSIPTEIGNLKNLXXXXXXXXXXXRNIPISVGYLLKLQ 323
PN N + L+ LY+ N +G IP + N L IP S+G L KL+
Sbjct: 383 PNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLR 442
Query: 324 VLSLFENNISREIPSSLGNFTFLTELNLCGNSIRGSVPSALGSCHQL-WLDLSHNHLTGP 382
L L+ N + EIP L L L L N + G +PS L +C L W+ LS+N LTG
Sbjct: 443 DLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGE 502
Query: 383 IPLAVGNPKSIPHLDLSKNELSGEIPSSLAWIFGYISIFAKLNLSYNNLDGDVPRKMIFK 442
IP +G +++ L LS N SG IP+ L G L+L+ N +G +P M FK
Sbjct: 503 IPKWIGRLENLAILKLSNNSFSGNIPAEL----GDCRSLIWLDLNTNLFNGTIPAAM-FK 557
Query: 443 NASAIS 448
+ I+
Sbjct: 558 QSGKIA 563
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 126/443 (28%), Positives = 184/443 (41%), Gaps = 79/443 (17%)
Query: 46 VILLNLSGQNLTGTASPYIGNL-----TFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFN 100
++ L+LS N +G P + NL L+ + LQ N F+ IP + L + +
Sbjct: 370 LLTLDLSSNNFSG---PILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLS 426
Query: 101 SNALQGQIPDS----------RLILNKLEGNIPSEXXXXXXXXXXXXANNYFTGPIPHLN 150
N L G IP S +L LN LEG IP E + L
Sbjct: 427 FNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMY-----------------VKTLE 469
Query: 151 MFQVSVYSLTGSIPIQLLNITSMEYFHVSENQLVGELPPHIGFTLPNVRILLLAGNQFFG 210
+ LTG IP L N T++ + +S N+L GE+P IG L N+ IL L+ N F G
Sbjct: 470 TLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIG-RLENLAILKLSNNSFSG 528
Query: 211 NIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYXXXXXXXXXXXXGTLPNSLANF 270
NIP + + L WLD N G IP + G + ANF
Sbjct: 529 NIPAELGDCRSLIWLDLNTNLFNGTIPAAM----------------FKQSGKIA---ANF 569
Query: 271 SSHLRYLYMSANPISGSIPTEIGNLKNLX--XXXXXXXXXXRNIPISVGYLLKLQVLSLF 328
+ RY+Y+ + + GNL RN + F
Sbjct: 570 IAGKRYVYIKNDGMKKEC-HGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTF 628
Query: 329 ENNISREIPSSLGNFTFLTELNLCGNSIRGSVPSALGSCHQLW-LDLSHNHLTGPIPLAV 387
+NN G+ FL ++ N + G +P +GS L+ L+L HN ++G IP V
Sbjct: 629 DNN---------GSMMFL---DMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEV 676
Query: 388 GNPKSIPHLDLSKNELSGEIPSSLAWIFGYISIFAKLNLSYNNLDGDVPRKMIFKNASAI 447
G+ + + LDLS N+L G IP +++ +++ +++LS NNL G +P F+
Sbjct: 677 GDLRGLNILDLSSNKLDGRIPQAMS----ALTMLTEIDLSNNNLSGPIPEMGQFETFPPA 732
Query: 448 SEAGNEKLCGGISELKLPPCTPS 470
N LCG LP C PS
Sbjct: 733 KFLNNPGLCG----YPLPRCDPS 751
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 118/426 (27%), Positives = 179/426 (42%), Gaps = 68/426 (15%)
Query: 49 LNLSGQNLTGTASPYIGNLTFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNALQGQI 108
L +SG ++G + L +++ NNFS+ IP +G L+H+ + N L G
Sbjct: 183 LAISGNKISGDVD--VSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDF 239
Query: 109 PDSRLILNKLEGNIPSEXXXXXXXXXXXXANNYFTGPIPHLNMFQVSVYSLTGSIPIQLL 168
SR I E ++N F GPIP L P++
Sbjct: 240 --SRAISTCTE------------LKLLNISSNQFVGPIPPL--------------PLK-- 269
Query: 169 NITSMEYFHVSENQLVGELPPHIGFTLPNVRILLLAGNQFFGNIP--------------- 213
S++Y ++EN+ GE+P + + L L+GN F+G +P
Sbjct: 270 ---SLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALS 326
Query: 214 ----------HSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYXXXXXXXXXXXXGTL 263
++ L+ LD + N +G +PE L +L + + L
Sbjct: 327 SNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNL-SASLLTLDLSSNNFSGPIL 385
Query: 264 PNSLANFSSHLRYLYMSANPISGSIPTEIGNLKNLXXXXXXXXXXXRNIPISVGYLLKLQ 323
PN N + L+ LY+ N +G IP + N L IP S+G L KL+
Sbjct: 386 PNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLR 445
Query: 324 VLSLFENNISREIPSSLGNFTFLTELNLCGNSIRGSVPSALGSCHQL-WLDLSHNHLTGP 382
L L+ N + EIP L L L L N + G +PS L +C L W+ LS+N LTG
Sbjct: 446 DLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGE 505
Query: 383 IPLAVGNPKSIPHLDLSKNELSGEIPSSLAWIFGYISIFAKLNLSYNNLDGDVPRKMIFK 442
IP +G +++ L LS N SG IP+ L G L+L+ N +G +P M FK
Sbjct: 506 IPKWIGRLENLAILKLSNNSFSGNIPAEL----GDCRSLIWLDLNTNLFNGTIPAAM-FK 560
Query: 443 NASAIS 448
+ I+
Sbjct: 561 QSGKIA 566
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 79/244 (32%), Positives = 119/244 (48%), Gaps = 37/244 (15%)
Query: 535 ATVYKGILDLDQTFIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQ 593
VYKG L D T +AVK L + +G F E + + HRNL+++ C T
Sbjct: 52 GKVYKGRL-ADGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRGFCMTP--- 107
Query: 594 GNYFRALVYEFMHHGSLESCPRI-------LSFLRRLNIAIDVASALEYLHHHCKKPIVH 646
R LVY +M +GS+ SC R L + +R IA+ A L YLH HC I+H
Sbjct: 108 --TERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIH 165
Query: 647 CDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE--------- 697
D+K +N+LLD + A +GDFGL + + + ++GT+G+ PE
Sbjct: 166 RDVKAANILLDEEFEAVVGDFGLAKLMD---YKDXHVXXAVRGTIGHIAPEYLSTGKSSE 222
Query: 698 ------YGILLLEIFTGKRPTSDMFTEGLD----LHNFVKMALPDQILQVLDPLFLVGGV 747
YG++LLE+ TG+R D+ D L ++VK L ++ L+ L + L G
Sbjct: 223 KTDVFGYGVMLLELITGQR-AFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNY 281
Query: 748 QEGE 751
++ E
Sbjct: 282 KDEE 285
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 115/243 (47%), Gaps = 35/243 (14%)
Query: 535 ATVYKGILDLDQTFIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQ 593
VYKG L D +AVK L + +G F E + + HRNL+++ C T
Sbjct: 44 GKVYKGRL-ADGXLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTP--- 99
Query: 594 GNYFRALVYEFMHHGSLESCPRI-------LSFLRRLNIAIDVASALEYLHHHCKKPIVH 646
R LVY +M +GS+ SC R L + +R IA+ A L YLH HC I+H
Sbjct: 100 --TERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIH 157
Query: 647 CDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE--------- 697
D+K +N+LLD + A +GDFGL + + + ++G +G+ PE
Sbjct: 158 RDVKAANILLDEEFEAVVGDFGLAKLMD---YKDXHVXXAVRGXIGHIAPEYLSTGKSSE 214
Query: 698 ------YGILLLEIFTGKRPTSDMFTEGLD---LHNFVKMALPDQILQVLDPLFLVGGVQ 748
YG++LLE+ TG+R D L ++VK L ++ L+ L + L G +
Sbjct: 215 KTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYK 274
Query: 749 EGE 751
+ E
Sbjct: 275 DEE 277
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 103/232 (44%), Gaps = 33/232 (14%)
Query: 261 GTLPNSLANFSSHLRYLYMSANPISGSIPTEIGNLKNLXXXXXXXXXXXRNIPISVGYLL 320
G +P ++A + L YLY++ +SG+IP + +K L +P S+ L
Sbjct: 91 GPIPPAIAKLT-QLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLP 149
Query: 321 KLQVLSLFENNISREIPSSLGNFTFL-TELNLCGNSIRGSVPSALGSCHQLWLDLSHNHL 379
L ++ N IS IP S G+F+ L T + + N + G +P + + ++DLS N L
Sbjct: 150 NLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNML 209
Query: 380 TG-------------PIPLA----------VGNPKSIPHLDLSKNELSGEIPSSLAWIFG 416
G I LA VG K++ LDL N + G +P L
Sbjct: 210 EGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQ--- 266
Query: 417 YISIFAKLNLSYNNLDGDVPRKMIFKNASAISEAGNEKLCGGISELKLPPCT 468
+ LN+S+NNL G++P+ + + A N+ LCG LP CT
Sbjct: 267 -LKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGS----PLPACT 313
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 115/284 (40%), Gaps = 52/284 (18%)
Query: 3 DKQALLAFKSKVDDDPFGALSTWNDSVNFCQ--WLGVTCSLKYQ--RVILLNLSG----- 53
DKQALL K + + LS+W + + C WLGV C Q RV L+LSG
Sbjct: 7 DKQALLQIKKDLGNP--TTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPK 64
Query: 54 ----------------------QNLTGTASPYIGNLTFLRLINLQQNNFSSNIPHEIGRL 91
NL G P I LT L + + N S IP + ++
Sbjct: 65 PYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQI 124
Query: 92 FRLRHIIFNSNALQGQIPDSRLIL----------NKLEGNIP-SEXXXXXXXXXXXXANN 140
L + F+ NAL G +P S L N++ G IP S + N
Sbjct: 125 KTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRN 184
Query: 141 YFTGPIP------HLNMFQVSVYSLTGSIPIQLLNITSMEYFHVSENQLVGELPPHIGFT 194
TG IP +L +S L G + + + + H+++N L +L +G +
Sbjct: 185 RLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLG-KVGLS 243
Query: 195 LPNVRILLLAGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPE 238
N+ L L N+ +G +P ++ L L+ + N+L G IP+
Sbjct: 244 -KNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQ 286
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 100/224 (44%), Gaps = 8/224 (3%)
Query: 163 IPIQLLNITSMEYFHVSE-NQLVGELPPHIGFTLPNVRILLLAGNQFFGNIPHSISNASK 221
IP L N+ + + ++ N LVG +PP I L + L + G IP +S
Sbjct: 68 IPSSLANLPYLNFLYIGGINNLVGPIPPAIA-KLTQLHYLYITHTNVSGAIPDFLSQIKT 126
Query: 222 LEWLDFANNSLTGLIPEDLDSLVNCTYXXXXXXXXXXXXGTLPNSLANFSSHLRYLYMSA 281
L LDF+ N+L+G +P + SL N G +P+S +FS + +S
Sbjct: 127 LVTLDFSYNALSGTLPPSISSLPNLV---GITFDGNRISGAIPDSYGSFSKLFTSMTISR 183
Query: 282 NPISGSIPTEIGNLKNLXXXXXXXXXXXRNIPISVGYLLKLQVLSLFENNISREIPSSLG 341
N ++G IP NL NL + + G Q + L +N+++ ++ +G
Sbjct: 184 NRLTGKIPPTFANL-NLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDL-GKVG 241
Query: 342 NFTFLTELNLCGNSIRGSVPSALGSCHQLW-LDLSHNHLTGPIP 384
L L+L N I G++P L L L++S N+L G IP
Sbjct: 242 LSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP 285
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 96/214 (44%), Gaps = 54/214 (25%)
Query: 532 LVKATVYKGILDLDQTFIAVKVLFLHQRGAL--KSFMAECQALRNIRHRNLVKIITACST 589
+VK +KG D +AVK++ + G++ F E Q + + H LVK CS
Sbjct: 23 VVKLGKWKGQYD-----VAVKMI---KEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSK 74
Query: 590 SDFQGNYFRALVYEFMHHGSLESCPRILSFLRR----------LNIAIDVASALEYLHHH 639
Y +V E++ +G L L++LR L + DV + +L H
Sbjct: 75 -----EYPIYIVTEYISNGCL------LNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESH 123
Query: 640 CKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE-- 697
+H DL N L+D D+ + DFG+TR+ V+ SSVG K V ++ PE
Sbjct: 124 ---QFIHRDLAARNCLVDRDLCVKVSDFGMTRY---VLDDQYVSSVGTKFPVKWSAPEVF 177
Query: 698 -------------YGILLLEIFT-GKRPTSDMFT 717
+GIL+ E+F+ GK P D++T
Sbjct: 178 HYFKYSSKSDVWAFGILMWEVFSLGKMPY-DLYT 210
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 87/197 (44%), Gaps = 32/197 (16%)
Query: 533 VKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
V+ Y + D +AVK L L+ F E + L++++H N+VK C ++
Sbjct: 29 VEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA-- 86
Query: 593 QGNYFRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCK-------KPIV 645
G L+ EF+ +GSL +L++ ID L+Y CK K +
Sbjct: 87 -GRRNLKLIMEFLPYGSLRE------YLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 139
Query: 646 HCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE-------- 697
H DL N+L++N+ +GDFGLT+ +P+ + G YA PE
Sbjct: 140 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTESKFS 198
Query: 698 -------YGILLLEIFT 707
+G++L E+FT
Sbjct: 199 VASDVWSFGVVLYELFT 215
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 88/190 (46%), Gaps = 36/190 (18%)
Query: 544 LDQTFIAVKVLFLHQRGAL--KSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALV 601
L++ +A+K + + GA+ + F+ E + + + H LV++ C Q LV
Sbjct: 29 LNKDKVAIKTI---REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE---QAPI--CLV 80
Query: 602 YEFMHHGSLESCPR----ILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD 657
+EFM HG L R + + L + +DV + YL C ++H DL N L+
Sbjct: 81 FEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVG 137
Query: 658 NDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILL 702
+ + DFG+TRF V+ SS G K V +A+PE +G+L+
Sbjct: 138 ENQVIKVSDFGMTRF---VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLM 194
Query: 703 LEIFT-GKRP 711
E+F+ GK P
Sbjct: 195 WEVFSEGKIP 204
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 88/190 (46%), Gaps = 36/190 (18%)
Query: 544 LDQTFIAVKVLFLHQRGAL--KSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALV 601
L++ +A+K + + GA+ + F+ E + + + H LV++ C Q LV
Sbjct: 27 LNKDKVAIKTI---REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE---QAPI--CLV 78
Query: 602 YEFMHHGSLESCPR----ILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD 657
+EFM HG L R + + L + +DV + YL C ++H DL N L+
Sbjct: 79 FEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVG 135
Query: 658 NDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILL 702
+ + DFG+TRF V+ SS G K V +A+PE +G+L+
Sbjct: 136 ENQVIKVSDFGMTRF---VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLM 192
Query: 703 LEIFT-GKRP 711
E+F+ GK P
Sbjct: 193 WEVFSEGKIP 202
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 88/190 (46%), Gaps = 36/190 (18%)
Query: 544 LDQTFIAVKVLFLHQRGAL--KSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALV 601
L++ +A+K + + GA+ + F+ E + + + H LV++ C Q LV
Sbjct: 32 LNKDKVAIKTI---REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE---QAPI--CLV 83
Query: 602 YEFMHHGSLESCPR----ILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD 657
+EFM HG L R + + L + +DV + YL C ++H DL N L+
Sbjct: 84 FEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVG 140
Query: 658 NDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILL 702
+ + DFG+TRF V+ SS G K V +A+PE +G+L+
Sbjct: 141 ENQVIKVSDFGMTRF---VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLM 197
Query: 703 LEIFT-GKRP 711
E+F+ GK P
Sbjct: 198 WEVFSEGKIP 207
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 89/189 (47%), Gaps = 31/189 (16%)
Query: 549 IAVKVLFLHQRGA--LKSFMAECQALRNIRHRNLVKIITACSTS---DFQGNYF-RALVY 602
+AVK+L A + F+ E ++ +RH N+V + A + Y R +Y
Sbjct: 63 VAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLY 122
Query: 603 EFMHH-GSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMT 661
+H G+ E L RRL++A DVA + YLH+ PIVH +LK N+L+D T
Sbjct: 123 RLLHKSGAREQ----LDERRRLSMAYDVAKGMNYLHNR-NPPIVHRNLKSPNLLVDKKYT 177
Query: 662 AHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIF 706
+ DFGL+R + +S SS GT + PE +G++L E+
Sbjct: 178 VKVCDFGLSR----LKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELA 233
Query: 707 TGKRPTSDM 715
T ++P ++
Sbjct: 234 TLQQPWGNL 242
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 92/205 (44%), Gaps = 50/205 (24%)
Query: 535 ATVYKGILDLDQTFIAVKVLF----LHQRGALKSFMAECQALRNIRHRNLVKIITACSTS 590
VYKG ++ T +AVK L + + F E + + +H NLV+++ S
Sbjct: 45 GVVYKGYVN--NTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDG 102
Query: 591 DFQGNYFRALVYEFMHHGSL-------ESCPRILSFLRRLNIAIDVASALEYLH--HHCK 641
D LVY +M +GSL + P LS+ R IA A+ + +LH HH
Sbjct: 103 DD-----LCLVYVYMPNGSLLDRLSCLDGTPP-LSWHMRCKIAQGAANGINFLHENHH-- 154
Query: 642 KPIVHCDLKPSNVLLDNDMTAHMGDFGLTR----FIPEVMSSNQCSSVGLKGTVGYATPE 697
+H D+K +N+LLD TA + DFGL R F VM S + GT Y PE
Sbjct: 155 ---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSR------IVGTTAYMAPE 205
Query: 698 --------------YGILLLEIFTG 708
+G++LLEI TG
Sbjct: 206 ALRGEITPKSDIYSFGVVLLEIITG 230
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 88/189 (46%), Gaps = 31/189 (16%)
Query: 549 IAVKVLFLHQRGA--LKSFMAECQALRNIRHRNLVKIITACSTS---DFQGNYF-RALVY 602
+AVK+L A + F+ E ++ +RH N+V + A + Y R +Y
Sbjct: 63 VAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLY 122
Query: 603 EFMHH-GSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMT 661
+H G+ E L RRL++A DVA + YLH+ PIVH DLK N+L+D T
Sbjct: 123 RLLHKSGAREQ----LDERRRLSMAYDVAKGMNYLHNR-NPPIVHRDLKSPNLLVDKKYT 177
Query: 662 AHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIF 706
+ DFGL+R + +S S GT + PE +G++L E+
Sbjct: 178 VKVCDFGLSR----LKASXFLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELA 233
Query: 707 TGKRPTSDM 715
T ++P ++
Sbjct: 234 TLQQPWGNL 242
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 87/197 (44%), Gaps = 32/197 (16%)
Query: 533 VKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
V+ Y + D +AVK L L+ F E + L++++H N+VK C ++
Sbjct: 33 VEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA-- 90
Query: 593 QGNYFRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCK-------KPIV 645
G L+ E++ +GSL +L++ ID L+Y CK K +
Sbjct: 91 -GRRNLKLIMEYLPYGSLRD------YLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 143
Query: 646 HCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE-------- 697
H DL N+L++N+ +GDFGLT+ +P+ + G YA PE
Sbjct: 144 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTESKFS 202
Query: 698 -------YGILLLEIFT 707
+G++L E+FT
Sbjct: 203 VASDVWSFGVVLYELFT 219
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 87/197 (44%), Gaps = 32/197 (16%)
Query: 533 VKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
V+ Y + D +AVK L L+ F E + L++++H N+VK C ++
Sbjct: 26 VEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA-- 83
Query: 593 QGNYFRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCK-------KPIV 645
G L+ E++ +GSL +L++ ID L+Y CK K +
Sbjct: 84 -GRRNLKLIMEYLPYGSLRD------YLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 136
Query: 646 HCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE-------- 697
H DL N+L++N+ +GDFGLT+ +P+ + G YA PE
Sbjct: 137 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTESKFS 195
Query: 698 -------YGILLLEIFT 707
+G++L E+FT
Sbjct: 196 VASDVWSFGVVLYELFT 212
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 87/197 (44%), Gaps = 32/197 (16%)
Query: 533 VKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
V+ Y + D +AVK L L+ F E + L++++H N+VK C ++
Sbjct: 29 VEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA-- 86
Query: 593 QGNYFRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCK-------KPIV 645
G L+ E++ +GSL +L++ ID L+Y CK K +
Sbjct: 87 -GRRNLKLIMEYLPYGSLRD------YLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 139
Query: 646 HCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE-------- 697
H DL N+L++N+ +GDFGLT+ +P+ + G YA PE
Sbjct: 140 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTESKFS 198
Query: 698 -------YGILLLEIFT 707
+G++L E+FT
Sbjct: 199 VASDVWSFGVVLYELFT 215
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 87/197 (44%), Gaps = 32/197 (16%)
Query: 533 VKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
V+ Y + D +AVK L L+ F E + L++++H N+VK C ++
Sbjct: 57 VEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA-- 114
Query: 593 QGNYFRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCK-------KPIV 645
G L+ E++ +GSL +L++ ID L+Y CK K +
Sbjct: 115 -GRRNLKLIMEYLPYGSLRD------YLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 167
Query: 646 HCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE-------- 697
H DL N+L++N+ +GDFGLT+ +P+ + G YA PE
Sbjct: 168 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTESKFS 226
Query: 698 -------YGILLLEIFT 707
+G++L E+FT
Sbjct: 227 VASDVWSFGVVLYELFT 243
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 87/197 (44%), Gaps = 32/197 (16%)
Query: 533 VKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
V+ Y + D +AVK L L+ F E + L++++H N+VK C ++
Sbjct: 30 VEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA-- 87
Query: 593 QGNYFRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCK-------KPIV 645
G L+ E++ +GSL +L++ ID L+Y CK K +
Sbjct: 88 -GRRNLKLIMEYLPYGSLRD------YLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 140
Query: 646 HCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE-------- 697
H DL N+L++N+ +GDFGLT+ +P+ + G YA PE
Sbjct: 141 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTESKFS 199
Query: 698 -------YGILLLEIFT 707
+G++L E+FT
Sbjct: 200 VASDVWSFGVVLYELFT 216
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 87/197 (44%), Gaps = 32/197 (16%)
Query: 533 VKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
V+ Y + D +AVK L L+ F E + L++++H N+VK C ++
Sbjct: 31 VEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA-- 88
Query: 593 QGNYFRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCK-------KPIV 645
G L+ E++ +GSL +L++ ID L+Y CK K +
Sbjct: 89 -GRRNLKLIMEYLPYGSLRD------YLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 141
Query: 646 HCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE-------- 697
H DL N+L++N+ +GDFGLT+ +P+ + G YA PE
Sbjct: 142 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTESKFS 200
Query: 698 -------YGILLLEIFT 707
+G++L E+FT
Sbjct: 201 VASDVWSFGVVLYELFT 217
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 87/197 (44%), Gaps = 32/197 (16%)
Query: 533 VKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
V+ Y + D +AVK L L+ F E + L++++H N+VK C ++
Sbjct: 32 VEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA-- 89
Query: 593 QGNYFRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCK-------KPIV 645
G L+ E++ +GSL +L++ ID L+Y CK K +
Sbjct: 90 -GRRNLKLIMEYLPYGSLRD------YLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 142
Query: 646 HCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE-------- 697
H DL N+L++N+ +GDFGLT+ +P+ + G YA PE
Sbjct: 143 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTESKFS 201
Query: 698 -------YGILLLEIFT 707
+G++L E+FT
Sbjct: 202 VASDVWSFGVVLYELFT 218
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 87/197 (44%), Gaps = 32/197 (16%)
Query: 533 VKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
V+ Y + D +AVK L L+ F E + L++++H N+VK C ++
Sbjct: 25 VEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA-- 82
Query: 593 QGNYFRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCK-------KPIV 645
G L+ E++ +GSL +L++ ID L+Y CK K +
Sbjct: 83 -GRRNLKLIMEYLPYGSLRD------YLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 135
Query: 646 HCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE-------- 697
H DL N+L++N+ +GDFGLT+ +P+ + G YA PE
Sbjct: 136 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTESKFS 194
Query: 698 -------YGILLLEIFT 707
+G++L E+FT
Sbjct: 195 VASDVWSFGVVLYELFT 211
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 87/197 (44%), Gaps = 32/197 (16%)
Query: 533 VKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
V+ Y + D +AVK L L+ F E + L++++H N+VK C ++
Sbjct: 26 VEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA-- 83
Query: 593 QGNYFRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCK-------KPIV 645
G L+ E++ +GSL +L++ ID L+Y CK K +
Sbjct: 84 -GRRNLKLIMEYLPYGSLRD------YLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 136
Query: 646 HCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE-------- 697
H DL N+L++N+ +GDFGLT+ +P+ + G YA PE
Sbjct: 137 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTESKFS 195
Query: 698 -------YGILLLEIFT 707
+G++L E+FT
Sbjct: 196 VASDVWSFGVVLYELFT 212
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 87/197 (44%), Gaps = 32/197 (16%)
Query: 533 VKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
V+ Y + D +AVK L L+ F E + L++++H N+VK C ++
Sbjct: 44 VEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA-- 101
Query: 593 QGNYFRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCK-------KPIV 645
G L+ E++ +GSL +L++ ID L+Y CK K +
Sbjct: 102 -GRRNLKLIMEYLPYGSLRD------YLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 154
Query: 646 HCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE-------- 697
H DL N+L++N+ +GDFGLT+ +P+ + G YA PE
Sbjct: 155 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTESKFS 213
Query: 698 -------YGILLLEIFT 707
+G++L E+FT
Sbjct: 214 VASDVWSFGVVLYELFT 230
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 87/197 (44%), Gaps = 32/197 (16%)
Query: 533 VKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
V+ Y + D +AVK L L+ F E + L++++H N+VK C ++
Sbjct: 24 VEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA-- 81
Query: 593 QGNYFRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCK-------KPIV 645
G L+ E++ +GSL +L++ ID L+Y CK K +
Sbjct: 82 -GRRNLKLIMEYLPYGSLRD------YLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 134
Query: 646 HCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE-------- 697
H DL N+L++N+ +GDFGLT+ +P+ + G YA PE
Sbjct: 135 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTESKFS 193
Query: 698 -------YGILLLEIFT 707
+G++L E+FT
Sbjct: 194 VASDVWSFGVVLYELFT 210
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 87/197 (44%), Gaps = 32/197 (16%)
Query: 533 VKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
V+ Y + D +AVK L L+ F E + L++++H N+VK C ++
Sbjct: 44 VEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA-- 101
Query: 593 QGNYFRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCK-------KPIV 645
G L+ E++ +GSL +L++ ID L+Y CK K +
Sbjct: 102 -GRRNLKLIMEYLPYGSLRD------YLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 154
Query: 646 HCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE-------- 697
H DL N+L++N+ +GDFGLT+ +P+ + G YA PE
Sbjct: 155 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTESKFS 213
Query: 698 -------YGILLLEIFT 707
+G++L E+FT
Sbjct: 214 VASDVWSFGVVLYELFT 230
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 107/234 (45%), Gaps = 39/234 (16%)
Query: 533 VKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
V VYKG+L D +A+K ++ F E + L RH +LV +I C +
Sbjct: 51 VFGKVYKGVLR-DGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNE 109
Query: 593 QGNYFRALVYEFMHHGSLE------SCPRI-LSFLRRLNIAIDVASALEYLHHHCKKPIV 645
L+Y++M +G+L+ P + +S+ +RL I I A L YLH + I+
Sbjct: 110 M-----ILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH---TRAII 161
Query: 646 HCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPEY------- 698
H D+K N+LLD + + DFG+++ E+ ++ V KGT+GY PEY
Sbjct: 162 HRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVV--KGTLGYIDPEYFIKGRLT 219
Query: 699 --------GILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPD----QILQVLDP 740
G++L E+ + ++ N + A+ Q+ Q++DP
Sbjct: 220 EKSDVYSFGVVLFEVLCARSAIVQSLPR--EMVNLAEWAVESHNNGQLEQIVDP 271
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 87/190 (45%), Gaps = 36/190 (18%)
Query: 544 LDQTFIAVKVLFLHQRGALKS--FMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALV 601
L++ +A+K + + G++ F+ E + + + H LV++ C Q LV
Sbjct: 49 LNKDKVAIKTI---KEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLE---QAPI--CLV 100
Query: 602 YEFMHHGSLESCPR----ILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD 657
+EFM HG L R + + L + +DV + YL C ++H DL N L+
Sbjct: 101 FEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVG 157
Query: 658 NDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILL 702
+ + DFG+TRF V+ SS G K V +A+PE +G+L+
Sbjct: 158 ENQVIKVSDFGMTRF---VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLM 214
Query: 703 LEIFT-GKRP 711
E+F+ GK P
Sbjct: 215 WEVFSEGKIP 224
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 87/190 (45%), Gaps = 36/190 (18%)
Query: 544 LDQTFIAVKVLFLHQRGAL--KSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALV 601
L++ +A+K + + GA+ + F+ E + + + H LV++ C Q LV
Sbjct: 30 LNKDKVAIKTI---REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE---QAPI--CLV 81
Query: 602 YEFMHHGSLESCPR----ILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD 657
EFM HG L R + + L + +DV + YL C ++H DL N L+
Sbjct: 82 TEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEAC---VIHRDLAARNCLVG 138
Query: 658 NDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILL 702
+ + DFG+TRF V+ SS G K V +A+PE +G+L+
Sbjct: 139 ENQVIKVSDFGMTRF---VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLM 195
Query: 703 LEIFT-GKRP 711
E+F+ GK P
Sbjct: 196 WEVFSEGKIP 205
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 107/234 (45%), Gaps = 39/234 (16%)
Query: 533 VKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
V VYKG+L D +A+K ++ F E + L RH +LV +I C +
Sbjct: 51 VFGKVYKGVLR-DGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNE 109
Query: 593 QGNYFRALVYEFMHHGSLE------SCPRI-LSFLRRLNIAIDVASALEYLHHHCKKPIV 645
L+Y++M +G+L+ P + +S+ +RL I I A L YLH + I+
Sbjct: 110 M-----ILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH---TRAII 161
Query: 646 HCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPEY------- 698
H D+K N+LLD + + DFG+++ E+ ++ V KGT+GY PEY
Sbjct: 162 HRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVV--KGTLGYIDPEYFIKGRLT 219
Query: 699 --------GILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPD----QILQVLDP 740
G++L E+ + ++ N + A+ Q+ Q++DP
Sbjct: 220 EKSDVYSFGVVLFEVLCARSAIVQSLPR--EMVNLAEWAVESHNNGQLEQIVDP 271
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 92/205 (44%), Gaps = 38/205 (18%)
Query: 535 ATVYKGILDLDQTFIAVKVLFLHQRG--ALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
TVYKG D +AVK+L + L++F E LR RH N++ + +
Sbjct: 22 GTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQL 78
Query: 593 QGNYFRALVYEFMHHGSLESCPRILS----FLRRLNIAIDVASALEYLHHHCKKPIVHCD 648
A+V ++ SL I+ ++ ++IA A ++YLH K I+H D
Sbjct: 79 ------AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 129
Query: 649 LKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE----------- 697
LK +N+ L D+T +GDFGL S+Q L G++ + PE
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ--LSGSILWMAPEVIRMQDKNPYS 187
Query: 698 -------YGILLLEIFTGKRPTSDM 715
+GI+L E+ TG+ P S++
Sbjct: 188 FQSDVYAFGIVLYELMTGQLPYSNI 212
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 92/205 (44%), Gaps = 38/205 (18%)
Query: 535 ATVYKGILDLDQTFIAVKVLFLHQRG--ALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
TVYKG D +AVK+L + L++F E LR RH N++ + +
Sbjct: 27 GTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL 83
Query: 593 QGNYFRALVYEFMHHGSLESCPRILS----FLRRLNIAIDVASALEYLHHHCKKPIVHCD 648
A+V ++ SL I+ ++ ++IA A ++YLH K I+H D
Sbjct: 84 ------AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 134
Query: 649 LKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE----------- 697
LK +N+ L D+T +GDFGL S+Q L G++ + PE
Sbjct: 135 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ--LSGSILWMAPEVIRMQDKNPYS 192
Query: 698 -------YGILLLEIFTGKRPTSDM 715
+GI+L E+ TG+ P S++
Sbjct: 193 FQSDVYAFGIVLYELMTGQLPYSNI 217
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 92/205 (44%), Gaps = 38/205 (18%)
Query: 535 ATVYKGILDLDQTFIAVKVLFLHQRG--ALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
TVYKG D +AVK+L + L++F E LR RH N++ + +
Sbjct: 22 GTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL 78
Query: 593 QGNYFRALVYEFMHHGSLESCPRILS----FLRRLNIAIDVASALEYLHHHCKKPIVHCD 648
A+V ++ SL I+ ++ ++IA A ++YLH K I+H D
Sbjct: 79 ------AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 129
Query: 649 LKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE----------- 697
LK +N+ L D+T +GDFGL S+Q L G++ + PE
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ--LSGSILWMAPEVIRMQDKNPYS 187
Query: 698 -------YGILLLEIFTGKRPTSDM 715
+GI+L E+ TG+ P S++
Sbjct: 188 FQSDVYAFGIVLYELMTGQLPYSNI 212
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 92/205 (44%), Gaps = 38/205 (18%)
Query: 535 ATVYKGILDLDQTFIAVKVLFLHQRG--ALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
TVYKG D +AVK+L + L++F E LR RH N++ + +
Sbjct: 24 GTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL 80
Query: 593 QGNYFRALVYEFMHHGSLESCPRILS----FLRRLNIAIDVASALEYLHHHCKKPIVHCD 648
A+V ++ SL I+ ++ ++IA A ++YLH K I+H D
Sbjct: 81 ------AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 131
Query: 649 LKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE----------- 697
LK +N+ L D+T +GDFGL S+Q L G++ + PE
Sbjct: 132 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ--LSGSILWMAPEVIRMQDKNPYS 189
Query: 698 -------YGILLLEIFTGKRPTSDM 715
+GI+L E+ TG+ P S++
Sbjct: 190 FQSDVYAFGIVLYELMTGQLPYSNI 214
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 91/205 (44%), Gaps = 50/205 (24%)
Query: 535 ATVYKGILDLDQTFIAVKVLF----LHQRGALKSFMAECQALRNIRHRNLVKIITACSTS 590
VYKG ++ T +AVK L + + F E + + +H NLV+++ S
Sbjct: 45 GVVYKGYVN--NTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDG 102
Query: 591 DFQGNYFRALVYEFMHHGSL-------ESCPRILSFLRRLNIAIDVASALEYLH--HHCK 641
D LVY +M +GSL + P LS+ R IA A+ + +LH HH
Sbjct: 103 DD-----LCLVYVYMPNGSLLDRLSCLDGTPP-LSWHMRCKIAQGAANGINFLHENHH-- 154
Query: 642 KPIVHCDLKPSNVLLDNDMTAHMGDFGLTR----FIPEVMSSNQCSSVGLKGTVGYATPE 697
+H D+K +N+LLD TA + DFGL R F VM + GT Y PE
Sbjct: 155 ---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXR------IVGTTAYMAPE 205
Query: 698 --------------YGILLLEIFTG 708
+G++LLEI TG
Sbjct: 206 ALRGEITPKSDIYSFGVVLLEIITG 230
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 92/205 (44%), Gaps = 38/205 (18%)
Query: 535 ATVYKGILDLDQTFIAVKVLFLHQRG--ALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
TVYKG D +AVK+L + L++F E LR RH N++ + +
Sbjct: 27 GTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL 83
Query: 593 QGNYFRALVYEFMHHGSLESCPRILS----FLRRLNIAIDVASALEYLHHHCKKPIVHCD 648
A+V ++ SL I+ ++ ++IA A ++YLH K I+H D
Sbjct: 84 ------AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 134
Query: 649 LKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE----------- 697
LK +N+ L D+T +GDFGL S+Q L G++ + PE
Sbjct: 135 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ--LSGSILWMAPEVIRMQDKNPYS 192
Query: 698 -------YGILLLEIFTGKRPTSDM 715
+GI+L E+ TG+ P S++
Sbjct: 193 FQSDVYAFGIVLYELMTGQLPYSNI 217
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 87/197 (44%), Gaps = 32/197 (16%)
Query: 533 VKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
V+ Y + D +AVK L L+ F E + L++++H N+VK C ++
Sbjct: 26 VEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA-- 83
Query: 593 QGNYFRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCK-------KPIV 645
G L+ E++ +GSL +L++ ID L+Y CK K +
Sbjct: 84 -GRRNLKLIMEYLPYGSLRD------YLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 136
Query: 646 HCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE-------- 697
H DL N+L++N+ +GDFGLT+ +P+ + G YA PE
Sbjct: 137 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYA-PESLTESKFS 195
Query: 698 -------YGILLLEIFT 707
+G++L E+FT
Sbjct: 196 VASDVWSFGVVLYELFT 212
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 91/205 (44%), Gaps = 50/205 (24%)
Query: 535 ATVYKGILDLDQTFIAVKVLF----LHQRGALKSFMAECQALRNIRHRNLVKIITACSTS 590
VYKG ++ T +AVK L + + F E + + +H NLV+++ S
Sbjct: 39 GVVYKGYVN--NTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDG 96
Query: 591 DFQGNYFRALVYEFMHHGSL-------ESCPRILSFLRRLNIAIDVASALEYLH--HHCK 641
D LVY +M +GSL + P LS+ R IA A+ + +LH HH
Sbjct: 97 DD-----LCLVYVYMPNGSLLDRLSCLDGTPP-LSWHMRCKIAQGAANGINFLHENHH-- 148
Query: 642 KPIVHCDLKPSNVLLDNDMTAHMGDFGLTR----FIPEVMSSNQCSSVGLKGTVGYATPE 697
+H D+K +N+LLD TA + DFGL R F VM + GT Y PE
Sbjct: 149 ---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXR------IVGTTAYMAPE 199
Query: 698 --------------YGILLLEIFTG 708
+G++LLEI TG
Sbjct: 200 ALRGEITPKSDIYSFGVVLLEIITG 224
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 92/205 (44%), Gaps = 38/205 (18%)
Query: 535 ATVYKGILDLDQTFIAVKVLFLHQRG--ALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
TVYKG D +AVK+L + L++F E LR RH N++ + +
Sbjct: 49 GTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL 105
Query: 593 QGNYFRALVYEFMHHGSLESCPRILS----FLRRLNIAIDVASALEYLHHHCKKPIVHCD 648
A+V ++ SL I+ ++ ++IA A ++YLH K I+H D
Sbjct: 106 ------AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 156
Query: 649 LKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE----------- 697
LK +N+ L D+T +GDFGL S+Q L G++ + PE
Sbjct: 157 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ--LSGSILWMAPEVIRMQDKNPYS 214
Query: 698 -------YGILLLEIFTGKRPTSDM 715
+GI+L E+ TG+ P S++
Sbjct: 215 FQSDVYAFGIVLYELMTGQLPYSNI 239
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 92/205 (44%), Gaps = 38/205 (18%)
Query: 535 ATVYKGILDLDQTFIAVKVLFLHQRG--ALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
TVYKG D +AVK+L + L++F E LR RH N++ + +
Sbjct: 50 GTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL 106
Query: 593 QGNYFRALVYEFMHHGSLESCPRILS----FLRRLNIAIDVASALEYLHHHCKKPIVHCD 648
A+V ++ SL I+ ++ ++IA A ++YLH K I+H D
Sbjct: 107 ------AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 157
Query: 649 LKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE----------- 697
LK +N+ L D+T +GDFGL S+Q L G++ + PE
Sbjct: 158 LKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ--LSGSILWMAPEVIRMQDKNPYS 215
Query: 698 -------YGILLLEIFTGKRPTSDM 715
+GI+L E+ TG+ P S++
Sbjct: 216 FQSDVYAFGIVLYELMTGQLPYSNI 240
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 88/190 (46%), Gaps = 36/190 (18%)
Query: 544 LDQTFIAVKVLFLHQRGAL--KSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALV 601
L++ +A+K + + GA+ + F+ E + + + H LV++ C Q LV
Sbjct: 29 LNKDKVAIKTI---REGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE---QAPI--CLV 80
Query: 602 YEFMHHGSLESCPR----ILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD 657
+EFM HG L R + + L + +DV + YL + ++H DL N L+
Sbjct: 81 FEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EASVIHRDLAARNCLVG 137
Query: 658 NDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILL 702
+ + DFG+TRF V+ SS G K V +A+PE +G+L+
Sbjct: 138 ENQVIKVSDFGMTRF---VLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLM 194
Query: 703 LEIFT-GKRP 711
E+F+ GK P
Sbjct: 195 WEVFSEGKIP 204
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 86/197 (43%), Gaps = 32/197 (16%)
Query: 533 VKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
V+ Y + D +AVK L L+ F E + L++++H N+VK C ++
Sbjct: 29 VEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA-- 86
Query: 593 QGNYFRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCK-------KPIV 645
G L+ E++ +GSL +L+ ID L+Y CK K +
Sbjct: 87 -GRRNLKLIMEYLPYGSLRD------YLQAHAERIDHIKLLQYTSQICKGMEYLGTKRYI 139
Query: 646 HCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE-------- 697
H DL N+L++N+ +GDFGLT+ +P+ + G YA PE
Sbjct: 140 HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYA-PESLTESKFS 198
Query: 698 -------YGILLLEIFT 707
+G++L E+FT
Sbjct: 199 VASDVWSFGVVLYELFT 215
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 65.9 bits (159), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 92/205 (44%), Gaps = 38/205 (18%)
Query: 535 ATVYKGILDLDQTFIAVKVLFLHQRG--ALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
TVYKG D +AVK+L + L++F E LR RH N++ + +
Sbjct: 22 GTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL 78
Query: 593 QGNYFRALVYEFMHHGSLESCPRILS----FLRRLNIAIDVASALEYLHHHCKKPIVHCD 648
A+V ++ SL I+ ++ ++IA A ++YLH K I+H D
Sbjct: 79 ------AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 129
Query: 649 LKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE----------- 697
LK +N+ L D+T +GDFGL S+Q L G++ + PE
Sbjct: 130 LKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQ--LSGSILWMAPEVIRMQDKNPYS 187
Query: 698 -------YGILLLEIFTGKRPTSDM 715
+GI+L E+ TG+ P S++
Sbjct: 188 FQSDVYAFGIVLYELMTGQLPYSNI 212
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 106/229 (46%), Gaps = 61/229 (26%)
Query: 532 LVKATVYKGILDLDQTFIAVKVLFLHQRGAL--KSFMAECQALRNIRHRNLVKIITACST 589
+VK ++G D +A+K++ + G++ F+ E + + N+ H LV++ C+
Sbjct: 39 VVKYGKWRGQYD-----VAIKMI---KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 590 SDFQGNYFRALVYEFMHHGSLESCPRILSFLRR----------LNIAIDVASALEYLHHH 639
Q F ++ E+M +G L L++LR L + DV A+EYL
Sbjct: 91 ---QRPIF--IITEYMANGCL------LNYLREMRHRFQTQQLLEMCKDVCEAMEYLE-- 137
Query: 640 CKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE-- 697
K +H DL N L+++ + DFGL+R+ V+ + SSVG K V ++ PE
Sbjct: 138 -SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRY---VLDDEETSSVGSKFPVRWSPPEVL 193
Query: 698 -------------YGILLLEIFT-GKRP--------TSDMFTEGLDLHN 724
+G+L+ EI++ GK P T++ +GL L+
Sbjct: 194 MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR 242
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 92/205 (44%), Gaps = 38/205 (18%)
Query: 535 ATVYKGILDLDQTFIAVKVLFLHQRG--ALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
TVYKG D +AVK+L + L++F E LR RH N++ + +
Sbjct: 42 GTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL 98
Query: 593 QGNYFRALVYEFMHHGSLESCPRILS----FLRRLNIAIDVASALEYLHHHCKKPIVHCD 648
A+V ++ SL I+ ++ ++IA A ++YLH K I+H D
Sbjct: 99 ------AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 149
Query: 649 LKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE----------- 697
LK +N+ L D+T +GDFGL S+Q L G++ + PE
Sbjct: 150 LKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQ--LSGSILWMAPEVIRMQDKNPYS 207
Query: 698 -------YGILLLEIFTGKRPTSDM 715
+GI+L E+ TG+ P S++
Sbjct: 208 FQSDVYAFGIVLYELMTGQLPYSNI 232
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 92/205 (44%), Gaps = 38/205 (18%)
Query: 535 ATVYKGILDLDQTFIAVKVLFLHQRG--ALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
TVYKG D +AVK+L + L++F E LR RH N++ + +
Sbjct: 50 GTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL 106
Query: 593 QGNYFRALVYEFMHHGSLESCPRILS----FLRRLNIAIDVASALEYLHHHCKKPIVHCD 648
A+V ++ SL I+ ++ ++IA A ++YLH K I+H D
Sbjct: 107 ------AIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRD 157
Query: 649 LKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE----------- 697
LK +N+ L D+T +GDFGL S+Q L G++ + PE
Sbjct: 158 LKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQ--LSGSILWMAPEVIRMQDKNPYS 215
Query: 698 -------YGILLLEIFTGKRPTSDM 715
+GI+L E+ TG+ P S++
Sbjct: 216 FQSDVYAFGIVLYELMTGQLPYSNI 240
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 87/197 (44%), Gaps = 32/197 (16%)
Query: 533 VKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
V+ Y + D +AVK L L+ F E + L++++H N+VK C ++
Sbjct: 27 VEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA-- 84
Query: 593 QGNYFRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCK-------KPIV 645
G L+ E++ +GSL +L++ ID L+Y CK K +
Sbjct: 85 -GRRNLKLIMEYLPYGSLRD------YLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 137
Query: 646 HCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE-------- 697
H +L N+L++N+ +GDFGLT+ +P+ + G YA PE
Sbjct: 138 HRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYA-PESLTESKFS 196
Query: 698 -------YGILLLEIFT 707
+G++L E+FT
Sbjct: 197 VASDVWSFGVVLYELFT 213
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 99/227 (43%), Gaps = 50/227 (22%)
Query: 537 VYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNY 596
VY+G+ +AVK L ++ F+ E ++ I+H NLV+++ C+ + +
Sbjct: 30 VYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR---EPPF 85
Query: 597 FRALVYEFMHHGSLESCPRILSFLRRLN-----------IAIDVASALEYLHHHCKKPIV 645
+ ++ EFM +G+L L +LR N +A ++SA+EYL KK +
Sbjct: 86 Y--IIIEFMTYGNL------LDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFI 134
Query: 646 HCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE-------- 697
H DL N L+ + + DFGL+R + + G K + + PE
Sbjct: 135 HRDLAARNCLVGENHLVKVADFGLSRLM---TGDTXTAHAGAKFPIKWTAPESLAYNKFS 191
Query: 698 -------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQ 736
+G+LL EI T G P G+DL ++ D ++
Sbjct: 192 IKSDVWAFGVLLWEIATYGMSPYP-----GIDLSQVYELLEKDYRME 233
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 89/191 (46%), Gaps = 32/191 (16%)
Query: 537 VYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNY 596
VY+G+ +AVK L ++ F+ E ++ I+H NLV+++ C+ + +
Sbjct: 27 VYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR---EPPF 82
Query: 597 FRALVYEFMHHGSL----ESCPRI-LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKP 651
+ ++ EFM +G+L C R +S + L +A ++SA+EYL KK +H DL
Sbjct: 83 Y--IIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAA 137
Query: 652 SNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE-------------- 697
N L+ + + DFGL+R + + G K + + PE
Sbjct: 138 RNCLVGENHLVKVADFGLSRLM---TGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 194
Query: 698 -YGILLLEIFT 707
+G+LL EI T
Sbjct: 195 AFGVLLWEIAT 205
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 89/191 (46%), Gaps = 32/191 (16%)
Query: 537 VYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNY 596
VY+G+ +AVK L ++ F+ E ++ I+H NLV+++ C+ + +
Sbjct: 27 VYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR---EPPF 82
Query: 597 FRALVYEFMHHGSL----ESCPRI-LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKP 651
+ ++ EFM +G+L C R +S + L +A ++SA+EYL KK +H DL
Sbjct: 83 Y--IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAA 137
Query: 652 SNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE-------------- 697
N L+ + + DFGL+R + + G K + + PE
Sbjct: 138 RNCLVGENHLVKVADFGLSRLM---TGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 194
Query: 698 -YGILLLEIFT 707
+G+LL EI T
Sbjct: 195 AFGVLLWEIAT 205
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 38/221 (17%)
Query: 537 VYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNY 596
VY+G+ +AVK L ++ F+ E ++ I+H NLV+++ C+ + +
Sbjct: 29 VYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR---EPPF 84
Query: 597 FRALVYEFMHHGSL----ESCPRI-LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKP 651
+ ++ EFM +G+L C R +S + L +A ++SA+EYL KK +H DL
Sbjct: 85 Y--IIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAA 139
Query: 652 SNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE-------------- 697
N L+ + + DFGL+R + + G K + + PE
Sbjct: 140 RNCLVGENHLVKVADFGLSRLM---TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 196
Query: 698 -YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQ 736
+G+LL EI T G P G+DL ++ D ++
Sbjct: 197 AFGVLLWEIATYGMSPYP-----GIDLSQVYELLEKDYRME 232
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 38/221 (17%)
Query: 537 VYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNY 596
VY+G+ +AVK L ++ F+ E ++ I+H NLV+++ C+ + +
Sbjct: 34 VYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR---EPPF 89
Query: 597 FRALVYEFMHHGSL----ESCPRI-LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKP 651
+ ++ EFM +G+L C R +S + L +A ++SA+EYL KK +H DL
Sbjct: 90 Y--IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAA 144
Query: 652 SNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE-------------- 697
N L+ + + DFGL+R + + G K + + PE
Sbjct: 145 RNCLVGENHLVKVADFGLSRLM---TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 201
Query: 698 -YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQ 736
+G+LL EI T G P G+DL ++ D ++
Sbjct: 202 AFGVLLWEIATYGMSPYP-----GIDLSQVYELLEKDYRME 237
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 99/227 (43%), Gaps = 50/227 (22%)
Query: 537 VYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNY 596
VY+G+ +AVK L ++ F+ E ++ I+H NLV+++ C+ + +
Sbjct: 30 VYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR---EPPF 85
Query: 597 FRALVYEFMHHGSLESCPRILSFLRRLN-----------IAIDVASALEYLHHHCKKPIV 645
+ ++ EFM +G+L L +LR N +A ++SA+EYL KK +
Sbjct: 86 Y--IITEFMTYGNL------LDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFI 134
Query: 646 HCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE-------- 697
H DL N L+ + + DFGL+R + + G K + + PE
Sbjct: 135 HRDLAARNCLVGENHLVKVADFGLSRLM---TGDTYTAPAGAKFPIKWTAPESLAYNKFS 191
Query: 698 -------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQ 736
+G+LL EI T G P G+DL ++ D ++
Sbjct: 192 IKSDVWAFGVLLWEIATYGMSPYP-----GIDLSQVYELLEKDYRME 233
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 38/221 (17%)
Query: 537 VYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNY 596
VY+G+ +AVK L ++ F+ E ++ I+H NLV+++ C+ + +
Sbjct: 29 VYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR---EPPF 84
Query: 597 FRALVYEFMHHGSL----ESCPRI-LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKP 651
+ ++ EFM +G+L C R +S + L +A ++SA+EYL KK +H DL
Sbjct: 85 Y--IIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAA 139
Query: 652 SNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE-------------- 697
N L+ + + DFGL+R + + G K + + PE
Sbjct: 140 RNCLVGENHLVKVADFGLSRLM---TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 196
Query: 698 -YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQ 736
+G+LL EI T G P G+DL ++ D ++
Sbjct: 197 AFGVLLWEIATYGMSPYP-----GIDLSQVYELLEKDYRME 232
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 99/227 (43%), Gaps = 50/227 (22%)
Query: 537 VYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNY 596
VY+G+ +AVK L ++ F+ E ++ I+H NLV+++ C+ + +
Sbjct: 34 VYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR---EPPF 89
Query: 597 FRALVYEFMHHGSLESCPRILSFLRRLN-----------IAIDVASALEYLHHHCKKPIV 645
+ ++ EFM +G+L L +LR N +A ++SA+EYL KK +
Sbjct: 90 Y--IITEFMTYGNL------LDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFI 138
Query: 646 HCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE-------- 697
H DL N L+ + + DFGL+R + + G K + + PE
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLM---TGDTXTAHAGAKFPIKWTAPESLAYNKFS 195
Query: 698 -------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQ 736
+G+LL EI T G P G+DL ++ D ++
Sbjct: 196 IKSDVWAFGVLLWEIATYGMSPYP-----GIDLSQVYELLEKDYRME 237
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 38/221 (17%)
Query: 537 VYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNY 596
VY+G+ +AVK L ++ F+ E ++ I+H NLV+++ C+ + +
Sbjct: 29 VYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR---EPPF 84
Query: 597 FRALVYEFMHHGSL----ESCPRI-LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKP 651
+ ++ EFM +G+L C R +S + L +A ++SA+EYL KK +H DL
Sbjct: 85 Y--IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAA 139
Query: 652 SNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE-------------- 697
N L+ + + DFGL+R + + G K + + PE
Sbjct: 140 RNCLVGENHLVKVADFGLSRLM---TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 196
Query: 698 -YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQ 736
+G+LL EI T G P G+DL ++ D ++
Sbjct: 197 AFGVLLWEIATYGMSPYP-----GIDLSQVYELLEKDYRME 232
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 99/227 (43%), Gaps = 50/227 (22%)
Query: 537 VYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNY 596
VY+G+ +AVK L ++ F+ E ++ I+H NLV+++ C+ + +
Sbjct: 34 VYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR---EPPF 89
Query: 597 FRALVYEFMHHGSLESCPRILSFLRRLN-----------IAIDVASALEYLHHHCKKPIV 645
+ ++ EFM +G+L L +LR N +A ++SA+EYL KK +
Sbjct: 90 Y--IIIEFMTYGNL------LDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFI 138
Query: 646 HCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE-------- 697
H DL N L+ + + DFGL+R + + G K + + PE
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLM---TGDTYTAHAGAKFPIKWTAPESLAYNKFS 195
Query: 698 -------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQ 736
+G+LL EI T G P G+DL ++ D ++
Sbjct: 196 IKSDVWAFGVLLWEIATYGMSPYP-----GIDLSQVYELLEKDYRME 237
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 99/227 (43%), Gaps = 50/227 (22%)
Query: 537 VYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNY 596
VY+G+ +AVK L ++ F+ E ++ I+H NLV+++ C+ + +
Sbjct: 34 VYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR---EPPF 89
Query: 597 FRALVYEFMHHGSLESCPRILSFLRRLN-----------IAIDVASALEYLHHHCKKPIV 645
+ ++ EFM +G+L L +LR N +A ++SA+EYL KK +
Sbjct: 90 Y--IITEFMTYGNL------LDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFI 138
Query: 646 HCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE-------- 697
H DL N L+ + + DFGL+R + + G K + + PE
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLM---TGDTYTAHAGAKFPIKWTAPESLAYNKFS 195
Query: 698 -------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQ 736
+G+LL EI T G P G+DL ++ D ++
Sbjct: 196 IKSDVWAFGVLLWEIATYGMSPYP-----GIDLSQVYELLEKDYRME 237
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 38/221 (17%)
Query: 537 VYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNY 596
VY+G+ +AVK L ++ F+ E ++ I+H NLV+++ C+ + +
Sbjct: 29 VYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR---EPPF 84
Query: 597 FRALVYEFMHHGSL----ESCPRI-LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKP 651
+ ++ EFM +G+L C R +S + L +A ++SA+EYL KK +H DL
Sbjct: 85 Y--IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAA 139
Query: 652 SNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE-------------- 697
N L+ + + DFGL+R + + G K + + PE
Sbjct: 140 RNCLVGENHLVKVADFGLSRLM---TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 196
Query: 698 -YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQ 736
+G+LL EI T G P G+DL ++ D ++
Sbjct: 197 AFGVLLWEIATYGMSPYP-----GIDLSQVYELLEKDYRME 232
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 99/227 (43%), Gaps = 50/227 (22%)
Query: 537 VYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNY 596
VY+G+ +AVK L ++ F+ E ++ I+H NLV+++ C+ + +
Sbjct: 34 VYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR---EPPF 89
Query: 597 FRALVYEFMHHGSLESCPRILSFLRRLN-----------IAIDVASALEYLHHHCKKPIV 645
+ ++ EFM +G+L L +LR N +A ++SA+EYL KK +
Sbjct: 90 Y--IITEFMTYGNL------LDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFI 138
Query: 646 HCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE-------- 697
H DL N L+ + + DFGL+R + + G K + + PE
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLM---TGDTYTAHAGAKFPIKWTAPESLAYNKFS 195
Query: 698 -------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQ 736
+G+LL EI T G P G+DL ++ D ++
Sbjct: 196 IKSDVWAFGVLLWEIATYGMSPYP-----GIDLSQVYELLEKDYRME 237
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 99/227 (43%), Gaps = 50/227 (22%)
Query: 537 VYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNY 596
VY+G+ +AVK L ++ F+ E ++ I+H NLV+++ C+ + +
Sbjct: 31 VYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR---EPPF 86
Query: 597 FRALVYEFMHHGSLESCPRILSFLRRLN-----------IAIDVASALEYLHHHCKKPIV 645
+ ++ EFM +G+L L +LR N +A ++SA+EYL KK +
Sbjct: 87 Y--IITEFMTYGNL------LDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFI 135
Query: 646 HCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE-------- 697
H DL N L+ + + DFGL+R + + G K + + PE
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRLM---TGDTYTAPAGAKFPIKWTAPESLAYNKFS 192
Query: 698 -------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQ 736
+G+LL EI T G P G+DL ++ D ++
Sbjct: 193 IKSDVWAFGVLLWEIATYGMSPYP-----GIDLSQVYELLEKDYRME 234
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 99/227 (43%), Gaps = 50/227 (22%)
Query: 537 VYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNY 596
VY+G+ +AVK L ++ F+ E ++ I+H NLV+++ C+ + +
Sbjct: 42 VYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR---EPPF 97
Query: 597 FRALVYEFMHHGSLESCPRILSFLRRLN-----------IAIDVASALEYLHHHCKKPIV 645
+ ++ EFM +G+L L +LR N +A ++SA+EYL KK +
Sbjct: 98 Y--IITEFMTYGNL------LDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFI 146
Query: 646 HCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE-------- 697
H DL N L+ + + DFGL+R + + G K + + PE
Sbjct: 147 HRDLAARNCLVGENHLVKVADFGLSRLM---TGDTYTAHAGAKFPIKWTAPESLAYNKFS 203
Query: 698 -------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQ 736
+G+LL EI T G P G+DL ++ D ++
Sbjct: 204 IKSDVWAFGVLLWEIATYGMSPYP-----GIDLSQVYELLEKDYRME 245
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 99/227 (43%), Gaps = 50/227 (22%)
Query: 537 VYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNY 596
VY+G+ +AVK L ++ F+ E ++ I+H NLV+++ C+ + +
Sbjct: 29 VYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR---EPPF 84
Query: 597 FRALVYEFMHHGSLESCPRILSFLRRLN-----------IAIDVASALEYLHHHCKKPIV 645
+ ++ EFM +G+L L +LR N +A ++SA+EYL KK +
Sbjct: 85 Y--IITEFMTYGNL------LDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFI 133
Query: 646 HCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE-------- 697
H DL N L+ + + DFGL+R + + G K + + PE
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLM---TGDTYTAHAGAKFPIKWTAPESLAYNKFS 190
Query: 698 -------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQ 736
+G+LL EI T G P G+DL ++ D ++
Sbjct: 191 IKSDVWAFGVLLWEIATYGMSPYP-----GIDLSQVYELLEKDYRME 232
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 99/227 (43%), Gaps = 50/227 (22%)
Query: 537 VYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNY 596
VY+G+ +AVK L ++ F+ E ++ I+H NLV+++ C+ + +
Sbjct: 33 VYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR---EPPF 88
Query: 597 FRALVYEFMHHGSLESCPRILSFLRRLN-----------IAIDVASALEYLHHHCKKPIV 645
+ ++ EFM +G+L L +LR N +A ++SA+EYL KK +
Sbjct: 89 Y--IITEFMTYGNL------LDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFI 137
Query: 646 HCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE-------- 697
H DL N L+ + + DFGL+R + + G K + + PE
Sbjct: 138 HRDLAARNCLVGENHLVKVADFGLSRLM---TGDTYTAHAGAKFPIKWTAPESLAYNKFS 194
Query: 698 -------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQ 736
+G+LL EI T G P G+DL ++ D ++
Sbjct: 195 IKSDVWAFGVLLWEIATYGMSPYP-----GIDLSQVYELLEKDYRME 236
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 99/227 (43%), Gaps = 50/227 (22%)
Query: 537 VYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNY 596
VY+G+ +AVK L ++ F+ E ++ I+H NLV+++ C+ + +
Sbjct: 31 VYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR---EPPF 86
Query: 597 FRALVYEFMHHGSLESCPRILSFLRRLN-----------IAIDVASALEYLHHHCKKPIV 645
+ ++ EFM +G+L L +LR N +A ++SA+EYL KK +
Sbjct: 87 Y--IITEFMTYGNL------LDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFI 135
Query: 646 HCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE-------- 697
H DL N L+ + + DFGL+R + + G K + + PE
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRLM---TGDTYTAHAGAKFPIKWTAPESLAYNKFS 192
Query: 698 -------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQ 736
+G+LL EI T G P G+DL ++ D ++
Sbjct: 193 IKSDVWAFGVLLWEIATYGMSPYP-----GIDLSQVYELLEKDYRME 234
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 105/229 (45%), Gaps = 61/229 (26%)
Query: 532 LVKATVYKGILDLDQTFIAVKVLFLHQRGAL--KSFMAECQALRNIRHRNLVKIITACST 589
+VK ++G D +A+K++ + G++ F+ E + + N+ H LV++ C+
Sbjct: 39 VVKYGKWRGQYD-----VAIKMI---KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 590 SDFQGNYFRALVYEFMHHGSLESCPRILSFLRR----------LNIAIDVASALEYLHHH 639
Q F ++ E+M +G L L++LR L + DV A+EYL
Sbjct: 91 ---QRPIF--IITEYMANGCL------LNYLREMRHRFQTQQLLEMCKDVCEAMEYLE-- 137
Query: 640 CKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE-- 697
K +H DL N L+++ + DFGL+R+ V+ SSVG K V ++ PE
Sbjct: 138 -SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRY---VLDDEYTSSVGSKFPVRWSPPEVL 193
Query: 698 -------------YGILLLEIFT-GKRP--------TSDMFTEGLDLHN 724
+G+L+ EI++ GK P T++ +GL L+
Sbjct: 194 MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR 242
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 99/227 (43%), Gaps = 50/227 (22%)
Query: 537 VYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNY 596
VY+G+ +AVK L ++ F+ E ++ I+H NLV+++ C+ + +
Sbjct: 31 VYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR---EPPF 86
Query: 597 FRALVYEFMHHGSLESCPRILSFLRRLN-----------IAIDVASALEYLHHHCKKPIV 645
+ ++ EFM +G+L L +LR N +A ++SA+EYL KK +
Sbjct: 87 Y--IITEFMTYGNL------LDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFI 135
Query: 646 HCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE-------- 697
H DL N L+ + + DFGL+R + + G K + + PE
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRLM---TGDTYTAHAGAKFPIKWTAPESLAYNKFS 192
Query: 698 -------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQ 736
+G+LL EI T G P G+DL ++ D ++
Sbjct: 193 IKSDVWAFGVLLWEIATYGMSPYP-----GIDLSQVYELLEKDYRME 234
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 105/229 (45%), Gaps = 61/229 (26%)
Query: 532 LVKATVYKGILDLDQTFIAVKVLFLHQRGAL--KSFMAECQALRNIRHRNLVKIITACST 589
+VK ++G D +A+K++ + G++ F+ E + + N+ H LV++ C+
Sbjct: 24 VVKYGKWRGQYD-----VAIKMI---KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 590 SDFQGNYFRALVYEFMHHGSLESCPRILSFLRR----------LNIAIDVASALEYLHHH 639
Q F ++ E+M +G L L++LR L + DV A+EYL
Sbjct: 76 ---QRPIF--IITEYMANGCL------LNYLREMRHRFQTQQLLEMCKDVCEAMEYLE-- 122
Query: 640 CKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE-- 697
K +H DL N L+++ + DFGL+R+ V+ SSVG K V ++ PE
Sbjct: 123 -SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRY---VLDDEYTSSVGSKFPVRWSPPEVL 178
Query: 698 -------------YGILLLEIFT-GKRP--------TSDMFTEGLDLHN 724
+G+L+ EI++ GK P T++ +GL L+
Sbjct: 179 MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR 227
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 105/229 (45%), Gaps = 61/229 (26%)
Query: 532 LVKATVYKGILDLDQTFIAVKVLFLHQRGAL--KSFMAECQALRNIRHRNLVKIITACST 589
+VK ++G D +A+K++ + G++ F+ E + + N+ H LV++ C+
Sbjct: 23 VVKYGKWRGQYD-----VAIKMI---KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 74
Query: 590 SDFQGNYFRALVYEFMHHGSLESCPRILSFLRR----------LNIAIDVASALEYLHHH 639
Q F ++ E+M +G L L++LR L + DV A+EYL
Sbjct: 75 ---QRPIF--IITEYMANGCL------LNYLREMRHRFQTQQLLEMCKDVCEAMEYLE-- 121
Query: 640 CKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE-- 697
K +H DL N L+++ + DFGL+R+ V+ SSVG K V ++ PE
Sbjct: 122 -SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRY---VLDDEYTSSVGSKFPVRWSPPEVL 177
Query: 698 -------------YGILLLEIFT-GKRP--------TSDMFTEGLDLHN 724
+G+L+ EI++ GK P T++ +GL L+
Sbjct: 178 MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR 226
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 99/227 (43%), Gaps = 50/227 (22%)
Query: 537 VYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNY 596
VY+G+ +AVK L ++ F+ E ++ I+H NLV+++ C+ + +
Sbjct: 29 VYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR---EPPF 84
Query: 597 FRALVYEFMHHGSLESCPRILSFLRRLN-----------IAIDVASALEYLHHHCKKPIV 645
+ ++ EFM +G+L L +LR N +A ++SA+EYL KK +
Sbjct: 85 Y--IITEFMTYGNL------LDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFI 133
Query: 646 HCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE-------- 697
H DL N L+ + + DFGL+R + + G K + + PE
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLM---TGDTYTAHAGAKFPIKWTAPESLAYNKFS 190
Query: 698 -------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQ 736
+G+LL EI T G P G+DL ++ D ++
Sbjct: 191 IKSDVWAFGVLLWEIATYGMSPYP-----GIDLSQVYELLEKDYRME 232
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 105/229 (45%), Gaps = 61/229 (26%)
Query: 532 LVKATVYKGILDLDQTFIAVKVLFLHQRGAL--KSFMAECQALRNIRHRNLVKIITACST 589
+VK ++G D +A+K++ + G++ F+ E + + N+ H LV++ C+
Sbjct: 19 VVKYGKWRGQYD-----VAIKMI---KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 70
Query: 590 SDFQGNYFRALVYEFMHHGSLESCPRILSFLRR----------LNIAIDVASALEYLHHH 639
Q F ++ E+M +G L L++LR L + DV A+EYL
Sbjct: 71 ---QRPIF--IITEYMANGCL------LNYLREMRHRFQTQQLLEMCKDVCEAMEYLE-- 117
Query: 640 CKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE-- 697
K +H DL N L+++ + DFGL+R+ V+ SSVG K V ++ PE
Sbjct: 118 -SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRY---VLDDEYTSSVGSKFPVRWSPPEVL 173
Query: 698 -------------YGILLLEIFT-GKRP--------TSDMFTEGLDLHN 724
+G+L+ EI++ GK P T++ +GL L+
Sbjct: 174 MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR 222
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/229 (26%), Positives = 105/229 (45%), Gaps = 61/229 (26%)
Query: 532 LVKATVYKGILDLDQTFIAVKVLFLHQRGAL--KSFMAECQALRNIRHRNLVKIITACST 589
+VK ++G D +A+K++ + G++ F+ E + + N+ H LV++ C+
Sbjct: 30 VVKYGKWRGQYD-----VAIKMI---KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 81
Query: 590 SDFQGNYFRALVYEFMHHGSLESCPRILSFLRR----------LNIAIDVASALEYLHHH 639
Q F ++ E+M +G L L++LR L + DV A+EYL
Sbjct: 82 ---QRPIF--IITEYMANGCL------LNYLREMRHRFQTQQLLEMCKDVCEAMEYLE-- 128
Query: 640 CKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE-- 697
K +H DL N L+++ + DFGL+R+ V+ SSVG K V ++ PE
Sbjct: 129 -SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRY---VLDDEYTSSVGSKFPVRWSPPEVL 184
Query: 698 -------------YGILLLEIFT-GKRP--------TSDMFTEGLDLHN 724
+G+L+ EI++ GK P T++ +GL L+
Sbjct: 185 MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR 233
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 89/191 (46%), Gaps = 32/191 (16%)
Query: 537 VYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNY 596
VY+G+ +AVK L ++ F+ E ++ I+H NLV+++ C+ + +
Sbjct: 27 VYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR---EPPF 82
Query: 597 FRALVYEFMHHGSL----ESCPRI-LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKP 651
+ ++ EFM +G+L C R +S + L +A ++SA+EYL KK +H DL
Sbjct: 83 Y--IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAA 137
Query: 652 SNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE-------------- 697
N L+ + + DFGL+R + + G K + + PE
Sbjct: 138 RNCLVGENHLVKVADFGLSRLM---TGDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 194
Query: 698 -YGILLLEIFT 707
+G+LL EI T
Sbjct: 195 AFGVLLWEIAT 205
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 100/221 (45%), Gaps = 38/221 (17%)
Query: 537 VYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNY 596
VY+G+ +AVK L ++ F+ E ++ I+H NLV+++ C+ + +
Sbjct: 236 VYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR---EPPF 291
Query: 597 FRALVYEFMHHGS----LESCPRI-LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKP 651
+ ++ EFM +G+ L C R +S + L +A ++SA+EYL KK +H +L
Sbjct: 292 Y--IITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRNLAA 346
Query: 652 SNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE-------------- 697
N L+ + + DFGL+R + + G K + + PE
Sbjct: 347 RNCLVGENHLVKVADFGLSRLM---TGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVW 403
Query: 698 -YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQ 736
+G+LL EI T G P G+DL ++ D ++
Sbjct: 404 AFGVLLWEIATYGMSPYP-----GIDLSQVYELLEKDYRME 439
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 90/207 (43%), Gaps = 42/207 (20%)
Query: 535 ATVYKGILDLDQTFIAVKVLFLHQRG--ALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
TVYKG D +AVK+L + L++F E LR RH N++ + +
Sbjct: 26 GTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL 82
Query: 593 QGNYFRALVYEF------MHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVH 646
A+V ++ HH L + + ++IA A ++YLH K I+H
Sbjct: 83 ------AIVTQWCEGSSLYHH--LHASETKFEMKKLIDIARQTARGMDYLH---AKSIIH 131
Query: 647 CDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE--------- 697
DLK +N+ L D T +GDFGL S+Q L G++ + PE
Sbjct: 132 RDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQ--LSGSILWMAPEVIRMQDSNP 189
Query: 698 ---------YGILLLEIFTGKRPTSDM 715
+GI+L E+ TG+ P S++
Sbjct: 190 YSFQSDVYAFGIVLYELMTGQLPYSNI 216
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/201 (30%), Positives = 88/201 (43%), Gaps = 42/201 (20%)
Query: 535 ATVYKGILDLDQTFIAVKVLF----LHQRGALKSFMAECQALRNIRHRNLVKIITACSTS 590
VYKG ++ T +AVK L + + F E + +H NLV+++ S
Sbjct: 36 GVVYKGYVN--NTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGFSSDG 93
Query: 591 DFQGNYFRALVYEFMHHGSL-------ESCPRILSFLRRLNIAIDVASALEYLH--HHCK 641
D LVY + +GSL + P LS+ R IA A+ + +LH HH
Sbjct: 94 DD-----LCLVYVYXPNGSLLDRLSCLDGTPP-LSWHXRCKIAQGAANGINFLHENHH-- 145
Query: 642 KPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---- 697
+H D+K +N+LLD TA + DFGL R + S + GT Y PE
Sbjct: 146 ---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRI--VGTTAYXAPEALRG 200
Query: 698 ----------YGILLLEIFTG 708
+G++LLEI TG
Sbjct: 201 EITPKSDIYSFGVVLLEIITG 221
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 99/227 (43%), Gaps = 50/227 (22%)
Query: 537 VYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNY 596
VY+G+ +AVK L ++ F+ E ++ I+H NLV+++ C+ + +
Sbjct: 233 VYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR---EPPF 288
Query: 597 FRALVYEFMHHGSLESCPRILSFLRRLN-----------IAIDVASALEYLHHHCKKPIV 645
+ ++ EFM +G+L L +LR N +A ++SA+EYL KK +
Sbjct: 289 Y--IITEFMTYGNL------LDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFI 337
Query: 646 HCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE-------- 697
H +L N L+ + + DFGL+R + + G K + + PE
Sbjct: 338 HRNLAARNCLVGENHLVKVADFGLSRLM---TGDTYTAHAGAKFPIKWTAPESLAYNKFS 394
Query: 698 -------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQ 736
+G+LL EI T G P G+DL ++ D ++
Sbjct: 395 IKSDVWAFGVLLWEIATYGMSPYP-----GIDLSQVYELLEKDYRME 436
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 88/197 (44%), Gaps = 44/197 (22%)
Query: 537 VYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNY 596
VY+G+ +AVK L ++ F+ E ++ I+H NLV+++ C+ + +
Sbjct: 275 VYEGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR---EPPF 330
Query: 597 FRALVYEFMHHGSLESCPRILSFLRRLN-----------IAIDVASALEYLHHHCKKPIV 645
+ ++ EFM +G+L L +LR N +A ++SA+EYL KK +
Sbjct: 331 Y--IITEFMTYGNL------LDYLRECNRQEVNAVVLLYMATQISSAMEYLE---KKNFI 379
Query: 646 HCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE-------- 697
H +L N L+ + + DFGL+R + + G K + + PE
Sbjct: 380 HRNLAARNCLVGENHLVKVADFGLSRLM---TGDTYTAHAGAKFPIKWTAPESLAYNKFS 436
Query: 698 -------YGILLLEIFT 707
+G+LL EI T
Sbjct: 437 IKSDVWAFGVLLWEIAT 453
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 90/207 (43%), Gaps = 42/207 (20%)
Query: 535 ATVYKGILDLDQTFIAVKVLFLHQRG--ALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
TVYKG D +AVK+L + L++F E LR RH N++ + +
Sbjct: 38 GTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQL 94
Query: 593 QGNYFRALVYEF------MHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVH 646
A+V ++ HH L + + ++IA A ++YLH K I+H
Sbjct: 95 ------AIVTQWCEGSSLYHH--LHASETKFEMKKLIDIARQTARGMDYLH---AKSIIH 143
Query: 647 CDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE--------- 697
DLK +N+ L D T +GDFGL S+Q L G++ + PE
Sbjct: 144 RDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQ--LSGSILWMAPEVIRMQDSNP 201
Query: 698 ---------YGILLLEIFTGKRPTSDM 715
+GI+L E+ TG+ P S++
Sbjct: 202 YSFQSDVYAFGIVLYELMTGQLPYSNI 228
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 90/207 (43%), Gaps = 42/207 (20%)
Query: 535 ATVYKGILDLDQTFIAVKVLFLHQRG--ALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
TVYKG D +AVK+L + L++F E LR RH N++ + +
Sbjct: 38 GTVYKGKWHGD---VAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTKPQL 94
Query: 593 QGNYFRALVYEF------MHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVH 646
A+V ++ HH L + + ++IA A ++YLH K I+H
Sbjct: 95 ------AIVTQWCEGSSLYHH--LHASETKFEMKKLIDIARQTARGMDYLH---AKSIIH 143
Query: 647 CDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE--------- 697
DLK +N+ L D T +GDFGL S+Q L G++ + PE
Sbjct: 144 RDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQ--LSGSILWMAPEVIRMQDSNP 201
Query: 698 ---------YGILLLEIFTGKRPTSDM 715
+GI+L E+ TG+ P S++
Sbjct: 202 YSFQSDVYAFGIVLYELMTGQLPYSNI 228
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 87/197 (44%), Gaps = 44/197 (22%)
Query: 537 VYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNY 596
VY G+ +AVK L ++ F+ E ++ I+H NLV+++ C+ + +
Sbjct: 48 VYVGVWKKYSLTVAVKTL-KEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT---LEPPF 103
Query: 597 FRALVYEFMHHGSLESCPRILSFLRRLN-----------IAIDVASALEYLHHHCKKPIV 645
+ +V E+M +G+L L +LR N +A ++SA+EYL KK +
Sbjct: 104 Y--IVTEYMPYGNL------LDYLRECNREEVTAVVLLYMATQISSAMEYLE---KKNFI 152
Query: 646 HCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE-------- 697
H DL N L+ + + DFGL+R + + G K + + PE
Sbjct: 153 HRDLAARNCLVGENHVVKVADFGLSRLM---TGDTYTAHAGAKFPIKWTAPESLAYNTFS 209
Query: 698 -------YGILLLEIFT 707
+G+LL EI T
Sbjct: 210 IKSDVWAFGVLLWEIAT 226
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 96/233 (41%), Gaps = 38/233 (16%)
Query: 505 RLRRQRTVTSSESSSRKDLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRG--AL 562
R R QR + +++L+ S TVYKG D +AVK+L +
Sbjct: 20 RPRGQRDSSYYWEIEASEVMLSTRIGSGSFGTVYKGKWHGD---VAVKILKVVDPTPEQF 76
Query: 563 KSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESCPRI----LS 618
++F E LR RH N++ + + + A+V ++ SL +
Sbjct: 77 QAFRNEVAVLRKTRHVNILLFMGYMTKDNL------AIVTQWCEGSSLYKHLHVQETKFQ 130
Query: 619 FLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMS 678
+ ++IA A ++YLH K I+H D+K +N+ L +T +GDFGL
Sbjct: 131 MFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSG 187
Query: 679 SNQCSSVGLKGTVGYATPE------------------YGILLLEIFTGKRPTS 713
S Q G+V + PE YGI+L E+ TG+ P S
Sbjct: 188 SQQVEQP--TGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYS 238
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 86/174 (49%), Gaps = 29/174 (16%)
Query: 563 KSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESCPRI----LS 618
+ F++E + H N++++ + S ++ EFM +G+L+S R+ +
Sbjct: 62 REFLSEASIMGQFEHPNIIRLEGVVTNS-----MPVMILTEFMENGALDSFLRLNDGQFT 116
Query: 619 FLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMS 678
++ + + +AS + YL + VH DL N+L+++++ + DFGL+RF+ E S
Sbjct: 117 VIQLVGMLRGIASGMRYL---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSS 173
Query: 679 S-NQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDM 715
+ SS+G K + + PE YGI++ E+ + G+RP DM
Sbjct: 174 DPTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDM 227
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 101/224 (45%), Gaps = 36/224 (16%)
Query: 511 TVTSSESSSRKDLLLNVSYESLVKATVYKG------ILDLDQTFIAVKVLFLHQRGALKS 564
TV + + R LN+ L++ T+ KG + D +AVK + ++
Sbjct: 176 TVAAQDEFYRSGWALNMKELKLLQ-TIGKGEFGDVMLGDYRGNKVAVKCI--KNDATAQA 232
Query: 565 FMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESCPR-----ILSF 619
F+AE + +RH NLV+++ +G + +V E+M GSL R +L
Sbjct: 233 FLAEASVMTQLRHSNLVQLLGVIVEE--KGGLY--IVTEYMAKGSLVDYLRSRGRSVLGG 288
Query: 620 LRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSS 679
L ++DV A+EYL + VH DL NVL+ D A + DFGLT+ E S+
Sbjct: 289 DCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTK---EASST 342
Query: 680 NQCSSVGLKGTVGYATPE-----------YGILLLEIFT-GKRP 711
+ +K T A E +GILL EI++ G+ P
Sbjct: 343 QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 386
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 111/258 (43%), Gaps = 41/258 (15%)
Query: 520 RKDLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGAL--KSFMAECQALRNIRH 577
R+ L L V V+ G + T +A+K L + G + ++F+ E Q ++ +RH
Sbjct: 266 RESLRLEVKLGQGCFGEVWMGTWN-GTTRVAIKTL---KPGTMSPEAFLQEAQVMKKLRH 321
Query: 578 RNLVKIITACSTSDFQGNYFRALVYEFMHHGSL-----ESCPRILSFLRRLNIAIDVASA 632
LV++ S +V E+M GSL + L + +++A +AS
Sbjct: 322 EKLVQLYAVVSEEPIY------IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASG 375
Query: 633 LEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVG 692
+ Y+ + VH DL+ +N+L+ ++ + DFGL R I + + + G K +
Sbjct: 376 MAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIED---NEYTARQGAKFPIK 429
Query: 693 YATPE---------------YGILLLEIFT-GKRPTSDMFT-EGLD-LHNFVKMALPDQI 734
+ PE +GILL E+ T G+ P M E LD + +M P +
Sbjct: 430 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPEC 489
Query: 735 LQVLDPLFLVGGVQEGEE 752
+ L L +E EE
Sbjct: 490 PESLHDLMCQCWRKEPEE 507
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 111/258 (43%), Gaps = 41/258 (15%)
Query: 520 RKDLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGAL--KSFMAECQALRNIRH 577
R+ L L V V+ G + T +A+K L + G + ++F+ E Q ++ +RH
Sbjct: 7 RESLRLEVKLGQGCFGEVWMGTWN-GTTRVAIKTL---KPGTMSPEAFLQEAQVMKKLRH 62
Query: 578 RNLVKIITACSTSDFQGNYFRALVYEFMHHGSL-----ESCPRILSFLRRLNIAIDVASA 632
LV++ S +V E+M GSL + L + +++A +AS
Sbjct: 63 EKLVQLYAVVSEEPI------XIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASG 116
Query: 633 LEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVG 692
+ Y+ + VH DL+ +N+L+ ++ + DFGL R I + + + G K +
Sbjct: 117 MAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIED---NEXTARQGAKFPIK 170
Query: 693 YATPE---------------YGILLLEIFT-GKRPTSDMFT-EGLD-LHNFVKMALPDQI 734
+ PE +GILL E+ T G+ P M E LD + +M P +
Sbjct: 171 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPEC 230
Query: 735 LQVLDPLFLVGGVQEGEE 752
+ L L +E EE
Sbjct: 231 PESLHDLMCQCWRKEPEE 248
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 82/178 (46%), Gaps = 27/178 (15%)
Query: 551 VKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSL 610
V V + ++F+AE + +RH NLV+++ +G + +V E+M GSL
Sbjct: 47 VAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEE--KGGLY--IVTEYMAKGSL 102
Query: 611 ESCPR-----ILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMG 665
R +L L ++DV A+EYL + VH DL NVL+ D A +
Sbjct: 103 VDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVS 159
Query: 666 DFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE-----------YGILLLEIFT-GKRP 711
DFGLT+ E S+ + +K T A E +GILL EI++ G+ P
Sbjct: 160 DFGLTK---EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 214
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 104/229 (45%), Gaps = 61/229 (26%)
Query: 532 LVKATVYKGILDLDQTFIAVKVLFLHQRGAL--KSFMAECQALRNIRHRNLVKIITACST 589
+VK ++G D +A+K++ + G++ F+ E + + N+ H LV++ C+
Sbjct: 24 VVKYGKWRGQYD-----VAIKMI---KEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 590 SDFQGNYFRALVYEFMHHGSLESCPRILSFLRR----------LNIAIDVASALEYLHHH 639
Q F ++ E+M +G L L++LR L + DV A+EYL
Sbjct: 76 ---QRPIF--IITEYMANGCL------LNYLREMRHRFQTQQLLEMCKDVCEAMEYLE-- 122
Query: 640 CKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE-- 697
K +H DL N L+++ + DFGL+R+ V+ SS G K V ++ PE
Sbjct: 123 -SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRY---VLDDEYTSSRGSKFPVRWSPPEVL 178
Query: 698 -------------YGILLLEIFT-GKRP--------TSDMFTEGLDLHN 724
+G+L+ EI++ GK P T++ +GL L+
Sbjct: 179 MYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR 227
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 82/178 (46%), Gaps = 27/178 (15%)
Query: 551 VKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSL 610
V V + ++F+AE + +RH NLV+++ +G + +V E+M GSL
Sbjct: 32 VAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEE--KGGLY--IVTEYMAKGSL 87
Query: 611 ESCPR-----ILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMG 665
R +L L ++DV A+EYL + VH DL NVL+ D A +
Sbjct: 88 VDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVS 144
Query: 666 DFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE-----------YGILLLEIFT-GKRP 711
DFGLT+ E S+ + +K T A E +GILL EI++ G+ P
Sbjct: 145 DFGLTK---EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 199
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 82/178 (46%), Gaps = 27/178 (15%)
Query: 551 VKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSL 610
V V + ++F+AE + +RH NLV+++ +G + +V E+M GSL
Sbjct: 38 VAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEE--KGGLY--IVTEYMAKGSL 93
Query: 611 ESCPR-----ILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMG 665
R +L L ++DV A+EYL + VH DL NVL+ D A +
Sbjct: 94 VDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVS 150
Query: 666 DFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE-----------YGILLLEIFT-GKRP 711
DFGLT+ E S+ + +K T A E +GILL EI++ G+ P
Sbjct: 151 DFGLTK---EASSTQDTGKLPVKWTAPEALREAAFSTKSDVWSFGILLWEIYSFGRVP 205
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 111/258 (43%), Gaps = 41/258 (15%)
Query: 520 RKDLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGAL--KSFMAECQALRNIRH 577
R+ L L V V+ G + T +A+K L + G + ++F+ E Q ++ +RH
Sbjct: 183 RESLRLEVKLGQGCFGEVWMGTWN-GTTRVAIKTL---KPGTMSPEAFLQEAQVMKKLRH 238
Query: 578 RNLVKIITACSTSDFQGNYFRALVYEFMHHGSL-----ESCPRILSFLRRLNIAIDVASA 632
LV++ S +V E+M GSL + L + +++A +AS
Sbjct: 239 EKLVQLYAVVSEEPI------YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASG 292
Query: 633 LEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVG 692
+ Y+ + VH DL+ +N+L+ ++ + DFGL R I + + + G K +
Sbjct: 293 MAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIED---NEYTARQGAKFPIK 346
Query: 693 YATPE---------------YGILLLEIFT-GKRPTSDMFT-EGLD-LHNFVKMALPDQI 734
+ PE +GILL E+ T G+ P M E LD + +M P +
Sbjct: 347 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPEC 406
Query: 735 LQVLDPLFLVGGVQEGEE 752
+ L L +E EE
Sbjct: 407 PESLHDLMCQCWRKEPEE 424
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 111/258 (43%), Gaps = 41/258 (15%)
Query: 520 RKDLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGAL--KSFMAECQALRNIRH 577
R+ L L V V+ G + T +A+K L + G + ++F+ E Q ++ +RH
Sbjct: 183 RESLRLEVKLGQGCFGEVWMGTWN-GTTRVAIKTL---KPGTMSPEAFLQEAQVMKKLRH 238
Query: 578 RNLVKIITACSTSDFQGNYFRALVYEFMHHGSL-----ESCPRILSFLRRLNIAIDVASA 632
LV++ S +V E+M GSL + L + +++A +AS
Sbjct: 239 EKLVQLYAVVSEEPI------YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASG 292
Query: 633 LEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVG 692
+ Y+ + VH DL+ +N+L+ ++ + DFGL R I + + + G K +
Sbjct: 293 MAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIED---NEYTARQGAKFPIK 346
Query: 693 YATPE---------------YGILLLEIFT-GKRPTSDMFT-EGLD-LHNFVKMALPDQI 734
+ PE +GILL E+ T G+ P M E LD + +M P +
Sbjct: 347 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPEC 406
Query: 735 LQVLDPLFLVGGVQEGEE 752
+ L L +E EE
Sbjct: 407 PESLHDLMCQCWRKEPEE 424
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 111/258 (43%), Gaps = 41/258 (15%)
Query: 520 RKDLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGAL--KSFMAECQALRNIRH 577
R+ L L V V+ G + T +A+K L + G + ++F+ E Q ++ +RH
Sbjct: 10 RESLRLEVKLGQGCFGEVWMGTWN-GTTRVAIKTL---KPGTMSPEAFLQEAQVMKKLRH 65
Query: 578 RNLVKIITACSTSDFQGNYFRALVYEFMHHGSL-----ESCPRILSFLRRLNIAIDVASA 632
LV++ S +V E+M GSL + L + +++A +AS
Sbjct: 66 EKLVQLYAVVSEEPIY------IVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASG 119
Query: 633 LEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVG 692
+ Y+ + VH DL+ +N+L+ ++ + DFGL R I + + + G K +
Sbjct: 120 MAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIED---NEYTARQGAKFPIK 173
Query: 693 YATPE---------------YGILLLEIFT-GKRPTSDMFT-EGLD-LHNFVKMALPDQI 734
+ PE +GILL E+ T G+ P M E LD + +M P +
Sbjct: 174 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPEC 233
Query: 735 LQVLDPLFLVGGVQEGEE 752
+ L L +E EE
Sbjct: 234 PESLHDLMCQCWRKEPEE 251
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 112/258 (43%), Gaps = 41/258 (15%)
Query: 520 RKDLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGAL--KSFMAECQALRNIRH 577
R+ L L V V+ G + T +A+K L + G + ++F+ E Q ++ +RH
Sbjct: 14 RESLRLEVKLGQGCFGEVWMGTWN-GTTRVAIKTL---KPGTMSPEAFLQEAQVMKKLRH 69
Query: 578 RNLVKIITACSTSDFQGNYFRALVYEFMHHGSL-----ESCPRILSFLRRLNIAIDVASA 632
LV++ S +V E+M+ GSL + L + ++++ +AS
Sbjct: 70 EKLVQLYAVVSEEPI------YIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASG 123
Query: 633 LEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVG 692
+ Y+ + VH DL+ +N+L+ ++ + DFGL R I + + + G K +
Sbjct: 124 MAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIED---NEWTARQGAKFPIK 177
Query: 693 YATPE---------------YGILLLEIFT-GKRPTSDMFT-EGLD-LHNFVKMALPDQI 734
+ PE +GILL E+ T G+ P M E LD + +M P +
Sbjct: 178 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPEC 237
Query: 735 LQVLDPLFLVGGVQEGEE 752
+ L L +E EE
Sbjct: 238 PESLHDLMCQCWRKEPEE 255
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 86/203 (42%), Gaps = 47/203 (23%)
Query: 545 DQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEF 604
D+ +AVK L A K F E + L N++H ++VK C D +V+E+
Sbjct: 44 DKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPL-----IMVFEY 98
Query: 605 MHHGSL---------------ESCPRI----LSFLRRLNIAIDVASALEYLHHHCKKPIV 645
M HG L + PR L + L+IA +AS + YL + V
Sbjct: 99 MKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYL---ASQHFV 155
Query: 646 HCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVG----------------LKG 689
H DL N L+ ++ +GDFG++R +V S++ G K
Sbjct: 156 HRDLATRNCLVGANLLVKIGDFGMSR---DVYSTDYYRVGGHTMLPIRWMPPESIMYRKF 212
Query: 690 TVGYATPEYGILLLEIFT-GKRP 711
T +G++L EIFT GK+P
Sbjct: 213 TTESDVWSFGVILWEIFTYGKQP 235
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 111/258 (43%), Gaps = 41/258 (15%)
Query: 520 RKDLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGAL--KSFMAECQALRNIRH 577
R+ L L V V+ G + T +A+K L + G + ++F+ E Q ++ +RH
Sbjct: 183 RESLRLEVKLGQGCFGEVWMGTWN-GTTRVAIKTL---KPGTMSPEAFLQEAQVMKKLRH 238
Query: 578 RNLVKIITACSTSDFQGNYFRALVYEFMHHGSL-----ESCPRILSFLRRLNIAIDVASA 632
LV++ S +V E+M GSL + L + +++A +AS
Sbjct: 239 EKLVQLYAVVSEEPI------YIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASG 292
Query: 633 LEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVG 692
+ Y+ + VH DL+ +N+L+ ++ + DFGL R I + + + G K +
Sbjct: 293 MAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIED---NEYTARQGAKFPIK 346
Query: 693 YATPE---------------YGILLLEIFT-GKRPTSDMFT-EGLD-LHNFVKMALPDQI 734
+ PE +GILL E+ T G+ P M E LD + +M P +
Sbjct: 347 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPEC 406
Query: 735 LQVLDPLFLVGGVQEGEE 752
+ L L +E EE
Sbjct: 407 PESLHDLMCQCWRKEPEE 424
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 85/174 (48%), Gaps = 29/174 (16%)
Query: 563 KSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESCPRI----LS 618
+ F++E + H N++++ + S ++ EFM +G+L+S R+ +
Sbjct: 60 REFLSEASIMGQFEHPNIIRLEGVVTNS-----MPVMILTEFMENGALDSFLRLNDGQFT 114
Query: 619 FLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMS 678
++ + + +AS + YL + VH DL N+L+++++ + DFGL+RF+ E S
Sbjct: 115 VIQLVGMLRGIASGMRYL---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSS 171
Query: 679 S-NQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDM 715
SS+G K + + PE YGI++ E+ + G+RP DM
Sbjct: 172 DPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERPYWDM 225
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 88/192 (45%), Gaps = 38/192 (19%)
Query: 547 TFIAVKVLFLHQRGAL--KSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEF 604
T +A+K L + G + +SF+ E Q ++ ++H LV++ S +V E+
Sbjct: 34 TKVAIKTL---KPGTMSPESFLEEAQIMKKLKHDKLVQLYAVVSEEPI------YIVTEY 84
Query: 605 MHHGSL-----ESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDND 659
M+ GSL + R L +++A VA+ + Y+ + +H DL+ +N+L+ N
Sbjct: 85 MNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE---RMNYIHRDLRSANILVGNG 141
Query: 660 MTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLE 704
+ + DFGL R I + + + G K + + PE +GILL E
Sbjct: 142 LICKIADFGLARLIED---NEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTE 198
Query: 705 IFT-GKRPTSDM 715
+ T G+ P M
Sbjct: 199 LVTKGRVPYPGM 210
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 112/258 (43%), Gaps = 41/258 (15%)
Query: 520 RKDLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGAL--KSFMAECQALRNIRH 577
R+ L L V V+ G + T +A+K L + G + ++F+ E Q ++ +RH
Sbjct: 14 RESLRLEVKLGQGCFGEVWMGTWN-GTTRVAIKTL---KPGTMSPEAFLQEAQVMKKLRH 69
Query: 578 RNLVKIITACSTSDFQGNYFRALVYEFMHHGSL-----ESCPRILSFLRRLNIAIDVASA 632
LV++ S +V E+M+ GSL + L + ++++ +AS
Sbjct: 70 EKLVQLYAVVSEEPI------YIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASG 123
Query: 633 LEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVG 692
+ Y+ + VH DL+ +N+L+ ++ + DFGL R I + + + G K +
Sbjct: 124 MAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIED---NEYTARQGAKFPIK 177
Query: 693 YATPE---------------YGILLLEIFT-GKRPTSDMFT-EGLD-LHNFVKMALPDQI 734
+ PE +GILL E+ T G+ P M E LD + +M P +
Sbjct: 178 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPEC 237
Query: 735 LQVLDPLFLVGGVQEGEE 752
+ L L +E EE
Sbjct: 238 PESLHDLMCQCWRKEPEE 255
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 111/258 (43%), Gaps = 41/258 (15%)
Query: 520 RKDLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGAL--KSFMAECQALRNIRH 577
R+ L L V V+ G + T +A+K L + G + ++F+ E Q ++ IRH
Sbjct: 17 RESLRLEVKLGQGCFGEVWMGTWN-GTTRVAIKTL---KPGTMSPEAFLQEAQVMKKIRH 72
Query: 578 RNLVKIITACSTSDFQGNYFRALVYEFMHHGSL-----ESCPRILSFLRRLNIAIDVASA 632
LV++ S +V E+M GSL + L + +++A +AS
Sbjct: 73 EKLVQLYAVVSEEPI------YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASG 126
Query: 633 LEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVG 692
+ Y+ + VH DL+ +N+L+ ++ + DFGL R I + + + G K +
Sbjct: 127 MAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIED---NEYTARQGAKFPIK 180
Query: 693 YATPE---------------YGILLLEIFT-GKRPTSDMFT-EGLD-LHNFVKMALPDQI 734
+ PE +GILL E+ T G+ P M E LD + +M P +
Sbjct: 181 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPEC 240
Query: 735 LQVLDPLFLVGGVQEGEE 752
+ L L ++ EE
Sbjct: 241 PESLHDLMCQCWRKDPEE 258
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 84/173 (48%), Gaps = 14/173 (8%)
Query: 556 LHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESCPR 615
+ RG ++ E L+ + H N+VK++ + Y +V+E ++ G + P
Sbjct: 74 IQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLY---MVFELVNQGPVMEVPT 130
Query: 616 I--LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673
+ LS + D+ +EYLH+ + I+H D+KPSN+L+ D + DFG++
Sbjct: 131 LKPLSEDQARFYFQDLIKGIEYLHY---QKIIHRDIKPSNLLVGEDGHIKIADFGVSN-- 185
Query: 674 PEVMSSNQCSSVGLKGTVGYATPEYGILLLEIFTGKRPTSDMFTEGLDLHNFV 726
E S+ S + GT + PE +IF+GK D++ G+ L+ FV
Sbjct: 186 -EFKGSDALLSNTV-GTPAFMAPESLSETRKIFSGK--ALDVWAMGVTLYCFV 234
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 96/219 (43%), Gaps = 39/219 (17%)
Query: 520 RKDLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGAL--KSFMAECQALRNIRH 577
R+ L L V V+ G + T +A+K L + G + ++F+ E Q ++ +RH
Sbjct: 17 RESLRLEVKLGQGCFGEVWMGTWN-GTTRVAIKTL---KPGTMSPEAFLQEAQVMKKLRH 72
Query: 578 RNLVKIITACSTSDFQGNYFRALVYEFMHHGSL-----ESCPRILSFLRRLNIAIDVASA 632
LV++ S +V E+M GSL + L + +++A +AS
Sbjct: 73 EKLVQLYAVVSEEPI------YIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASG 126
Query: 633 LEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVG 692
+ Y+ + VH DL+ +N+L+ ++ + DFGL R I + + + G K +
Sbjct: 127 MAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIED---NEXTARQGAKFPIK 180
Query: 693 YATPE---------------YGILLLEIFT-GKRPTSDM 715
+ PE +GILL E+ T G+ P M
Sbjct: 181 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 219
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 99/211 (46%), Gaps = 40/211 (18%)
Query: 547 TFIAVKVLFLHQRGAL--KSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEF 604
T +AVK L ++G++ +F+AE ++ ++H+ LV++ + ++ E+
Sbjct: 38 TKVAVKSL---KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIY------IITEY 88
Query: 605 MHHGSLESCPRI-----LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDND 659
M +GSL + L+ + L++A +A + ++ ++ +H DL+ +N+L+ +
Sbjct: 89 MENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDT 145
Query: 660 MTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLE 704
++ + DFGL R I + + + G K + + PE +GILL E
Sbjct: 146 LSCKIADFGLARLIED---AEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTE 202
Query: 705 IFT-GKRPTSDMFTEGL--DLHNFVKMALPD 732
I T G+ P M + +L +M PD
Sbjct: 203 IVTHGRIPYPGMTNPEVIQNLERGYRMVRPD 233
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 111/258 (43%), Gaps = 41/258 (15%)
Query: 520 RKDLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGAL--KSFMAECQALRNIRH 577
R+ L L V V+ G + T +A+K L + G + ++F+ E Q ++ +RH
Sbjct: 6 RESLRLEVKLGQGCFGEVWMGTWN-GTTRVAIKTL---KPGTMSPEAFLQEAQVMKKLRH 61
Query: 578 RNLVKIITACSTSDFQGNYFRALVYEFMHHGSL-----ESCPRILSFLRRLNIAIDVASA 632
LV++ S +V E+M GSL + L + +++A +AS
Sbjct: 62 EKLVQLYAVVSEEPIY------IVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASG 115
Query: 633 LEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVG 692
+ Y+ + VH DL+ +N+L+ ++ + DFGL R I + + + G K +
Sbjct: 116 MAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIED---NEYTARQGAKFPIK 169
Query: 693 YATPE---------------YGILLLEIFT-GKRPTSDMFT-EGLD-LHNFVKMALPDQI 734
+ PE +GILL E+ T G+ P M E LD + +M P +
Sbjct: 170 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPEC 229
Query: 735 LQVLDPLFLVGGVQEGEE 752
+ L L ++ EE
Sbjct: 230 PESLHDLMCQCWRKDPEE 247
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 69/137 (50%), Gaps = 16/137 (11%)
Query: 549 IAVKVLFLH---QRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFM 605
+AVK + L QR ++ F++E +++ H N+++++ C QG ++ FM
Sbjct: 65 VAVKTMKLDNSSQR-EIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFM 123
Query: 606 HHGSL---------ESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLL 656
+G L E+ P+ + L +D+A +EYL + + +H DL N +L
Sbjct: 124 KYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSN---RNFLHRDLAARNCML 180
Query: 657 DNDMTAHMGDFGLTRFI 673
+DMT + DFGL++ I
Sbjct: 181 RDDMTVCVADFGLSKKI 197
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 111/258 (43%), Gaps = 41/258 (15%)
Query: 520 RKDLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGAL--KSFMAECQALRNIRH 577
R+ L L V V+ G + T +A+K L + G + ++F+ E Q ++ +RH
Sbjct: 17 RESLRLEVKLGQGCFGEVWMGTWN-GTTRVAIKTL---KPGTMSPEAFLQEAQVMKKLRH 72
Query: 578 RNLVKIITACSTSDFQGNYFRALVYEFMHHGSL-----ESCPRILSFLRRLNIAIDVASA 632
LV++ S +V E+M GSL + L + +++A +AS
Sbjct: 73 EKLVQLYAVVSEEPI------YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASG 126
Query: 633 LEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVG 692
+ Y+ + VH DL+ +N+L+ ++ + DFGL R I + + + G K +
Sbjct: 127 MAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIED---NEYTARQGAKFPIK 180
Query: 693 YATPE---------------YGILLLEIFT-GKRPTSDMFT-EGLD-LHNFVKMALPDQI 734
+ PE +GILL E+ T G+ P M E LD + +M P +
Sbjct: 181 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPEC 240
Query: 735 LQVLDPLFLVGGVQEGEE 752
+ L L ++ EE
Sbjct: 241 PESLHDLMCQCWRKDPEE 258
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 87/210 (41%), Gaps = 44/210 (20%)
Query: 535 ATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQG 594
A Y + D+ +AVK L A K F E + L N++H ++VK C D
Sbjct: 32 AECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGD--- 88
Query: 595 NYFRALVYEFMHHGSLESC----------------PRILSFLRRLNIAIDVASALEYLHH 638
+V+E+M HG L P L+ + L+IA +A+ + YL
Sbjct: 89 --PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYL-- 144
Query: 639 HCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVG------------ 686
+ VH DL N L+ ++ +GDFG++R +V S++ G
Sbjct: 145 -ASQHFVHRDLATRNCLVGENLLVKIGDFGMSR---DVYSTDYYRVGGHTMLPIRWMPPE 200
Query: 687 ----LKGTVGYATPEYGILLLEIFT-GKRP 711
K T G++L EIFT GK+P
Sbjct: 201 SIMYRKFTTESDVWSLGVVLWEIFTYGKQP 230
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 111/258 (43%), Gaps = 41/258 (15%)
Query: 520 RKDLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGAL--KSFMAECQALRNIRH 577
R+ L L V V+ G + T +A+K L + G + ++F+ E Q ++ +RH
Sbjct: 8 RESLRLEVKLGQGCFGEVWMGTWN-GTTRVAIKTL---KPGTMSPEAFLQEAQVMKKLRH 63
Query: 578 RNLVKIITACSTSDFQGNYFRALVYEFMHHGSL-----ESCPRILSFLRRLNIAIDVASA 632
LV++ S +V E+M GSL + L + +++A +AS
Sbjct: 64 EKLVQLYAVVSEEPI------YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASG 117
Query: 633 LEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVG 692
+ Y+ + VH DL+ +N+L+ ++ + DFGL R I + + + G K +
Sbjct: 118 MAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIED---NEYTARQGAKFPIK 171
Query: 693 YATPE---------------YGILLLEIFT-GKRPTSDMFT-EGLD-LHNFVKMALPDQI 734
+ PE +GILL E+ T G+ P M E LD + +M P +
Sbjct: 172 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPEC 231
Query: 735 LQVLDPLFLVGGVQEGEE 752
+ L L ++ EE
Sbjct: 232 PESLHDLMCQCWRKDPEE 249
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 99/211 (46%), Gaps = 40/211 (18%)
Query: 547 TFIAVKVLFLHQRGAL--KSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEF 604
T +AVK L ++G++ +F+AE ++ ++H+ LV++ + ++ E+
Sbjct: 46 TKVAVKSL---KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI------YIITEY 96
Query: 605 MHHGSLESCPRI-----LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDND 659
M +GSL + L+ + L++A +A + ++ ++ +H DL+ +N+L+ +
Sbjct: 97 MENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDT 153
Query: 660 MTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLE 704
++ + DFGL R I + + + G K + + PE +GILL E
Sbjct: 154 LSCKIADFGLARLIED---NEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTE 210
Query: 705 IFT-GKRPTSDMFTEGL--DLHNFVKMALPD 732
I T G+ P M + +L +M PD
Sbjct: 211 IVTHGRIPYPGMTNPEVIQNLERGYRMVRPD 241
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 111/258 (43%), Gaps = 41/258 (15%)
Query: 520 RKDLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGAL--KSFMAECQALRNIRH 577
R+ L L V V+ G + T +A+K L + G + ++F+ E Q ++ +RH
Sbjct: 17 RESLRLEVKLGQGCFGEVWMGTWN-GTTRVAIKTL---KPGTMSPEAFLQEAQVMKKLRH 72
Query: 578 RNLVKIITACSTSDFQGNYFRALVYEFMHHGSL-----ESCPRILSFLRRLNIAIDVASA 632
LV++ S +V E+M GSL + L + +++A +AS
Sbjct: 73 EKLVQLYAVVSEEPI------YIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASG 126
Query: 633 LEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVG 692
+ Y+ + VH DL+ +N+L+ ++ + DFGL R I + + + G K +
Sbjct: 127 MAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIED---NEYTARQGAKFPIK 180
Query: 693 YATPE---------------YGILLLEIFT-GKRPTSDMFT-EGLD-LHNFVKMALPDQI 734
+ PE +GILL E+ T G+ P M E LD + +M P +
Sbjct: 181 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPEC 240
Query: 735 LQVLDPLFLVGGVQEGEE 752
+ L L ++ EE
Sbjct: 241 PESLHDLMCQCWRKDPEE 258
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 99/211 (46%), Gaps = 40/211 (18%)
Query: 547 TFIAVKVLFLHQRGAL--KSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEF 604
T +AVK L ++G++ +F+AE ++ ++H+ LV++ + ++ E+
Sbjct: 38 TKVAVKSL---KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI------YIITEY 88
Query: 605 MHHGSLESCPRI-----LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDND 659
M +GSL + L+ + L++A +A + ++ ++ +H DL+ +N+L+ +
Sbjct: 89 MENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDT 145
Query: 660 MTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLE 704
++ + DFGL R I + + + G K + + PE +GILL E
Sbjct: 146 LSCKIADFGLARLIED---NEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTE 202
Query: 705 IFT-GKRPTSDMFTEGL--DLHNFVKMALPD 732
I T G+ P M + +L +M PD
Sbjct: 203 IVTHGRIPYPGMTNPEVIQNLERGYRMVRPD 233
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 99/211 (46%), Gaps = 40/211 (18%)
Query: 547 TFIAVKVLFLHQRGAL--KSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEF 604
T +AVK L ++G++ +F+AE ++ ++H+ LV++ + ++ E+
Sbjct: 44 TKVAVKSL---KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI------YIITEY 94
Query: 605 MHHGSLESCPRI-----LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDND 659
M +GSL + L+ + L++A +A + ++ ++ +H DL+ +N+L+ +
Sbjct: 95 MENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDT 151
Query: 660 MTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLE 704
++ + DFGL R I + + + G K + + PE +GILL E
Sbjct: 152 LSCKIADFGLARLIED---NEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTE 208
Query: 705 IFT-GKRPTSDMFTEGL--DLHNFVKMALPD 732
I T G+ P M + +L +M PD
Sbjct: 209 IVTHGRIPYPGMTNPEVIQNLERGYRMVRPD 239
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 99/211 (46%), Gaps = 40/211 (18%)
Query: 547 TFIAVKVLFLHQRGAL--KSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEF 604
T +AVK L ++G++ +F+AE ++ ++H+ LV++ + ++ E+
Sbjct: 47 TKVAVKSL---KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI------YIITEY 97
Query: 605 MHHGSLESCPRI-----LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDND 659
M +GSL + L+ + L++A +A + ++ ++ +H DL+ +N+L+ +
Sbjct: 98 MENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDT 154
Query: 660 MTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLE 704
++ + DFGL R I + + + G K + + PE +GILL E
Sbjct: 155 LSCKIADFGLARLIED---NEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTE 211
Query: 705 IFT-GKRPTSDMFTEGL--DLHNFVKMALPD 732
I T G+ P M + +L +M PD
Sbjct: 212 IVTHGRIPYPGMTNPEVIQNLERGYRMVRPD 242
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 99/211 (46%), Gaps = 40/211 (18%)
Query: 547 TFIAVKVLFLHQRGAL--KSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEF 604
T +AVK L ++G++ +F+AE ++ ++H+ LV++ + ++ E+
Sbjct: 39 TKVAVKSL---KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIY------IITEY 89
Query: 605 MHHGSLESCPRI-----LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDND 659
M +GSL + L+ + L++A +A + ++ ++ +H DL+ +N+L+ +
Sbjct: 90 MENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDT 146
Query: 660 MTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLE 704
++ + DFGL R I + + + G K + + PE +GILL E
Sbjct: 147 LSCKIADFGLARLIED---NEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTE 203
Query: 705 IFT-GKRPTSDMFTEGL--DLHNFVKMALPD 732
I T G+ P M + +L +M PD
Sbjct: 204 IVTHGRIPYPGMTNPEVIQNLERGYRMVRPD 234
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 99/212 (46%), Gaps = 40/212 (18%)
Query: 546 QTFIAVKVLFLHQRGAL--KSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYE 603
T +AVK L ++G++ +F+AE ++ ++H+ LV++ + ++ E
Sbjct: 37 HTKVAVKSL---KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIY------IITE 87
Query: 604 FMHHGSLESCPRI-----LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN 658
+M +GSL + L+ + L++A +A + ++ ++ +H DL+ +N+L+ +
Sbjct: 88 YMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSD 144
Query: 659 DMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLL 703
++ + DFGL R I + + + G K + + PE +GILL
Sbjct: 145 TLSCKIADFGLARLIED---NEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLT 201
Query: 704 EIFT-GKRPTSDMFTEGL--DLHNFVKMALPD 732
EI T G+ P M + +L +M PD
Sbjct: 202 EIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD 233
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 99/211 (46%), Gaps = 40/211 (18%)
Query: 547 TFIAVKVLFLHQRGAL--KSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEF 604
T +AVK L ++G++ +F+AE ++ ++H+ LV++ + ++ E+
Sbjct: 40 TKVAVKSL---KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIY------IITEY 90
Query: 605 MHHGSLESCPRI-----LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDND 659
M +GSL + L+ + L++A +A + ++ ++ +H DL+ +N+L+ +
Sbjct: 91 MENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDT 147
Query: 660 MTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLE 704
++ + DFGL R I + + + G K + + PE +GILL E
Sbjct: 148 LSCKIADFGLARLIED---NEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTE 204
Query: 705 IFT-GKRPTSDMFTEGL--DLHNFVKMALPD 732
I T G+ P M + +L +M PD
Sbjct: 205 IVTHGRIPYPGMTNPEVIQNLERGYRMVRPD 235
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 111/258 (43%), Gaps = 41/258 (15%)
Query: 520 RKDLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGAL--KSFMAECQALRNIRH 577
R+ L L V V+ G + T +A+K L + G + ++F+ E Q ++ +RH
Sbjct: 17 RESLRLEVKLGQGCFGEVWMGTWN-GTTRVAIKTL---KPGTMSPEAFLQEAQVMKKLRH 72
Query: 578 RNLVKIITACSTSDFQGNYFRALVYEFMHHGSL-----ESCPRILSFLRRLNIAIDVASA 632
LV++ S +V E+M GSL + L + +++A +AS
Sbjct: 73 EKLVQLYAVVSEEPI------YIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASG 126
Query: 633 LEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVG 692
+ Y+ + VH DL+ +N+L+ ++ + DFGL R I + + + G K +
Sbjct: 127 MAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIED---NEYTARQGAKFPIK 180
Query: 693 YATPE---------------YGILLLEIFT-GKRPTSDMFT-EGLD-LHNFVKMALPDQI 734
+ PE +GILL E+ T G+ P M E LD + +M P +
Sbjct: 181 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPEC 240
Query: 735 LQVLDPLFLVGGVQEGEE 752
+ L L ++ EE
Sbjct: 241 PESLHDLMCQCWRKDPEE 258
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 99/211 (46%), Gaps = 40/211 (18%)
Query: 547 TFIAVKVLFLHQRGAL--KSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEF 604
T +AVK L ++G++ +F+AE ++ ++H+ LV++ + ++ E+
Sbjct: 48 TKVAVKSL---KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI------YIITEY 98
Query: 605 MHHGSLESCPRI-----LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDND 659
M +GSL + L+ + L++A +A + ++ ++ +H DL+ +N+L+ +
Sbjct: 99 MENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDT 155
Query: 660 MTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLE 704
++ + DFGL R I + + + G K + + PE +GILL E
Sbjct: 156 LSCKIADFGLARLIED---NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTE 212
Query: 705 IFT-GKRPTSDMFTEGL--DLHNFVKMALPD 732
I T G+ P M + +L +M PD
Sbjct: 213 IVTHGRIPYPGMTNPEVIQNLERGYRMVRPD 243
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 99/211 (46%), Gaps = 40/211 (18%)
Query: 547 TFIAVKVLFLHQRGAL--KSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEF 604
T +AVK L ++G++ +F+AE ++ ++H+ LV++ + ++ E+
Sbjct: 43 TKVAVKSL---KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI------YIITEY 93
Query: 605 MHHGSLESCPRI-----LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDND 659
M +GSL + L+ + L++A +A + ++ ++ +H DL+ +N+L+ +
Sbjct: 94 MENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDT 150
Query: 660 MTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLE 704
++ + DFGL R I + + + G K + + PE +GILL E
Sbjct: 151 LSCKIADFGLARLIED---NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTE 207
Query: 705 IFT-GKRPTSDMFTEGL--DLHNFVKMALPD 732
I T G+ P M + +L +M PD
Sbjct: 208 IVTHGRIPYPGMTNPEVIQNLERGYRMVRPD 238
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 99/211 (46%), Gaps = 40/211 (18%)
Query: 547 TFIAVKVLFLHQRGAL--KSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEF 604
T +AVK L ++G++ +F+AE ++ ++H+ LV++ + ++ E+
Sbjct: 44 TKVAVKSL---KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPI------YIITEY 94
Query: 605 MHHGSLESCPRI-----LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDND 659
M +GSL + L+ + L++A +A + ++ ++ +H DL+ +N+L+ +
Sbjct: 95 MENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDT 151
Query: 660 MTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLE 704
++ + DFGL R I + + + G K + + PE +GILL E
Sbjct: 152 LSCKIADFGLARLIED---NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTE 208
Query: 705 IFT-GKRPTSDMFTEGL--DLHNFVKMALPD 732
I T G+ P M + +L +M PD
Sbjct: 209 IVTHGRIPYPGMTNPEVIQNLERGYRMVRPD 239
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 99/212 (46%), Gaps = 40/212 (18%)
Query: 546 QTFIAVKVLFLHQRGAL--KSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYE 603
T +AVK L ++G++ +F+AE ++ ++H+ LV++ + ++ E
Sbjct: 37 HTKVAVKSL---KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIY------IITE 87
Query: 604 FMHHGSLESCPRI-----LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN 658
+M +GSL + L+ + L++A +A + ++ ++ +H DL+ +N+L+ +
Sbjct: 88 YMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSD 144
Query: 659 DMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLL 703
++ + DFGL R I + + + G K + + PE +GILL
Sbjct: 145 TLSCKIADFGLARLIED---NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLT 201
Query: 704 EIFT-GKRPTSDMFTEGL--DLHNFVKMALPD 732
EI T G+ P M + +L +M PD
Sbjct: 202 EIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD 233
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 111/258 (43%), Gaps = 41/258 (15%)
Query: 520 RKDLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGAL--KSFMAECQALRNIRH 577
R+ L L V V+ G + T +A+K L + G + ++F+ E Q ++ +RH
Sbjct: 184 RESLRLEVKLGQGCFGEVWMGTWN-GTTRVAIKTL---KPGNMSPEAFLQEAQVMKKLRH 239
Query: 578 RNLVKIITACSTSDFQGNYFRALVYEFMHHGSL-----ESCPRILSFLRRLNIAIDVASA 632
LV++ S +V E+M GSL + L + +++A +AS
Sbjct: 240 EKLVQLYAVVSEEPI------YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASG 293
Query: 633 LEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVG 692
+ Y+ + VH DL+ +N+L+ ++ + DFGL R I + + + G K +
Sbjct: 294 MAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLGRLIED---NEYTARQGAKFPIK 347
Query: 693 YATPE---------------YGILLLEIFT-GKRPTSDMFT-EGLD-LHNFVKMALPDQI 734
+ PE +GILL E+ T G+ P M E LD + +M P +
Sbjct: 348 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPEC 407
Query: 735 LQVLDPLFLVGGVQEGEE 752
+ L L ++ EE
Sbjct: 408 PESLHDLMCQCWRKDPEE 425
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 99/212 (46%), Gaps = 40/212 (18%)
Query: 546 QTFIAVKVLFLHQRGAL--KSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYE 603
T +AVK L ++G++ +F+AE ++ ++H+ LV++ + ++ E
Sbjct: 32 HTKVAVKSL---KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIY------IITE 82
Query: 604 FMHHGSLESCPRI-----LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN 658
+M +GSL + L+ + L++A +A + ++ ++ +H DL+ +N+L+ +
Sbjct: 83 YMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSD 139
Query: 659 DMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLL 703
++ + DFGL R I + + + G K + + PE +GILL
Sbjct: 140 TLSCKIADFGLARLIED---NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLT 196
Query: 704 EIFT-GKRPTSDMFTEGL--DLHNFVKMALPD 732
EI T G+ P M + +L +M PD
Sbjct: 197 EIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD 228
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 87/197 (44%), Gaps = 40/197 (20%)
Query: 549 IAVKVLFLHQRG--ALKSFMAECQALRNIRHRNLVKIITACSTSDF---------QGNYF 597
+AVK++ Q +L+ E + ++ + H N+VK+ T G F
Sbjct: 43 VAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVF 102
Query: 598 RALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD 657
LV HG ++ F + + SA++Y H +K IVH DLK N+LLD
Sbjct: 103 DYLV----AHGRMKEKEARAKFRQ-------IVSAVQYCH---QKYIVHRDLKAENLLLD 148
Query: 658 NDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPEYGILLLEIFTGKR---PTSD 714
DM + DFG F E N+ + G+ YA P E+F GK+ P D
Sbjct: 149 GDMNIKIADFG---FSNEFTVGNKLDT--FCGSPPYAAP-------ELFQGKKYDGPEVD 196
Query: 715 MFTEGLDLHNFVKMALP 731
+++ G+ L+ V +LP
Sbjct: 197 VWSLGVILYTLVSGSLP 213
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 91/192 (47%), Gaps = 30/192 (15%)
Query: 546 QTFIAVKVLFL-HQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEF 604
+ F+A+K L + + F++E + H N++ + + S ++ EF
Sbjct: 61 EIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPV-----MIITEF 115
Query: 605 MHHGSLESCPRI----LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDM 660
M +GSL+S R + ++ + + +A+ ++YL VH DL N+L+++++
Sbjct: 116 MENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYL---ADMNYVHRDLAARNILVNSNL 172
Query: 661 TAHMGDFGLTRFIPEVMSS-NQCSSVGLKGTVGYATPE---------------YGILLLE 704
+ DFGL+RF+ + S S++G K + + PE YGI++ E
Sbjct: 173 VCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWE 232
Query: 705 IFT-GKRPTSDM 715
+ + G+RP DM
Sbjct: 233 VMSYGERPYWDM 244
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 87/197 (44%), Gaps = 40/197 (20%)
Query: 549 IAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDF---------QGNYF 597
+AVK++ Q +L+ E + ++ + H N+VK+ T G F
Sbjct: 42 VAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVF 101
Query: 598 RALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD 657
LV HG ++ F + + SA++Y H +K IVH DLK N+LLD
Sbjct: 102 DYLV----AHGRMKEKEARAKFRQ-------IVSAVQYCH---QKFIVHRDLKAENLLLD 147
Query: 658 NDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPEYGILLLEIFTGKR---PTSD 714
DM + DFG F E N+ + G+ YA P E+F GK+ P D
Sbjct: 148 ADMNIKIADFG---FSNEFTFGNKLDT--FCGSPPYAAP-------ELFQGKKYDGPEVD 195
Query: 715 MFTEGLDLHNFVKMALP 731
+++ G+ L+ V +LP
Sbjct: 196 VWSLGVILYTLVSGSLP 212
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 87/197 (44%), Gaps = 40/197 (20%)
Query: 549 IAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDF---------QGNYF 597
+AVK++ Q +L+ E + ++ + H N+VK+ T G F
Sbjct: 42 VAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVF 101
Query: 598 RALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD 657
LV HG ++ F + + SA++Y H +K IVH DLK N+LLD
Sbjct: 102 DYLV----AHGRMKEKEARAKFRQ-------IVSAVQYCH---QKFIVHRDLKAENLLLD 147
Query: 658 NDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPEYGILLLEIFTGKR---PTSD 714
DM + DFG F E N+ + G+ YA P E+F GK+ P D
Sbjct: 148 ADMNIKIADFG---FSNEFTFGNKLDT--FCGSPPYAAP-------ELFQGKKYDGPEVD 195
Query: 715 MFTEGLDLHNFVKMALP 731
+++ G+ L+ V +LP
Sbjct: 196 VWSLGVILYTLVSGSLP 212
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 59/117 (50%), Gaps = 20/117 (17%)
Query: 611 ESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLT 670
E+C R + ++ SALEYLH K I+H DLKP N+LL+ DM + DFG
Sbjct: 131 ETCTRFYT--------AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTA 179
Query: 671 RFI-PEVMSSNQCSSVGLKGTVGYATPEYGILLLEIFTGKRPTSDMFTEGLDLHNFV 726
+ + PE S Q + GT Y +PE LL E K +SD++ G ++ V
Sbjct: 180 KVLSPE---SKQARANSFVGTAQYVSPE---LLTEKSASK--SSDLWALGCIIYQLV 228
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 95/219 (43%), Gaps = 39/219 (17%)
Query: 520 RKDLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGAL--KSFMAECQALRNIRH 577
R+ L L V V+ G + T +A+K L + G + ++F+ E Q ++ +RH
Sbjct: 17 RESLRLEVKLGQGCFGEVWMGTWN-GTTRVAIKTL---KPGTMSPEAFLQEAQVMKKLRH 72
Query: 578 RNLVKIITACSTSDFQGNYFRALVYEFMHHGSL-----ESCPRILSFLRRLNIAIDVASA 632
LV++ S +V E+M GSL + L + +++A +AS
Sbjct: 73 EKLVQLYAVVSEEPI------YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASG 126
Query: 633 LEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVG 692
+ Y+ + VH DL +N+L+ ++ + DFGL R I + + + G K +
Sbjct: 127 MAYVE---RMNYVHRDLAAANILVGENLVCKVADFGLARLIED---NEYTARQGAKFPIK 180
Query: 693 YATPE---------------YGILLLEIFT-GKRPTSDM 715
+ PE +GILL E+ T G+ P M
Sbjct: 181 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGM 219
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 88/196 (44%), Gaps = 29/196 (14%)
Query: 535 ATVYKGILDLDQTFIAVKVLFLH-QRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQ 593
ATVYKG+ ++A+K + L + G + + E ++ ++H N+V++ T +
Sbjct: 19 ATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENK- 77
Query: 594 GNYFRALVYEFMHHG--------SLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIV 645
LV+EFM + ++ + PR L + L + H + I+
Sbjct: 78 ----LTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH---ENKIL 130
Query: 646 HCDLKPSNVLLDNDMTAHMGDFGLTR--------FIPEVMSSNQCSSVGLKGTVGYATP- 696
H DLKP N+L++ +GDFGL R F EV++ + L G+ Y+T
Sbjct: 131 HRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSI 190
Query: 697 ---EYGILLLEIFTGK 709
G +L E+ TGK
Sbjct: 191 DIWSCGCILAEMITGK 206
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 59/117 (50%), Gaps = 20/117 (17%)
Query: 611 ESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLT 670
E+C R + ++ SALEYLH K I+H DLKP N+LL+ DM + DFG
Sbjct: 129 ETCTRFYT--------AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTA 177
Query: 671 RFI-PEVMSSNQCSSVGLKGTVGYATPEYGILLLEIFTGKRPTSDMFTEGLDLHNFV 726
+ + PE S Q + GT Y +PE LL E K +SD++ G ++ V
Sbjct: 178 KVLSPE---SKQARANAFVGTAQYVSPE---LLTEKSACK--SSDLWALGCIIYQLV 226
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 86/197 (43%), Gaps = 40/197 (20%)
Query: 549 IAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDF---------QGNYF 597
+AVK++ Q +L+ E + ++ + H N+VK+ T G F
Sbjct: 42 VAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVF 101
Query: 598 RALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD 657
LV HG ++ F + + SA++Y H +K IVH DLK N+LLD
Sbjct: 102 DYLV----AHGRMKEKEARAKFRQ-------IVSAVQYCH---QKFIVHRDLKAENLLLD 147
Query: 658 NDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPEYGILLLEIFTGKR---PTSD 714
DM + DFG F E N+ + G YA P E+F GK+ P D
Sbjct: 148 ADMNIKIADFG---FSNEFTFGNKLDA--FCGAPPYAAP-------ELFQGKKYDGPEVD 195
Query: 715 MFTEGLDLHNFVKMALP 731
+++ G+ L+ V +LP
Sbjct: 196 VWSLGVILYTLVSGSLP 212
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 110/258 (42%), Gaps = 41/258 (15%)
Query: 520 RKDLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGAL--KSFMAECQALRNIRH 577
R+ L L V V+ G + T +A+K L + G + ++F+ E Q ++ +RH
Sbjct: 17 RESLRLEVKLGQGCFGEVWMGTWN-GTTRVAIKTL---KPGTMSPEAFLQEAQVMKKLRH 72
Query: 578 RNLVKIITACSTSDFQGNYFRALVYEFMHHGSL-----ESCPRILSFLRRLNIAIDVASA 632
LV++ S +V E+M G L + L + +++A +AS
Sbjct: 73 EKLVQLYAVVSEEPI------YIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASG 126
Query: 633 LEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVG 692
+ Y+ + VH DL+ +N+L+ ++ + DFGL R I + + + G K +
Sbjct: 127 MAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIED---NEYTARQGAKFPIK 180
Query: 693 YATPE---------------YGILLLEIFT-GKRPTSDMFT-EGLD-LHNFVKMALPDQI 734
+ PE +GILL E+ T G+ P M E LD + +M P +
Sbjct: 181 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPEC 240
Query: 735 LQVLDPLFLVGGVQEGEE 752
+ L L ++ EE
Sbjct: 241 PESLHDLMCQCWRKDPEE 258
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 59/117 (50%), Gaps = 20/117 (17%)
Query: 611 ESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLT 670
E+C R + ++ SALEYLH K I+H DLKP N+LL+ DM + DFG
Sbjct: 128 ETCTRFYT--------AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTA 176
Query: 671 RFI-PEVMSSNQCSSVGLKGTVGYATPEYGILLLEIFTGKRPTSDMFTEGLDLHNFV 726
+ + PE S Q + GT Y +PE LL E K +SD++ G ++ V
Sbjct: 177 KVLSPE---SKQARANSFVGTAQYVSPE---LLTEKSACK--SSDLWALGCIIYQLV 225
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 87/197 (44%), Gaps = 40/197 (20%)
Query: 549 IAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDF---------QGNYF 597
+AVK++ Q +L+ E + ++ + H N+VK+ T G F
Sbjct: 35 VAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVF 94
Query: 598 RALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD 657
LV HG ++ F + + SA++Y H +K IVH DLK N+LLD
Sbjct: 95 DYLV----AHGWMKEKEARAKFRQ-------IVSAVQYCH---QKFIVHRDLKAENLLLD 140
Query: 658 NDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPEYGILLLEIFTGKR---PTSD 714
DM + DFG F E N+ + G+ YA P E+F GK+ P D
Sbjct: 141 ADMNIKIADFG---FSNEFTFGNKLDTFC--GSPPYAAP-------ELFQGKKYDGPEVD 188
Query: 715 MFTEGLDLHNFVKMALP 731
+++ G+ L+ V +LP
Sbjct: 189 VWSLGVILYTLVSGSLP 205
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 110/269 (40%), Gaps = 63/269 (23%)
Query: 519 SRKDLLLNV-----SYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALR 573
R+D++L ++ + A + + + D+ +AVK L A + F E + L
Sbjct: 39 KRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLT 98
Query: 574 NIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSL------------------ESCPR 615
++H+++V+ C+ +G +V+E+M HG L + P
Sbjct: 99 MLQHQHIVRFFGVCT----EGRPL-LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPG 153
Query: 616 ILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPE 675
L + L +A VA+ + YL VH DL N L+ + +GDFG++R I
Sbjct: 154 PLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDI-- 208
Query: 676 VMSSNQCSSVGLKGT--VGYATPE---------------YGILLLEIFT-GKRP------ 711
S VG + + + PE +G++L EIFT GK+P
Sbjct: 209 --YSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN 266
Query: 712 --TSDMFTEGLDLHNFVKMALPDQILQVL 738
D T+G +L A P ++ ++
Sbjct: 267 TEAIDCITQGRELER--PRACPPEVYAIM 293
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 59/117 (50%), Gaps = 20/117 (17%)
Query: 611 ESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLT 670
E+C R + ++ SALEYLH K I+H DLKP N+LL+ DM + DFG
Sbjct: 132 ETCTRFYT--------AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTA 180
Query: 671 RFI-PEVMSSNQCSSVGLKGTVGYATPEYGILLLEIFTGKRPTSDMFTEGLDLHNFV 726
+ + PE S Q + GT Y +PE LL E K +SD++ G ++ V
Sbjct: 181 KVLSPE---SKQARANSFVGTAQYVSPE---LLTEKSACK--SSDLWALGCIIYQLV 229
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/258 (24%), Positives = 110/258 (42%), Gaps = 41/258 (15%)
Query: 520 RKDLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGAL--KSFMAECQALRNIRH 577
R+ L L V V+ G + T +A+K L + G + ++F+ E Q ++ +RH
Sbjct: 17 RESLRLEVKLGQGCFGEVWMGTWN-GTTRVAIKTL---KPGTMSPEAFLQEAQVMKKLRH 72
Query: 578 RNLVKIITACSTSDFQGNYFRALVYEFMHHGSL-----ESCPRILSFLRRLNIAIDVASA 632
LV++ S +V E+M G L + L + +++A +AS
Sbjct: 73 EKLVQLYAVVSEEPI------YIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASG 126
Query: 633 LEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVG 692
+ Y+ + VH DL+ +N+L+ ++ + DFGL R I + + + G K +
Sbjct: 127 MAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIED---NEYTARQGAKFPIK 180
Query: 693 YATPE---------------YGILLLEIFT-GKRPTSDMFT-EGLD-LHNFVKMALPDQI 734
+ PE +GILL E+ T G+ P M E LD + +M P +
Sbjct: 181 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPEC 240
Query: 735 LQVLDPLFLVGGVQEGEE 752
+ L L ++ EE
Sbjct: 241 PESLHDLMCQCWRKDPEE 258
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 59/117 (50%), Gaps = 20/117 (17%)
Query: 611 ESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLT 670
E+C R + ++ SALEYLH K I+H DLKP N+LL+ DM + DFG
Sbjct: 131 ETCTRFYT--------AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTA 179
Query: 671 RFI-PEVMSSNQCSSVGLKGTVGYATPEYGILLLEIFTGKRPTSDMFTEGLDLHNFV 726
+ + PE S Q + GT Y +PE LL E K +SD++ G ++ V
Sbjct: 180 KVLSPE---SKQARANXFVGTAQYVSPE---LLTEKSAXK--SSDLWALGCIIYQLV 228
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 87/197 (44%), Gaps = 40/197 (20%)
Query: 549 IAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDF---------QGNYF 597
+AV+++ Q +L+ E + ++ + H N+VK+ T G F
Sbjct: 42 VAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVF 101
Query: 598 RALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD 657
LV HG ++ F + + SA++Y H +K IVH DLK N+LLD
Sbjct: 102 DYLV----AHGRMKEKEARAKFRQ-------IVSAVQYCH---QKFIVHRDLKAENLLLD 147
Query: 658 NDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPEYGILLLEIFTGKR---PTSD 714
DM + DFG F E N+ + G+ YA P E+F GK+ P D
Sbjct: 148 ADMNIKIADFG---FSNEFTFGNKLDT--FCGSPPYAAP-------ELFQGKKYDGPEVD 195
Query: 715 MFTEGLDLHNFVKMALP 731
+++ G+ L+ V +LP
Sbjct: 196 VWSLGVILYTLVSGSLP 212
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 59/117 (50%), Gaps = 20/117 (17%)
Query: 611 ESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLT 670
E+C R + ++ SALEYLH K I+H DLKP N+LL+ DM + DFG
Sbjct: 128 ETCTRFYT--------AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTA 176
Query: 671 RFI-PEVMSSNQCSSVGLKGTVGYATPEYGILLLEIFTGKRPTSDMFTEGLDLHNFV 726
+ + PE S Q + GT Y +PE LL E K +SD++ G ++ V
Sbjct: 177 KVLSPE---SKQARANXFVGTAQYVSPE---LLTEKSACK--SSDLWALGCIIYQLV 225
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 59/117 (50%), Gaps = 20/117 (17%)
Query: 611 ESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLT 670
E+C R + ++ SALEYLH K I+H DLKP N+LL+ DM + DFG
Sbjct: 107 ETCTRFYT--------AEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTA 155
Query: 671 RFI-PEVMSSNQCSSVGLKGTVGYATPEYGILLLEIFTGKRPTSDMFTEGLDLHNFV 726
+ + PE S Q + GT Y +PE LL E K +SD++ G ++ V
Sbjct: 156 KVLSPE---SKQARANXFVGTAQYVSPE---LLTEKSACK--SSDLWALGCIIYQLV 204
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 59/117 (50%), Gaps = 20/117 (17%)
Query: 611 ESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLT 670
E+C R + ++ SALEYLH K I+H DLKP N+LL+ DM + DFG
Sbjct: 108 ETCTRFYT--------AEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTA 156
Query: 671 RFI-PEVMSSNQCSSVGLKGTVGYATPEYGILLLEIFTGKRPTSDMFTEGLDLHNFV 726
+ + PE S Q + GT Y +PE LL E K +SD++ G ++ V
Sbjct: 157 KVLSPE---SKQARANXFVGTAQYVSPE---LLTEKSACK--SSDLWALGCIIYQLV 205
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 59/117 (50%), Gaps = 20/117 (17%)
Query: 611 ESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLT 670
E+C R + ++ SALEYLH K I+H DLKP N+LL+ DM + DFG
Sbjct: 113 ETCTRFYT--------AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTA 161
Query: 671 RFI-PEVMSSNQCSSVGLKGTVGYATPEYGILLLEIFTGKRPTSDMFTEGLDLHNFV 726
+ + PE S Q + GT Y +PE LL E K +SD++ G ++ V
Sbjct: 162 KVLSPE---SKQARANXFVGTAQYVSPE---LLTEKSACK--SSDLWALGCIIYQLV 210
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 86/191 (45%), Gaps = 24/191 (12%)
Query: 535 ATVYKGILDLDQTFIAVKVLFL-HQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQ 593
ATVYKG L +A+K + L H+ GA + + E L++++H N+V + T
Sbjct: 16 ATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSL 75
Query: 594 GNYFRALVYEFMHHG---SLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLK 650
LV+E++ L+ C I++ + L Y H ++ ++H DLK
Sbjct: 76 -----TLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCH---RQKVLHRDLK 127
Query: 651 PSNVLLDNDMTAHMGDFGLTRF--IPEVMSSNQCSSVGLK------GTVGYATP----EY 698
P N+L++ + DFGL R IP N+ ++ + G+ Y+T
Sbjct: 128 PQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGV 187
Query: 699 GILLLEIFTGK 709
G + E+ TG+
Sbjct: 188 GCIFYEMATGR 198
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 90/197 (45%), Gaps = 39/197 (19%)
Query: 549 IAVKVLFLHQRGALKSF------MAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602
+AVK+L R ++S E Q L+ RH +++K+ ST ++F + Y
Sbjct: 39 VAVKIL---NRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPT---DFFMVMEY 92
Query: 603 --------EFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNV 654
HG +E RRL I SA++Y H H +VH DLKP NV
Sbjct: 93 VSGGELFDYICKHGRVEEME-----ARRLFQQI--LSAVDYCHRHM---VVHRDLKPENV 142
Query: 655 LLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPEYGILLLEIFTGKRPTSD 714
LLD M A + DFGL+ +MS + G+ YA PE ++ ++ G P D
Sbjct: 143 LLDAHMNAKIADFGLS----NMMSDGEFLRTSC-GSPNYAAPE--VISGRLYAG--PEVD 193
Query: 715 MFTEGLDLHNFVKMALP 731
+++ G+ L+ + LP
Sbjct: 194 IWSCGVILYALLCGTLP 210
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 59/117 (50%), Gaps = 20/117 (17%)
Query: 611 ESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLT 670
E+C R + ++ SALEYLH K I+H DLKP N+LL+ DM + DFG
Sbjct: 106 ETCTRFYT--------AEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTA 154
Query: 671 RFI-PEVMSSNQCSSVGLKGTVGYATPEYGILLLEIFTGKRPTSDMFTEGLDLHNFV 726
+ + PE S Q + GT Y +PE LL E K +SD++ G ++ V
Sbjct: 155 KVLSPE---SKQARANXFVGTAQYVSPE---LLTEKSACK--SSDLWALGCIIYQLV 203
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 90/198 (45%), Gaps = 41/198 (20%)
Query: 549 IAVKVLFLHQRGALKSF------MAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602
+AVK+L R ++S E Q L+ RH +++K+ ST ++F + Y
Sbjct: 39 VAVKIL---NRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPT---DFFMVMEY 92
Query: 603 --------EFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNV 654
HG +E RRL I SA++Y H H +VH DLKP NV
Sbjct: 93 VSGGELFDYICKHGRVEEME-----ARRLFQQI--LSAVDYCHRHM---VVHRDLKPENV 142
Query: 655 LLDNDMTAHMGDFGLTRFIPE-VMSSNQCSSVGLKGTVGYATPEYGILLLEIFTGKRPTS 713
LLD M A + DFGL+ + + + C G+ YA PE ++ ++ G P
Sbjct: 143 LLDAHMNAKIADFGLSNMMSDGEFLRDSC------GSPNYAAPE--VISGRLYAG--PEV 192
Query: 714 DMFTEGLDLHNFVKMALP 731
D+++ G+ L+ + LP
Sbjct: 193 DIWSCGVILYALLCGTLP 210
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 59/117 (50%), Gaps = 20/117 (17%)
Query: 611 ESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLT 670
E+C R + ++ SALEYLH K I+H DLKP N+LL+ DM + DFG
Sbjct: 129 ETCTRFYT--------AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTA 177
Query: 671 RFI-PEVMSSNQCSSVGLKGTVGYATPEYGILLLEIFTGKRPTSDMFTEGLDLHNFV 726
+ + PE S Q + GT Y +PE LL E K +SD++ G ++ V
Sbjct: 178 KVLSPE---SKQARANXFVGTAQYVSPE---LLTEKSACK--SSDLWALGCIIYQLV 226
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 59/117 (50%), Gaps = 20/117 (17%)
Query: 611 ESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLT 670
E+C R + ++ SALEYLH K I+H DLKP N+LL+ DM + DFG
Sbjct: 109 ETCTRFYT--------AEIVSALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTA 157
Query: 671 RFI-PEVMSSNQCSSVGLKGTVGYATPEYGILLLEIFTGKRPTSDMFTEGLDLHNFV 726
+ + PE S Q + GT Y +PE LL E K +SD++ G ++ V
Sbjct: 158 KVLSPE---SKQARANXFVGTAQYVSPE---LLTEKSACK--SSDLWALGCIIYQLV 206
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 59/117 (50%), Gaps = 20/117 (17%)
Query: 611 ESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLT 670
E+C R + ++ SALEYLH K I+H DLKP N+LL+ DM + DFG
Sbjct: 129 ETCTRFYT--------AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTA 177
Query: 671 RFI-PEVMSSNQCSSVGLKGTVGYATPEYGILLLEIFTGKRPTSDMFTEGLDLHNFV 726
+ + PE S Q + GT Y +PE LL E K +SD++ G ++ V
Sbjct: 178 KVLSPE---SKQARANXFVGTAQYVSPE---LLTEKSACK--SSDLWALGCIIYQLV 226
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 59/117 (50%), Gaps = 20/117 (17%)
Query: 611 ESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLT 670
E+C R + ++ SALEYLH K I+H DLKP N+LL+ DM + DFG
Sbjct: 131 ETCTRFYT--------AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTA 179
Query: 671 RFI-PEVMSSNQCSSVGLKGTVGYATPEYGILLLEIFTGKRPTSDMFTEGLDLHNFV 726
+ + PE S Q + GT Y +PE LL E K +SD++ G ++ V
Sbjct: 180 KVLSPE---SKQARANXFVGTAQYVSPE---LLTEKSACK--SSDLWALGCIIYQLV 228
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 59/117 (50%), Gaps = 20/117 (17%)
Query: 611 ESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLT 670
E+C R + ++ SALEYLH K I+H DLKP N+LL+ DM + DFG
Sbjct: 131 ETCTRFYT--------AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTA 179
Query: 671 RFI-PEVMSSNQCSSVGLKGTVGYATPEYGILLLEIFTGKRPTSDMFTEGLDLHNFV 726
+ + PE S Q + GT Y +PE LL E K +SD++ G ++ V
Sbjct: 180 KVLSPE---SKQARANXFVGTAQYVSPE---LLTEKSACK--SSDLWALGCIIYQLV 228
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 59/117 (50%), Gaps = 20/117 (17%)
Query: 611 ESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLT 670
E+C R + ++ SALEYLH K I+H DLKP N+LL+ DM + DFG
Sbjct: 134 ETCTRFYT--------AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTA 182
Query: 671 RFI-PEVMSSNQCSSVGLKGTVGYATPEYGILLLEIFTGKRPTSDMFTEGLDLHNFV 726
+ + PE S Q + GT Y +PE LL E K +SD++ G ++ V
Sbjct: 183 KVLSPE---SKQARANXFVGTAQYVSPE---LLTEKSACK--SSDLWALGCIIYQLV 231
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 59/117 (50%), Gaps = 20/117 (17%)
Query: 611 ESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLT 670
E+C R + ++ SALEYLH K I+H DLKP N+LL+ DM + DFG
Sbjct: 129 ETCTRFYT--------AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTA 177
Query: 671 RFI-PEVMSSNQCSSVGLKGTVGYATPEYGILLLEIFTGKRPTSDMFTEGLDLHNFV 726
+ + PE S Q + GT Y +PE LL E K +SD++ G ++ V
Sbjct: 178 KVLSPE---SKQARANXFVGTAQYVSPE---LLTEKSACK--SSDLWALGCIIYQLV 226
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 59/117 (50%), Gaps = 20/117 (17%)
Query: 611 ESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLT 670
E+C R + ++ SALEYLH K I+H DLKP N+LL+ DM + DFG
Sbjct: 132 ETCTRFYT--------AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTA 180
Query: 671 RFI-PEVMSSNQCSSVGLKGTVGYATPEYGILLLEIFTGKRPTSDMFTEGLDLHNFV 726
+ + PE S Q + GT Y +PE LL E K +SD++ G ++ V
Sbjct: 181 KVLSPE---SKQARANXFVGTAQYVSPE---LLTEKSACK--SSDLWALGCIIYQLV 229
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 59/117 (50%), Gaps = 20/117 (17%)
Query: 611 ESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLT 670
E+C R + ++ SALEYLH K I+H DLKP N+LL+ DM + DFG
Sbjct: 131 ETCTRFYT--------AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTA 179
Query: 671 RFI-PEVMSSNQCSSVGLKGTVGYATPEYGILLLEIFTGKRPTSDMFTEGLDLHNFV 726
+ + PE S Q + GT Y +PE LL E K +SD++ G ++ V
Sbjct: 180 KVLSPE---SKQARANXFVGTAQYVSPE---LLTEKSACK--SSDLWALGCIIYQLV 228
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 59/117 (50%), Gaps = 20/117 (17%)
Query: 611 ESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLT 670
E+C R + ++ SALEYLH K I+H DLKP N+LL+ DM + DFG
Sbjct: 131 ETCTRFYT--------AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTA 179
Query: 671 RFI-PEVMSSNQCSSVGLKGTVGYATPEYGILLLEIFTGKRPTSDMFTEGLDLHNFV 726
+ + PE S Q + GT Y +PE LL E K +SD++ G ++ V
Sbjct: 180 KVLSPE---SKQARANXFVGTAQYVSPE---LLTEKSACK--SSDLWALGCIIYQLV 228
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 50/104 (48%), Gaps = 25/104 (24%)
Query: 626 AIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSV 685
A +V ALEYLH K I++ DLKP N+LLD + + DFG +++P+V +
Sbjct: 112 AAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV-------TY 161
Query: 686 GLKGTVGYATPE---------------YGILLLEIFTGKRPTSD 714
L GT Y PE +GIL+ E+ G P D
Sbjct: 162 XLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYD 205
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 86/197 (43%), Gaps = 40/197 (20%)
Query: 549 IAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDF---------QGNYF 597
+AV+++ Q +L+ E + ++ + H N+VK+ T G F
Sbjct: 42 VAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVF 101
Query: 598 RALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD 657
LV HG ++ F + + SA++Y H +K IVH DLK N+LLD
Sbjct: 102 DYLV----AHGRMKEKEARAKFRQ-------IVSAVQYCH---QKFIVHRDLKAENLLLD 147
Query: 658 NDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPEYGILLLEIFTGKR---PTSD 714
DM + DFG F E N+ G+ YA P E+F GK+ P D
Sbjct: 148 ADMNIKIADFG---FSNEFTFGNKLDE--FCGSPPYAAP-------ELFQGKKYDGPEVD 195
Query: 715 MFTEGLDLHNFVKMALP 731
+++ G+ L+ V +LP
Sbjct: 196 VWSLGVILYTLVSGSLP 212
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 103/245 (42%), Gaps = 54/245 (22%)
Query: 519 SRKDLLLNV-----SYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALR 573
R+D++L ++ + A + + + D+ +AVK L A + F E + L
Sbjct: 10 KRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLT 69
Query: 574 NIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSL------------------ESCPR 615
++H+++V+ C+ +G +V+E+M HG L + P
Sbjct: 70 MLQHQHIVRFFGVCT----EGRPL-LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPG 124
Query: 616 ILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPE 675
L + L +A VA+ + YL VH DL N L+ + +GDFG++R I
Sbjct: 125 PLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDI-- 179
Query: 676 VMSSNQCSSVGLKGT--VGYATPE---------------YGILLLEIFT-GKRPTSDMF- 716
S VG + + + PE +G++L EIFT GK+P +
Sbjct: 180 --YSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN 237
Query: 717 TEGLD 721
TE +D
Sbjct: 238 TEAID 242
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 83/198 (41%), Gaps = 44/198 (22%)
Query: 537 VYKGILDLDQTFIAVKVLFLHQRGALKS-FMAECQALRNIRHRNLVKIITACSTSDFQGN 595
V+ G L D T +AVK LK+ F+ E + L+ H N+V++I C+ Q
Sbjct: 130 VFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQK--QPI 187
Query: 596 YFRALVYEFMHHGSLESCPRILSFLR----RLNIAI------DVASALEYLHHHCKKPIV 645
Y +V E + G L+FLR RL + D A+ +EYL C +
Sbjct: 188 Y---IVMELVQGGDF------LTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---CI 235
Query: 646 HCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGT-VGYATPE------- 697
H DL N L+ + DFG++R E +S GL+ V + PE
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSR---EEADGVXAASGGLRQVPVKWTAPEALNYGRY 292
Query: 698 --------YGILLLEIFT 707
+GILL E F+
Sbjct: 293 SSESDVWSFGILLWETFS 310
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 59/117 (50%), Gaps = 20/117 (17%)
Query: 611 ESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLT 670
E+C R + ++ SALEYLH K I+H DLKP N+LL+ DM + DFG
Sbjct: 136 ETCTRFYT--------AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTA 184
Query: 671 RFI-PEVMSSNQCSSVGLKGTVGYATPEYGILLLEIFTGKRPTSDMFTEGLDLHNFV 726
+ + PE S Q + GT Y +PE LL E K +SD++ G ++ V
Sbjct: 185 KVLSPE---SKQARANXFVGTAQYVSPE---LLTEKSACK--SSDLWALGCIIYQLV 233
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 103/245 (42%), Gaps = 54/245 (22%)
Query: 519 SRKDLLLNV-----SYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALR 573
R+D++L ++ + A + + + D+ +AVK L A + F E + L
Sbjct: 16 KRRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLT 75
Query: 574 NIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSL------------------ESCPR 615
++H+++V+ C+ +G +V+E+M HG L + P
Sbjct: 76 MLQHQHIVRFFGVCT----EGRPL-LMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPG 130
Query: 616 ILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPE 675
L + L +A VA+ + YL VH DL N L+ + +GDFG++R I
Sbjct: 131 PLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDI-- 185
Query: 676 VMSSNQCSSVGLKGT--VGYATPE---------------YGILLLEIFT-GKRPTSDMF- 716
S VG + + + PE +G++L EIFT GK+P +
Sbjct: 186 --YSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN 243
Query: 717 TEGLD 721
TE +D
Sbjct: 244 TEAID 248
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/212 (23%), Positives = 99/212 (46%), Gaps = 40/212 (18%)
Query: 546 QTFIAVKVLFLHQRGAL--KSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYE 603
T +AVK L ++G++ +F+AE ++ ++H+ LV++ + ++ E
Sbjct: 33 HTKVAVKSL---KQGSMSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIY------IITE 83
Query: 604 FMHHGSLESCPRI-----LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN 658
+M +GSL + L+ + L++A +A + ++ ++ +H +L+ +N+L+ +
Sbjct: 84 YMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRNLRAANILVSD 140
Query: 659 DMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLL 703
++ + DFGL R I + + + G K + + PE +GILL
Sbjct: 141 TLSCKIADFGLARLIED---NEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLT 197
Query: 704 EIFT-GKRPTSDMFTEGL--DLHNFVKMALPD 732
EI T G+ P M + +L +M PD
Sbjct: 198 EIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD 229
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 67/130 (51%), Gaps = 11/130 (8%)
Query: 549 IAVKVLFLHQRG-ALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHH 607
+AVK L G + E + LRN+ H N+VK C+ GN + L+ EF+
Sbjct: 53 VAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDG--GNGIK-LIMEFLPS 109
Query: 608 GSL-ESCPR---ILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAH 663
GSL E P+ ++ ++L A+ + ++YL + VH DL NVL++++
Sbjct: 110 GSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVK 166
Query: 664 MGDFGLTRFI 673
+GDFGLT+ I
Sbjct: 167 IGDFGLTKAI 176
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 83/198 (41%), Gaps = 44/198 (22%)
Query: 537 VYKGILDLDQTFIAVKVLFLHQRGALKS-FMAECQALRNIRHRNLVKIITACSTSDFQGN 595
V+ G L D T +AVK LK+ F+ E + L+ H N+V++I C+ Q
Sbjct: 130 VFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQK--QPI 187
Query: 596 YFRALVYEFMHHGSLESCPRILSFLR----RLNIAI------DVASALEYLHHHCKKPIV 645
Y +V E + G L+FLR RL + D A+ +EYL C +
Sbjct: 188 Y---IVMELVQGGDF------LTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC---CI 235
Query: 646 HCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGT-VGYATPE------- 697
H DL N L+ + DFG++R E +S GL+ V + PE
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSR---EEADGVYAASGGLRQVPVKWTAPEALNYGRY 292
Query: 698 --------YGILLLEIFT 707
+GILL E F+
Sbjct: 293 SSESDVWSFGILLWETFS 310
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 67/130 (51%), Gaps = 11/130 (8%)
Query: 549 IAVKVLFLHQRG-ALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHH 607
+AVK L G + E + LRN+ H N+VK C+ GN + L+ EF+
Sbjct: 41 VAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDG--GNGIK-LIMEFLPS 97
Query: 608 GSL-ESCPR---ILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAH 663
GSL E P+ ++ ++L A+ + ++YL + VH DL NVL++++
Sbjct: 98 GSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVK 154
Query: 664 MGDFGLTRFI 673
+GDFGLT+ I
Sbjct: 155 IGDFGLTKAI 164
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 84/189 (44%), Gaps = 42/189 (22%)
Query: 549 IAVKVLFL---HQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY--- 602
+A+K +F+ + LK F E + H+N+V +I D Y+ + Y
Sbjct: 39 VAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDC---YYLVMEYIEG 95
Query: 603 ----EFMH-HGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD 657
E++ HG L S ++F ++ L+ + H IVH D+KP N+L+D
Sbjct: 96 PTLSEYIESHGPL-SVDTAINFTNQI---------LDGIKHAHDMRIVHRDIKPQNILID 145
Query: 658 NDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPEY---------------GILL 702
++ T + DFG+ + + E S Q + V GTV Y +PE GI+L
Sbjct: 146 SNKTLKIFDFGIAKALSET-SLTQTNHV--LGTVQYFSPEQAKGEATDECTDIYSIGIVL 202
Query: 703 LEIFTGKRP 711
E+ G+ P
Sbjct: 203 YEMLVGEPP 211
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 84/204 (41%), Gaps = 25/204 (12%)
Query: 535 ATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRN--IRHRNLVKIITACSTSDF 592
VYKG LD+ +AVKV R ++F+ E R + H N+ + I
Sbjct: 27 GAVYKG--SLDERPVAVKVFSFANR---QNFINEKNIYRVPLMEHDNIARFIVGDERVTA 81
Query: 593 QGNYFRALVYEFMHHGSLESCPRILS--FLRRLNIAIDVASALEYLH------HHCKKPI 644
G LV E+ +GSL + + ++ +A V L YLH H K I
Sbjct: 82 DGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAI 141
Query: 645 VHCDLKPSNVLLDNDMTAHMGDFGLT------RFIPEVMSSNQCSSVGLKGTVGYATPEY 698
H DL NVL+ ND T + DFGL+ R + N +++ GT+ Y PE
Sbjct: 142 SHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDN--AAISEVGTIRYMAPEV 199
Query: 699 --GILLLEIFTGKRPTSDMFTEGL 720
G + L DM+ GL
Sbjct: 200 LEGAVNLRDXESALKQVDMYALGL 223
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 63/131 (48%), Gaps = 9/131 (6%)
Query: 548 FIAVKVLFLHQRGALKS-FMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMH 606
+AVK L L+S + E + LR + H ++VK C QG LV E++
Sbjct: 40 MVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCED---QGEKSVQLVMEYVP 96
Query: 607 HGSL-ESCPR-ILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHM 664
GSL + PR + + L A + + YLH + +H L NVLLDND +
Sbjct: 97 LGSLRDYLPRHCVGLAQLLLFAQQICEGMAYLH---AQHYIHRALAARNVLLDNDRLVKI 153
Query: 665 GDFGLTRFIPE 675
GDFGL + +PE
Sbjct: 154 GDFGLAKAVPE 164
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 89/202 (44%), Gaps = 50/202 (24%)
Query: 549 IAVKVLFLHQRG--ALKSFMAECQALRNIRHRNLVKIITACSTSDF---------QGNYF 597
+A+K++ Q +L+ E + ++ + H N+VK+ T G F
Sbjct: 40 VAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVF 99
Query: 598 RALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD 657
LV HG ++ F + + SA++Y H +K IVH DLK N+LLD
Sbjct: 100 DYLV----AHGRMKEKEARSKFRQ-------IVSAVQYCH---QKRIVHRDLKAENLLLD 145
Query: 658 NDMTAHMGDFGLTRFIPEVMSSNQCSSVGLK-----GTVGYATPEYGILLLEIFTGKR-- 710
DM + DFG SN+ +VG K G+ YA P E+F GK+
Sbjct: 146 ADMNIKIADFGF---------SNEF-TVGGKLDTFCGSPPYAAP-------ELFQGKKYD 188
Query: 711 -PTSDMFTEGLDLHNFVKMALP 731
P D+++ G+ L+ V +LP
Sbjct: 189 GPEVDVWSLGVILYTLVSGSLP 210
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 90/192 (46%), Gaps = 30/192 (15%)
Query: 546 QTFIAVKVLFL-HQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEF 604
+ F+A+K L + + F++E + H N++ + + S ++ EF
Sbjct: 35 EIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPV-----MIITEF 89
Query: 605 MHHGSLESCPRI----LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDM 660
M +GSL+S R + ++ + + +A+ ++YL VH L N+L+++++
Sbjct: 90 MENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYL---ADMNYVHRALAARNILVNSNL 146
Query: 661 TAHMGDFGLTRFIPEVMSS-NQCSSVGLKGTVGYATPE---------------YGILLLE 704
+ DFGL+RF+ + S S++G K + + PE YGI++ E
Sbjct: 147 VCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWE 206
Query: 705 IFT-GKRPTSDM 715
+ + G+RP DM
Sbjct: 207 VMSYGERPYWDM 218
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 63/131 (48%), Gaps = 9/131 (6%)
Query: 548 FIAVKVLFLHQRGALKS-FMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMH 606
+AVK L L+S + E + LR + H ++VK C QG LV E++
Sbjct: 39 MVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKYKGCCED---QGEKSVQLVMEYVP 95
Query: 607 HGSL-ESCPR-ILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHM 664
GSL + PR + + L A + + YLH + +H L NVLLDND +
Sbjct: 96 LGSLRDYLPRHCVGLAQLLLFAQQICEGMAYLH---AQHYIHRALAARNVLLDNDRLVKI 152
Query: 665 GDFGLTRFIPE 675
GDFGL + +PE
Sbjct: 153 GDFGLAKAVPE 163
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 85/187 (45%), Gaps = 35/187 (18%)
Query: 549 IAVKVL---FLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFM 605
+AVK L L Q A+ F+ E A+ ++ HRNL+++ T + +V E
Sbjct: 43 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK------MVTELA 96
Query: 606 HHGSLESCPR------ILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDND 659
GSL R +L L R A+ VA + YL K +H DL N+LL
Sbjct: 97 PLGSLLDRLRKHQGHFLLGTLSRY--AVQVAEGMGYLE---SKRFIHRDLAARNLLLATR 151
Query: 660 MTAHMGDFGLTRFIPE-----VMSSNQ------CSSVGLKG-TVGYA--TPEYGILLLEI 705
+GDFGL R +P+ VM ++ C+ LK T +A T +G+ L E+
Sbjct: 152 DLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEM 211
Query: 706 FT-GKRP 711
FT G+ P
Sbjct: 212 FTYGQEP 218
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 85/195 (43%), Gaps = 47/195 (24%)
Query: 568 ECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESCPRILSFLR-----R 622
E + ++H N++ + C + N LV EF G L R+LS R
Sbjct: 56 EAKLFAMLKHPNIIALRGVCLK---EPNL--CLVMEFARGGPLN---RVLSGKRIPPDIL 107
Query: 623 LNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLL-----DNDMT---AHMGDFGLTRFIP 674
+N A+ +A + YLH PI+H DLK SN+L+ + D++ + DFGL R
Sbjct: 108 VNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR--- 164
Query: 675 EVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEG 719
++ + + G + PE YG+LL E+ TG+ P + +G
Sbjct: 165 ---EWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGI--DG 219
Query: 720 LDLHNFV---KMALP 731
L + V K+ALP
Sbjct: 220 LAVAYGVAMNKLALP 234
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 88/190 (46%), Gaps = 25/190 (13%)
Query: 549 IAVKVLFLHQRGALK---SFMAECQALRNIRHRNLVKIITACST-SDFQGNYFRALVYEF 604
+AVK+L + +L E Q L+ RH +++K+ ST SD +V E+
Sbjct: 44 VAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDI------FMVMEY 97
Query: 605 MHHGSLES--CPR-ILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMT 661
+ G L C L + + S ++Y H H +VH DLKP NVLLD M
Sbjct: 98 VSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHM---VVHRDLKPENVLLDAHMN 154
Query: 662 AHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPEYGILLLEIFTGKRPTSDMFTEGLD 721
A + DFGL+ +MS + G+ YA PE ++ ++ G P D+++ G+
Sbjct: 155 AKIADFGLS----NMMSDGEFLRXSC-GSPNYAAPE--VISGRLYAG--PEVDIWSSGVI 205
Query: 722 LHNFVKMALP 731
L+ + LP
Sbjct: 206 LYALLCGTLP 215
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 88/202 (43%), Gaps = 50/202 (24%)
Query: 549 IAVKVLFLHQRG--ALKSFMAECQALRNIRHRNLVKIITACSTSDF---------QGNYF 597
+A+K++ Q +L+ E + ++ + H N+VK+ T G F
Sbjct: 43 VAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVF 102
Query: 598 RALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD 657
LV HG ++ F + + SA++Y H +K IVH DLK N+LLD
Sbjct: 103 DYLV----AHGRMKEKEARSKFRQ-------IVSAVQYCH---QKRIVHRDLKAENLLLD 148
Query: 658 NDMTAHMGDFGLTRFIPEVMSSNQCSSVGLK-----GTVGYATPEYGILLLEIFTGKR-- 710
DM + DFG SN+ +VG K G YA P E+F GK+
Sbjct: 149 ADMNIKIADFGF---------SNEF-TVGGKLDAFCGAPPYAAP-------ELFQGKKYD 191
Query: 711 -PTSDMFTEGLDLHNFVKMALP 731
P D+++ G+ L+ V +LP
Sbjct: 192 GPEVDVWSLGVILYTLVSGSLP 213
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 85/187 (45%), Gaps = 35/187 (18%)
Query: 549 IAVKVL---FLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFM 605
+AVK L L Q A+ F+ E A+ ++ HRNL+++ T + +V E
Sbjct: 49 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK------MVTELA 102
Query: 606 HHGSLESCPR------ILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDND 659
GSL R +L L R A+ VA + YL K +H DL N+LL
Sbjct: 103 PLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---SKRFIHRDLAARNLLLATR 157
Query: 660 MTAHMGDFGLTRFIPE-----VMSSNQ------CSSVGLKG-TVGYA--TPEYGILLLEI 705
+GDFGL R +P+ VM ++ C+ LK T +A T +G+ L E+
Sbjct: 158 DLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEM 217
Query: 706 FT-GKRP 711
FT G+ P
Sbjct: 218 FTYGQEP 224
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 85/187 (45%), Gaps = 35/187 (18%)
Query: 549 IAVKVL---FLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFM 605
+AVK L L Q A+ F+ E A+ ++ HRNL+++ T + +V E
Sbjct: 49 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK------MVTELA 102
Query: 606 HHGSLESCPR------ILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDND 659
GSL R +L L R A+ VA + YL K +H DL N+LL
Sbjct: 103 PLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---SKRFIHRDLAARNLLLATR 157
Query: 660 MTAHMGDFGLTRFIPE-----VMSSNQ------CSSVGLKG-TVGYA--TPEYGILLLEI 705
+GDFGL R +P+ VM ++ C+ LK T +A T +G+ L E+
Sbjct: 158 DLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEM 217
Query: 706 FT-GKRP 711
FT G+ P
Sbjct: 218 FTYGQEP 224
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 85/187 (45%), Gaps = 35/187 (18%)
Query: 549 IAVKVL---FLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFM 605
+AVK L L Q A+ F+ E A+ ++ HRNL+++ T + +V E
Sbjct: 39 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK------MVTELA 92
Query: 606 HHGSLESCPR------ILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDND 659
GSL R +L L R A+ VA + YL K +H DL N+LL
Sbjct: 93 PLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---SKRFIHRDLAARNLLLATR 147
Query: 660 MTAHMGDFGLTRFIPE-----VMSSNQ------CSSVGLKG-TVGYA--TPEYGILLLEI 705
+GDFGL R +P+ VM ++ C+ LK T +A T +G+ L E+
Sbjct: 148 DLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEM 207
Query: 706 FT-GKRP 711
FT G+ P
Sbjct: 208 FTYGQEP 214
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 79/166 (47%), Gaps = 31/166 (18%)
Query: 545 DQTFIAVKVLFLHQRGAL------KSFMAECQAL-RNIRHRNLVKIITACSTSDFQGNYF 597
++ F AVKVL Q+ A+ K M+E L +N++H LV + + T+D +
Sbjct: 62 EEVFYAVKVL---QKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTAD---KLY 115
Query: 598 RALVY----EFMHHGSLESCPRILSFL--RRLNIAIDVASALEYLHHHCKKPIVHCDLKP 651
L Y E +H E C FL R A ++ASAL YLH IV+ DLKP
Sbjct: 116 FVLDYINGGELFYHLQRERC-----FLEPRARFYAAEIASALGYLH---SLNIVYRDLKP 167
Query: 652 SNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE 697
N+LLD+ + DFGL + E + N +S GT Y PE
Sbjct: 168 ENILLDSQGHIVLTDFGLCK---ENIEHNSTTST-FCGTPEYLAPE 209
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 85/187 (45%), Gaps = 35/187 (18%)
Query: 549 IAVKVL---FLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFM 605
+AVK L L Q A+ F+ E A+ ++ HRNL+++ T + +V E
Sbjct: 39 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK------MVTELA 92
Query: 606 HHGSLESCPR------ILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDND 659
GSL R +L L R A+ VA + YL K +H DL N+LL
Sbjct: 93 PLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---SKRFIHRDLAARNLLLATR 147
Query: 660 MTAHMGDFGLTRFIPE-----VMSSNQ------CSSVGLKG-TVGYA--TPEYGILLLEI 705
+GDFGL R +P+ VM ++ C+ LK T +A T +G+ L E+
Sbjct: 148 DLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEM 207
Query: 706 FT-GKRP 711
FT G+ P
Sbjct: 208 FTYGQEP 214
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 85/187 (45%), Gaps = 35/187 (18%)
Query: 549 IAVKVL---FLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFM 605
+AVK L L Q A+ F+ E A+ ++ HRNL+++ T + +V E
Sbjct: 43 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK------MVTELA 96
Query: 606 HHGSLESCPR------ILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDND 659
GSL R +L L R A+ VA + YL K +H DL N+LL
Sbjct: 97 PLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---SKRFIHRDLAARNLLLATR 151
Query: 660 MTAHMGDFGLTRFIPE-----VMSSNQ------CSSVGLKG-TVGYA--TPEYGILLLEI 705
+GDFGL R +P+ VM ++ C+ LK T +A T +G+ L E+
Sbjct: 152 DLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEM 211
Query: 706 FT-GKRP 711
FT G+ P
Sbjct: 212 FTYGQEP 218
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 85/187 (45%), Gaps = 35/187 (18%)
Query: 549 IAVKVL---FLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFM 605
+AVK L L Q A+ F+ E A+ ++ HRNL+++ T + +V E
Sbjct: 39 VAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMK------MVTELA 92
Query: 606 HHGSLESCPR------ILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDND 659
GSL R +L L R A+ VA + YL K +H DL N+LL
Sbjct: 93 PLGSLLDRLRKHQGHFLLGTLSR--YAVQVAEGMGYLE---SKRFIHRDLAARNLLLATR 147
Query: 660 MTAHMGDFGLTRFIPE-----VMSSNQ------CSSVGLKG-TVGYA--TPEYGILLLEI 705
+GDFGL R +P+ VM ++ C+ LK T +A T +G+ L E+
Sbjct: 148 DLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEM 207
Query: 706 FT-GKRP 711
FT G+ P
Sbjct: 208 FTYGQEP 214
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 68/153 (44%), Gaps = 10/153 (6%)
Query: 548 FIAVKVLFLHQRGALKS-FMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMH 606
+AVK L +S + E LR + H +++K C + G LV E++
Sbjct: 62 MVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDA---GAASLQLVMEYVP 118
Query: 607 HGSL-ESCPR-ILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHM 664
GSL + PR + + L A + + YLH + +H DL NVLLDND +
Sbjct: 119 LGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKI 175
Query: 665 GDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE 697
GDFGL + +PE + G YA PE
Sbjct: 176 GDFGLAKAVPEGHEXYRVREDGDSPVFWYA-PE 207
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 75/176 (42%), Gaps = 38/176 (21%)
Query: 563 KSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSL-------ESCPR 615
K+F+ E + L + H N+VK+ AC LV E+ GSL E P
Sbjct: 47 KAFIVELRQLSRVNHPNIVKLYGACLNP-------VCLVMEYAEGGSLYNVLHGAEPLP- 98
Query: 616 ILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTA-HMGDFGLTRFIP 674
+ ++ + + + YLH K ++H DLKP N+LL T + DFG I
Sbjct: 99 YYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQ 158
Query: 675 EVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDM 715
M++N KG+ + PE +GI+L E+ T ++P ++
Sbjct: 159 THMTNN-------KGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEI 207
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 75/176 (42%), Gaps = 38/176 (21%)
Query: 563 KSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSL-------ESCPR 615
K+F+ E + L + H N+VK+ AC LV E+ GSL E P
Sbjct: 46 KAFIVELRQLSRVNHPNIVKLYGACLNP-------VCLVMEYAEGGSLYNVLHGAEPLP- 97
Query: 616 ILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTA-HMGDFGLTRFIP 674
+ ++ + + + YLH K ++H DLKP N+LL T + DFG I
Sbjct: 98 YYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQ 157
Query: 675 EVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDM 715
M++N KG+ + PE +GI+L E+ T ++P ++
Sbjct: 158 THMTNN-------KGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEI 206
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 87/199 (43%), Gaps = 50/199 (25%)
Query: 546 QTFIAVKVLFLHQRGAL--KSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYE 603
T +AVK + + G++ ++F+AE ++ ++H LVK+ + ++ E
Sbjct: 39 HTKVAVKTM---KPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIY------IITE 89
Query: 604 FMHHGSLESCPRILSFLRR-----------LNIAIDVASALEYLHHHCKKPIVHCDLKPS 652
FM GSL L FL+ ++ + +A + ++ + +H DL+ +
Sbjct: 90 FMAKGSL------LDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQ---RNYIHRDLRAA 140
Query: 653 NVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE--------------- 697
N+L+ + + DFGL R I + + + G K + + PE
Sbjct: 141 NILVSASLVCKIADFGLARVIED---NEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWS 197
Query: 698 YGILLLEIFT-GKRPTSDM 715
+GILL+EI T G+ P M
Sbjct: 198 FGILLMEIVTYGRIPYPGM 216
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 87/223 (39%), Gaps = 46/223 (20%)
Query: 537 VYKGILDLDQTFIAVKVLF---LHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQ 593
VY + +A+KVLF L + G E + ++RH N++++
Sbjct: 50 VYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY--------- 100
Query: 594 GNYFR--ALVYEFMHHGSLESCPRILSFL------RRLNIAIDVASALEYLHHHCKKPIV 645
YF VY + + L + R L L R ++A+AL Y H K ++
Sbjct: 101 -GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVI 156
Query: 646 HCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPEY------- 698
H D+KP N+LL + + DFG + P + C GT+ Y PE
Sbjct: 157 HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC------GTLDYLPPEMIEGRMHD 210
Query: 699 --------GILLLEIFTGKRP-TSDMFTEGLDLHNFVKMALPD 732
G+L E GK P ++ + E + V+ PD
Sbjct: 211 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 253
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 87/223 (39%), Gaps = 46/223 (20%)
Query: 537 VYKGILDLDQTFIAVKVLF---LHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQ 593
VY + +A+KVLF L + G E + ++RH N++++
Sbjct: 50 VYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY--------- 100
Query: 594 GNYFR--ALVYEFMHHGSLESCPRILSFL------RRLNIAIDVASALEYLHHHCKKPIV 645
YF VY + + L + R L L R ++A+AL Y H K ++
Sbjct: 101 -GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVI 156
Query: 646 HCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPEY------- 698
H D+KP N+LL + + DFG + P + C GT+ Y PE
Sbjct: 157 HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC------GTLDYLPPEMIEGRMHD 210
Query: 699 --------GILLLEIFTGKRP-TSDMFTEGLDLHNFVKMALPD 732
G+L E GK P ++ + E + V+ PD
Sbjct: 211 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 253
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 88/199 (44%), Gaps = 50/199 (25%)
Query: 546 QTFIAVKVLFLHQRGAL--KSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYE 603
T +AVK + + G++ ++F+AE ++ ++H LVK+ + ++ E
Sbjct: 212 HTKVAVKTM---KPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIY------IITE 262
Query: 604 FMHHGSLESCPRILSFLRR-----------LNIAIDVASALEYLHHHCKKPIVHCDLKPS 652
FM GSL L FL+ ++ + +A + ++ ++ +H DL+ +
Sbjct: 263 FMAKGSL------LDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAA 313
Query: 653 NVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE--------------- 697
N+L+ + + DFGL R I + + + G K + + PE
Sbjct: 314 NILVSASLVCKIADFGLARVIED---NEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWS 370
Query: 698 YGILLLEIFT-GKRPTSDM 715
+GILL+EI T G+ P M
Sbjct: 371 FGILLMEIVTYGRIPYPGM 389
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 55/113 (48%), Gaps = 8/113 (7%)
Query: 565 FMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSL-ESCPR-ILSFLRR 622
+ E LR + H +++K C QG LV E++ GSL + PR + +
Sbjct: 63 WKQEIDILRTLYHEHIIKYKGCCED---QGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQL 119
Query: 623 LNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPE 675
L A + + YLH + +H +L NVLLDND +GDFGL + +PE
Sbjct: 120 LLFAQQICEGMAYLH---SQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPE 169
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 87/215 (40%), Gaps = 46/215 (21%)
Query: 549 IAVKVLF---LHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFR--ALVYE 603
+A+KVLF L + G E + ++RH N++++ YF VY
Sbjct: 41 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY----------GYFHDATRVYL 90
Query: 604 FMHHGSLESCPRILSFL------RRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD 657
+ + L + R L L R ++A+AL Y H K ++H D+KP N+LL
Sbjct: 91 ILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLG 147
Query: 658 NDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPEY---------------GILL 702
+ + DFG + P ++ C GT+ Y PE G+L
Sbjct: 148 SAGELKIADFGWSVHAPSSRRTDLC------GTLDYLPPEMIEGRMHDEKVDLWSLGVLC 201
Query: 703 LEIFTGKRP-TSDMFTEGLDLHNFVKMALPDQILQ 736
E GK P ++ + E + V+ PD + +
Sbjct: 202 YEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 236
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 87/215 (40%), Gaps = 46/215 (21%)
Query: 549 IAVKVLF---LHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFR--ALVYE 603
+A+KVLF L + G E + ++RH N++++ YF VY
Sbjct: 37 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY----------GYFHDATRVYL 86
Query: 604 FMHHGSLESCPRILSFL------RRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD 657
+ + L + R L L R ++A+AL Y H K ++H D+KP N+LL
Sbjct: 87 ILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLG 143
Query: 658 NDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPEY---------------GILL 702
+ + DFG + P ++ C GT+ Y PE G+L
Sbjct: 144 SAGELKIADFGWSVHAPSSRRTDLC------GTLDYLPPEMIEGRMHDEKVDLWSLGVLC 197
Query: 703 LEIFTGKRP-TSDMFTEGLDLHNFVKMALPDQILQ 736
E GK P ++ + E + V+ PD + +
Sbjct: 198 YEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 232
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 87/223 (39%), Gaps = 46/223 (20%)
Query: 537 VYKGILDLDQTFIAVKVLF---LHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQ 593
VY + +A+KVLF L + G E + ++RH N++++
Sbjct: 41 VYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY--------- 91
Query: 594 GNYFR--ALVYEFMHHGSLESCPRILSFL------RRLNIAIDVASALEYLHHHCKKPIV 645
YF VY + + L + R L L R ++A+AL Y H K ++
Sbjct: 92 -GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVI 147
Query: 646 HCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPEY------- 698
H D+KP N+LL + + DFG + P + C GT+ Y PE
Sbjct: 148 HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC------GTLDYLPPEMIEGRMHD 201
Query: 699 --------GILLLEIFTGKRP-TSDMFTEGLDLHNFVKMALPD 732
G+L E GK P ++ + E + V+ PD
Sbjct: 202 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD 244
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 55/113 (48%), Gaps = 8/113 (7%)
Query: 565 FMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSL-ESCPR-ILSFLRR 622
+ E LR + H +++K C QG LV E++ GSL + PR + +
Sbjct: 63 WKQEIDILRTLYHEHIIKYKGCCED---QGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQL 119
Query: 623 LNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPE 675
L A + + YLH + +H +L NVLLDND +GDFGL + +PE
Sbjct: 120 LLFAQQICEGMAYLH---AQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPE 169
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 49/194 (25%)
Query: 547 TFIAVKVLFLHQRGAL--KSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEF 604
T +AVK L + G + ++F+ E ++ ++H LV++ + + ++ EF
Sbjct: 37 TKVAVKTL---KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPI-----YIITEF 88
Query: 605 MHHGSLESCPRILSFLRR-----------LNIAIDVASALEYLHHHCKKPIVHCDLKPSN 653
M GSL L FL+ ++ + +A + Y+ +K +H DL+ +N
Sbjct: 89 MAKGSL------LDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE---RKNYIHRDLRAAN 139
Query: 654 VLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------Y 698
VL+ + + DFGL R I + + + G K + + PE +
Sbjct: 140 VLVSESLMCKIADFGLARVIED---NEYTAREGAKFPIKWTAPEAINFGCFTIKSNVWSF 196
Query: 699 GILLLEIFT-GKRP 711
GILL EI T GK P
Sbjct: 197 GILLYEIVTYGKIP 210
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 87/215 (40%), Gaps = 46/215 (21%)
Query: 549 IAVKVLF---LHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFR--ALVYE 603
+A+KVLF L + G E + ++RH N++++ YF VY
Sbjct: 36 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY----------GYFHDATRVYL 85
Query: 604 FMHHGSLESCPRILSFL------RRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD 657
+ + L + R L L R ++A+AL Y H K ++H D+KP N+LL
Sbjct: 86 ILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLG 142
Query: 658 NDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPEY---------------GILL 702
+ + DFG + P ++ C GT+ Y PE G+L
Sbjct: 143 SAGELKIADFGWSVHAPSSRRTDLC------GTLDYLPPEMIEGRMHDEKVDLWSLGVLC 196
Query: 703 LEIFTGKRP-TSDMFTEGLDLHNFVKMALPDQILQ 736
E GK P ++ + E + V+ PD + +
Sbjct: 197 YEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 231
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 83/197 (42%), Gaps = 40/197 (20%)
Query: 549 IAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDF---------QGNYF 597
+AVK++ Q +L+ E + + + H N+VK+ T G F
Sbjct: 42 VAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVF 101
Query: 598 RALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD 657
LV HG + F + + SA++Y H +K IVH DLK N+LLD
Sbjct: 102 DYLV----AHGRXKEKEARAKFRQ-------IVSAVQYCH---QKFIVHRDLKAENLLLD 147
Query: 658 NDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPEYGILLLEIFTGKR---PTSD 714
D + DFG F E N+ + G YA P E+F GK+ P D
Sbjct: 148 ADXNIKIADFG---FSNEFTFGNKLDA--FCGAPPYAAP-------ELFQGKKYDGPEVD 195
Query: 715 MFTEGLDLHNFVKMALP 731
+++ G+ L+ V +LP
Sbjct: 196 VWSLGVILYTLVSGSLP 212
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 87/215 (40%), Gaps = 46/215 (21%)
Query: 549 IAVKVLF---LHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFR--ALVYE 603
+A+KVLF L + G E + ++RH N++++ YF VY
Sbjct: 36 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY----------GYFHDATRVYL 85
Query: 604 FMHHGSLESCPRILSFL------RRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD 657
+ + L + R L L R ++A+AL Y H K ++H D+KP N+LL
Sbjct: 86 ILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLG 142
Query: 658 NDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPEY---------------GILL 702
+ + DFG + P ++ C GT+ Y PE G+L
Sbjct: 143 SAGELKIADFGWSVHAPSSRRTDLC------GTLDYLPPEMIEGRMHDEKVDLWSLGVLC 196
Query: 703 LEIFTGKRP-TSDMFTEGLDLHNFVKMALPDQILQ 736
E GK P ++ + E + V+ PD + +
Sbjct: 197 YEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 231
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 89/227 (39%), Gaps = 46/227 (20%)
Query: 537 VYKGILDLDQTFIAVKVLF---LHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQ 593
VY + +A+KVLF L + G E + ++RH N++++
Sbjct: 29 VYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY--------- 79
Query: 594 GNYFR--ALVYEFMHHGSLESCPRILSFL------RRLNIAIDVASALEYLHHHCKKPIV 645
YF VY + + L + R L L R ++A+AL Y H K ++
Sbjct: 80 -GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVI 135
Query: 646 HCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPEY------- 698
H D+KP N+LL + + DFG + P + C GT+ Y PE
Sbjct: 136 HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLC------GTLDYLPPEXIEGRXHD 189
Query: 699 --------GILLLEIFTGKRP-TSDMFTEGLDLHNFVKMALPDQILQ 736
G+L E GK P ++ + E + V+ PD + +
Sbjct: 190 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 236
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 89/227 (39%), Gaps = 46/227 (20%)
Query: 537 VYKGILDLDQTFIAVKVLF---LHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQ 593
VY + +A+KVLF L + G E + ++RH N++++
Sbjct: 24 VYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY--------- 74
Query: 594 GNYFR--ALVYEFMHHGSLESCPRILSFL------RRLNIAIDVASALEYLHHHCKKPIV 645
YF VY + + L + R L L R ++A+AL Y H K ++
Sbjct: 75 -GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVI 130
Query: 646 HCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPEY------- 698
H D+KP N+LL + + DFG + P + C GT+ Y PE
Sbjct: 131 HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTELC------GTLDYLPPEMIEGRMHD 184
Query: 699 --------GILLLEIFTGKRP-TSDMFTEGLDLHNFVKMALPDQILQ 736
G+L E GK P ++ + E + V+ PD + +
Sbjct: 185 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 231
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 86/202 (42%), Gaps = 38/202 (18%)
Query: 535 ATVYKGILDLDQTFIAVKVLFLH--QRGALKSFMAECQALRNIR---HRNLVKIITACST 589
TVYK F+A+K + + + G S + E LR + H N+V+++ C+T
Sbjct: 18 GTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRLMDVCAT 77
Query: 590 SDFQGNYFRALVYEFMHHG---SLESCP-------RILSFLRRLNIAIDVASALEYLHHH 639
S LV+E + L+ P I +R+ L++LH +
Sbjct: 78 SRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF------LRGLDFLHAN 131
Query: 640 CKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSN--------QCSSVGLKGTV 691
C IVH DLKP N+L+ + T + DFGL R M+ + + V L+ T
Sbjct: 132 C---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVVTLWYRAPEVLLQST- 187
Query: 692 GYATP----EYGILLLEIFTGK 709
YATP G + E+F K
Sbjct: 188 -YATPVDMWSVGCIFAEMFRRK 208
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 86/215 (40%), Gaps = 46/215 (21%)
Query: 549 IAVKVLF---LHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFR--ALVYE 603
+A+KVLF L + G E + ++RH N++++ YF VY
Sbjct: 36 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY----------GYFHDATRVYL 85
Query: 604 FMHHGSLESCPRILSFL------RRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD 657
+ + L + R L L R ++A+AL Y H K ++H D+KP N+LL
Sbjct: 86 ILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLG 142
Query: 658 NDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPEY---------------GILL 702
+ + DFG + P + C GT+ Y PE G+L
Sbjct: 143 SAGELKIADFGWSVHAPSSRRTTLC------GTLDYLPPEMIEGRMHDEKVDLWSLGVLC 196
Query: 703 LEIFTGKRP-TSDMFTEGLDLHNFVKMALPDQILQ 736
E GK P ++ + E + V+ PD + +
Sbjct: 197 YEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 231
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 78/178 (43%), Gaps = 29/178 (16%)
Query: 535 ATVYKGILDLDQTFIAVKVLFLH--QRGALKSFMAECQALRNIR---HRNLVKIITACST 589
TVYK F+A+K + + + G S + E LR + H N+V+++ C+T
Sbjct: 18 GTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRLMDVCAT 77
Query: 590 SDFQGNYFRALVYEFMHHG---SLESCP-------RILSFLRRLNIAIDVASALEYLHHH 639
S LV+E + L+ P I +R+ L++LH +
Sbjct: 78 SRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF------LRGLDFLHAN 131
Query: 640 CKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE 697
C IVH DLKP N+L+ + T + DFGL R + S Q + + T+ Y PE
Sbjct: 132 C---IVHRDLKPENILVTSGGTVKLADFGLAR-----IYSYQMALAPVVVTLWYRAPE 181
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 101/221 (45%), Gaps = 43/221 (19%)
Query: 526 NVSYESLVKA----TVYKGILDL---DQTFIAVKVLFL-HQRGALKSFMAECQALRNIRH 577
N+S + +V A V G L L + +A+K L + + + F+ E + H
Sbjct: 34 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 93
Query: 578 RNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESCPRI----LSFLRRLNIAIDVASAL 633
N++++ + S +V E+M +GSL+S R + ++ + + +AS +
Sbjct: 94 PNIIRLEGVVTKSKPV-----MIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 148
Query: 634 EYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI---PEVMSSNQCSSVGLKGT 690
+YL VH DL N+L+++++ + DFGL+R + PE + + G K
Sbjct: 149 KYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTR----GGKIP 201
Query: 691 VGYATPE---------------YGILLLEIFT-GKRPTSDM 715
+ + +PE YGI+L E+ + G+RP +M
Sbjct: 202 IRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM 242
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 86/215 (40%), Gaps = 46/215 (21%)
Query: 549 IAVKVLF---LHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFR--ALVYE 603
+A+KVLF L + G E + ++RH N++++ YF VY
Sbjct: 39 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY----------GYFHDATRVYL 88
Query: 604 FMHHGSLESCPRILSFL------RRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD 657
+ + L + R L L R ++A+AL Y H K ++H D+KP N+LL
Sbjct: 89 ILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLG 145
Query: 658 NDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPEY---------------GILL 702
+ + DFG + P + C GT+ Y PE G+L
Sbjct: 146 SAGELKIADFGWSVHAPSSRRTTLC------GTLDYLPPEMIEGRMHDEKVDLWSLGVLC 199
Query: 703 LEIFTGKRP-TSDMFTEGLDLHNFVKMALPDQILQ 736
E GK P ++ + E + V+ PD + +
Sbjct: 200 YEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 234
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 99/217 (45%), Gaps = 35/217 (16%)
Query: 526 NVSYESLVKA----TVYKGILDL---DQTFIAVKVLFL-HQRGALKSFMAECQALRNIRH 577
N+S + +V A V G L L + +A+K L + + + F+ E + H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 578 RNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESCPRI----LSFLRRLNIAIDVASAL 633
N++++ + S +V E+M +GSL+S R + ++ + + +AS +
Sbjct: 106 PNIIRLEGVVTKSKPV-----MIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 634 EYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI---PEVMSSNQCSSVGLKGT 690
+YL VH DL N+L+++++ + DFGL+R + PE + + + ++ T
Sbjct: 161 KYLSDMG---FVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 691 VGYATP-----------EYGILLLEIFT-GKRPTSDM 715
A YGI+L E+ + G+RP +M
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM 254
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 86/215 (40%), Gaps = 46/215 (21%)
Query: 549 IAVKVLF---LHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFR--ALVYE 603
+A+KVLF L + G E + ++RH N++++ YF VY
Sbjct: 41 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY----------GYFHDATRVYL 90
Query: 604 FMHHGSLESCPRILSFL------RRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD 657
+ + L + R L L R ++A+AL Y H K ++H D+KP N+LL
Sbjct: 91 ILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLG 147
Query: 658 NDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPEY---------------GILL 702
+ + DFG + P + C GT+ Y PE G+L
Sbjct: 148 SAGELKIADFGWSVHAPSSRRTTLC------GTLDYLPPEMIEGRMHDEKVDLWSLGVLC 201
Query: 703 LEIFTGKRP-TSDMFTEGLDLHNFVKMALPDQILQ 736
E GK P ++ + E + V+ PD + +
Sbjct: 202 YEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 236
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 83/175 (47%), Gaps = 20/175 (11%)
Query: 535 ATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACST-SDFQ 593
V+K L D F+AVK+ L + + +S E + ++H NL++ I A S+ +
Sbjct: 29 GCVWKAQLMND--FVAVKIFPLQDKQSWQS-EREIFSTPGMKHENLLQFIAAEKRGSNLE 85
Query: 594 GNYFRALVYEFMHHGSLESCPR--ILSFLRRLNIAIDVASALEYLHHH---CK----KP- 643
+ L+ F GSL + I+++ ++A ++ L YLH C+ KP
Sbjct: 86 VELW--LITAFHDKGSLTDYLKGNIITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPS 143
Query: 644 IVHCDLKPSNVLLDNDMTAHMGDFGLT-RFIPEVMSSNQCSSVGLKGTVGYATPE 697
I H D K NVLL +D+TA + DFGL RF P + G GT Y PE
Sbjct: 144 IAHRDFKSKNVLLKSDLTAVLADFGLAVRFEP---GKPPGDTHGQVGTRRYMAPE 195
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 86/215 (40%), Gaps = 46/215 (21%)
Query: 549 IAVKVLF---LHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFR--ALVYE 603
+A+KVLF L + G E + ++RH N++++ YF VY
Sbjct: 39 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY----------GYFHDATRVYL 88
Query: 604 FMHHGSLESCPRILSFL------RRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD 657
+ + L + R L L R ++A+AL Y H K ++H D+KP N+LL
Sbjct: 89 ILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLG 145
Query: 658 NDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPEY---------------GILL 702
+ + DFG + P + C GT+ Y PE G+L
Sbjct: 146 SAGELKIADFGWSVHAPSSRRDDLC------GTLDYLPPEMIEGRMHDEKVDLWSLGVLC 199
Query: 703 LEIFTGKRP-TSDMFTEGLDLHNFVKMALPDQILQ 736
E GK P ++ + E + V+ PD + +
Sbjct: 200 YEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 234
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 89/191 (46%), Gaps = 36/191 (18%)
Query: 549 IAVKVLFL-HQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHH 607
+A+K L + + + F+ E + H N++++ + S +V E+M +
Sbjct: 47 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV-----MIVTEYMEN 101
Query: 608 GSLESCPRI----LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAH 663
GSL+S R + ++ + + +AS ++YL VH DL N+L+++++
Sbjct: 102 GSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCK 158
Query: 664 MGDFGLTRFI---PEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEI 705
+ DFGL+R + PE + + G K + + +PE YGI+L E+
Sbjct: 159 VSDFGLSRVLEDDPEAAYTTR----GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 214
Query: 706 FT-GKRPTSDM 715
+ G+RP +M
Sbjct: 215 MSYGERPYWEM 225
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 86/215 (40%), Gaps = 46/215 (21%)
Query: 549 IAVKVLF---LHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFR--ALVYE 603
+A+KVLF L + G E + ++RH N++++ YF VY
Sbjct: 35 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY----------GYFHDATRVYL 84
Query: 604 FMHHGSLESCPRILSFL------RRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD 657
+ + L + R L L R ++A+AL Y H K ++H D+KP N+LL
Sbjct: 85 ILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLG 141
Query: 658 NDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPEY---------------GILL 702
+ + DFG + P + C GT+ Y PE G+L
Sbjct: 142 SAGELKIADFGWSVHAPSSRRTTLC------GTLDYLPPEMIEGRMHDEKVDLWSLGVLC 195
Query: 703 LEIFTGKRP-TSDMFTEGLDLHNFVKMALPDQILQ 736
E GK P ++ + E + V+ PD + +
Sbjct: 196 YEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 230
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 86/215 (40%), Gaps = 46/215 (21%)
Query: 549 IAVKVLF---LHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFR--ALVYE 603
+A+KVLF L + G E + ++RH N++++ YF VY
Sbjct: 40 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY----------GYFHDATRVYL 89
Query: 604 FMHHGSLESCPRILSFL------RRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD 657
+ + L + R L L R ++A+AL Y H K ++H D+KP N+LL
Sbjct: 90 ILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLG 146
Query: 658 NDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPEY---------------GILL 702
+ + DFG + P + C GT+ Y PE G+L
Sbjct: 147 SAGELKIADFGWSVHAPSSRRTTLC------GTLDYLPPEMIEGRMHDEKVDLWSLGVLC 200
Query: 703 LEIFTGKRP-TSDMFTEGLDLHNFVKMALPDQILQ 736
E GK P ++ + E + V+ PD + +
Sbjct: 201 YEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 235
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 78/178 (43%), Gaps = 29/178 (16%)
Query: 535 ATVYKGILDLDQTFIAVKVLFLH--QRGALKSFMAECQALRNIR---HRNLVKIITACST 589
TVYK F+A+K + + + G S + E LR + H N+V+++ C+T
Sbjct: 18 GTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRLMDVCAT 77
Query: 590 SDFQGNYFRALVYEFMHHG---SLESCP-------RILSFLRRLNIAIDVASALEYLHHH 639
S LV+E + L+ P I +R+ L++LH +
Sbjct: 78 SRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF------LRGLDFLHAN 131
Query: 640 CKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE 697
C IVH DLKP N+L+ + T + DFGL R + S Q + + T+ Y PE
Sbjct: 132 C---IVHRDLKPENILVTSGGTVKLADFGLAR-----IYSYQMALFPVVVTLWYRAPE 181
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 51/104 (49%), Gaps = 16/104 (15%)
Query: 629 VASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPE-------VMSSNQ 681
+ A+EY H H IVH DLKP N+LLD+++ + DFGL+ + + S N
Sbjct: 117 IICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNY 173
Query: 682 CSSVGLKGTVGYATPEY-----GILLLEIFTGKRPTSDMFTEGL 720
+ + G + YA PE GI+L + G+ P D F L
Sbjct: 174 AAPEVINGKL-YAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL 216
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 99/217 (45%), Gaps = 35/217 (16%)
Query: 526 NVSYESLVKA----TVYKGILDL---DQTFIAVKVLFL-HQRGALKSFMAECQALRNIRH 577
N+S + +V A V G L L + +A+K L + + + F+ E + H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 578 RNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESCPRI----LSFLRRLNIAIDVASAL 633
N++++ + S +V E+M +GSL+S R + ++ + + +AS +
Sbjct: 106 PNIIRLEGVVTKSKPV-----MIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 634 EYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI---PEVMSSNQCSSVGLKGT 690
+YL VH DL N+L+++++ + DFGL+R + PE + + + ++ T
Sbjct: 161 KYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 691 VGYATP-----------EYGILLLEIFT-GKRPTSDM 715
A YGI+L E+ + G+RP +M
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM 254
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 87/187 (46%), Gaps = 28/187 (14%)
Query: 549 IAVKVLFL-HQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHH 607
+A+K L + + + F+ E + H N++++ + S +V E+M +
Sbjct: 74 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV-----MIVTEYMEN 128
Query: 608 GSLESCPRI----LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAH 663
GSL+S R + ++ + + +AS ++YL VH DL N+L+++++
Sbjct: 129 GSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCK 185
Query: 664 MGDFGLTRFI---PEVMSSNQCSSVGLKGTVGYATP-----------EYGILLLEIFT-G 708
+ DFGL+R + PE + + + ++ T A YGI+L E+ + G
Sbjct: 186 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG 245
Query: 709 KRPTSDM 715
+RP +M
Sbjct: 246 ERPYWEM 252
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 87/187 (46%), Gaps = 28/187 (14%)
Query: 549 IAVKVLFL-HQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHH 607
+A+K L + + + F+ E + H N++++ + S +V E+M +
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV-----MIVTEYMEN 130
Query: 608 GSLESCPRI----LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAH 663
GSL+S R + ++ + + +AS ++YL VH DL N+L+++++
Sbjct: 131 GSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCK 187
Query: 664 MGDFGLTRFI---PEVMSSNQCSSVGLKGTVGYATP-----------EYGILLLEIFT-G 708
+ DFGL+R + PE + + + ++ T A YGI+L E+ + G
Sbjct: 188 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG 247
Query: 709 KRPTSDM 715
+RP +M
Sbjct: 248 ERPYWEM 254
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 87/187 (46%), Gaps = 28/187 (14%)
Query: 549 IAVKVLFL-HQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHH 607
+A+K L + + + F+ E + H N++++ + S +V E+M +
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV-----MIVTEYMEN 130
Query: 608 GSLESCPRI----LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAH 663
GSL+S R + ++ + + +AS ++YL VH DL N+L+++++
Sbjct: 131 GSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCK 187
Query: 664 MGDFGLTRFI---PEVMSSNQCSSVGLKGTVGYATP-----------EYGILLLEIFT-G 708
+ DFGL+R + PE + + + ++ T A YGI+L E+ + G
Sbjct: 188 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG 247
Query: 709 KRPTSDM 715
+RP +M
Sbjct: 248 ERPYWEM 254
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 86/215 (40%), Gaps = 46/215 (21%)
Query: 549 IAVKVLF---LHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFR--ALVYE 603
+A+KVLF L + G E + ++RH N++++ YF VY
Sbjct: 39 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY----------GYFHDATRVYL 88
Query: 604 FMHHGSLESCPRILSFL------RRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD 657
+ + L + R L L R ++A+AL Y H K ++H D+KP N+LL
Sbjct: 89 ILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLG 145
Query: 658 NDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPEY---------------GILL 702
+ + DFG + P + C GT+ Y PE G+L
Sbjct: 146 SAGELKIADFGWSVHAPSSRRTTLC------GTLDYLPPEMIEGRMHDEKVDLWSLGVLC 199
Query: 703 LEIFTGKRP-TSDMFTEGLDLHNFVKMALPDQILQ 736
E GK P ++ + E + V+ PD + +
Sbjct: 200 YEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 234
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 79/172 (45%), Gaps = 31/172 (18%)
Query: 568 ECQALRNIRHRNLVKIITACSTSD-------FQGNYFRALVYEFMHHGSLESCPRILSFL 620
E LR +RH +++K+ + D + GN +++++ S F
Sbjct: 63 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNE----LFDYIVQRDKMSEQEARRFF 118
Query: 621 RRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV-MSS 679
++ + SA+EY H H IVH DLKP N+LLD + + DFGL+ + +
Sbjct: 119 QQ------IISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLK 169
Query: 680 NQCSSVGLKGTVGYATPEYGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALP 731
C G+ YA PE ++ +++ G P D+++ G+ L+ + LP
Sbjct: 170 TSC------GSPNYAAPE--VISGKLYAG--PEVDVWSCGVILYVMLCRRLP 211
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 89/227 (39%), Gaps = 46/227 (20%)
Query: 537 VYKGILDLDQTFIAVKVLF---LHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQ 593
VY + +A+KVLF L + G E + ++RH N++++
Sbjct: 27 VYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY--------- 77
Query: 594 GNYFR--ALVYEFMHHGSLESCPRILSFL------RRLNIAIDVASALEYLHHHCKKPIV 645
YF VY + + L + R L L R ++A+AL Y H K ++
Sbjct: 78 -GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVI 133
Query: 646 HCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPEY------- 698
H D+KP N+LL + + DFG + P + C GT+ Y PE
Sbjct: 134 HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC------GTLDYLPPEMIEGRMHD 187
Query: 699 --------GILLLEIFTGKRP-TSDMFTEGLDLHNFVKMALPDQILQ 736
G+L E GK P ++ + E + V+ PD + +
Sbjct: 188 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 234
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 87/187 (46%), Gaps = 28/187 (14%)
Query: 549 IAVKVLFL-HQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHH 607
+A+K L + + + F+ E + H N++++ + S +V E+M +
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV-----MIVTEYMEN 130
Query: 608 GSLESCPRI----LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAH 663
GSL+S R + ++ + + +AS ++YL VH DL N+L+++++
Sbjct: 131 GSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCK 187
Query: 664 MGDFGLTRFI---PEVMSSNQCSSVGLKGTVGYATP-----------EYGILLLEIFT-G 708
+ DFGL+R + PE + + + ++ T A YGI+L E+ + G
Sbjct: 188 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYG 247
Query: 709 KRPTSDM 715
+RP +M
Sbjct: 248 ERPYWEM 254
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 86/215 (40%), Gaps = 46/215 (21%)
Query: 549 IAVKVLF---LHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFR--ALVYE 603
+A+KVLF L + G E + ++RH N++++ YF VY
Sbjct: 33 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY----------GYFHDATRVYL 82
Query: 604 FMHHGSLESCPRILSFL------RRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD 657
+ + L + R L L R ++A+AL Y H K ++H D+KP N+LL
Sbjct: 83 ILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLG 139
Query: 658 NDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPEY---------------GILL 702
+ + DFG + P + C GT+ Y PE G+L
Sbjct: 140 SAGELKIADFGWSVHAPSSRRTTLC------GTLDYLPPEMIEGRMHDEKVDLWSLGVLC 193
Query: 703 LEIFTGKRP-TSDMFTEGLDLHNFVKMALPDQILQ 736
E GK P ++ + E + V+ PD + +
Sbjct: 194 YEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 228
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 79/172 (45%), Gaps = 31/172 (18%)
Query: 568 ECQALRNIRHRNLVKIITACSTSD-------FQGNYFRALVYEFMHHGSLESCPRILSFL 620
E LR +RH +++K+ + D + GN +++++ S F
Sbjct: 64 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNE----LFDYIVQRDKMSEQEARRFF 119
Query: 621 RRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV-MSS 679
++ + SA+EY H H IVH DLKP N+LLD + + DFGL+ + +
Sbjct: 120 QQ------IISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLK 170
Query: 680 NQCSSVGLKGTVGYATPEYGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALP 731
C G+ YA PE ++ +++ G P D+++ G+ L+ + LP
Sbjct: 171 TSC------GSPNYAAPE--VISGKLYAG--PEVDVWSCGVILYVMLCRRLP 212
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 79/171 (46%), Gaps = 29/171 (16%)
Query: 568 ECQALRNIRHRNLVKIITACSTSD-------FQGNYFRALVYEFMHHGSLESCPRILSFL 620
E LR +RH +++K+ + D + GN +++++ S F
Sbjct: 54 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNE----LFDYIVQRDKMSEQEARRFF 109
Query: 621 RRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSN 680
++ + SA+EY H H IVH DLKP N+LLD + + DFGL+ +M+
Sbjct: 110 QQ------IISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLS----NIMTDG 156
Query: 681 QCSSVGLKGTVGYATPEYGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALP 731
G+ YA PE ++ +++ G P D+++ G+ L+ + LP
Sbjct: 157 NFLKTSC-GSPNYAAPE--VISGKLYAG--PEVDVWSCGVILYVMLCRRLP 202
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 86/215 (40%), Gaps = 46/215 (21%)
Query: 549 IAVKVLF---LHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFR--ALVYE 603
+A+KVLF L + G E + ++RH N++++ YF VY
Sbjct: 36 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY----------GYFHDATRVYL 85
Query: 604 FMHHGSLESCPRILSFL------RRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD 657
+ + L + R L L R ++A+AL Y H K ++H D+KP N+LL
Sbjct: 86 ILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLG 142
Query: 658 NDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPEY---------------GILL 702
+ + DFG + P + C GT+ Y PE G+L
Sbjct: 143 SAGELKIADFGWSVHAPSSRRTXLC------GTLDYLPPEMIEGRMHDEKVDLWSLGVLC 196
Query: 703 LEIFTGKRP-TSDMFTEGLDLHNFVKMALPDQILQ 736
E GK P ++ + E + V+ PD + +
Sbjct: 197 YEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 231
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 79/171 (46%), Gaps = 29/171 (16%)
Query: 568 ECQALRNIRHRNLVKIITACSTSD-------FQGNYFRALVYEFMHHGSLESCPRILSFL 620
E LR +RH +++K+ + D + GN +++++ S F
Sbjct: 58 EISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYAGNE----LFDYIVQRDKMSEQEARRFF 113
Query: 621 RRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSN 680
++ + SA+EY H H IVH DLKP N+LLD + + DFGL+ +M+
Sbjct: 114 QQ------IISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLS----NIMTDG 160
Query: 681 QCSSVGLKGTVGYATPEYGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALP 731
G+ YA PE ++ +++ G P D+++ G+ L+ + LP
Sbjct: 161 NFLKTSC-GSPNYAAPE--VISGKLYAG--PEVDVWSCGVILYVMLCRRLP 206
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 85/215 (39%), Gaps = 46/215 (21%)
Query: 549 IAVKVLF---LHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFR--ALVYE 603
+A+KVLF L + G E + ++RH N++++ YF VY
Sbjct: 37 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY----------GYFHDATRVYL 86
Query: 604 FMHHGSLESCPRILSFL------RRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD 657
+ + L + R L L R ++A+AL Y H K ++H D+KP N+LL
Sbjct: 87 ILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLG 143
Query: 658 NDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPEY---------------GILL 702
+ + DFG + P C GT+ Y PE G+L
Sbjct: 144 SAGELKIADFGWSVHAPSSRRDTLC------GTLDYLPPEMIEGRMHDEKVDLWSLGVLC 197
Query: 703 LEIFTGKRP-TSDMFTEGLDLHNFVKMALPDQILQ 736
E GK P ++ + E + V+ PD + +
Sbjct: 198 YEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 232
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 66/167 (39%), Gaps = 39/167 (23%)
Query: 568 ECQALRNIRHRNLVKIITACSTSD--------FQGNYFRALVYEFMHHGSLESCPRILSF 619
E Q L + R +V + A T D G + +Y G E+
Sbjct: 234 EKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEA------- 286
Query: 620 LRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSS 679
R + A ++ LE LH ++ IV+ DLKP N+LLD+ + D GL +PE +
Sbjct: 287 -RAVFYAAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTI 342
Query: 680 NQCSSVGLKGTVGYATPEY---------------GILLLEIFTGKRP 711
G GTVGY PE G LL E+ G+ P
Sbjct: 343 K-----GRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 98/217 (45%), Gaps = 35/217 (16%)
Query: 526 NVSYESLVKA----TVYKGILDL---DQTFIAVKVLFL-HQRGALKSFMAECQALRNIRH 577
N+S + +V A V G L L + +A+K L + + + F+ E + H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 578 RNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESCPRI----LSFLRRLNIAIDVASAL 633
N++++ + S +V E+M +GSL+S R + ++ + + +AS +
Sbjct: 106 PNIIRLEGVVTKSKPV-----MIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 634 EYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI---PEVMSSNQCSSVGLKGT 690
+YL VH DL N+L+++++ + DFGL R + PE + + + ++ T
Sbjct: 161 KYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWT 217
Query: 691 VGYATP-----------EYGILLLEIFT-GKRPTSDM 715
A YGI+L E+ + G+RP +M
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM 254
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 69/162 (42%), Gaps = 23/162 (14%)
Query: 563 KSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHH---GSLESCPRILSF 619
K M E + L+ +RH NLV ++ C + ++ LV+EF+ H LE P L +
Sbjct: 69 KIAMREIKLLKQLRHENLVNLLEVCKK---KKRWY--LVFEFVDHTILDDLELFPNGLDY 123
Query: 620 LRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTR-------- 671
+ + + + H H I+H D+KP N+L+ + DFG R
Sbjct: 124 QVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEV 180
Query: 672 FIPEVMSSNQCSSVGLKGTVGYATP----EYGILLLEIFTGK 709
+ EV + + L G V Y G L+ E+F G+
Sbjct: 181 YDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGE 222
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 86/215 (40%), Gaps = 46/215 (21%)
Query: 549 IAVKVLF---LHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFR--ALVYE 603
+A+KVLF L + G E + ++RH N++++ YF VY
Sbjct: 36 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY----------GYFHDATRVYL 85
Query: 604 FMHHGSLESCPRILSFL------RRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD 657
+ + L + R L L R ++A+AL Y H K ++H D+KP N+LL
Sbjct: 86 ILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLG 142
Query: 658 NDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPEY---------------GILL 702
+ + DFG + P + C GT+ Y PE G+L
Sbjct: 143 SAGELKIADFGWSVHAPSSRRAALC------GTLDYLPPEMIEGRMHDEKVDLWSLGVLC 196
Query: 703 LEIFTGKRP-TSDMFTEGLDLHNFVKMALPDQILQ 736
E GK P ++ + E + V+ PD + +
Sbjct: 197 YEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 231
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 85/194 (43%), Gaps = 49/194 (25%)
Query: 547 TFIAVKVLFLHQRGAL--KSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEF 604
T +AVK L + G + ++F+ E ++ ++H LV++ + + ++ E+
Sbjct: 38 TKVAVKTL---KPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTREEPI-----YIITEY 89
Query: 605 MHHGSLESCPRILSFLRR-----------LNIAIDVASALEYLHHHCKKPIVHCDLKPSN 653
M GSL L FL+ ++ + +A + Y+ +K +H DL+ +N
Sbjct: 90 MAKGSL------LDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE---RKNYIHRDLRAAN 140
Query: 654 VLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------Y 698
VL+ + + DFGL R I + + + G K + + PE +
Sbjct: 141 VLVSESLMCKIADFGLARVIED---NEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWSF 197
Query: 699 GILLLEIFT-GKRP 711
GILL EI T GK P
Sbjct: 198 GILLYEIVTYGKIP 211
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 89/215 (41%), Gaps = 46/215 (21%)
Query: 549 IAVKVLF---LHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFR--ALVYE 603
+A+KVLF L + G E + ++RH N++++ YF VY
Sbjct: 37 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY----------GYFHDATRVYL 86
Query: 604 FMHHGSLESCPRILSFL------RRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD 657
+ + L + R L L R ++A+AL Y H K ++H D+KP N+LL
Sbjct: 87 ILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLG 143
Query: 658 NDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPEY---------------GILL 702
+ + DFG + P SS + + L GT+ Y PE G+L
Sbjct: 144 SAGELKIADFGWSCHAP---SSRRTT---LSGTLDYLPPEMIEGRMHDEKVDLWSLGVLC 197
Query: 703 LEIFTGKRP-TSDMFTEGLDLHNFVKMALPDQILQ 736
E GK P ++ + E + V+ PD + +
Sbjct: 198 YEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 232
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 66/167 (39%), Gaps = 39/167 (23%)
Query: 568 ECQALRNIRHRNLVKIITACSTSD--------FQGNYFRALVYEFMHHGSLESCPRILSF 619
E Q L + R +V + A T D G + +Y G E+
Sbjct: 234 EKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEA------- 286
Query: 620 LRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSS 679
R + A ++ LE LH ++ IV+ DLKP N+LLD+ + D GL +PE +
Sbjct: 287 -RAVFYAAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTI 342
Query: 680 NQCSSVGLKGTVGYATPEY---------------GILLLEIFTGKRP 711
G GTVGY PE G LL E+ G+ P
Sbjct: 343 K-----GRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 85/210 (40%), Gaps = 36/210 (17%)
Query: 549 IAVKVLF---LHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFM 605
+A+KVLF L + G E + ++RH N++++ F L+ E+
Sbjct: 41 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY-----FHDATRVYLILEYA 95
Query: 606 HHGSLESCPRILSFL---RRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTA 662
G + + LS R ++A+AL Y H K ++H D+KP N+LL +
Sbjct: 96 PRGEVYKELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGEL 152
Query: 663 HMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPEY---------------GILLLEIFT 707
+ DFG + P + C GT+ Y PE G+L E
Sbjct: 153 KIADFGWSVHAPSSRRTTLC------GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV 206
Query: 708 GKRP-TSDMFTEGLDLHNFVKMALPDQILQ 736
GK P ++ + E + V+ PD + +
Sbjct: 207 GKPPFEANTYQETYKRISRVEFTFPDFVTE 236
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 88/227 (38%), Gaps = 46/227 (20%)
Query: 537 VYKGILDLDQTFIAVKVLF---LHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQ 593
VY + +A+KVLF L + G E + ++RH N++++
Sbjct: 26 VYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY--------- 76
Query: 594 GNYFR--ALVYEFMHHGSLESCPRILSFL------RRLNIAIDVASALEYLHHHCKKPIV 645
YF VY + + L + R L L R ++A+AL Y H K ++
Sbjct: 77 -GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVI 132
Query: 646 HCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPEY------- 698
H D+KP N+LL + + DFG + P C GT+ Y PE
Sbjct: 133 HRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC------GTLDYLPPEMIEGRMHD 186
Query: 699 --------GILLLEIFTGKRP-TSDMFTEGLDLHNFVKMALPDQILQ 736
G+L E GK P ++ + E + V+ PD + +
Sbjct: 187 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 233
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 98/217 (45%), Gaps = 35/217 (16%)
Query: 526 NVSYESLVKA----TVYKGILDL---DQTFIAVKVLFL-HQRGALKSFMAECQALRNIRH 577
N+S + +V A V G L L + +A+K L + + + F+ E + H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 578 RNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESCPRI----LSFLRRLNIAIDVASAL 633
N++++ + S +V E+M +GSL+S R + ++ + + +AS +
Sbjct: 106 PNIIRLEGVVTKSKPV-----MIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 634 EYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI---PEVMSSNQCSSVGLKGT 690
+YL VH DL N+L+++++ + DFGL R + PE + + + ++ T
Sbjct: 161 KYLSDMG---YVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 691 VGYATP-----------EYGILLLEIFT-GKRPTSDM 715
A YGI+L E+ + G+RP +M
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM 254
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 90/202 (44%), Gaps = 37/202 (18%)
Query: 546 QTFIAVKVLFLHQRGALKS---FMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602
+T +AVK + ++ +L+ F+ E ++ ++V+++ S +V
Sbjct: 44 ETRVAVKTV--NESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPT-----LVVM 96
Query: 603 EFMHHGSLESCPRIL-------------SFLRRLNIAIDVASALEYLHHHCKKPIVHCDL 649
E M HG L+S R L + + +A ++A + YL+ K VH DL
Sbjct: 97 ELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDL 153
Query: 650 KPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKG--TVGYATPEYGILLLEIFT 707
N ++ +D T +GDFG+TR I E + G KG V + PE L +FT
Sbjct: 154 AARNCMVAHDFTVKIGDFGMTRDIXETDXXRK----GGKGLLPVRWMAPES--LKDGVFT 207
Query: 708 GKRPTSDMFTEGLDLHNFVKMA 729
+SDM++ G+ L +A
Sbjct: 208 ---TSSDMWSFGVVLWEITSLA 226
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 90/202 (44%), Gaps = 37/202 (18%)
Query: 546 QTFIAVKVLFLHQRGALKS---FMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602
+T +AVK + ++ +L+ F+ E ++ ++V+++ S +V
Sbjct: 47 ETRVAVKTV--NESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPT-----LVVM 99
Query: 603 EFMHHGSLESCPRIL-------------SFLRRLNIAIDVASALEYLHHHCKKPIVHCDL 649
E M HG L+S R L + + +A ++A + YL+ K VH DL
Sbjct: 100 ELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDL 156
Query: 650 KPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKG--TVGYATPEYGILLLEIFT 707
N ++ +D T +GDFG+TR I E + G KG V + PE L +FT
Sbjct: 157 AARNCMVAHDFTVKIGDFGMTRDIXETDXXRK----GGKGLLPVRWMAPES--LKDGVFT 210
Query: 708 GKRPTSDMFTEGLDLHNFVKMA 729
+SDM++ G+ L +A
Sbjct: 211 ---TSSDMWSFGVVLWEITSLA 229
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 85/215 (39%), Gaps = 46/215 (21%)
Query: 549 IAVKVLF---LHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFR--ALVYE 603
+A+KVLF L + G E + ++RH N++++ YF VY
Sbjct: 36 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY----------GYFHDATRVYL 85
Query: 604 FMHHGSLESCPRILSFL------RRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD 657
+ + L + R L L R ++A+AL Y H K ++H D+KP N+LL
Sbjct: 86 ILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLG 142
Query: 658 NDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPEY---------------GILL 702
+ + DFG + P C GT+ Y PE G+L
Sbjct: 143 SAGELKIADFGWSVHAPSSRRXXLC------GTLDYLPPEMIEGRMHDEKVDLWSLGVLC 196
Query: 703 LEIFTGKRP-TSDMFTEGLDLHNFVKMALPDQILQ 736
E GK P ++ + E + V+ PD + +
Sbjct: 197 YEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 231
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 85/215 (39%), Gaps = 46/215 (21%)
Query: 549 IAVKVLF---LHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFR--ALVYE 603
+A+KVLF L + G E + ++RH N++++ YF VY
Sbjct: 39 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY----------GYFHDATRVYL 88
Query: 604 FMHHGSLESCPRILSFL------RRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD 657
+ + L + R L L R ++A+AL Y H K ++H D+KP N+LL
Sbjct: 89 ILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLG 145
Query: 658 NDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPEY---------------GILL 702
+ + DFG + P C GT+ Y PE G+L
Sbjct: 146 SAGELKIADFGWSVHAPSSRRXXLC------GTLDYLPPEMIEGRMHDEKVDLWSLGVLC 199
Query: 703 LEIFTGKRP-TSDMFTEGLDLHNFVKMALPDQILQ 736
E GK P ++ + E + V+ PD + +
Sbjct: 200 YEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 234
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 90/202 (44%), Gaps = 37/202 (18%)
Query: 546 QTFIAVKVLFLHQRGALKS---FMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602
+T +AVK + ++ +L+ F+ E ++ ++V+++ S +V
Sbjct: 47 ETRVAVKTV--NESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPT-----LVVM 99
Query: 603 EFMHHGSLESCPRIL-------------SFLRRLNIAIDVASALEYLHHHCKKPIVHCDL 649
E M HG L+S R L + + +A ++A + YL+ K VH DL
Sbjct: 100 ELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDL 156
Query: 650 KPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKG--TVGYATPEYGILLLEIFT 707
N ++ +D T +GDFG+TR I E + G KG V + PE L +FT
Sbjct: 157 AARNCMVAHDFTVKIGDFGMTRDIXETDXXRK----GGKGLLPVRWMAPES--LKDGVFT 210
Query: 708 GKRPTSDMFTEGLDLHNFVKMA 729
+SDM++ G+ L +A
Sbjct: 211 ---TSSDMWSFGVVLWEITSLA 229
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 85/213 (39%), Gaps = 42/213 (19%)
Query: 549 IAVKVLF---LHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFM 605
+A+KVLF L + G E + ++RH N++++ S VY +
Sbjct: 36 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDS--------TRVYLIL 87
Query: 606 HHGSLESCPRILSFL------RRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDND 659
+ L + R L L R ++A+AL Y H K ++H D+KP N+LL +
Sbjct: 88 EYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKKVIHRDIKPENLLLGSA 144
Query: 660 MTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPEY---------------GILLLE 704
+ DFG + P + C GT+ Y PE G+L E
Sbjct: 145 GELKIADFGWSVHAPSSRRAALC------GTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 198
Query: 705 IFTGKRP-TSDMFTEGLDLHNFVKMALPDQILQ 736
GK P ++ + + + V+ PD + +
Sbjct: 199 FLVGKPPFEANTYQDTYKRISRVEFTFPDFVTE 231
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 86/215 (40%), Gaps = 46/215 (21%)
Query: 549 IAVKVLF---LHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFR--ALVYE 603
+A+KVLF L + G E + ++RH N++++ YF VY
Sbjct: 40 LALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLY----------GYFHDATRVYL 89
Query: 604 FMHHGSLESCPRILSFLRRLN------IAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD 657
+ + L + R L L R + ++A+AL Y H K ++H D+KP N+LL
Sbjct: 90 ILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLG 146
Query: 658 NDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPEY---------------GILL 702
++ + DFG + P + C GT+ Y PE G+L
Sbjct: 147 SNGELKIADFGWSVHAPSSRRTTLC------GTLDYLPPEMIEGRMHDEKVDLWSLGVLC 200
Query: 703 LEIFTGKRP-TSDMFTEGLDLHNFVKMALPDQILQ 736
E G P + + E + V+ PD + +
Sbjct: 201 YEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVTE 235
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 89/227 (39%), Gaps = 46/227 (20%)
Query: 537 VYKGILDLDQTFIAVKVLF---LHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQ 593
VY + +A+KVLF L + G E + ++RH N++++
Sbjct: 26 VYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY--------- 76
Query: 594 GNYFR--ALVYEFMHHGSLESCPRILSFL------RRLNIAIDVASALEYLHHHCKKPIV 645
YF VY + + L + R L L R ++A+AL Y H K ++
Sbjct: 77 -GYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVI 132
Query: 646 HCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPEY------- 698
H D+KP N+LL + + +FG + P + C GT+ Y PE
Sbjct: 133 HRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLC------GTLDYLPPEMIEGRMHD 186
Query: 699 --------GILLLEIFTGKRP-TSDMFTEGLDLHNFVKMALPDQILQ 736
G+L E GK P ++ + E + V+ PD + +
Sbjct: 187 EKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 233
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 98/217 (45%), Gaps = 35/217 (16%)
Query: 526 NVSYESLVKA----TVYKGILDL---DQTFIAVKVLFL-HQRGALKSFMAECQALRNIRH 577
N+S + +V A V G L L + +A+K L + + + F+ E + H
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDH 105
Query: 578 RNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESCPRI----LSFLRRLNIAIDVASAL 633
N++++ + S +V E M +GSL+S R + ++ + + +AS +
Sbjct: 106 PNIIRLEGVVTKSKPV-----MIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 160
Query: 634 EYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI---PEVMSSNQCSSVGLKGT 690
+YL VH DL N+L+++++ + DFGL+R + PE + + + ++ T
Sbjct: 161 KYLSDMGA---VHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 691 VGYATP-----------EYGILLLEIFT-GKRPTSDM 715
A YGI+L E+ + G+RP +M
Sbjct: 218 SPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEM 254
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 85/198 (42%), Gaps = 60/198 (30%)
Query: 547 TFIAVKVLFLHQRGAL--KSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEF 604
T +AVK + + G++ ++F+AE ++ ++H LVK+ + ++ EF
Sbjct: 207 TKVAVKTM---KPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIY------IITEF 257
Query: 605 MHHGSLESCPRILSFLRR-----------LNIAIDVASALEYLHHHCKKPIVHCDLKPSN 653
M GSL L FL+ ++ + +A + ++ ++ +H DL+ +N
Sbjct: 258 MAKGSL------LDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAAN 308
Query: 654 VLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------Y 698
+L+ + + DFGL R VG K + + PE +
Sbjct: 309 ILVSASLVCKIADFGLAR-------------VGAKFPIKWTAPEAINFGSFTIKSDVWSF 355
Query: 699 GILLLEIFT-GKRPTSDM 715
GILL+EI T G+ P M
Sbjct: 356 GILLMEIVTYGRIPYPGM 373
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 54/111 (48%), Gaps = 12/111 (10%)
Query: 621 RRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSN 680
R + + S LE+LH ++ I++ DLKP NVLLD+D + D GL + +
Sbjct: 290 RAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAV----ELKAG 342
Query: 681 QCSSVGLKGTVGYATPEYGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALP 731
Q + G GT G+ PE +LL E + + D F G+ L+ + P
Sbjct: 343 QTKTKGYAGTPGFMAPE--LLLGEEYDF---SVDYFALGVTLYEMIAARGP 388
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 54/111 (48%), Gaps = 12/111 (10%)
Query: 621 RRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSN 680
R + + S LE+LH ++ I++ DLKP NVLLD+D + D GL + +
Sbjct: 290 RAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAV----ELKAG 342
Query: 681 QCSSVGLKGTVGYATPEYGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALP 731
Q + G GT G+ PE +LL E + + D F G+ L+ + P
Sbjct: 343 QTKTKGYAGTPGFMAPE--LLLGEEYDF---SVDYFALGVTLYEMIAARGP 388
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 88/191 (46%), Gaps = 36/191 (18%)
Query: 549 IAVKVLFL-HQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHH 607
+A+K L + + + F+ E + H N++++ + S +V E M +
Sbjct: 47 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV-----MIVTEXMEN 101
Query: 608 GSLESCPRI----LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAH 663
GSL+S R + ++ + + +AS ++YL VH DL N+L+++++
Sbjct: 102 GSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCK 158
Query: 664 MGDFGLTRFI---PEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEI 705
+ DFGL+R + PE + + G K + + +PE YGI+L E+
Sbjct: 159 VSDFGLSRVLEDDPEAAYTTR----GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 214
Query: 706 FT-GKRPTSDM 715
+ G+RP +M
Sbjct: 215 MSYGERPYWEM 225
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 54/111 (48%), Gaps = 12/111 (10%)
Query: 621 RRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSN 680
R + + S LE+LH ++ I++ DLKP NVLLD+D + D GL + +
Sbjct: 290 RAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAV----ELKAG 342
Query: 681 QCSSVGLKGTVGYATPEYGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALP 731
Q + G GT G+ PE +LL E + + D F G+ L+ + P
Sbjct: 343 QTKTKGYAGTPGFMAPE--LLLGEEYDF---SVDYFALGVTLYEMIAARGP 388
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 54/111 (48%), Gaps = 12/111 (10%)
Query: 621 RRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSN 680
R + + S LE+LH ++ I++ DLKP NVLLD+D + D GL + +
Sbjct: 290 RAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAV----ELKAG 342
Query: 681 QCSSVGLKGTVGYATPEYGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALP 731
Q + G GT G+ PE +LL E + + D F G+ L+ + P
Sbjct: 343 QTKTKGYAGTPGFMAPE--LLLGEEYDF---SVDYFALGVTLYEMIAARGP 388
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 85/215 (39%), Gaps = 46/215 (21%)
Query: 549 IAVKVLF---LHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFR--ALVYE 603
+A+KVLF L + G E + ++RH N++++ YF VY
Sbjct: 40 LALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLY----------GYFHDATRVYL 89
Query: 604 FMHHGSLESCPRILSFLRRLN------IAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD 657
+ + L + R L L R + ++A+AL Y H K ++H D+KP N+LL
Sbjct: 90 ILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLG 146
Query: 658 NDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPEY---------------GILL 702
++ + DFG + P C GT+ Y PE G+L
Sbjct: 147 SNGELKIADFGWSVHAPSSRRDTLC------GTLDYLPPEMIEGRMHDEKVDLWSLGVLC 200
Query: 703 LEIFTGKRP-TSDMFTEGLDLHNFVKMALPDQILQ 736
E G P + + E + V+ PD + +
Sbjct: 201 YEFLVGMPPFEAHTYQETYRRISRVEFTFPDFVTE 235
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 62/143 (43%), Gaps = 17/143 (11%)
Query: 545 DQTFIAVKVLFLHQ----RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNY-FRA 599
D +F+ V V L ++ F+ E ++ H ++ K++ S +G
Sbjct: 48 DGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPM 107
Query: 600 LVYEFMHHGSLES---CPRI------LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLK 650
++ FM HG L + RI L + +D+A +EYL + +H DL
Sbjct: 108 VILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLS---SRNFIHRDLA 164
Query: 651 PSNVLLDNDMTAHMGDFGLTRFI 673
N +L DMT + DFGL+R I
Sbjct: 165 ARNCMLAEDMTVCVADFGLSRKI 187
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 77/168 (45%), Gaps = 15/168 (8%)
Query: 568 ECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGS---LESCP-RILSFLRRL 623
E Q LR +RH+N+++++ + Q Y +V E+ G L+S P + +
Sbjct: 56 EIQLLRRLRHKNVIQLVDVLYNEEKQKMY---MVMEYCVCGMQEMLDSVPEKRFPVCQAH 112
Query: 624 NIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCS 683
+ LEYLH + IVH D+KP N+LL T + G+ + + + C
Sbjct: 113 GYFCQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCR 169
Query: 684 SVGLKGTVGYATPEYGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALP 731
+ +G+ + PE L+ F+G + D+++ G+ L+N P
Sbjct: 170 TS--QGSPAFQPPEIAN-GLDTFSGFK--VDIWSAGVTLYNITTGLYP 212
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 90/202 (44%), Gaps = 37/202 (18%)
Query: 546 QTFIAVKVLFLHQRGALKS---FMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602
+T +AVK + ++ +L+ F+ E ++ ++V+++ S +V
Sbjct: 47 ETRVAVKTV--NESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPT-----LVVM 99
Query: 603 EFMHHGSLESCPRIL-------------SFLRRLNIAIDVASALEYLHHHCKKPIVHCDL 649
E M HG L+S R L + + +A ++A + YL+ K VH DL
Sbjct: 100 ELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDL 156
Query: 650 KPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKG--TVGYATPEYGILLLEIFT 707
N ++ +D T +GDFG+TR I E + G KG V + PE L +FT
Sbjct: 157 AARNCMVAHDFTVKIGDFGMTRDIYETAYYRK----GGKGLLPVRWMAPES--LKDGVFT 210
Query: 708 GKRPTSDMFTEGLDLHNFVKMA 729
+SDM++ G+ L +A
Sbjct: 211 ---TSSDMWSFGVVLWEITSLA 229
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 86/215 (40%), Gaps = 46/215 (21%)
Query: 549 IAVKVLF---LHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFR--ALVYE 603
+A+KVLF L + G E + ++RH N++++ YF VY
Sbjct: 39 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLY----------GYFHDATRVYL 88
Query: 604 FMHHGSLESCPRILSFL------RRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD 657
+ + L + R L L R ++A+AL Y H K ++H D+KP N+LL
Sbjct: 89 ILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLG 145
Query: 658 NDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPEY---------------GILL 702
+ + +FG + P + C GT+ Y PE G+L
Sbjct: 146 SAGELKIANFGWSVHAPSSRRTTLC------GTLDYLPPEMIEGRMHDEKVDLWSLGVLC 199
Query: 703 LEIFTGKRP-TSDMFTEGLDLHNFVKMALPDQILQ 736
E GK P ++ + E + V+ PD + +
Sbjct: 200 YEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTE 234
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 88/191 (46%), Gaps = 36/191 (18%)
Query: 549 IAVKVLFL-HQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHH 607
+A+K L + + + F+ E + H N++++ + S +V E M +
Sbjct: 76 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPV-----MIVTEXMEN 130
Query: 608 GSLESCPRI----LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAH 663
GSL+S R + ++ + + +AS ++YL VH DL N+L+++++
Sbjct: 131 GSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILINSNLVCK 187
Query: 664 MGDFGLTRFI---PEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEI 705
+ DFGL+R + PE + + G K + + +PE YGI+L E+
Sbjct: 188 VSDFGLSRVLEDDPEAAYTTR----GGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243
Query: 706 FT-GKRPTSDM 715
+ G+RP +M
Sbjct: 244 MSYGERPYWEM 254
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 75/173 (43%), Gaps = 22/173 (12%)
Query: 535 ATVYKGILDLDQTFIA---VKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSD 591
+ VY+ LD +A V++ L A + E L+ + H N++K A D
Sbjct: 46 SEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYY-ASFIED 104
Query: 592 FQGNYFRALVYEFMHHGSLESCPRILSFLRRL-------NIAIDVASALEYLHHHCKKPI 644
+ N +V E G L + +RL + + SALE++H + +
Sbjct: 105 NELN----IVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH---SRRV 157
Query: 645 VHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE 697
+H D+KP+NV + +GD GL RF SS ++ L GT Y +PE
Sbjct: 158 MHRDIKPANVFITATGVVKLGDLGLGRFF----SSKTTAAHSLVGTPYYMSPE 206
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 80/175 (45%), Gaps = 33/175 (18%)
Query: 563 KSFMAECQALRNIRHRNLVK---IITACSTSDFQGNYFRALVYEFMHHGSLESCPRI--- 616
+ F++E + H N++ ++T C ++ E+M +GSL++ R
Sbjct: 75 RDFLSEASIMGQFDHPNIIHLEGVVTKCKPV--------MIITEYMENGSLDAFLRKNDG 126
Query: 617 -LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI-- 673
+ ++ + + + S ++YL VH DL N+L+++++ + DFG++R +
Sbjct: 127 RFTVIQLVGMLRGIGSGMKYLSDMSA---VHRDLAARNILVNSNLVCKVSDFGMSRVLED 183
Query: 674 -PEVMSSNQCSSVGLKGTVGYATP-----------EYGILLLEIFT-GKRPTSDM 715
PE + + + ++ T A YGI++ E+ + G+RP DM
Sbjct: 184 DPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDM 238
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 80/175 (45%), Gaps = 33/175 (18%)
Query: 563 KSFMAECQALRNIRHRNLVK---IITACSTSDFQGNYFRALVYEFMHHGSLESCPRI--- 616
+ F++E + H N++ ++T C ++ E+M +GSL++ R
Sbjct: 60 RDFLSEASIMGQFDHPNIIHLEGVVTKCKPV--------MIITEYMENGSLDAFLRKNDG 111
Query: 617 -LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI-- 673
+ ++ + + + S ++YL VH DL N+L+++++ + DFG++R +
Sbjct: 112 RFTVIQLVGMLRGIGSGMKYLSDM---SYVHRDLAARNILVNSNLVCKVSDFGMSRVLED 168
Query: 674 -PEVMSSNQCSSVGLKGTVGYATP-----------EYGILLLEIFT-GKRPTSDM 715
PE + + + ++ T A YGI++ E+ + G+RP DM
Sbjct: 169 DPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDM 223
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 80/175 (45%), Gaps = 33/175 (18%)
Query: 563 KSFMAECQALRNIRHRNLVK---IITACSTSDFQGNYFRALVYEFMHHGSLESCPRI--- 616
+ F++E + H N++ ++T C ++ E+M +GSL++ R
Sbjct: 54 RDFLSEASIMGQFDHPNIIHLEGVVTKCKPV--------MIITEYMENGSLDAFLRKNDG 105
Query: 617 -LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI-- 673
+ ++ + + + S ++YL VH DL N+L+++++ + DFG++R +
Sbjct: 106 RFTVIQLVGMLRGIGSGMKYLSDM---SYVHRDLAARNILVNSNLVCKVSDFGMSRVLED 162
Query: 674 -PEVMSSNQCSSVGLKGTVGYATP-----------EYGILLLEIFT-GKRPTSDM 715
PE + + + ++ T A YGI++ E+ + G+RP DM
Sbjct: 163 DPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDM 217
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 88/195 (45%), Gaps = 44/195 (22%)
Query: 549 IAVKVLFL-HQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRA----LVYE 603
+A+K L + + + F+ E + H N+V + +G R +V E
Sbjct: 74 VAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHL---------EGVVTRGKPVMIVIE 124
Query: 604 FMHHGSLESCPRI----LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDND 659
FM +G+L++ R + ++ + + +A+ + YL VH DL N+L++++
Sbjct: 125 FMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYL---ADMGYVHRDLAARNILVNSN 181
Query: 660 MTAHMGDFGLTRFI---PEVMSSNQCSSVGLKGTVGYATPE---------------YGIL 701
+ + DFGL+R I PE + ++ G K V + PE YGI+
Sbjct: 182 LVCKVSDFGLSRVIEDDPEAVY----TTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIV 237
Query: 702 LLEIFT-GKRPTSDM 715
+ E+ + G+RP DM
Sbjct: 238 MWEVMSYGERPYWDM 252
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 70/149 (46%), Gaps = 20/149 (13%)
Query: 535 ATVYKGIL--DLDQTFIAVKVLFLHQRGALKS---FMAECQALRNIRHRNLVKIITACST 589
TVYKGI + + I V + L++ K+ FM E + ++ H +LV+++ C +
Sbjct: 52 GTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLS 111
Query: 590 SDFQGNYFRALVYEFMHHGSL-----ESCPRILSFLRRLNIAIDVASALEYLHHHCKKPI 644
Q LV + M HG L E I S L LN + +A + YL ++ +
Sbjct: 112 PTIQ------LVTQLMPHGCLLEYVHEHKDNIGSQLL-LNWCVQIAKGMMYLE---ERRL 161
Query: 645 VHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673
VH DL NVL+ + + DFGL R +
Sbjct: 162 VHRDLAARNVLVKSPNHVKITDFGLARLL 190
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 86/211 (40%), Gaps = 43/211 (20%)
Query: 537 VYKGIL---DLDQTFIAVKVL-FLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
VY G L D + AVK L + G + F+ E +++ H N++ ++ C S
Sbjct: 45 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS-- 102
Query: 593 QGNYFRALVYEFMHHGSLESCPRILSFLRR----------LNIAIDVASALEYLHHHCKK 642
+G+ L Y M HG L + F+R + + VA ++YL K
Sbjct: 103 EGSPLVVLPY--MKHGDLRN------FIRNETHNPTVKDLIGFGLQVAKGMKYL---ASK 151
Query: 643 PIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE----- 697
VH DL N +LD T + DFGL R + + + + G K V + E
Sbjct: 152 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQTQ 211
Query: 698 ----------YGILLLEIFT-GKRPTSDMFT 717
+G+LL E+ T G P D+ T
Sbjct: 212 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 242
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 69/146 (47%), Gaps = 18/146 (12%)
Query: 535 ATVYKGILDLDQTFIAVKVLFLHQR-----GALKSFMAECQALRNIRHRNLVKIITACST 589
ATVYK +A+K + L R G ++ + E + L+ + H N++ ++ A
Sbjct: 24 ATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDA--- 80
Query: 590 SDFQGNYFRALVYEFMHHGSLESCPR----ILSFLRRLNIAIDVASALEYLHHHCKKPIV 645
F +LV++FM LE + +L+ + LEYLH H I+
Sbjct: 81 --FGHKSNISLVFDFME-TDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHW---IL 134
Query: 646 HCDLKPSNVLLDNDMTAHMGDFGLTR 671
H DLKP+N+LLD + + DFGL +
Sbjct: 135 HRDLKPNNLLLDENGVLKLADFGLAK 160
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 63/142 (44%), Gaps = 24/142 (16%)
Query: 566 MAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHG---SLESCP-------R 615
+A + L H N+V+++ C+TS LV+E + L+ P
Sbjct: 62 VALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAET 121
Query: 616 ILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPE 675
I +R+ L++LH +C IVH DLKP N+L+ + T + DFGL R
Sbjct: 122 IKDLMRQF------LRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR---- 168
Query: 676 VMSSNQCSSVGLKGTVGYATPE 697
+ S Q + + T+ Y PE
Sbjct: 169 -IYSYQMALTPVVVTLWYRAPE 189
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 90/202 (44%), Gaps = 37/202 (18%)
Query: 546 QTFIAVKVLFLHQRGALKS---FMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602
+T +AVK + ++ +L+ F+ E ++ ++V+++ S +V
Sbjct: 47 ETRVAVKTV--NESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPT-----LVVM 99
Query: 603 EFMHHGSLESCPRIL-------------SFLRRLNIAIDVASALEYLHHHCKKPIVHCDL 649
E M HG L+S R L + + +A ++A + YL+ K VH DL
Sbjct: 100 ELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDL 156
Query: 650 KPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKG--TVGYATPEYGILLLEIFT 707
N ++ +D T +GDFG+TR I E + G KG V + PE L +FT
Sbjct: 157 AARNCMVAHDFTVKIGDFGMTRDIYETDYYRK----GGKGLLPVRWMAPES--LKDGVFT 210
Query: 708 GKRPTSDMFTEGLDLHNFVKMA 729
+SDM++ G+ L +A
Sbjct: 211 ---TSSDMWSFGVVLWEITSLA 229
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 90/202 (44%), Gaps = 37/202 (18%)
Query: 546 QTFIAVKVLFLHQRGALKS---FMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602
+T +AVK + ++ +L+ F+ E ++ ++V+++ S +V
Sbjct: 46 ETRVAVKTV--NESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPT-----LVVM 98
Query: 603 EFMHHGSLESCPRIL-------------SFLRRLNIAIDVASALEYLHHHCKKPIVHCDL 649
E M HG L+S R L + + +A ++A + YL+ K VH DL
Sbjct: 99 ELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRDL 155
Query: 650 KPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKG--TVGYATPEYGILLLEIFT 707
N ++ +D T +GDFG+TR I E + G KG V + PE L +FT
Sbjct: 156 AARNCMVAHDFTVKIGDFGMTRDIYETDYYRK----GGKGLLPVRWMAPES--LKDGVFT 209
Query: 708 GKRPTSDMFTEGLDLHNFVKMA 729
+SDM++ G+ L +A
Sbjct: 210 ---TSSDMWSFGVVLWEITSLA 228
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 85/206 (41%), Gaps = 36/206 (17%)
Query: 549 IAVKVLF---LHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFM 605
+A+KVLF L + G E + ++RH N++++ F L+ E+
Sbjct: 41 LALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGY-----FHDATRVYLILEYA 95
Query: 606 HHGSLESCPRILSFL---RRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTA 662
G + + LS R ++A+AL Y H K ++H D+KP N+LL +
Sbjct: 96 PRGEVYKELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGEL 152
Query: 663 HMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPEY---------------GILLLEIFT 707
+ DFG + P SS + L GT+ Y PE G+L E
Sbjct: 153 KIADFGWSVHAP---SSRRXX---LXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLV 206
Query: 708 GKRP-TSDMFTEGLDLHNFVKMALPD 732
GK P ++ + E + V+ PD
Sbjct: 207 GKPPFEANTYQETYKRISRVEFTFPD 232
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 86/211 (40%), Gaps = 43/211 (20%)
Query: 537 VYKGIL---DLDQTFIAVKVL-FLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
VY G L D + AVK L + G + F+ E +++ H N++ ++ C S
Sbjct: 46 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS-- 103
Query: 593 QGNYFRALVYEFMHHGSLESCPRILSFLRR----------LNIAIDVASALEYLHHHCKK 642
+G+ L Y M HG L + F+R + + VA ++YL K
Sbjct: 104 EGSPLVVLPY--MKHGDLRN------FIRNETHNPTVKDLIGFGLQVAKGMKYL---ASK 152
Query: 643 PIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE----- 697
VH DL N +LD T + DFGL R + + + + G K V + E
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 212
Query: 698 ----------YGILLLEIFT-GKRPTSDMFT 717
+G+LL E+ T G P D+ T
Sbjct: 213 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 243
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 86/211 (40%), Gaps = 43/211 (20%)
Query: 537 VYKGIL---DLDQTFIAVKVL-FLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
VY G L D + AVK L + G + F+ E +++ H N++ ++ C S
Sbjct: 64 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS-- 121
Query: 593 QGNYFRALVYEFMHHGSLESCPRILSFLRR----------LNIAIDVASALEYLHHHCKK 642
+G+ L Y M HG L + F+R + + VA ++YL K
Sbjct: 122 EGSPLVVLPY--MKHGDLRN------FIRNETHNPTVKDLIGFGLQVAKGMKYL---ASK 170
Query: 643 PIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE----- 697
VH DL N +LD T + DFGL R + + + + G K V + E
Sbjct: 171 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 230
Query: 698 ----------YGILLLEIFT-GKRPTSDMFT 717
+G+LL E+ T G P D+ T
Sbjct: 231 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 261
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 86/211 (40%), Gaps = 43/211 (20%)
Query: 537 VYKGIL---DLDQTFIAVKVL-FLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
VY G L D + AVK L + G + F+ E +++ H N++ ++ C S
Sbjct: 65 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS-- 122
Query: 593 QGNYFRALVYEFMHHGSLESCPRILSFLRR----------LNIAIDVASALEYLHHHCKK 642
+G+ L Y M HG L + F+R + + VA ++YL K
Sbjct: 123 EGSPLVVLPY--MKHGDLRN------FIRNETHNPTVKDLIGFGLQVAKGMKYL---ASK 171
Query: 643 PIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE----- 697
VH DL N +LD T + DFGL R + + + + G K V + E
Sbjct: 172 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 231
Query: 698 ----------YGILLLEIFT-GKRPTSDMFT 717
+G+LL E+ T G P D+ T
Sbjct: 232 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 262
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 73/159 (45%), Gaps = 13/159 (8%)
Query: 548 FIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHH 607
++AVK+ + + + ++ E +L ++H N+++ I A + L+ F
Sbjct: 49 YVAVKIFPIQDKQSWQNEY-EVYSLPGMKHENILQFIGA-EKRGTSVDVDLWLITAFHEK 106
Query: 608 GSLESCPR--ILSFLRRLNIAIDVASALEYLHHHC-------KKPIVHCDLKPSNVLLDN 658
GSL + ++S+ +IA +A L YLH K I H D+K NVLL N
Sbjct: 107 GSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKN 166
Query: 659 DMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE 697
++TA + DFGL S+ + G GT Y PE
Sbjct: 167 NLTACIADFGLALKFEAGKSAG--DTHGQVGTRRYMAPE 203
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 86/213 (40%), Gaps = 43/213 (20%)
Query: 535 ATVYKGIL---DLDQTFIAVKVL-FLHQRGALKSFMAECQALRNIRHRNLVKIITACSTS 590
VY G L D + AVK L + G + F+ E +++ H N++ ++ C S
Sbjct: 42 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 101
Query: 591 DFQGNYFRALVYEFMHHGSLESCPRILSFLRR----------LNIAIDVASALEYLHHHC 640
+G+ L Y M HG L + F+R + + VA ++YL
Sbjct: 102 --EGSPLVVLPY--MKHGDLRN------FIRNETHNPTVKDLIGFGLQVAKGMKYL---A 148
Query: 641 KKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE--- 697
K VH DL N +LD T + DFGL R + + + + G K V + E
Sbjct: 149 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 208
Query: 698 ------------YGILLLEIFT-GKRPTSDMFT 717
+G+LL E+ T G P D+ T
Sbjct: 209 TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 241
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 86/211 (40%), Gaps = 43/211 (20%)
Query: 537 VYKGIL---DLDQTFIAVKVL-FLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
VY G L D + AVK L + G + F+ E +++ H N++ ++ C S
Sbjct: 38 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS-- 95
Query: 593 QGNYFRALVYEFMHHGSLESCPRILSFLRR----------LNIAIDVASALEYLHHHCKK 642
+G+ L Y M HG L + F+R + + VA ++YL K
Sbjct: 96 EGSPLVVLPY--MKHGDLRN------FIRNETHNPTVKDLIGFGLQVAKGMKYL---ASK 144
Query: 643 PIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE----- 697
VH DL N +LD T + DFGL R + + + + G K V + E
Sbjct: 145 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 204
Query: 698 ----------YGILLLEIFT-GKRPTSDMFT 717
+G+LL E+ T G P D+ T
Sbjct: 205 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 235
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 86/211 (40%), Gaps = 43/211 (20%)
Query: 537 VYKGIL---DLDQTFIAVKVL-FLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
VY G L D + AVK L + G + F+ E +++ H N++ ++ C S
Sbjct: 45 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS-- 102
Query: 593 QGNYFRALVYEFMHHGSLESCPRILSFLRR----------LNIAIDVASALEYLHHHCKK 642
+G+ L Y M HG L + F+R + + VA ++YL K
Sbjct: 103 EGSPLVVLPY--MKHGDLRN------FIRNETHNPTVKDLIGFGLQVAKGMKYL---ASK 151
Query: 643 PIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE----- 697
VH DL N +LD T + DFGL R + + + + G K V + E
Sbjct: 152 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 211
Query: 698 ----------YGILLLEIFT-GKRPTSDMFT 717
+G+LL E+ T G P D+ T
Sbjct: 212 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 242
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 70/149 (46%), Gaps = 20/149 (13%)
Query: 535 ATVYKGIL--DLDQTFIAVKVLFLHQRGALKS---FMAECQALRNIRHRNLVKIITACST 589
TVYKGI + + I V + L++ K+ FM E + ++ H +LV+++ C +
Sbjct: 29 GTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLS 88
Query: 590 SDFQGNYFRALVYEFMHHGSL-----ESCPRILSFLRRLNIAIDVASALEYLHHHCKKPI 644
Q LV + M HG L E I S L LN + +A + YL ++ +
Sbjct: 89 PTIQ------LVTQLMPHGCLLEYVHEHKDNIGSQLL-LNWCVQIAKGMMYLE---ERRL 138
Query: 645 VHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673
VH DL NVL+ + + DFGL R +
Sbjct: 139 VHRDLAARNVLVKSPNHVKITDFGLARLL 167
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 86/211 (40%), Gaps = 43/211 (20%)
Query: 537 VYKGIL---DLDQTFIAVKVL-FLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
VY G L D + AVK L + G + F+ E +++ H N++ ++ C S
Sbjct: 46 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS-- 103
Query: 593 QGNYFRALVYEFMHHGSLESCPRILSFLRR----------LNIAIDVASALEYLHHHCKK 642
+G+ L Y M HG L + F+R + + VA ++YL K
Sbjct: 104 EGSPLVVLPY--MKHGDLRN------FIRNETHNPTVKDLIGFGLQVAKGMKYL---ASK 152
Query: 643 PIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE----- 697
VH DL N +LD T + DFGL R + + + + G K V + E
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 212
Query: 698 ----------YGILLLEIFT-GKRPTSDMFT 717
+G+LL E+ T G P D+ T
Sbjct: 213 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 243
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 87/212 (41%), Gaps = 37/212 (17%)
Query: 544 LDQTFIAVKVLFLHQRGALKSFMAECQALRNIRH-------------RNLVKIITAC--- 587
LD + A+K + H L + ++E L ++ H RN VK +TA
Sbjct: 29 LDSRYYAIKKI-RHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKK 87
Query: 588 STSDFQGNYFR-ALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVH 646
ST Q Y +Y+ +H +L L R + AL Y+H + I+H
Sbjct: 88 STLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFR-----QILEALSYIH---SQGIIH 139
Query: 647 CDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPEYGILLL--- 703
DLKP N+ +D +GDFGL + + + + S L G+ T G +
Sbjct: 140 RDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVAT 199
Query: 704 EIFTGKRPTSDMFTEGLDLHN----FVKMALP 731
E+ G + + E +D+++ F +M P
Sbjct: 200 EVLDG----TGHYNEKIDMYSLGIIFFEMIYP 227
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 86/213 (40%), Gaps = 43/213 (20%)
Query: 535 ATVYKGIL---DLDQTFIAVKVL-FLHQRGALKSFMAECQALRNIRHRNLVKIITACSTS 590
VY G L D + AVK L + G + F+ E +++ H N++ ++ C S
Sbjct: 39 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 98
Query: 591 DFQGNYFRALVYEFMHHGSLESCPRILSFLRR----------LNIAIDVASALEYLHHHC 640
+G+ L Y M HG L + F+R + + VA ++YL
Sbjct: 99 --EGSPLVVLPY--MKHGDLRN------FIRNETHNPTVKDLIGFGLQVAKGMKYL---A 145
Query: 641 KKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE--- 697
K VH DL N +LD T + DFGL R + + + + G K V + E
Sbjct: 146 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQ 205
Query: 698 ------------YGILLLEIFT-GKRPTSDMFT 717
+G+LL E+ T G P D+ T
Sbjct: 206 TQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 238
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 94/218 (43%), Gaps = 52/218 (23%)
Query: 528 SYESLVKATVYKGILDLDQTF-IAVKVLFLHQRGALK-SFMAECQALRNI-RHRNLVKII 584
++ +V+AT + G+ D +AVK+L K + M+E + + ++ +H N+V ++
Sbjct: 58 AFGKVVEATAF-GLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLL 116
Query: 585 TACSTSDFQGNYFRALVYEFMHHGSLESCPRILSFLRR----------LNIAIDVASALE 634
AC+ G ++ E+ +G L L+FLRR IA AS +
Sbjct: 117 GACTHG---GPVL--VITEYCCYGDL------LNFLRRKSRVLETDPAFAIANSTASTRD 165
Query: 635 YLHHHCK----------KPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSS 684
LH + K +H D+ NVLL N A +GDFGL R I + SN
Sbjct: 166 LLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI--MNDSNYIVK 223
Query: 685 VGLKGTVGYATPE---------------YGILLLEIFT 707
+ V + PE YGILL EIF+
Sbjct: 224 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 86/211 (40%), Gaps = 43/211 (20%)
Query: 537 VYKGIL---DLDQTFIAVKVL-FLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
VY G L D + AVK L + G + F+ E +++ H N++ ++ C S
Sbjct: 43 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS-- 100
Query: 593 QGNYFRALVYEFMHHGSLESCPRILSFLRR----------LNIAIDVASALEYLHHHCKK 642
+G+ L Y M HG L + F+R + + VA ++YL K
Sbjct: 101 EGSPLVVLPY--MKHGDLRN------FIRNETHNPTVKDLIGFGLQVAKGMKYL---ASK 149
Query: 643 PIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE----- 697
VH DL N +LD T + DFGL R + + + + G K V + E
Sbjct: 150 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQTQ 209
Query: 698 ----------YGILLLEIFT-GKRPTSDMFT 717
+G+LL E+ T G P D+ T
Sbjct: 210 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 240
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 93/210 (44%), Gaps = 48/210 (22%)
Query: 532 LVKATVYKGIL-DLDQTFIAVKVLFLHQRGALKS---FMAECQALRNIRHRNLVKIITAC 587
+V V KG++ D +T +A+K + ++ +++ F+ E ++ ++V+++
Sbjct: 25 MVYEGVAKGVVKDEPETRVAIKTV--NEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV 82
Query: 588 STSDFQGNYFRALVYEFMHHGSLESCPRIL-------------SFLRRLNIAIDVASALE 634
S QG ++ E M G L+S R L S + + +A ++A +
Sbjct: 83 S----QGQP-TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 137
Query: 635 YLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKG--TVG 692
YL+ + VH DL N ++ D T +GDFG+TR I E + G KG V
Sbjct: 138 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRK----GGKGLLPVR 190
Query: 693 YATPE---------------YGILLLEIFT 707
+ +PE +G++L EI T
Sbjct: 191 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 96/226 (42%), Gaps = 41/226 (18%)
Query: 521 KDLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHR-N 579
+D++ ++ ++KA + K L +D +K + + F E + L + H N
Sbjct: 20 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY--ASKDDHRDFAGELEVLCKLGHHPN 77
Query: 580 LVKIITACSTSDFQGNYFRALVYEFMHHGSL-------------------ESCPRILSFL 620
++ ++ AC + +G + A+ E+ HG+L S LS
Sbjct: 78 IINLLGAC---EHRGYLYLAI--EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQ 132
Query: 621 RRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTR----FIPEV 676
+ L+ A DVA ++YL +K +H DL N+L+ + A + DFGL+R ++ +
Sbjct: 133 QLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKT 189
Query: 677 MSSNQCSSVGLKG------TVGYATPEYGILLLEIFT-GKRPTSDM 715
M + ++ T YG+LL EI + G P M
Sbjct: 190 MGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM 235
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 93/210 (44%), Gaps = 48/210 (22%)
Query: 532 LVKATVYKGIL-DLDQTFIAVKVLFLHQRGALKS---FMAECQALRNIRHRNLVKIITAC 587
+V V KG++ D +T +A+K + ++ +++ F+ E ++ ++V+++
Sbjct: 34 MVYEGVAKGVVKDEPETRVAIKTV--NEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV 91
Query: 588 STSDFQGNYFRALVYEFMHHGSLESCPRIL-------------SFLRRLNIAIDVASALE 634
S QG ++ E M G L+S R L S + + +A ++A +
Sbjct: 92 S----QGQP-TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 635 YLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKG--TVG 692
YL+ + VH DL N ++ D T +GDFG+TR I E + G KG V
Sbjct: 147 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRK----GGKGLLPVR 199
Query: 693 YATPE---------------YGILLLEIFT 707
+ +PE +G++L EI T
Sbjct: 200 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 96/226 (42%), Gaps = 41/226 (18%)
Query: 521 KDLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHR-N 579
+D++ ++ ++KA + K L +D +K + + F E + L + H N
Sbjct: 30 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY--ASKDDHRDFAGELEVLCKLGHHPN 87
Query: 580 LVKIITACSTSDFQGNYFRALVYEFMHHGSL-------------------ESCPRILSFL 620
++ ++ AC + +G + A+ E+ HG+L S LS
Sbjct: 88 IINLLGAC---EHRGYLYLAI--EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQ 142
Query: 621 RRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTR----FIPEV 676
+ L+ A DVA ++YL +K +H DL N+L+ + A + DFGL+R ++ +
Sbjct: 143 QLLHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKT 199
Query: 677 MSSNQCSSVGLKG------TVGYATPEYGILLLEIFT-GKRPTSDM 715
M + ++ T YG+LL EI + G P M
Sbjct: 200 MGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM 245
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 90/200 (45%), Gaps = 34/200 (17%)
Query: 537 VYKGILDLD----QTFIAVKVLFL-HQRGALKSFMAECQALRNIRHRNLVKIITACSTSD 591
VYKG+L + +A+K L + F+ E + H N++++ S
Sbjct: 60 VYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYK 119
Query: 592 FQGNYFRALVYEFMHHGSLESCPRI----LSFLRRLNIAIDVASALEYLHHHCKKPIVHC 647
++ E+M +G+L+ R S L+ + + +A+ ++YL + VH
Sbjct: 120 PM-----MIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMN---YVHR 171
Query: 648 DLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------- 697
DL N+L+++++ + DFGL+R + + + +S G K + + PE
Sbjct: 172 DLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGG-KIPIRWTAPEAISYRKFTSA 230
Query: 698 -----YGILLLEIFT-GKRP 711
+GI++ E+ T G+RP
Sbjct: 231 SDVWSFGIVMWEVMTYGERP 250
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 91/216 (42%), Gaps = 29/216 (13%)
Query: 517 SSSRKDLL---LNVSYESLVK------ATVYKGILDLDQTFIAVKVLFL--HQRGALKSF 565
SS R++L L Y+ L K VYK D +A+K + L G +
Sbjct: 8 SSGRENLYFQGLMEKYQKLEKVGEGTYGVVYKA-KDSQGRIVALKRIRLDAEDEGIPSTA 66
Query: 566 MAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESCPRILSFLRRLNI 625
+ E L+ + H N+V +I + LV+EFM + + L+ I
Sbjct: 67 IREISLLKELHHPNIVSLIDVIHS-----ERCLTLVFEFMEKDLKKVLDENKTGLQDSQI 121
Query: 626 AIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTR--------FIPEVM 677
I + L + H + I+H DLKP N+L+++D + DFGL R + EV+
Sbjct: 122 KIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV 181
Query: 678 SSNQCSSVGLKGTVGYATP----EYGILLLEIFTGK 709
+ + L G+ Y+T G + E+ TGK
Sbjct: 182 TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 87/212 (41%), Gaps = 37/212 (17%)
Query: 544 LDQTFIAVKVLFLHQRGALKSFMAECQALRNIRH-------------RNLVKIITAC--- 587
LD + A+K + H L + ++E L ++ H RN VK +TA
Sbjct: 29 LDSRYYAIKKI-RHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKK 87
Query: 588 STSDFQGNYFR-ALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVH 646
ST Q Y +Y+ +H +L L R + AL Y+H + I+H
Sbjct: 88 STLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFR-----QILEALSYIH---SQGIIH 139
Query: 647 CDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPEYGILLL--- 703
DLKP N+ +D +GDFGL + + + + S L G+ T G +
Sbjct: 140 RDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVAT 199
Query: 704 EIFTGKRPTSDMFTEGLDLHN----FVKMALP 731
E+ G + + E +D+++ F +M P
Sbjct: 200 EVLDG----TGHYNEKIDMYSLGIIFFEMIYP 227
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 91/216 (42%), Gaps = 29/216 (13%)
Query: 517 SSSRKDLL---LNVSYESLVK------ATVYKGILDLDQTFIAVKVLFL--HQRGALKSF 565
SS R++L L Y+ L K VYK D +A+K + L G +
Sbjct: 8 SSGRENLYFQGLMEKYQKLEKVGEGTYGVVYKA-KDSQGRIVALKRIRLDAEDEGIPSTA 66
Query: 566 MAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESCPRILSFLRRLNI 625
+ E L+ + H N+V +I + LV+EFM + + L+ I
Sbjct: 67 IREISLLKELHHPNIVSLIDVIHS-----ERCLTLVFEFMEKDLKKVLDENKTGLQDSQI 121
Query: 626 AIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTR--------FIPEVM 677
I + L + H + I+H DLKP N+L+++D + DFGL R + EV+
Sbjct: 122 KIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV 181
Query: 678 SSNQCSSVGLKGTVGYATP----EYGILLLEIFTGK 709
+ + L G+ Y+T G + E+ TGK
Sbjct: 182 TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 94/217 (43%), Gaps = 54/217 (24%)
Query: 528 SYESLVKATVYKGILDLDQTF-IAVKVLFLHQRGALK-SFMAECQALRNI-RHRNLVKII 584
++ +V+AT + G+ D +AVK+L K + M+E + + ++ +H N+V ++
Sbjct: 50 AFGKVVEATAF-GLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLL 108
Query: 585 TACSTSDFQGNYFRALVYEFMHHGSLESCPRILSFLRR-------------------LNI 625
AC+ G ++ E+ +G L L+FLRR L+
Sbjct: 109 GACTHG---GPVL--VITEYCCYGDL------LNFLRRKAEADLDKEDGRPLELRDLLHF 157
Query: 626 AIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSV 685
+ VA + +L K +H D+ NVLL N A +GDFGL R I + SN
Sbjct: 158 SSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI--MNDSNYIVKG 212
Query: 686 GLKGTVGYATPE---------------YGILLLEIFT 707
+ V + PE YGILL EIF+
Sbjct: 213 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 86/211 (40%), Gaps = 43/211 (20%)
Query: 537 VYKGIL---DLDQTFIAVKVL-FLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
VY G L D + AVK L + G + F+ E +++ H N++ ++ C S
Sbjct: 105 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS-- 162
Query: 593 QGNYFRALVYEFMHHGSLESCPRILSFLRR----------LNIAIDVASALEYLHHHCKK 642
+G+ L Y M HG L + F+R + + VA +++L K
Sbjct: 163 EGSPLVVLPY--MKHGDLRN------FIRNETHNPTVKDLIGFGLQVAKGMKFL---ASK 211
Query: 643 PIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE----- 697
VH DL N +LD T + DFGL R + + + + G K V + E
Sbjct: 212 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 271
Query: 698 ----------YGILLLEIFT-GKRPTSDMFT 717
+G+LL E+ T G P D+ T
Sbjct: 272 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 302
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 58/125 (46%), Gaps = 4/125 (3%)
Query: 549 IAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHG 608
+ +K L ++F+ E + +R + H N++K I D + N+ + G
Sbjct: 38 MVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVL-YKDKRLNFITEYIKGGTLRG 96
Query: 609 SLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFG 668
++S + +R++ A D+AS + YLH I+H DL N L+ + + DFG
Sbjct: 97 IIKSMDSQYPWSQRVSFAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFG 153
Query: 669 LTRFI 673
L R +
Sbjct: 154 LARLM 158
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 94/217 (43%), Gaps = 54/217 (24%)
Query: 528 SYESLVKATVYKGILDLDQTF-IAVKVLFLHQRGALK-SFMAECQALRNI-RHRNLVKII 584
++ +V+AT + G+ D +AVK+L K + M+E + + ++ +H N+V ++
Sbjct: 58 AFGKVVEATAF-GLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLL 116
Query: 585 TACSTSDFQGNYFRALVYEFMHHGSLESCPRILSFLRR-------------------LNI 625
AC+ G ++ E+ +G L L+FLRR L+
Sbjct: 117 GACTHG---GPVL--VITEYCCYGDL------LNFLRRKAEADLDKEDGRPLELRDLLHF 165
Query: 626 AIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSV 685
+ VA + +L K +H D+ NVLL N A +GDFGL R I + SN
Sbjct: 166 SSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI--MNDSNYIVKG 220
Query: 686 GLKGTVGYATPE---------------YGILLLEIFT 707
+ V + PE YGILL EIF+
Sbjct: 221 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 86/211 (40%), Gaps = 43/211 (20%)
Query: 537 VYKGIL---DLDQTFIAVKVL-FLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
VY G L D + AVK L + G + F+ E +++ H N++ ++ C S
Sbjct: 51 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS-- 108
Query: 593 QGNYFRALVYEFMHHGSLESCPRILSFLRR----------LNIAIDVASALEYLHHHCKK 642
+G+ L Y M HG L + F+R + + VA +++L K
Sbjct: 109 EGSPLVVLPY--MKHGDLRN------FIRNETHNPTVKDLIGFGLQVAKGMKFL---ASK 157
Query: 643 PIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE----- 697
VH DL N +LD T + DFGL R + + + + G K V + E
Sbjct: 158 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 217
Query: 698 ----------YGILLLEIFT-GKRPTSDMFT 717
+G+LL E+ T G P D+ T
Sbjct: 218 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 248
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 92/224 (41%), Gaps = 48/224 (21%)
Query: 537 VYKGILDLDQTFIAVKVLFLHQRGA-------LKSFMAECQALRNIRHRNLVKIITACST 589
V+KG L D++ +A+K L L + F E + N+ H N+VK+
Sbjct: 35 VHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHN 94
Query: 590 SDFQGNYFRALVYEFMHHGSL------ESCPRILSFLRRLNIAIDVASALEYLHHHCKKP 643
+V EF+ G L ++ P + + +L + +D+A +EY+ + P
Sbjct: 95 PP-------RMVMEFVPCGDLYHRLLDKAHP--IKWSVKLRLMLDIALGIEYMQNQ-NPP 144
Query: 644 IVHCDLKPSNVLLDN-----DMTAHMGDFGLTR---------------FIPEVMSSNQCS 683
IVH DL+ N+ L + + A + DFGL++ PE + + + S
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLGNFQWMAPETIGAEEES 204
Query: 684 SVGLKGTVGYATPEYGILLLEIFTGKRPTSDMFTEGLDLHNFVK 727
T +A ++L I TG+ P + + N ++
Sbjct: 205 YTEKADTYSFA-----MILYTILTGEGPFDEYSYGKIKFINMIR 243
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 86/211 (40%), Gaps = 43/211 (20%)
Query: 537 VYKGIL---DLDQTFIAVKVL-FLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
VY G L D + AVK L + G + F+ E +++ H N++ ++ C S
Sbjct: 47 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS-- 104
Query: 593 QGNYFRALVYEFMHHGSLESCPRILSFLRR----------LNIAIDVASALEYLHHHCKK 642
+G+ L Y M HG L + F+R + + VA +++L K
Sbjct: 105 EGSPLVVLPY--MKHGDLRN------FIRNETHNPTVKDLIGFGLQVAKGMKFL---ASK 153
Query: 643 PIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE----- 697
VH DL N +LD T + DFGL R + + + + G K V + E
Sbjct: 154 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 213
Query: 698 ----------YGILLLEIFT-GKRPTSDMFT 717
+G+LL E+ T G P D+ T
Sbjct: 214 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 244
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 86/211 (40%), Gaps = 43/211 (20%)
Query: 537 VYKGIL---DLDQTFIAVKVL-FLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
VY G L D + AVK L + G + F+ E +++ H N++ ++ C S
Sbjct: 47 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS-- 104
Query: 593 QGNYFRALVYEFMHHGSLESCPRILSFLRR----------LNIAIDVASALEYLHHHCKK 642
+G+ L Y M HG L + F+R + + VA +++L K
Sbjct: 105 EGSPLVVLPY--MKHGDLRN------FIRNETHNPTVKDLIGFGLQVAKGMKFL---ASK 153
Query: 643 PIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE----- 697
VH DL N +LD T + DFGL R + + + + G K V + E
Sbjct: 154 KFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQTQ 213
Query: 698 ----------YGILLLEIFT-GKRPTSDMFT 717
+G+LL E+ T G P D+ T
Sbjct: 214 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 244
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 86/211 (40%), Gaps = 43/211 (20%)
Query: 537 VYKGIL---DLDQTFIAVKVL-FLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
VY G L D + AVK L + G + F+ E +++ H N++ ++ C S
Sbjct: 46 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS-- 103
Query: 593 QGNYFRALVYEFMHHGSLESCPRILSFLRR----------LNIAIDVASALEYLHHHCKK 642
+G+ L Y M HG L + F+R + + VA +++L K
Sbjct: 104 EGSPLVVLPY--MKHGDLRN------FIRNETHNPTVKDLIGFGLQVAKGMKFL---ASK 152
Query: 643 PIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE----- 697
VH DL N +LD T + DFGL R + + + + G K V + E
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 212
Query: 698 ----------YGILLLEIFT-GKRPTSDMFT 717
+G+LL E+ T G P D+ T
Sbjct: 213 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 243
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 90/202 (44%), Gaps = 37/202 (18%)
Query: 546 QTFIAVKVLFLHQRGALKS---FMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602
+T +AVK + ++ +L+ F+ E ++ ++V+++ S +V
Sbjct: 48 ETRVAVKTV--NESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPT-----LVVM 100
Query: 603 EFMHHGSLESCPRIL-------------SFLRRLNIAIDVASALEYLHHHCKKPIVHCDL 649
E M HG L+S R L + + +A ++A + YL+ K VH +L
Sbjct: 101 ELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRNL 157
Query: 650 KPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKG--TVGYATPEYGILLLEIFT 707
N ++ +D T +GDFG+TR I E + G KG V + PE L +FT
Sbjct: 158 AARNCMVAHDFTVKIGDFGMTRDIYETDYYRK----GGKGLLPVRWMAPES--LKDGVFT 211
Query: 708 GKRPTSDMFTEGLDLHNFVKMA 729
+SDM++ G+ L +A
Sbjct: 212 ---TSSDMWSFGVVLWEITSLA 230
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 86/211 (40%), Gaps = 43/211 (20%)
Query: 537 VYKGIL---DLDQTFIAVKVL-FLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
VY G L D + AVK L + G + F+ E +++ H N++ ++ C S
Sbjct: 46 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS-- 103
Query: 593 QGNYFRALVYEFMHHGSLESCPRILSFLRR----------LNIAIDVASALEYLHHHCKK 642
+G+ L Y M HG L + F+R + + VA +++L K
Sbjct: 104 EGSPLVVLPY--MKHGDLRN------FIRNETHNPTVKDLIGFGLQVAKGMKFL---ASK 152
Query: 643 PIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE----- 697
VH DL N +LD T + DFGL R + + + + G K V + E
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 212
Query: 698 ----------YGILLLEIFT-GKRPTSDMFT 717
+G+LL E+ T G P D+ T
Sbjct: 213 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 243
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 86/211 (40%), Gaps = 43/211 (20%)
Query: 537 VYKGIL---DLDQTFIAVKVL-FLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
VY G L D + AVK L + G + F+ E +++ H N++ ++ C S
Sbjct: 44 VYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS-- 101
Query: 593 QGNYFRALVYEFMHHGSLESCPRILSFLRR----------LNIAIDVASALEYLHHHCKK 642
+G+ L Y M HG L + F+R + + VA +++L K
Sbjct: 102 EGSPLVVLPY--MKHGDLRN------FIRNETHNPTVKDLIGFGLQVAKGMKFL---ASK 150
Query: 643 PIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE----- 697
VH DL N +LD T + DFGL R + + + + G K V + E
Sbjct: 151 KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQ 210
Query: 698 ----------YGILLLEIFT-GKRPTSDMFT 717
+G+LL E+ T G P D+ T
Sbjct: 211 KFTTKSDVWSFGVLLWELMTRGAPPYPDVNT 241
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 90/202 (44%), Gaps = 37/202 (18%)
Query: 546 QTFIAVKVLFLHQRGALKS---FMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602
+T +AVK + ++ +L+ F+ E ++ ++V+++ S +V
Sbjct: 47 ETRVAVKTV--NESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPT-----LVVM 99
Query: 603 EFMHHGSLESCPRIL-------------SFLRRLNIAIDVASALEYLHHHCKKPIVHCDL 649
E M HG L+S R L + + +A ++A + YL+ K VH +L
Sbjct: 100 ELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN---AKKFVHRNL 156
Query: 650 KPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKG--TVGYATPEYGILLLEIFT 707
N ++ +D T +GDFG+TR I E + G KG V + PE L +FT
Sbjct: 157 AARNCMVAHDFTVKIGDFGMTRDIYETDYYRK----GGKGLLPVRWMAPES--LKDGVFT 210
Query: 708 GKRPTSDMFTEGLDLHNFVKMA 729
+SDM++ G+ L +A
Sbjct: 211 ---TSSDMWSFGVVLWEITSLA 229
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 87/212 (41%), Gaps = 46/212 (21%)
Query: 547 TFIAVKVLFLHQRGALKS-FMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY--- 602
T +AVK+L +++ F E + + N+VK++ C+ F + Y
Sbjct: 78 TMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDL 137
Query: 603 -EFMH-----------HGSLESCPRI-------LSFLRRLNIAIDVASALEYLHHHCKKP 643
EF+ H L + R+ LS +L IA VA+ + YL ++
Sbjct: 138 NEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERK 194
Query: 644 IVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGT-VGYATPE----- 697
VH DL N L+ +M + DFGL+R + S++ + G + + PE
Sbjct: 195 FVHRDLATRNCLVGENMVVKIADFGLSR---NIYSADYYKADGNDAIPIRWMPPESIFYN 251
Query: 698 ----------YGILLLEIFT-GKRPTSDMFTE 718
YG++L EIF+ G +P M E
Sbjct: 252 RYTTESDVWAYGVVLWEIFSYGLQPYYGMAHE 283
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 94/234 (40%), Gaps = 53/234 (22%)
Query: 536 TVYKGILDLDQTFIAVKVLFLHQRGALKS----FMAECQALRNIRHRNLVKIITACSTSD 591
TVYKG LD + T + V L R KS F E + L+ ++H N+V+ + ++
Sbjct: 41 TVYKG-LDTETT-VEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDSWEST- 97
Query: 592 FQGNYFRALVYEFMHHGSLESCPRILSFLRRLNI---------AIDVASALEYLHHHCKK 642
+G LV E G+L++ +L+R + + L++LH
Sbjct: 98 VKGKKCIVLVTELXTSGTLKT------YLKRFKVXKIKVLRSWCRQILKGLQFLHTRTP- 150
Query: 643 PIVHCDLKPSNVLLDNDM-TAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---- 697
PI+H DLK N+ + + +GD GL + + GT + PE
Sbjct: 151 PIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAK------AVIGTPEFXAPEXYEE 204
Query: 698 ----------YGILLLEIFTGKRPTSD---------MFTEGLDLHNFVKMALPD 732
+G LE T + P S+ T G+ +F K+A+P+
Sbjct: 205 KYDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPE 258
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 77/173 (44%), Gaps = 29/173 (16%)
Query: 563 KSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESCPRI----LS 618
+ F++E + H N++++ + +V E+M +GSL++ R +
Sbjct: 95 RDFLSEASIMGQFDHPNIIRLEGVVTRGRLA-----MIVTEYMENGSLDTFLRTHDGQFT 149
Query: 619 FLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMS 678
++ + + V + + YL VH DL NVL+D+++ + DFGL+R + E
Sbjct: 150 IMQLVGMLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVL-EDDP 205
Query: 679 SNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDM 715
++ G K + + PE +G+++ E+ G+RP +M
Sbjct: 206 DAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNM 258
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 93/210 (44%), Gaps = 48/210 (22%)
Query: 532 LVKATVYKGIL-DLDQTFIAVKVLFLHQRGALKS---FMAECQALRNIRHRNLVKIITAC 587
+V V KG++ D +T +A+K + ++ +++ F+ E ++ ++V+++
Sbjct: 27 MVYEGVAKGVVKDEPETRVAIKTV--NEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV 84
Query: 588 STSDFQGNYFRALVYEFMHHGSLESCPRIL-------------SFLRRLNIAIDVASALE 634
S QG ++ E M G L+S R L S + + +A ++A +
Sbjct: 85 S----QGQP-TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 635 YLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKG--TVG 692
YL+ + VH DL N ++ D T +GDFG+TR I E + G KG V
Sbjct: 140 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK----GGKGLLPVR 192
Query: 693 YATPE---------------YGILLLEIFT 707
+ +PE +G++L EI T
Sbjct: 193 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 77/173 (44%), Gaps = 29/173 (16%)
Query: 563 KSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESCPRI----LS 618
+ F++E + H N++++ + +V E+M +GSL++ R +
Sbjct: 95 RDFLSEASIMGQFDHPNIIRLEGVVTRGRLA-----MIVTEYMENGSLDTFLRTHDGQFT 149
Query: 619 FLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMS 678
++ + + V + + YL VH DL NVL+D+++ + DFGL+R + E
Sbjct: 150 IMQLVGMLRGVGAGMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVL-EDDP 205
Query: 679 SNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDM 715
++ G K + + PE +G+++ E+ G+RP +M
Sbjct: 206 DAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNM 258
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 93/210 (44%), Gaps = 48/210 (22%)
Query: 532 LVKATVYKGIL-DLDQTFIAVKVLFLHQRGALKS---FMAECQALRNIRHRNLVKIITAC 587
+V V KG++ D +T +A+K + ++ +++ F+ E ++ ++V+++
Sbjct: 40 MVYEGVAKGVVKDEPETRVAIKTV--NEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV 97
Query: 588 STSDFQGNYFRALVYEFMHHGSLESCPRIL-------------SFLRRLNIAIDVASALE 634
S QG ++ E M G L+S R L S + + +A ++A +
Sbjct: 98 S----QGQP-TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 635 YLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKG--TVG 692
YL+ + VH DL N ++ D T +GDFG+TR I E + G KG V
Sbjct: 153 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK----GGKGLLPVR 205
Query: 693 YATPE---------------YGILLLEIFT 707
+ +PE +G++L EI T
Sbjct: 206 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 93/210 (44%), Gaps = 48/210 (22%)
Query: 532 LVKATVYKGIL-DLDQTFIAVKVLFLHQRGALKS---FMAECQALRNIRHRNLVKIITAC 587
+V V KG++ D +T +A+K + ++ +++ F+ E ++ ++V+++
Sbjct: 34 MVYEGVAKGVVKDEPETRVAIKTV--NEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV 91
Query: 588 STSDFQGNYFRALVYEFMHHGSLESCPRIL-------------SFLRRLNIAIDVASALE 634
S QG ++ E M G L+S R L S + + +A ++A +
Sbjct: 92 S----QGQP-TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 635 YLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKG--TVG 692
YL+ + VH DL N ++ D T +GDFG+TR I E + G KG V
Sbjct: 147 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK----GGKGLLPVR 199
Query: 693 YATPE---------------YGILLLEIFT 707
+ +PE +G++L EI T
Sbjct: 200 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 72/181 (39%), Gaps = 44/181 (24%)
Query: 535 ATVYKGILDLDQTFIAVKVLF---LHQRGALKSFMAECQALRNIRHRNLVKIITACSTSD 591
VY ++ +A+KVLF L + G E + ++RH N++++
Sbjct: 29 GNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMY------- 81
Query: 592 FQGNYF--RALVY-------------EFMHHGSLESCPRILSFLRRLNIAIDVASALEYL 636
NYF R +Y E HG + R +F+ L A AL Y
Sbjct: 82 ---NYFHDRKRIYLMLEFAPRGELYKELQKHGRFDE-QRSATFMEEL------ADALHYC 131
Query: 637 HHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATP 696
H ++ ++H D+KP N+L+ + DFG + P + C GT+ Y P
Sbjct: 132 H---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC------GTLDYLPP 182
Query: 697 E 697
E
Sbjct: 183 E 183
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/169 (26%), Positives = 71/169 (42%), Gaps = 31/169 (18%)
Query: 566 MAECQALRNIRHRNLVKIITACSTSDFQGNYFRA---LVYEFMHHG------------SL 610
+ E + L+ ++H N+V +I C T N +A LV++F H +L
Sbjct: 65 LREIKILQLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTL 124
Query: 611 ESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLT 670
R++ L + L Y+H + I+H D+K +NVL+ D + DFGL
Sbjct: 125 SEIKRVMQML---------LNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLA 172
Query: 671 RFIPEVMSSNQCSSVGLKGTVGYATPEYGILLLEIFTGKRPTSDMFTEG 719
R +S T+ Y PE +LL E G P D++ G
Sbjct: 173 RAFSLAKNSQPNRYXNRVVTLWYRPPE--LLLGERDYG--PPIDLWGAG 217
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 69/164 (42%), Gaps = 30/164 (18%)
Query: 566 MAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLE---SCPRILSFLRR 622
+ E + L+N RH L + A T D V E+ + G L S R+ + R
Sbjct: 58 VTESRVLQNTRHPFLTALKYAFQTHDRL-----CFVMEYANGGELFFHLSRERVFTEERA 112
Query: 623 LNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQC 682
++ SALEYLH + +V+ D+K N++LD D + DFGL + S+
Sbjct: 113 RFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK----EGISDGA 165
Query: 683 SSVGLKGTVGYATPEY---------------GILLLEIFTGKRP 711
+ GT Y PE G+++ E+ G+ P
Sbjct: 166 TMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 93/210 (44%), Gaps = 48/210 (22%)
Query: 532 LVKATVYKGIL-DLDQTFIAVKVLFLHQRGALKS---FMAECQALRNIRHRNLVKIITAC 587
+V V KG++ D +T +A+K + ++ +++ F+ E ++ ++V+++
Sbjct: 31 MVYEGVAKGVVKDEPETRVAIKTV--NEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV 88
Query: 588 STSDFQGNYFRALVYEFMHHGSLESCPRIL-------------SFLRRLNIAIDVASALE 634
S QG ++ E M G L+S R L S + + +A ++A +
Sbjct: 89 S----QGQP-TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 143
Query: 635 YLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKG--TVG 692
YL+ + VH DL N ++ D T +GDFG+TR I E + G KG V
Sbjct: 144 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK----GGKGLLPVR 196
Query: 693 YATPE---------------YGILLLEIFT 707
+ +PE +G++L EI T
Sbjct: 197 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 93/210 (44%), Gaps = 48/210 (22%)
Query: 532 LVKATVYKGIL-DLDQTFIAVKVLFLHQRGALKS---FMAECQALRNIRHRNLVKIITAC 587
+V V KG++ D +T +A+K + ++ +++ F+ E ++ ++V+++
Sbjct: 33 MVYEGVAKGVVKDEPETRVAIKTV--NEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV 90
Query: 588 STSDFQGNYFRALVYEFMHHGSLESCPRIL-------------SFLRRLNIAIDVASALE 634
S QG ++ E M G L+S R L S + + +A ++A +
Sbjct: 91 S----QGQP-TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 635 YLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKG--TVG 692
YL+ + VH DL N ++ D T +GDFG+TR I E + G KG V
Sbjct: 146 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK----GGKGLLPVR 198
Query: 693 YATPE---------------YGILLLEIFT 707
+ +PE +G++L EI T
Sbjct: 199 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 72/181 (39%), Gaps = 44/181 (24%)
Query: 535 ATVYKGILDLDQTFIAVKVLF---LHQRGALKSFMAECQALRNIRHRNLVKIITACSTSD 591
VY ++ +A+KVLF L + G E + ++RH N++++
Sbjct: 28 GNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMY------- 80
Query: 592 FQGNYF--RALVY-------------EFMHHGSLESCPRILSFLRRLNIAIDVASALEYL 636
NYF R +Y E HG + R +F+ L A AL Y
Sbjct: 81 ---NYFHDRKRIYLMLEFAPRGELYKELQKHGRFDE-QRSATFMEEL------ADALHYC 130
Query: 637 HHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATP 696
H ++ ++H D+KP N+L+ + DFG + P + C GT+ Y P
Sbjct: 131 H---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC------GTLDYLPP 181
Query: 697 E 697
E
Sbjct: 182 E 182
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 93/210 (44%), Gaps = 48/210 (22%)
Query: 532 LVKATVYKGIL-DLDQTFIAVKVLFLHQRGALKS---FMAECQALRNIRHRNLVKIITAC 587
+V V KG++ D +T +A+K + ++ +++ F+ E ++ ++V+++
Sbjct: 40 MVYEGVAKGVVKDEPETRVAIKTV--NEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV 97
Query: 588 STSDFQGNYFRALVYEFMHHGSLESCPRIL-------------SFLRRLNIAIDVASALE 634
S QG ++ E M G L+S R L S + + +A ++A +
Sbjct: 98 S----QGQP-TLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 635 YLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKG--TVG 692
YL+ + VH DL N ++ D T +GDFG+TR I E + G KG V
Sbjct: 153 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK----GGKGLLPVR 205
Query: 693 YATPE---------------YGILLLEIFT 707
+ +PE +G++L EI T
Sbjct: 206 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 69/164 (42%), Gaps = 30/164 (18%)
Query: 566 MAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLE---SCPRILSFLRR 622
+ E + L+N RH L + A T D V E+ + G L S R+ + R
Sbjct: 53 VTESRVLQNTRHPFLTALKYAFQTHDRL-----CFVMEYANGGELFFHLSRERVFTEERA 107
Query: 623 LNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQC 682
++ SALEYLH + +V+ D+K N++LD D + DFGL + S+
Sbjct: 108 RFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK----EGISDGA 160
Query: 683 SSVGLKGTVGYATPEY---------------GILLLEIFTGKRP 711
+ GT Y PE G+++ E+ G+ P
Sbjct: 161 TMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 69/164 (42%), Gaps = 30/164 (18%)
Query: 566 MAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLE---SCPRILSFLRR 622
+ E + L+N RH L + A T D V E+ + G L S R+ + R
Sbjct: 53 VTESRVLQNTRHPFLTALKYAFQTHDRL-----CFVMEYANGGELFFHLSRERVFTEERA 107
Query: 623 LNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQC 682
++ SALEYLH + +V+ D+K N++LD D + DFGL + E +S
Sbjct: 108 RFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGAT 161
Query: 683 SSVGLKGTVGYATPEY---------------GILLLEIFTGKRP 711
GT Y PE G+++ E+ G+ P
Sbjct: 162 MKT-FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 80/180 (44%), Gaps = 28/180 (15%)
Query: 550 AVKVL---FLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMH 606
A+KVL L R +++ M E L ++ H +VK+ A T +G + L+ +F+
Sbjct: 60 AMKVLKKATLKVRDRVRTKM-ERDILADVNHPFVVKLHYAFQT---EGKLY--LILDFLR 113
Query: 607 HGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGD 666
G L + ++ +A L H I++ DLKP N+LLD + + D
Sbjct: 114 GGDLFTRLSKEVMFTEEDVKFYLAELALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTD 173
Query: 667 FGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRP 711
FGL++ E + ++ + GTV Y PE YG+L+ E+ TG P
Sbjct: 174 FGLSK---EAI-DHEKKAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLP 229
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 93/210 (44%), Gaps = 48/210 (22%)
Query: 532 LVKATVYKGIL-DLDQTFIAVKVLFLHQRGALKS---FMAECQALRNIRHRNLVKIITAC 587
+V V KG++ D +T +A+K + ++ +++ F+ E ++ ++V+++
Sbjct: 30 MVYEGVAKGVVKDEPETRVAIKTV--NEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV 87
Query: 588 STSDFQGNYFRALVYEFMHHGSLESCPRIL-------------SFLRRLNIAIDVASALE 634
S QG ++ E M G L+S R L S + + +A ++A +
Sbjct: 88 S----QGQP-TLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 142
Query: 635 YLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKG--TVG 692
YL+ + VH DL N ++ D T +GDFG+TR I E + G KG V
Sbjct: 143 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK----GGKGLLPVR 195
Query: 693 YATPE---------------YGILLLEIFT 707
+ +PE +G++L EI T
Sbjct: 196 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 24/146 (16%)
Query: 565 FMAECQALRNIRHRNLVK----IITACSTSDFQGNYFRALVYEFMHHGSLESCPRILSFL 620
++E LR ++H N+V+ II +T+ + +V E+ G L S +
Sbjct: 52 LVSEVNLLRELKHPNIVRYYDRIIDRTNTTLY-------IVMEYCEGGDLASVITKGTKE 104
Query: 621 RR-------LNIAIDVASALEYLHHHCK--KPIVHCDLKPSNVLLDNDMTAHMGDFGLTR 671
R+ L + + AL+ H ++H DLKP+NV LD +GDFGL R
Sbjct: 105 RQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR 164
Query: 672 FIPEVMSSNQCSSVGLKGTVGYATPE 697
+++ + + GT Y +PE
Sbjct: 165 ----ILNHDTSFAKAFVGTPYYMSPE 186
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 69/164 (42%), Gaps = 30/164 (18%)
Query: 566 MAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLE---SCPRILSFLRR 622
+ E + L+N RH L + A T D V E+ + G L S R+ + R
Sbjct: 53 VTESRVLQNTRHPFLTALKYAFQTHDRL-----CFVMEYANGGELFFHLSRERVFTEERA 107
Query: 623 LNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQC 682
++ SALEYLH + +V+ D+K N++LD D + DFGL + E +S
Sbjct: 108 RFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGAT 161
Query: 683 SSVGLKGTVGYATPEY---------------GILLLEIFTGKRP 711
GT Y PE G+++ E+ G+ P
Sbjct: 162 MKT-FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 69/164 (42%), Gaps = 30/164 (18%)
Query: 566 MAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLE---SCPRILSFLRR 622
+ E + L+N RH L + A T D V E+ + G L S R+ + R
Sbjct: 53 VTESRVLQNTRHPFLTALKYAFQTHDRL-----CFVMEYANGGELFFHLSRERVFTEERA 107
Query: 623 LNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQC 682
++ SALEYLH + +V+ D+K N++LD D + DFGL + S+
Sbjct: 108 RFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK----EGISDGA 160
Query: 683 SSVGLKGTVGYATPEY---------------GILLLEIFTGKRP 711
+ GT Y PE G+++ E+ G+ P
Sbjct: 161 TMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 93/210 (44%), Gaps = 48/210 (22%)
Query: 532 LVKATVYKGIL-DLDQTFIAVKVLFLHQRGALKS---FMAECQALRNIRHRNLVKIITAC 587
+V V KG++ D +T +A+K + ++ +++ F+ E ++ ++V+++
Sbjct: 33 MVYEGVAKGVVKDEPETRVAIKTV--NEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV 90
Query: 588 STSDFQGNYFRALVYEFMHHGSLESCPRIL-------------SFLRRLNIAIDVASALE 634
S QG ++ E M G L+S R L S + + +A ++A +
Sbjct: 91 S----QGQP-TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 635 YLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKG--TVG 692
YL+ + VH DL N ++ D T +GDFG+TR I E + G KG V
Sbjct: 146 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK----GGKGLLPVR 198
Query: 693 YATPE---------------YGILLLEIFT 707
+ +PE +G++L EI T
Sbjct: 199 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 72/181 (39%), Gaps = 44/181 (24%)
Query: 535 ATVYKGILDLDQTFIAVKVLF---LHQRGALKSFMAECQALRNIRHRNLVKIITACSTSD 591
VY ++ +A+KVLF L + G E + ++RH N++++
Sbjct: 28 GNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMY------- 80
Query: 592 FQGNYF--RALVY-------------EFMHHGSLESCPRILSFLRRLNIAIDVASALEYL 636
NYF R +Y E HG + R +F+ L A AL Y
Sbjct: 81 ---NYFHDRKRIYLMLEFAPRGELYKELQKHGRFDE-QRSATFMEEL------ADALHYC 130
Query: 637 HHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATP 696
H ++ ++H D+KP N+L+ + DFG + P + C GT+ Y P
Sbjct: 131 H---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC------GTLDYLPP 181
Query: 697 E 697
E
Sbjct: 182 E 182
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 69/164 (42%), Gaps = 30/164 (18%)
Query: 566 MAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLE---SCPRILSFLRR 622
+ E + L+N RH L + A T D V E+ + G L S R+ + R
Sbjct: 56 VTESRVLQNTRHPFLTALKYAFQTHDRL-----CFVMEYANGGELFFHLSRERVFTEERA 110
Query: 623 LNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQC 682
++ SALEYLH + +V+ D+K N++LD D + DFGL + E +S
Sbjct: 111 RFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGAT 164
Query: 683 SSVGLKGTVGYATPEY---------------GILLLEIFTGKRP 711
GT Y PE G+++ E+ G+ P
Sbjct: 165 MKT-FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 207
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 69/164 (42%), Gaps = 30/164 (18%)
Query: 566 MAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLE---SCPRILSFLRR 622
+ E + L+N RH L + A T D V E+ + G L S R+ + R
Sbjct: 53 VTESRVLQNTRHPFLTALKYAFQTHDRL-----CFVMEYANGGELFFHLSRERVFTEERA 107
Query: 623 LNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQC 682
++ SALEYLH + +V+ D+K N++LD D + DFGL + S+
Sbjct: 108 RFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK----EGISDGA 160
Query: 683 SSVGLKGTVGYATPEY---------------GILLLEIFTGKRP 711
+ GT Y PE G+++ E+ G+ P
Sbjct: 161 TMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 103/266 (38%), Gaps = 52/266 (19%)
Query: 517 SSSRKDLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ-RGALKSFMAECQALRNI 575
S +R D L S A V + +A+K + L + + ++ + E QA+
Sbjct: 11 SINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQC 70
Query: 576 RHRNLVKIITACSTSD--------FQG----NYFRALVYEFMHHGSLESCPRILSFLRRL 623
H N+V T+ D G + + +V + H + I + LR
Sbjct: 71 HHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILR-- 128
Query: 624 NIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPE--VMSSNQ 681
+V LEYLH K +H D+K N+LL D + + DFG++ F+ ++ N+
Sbjct: 129 ----EVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNK 181
Query: 682 CSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNF 725
+ GT + PE +GI +E+ TG P H +
Sbjct: 182 VRKTFV-GTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAP----------YHKY 230
Query: 726 VKMALPDQILQVLDPLFLVGGVQEGE 751
M + LQ DP L GVQ+ E
Sbjct: 231 PPMKVLMLTLQN-DPPSLETGVQDKE 255
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 50/112 (44%), Gaps = 13/112 (11%)
Query: 562 LKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESCPR----IL 617
LK+F E A R RH N+V + AC + A++ +L S R +L
Sbjct: 73 LKAFKREVMAYRQTRHENVVLFMGACMSPPHL-----AIITSLCKGRTLYSVVRDAKIVL 127
Query: 618 SFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGL 669
+ IA ++ + YLH K I+H DLK NV DN + DFGL
Sbjct: 128 DVNKTRQIAQEIVKGMGYLH---AKGILHKDLKSKNVFYDNGKVV-ITDFGL 175
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 82/200 (41%), Gaps = 47/200 (23%)
Query: 549 IAVKVLFLHQRG---ALKSFMAECQALRNI-RHRNLVKIITACSTSD-----FQG----- 594
I V V L ++ ++ M+E + + + H N+V ++ AC+ S F+
Sbjct: 76 IQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGD 135
Query: 595 --NYFRA---------LVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKP 643
NY R+ + YE E +L+F L A VA +E+L K
Sbjct: 136 LLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEF---KS 192
Query: 644 IVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMS-SNQCSSVGLKGTVGYATPE----- 697
VH DL NVL+ + + DFGL R ++MS SN + V + PE
Sbjct: 193 CVHRDLAARNVLVTHGKVVKICDFGLAR---DIMSDSNYVVRGNARLPVKWMAPESLFEG 249
Query: 698 ----------YGILLLEIFT 707
YGILL EIF+
Sbjct: 250 IYTIKSDVWSYGILLWEIFS 269
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 93/210 (44%), Gaps = 48/210 (22%)
Query: 532 LVKATVYKGIL-DLDQTFIAVKVLFLHQRGALKS---FMAECQALRNIRHRNLVKIITAC 587
+V V KG++ D +T +A+K + ++ +++ F+ E ++ ++V+++
Sbjct: 62 MVYEGVAKGVVKDEPETRVAIKTV--NEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV 119
Query: 588 STSDFQGNYFRALVYEFMHHGSLESCPRIL-------------SFLRRLNIAIDVASALE 634
S QG ++ E M G L+S R L S + + +A ++A +
Sbjct: 120 S----QGQP-TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 174
Query: 635 YLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKG--TVG 692
YL+ + VH DL N ++ D T +GDFG+TR I E + G KG V
Sbjct: 175 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRK----GGKGLLPVR 227
Query: 693 YATPE---------------YGILLLEIFT 707
+ +PE +G++L EI T
Sbjct: 228 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 96/226 (42%), Gaps = 41/226 (18%)
Query: 521 KDLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHR-N 579
+D++ ++ ++KA + K L +D +K + + F E + L + H N
Sbjct: 27 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY--ASKDDHRDFAGELEVLCKLGHHPN 84
Query: 580 LVKIITACSTSDFQGNYFRALVYEFMHHGSL-------------------ESCPRILSFL 620
++ ++ AC + +G + A+ E+ HG+L S LS
Sbjct: 85 IINLLGAC---EHRGYLYLAI--EYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQ 139
Query: 621 RRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTR----FIPEV 676
+ L+ A DVA ++YL +K +H +L N+L+ + A + DFGL+R ++ +
Sbjct: 140 QLLHFAADVARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKT 196
Query: 677 MSSNQCSSVGLKG------TVGYATPEYGILLLEIFT-GKRPTSDM 715
M + ++ T YG+LL EI + G P M
Sbjct: 197 MGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGM 242
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 37/73 (50%), Gaps = 7/73 (9%)
Query: 623 LNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQC 682
L+I I +A A+E+LH K ++H DLKPSN+ D +GDFGL M ++
Sbjct: 167 LHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLV----TAMDQDEE 219
Query: 683 SSVGLKGTVGYAT 695
L YAT
Sbjct: 220 EQTVLTPMPAYAT 232
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 80/204 (39%), Gaps = 44/204 (21%)
Query: 537 VYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTS---DFQ 593
V+KGI + Q +A+K++ L + + +++ C +S +
Sbjct: 39 VFKGIDNRTQQVVAIKIIDLE-----------EAEDEIEDIQQEITVLSQCDSSYVTKYY 87
Query: 594 GNYFRA----LVYEFMHHGSLESCPRILSFLRRLNIAI---DVASALEYLHHHCKKPIVH 646
G+Y + ++ E++ GS R F IA ++ L+YLH K +H
Sbjct: 88 GSYLKGSKLWIIMEYLGGGSALDLLRAGPF-DEFQIATMLKEILKGLDYLHSEKK---IH 143
Query: 647 CDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPEY-------- 698
D+K +NVLL + DFG + ++ Q GT + PE
Sbjct: 144 RDIKAANVLLSEQGDVKLADFG----VAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDS 199
Query: 699 -------GILLLEIFTGKRPTSDM 715
GI +E+ G+ P SDM
Sbjct: 200 KADIWSLGITAIELAKGEPPNSDM 223
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 66/146 (45%), Gaps = 24/146 (16%)
Query: 565 FMAECQALRNIRHRNLVK----IITACSTSDFQGNYFRALVYEFMHHGSLESCPRILSFL 620
++E LR ++H N+V+ II +T+ + +V E+ G L S +
Sbjct: 52 LVSEVNLLRELKHPNIVRYYDRIIDRTNTTLY-------IVMEYCEGGDLASVITKGTKE 104
Query: 621 RR-------LNIAIDVASALEYLHHHCK--KPIVHCDLKPSNVLLDNDMTAHMGDFGLTR 671
R+ L + + AL+ H ++H DLKP+NV LD +GDFGL R
Sbjct: 105 RQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR 164
Query: 672 FIPEVMSSNQCSSVGLKGTVGYATPE 697
+++ ++ + GT Y +PE
Sbjct: 165 ----ILNHDEDFAKEFVGTPYYMSPE 186
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 103/266 (38%), Gaps = 52/266 (19%)
Query: 517 SSSRKDLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ-RGALKSFMAECQALRNI 575
S +R D L S A V + +A+K + L + + ++ + E QA+
Sbjct: 6 SINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQC 65
Query: 576 RHRNLVKIITACSTSD--------FQG----NYFRALVYEFMHHGSLESCPRILSFLRRL 623
H N+V T+ D G + + +V + H + I + LR
Sbjct: 66 HHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILR-- 123
Query: 624 NIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPE--VMSSNQ 681
+V LEYLH K +H D+K N+LL D + + DFG++ F+ ++ N+
Sbjct: 124 ----EVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNK 176
Query: 682 CSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNF 725
+ GT + PE +GI +E+ TG P H +
Sbjct: 177 VRKTFV-GTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAP----------YHKY 225
Query: 726 VKMALPDQILQVLDPLFLVGGVQEGE 751
M + LQ DP L GVQ+ E
Sbjct: 226 PPMKVLMLTLQN-DPPSLETGVQDKE 250
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 67/154 (43%), Gaps = 25/154 (16%)
Query: 535 ATVYKGILDLDQTFIAVKVLFLHQRG-ALKSFMAECQALRNIRHRNLVKIITAC----ST 589
V++ +D A+K + L R A + M E +AL + H +V+ A +T
Sbjct: 19 GVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTT 78
Query: 590 SDFQGNYFRALVYEFMH-------------HGSLESCPRILSFLRRLNIAIDVASALEYL 636
Q + + +Y M ++E R + L+I + +A A+E+L
Sbjct: 79 EKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVC----LHIFLQIAEAVEFL 134
Query: 637 HHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLT 670
H K ++H DLKPSN+ D +GDFGL
Sbjct: 135 H---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLV 165
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 17/143 (11%)
Query: 536 TVYKGILDLDQTFIAVKVL---FLHQRGALKSFMAECQALRNIRHRNLVKIITACST--- 589
Y +LD + +A+K L F +Q A +++ E ++ + H+N++ ++ +
Sbjct: 42 AAYDAVLDRN---VAIKKLSRPFQNQTHAKRAY-RELVLMKXVNHKNIISLLNVFTPQKT 97
Query: 590 -SDFQGNYFRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCD 648
+FQ Y LV E M + L R + + +++LH I+H D
Sbjct: 98 LEEFQDVY---LVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAG---IIHRD 151
Query: 649 LKPSNVLLDNDMTAHMGDFGLTR 671
LKPSN+++ +D T + DFGL R
Sbjct: 152 LKPSNIVVKSDXTLKILDFGLAR 174
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 93/218 (42%), Gaps = 52/218 (23%)
Query: 528 SYESLVKATVYKGILDLDQTF-IAVKVLFLHQRGALK-SFMAECQALRNI-RHRNLVKII 584
++ +V+AT + G+ D +AVK+L K + M+E + + ++ +H N+V ++
Sbjct: 58 AFGKVVEATAF-GLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLL 116
Query: 585 TACSTSDFQGNYFRALVYEFMHHGSLESCPRILSFLRR----------LNIAIDVASALE 634
AC+ G ++ E+ +G L L+FLRR IA S +
Sbjct: 117 GACTHG---GPVL--VITEYCCYGDL------LNFLRRKSRVLETDPAFAIANSTLSTRD 165
Query: 635 YLHHHCK----------KPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSS 684
LH + K +H D+ NVLL N A +GDFGL R I + SN
Sbjct: 166 LLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI--MNDSNYIVK 223
Query: 685 VGLKGTVGYATPE---------------YGILLLEIFT 707
+ V + PE YGILL EIF+
Sbjct: 224 GNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 55/109 (50%), Gaps = 10/109 (9%)
Query: 566 MAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLE---SCPRILSFLRR 622
+ E + L+N RH +TA S FQ + V E+ + G L S R+ S R
Sbjct: 199 LTENRVLQNSRH----PFLTALKYS-FQTHDRLCFVMEYANGGELFFHLSRERVFSEDRA 253
Query: 623 LNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTR 671
++ SAL+YLH +K +V+ DLK N++LD D + DFGL +
Sbjct: 254 RFYGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK 300
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 55/109 (50%), Gaps = 10/109 (9%)
Query: 566 MAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLE---SCPRILSFLRR 622
+ E + L+N RH +TA S FQ + V E+ + G L S R+ S R
Sbjct: 196 LTENRVLQNSRH----PFLTALKYS-FQTHDRLCFVMEYANGGELFFHLSRERVFSEDRA 250
Query: 623 LNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTR 671
++ SAL+YLH +K +V+ DLK N++LD D + DFGL +
Sbjct: 251 RFYGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK 297
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 24/146 (16%)
Query: 565 FMAECQALRNIRHRNLVK----IITACSTSDFQGNYFRALVYEFMHHGSLESCPRILSFL 620
++E LR ++H N+V+ II +T+ + +V E+ G L S +
Sbjct: 52 LVSEVNLLRELKHPNIVRYYDRIIDRTNTTLY-------IVMEYCEGGDLASVITKGTKE 104
Query: 621 RR-------LNIAIDVASALEYLHHHCK--KPIVHCDLKPSNVLLDNDMTAHMGDFGLTR 671
R+ L + + AL+ H ++H DLKP+NV LD +GDFGL R
Sbjct: 105 RQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR 164
Query: 672 FIPEVMSSNQCSSVGLKGTVGYATPE 697
+++ + + GT Y +PE
Sbjct: 165 ----ILNHDTSFAKTFVGTPYYMSPE 186
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 17/143 (11%)
Query: 536 TVYKGILDLDQTFIAVKVL---FLHQRGALKSFMAECQALRNIRHRNLVKIITACST--- 589
Y +LD + +A+K L F +Q A +++ E ++ + H+N++ ++ +
Sbjct: 42 AAYDAVLDRN---VAIKKLSRPFQNQTHAKRAY-RELVLMKXVNHKNIISLLNVFTPQKT 97
Query: 590 -SDFQGNYFRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCD 648
+FQ Y LV E M + L R + + +++LH I+H D
Sbjct: 98 LEEFQDVY---LVMELMDANLXQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRD 151
Query: 649 LKPSNVLLDNDMTAHMGDFGLTR 671
LKPSN+++ +D T + DFGL R
Sbjct: 152 LKPSNIVVKSDXTLKILDFGLAR 174
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 87/206 (42%), Gaps = 50/206 (24%)
Query: 542 LDLDQ----TFIAVKVLFLHQ-RGALKSFMAECQALRNI-RHRNLVKIITACSTSDFQGN 595
LD D+ T +AVK+L L ++E + ++ I +H+N++ ++ AC+ G
Sbjct: 37 LDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD---GP 93
Query: 596 YFRALVYEFMHHGSL------------ESC-------PRILSFLRRLNIAIDVASALEYL 636
+ ++ E+ G+L E C LS ++ A VA +EYL
Sbjct: 94 LY--VIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL 151
Query: 637 HHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATP 696
K +H DL NVL+ D + DFGL R I + + ++ L V + P
Sbjct: 152 ---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRL--PVKWMAP 206
Query: 697 E---------------YGILLLEIFT 707
E +G+LL EIFT
Sbjct: 207 EALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/187 (20%), Positives = 86/187 (45%), Gaps = 28/187 (14%)
Query: 549 IAVKVLFL-HQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHH 607
+A+K L + + + F+ E + H N++ + + S +V E+M +
Sbjct: 53 VAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPV-----MIVTEYMEN 107
Query: 608 GSLESCPRI----LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAH 663
GSL++ + + ++ + + +++ ++YL VH DL N+L+++++
Sbjct: 108 GSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDMG---YVHRDLAARNILINSNLVCK 164
Query: 664 MGDFGLTRFI---PEVMSSNQCSSVGLKGTVGYATP-----------EYGILLLEIFT-G 708
+ DFGL+R + PE + + + ++ T A YGI++ E+ + G
Sbjct: 165 VSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYG 224
Query: 709 KRPTSDM 715
+RP +M
Sbjct: 225 ERPYWEM 231
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 94/223 (42%), Gaps = 60/223 (26%)
Query: 528 SYESLVKATVYKGILDLDQTF-IAVKVLFLHQRGALK-SFMAECQALRNI-RHRNLVKII 584
++ +V+AT + G+ D +AVK+L K + M+E + + ++ +H N+V ++
Sbjct: 58 AFGKVVEATAF-GLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLL 116
Query: 585 TACSTSDFQGNYFRALVYEFMHHGSLESCPRILSFLRR---------------------- 622
AC+ G ++ E+ +G L L+FLRR
Sbjct: 117 GACTHG---GPVL--VITEYCCYGDL------LNFLRRKRPPGLEYSYNPSHNPEEQLSS 165
Query: 623 ---LNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSS 679
L+ + VA + +L K +H D+ NVLL N A +GDFGL R I + S
Sbjct: 166 RDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI--MNDS 220
Query: 680 NQCSSVGLKGTVGYATPE---------------YGILLLEIFT 707
N + V + PE YGILL EIF+
Sbjct: 221 NYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 87/206 (42%), Gaps = 50/206 (24%)
Query: 542 LDLDQ----TFIAVKVLFLHQ-RGALKSFMAECQALRNI-RHRNLVKIITACSTSDFQGN 595
LD D+ T +AVK+L L ++E + ++ I +H+N++ ++ AC+ G
Sbjct: 52 LDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD---GP 108
Query: 596 YFRALVYEFMHHGSL------------ESC-------PRILSFLRRLNIAIDVASALEYL 636
+ ++ E+ G+L E C LS ++ A VA +EYL
Sbjct: 109 LY--VIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL 166
Query: 637 HHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATP 696
K +H DL NVL+ D + DFGL R I + + ++ L V + P
Sbjct: 167 ---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRL--PVKWMAP 221
Query: 697 E---------------YGILLLEIFT 707
E +G+LL EIFT
Sbjct: 222 EALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 55/109 (50%), Gaps = 10/109 (9%)
Query: 566 MAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLE---SCPRILSFLRR 622
+ E + L+N RH +TA S FQ + V E+ + G L S R+ S R
Sbjct: 56 LTENRVLQNSRH----PFLTALKYS-FQTHDRLCFVMEYANGGELFFHLSRERVFSEDRA 110
Query: 623 LNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTR 671
++ SAL+YLH +K +V+ DLK N++LD D + DFGL +
Sbjct: 111 RFYGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK 157
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 92/210 (43%), Gaps = 48/210 (22%)
Query: 532 LVKATVYKGIL-DLDQTFIAVKVLFLHQRGALKS---FMAECQALRNIRHRNLVKIITAC 587
+V V KG++ D +T +A+K + ++ +++ F+ E ++ ++V+++
Sbjct: 27 MVYEGVAKGVVKDEPETRVAIKTV--NEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV 84
Query: 588 STSDFQGNYFRALVYEFMHHGSLESCPRIL-------------SFLRRLNIAIDVASALE 634
S QG ++ E M G L+S R L S + + +A ++A +
Sbjct: 85 S----QGQP-TLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 635 YLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKG--TVG 692
YL+ + VH DL N + D T +GDFG+TR I E + G KG V
Sbjct: 140 YLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRK----GGKGLLPVR 192
Query: 693 YATPE---------------YGILLLEIFT 707
+ +PE +G++L EI T
Sbjct: 193 WMSPESLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 69/153 (45%), Gaps = 18/153 (11%)
Query: 531 SLVKATVYKGIL--DLDQTFIAVKVLFLHQRGALKSFMAECQ---ALRNIRHRNLVKIIT 585
S V TV+KG+ + + I V + + + +SF A A+ ++ H ++V+++
Sbjct: 41 SGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLG 100
Query: 586 ACSTSDFQGNYFRALVYEFMHHGSLESCPR----ILSFLRRLNIAIDVASALEYLHHHCK 641
C S Q LV +++ GSL R L LN + +A + YL H
Sbjct: 101 LCPGSSLQ------LVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHG- 153
Query: 642 KPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIP 674
+VH +L NVLL + + DFG+ +P
Sbjct: 154 --MVHRNLAARNVLLKSPSQVQVADFGVADLLP 184
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 58/136 (42%), Gaps = 19/136 (13%)
Query: 568 ECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSL-ESCPRILSF--LRRLN 624
E L+++ H N++K+ F+ + LV EF G L E F N
Sbjct: 96 EISLLKSLDHPNIIKLFDV-----FEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAAN 150
Query: 625 IAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDND---MTAHMGDFGLTRFIPEVMSSNQ 681
I + S + YLH H IVH D+KP N+LL+N + + DFGL+ F S
Sbjct: 151 IMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNIKIVDFGLSSFF-----SKD 202
Query: 682 CSSVGLKGTVGYATPE 697
GT Y PE
Sbjct: 203 YKLRDRLGTAYYIAPE 218
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 55/109 (50%), Gaps = 10/109 (9%)
Query: 566 MAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLE---SCPRILSFLRR 622
+ E + L+N RH +TA S FQ + V E+ + G L S R+ S R
Sbjct: 58 LTENRVLQNSRH----PFLTALKYS-FQTHDRLCFVMEYANGGELFFHLSRERVFSEDRA 112
Query: 623 LNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTR 671
++ SAL+YLH +K +V+ DLK N++LD D + DFGL +
Sbjct: 113 RFYGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK 159
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 55/109 (50%), Gaps = 10/109 (9%)
Query: 566 MAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLE---SCPRILSFLRR 622
+ E + L+N RH +TA S FQ + V E+ + G L S R+ S R
Sbjct: 57 LTENRVLQNSRH----PFLTALKYS-FQTHDRLCFVMEYANGGELFFHLSRERVFSEDRA 111
Query: 623 LNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTR 671
++ SAL+YLH +K +V+ DLK N++LD D + DFGL +
Sbjct: 112 RFYGAEIVSALDYLH--SEKNVVYRDLKLENLMLDKDGHIKITDFGLCK 158
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 91/224 (40%), Gaps = 48/224 (21%)
Query: 537 VYKGILDLDQTFIAVKVLFLHQRGA-------LKSFMAECQALRNIRHRNLVKIITACST 589
V+KG L D++ +A+K L L + F E + N+ H N+VK+
Sbjct: 35 VHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHN 94
Query: 590 SDFQGNYFRALVYEFMHHGSL------ESCPRILSFLRRLNIAIDVASALEYLHHHCKKP 643
+V EF+ G L ++ P + + +L + +D+A +EY+ + P
Sbjct: 95 PP-------RMVMEFVPCGDLYHRLLDKAHP--IKWSVKLRLMLDIALGIEYMQNQ-NPP 144
Query: 644 IVHCDLKPSNVLLDN-----DMTAHMGDFGLTR---------------FIPEVMSSNQCS 683
IVH DL+ N+ L + + A + DFG ++ PE + + + S
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSGLLGNFQWMAPETIGAEEES 204
Query: 684 SVGLKGTVGYATPEYGILLLEIFTGKRPTSDMFTEGLDLHNFVK 727
T +A ++L I TG+ P + + N ++
Sbjct: 205 YTEKADTYSFA-----MILYTILTGEGPFDEYSYGKIKFINMIR 243
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 70/169 (41%), Gaps = 31/169 (18%)
Query: 566 MAECQALRNIRHRNLVKIITACSTSDFQGNYFRA---LVYEFMHHG------------SL 610
+ E + L+ ++H N+V +I C T N + LV++F H +L
Sbjct: 65 LREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTL 124
Query: 611 ESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLT 670
R++ L + L Y+H + I+H D+K +NVL+ D + DFGL
Sbjct: 125 SEIKRVMQML---------LNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLA 172
Query: 671 RFIPEVMSSNQCSSVGLKGTVGYATPEYGILLLEIFTGKRPTSDMFTEG 719
R +S T+ Y PE +LL E G P D++ G
Sbjct: 173 RAFSLAKNSQPNRYXNRVVTLWYRPPE--LLLGERDYG--PPIDLWGAG 217
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 86/206 (41%), Gaps = 50/206 (24%)
Query: 542 LDLDQ----TFIAVKVLFLHQ-RGALKSFMAECQALRNI-RHRNLVKIITACSTSDFQGN 595
LD D+ T +AVK+L L ++E + ++ I +H+N++ ++ AC+ G
Sbjct: 52 LDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD---GP 108
Query: 596 YFRALVYEFMHHGSLESCPRI-------------------LSFLRRLNIAIDVASALEYL 636
+ ++ E+ G+L + LS ++ A VA +EYL
Sbjct: 109 LY--VIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYL 166
Query: 637 HHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATP 696
K +H DL NVL+ D + DFGL R I + + ++ L V + P
Sbjct: 167 ---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRL--PVKWMAP 221
Query: 697 E---------------YGILLLEIFT 707
E +G+LL EIFT
Sbjct: 222 EALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 86/215 (40%), Gaps = 39/215 (18%)
Query: 528 SYESLVK------ATVYKGILDLDQTFIAVKVLFLH--QRGALKSFMAECQALRNIRHRN 579
YE L K V+K +A+K + + + G + + E + L+ ++H N
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 580 LVKIITACSTSDFQGNYFRA---LVYEFMHHG------------SLESCPRILSFLRRLN 624
+V +I C T N + LV++F H +L R++ L
Sbjct: 79 VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQML---- 134
Query: 625 IAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSS 684
+ L Y+H + I+H D+K +NVL+ D + DFGL R +S
Sbjct: 135 -----LNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRY 186
Query: 685 VGLKGTVGYATPEYGILLLEIFTGKRPTSDMFTEG 719
T+ Y PE +LL E G P D++ G
Sbjct: 187 XNRVVTLWYRPPE--LLLGERDYG--PPIDLWGAG 217
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 70/169 (41%), Gaps = 31/169 (18%)
Query: 566 MAECQALRNIRHRNLVKIITACSTSDFQGNYFRA---LVYEFMHHG------------SL 610
+ E + L+ ++H N+V +I C T N + LV++F H +L
Sbjct: 64 LREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTL 123
Query: 611 ESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLT 670
R++ L + L Y+H + I+H D+K +NVL+ D + DFGL
Sbjct: 124 SEIKRVMQML---------LNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLA 171
Query: 671 RFIPEVMSSNQCSSVGLKGTVGYATPEYGILLLEIFTGKRPTSDMFTEG 719
R +S T+ Y PE +LL E G P D++ G
Sbjct: 172 RAFSLAKNSQPNRYXNRVVTLWYRPPE--LLLGERDYG--PPIDLWGAG 216
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 17/143 (11%)
Query: 536 TVYKGILDLDQTFIAVKVL---FLHQRGALKSFMAECQALRNIRHRNLVKIITACSTS-- 590
Y +LD + +A+K L F +Q A +++ E ++ + H+N++ ++ +
Sbjct: 42 AAYDAVLDRN---VAIKKLSRPFQNQTHAKRAY-RELVLMKXVNHKNIISLLNVFTPQKT 97
Query: 591 --DFQGNYFRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCD 648
+FQ Y LV E M + L R + + +++LH I+H D
Sbjct: 98 LEEFQDVY---LVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRD 151
Query: 649 LKPSNVLLDNDMTAHMGDFGLTR 671
LKPSN+++ +D T + DFGL R
Sbjct: 152 LKPSNIVVKSDXTLKILDFGLAR 174
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 64/149 (42%), Gaps = 26/149 (17%)
Query: 535 ATVYKGILDLDQTFIAVKVLFL--HQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
VYK L +A+K + L G + + E L+ + H N+VK++ T +
Sbjct: 24 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 83
Query: 593 QGNYFRALVYEFMHHGSLE----------SCPRILSFLRRLNIAIDVASALEYLHHHCKK 642
LV+EF+H + P I S+L +L L + H H
Sbjct: 84 L-----YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL------LQGLAFCHSHR-- 130
Query: 643 PIVHCDLKPSNVLLDNDMTAHMGDFGLTR 671
++H DLKP N+L++ + + DFGL R
Sbjct: 131 -VLHRDLKPQNLLINTEGAIKLADFGLAR 158
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 64/140 (45%), Gaps = 11/140 (7%)
Query: 536 TVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTS----D 591
Y +LD + + F +Q A +++ E ++ + H+N++ ++ + +
Sbjct: 35 AAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLNVFTPQKTLEE 93
Query: 592 FQGNYFRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKP 651
FQ Y LV E M + L R + + +++LH I+H DLKP
Sbjct: 94 FQDVY---LVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLH---SAGIIHRDLKP 147
Query: 652 SNVLLDNDMTAHMGDFGLTR 671
SN+++ +D T + DFGL R
Sbjct: 148 SNIVVKSDXTLKILDFGLAR 167
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 62/140 (44%), Gaps = 16/140 (11%)
Query: 537 VYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNY 596
VYK A KV+ L+ +M E L + H N+VK++ A ++ N
Sbjct: 53 VYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY---YENNL 109
Query: 597 FRALVYEFMHHGSLESCPRILSFLRRLN------IAIDVASALEYLHHHCKKPIVHCDLK 650
+ ++ EF G++++ +L R L + AL YLH + I+H DLK
Sbjct: 110 W--ILIEFCAGGAVDAV--MLELERPLTESQIQVVCKQTLDALNYLHDN---KIIHRDLK 162
Query: 651 PSNVLLDNDMTAHMGDFGLT 670
N+L D + DFG++
Sbjct: 163 AGNILFTLDGDIKLADFGVS 182
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 64/140 (45%), Gaps = 11/140 (7%)
Query: 536 TVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACST----SD 591
Y +LD + + F +Q A +++ E ++ + H+N++ ++ + +
Sbjct: 42 AAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLNVFTPQKTLEE 100
Query: 592 FQGNYFRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKP 651
FQ Y LV E M + L R + + +++LH I+H DLKP
Sbjct: 101 FQDVY---LVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLH---SAGIIHRDLKP 154
Query: 652 SNVLLDNDMTAHMGDFGLTR 671
SN+++ +D T + DFGL R
Sbjct: 155 SNIVVKSDXTLKILDFGLAR 174
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 62/140 (44%), Gaps = 16/140 (11%)
Query: 537 VYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNY 596
VYK A KV+ L+ +M E L + H N+VK++ A ++ N
Sbjct: 53 VYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY---YENNL 109
Query: 597 FRALVYEFMHHGSLESCPRILSFLRRLN------IAIDVASALEYLHHHCKKPIVHCDLK 650
+ ++ EF G++++ +L R L + AL YLH + I+H DLK
Sbjct: 110 W--ILIEFCAGGAVDAV--MLELERPLTESQIQVVCKQTLDALNYLHDN---KIIHRDLK 162
Query: 651 PSNVLLDNDMTAHMGDFGLT 670
N+L D + DFG++
Sbjct: 163 AGNILFTLDGDIKLADFGVS 182
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 62/140 (44%), Gaps = 16/140 (11%)
Query: 537 VYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNY 596
VYK A KV+ L+ +M E L + H N+VK++ A ++ N
Sbjct: 53 VYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY---YENNL 109
Query: 597 FRALVYEFMHHGSLESCPRILSFLRRLN------IAIDVASALEYLHHHCKKPIVHCDLK 650
+ ++ EF G++++ +L R L + AL YLH + I+H DLK
Sbjct: 110 W--ILIEFCAGGAVDAV--MLELERPLTESQIQVVCKQTLDALNYLHDN---KIIHRDLK 162
Query: 651 PSNVLLDNDMTAHMGDFGLT 670
N+L D + DFG++
Sbjct: 163 AGNILFTLDGDIKLADFGVS 182
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 69/153 (45%), Gaps = 18/153 (11%)
Query: 531 SLVKATVYKGIL--DLDQTFIAVKVLFLHQRGALKSFMAECQ---ALRNIRHRNLVKIIT 585
S V TV+KG+ + + I V + + + +SF A A+ ++ H ++V+++
Sbjct: 23 SGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLG 82
Query: 586 ACSTSDFQGNYFRALVYEFMHHGSLESCPR----ILSFLRRLNIAIDVASALEYLHHHCK 641
C S Q LV +++ GSL R L LN + +A + YL H
Sbjct: 83 LCPGSSLQ------LVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHG- 135
Query: 642 KPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIP 674
+VH +L NVLL + + DFG+ +P
Sbjct: 136 --MVHRNLAARNVLLKSPSQVQVADFGVADLLP 166
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 82/183 (44%), Gaps = 34/183 (18%)
Query: 550 AVKVL---FLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMH 606
A+KVL L R +++ M E L + H +VK+ A T +G + L+ +F+
Sbjct: 56 AMKVLKKATLKVRDRVRTKM-ERDILVEVNHPFIVKLHYAFQT---EGKLY--LILDFLR 109
Query: 607 HGSLESCPRILSFLRRLNIAI---DVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAH 663
G L + ++ ++A AL++LH I++ DLKP N+LLD +
Sbjct: 110 GGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIK 166
Query: 664 MGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTG 708
+ DFGL++ ++ + GTV Y PE +G+L+ E+ TG
Sbjct: 167 LTDFGLSK----ESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
Query: 709 KRP 711
P
Sbjct: 223 TLP 225
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 71/159 (44%), Gaps = 17/159 (10%)
Query: 548 FIAVKVLFLH--QRGALKSFMAECQALRNIR---HRNLVKIITACSTSDFQGNYFRALVY 602
F+A+K + + + G S + E LR++ H N+V++ C+ S LV+
Sbjct: 39 FVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVF 98
Query: 603 EFMHHG---SLESCPRILSFLRRL-NIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN 658
E + L+ P + ++ + L++LH H +VH DLKP N+L+ +
Sbjct: 99 EHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTS 155
Query: 659 DMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE 697
+ DFGL R + S Q + + T+ Y PE
Sbjct: 156 SGQIKLADFGLAR-----IYSFQMALTSVVVTLWYRAPE 189
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 88/204 (43%), Gaps = 25/204 (12%)
Query: 537 VYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNY 596
VYK A KV+ L+ +M E L + H N+VK++ A ++ N
Sbjct: 26 VYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY---YENNL 82
Query: 597 FRALVYEFMHHGSLESCPRILSFLRRLN------IAIDVASALEYLHHHCKKPIVHCDLK 650
+ ++ EF G++++ +L R L + AL YLH + I+H DLK
Sbjct: 83 W--ILIEFCAGGAVDAV--MLELERPLTESQIQVVCKQTLDALNYLHDN---KIIHRDLK 135
Query: 651 PSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPEYGILLLEIFTGKR 710
N+L D + DFG++ + S + GT + PE +++ E + R
Sbjct: 136 AGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFI---GTPYWMAPE--VVMCET-SKDR 189
Query: 711 P---TSDMFTEGLDLHNFVKMALP 731
P +D+++ G+ L ++ P
Sbjct: 190 PYDYKADVWSLGITLIEMAEIEPP 213
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 64/149 (42%), Gaps = 26/149 (17%)
Query: 535 ATVYKGILDLDQTFIAVKVLFL--HQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
VYK L +A+K + L G + + E L+ + H N+VK++ T +
Sbjct: 24 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 83
Query: 593 QGNYFRALVYEFMHHGSLE----------SCPRILSFLRRLNIAIDVASALEYLHHHCKK 642
LV+EF+H + P I S+L +L L + H H
Sbjct: 84 L-----YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL------LQGLAFCHSHR-- 130
Query: 643 PIVHCDLKPSNVLLDNDMTAHMGDFGLTR 671
++H DLKP N+L++ + + DFGL R
Sbjct: 131 -VLHRDLKPQNLLINTEGAIKLADFGLAR 158
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 22/99 (22%)
Query: 628 DVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGL 687
++A AL++LH I++ DLKP N+LLD + + DFGL++ ++ +
Sbjct: 135 ELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK----ESIDHEKKAYSF 187
Query: 688 KGTVGYATPE---------------YGILLLEIFTGKRP 711
GTV Y PE +G+L+ E+ TG P
Sbjct: 188 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 226
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 22/99 (22%)
Query: 628 DVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGL 687
++A AL++LH I++ DLKP N+LLD + + DFGL++ ++ +
Sbjct: 134 ELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSK----ESIDHEKKAYSF 186
Query: 688 KGTVGYATPE---------------YGILLLEIFTGKRP 711
GTV Y PE +G+L+ E+ TG P
Sbjct: 187 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLP 225
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 91/224 (40%), Gaps = 48/224 (21%)
Query: 537 VYKGILDLDQTFIAVKVLFLHQRGA-------LKSFMAECQALRNIRHRNLVKIITACST 589
V+KG L D++ +A+K L L + F E + N+ H N+VK+
Sbjct: 35 VHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHN 94
Query: 590 SDFQGNYFRALVYEFMHHGSL------ESCPRILSFLRRLNIAIDVASALEYLHHHCKKP 643
+V EF+ G L ++ P + + +L + +D+A +EY+ + P
Sbjct: 95 PP-------RMVMEFVPCGDLYHRLLDKAHP--IKWSVKLRLMLDIALGIEYMQNQ-NPP 144
Query: 644 IVHCDLKPSNVLLDN-----DMTAHMGDFGLTR---------------FIPEVMSSNQCS 683
IVH DL+ N+ L + + A + DF L++ PE + + + S
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSGLLGNFQWMAPETIGAEEES 204
Query: 684 SVGLKGTVGYATPEYGILLLEIFTGKRPTSDMFTEGLDLHNFVK 727
T +A ++L I TG+ P + + N ++
Sbjct: 205 YTEKADTYSFA-----MILYTILTGEGPFDEYSYGKIKFINMIR 243
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 71/159 (44%), Gaps = 17/159 (10%)
Query: 548 FIAVKVLFLH--QRGALKSFMAECQALRNIR---HRNLVKIITACSTSDFQGNYFRALVY 602
F+A+K + + + G S + E LR++ H N+V++ C+ S LV+
Sbjct: 39 FVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVF 98
Query: 603 EFMHHG---SLESCPRILSFLRRL-NIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN 658
E + L+ P + ++ + L++LH H +VH DLKP N+L+ +
Sbjct: 99 EHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTS 155
Query: 659 DMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE 697
+ DFGL R + S Q + + T+ Y PE
Sbjct: 156 SGQIKLADFGLAR-----IYSFQMALTSVVVTLWYRAPE 189
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 64/149 (42%), Gaps = 26/149 (17%)
Query: 535 ATVYKGILDLDQTFIAVKVLFL--HQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
VYK L +A+K + L G + + E L+ + H N+VK++ T +
Sbjct: 17 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 76
Query: 593 QGNYFRALVYEFMHHGSLE----------SCPRILSFLRRLNIAIDVASALEYLHHHCKK 642
LV+EF+H + P I S+L +L L + H H
Sbjct: 77 L-----YLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQL------LQGLAFCHSHR-- 123
Query: 643 PIVHCDLKPSNVLLDNDMTAHMGDFGLTR 671
++H DLKP N+L++ + + DFGL R
Sbjct: 124 -VLHRDLKPENLLINTEGAIKLADFGLAR 151
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 62/143 (43%), Gaps = 16/143 (11%)
Query: 535 ATVYKGILDLDQTFIAVKV-LFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQ 593
VYK + +TF K+ L G + + E L+ ++H N+VK+ T
Sbjct: 16 GVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTK--- 72
Query: 594 GNYFRALVYEFMHHGS-----LESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCD 648
+ LV F H L+ C L + + + + + + Y H + ++H D
Sbjct: 73 ----KRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRD 125
Query: 649 LKPSNVLLDNDMTAHMGDFGLTR 671
LKP N+L++ + + DFGL R
Sbjct: 126 LKPQNLLINREGELKIADFGLAR 148
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 64/149 (42%), Gaps = 26/149 (17%)
Query: 535 ATVYKGILDLDQTFIAVKVLFL--HQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
VYK L +A+K + L G + + E L+ + H N+VK++ T +
Sbjct: 17 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 76
Query: 593 QGNYFRALVYEFMHHGSLE----------SCPRILSFLRRLNIAIDVASALEYLHHHCKK 642
LV+EF+H + P I S+L +L L + H H
Sbjct: 77 L-----YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL------LQGLAFCHSHR-- 123
Query: 643 PIVHCDLKPSNVLLDNDMTAHMGDFGLTR 671
++H DLKP N+L++ + + DFGL R
Sbjct: 124 -VLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 62/143 (43%), Gaps = 16/143 (11%)
Query: 535 ATVYKGILDLDQTFIAVKV-LFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQ 593
VYK + +TF K+ L G + + E L+ ++H N+VK+ T
Sbjct: 16 GVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTK--- 72
Query: 594 GNYFRALVYEFMHHGS-----LESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCD 648
+ LV F H L+ C L + + + + + + Y H + ++H D
Sbjct: 73 ----KRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRD 125
Query: 649 LKPSNVLLDNDMTAHMGDFGLTR 671
LKP N+L++ + + DFGL R
Sbjct: 126 LKPQNLLINREGELKIADFGLAR 148
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 64/149 (42%), Gaps = 26/149 (17%)
Query: 535 ATVYKGILDLDQTFIAVKVLFL--HQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
VYK L +A+K + L G + + E L+ + H N+VK++ T +
Sbjct: 21 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 80
Query: 593 QGNYFRALVYEFMHHGSLE----------SCPRILSFLRRLNIAIDVASALEYLHHHCKK 642
LV+EF+H + P I S+L +L L + H H
Sbjct: 81 L-----YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL------LQGLAFCHSHR-- 127
Query: 643 PIVHCDLKPSNVLLDNDMTAHMGDFGLTR 671
++H DLKP N+L++ + + DFGL R
Sbjct: 128 -VLHRDLKPQNLLINTEGAIKLADFGLAR 155
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 64/149 (42%), Gaps = 26/149 (17%)
Query: 535 ATVYKGILDLDQTFIAVKVLFL--HQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
VYK L +A+K + L G + + E L+ + H N+VK++ T +
Sbjct: 19 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 78
Query: 593 QGNYFRALVYEFMHHGSLE----------SCPRILSFLRRLNIAIDVASALEYLHHHCKK 642
LV+EF+H + P I S+L +L L + H H
Sbjct: 79 L-----YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL------LQGLAFCHSHR-- 125
Query: 643 PIVHCDLKPSNVLLDNDMTAHMGDFGLTR 671
++H DLKP N+L++ + + DFGL R
Sbjct: 126 -VLHRDLKPENLLINTEGAIKLADFGLAR 153
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 64/149 (42%), Gaps = 26/149 (17%)
Query: 535 ATVYKGILDLDQTFIAVKVLFL--HQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
VYK L +A+K + L G + + E L+ + H N+VK++ T +
Sbjct: 19 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 78
Query: 593 QGNYFRALVYEFMHHGSLE----------SCPRILSFLRRLNIAIDVASALEYLHHHCKK 642
LV+EF+H + P I S+L +L L + H H
Sbjct: 79 L-----YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL------LQGLAFCHSHR-- 125
Query: 643 PIVHCDLKPSNVLLDNDMTAHMGDFGLTR 671
++H DLKP N+L++ + + DFGL R
Sbjct: 126 -VLHRDLKPQNLLINTEGAIKLADFGLAR 153
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 70/175 (40%), Gaps = 34/175 (19%)
Query: 558 QRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESCPRIL 617
+R +++ E Q ++ + H LV + + FQ +V + + G L +
Sbjct: 55 ERNEVRNVFKELQIMQGLEHPFLVNLWYS-----FQDEEDMFMVVDLLLGGDLRYHLQQN 109
Query: 618 SFLRRLNIAI---DVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIP 674
+ + + ++ AL+YL + + I+H D+KP N+LLD H+ DF + +P
Sbjct: 110 VHFKEETVKLFICELVMALDYLQN---QRIIHRDMKPDNILLDEHGHVHITDFNIAAMLP 166
Query: 675 EVMSSNQCSSVGLKGTVGYATPEY------------------GILLLEIFTGKRP 711
+ + GT Y PE G+ E+ G+RP
Sbjct: 167 -----RETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRP 216
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 62/143 (43%), Gaps = 16/143 (11%)
Query: 535 ATVYKGILDLDQTFIAVKV-LFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQ 593
VYK + +TF K+ L G + + E L+ ++H N+VK+ T
Sbjct: 16 GVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTK--- 72
Query: 594 GNYFRALVYEFMHHGS-----LESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCD 648
+ LV F H L+ C L + + + + + + Y H + ++H D
Sbjct: 73 ----KRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRD 125
Query: 649 LKPSNVLLDNDMTAHMGDFGLTR 671
LKP N+L++ + + DFGL R
Sbjct: 126 LKPQNLLINREGELKIADFGLAR 148
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 64/149 (42%), Gaps = 26/149 (17%)
Query: 535 ATVYKGILDLDQTFIAVKVLFL--HQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
VYK L +A+K + L G + + E L+ + H N+VK++ T +
Sbjct: 20 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 79
Query: 593 QGNYFRALVYEFMHHGSLE----------SCPRILSFLRRLNIAIDVASALEYLHHHCKK 642
LV+EF+H + P I S+L +L L + H H
Sbjct: 80 L-----YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL------LQGLAFCHSHR-- 126
Query: 643 PIVHCDLKPSNVLLDNDMTAHMGDFGLTR 671
++H DLKP N+L++ + + DFGL R
Sbjct: 127 -VLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 64/149 (42%), Gaps = 26/149 (17%)
Query: 535 ATVYKGILDLDQTFIAVKVLFL--HQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
VYK L +A+K + L G + + E L+ + H N+VK++ T +
Sbjct: 20 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 79
Query: 593 QGNYFRALVYEFMHHGSLE----------SCPRILSFLRRLNIAIDVASALEYLHHHCKK 642
LV+EF+H + P I S+L +L L + H H
Sbjct: 80 L-----YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL------LQGLAFCHSHR-- 126
Query: 643 PIVHCDLKPSNVLLDNDMTAHMGDFGLTR 671
++H DLKP N+L++ + + DFGL R
Sbjct: 127 -VLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 64/149 (42%), Gaps = 26/149 (17%)
Query: 535 ATVYKGILDLDQTFIAVKVLFL--HQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
VYK L +A+K + L G + + E L+ + H N+VK++ T +
Sbjct: 18 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 77
Query: 593 QGNYFRALVYEFMHHGSLE----------SCPRILSFLRRLNIAIDVASALEYLHHHCKK 642
LV+EF+H + P I S+L +L L + H H
Sbjct: 78 L-----YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL------LQGLAFCHSHR-- 124
Query: 643 PIVHCDLKPSNVLLDNDMTAHMGDFGLTR 671
++H DLKP N+L++ + + DFGL R
Sbjct: 125 -VLHRDLKPENLLINTEGAIKLADFGLAR 152
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 64/149 (42%), Gaps = 26/149 (17%)
Query: 535 ATVYKGILDLDQTFIAVKVLFL--HQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
VYK L +A+K + L G + + E L+ + H N+VK++ T +
Sbjct: 19 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 78
Query: 593 QGNYFRALVYEFMHHGSLE----------SCPRILSFLRRLNIAIDVASALEYLHHHCKK 642
LV+EF+H + P I S+L +L L + H H
Sbjct: 79 L-----YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL------LQGLAFCHSHR-- 125
Query: 643 PIVHCDLKPSNVLLDNDMTAHMGDFGLTR 671
++H DLKP N+L++ + + DFGL R
Sbjct: 126 -VLHRDLKPQNLLINTEGAIKLADFGLAR 153
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 64/144 (44%), Gaps = 16/144 (11%)
Query: 535 ATVYKGILDLDQTFIAVKVLFL--HQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
VYK L +A+K + L G + + E L+ + H N+VK++ T +
Sbjct: 20 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 79
Query: 593 QGNYFRAL---VYEFMHHGSLESCPR--ILSFLRRLNIAIDVASALEYLHHHCKKPIVHC 647
F L + +FM +L P I S+L +L L + H H ++H
Sbjct: 80 LYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQL------LQGLAFCHSHR---VLHR 130
Query: 648 DLKPSNVLLDNDMTAHMGDFGLTR 671
DLKP N+L++ + + DFGL R
Sbjct: 131 DLKPQNLLINTEGAIKLADFGLAR 154
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 64/139 (46%), Gaps = 23/139 (16%)
Query: 566 MAECQALRNIR-HRNLVKIITACSTSDFQGNYFRALVYEFMHHGSL-----ESCPRILSF 619
+ E LR + H N++++ ++ N F LV++ M G L E
Sbjct: 71 LKEVDILRKVSGHPNIIQL-----KDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKE 125
Query: 620 LRRLNIAI-DVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMS 678
R++ A+ +V AL L+ IVH DLKP N+LLD+DM + DFG F ++
Sbjct: 126 TRKIMRALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFG---FSCQLDP 176
Query: 679 SNQCSSVGLKGTVGYATPE 697
+ SV GT Y PE
Sbjct: 177 GEKLRSVC--GTPSYLAPE 193
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 61/135 (45%), Gaps = 19/135 (14%)
Query: 568 ECQALRNIR-HRNLVKIITACSTSDFQGNYFRALVYEFMHHGSL---ESCPRILSFLRRL 623
E LR + H +++ +I + ++ + F LV++ M G L + LS
Sbjct: 149 ETHILRQVAGHPHIITLIDS-----YESSSFMFLVFDLMRKGELFDYLTEKVALSEKETR 203
Query: 624 NIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLT-RFIPEVMSSNQC 682
+I + A+ +LH IVH DLKP N+LLD++M + DFG + P C
Sbjct: 204 SIMRSLLEAVSFLH---ANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELC 260
Query: 683 SSVGLKGTVGYATPE 697
GT GY PE
Sbjct: 261 ------GTPGYLAPE 269
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 64/149 (42%), Gaps = 26/149 (17%)
Query: 535 ATVYKGILDLDQTFIAVKVLFL--HQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
VYK L +A+K + L G + + E L+ + H N+VK++ T +
Sbjct: 17 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 76
Query: 593 QGNYFRALVYEFMHHGSLE----------SCPRILSFLRRLNIAIDVASALEYLHHHCKK 642
LV+EF+H + P I S+L +L L + H H
Sbjct: 77 L-----YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL------LQGLSFCHSHR-- 123
Query: 643 PIVHCDLKPSNVLLDNDMTAHMGDFGLTR 671
++H DLKP N+L++ + + DFGL R
Sbjct: 124 -VLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 73/166 (43%), Gaps = 31/166 (18%)
Query: 548 FIAVKVLFLH--QRGALKSFMAECQALRNIR---HRNLVKIITACSTSDFQGNYFRALVY 602
F+A+K + + + G S + E LR++ H N+V++ C+ S LV+
Sbjct: 39 FVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVF 98
Query: 603 EFMHHGSLESCPRILSFLRRL-----------NIAIDVASALEYLHHHCKKPIVHCDLKP 651
E + + ++L ++ ++ + L++LH H +VH DLKP
Sbjct: 99 EHVDQD-------LTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKP 148
Query: 652 SNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE 697
N+L+ + + DFGL R + S Q + + T+ Y PE
Sbjct: 149 QNILVTSSGQIKLADFGLAR-----IYSFQMALTSVVVTLWYRAPE 189
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 64/149 (42%), Gaps = 26/149 (17%)
Query: 535 ATVYKGILDLDQTFIAVKVLFL--HQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
VYK L +A+K + L G + + E L+ + H N+VK++ T +
Sbjct: 18 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 77
Query: 593 QGNYFRALVYEFMHHGSLE----------SCPRILSFLRRLNIAIDVASALEYLHHHCKK 642
LV+EF+H + P I S+L +L L + H H
Sbjct: 78 L-----YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL------LQGLAFCHSHR-- 124
Query: 643 PIVHCDLKPSNVLLDNDMTAHMGDFGLTR 671
++H DLKP N+L++ + + DFGL R
Sbjct: 125 -VLHRDLKPQNLLINTEGAIKLADFGLAR 152
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 64/149 (42%), Gaps = 26/149 (17%)
Query: 535 ATVYKGILDLDQTFIAVKVLFL--HQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
VYK L +A+K + L G + + E L+ + H N+VK++ T +
Sbjct: 18 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 77
Query: 593 QGNYFRALVYEFMHHGSLE----------SCPRILSFLRRLNIAIDVASALEYLHHHCKK 642
LV+EF+H + P I S+L +L L + H H
Sbjct: 78 L-----YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL------LQGLAFCHSHR-- 124
Query: 643 PIVHCDLKPSNVLLDNDMTAHMGDFGLTR 671
++H DLKP N+L++ + + DFGL R
Sbjct: 125 -VLHRDLKPQNLLINTEGAIKLADFGLAR 152
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 64/149 (42%), Gaps = 26/149 (17%)
Query: 535 ATVYKGILDLDQTFIAVKVLFL--HQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
VYK L +A+K + L G + + E L+ + H N+VK++ T +
Sbjct: 17 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 76
Query: 593 QGNYFRALVYEFMHHGSLE----------SCPRILSFLRRLNIAIDVASALEYLHHHCKK 642
LV+EF+H + P I S+L +L L + H H
Sbjct: 77 L-----YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL------LQGLAFCHSHR-- 123
Query: 643 PIVHCDLKPSNVLLDNDMTAHMGDFGLTR 671
++H DLKP N+L++ + + DFGL R
Sbjct: 124 -VLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 64/149 (42%), Gaps = 26/149 (17%)
Query: 535 ATVYKGILDLDQTFIAVKVLFL--HQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
VYK L +A+K + L G + + E L+ + H N+VK++ T +
Sbjct: 17 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 76
Query: 593 QGNYFRALVYEFMHHGSLE----------SCPRILSFLRRLNIAIDVASALEYLHHHCKK 642
LV+EF+H + P I S+L +L L + H H
Sbjct: 77 L-----YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL------LQGLAFCHSHR-- 123
Query: 643 PIVHCDLKPSNVLLDNDMTAHMGDFGLTR 671
++H DLKP N+L++ + + DFGL R
Sbjct: 124 -VLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 65/143 (45%), Gaps = 11/143 (7%)
Query: 533 VKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTS-- 590
+ Y +LD + + F +Q A +++ E ++ + H+N++ ++ +
Sbjct: 39 IVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLNVFTPQKT 97
Query: 591 --DFQGNYFRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCD 648
+FQ Y LV E M + L R + + +++LH I+H D
Sbjct: 98 LEEFQDVY---LVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRD 151
Query: 649 LKPSNVLLDNDMTAHMGDFGLTR 671
LKPSN+++ +D T + DFGL R
Sbjct: 152 LKPSNIVVKSDCTLKILDFGLAR 174
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 64/149 (42%), Gaps = 26/149 (17%)
Query: 535 ATVYKGILDLDQTFIAVKVLFL--HQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
VYK L +A+K + L G + + E L+ + H N+VK++ T +
Sbjct: 16 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 75
Query: 593 QGNYFRALVYEFMHHGSLE----------SCPRILSFLRRLNIAIDVASALEYLHHHCKK 642
LV+EF+H + P I S+L +L L + H H
Sbjct: 76 L-----YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL------LQGLAFCHSHR-- 122
Query: 643 PIVHCDLKPSNVLLDNDMTAHMGDFGLTR 671
++H DLKP N+L++ + + DFGL R
Sbjct: 123 -VLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 64/149 (42%), Gaps = 26/149 (17%)
Query: 535 ATVYKGILDLDQTFIAVKVLFL--HQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
VYK L +A+K + L G + + E L+ + H N+VK++ T +
Sbjct: 16 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 75
Query: 593 QGNYFRALVYEFMHHGSLE----------SCPRILSFLRRLNIAIDVASALEYLHHHCKK 642
LV+EF+H + P I S+L +L L + H H
Sbjct: 76 L-----YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL------LQGLAFCHSHR-- 122
Query: 643 PIVHCDLKPSNVLLDNDMTAHMGDFGLTR 671
++H DLKP N+L++ + + DFGL R
Sbjct: 123 -VLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 62/140 (44%), Gaps = 25/140 (17%)
Query: 566 MAECQALRNIR-HRNLVKIITACSTSDFQGNYFRALVYEFMHHGSL-----ESCPRILSF 619
+ E LR + H N++++ ++ N F LV++ M G L E
Sbjct: 58 LKEVDILRKVSGHPNIIQL-----KDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKE 112
Query: 620 LRRLNIAI-DVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLT-RFIPEVM 677
R++ A+ +V AL L+ IVH DLKP N+LLD+DM + DFG + + P
Sbjct: 113 TRKIMRALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK 166
Query: 678 SSNQCSSVGLKGTVGYATPE 697
C GT Y PE
Sbjct: 167 LREVC------GTPSYLAPE 180
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 64/144 (44%), Gaps = 16/144 (11%)
Query: 535 ATVYKGILDLDQTFIAVKVLFL--HQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
VYK L +A+K + L G + + E L+ + H N+VK++ T +
Sbjct: 19 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 78
Query: 593 QGNYFRAL---VYEFMHHGSLESCPR--ILSFLRRLNIAIDVASALEYLHHHCKKPIVHC 647
F L + +FM +L P I S+L +L L + H H ++H
Sbjct: 79 LYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQL------LQGLAFCHSHR---VLHR 129
Query: 648 DLKPSNVLLDNDMTAHMGDFGLTR 671
DLKP N+L++ + + DFGL R
Sbjct: 130 DLKPQNLLINTEGAIKLADFGLAR 153
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 64/149 (42%), Gaps = 26/149 (17%)
Query: 535 ATVYKGILDLDQTFIAVKVLFL--HQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
VYK L +A+K + L G + + E L+ + H N+VK++ T +
Sbjct: 17 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 76
Query: 593 QGNYFRALVYEFMHHGSLE----------SCPRILSFLRRLNIAIDVASALEYLHHHCKK 642
LV+EF+H + P I S+L +L L + H H
Sbjct: 77 L-----YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL------LQGLAFCHSHR-- 123
Query: 643 PIVHCDLKPSNVLLDNDMTAHMGDFGLTR 671
++H DLKP N+L++ + + DFGL R
Sbjct: 124 -VLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 65/143 (45%), Gaps = 11/143 (7%)
Query: 533 VKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTS-- 590
+ Y +LD + + F +Q A +++ E ++ + H+N++ ++ +
Sbjct: 40 IVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLNVFTPQKT 98
Query: 591 --DFQGNYFRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCD 648
+FQ Y LV E M + L R + + +++LH I+H D
Sbjct: 99 LEEFQDVY---LVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRD 152
Query: 649 LKPSNVLLDNDMTAHMGDFGLTR 671
LKPSN+++ +D T + DFGL R
Sbjct: 153 LKPSNIVVKSDCTLKILDFGLAR 175
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 86/206 (41%), Gaps = 50/206 (24%)
Query: 542 LDLDQ----TFIAVKVLFLHQ-RGALKSFMAECQALRNI-RHRNLVKIITACSTSDFQGN 595
LD D+ T +AVK+L L ++E + ++ I +H+N++ ++ AC+ G
Sbjct: 93 LDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD---GP 149
Query: 596 YFRALVYEFMHHGSLESCPRI-------------------LSFLRRLNIAIDVASALEYL 636
+ ++ E+ G+L + LS ++ A VA +EYL
Sbjct: 150 LY--VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL 207
Query: 637 HHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATP 696
K +H DL NVL+ D + DFGL R I + + ++ L V + P
Sbjct: 208 ---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRL--PVKWMAP 262
Query: 697 E---------------YGILLLEIFT 707
E +G+LL EIFT
Sbjct: 263 EALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 65/143 (45%), Gaps = 11/143 (7%)
Query: 533 VKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACST--- 589
+ Y +LD + + F +Q A +++ E ++ + H+N++ ++ +
Sbjct: 38 IVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLNVFTPQKT 96
Query: 590 -SDFQGNYFRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCD 648
+FQ Y LV E M + L R + + +++LH I+H D
Sbjct: 97 LEEFQDVY---LVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRD 150
Query: 649 LKPSNVLLDNDMTAHMGDFGLTR 671
LKPSN+++ +D T + DFGL R
Sbjct: 151 LKPSNIVVKSDCTLKILDFGLAR 173
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 86/206 (41%), Gaps = 50/206 (24%)
Query: 542 LDLDQ----TFIAVKVLFLHQ-RGALKSFMAECQALRNI-RHRNLVKIITACSTSDFQGN 595
LD D+ T +AVK+L L ++E + ++ I +H+N++ ++ AC+ G
Sbjct: 52 LDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD---GP 108
Query: 596 YFRALVYEFMHHGSLESCPRI-------------------LSFLRRLNIAIDVASALEYL 636
+ ++ E+ G+L + LS ++ A VA +EYL
Sbjct: 109 LY--VIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL 166
Query: 637 HHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATP 696
K +H DL NVL+ D + DFGL R I + + ++ L V + P
Sbjct: 167 ---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRL--PVKWMAP 221
Query: 697 E---------------YGILLLEIFT 707
E +G+LL EIFT
Sbjct: 222 EALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 65/143 (45%), Gaps = 11/143 (7%)
Query: 533 VKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACST--- 589
+ Y +LD + + F +Q A +++ E ++ + H+N++ ++ +
Sbjct: 32 IVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLNVFTPQKT 90
Query: 590 -SDFQGNYFRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCD 648
+FQ Y LV E M + L R + + +++LH I+H D
Sbjct: 91 LEEFQDVY---LVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRD 144
Query: 649 LKPSNVLLDNDMTAHMGDFGLTR 671
LKPSN+++ +D T + DFGL R
Sbjct: 145 LKPSNIVVKSDCTLKILDFGLAR 167
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 64/149 (42%), Gaps = 26/149 (17%)
Query: 535 ATVYKGILDLDQTFIAVKVLFL--HQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
VYK L +A+K + L G + + E L+ + H N+VK++ T +
Sbjct: 17 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 76
Query: 593 QGNYFRALVYEFMHHGSLE----------SCPRILSFLRRLNIAIDVASALEYLHHHCKK 642
LV+EF+H + P I S+L +L L + H H
Sbjct: 77 L-----YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL------LQGLAFCHSHR-- 123
Query: 643 PIVHCDLKPSNVLLDNDMTAHMGDFGLTR 671
++H DLKP N+L++ + + DFGL R
Sbjct: 124 -VLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 86/206 (41%), Gaps = 50/206 (24%)
Query: 542 LDLDQ----TFIAVKVLFLHQ-RGALKSFMAECQALRNI-RHRNLVKIITACSTSDFQGN 595
LD D+ T +AVK+L L ++E + ++ I +H+N++ ++ AC+ G
Sbjct: 41 LDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD---GP 97
Query: 596 YFRALVYEFMHHGSLESCPRI-------------------LSFLRRLNIAIDVASALEYL 636
+ ++ E+ G+L + LS ++ A VA +EYL
Sbjct: 98 LY--VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL 155
Query: 637 HHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATP 696
K +H DL NVL+ D + DFGL R I + + ++ L V + P
Sbjct: 156 ---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRL--PVKWMAP 210
Query: 697 E---------------YGILLLEIFT 707
E +G+LL EIFT
Sbjct: 211 EALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 60/133 (45%), Gaps = 12/133 (9%)
Query: 568 ECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESCPRILSFLRRLNIAI 627
E + R ++H N+V++ + S F LV++ + G L + + +
Sbjct: 80 EARICRLLKHPNIVRLHDSISEEGFH-----YLVFDLVTGGELFEDIVAREYYSEADASH 134
Query: 628 DVASALEYLHHHCKKPIVHCDLKPSNVLLDND---MTAHMGDFGLTRFIPEVMSSNQCSS 684
+ LE ++H + IVH DLKP N+LL + + DFGL EV Q +
Sbjct: 135 CIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLA---IEVQGEQQ-AW 190
Query: 685 VGLKGTVGYATPE 697
G GT GY +PE
Sbjct: 191 FGFAGTPGYLSPE 203
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 86/206 (41%), Gaps = 50/206 (24%)
Query: 542 LDLDQ----TFIAVKVLFLHQ-RGALKSFMAECQALRNI-RHRNLVKIITACSTSDFQGN 595
LD D+ T +AVK+L L ++E + ++ I +H+N++ ++ AC+ G
Sbjct: 45 LDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD---GP 101
Query: 596 YFRALVYEFMHHGSLESCPRI-------------------LSFLRRLNIAIDVASALEYL 636
+ ++ E+ G+L + LS ++ A VA +EYL
Sbjct: 102 LY--VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL 159
Query: 637 HHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATP 696
K +H DL NVL+ D + DFGL R I + + ++ L V + P
Sbjct: 160 ---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRL--PVKWMAP 214
Query: 697 E---------------YGILLLEIFT 707
E +G+LL EIFT
Sbjct: 215 EALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 64/149 (42%), Gaps = 26/149 (17%)
Query: 535 ATVYKGILDLDQTFIAVKVLFL--HQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
VYK L +A+K + L G + + E L+ + H N+VK++ T +
Sbjct: 16 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 75
Query: 593 QGNYFRALVYEFMHHGSLE----------SCPRILSFLRRLNIAIDVASALEYLHHHCKK 642
LV+EF+H + P I S+L +L L + H H
Sbjct: 76 L-----YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL------LQGLAFCHSHR-- 122
Query: 643 PIVHCDLKPSNVLLDNDMTAHMGDFGLTR 671
++H DLKP N+L++ + + DFGL R
Sbjct: 123 -VLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 65/143 (45%), Gaps = 11/143 (7%)
Query: 533 VKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACST--- 589
+ Y +LD + + F +Q A +++ E ++ + H+N++ ++ +
Sbjct: 33 IVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLNVFTPQKT 91
Query: 590 -SDFQGNYFRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCD 648
+FQ Y LV E M + L R + + +++LH I+H D
Sbjct: 92 LEEFQDVY---LVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRD 145
Query: 649 LKPSNVLLDNDMTAHMGDFGLTR 671
LKPSN+++ +D T + DFGL R
Sbjct: 146 LKPSNIVVKSDCTLKILDFGLAR 168
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 64/149 (42%), Gaps = 26/149 (17%)
Query: 535 ATVYKGILDLDQTFIAVKVLFL--HQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
VYK L +A+K + L G + + E L+ + H N+VK++ T +
Sbjct: 21 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 80
Query: 593 QGNYFRALVYEFMHHGSLE----------SCPRILSFLRRLNIAIDVASALEYLHHHCKK 642
LV+EF+H + P I S+L +L L + H H
Sbjct: 81 L-----YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL------LQGLAFCHSHR-- 127
Query: 643 PIVHCDLKPSNVLLDNDMTAHMGDFGLTR 671
++H DLKP N+L++ + + DFGL R
Sbjct: 128 -VLHRDLKPQNLLINTEGAIKLADFGLAR 155
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 65/143 (45%), Gaps = 11/143 (7%)
Query: 533 VKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACST--- 589
+ Y +LD + + F +Q A +++ E ++ + H+N++ ++ +
Sbjct: 77 IVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLNVFTPQKT 135
Query: 590 -SDFQGNYFRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCD 648
+FQ Y LV E M + L R + + +++LH I+H D
Sbjct: 136 LEEFQDVY---LVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRD 189
Query: 649 LKPSNVLLDNDMTAHMGDFGLTR 671
LKPSN+++ +D T + DFGL R
Sbjct: 190 LKPSNIVVKSDCTLKILDFGLAR 212
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 65/143 (45%), Gaps = 11/143 (7%)
Query: 533 VKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACST--- 589
+ Y +LD + + F +Q A +++ E ++ + H+N++ ++ +
Sbjct: 77 IVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLNVFTPQKT 135
Query: 590 -SDFQGNYFRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCD 648
+FQ Y LV E M + L R + + +++LH I+H D
Sbjct: 136 LEEFQDVY---LVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRD 189
Query: 649 LKPSNVLLDNDMTAHMGDFGLTR 671
LKPSN+++ +D T + DFGL R
Sbjct: 190 LKPSNIVVKSDCTLKILDFGLAR 212
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 64/149 (42%), Gaps = 26/149 (17%)
Query: 535 ATVYKGILDLDQTFIAVKVLFL--HQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
VYK L +A+K + L G + + E L+ + H N+VK++ T +
Sbjct: 17 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 76
Query: 593 QGNYFRALVYEFMHHGSLE----------SCPRILSFLRRLNIAIDVASALEYLHHHCKK 642
LV+EF+H + P I S+L +L L + H H
Sbjct: 77 L-----YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL------LQGLAFCHSHR-- 123
Query: 643 PIVHCDLKPSNVLLDNDMTAHMGDFGLTR 671
++H DLKP N+L++ + + DFGL R
Sbjct: 124 -VLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 65/143 (45%), Gaps = 11/143 (7%)
Query: 533 VKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACST--- 589
+ Y +LD + + F +Q A +++ E ++ + H+N++ ++ +
Sbjct: 39 IVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLNVFTPQKT 97
Query: 590 -SDFQGNYFRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCD 648
+FQ Y LV E M + L R + + +++LH I+H D
Sbjct: 98 LEEFQDVY---LVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRD 151
Query: 649 LKPSNVLLDNDMTAHMGDFGLTR 671
LKPSN+++ +D T + DFGL R
Sbjct: 152 LKPSNIVVKSDCTLKILDFGLAR 174
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 86/206 (41%), Gaps = 50/206 (24%)
Query: 542 LDLDQ----TFIAVKVLFLHQ-RGALKSFMAECQALRNI-RHRNLVKIITACSTSDFQGN 595
LD D+ T +AVK+L L ++E + ++ I +H+N++ ++ AC+ G
Sbjct: 52 LDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD---GP 108
Query: 596 YFRALVYEFMHHGSLESCPRI-------------------LSFLRRLNIAIDVASALEYL 636
+ ++ E+ G+L + LS ++ A VA +EYL
Sbjct: 109 LY--VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL 166
Query: 637 HHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATP 696
K +H DL NVL+ D + DFGL R I + + ++ L V + P
Sbjct: 167 ---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRL--PVKWMAP 221
Query: 697 E---------------YGILLLEIFT 707
E +G+LL EIFT
Sbjct: 222 EALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 64/149 (42%), Gaps = 26/149 (17%)
Query: 535 ATVYKGILDLDQTFIAVKVLFL--HQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
VYK L +A+K + L G + + E L+ + H N+VK++ T +
Sbjct: 16 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 75
Query: 593 QGNYFRALVYEFMHHGSLE----------SCPRILSFLRRLNIAIDVASALEYLHHHCKK 642
LV+EF+H + P I S+L +L L + H H
Sbjct: 76 L-----YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL------LQGLAFCHSHR-- 122
Query: 643 PIVHCDLKPSNVLLDNDMTAHMGDFGLTR 671
++H DLKP N+L++ + + DFGL R
Sbjct: 123 -VLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 65/143 (45%), Gaps = 11/143 (7%)
Query: 533 VKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACST--- 589
+ Y +LD + + F +Q A +++ E ++ + H+N++ ++ +
Sbjct: 40 IVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLNVFTPQKT 98
Query: 590 -SDFQGNYFRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCD 648
+FQ Y LV E M + L R + + +++LH I+H D
Sbjct: 99 LEEFQDVY---LVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRD 152
Query: 649 LKPSNVLLDNDMTAHMGDFGLTR 671
LKPSN+++ +D T + DFGL R
Sbjct: 153 LKPSNIVVKSDCTLKILDFGLAR 175
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 64/149 (42%), Gaps = 26/149 (17%)
Query: 535 ATVYKGILDLDQTFIAVKVLFL--HQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
VYK L +A+K + L G + + E L+ + H N+VK++ T +
Sbjct: 17 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 76
Query: 593 QGNYFRALVYEFMHHGSLE----------SCPRILSFLRRLNIAIDVASALEYLHHHCKK 642
LV+EF+H + P I S+L +L L + H H
Sbjct: 77 L-----YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL------LQGLAFCHSHR-- 123
Query: 643 PIVHCDLKPSNVLLDNDMTAHMGDFGLTR 671
++H DLKP N+L++ + + DFGL R
Sbjct: 124 -VLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 86/206 (41%), Gaps = 50/206 (24%)
Query: 542 LDLDQ----TFIAVKVLFLHQ-RGALKSFMAECQALRNI-RHRNLVKIITACSTSDFQGN 595
LD D+ T +AVK+L L ++E + ++ I +H+N++ ++ AC+ G
Sbjct: 44 LDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD---GP 100
Query: 596 YFRALVYEFMHHGSLESCPRI-------------------LSFLRRLNIAIDVASALEYL 636
+ ++ E+ G+L + LS ++ A VA +EYL
Sbjct: 101 LY--VIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL 158
Query: 637 HHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATP 696
K +H DL NVL+ D + DFGL R I + + ++ L V + P
Sbjct: 159 ---ASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRL--PVKWMAP 213
Query: 697 E---------------YGILLLEIFT 707
E +G+LL EIFT
Sbjct: 214 EALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 66/150 (44%), Gaps = 28/150 (18%)
Query: 535 ATVYKGILDLDQTFIAVKVLFL--HQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
VYK L +A+K + L G + + E L+ + H N+VK++ T +
Sbjct: 20 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 79
Query: 593 QGNYFRALVYEFMHHGSLES-----------CPRILSFLRRLNIAIDVASALEYLHHHCK 641
LV+EF+H L++ P I S+L +L L + H H
Sbjct: 80 L-----YLVFEFLHQ-DLKTFMDASALTGIPLPLIKSYLFQL------LQGLAFCHSHR- 126
Query: 642 KPIVHCDLKPSNVLLDNDMTAHMGDFGLTR 671
++H DLKP N+L++ + + DFGL R
Sbjct: 127 --VLHRDLKPQNLLINTEGAIKLADFGLAR 154
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 64/144 (44%), Gaps = 16/144 (11%)
Query: 535 ATVYKGILDLDQTFIAVKVLFL--HQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
VYK L +A+K + L G + + E L+ + H N+VK++ T +
Sbjct: 20 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 79
Query: 593 QGNYFRAL---VYEFMHHGSLESCPR--ILSFLRRLNIAIDVASALEYLHHHCKKPIVHC 647
F L + +FM +L P I S+L +L L + H H ++H
Sbjct: 80 LYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQL------LQGLAFCHSHR---VLHR 130
Query: 648 DLKPSNVLLDNDMTAHMGDFGLTR 671
DLKP N+L++ + + DFGL R
Sbjct: 131 DLKPENLLINTEGAIKLADFGLAR 154
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 70/173 (40%), Gaps = 26/173 (15%)
Query: 544 LDQTFIAVKVLFLHQRGALKSFMAECQALRNIRH-------------RNLVKIITAC--- 587
LD + A+K + H L + ++E L ++ H RN VK TA
Sbjct: 29 LDSRYYAIKKI-RHTEEKLSTILSEVXLLASLNHQYVVRYYAAWLERRNFVKPXTAVKKK 87
Query: 588 STSDFQGNYFR-ALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVH 646
ST Q Y +Y+ +H +L L R + AL Y+H + I+H
Sbjct: 88 STLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFR-----QILEALSYIH---SQGIIH 139
Query: 647 CDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPEYG 699
+LKP N+ +D +GDFGL + + + + S L G+ T G
Sbjct: 140 RNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIG 192
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 65/143 (45%), Gaps = 11/143 (7%)
Query: 533 VKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACST--- 589
+ Y +LD + + F +Q A +++ E ++ + H+N++ ++ +
Sbjct: 33 IVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIISLLNVFTPQKT 91
Query: 590 -SDFQGNYFRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCD 648
+FQ Y LV E M + L R + + +++LH I+H D
Sbjct: 92 LEEFQDVY---LVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRD 145
Query: 649 LKPSNVLLDNDMTAHMGDFGLTR 671
LKPSN+++ +D T + DFGL R
Sbjct: 146 LKPSNIVVKSDCTLKILDFGLAR 168
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 64/144 (44%), Gaps = 16/144 (11%)
Query: 535 ATVYKGILDLDQTFIAVKVLFL--HQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
VYK L +A+K + L G + + E L+ + H N+VK++ T +
Sbjct: 18 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 77
Query: 593 QGNYFRAL---VYEFMHHGSLESCPR--ILSFLRRLNIAIDVASALEYLHHHCKKPIVHC 647
F L + +FM +L P I S+L +L L + H H ++H
Sbjct: 78 LYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQL------LQGLAFCHSHR---VLHR 128
Query: 648 DLKPSNVLLDNDMTAHMGDFGLTR 671
DLKP N+L++ + + DFGL R
Sbjct: 129 DLKPENLLINTEGAIKLADFGLAR 152
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 64/149 (42%), Gaps = 26/149 (17%)
Query: 535 ATVYKGILDLDQTFIAVKVLFL--HQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
VYK L +A+K + L G + + E L+ + H N+VK++ T +
Sbjct: 18 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 77
Query: 593 QGNYFRALVYEFMHHGSLE----------SCPRILSFLRRLNIAIDVASALEYLHHHCKK 642
LV+EF+H + P I S+L +L L + H H
Sbjct: 78 L-----YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL------LQGLAFCHSHR-- 124
Query: 643 PIVHCDLKPSNVLLDNDMTAHMGDFGLTR 671
++H DLKP N+L++ + + DFGL R
Sbjct: 125 -VLHRDLKPQNLLINTEGAIKLADFGLAR 152
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 79/183 (43%), Gaps = 22/183 (12%)
Query: 550 AVKVL---FLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMH 606
AVKVL + Q ++ M E + L R+ + + C FQ V EF++
Sbjct: 52 AVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCC----FQTPDRLFFVMEFVN 107
Query: 607 HGSLE---SCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAH 663
G L R R A ++ SAL +LH K I++ DLK NVLLD++
Sbjct: 108 GGDLMFHIQKSRRFDEARARFYAAEIISALMFLH---DKGIIYRDLKLDNVLLDHEGHCK 164
Query: 664 MGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPEYGILLLEIFTGKRPTSDMFTEGLDLH 723
+ DFG+ + N ++ GT Y PE +L E+ G P D + G+ L+
Sbjct: 165 LADFGMCK----EGICNGVTTATFCGTPDYIAPE---ILQEMLYG--PAVDWWAMGVLLY 215
Query: 724 NFV 726
+
Sbjct: 216 EML 218
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 45/100 (45%), Gaps = 13/100 (13%)
Query: 603 EFMHHGSLESC-----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD 657
EF G+LE L + L + + ++Y+H K ++H DLKPSN+ L
Sbjct: 114 EFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHS---KKLIHRDLKPSNIFLV 170
Query: 658 NDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE 697
+ +GDFGL + N KGT+ Y +PE
Sbjct: 171 DTKQVKIGDFGLVTSL-----KNDGKRTRSKGTLRYMSPE 205
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 62/140 (44%), Gaps = 25/140 (17%)
Query: 566 MAECQALRNIR-HRNLVKIITACSTSDFQGNYFRALVYEFMHHGSL-----ESCPRILSF 619
+ E LR + H N++++ ++ N F LV++ M G L E
Sbjct: 71 LKEVDILRKVSGHPNIIQL-----KDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKE 125
Query: 620 LRRLNIAI-DVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLT-RFIPEVM 677
R++ A+ +V AL L+ IVH DLKP N+LLD+DM + DFG + + P
Sbjct: 126 TRKIMRALLEVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEK 179
Query: 678 SSNQCSSVGLKGTVGYATPE 697
C GT Y PE
Sbjct: 180 LREVC------GTPSYLAPE 193
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 85/204 (41%), Gaps = 41/204 (20%)
Query: 535 ATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQG 594
+VYK I +A+K + + L+ + E ++ ++VK + G
Sbjct: 43 GSVYKAIHKETGQIVAIKQVPVE--SDLQEIIKEISIMQQCDSPHVVK---------YYG 91
Query: 595 NYFR----ALVYEFMHHGSLESCPRIL-SFLRRLNIAIDVAS---ALEYLHHHCKKPIVH 646
+YF+ +V E+ GS+ R+ L IA + S LEYLH K +H
Sbjct: 92 SYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRK---IH 148
Query: 647 CDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPEY-------- 698
D+K N+LL+ + A + DFG+ + + M+ + GT + PE
Sbjct: 149 RDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNX----VIGTPFWMAPEVIQEIGYNC 204
Query: 699 -------GILLLEIFTGKRPTSDM 715
GI +E+ GK P +D+
Sbjct: 205 VADIWSLGITAIEMAEGKPPYADI 228
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 75/191 (39%), Gaps = 49/191 (25%)
Query: 549 IAVKVLF---LHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYF--RALVY- 602
+A+KVLF + + G E + ++ H N++++ NYF R +Y
Sbjct: 51 VALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLY----------NYFYDRRRIYL 100
Query: 603 --EFMHHGSL-----ESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVL 655
E+ G L +SC R I ++A AL Y H K ++H D+KP N+L
Sbjct: 101 ILEYAPRGELYKELQKSC--TFDEQRTATIMEELADALMYCH---GKKVIHRDIKPENLL 155
Query: 656 LDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPEY---------------GI 700
L + DFG + P + C GT+ Y PE G+
Sbjct: 156 LGLKGELKIADFGWSVHAPSLRRKTMC------GTLDYLPPEMIEGRMHNEKVDLWCIGV 209
Query: 701 LLLEIFTGKRP 711
L E+ G P
Sbjct: 210 LCYELLVGNPP 220
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 59/133 (44%), Gaps = 31/133 (23%)
Query: 600 LVYEFMHHGSL----ESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVL 655
V E+++ G L +SC + R A ++ L++LH K IV+ DLK N+L
Sbjct: 96 FVMEYLNGGDLMYHIQSCHK-FDLSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNIL 151
Query: 656 LDNDMTAHMGDFGLTR--FIPEVMSSNQCSSVGLKGTVGYATPE---------------Y 698
LD D + DFG+ + + + ++ C GT Y PE +
Sbjct: 152 LDKDGHIKIADFGMCKENMLGDAKTNEFC------GTPDYIAPEILLGQKYNHSVDWWSF 205
Query: 699 GILLLEIFTGKRP 711
G+LL E+ G+ P
Sbjct: 206 GVLLYEMLIGQSP 218
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 59/133 (44%), Gaps = 12/133 (9%)
Query: 568 ECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESCPRILSFLRRLNIAI 627
E + R ++H N+V++ + S F LV++ + G L + + +
Sbjct: 53 EARICRLLKHPNIVRLHDSISEEGFH-----YLVFDLVTGGELFEDIVAREYYSEADASH 107
Query: 628 DVASALEYLHHHCKKPIVHCDLKPSNVLLDND---MTAHMGDFGLTRFIPEVMSSNQCSS 684
+ LE ++H IVH DLKP N+LL + + DFGL + +Q +
Sbjct: 108 CIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEV----QGDQQAW 163
Query: 685 VGLKGTVGYATPE 697
G GT GY +PE
Sbjct: 164 FGFAGTPGYLSPE 176
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 68/144 (47%), Gaps = 17/144 (11%)
Query: 535 ATVYKGILDLDQTFIAVKVL---FLHQRGALKSFMAECQALRNIRHRNLVKIITAC---- 587
Y IL+ + +A+K L F +Q A +++ E ++ + H+N++ ++
Sbjct: 41 VAAYDAILERN---VAIKKLSRPFQNQTHAKRAY-RELVLMKVVNHKNIIGLLNVFTPQK 96
Query: 588 STSDFQGNYFRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHC 647
S +FQ Y +V E M + L R + + +++LH I+H
Sbjct: 97 SLEEFQDVY---IVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAG---IIHR 150
Query: 648 DLKPSNVLLDNDMTAHMGDFGLTR 671
DLKPSN+++ +D T + DFGL R
Sbjct: 151 DLKPSNIVVKSDATLKILDFGLAR 174
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 59/133 (44%), Gaps = 31/133 (23%)
Query: 600 LVYEFMHHGSL----ESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVL 655
V E+++ G L +SC + R A ++ L++LH K IV+ DLK N+L
Sbjct: 95 FVMEYLNGGDLMYHIQSCHK-FDLSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNIL 150
Query: 656 LDNDMTAHMGDFGLTR--FIPEVMSSNQCSSVGLKGTVGYATPE---------------Y 698
LD D + DFG+ + + + ++ C GT Y PE +
Sbjct: 151 LDKDGHIKIADFGMCKENMLGDAKTNXFC------GTPDYIAPEILLGQKYNHSVDWWSF 204
Query: 699 GILLLEIFTGKRP 711
G+LL E+ G+ P
Sbjct: 205 GVLLYEMLIGQSP 217
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 69/158 (43%), Gaps = 24/158 (15%)
Query: 550 AVKVLF---LHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMH 606
AVKV+ + Q+ +S + E Q L+ + H N++K+ F+ + LV E
Sbjct: 55 AVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEF-----FEDKGYFYLVGEVYT 109
Query: 607 HGSLES---CPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN---DM 660
G L + S + I V S + Y+H K IVH DLKP N+LL++ D
Sbjct: 110 GGELFDEIISRKRFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDA 166
Query: 661 TAHMGDFGL-TRFIPEVMSSNQCSSVGLKGTVGYATPE 697
+ DFGL T F ++ GT Y PE
Sbjct: 167 NIRIIDFGLSTHFEASKKMKDKI------GTAYYIAPE 198
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 86/219 (39%), Gaps = 41/219 (18%)
Query: 535 ATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRHRNLVKIITACSTSD 591
+V +G+ + + I V + L Q + + M E Q + + + +V++I C
Sbjct: 24 GSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEA 83
Query: 592 FQGNYFRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHC-------KKPI 644
LV E G L FL I V++ E LH +K
Sbjct: 84 LM------LVMEMAGGGPLHK------FLVGKREEIPVSNVAELLHQVSMGMKYLEEKNF 131
Query: 645 VHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE------- 697
VH DL NVLL N A + DFGL++ + S S G K + + PE
Sbjct: 132 VHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAG-KWPLKWYAPECINFRKF 190
Query: 698 --------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVK 727
YG+ + E + G++P M +G ++ F++
Sbjct: 191 SSRSDVWSYGVTMWEALSYGQKPYKKM--KGPEVMAFIE 227
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 69/158 (43%), Gaps = 24/158 (15%)
Query: 550 AVKVLF---LHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMH 606
AVKV+ + Q+ +S + E Q L+ + H N++K+ F+ + LV E
Sbjct: 79 AVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEF-----FEDKGYFYLVGEVYT 133
Query: 607 HGSLES---CPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN---DM 660
G L + S + I V S + Y+H K IVH DLKP N+LL++ D
Sbjct: 134 GGELFDEIISRKRFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDA 190
Query: 661 TAHMGDFGL-TRFIPEVMSSNQCSSVGLKGTVGYATPE 697
+ DFGL T F ++ GT Y PE
Sbjct: 191 NIRIIDFGLSTHFEASKKMKDKI------GTAYYIAPE 222
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 69/158 (43%), Gaps = 24/158 (15%)
Query: 550 AVKVLF---LHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMH 606
AVKV+ + Q+ +S + E Q L+ + H N++K+ F+ + LV E
Sbjct: 78 AVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEF-----FEDKGYFYLVGEVYT 132
Query: 607 HGSLES---CPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN---DM 660
G L + S + I V S + Y+H K IVH DLKP N+LL++ D
Sbjct: 133 GGELFDEIISRKRFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDA 189
Query: 661 TAHMGDFGL-TRFIPEVMSSNQCSSVGLKGTVGYATPE 697
+ DFGL T F ++ GT Y PE
Sbjct: 190 NIRIIDFGLSTHFEASKKMKDKI------GTAYYIAPE 221
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 70/157 (44%), Gaps = 18/157 (11%)
Query: 533 VKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITAC----S 588
+ Y IL+ + + F +Q A +++ E ++ + H+N++ ++ S
Sbjct: 39 IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGLLNVFTPQKS 97
Query: 589 TSDFQGNYFRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCD 648
+FQ Y +V E M + L R + + +++LH I+H D
Sbjct: 98 LEEFQDVY---IVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRD 151
Query: 649 LKPSNVLLDNDMTAHMGDFGLTR-------FIPEVMS 678
LKPSN+++ +D T + DFGL R PEV++
Sbjct: 152 LKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVVT 188
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 59/133 (44%), Gaps = 12/133 (9%)
Query: 568 ECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESCPRILSFLRRLNIAI 627
E + R ++H N+V++ + S F LV++ + G L + + +
Sbjct: 53 EARICRLLKHPNIVRLHDSISEEGFH-----YLVFDLVTGGELFEDIVAREYYSEADASH 107
Query: 628 DVASALEYLHHHCKKPIVHCDLKPSNVLLDND---MTAHMGDFGLTRFIPEVMSSNQCSS 684
+ LE ++H IVH DLKP N+LL + + DFGL + +Q +
Sbjct: 108 CIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEV----QGDQQAW 163
Query: 685 VGLKGTVGYATPE 697
G GT GY +PE
Sbjct: 164 FGFAGTPGYLSPE 176
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 65/147 (44%), Gaps = 26/147 (17%)
Query: 537 VYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIR----------HRNLVKIITA 586
V+K I +AVK +F +F A R R H N+V ++
Sbjct: 25 VWKSIDRRTGEVVAVKKIF-------DAFQNSTDAQRTFREIMILTELSGHENIVNLLNV 77
Query: 587 CSTSDFQGNYFRALVYEFMHHGSLESCPR--ILSFLRRLNIAIDVASALEYLHHHCKKPI 644
+ + Y LV+++M L + R IL + + + + ++YLH +
Sbjct: 78 LRADNDRDVY---LVFDYME-TDLHAVIRANILEPVHKQYVVYQLIKVIKYLH---SGGL 130
Query: 645 VHCDLKPSNVLLDNDMTAHMGDFGLTR 671
+H D+KPSN+LL+ + + DFGL+R
Sbjct: 131 LHRDMKPSNILLNAECHVKVADFGLSR 157
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 94/230 (40%), Gaps = 67/230 (29%)
Query: 528 SYESLVKATVYKGILDLDQTF-IAVKVLFLHQRGALK-SFMAECQALRNI-RHRNLVKII 584
++ +V+AT + G+ D +AVK+L K + M+E + + ++ +H N+V ++
Sbjct: 43 AFGKVVEATAF-GLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLL 101
Query: 585 TACSTSDFQGNYFRALVYEFMHHGSLESCPRILSFLRR---------------------- 622
AC+ G ++ E+ +G L L+FLRR
Sbjct: 102 GACTHG---GPVL--VITEYCCYGDL------LNFLRRKAEAMLGPSLAPGQDPEGLDKE 150
Query: 623 ----------LNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRF 672
L+ + VA + +L K +H D+ NVLL N A +GDFGL R
Sbjct: 151 DGRPLELRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARD 207
Query: 673 IPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT 707
I + SN + V + PE YGILL EIF+
Sbjct: 208 I--MNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 64/144 (44%), Gaps = 16/144 (11%)
Query: 535 ATVYKGILDLDQTFIAVKVLFL--HQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
VYK L +A+K + L G + + E L+ + H N+VK++ T +
Sbjct: 20 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 79
Query: 593 QGNYFRAL---VYEFMHHGSLESCPR--ILSFLRRLNIAIDVASALEYLHHHCKKPIVHC 647
F + + +FM +L P I S+L +L L + H H ++H
Sbjct: 80 LYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQL------LQGLAFCHSHR---VLHR 130
Query: 648 DLKPSNVLLDNDMTAHMGDFGLTR 671
DLKP N+L++ + + DFGL R
Sbjct: 131 DLKPQNLLINTEGAIKLADFGLAR 154
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 65/143 (45%), Gaps = 11/143 (7%)
Query: 533 VKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITAC----S 588
+ Y IL+ + + F +Q A +++ E ++ + H+N++ ++ S
Sbjct: 41 IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGLLNVFTPQKS 99
Query: 589 TSDFQGNYFRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCD 648
+FQ Y +V E M + L R + + +++LH I+H D
Sbjct: 100 LEEFQDVY---IVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRD 153
Query: 649 LKPSNVLLDNDMTAHMGDFGLTR 671
LKPSN+++ +D T + DFGL R
Sbjct: 154 LKPSNIVVKSDCTLKILDFGLAR 176
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 21/107 (19%)
Query: 621 RRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSN 680
R + + D AL + H + I+H D+KP+N+++ + DFG+ R I + S N
Sbjct: 117 RAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIAD--SGN 171
Query: 681 QCS-SVGLKGTVGYATPEY---------------GILLLEIFTGKRP 711
+ + + GT Y +PE G +L E+ TG+ P
Sbjct: 172 SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 72/161 (44%), Gaps = 19/161 (11%)
Query: 549 IAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKII-----TACSTSDFQGNYFR----A 599
+A+K + L ++K + E + +R + H N+VK+ + +D G+
Sbjct: 39 VAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVY 98
Query: 600 LVYEFMH---HGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLL 656
+V E+M LE P + R + L+Y+H ++H DLKP+N+ +
Sbjct: 99 IVQEYMETDLANVLEQGPLLEEHARLF--MYQLLRGLKYIH---SANVLHRDLKPANLFI 153
Query: 657 D-NDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATP 696
+ D+ +GDFGL R + S S GL T Y +P
Sbjct: 154 NTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLV-TKWYRSP 193
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 61/158 (38%), Gaps = 25/158 (15%)
Query: 549 IAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHG 608
A K + ++ E Q + +RH LV + A F+ + ++YEFM G
Sbjct: 185 FAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDA-----FEDDNEMVMIYEFMSGG 239
Query: 609 SLESCPRILSFLRRLNIAIDVASALEYLHHHCK-------KPIVHCDLKPSNVLLDNDMT 661
L + + + A+EY+ CK VH DLKP N++ +
Sbjct: 240 EL------FEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRS 293
Query: 662 AHMG--DFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE 697
+ DFGLT + S + GT +A PE
Sbjct: 294 NELKLIDFGLTAHLDPKQSVKVTT-----GTAEFAAPE 326
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 63/130 (48%), Gaps = 14/130 (10%)
Query: 549 IAVKVL---FLHQRGALKSFMAECQALRNIRHRNLVKIITACST----SDFQGNYFRALV 601
+AVK L F +Q A +++ E L+ + H+N++ ++ + +FQ Y LV
Sbjct: 52 VAVKKLSRPFQNQTHAKRAY-RELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVY---LV 107
Query: 602 YEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMT 661
E M + L R + + +++LH I+H DLKPSN+++ +D T
Sbjct: 108 MELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCT 164
Query: 662 AHMGDFGLTR 671
+ DFGL R
Sbjct: 165 LKILDFGLAR 174
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 63/130 (48%), Gaps = 14/130 (10%)
Query: 549 IAVKVL---FLHQRGALKSFMAECQALRNIRHRNLVKIITACST----SDFQGNYFRALV 601
+AVK L F +Q A +++ E L+ + H+N++ ++ + +FQ Y LV
Sbjct: 50 VAVKKLSRPFQNQTHAKRAY-RELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVY---LV 105
Query: 602 YEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMT 661
E M + L R + + +++LH I+H DLKPSN+++ +D T
Sbjct: 106 MELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCT 162
Query: 662 AHMGDFGLTR 671
+ DFGL R
Sbjct: 163 LKILDFGLAR 172
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 17/143 (11%)
Query: 536 TVYKGILDLDQTFIAVKVL---FLHQRGALKSFMAECQALRNIRHRNLVKIITAC----S 588
Y IL+ + +A+K L F +Q A +++ E ++ + H+N++ ++ S
Sbjct: 42 AAYDAILERN---VAIKKLSRPFQNQTHAKRAY-RELVLMKVVNHKNIIGLLNVFTPQKS 97
Query: 589 TSDFQGNYFRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCD 648
+FQ Y +V E M + L R + + +++LH I+H D
Sbjct: 98 LEEFQDVY---IVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAG---IIHRD 151
Query: 649 LKPSNVLLDNDMTAHMGDFGLTR 671
LKPSN+++ +D T + DFGL R
Sbjct: 152 LKPSNIVVKSDATLKILDFGLAR 174
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 61/158 (38%), Gaps = 25/158 (15%)
Query: 549 IAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHG 608
A K + ++ E Q + +RH LV + A F+ + ++YEFM G
Sbjct: 79 FAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDA-----FEDDNEMVMIYEFMSGG 133
Query: 609 SLESCPRILSFLRRLNIAIDVASALEYLHHHCK-------KPIVHCDLKPSNVLLDNDMT 661
L + + + A+EY+ CK VH DLKP N++ +
Sbjct: 134 EL------FEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRS 187
Query: 662 AHMG--DFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE 697
+ DFGLT + S + GT +A PE
Sbjct: 188 NELKLIDFGLTAHLDPKQSVKVTT-----GTAEFAAPE 220
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 21/107 (19%)
Query: 621 RRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSN 680
R + + D AL + H + I+H D+KP+N+++ + DFG+ R I + S N
Sbjct: 117 RAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIAD--SGN 171
Query: 681 QCS-SVGLKGTVGYATPEY---------------GILLLEIFTGKRP 711
+ + + GT Y +PE G +L E+ TG+ P
Sbjct: 172 SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 21/107 (19%)
Query: 621 RRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSN 680
R + + D AL + H + I+H D+KP+N+++ + DFG+ R I + S N
Sbjct: 117 RAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIAD--SGN 171
Query: 681 QCS-SVGLKGTVGYATPEY---------------GILLLEIFTGKRP 711
+ + + GT Y +PE G +L E+ TG+ P
Sbjct: 172 SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 70/161 (43%), Gaps = 30/161 (18%)
Query: 549 IAVKVL------FLHQRGALKSFMAECQALRNIRHRNLVKIIT----ACSTSDFQGNYFR 598
+AVK L +H R + E + L++++H N++ ++ A S DF Y
Sbjct: 56 VAVKKLSRPFQSLIHARRTYR----ELRLLKHLKHENVIGLLDVFTPATSIEDFSEVY-- 109
Query: 599 ALVYEFMHHG--SLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLL 656
LV M ++ C + LS + + L+Y+H I+H DLKPSNV +
Sbjct: 110 -LVTTLMGADLNNIVKC-QALSDEHVQFLVYQLLRGLKYIH---SAGIIHRDLKPSNVAV 164
Query: 657 DNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE 697
+ D + DFGL R E M+ G T Y PE
Sbjct: 165 NEDSELRILDFGLARQADEEMT-------GYVATRWYRAPE 198
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 68/143 (47%), Gaps = 17/143 (11%)
Query: 536 TVYKGILDLDQTFIAVKVL---FLHQRGALKSFMAECQALRNIRHRNLVKIITAC----S 588
Y IL+ + +A+K L F +Q A +++ E ++ + H+N++ ++ S
Sbjct: 42 AAYDAILERN---VAIKKLSRPFQNQTHAKRAY-RELVLMKVVNHKNIIGLLNVFTPQKS 97
Query: 589 TSDFQGNYFRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCD 648
+FQ Y +V E M + L R + + +++LH I+H D
Sbjct: 98 LEEFQDVY---IVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAG---IIHRD 151
Query: 649 LKPSNVLLDNDMTAHMGDFGLTR 671
LKPSN+++ +D T + DFGL R
Sbjct: 152 LKPSNIVVKSDATLKILDFGLAR 174
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 65/143 (45%), Gaps = 11/143 (7%)
Query: 533 VKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITAC----S 588
+ Y IL+ + + F +Q A +++ E ++ + H+N++ ++ S
Sbjct: 39 IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGLLNVFTPQKS 97
Query: 589 TSDFQGNYFRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCD 648
+FQ Y +V E M + L R + + +++LH I+H D
Sbjct: 98 LEEFQDVY---IVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRD 151
Query: 649 LKPSNVLLDNDMTAHMGDFGLTR 671
LKPSN+++ +D T + DFGL R
Sbjct: 152 LKPSNIVVKSDCTLKILDFGLAR 174
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 65/143 (45%), Gaps = 11/143 (7%)
Query: 533 VKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITAC----S 588
+ Y IL+ + + F +Q A +++ E ++ + H+N++ ++ S
Sbjct: 39 IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGLLNVFTPQKS 97
Query: 589 TSDFQGNYFRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCD 648
+FQ Y +V E M + L R + + +++LH I+H D
Sbjct: 98 LEEFQDVY---IVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRD 151
Query: 649 LKPSNVLLDNDMTAHMGDFGLTR 671
LKPSN+++ +D T + DFGL R
Sbjct: 152 LKPSNIVVKSDCTLKILDFGLAR 174
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 65/143 (45%), Gaps = 11/143 (7%)
Query: 533 VKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITAC----S 588
+ Y IL+ + + F +Q A +++ E ++ + H+N++ ++ S
Sbjct: 40 IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGLLNVFTPQKS 98
Query: 589 TSDFQGNYFRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCD 648
+FQ Y +V E M + L R + + +++LH I+H D
Sbjct: 99 LEEFQDVY---IVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRD 152
Query: 649 LKPSNVLLDNDMTAHMGDFGLTR 671
LKPSN+++ +D T + DFGL R
Sbjct: 153 LKPSNIVVKSDCTLKILDFGLAR 175
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 69/158 (43%), Gaps = 24/158 (15%)
Query: 550 AVKVLF---LHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMH 606
AVKV+ + Q+ +S + E Q L+ + H N++K+ F+ + LV E
Sbjct: 61 AVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEF-----FEDKGYFYLVGEVYT 115
Query: 607 HGSLES---CPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN---DM 660
G L + S + I V S + Y+H K IVH DLKP N+LL++ D
Sbjct: 116 GGELFDEIISRKRFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDA 172
Query: 661 TAHMGDFGL-TRFIPEVMSSNQCSSVGLKGTVGYATPE 697
+ DFGL T F ++ GT Y PE
Sbjct: 173 NIRIIDFGLSTHFEASKKMKDKI------GTAYYIAPE 204
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 21/107 (19%)
Query: 621 RRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSN 680
R + + D AL + H + I+H D+KP+N+++ + DFG+ R I + S N
Sbjct: 117 RAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIAD--SGN 171
Query: 681 QCS-SVGLKGTVGYATPEY---------------GILLLEIFTGKRP 711
+ + + GT Y +PE G +L E+ TG+ P
Sbjct: 172 SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 65/143 (45%), Gaps = 11/143 (7%)
Query: 533 VKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITAC----S 588
+ Y IL+ + + F +Q A +++ E ++ + H+N++ ++ S
Sbjct: 44 IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGLLNVFTPQKS 102
Query: 589 TSDFQGNYFRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCD 648
+FQ Y +V E M + L R + + +++LH I+H D
Sbjct: 103 LEEFQDVY---IVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRD 156
Query: 649 LKPSNVLLDNDMTAHMGDFGLTR 671
LKPSN+++ +D T + DFGL R
Sbjct: 157 LKPSNIVVKSDCTLKILDFGLAR 179
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 74/197 (37%), Gaps = 32/197 (16%)
Query: 533 VKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
V+ Y + D +AVK L + F E Q L+ + +VK S
Sbjct: 23 VELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR---GVSYG 79
Query: 593 QGNYFRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCK-------KPIV 645
G LV E++ G L FL+R +D + L Y CK + V
Sbjct: 80 PGRPELRLVMEYLPSGCLRD------FLQRHRARLDASRLLLYSSQICKGMEYLGSRRCV 133
Query: 646 HCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE-------- 697
H DL N+L++++ + DFGL + +P G YA PE
Sbjct: 134 HRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYA-PESLSDNIFS 192
Query: 698 -------YGILLLEIFT 707
+G++L E+FT
Sbjct: 193 RQSDVWSFGVVLYELFT 209
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 65/143 (45%), Gaps = 11/143 (7%)
Query: 533 VKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITAC----S 588
+ Y IL+ + + F +Q A +++ E ++ + H+N++ ++ S
Sbjct: 39 IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGLLNVFTPQKS 97
Query: 589 TSDFQGNYFRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCD 648
+FQ Y +V E M + L R + + +++LH I+H D
Sbjct: 98 LEEFQDVY---IVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRD 151
Query: 649 LKPSNVLLDNDMTAHMGDFGLTR 671
LKPSN+++ +D T + DFGL R
Sbjct: 152 LKPSNIVVKSDCTLKILDFGLAR 174
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 21/107 (19%)
Query: 621 RRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSN 680
R + + D AL + H + I+H D+KP+N+L+ + DFG+ R I + S N
Sbjct: 117 RAIEVIADACQALNFSHQNG---IIHRDVKPANILISATNAVKVVDFGIARAIAD--SGN 171
Query: 681 QC-SSVGLKGTVGYATPEY---------------GILLLEIFTGKRP 711
+ + GT Y +PE G +L E+ TG+ P
Sbjct: 172 SVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 64/140 (45%), Gaps = 11/140 (7%)
Query: 536 TVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITAC----STSD 591
Y IL+ + + F +Q A +++ E ++ + H+N++ ++ S +
Sbjct: 42 AAYDAILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKVVNHKNIIGLLNVFTPQKSLEE 100
Query: 592 FQGNYFRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKP 651
FQ Y +V E M + L R + + +++LH I+H DLKP
Sbjct: 101 FQDVY---IVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKP 154
Query: 652 SNVLLDNDMTAHMGDFGLTR 671
SN+++ +D T + DFGL R
Sbjct: 155 SNIVVKSDATLKILDFGLAR 174
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 12/133 (9%)
Query: 568 ECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESCPRILSFLRRLNIAI 627
E + R ++H N+V++ + S +G+++ L+++ + G L + + +
Sbjct: 71 EARICRLLKHPNIVRLHDSISE---EGHHY--LIFDLVTGGELFEDIVAREYYSEADASH 125
Query: 628 DVASALEYLHHHCKKPIVHCDLKPSNVLLDNDM---TAHMGDFGLTRFIPEVMSSNQCSS 684
+ LE + H + +VH DLKP N+LL + + + DFGL EV Q +
Sbjct: 126 CIQQILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLA---IEVEGEQQ-AW 181
Query: 685 VGLKGTVGYATPE 697
G GT GY +PE
Sbjct: 182 FGFAGTPGYLSPE 194
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 49/107 (45%), Gaps = 21/107 (19%)
Query: 621 RRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSN 680
R + + D AL + H + I+H D+KP+N+++ + DFG+ R I + S N
Sbjct: 134 RAIEVIADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIAD--SGN 188
Query: 681 QCS-SVGLKGTVGYATPEY---------------GILLLEIFTGKRP 711
+ + + GT Y +PE G +L E+ TG+ P
Sbjct: 189 SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 235
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 65/143 (45%), Gaps = 11/143 (7%)
Query: 533 VKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITAC----S 588
+ Y IL+ + + F +Q A +++ E ++ + H+N++ ++ S
Sbjct: 33 IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGLLNVFTPQKS 91
Query: 589 TSDFQGNYFRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCD 648
+FQ Y +V E M + L R + + +++LH I+H D
Sbjct: 92 LEEFQDVY---IVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRD 145
Query: 649 LKPSNVLLDNDMTAHMGDFGLTR 671
LKPSN+++ +D T + DFGL R
Sbjct: 146 LKPSNIVVKSDCTLKILDFGLAR 168
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 65/143 (45%), Gaps = 11/143 (7%)
Query: 533 VKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITAC----S 588
+ Y IL+ + + F +Q A +++ E ++ + H+N++ ++ S
Sbjct: 39 IVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGLLNVFTPQKS 97
Query: 589 TSDFQGNYFRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCD 648
+FQ Y +V E M + L R + + +++LH I+H D
Sbjct: 98 LEEFQDVY---IVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRD 151
Query: 649 LKPSNVLLDNDMTAHMGDFGLTR 671
LKPSN+++ +D T + DFGL R
Sbjct: 152 LKPSNIVVKSDCTLKILDFGLAR 174
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 65/146 (44%), Gaps = 15/146 (10%)
Query: 561 ALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMH---HGSLESCPRIL 617
AL++ + E + L++ +H N++ I F+ ++ E M H + + ++L
Sbjct: 53 ALRT-LREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVIST--QML 109
Query: 618 SFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVM 677
S A++ LH ++H DLKPSN+L++++ + DFGL R I E
Sbjct: 110 SDDHIQYFIYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESA 166
Query: 678 SSN------QCSSVGLKGTVGYATPE 697
+ N Q V T Y PE
Sbjct: 167 ADNSEPTGQQSGMVEFVATRWYRAPE 192
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 64/140 (45%), Gaps = 11/140 (7%)
Query: 536 TVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITAC----STSD 591
Y IL+ + + F +Q A +++ E ++ + H+N++ ++ S +
Sbjct: 42 AAYDAILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGLLNVFTPQKSLEE 100
Query: 592 FQGNYFRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKP 651
FQ Y +V E M + L R + + +++LH I+H DLKP
Sbjct: 101 FQDVY---IVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKP 154
Query: 652 SNVLLDNDMTAHMGDFGLTR 671
SN+++ +D T + DFGL R
Sbjct: 155 SNIVVKSDATLKILDFGLAR 174
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 70/161 (43%), Gaps = 30/161 (18%)
Query: 549 IAVKVL------FLHQRGALKSFMAECQALRNIRHRNLVKIIT----ACSTSDFQGNYFR 598
+AVK L +H R + E + L++++H N++ ++ A S DF Y
Sbjct: 48 VAVKKLSRPFQSLIHARRTYR----ELRLLKHLKHENVIGLLDVFTPATSIEDFSEVY-- 101
Query: 599 ALVYEFMHHG--SLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLL 656
LV M ++ C + LS + + L+Y+H I+H DLKPSNV +
Sbjct: 102 -LVTTLMGADLNNIVKC-QALSDEHVQFLVYQLLRGLKYIH---SAGIIHRDLKPSNVAV 156
Query: 657 DNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE 697
+ D + DFGL R E M+ G T Y PE
Sbjct: 157 NEDCELRILDFGLARQADEEMT-------GYVATRWYRAPE 190
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 59/133 (44%), Gaps = 12/133 (9%)
Query: 568 ECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESCPRILSFLRRLNIAI 627
E + R ++H N+V++ + S F LV++ + G L + + +
Sbjct: 53 EARICRLLKHSNIVRLHDSISEEGFH-----YLVFDLVTGGELFEDIVAREYYSEADASH 107
Query: 628 DVASALEYLHHHCKKPIVHCDLKPSNVLLDND---MTAHMGDFGLTRFIPEVMSSNQCSS 684
+ LE + H + +VH DLKP N+LL + + DFGL EV Q +
Sbjct: 108 CIQQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLA---IEVQGDQQ-AW 163
Query: 685 VGLKGTVGYATPE 697
G GT GY +PE
Sbjct: 164 FGFAGTPGYLSPE 176
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 73/169 (43%), Gaps = 29/169 (17%)
Query: 563 KSFMAECQALRNIRHRNLVKIITACSTS----DFQGNY-----FRALVYEFMHHGSLESC 613
K + E + L++ +H N++ I + +F+ Y + +++ +H +
Sbjct: 98 KRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTL 157
Query: 614 PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673
+ FL +L L+Y+H ++H DLKPSN+L++ + +GDFG+ R +
Sbjct: 158 EHVRYFLYQL------LRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGL 208
Query: 674 PEVMSSNQCSSVGLKGTVGYATPEYGILLLEIFTGKRPTSDMFTEGLDL 722
+ +Q T Y PE + L E +T+ +DL
Sbjct: 209 CTSPAEHQYFMTEYVATRWYRAPELMLSLHE-----------YTQAIDL 246
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 67/158 (42%), Gaps = 24/158 (15%)
Query: 550 AVKVLF---LHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMH 606
AVKV+ + Q+ +S + E Q L+ + H N+ K+ F+ + LV E
Sbjct: 55 AVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLYEF-----FEDKGYFYLVGEVYT 109
Query: 607 HGSLES---CPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN---DM 660
G L + S + I V S + Y H K IVH DLKP N+LL++ D
Sbjct: 110 GGELFDEIISRKRFSEVDAARIIRQVLSGITYXH---KNKIVHRDLKPENLLLESKSKDA 166
Query: 661 TAHMGDFGL-TRFIPEVMSSNQCSSVGLKGTVGYATPE 697
+ DFGL T F ++ GT Y PE
Sbjct: 167 NIRIIDFGLSTHFEASKKXKDKI------GTAYYIAPE 198
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 65/139 (46%), Gaps = 16/139 (11%)
Query: 563 KSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESCPRILSFLRR 622
+ F+ E +R H ++VK+I + + ++ E G L S ++ F
Sbjct: 56 EKFLQEALTMRQFDHPHIVKLIGVITENPVW------IIMELCTLGELRSFLQVRKFSLD 109
Query: 623 LN----IAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMS 678
L A +++AL YL K VH D+ NVL+ ++ +GDFGL+R++ + S
Sbjct: 110 LASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED--S 164
Query: 679 SNQCSSVGLKGTVGYATPE 697
+ +S G K + + PE
Sbjct: 165 TXXKASKG-KLPIKWMAPE 182
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 81/193 (41%), Gaps = 40/193 (20%)
Query: 549 IAVKVLFLHQRGALKS--FMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMH 606
I VKVL + KS F EC LR H N++ ++ AC + L+ +M
Sbjct: 36 IVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHP---TLITHWMP 92
Query: 607 HGSL-----ESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIV-HCDLKPSNVLLDNDM 660
+GSL E ++ + + A+D+A + +L H +P++ L +V++D DM
Sbjct: 93 YGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFL--HTLEPLIPRHALNSRSVMIDEDM 150
Query: 661 TAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE------------------YGILL 702
TA + + +V S Q S G + PE + +LL
Sbjct: 151 TARIS-------MADVKFSFQ--SPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLL 201
Query: 703 LEIFTGKRPTSDM 715
E+ T + P +D+
Sbjct: 202 WELVTREVPFADL 214
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 64/140 (45%), Gaps = 11/140 (7%)
Query: 536 TVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITAC----STSD 591
Y IL+ + + F +Q A +++ E ++ + H+N++ ++ S +
Sbjct: 42 AAYDAILERNVAIKKLSRPFQNQTHAKRAY-RELVLMKCVNHKNIIGLLNVFTPQKSLEE 100
Query: 592 FQGNYFRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKP 651
FQ Y +V E M + L R + + +++LH I+H DLKP
Sbjct: 101 FQDVY---IVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKP 154
Query: 652 SNVLLDNDMTAHMGDFGLTR 671
SN+++ +D T + DFGL R
Sbjct: 155 SNIVVKSDCTLKILDFGLAR 174
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 63/149 (42%), Gaps = 26/149 (17%)
Query: 535 ATVYKGILDLDQTFIAVKVLFL--HQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
VYK L +A+ + L G + + E L+ + H N+VK++ T +
Sbjct: 17 GVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 76
Query: 593 QGNYFRALVYEFMHHGSLE----------SCPRILSFLRRLNIAIDVASALEYLHHHCKK 642
LV+EF+H + P I S+L +L L + H H
Sbjct: 77 L-----YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL------LQGLAFCHSHR-- 123
Query: 643 PIVHCDLKPSNVLLDNDMTAHMGDFGLTR 671
++H DLKP N+L++ + + DFGL R
Sbjct: 124 -VLHRDLKPQNLLINTEGAIKLADFGLAR 151
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 63/149 (42%), Gaps = 26/149 (17%)
Query: 535 ATVYKGILDLDQTFIAVKVLFL--HQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
VYK L +A+ + L G + + E L+ + H N+VK++ T +
Sbjct: 16 GVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 75
Query: 593 QGNYFRALVYEFMHHGSLE----------SCPRILSFLRRLNIAIDVASALEYLHHHCKK 642
LV+EF+H + P I S+L +L L + H H
Sbjct: 76 L-----YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQL------LQGLAFCHSHR-- 122
Query: 643 PIVHCDLKPSNVLLDNDMTAHMGDFGLTR 671
++H DLKP N+L++ + + DFGL R
Sbjct: 123 -VLHRDLKPQNLLINTEGAIKLADFGLAR 150
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 55/117 (47%), Gaps = 13/117 (11%)
Query: 563 KSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESCPRILSFLRR 622
+ F+ E +R H ++VK+I + + ++ E G L S ++ F
Sbjct: 436 EKFLQEALTMRQFDHPHIVKLIGVITENPVW------IIMELCTLGELRSFLQVRKFSLD 489
Query: 623 LN----IAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPE 675
L A +++AL YL K VH D+ NVL+ ++ +GDFGL+R++ +
Sbjct: 490 LASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMED 543
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 64/154 (41%), Gaps = 30/154 (19%)
Query: 535 ATVYKGILDLDQTFIAVKVLFLHQRGAL-----KSFMAECQALRNIRHRNLVKIITACST 589
TVYKG+ + + + V + R A K + E + ++ + ++ +++ C T
Sbjct: 63 GTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT 122
Query: 590 SDFQGNYFRALVYEFMHHGSLESCPRILSFLRR----------LNIAIDVASALEYLHHH 639
S Q L+ + M G L L ++R LN + +A + YL
Sbjct: 123 STVQ------LITQLMPFGCL------LDYVREHKDNIGSQYLLNWCVQIAKGMNYLE-- 168
Query: 640 CKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673
+ +VH DL NVL+ + DFGL + +
Sbjct: 169 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 201
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 93/223 (41%), Gaps = 44/223 (19%)
Query: 537 VYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACST---SDFQ 593
V+KGI + Q +A+K++ L + + + +++ C + + +
Sbjct: 23 VFKGIDNRTQKVVAIKIIDLEE-----------AEDEIEDIQQEITVLSQCDSPYVTKYY 71
Query: 594 GNYFRA----LVYEFMHHGS----LESCP----RILSFLRRLNIAIDVASALEYLHHHCK 641
G+Y + ++ E++ GS LE P +I + LR ++ L+YLH K
Sbjct: 72 GSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILR------EILKGLDYLHSEKK 125
Query: 642 KPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPEYGIL 701
+H D+K +NVLL + DFG + ++ Q GT + PE ++
Sbjct: 126 ---IHRDIKAANVLLSEHGEVKLADFG----VAGQLTDTQIKRNTFVGTPFWMAPE--VI 176
Query: 702 LLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFLV 744
+ K +D+++ G+ + P L + LFL+
Sbjct: 177 KQSAYDSK---ADIWSLGITAIELARGEPPHSELHPMKVLFLI 216
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 74/197 (37%), Gaps = 32/197 (16%)
Query: 533 VKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
V+ Y + D +AVK L + F E Q L+ + +VK S
Sbjct: 26 VELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR---GVSYG 82
Query: 593 QGNYFRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCK-------KPIV 645
G LV E++ G L FL+R +D + L Y CK + V
Sbjct: 83 PGRQSLRLVMEYLPSGCLRD------FLQRHRARLDASRLLLYSSQICKGMEYLGSRRCV 136
Query: 646 HCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE-------- 697
H DL N+L++++ + DFGL + +P G YA PE
Sbjct: 137 HRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYA-PESLSDNIFS 195
Query: 698 -------YGILLLEIFT 707
+G++L E+FT
Sbjct: 196 RQSDVWSFGVVLYELFT 212
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 93/223 (41%), Gaps = 44/223 (19%)
Query: 537 VYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACST---SDFQ 593
V+KGI + Q +A+K++ L E + + +++ C + + +
Sbjct: 38 VFKGIDNRTQKVVAIKIIDL-----------EEAEDEIEDIQQEITVLSQCDSPYVTKYY 86
Query: 594 GNYFRA----LVYEFMHHGS----LESCP----RILSFLRRLNIAIDVASALEYLHHHCK 641
G+Y + ++ E++ GS LE P +I + LR ++ L+YLH K
Sbjct: 87 GSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILR------EILKGLDYLHSEKK 140
Query: 642 KPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPEYGIL 701
+H D+K +NVLL + DFG + ++ Q GT + PE ++
Sbjct: 141 ---IHRDIKAANVLLSEHGEVKLADFG----VAGQLTDTQIKRNXFVGTPFWMAPE--VI 191
Query: 702 LLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFLV 744
+ K +D+++ G+ + P L + LFL+
Sbjct: 192 KQSAYDSK---ADIWSLGITAIELARGEPPHSELHPMKVLFLI 231
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 74/197 (37%), Gaps = 32/197 (16%)
Query: 533 VKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
V+ Y + D +AVK L + F E Q L+ + +VK S
Sbjct: 27 VELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR---GVSYG 83
Query: 593 QGNYFRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCK-------KPIV 645
G LV E++ G L FL+R +D + L Y CK + V
Sbjct: 84 PGRQSLRLVMEYLPSGCLRD------FLQRHRARLDASRLLLYSSQICKGMEYLGSRRCV 137
Query: 646 HCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE-------- 697
H DL N+L++++ + DFGL + +P G YA PE
Sbjct: 138 HRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYA-PESLSDNIFS 196
Query: 698 -------YGILLLEIFT 707
+G++L E+FT
Sbjct: 197 RQSDVWSFGVVLYELFT 213
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 79/189 (41%), Gaps = 41/189 (21%)
Query: 520 RKDLLLNVS-----YESLVKATVYKGILDLDQTFIAVKVLFLHQR-GALKSFMAECQALR 573
RK+L+L + + +VKAT + T +AVK+L + L+ ++E L+
Sbjct: 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLK 81
Query: 574 NIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESC-------------------- 613
+ H +++K+ ACS G L+ E+ +GSL
Sbjct: 82 QVNHPHVIKLYGACSQD---GPLL--LIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNS 136
Query: 614 -------PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGD 666
R L+ ++ A ++ ++YL + +VH DL N+L+ + D
Sbjct: 137 SSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISD 193
Query: 667 FGLTRFIPE 675
FGL+R + E
Sbjct: 194 FGLSRDVYE 202
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 61/144 (42%), Gaps = 35/144 (24%)
Query: 568 ECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESCPRILSFLRRLNIA- 626
E L N++H N+V+ F+ N +V ++ G L +R+N
Sbjct: 73 EVAVLANMKHPNIVQY-----RESFEENGSLYIVMDYCEGGDL---------FKRINAQK 118
Query: 627 -------------IDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673
+ + AL+++H + I+H D+K N+ L D T +GDFG+ R
Sbjct: 119 GVLFQEDQILDWFVQICLALKHVHD---RKILHRDIKSQNIFLTKDGTVQLGDFGIAR-- 173
Query: 674 PEVMSSNQCSSVGLKGTVGYATPE 697
V++S + GT Y +PE
Sbjct: 174 --VLNSTVELARACIGTPYYLSPE 195
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 93/223 (41%), Gaps = 44/223 (19%)
Query: 537 VYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACST---SDFQ 593
V+KGI + Q +A+K++ L + + + +++ C + + +
Sbjct: 23 VFKGIDNRTQKVVAIKIIDLEE-----------AEDEIEDIQQEITVLSQCDSPYVTKYY 71
Query: 594 GNYFRA----LVYEFMHHGS----LESCP----RILSFLRRLNIAIDVASALEYLHHHCK 641
G+Y + ++ E++ GS LE P +I + LR ++ L+YLH K
Sbjct: 72 GSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILR------EILKGLDYLHSEKK 125
Query: 642 KPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPEYGIL 701
+H D+K +NVLL + DFG + ++ Q GT + PE ++
Sbjct: 126 ---IHRDIKAANVLLSEHGEVKLADFG----VAGQLTDTQIKRNXFVGTPFWMAPE--VI 176
Query: 702 LLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFLV 744
+ K +D+++ G+ + P L + LFL+
Sbjct: 177 KQSAYDSK---ADIWSLGITAIELARGEPPHSELHPMKVLFLI 216
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 79/189 (41%), Gaps = 41/189 (21%)
Query: 520 RKDLLLNVS-----YESLVKATVYKGILDLDQTFIAVKVLFLHQR-GALKSFMAECQALR 573
RK+L+L + + +VKAT + T +AVK+L + L+ ++E L+
Sbjct: 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLK 81
Query: 574 NIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESC-------------------- 613
+ H +++K+ ACS G L+ E+ +GSL
Sbjct: 82 QVNHPHVIKLYGACSQD---GPLL--LIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNS 136
Query: 614 -------PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGD 666
R L+ ++ A ++ ++YL + +VH DL N+L+ + D
Sbjct: 137 SSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISD 193
Query: 667 FGLTRFIPE 675
FGL+R + E
Sbjct: 194 FGLSRDVYE 202
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 79/189 (41%), Gaps = 41/189 (21%)
Query: 520 RKDLLLNVS-----YESLVKATVYKGILDLDQTFIAVKVLFLHQR-GALKSFMAECQALR 573
RK+L+L + + +VKAT + T +AVK+L + L+ ++E L+
Sbjct: 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLK 81
Query: 574 NIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESC-------------------- 613
+ H +++K+ ACS G L+ E+ +GSL
Sbjct: 82 QVNHPHVIKLYGACSQD---GPLL--LIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNS 136
Query: 614 -------PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGD 666
R L+ ++ A ++ ++YL + +VH DL N+L+ + D
Sbjct: 137 SSLDHPDERALTMGDLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGRKMKISD 193
Query: 667 FGLTRFIPE 675
FGL+R + E
Sbjct: 194 FGLSRDVYE 202
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 79/183 (43%), Gaps = 35/183 (19%)
Query: 549 IAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHG 608
+AVK + L ++ + E +R+ H N+V + ++ D +V EF+ G
Sbjct: 73 VAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELW-----VVMEFLEGG 127
Query: 609 SLESCPRILSFLRR-----LNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAH 663
+L I++ R + + V AL YLH+ + ++H D+K ++LL +D
Sbjct: 128 ALTD---IVTHTRMNEEQIATVCLSVLRALSYLHN---QGVIHRDIKSDSILLTSDGRIK 181
Query: 664 MGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPEY---------------GILLLEIFTG 708
+ DFG F +V S L GT + PE GI+++E+ G
Sbjct: 182 LSDFG---FCAQV-SKEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDG 237
Query: 709 KRP 711
+ P
Sbjct: 238 EPP 240
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 74/197 (37%), Gaps = 32/197 (16%)
Query: 533 VKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
V+ Y + D +AVK L + F E Q L+ + +VK S
Sbjct: 39 VELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR---GVSYG 95
Query: 593 QGNYFRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCK-------KPIV 645
G LV E++ G L FL+R +D + L Y CK + V
Sbjct: 96 PGRQSLRLVMEYLPSGCLRD------FLQRHRARLDASRLLLYSSQICKGMEYLGSRRCV 149
Query: 646 HCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE-------- 697
H DL N+L++++ + DFGL + +P G YA PE
Sbjct: 150 HRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYA-PESLSDNIFS 208
Query: 698 -------YGILLLEIFT 707
+G++L E+FT
Sbjct: 209 RQSDVWSFGVVLYELFT 225
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 69/159 (43%), Gaps = 26/159 (16%)
Query: 549 IAVKVL------FLHQRGALKSFMAECQALRNIRHRNLVKIIT----ACSTSDFQGNYFR 598
+AVK L +H R + E + L++++H N++ ++ A S DF Y
Sbjct: 56 VAVKKLSRPFQSLIHARRTYR----ELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLV 111
Query: 599 ALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN 658
+ + ++S + LS + + L+Y+H I+H DLKPSNV ++
Sbjct: 112 TTLMGADLNNIVKS--QALSDEHVQFLVYQLLRGLKYIH---SAGIIHRDLKPSNVAVNE 166
Query: 659 DMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE 697
D + DFGL R E M+ G T Y PE
Sbjct: 167 DSELRILDFGLARQADEEMT-------GYVATRWYRAPE 198
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 70/162 (43%), Gaps = 26/162 (16%)
Query: 546 QTFIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEF 604
Q +A+K + G S E L I+H N+V + + G+ + L+ +
Sbjct: 43 QKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESG---GHLY--LIMQL 97
Query: 605 MHHGSLESCPRILS---FLRR--LNIAIDVASALEYLHHHCKKPIVHCDLKPSNVL---L 656
+ G L RI+ + R + V A++YLH IVH DLKP N+L L
Sbjct: 98 VSGGEL--FDRIVEKGFYTERDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSL 152
Query: 657 DNDMTAHMGDFGLTRF-IPEVMSSNQCSSVGLKGTVGYATPE 697
D D + DFGL++ P + S C GT GY PE
Sbjct: 153 DEDSKIMISDFGLSKMEDPGSVLSTAC------GTPGYVAPE 188
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 64/145 (44%), Gaps = 19/145 (13%)
Query: 608 GSLESCPRILSFLRRL----NIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAH 663
GS+ L F++R NI + SAL YLH+ + I H D+KP N L + +
Sbjct: 152 GSIHGFRESLDFVQREKLISNIMRQIFSALHYLHN---QGICHRDIKPENFLFSTNKSFE 208
Query: 664 MG--DFGLTRFIPEVMSSNQCSSVGLKGTVGYATPEYGILLLEIFTGKRPTSDMFTEGLD 721
+ DFGL++ ++ + GT + PE +L P D ++ G+
Sbjct: 209 IKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPE---VLNTTNESYGPKCDAWSAGVL 265
Query: 722 LHNFVKMALP-------DQILQVLD 739
LH + A+P D I QVL+
Sbjct: 266 LHLLLMGAVPFPGVNDADTISQVLN 290
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 63/144 (43%), Gaps = 16/144 (11%)
Query: 535 ATVYKGILDLDQTFIAVKVLFL--HQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF 592
VYK L +A+K + L G + + E L+ + H N+VK++ T +
Sbjct: 16 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENK 75
Query: 593 QGNYFRAL---VYEFMHHGSLESCPR--ILSFLRRLNIAIDVASALEYLHHHCKKPIVHC 647
F + + FM +L P I S+L +L L + H H ++H
Sbjct: 76 LYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQL------LQGLAFCHSHR---VLHR 126
Query: 648 DLKPSNVLLDNDMTAHMGDFGLTR 671
DLKP N+L++ + + DFGL R
Sbjct: 127 DLKPQNLLINTEGAIKLADFGLAR 150
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 73/169 (43%), Gaps = 29/169 (17%)
Query: 563 KSFMAECQALRNIRHRNLVKIITACSTS----DFQGNY-----FRALVYEFMHHGSLESC 613
K + E + L++ +H N++ I + +F+ Y + +++ +H +
Sbjct: 99 KRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTL 158
Query: 614 PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673
+ FL +L L+Y+H ++H DLKPSN+L++ + +GDFG+ R +
Sbjct: 159 EHVRYFLYQL------LRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGL 209
Query: 674 PEVMSSNQCSSVGLKGTVGYATPEYGILLLEIFTGKRPTSDMFTEGLDL 722
+ +Q T Y PE + L E +T+ +DL
Sbjct: 210 CTSPAEHQYFMTEYVATRWYRAPELMLSLHE-----------YTQAIDL 247
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 70/162 (43%), Gaps = 26/162 (16%)
Query: 546 QTFIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEF 604
Q +A+K + G S E L I+H N+V + + G+ + L+ +
Sbjct: 43 QKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYESG---GHLY--LIMQL 97
Query: 605 MHHGSLESCPRILS---FLRR--LNIAIDVASALEYLHHHCKKPIVHCDLKPSNVL---L 656
+ G L RI+ + R + V A++YLH IVH DLKP N+L L
Sbjct: 98 VSGGEL--FDRIVEKGFYTERDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSL 152
Query: 657 DNDMTAHMGDFGLTRF-IPEVMSSNQCSSVGLKGTVGYATPE 697
D D + DFGL++ P + S C GT GY PE
Sbjct: 153 DEDSKIMISDFGLSKMEDPGSVLSTAC------GTPGYVAPE 188
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 7/74 (9%)
Query: 624 NIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCS 683
IA+ + ALE+LH K ++H D+KPSNVL++ M DFG++ ++ V S +
Sbjct: 157 KIAVSIVKALEHLHS--KLSVIHRDVKPSNVLINALGQVKMCDFGISGYL--VDSVAKTI 212
Query: 684 SVGLKGTVGYATPE 697
G K Y PE
Sbjct: 213 DAGCK---PYMAPE 223
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 74/167 (44%), Gaps = 29/167 (17%)
Query: 568 ECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGS-------LESCPRILSFL 620
E L + H N++K++ F+ F LV E HGS ++ PR+ L
Sbjct: 79 EIAILSRVEHANIIKVLDI-----FENQGFFQLVME--KHGSGLDLFAFIDRHPRLDEPL 131
Query: 621 RRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPE-VMSS 679
I + SA+ YL K I+H D+K N+++ D T + DFG ++ +
Sbjct: 132 ASY-IFRQLVSAVGYLRL---KDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFY 187
Query: 680 NQCSSVGLKGTVGYATPEYGILLLEIFTGKRPTSDMFTEGLDLHNFV 726
C GT+ Y PE +L+ + G P +M++ G+ L+ V
Sbjct: 188 TFC------GTIEYCAPE--VLMGNPYRG--PELEMWSLGVTLYTLV 224
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 93/223 (41%), Gaps = 44/223 (19%)
Query: 537 VYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACST---SDFQ 593
V+KGI + Q +A+K++ L + + + +++ C + + +
Sbjct: 43 VFKGIDNRTQKVVAIKIIDLEE-----------AEDEIEDIQQEITVLSQCDSPYVTKYY 91
Query: 594 GNYFRA----LVYEFMHHGS----LESCP----RILSFLRRLNIAIDVASALEYLHHHCK 641
G+Y + ++ E++ GS LE P +I + LR ++ L+YLH K
Sbjct: 92 GSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILR------EILKGLDYLHSEKK 145
Query: 642 KPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPEYGIL 701
+H D+K +NVLL + DFG + ++ Q GT + PE ++
Sbjct: 146 ---IHRDIKAANVLLSEHGEVKLADFG----VAGQLTDTQIKRNTFVGTPFWMAPE--VI 196
Query: 702 LLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFLV 744
+ K +D+++ G+ + P L + LFL+
Sbjct: 197 KQSAYDSK---ADIWSLGITAIELARGEPPHSELHPMKVLFLI 236
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 83/201 (41%), Gaps = 43/201 (21%)
Query: 535 ATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQG 594
TVY + +A++ + L Q+ + + E +R ++ N+V + + D
Sbjct: 34 GTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDE-- 91
Query: 595 NYFRALVYEFMHHGSL-----ESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVH 646
+V E++ GSL E+C +I + R + ALE+LH + ++H
Sbjct: 92 ---LWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR------ECLQALEFLHSN---QVIH 139
Query: 647 CDLKPSNVLLDNDMTAHMGDFGL-TRFIPEVMSSNQCSSVGLKGTVGYATPEY------- 698
D+K N+LL D + + DFG + PE Q + GT + PE
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPE-----QSKRSTMVGTPYWMAPEVVTRKAYG 194
Query: 699 --------GILLLEIFTGKRP 711
GI+ +E+ G+ P
Sbjct: 195 PKVDIWSLGIMAIEMIEGEPP 215
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 70/162 (43%), Gaps = 26/162 (16%)
Query: 546 QTFIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEF 604
Q +A+K + G S E L I+H N+V + + G+ + L+ +
Sbjct: 43 QKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESG---GHLY--LIMQL 97
Query: 605 MHHGSLESCPRILS---FLRR--LNIAIDVASALEYLHHHCKKPIVHCDLKPSNVL---L 656
+ G L RI+ + R + V A++YLH IVH DLKP N+L L
Sbjct: 98 VSGGEL--FDRIVEKGFYTERDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSL 152
Query: 657 DNDMTAHMGDFGLTRF-IPEVMSSNQCSSVGLKGTVGYATPE 697
D D + DFGL++ P + S C GT GY PE
Sbjct: 153 DEDSKIMISDFGLSKMEDPGSVLSTAC------GTPGYVAPE 188
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 63/140 (45%), Gaps = 28/140 (20%)
Query: 568 ECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESCPRILSFLRRLNIAI 627
E L+ I+H N I+T + +Y+ LV + + G L RIL R +
Sbjct: 56 EIAVLKKIKHEN---IVTLEDIYESTTHYY--LVMQLVSGGEL--FDRILE--RGVYTEK 106
Query: 628 D-------VASALEYLHHHCKKPIVHCDLKPSNVLL---DNDMTAHMGDFGLTRFIPEVM 677
D V SA++YLH + IVH DLKP N+L + + + DFGL++ +
Sbjct: 107 DASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGI 163
Query: 678 SSNQCSSVGLKGTVGYATPE 697
S C GT GY PE
Sbjct: 164 MSTAC------GTPGYVAPE 177
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 83/201 (41%), Gaps = 43/201 (21%)
Query: 535 ATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQG 594
TVY + +A++ + L Q+ + + E +R ++ N+V + + D
Sbjct: 34 GTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDE-- 91
Query: 595 NYFRALVYEFMHHGSL-----ESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVH 646
+V E++ GSL E+C +I + R + ALE+LH + ++H
Sbjct: 92 ---LWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR------ECLQALEFLHSN---QVIH 139
Query: 647 CDLKPSNVLLDNDMTAHMGDFGL-TRFIPEVMSSNQCSSVGLKGTVGYATPEY------- 698
D+K N+LL D + + DFG + PE Q + GT + PE
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPE-----QSKRSXMVGTPYWMAPEVVTRKAYG 194
Query: 699 --------GILLLEIFTGKRP 711
GI+ +E+ G+ P
Sbjct: 195 PKVDIWSLGIMAIEMIEGEPP 215
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 70/162 (43%), Gaps = 26/162 (16%)
Query: 546 QTFIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEF 604
Q +A+K + G S E L I+H N+V + + G+ + L+ +
Sbjct: 43 QKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESG---GHLY--LIMQL 97
Query: 605 MHHGSLESCPRILS---FLRR--LNIAIDVASALEYLHHHCKKPIVHCDLKPSNVL---L 656
+ G L RI+ + R + V A++YLH IVH DLKP N+L L
Sbjct: 98 VSGGEL--FDRIVEKGFYTERDASRLIFQVLDAVKYLH---DLGIVHRDLKPENLLYYSL 152
Query: 657 DNDMTAHMGDFGLTRF-IPEVMSSNQCSSVGLKGTVGYATPE 697
D D + DFGL++ P + S C GT GY PE
Sbjct: 153 DEDSKIMISDFGLSKMEDPGSVLSTAC------GTPGYVAPE 188
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 25/123 (20%)
Query: 563 KSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESCPRILSFLRR 622
+ F+ E +R H ++VK+I + + ++ E G L S FL+
Sbjct: 84 EKFLQEALTMRQFDHPHIVKLIGVITENPVW------IIMELCTLGELRS------FLQV 131
Query: 623 LNIAIDVAS----------ALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRF 672
++D+AS AL YL K VH D+ NVL+ ++ +GDFGL+R+
Sbjct: 132 RKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY 188
Query: 673 IPE 675
+ +
Sbjct: 189 MED 191
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 83/201 (41%), Gaps = 43/201 (21%)
Query: 535 ATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQG 594
TVY + +A++ + L Q+ + + E +R ++ N+V + + D
Sbjct: 35 GTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDE-- 92
Query: 595 NYFRALVYEFMHHGSL-----ESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVH 646
+V E++ GSL E+C +I + R + ALE+LH + ++H
Sbjct: 93 ---LWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR------ECLQALEFLHSN---QVIH 140
Query: 647 CDLKPSNVLLDNDMTAHMGDFGL-TRFIPEVMSSNQCSSVGLKGTVGYATPEY------- 698
D+K N+LL D + + DFG + PE Q + GT + PE
Sbjct: 141 RDIKSDNILLGMDGSVKLTDFGFCAQITPE-----QSKRSXMVGTPYWMAPEVVTRKAYG 195
Query: 699 --------GILLLEIFTGKRP 711
GI+ +E+ G+ P
Sbjct: 196 PKVDIWSLGIMAIEMIEGEPP 216
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 83/201 (41%), Gaps = 43/201 (21%)
Query: 535 ATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQG 594
TVY + +A++ + L Q+ + + E +R ++ N+V + + D
Sbjct: 34 GTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDE-- 91
Query: 595 NYFRALVYEFMHHGSL-----ESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVH 646
+V E++ GSL E+C +I + R + ALE+LH + ++H
Sbjct: 92 ---LWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR------ECLQALEFLHSN---QVIH 139
Query: 647 CDLKPSNVLLDNDMTAHMGDFGL-TRFIPEVMSSNQCSSVGLKGTVGYATPEY------- 698
D+K N+LL D + + DFG + PE Q + GT + PE
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPE-----QSKRSEMVGTPYWMAPEVVTRKAYG 194
Query: 699 --------GILLLEIFTGKRP 711
GI+ +E+ G+ P
Sbjct: 195 PKVDIWSLGIMAIEMIEGEPP 215
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 25/123 (20%)
Query: 563 KSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESCPRILSFLRR 622
+ F+ E +R H ++VK+I + + ++ E G L S FL+
Sbjct: 59 EKFLQEALTMRQFDHPHIVKLIGVITENPVW------IIMELCTLGELRS------FLQV 106
Query: 623 LNIAIDVAS----------ALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRF 672
++D+AS AL YL K VH D+ NVL+ ++ +GDFGL+R+
Sbjct: 107 RKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY 163
Query: 673 IPE 675
+ +
Sbjct: 164 MED 166
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 25/123 (20%)
Query: 563 KSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESCPRILSFLRR 622
+ F+ E +R H ++VK+I + + ++ E G L S FL+
Sbjct: 61 EKFLQEALTMRQFDHPHIVKLIGVITENPVW------IIMELCTLGELRS------FLQV 108
Query: 623 LNIAIDVAS----------ALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRF 672
++D+AS AL YL K VH D+ NVL+ ++ +GDFGL+R+
Sbjct: 109 RKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY 165
Query: 673 IPE 675
+ +
Sbjct: 166 MED 168
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 25/123 (20%)
Query: 563 KSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESCPRILSFLRR 622
+ F+ E +R H ++VK+I + + ++ E G L S FL+
Sbjct: 56 EKFLQEALTMRQFDHPHIVKLIGVITENPVW------IIMELCTLGELRS------FLQV 103
Query: 623 LNIAIDVAS----------ALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRF 672
++D+AS AL YL K VH D+ NVL+ ++ +GDFGL+R+
Sbjct: 104 RKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY 160
Query: 673 IPE 675
+ +
Sbjct: 161 MED 163
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 25/123 (20%)
Query: 563 KSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESCPRILSFLRR 622
+ F+ E +R H ++VK+I + + ++ E G L S FL+
Sbjct: 58 EKFLQEALTMRQFDHPHIVKLIGVITENPVW------IIMELCTLGELRS------FLQV 105
Query: 623 LNIAIDVAS----------ALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRF 672
++D+AS AL YL K VH D+ NVL+ ++ +GDFGL+R+
Sbjct: 106 RKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY 162
Query: 673 IPE 675
+ +
Sbjct: 163 MED 165
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 25/123 (20%)
Query: 563 KSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESCPRILSFLRR 622
+ F+ E +R H ++VK+I + + ++ E G L S FL+
Sbjct: 53 EKFLQEALTMRQFDHPHIVKLIGVITENPVW------IIMELCTLGELRS------FLQV 100
Query: 623 LNIAIDVAS----------ALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRF 672
++D+AS AL YL K VH D+ NVL+ ++ +GDFGL+R+
Sbjct: 101 RKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY 157
Query: 673 IPE 675
+ +
Sbjct: 158 MED 160
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 624 NIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSN 680
IA+ + ALE+LH K ++H D+KPSNVL++ M DFG++ ++ + ++ +
Sbjct: 113 KIAVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKD 167
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 25/123 (20%)
Query: 563 KSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESCPRILSFLRR 622
+ F+ E +R H ++VK+I + + ++ E G L S FL+
Sbjct: 56 EKFLQEALTMRQFDHPHIVKLIGVITENPVW------IIMELCTLGELRS------FLQV 103
Query: 623 LNIAIDVAS----------ALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRF 672
++D+AS AL YL K VH D+ NVL+ ++ +GDFGL+R+
Sbjct: 104 RKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRY 160
Query: 673 IPE 675
+ +
Sbjct: 161 MED 163
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 86/219 (39%), Gaps = 41/219 (18%)
Query: 535 ATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRHRNLVKIITACSTSD 591
+V +G+ + + I V + L Q + + M E Q + + + +V++I C
Sbjct: 350 GSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEA 409
Query: 592 FQGNYFRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHC-------KKPI 644
LV E G L FL I V++ E LH +K
Sbjct: 410 LM------LVMEMAGGGPLHK------FLVGKREEIPVSNVAELLHQVSMGMKYLEEKNF 457
Query: 645 VHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE------- 697
VH +L NVLL N A + DFGL++ + S S G K + + PE
Sbjct: 458 VHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAG-KWPLKWYAPECINFRKF 516
Query: 698 --------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVK 727
YG+ + E + G++P M +G ++ F++
Sbjct: 517 SSRSDVWSYGVTMWEALSYGQKPYKKM--KGPEVMAFIE 553
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 27/165 (16%)
Query: 549 IAVKVLFLHQRGALKSFMAECQALRNI--RHRNLVKIITACSTSDFQGNYFR-ALVYEFM 605
+AVK+ + +S+ E + + + RH N++ I A + + G + + LV ++
Sbjct: 68 VAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAADNKDN--GTWTQLWLVSDYH 122
Query: 606 HHGSLESCPRILSFLRR--------LNIAIDVASALEYLHHHC-----KKPIVHCDLKPS 652
HGSL +L R + +A+ AS L +LH K I H DLK
Sbjct: 123 EHGSL------FDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSK 176
Query: 653 NVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE 697
N+L+ + T + D GL + + GT Y PE
Sbjct: 177 NILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 221
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 82/210 (39%), Gaps = 47/210 (22%)
Query: 562 LKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESCPRILSFLR 621
+++F+ E +R + H N++ +I + + ++ +M HG L L F+R
Sbjct: 66 VEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPH----VLLPYMCHGDL------LQFIR 115
Query: 622 R----------LNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTR 671
++ + VA +EYL ++ VH DL N +LD T + DFGL R
Sbjct: 116 SPQRNPTVKDLISFGLQVARGMEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLAR 172
Query: 672 FI--PEVMSSNQCSSVGL-------------KGTVGYATPEYGILLLEIFTGKRPTSDMF 716
I E S Q L + T +G+LL E+ T P
Sbjct: 173 DILDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPY-RH 231
Query: 717 TEGLDLHNFVKMA--------LPDQILQVL 738
+ DL +F+ PD + QV+
Sbjct: 232 IDPFDLTHFLAQGRRLPQPEYCPDSLYQVM 261
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 8/70 (11%)
Query: 629 VASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLK 688
V ++ Y+H+ K I H D+KPSN+L+D + + DFG + ++ + G +
Sbjct: 160 VLNSFSYIHNE--KNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIK------GSR 211
Query: 689 GTVGYATPEY 698
GT + PE+
Sbjct: 212 GTYEFMPPEF 221
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 75/176 (42%), Gaps = 35/176 (19%)
Query: 562 LKSFMAECQALRNI-RHRNLVKIITACSTSD---------FQGN---YFRALVYEFMHHG 608
L ++E + ++ I +H+N++ ++ AC+ +GN Y RA M +
Sbjct: 84 LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYS 143
Query: 609 -SLESCPR-ILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGD 666
+ P ++F ++ +A +EYL + +H DL NVL+ + + D
Sbjct: 144 YDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIAD 200
Query: 667 FGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT 707
FGL R I + + ++ L V + PE +G+L+ EIFT
Sbjct: 201 FGLARDINNIDXXKKTTNGRL--PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 78/169 (46%), Gaps = 40/169 (23%)
Query: 571 ALRNIRHRNLVKIITACSTS---DFQGNYFR----ALVYEFMHHGSLESCPRILSFLRRL 623
A+RN R L +++ C++ F G ++ ++ E M GSL+ ++L +R+
Sbjct: 56 AIRNQIIREL-QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLD---QVLKEAKRI 111
Query: 624 ------NIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVM 677
++I V L YL K I+H D+KPSN+L+++ + DFG++ + + M
Sbjct: 112 PEEILGKVSIAVLRGLAYLRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM 169
Query: 678 SSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRP 711
+++ GT Y PE G+ L+E+ G+ P
Sbjct: 170 ANS------FVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYP 212
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 78/169 (46%), Gaps = 40/169 (23%)
Query: 571 ALRNIRHRNLVKIITACSTS---DFQGNYFR----ALVYEFMHHGSLESCPRILSFLRRL 623
A+RN R L +++ C++ F G ++ ++ E M GSL+ ++L R+
Sbjct: 108 AIRNQIIREL-QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLD---QVLKKAGRI 163
Query: 624 ------NIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVM 677
++I V L YL K I+H D+KPSN+L+++ + DFG++ + + M
Sbjct: 164 PEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM 221
Query: 678 SSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRP 711
+++ GT Y +PE G+ L+E+ G+ P
Sbjct: 222 ANS------FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 264
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 85/205 (41%), Gaps = 46/205 (22%)
Query: 537 VYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACST---SDFQ 593
VYKGI + + +A+K++ L E + + +++ C + + +
Sbjct: 35 VYKGIDNHTKEVVAIKIIDL-----------EEAEDEIEDIQQEITVLSQCDSPYITRYF 83
Query: 594 GNYFRA----LVYEFMHHGS----LESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIV 645
G+Y ++ ++ E++ GS L+ P +++ I ++ L+YLH K +
Sbjct: 84 GSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYI--ATILREILKGLDYLHSERK---I 138
Query: 646 HCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPEY------- 698
H D+K +NVLL + DFG + ++ Q GT + PE
Sbjct: 139 HRDIKAANVLLSEQGDVKLADFG----VAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYD 194
Query: 699 --------GILLLEIFTGKRPTSDM 715
GI +E+ G+ P SD+
Sbjct: 195 FKADIWSLGITAIELAKGEPPNSDL 219
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 78/173 (45%), Gaps = 40/173 (23%)
Query: 571 ALRNIRHRNLVKIITACSTS---DFQGNYFR----ALVYEFMHHGSLESCPRILSFLRRL 623
A+RN R L +++ C++ F G ++ ++ E M GSL+ ++L R+
Sbjct: 49 AIRNQIIREL-QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLD---QVLKKAGRI 104
Query: 624 ------NIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVM 677
++I V L YL K I+H D+KPSN+L+++ + DFG++ + + M
Sbjct: 105 PEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDEM 162
Query: 678 SSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDM 715
++ GT Y +PE G+ L+E+ G+ P M
Sbjct: 163 ANE------FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPRPPM 209
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 65/146 (44%), Gaps = 21/146 (14%)
Query: 559 RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESCPRILS 618
+G S E LR I+H N+V + ++ LV + + G L RI+
Sbjct: 61 KGKESSIENEIAVLRKIKHENIVAL-----EDIYESPNHLYLVMQLVSGGEL--FDRIVE 113
Query: 619 --FLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLL---DNDMTAHMGDFGLTRF- 672
F + + + L+ +++ + IVH DLKP N+L D + + DFGL++
Sbjct: 114 KGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKME 173
Query: 673 -IPEVMSSNQCSSVGLKGTVGYATPE 697
+VMS+ C GT GY PE
Sbjct: 174 GKGDVMST-AC------GTPGYVAPE 192
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 63/154 (40%), Gaps = 30/154 (19%)
Query: 535 ATVYKGILDLDQTFIAVKVLFLHQRGAL-----KSFMAECQALRNIRHRNLVKIITACST 589
TVYKG+ + + + V R A K + E + ++ + ++ +++ C T
Sbjct: 33 GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT 92
Query: 590 SDFQGNYFRALVYEFMHHGSLESCPRILSFLRR----------LNIAIDVASALEYLHHH 639
S Q L+ + M G L L ++R LN + +A + YL
Sbjct: 93 STVQ------LIMQLMPFGCL------LDYVREHKDNIGSQYLLNWCVQIAKGMNYLE-- 138
Query: 640 CKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673
+ +VH DL NVL+ + DFGL + +
Sbjct: 139 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 171
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 75/178 (42%), Gaps = 30/178 (16%)
Query: 537 VYKGILDLD-QTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQ-- 593
V+K +D +T++ +V + +++ E +AL + H N+V D+
Sbjct: 27 VFKAKHRIDGKTYVIKRVKYNNEKAE-----REVKALAKLDHVNIVHYNGCWDGFDYDPE 81
Query: 594 ---GNYFRA------LVYEFMHHGSLESC-----PRILSFLRRLNIAIDVASALEYLHHH 639
N R+ + EF G+LE L + L + + ++Y+H
Sbjct: 82 TSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHS- 140
Query: 640 CKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE 697
K +++ DLKPSN+ L + +GDFGL + N KGT+ Y +PE
Sbjct: 141 --KKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLK-----NDGKRXRSKGTLRYMSPE 191
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 70/157 (44%), Gaps = 19/157 (12%)
Query: 521 KDLLLNVSYESLVKATVYKGIL-------DLDQTFIAVKVLFLHQRGALKSFMAECQALR 573
+DL+ N S ++KG+ L +T + +KVL R +SF +
Sbjct: 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMS 67
Query: 574 NIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESCPR----ILSFLRRLNIAIDV 629
+ H++LV C D LV EF+ GSL++ + ++ L +L +A +
Sbjct: 68 KLSHKHLVLNYGVCVCGDEN-----ILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQL 122
Query: 630 ASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGD 666
A+A+ +L + ++H ++ N+LL + G+
Sbjct: 123 AAAMHFLEENT---LIHGNVCAKNILLIREEDRKTGN 156
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 69/170 (40%), Gaps = 34/170 (20%)
Query: 564 SFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESC---------- 613
F+ E + + H+N+V+ I S R ++ E M G L+S
Sbjct: 94 DFLMEALIISKLNHQNIVRCIGVSLQS-----LPRFILLELMAGGDLKSFLRETRPRPSQ 148
Query: 614 PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD---NDMTAHMGDFGLT 670
P L+ L L++A D+A +YL + +H D+ N LL A +GDFG+
Sbjct: 149 PSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 205
Query: 671 RFI--PEVMSSNQCSSVGLKG-----------TVGYATPEYGILLLEIFT 707
R I C+ + +K T T +G+LL EIF+
Sbjct: 206 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 78/169 (46%), Gaps = 40/169 (23%)
Query: 571 ALRNIRHRNLVKIITACSTS---DFQGNYFR----ALVYEFMHHGSLESCPRILSFLRRL 623
A+RN R L +++ C++ F G ++ ++ E M GSL+ ++L R+
Sbjct: 65 AIRNQIIREL-QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLD---QVLKKAGRI 120
Query: 624 ------NIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVM 677
++I V L YL K I+H D+KPSN+L+++ + DFG++ + + M
Sbjct: 121 PEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM 178
Query: 678 SSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRP 711
+++ GT Y +PE G+ L+E+ G+ P
Sbjct: 179 ANS------FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 221
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 65/149 (43%), Gaps = 29/149 (19%)
Query: 562 LKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESCPRILSFLR 621
++ AE + L+++ H N++KI D+ Y +V E G L RI+S
Sbjct: 64 MEQIEAEIEVLKSLDHPNIIKIFEVFE--DYHNMY---IVMETCEGGEL--LERIVSAQA 116
Query: 622 R---------LNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAH----MGDFG 668
R + + +AL Y H + +VH DLKP N+L D + H + DFG
Sbjct: 117 RGKALSEGYVAELMKQMMNALAYFH---SQHVVHKDLKPENILF-QDTSPHSPIKIIDFG 172
Query: 669 LTRFIPEVMSSNQCSSVGLKGTVGYATPE 697
L E+ S++ S GT Y PE
Sbjct: 173 LA----ELFKSDE-HSTNAAGTALYMAPE 196
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 92/236 (38%), Gaps = 67/236 (28%)
Query: 528 SYESLVKATVYKGILDLDQTF-IAVKVL----FLHQRGALKSFMAECQALRNIRHRNLVK 582
++ +V+AT Y G++ D +AVK+L L +R AL S + L N H N+V
Sbjct: 58 AFGKVVEATAY-GLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN--HMNIVN 114
Query: 583 IITACSTSDFQGNYFRALVYEFMHHGSLESCPRILSFLRR-------------------- 622
++ AC+ ++ E+ +G L L+FLRR
Sbjct: 115 LLGACTIGGPT-----LVITEYCCYGDL------LNFLRRKRDSFICSKTSPAIMEDDEL 163
Query: 623 -------LNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPE 675
L+ + VA + +L K +H DL N+LL + + DFGL R I
Sbjct: 164 ALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKN 220
Query: 676 VMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDM 715
SN + V + PE YGI L E+F+ G P M
Sbjct: 221 --DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM 274
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 69/169 (40%), Gaps = 34/169 (20%)
Query: 565 FMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESC----------P 614
F+ E + + H+N+V+ I S R ++ E M G L+S P
Sbjct: 81 FLMEALIISKLNHQNIVRCIGVSLQS-----LPRFILLELMAGGDLKSFLRETRPRPSQP 135
Query: 615 RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD---NDMTAHMGDFGLTR 671
L+ L L++A D+A +YL + +H D+ N LL A +GDFG+ R
Sbjct: 136 SSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 192
Query: 672 FI--PEVMSSNQCSSVGLKG-----------TVGYATPEYGILLLEIFT 707
I C+ + +K T T +G+LL EIF+
Sbjct: 193 DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 27/165 (16%)
Query: 549 IAVKVLFLHQRGALKSFMAECQALRNI--RHRNLVKIITACSTSDFQGNYFR-ALVYEFM 605
+AVK+ + +S+ E + + + RH N++ I A + + G + + LV ++
Sbjct: 55 VAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAADNKDN--GTWTQLWLVSDYH 109
Query: 606 HHGSLESCPRILSFLRR--------LNIAIDVASALEYLHHHC-----KKPIVHCDLKPS 652
HGSL +L R + +A+ AS L +LH K I H DLK
Sbjct: 110 EHGSL------FDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSK 163
Query: 653 NVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE 697
N+L+ + T + D GL + + GT Y PE
Sbjct: 164 NILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 208
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 78/169 (46%), Gaps = 40/169 (23%)
Query: 571 ALRNIRHRNLVKIITACSTS---DFQGNYFR----ALVYEFMHHGSLESCPRILSFLRRL 623
A+RN R L +++ C++ F G ++ ++ E M GSL+ ++L R+
Sbjct: 73 AIRNQIIREL-QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLD---QVLKKAGRI 128
Query: 624 ------NIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVM 677
++I V L YL K I+H D+KPSN+L+++ + DFG++ + + M
Sbjct: 129 PEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM 186
Query: 678 SSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRP 711
+++ GT Y +PE G+ L+E+ G+ P
Sbjct: 187 ANS------FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 229
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 53/117 (45%), Gaps = 13/117 (11%)
Query: 563 KSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESCPRILSFLRR 622
+ F+ E +R H ++VK+I + + ++ E G L S ++ F
Sbjct: 436 EKFLQEALTMRQFDHPHIVKLIGVITENPVW------IIMELCTLGELRSFLQVRKFSLD 489
Query: 623 LN----IAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPE 675
L A +++AL YL K VH D+ NVL+ +GDFGL+R++ +
Sbjct: 490 LASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMED 543
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 63/154 (40%), Gaps = 30/154 (19%)
Query: 535 ATVYKGILDLDQTFIAVKVLFLHQRGAL-----KSFMAECQALRNIRHRNLVKIITACST 589
TVYKG+ + + + V R A K + E + ++ + ++ +++ C T
Sbjct: 32 GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT 91
Query: 590 SDFQGNYFRALVYEFMHHGSLESCPRILSFLRR----------LNIAIDVASALEYLHHH 639
S Q L+ + M G L L ++R LN + +A + YL
Sbjct: 92 STVQ------LIMQLMPFGCL------LDYVREHKDNIGSQYLLNWCVQIAKGMNYLE-- 137
Query: 640 CKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673
+ +VH DL NVL+ + DFGL + +
Sbjct: 138 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 170
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 63/154 (40%), Gaps = 30/154 (19%)
Query: 535 ATVYKGILDLDQTFIAVKVLFLHQRGAL-----KSFMAECQALRNIRHRNLVKIITACST 589
TVYKG+ + + + V R A K + E + ++ + ++ +++ C T
Sbjct: 31 GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT 90
Query: 590 SDFQGNYFRALVYEFMHHGSLESCPRILSFLRR----------LNIAIDVASALEYLHHH 639
S Q L+ + M G L L ++R LN + +A + YL
Sbjct: 91 STVQ------LIMQLMPFGCL------LDYVREHKDNIGSQYLLNWCVQIAKGMNYLE-- 136
Query: 640 CKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673
+ +VH DL NVL+ + DFGL + +
Sbjct: 137 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 169
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 78/169 (46%), Gaps = 40/169 (23%)
Query: 571 ALRNIRHRNLVKIITACSTS---DFQGNYFR----ALVYEFMHHGSLESCPRILSFLRRL 623
A+RN R L +++ C++ F G ++ ++ E M GSL+ ++L R+
Sbjct: 46 AIRNQIIREL-QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLD---QVLKKAGRI 101
Query: 624 ------NIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVM 677
++I V L YL K I+H D+KPSN+L+++ + DFG++ + + M
Sbjct: 102 PEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM 159
Query: 678 SSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRP 711
+++ GT Y +PE G+ L+E+ G+ P
Sbjct: 160 ANS------FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 63/154 (40%), Gaps = 30/154 (19%)
Query: 535 ATVYKGILDLDQTFIAVKVLFLHQRGAL-----KSFMAECQALRNIRHRNLVKIITACST 589
TVYKG+ + + + V R A K + E + ++ + ++ +++ C T
Sbjct: 36 GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT 95
Query: 590 SDFQGNYFRALVYEFMHHGSLESCPRILSFLRR----------LNIAIDVASALEYLHHH 639
S Q L+ + M G L L ++R LN + +A + YL
Sbjct: 96 STVQ------LIMQLMPFGCL------LDYVREHKDNIGSQYLLNWCVQIAKGMNYLE-- 141
Query: 640 CKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673
+ +VH DL NVL+ + DFGL + +
Sbjct: 142 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 174
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 78/169 (46%), Gaps = 40/169 (23%)
Query: 571 ALRNIRHRNLVKIITACSTS---DFQGNYFR----ALVYEFMHHGSLESCPRILSFLRRL 623
A+RN R L +++ C++ F G ++ ++ E M GSL+ ++L R+
Sbjct: 46 AIRNQIIREL-QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLD---QVLKKAGRI 101
Query: 624 ------NIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVM 677
++I V L YL K I+H D+KPSN+L+++ + DFG++ + + M
Sbjct: 102 PEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM 159
Query: 678 SSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRP 711
+++ GT Y +PE G+ L+E+ G+ P
Sbjct: 160 ANS------FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 78/169 (46%), Gaps = 40/169 (23%)
Query: 571 ALRNIRHRNLVKIITACSTS---DFQGNYFR----ALVYEFMHHGSLESCPRILSFLRRL 623
A+RN R L +++ C++ F G ++ ++ E M GSL+ ++L R+
Sbjct: 46 AIRNQIIREL-QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLD---QVLKKAGRI 101
Query: 624 ------NIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVM 677
++I V L YL K I+H D+KPSN+L+++ + DFG++ + + M
Sbjct: 102 PEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM 159
Query: 678 SSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRP 711
+++ GT Y +PE G+ L+E+ G+ P
Sbjct: 160 ANS------FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 63/154 (40%), Gaps = 30/154 (19%)
Query: 535 ATVYKGILDLDQTFIAVKVLFLHQRGAL-----KSFMAECQALRNIRHRNLVKIITACST 589
TVYKG+ + + + V R A K + E + ++ + ++ +++ C T
Sbjct: 30 GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT 89
Query: 590 SDFQGNYFRALVYEFMHHGSLESCPRILSFLRR----------LNIAIDVASALEYLHHH 639
S Q L+ + M G L L ++R LN + +A + YL
Sbjct: 90 STVQ------LIMQLMPFGXL------LDYVREHKDNIGSQYLLNWCVQIAKGMNYLE-- 135
Query: 640 CKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673
+ +VH DL NVL+ + DFGL + +
Sbjct: 136 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 168
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 78/169 (46%), Gaps = 40/169 (23%)
Query: 571 ALRNIRHRNLVKIITACSTS---DFQGNYFR----ALVYEFMHHGSLESCPRILSFLRRL 623
A+RN R L +++ C++ F G ++ ++ E M GSL+ ++L R+
Sbjct: 46 AIRNQIIREL-QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLD---QVLKKAGRI 101
Query: 624 ------NIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVM 677
++I V L YL K I+H D+KPSN+L+++ + DFG++ + + M
Sbjct: 102 PEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM 159
Query: 678 SSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRP 711
+++ GT Y +PE G+ L+E+ G+ P
Sbjct: 160 ANS------FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 63/154 (40%), Gaps = 30/154 (19%)
Query: 535 ATVYKGILDLDQTFIAVKVLFLHQRGAL-----KSFMAECQALRNIRHRNLVKIITACST 589
TVYKG+ + + + V R A K + E + ++ + ++ +++ C T
Sbjct: 30 GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT 89
Query: 590 SDFQGNYFRALVYEFMHHGSLESCPRILSFLRR----------LNIAIDVASALEYLHHH 639
S Q L+ + M G L L ++R LN + +A + YL
Sbjct: 90 STVQ------LIMQLMPFGCL------LDYVREHKDNIGSQYLLNWCVQIAKGMNYLE-- 135
Query: 640 CKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673
+ +VH DL NVL+ + DFGL + +
Sbjct: 136 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 168
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 63/154 (40%), Gaps = 30/154 (19%)
Query: 535 ATVYKGILDLDQTFIAVKVLFLHQRGAL-----KSFMAECQALRNIRHRNLVKIITACST 589
TVYKG+ + + + V R A K + E + ++ + ++ +++ C T
Sbjct: 31 GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT 90
Query: 590 SDFQGNYFRALVYEFMHHGSLESCPRILSFLRR----------LNIAIDVASALEYLHHH 639
S Q L+ + M G L L ++R LN + +A + YL
Sbjct: 91 STVQ------LITQLMPFGCL------LDYVREHKDNIGSQYLLNWCVQIAKGMNYLE-- 136
Query: 640 CKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673
+ +VH DL NVL+ + DFGL + +
Sbjct: 137 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 169
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 27/165 (16%)
Query: 549 IAVKVLFLHQRGALKSFMAECQALRNI--RHRNLVKIITACSTSDFQGNYFR-ALVYEFM 605
+AVK+ + +S+ E + + + RH N++ I A + + G + + LV ++
Sbjct: 32 VAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAADNKDN--GTWTQLWLVSDYH 86
Query: 606 HHGSLESCPRILSFLRR--------LNIAIDVASALEYLHHHC-----KKPIVHCDLKPS 652
HGSL +L R + +A+ AS L +LH K I H DLK
Sbjct: 87 EHGSL------FDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSK 140
Query: 653 NVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE 697
N+L+ + T + D GL + + GT Y PE
Sbjct: 141 NILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 185
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 27/165 (16%)
Query: 549 IAVKVLFLHQRGALKSFMAECQALRNI--RHRNLVKIITACSTSDFQGNYFR-ALVYEFM 605
+AVK+ + +S+ E + + + RH N++ I A + + G + + LV ++
Sbjct: 30 VAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAADNKDN--GTWTQLWLVSDYH 84
Query: 606 HHGSLESCPRILSFLRR--------LNIAIDVASALEYLHHHC-----KKPIVHCDLKPS 652
HGSL +L R + +A+ AS L +LH K I H DLK
Sbjct: 85 EHGSL------FDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSK 138
Query: 653 NVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE 697
N+L+ + T + D GL + + GT Y PE
Sbjct: 139 NILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 183
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 63/154 (40%), Gaps = 30/154 (19%)
Query: 535 ATVYKGILDLDQTFIAVKVLFLHQRGAL-----KSFMAECQALRNIRHRNLVKIITACST 589
TVYKG+ + + + V R A K + E + ++ + ++ +++ C T
Sbjct: 29 GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT 88
Query: 590 SDFQGNYFRALVYEFMHHGSLESCPRILSFLRR----------LNIAIDVASALEYLHHH 639
S Q L+ + M G L L ++R LN + +A + YL
Sbjct: 89 STVQ------LIMQLMPFGCL------LDYVREHKDNIGSQYLLNWCVQIAKGMNYLE-- 134
Query: 640 CKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673
+ +VH DL NVL+ + DFGL + +
Sbjct: 135 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 75/181 (41%), Gaps = 45/181 (24%)
Query: 562 LKSFMAECQALRNI-RHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESCPRI---- 616
L ++E + ++ I +H+N++ ++ AC+ G + ++ E+ G+L R
Sbjct: 84 LSDLVSEMEMMKMIGKHKNIINLLGACTQD---GPLY--VIVEYASKGNLREYLRARRPP 138
Query: 617 ---------------LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMT 661
++F ++ +A +EYL + +H DL NVL+ +
Sbjct: 139 GMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNV 195
Query: 662 AHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIF 706
+ DFGL R I + + ++ L V + PE +G+L+ EIF
Sbjct: 196 MKIADFGLARDINNIDXXKKTTNGRL--PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIF 253
Query: 707 T 707
T
Sbjct: 254 T 254
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 64/146 (43%), Gaps = 15/146 (10%)
Query: 561 ALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMH---HGSLESCPRIL 617
AL++ + E + L++ +H N++ I F+ ++ E M H + + ++L
Sbjct: 53 ALRT-LREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVIST--QML 109
Query: 618 SFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVM 677
S A++ LH ++H DLKPSN+L++++ + DFGL R I E
Sbjct: 110 SDDHIQYFIYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESA 166
Query: 678 SSN------QCSSVGLKGTVGYATPE 697
+ N Q T Y PE
Sbjct: 167 ADNSEPTGQQSGMTEYVATRWYRAPE 192
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 53/117 (45%), Gaps = 13/117 (11%)
Query: 563 KSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESCPRILSFLRR 622
+ F+ E +R H ++VK+I + + ++ E G L S ++ F
Sbjct: 56 EKFLQEALTMRQFDHPHIVKLIGVITENPVW------IIMELCTLGELRSFLQVRKFSLD 109
Query: 623 LN----IAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPE 675
L A +++AL YL K VH D+ NVL+ +GDFGL+R++ +
Sbjct: 110 LASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMED 163
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 27/165 (16%)
Query: 549 IAVKVLFLHQRGALKSFMAECQALRNI--RHRNLVKIITACSTSDFQGNYFR-ALVYEFM 605
+AVK+ + +S+ E + + + RH N++ I A + + G + + LV ++
Sbjct: 35 VAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAADNKDN--GTWTQLWLVSDYH 89
Query: 606 HHGSLESCPRILSFLRR--------LNIAIDVASALEYLHHHC-----KKPIVHCDLKPS 652
HGSL +L R + +A+ AS L +LH K I H DLK
Sbjct: 90 EHGSL------FDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSK 143
Query: 653 NVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE 697
N+L+ + T + D GL + + GT Y PE
Sbjct: 144 NILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 188
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 63/154 (40%), Gaps = 30/154 (19%)
Query: 535 ATVYKGILDLDQTFIAVKVLFLHQRGAL-----KSFMAECQALRNIRHRNLVKIITACST 589
TVYKG+ + + + V R A K + E + ++ + ++ +++ C T
Sbjct: 54 GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT 113
Query: 590 SDFQGNYFRALVYEFMHHGSLESCPRILSFLRR----------LNIAIDVASALEYLHHH 639
S Q L+ + M G L L ++R LN + +A + YL
Sbjct: 114 STVQ------LITQLMPFGCL------LDYVREHKDNIGSQYLLNWCVQIAKGMNYLE-- 159
Query: 640 CKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673
+ +VH DL NVL+ + DFGL + +
Sbjct: 160 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 192
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 63/154 (40%), Gaps = 30/154 (19%)
Query: 535 ATVYKGILDLDQTFIAVKVLFLHQRGAL-----KSFMAECQALRNIRHRNLVKIITACST 589
TVYKG+ + + + V R A K + E + ++ + ++ +++ C T
Sbjct: 36 GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT 95
Query: 590 SDFQGNYFRALVYEFMHHGSLESCPRILSFLRR----------LNIAIDVASALEYLHHH 639
S Q L+ + M G L L ++R LN + +A + YL
Sbjct: 96 STVQ------LITQLMPFGCL------LDYVREHKDNIGSQYLLNWCVQIAKGMNYLE-- 141
Query: 640 CKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673
+ +VH DL NVL+ + DFGL + +
Sbjct: 142 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 174
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 63/154 (40%), Gaps = 30/154 (19%)
Query: 535 ATVYKGILDLDQTFIAVKVLFLHQRGAL-----KSFMAECQALRNIRHRNLVKIITACST 589
TVYKG+ + + + V R A K + E + ++ + ++ +++ C T
Sbjct: 36 GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT 95
Query: 590 SDFQGNYFRALVYEFMHHGSLESCPRILSFLRR----------LNIAIDVASALEYLHHH 639
S Q L+ + M G L L ++R LN + +A + YL
Sbjct: 96 STVQ------LITQLMPFGCL------LDYVREHKDNIGSQYLLNWCVQIAKGMNYLE-- 141
Query: 640 CKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673
+ +VH DL NVL+ + DFGL + +
Sbjct: 142 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 174
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 63/154 (40%), Gaps = 30/154 (19%)
Query: 535 ATVYKGILDLDQTFIAVKVLFLHQRGAL-----KSFMAECQALRNIRHRNLVKIITACST 589
TVYKG+ + + + V R A K + E + ++ + ++ +++ C T
Sbjct: 32 GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT 91
Query: 590 SDFQGNYFRALVYEFMHHGSLESCPRILSFLRR----------LNIAIDVASALEYLHHH 639
S Q L+ + M G L L ++R LN + +A + YL
Sbjct: 92 STVQ------LITQLMPFGCL------LDYVREHKDNIGSQYLLNWCVQIAKGMNYLE-- 137
Query: 640 CKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673
+ +VH DL NVL+ + DFGL + +
Sbjct: 138 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 170
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 75/186 (40%), Gaps = 35/186 (18%)
Query: 549 IAVKVL-FLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHH 607
+AVK L ++ F+ E + H+N+V+ I S R ++ E M
Sbjct: 78 VAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVRCIGVSLQS-----LPRFILLELMAG 132
Query: 608 GSLESC----------PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD 657
G L+S P L+ L L++A D+A +YL + +H D+ N LL
Sbjct: 133 GDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLT 189
Query: 658 ---NDMTAHMGDFGLTRFI--PEVMSSNQCSSVGLKG-----------TVGYATPEYGIL 701
A +GDFG+ R I C+ + +K T T +G+L
Sbjct: 190 CPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVL 249
Query: 702 LLEIFT 707
L EIF+
Sbjct: 250 LWEIFS 255
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 76/189 (40%), Gaps = 35/189 (18%)
Query: 575 IRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESCPRILSFLRR--------LNIA 626
+RH N++ I + TS L+ + HGSL FL+R L +A
Sbjct: 59 LRHDNILGFIASDMTSRNSSTQL-WLITHYHEHGSL------YDFLQRQTLEPHLALRLA 111
Query: 627 IDVASALEYLH-----HHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQ 681
+ A L +LH K I H D K NVL+ +++ + D GL VM S
Sbjct: 112 VSAACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLA-----VMHSQG 166
Query: 682 CSSVGLK-----GTVGYATPEYGILLLEIFTG---KRPTSDMFTEGLDLHNFVKMALPDQ 733
+ + GT Y PE +L +I T +D++ GL L + + +
Sbjct: 167 SDYLDIGNNPRVGTKRYMAPE--VLDEQIRTDCFESYKWTDIWAFGLVLWEIARRTIVNG 224
Query: 734 ILQVLDPLF 742
I++ P F
Sbjct: 225 IVEDYRPPF 233
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 64/146 (43%), Gaps = 15/146 (10%)
Query: 561 ALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMH---HGSLESCPRIL 617
AL++ + E + L++ +H N++ I F+ ++ E M H + + ++L
Sbjct: 53 ALRT-LREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVIST--QML 109
Query: 618 SFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVM 677
S A++ LH ++H DLKPSN+L++++ + DFGL R I E
Sbjct: 110 SDDHIQYFIYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESA 166
Query: 678 SSN------QCSSVGLKGTVGYATPE 697
+ N Q T Y PE
Sbjct: 167 ADNSEPTGQQSGMTEXVATRWYRAPE 192
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 78/169 (46%), Gaps = 40/169 (23%)
Query: 571 ALRNIRHRNLVKIITACSTS---DFQGNYFR----ALVYEFMHHGSLESCPRILSFLRRL 623
A+RN R L +++ C++ F G ++ ++ E M GSL+ ++L R+
Sbjct: 46 AIRNQIIREL-QVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLD---QVLKKAGRI 101
Query: 624 ------NIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVM 677
++I V L YL K I+H D+KPSN+L+++ + DFG++ + + M
Sbjct: 102 PEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM 159
Query: 678 SSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRP 711
+++ GT Y +PE G+ L+E+ G+ P
Sbjct: 160 ANS------FVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 68/169 (40%), Gaps = 34/169 (20%)
Query: 565 FMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESC----------P 614
F+ E + H+N+V+ I S R ++ E M G L+S P
Sbjct: 87 FLMEALIISKFNHQNIVRCIGVSLQS-----LPRFILLELMAGGDLKSFLRETRPRPSQP 141
Query: 615 RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD---NDMTAHMGDFGLTR 671
L+ L L++A D+A +YL + +H D+ N LL A +GDFG+ R
Sbjct: 142 SSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 198
Query: 672 FI--PEVMSSNQCSSVGLKG-----------TVGYATPEYGILLLEIFT 707
I C+ + +K T T +G+LL EIF+
Sbjct: 199 DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 63/154 (40%), Gaps = 30/154 (19%)
Query: 535 ATVYKGILDLDQTFIAVKVLFLHQRGAL-----KSFMAECQALRNIRHRNLVKIITACST 589
TVYKG+ + + + V R A K + E + ++ + ++ +++ C T
Sbjct: 29 GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT 88
Query: 590 SDFQGNYFRALVYEFMHHGSLESCPRILSFLRR----------LNIAIDVASALEYLHHH 639
S Q L+ + M G L L ++R LN + +A + YL
Sbjct: 89 STVQ------LITQLMPFGXL------LDYVREHKDNIGSQYLLNWCVQIAKGMNYLE-- 134
Query: 640 CKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673
+ +VH DL NVL+ + DFGL + +
Sbjct: 135 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 63/154 (40%), Gaps = 30/154 (19%)
Query: 535 ATVYKGILDLDQTFIAVKVLFLHQRGAL-----KSFMAECQALRNIRHRNLVKIITACST 589
TVYKG+ + + + V R A K + E + ++ + ++ +++ C T
Sbjct: 32 GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT 91
Query: 590 SDFQGNYFRALVYEFMHHGSLESCPRILSFLRR----------LNIAIDVASALEYLHHH 639
S Q L+ + M G L L ++R LN + +A + YL
Sbjct: 92 STVQ------LITQLMPFGCL------LDYVREHKDNIGSQYLLNWCVQIAKGMNYLE-- 137
Query: 640 CKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673
+ +VH DL NVL+ + DFGL + +
Sbjct: 138 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 170
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 68/170 (40%), Gaps = 34/170 (20%)
Query: 564 SFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESC---------- 613
F+ E + H+N+V+ I S R ++ E M G L+S
Sbjct: 94 DFLMEALIISKFNHQNIVRCIGVSLQS-----LPRFILMELMAGGDLKSFLRETRPRPSQ 148
Query: 614 PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD---NDMTAHMGDFGLT 670
P L+ L L++A D+A +YL + +H D+ N LL A +GDFG+
Sbjct: 149 PSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 205
Query: 671 RFI--PEVMSSNQCSSVGLKG-----------TVGYATPEYGILLLEIFT 707
R I C+ + +K T T +G+LL EIF+
Sbjct: 206 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 63/154 (40%), Gaps = 30/154 (19%)
Query: 535 ATVYKGILDLDQTFIAVKVLFLHQRGAL-----KSFMAECQALRNIRHRNLVKIITACST 589
TVYKG+ + + + V R A K + E + ++ + ++ +++ C T
Sbjct: 32 GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT 91
Query: 590 SDFQGNYFRALVYEFMHHGSLESCPRILSFLRR----------LNIAIDVASALEYLHHH 639
S Q L+ + M G L L ++R LN + +A + YL
Sbjct: 92 STVQ------LITQLMPFGCL------LDYVREHKDNIGSQYLLNWCVQIAKGMNYLE-- 137
Query: 640 CKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673
+ +VH DL NVL+ + DFGL + +
Sbjct: 138 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 170
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 68/170 (40%), Gaps = 34/170 (20%)
Query: 564 SFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESC---------- 613
F+ E + H+N+V+ I S R ++ E M G L+S
Sbjct: 79 DFLMEALIISKFNHQNIVRCIGVSLQS-----LPRFILMELMAGGDLKSFLRETRPRPSQ 133
Query: 614 PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD---NDMTAHMGDFGLT 670
P L+ L L++A D+A +YL + +H D+ N LL A +GDFG+
Sbjct: 134 PSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 190
Query: 671 RFI--PEVMSSNQCSSVGLKG-----------TVGYATPEYGILLLEIFT 707
R I C+ + +K T T +G+LL EIF+
Sbjct: 191 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 64/133 (48%), Gaps = 12/133 (9%)
Query: 568 ECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESCPRILSFLRRLNIAI 627
E + R ++H N+V++ + S +G+++ L+++ + G L + + +
Sbjct: 60 EARICRLLKHPNIVRLHDSISE---EGHHY--LIFDLVTGGELFEDIVAREYYSEADASH 114
Query: 628 DVASALEYLHHHCKKPIVHCDLKPSNVLLDNDM---TAHMGDFGLTRFIPEVMSSNQCSS 684
+ LE + H + +VH +LKP N+LL + + + DFGL EV Q +
Sbjct: 115 CIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLA---IEVEGEQQ-AW 170
Query: 685 VGLKGTVGYATPE 697
G GT GY +PE
Sbjct: 171 FGFAGTPGYLSPE 183
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 63/154 (40%), Gaps = 30/154 (19%)
Query: 535 ATVYKGILDLDQTFIAVKVLFLHQRGAL-----KSFMAECQALRNIRHRNLVKIITACST 589
TVYKG+ + + + V R A K + E + ++ + ++ +++ C T
Sbjct: 35 GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT 94
Query: 590 SDFQGNYFRALVYEFMHHGSLESCPRILSFLRR----------LNIAIDVASALEYLHHH 639
S Q L+ + M G L L ++R LN + +A + YL
Sbjct: 95 STVQ------LITQLMPFGCL------LDYVREHKDNIGSQYLLNWCVQIAKGMNYLE-- 140
Query: 640 CKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673
+ +VH DL NVL+ + DFGL + +
Sbjct: 141 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 173
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 69/165 (41%), Gaps = 27/165 (16%)
Query: 549 IAVKVLFLHQRGALKSFMAECQALRNI--RHRNLVKIITACSTSDFQGNYFR-ALVYEFM 605
+AVK+ + +S+ E + + + RH N++ I A + + G + + LV ++
Sbjct: 29 VAVKIFSSREE---RSWFREAEIYQTVMLRHENILGFIAADNKDN--GTWTQLWLVSDYH 83
Query: 606 HHGSLESCPRILSFLRR--------LNIAIDVASALEYLHHHC-----KKPIVHCDLKPS 652
HGSL +L R + +A+ AS L +LH K I H DLK
Sbjct: 84 EHGSL------FDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSK 137
Query: 653 NVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE 697
N+L+ + T + D GL + + GT Y PE
Sbjct: 138 NILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE 182
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 77/184 (41%), Gaps = 35/184 (19%)
Query: 548 FIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHH 607
+AVK + L ++ + E +R+ +H N+V++ + D +V EF+
Sbjct: 178 LVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELW-----VVMEFLEG 232
Query: 608 GSLESCPRILSFLRR-----LNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTA 662
G+L I++ R + + V AL LH ++H D+K ++LL +D
Sbjct: 233 GALTD---IVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRV 286
Query: 663 HMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT 707
+ DFG F +V S L GT + PE GI+++E+
Sbjct: 287 KLSDFG---FCAQV-SKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVD 342
Query: 708 GKRP 711
G+ P
Sbjct: 343 GEPP 346
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 75/176 (42%), Gaps = 35/176 (19%)
Query: 562 LKSFMAECQALRNI-RHRNLVKIITACSTSD---------FQGN---YFRALVYEFMHHG 608
L ++E + ++ I +H+N++ ++ AC+ +GN Y RA M +
Sbjct: 84 LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYS 143
Query: 609 -SLESCPR-ILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGD 666
+ P ++F ++ +A +EYL + +H DL NVL+ + + D
Sbjct: 144 YDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIAD 200
Query: 667 FGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT 707
FGL R I + + ++ L V + PE +G+L+ EIFT
Sbjct: 201 FGLARDINNIDYYKKTTNGRL--PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 63/154 (40%), Gaps = 30/154 (19%)
Query: 535 ATVYKGILDLDQTFIAVKVLFLHQRGAL-----KSFMAECQALRNIRHRNLVKIITACST 589
TVYKG+ + + + V R A K + E + ++ + ++ +++ C T
Sbjct: 29 GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT 88
Query: 590 SDFQGNYFRALVYEFMHHGSLESCPRILSFLRR----------LNIAIDVASALEYLHHH 639
S Q L+ + M G L L ++R LN + +A + YL
Sbjct: 89 STVQ------LITQLMPFGCL------LDYVREHKDNIGSQYLLNWCVQIAKGMNYLE-- 134
Query: 640 CKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673
+ +VH DL NVL+ + DFGL + +
Sbjct: 135 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 63/154 (40%), Gaps = 30/154 (19%)
Query: 535 ATVYKGILDLDQTFIAVKVLFLHQRGAL-----KSFMAECQALRNIRHRNLVKIITACST 589
TVYKG+ + + + V R A K + E + ++ + ++ +++ C T
Sbjct: 29 GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT 88
Query: 590 SDFQGNYFRALVYEFMHHGSLESCPRILSFLRR----------LNIAIDVASALEYLHHH 639
S Q L+ + M G L L ++R LN + +A + YL
Sbjct: 89 STVQ------LITQLMPFGCL------LDYVREHKDNIGSQYLLNWCVQIAKGMNYLE-- 134
Query: 640 CKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673
+ +VH DL NVL+ + DFGL + +
Sbjct: 135 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 68/169 (40%), Gaps = 34/169 (20%)
Query: 565 FMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESC----------P 614
F+ E + H+N+V+ I S R ++ E M G L+S P
Sbjct: 107 FLMEALIISKFNHQNIVRCIGVSLQS-----LPRFILLELMAGGDLKSFLRETRPRPSQP 161
Query: 615 RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD---NDMTAHMGDFGLTR 671
L+ L L++A D+A +YL + +H D+ N LL A +GDFG+ R
Sbjct: 162 SSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 218
Query: 672 FI--PEVMSSNQCSSVGLKG-----------TVGYATPEYGILLLEIFT 707
I C+ + +K T T +G+LL EIF+
Sbjct: 219 DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 63/154 (40%), Gaps = 30/154 (19%)
Query: 535 ATVYKGILDLDQTFIAVKVLFLHQRGAL-----KSFMAECQALRNIRHRNLVKIITACST 589
TVYKG+ + + + V R A K + E + ++ + ++ +++ C T
Sbjct: 29 GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT 88
Query: 590 SDFQGNYFRALVYEFMHHGSLESCPRILSFLRR----------LNIAIDVASALEYLHHH 639
S Q L+ + M G L L ++R LN + +A + YL
Sbjct: 89 STVQ------LITQLMPFGCL------LDYVREHKDNIGSQYLLNWCVQIAKGMNYLED- 135
Query: 640 CKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673
+ +VH DL NVL+ + DFGL + +
Sbjct: 136 --RRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 63/154 (40%), Gaps = 30/154 (19%)
Query: 535 ATVYKGILDLDQTFIAVKVLFLHQRGAL-----KSFMAECQALRNIRHRNLVKIITACST 589
TVYKG+ + + + V R A K + E + ++ + ++ +++ C T
Sbjct: 39 GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT 98
Query: 590 SDFQGNYFRALVYEFMHHGSLESCPRILSFLRR----------LNIAIDVASALEYLHHH 639
S Q L+ + M G L L ++R LN + +A + YL
Sbjct: 99 STVQ------LITQLMPFGCL------LDYVREHKDNIGSQYLLNWCVQIAKGMNYLE-- 144
Query: 640 CKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673
+ +VH DL NVL+ + DFGL + +
Sbjct: 145 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 177
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 46/96 (47%), Gaps = 18/96 (18%)
Query: 629 VASALEYLHHHCKKPIVHCDLKPSNVLLDN---DMTAHMGDFGLTRFIP-EVMSSNQCSS 684
+ A+ YLH + IVH DLKP N+L D + DFGL++ + +V+ C
Sbjct: 157 ILEAVAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVC-- 211
Query: 685 VGLKGTVGYATPEYGILLLEIFTGKRPTSDMFTEGL 720
GT GY PE +L G P DM++ G+
Sbjct: 212 ----GTPGYCAPE---ILRGCAYG--PEVDMWSVGI 238
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 68/169 (40%), Gaps = 34/169 (20%)
Query: 565 FMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESC----------P 614
F+ E + H+N+V+ I S R ++ E M G L+S P
Sbjct: 98 FLMEALIISKFNHQNIVRCIGVSLQS-----LPRFILLELMAGGDLKSFLRETRPRPSQP 152
Query: 615 RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD---NDMTAHMGDFGLTR 671
L+ L L++A D+A +YL + +H D+ N LL A +GDFG+ R
Sbjct: 153 SSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 209
Query: 672 FIPEV--MSSNQCSSVGLKG-----------TVGYATPEYGILLLEIFT 707
I C+ + +K T T +G+LL EIF+
Sbjct: 210 DIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 68/170 (40%), Gaps = 34/170 (20%)
Query: 564 SFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESC---------- 613
F+ E + H+N+V+ I S R ++ E M G L+S
Sbjct: 79 DFLMEALIISKFNHQNIVRCIGVSLQS-----LPRFILLELMAGGDLKSFLRETRPRPSQ 133
Query: 614 PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD---NDMTAHMGDFGLT 670
P L+ L L++A D+A +YL + +H D+ N LL A +GDFG+
Sbjct: 134 PSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 190
Query: 671 RFI--PEVMSSNQCSSVGLKG-----------TVGYATPEYGILLLEIFT 707
R I C+ + +K T T +G+LL EIF+
Sbjct: 191 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 68/169 (40%), Gaps = 34/169 (20%)
Query: 565 FMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESC----------P 614
F+ E + H+N+V+ I S R ++ E M G L+S P
Sbjct: 81 FLMEALIISKFNHQNIVRCIGVSLQS-----LPRFILLELMAGGDLKSFLRETRPRPSQP 135
Query: 615 RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD---NDMTAHMGDFGLTR 671
L+ L L++A D+A +YL + +H D+ N LL A +GDFG+ R
Sbjct: 136 SSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 192
Query: 672 FI--PEVMSSNQCSSVGLKG-----------TVGYATPEYGILLLEIFT 707
I C+ + +K T T +G+LL EIF+
Sbjct: 193 DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 68/169 (40%), Gaps = 34/169 (20%)
Query: 565 FMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESC----------P 614
F+ E + H+N+V+ I S R ++ E M G L+S P
Sbjct: 97 FLMEALIISKFNHQNIVRCIGVSLQS-----LPRFILLELMAGGDLKSFLRETRPRPSQP 151
Query: 615 RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD---NDMTAHMGDFGLTR 671
L+ L L++A D+A +YL + +H D+ N LL A +GDFG+ R
Sbjct: 152 SSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 208
Query: 672 FI--PEVMSSNQCSSVGLKG-----------TVGYATPEYGILLLEIFT 707
I C+ + +K T T +G+LL EIF+
Sbjct: 209 DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 68/169 (40%), Gaps = 34/169 (20%)
Query: 565 FMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESC----------P 614
F+ E + H+N+V+ I S R ++ E M G L+S P
Sbjct: 121 FLMEALIISKFNHQNIVRCIGVSLQS-----LPRFILLELMAGGDLKSFLRETRPRPSQP 175
Query: 615 RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD---NDMTAHMGDFGLTR 671
L+ L L++A D+A +YL + +H D+ N LL A +GDFG+ R
Sbjct: 176 SSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 232
Query: 672 FIPEV--MSSNQCSSVGLKG-----------TVGYATPEYGILLLEIFT 707
I C+ + +K T T +G+LL EIF+
Sbjct: 233 DIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 86/208 (41%), Gaps = 22/208 (10%)
Query: 549 IAVKVLFLHQRGALKSFMAECQALRNI--RHRNLVKIITACSTSDFQGNYFRALVYEFMH 606
+AVK+ KS+ E + + RH N++ I + TS L+ +
Sbjct: 63 VAVKIFSSRDE---KSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQL-WLITHYHE 118
Query: 607 HGSLESCPRI--LSFLRRLNIAIDVASALEYLH-----HHCKKPIVHCDLKPSNVLLDND 659
GSL ++ L + L I + +AS L +LH K I H DLK N+L+ +
Sbjct: 119 MGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKN 178
Query: 660 MTAHMGDFGLTRFIPEVMSSNQCSSVG---LKGTVGYATPEY--GILLLEIFTGKRPTSD 714
+ D GL + S+NQ VG GT Y PE + ++ F + D
Sbjct: 179 GQCCIADLGLA--VMHSQSTNQL-DVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRV-D 234
Query: 715 MFTEGLDLHNFVKMALPDQILQVLDPLF 742
++ GL L + + + I++ P F
Sbjct: 235 IWAFGLVLWEVARRMVSNGIVEDYKPPF 262
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 69/166 (41%), Gaps = 27/166 (16%)
Query: 565 FMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESC---PRILSFLR 621
F E + ++++ H N++++ F+ N LV E G L R+
Sbjct: 70 FKQEIEIMKSLDHPNIIRLYET-----FEDNTDIYLVMELCTGGELFERVVHKRVFRESD 124
Query: 622 RLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLL---DNDMTAHMGDFGL-TRFIPEVM 677
I DV SA+ Y H K + H DLKP N L D + DFGL RF P M
Sbjct: 125 AARIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM 181
Query: 678 SSNQCSSVGLKGTVGYATPEYGILLLEIFTGKRPTSDMFTEGLDLH 723
+ GT Y +P+ +LE G P D ++ G+ ++
Sbjct: 182 MRTKV------GTPYYVSPQ----VLEGLYG--PECDEWSAGVMMY 215
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 75/176 (42%), Gaps = 35/176 (19%)
Query: 562 LKSFMAECQALRNI-RHRNLVKIITACSTSD---------FQGN---YFRALVYEFMHHG 608
L ++E + ++ I +H+N++ ++ AC+ +GN Y RA M +
Sbjct: 84 LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYS 143
Query: 609 -SLESCPR-ILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGD 666
+ P ++F ++ +A +EYL + +H DL NVL+ + + D
Sbjct: 144 YDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIAD 200
Query: 667 FGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT 707
FGL R I + + ++ L V + PE +G+L+ EIFT
Sbjct: 201 FGLARDINNIDYYKKTTNGRL--PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 92/236 (38%), Gaps = 67/236 (28%)
Query: 528 SYESLVKATVYKGILDLDQTF-IAVKVL----FLHQRGALKSFMAECQALRNIRHRNLVK 582
++ +V+AT Y G++ D +AVK+L L +R AL S + L N H N+V
Sbjct: 58 AFGKVVEATAY-GLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN--HMNIVN 114
Query: 583 IITACSTSDFQGNYFRALVYEFMHHGSLESCPRILSFLRR-------------------- 622
++ AC+ ++ E+ +G L L+FLRR
Sbjct: 115 LLGACTIGGPT-----LVITEYCCYGDL------LNFLRRKRDSFICSKTSPAIMEDDEL 163
Query: 623 -------LNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPE 675
L+ + VA + +L K +H DL N+LL + + DFGL R I
Sbjct: 164 ALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKN 220
Query: 676 VMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDM 715
SN + V + PE YGI L E+F+ G P M
Sbjct: 221 --DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM 274
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 68/170 (40%), Gaps = 34/170 (20%)
Query: 564 SFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESC---------- 613
F+ E + H+N+V+ I S R ++ E M G L+S
Sbjct: 71 DFLMEALIISKFNHQNIVRCIGVSLQS-----LPRFILLELMAGGDLKSFLRETRPRPSQ 125
Query: 614 PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD---NDMTAHMGDFGLT 670
P L+ L L++A D+A +YL + +H D+ N LL A +GDFG+
Sbjct: 126 PSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 182
Query: 671 RFI--PEVMSSNQCSSVGLKG-----------TVGYATPEYGILLLEIFT 707
R I C+ + +K T T +G+LL EIF+
Sbjct: 183 RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 92/236 (38%), Gaps = 67/236 (28%)
Query: 528 SYESLVKATVYKGILDLDQTF-IAVKVL----FLHQRGALKSFMAECQALRNIRHRNLVK 582
++ +V+AT Y G++ D +AVK+L L +R AL S + L N H N+V
Sbjct: 53 AFGKVVEATAY-GLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN--HMNIVN 109
Query: 583 IITACSTSDFQGNYFRALVYEFMHHGSLESCPRILSFLRR-------------------- 622
++ AC+ ++ E+ +G L L+FLRR
Sbjct: 110 LLGACTIGGPT-----LVITEYCCYGDL------LNFLRRKRDSFICSKTSPAIMEDDEL 158
Query: 623 -------LNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPE 675
L+ + VA + +L K +H DL N+LL + + DFGL R I
Sbjct: 159 ALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKN 215
Query: 676 VMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDM 715
SN + V + PE YGI L E+F+ G P M
Sbjct: 216 --DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM 269
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 75/176 (42%), Gaps = 35/176 (19%)
Query: 562 LKSFMAECQALRNI-RHRNLVKIITACSTSD---------FQGN---YFRALVYEFMHHG 608
L ++E + ++ I +H+N++ ++ AC+ +GN Y RA M +
Sbjct: 84 LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYS 143
Query: 609 -SLESCPR-ILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGD 666
+ P ++F ++ +A +EYL + +H DL NVL+ + + D
Sbjct: 144 YDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIAD 200
Query: 667 FGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT 707
FGL R I + + ++ L V + PE +G+L+ EIFT
Sbjct: 201 FGLARDINNIDYYKKTTNGRL--PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 92/236 (38%), Gaps = 67/236 (28%)
Query: 528 SYESLVKATVYKGILDLDQTF-IAVKVL----FLHQRGALKSFMAECQALRNIRHRNLVK 582
++ +V+AT Y G++ D +AVK+L L +R AL S + L N H N+V
Sbjct: 51 AFGKVVEATAY-GLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN--HMNIVN 107
Query: 583 IITACSTSDFQGNYFRALVYEFMHHGSLESCPRILSFLRR-------------------- 622
++ AC+ ++ E+ +G L L+FLRR
Sbjct: 108 LLGACTIGGPT-----LVITEYCCYGDL------LNFLRRKRDSFICSKTSPAIMEDDEL 156
Query: 623 -------LNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPE 675
L+ + VA + +L K +H DL N+LL + + DFGL R I
Sbjct: 157 ALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKN 213
Query: 676 VMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDM 715
SN + V + PE YGI L E+F+ G P M
Sbjct: 214 --DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM 267
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 63/154 (40%), Gaps = 30/154 (19%)
Query: 535 ATVYKGILDLDQTFIAVKVLFLHQRGAL-----KSFMAECQALRNIRHRNLVKIITACST 589
TVYKG+ + + + V R A K + E + ++ + ++ +++ C T
Sbjct: 26 GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT 85
Query: 590 SDFQGNYFRALVYEFMHHGSLESCPRILSFLRR----------LNIAIDVASALEYLHHH 639
S Q L+ + M G L L ++R LN + +A + YL
Sbjct: 86 STVQ------LITQLMPFGCL------LDYVREHKDNIGSQYLLNWCVQIAEGMNYLE-- 131
Query: 640 CKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673
+ +VH DL NVL+ + DFGL + +
Sbjct: 132 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 164
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 69/166 (41%), Gaps = 27/166 (16%)
Query: 565 FMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESC---PRILSFLR 621
F E + ++++ H N++++ F+ N LV E G L R+
Sbjct: 53 FKQEIEIMKSLDHPNIIRLYET-----FEDNTDIYLVMELCTGGELFERVVHKRVFRESD 107
Query: 622 RLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLL---DNDMTAHMGDFGL-TRFIPEVM 677
I DV SA+ Y H K + H DLKP N L D + DFGL RF P M
Sbjct: 108 AARIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM 164
Query: 678 SSNQCSSVGLKGTVGYATPEYGILLLEIFTGKRPTSDMFTEGLDLH 723
+ GT Y +P+ +LE G P D ++ G+ ++
Sbjct: 165 MRTKV------GTPYYVSPQ----VLEGLYG--PECDEWSAGVMMY 198
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 77/184 (41%), Gaps = 35/184 (19%)
Query: 548 FIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHH 607
+AVK + L ++ + E +R+ +H N+V++ + D +V EF+
Sbjct: 56 LVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELW-----VVMEFLEG 110
Query: 608 GSLESCPRILSFLRR-----LNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTA 662
G+L I++ R + + V AL LH ++H D+K ++LL +D
Sbjct: 111 GALTD---IVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRV 164
Query: 663 HMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT 707
+ DFG F +V S L GT + PE GI+++E+
Sbjct: 165 KLSDFG---FCAQV-SKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVD 220
Query: 708 GKRP 711
G+ P
Sbjct: 221 GEPP 224
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 77/184 (41%), Gaps = 35/184 (19%)
Query: 548 FIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHH 607
+AVK + L ++ + E +R+ +H N+V++ + D +V EF+
Sbjct: 101 LVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELW-----VVMEFLEG 155
Query: 608 GSLESCPRILSFLRR-----LNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTA 662
G+L I++ R + + V AL LH ++H D+K ++LL +D
Sbjct: 156 GALTD---IVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRV 209
Query: 663 HMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT 707
+ DFG F +V S L GT + PE GI+++E+
Sbjct: 210 KLSDFG---FCAQV-SKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVD 265
Query: 708 GKRP 711
G+ P
Sbjct: 266 GEPP 269
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 80/184 (43%), Gaps = 37/184 (20%)
Query: 549 IAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHG 608
+AVK++ L ++ + E +R+ +H N+V++ S G L+ EF+ G
Sbjct: 73 VAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYK----SYLVGEELWVLM-EFLQGG 127
Query: 609 SLESCPRILSFLRRLN------IAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTA 662
+L I+S +R LN + V AL YLH + ++H D+K ++LL D
Sbjct: 128 ALTD---IVSQVR-LNEEQIATVCEAVLQALAYLH---AQGVIHRDIKSDSILLTLDGRV 180
Query: 663 HMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPEY---------------GILLLEIFT 707
+ DFG I S + L GT + PE GI+++E+
Sbjct: 181 KLSDFGFCAQI----SKDVPKRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVD 236
Query: 708 GKRP 711
G+ P
Sbjct: 237 GEPP 240
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 92/236 (38%), Gaps = 67/236 (28%)
Query: 528 SYESLVKATVYKGILDLDQTF-IAVKVL----FLHQRGALKSFMAECQALRNIRHRNLVK 582
++ +V+AT Y G++ D +AVK+L L +R AL S + L N H N+V
Sbjct: 35 AFGKVVEATAY-GLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGN--HMNIVN 91
Query: 583 IITACSTSDFQGNYFRALVYEFMHHGSLESCPRILSFLRR-------------------- 622
++ AC+ ++ E+ +G L L+FLRR
Sbjct: 92 LLGACTIGGPT-----LVITEYCCYGDL------LNFLRRKRDSFICSKTSPAIMEDDEL 140
Query: 623 -------LNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPE 675
L+ + VA + +L K +H DL N+LL + + DFGL R I
Sbjct: 141 ALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKN 197
Query: 676 VMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDM 715
SN + V + PE YGI L E+F+ G P M
Sbjct: 198 --DSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGM 251
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 69/171 (40%), Gaps = 17/171 (9%)
Query: 531 SLVKATVYKGI-LDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACST 589
S+V+ V+K L+ I K L + E + R ++H N+V++
Sbjct: 43 SVVRRCVHKTTGLEFAAKIINTKKLSARD---FQKLEREARICRKLQHPNIVRL-----H 94
Query: 590 SDFQGNYFRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDL 649
Q F LV++ + G L F + + + LE + + IVH +L
Sbjct: 95 DSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNL 154
Query: 650 KPSNVLLDND---MTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE 697
KP N+LL + + DFGL EV S G GT GY +PE
Sbjct: 155 KPENLLLASKAKGAAVKLADFGLA---IEVNDSEAWH--GFAGTPGYLSPE 200
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 23/101 (22%)
Query: 628 DVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGL 687
++ ALE+LH K I++ D+K N+LLD++ + DFGL++ E ++ +
Sbjct: 167 EIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSK---EFVADETERAYDF 220
Query: 688 KGTVGYATPE-----------------YGILLLEIFTGKRP 711
GT+ Y P+ G+L+ E+ TG P
Sbjct: 221 CGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASP 261
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 44/102 (43%), Gaps = 26/102 (25%)
Query: 628 DVASALEYLHHHCKKPIVHCDLKPSNVLLD---NDMTAHMGDFGLTRFIPEVMSSNQCSS 684
D++SAL YLH + I+H DLKP N++L + + D G + E+ C+
Sbjct: 130 DISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLG---YAKELDQGELCTE 183
Query: 685 VGLKGTVGYATPE---------------YGILLLEIFTGKRP 711
GT+ Y PE +G L E TG RP
Sbjct: 184 --FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 75/176 (42%), Gaps = 35/176 (19%)
Query: 562 LKSFMAECQALRNI-RHRNLVKIITACSTSD---------FQGN---YFRALVYEFMHHG 608
L ++E + ++ I +H+N++ ++ AC+ +GN Y RA M +
Sbjct: 84 LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYS 143
Query: 609 -SLESCPR-ILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGD 666
+ P ++F ++ +A +EYL + +H DL NVL+ + + D
Sbjct: 144 YDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIAD 200
Query: 667 FGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT 707
FGL R I + + ++ L V + PE +G+L+ EIFT
Sbjct: 201 FGLARDINNIDYYKKTTNGRL--PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 75/176 (42%), Gaps = 35/176 (19%)
Query: 562 LKSFMAECQALRNI-RHRNLVKIITACSTSD---------FQGN---YFRALVYEFMHHG 608
L ++E + ++ I +H+N++ ++ AC+ +GN Y RA M +
Sbjct: 84 LSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYS 143
Query: 609 -SLESCPR-ILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGD 666
+ P ++F ++ +A +EYL + +H DL NVL+ + + D
Sbjct: 144 YDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIAD 200
Query: 667 FGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT 707
FGL R I + + ++ L V + PE +G+L+ EIFT
Sbjct: 201 FGLARDINNIDYYKKTTNGRL--PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 77/184 (41%), Gaps = 35/184 (19%)
Query: 548 FIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHH 607
+AVK + L ++ + E +R+ +H N+V++ + D +V EF+
Sbjct: 58 LVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELW-----VVMEFLEG 112
Query: 608 GSLESCPRILSFLRR-----LNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTA 662
G+L I++ R + + V AL LH ++H D+K ++LL +D
Sbjct: 113 GALTD---IVTHTRMNEEQIAAVCLAVLQALSVLHAQG---VIHRDIKSDSILLTHDGRV 166
Query: 663 HMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT 707
+ DFG F +V S L GT + PE GI+++E+
Sbjct: 167 KLSDFG---FCAQV-SKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVD 222
Query: 708 GKRP 711
G+ P
Sbjct: 223 GEPP 226
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 44/102 (43%), Gaps = 26/102 (25%)
Query: 628 DVASALEYLHHHCKKPIVHCDLKPSNVLLD---NDMTAHMGDFGLTRFIPEVMSSNQCSS 684
D++SAL YLH + I+H DLKP N++L + + D G + E+ C+
Sbjct: 129 DISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLG---YAKELDQGELCTE 182
Query: 685 VGLKGTVGYATPE---------------YGILLLEIFTGKRP 711
GT+ Y PE +G L E TG RP
Sbjct: 183 --FVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 222
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 78/184 (42%), Gaps = 35/184 (19%)
Query: 548 FIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHH 607
+AVK + L ++ + E +R+ +H N+V++ + D +V EF+
Sbjct: 51 LVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELW-----VVMEFLEG 105
Query: 608 GSLESCPRILSFLRR-----LNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTA 662
G+L I++ R + + V AL LH + ++H D+K ++LL +D
Sbjct: 106 GALTD---IVTHTRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRV 159
Query: 663 HMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT 707
+ DFG F +V S L GT + PE GI+++E+
Sbjct: 160 KLSDFG---FCAQV-SKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVD 215
Query: 708 GKRP 711
G+ P
Sbjct: 216 GEPP 219
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 78/184 (42%), Gaps = 35/184 (19%)
Query: 548 FIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHH 607
+AVK + L ++ + E +R+ +H N+V++ + D +V EF+
Sbjct: 47 LVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELW-----VVMEFLEG 101
Query: 608 GSLESCPRILSFLRR-----LNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTA 662
G+L I++ R + + V AL LH + ++H D+K ++LL +D
Sbjct: 102 GALTD---IVTHTRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRV 155
Query: 663 HMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT 707
+ DFG F +V S L GT + PE GI+++E+
Sbjct: 156 KLSDFG---FCAQV-SKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVD 211
Query: 708 GKRP 711
G+ P
Sbjct: 212 GEPP 215
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 76/163 (46%), Gaps = 13/163 (7%)
Query: 519 SRKDLLLNVSYESLVKATVYKGIL-DLDQTFIAVKVLFLHQRGAL---KSFMAECQALRN 574
+R+D++LN VY+G+ + I V V + L + FM+E ++N
Sbjct: 22 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 81
Query: 575 IRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGS-LESCPRILSFLRRLNIAIDVASAL 633
+ H ++VK+I + + + +Y + G LE L L + ++ + A+
Sbjct: 82 LDHPHIVKLI---GIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAM 138
Query: 634 EYLHH-HCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPE 675
YL +C VH D+ N+L+ + +GDFGL+R+I +
Sbjct: 139 AYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYIED 177
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 20/141 (14%)
Query: 563 KSFMAECQALRNIRHRNLVKIIT----ACSTSDFQGNYFRALVYEFMHHG--SLESCPRI 616
K E + L++++H N++ ++ A S +F Y LV M ++ C ++
Sbjct: 71 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQKL 127
Query: 617 LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676
+ I + L+Y+H I+H DLKPSN+ ++ D + DFGL R +
Sbjct: 128 TDDHVQFLI-YQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE 183
Query: 677 MSSNQCSSVGLKGTVGYATPE 697
M+ G T Y PE
Sbjct: 184 MT-------GYVATRWYRAPE 197
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 13/133 (9%)
Query: 568 ECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESCPRILSFLRRLNIAI 627
E + R ++H N+V++ Q F LV++ + G L F + +
Sbjct: 55 EARICRKLQHPNIVRL-----HDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASH 109
Query: 628 DVASALEYLHHHCKKPIVHCDLKPSNVLLDND---MTAHMGDFGLTRFIPEVMSSNQCSS 684
+ LE + + IVH +LKP N+LL + + DFGL + ++ +
Sbjct: 110 CIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA-----IEVNDSEAW 164
Query: 685 VGLKGTVGYATPE 697
G GT GY +PE
Sbjct: 165 HGFAGTPGYLSPE 177
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 86/208 (41%), Gaps = 22/208 (10%)
Query: 549 IAVKVLFLHQRGALKSFMAECQALRNI--RHRNLVKIITACSTSDFQGNYFRALVYEFMH 606
+AVK+ KS+ E + + RH N++ I + TS L+ +
Sbjct: 34 VAVKIFSSRDE---KSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQL-WLITHYHE 89
Query: 607 HGSLESCPRI--LSFLRRLNIAIDVASALEYLH-----HHCKKPIVHCDLKPSNVLLDND 659
GSL ++ L + L I + +AS L +LH K I H DLK N+L+ +
Sbjct: 90 MGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKN 149
Query: 660 MTAHMGDFGLTRFIPEVMSSNQCSSVG---LKGTVGYATPEY--GILLLEIFTGKRPTSD 714
+ D GL + S+NQ VG GT Y PE + ++ F + D
Sbjct: 150 GQCCIADLGLA--VMHSQSTNQL-DVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRV-D 205
Query: 715 MFTEGLDLHNFVKMALPDQILQVLDPLF 742
++ GL L + + + I++ P F
Sbjct: 206 IWAFGLVLWEVARRMVSNGIVEDYKPPF 233
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 26/103 (25%)
Query: 626 AIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTR--FIPEVMSSNQCS 683
A +++ L +LH K+ I++ DLK NV+LD++ + DFG+ + + V + C
Sbjct: 126 AAEISIGLFFLH---KRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFC- 181
Query: 684 SVGLKGTVGYATPE---------------YGILLLEIFTGKRP 711
GT Y PE YG+LL E+ G+ P
Sbjct: 182 -----GTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPP 219
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 76/163 (46%), Gaps = 13/163 (7%)
Query: 519 SRKDLLLNVSYESLVKATVYKGIL-DLDQTFIAVKVLFLHQRGAL---KSFMAECQALRN 574
+R+D++LN VY+G+ + I V V + L + FM+E ++N
Sbjct: 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 69
Query: 575 IRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGS-LESCPRILSFLRRLNIAIDVASAL 633
+ H ++VK+I + + + +Y + G LE L L + ++ + A+
Sbjct: 70 LDHPHIVKLI---GIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAM 126
Query: 634 EYLHH-HCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPE 675
YL +C VH D+ N+L+ + +GDFGL+R+I +
Sbjct: 127 AYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYIED 165
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 75/176 (42%), Gaps = 35/176 (19%)
Query: 562 LKSFMAECQALRNI-RHRNLVKIITACSTSD---------FQGN---YFRALVYEFMHHG 608
L ++E + ++ I +H+N++ ++ AC+ +GN Y RA M +
Sbjct: 84 LSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYS 143
Query: 609 -SLESCPR-ILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGD 666
+ P ++F ++ +A +EYL + +H DL NVL+ + + D
Sbjct: 144 YDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIAD 200
Query: 667 FGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT 707
FGL R I + + ++ L V + PE +G+L+ EIFT
Sbjct: 201 FGLARDINNIDYYKKTTNGRL--PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 75/176 (42%), Gaps = 35/176 (19%)
Query: 562 LKSFMAECQALRNI-RHRNLVKIITACSTSD---------FQGN---YFRALVYEFMHHG 608
L ++E + ++ I +H+N++ ++ AC+ +GN Y RA M +
Sbjct: 73 LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYS 132
Query: 609 -SLESCPR-ILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGD 666
+ P ++F ++ +A +EYL + +H DL NVL+ + + D
Sbjct: 133 YDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIAD 189
Query: 667 FGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT 707
FGL R I + + ++ L V + PE +G+L+ EIFT
Sbjct: 190 FGLARDINNIDYYKKTTNGRL--PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 52/107 (48%), Gaps = 8/107 (7%)
Query: 599 ALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN 658
ALV+E++++ + +IL+ ++ AL+Y H K I+H D+KP NV++D+
Sbjct: 111 ALVFEYINNTDFKQLYQILTDFDIRFYMYELLKALDYCH---SKGIMHRDVKPHNVMIDH 167
Query: 659 DMTA-HMGDFGLTRFIPEVMSSN-QCSSVGLKGT---VGYATPEYGI 700
+ D+GL F N + +S KG V Y +Y +
Sbjct: 168 QQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSL 214
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 81/194 (41%), Gaps = 19/194 (9%)
Query: 563 KSFMAECQALRNI--RHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESCPRI--LS 618
KS+ E + + RH N++ I + TS L+ + GSL ++ L
Sbjct: 45 KSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQL-WLITHYHEMGSLYDYLQLTTLD 103
Query: 619 FLRRLNIAIDVASALEYLH-----HHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673
+ L I + +AS L +LH K I H DLK N+L+ + + D GL +
Sbjct: 104 TVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLA--V 161
Query: 674 PEVMSSNQCSSVG---LKGTVGYATPEY--GILLLEIFTGKRPTSDMFTEGLDLHNFVKM 728
S+NQ VG GT Y PE + ++ F + D++ GL L +
Sbjct: 162 MHSQSTNQL-DVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRV-DIWAFGLVLWEVARR 219
Query: 729 ALPDQILQVLDPLF 742
+ + I++ P F
Sbjct: 220 MVSNGIVEDYKPPF 233
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 52/107 (48%), Gaps = 8/107 (7%)
Query: 599 ALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN 658
ALV+E++++ + +IL+ ++ AL+Y H K I+H D+KP NV++D+
Sbjct: 116 ALVFEYINNTDFKQLYQILTDFDIRFYMYELLKALDYCH---SKGIMHRDVKPHNVMIDH 172
Query: 659 DMTA-HMGDFGLTRFIPEVMSSN-QCSSVGLKGT---VGYATPEYGI 700
+ D+GL F N + +S KG V Y +Y +
Sbjct: 173 QQKKLRLIDWGLAEFYHPAQEYNVRVASRYFKGPELLVDYQMYDYSL 219
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 20/141 (14%)
Query: 563 KSFMAECQALRNIRHRNLVKIIT----ACSTSDFQGNYFRALVYEFMHHG--SLESCPRI 616
K E + L++++H N++ ++ A S +F Y LV M ++ C ++
Sbjct: 71 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQKL 127
Query: 617 LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676
+ I + L+Y+H I+H DLKPSN+ ++ D + DFGL R +
Sbjct: 128 TDDHVQFLI-YQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE 183
Query: 677 MSSNQCSSVGLKGTVGYATPE 697
M+ G T Y PE
Sbjct: 184 MT-------GYVATRWYRAPE 197
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 20/141 (14%)
Query: 563 KSFMAECQALRNIRHRNLVKIIT----ACSTSDFQGNYFRALVYEFMHHG--SLESCPRI 616
K E + L++++H N++ ++ A S +F Y LV M ++ C ++
Sbjct: 77 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQKL 133
Query: 617 LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676
+ I + L+Y+H I+H DLKPSN+ ++ D + DFGL R +
Sbjct: 134 TDDHVQFLI-YQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE 189
Query: 677 MSSNQCSSVGLKGTVGYATPE 697
M+ G T Y PE
Sbjct: 190 MT-------GYVATRWYRAPE 203
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 75/176 (42%), Gaps = 35/176 (19%)
Query: 562 LKSFMAECQALRNI-RHRNLVKIITACSTSD---------FQGN---YFRALVYEFMHHG 608
L ++E + ++ I +H+N++ ++ AC+ +GN Y RA M +
Sbjct: 130 LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYS 189
Query: 609 -SLESCPR-ILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGD 666
+ P ++F ++ +A +EYL + +H DL NVL+ + + D
Sbjct: 190 YDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIAD 246
Query: 667 FGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT 707
FGL R I + + ++ L V + PE +G+L+ EIFT
Sbjct: 247 FGLARDINNIDYYKKTTNGRL--PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 63/154 (40%), Gaps = 30/154 (19%)
Query: 535 ATVYKGILDLDQTFIAVKVLFLHQRGAL-----KSFMAECQALRNIRHRNLVKIITACST 589
TVYKG+ + + + V R A K + E + ++ + ++ +++ C T
Sbjct: 23 GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT 82
Query: 590 SDFQGNYFRALVYEFMHHGSLESCPRILSFLRR----------LNIAIDVASALEYLHHH 639
S Q L+ + M G L L ++R LN + +A + YL
Sbjct: 83 STVQ------LITQLMPFGCL------LDYVREHKDNIGSQYLLNWCVQIAKGMNYLE-- 128
Query: 640 CKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673
+ +VH DL NVL+ + DFGL + +
Sbjct: 129 -DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 161
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 75/176 (42%), Gaps = 35/176 (19%)
Query: 562 LKSFMAECQALRNI-RHRNLVKIITACSTSD---------FQGN---YFRALVYEFMHHG 608
L ++E + ++ I +H+N++ ++ AC+ +GN Y RA M +
Sbjct: 76 LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYS 135
Query: 609 -SLESCPR-ILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGD 666
+ P ++F ++ +A +EYL + +H DL NVL+ + + D
Sbjct: 136 YDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIAD 192
Query: 667 FGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT 707
FGL R I + + ++ L V + PE +G+L+ EIFT
Sbjct: 193 FGLARDINNIDYYKKTTNGRL--PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 75/176 (42%), Gaps = 35/176 (19%)
Query: 562 LKSFMAECQALRNI-RHRNLVKIITACSTSD---------FQGN---YFRALVYEFMHHG 608
L ++E + ++ I +H+N++ ++ AC+ +GN Y RA M +
Sbjct: 71 LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYS 130
Query: 609 -SLESCPR-ILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGD 666
+ P ++F ++ +A +EYL + +H DL NVL+ + + D
Sbjct: 131 YDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIAD 187
Query: 667 FGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT 707
FGL R I + + ++ L V + PE +G+L+ EIFT
Sbjct: 188 FGLARDINNIDYYKKTTNGRL--PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 20/141 (14%)
Query: 563 KSFMAECQALRNIRHRNLVKIIT----ACSTSDFQGNYFRALVYEFMHHG--SLESCPRI 616
K E + L++++H N++ ++ A S +F Y LV M ++ C ++
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQKL 122
Query: 617 LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676
+ I + L+Y+H I+H DLKPSN+ ++ D + DFGL R +
Sbjct: 123 TDDHVQFLI-YQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE 178
Query: 677 MSSNQCSSVGLKGTVGYATPE 697
M+ G T Y PE
Sbjct: 179 MA-------GFVATRWYRAPE 192
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 70/169 (41%), Gaps = 36/169 (21%)
Query: 563 KSFMAECQALRNIRHRNLVKIIT----ACSTSDFQGNYFRALVYEFMHHG--SLESCPRI 616
K E + L++++H N++ ++ A S +F Y LV M ++ C ++
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQKL 122
Query: 617 LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676
+ I + L+Y+H I+H DLKPSN+ ++ D + DFGL R +
Sbjct: 123 TDDHVQFLI-YQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE 178
Query: 677 MSSNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGK 709
M+ G T Y PE G ++ E+ TG+
Sbjct: 179 MA-------GFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 69/157 (43%), Gaps = 19/157 (12%)
Query: 521 KDLLLNVSYESLVKATVYKGIL-------DLDQTFIAVKVLFLHQRGALKSFMAECQALR 573
+DL+ N S ++KG+ L +T + +KVL R +SF +
Sbjct: 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMS 67
Query: 574 NIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESCPR----ILSFLRRLNIAIDV 629
+ H++LV C D LV EF+ GSL++ + ++ L +L +A +
Sbjct: 68 KLSHKHLVLNYGVCFCGDEN-----ILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQL 122
Query: 630 ASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGD 666
A A+ +L + ++H ++ N+LL + G+
Sbjct: 123 AWAMHFLEENT---LIHGNVCAKNILLIREEDRKTGN 156
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 83/201 (41%), Gaps = 43/201 (21%)
Query: 535 ATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQG 594
TVY + +A++ + L Q+ + + E +R ++ N+V + + D
Sbjct: 35 GTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDE-- 92
Query: 595 NYFRALVYEFMHHGSL-----ESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVH 646
+V E++ GSL E+C +I + R + ALE+LH + ++H
Sbjct: 93 ---LWVVMEYLAGGSLTDVVTETCMDEGQIAAVCR------ECLQALEFLHSN---QVIH 140
Query: 647 CDLKPSNVLLDNDMTAHMGDFGL-TRFIPEVMSSNQCSSVGLKGTVGYATPEY------- 698
++K N+LL D + + DFG + PE Q + GT + PE
Sbjct: 141 RNIKSDNILLGMDGSVKLTDFGFCAQITPE-----QSKRSTMVGTPYWMAPEVVTRKAYG 195
Query: 699 --------GILLLEIFTGKRP 711
GI+ +E+ G+ P
Sbjct: 196 PKVDIWSLGIMAIEMIEGEPP 216
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 76/163 (46%), Gaps = 13/163 (7%)
Query: 519 SRKDLLLNVSYESLVKATVYKGIL-DLDQTFIAVKVLFLHQRGAL---KSFMAECQALRN 574
+R+D++LN VY+G+ + I V V + L + FM+E ++N
Sbjct: 6 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 65
Query: 575 IRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGS-LESCPRILSFLRRLNIAIDVASAL 633
+ H ++VK+I + + + +Y + G LE L L + ++ + A+
Sbjct: 66 LDHPHIVKLI---GIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAM 122
Query: 634 EYLHH-HCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPE 675
YL +C VH D+ N+L+ + +GDFGL+R+I +
Sbjct: 123 AYLESINC----VHRDIAVRNILVASPECVKLGDFGLSRYIED 161
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 70/169 (41%), Gaps = 36/169 (21%)
Query: 563 KSFMAECQALRNIRHRNLVKIIT----ACSTSDFQGNYFRALVYEFMHHG--SLESCPRI 616
K E + L++++H N++ ++ A S +F Y LV M ++ C ++
Sbjct: 95 KRTYRELRLLKHMKHENVIGLLDVFTPATSLEEFNDVY---LVTHLMGADLNNIVKCQKL 151
Query: 617 LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676
+ I + L+Y+H I+H DLKPSN+ ++ D + DFGL R +
Sbjct: 152 TDDHVQFLI-YQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE 207
Query: 677 MSSNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGK 709
M+ G T Y PE G ++ E+ TG+
Sbjct: 208 MT-------GYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 70/169 (41%), Gaps = 36/169 (21%)
Query: 563 KSFMAECQALRNIRHRNLVKIIT----ACSTSDFQGNYFRALVYEFMHHG--SLESCPRI 616
K E + L++++H N++ ++ A S +F Y LV M ++ C ++
Sbjct: 73 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQKL 129
Query: 617 LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676
+ I + L+Y+H I+H DLKPSN+ ++ D + DFGL R +
Sbjct: 130 TDDHVQFLI-YQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE 185
Query: 677 MSSNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGK 709
M+ G T Y PE G ++ E+ TG+
Sbjct: 186 MT-------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 20/141 (14%)
Query: 563 KSFMAECQALRNIRHRNLVKIIT----ACSTSDFQGNYFRALVYEFMHHG--SLESCPRI 616
K E + L++++H N++ ++ A S +F Y LV M ++ C ++
Sbjct: 73 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQKL 129
Query: 617 LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676
+ I + L+Y+H I+H DLKPSN+ ++ D + DFGL R +
Sbjct: 130 TDDHVQFLI-YQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE 185
Query: 677 MSSNQCSSVGLKGTVGYATPE 697
M+ G T Y PE
Sbjct: 186 MT-------GYVATRWYRAPE 199
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 20/141 (14%)
Query: 563 KSFMAECQALRNIRHRNLVKIIT----ACSTSDFQGNYFRALVYEFMHHG--SLESCPRI 616
K E + L++++H N++ ++ A S +F Y LV M ++ C ++
Sbjct: 73 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQKL 129
Query: 617 LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676
+ I + L+Y+H I+H DLKPSN+ ++ D + DFGL R +
Sbjct: 130 TDDHVQFLI-YQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE 185
Query: 677 MSSNQCSSVGLKGTVGYATPE 697
M+ G T Y PE
Sbjct: 186 MT-------GYVATRWYRAPE 199
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 20/141 (14%)
Query: 563 KSFMAECQALRNIRHRNLVKIIT----ACSTSDFQGNYFRALVYEFMHHG--SLESCPRI 616
K E + L++++H N++ ++ A S +F Y LV M ++ C ++
Sbjct: 62 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQKL 118
Query: 617 LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676
+ I + L+Y+H I+H DLKPSN+ ++ D + DFGL R +
Sbjct: 119 TDDHVQFLI-YQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE 174
Query: 677 MSSNQCSSVGLKGTVGYATPE 697
M+ G T Y PE
Sbjct: 175 MA-------GFVATRWYRAPE 188
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 70/169 (41%), Gaps = 36/169 (21%)
Query: 563 KSFMAECQALRNIRHRNLVKIIT----ACSTSDFQGNYFRALVYEFMHHG--SLESCPRI 616
K E + L++++H N++ ++ A S +F Y LV M ++ C ++
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQKL 122
Query: 617 LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676
+ I + L+Y+H I+H DLKPSN+ ++ D + DFGL R +
Sbjct: 123 TDDHVQFLI-YQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE 178
Query: 677 MSSNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGK 709
M+ G T Y PE G ++ E+ TG+
Sbjct: 179 MT-------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 50/115 (43%), Gaps = 27/115 (23%)
Query: 624 NIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCS 683
+ + + AL YL K ++H D+KPSN+LLD + DFG++ + + + ++ +
Sbjct: 128 KMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSA 185
Query: 684 SVGLKGTVGYATPEY--------------------GILLLEIFTGKRPTSDMFTE 718
G Y PE GI L+E+ TG+ P + T+
Sbjct: 186 -----GCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTD 235
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 74/176 (42%), Gaps = 35/176 (19%)
Query: 562 LKSFMAECQALRNI-RHRNLVKIITACSTSD---------FQGN---YFRALVYEFMHHG 608
L ++E + ++ I +H+N++ ++ AC+ +GN Y RA M +
Sbjct: 84 LSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYS 143
Query: 609 -SLESCPR-ILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGD 666
+ P ++F ++ +A +EYL + +H DL NVL+ + + D
Sbjct: 144 YDINRVPEEQMTFKDLVSCTYQLARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIAD 200
Query: 667 FGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT 707
FGL R I + ++ L V + PE +G+L+ EIFT
Sbjct: 201 FGLARDINNIDYYKNTTNGRL--PVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 20/141 (14%)
Query: 563 KSFMAECQALRNIRHRNLVKIIT----ACSTSDFQGNYFRALVYEFMHHG--SLESCPRI 616
K E + L++++H N++ ++ A S +F Y LV M ++ C ++
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQKL 122
Query: 617 LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676
+ I + L+Y+H I+H DLKPSN+ ++ D + DFGL R +
Sbjct: 123 TDDHVQFLI-YQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE 178
Query: 677 MSSNQCSSVGLKGTVGYATPE 697
M+ G T Y PE
Sbjct: 179 MT-------GYVATRWYRAPE 192
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 20/141 (14%)
Query: 563 KSFMAECQALRNIRHRNLVKIIT----ACSTSDFQGNYFRALVYEFMHHG--SLESCPRI 616
K E + L++++H N++ ++ A S +F Y LV M ++ C ++
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQKL 122
Query: 617 LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676
+ I + L+Y+H I+H DLKPSN+ ++ D + DFGL R +
Sbjct: 123 TDDHVQFLI-YQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE 178
Query: 677 MSSNQCSSVGLKGTVGYATPE 697
M+ G T Y PE
Sbjct: 179 MT-------GYVATRWYRAPE 192
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 20/141 (14%)
Query: 563 KSFMAECQALRNIRHRNLVKIIT----ACSTSDFQGNYFRALVYEFMHHG--SLESCPRI 616
K E + L++++H N++ ++ A S +F Y LV M ++ C ++
Sbjct: 68 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQKL 124
Query: 617 LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676
+ I + L+Y+H I+H DLKPSN+ ++ D + DFGL R +
Sbjct: 125 TDDHVQFLI-YQILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDE 180
Query: 677 MSSNQCSSVGLKGTVGYATPE 697
M+ G T Y PE
Sbjct: 181 MT-------GYVATRWYRAPE 194
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 20/141 (14%)
Query: 563 KSFMAECQALRNIRHRNLVKIIT----ACSTSDFQGNYFRALVYEFMHHG--SLESCPRI 616
K E + L++++H N++ ++ A S +F Y LV M ++ C ++
Sbjct: 77 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQKL 133
Query: 617 LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676
+ I + L+Y+H I+H DLKPSN+ ++ D + DFGL R +
Sbjct: 134 TDDHVQFLI-YQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE 189
Query: 677 MSSNQCSSVGLKGTVGYATPE 697
M+ G T Y PE
Sbjct: 190 MT-------GYVATRWYRAPE 203
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 20/141 (14%)
Query: 563 KSFMAECQALRNIRHRNLVKIIT----ACSTSDFQGNYFRALVYEFMHHG--SLESCPRI 616
K E + L++++H N++ ++ A S +F Y LV M ++ C ++
Sbjct: 71 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQKL 127
Query: 617 LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676
+ I + L+Y+H I+H DLKPSN+ ++ D + DFGL R +
Sbjct: 128 TDDHVQFLI-YQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE 183
Query: 677 MSSNQCSSVGLKGTVGYATPE 697
M+ G T Y PE
Sbjct: 184 MT-------GYVATRWYRAPE 197
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 20/141 (14%)
Query: 563 KSFMAECQALRNIRHRNLVKIIT----ACSTSDFQGNYFRALVYEFMHHG--SLESCPRI 616
K E + L++++H N++ ++ A S +F Y LV M ++ C ++
Sbjct: 68 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQKL 124
Query: 617 LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676
+ I + L+Y+H I+H DLKPSN+ ++ D + DFGL R +
Sbjct: 125 TDDHVQFLI-YQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE 180
Query: 677 MSSNQCSSVGLKGTVGYATPE 697
M+ G T Y PE
Sbjct: 181 MT-------GYVATRWYRAPE 194
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 20/141 (14%)
Query: 563 KSFMAECQALRNIRHRNLVKIIT----ACSTSDFQGNYFRALVYEFMHHG--SLESCPRI 616
K E + L++++H N++ ++ A S +F Y LV M ++ C ++
Sbjct: 68 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQKL 124
Query: 617 LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676
+ I + L+Y+H I+H DLKPSN+ ++ D + DFGL R +
Sbjct: 125 TDDHVQFLI-YQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE 180
Query: 677 MSSNQCSSVGLKGTVGYATPE 697
M+ G T Y PE
Sbjct: 181 MT-------GYVATRWYRAPE 194
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 20/141 (14%)
Query: 563 KSFMAECQALRNIRHRNLVKIIT----ACSTSDFQGNYFRALVYEFMHHG--SLESCPRI 616
K E + L++++H N++ ++ A S +F Y LV M ++ C ++
Sbjct: 65 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQKL 121
Query: 617 LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676
+ I + L+Y+H I+H DLKPSN+ ++ D + DFGL R +
Sbjct: 122 TDDHVQFLI-YQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE 177
Query: 677 MSSNQCSSVGLKGTVGYATPE 697
M+ G T Y PE
Sbjct: 178 MT-------GYVATRWYRAPE 191
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 20/141 (14%)
Query: 563 KSFMAECQALRNIRHRNLVKIIT----ACSTSDFQGNYFRALVYEFMHHG--SLESCPRI 616
K E + L++++H N++ ++ A S +F Y LV M ++ C ++
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQKL 122
Query: 617 LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676
+ I + L+Y+H I+H DLKPSN+ ++ D + DFGL R +
Sbjct: 123 TDDHVQFLI-YQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE 178
Query: 677 MSSNQCSSVGLKGTVGYATPE 697
M+ G T Y PE
Sbjct: 179 MT-------GYVATRWYRAPE 192
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 70/169 (41%), Gaps = 36/169 (21%)
Query: 563 KSFMAECQALRNIRHRNLVKIIT----ACSTSDFQGNYFRALVYEFMHHG--SLESCPRI 616
K E + L++++H N++ ++ A S +F Y LV M ++ C ++
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQKL 122
Query: 617 LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676
+ I + L+Y+H I+H DLKPSN+ ++ D + DFGL R +
Sbjct: 123 TDDHVQFLI-YQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE 178
Query: 677 MSSNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGK 709
M+ G T Y PE G ++ E+ TG+
Sbjct: 179 MT-------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 13/133 (9%)
Query: 568 ECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESCPRILSFLRRLNIAI 627
E + R ++H N+V++ Q F LV++ + G L F + +
Sbjct: 55 EARICRKLQHPNIVRL-----HDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASH 109
Query: 628 DVASALEYLHHHCKKPIVHCDLKPSNVLLDND---MTAHMGDFGLTRFIPEVMSSNQCSS 684
+ LE + + IVH +LKP N+LL + + DFGL + ++ +
Sbjct: 110 CIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA-----IEVNDSEAW 164
Query: 685 VGLKGTVGYATPE 697
G GT GY +PE
Sbjct: 165 HGFAGTPGYLSPE 177
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 20/141 (14%)
Query: 563 KSFMAECQALRNIRHRNLVKIIT----ACSTSDFQGNYFRALVYEFMHHG--SLESCPRI 616
K E + L++++H N++ ++ A S +F Y LV M ++ C ++
Sbjct: 78 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQKL 134
Query: 617 LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676
+ I + L+Y+H I+H DLKPSN+ ++ D + DFGL R +
Sbjct: 135 TDDHVQFLI-YQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE 190
Query: 677 MSSNQCSSVGLKGTVGYATPE 697
M+ G T Y PE
Sbjct: 191 MT-------GYVATRWYRAPE 204
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 20/141 (14%)
Query: 563 KSFMAECQALRNIRHRNLVKIIT----ACSTSDFQGNYFRALVYEFMHHG--SLESCPRI 616
K E + L++++H N++ ++ A S +F Y LV M ++ C ++
Sbjct: 78 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQKL 134
Query: 617 LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676
+ I + L+Y+H I+H DLKPSN+ ++ D + DFGL R +
Sbjct: 135 TDDHVQFLI-YQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE 190
Query: 677 MSSNQCSSVGLKGTVGYATPE 697
M+ G T Y PE
Sbjct: 191 MT-------GYVATRWYRAPE 204
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 20/141 (14%)
Query: 563 KSFMAECQALRNIRHRNLVKIIT----ACSTSDFQGNYFRALVYEFMHHG--SLESCPRI 616
K E + L++++H N++ ++ A S +F Y LV M ++ C ++
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQKL 122
Query: 617 LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676
+ I + L+Y+H I+H DLKPSN+ ++ D + DFGL R +
Sbjct: 123 TDDHVQFLI-YQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE 178
Query: 677 MSSNQCSSVGLKGTVGYATPE 697
M+ G T Y PE
Sbjct: 179 MT-------GYVATRWYRAPE 192
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 20/141 (14%)
Query: 563 KSFMAECQALRNIRHRNLVKIIT----ACSTSDFQGNYFRALVYEFMHHG--SLESCPRI 616
K E + L++++H N++ ++ A S +F Y LV M ++ C ++
Sbjct: 76 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQKL 132
Query: 617 LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676
+ I + L+Y+H I+H DLKPSN+ ++ D + DFGL R +
Sbjct: 133 TDDHVQFLI-YQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE 188
Query: 677 MSSNQCSSVGLKGTVGYATPE 697
M+ G T Y PE
Sbjct: 189 MT-------GYVATRWYRAPE 202
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 20/141 (14%)
Query: 563 KSFMAECQALRNIRHRNLVKIIT----ACSTSDFQGNYFRALVYEFMHHG--SLESCPRI 616
K E + L++++H N++ ++ A S +F Y LV M ++ C ++
Sbjct: 63 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQKL 119
Query: 617 LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676
+ I + L+Y+H I+H DLKPSN+ ++ D + DFGL R +
Sbjct: 120 TDDHVQFLI-YQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE 175
Query: 677 MSSNQCSSVGLKGTVGYATPE 697
M+ G T Y PE
Sbjct: 176 MT-------GYVATRWYRAPE 189
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 57/133 (42%), Gaps = 13/133 (9%)
Query: 568 ECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESCPRILSFLRRLNIAI 627
E + R ++H N+V++ Q F LV++ + G L F + +
Sbjct: 54 EARICRKLQHPNIVRL-----HDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASH 108
Query: 628 DVASALEYLHHHCKKPIVHCDLKPSNVLLDND---MTAHMGDFGLTRFIPEVMSSNQCSS 684
+ LE + + IVH +LKP N+LL + + DFGL + ++ +
Sbjct: 109 CIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLA-----IEVNDSEAW 163
Query: 685 VGLKGTVGYATPE 697
G GT GY +PE
Sbjct: 164 HGFAGTPGYLSPE 176
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 20/141 (14%)
Query: 563 KSFMAECQALRNIRHRNLVKIIT----ACSTSDFQGNYFRALVYEFMHHG--SLESCPRI 616
K E + L++++H N++ ++ A S +F Y LV M ++ C ++
Sbjct: 78 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQKL 134
Query: 617 LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676
+ I + L+Y+H I+H DLKPSN+ ++ D + DFGL R +
Sbjct: 135 TDDHVQFLI-YQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE 190
Query: 677 MSSNQCSSVGLKGTVGYATPE 697
M+ G T Y PE
Sbjct: 191 MT-------GYVATRWYRAPE 204
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 20/141 (14%)
Query: 563 KSFMAECQALRNIRHRNLVKIIT----ACSTSDFQGNYFRALVYEFMHHG--SLESCPRI 616
K E + L++++H N++ ++ A S +F Y LV M ++ C ++
Sbjct: 85 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQKL 141
Query: 617 LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676
+ I + L+Y+H I+H DLKPSN+ ++ D + DFGL R +
Sbjct: 142 TDDHVQFLI-YQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE 197
Query: 677 MSSNQCSSVGLKGTVGYATPE 697
M+ G T Y PE
Sbjct: 198 MT-------GYVATRWYRAPE 211
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 20/141 (14%)
Query: 563 KSFMAECQALRNIRHRNLVKIIT----ACSTSDFQGNYFRALVYEFMHHG--SLESCPRI 616
K E + L++++H N++ ++ A S +F Y LV M ++ C ++
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQKL 122
Query: 617 LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676
+ I + L+Y+H I+H DLKPSN+ ++ D + DFGL R +
Sbjct: 123 TDDHVQFLI-YQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE 178
Query: 677 MSSNQCSSVGLKGTVGYATPE 697
M+ G T Y PE
Sbjct: 179 MT-------GYVATRWYRAPE 192
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 20/141 (14%)
Query: 563 KSFMAECQALRNIRHRNLVKIIT----ACSTSDFQGNYFRALVYEFMHHG--SLESCPRI 616
K E + L++++H N++ ++ A S +F Y LV M ++ C ++
Sbjct: 72 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQKL 128
Query: 617 LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676
+ I + L+Y+H I+H DLKPSN+ ++ D + DFGL R +
Sbjct: 129 TDDHVQFLI-YQILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDE 184
Query: 677 MSSNQCSSVGLKGTVGYATPE 697
M+ G T Y PE
Sbjct: 185 MT-------GYVATRWYRAPE 198
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 20/141 (14%)
Query: 563 KSFMAECQALRNIRHRNLVKIIT----ACSTSDFQGNYFRALVYEFMHHG--SLESCPRI 616
K E + L++++H N++ ++ A S +F Y LV M ++ C ++
Sbjct: 72 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQKL 128
Query: 617 LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676
+ I + L+Y+H I+H DLKPSN+ ++ D + DFGL R +
Sbjct: 129 TDDHVQFLI-YQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE 184
Query: 677 MSSNQCSSVGLKGTVGYATPE 697
M+ G T Y PE
Sbjct: 185 MT-------GYVATRWYRAPE 198
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 20/141 (14%)
Query: 563 KSFMAECQALRNIRHRNLVKIIT----ACSTSDFQGNYFRALVYEFMHHG--SLESCPRI 616
K E + L++++H N++ ++ A S +F Y LV M ++ C ++
Sbjct: 73 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQKL 129
Query: 617 LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676
+ I + L+Y+H I+H DLKPSN+ ++ D + DFGL R +
Sbjct: 130 TDDHVQFLI-YQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE 185
Query: 677 MSSNQCSSVGLKGTVGYATPE 697
M+ G T Y PE
Sbjct: 186 MT-------GYVATRWYRAPE 199
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 20/141 (14%)
Query: 563 KSFMAECQALRNIRHRNLVKIIT----ACSTSDFQGNYFRALVYEFMHHG--SLESCPRI 616
K E + L++++H N++ ++ A S +F Y LV M ++ C ++
Sbjct: 63 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQKL 119
Query: 617 LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676
+ I + L+Y+H I+H DLKPSN+ ++ D + DFGL R +
Sbjct: 120 TDDHVQFLI-YQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE 175
Query: 677 MSSNQCSSVGLKGTVGYATPE 697
M+ G T Y PE
Sbjct: 176 MT-------GYVATRWYRAPE 189
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 20/141 (14%)
Query: 563 KSFMAECQALRNIRHRNLVKIIT----ACSTSDFQGNYFRALVYEFMHHG--SLESCPRI 616
K E + L++++H N++ ++ A S +F Y LV M ++ C ++
Sbjct: 68 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQKL 124
Query: 617 LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676
+ I + L+Y+H I+H DLKPSN+ ++ D + DFGL R +
Sbjct: 125 TDDHVQFLI-YQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE 180
Query: 677 MSSNQCSSVGLKGTVGYATPE 697
M+ G T Y PE
Sbjct: 181 MT-------GYVATRWYRAPE 194
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 20/141 (14%)
Query: 563 KSFMAECQALRNIRHRNLVKIIT----ACSTSDFQGNYFRALVYEFMHHG--SLESCPRI 616
K E + L++++H N++ ++ A S +F Y LV M ++ C ++
Sbjct: 71 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQKL 127
Query: 617 LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676
+ I + L+Y+H I+H DLKPSN+ ++ D + DFGL R +
Sbjct: 128 TDDHVQFLI-YQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE 183
Query: 677 MSSNQCSSVGLKGTVGYATPE 697
M+ G T Y PE
Sbjct: 184 MT-------GYVATRWYRAPE 197
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 20/141 (14%)
Query: 563 KSFMAECQALRNIRHRNLVKIIT----ACSTSDFQGNYFRALVYEFMHHG--SLESCPRI 616
K E + L++++H N++ ++ A S +F Y LV M ++ C ++
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQKL 122
Query: 617 LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676
+ I + L+Y+H I+H DLKPSN+ ++ D + DFGL R +
Sbjct: 123 TDDHVQFLI-YQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE 178
Query: 677 MSSNQCSSVGLKGTVGYATPE 697
M+ G T Y PE
Sbjct: 179 MT-------GYVATRWYRAPE 192
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 624 NIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSN 680
IA+ + ALE+LH K ++H D+KPSNVL++ DFG++ ++ + ++ +
Sbjct: 140 KIAVSIVKALEHLH--SKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKD 194
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 94/231 (40%), Gaps = 25/231 (10%)
Query: 515 SESSSRKDLLLNVSYESLVKATVYKGILDLDQTFIAVKVL----FLHQRGALKSFMAECQ 570
S+S+S LL+ A V++G A+KV FL + M E +
Sbjct: 3 SQSTSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLR---PVDVQMREFE 59
Query: 571 ALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESC---PRILSFLRRLNIAI 627
L+ + H+N+VK+ + + + L+ EF GSL + P L I
Sbjct: 60 VLKKLNHKNIVKLF---AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLI 116
Query: 628 DVASALEYLHHHCKKPIVHCDLKPSNVLL----DNDMTAHMGDFGLTRFIPEVMSSNQCS 683
+ + ++H + IVH ++KP N++ D + DFG R E+ Q
Sbjct: 117 VLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR---ELEDDEQF- 172
Query: 684 SVGLKGTVGYATP---EYGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALP 731
V L GT Y P E +L + T D+++ G+ ++ +LP
Sbjct: 173 -VXLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 20/141 (14%)
Query: 563 KSFMAECQALRNIRHRNLVKIIT----ACSTSDFQGNYFRALVYEFMHHG--SLESCPRI 616
K E + L++++H N++ ++ A S +F Y LV M ++ C ++
Sbjct: 62 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY---LVTHLMGADLNNIVKCAKL 118
Query: 617 LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676
+ I + L+Y+H I+H DLKPSN+ ++ D + DFGL R +
Sbjct: 119 TDDHVQFLI-YQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE 174
Query: 677 MSSNQCSSVGLKGTVGYATPE 697
M+ G T Y PE
Sbjct: 175 MT-------GYVATRWYRAPE 188
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 20/141 (14%)
Query: 563 KSFMAECQALRNIRHRNLVKIIT----ACSTSDFQGNYFRALVYEFMHHG--SLESCPRI 616
K E + L++++H N++ ++ A S +F Y LV M ++ C ++
Sbjct: 85 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQKL 141
Query: 617 LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676
+ I + L+Y+H I+H DLKPSN+ ++ D + DFGL R +
Sbjct: 142 TDDHVQFLI-YQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE 197
Query: 677 MSSNQCSSVGLKGTVGYATPE 697
M+ G T Y PE
Sbjct: 198 MT-------GYVATRWYRAPE 211
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 20/141 (14%)
Query: 563 KSFMAECQALRNIRHRNLVKIIT----ACSTSDFQGNYFRALVYEFMHHG--SLESCPRI 616
K E + L++++H N++ ++ A S +F Y LV M ++ C ++
Sbjct: 86 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQKL 142
Query: 617 LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676
+ I + L+Y+H I+H DLKPSN+ ++ D + DFGL R +
Sbjct: 143 TDDHVQFLI-YQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE 198
Query: 677 MSSNQCSSVGLKGTVGYATPE 697
M+ G T Y PE
Sbjct: 199 MT-------GYVATRWYRAPE 212
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 71/155 (45%), Gaps = 21/155 (13%)
Query: 570 QALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLE-SCPRILSFLRRLNIAID 628
Q L + H ++V+I +D G+ +V E++ SL+ S + L + ++
Sbjct: 131 QFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSLKRSKGQKLPVAEAIAYLLE 190
Query: 629 VASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVG-L 687
+ AL YLH +V+ DLKP N++L + + D G + ++ +S G L
Sbjct: 191 ILPALSYLHSIG---LVYNDLKPENIMLTEEQLKLI-DLG---------AVSRINSFGYL 237
Query: 688 KGTVGYATPEYGILLLEIFTGKRPTSDMFTEGLDL 722
GT G+ PE + TG +D++T G L
Sbjct: 238 YGTPGFQAPEI------VRTGPTVATDIYTVGRTL 266
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 100/254 (39%), Gaps = 58/254 (22%)
Query: 511 TVTSSESSSRKDLLLNVSYES--------LVKAT---VYKGILDLDQTFIAVKVLFLHQR 559
++ S+E + LL YE L K T VY G +Q IA+K +
Sbjct: 1 SMRSTEEGDCESDLLEYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDS 60
Query: 560 GALKSFMAECQALRNIRHRNLVKIITACSTSDF--------QGNYFRALVYEFMHHGSLE 611
+ E ++++H+N+V+ + + S + F G AL+ G L+
Sbjct: 61 RYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRS--KWGPLK 118
Query: 612 SCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN-DMTAHMGDFGLT 670
+ + F + + L+YLH + IVH D+K NVL++ + DFG +
Sbjct: 119 DNEQTIGFYTK-----QILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTS 170
Query: 671 RFIPEVMSSNQCSSVGLKGTVGYATPEY-----------------GILLLEIFTGK---- 709
+ + + N C+ GT+ Y PE G ++E+ TGK
Sbjct: 171 KRLAGI---NPCTET-FTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFY 226
Query: 710 ---RPTSDMFTEGL 720
P + MF G+
Sbjct: 227 ELGEPQAAMFKVGM 240
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 20/141 (14%)
Query: 563 KSFMAECQALRNIRHRNLVKIIT----ACSTSDFQGNYFRALVYEFMHHG--SLESCPRI 616
K E + L++++H N++ ++ A S +F Y LV M ++ C ++
Sbjct: 86 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQKL 142
Query: 617 LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676
+ I + L+Y+H I+H DLKPSN+ ++ D + DFGL R +
Sbjct: 143 TDDHVQFLI-YQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE 198
Query: 677 MSSNQCSSVGLKGTVGYATPE 697
M+ G T Y PE
Sbjct: 199 MT-------GYVATRWYRAPE 212
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 20/141 (14%)
Query: 563 KSFMAECQALRNIRHRNLVKIIT----ACSTSDFQGNYFRALVYEFMHHG--SLESCPRI 616
K E + L++++H N++ ++ A S +F Y LV M ++ C ++
Sbjct: 62 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQKL 118
Query: 617 LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676
+ I + L+Y+H I+H DLKPSN+ ++ D + DFGL R +
Sbjct: 119 TDDHVQFLI-YQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE 174
Query: 677 MSSNQCSSVGLKGTVGYATPE 697
M+ G T Y PE
Sbjct: 175 MT-------GYVATRWYRAPE 188
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 20/141 (14%)
Query: 563 KSFMAECQALRNIRHRNLVKIIT----ACSTSDFQGNYFRALVYEFMHHG--SLESCPRI 616
K E + L++++H N++ ++ A S +F Y LV M ++ C ++
Sbjct: 89 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQKL 145
Query: 617 LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676
+ I + L+Y+H I+H DLKPSN+ ++ D + DFGL R +
Sbjct: 146 TDDHVQFLI-YQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE 201
Query: 677 MSSNQCSSVGLKGTVGYATPE 697
M+ G T Y PE
Sbjct: 202 MT-------GYVATRWYRAPE 215
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 20/141 (14%)
Query: 563 KSFMAECQALRNIRHRNLVKIIT----ACSTSDFQGNYFRALVYEFMHHG--SLESCPRI 616
K E + L++++H N++ ++ A S +F Y LV M ++ C ++
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQKL 122
Query: 617 LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676
+ I + L+Y+H I+H DLKPSN+ ++ D + DFGL R +
Sbjct: 123 TDDHVQFLI-YQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE 178
Query: 677 MSSNQCSSVGLKGTVGYATPE 697
M+ G T Y PE
Sbjct: 179 MT-------GYVATRWYRAPE 192
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 20/141 (14%)
Query: 563 KSFMAECQALRNIRHRNLVKIIT----ACSTSDFQGNYFRALVYEFMHHG--SLESCPRI 616
K E + L++++H N++ ++ A S +F Y LV M ++ C ++
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQKL 122
Query: 617 LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676
+ I + L+Y+H I+H DLKPSN+ ++ D + DFGL R +
Sbjct: 123 TDDHVQFLI-YQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE 178
Query: 677 MSSNQCSSVGLKGTVGYATPE 697
M+ G T Y PE
Sbjct: 179 MT-------GXVATRWYRAPE 192
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 20/141 (14%)
Query: 563 KSFMAECQALRNIRHRNLVKIIT----ACSTSDFQGNYFRALVYEFMHHG--SLESCPRI 616
K E + L++++H N++ ++ A S +F Y LV M ++ C ++
Sbjct: 64 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQKL 120
Query: 617 LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676
+ I + L+Y+H I+H DLKPSN+ ++ D + DFGL R +
Sbjct: 121 TDDHVQFLI-YQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE 176
Query: 677 MSSNQCSSVGLKGTVGYATPE 697
M+ G T Y PE
Sbjct: 177 MT-------GYVATRWYRAPE 190
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 10/69 (14%)
Query: 629 VASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLK 688
+ L+Y+H I+H DLKPSN+ ++ D + DFGL R + M+ G
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMT-------GYV 183
Query: 689 GTVGYATPE 697
T Y PE
Sbjct: 184 ATRWYRAPE 192
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 26/103 (25%)
Query: 626 AIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTR--FIPEVMSSNQCS 683
+ +++ AL YLH ++ I++ DLK NVLLD++ + D+G+ + P +S C
Sbjct: 159 SAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFC- 214
Query: 684 SVGLKGTVGYATPE---------------YGILLLEIFTGKRP 711
GT Y PE G+L+ E+ G+ P
Sbjct: 215 -----GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSP 252
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 20/141 (14%)
Query: 563 KSFMAECQALRNIRHRNLVKIIT----ACSTSDFQGNYFRALVYEFMHHG--SLESCPRI 616
K E + L++++H N++ ++ A S +F Y LV M ++ C ++
Sbjct: 62 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQKL 118
Query: 617 LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676
+ I + L+Y+H I+H DLKPSN+ ++ D + DFGL R +
Sbjct: 119 TDDHVQFLI-YQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE 174
Query: 677 MSSNQCSSVGLKGTVGYATPE 697
M+ G T Y PE
Sbjct: 175 MT-------GYVATRWYRAPE 188
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 35/72 (48%), Gaps = 11/72 (15%)
Query: 629 VASALEYLHHHCKKPIVHCDLKPSNVLLDN---DMTAHMGDFGLTRFIPEVMSSNQCSSV 685
V S + YLH H IVH DLKP N+LL++ D + DFGL+ + NQ
Sbjct: 145 VLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLS-----AVFENQKKMK 196
Query: 686 GLKGTVGYATPE 697
GT Y PE
Sbjct: 197 ERLGTAYYIAPE 208
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 70/169 (41%), Gaps = 36/169 (21%)
Query: 563 KSFMAECQALRNIRHRNLVKIIT----ACSTSDFQGNYFRALVYEFMHHG--SLESCPRI 616
K E + L++++H N++ ++ A S +F Y LV M ++ C ++
Sbjct: 72 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQKL 128
Query: 617 LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676
+ I + L+Y+H I+H DLKPSN+ ++ D + DFGL R +
Sbjct: 129 TDDHVQFLI-YQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE 184
Query: 677 MSSNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGK 709
M+ G T Y PE G ++ E+ TG+
Sbjct: 185 MT-------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 20/141 (14%)
Query: 563 KSFMAECQALRNIRHRNLVKIIT----ACSTSDFQGNYFRALVYEFMHHG--SLESCPRI 616
K E + L++++H N++ ++ A S +F Y LV M ++ C ++
Sbjct: 72 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQKL 128
Query: 617 LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676
+ I + L+Y+H I+H DLKPSN+ ++ D + DFGL R +
Sbjct: 129 TDDHVQFLI-YQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE 184
Query: 677 MSSNQCSSVGLKGTVGYATPE 697
M+ G T Y PE
Sbjct: 185 MT-------GYVATRWYRAPE 198
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 64/145 (44%), Gaps = 17/145 (11%)
Query: 558 QRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESC---- 613
+RG + F E L N R + ++ A FQ + LV E+ G L +
Sbjct: 101 KRGEVSCFREERDVLVNGDRRWITQLHFA-----FQDENYLYLVMEYYVGGDLLTLLSKF 155
Query: 614 -PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRF 672
RI + + R +A ++ A++ +H + VH D+KP N+LLD + DFG
Sbjct: 156 GERIPAEMARFYLA-EIVMAIDSVH---RLGYVHRDIKPDNILLDRCGHIRLADFGSCL- 210
Query: 673 IPEVMSSNQCSSVGLKGTVGYATPE 697
++ + S+ GT Y +PE
Sbjct: 211 --KLRADGTVRSLVAVGTPDYLSPE 233
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 82/195 (42%), Gaps = 43/195 (22%)
Query: 567 AECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESCPRILSFLRRLNIA 626
AE L ++H +V +I A T G + L+ E++ G L L R I
Sbjct: 70 AERNILEEVKHPFIVDLIYAFQTG---GKLY--LILEYLSGGEL------FMQLEREGIF 118
Query: 627 ID---------VASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVM 677
++ ++ AL +LH +K I++ DLKP N++L++ + DFGL + E +
Sbjct: 119 MEDTACFYLAEISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCK---ESI 172
Query: 678 SSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRP-TSDMFTEGLD 721
+ GT+ Y PE G L+ ++ TG P T + + +D
Sbjct: 173 HDGTVTHT-FCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTID 231
Query: 722 LHNFVKMALPDQILQ 736
K+ LP + Q
Sbjct: 232 KILKCKLNLPPYLTQ 246
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 26/103 (25%)
Query: 626 AIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTR--FIPEVMSSNQCS 683
+ +++ AL YLH ++ I++ DLK NVLLD++ + D+G+ + P +S C
Sbjct: 127 SAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFC- 182
Query: 684 SVGLKGTVGYATPE---------------YGILLLEIFTGKRP 711
GT Y PE G+L+ E+ G+ P
Sbjct: 183 -----GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSP 220
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 64/162 (39%), Gaps = 25/162 (15%)
Query: 563 KSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESCPRILSFLRR 622
K + E + L+ ++H NLV ++ F+ LV+E+ H L R +
Sbjct: 47 KIALREIRMLKQLKHPNLVNLLEV-----FRRKRRLHLVFEYCDHTVLHELDRYQRGVPE 101
Query: 623 ---LNIAIDVASALEYLH-HHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI----- 673
+I A+ + H H+C +H D+KP N+L+ + DFG R +
Sbjct: 102 HLVKSITWQTLQAVNFCHKHNC----IHRDVKPENILITKHSVIKLCDFGFARLLTGPSD 157
Query: 674 ---PEVMSSNQCSSVGLKGTVGYATP----EYGILLLEIFTG 708
EV + S L G Y P G + E+ +G
Sbjct: 158 YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 61/141 (43%), Gaps = 20/141 (14%)
Query: 563 KSFMAECQALRNIRHRNLVKIIT----ACSTSDFQGNYFRALVYEFMHHG--SLESCPRI 616
K E + L++++H N++ ++ A S +F Y LV M ++ C ++
Sbjct: 89 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQKL 145
Query: 617 LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676
+ I + L+Y+H I+H DLKPSN+ ++ D + DFGL R +
Sbjct: 146 TDDHVQFLI-YQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE 201
Query: 677 MSSNQCSSVGLKGTVGYATPE 697
M G T Y PE
Sbjct: 202 MX-------GYVATRWYRAPE 215
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 38.5 bits (88), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 63/148 (42%), Gaps = 18/148 (12%)
Query: 535 ATVYKGILDLD----QTFIAVKVLFLHQR-GALKSFMAECQALRNIRHRNLVKIITACST 589
TVYKGI D + +A+KVL + A K + E + + + +++ C T
Sbjct: 31 GTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRLLGICLT 90
Query: 590 SDFQGNYFRALVYEFMHHGSLESCPR----ILSFLRRLNIAIDVASALEYLHHHCKKPIV 645
S Q LV + M +G L R L LN + +A + YL +V
Sbjct: 91 STVQ------LVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSYLED---VRLV 141
Query: 646 HCDLKPSNVLLDNDMTAHMGDFGLTRFI 673
H DL NVL+ + + DFGL R +
Sbjct: 142 HRDLAARNVLVKSPNHVKITDFGLARLL 169
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 72/155 (46%), Gaps = 17/155 (10%)
Query: 548 FIAVKVLFLHQRGA-LKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMH 606
+A+K++ + G+ L E +AL+N+RH+++ ++ T++ F +V E+
Sbjct: 37 MVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETAN---KIF--MVLEYCP 91
Query: 607 HGSLE----SCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTA 662
G L S R+ R+ + + SA+ Y+H + H DLKP N+L D
Sbjct: 92 GGELFDYIISQDRLSEEETRV-VFRQIVSAVAYVH---SQGYAHRDLKPENLLFDEYHKL 147
Query: 663 HMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE 697
+ DFGL P+ + G++ YA PE
Sbjct: 148 KLIDFGLCA-KPKGNKDYHLQTCC--GSLAYAAPE 179
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 69/161 (42%), Gaps = 31/161 (19%)
Query: 528 SYESLVK------ATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRN 579
YE L K TV+K +A+K + L G S + E L+ ++H+N
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62
Query: 580 LVKIITACSTSDFQGNYFRALVYEFMHHG---SLESC-----PRIL-SFLRRLNIAIDVA 630
+V++ + LV+EF +SC P I+ SFL +L
Sbjct: 63 IVRLHDV-----LHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQL------L 111
Query: 631 SALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTR 671
L + H + ++H DLKP N+L++ + + DFGL R
Sbjct: 112 KGLGFCH---SRNVLHRDLKPQNLLINRNGELKLADFGLAR 149
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 10/69 (14%)
Query: 629 VASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLK 688
+ L+Y+H I+H DLKPSN+ ++ D + DFGL R + M+ G
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMT-------GYV 183
Query: 689 GTVGYATPE 697
T Y PE
Sbjct: 184 ATRWYRAPE 192
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 94/231 (40%), Gaps = 25/231 (10%)
Query: 515 SESSSRKDLLLNVSYESLVKATVYKGILDLDQTFIAVKVL----FLHQRGALKSFMAECQ 570
S+S+S LL+ A V++G A+KV FL + M E +
Sbjct: 3 SQSTSNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLR---PVDVQMREFE 59
Query: 571 ALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESC---PRILSFLRRLNIAI 627
L+ + H+N+VK+ + + + L+ EF GSL + P L I
Sbjct: 60 VLKKLNHKNIVKLF---AIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLI 116
Query: 628 DVASALEYLHHHCKKPIVHCDLKPSNVLL----DNDMTAHMGDFGLTRFIPEVMSSNQCS 683
+ + ++H + IVH ++KP N++ D + DFG R E+ Q
Sbjct: 117 VLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR---ELEDDEQF- 172
Query: 684 SVGLKGTVGYATP---EYGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALP 731
V L GT Y P E +L + T D+++ G+ ++ +LP
Sbjct: 173 -VSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 73/175 (41%), Gaps = 30/175 (17%)
Query: 561 ALK-SFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESCPRILSF 619
ALK +AE ++ + + +V++I C + LV E G L +
Sbjct: 54 ALKDELLAEANVMQQLDNPYIVRMIGICEAESWM------LVMEMAELGPLNKYLQQNRH 107
Query: 620 LRRLNI---AIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676
++ NI V+ ++YL + VH DL NVLL A + DFGL++ +
Sbjct: 108 VKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRAD 164
Query: 677 MSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDM 715
+ + + G K V + PE +G+L+ E F+ G++P M
Sbjct: 165 ENXYKAQTHG-KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 218
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 26/103 (25%)
Query: 626 AIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTR--FIPEVMSSNQCS 683
+ +++ AL YLH ++ I++ DLK NVLLD++ + D+G+ + P +S C
Sbjct: 112 SAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFC- 167
Query: 684 SVGLKGTVGYATPE---------------YGILLLEIFTGKRP 711
GT Y PE G+L+ E+ G+ P
Sbjct: 168 -----GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSP 205
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 62/154 (40%), Gaps = 30/154 (19%)
Query: 535 ATVYKGILDLDQTFIAVKVLFLHQRGAL-----KSFMAECQALRNIRHRNLVKIITACST 589
TVYKG+ + + + V R A K + E + ++ + ++ +++ C T
Sbjct: 31 GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT 90
Query: 590 SDFQGNYFRALVYEFMHHGSLESCPRILSFLRR----------LNIAIDVASALEYLHHH 639
S Q L+ + M G L L ++R LN + +A + YL
Sbjct: 91 STVQ------LIMQLMPFGCL------LDYVREHKDNIGSQYLLNWCVQIAKGMNYLE-- 136
Query: 640 CKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673
+ +VH DL NVL+ + DFG + +
Sbjct: 137 -DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLL 169
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 62/154 (40%), Gaps = 30/154 (19%)
Query: 535 ATVYKGILDLDQTFIAVKVLFLHQRGAL-----KSFMAECQALRNIRHRNLVKIITACST 589
TVYKG+ + + + V R A K + E + ++ + ++ +++ C T
Sbjct: 31 GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT 90
Query: 590 SDFQGNYFRALVYEFMHHGSLESCPRILSFLRR----------LNIAIDVASALEYLHHH 639
S Q L+ + M G L L ++R LN + +A + YL
Sbjct: 91 STVQ------LIMQLMPFGCL------LDYVREHKDNIGSQYLLNWCVQIAKGMNYLE-- 136
Query: 640 CKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673
+ +VH DL NVL+ + DFG + +
Sbjct: 137 -DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLL 169
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 38.1 bits (87), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 82/195 (42%), Gaps = 43/195 (22%)
Query: 567 AECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESCPRILSFLRRLNIA 626
AE L ++H +V +I A T G + L+ E++ G L L R I
Sbjct: 70 AERNILEEVKHPFIVDLIYAFQTG---GKLY--LILEYLSGGEL------FMQLEREGIF 118
Query: 627 ID---------VASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVM 677
++ ++ AL +LH +K I++ DLKP N++L++ + DFGL + E +
Sbjct: 119 MEDTACFYLAEISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCK---ESI 172
Query: 678 SSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRP-TSDMFTEGLD 721
+ GT+ Y PE G L+ ++ TG P T + + +D
Sbjct: 173 HDGTVTHX-FCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTID 231
Query: 722 LHNFVKMALPDQILQ 736
K+ LP + Q
Sbjct: 232 KILKCKLNLPPYLTQ 246
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 14/113 (12%)
Query: 564 SFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESCPRILSFLRRL 623
+ + E L+ + H N++K+ + NY+ LV E G L + +
Sbjct: 67 ALLDEVAVLKQLDHPNIMKLYEFFED---KRNYY--LVMEVYRGGELFDEIILRQKFSEV 121
Query: 624 NIAI---DVASALEYLHHHCKKPIVHCDLKPSNVLLDN---DMTAHMGDFGLT 670
+ A+ V S YLH H IVH DLKP N+LL++ D + DFGL+
Sbjct: 122 DAAVIMKQVLSGTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLS 171
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 68/169 (40%), Gaps = 34/169 (20%)
Query: 565 FMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESC----------P 614
F+ E + H+N+V+ I S R ++ E M G L+S P
Sbjct: 81 FLMEALIISKFNHQNIVRCIGVSLQS-----LPRFILLELMAGGDLKSFLRETRPRPSQP 135
Query: 615 RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD---NDMTAHMGDFGLTR 671
L+ L L++A D+A +YL + +H D+ N LL A +GDFG+ +
Sbjct: 136 SSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQ 192
Query: 672 FI--PEVMSSNQCSSVGLKG-----------TVGYATPEYGILLLEIFT 707
I C+ + +K T T +G+LL EIF+
Sbjct: 193 DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 26/103 (25%)
Query: 626 AIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTR--FIPEVMSSNQCS 683
+ +++ AL YLH ++ I++ DLK NVLLD++ + D+G+ + P +S C
Sbjct: 116 SAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFC- 171
Query: 684 SVGLKGTVGYATPE---------------YGILLLEIFTGKRP 711
GT Y PE G+L+ E+ G+ P
Sbjct: 172 -----GTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSP 209
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 73/175 (41%), Gaps = 30/175 (17%)
Query: 561 ALK-SFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESCPRILSF 619
ALK +AE ++ + + +V++I C + LV E G L +
Sbjct: 413 ALKDELLAEANVMQQLDNPYIVRMIGICEAESWM------LVMEMAELGPLNKYLQQNRH 466
Query: 620 LRRLNI---AIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676
++ NI V+ ++YL + VH DL NVLL A + DFGL++ +
Sbjct: 467 VKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRAD 523
Query: 677 MSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDM 715
+ + + G K V + PE +G+L+ E F+ G++P M
Sbjct: 524 ENYYKAQTHG-KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 577
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 55/139 (39%), Gaps = 30/139 (21%)
Query: 592 FQGNYFRALVYEFMHHGSLESCPRILSFLRRLN---------IAIDVASALEYLHHHCKK 642
F+ N +V E+M G + S LRR+ A + EYLH
Sbjct: 110 FKDNSNLYMVMEYMPGGDM------FSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SL 160
Query: 643 PIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI----------PEVMSSNQCSSVGLKGTVG 692
+++ DLKP N+L+D + DFG + + PE ++ S G V
Sbjct: 161 DLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVD 220
Query: 693 YATPEYGILLLEIFTGKRP 711
+ G+L+ E+ G P
Sbjct: 221 WWA--LGVLIYEMAAGYPP 237
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 73/175 (41%), Gaps = 30/175 (17%)
Query: 561 ALK-SFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESCPRILSF 619
ALK +AE ++ + + +V++I C + LV E G L +
Sbjct: 412 ALKDELLAEANVMQQLDNPYIVRMIGICEAESWM------LVMEMAELGPLNKYLQQNRH 465
Query: 620 LRRLNI---AIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676
++ NI V+ ++YL + VH DL NVLL A + DFGL++ +
Sbjct: 466 VKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRAD 522
Query: 677 MSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDM 715
+ + + G K V + PE +G+L+ E F+ G++P M
Sbjct: 523 ENYYKAQTHG-KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 576
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 61/141 (43%), Gaps = 20/141 (14%)
Query: 563 KSFMAECQALRNIRHRNLVKIIT----ACSTSDFQGNYFRALVYEFMHHG--SLESCPRI 616
K E + L++++H N++ ++ A S +F Y LV M ++ C ++
Sbjct: 86 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQKL 142
Query: 617 LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676
+ I + L+Y+H I+H DLKPSN+ ++ D + DFGL R +
Sbjct: 143 TDDHVQFLI-YQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE 198
Query: 677 MSSNQCSSVGLKGTVGYATPE 697
M G T Y PE
Sbjct: 199 MX-------GXVATRWYRAPE 212
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 73/175 (41%), Gaps = 30/175 (17%)
Query: 561 ALK-SFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESCPRILSF 619
ALK +AE ++ + + +V++I C + LV E G L +
Sbjct: 48 ALKDELLAEANVMQQLDNPYIVRMIGICEAESWM------LVMEMAELGPLNKYLQQNRH 101
Query: 620 LRRLNI---AIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676
++ NI V+ ++YL + VH DL NVLL A + DFGL++ +
Sbjct: 102 VKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRAD 158
Query: 677 MSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDM 715
+ + + G K V + PE +G+L+ E F+ G++P M
Sbjct: 159 ENYYKAQTHG-KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 212
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 14/113 (12%)
Query: 564 SFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESCPRILSFLRRL 623
+ + E L+ + H N++K+ + NY+ LV E G L + +
Sbjct: 50 ALLDEVAVLKQLDHPNIMKLYEFFED---KRNYY--LVMEVYRGGELFDEIILRQKFSEV 104
Query: 624 NIAI---DVASALEYLHHHCKKPIVHCDLKPSNVLLDN---DMTAHMGDFGLT 670
+ A+ V S YLH H IVH DLKP N+LL++ D + DFGL+
Sbjct: 105 DAAVIMKQVLSGTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLS 154
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 73/175 (41%), Gaps = 30/175 (17%)
Query: 561 ALK-SFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESCPRILSF 619
ALK +AE ++ + + +V++I C + LV E G L +
Sbjct: 68 ALKDELLAEANVMQQLDNPYIVRMIGICEAESWM------LVMEMAELGPLNKYLQQNRH 121
Query: 620 LRRLNI---AIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676
++ NI V+ ++YL + VH DL NVLL A + DFGL++ +
Sbjct: 122 VKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRAD 178
Query: 677 MSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDM 715
+ + + G K V + PE +G+L+ E F+ G++P M
Sbjct: 179 ENYYKAQTHG-KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 232
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 62/154 (40%), Gaps = 30/154 (19%)
Query: 535 ATVYKGILDLDQTFIAVKVLFLHQRGAL-----KSFMAECQALRNIRHRNLVKIITACST 589
TVYKG+ + + + V R A K + E + ++ + ++ +++ C T
Sbjct: 33 GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT 92
Query: 590 SDFQGNYFRALVYEFMHHGSLESCPRILSFLRR----------LNIAIDVASALEYLHHH 639
S Q L+ + M G L L ++R LN + +A + YL
Sbjct: 93 STVQ------LIMQLMPFGCL------LDYVREHKDNIGSQYLLNWCVQIAKGMNYLE-- 138
Query: 640 CKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673
+ +VH DL NVL+ + DFG + +
Sbjct: 139 -DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLL 171
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 42/76 (55%), Gaps = 9/76 (11%)
Query: 600 LVYEFMHHGSLESCPRILSFLRRLNIAI---DVASALEYLHHHCKKPIVHCDLKPSNVLL 656
LV+E M GS+ S L ++ DVASAL++LH+ K I H DLKP N+L
Sbjct: 88 LVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHN---KGIAHRDLKPENILC 144
Query: 657 D--NDMT-AHMGDFGL 669
+ N ++ + DFGL
Sbjct: 145 EHPNQVSPVKICDFGL 160
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 73/175 (41%), Gaps = 30/175 (17%)
Query: 561 ALK-SFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESCPRILSF 619
ALK +AE ++ + + +V++I C + LV E G L +
Sbjct: 54 ALKDELLAEANVMQQLDNPYIVRMIGICEAESWM------LVMEMAELGPLNKYLQQNRH 107
Query: 620 LRRLNI---AIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676
++ NI V+ ++YL + VH DL NVLL A + DFGL++ +
Sbjct: 108 VKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRAD 164
Query: 677 MSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDM 715
+ + + G K V + PE +G+L+ E F+ G++P M
Sbjct: 165 ENYYKAQTHG-KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 218
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 81/192 (42%), Gaps = 41/192 (21%)
Query: 549 IAVKVLFLHQRGAL----KSFMAECQALRNIRHR-NLVKIITACSTS--------DFQ-- 593
+AVK+L + GA ++ M+E + L +I H N+V ++ AC+ +F
Sbjct: 62 VAVKML---KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKF 118
Query: 594 GN---YFRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLK 650
GN Y R+ EF+ + + L+ + + VA +E+L + +H DL
Sbjct: 119 GNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLA 175
Query: 651 PSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE------------- 697
N+LL + DFGL R I + + + + + PE
Sbjct: 176 ARNILLSEKNVVKICDFGLARDIXK--DPDXVRKGDARLPLKWMAPETIFDRVYTIQSDV 233
Query: 698 --YGILLLEIFT 707
+G+LL EIF+
Sbjct: 234 WSFGVLLWEIFS 245
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 38.1 bits (87), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 623 LNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFG 668
L I A++++H K PI+H DLK N+LL N T + DFG
Sbjct: 139 LKIFYQTCRAVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFG 183
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 38.1 bits (87), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 62/154 (40%), Gaps = 30/154 (19%)
Query: 535 ATVYKGILDLDQTFIAVKVLFLHQRGAL-----KSFMAECQALRNIRHRNLVKIITACST 589
TVYKG+ + + + V R A K + E + ++ + ++ +++ C T
Sbjct: 31 GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT 90
Query: 590 SDFQGNYFRALVYEFMHHGSLESCPRILSFLRR----------LNIAIDVASALEYLHHH 639
S Q L+ + M G L L ++R LN + +A + YL
Sbjct: 91 STVQ------LITQLMPFGCL------LDYVREHKDNIGSQYLLNWCVQIAKGMNYLE-- 136
Query: 640 CKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673
+ +VH DL NVL+ + DFG + +
Sbjct: 137 -DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLL 169
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 38.1 bits (87), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 73/175 (41%), Gaps = 30/175 (17%)
Query: 561 ALK-SFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESCPRILSF 619
ALK +AE ++ + + +V++I C + LV E G L +
Sbjct: 60 ALKDELLAEANVMQQLDNPYIVRMIGICEAESWM------LVMEMAELGPLNKYLQQNRH 113
Query: 620 LRRLNI---AIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676
++ NI V+ ++YL + VH DL NVLL A + DFGL++ +
Sbjct: 114 VKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRAD 170
Query: 677 MSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDM 715
+ + + G K V + PE +G+L+ E F+ G++P M
Sbjct: 171 ENYYKAQTHG-KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 224
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 38.1 bits (87), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 87/217 (40%), Gaps = 47/217 (21%)
Query: 537 VYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF---- 592
VY G +Q IA+K + + E ++++H+N+V+ + + S + F
Sbjct: 24 VYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIF 83
Query: 593 ----QGNYFRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCD 648
G AL+ G L+ + + F + + L+YLH + IVH D
Sbjct: 84 MEQVPGGSLSALLRS--KWGPLKDNEQTIGFYTK-----QILEGLKYLHDN---QIVHRD 133
Query: 649 LKPSNVLLDN-DMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPEY--------- 698
+K NVL++ + DFG ++ + + N C+ GT+ Y PE
Sbjct: 134 IKGDNVLINTYSGVLKISDFGTSKRLAGI---NPCTET-FTGTLQYMAPEIIDKGPRGYG 189
Query: 699 --------GILLLEIFTGK-------RPTSDMFTEGL 720
G ++E+ TGK P + MF G+
Sbjct: 190 KAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGM 226
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 73/175 (41%), Gaps = 30/175 (17%)
Query: 561 ALK-SFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESCPRILSF 619
ALK +AE ++ + + +V++I C + LV E G L +
Sbjct: 50 ALKDELLAEANVMQQLDNPYIVRMIGICEAESWM------LVMEMAELGPLNKYLQQNRH 103
Query: 620 LRRLNI---AIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676
++ NI V+ ++YL + VH DL NVLL A + DFGL++ +
Sbjct: 104 VKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRAD 160
Query: 677 MSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDM 715
+ + + G K V + PE +G+L+ E F+ G++P M
Sbjct: 161 ENYYKAQTHG-KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 214
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 62/154 (40%), Gaps = 30/154 (19%)
Query: 535 ATVYKGILDLDQTFIAVKVLFLHQRGAL-----KSFMAECQALRNIRHRNLVKIITACST 589
TVYKG+ + + + V R A K + E + ++ + ++ +++ C T
Sbjct: 36 GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT 95
Query: 590 SDFQGNYFRALVYEFMHHGSLESCPRILSFLRR----------LNIAIDVASALEYLHHH 639
S Q L+ + M G L L ++R LN + +A + YL
Sbjct: 96 STVQ------LITQLMPFGCL------LDYVREHKDNIGSQYLLNWCVQIAKGMNYLE-- 141
Query: 640 CKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673
+ +VH DL NVL+ + DFG + +
Sbjct: 142 -DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLL 174
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 62/141 (43%), Gaps = 20/141 (14%)
Query: 563 KSFMAECQALRNIRHRNLVKIIT----ACSTSDFQGNYFRALVYEFMHHG--SLESCPRI 616
K E + L++++H N++ ++ A S +F Y LV M ++ C ++
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQKL 122
Query: 617 LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676
+ I + L+Y+H I+H DLKPSN+ ++ D + D+GL R +
Sbjct: 123 TDDHVQFLI-YQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDE 178
Query: 677 MSSNQCSSVGLKGTVGYATPE 697
M+ G T Y PE
Sbjct: 179 MT-------GYVATRWYRAPE 192
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 10/69 (14%)
Query: 629 VASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLK 688
+ L+Y+H I+H DLKPSN+ ++ D + DFGL R + M+ G
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMT-------GYV 183
Query: 689 GTVGYATPE 697
T Y PE
Sbjct: 184 ATRWYRAPE 192
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 62/154 (40%), Gaps = 30/154 (19%)
Query: 535 ATVYKGILDLDQTFIAVKVLFLHQRGAL-----KSFMAECQALRNIRHRNLVKIITACST 589
TVYKG+ + + + V R A K + E + ++ + ++ +++ C T
Sbjct: 29 GTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLT 88
Query: 590 SDFQGNYFRALVYEFMHHGSLESCPRILSFLRR----------LNIAIDVASALEYLHHH 639
S Q L+ + M G L L ++R LN + +A + YL
Sbjct: 89 STVQ------LITQLMPFGCL------LDYVREHKDNIGSQYLLNWCVQIAKGMNYLE-- 134
Query: 640 CKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673
+ +VH DL NVL+ + DFG + +
Sbjct: 135 -DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLL 167
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 55/139 (39%), Gaps = 30/139 (21%)
Query: 592 FQGNYFRALVYEFMHHGSLESCPRILSFLRRLN---------IAIDVASALEYLHHHCKK 642
F+ N +V E+M G + S LRR+ A + EYLH
Sbjct: 110 FKDNSNLYMVMEYMPGGDM------FSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SL 160
Query: 643 PIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI----------PEVMSSNQCSSVGLKGTVG 692
+++ DLKP N+L+D + DFG + + PE ++ S G V
Sbjct: 161 DLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVD 220
Query: 693 YATPEYGILLLEIFTGKRP 711
+ G+L+ E+ G P
Sbjct: 221 WWA--LGVLIYEMAAGYPP 237
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 59/135 (43%), Gaps = 19/135 (14%)
Query: 546 QTFIAVKVL--FLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYE 603
+T +A+K + F HQ ++ + E Q L RH N++ I S + +V +
Sbjct: 68 KTRVAIKKISPFEHQTYCQRT-LREIQILLRFRHENVIGIRDILRASTLEAMRDVYIVQD 126
Query: 604 FMHHGSLE-------SCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLL 656
M + S I FL + + L+Y+H ++H DLKPSN+L+
Sbjct: 127 LMETDLYKLLKSQQLSNDHICYFLYQ------ILRGLKYIH---SANVLHRDLKPSNLLI 177
Query: 657 DNDMTAHMGDFGLTR 671
+ + DFGL R
Sbjct: 178 NTTCDLKICDFGLAR 192
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 73/175 (41%), Gaps = 30/175 (17%)
Query: 561 ALK-SFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESCPRILSF 619
ALK +AE ++ + + +V++I C + LV E G L +
Sbjct: 70 ALKDELLAEANVMQQLDNPYIVRMIGICEAESWM------LVMEMAELGPLNKYLQQNRH 123
Query: 620 LRRLNI---AIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676
++ NI V+ ++YL + VH DL NVLL A + DFGL++ +
Sbjct: 124 VKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRAD 180
Query: 677 MSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDM 715
+ + + G K V + PE +G+L+ E F+ G++P M
Sbjct: 181 ENYYKAQTHG-KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 234
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 73/175 (41%), Gaps = 30/175 (17%)
Query: 561 ALK-SFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESCPRILSF 619
ALK +AE ++ + + +V++I C + LV E G L +
Sbjct: 70 ALKDELLAEANVMQQLDNPYIVRMIGICEAESWM------LVMEMAELGPLNKYLQQNRH 123
Query: 620 LRRLNI---AIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676
++ NI V+ ++YL + VH DL NVLL A + DFGL++ +
Sbjct: 124 VKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRAD 180
Query: 677 MSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDM 715
+ + + G K V + PE +G+L+ E F+ G++P M
Sbjct: 181 ENYYKAQTHG-KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGM 234
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 48/220 (21%), Positives = 88/220 (40%), Gaps = 38/220 (17%)
Query: 545 DQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEF 604
D F A+K + H++ + E R H N+++++ C + + L+ F
Sbjct: 53 DGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYC-LRERGAKHEAWLLLPF 111
Query: 605 MHHGSL----ESCPRILSFLRR---LNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD 657
G+L E +FL L + + + LE +H K H DLKP+N+LL
Sbjct: 112 FKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH---AKGYAHRDLKPTNILLG 168
Query: 658 NDMTAHMGDFG-LTRFIPEVMSSNQCSSV----GLKGTVGYATPE--------------- 697
++ + D G + + V S Q ++ + T+ Y PE
Sbjct: 169 DEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTD 228
Query: 698 ---YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQI 734
G +L + G+ P +F +G + V +A+ +Q+
Sbjct: 229 VWSLGCVLYAMMFGEGPYDMVFQKG----DSVALAVQNQL 264
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 64/139 (46%), Gaps = 21/139 (15%)
Query: 543 DLDQTFIAVKVL--FLHQRGALKSFMAECQALRNIRHRNLV---KIITACSTSDFQGNY- 596
+L++ +A+K + F HQ ++ + E + L RH N++ II A + + Y
Sbjct: 49 NLNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYI 107
Query: 597 ----FRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPS 652
+Y+ + L S I FL + + L+Y+H ++H DLKPS
Sbjct: 108 VQDLMETDLYKLLKTQHL-SNDHICYFLYQ------ILRGLKYIH---SANVLHRDLKPS 157
Query: 653 NVLLDNDMTAHMGDFGLTR 671
N+LL+ + DFGL R
Sbjct: 158 NLLLNTTXDLKICDFGLAR 176
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 50/117 (42%), Gaps = 20/117 (17%)
Query: 619 FLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMS 678
+L + IAID L Y+H D+KP N+L+D + + DFG ++M
Sbjct: 180 YLAEMVIAIDSVHQLHYVHR---------DIKPDNILMDMNGHIRLADFGSCL---KLME 227
Query: 679 SNQCSSVGLKGTVGYATPEYGILLLEIFTGKR----PTSDMFTEGLDLHNFVKMALP 731
S GT Y +PE +L+ G + P D ++ G+ ++ + P
Sbjct: 228 DGTVQSSVAVGTPDYISPE----ILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETP 280
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 69/162 (42%), Gaps = 21/162 (12%)
Query: 549 IAVKVLFLHQRGALKSFMAECQALRNI--RHRNLVKIITACSTSDFQGNYFRALVY---E 603
+AVKV F + S+ E + + + RH N++ I A D +G +Y +
Sbjct: 63 VAVKVFFTTEEA---SWFRETEIYQTVLMRHENILGFIAA----DIKGTGSWTQLYLITD 115
Query: 604 FMHHGSLESCPR--ILSFLRRLNIAIDVASALEYLHHHC-----KKPIVHCDLKPSNVLL 656
+ +GSL + L L +A S L +LH K I H DLK N+L+
Sbjct: 116 YHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILV 175
Query: 657 DNDMTAHMGDFGLT-RFIPEVMSSNQCSSVGLKGTVGYATPE 697
+ T + D GL +FI + + + + GT Y PE
Sbjct: 176 KKNGTCCIADLGLAVKFISDTNEVDIPPNTRV-GTKRYMPPE 216
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 37.7 bits (86), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 64/139 (46%), Gaps = 21/139 (15%)
Query: 543 DLDQTFIAVKVL--FLHQRGALKSFMAECQALRNIRHRNLV---KIITACSTSDFQGNY- 596
+L++ +A+K + F HQ ++ + E + L RH N++ II A + + Y
Sbjct: 49 NLNKVRVAIKKISPFEHQTYXQRT-LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYI 107
Query: 597 ----FRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPS 652
+Y+ + L S I FL + + L+Y+H ++H DLKPS
Sbjct: 108 VQDLMETDLYKLLKTQHL-SNDHICYFLYQ------ILRGLKYIH---SANVLHRDLKPS 157
Query: 653 NVLLDNDMTAHMGDFGLTR 671
N+LL+ + DFGL R
Sbjct: 158 NLLLNTTXDLKICDFGLAR 176
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 37.7 bits (86), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 49/123 (39%), Gaps = 26/123 (21%)
Query: 610 LESCP--RILSFLRRLN---------IAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN 658
LE P + S LRR+ A + EYLH +++ DLKP N+L+D
Sbjct: 121 LEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQ 177
Query: 659 DMTAHMGDFGLTRFI----------PEVMSSNQCSSVGLKGTVGYATPEYGILLLEIFTG 708
+ DFG + + PE ++ S G V + G+L+ E+ G
Sbjct: 178 QGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA--LGVLIYEMAAG 235
Query: 709 KRP 711
P
Sbjct: 236 YPP 238
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 37.4 bits (85), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 64/139 (46%), Gaps = 21/139 (15%)
Query: 543 DLDQTFIAVKVL--FLHQRGALKSFMAECQALRNIRHRNLV---KIITACSTSDFQGNY- 596
+L++ +A+K + F HQ ++ + E + L RH N++ II A + + Y
Sbjct: 50 NLNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYI 108
Query: 597 ----FRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPS 652
+Y+ + L S I FL + + L+Y+H ++H DLKPS
Sbjct: 109 VQDLMETDLYKLLKTQHL-SNDHICYFLYQ------ILRGLKYIH---SANVLHRDLKPS 158
Query: 653 NVLLDNDMTAHMGDFGLTR 671
N+LL+ + DFGL R
Sbjct: 159 NLLLNTTCDLKICDFGLAR 177
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 37.4 bits (85), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 64/139 (46%), Gaps = 21/139 (15%)
Query: 543 DLDQTFIAVKVL--FLHQRGALKSFMAECQALRNIRHRNLV---KIITACSTSDFQGNY- 596
+L++ +A+K + F HQ ++ + E + L RH N++ II A + + Y
Sbjct: 51 NLNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYI 109
Query: 597 ----FRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPS 652
+Y+ + L S I FL + + L+Y+H ++H DLKPS
Sbjct: 110 VQDLMETDLYKLLKTQHL-SNDHICYFLYQ------ILRGLKYIH---SANVLHRDLKPS 159
Query: 653 NVLLDNDMTAHMGDFGLTR 671
N+LL+ + DFGL R
Sbjct: 160 NLLLNTTCDLKICDFGLAR 178
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 37.4 bits (85), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 64/139 (46%), Gaps = 21/139 (15%)
Query: 543 DLDQTFIAVKVL--FLHQRGALKSFMAECQALRNIRHRNLV---KIITACSTSDFQGNY- 596
+L++ +A+K + F HQ ++ + E + L RH N++ II A + + Y
Sbjct: 42 NLNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYI 100
Query: 597 ----FRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPS 652
+Y+ + L S I FL + + L+Y+H ++H DLKPS
Sbjct: 101 VQDLMETDLYKLLKTQHL-SNDHICYFLYQ------ILRGLKYIH---SANVLHRDLKPS 150
Query: 653 NVLLDNDMTAHMGDFGLTR 671
N+LL+ + DFGL R
Sbjct: 151 NLLLNTTCDLKICDFGLAR 169
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 37.4 bits (85), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 64/139 (46%), Gaps = 21/139 (15%)
Query: 543 DLDQTFIAVKVL--FLHQRGALKSFMAECQALRNIRHRNLV---KIITACSTSDFQGNY- 596
+L++ +A+K + F HQ ++ + E + L RH N++ II A + + Y
Sbjct: 49 NLNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYI 107
Query: 597 ----FRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPS 652
+Y+ + L S I FL + + L+Y+H ++H DLKPS
Sbjct: 108 VQDLMETDLYKLLKTQHL-SNDHICYFLYQ------ILRGLKYIH---SANVLHRDLKPS 157
Query: 653 NVLLDNDMTAHMGDFGLTR 671
N+LL+ + DFGL R
Sbjct: 158 NLLLNTTCDLKICDFGLAR 176
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 37.4 bits (85), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 64/139 (46%), Gaps = 21/139 (15%)
Query: 543 DLDQTFIAVKVL--FLHQRGALKSFMAECQALRNIRHRNLV---KIITACSTSDFQGNY- 596
+L++ +A+K + F HQ ++ + E + L RH N++ II A + + Y
Sbjct: 49 NLNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYI 107
Query: 597 ----FRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPS 652
+Y+ + L S I FL + + L+Y+H ++H DLKPS
Sbjct: 108 VQDLMETDLYKLLKTQHL-SNDHICYFLYQ------ILRGLKYIH---SANVLHRDLKPS 157
Query: 653 NVLLDNDMTAHMGDFGLTR 671
N+LL+ + DFGL R
Sbjct: 158 NLLLNTTCDLKICDFGLAR 176
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 37.4 bits (85), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 64/139 (46%), Gaps = 21/139 (15%)
Query: 543 DLDQTFIAVKVL--FLHQRGALKSFMAECQALRNIRHRNLV---KIITACSTSDFQGNY- 596
+L++ +A+K + F HQ ++ + E + L RH N++ II A + + Y
Sbjct: 50 NLNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYI 108
Query: 597 ----FRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPS 652
+Y+ + L S I FL + + L+Y+H ++H DLKPS
Sbjct: 109 VQDLMETDLYKLLKTQHL-SNDHICYFLYQ------ILRGLKYIH---SANVLHRDLKPS 158
Query: 653 NVLLDNDMTAHMGDFGLTR 671
N+LL+ + DFGL R
Sbjct: 159 NLLLNTTCDLKICDFGLAR 177
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 37.4 bits (85), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 51/113 (45%), Gaps = 5/113 (4%)
Query: 563 KSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHG--SLESCPRILSFL 620
K + E L + H ++VK++ D + +V E L P L+ L
Sbjct: 97 KRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTEL 156
Query: 621 RRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673
+ ++ ++Y+H I+H DLKP+N L++ D + + DFGL R +
Sbjct: 157 HIKTLLYNLLVGVKYVH---SAGILHRDLKPANCLVNQDCSVKVCDFGLARTV 206
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 37.4 bits (85), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 63/155 (40%), Gaps = 27/155 (17%)
Query: 572 LRNIRHRNLVKIITACSTSDFQGNYFR-ALVYEFMHHGSLESCPRILSFLRRLNIAIDVA 630
L++++H N++ ++ + + N++ LV FM + S + + +
Sbjct: 95 LKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQML 154
Query: 631 SALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGT 690
L+Y+H +VH DLKP N+ ++ D + DFGL R M+ G T
Sbjct: 155 KGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMT-------GYVVT 204
Query: 691 VGYATPE----------------YGILLLEIFTGK 709
Y PE G ++ E+ TGK
Sbjct: 205 RWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 37.4 bits (85), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 64/139 (46%), Gaps = 21/139 (15%)
Query: 543 DLDQTFIAVKVL--FLHQRGALKSFMAECQALRNIRHRNLV---KIITACSTSDFQGNY- 596
+L++ +A+K + F HQ ++ + E + L RH N++ II A + + Y
Sbjct: 43 NLNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYI 101
Query: 597 ----FRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPS 652
+Y+ + L S I FL + + L+Y+H ++H DLKPS
Sbjct: 102 VQDLMETDLYKLLKTQHL-SNDHICYFLYQ------ILRGLKYIH---SANVLHRDLKPS 151
Query: 653 NVLLDNDMTAHMGDFGLTR 671
N+LL+ + DFGL R
Sbjct: 152 NLLLNTTCDLKICDFGLAR 170
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 37.4 bits (85), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 64/139 (46%), Gaps = 21/139 (15%)
Query: 543 DLDQTFIAVKVL--FLHQRGALKSFMAECQALRNIRHRNLV---KIITACSTSDFQGNY- 596
+L++ +A+K + F HQ ++ + E + L RH N++ II A + + Y
Sbjct: 43 NLNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYI 101
Query: 597 ----FRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPS 652
+Y+ + L S I FL + + L+Y+H ++H DLKPS
Sbjct: 102 VQDLMETDLYKLLKTQHL-SNDHICYFLYQ------ILRGLKYIH---SANVLHRDLKPS 151
Query: 653 NVLLDNDMTAHMGDFGLTR 671
N+LL+ + DFGL R
Sbjct: 152 NLLLNTTCDLKICDFGLAR 170
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 37.4 bits (85), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 65/150 (43%), Gaps = 29/150 (19%)
Query: 537 VYKGILDLDQTFIAVKVLFLH--QRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQG 594
VYK I + +A+K + L + G + + E L+ ++HRN++++ S
Sbjct: 50 VYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIEL-----KSVIHH 104
Query: 595 NYFRALVYEF--------MHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVH 646
N+ L++E+ M S I SFL +L ++ + LH
Sbjct: 105 NHRLHLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHR-------- 156
Query: 647 CDLKPSNVLL---DNDMTA--HMGDFGLTR 671
DLKP N+LL D T +GDFGL R
Sbjct: 157 -DLKPQNLLLSVSDASETPVLKIGDFGLAR 185
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 37.4 bits (85), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 21/30 (70%)
Query: 644 IVHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673
I+H DLKP+N LL+ D + + DFGL R I
Sbjct: 152 IIHRDLKPANCLLNQDCSVKICDFGLARTI 181
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 37.0 bits (84), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 83/191 (43%), Gaps = 41/191 (21%)
Query: 549 IAVKVLFLHQRGAL----KSFMAECQALRNIRHR-NLVKIITACSTS--------DFQ-- 593
+AVK+L + GA ++ M+E + L +I H N+V ++ AC+ +F
Sbjct: 60 VAVKML---KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKF 116
Query: 594 GN---YFRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLK 650
GN Y R+ EF+ + L L+ + + VA +E+L + +H DL
Sbjct: 117 GNLSTYLRSKRNEFVPYKDLYK--DFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLA 171
Query: 651 PSNVLLDNDMTAHMGDFGLTRFI---PEVMSSNQCSSVGLKG-----------TVGYATP 696
N+LL + DFGL R I P+ + + + LK T+
Sbjct: 172 ARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGD-ARLPLKWMAPETIFDRVYTIQSDVW 230
Query: 697 EYGILLLEIFT 707
+G+LL EIF+
Sbjct: 231 SFGVLLWEIFS 241
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 644 IVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSN 680
I+H DLKP+N LL+ D + + DFGL R I +N
Sbjct: 150 IIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTN 186
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 21/139 (15%)
Query: 543 DLDQTFIAVKVL--FLHQRGALKSFMAECQALRNIRHRNLV---KIITACSTSDFQGNY- 596
++++ +A+K + F HQ ++ + E + L RH N++ II A + + Y
Sbjct: 45 NVNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYI 103
Query: 597 ----FRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPS 652
+Y+ + L S I FL + + L+Y+H ++H DLKPS
Sbjct: 104 VQDLMETDLYKLLKTQHL-SNDHICYFLYQ------ILRGLKYIH---SANVLHRDLKPS 153
Query: 653 NVLLDNDMTAHMGDFGLTR 671
N+LL+ + DFGL R
Sbjct: 154 NLLLNTTXDLKIXDFGLAR 172
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 63/155 (40%), Gaps = 27/155 (17%)
Query: 572 LRNIRHRNLVKIITACSTSDFQGNYFR-ALVYEFMHHGSLESCPRILSFLRRLNIAIDVA 630
L++++H N++ ++ + + N++ LV FM + S + + +
Sbjct: 77 LKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQML 136
Query: 631 SALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGT 690
L+Y+H +VH DLKP N+ ++ D + DFGL R M+ G T
Sbjct: 137 KGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMT-------GYVVT 186
Query: 691 VGYATPE----------------YGILLLEIFTGK 709
Y PE G ++ E+ TGK
Sbjct: 187 RWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 50/123 (40%), Gaps = 26/123 (21%)
Query: 610 LESCP--RILSFLRRLN---------IAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN 658
+E P + S LRR+ A + EYLH +++ DLKP N+++D
Sbjct: 120 MEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQ 176
Query: 659 DMTAHMGDFGLTRFI----------PEVMSSNQCSSVGLKGTVGYATPEYGILLLEIFTG 708
+ DFGL + + PE ++ S G V + G+L+ E+ G
Sbjct: 177 QGYIQVTDFGLAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA--LGVLIYEMAAG 234
Query: 709 KRP 711
P
Sbjct: 235 YPP 237
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 65/139 (46%), Gaps = 21/139 (15%)
Query: 543 DLDQTFIAVKVL--FLHQRGALKSFMAECQALRNIRHRNLV---KIITACSTSDFQGNYF 597
++++ +A+K + F HQ ++ + E + L RH N++ II A + + Y
Sbjct: 65 NVNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYL 123
Query: 598 R-----ALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPS 652
A +Y+ + L S I FL + + L+Y+H ++H DLKPS
Sbjct: 124 VTHLMGADLYKLLKTQHL-SNDHICYFLYQ------ILRGLKYIH---SANVLHRDLKPS 173
Query: 653 NVLLDNDMTAHMGDFGLTR 671
N+LL+ + DFGL R
Sbjct: 174 NLLLNTTXDLKICDFGLAR 192
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 58/128 (45%), Gaps = 9/128 (7%)
Query: 549 IAVKVLFLHQRGAL--KSFMAECQALRNIRHRN---LVKIITACSTSDFQGNYFRALVYE 603
+A+K L+ + L K E + L+++RH N L+ + T T D +++ + +
Sbjct: 53 VAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM 112
Query: 604 FMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAH 663
G L + L R + + L Y+H I+H DLKP N+ ++ D
Sbjct: 113 GTDLGKLMKHEK-LGEDRIQFLVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELK 168
Query: 664 MGDFGLTR 671
+ DFGL R
Sbjct: 169 ILDFGLAR 176
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 69/164 (42%), Gaps = 24/164 (14%)
Query: 520 RKDLLLNVSYESLVK------ATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALR 573
R+DL N +E + + VYK A KV+ L+ ++ E + L
Sbjct: 4 RRDLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILA 63
Query: 574 NIRHRNLVKIITACSTSDFQGNYFRA----LVYEFMHHGSLESCPRILSFLRRL---NIA 626
H +VK++ G Y+ ++ EF G++++ +L R L I
Sbjct: 64 TCDHPYIVKLL---------GAYYHDGKLWIMIEFCPGGAVDAI--MLELDRGLTEPQIQ 112
Query: 627 IDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLT 670
+ LE L+ K I+H DLK NVL+ + + DFG++
Sbjct: 113 VVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVS 156
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 57/127 (44%), Gaps = 18/127 (14%)
Query: 624 NIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCS 683
I + AL +L + K I+H D+KPSN+LLD + DFG++ + + ++ + +
Sbjct: 129 KITLATVKALNHLKENLK--IIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDA 186
Query: 684 SVGLKGTVGYATPEYGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALP--------DQIL 735
G Y PE I G SD+++ G+ L+ P DQ+
Sbjct: 187 -----GCRPYMAPE-RIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLT 240
Query: 736 QVL--DP 740
QV+ DP
Sbjct: 241 QVVKGDP 247
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 37.0 bits (84), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 8/64 (12%)
Query: 613 CPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLL-----DNDMTAHMGDF 667
C R S L IAI + S +EY+H K +++ D+KP N L+ H+ DF
Sbjct: 98 CDRTFSLKTVLMIAIQLISRMEYVH---SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDF 154
Query: 668 GLTR 671
GL +
Sbjct: 155 GLAK 158
>pdb|4B8C|D Chain D, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|J Chain J, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|K Chain K, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|L Chain L, Nuclease Module Of The Yeast Ccr4-Not Complex
Length = 727
Score = 37.0 bits (84), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 8/94 (8%)
Query: 12 SKVDDDPFGALSTWNDSVNFCQWLGVTCSL-KYQRVILLNLSGQNLTGTASPYIGNLTFL 70
SK DD + AL N Q ++ ++ KY + L L+G +LT + I NL+ L
Sbjct: 219 SKYDDQLWHALDLSN-----LQIFNISANIFKYDFLTRLYLNGNSLTELPAE-IKNLSNL 272
Query: 71 RLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNAL 104
R+++L N +S +P E+G F+L++ F N +
Sbjct: 273 RVLDLSHNRLTS-LPAELGSCFQLKYFYFFDNMV 305
Score = 32.3 bits (72), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 56/117 (47%), Gaps = 13/117 (11%)
Query: 336 IPSSLGNFTFLTELNLCGNSIRGSVPSALGSCHQLW-LDLSHNHLTGPIPLAVGNPKSIP 394
I +++ + FLT L L GNS+ +P+ + + L LDLSHN LT +P +G+ +
Sbjct: 239 ISANIFKYDFLTRLYLNGNSL-TELPAEIKNLSNLRVLDLSHNRLTS-LPAELGSCFQLK 296
Query: 395 HLDLSKNELSGEIPSSLAWIFGYISIFAKLNLSYNNLDGDVPRKMIFKNASAISEAG 451
+ N + ++L W FG + NL + ++G+ K K + S G
Sbjct: 297 YFYFFDN-----MVTTLPWEFGNLC-----NLQFLGVEGNPLEKQFLKILTEKSVTG 343
Score = 32.3 bits (72), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 335 EIPSSLGNFTFLTELNLCGNSIRGSVPSALGSCHQLWLDLSHNHLTGPIPLAVGNPKSIP 394
E+P+ + N + L L+L N + S+P+ LGSC QL +++ +P GN ++
Sbjct: 261 ELPAEIKNLSNLRVLDLSHNRL-TSLPAELGSCFQLKYFYFFDNMVTTLPWEFGNLCNLQ 319
Query: 395 HLDLSKNELSGEI 407
L + N L +
Sbjct: 320 FLGVEGNPLEKQF 332
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 37.0 bits (84), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 69/164 (42%), Gaps = 24/164 (14%)
Query: 520 RKDLLLNVSYESLVK------ATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALR 573
R+DL N +E + + VYK A KV+ L+ ++ E + L
Sbjct: 12 RRDLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILA 71
Query: 574 NIRHRNLVKIITACSTSDFQGNYFRA----LVYEFMHHGSLESCPRILSFLRRL---NIA 626
H +VK++ G Y+ ++ EF G++++ +L R L I
Sbjct: 72 TCDHPYIVKLL---------GAYYHDGKLWIMIEFCPGGAVDAI--MLELDRGLTEPQIQ 120
Query: 627 IDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLT 670
+ LE L+ K I+H DLK NVL+ + + DFG++
Sbjct: 121 VVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVS 164
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 37.0 bits (84), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 64/139 (46%), Gaps = 21/139 (15%)
Query: 543 DLDQTFIAVKVL--FLHQRGALKSFMAECQALRNIRHRNLV---KIITACSTSDFQGNY- 596
+L++ +A+K + F HQ ++ + E + L RH N++ II A + + Y
Sbjct: 49 NLNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYI 107
Query: 597 ----FRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPS 652
+Y+ + L S I FL + + L+Y+H ++H DLKPS
Sbjct: 108 VQDLMETDLYKLLKCQHL-SNDHICYFLYQ------ILRGLKYIH---SANVLHRDLKPS 157
Query: 653 NVLLDNDMTAHMGDFGLTR 671
N+LL+ + DFGL R
Sbjct: 158 NLLLNTTCDLKICDFGLAR 176
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 36.6 bits (83), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 21/139 (15%)
Query: 543 DLDQTFIAVKVL--FLHQRGALKSFMAECQALRNIRHRNLV---KIITACSTSDFQGNY- 596
++++ +A+K + F HQ ++ + E + L RH N++ II A + + Y
Sbjct: 45 NVNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYI 103
Query: 597 ----FRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPS 652
+Y+ + L S I FL + + L+Y+H ++H DLKPS
Sbjct: 104 VQDLMETDLYKLLKTQHL-SNDHICYFLYQ------ILRGLKYIH---SANVLHRDLKPS 153
Query: 653 NVLLDNDMTAHMGDFGLTR 671
N+LL+ + DFGL R
Sbjct: 154 NLLLNTTXDLKICDFGLAR 172
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 49/123 (39%), Gaps = 26/123 (21%)
Query: 610 LESCP--RILSFLRRLN---------IAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN 658
+E P + S LRR+ A + EYLH +++ DLKP N+L+D
Sbjct: 120 MEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQ 176
Query: 659 DMTAHMGDFGLTRFI----------PEVMSSNQCSSVGLKGTVGYATPEYGILLLEIFTG 708
+ DFG + + PE ++ S G V + G+L+ E+ G
Sbjct: 177 QGYIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA--LGVLIYEMAAG 234
Query: 709 KRP 711
P
Sbjct: 235 YPP 237
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 6/62 (9%)
Query: 600 LVYEFMHHGSLESCPRILSFLRRLNIAI---DVASALEYLHHHCKKPIVHCDLKPSNVLL 656
LV+E M GS+ S L ++ DVASAL++LH+ K I H DLKP N+L
Sbjct: 88 LVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHN---KGIAHRDLKPENILC 144
Query: 657 DN 658
++
Sbjct: 145 EH 146
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 55/139 (39%), Gaps = 30/139 (21%)
Query: 592 FQGNYFRALVYEFMHHGSLESCPRILSFLRRLN---------IAIDVASALEYLHHHCKK 642
F+ N +V E++ G + S LRR+ A + EYLH
Sbjct: 110 FKDNSNLYMVMEYVAGGEM------FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL--- 160
Query: 643 PIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI----------PEVMSSNQCSSVGLKGTVG 692
+++ DLKP N+L+D + DFG + + PE ++ S G V
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEALAPEIILSKGYNKAVD 220
Query: 693 YATPEYGILLLEIFTGKRP 711
+ G+L+ E+ G P
Sbjct: 221 WWA--LGVLIYEMAAGYPP 237
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 85/192 (44%), Gaps = 40/192 (20%)
Query: 549 IAVKVLFLHQRGAL----KSFMAECQALRNIRHR-NLVKIITACSTS--------DFQ-- 593
+AVK+L + GA ++ M+E + L +I H N+V ++ AC+ +F
Sbjct: 61 VAVKML---KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKF 117
Query: 594 GN---YFRALVYEFMHHGSLESCPR-ILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDL 649
GN Y R+ EF+ + + E + L+ + + VA +E+L + +H DL
Sbjct: 118 GNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDL 174
Query: 650 KPSNVLLDNDMTAHMGDFGLTRFI---PEVMSSNQCSSVGLKG-----------TVGYAT 695
N+LL + DFGL R I P+ + + + LK T+
Sbjct: 175 AARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD-ARLPLKWMAPETIFDRVYTIQSDV 233
Query: 696 PEYGILLLEIFT 707
+G+LL EIF+
Sbjct: 234 WSFGVLLWEIFS 245
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 36.6 bits (83), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 50/123 (40%), Gaps = 26/123 (21%)
Query: 610 LESCP--RILSFLRRLN---------IAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN 658
+E P + S LRR+ A + EYLH +++ DLKP N+++D
Sbjct: 120 MEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQ 176
Query: 659 DMTAHMGDFGLTRFI----------PEVMSSNQCSSVGLKGTVGYATPEYGILLLEIFTG 708
+ DFGL + + PE ++ S G V + G+L+ E+ G
Sbjct: 177 QGYIKVTDFGLAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA--LGVLIYEMAAG 234
Query: 709 KRP 711
P
Sbjct: 235 YPP 237
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 36.6 bits (83), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 21/139 (15%)
Query: 543 DLDQTFIAVKVL--FLHQRGALKSFMAECQALRNIRHRNLV---KIITACSTSDFQGNY- 596
++++ +A+K + F HQ ++ + E + L RH N++ II A + + Y
Sbjct: 45 NVNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYI 103
Query: 597 ----FRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPS 652
+Y+ + L S I FL + + L+Y+H ++H DLKPS
Sbjct: 104 VQDLMETDLYKLLKTQHL-SNDHICYFLYQ------ILRGLKYIH---SANVLHRDLKPS 153
Query: 653 NVLLDNDMTAHMGDFGLTR 671
N+LL+ + DFGL R
Sbjct: 154 NLLLNTTXDLKICDFGLAR 172
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 36.6 bits (83), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Query: 631 SALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGT 690
++YLH++ ++H DLK N+ L++DM +GDFGL I + L GT
Sbjct: 137 QGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKI----EFDGERKKDLCGT 189
Query: 691 VGYATPE 697
Y PE
Sbjct: 190 PNYIAPE 196
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 36.6 bits (83), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 8/64 (12%)
Query: 613 CPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLL-----DNDMTAHMGDF 667
C R + L IAI + S +EY+H K +++ D+KP N L+ + H+ DF
Sbjct: 90 CDRTFTLKTVLMIAIQLLSRMEYVH---SKNLIYRDVKPENFLIGRQGNKKEHVIHIIDF 146
Query: 668 GLTR 671
GL +
Sbjct: 147 GLAK 150
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 36.2 bits (82), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 51/121 (42%), Gaps = 27/121 (22%)
Query: 626 AIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSV 685
A ++ LE++H+ + +V+ DLKP+N+LLD + D GL + +SV
Sbjct: 298 AAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLA---CDFSKKKPHASV 351
Query: 686 GLKGTVGYATPEY----------------GILLLEIFTGKRPTSDMFTEGLDLHNFVKMA 729
GT GY PE G +L ++ G P T+ D H +M
Sbjct: 352 ---GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK--DKHEIDRMT 406
Query: 730 L 730
L
Sbjct: 407 L 407
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 36.2 bits (82), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 51/121 (42%), Gaps = 27/121 (22%)
Query: 626 AIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSV 685
A ++ LE++H+ + +V+ DLKP+N+LLD + D GL + +SV
Sbjct: 298 AAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLA---CDFSKKKPHASV 351
Query: 686 GLKGTVGYATPEY----------------GILLLEIFTGKRPTSDMFTEGLDLHNFVKMA 729
GT GY PE G +L ++ G P T+ D H +M
Sbjct: 352 ---GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK--DKHEIDRMT 406
Query: 730 L 730
L
Sbjct: 407 L 407
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 36.2 bits (82), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 51/121 (42%), Gaps = 27/121 (22%)
Query: 626 AIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSV 685
A ++ LE++H+ + +V+ DLKP+N+LLD + D GL + +SV
Sbjct: 297 AAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLA---CDFSKKKPHASV 350
Query: 686 GLKGTVGYATPEY----------------GILLLEIFTGKRPTSDMFTEGLDLHNFVKMA 729
GT GY PE G +L ++ G P T+ D H +M
Sbjct: 351 ---GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK--DKHEIDRMT 405
Query: 730 L 730
L
Sbjct: 406 L 406
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 36.2 bits (82), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 55/139 (39%), Gaps = 30/139 (21%)
Query: 592 FQGNYFRALVYEFMHHGSLESCPRILSFLRRLN---------IAIDVASALEYLHHHCKK 642
F+ N +V E++ G + S LRR+ A + EYLH
Sbjct: 110 FKDNSNLYMVMEYVAGGEM------FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL--- 160
Query: 643 PIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI----------PEVMSSNQCSSVGLKGTVG 692
+++ DLKP N+L+D + DFG + + PE ++ S G V
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVD 220
Query: 693 YATPEYGILLLEIFTGKRP 711
+ G+L+ E+ G P
Sbjct: 221 WWA--LGVLIYEMAAGYPP 237
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 36.2 bits (82), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 49/123 (39%), Gaps = 26/123 (21%)
Query: 610 LESCP--RILSFLRRLN---------IAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN 658
+E P + S LRR+ A + EYLH +++ DLKP N+L+D
Sbjct: 120 MEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQ 176
Query: 659 DMTAHMGDFGLTRFI----------PEVMSSNQCSSVGLKGTVGYATPEYGILLLEIFTG 708
+ DFG + + PE ++ S G V + G+L+ E+ G
Sbjct: 177 QGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA--LGVLIYEMAAG 234
Query: 709 KRP 711
P
Sbjct: 235 YPP 237
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 36.2 bits (82), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 69/161 (42%), Gaps = 31/161 (19%)
Query: 528 SYESLVK------ATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRN 579
YE L K TV+K +A+K + L G S + E L+ ++H+N
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKN 62
Query: 580 LVKIITACSTSDFQGNYFRALVYEFMHHG---SLESC-----PRIL-SFLRRLNIAIDVA 630
+V++ + LV+EF +SC P I+ SFL +L
Sbjct: 63 IVRLHDV-----LHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQL------L 111
Query: 631 SALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTR 671
L + H + ++H DLKP N+L++ + + +FGL R
Sbjct: 112 KGLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLAR 149
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 36.2 bits (82), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 49/123 (39%), Gaps = 26/123 (21%)
Query: 610 LESCP--RILSFLRRLN---------IAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN 658
+E P + S LRR+ A + EYLH +++ DLKP N+L+D
Sbjct: 120 MEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQ 176
Query: 659 DMTAHMGDFGLTRFI----------PEVMSSNQCSSVGLKGTVGYATPEYGILLLEIFTG 708
+ DFG + + PE ++ S G V + G+L+ E+ G
Sbjct: 177 QGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA--LGVLIYEMAAG 234
Query: 709 KRP 711
P
Sbjct: 235 YPP 237
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 36.2 bits (82), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 49/123 (39%), Gaps = 26/123 (21%)
Query: 610 LESCP--RILSFLRRLN---------IAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN 658
+E P + S LRR+ A + EYLH +++ DLKP N+L+D
Sbjct: 121 MEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQ 177
Query: 659 DMTAHMGDFGLTRFI----------PEVMSSNQCSSVGLKGTVGYATPEYGILLLEIFTG 708
+ DFG + + PE ++ S G V + G+L+ E+ G
Sbjct: 178 QGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA--LGVLIYEMAAG 235
Query: 709 KRP 711
P
Sbjct: 236 YPP 238
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 36.2 bits (82), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 49/123 (39%), Gaps = 26/123 (21%)
Query: 610 LESCP--RILSFLRRLN---------IAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN 658
+E P + S LRR+ A + EYLH +++ DLKP N+L+D
Sbjct: 120 MEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQ 176
Query: 659 DMTAHMGDFGLTRFI----------PEVMSSNQCSSVGLKGTVGYATPEYGILLLEIFTG 708
+ DFG + + PE ++ S G V + G+L+ E+ G
Sbjct: 177 QGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA--LGVLIYEMAAG 234
Query: 709 KRP 711
P
Sbjct: 235 YPP 237
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 36.2 bits (82), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 49/123 (39%), Gaps = 26/123 (21%)
Query: 610 LESCP--RILSFLRRLN---------IAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN 658
+E P + S LRR+ A + EYLH +++ DLKP N+L+D
Sbjct: 120 MEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQ 176
Query: 659 DMTAHMGDFGLTRFI----------PEVMSSNQCSSVGLKGTVGYATPEYGILLLEIFTG 708
+ DFG + + PE ++ S G V + G+L+ E+ G
Sbjct: 177 QGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA--LGVLIYEMAAG 234
Query: 709 KRP 711
P
Sbjct: 235 YPP 237
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 36.2 bits (82), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 49/123 (39%), Gaps = 26/123 (21%)
Query: 610 LESCP--RILSFLRRLN---------IAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN 658
+E P + S LRR+ A + EYLH +++ DLKP N+L+D
Sbjct: 121 MEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQ 177
Query: 659 DMTAHMGDFGLTRFI----------PEVMSSNQCSSVGLKGTVGYATPEYGILLLEIFTG 708
+ DFG + + PE ++ S G V + G+L+ E+ G
Sbjct: 178 QGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA--LGVLIYEMAAG 235
Query: 709 KRP 711
P
Sbjct: 236 YPP 238
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 36.2 bits (82), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 55/139 (39%), Gaps = 30/139 (21%)
Query: 592 FQGNYFRALVYEFMHHGSLESCPRILSFLRRLN---------IAIDVASALEYLHHHCKK 642
F+ N +V E++ G + S LRR+ A + EYLH
Sbjct: 110 FKDNSNLYMVMEYVAGGEM------FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL--- 160
Query: 643 PIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI----------PEVMSSNQCSSVGLKGTVG 692
+++ DLKP N+L+D + DFG + + PE ++ S G V
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLAGTPEYLAPEIILSKGYNKAVD 220
Query: 693 YATPEYGILLLEIFTGKRP 711
+ G+L+ E+ G P
Sbjct: 221 WWA--LGVLIYEMAAGYPP 237
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 36.2 bits (82), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 51/121 (42%), Gaps = 27/121 (22%)
Query: 626 AIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSV 685
A ++ LE++H+ + +V+ DLKP+N+LLD + D GL + +SV
Sbjct: 298 AAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLA---CDFSKKKPHASV 351
Query: 686 GLKGTVGYATPEY----------------GILLLEIFTGKRPTSDMFTEGLDLHNFVKMA 729
GT GY PE G +L ++ G P T+ D H +M
Sbjct: 352 ---GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK--DKHEIDRMT 406
Query: 730 L 730
L
Sbjct: 407 L 407
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 36.2 bits (82), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 55/139 (39%), Gaps = 30/139 (21%)
Query: 592 FQGNYFRALVYEFMHHGSLESCPRILSFLRRLN---------IAIDVASALEYLHHHCKK 642
F+ N +V E++ G + S LRR+ A + EYLH
Sbjct: 110 FKDNSNLYMVMEYVAGGEM------FSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL--- 160
Query: 643 PIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI----------PEVMSSNQCSSVGLKGTVG 692
+++ DLKP N+L+D + DFG + + PE ++ S G V
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVD 220
Query: 693 YATPEYGILLLEIFTGKRP 711
+ G+L+ E+ G P
Sbjct: 221 WWA--LGVLIYEMAAGYPP 237
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 36.2 bits (82), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 55/139 (39%), Gaps = 30/139 (21%)
Query: 592 FQGNYFRALVYEFMHHGSLESCPRILSFLRRLN---------IAIDVASALEYLHHHCKK 642
F+ N +V E++ G + S LRR+ A + EYLH
Sbjct: 110 FKDNSNLYMVMEYVAGGEM------FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL--- 160
Query: 643 PIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI----------PEVMSSNQCSSVGLKGTVG 692
+++ DLKP N+L+D + DFG + + PE ++ S G V
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVD 220
Query: 693 YATPEYGILLLEIFTGKRP 711
+ G+L+ E+ G P
Sbjct: 221 WWA--LGVLIYEMAAGYPP 237
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 36.2 bits (82), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 49/123 (39%), Gaps = 26/123 (21%)
Query: 610 LESCP--RILSFLRRLN---------IAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN 658
+E P + S LRR+ A + EYLH +++ DLKP N+L+D
Sbjct: 121 MEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQ 177
Query: 659 DMTAHMGDFGLTRFI----------PEVMSSNQCSSVGLKGTVGYATPEYGILLLEIFTG 708
+ DFG + + PE ++ S G V + G+L+ E+ G
Sbjct: 178 QGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA--LGVLIYEMAAG 235
Query: 709 KRP 711
P
Sbjct: 236 YPP 238
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 36.2 bits (82), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 55/139 (39%), Gaps = 30/139 (21%)
Query: 592 FQGNYFRALVYEFMHHGSLESCPRILSFLRRLN---------IAIDVASALEYLHHHCKK 642
F+ N +V E++ G + S LRR+ A + EYLH
Sbjct: 110 FKDNSNLYMVMEYVAGGEM------FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL--- 160
Query: 643 PIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI----------PEVMSSNQCSSVGLKGTVG 692
+++ DLKP N+L+D + DFG + + PE ++ S G V
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVD 220
Query: 693 YATPEYGILLLEIFTGKRP 711
+ G+L+ E+ G P
Sbjct: 221 WWA--LGVLIYEMAAGYPP 237
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 36.2 bits (82), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 55/139 (39%), Gaps = 30/139 (21%)
Query: 592 FQGNYFRALVYEFMHHGSLESCPRILSFLRRLN---------IAIDVASALEYLHHHCKK 642
F+ N +V E++ G + S LRR+ A + EYLH
Sbjct: 110 FKDNSNLYMVMEYVAGGEM------FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL--- 160
Query: 643 PIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI----------PEVMSSNQCSSVGLKGTVG 692
+++ DLKP N+L+D + DFG + + PE ++ S G V
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLXGTPEYLAPEIILSKGYNKAVD 220
Query: 693 YATPEYGILLLEIFTGKRP 711
+ G+L+ E+ G P
Sbjct: 221 WWA--LGVLIYEMAAGYPP 237
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 36.2 bits (82), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 49/123 (39%), Gaps = 26/123 (21%)
Query: 610 LESCP--RILSFLRRLN---------IAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN 658
+E P + S LRR+ A + EYLH +++ DLKP N+L+D
Sbjct: 113 MEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQ 169
Query: 659 DMTAHMGDFGLTRFI----------PEVMSSNQCSSVGLKGTVGYATPEYGILLLEIFTG 708
+ DFG + + PE ++ S G V + G+L+ E+ G
Sbjct: 170 QGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA--LGVLIYEMAAG 227
Query: 709 KRP 711
P
Sbjct: 228 YPP 230
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 36.2 bits (82), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 55/139 (39%), Gaps = 30/139 (21%)
Query: 592 FQGNYFRALVYEFMHHGSLESCPRILSFLRRLN---------IAIDVASALEYLHHHCKK 642
F+ N +V E++ G + S LRR+ A + EYLH
Sbjct: 110 FKDNSNLYMVMEYVAGGEM------FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL--- 160
Query: 643 PIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI----------PEVMSSNQCSSVGLKGTVG 692
+++ DLKP N+L+D + DFG + + PE ++ S G V
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVD 220
Query: 693 YATPEYGILLLEIFTGKRP 711
+ G+L+ E+ G P
Sbjct: 221 WWA--LGVLIYEMAAGYPP 237
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 36.2 bits (82), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 55/139 (39%), Gaps = 30/139 (21%)
Query: 592 FQGNYFRALVYEFMHHGSLESCPRILSFLRRLN---------IAIDVASALEYLHHHCKK 642
F+ N +V E++ G + S LRR+ A + EYLH
Sbjct: 110 FKDNSNLYMVMEYVAGGEM------FSHLRRIGRFAEPHARFYAAQIVLTFEYLHSL--- 160
Query: 643 PIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI----------PEVMSSNQCSSVGLKGTVG 692
+++ DLKP N+L+D + DFG + + PE ++ S G V
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVD 220
Query: 693 YATPEYGILLLEIFTGKRP 711
+ G+L+ E+ G P
Sbjct: 221 WWA--LGVLIYEMAAGYPP 237
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 36.2 bits (82), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 55/139 (39%), Gaps = 30/139 (21%)
Query: 592 FQGNYFRALVYEFMHHGSLESCPRILSFLRRLN---------IAIDVASALEYLHHHCKK 642
F+ N +V E++ G + S LRR+ A + EYLH
Sbjct: 110 FKDNSNLYMVMEYVAGGEM------FSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL--- 160
Query: 643 PIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI----------PEVMSSNQCSSVGLKGTVG 692
+++ DLKP N+L+D + DFG + + PE ++ S G V
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVD 220
Query: 693 YATPEYGILLLEIFTGKRP 711
+ G+L+ E+ G P
Sbjct: 221 WWA--LGVLIYEMAAGYPP 237
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 36.2 bits (82), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 55/139 (39%), Gaps = 30/139 (21%)
Query: 592 FQGNYFRALVYEFMHHGSLESCPRILSFLRRLN---------IAIDVASALEYLHHHCKK 642
F+ N +V E++ G + S LRR+ A + EYLH
Sbjct: 110 FKDNSNLYMVMEYVAGGEM------FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL--- 160
Query: 643 PIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI----------PEVMSSNQCSSVGLKGTVG 692
+++ DLKP N+L+D + DFG + + PE ++ S G V
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVD 220
Query: 693 YATPEYGILLLEIFTGKRP 711
+ G+L+ E+ G P
Sbjct: 221 WWA--LGVLIYEMAAGYPP 237
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 36.2 bits (82), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 21/139 (15%)
Query: 543 DLDQTFIAVKVL--FLHQRGALKSFMAECQALRNIRHRNLV---KIITACSTSDFQGNY- 596
++++ +A+K + F HQ ++ + E + L RH N++ II A + + Y
Sbjct: 53 NVNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYI 111
Query: 597 ----FRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPS 652
+Y+ + L S I FL + + L+Y+H ++H DLKPS
Sbjct: 112 VQDLMETDLYKLLKTQHL-SNDHICYFLYQ------ILRGLKYIH---SANVLHRDLKPS 161
Query: 653 NVLLDNDMTAHMGDFGLTR 671
N+LL+ + DFGL R
Sbjct: 162 NLLLNTTCDLKICDFGLAR 180
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 36.2 bits (82), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 21/139 (15%)
Query: 543 DLDQTFIAVKVL--FLHQRGALKSFMAECQALRNIRHRNLV---KIITACSTSDFQGNY- 596
++++ +A+K + F HQ ++ + E + L RH N++ II A + + Y
Sbjct: 45 NVNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYI 103
Query: 597 ----FRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPS 652
+Y+ + L S I FL + + L+Y+H ++H DLKPS
Sbjct: 104 VQDLMETDLYKLLKTQHL-SNDHICYFLYQ------ILRGLKYIH---SANVLHRDLKPS 153
Query: 653 NVLLDNDMTAHMGDFGLTR 671
N+LL+ + DFGL R
Sbjct: 154 NLLLNTTCDLKICDFGLAR 172
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 36.2 bits (82), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 21/139 (15%)
Query: 543 DLDQTFIAVKVL--FLHQRGALKSFMAECQALRNIRHRNLV---KIITACSTSDFQGNY- 596
+L++ +A++ + F HQ ++ + E + L RH N++ II A + + Y
Sbjct: 49 NLNKVRVAIRKISPFEHQTYCQRT-LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYI 107
Query: 597 ----FRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPS 652
+Y+ + L S I FL + + L+Y+H ++H DLKPS
Sbjct: 108 VQDLMETDLYKLLKTQHL-SNDHICYFLYQ------ILRGLKYIH---SANVLHRDLKPS 157
Query: 653 NVLLDNDMTAHMGDFGLTR 671
N+LL+ + DFGL R
Sbjct: 158 NLLLNTTCDLKICDFGLAR 176
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 36.2 bits (82), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 49/123 (39%), Gaps = 26/123 (21%)
Query: 610 LESCP--RILSFLRRLN---------IAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN 658
+E P + S LRR+ A + EYLH +++ DLKP N+L+D
Sbjct: 113 MEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQ 169
Query: 659 DMTAHMGDFGLTRFI----------PEVMSSNQCSSVGLKGTVGYATPEYGILLLEIFTG 708
+ DFG + + PE ++ S G V + G+L+ E+ G
Sbjct: 170 QGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA--LGVLIYEMAAG 227
Query: 709 KRP 711
P
Sbjct: 228 YPP 230
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 36.2 bits (82), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 55/139 (39%), Gaps = 30/139 (21%)
Query: 592 FQGNYFRALVYEFMHHGSLESCPRILSFLRRLN---------IAIDVASALEYLHHHCKK 642
F+ N +V E++ G + S LRR+ A + EYLH
Sbjct: 105 FKDNSNLYMVMEYVAGGEM------FSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL--- 155
Query: 643 PIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI----------PEVMSSNQCSSVGLKGTVG 692
+++ DLKP N+L+D + DFG + + PE ++ S G V
Sbjct: 156 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVD 215
Query: 693 YATPEYGILLLEIFTGKRP 711
+ G+L+ E+ G P
Sbjct: 216 WWA--LGVLIYEMAAGYPP 232
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 36.2 bits (82), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 49/123 (39%), Gaps = 26/123 (21%)
Query: 610 LESCP--RILSFLRRLN---------IAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN 658
+E P + S LRR+ A + EYLH +++ DLKP N+L+D
Sbjct: 121 MEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQ 177
Query: 659 DMTAHMGDFGLTRFI----------PEVMSSNQCSSVGLKGTVGYATPEYGILLLEIFTG 708
+ DFG + + PE ++ S G V + G+L+ E+ G
Sbjct: 178 QGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA--LGVLIYEMAAG 235
Query: 709 KRP 711
P
Sbjct: 236 YPP 238
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 36.2 bits (82), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 49/123 (39%), Gaps = 26/123 (21%)
Query: 610 LESCP--RILSFLRRLN---------IAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN 658
+E P + S LRR+ A + EYLH +++ DLKP N+L+D
Sbjct: 120 MEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQ 176
Query: 659 DMTAHMGDFGLTRFI----------PEVMSSNQCSSVGLKGTVGYATPEYGILLLEIFTG 708
+ DFG + + PE ++ S G V + G+L+ E+ G
Sbjct: 177 QGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA--LGVLIYEMAAG 234
Query: 709 KRP 711
P
Sbjct: 235 YPP 237
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 36.2 bits (82), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 49/123 (39%), Gaps = 26/123 (21%)
Query: 610 LESCP--RILSFLRRLN---------IAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN 658
+E P + S LRR+ A + EYLH +++ DLKP N+L+D
Sbjct: 120 MEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQ 176
Query: 659 DMTAHMGDFGLTRFI----------PEVMSSNQCSSVGLKGTVGYATPEYGILLLEIFTG 708
+ DFG + + PE ++ S G V + G+L+ E+ G
Sbjct: 177 QGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA--LGVLIYEMAAG 234
Query: 709 KRP 711
P
Sbjct: 235 YPP 237
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 36.2 bits (82), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 49/123 (39%), Gaps = 26/123 (21%)
Query: 610 LESCP--RILSFLRRLN---------IAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN 658
+E P + S LRR+ A + EYLH +++ DLKP N+L+D
Sbjct: 106 MEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQ 162
Query: 659 DMTAHMGDFGLTRFI----------PEVMSSNQCSSVGLKGTVGYATPEYGILLLEIFTG 708
+ DFG + + PE ++ S G V + G+L+ E+ G
Sbjct: 163 QGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWA--LGVLIYEMAAG 220
Query: 709 KRP 711
P
Sbjct: 221 YPP 223
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 36.2 bits (82), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 55/139 (39%), Gaps = 30/139 (21%)
Query: 592 FQGNYFRALVYEFMHHGSLESCPRILSFLRRLN---------IAIDVASALEYLHHHCKK 642
F+ N +V E++ G + S LRR+ A + EYLH
Sbjct: 111 FKDNSNLYMVMEYVAGGEM------FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL--- 161
Query: 643 PIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI----------PEVMSSNQCSSVGLKGTVG 692
+++ DLKP N+L+D + DFG + + PE ++ S G V
Sbjct: 162 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVD 221
Query: 693 YATPEYGILLLEIFTGKRP 711
+ G+L+ E+ G P
Sbjct: 222 WWA--LGVLIYEMAAGYPP 238
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 36.2 bits (82), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 49/123 (39%), Gaps = 26/123 (21%)
Query: 610 LESCP--RILSFLRRLN---------IAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN 658
+E P + S LRR+ A + EYLH +++ DLKP N+L+D
Sbjct: 120 MEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQ 176
Query: 659 DMTAHMGDFGLTRFI----------PEVMSSNQCSSVGLKGTVGYATPEYGILLLEIFTG 708
+ DFG + + PE ++ S G V + G+L+ E+ G
Sbjct: 177 QGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA--LGVLIYEMAAG 234
Query: 709 KRP 711
P
Sbjct: 235 YPP 237
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 36.2 bits (82), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 49/113 (43%), Gaps = 19/113 (16%)
Query: 563 KSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESCPRILSFLRR 622
+ + E + L+ +RH N ++ ++G Y R + L S +L ++
Sbjct: 99 QDIIKEVRFLQKLRHPNTIQ---------YRGCYLREHTAWLVMEYCLGSASDLLEVHKK 149
Query: 623 LNIAIDVAS-------ALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFG 668
+++A+ L YLH H ++H D+K N+LL +GDFG
Sbjct: 150 PLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFG 199
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 36.2 bits (82), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 49/123 (39%), Gaps = 26/123 (21%)
Query: 610 LESCP--RILSFLRRLN---------IAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN 658
+E P + S LRR+ A + EYLH +++ DLKP N+L+D
Sbjct: 121 MEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQ 177
Query: 659 DMTAHMGDFGLTRFI----------PEVMSSNQCSSVGLKGTVGYATPEYGILLLEIFTG 708
+ DFG + + PE ++ S G V + G+L+ E+ G
Sbjct: 178 QGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA--LGVLIYEMAAG 235
Query: 709 KRP 711
P
Sbjct: 236 YPP 238
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 36.2 bits (82), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 49/123 (39%), Gaps = 26/123 (21%)
Query: 610 LESCP--RILSFLRRLN---------IAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN 658
+E P + S LRR+ A + EYLH +++ DLKP N+L+D
Sbjct: 120 MEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQ 176
Query: 659 DMTAHMGDFGLTRFI----------PEVMSSNQCSSVGLKGTVGYATPEYGILLLEIFTG 708
+ DFG + + PE ++ S G V + G+L+ E+ G
Sbjct: 177 QGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA--LGVLIYEMAAG 234
Query: 709 KRP 711
P
Sbjct: 235 YPP 237
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 36.2 bits (82), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 8/68 (11%)
Query: 631 SALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLT-RFIPEVMSSNQCSSVGLKG 689
A+ +H H IVH DLKP+N L+ + M + DFG+ + P+ S + S V G
Sbjct: 122 EAVHTIHQHG---IVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQV---G 174
Query: 690 TVGYATPE 697
TV Y PE
Sbjct: 175 TVNYMPPE 182
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 36.2 bits (82), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 8/68 (11%)
Query: 631 SALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLT-RFIPEVMSSNQCSSVGLKG 689
A+ +H H IVH DLKP+N L+ + M + DFG+ + P+ S + S V G
Sbjct: 138 EAVHTIHQHG---IVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQV---G 190
Query: 690 TVGYATPE 697
TV Y PE
Sbjct: 191 TVNYMPPE 198
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 36.2 bits (82), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 55/139 (39%), Gaps = 30/139 (21%)
Query: 592 FQGNYFRALVYEFMHHGSLESCPRILSFLRRLN---------IAIDVASALEYLHHHCKK 642
F+ N +V E++ G + S LRR+ A + EYLH
Sbjct: 110 FKDNSNLYMVMEYVAGGEM------FSHLRRIGRFXEPHARFYAAQIVLTFEYLHSL--- 160
Query: 643 PIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI----------PEVMSSNQCSSVGLKGTVG 692
+++ DLKP N+L+D + DFG + + PE ++ S G V
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVD 220
Query: 693 YATPEYGILLLEIFTGKRP 711
+ G+L+ E+ G P
Sbjct: 221 WWA--LGVLIYEMAAGYPP 237
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 36.2 bits (82), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 55/139 (39%), Gaps = 30/139 (21%)
Query: 592 FQGNYFRALVYEFMHHGSLESCPRILSFLRRLN---------IAIDVASALEYLHHHCKK 642
F+ N +V E++ G + S LRR+ A + EYLH
Sbjct: 97 FKDNSNLYMVMEYVAGGEM------FSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SL 147
Query: 643 PIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI----------PEVMSSNQCSSVGLKGTVG 692
+++ DLKP N+L+D + DFG + + PE ++ S G V
Sbjct: 148 DLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVD 207
Query: 693 YATPEYGILLLEIFTGKRP 711
+ G+L+ E+ G P
Sbjct: 208 WWA--LGVLIYEMAAGYPP 224
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 36.2 bits (82), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 49/123 (39%), Gaps = 26/123 (21%)
Query: 610 LESCP--RILSFLRRLN---------IAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN 658
+E P + S LRR+ A + EYLH +++ DLKP N+L+D
Sbjct: 121 MEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQ 177
Query: 659 DMTAHMGDFGLTRFI----------PEVMSSNQCSSVGLKGTVGYATPEYGILLLEIFTG 708
+ DFG + + PE ++ S G V + G+L+ E+ G
Sbjct: 178 QGYIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWA--LGVLIYEMAAG 235
Query: 709 KRP 711
P
Sbjct: 236 YPP 238
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 36.2 bits (82), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 21/139 (15%)
Query: 543 DLDQTFIAVKVL--FLHQRGALKSFMAECQALRNIRHRNLV---KIITACSTSDFQGNY- 596
++++ +A+K + F HQ ++ + E + L RH N++ II A + + Y
Sbjct: 45 NVNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYI 103
Query: 597 ----FRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPS 652
+Y+ + L S I FL + + L+Y+H ++H DLKPS
Sbjct: 104 VQDLMETDLYKLLKTQHL-SNDHICYFLYQ------ILRGLKYIH---SANVLHRDLKPS 153
Query: 653 NVLLDNDMTAHMGDFGLTR 671
N+LL+ + DFGL R
Sbjct: 154 NLLLNTTCDLKICDFGLAR 172
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 36.2 bits (82), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 21/139 (15%)
Query: 543 DLDQTFIAVKVL--FLHQRGALKSFMAECQALRNIRHRNLV---KIITACSTSDFQGNY- 596
++++ +A+K + F HQ ++ + E + L RH N++ II A + + Y
Sbjct: 65 NVNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYI 123
Query: 597 ----FRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPS 652
+Y+ + L S I FL + + L+Y+H ++H DLKPS
Sbjct: 124 VQDLMETDLYKLLKTQHL-SNDHICYFLYQ------ILRGLKYIH---SANVLHRDLKPS 173
Query: 653 NVLLDNDMTAHMGDFGLTR 671
N+LL+ + DFGL R
Sbjct: 174 NLLLNTTCDLKICDFGLAR 192
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 36.2 bits (82), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 21/139 (15%)
Query: 543 DLDQTFIAVKVL--FLHQRGALKSFMAECQALRNIRHRNLV---KIITACSTSDFQGNY- 596
++++ +A+K + F HQ ++ + E + L RH N++ II A + + Y
Sbjct: 47 NVNKVRVAIKKISPFEHQTYCQRT-LREIKILLRFRHENIIGINDIIRAPTIEQMKDVYI 105
Query: 597 ----FRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPS 652
+Y+ + L S I FL + + L+Y+H ++H DLKPS
Sbjct: 106 VQDLMETDLYKLLKTQHL-SNDHICYFLYQ------ILRGLKYIH---SANVLHRDLKPS 155
Query: 653 NVLLDNDMTAHMGDFGLTR 671
N+LL+ + DFGL R
Sbjct: 156 NLLLNTTCDLKICDFGLAR 174
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 36.2 bits (82), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 8/67 (11%)
Query: 632 ALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLT-RFIPEVMSSNQCSSVGLKGT 690
A+ +H H IVH DLKP+N L+ + M + DFG+ + P+ S + S V GT
Sbjct: 120 AVHTIHQHG---IVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQV---GT 172
Query: 691 VGYATPE 697
V Y PE
Sbjct: 173 VNYMPPE 179
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 36.2 bits (82), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 49/123 (39%), Gaps = 26/123 (21%)
Query: 610 LESCP--RILSFLRRLN---------IAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN 658
+E P + S LRR+ A + EYLH +++ DLKP N+L+D
Sbjct: 141 MEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQ 197
Query: 659 DMTAHMGDFGLTRFI----------PEVMSSNQCSSVGLKGTVGYATPEYGILLLEIFTG 708
+ DFG + + PE ++ S G V + G+L+ E+ G
Sbjct: 198 QGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA--LGVLIYEMAAG 255
Query: 709 KRP 711
P
Sbjct: 256 YPP 258
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 36.2 bits (82), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 7/66 (10%)
Query: 632 ALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTV 691
++YLH++ ++H DLK N+ L++DM +GDFGL I + L GT
Sbjct: 154 GVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKI----EFDGERKKDLCGTP 206
Query: 692 GYATPE 697
Y PE
Sbjct: 207 NYIAPE 212
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 36.2 bits (82), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 55/139 (39%), Gaps = 30/139 (21%)
Query: 592 FQGNYFRALVYEFMHHGSLESCPRILSFLRRLN---------IAIDVASALEYLHHHCKK 642
F+ N +V E++ G + S LRR+ A + EYLH
Sbjct: 131 FKDNSNLYMVMEYVAGGEM------FSHLRRIGRFXEPHARFYAAQIVLTFEYLH---SL 181
Query: 643 PIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI----------PEVMSSNQCSSVGLKGTVG 692
+++ DLKP N+L+D + DFG + + PE ++ S G V
Sbjct: 182 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVD 241
Query: 693 YATPEYGILLLEIFTGKRP 711
+ G+L+ E+ G P
Sbjct: 242 WWA--LGVLIYEMAAGYPP 258
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 36.2 bits (82), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 36/68 (52%), Gaps = 8/68 (11%)
Query: 631 SALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLT-RFIPEVMSSNQCSSVGLKG 689
A+ +H H IVH DLKP+N L+ + M + DFG+ + P+ S + S V G
Sbjct: 118 EAVHTIHQHG---IVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQV---G 170
Query: 690 TVGYATPE 697
TV Y PE
Sbjct: 171 TVNYMPPE 178
>pdb|2LAV|A Chain A, Nmr Solution Structure Of Human Vaccinia-Related Kinase 1
Length = 361
Score = 36.2 bits (82), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 6/56 (10%)
Query: 623 LNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD--NDMTAHMGDFGLT-RFIPE 675
L +++ + LEY+H H VH D+K SN+LL+ N ++ D+GL R+ PE
Sbjct: 155 LQLSLRILDILEYIHEH---EYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPE 207
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 36.2 bits (82), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 55/139 (39%), Gaps = 30/139 (21%)
Query: 592 FQGNYFRALVYEFMHHGSLESCPRILSFLRRLN---------IAIDVASALEYLHHHCKK 642
F+ N +V E++ G + S LRR+ A + EYLH
Sbjct: 131 FKDNSNLYMVMEYVAGGEM------FSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SL 181
Query: 643 PIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI----------PEVMSSNQCSSVGLKGTVG 692
+++ DLKP N+L+D + DFG + + PE ++ S G V
Sbjct: 182 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWTLCGTPEYLAPEIILSKGYNKAVD 241
Query: 693 YATPEYGILLLEIFTGKRP 711
+ G+L+ E+ G P
Sbjct: 242 WWA--LGVLIYEMAAGYPP 258
>pdb|2KTY|A Chain A, Solution Structure Of Human Vaccinia Related Kinase-1
pdb|2KUL|A Chain A, Solution Structure Of Human Vaccinia Related Kinase
1(Vrk1)
Length = 368
Score = 36.2 bits (82), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 6/56 (10%)
Query: 623 LNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD--NDMTAHMGDFGLT-RFIPE 675
L +++ + LEY+H H VH D+K SN+LL+ N ++ D+GL R+ PE
Sbjct: 155 LQLSLRILDILEYIHEH---EYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPE 207
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 36.2 bits (82), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 55/139 (39%), Gaps = 30/139 (21%)
Query: 592 FQGNYFRALVYEFMHHGSLESCPRILSFLRRLN---------IAIDVASALEYLHHHCKK 642
F+ N +V E++ G + S LRR+ A + EYLH
Sbjct: 110 FKDNSNLYMVMEYVAGGEM------FSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SL 160
Query: 643 PIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI----------PEVMSSNQCSSVGLKGTVG 692
+++ DLKP N+L+D + DFG + + PE ++ S G V
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVD 220
Query: 693 YATPEYGILLLEIFTGKRP 711
+ G+L+ E+ G P
Sbjct: 221 WWA--LGVLIYEMAAGYPP 237
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 36.2 bits (82), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 632 ALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTV 691
++YLH++ ++H DLK N+ L++DM +GDFGL I E + + L GT
Sbjct: 154 GVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKI-EFDGERKKT---LCGTP 206
Query: 692 GYATPE 697
Y PE
Sbjct: 207 NYIAPE 212
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 36.2 bits (82), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 8/67 (11%)
Query: 632 ALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLT-RFIPEVMSSNQCSSVGLKGT 690
A+ +H H IVH DLKP+N L+ + M + DFG+ + P+ S + S V GT
Sbjct: 167 AVHTIHQHG---IVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQV---GT 219
Query: 691 VGYATPE 697
V Y PE
Sbjct: 220 VNYMPPE 226
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 35.8 bits (81), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 6/45 (13%)
Query: 629 VASALEYLHHHCKKPIVHCDLKPSNVLLDN---DMTAHMGDFGLT 670
V S + Y+H H IVH DLKP N+LL++ D + DFGL+
Sbjct: 130 VFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLS 171
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 35.8 bits (81), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 7/66 (10%)
Query: 632 ALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTV 691
++YLH++ ++H DLK N+ L++DM +GDFGL I + L GT
Sbjct: 154 GVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKI----EFDGERKKXLCGTP 206
Query: 692 GYATPE 697
Y PE
Sbjct: 207 NYIAPE 212
>pdb|3OP5|A Chain A, Human Vaccinia-Related Kinase 1
pdb|3OP5|B Chain B, Human Vaccinia-Related Kinase 1
pdb|3OP5|C Chain C, Human Vaccinia-Related Kinase 1
pdb|3OP5|D Chain D, Human Vaccinia-Related Kinase 1
Length = 364
Score = 35.8 bits (81), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 6/56 (10%)
Query: 623 LNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD--NDMTAHMGDFGLT-RFIPE 675
L +++ + LEY+H H VH D+K SN+LL+ N ++ D+GL R+ PE
Sbjct: 155 LQLSLRILDILEYIHEH---EYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPE 207
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 35.8 bits (81), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 49/123 (39%), Gaps = 26/123 (21%)
Query: 610 LESCP--RILSFLRRLN---------IAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN 658
+E P + S LRR+ A + EYLH +++ DLKP N+++D
Sbjct: 120 MEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQ 176
Query: 659 DMTAHMGDFGLTRFI----------PEVMSSNQCSSVGLKGTVGYATPEYGILLLEIFTG 708
+ DFG + + PE ++ S G V + G+L+ E+ G
Sbjct: 177 QGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA--LGVLIYEMAAG 234
Query: 709 KRP 711
P
Sbjct: 235 YPP 237
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 35.8 bits (81), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 83/191 (43%), Gaps = 41/191 (21%)
Query: 549 IAVKVLFLHQRGAL----KSFMAECQALRNIRHR-NLVKIITACSTS--------DFQ-- 593
+AVK+L + GA ++ M+E + L +I H N+V ++ AC+ +F
Sbjct: 60 VAVKML---KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKF 116
Query: 594 GN---YFRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLK 650
GN Y R+ EF+ + L L+ + + VA +E+L + +H DL
Sbjct: 117 GNLSTYLRSKRNEFVPYKDLYK--DFLTLEHLICYSFQVAKGMEFL---ASRKXIHRDLA 171
Query: 651 PSNVLLDNDMTAHMGDFGLTRFI---PEVMSSNQCSSVGLKG-----------TVGYATP 696
N+LL + DFGL R I P+ + + + LK T+
Sbjct: 172 ARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD-ARLPLKWMAPETIFDRVYTIQSDVW 230
Query: 697 EYGILLLEIFT 707
+G+LL EIF+
Sbjct: 231 SFGVLLWEIFS 241
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 35.8 bits (81), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 58/145 (40%), Gaps = 22/145 (15%)
Query: 562 LKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESC-------- 613
LK E ++ HR+L F+ N F +V E SL
Sbjct: 80 LKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALT 139
Query: 614 -PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRF 672
P +LR++ + +YLH + ++H DLK N+ L+ D+ +GDFGL
Sbjct: 140 EPEARYYLRQIVLGC------QYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLAT- 189
Query: 673 IPEVMSSNQCSSVGLKGTVGYATPE 697
+V + V L GT Y PE
Sbjct: 190 --KVEYDGERKKV-LCGTPNYIAPE 211
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 35.8 bits (81), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 63/156 (40%), Gaps = 24/156 (15%)
Query: 549 IAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHG 608
+A K++ + E + + H NL+++ A F+ LV E++ G
Sbjct: 117 LAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDA-----FESKNDIVLVMEYVDGG 171
Query: 609 SLESCPRILSF---LRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMG 665
L RI+ L L+ + + E + H + I+H DLKP N+L N +
Sbjct: 172 EL--FDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIK 229
Query: 666 --DFGLT-RFIPEVMSSNQCSSVGLKGTVGYATPEY 698
DFGL R+ P K V + TPE+
Sbjct: 230 IIDFGLARRYKPRE-----------KLKVNFGTPEF 254
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 35.8 bits (81), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 8/67 (11%)
Query: 632 ALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLT-RFIPEVMSSNQCSSVGLKGT 690
A+ +H H IVH DLKP+N L+ + M + DFG+ + P+ S + S V GT
Sbjct: 167 AVHTIHQHG---IVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQV---GT 219
Query: 691 VGYATPE 697
V Y PE
Sbjct: 220 VNYMPPE 226
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 35.8 bits (81), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 61/141 (43%), Gaps = 20/141 (14%)
Query: 563 KSFMAECQALRNIRHRNLVKIIT----ACSTSDFQGNYFRALVYEFMHHG--SLESCPRI 616
K E + L++++H N++ ++ A S +F Y LV M ++ C ++
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQKL 122
Query: 617 LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676
+ I + L+Y+H I+H DLKPSN+ ++ D + FGL R +
Sbjct: 123 TDDHVQFLI-YQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDE 178
Query: 677 MSSNQCSSVGLKGTVGYATPE 697
M+ G T Y PE
Sbjct: 179 MT-------GYVATRWYRAPE 192
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 35.8 bits (81), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 58/145 (40%), Gaps = 22/145 (15%)
Query: 562 LKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESC-------- 613
LK E ++ HR+L F+ N F +V E SL
Sbjct: 78 LKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALT 137
Query: 614 -PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRF 672
P +LR++ + +YLH + ++H DLK N+ L+ D+ +GDFGL
Sbjct: 138 EPEARYYLRQIVLGC------QYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLAT- 187
Query: 673 IPEVMSSNQCSSVGLKGTVGYATPE 697
+V + V L GT Y PE
Sbjct: 188 --KVEYDGERKKV-LCGTPNYIAPE 209
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 35.8 bits (81), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 49/113 (43%), Gaps = 19/113 (16%)
Query: 563 KSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESCPRILSFLRR 622
+ + E + L+ +RH N ++ ++G Y R + L S +L ++
Sbjct: 60 QDIIKEVRFLQKLRHPNTIQ---------YRGCYLREHTAWLVMEYCLGSASDLLEVHKK 110
Query: 623 LNIAIDVAS-------ALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFG 668
+++A+ L YLH H ++H D+K N+LL +GDFG
Sbjct: 111 PLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFG 160
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 58/139 (41%), Gaps = 25/139 (17%)
Query: 568 ECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESCPRI------LSFLR 621
E + + H L+ + A F+ Y L+ EF+ G L RI +S
Sbjct: 98 EISIMNQLHHPKLINLHDA-----FEDKYEMVLILEFLSGGEL--FDRIAAEDYKMSEAE 150
Query: 622 RLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMG--DFGL-TRFIPEVMS 678
+N L+++H H IVH D+KP N++ + + + DFGL T+ P+ +
Sbjct: 151 VINYMRQACEGLKHMHEHS---IVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIV 207
Query: 679 SNQCSSVGLKGTVGYATPE 697
+ T +A PE
Sbjct: 208 KVTTA------TAEFAAPE 220
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 21/139 (15%)
Query: 543 DLDQTFIAVKVL--FLHQRGALKSFMAECQALRNIRHRNLV---KIITACSTSDFQGNY- 596
++++ +A+K + F HQ ++ + E + L RH N++ II A + + Y
Sbjct: 47 NVNKVRVAIKKISPFEHQTYCQRT-LREIKILLAFRHENIIGINDIIRAPTIEQMKDVYI 105
Query: 597 ----FRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPS 652
+Y+ + L S I FL + + L+Y+H ++H DLKPS
Sbjct: 106 VQDLMETDLYKLLKTQHL-SNDHICYFLYQ------ILRGLKYIH---SANVLHRDLKPS 155
Query: 653 NVLLDNDMTAHMGDFGLTR 671
N+LL+ + DFGL R
Sbjct: 156 NLLLNTTCDLKICDFGLAR 174
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 60/136 (44%), Gaps = 26/136 (19%)
Query: 535 ATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNI-------RHRNLVKIITAC 587
+V+K + LD A+K + L + E ALR + +H ++V+ +A
Sbjct: 21 GSVFKCVKRLDGCIYAIK----RSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAW 76
Query: 588 STSDFQGNYFRALVYEFMHHGSLESC----PRILSFLRRL---NIAIDVASALEYLHHHC 640
+ D + E+ + GSL RI+S+ + ++ + V L Y+H
Sbjct: 77 AEDDHM-----LIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH--- 128
Query: 641 KKPIVHCDLKPSNVLL 656
+VH D+KPSN+ +
Sbjct: 129 SMSLVHMDIKPSNIFI 144
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 58/145 (40%), Gaps = 22/145 (15%)
Query: 562 LKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESC-------- 613
LK E ++ HR+L F+ N F +V E SL
Sbjct: 54 LKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALT 113
Query: 614 -PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRF 672
P +LR++ + +YLH + ++H DLK N+ L+ D+ +GDFGL
Sbjct: 114 EPEARYYLRQIVLGC------QYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLAT- 163
Query: 673 IPEVMSSNQCSSVGLKGTVGYATPE 697
+V + V L GT Y PE
Sbjct: 164 --KVEYDGERKKV-LCGTPNYIAPE 185
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 8/64 (12%)
Query: 613 CPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTA-----HMGDF 667
C R + L IAI + + +EY+H K +++ D+KP N L+ T H+ DF
Sbjct: 93 CDRTFTLKTVLMIAIQLITRMEYVH---TKSLIYRDVKPENFLVGRPGTKRQHAIHIIDF 149
Query: 668 GLTR 671
GL +
Sbjct: 150 GLAK 153
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 55/139 (39%), Gaps = 30/139 (21%)
Query: 592 FQGNYFRALVYEFMHHGSLESCPRILSFLRRLN---------IAIDVASALEYLHHHCKK 642
F+ N +V E++ G + S LRR+ A + EYLH
Sbjct: 110 FKDNSNLYMVMEYVAGGEM------FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL--- 160
Query: 643 PIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI----------PEVMSSNQCSSVGLKGTVG 692
+++ DLKP N+L+D + DFG + + PE ++ S G V
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPAIILSKGYNKAVD 220
Query: 693 YATPEYGILLLEIFTGKRP 711
+ G+L+ E+ G P
Sbjct: 221 WWA--LGVLIYEMAAGYPP 237
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 69/169 (40%), Gaps = 36/169 (21%)
Query: 563 KSFMAECQALRNIRHRNLVKIIT----ACSTSDFQGNYFRALVYEFMHHG--SLESCPRI 616
K E + L++++H N++ ++ A S +F Y LV M ++ C ++
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQKL 122
Query: 617 LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676
+ I + L+Y+H I+H DLKPSN+ ++ D + D GL R +
Sbjct: 123 TDDHVQFLI-YQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDE 178
Query: 677 MSSNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGK 709
M+ G T Y PE G ++ E+ TG+
Sbjct: 179 MT-------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 60/136 (44%), Gaps = 26/136 (19%)
Query: 535 ATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNI-------RHRNLVKIITAC 587
+V+K + LD A+K + L + E ALR + +H ++V+ +A
Sbjct: 25 GSVFKCVKRLDGCIYAIK----RSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAW 80
Query: 588 STSDFQGNYFRALVYEFMHHGSLESC----PRILSFLRRL---NIAIDVASALEYLHHHC 640
+ D + E+ + GSL RI+S+ + ++ + V L Y+H
Sbjct: 81 AEDDHM-----LIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH--- 132
Query: 641 KKPIVHCDLKPSNVLL 656
+VH D+KPSN+ +
Sbjct: 133 SMSLVHMDIKPSNIFI 148
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 55/139 (39%), Gaps = 30/139 (21%)
Query: 592 FQGNYFRALVYEFMHHGSLESCPRILSFLRRLN---------IAIDVASALEYLHHHCKK 642
F+ N +V E++ G + S LRR+ A + EYLH
Sbjct: 110 FKDNSNLYMVMEYVAGGEM------FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL--- 160
Query: 643 PIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI----------PEVMSSNQCSSVGLKGTVG 692
+++ DLKP N+++D + DFG + + PE ++ S G V
Sbjct: 161 DLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIISKGYNKAVD 220
Query: 693 YATPEYGILLLEIFTGKRP 711
+ G+L+ E+ G P
Sbjct: 221 WWA--LGVLIYEMAAGYPP 237
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 61/141 (43%), Gaps = 20/141 (14%)
Query: 563 KSFMAECQALRNIRHRNLVKIIT----ACSTSDFQGNYFRALVYEFMHHG--SLESCPRI 616
K E + L++++H N++ ++ A S +F Y LV M ++ C ++
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQKL 122
Query: 617 LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676
+ I + L+Y+H I+H DLKPSN+ ++ D + DF L R +
Sbjct: 123 TDDHVQFLI-YQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDE 178
Query: 677 MSSNQCSSVGLKGTVGYATPE 697
M+ G T Y PE
Sbjct: 179 MT-------GYVATRWYRAPE 192
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 21/139 (15%)
Query: 543 DLDQTFIAVKVL--FLHQRGALKSFMAECQALRNIRHRNLV---KIITACSTSDFQGNY- 596
++++ +A+K + F HQ ++ + E + L RH N++ II A + + Y
Sbjct: 47 NVNKVRVAIKKISPFEHQTYCQRT-LREIKILLAFRHENIIGINDIIRAPTIEQMKDVYI 105
Query: 597 ----FRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPS 652
+Y+ + L S I FL + + L+Y+H ++H DLKPS
Sbjct: 106 VQDLMETDLYKLLKTQHL-SNDHICYFLYQ------ILRGLKYIH---SANVLHRDLKPS 155
Query: 653 NVLLDNDMTAHMGDFGLTR 671
N+LL+ + DFGL R
Sbjct: 156 NLLLNTTSDLKICDFGLAR 174
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 60/136 (44%), Gaps = 26/136 (19%)
Query: 535 ATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNI-------RHRNLVKIITAC 587
+V+K + LD A+K + L + E ALR + +H ++V+ +A
Sbjct: 23 GSVFKCVKRLDGCIYAIK----RSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAW 78
Query: 588 STSDFQGNYFRALVYEFMHHGSLESC----PRILSFLRRL---NIAIDVASALEYLHHHC 640
+ D + E+ + GSL RI+S+ + ++ + V L Y+H
Sbjct: 79 AEDDHM-----LIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH--- 130
Query: 641 KKPIVHCDLKPSNVLL 656
+VH D+KPSN+ +
Sbjct: 131 SMSLVHMDIKPSNIFI 146
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 6/45 (13%)
Query: 629 VASALEYLHHHCKKPIVHCDLKPSNVLLDN---DMTAHMGDFGLT 670
V S + Y+H H IVH DLKP N+LL++ D + DFGL+
Sbjct: 130 VFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLS 171
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 6/45 (13%)
Query: 629 VASALEYLHHHCKKPIVHCDLKPSNVLLDN---DMTAHMGDFGLT 670
V S + Y+H H IVH DLKP N+LL++ D + DFGL+
Sbjct: 130 VFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLS 171
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 69/169 (40%), Gaps = 36/169 (21%)
Query: 563 KSFMAECQALRNIRHRNLVKIIT----ACSTSDFQGNYFRALVYEFMHHG--SLESCPRI 616
K E + L++++H N++ ++ A S +F Y LV M ++ C ++
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQKL 122
Query: 617 LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676
+ I + L+Y+H I+H DLKPSN+ ++ D + D GL R +
Sbjct: 123 TDDHVQFLI-YQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDE 178
Query: 677 MSSNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGK 709
M+ G T Y PE G ++ E+ TG+
Sbjct: 179 MT-------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 49/123 (39%), Gaps = 26/123 (21%)
Query: 610 LESCP--RILSFLRRLN---------IAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN 658
+E P + S LRR+ A + EYLH +++ DLKP N+++D
Sbjct: 121 MEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQ 177
Query: 659 DMTAHMGDFGLTRFI----------PEVMSSNQCSSVGLKGTVGYATPEYGILLLEIFTG 708
+ DFG + + PE ++ S G V + G+L+ E+ G
Sbjct: 178 QGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA--LGVLIYEMAAG 235
Query: 709 KRP 711
P
Sbjct: 236 YPP 238
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 49/123 (39%), Gaps = 26/123 (21%)
Query: 610 LESCP--RILSFLRRLN---------IAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN 658
+E P + S LRR+ A + EYLH +++ DLKP N+++D
Sbjct: 121 MEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQ 177
Query: 659 DMTAHMGDFGLTRFI----------PEVMSSNQCSSVGLKGTVGYATPEYGILLLEIFTG 708
+ DFG + + PE ++ S G V + G+L+ E+ G
Sbjct: 178 QGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA--LGVLIYEMAAG 235
Query: 709 KRP 711
P
Sbjct: 236 YPP 238
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 49/123 (39%), Gaps = 26/123 (21%)
Query: 610 LESCP--RILSFLRRLN---------IAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN 658
+E P + S LRR+ A + EYLH +++ DLKP N+++D
Sbjct: 120 MEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQ 176
Query: 659 DMTAHMGDFGLTRFI----------PEVMSSNQCSSVGLKGTVGYATPEYGILLLEIFTG 708
+ DFG + + PE ++ S G V + G+L+ E+ G
Sbjct: 177 QGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA--LGVLIYEMAAG 234
Query: 709 KRP 711
P
Sbjct: 235 YPP 237
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 49/123 (39%), Gaps = 26/123 (21%)
Query: 610 LESCP--RILSFLRRLN---------IAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN 658
+E P + S LRR+ A + EYLH +++ DLKP N+++D
Sbjct: 120 MEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQ 176
Query: 659 DMTAHMGDFGLTRFI----------PEVMSSNQCSSVGLKGTVGYATPEYGILLLEIFTG 708
+ DFG + + PE ++ S G V + G+L+ E+ G
Sbjct: 177 QGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA--LGVLIYEMAAG 234
Query: 709 KRP 711
P
Sbjct: 235 YPP 237
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 60/136 (44%), Gaps = 26/136 (19%)
Query: 535 ATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNI-------RHRNLVKIITAC 587
+V+K + LD A+K + L + E ALR + +H ++V+ +A
Sbjct: 23 GSVFKCVKRLDGCIYAIK----RSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAW 78
Query: 588 STSDFQGNYFRALVYEFMHHGSLESC----PRILSFLRRL---NIAIDVASALEYLHHHC 640
+ D + E+ + GSL RI+S+ + ++ + V L Y+H
Sbjct: 79 AEDDHM-----LIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH--- 130
Query: 641 KKPIVHCDLKPSNVLL 656
+VH D+KPSN+ +
Sbjct: 131 SMSLVHMDIKPSNIFI 146
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 49/123 (39%), Gaps = 26/123 (21%)
Query: 610 LESCP--RILSFLRRLN---------IAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN 658
+E P + S LRR+ A + EYLH +++ DLKP N+++D
Sbjct: 121 MEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQ 177
Query: 659 DMTAHMGDFGLTRFI----------PEVMSSNQCSSVGLKGTVGYATPEYGILLLEIFTG 708
+ DFG + + PE ++ S G V + G+L+ E+ G
Sbjct: 178 QGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA--LGVLIYEMAAG 235
Query: 709 KRP 711
P
Sbjct: 236 YPP 238
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 49/123 (39%), Gaps = 26/123 (21%)
Query: 610 LESCP--RILSFLRRLN---------IAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN 658
+E P + S LRR+ A + EYLH +++ DLKP N+++D
Sbjct: 121 MEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLMIDQ 177
Query: 659 DMTAHMGDFGLTRFI----------PEVMSSNQCSSVGLKGTVGYATPEYGILLLEIFTG 708
+ DFG + + PE ++ S G V + G+L+ E+ G
Sbjct: 178 QGYIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWA--LGVLIYEMAAG 235
Query: 709 KRP 711
P
Sbjct: 236 YPP 238
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 45/104 (43%), Gaps = 28/104 (26%)
Query: 626 AIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSV 685
A ++A L +L K I++ DLK NV+LD++ + DFG+ + N V
Sbjct: 127 AAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCK-------ENIWDGV 176
Query: 686 GLK---GTVGYATPE---------------YGILLLEIFTGKRP 711
K GT Y PE +G+LL E+ G+ P
Sbjct: 177 TTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAP 220
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 61/140 (43%), Gaps = 28/140 (20%)
Query: 568 ECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESCPRILSFLRRLNIAI 627
E + L+ + H ++KI D+ +V E M G L +++ +RL A
Sbjct: 71 EIEILKKLNHPCIIKIKNFFDAEDYY------IVLELMEGGEL--FDKVVGN-KRLKEAT 121
Query: 628 ------DVASALEYLHHHCKKPIVHCDLKPSNVLL---DNDMTAHMGDFGLTRFIPEV-M 677
+ A++YLH + I+H DLKP NVLL + D + DFG ++ + E +
Sbjct: 122 CKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL 178
Query: 678 SSNQCSSVGLKGTVGYATPE 697
C GT Y PE
Sbjct: 179 MRTLC------GTPTYLAPE 192
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 13/70 (18%)
Query: 632 ALEYLHHHCKKPIVHCDLKPSNVLL---DNDMTAHMGDFGLTRFIPEV-MSSNQCSSVGL 687
A++YLH + I+H DLKP NVLL + D + DFG ++ + E + C
Sbjct: 125 AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC----- 176
Query: 688 KGTVGYATPE 697
GT Y PE
Sbjct: 177 -GTPTYLAPE 185
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 13/70 (18%)
Query: 632 ALEYLHHHCKKPIVHCDLKPSNVLL---DNDMTAHMGDFGLTRFIPEV-MSSNQCSSVGL 687
A++YLH + I+H DLKP NVLL + D + DFG ++ + E + C
Sbjct: 126 AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC----- 177
Query: 688 KGTVGYATPE 697
GT Y PE
Sbjct: 178 -GTPTYLAPE 186
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 61/141 (43%), Gaps = 20/141 (14%)
Query: 563 KSFMAECQALRNIRHRNLVKIIT----ACSTSDFQGNYFRALVYEFMHHG--SLESCPRI 616
K E + L++++H N++ ++ A S +F Y LV M ++ C ++
Sbjct: 66 KRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY---LVTHLMGADLNNIVKCQKL 122
Query: 617 LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676
+ I + L+Y+H I+H DLKPSN+ ++ D + D GL R +
Sbjct: 123 TDDHVQFLI-YQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDE 178
Query: 677 MSSNQCSSVGLKGTVGYATPE 697
M+ G T Y PE
Sbjct: 179 MT-------GYVATRWYRAPE 192
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 13/70 (18%)
Query: 632 ALEYLHHHCKKPIVHCDLKPSNVLL---DNDMTAHMGDFGLTRFIPEV-MSSNQCSSVGL 687
A++YLH + I+H DLKP NVLL + D + DFG ++ + E + C
Sbjct: 126 AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC----- 177
Query: 688 KGTVGYATPE 697
GT Y PE
Sbjct: 178 -GTPTYLAPE 186
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 35.0 bits (79), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 13/70 (18%)
Query: 632 ALEYLHHHCKKPIVHCDLKPSNVLL---DNDMTAHMGDFGLTRFIPEV-MSSNQCSSVGL 687
A++YLH + I+H DLKP NVLL + D + DFG ++ + E + C
Sbjct: 126 AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLC----- 177
Query: 688 KGTVGYATPE 697
GT Y PE
Sbjct: 178 -GTPTYLAPE 186
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 61/141 (43%), Gaps = 28/141 (19%)
Query: 567 AECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESCPRILSFLRRLNIA 626
E + L+ + H ++KI D+ +V E M G L +++ +RL A
Sbjct: 203 TEIEILKKLNHPCIIKIKNFFDAEDYY------IVLELMEGGEL--FDKVVGN-KRLKEA 253
Query: 627 I------DVASALEYLHHHCKKPIVHCDLKPSNVLL---DNDMTAHMGDFGLTRFIPEV- 676
+ A++YLH + I+H DLKP NVLL + D + DFG ++ + E
Sbjct: 254 TCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS 310
Query: 677 MSSNQCSSVGLKGTVGYATPE 697
+ C GT Y PE
Sbjct: 311 LMRTLC------GTPTYLAPE 325
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 78/190 (41%), Gaps = 32/190 (16%)
Query: 549 IAVKVLFLHQRGALKSFMAEC--------QALR-NIRHRNLVKIITACSTSDFQGNYFR- 598
I + +F ++ A+K + EC Q LR + H N+++ C+ D Q Y
Sbjct: 40 IVYRGMFDNRDVAVKRILPECFSFADREVQLLRESDEHPNVIRYF--CTEKDRQFQYIAI 97
Query: 599 ----ALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNV 654
A + E++ L + + S L +LH IVH DLKP N+
Sbjct: 98 ELCAATLQEYVEQKDFAHLG-----LEPITLLQQTTSGLAHLH---SLNIVHRDLKPHNI 149
Query: 655 LLD-----NDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPEYGILLLEIFTGK 709
L+ + A + DFGL + + V + G+ GT G+ PE +L +
Sbjct: 150 LISMPNAHGKIKAMISDFGLCKKLA-VGRHSFSRRSGVPGTEGWIAPE--MLSEDCKENP 206
Query: 710 RPTSDMFTEG 719
T D+F+ G
Sbjct: 207 TYTVDIFSAG 216
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 55/139 (39%), Gaps = 30/139 (21%)
Query: 592 FQGNYFRALVYEFMHHGSLESCPRILSFLRRLN---------IAIDVASALEYLHHHCKK 642
F+ N +V E++ G + S LRR+ A + EYLH
Sbjct: 110 FKDNSNLYMVMEYVAGGEM------FSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL--- 160
Query: 643 PIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI----------PEVMSSNQCSSVGLKGTVG 692
+++ DLKP N+L+D + DFG + + PE ++ S G V
Sbjct: 161 DLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVD 220
Query: 693 YATPEYGILLLEIFTGKRP 711
+ G+L+ ++ G P
Sbjct: 221 WWA--LGVLIYQMAAGYPP 237
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 61/141 (43%), Gaps = 28/141 (19%)
Query: 567 AECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESCPRILSFLRRLNIA 626
E + L+ + H ++KI D+ +V E M G L +++ +RL A
Sbjct: 189 TEIEILKKLNHPCIIKIKNFFDAEDYY------IVLELMEGGELFD--KVVGN-KRLKEA 239
Query: 627 I------DVASALEYLHHHCKKPIVHCDLKPSNVLL---DNDMTAHMGDFGLTRFIPEV- 676
+ A++YLH + I+H DLKP NVLL + D + DFG ++ + E
Sbjct: 240 TCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS 296
Query: 677 MSSNQCSSVGLKGTVGYATPE 697
+ C GT Y PE
Sbjct: 297 LMRTLC------GTPTYLAPE 311
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 55/138 (39%), Gaps = 21/138 (15%)
Query: 592 FQGNYFRALVYEFMHHGSLESCPRILSFLRRLN--IAIDVASALEYLHHHCKKPIVHCDL 649
FQ + + +V E+M G L + + +V AL+ +H ++H D+
Sbjct: 144 FQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIH---SMGLIHRDV 200
Query: 650 KPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGL-----------KGTVGYATPE- 697
KP N+LLD + DFG + E + ++VG +G GY E
Sbjct: 201 KPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGREC 260
Query: 698 ----YGILLLEIFTGKRP 711
G+ L E+ G P
Sbjct: 261 DWWSVGVFLFEMLVGDTP 278
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 56/145 (38%), Gaps = 22/145 (15%)
Query: 562 LKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESC-------- 613
LK E ++ HR+L F+ N F +V E SL
Sbjct: 56 LKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALT 115
Query: 614 -PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRF 672
P +LR++ + +YLH + ++H DLK N+ L+ D+ +GDFGL
Sbjct: 116 EPEARYYLRQIVLGC------QYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATK 166
Query: 673 IPEVMSSNQCSSVGLKGTVGYATPE 697
+ + L GT Y PE
Sbjct: 167 V----EYDGERKKTLCGTPNYIAPE 187
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 8/64 (12%)
Query: 613 CPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLL-----DNDMTAHMGDF 667
C R S L IAI + S +EY+H K +++ D+KP N L+ H+ DF
Sbjct: 119 CDRTFSLKTVLMIAIQLISRMEYVH---SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDF 175
Query: 668 GLTR 671
L +
Sbjct: 176 ALAK 179
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 56/145 (38%), Gaps = 22/145 (15%)
Query: 562 LKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESC-------- 613
LK E ++ HR+L F+ N F +V E SL
Sbjct: 56 LKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALT 115
Query: 614 -PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRF 672
P +LR++ + +YLH + ++H DLK N+ L+ D+ +GDFGL
Sbjct: 116 EPEARYYLRQIVLGC------QYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATK 166
Query: 673 IPEVMSSNQCSSVGLKGTVGYATPE 697
+ + L GT Y PE
Sbjct: 167 V----EYDGERKKTLCGTPNYIAPE 187
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 34.7 bits (78), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 45/104 (43%), Gaps = 28/104 (26%)
Query: 626 AIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSV 685
A ++A L +L K I++ DLK NV+LD++ + DFG+ + N V
Sbjct: 448 AAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCK-------ENIWDGV 497
Query: 686 GLK---GTVGYATPE---------------YGILLLEIFTGKRP 711
K GT Y PE +G+LL E+ G+ P
Sbjct: 498 TTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAP 541
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 34.7 bits (78), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 54/139 (38%), Gaps = 23/139 (16%)
Query: 592 FQGNYFRALVYEFMHHGSL---ESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCD 648
FQ + + +V E+M G L S + R A +V AL+ +H +H D
Sbjct: 138 FQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTA-EVVLALDAIHSMG---FIHRD 193
Query: 649 LKPSNVLLDNDMTAHMGDFGLTRFI--------------PEVMSSNQCSSVGLKGTVGYA 694
+KP N+LLD + DFG + P+ +S S G G G
Sbjct: 194 VKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRE 253
Query: 695 TPEY--GILLLEIFTGKRP 711
+ G+ L E+ G P
Sbjct: 254 CDWWSVGVFLYEMLVGDTP 272
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 8/64 (12%)
Query: 613 CPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLL-----DNDMTAHMGDF 667
C R S L IAI + S +EY+H K +++ D+KP N L+ H+ DF
Sbjct: 98 CDRTFSLKTVLMIAIQLISRMEYVH---SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDF 154
Query: 668 GLTR 671
L +
Sbjct: 155 ALAK 158
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 54/139 (38%), Gaps = 23/139 (16%)
Query: 592 FQGNYFRALVYEFMHHGSL---ESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCD 648
FQ + + +V E+M G L S + R A +V AL+ +H +H D
Sbjct: 143 FQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTA-EVVLALDAIHSMG---FIHRD 198
Query: 649 LKPSNVLLDNDMTAHMGDFGLTRFI--------------PEVMSSNQCSSVGLKGTVGYA 694
+KP N+LLD + DFG + P+ +S S G G G
Sbjct: 199 VKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRE 258
Query: 695 TPEY--GILLLEIFTGKRP 711
+ G+ L E+ G P
Sbjct: 259 CDWWSVGVFLYEMLVGDTP 277
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 56/145 (38%), Gaps = 22/145 (15%)
Query: 562 LKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESC-------- 613
LK E ++ HR+L F+ N F +V E SL
Sbjct: 60 LKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALT 119
Query: 614 -PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRF 672
P +LR++ + +YLH + ++H DLK N+ L+ D+ +GDFGL
Sbjct: 120 EPEARYYLRQIVLGC------QYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATK 170
Query: 673 IPEVMSSNQCSSVGLKGTVGYATPE 697
+ + L GT Y PE
Sbjct: 171 V----EYDGERKKTLCGTPNYIAPE 191
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 10/103 (9%)
Query: 600 LVYEFMHHGSLES-C-PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD 657
L+ E+ G + S C P + + ++ + LE +++ + IVH DLKP N+LL
Sbjct: 106 LILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLS 165
Query: 658 NDM---TAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE 697
+ + DFG++R I + C + GT Y PE
Sbjct: 166 SIYPLGDIKIVDFGMSRKI-----GHACELREIMGTPEYLAPE 203
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 54/139 (38%), Gaps = 23/139 (16%)
Query: 592 FQGNYFRALVYEFMHHGSL---ESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCD 648
FQ + + +V E+M G L S + R A +V AL+ +H +H D
Sbjct: 143 FQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTA-EVVLALDAIHSMG---FIHRD 198
Query: 649 LKPSNVLLDNDMTAHMGDFGLTRFI--------------PEVMSSNQCSSVGLKGTVGYA 694
+KP N+LLD + DFG + P+ +S S G G G
Sbjct: 199 VKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRE 258
Query: 695 TPEY--GILLLEIFTGKRP 711
+ G+ L E+ G P
Sbjct: 259 CDWWSVGVFLYEMLVGDTP 277
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 49/106 (46%), Gaps = 17/106 (16%)
Query: 628 DVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGL 687
D AL +LH + +VH D+KP+N+ L +GDFGL + E+ ++
Sbjct: 165 DTLLALAHLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGL---LVELGTAG------- 211
Query: 688 KGTVGYATPEYGILLLEIFTGKRPT-SDMFTEGLD-LHNFVKMALP 731
G V P Y + E+ G T +D+F+ GL L M LP
Sbjct: 212 AGEVQEGDPRY--MAPELLQGSYGTAADVFSLGLTILEVACNMELP 255
>pdb|3G3A|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|C Chain C, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|E Chain E, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|G Chain G, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
Length = 178
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 51/125 (40%), Gaps = 2/125 (1%)
Query: 314 ISVGYLLKLQVLSLFENNISREIPSSLGNFTFLTELNLCGNSIRGSVPSALGSCHQL-WL 372
+ G QVL L++N I++ P T LT L+L N + QL L
Sbjct: 32 VPTGIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQL 91
Query: 373 DLSHNHLTGPIPLAVGNPKSIPHLDLSKNELSGEIPSSLAWIFGYISIFAKLNLSYNNLD 432
L+ N L A N KS+ H+ L N S + ++ +IS L Y NLD
Sbjct: 92 SLNDNQLKSIPRGAFDNLKSLTHIWLLNNPWDCAC-SDILYLSRWISQHPGLVFGYLNLD 150
Query: 433 GDVPR 437
D R
Sbjct: 151 PDSAR 155
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 71/158 (44%), Gaps = 23/158 (14%)
Query: 549 IAVKVL---FLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFM 605
+A+K++ +++ G ++ E + ++H +++++ F+ + + LV E
Sbjct: 39 VAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNY-----FEDSNYVYLVLEMC 93
Query: 606 HHGS----LESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMT 661
H+G L++ + S + + + + YLH H I+H DL SN+LL +M
Sbjct: 94 HNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMN 150
Query: 662 AHMGDFGLTR--FIPEVMSSNQCSSVGLKGTVGYATPE 697
+ DFGL +P C GT Y +PE
Sbjct: 151 IKIADFGLATQLKMPHEKHYTLC------GTPNYISPE 182
>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2
pdb|2V62|B Chain B, Structure Of Vaccinia-Related Kinase 2
Length = 345
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 60/126 (47%), Gaps = 9/126 (7%)
Query: 554 LFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESC 613
L +QR A K + + + + + + + ++F+G +R +V E + +
Sbjct: 84 LKFYQRVAKKDCIKKWIERKQLDYLG-IPLFYGSGLTEFKGRSYRFMVMERLGIDLQKIS 142
Query: 614 PRILSFLRR--LNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLL--DNDMTAHMGDFGL 669
+ +F + L + I + LEY+H + VH D+K +N+LL N ++ D+GL
Sbjct: 143 GQNGTFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKNPDQVYLADYGL 199
Query: 670 T-RFIP 674
+ R+ P
Sbjct: 200 SYRYCP 205
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 54/124 (43%), Gaps = 13/124 (10%)
Query: 549 IAVKVLFLHQRGALKS--FMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMH 606
I VKVL + KS F EC LR H N++ ++ AC + L+ +
Sbjct: 36 IVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAP---HPTLITHWXP 92
Query: 607 HGSL-----ESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIV-HCDLKPSNVLLDNDM 660
+GSL E ++ + + A+D A +L H +P++ L +V +D D
Sbjct: 93 YGSLYNVLHEGTNFVVDQSQAVKFALDXARGXAFL--HTLEPLIPRHALNSRSVXIDEDX 150
Query: 661 TAHM 664
TA +
Sbjct: 151 TARI 154
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 35/67 (52%), Gaps = 8/67 (11%)
Query: 632 ALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLT-RFIPEVMSSNQCSSVGLKGT 690
A+ +H H IVH DLKP+N L+ + M + DFG+ + P+ S + S V G
Sbjct: 167 AVHTIHQHG---IVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDTTSVVKDSQV---GA 219
Query: 691 VGYATPE 697
V Y PE
Sbjct: 220 VNYMPPE 226
>pdb|3G39|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor
Length = 170
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 51/125 (40%), Gaps = 2/125 (1%)
Query: 314 ISVGYLLKLQVLSLFENNISREIPSSLGNFTFLTELNLCGNSIRGSVPSALGSCHQL-WL 372
+ G QVL L++N I++ P T LT L+L N + QL L
Sbjct: 24 VPTGIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQL 83
Query: 373 DLSHNHLTGPIPLAVGNPKSIPHLDLSKNELSGEIPSSLAWIFGYISIFAKLNLSYNNLD 432
L+ N L A N KS+ H+ L N S + ++ +IS L Y NLD
Sbjct: 84 SLNDNQLKSIPRGAFDNLKSLTHIWLLNNPWDCAC-SDILYLSRWISQHPGLVFGYLNLD 142
Query: 433 GDVPR 437
D R
Sbjct: 143 PDSAR 147
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 34.3 bits (77), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 8/68 (11%)
Query: 631 SALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLT-RFIPEVMSSNQCSSVGLKG 689
A+ +H H IVH DLKP+N L+ + M + DFG+ + P+ + S V G
Sbjct: 138 EAVHTIHQHG---IVHSDLKPANFLIVDGMLK-LIDFGIANQMQPDXXXVVKDSQV---G 190
Query: 690 TVGYATPE 697
TV Y PE
Sbjct: 191 TVNYMPPE 198
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 34.3 bits (77), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 71/162 (43%), Gaps = 32/162 (19%)
Query: 548 FIAVKVLFLHQRGALKSFMA-ECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMH 606
FI + L +RG + + E LR IRH N++ + F+ L+ E +
Sbjct: 58 FIKKRRLXSSRRGVSREEIEREVNILREIRHPNIITLHDI-----FENKTDVVLILELVS 112
Query: 607 HGSLESCPRILSFL-RRLNIAIDVASA-----LEYLHHHCKKPIVHCDLKPSNV-LLDND 659
G L FL + ++ D A+ L+ +H+ K I H DLKP N+ LLD +
Sbjct: 113 GGEL------FDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKN 166
Query: 660 M---TAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPEY 698
+ + DFG+ ++ + N+ ++ + TPE+
Sbjct: 167 VPNPRIKLIDFGIAH---KIEAGNEFKNI-------FGTPEF 198
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 61/161 (37%), Gaps = 44/161 (27%)
Query: 592 FQGNYFRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKP 651
F+ N + ++ H S LSF +++ AL+ +H IVH D+KP
Sbjct: 89 FRKNDHVVIAMPYLEHESFLDILNSLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKP 145
Query: 652 SNVLLDNDMTAH-MGDFGLT-----------RFI-----PEVMSSNQCS--------SVG 686
SN L + + + + DFGL +F+ E S N+CS
Sbjct: 146 SNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAP 205
Query: 687 LKGTVGYATPEY----------------GILLLEIFTGKRP 711
GT G+ PE G++ L + +G+ P
Sbjct: 206 RAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYP 246
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 33.9 bits (76), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 56/122 (45%), Gaps = 22/122 (18%)
Query: 600 LVYEFMHHGS-LESCPRILSFLRRL--NIAIDVASALEYLHHHCKKPIVHCDLKPSNVLL 656
LV+E + GS L + F R + DVA+AL++LH K I H DLKP N+L
Sbjct: 88 LVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLH---TKGIAHRDLKPENILC 144
Query: 657 DNDMT---AHMGDFGLTRFIPEVMSSNQCSSVGLK------GTVGYATPEYGILLLEIFT 707
++ + DF L + +N C+ + G+ Y PE ++E+FT
Sbjct: 145 ESPEKVSPVKICDFDLGSGM---KLNNSCTPITTPELTTPCGSAEYMAPE----VVEVFT 197
Query: 708 GK 709
+
Sbjct: 198 DQ 199
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 33.9 bits (76), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 47/101 (46%), Gaps = 22/101 (21%)
Query: 623 LNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQC 682
+++ +A+ +EYL H +VH DL NVL+ + + + D GL R EV +++
Sbjct: 148 VHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFR---EVYAADYY 201
Query: 683 SSVGLK-GTVGYATPE---------------YGILLLEIFT 707
+G + + PE YG++L E+F+
Sbjct: 202 KLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 81/197 (41%), Gaps = 49/197 (24%)
Query: 549 IAVKVLFLHQRGAL----KSFMAECQALRNIRHR-NLVKIITACSTSDFQGNYFRALVYE 603
+AVK+L + GA ++ M+E + L +I H N+V ++ AC+ G +V E
Sbjct: 97 VAVKML---KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP---GGPLMVIV-E 149
Query: 604 FMHHGSLESCPR-------------------ILSFLRRLNIAIDVASALEYLHHHCKKPI 644
F G+L + R L+ + + VA +E+L +
Sbjct: 150 FCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKC 206
Query: 645 VHCDLKPSNVLLDNDMTAHMGDFGLTRFI---PEVMSSNQCSSVGLKG-----------T 690
+H DL N+LL + DFGL R I P+ + + + LK T
Sbjct: 207 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD-ARLPLKWMAPETIFDRVYT 265
Query: 691 VGYATPEYGILLLEIFT 707
+ +G+LL EIF+
Sbjct: 266 IQSDVWSFGVLLWEIFS 282
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 60/123 (48%), Gaps = 16/123 (13%)
Query: 546 QTFIAVKVLFLHQRGALKSFMAECQALRNIRHRN--------LVKIITACSTSDFQGNYF 597
+ F+A+KV+ + ++ + E + L+++R+ + +V+++ S G +
Sbjct: 62 KKFVAMKVVKSAEH-YTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHI 120
Query: 598 RALVYEFMHHGSLE----SCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSN 653
+V+E + H L+ S + L I V L+YLH C+ I+H D+KP N
Sbjct: 121 -CMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCR--IIHTDIKPEN 177
Query: 654 VLL 656
+LL
Sbjct: 178 ILL 180
>pdb|4FHO|A Chain A, Crystal Structure Of An Internalin C2 (Inlc2) From
Listeria Monocytogenes Str. 4b F2365 At 1.90 A
Resolution
pdb|4FHO|B Chain B, Crystal Structure Of An Internalin C2 (Inlc2) From
Listeria Monocytogenes Str. 4b F2365 At 1.90 A
Resolution
Length = 231
Score = 33.5 bits (75), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 316 VGYLLKLQVLSLFENNISREIPSSLGNFTFLTELNLCGNSIRGSVPSALGSCHQL-WLDL 374
+ YL L L L +N I+ P L N T +TEL L GN ++ SA+ + LDL
Sbjct: 65 IQYLNNLIGLELKDNQITDLTP--LKNLTKITELELSGNPLKNV--SAIAGLQSIKTLDL 120
Query: 375 SHNHLTGPIPLAVGNPKSIPHLDLSK 400
+ +T PLA + + +LDL++
Sbjct: 121 TSTQITDVTPLAGLSNLQVLYLDLNQ 146
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 33.5 bits (75), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 81/197 (41%), Gaps = 49/197 (24%)
Query: 549 IAVKVLFLHQRGAL----KSFMAECQALRNIRHR-NLVKIITACSTSDFQGNYFRALVYE 603
+AVK+L + GA ++ M+E + L +I H N+V ++ AC+ G +V E
Sbjct: 60 VAVKML---KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP---GGPLMVIV-E 112
Query: 604 FMHHGSLESCPR-------------------ILSFLRRLNIAIDVASALEYLHHHCKKPI 644
F G+L + R L+ + + VA +E+L +
Sbjct: 113 FCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKC 169
Query: 645 VHCDLKPSNVLLDNDMTAHMGDFGLTRFI---PEVMSSNQCSSVGLKG-----------T 690
+H DL N+LL + DFGL R I P+ + + + LK T
Sbjct: 170 IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD-ARLPLKWMAPETIFDRVYT 228
Query: 691 VGYATPEYGILLLEIFT 707
+ +G+LL EIF+
Sbjct: 229 IQSDVWSFGVLLWEIFS 245
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 33.5 bits (75), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 59/134 (44%), Gaps = 28/134 (20%)
Query: 623 LNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQC 682
+++ +A+ +EYL H +VH DL NVL+ + + + D GL R EV +++
Sbjct: 131 VHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFR---EVYAADYY 184
Query: 683 SSVGLK-GTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNF 725
+G + + PE YG++L E+F+ G +P G +
Sbjct: 185 KLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYC-----GYSNQDV 239
Query: 726 VKMALPDQILQVLD 739
V+M Q+L D
Sbjct: 240 VEMIRNRQVLPCPD 253
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 33.5 bits (75), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 71/161 (44%), Gaps = 27/161 (16%)
Query: 548 FIAVKVLFLHQRGALKSFMA-ECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMH 606
FI + L +RG + + E LR IRH N++ + F+ L+ E +
Sbjct: 44 FIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDI-----FENKTDVVLILELVS 98
Query: 607 HGSLESCPRILSFL-RRLNIAIDVASA-----LEYLHHHCKKPIVHCDLKPSNV-LLDND 659
G L FL + ++ D A+ L+ +H+ K I H DLKP N+ LLD +
Sbjct: 99 GGEL------FDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKN 152
Query: 660 M---TAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE 697
+ + DFG+ ++ + N+ ++ GT + PE
Sbjct: 153 VPNPRIKLIDFGIAH---KIEAGNEFKNIF--GTPEFVAPE 188
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 33.5 bits (75), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 81/197 (41%), Gaps = 49/197 (24%)
Query: 549 IAVKVLFLHQRGAL----KSFMAECQALRNIRHR-NLVKIITACSTSDFQGNYFRALVYE 603
+AVK+L + GA ++ M+E + L +I H N+V ++ AC+ G +V E
Sbjct: 60 VAVKML---KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP---GGPLMVIV-E 112
Query: 604 FMHHGSLESCPR-------------------ILSFLRRLNIAIDVASALEYLHHHCKKPI 644
F G+L + R L+ + + VA +E+L +
Sbjct: 113 FCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKC 169
Query: 645 VHCDLKPSNVLLDNDMTAHMGDFGLTRFI---PEVMSSNQCSSVGLKG-----------T 690
+H DL N+LL + DFGL R I P+ + + + LK T
Sbjct: 170 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGD-ARLPLKWMAPETIFDRVYT 228
Query: 691 VGYATPEYGILLLEIFT 707
+ +G+LL EIF+
Sbjct: 229 IQSDVWSFGVLLWEIFS 245
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 71/162 (43%), Gaps = 32/162 (19%)
Query: 548 FIAVKVLFLHQRGALKSFMA-ECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMH 606
FI + L +RG + + E LR IRH N++ + F+ L+ E +
Sbjct: 37 FIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDI-----FENKTDVVLILELVS 91
Query: 607 HGSLESCPRILSFL-RRLNIAIDVASA-----LEYLHHHCKKPIVHCDLKPSNV-LLDND 659
G L FL + ++ D A+ L+ +H+ K I H DLKP N+ LLD +
Sbjct: 92 GGEL------FDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKN 145
Query: 660 M---TAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPEY 698
+ + DFG+ ++ + N+ ++ + TPE+
Sbjct: 146 VPNPRIKLIDFGIAH---KIEAGNEFKNI-------FGTPEF 177
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 33.5 bits (75), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 81/197 (41%), Gaps = 49/197 (24%)
Query: 549 IAVKVLFLHQRGAL----KSFMAECQALRNIRHR-NLVKIITACSTSDFQGNYFRALVYE 603
+AVK+L + GA ++ M+E + L +I H N+V ++ AC+ G +V E
Sbjct: 60 VAVKML---KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP---GGPLMVIV-E 112
Query: 604 FMHHGSLESCPR-------------------ILSFLRRLNIAIDVASALEYLHHHCKKPI 644
F G+L + R L+ + + VA +E+L +
Sbjct: 113 FCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKC 169
Query: 645 VHCDLKPSNVLLDNDMTAHMGDFGLTRFI---PEVMSSNQCSSVGLKG-----------T 690
+H DL N+LL + DFGL R I P+ + + + LK T
Sbjct: 170 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD-ARLPLKWMAPETIFDRVYT 228
Query: 691 VGYATPEYGILLLEIFT 707
+ +G+LL EIF+
Sbjct: 229 IQSDVWSFGVLLWEIFS 245
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 33.5 bits (75), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 81/197 (41%), Gaps = 49/197 (24%)
Query: 549 IAVKVLFLHQRGAL----KSFMAECQALRNIRHR-NLVKIITACSTSDFQGNYFRALVYE 603
+AVK+L + GA ++ M+E + L +I H N+V ++ AC+ G +V E
Sbjct: 62 VAVKML---KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP---GGPLMVIV-E 114
Query: 604 FMHHGSLESCPR-------------------ILSFLRRLNIAIDVASALEYLHHHCKKPI 644
F G+L + R L+ + + VA +E+L +
Sbjct: 115 FCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKC 171
Query: 645 VHCDLKPSNVLLDNDMTAHMGDFGLTRFI---PEVMSSNQCSSVGLKG-----------T 690
+H DL N+LL + DFGL R I P+ + + + LK T
Sbjct: 172 IHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD-ARLPLKWMAPETIFDRVYT 230
Query: 691 VGYATPEYGILLLEIFT 707
+ +G+LL EIF+
Sbjct: 231 IQSDVWSFGVLLWEIFS 247
>pdb|1H6U|A Chain A, Internalin H: Crystal Structure Of Fused N-Terminal
Domains
Length = 308
Score = 33.5 bits (75), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 44/86 (51%), Gaps = 5/86 (5%)
Query: 316 VGYLLKLQVLSLFENNISREIPSSLGNFTFLTELNLCGNSIRGSVPSALGSCHQL-WLDL 374
V YL L L L +N I+ P L N T +TEL L GN ++ SA+ + LDL
Sbjct: 59 VQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV--SAIAGLQSIKTLDL 114
Query: 375 SHNHLTGPIPLAVGNPKSIPHLDLSK 400
+ +T PLA + + +LDL++
Sbjct: 115 TSTQITDVTPLAGLSNLQVLYLDLNQ 140
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 33.5 bits (75), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 81/197 (41%), Gaps = 49/197 (24%)
Query: 549 IAVKVLFLHQRGAL----KSFMAECQALRNIRHR-NLVKIITACSTSDFQGNYFRALVYE 603
+AVK+L + GA ++ M+E + L +I H N+V ++ AC+ G +V E
Sbjct: 51 VAVKML---KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP---GGPLMVIV-E 103
Query: 604 FMHHGSLESCPR-------------------ILSFLRRLNIAIDVASALEYLHHHCKKPI 644
F G+L + R L+ + + VA +E+L +
Sbjct: 104 FCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKC 160
Query: 645 VHCDLKPSNVLLDNDMTAHMGDFGLTRFI---PEVMSSNQCSSVGLKG-----------T 690
+H DL N+LL + DFGL R I P+ + + + LK T
Sbjct: 161 IHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD-ARLPLKWMAPETIFDRVYT 219
Query: 691 VGYATPEYGILLLEIFT 707
+ +G+LL EIF+
Sbjct: 220 IQSDVWSFGVLLWEIFS 236
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 33.5 bits (75), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 14/114 (12%)
Query: 619 FLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMS 678
++ + +AID L Y VH D+KP NVLLD + + DFG + +
Sbjct: 196 YIGEMVLAIDSIHQLHY---------VHRDIKPDNVLLDVNGHIRLADFGSCLKMND--D 244
Query: 679 SNQCSSVGLKGTVGYATPEYGILLLEIFTGKR-PTSDMFTEGLDLHNFVKMALP 731
SSV + GT Y +PE + +E GK P D ++ G+ ++ + P
Sbjct: 245 GTVQSSVAV-GTPDYISPEI-LQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 296
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 84/193 (43%), Gaps = 41/193 (21%)
Query: 549 IAVKVLFLHQRGAL----KSFMAECQALRNIRHR-NLVKIITACST--------SDFQ-- 593
+AVK+L + GA ++ M+E + L +I H N+V ++ AC+ ++F
Sbjct: 51 VAVKML---KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKF 107
Query: 594 GN---YFRALVYEFMHH--GSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCD 648
GN Y R+ EF+ + + L+ + + VA +E+L + +H D
Sbjct: 108 GNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRD 164
Query: 649 LKPSNVLLDNDMTAHMGDFGLTRFI---PEVMSSNQCSSVGLKG-----------TVGYA 694
L N+LL + DFGL R I P+ + + + LK T+
Sbjct: 165 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD-ARLPLKWMAPETIFDRVYTIQSD 223
Query: 695 TPEYGILLLEIFT 707
+G+LL EIF+
Sbjct: 224 VWSFGVLLWEIFS 236
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 60/123 (48%), Gaps = 16/123 (13%)
Query: 546 QTFIAVKVLFLHQRGALKSFMAECQALRNIRHRN--------LVKIITACSTSDFQGNYF 597
+ F+A+KV+ + ++ + E + L+++R+ + +V+++ S G +
Sbjct: 46 KKFVAMKVVKSAEH-YTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHI 104
Query: 598 RALVYEFMHHGSLE----SCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSN 653
+V+E + H L+ S + L I V L+YLH C+ I+H D+KP N
Sbjct: 105 -CMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCR--IIHTDIKPEN 161
Query: 654 VLL 656
+LL
Sbjct: 162 ILL 164
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 84/193 (43%), Gaps = 41/193 (21%)
Query: 549 IAVKVLFLHQRGAL----KSFMAECQALRNIRHR-NLVKIITACST--------SDFQ-- 593
+AVK+L + GA ++ M+E + L +I H N+V ++ AC+ ++F
Sbjct: 51 VAVKML---KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKF 107
Query: 594 GN---YFRALVYEFMHH--GSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCD 648
GN Y R+ EF+ + + L+ + + VA +E+L + +H D
Sbjct: 108 GNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRD 164
Query: 649 LKPSNVLLDNDMTAHMGDFGLTRFI---PEVMSSNQCSSVGLKG-----------TVGYA 694
L N+LL + DFGL R I P+ + + + LK T+
Sbjct: 165 LAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGD-ARLPLKWMAPETIFDRVYTIQSD 223
Query: 695 TPEYGILLLEIFT 707
+G+LL EIF+
Sbjct: 224 VWSFGVLLWEIFS 236
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 33.1 bits (74), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 14/114 (12%)
Query: 619 FLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMS 678
++ + +AID L Y VH D+KP NVLLD + + DFG + +
Sbjct: 180 YIGEMVLAIDSIHQLHY---------VHRDIKPDNVLLDVNGHIRLADFGSCLKMND--D 228
Query: 679 SNQCSSVGLKGTVGYATPEYGILLLEIFTGKR-PTSDMFTEGLDLHNFVKMALP 731
SSV + GT Y +PE + +E GK P D ++ G+ ++ + P
Sbjct: 229 GTVQSSVAV-GTPDYISPEI-LQAMEDGMGKYGPECDWWSLGVCMYEMLYGETP 280
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 33.1 bits (74), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 61/146 (41%), Gaps = 23/146 (15%)
Query: 535 ATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQG 594
VY+ L +A+K + Q A K+ E Q +R + H N+V++ +S +
Sbjct: 34 GVVYQAKLCDSGELVAIKKVL--QGKAFKN--RELQIMRKLDHCNIVRLRYFFYSSGEKK 89
Query: 595 N---------YFRALVYEFMHHGSL--ESCPRILSFLRRLNIAIDVASALEYLHHHCKKP 643
+ Y A VY H S ++ P I L + +L Y+H
Sbjct: 90 DEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLF----RSLAYIHSFG--- 142
Query: 644 IVHCDLKPSNVLLDNDMTA-HMGDFG 668
I H D+KP N+LLD D + DFG
Sbjct: 143 ICHRDIKPQNLLLDPDTAVLKLCDFG 168
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 33.1 bits (74), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 84/193 (43%), Gaps = 41/193 (21%)
Query: 549 IAVKVLFLHQRGAL----KSFMAECQALRNIRHR-NLVKIITACST--------SDFQ-- 593
+AVK+L + GA ++ M+E + L +I H N+V ++ AC+ ++F
Sbjct: 51 VAVKML---KEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKF 107
Query: 594 GN---YFRALVYEFMHH--GSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCD 648
GN Y R+ EF+ + + L+ + + VA +E+L + +H D
Sbjct: 108 GNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRD 164
Query: 649 LKPSNVLLDNDMTAHMGDFGLTRFI---PEVMSSNQCSSVGLKG-----------TVGYA 694
L N+LL + DFGL R I P+ + + + LK T+
Sbjct: 165 LAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGD-ARLPLKWMAPETIFDRVYTIQSD 223
Query: 695 TPEYGILLLEIFT 707
+G+LL EIF+
Sbjct: 224 VWSFGVLLWEIFS 236
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 33.1 bits (74), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 59/131 (45%), Gaps = 14/131 (10%)
Query: 613 CPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTA---HMGDFGL 669
C R LS L +A + + +E++H K +H D+KP N L+ A ++ DFGL
Sbjct: 96 CSRKLSLKTVLMLADQMINRVEFVH---SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGL 152
Query: 670 TRFIPEVMSSNQC---SSVGLKGTVGYATPEYGILLLEIFTGKRPTSDMFTEGLDLHNFV 726
+ + + + L GT YA+ L I +R D+ + G L F+
Sbjct: 153 AKKYRDTSTHQHIPYRENKNLTGTARYASVN---THLGIEQSRR--DDLESLGYVLMYFL 207
Query: 727 KMALPDQILQV 737
+ +LP Q L+
Sbjct: 208 RGSLPWQGLKA 218
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 33.1 bits (74), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 9/89 (10%)
Query: 613 CPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLL---DNDMTAHMGDFGL 669
C R S L +A + S +EY+H K +H D+KP N L+ ++ DFGL
Sbjct: 98 CSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGL 154
Query: 670 TRFIPEVMSSNQC---SSVGLKGTVGYAT 695
+ + + + L GT YA+
Sbjct: 155 AKKYRDARTHQHIPYRENKNLTGTARYAS 183
>pdb|3G3B|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|C Chain C, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|E Chain E, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|G Chain G, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
Length = 170
Score = 33.1 bits (74), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 51/125 (40%), Gaps = 2/125 (1%)
Query: 314 ISVGYLLKLQVLSLFENNISREIPSSLGNFTFLTELNLCGNSIRGSVPSALGSCHQL-WL 372
+ G QVL L++N I++ P T LT L+L N + QL L
Sbjct: 24 VPTGIPTTTQVLYLYDNRITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQL 83
Query: 373 DLSHNHLTGPIPLAVGNPKSIPHLDLSKNELSGEIPSSLAWIFGYISIFAKLNLSYNNLD 432
L+ N L A N +S+ H+ L N S + ++ +IS L Y NLD
Sbjct: 84 SLNDNQLKSIPRGAFDNLRSLTHIWLLNNPWDCAC-SDILYLSRWISQHPWLVFGYLNLD 142
Query: 433 GDVPR 437
D R
Sbjct: 143 HDSAR 147
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 32.7 bits (73), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 9/89 (10%)
Query: 613 CPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLL---DNDMTAHMGDFGL 669
C R S L +A + S +EY+H K +H D+KP N L+ ++ DFGL
Sbjct: 96 CSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGL 152
Query: 670 TRFIPEVMSSNQC---SSVGLKGTVGYAT 695
+ + + + L GT YA+
Sbjct: 153 AKKYRDARTHQHIPYRENKNLTGTARYAS 181
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 32.7 bits (73), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 9/89 (10%)
Query: 613 CPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLL---DNDMTAHMGDFGL 669
C R S L +A + S +EY+H K +H D+KP N L+ ++ DFGL
Sbjct: 98 CSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGL 154
Query: 670 TRFIPEVMSSNQC---SSVGLKGTVGYAT 695
+ + + + L GT YA+
Sbjct: 155 AKKYRDARTHQHIPYRENKNLTGTARYAS 183
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 32.7 bits (73), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 599 ALVYEFMHHGSLESC-PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD 657
+L++E++++ + P + + R I ++ AL+Y H + I+H D+KP NV++D
Sbjct: 104 SLIFEYVNNTDFKVLYPTLTDYDIRYYI-YELLKALDYCH---SQGIMHRDVKPHNVMID 159
Query: 658 NDMTA-HMGDFGLTRF 672
+++ + D+GL F
Sbjct: 160 HELRKLRLIDWGLAEF 175
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.7 bits (73), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 6/56 (10%)
Query: 644 IVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSV--GLKGTVGYATPE 697
I H D+KP N+LLD + DFGL V N + + GT+ Y PE
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLA----TVFRYNNRERLLNKMXGTLPYVAPE 176
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.7 bits (73), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 6/56 (10%)
Query: 644 IVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSV--GLKGTVGYATPE 697
I H D+KP N+LLD + DFGL V N + + GT+ Y PE
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLA----TVFRYNNRERLLNKMXGTLPYVAPE 176
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 32.7 bits (73), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 599 ALVYEFMHHGSLESC-PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD 657
+L++E++++ + P + + R I ++ AL+Y H + I+H D+KP NV++D
Sbjct: 104 SLIFEYVNNTDFKVLYPTLTDYDIRYYI-YELLKALDYCH---SQGIMHRDVKPHNVMID 159
Query: 658 NDMTA-HMGDFGLTRF 672
+++ + D+GL F
Sbjct: 160 HELRKLRLIDWGLAEF 175
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 32.7 bits (73), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 599 ALVYEFMHHGSLESC-PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD 657
+L++E++++ + P + + R I ++ AL+Y H + I+H D+KP NV++D
Sbjct: 104 SLIFEYVNNTDFKVLYPTLTDYDIRYYI-YELLKALDYCH---SQGIMHRDVKPHNVMID 159
Query: 658 NDMTA-HMGDFGLTRF 672
+++ + D+GL F
Sbjct: 160 HELRKLRLIDWGLAEF 175
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 32.7 bits (73), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 59/123 (47%), Gaps = 16/123 (13%)
Query: 546 QTFIAVKVLFLHQRGALKSFMAECQALRNIRHRN--------LVKIITACSTSDFQGNYF 597
+ F+A+KV+ Q ++ + E + L+ +R + +V++I S G +
Sbjct: 56 KRFVAMKVVKSAQH-YTETALDEIKLLKCVRESDPSDPNKDMVVQLIDDFKISGMNGIHV 114
Query: 598 RALVYEFMHHGSLE----SCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSN 653
+V+E + H L+ S + L +I V L+YLH CK I+H D+KP N
Sbjct: 115 -CMVFEVLGHHLLKWIIKSNYQGLPVRCVKSIIRQVLQGLDYLHSKCK--IIHTDIKPEN 171
Query: 654 VLL 656
+L+
Sbjct: 172 ILM 174
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 32.7 bits (73), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 599 ALVYEFMHHGSLESC-PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD 657
+L++E++++ + P + + R I ++ AL+Y H + I+H D+KP NV++D
Sbjct: 105 SLIFEYVNNTDFKVLYPTLTDYDIRYYI-YELLKALDYCH---SQGIMHRDVKPHNVMID 160
Query: 658 NDMTA-HMGDFGLTRF 672
+++ + D+GL F
Sbjct: 161 HELRKLRLIDWGLAEF 176
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 32.7 bits (73), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 6/56 (10%)
Query: 644 IVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSV--GLKGTVGYATPE 697
I H D+KP N+LLD + DFGL V N + + GT+ Y PE
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLA----TVFRYNNRERLLNKMXGTLPYVAPE 177
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 32.7 bits (73), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 8/107 (7%)
Query: 599 ALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN 658
ALV+E +++ + + L+ ++ AL+Y H I+H D+KP NVL+D+
Sbjct: 110 ALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVLIDH 166
Query: 659 DMTA-HMGDFGLTRFIPEVMSSN-QCSSVGLKGT---VGYATPEYGI 700
+ + D+GL F N + +S KG V Y +Y +
Sbjct: 167 EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSL 213
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 32.7 bits (73), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 599 ALVYEFMHHGSLESC-PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD 657
+L++E++++ + P + + R I ++ AL+Y H + I+H D+KP NV++D
Sbjct: 105 SLIFEYVNNTDFKVLYPTLTDYDIRYYI-YELLKALDYCH---SQGIMHRDVKPHNVMID 160
Query: 658 NDMTA-HMGDFGLTRF 672
+++ + D+GL F
Sbjct: 161 HELRKLRLIDWGLAEF 176
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 32.7 bits (73), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 599 ALVYEFMHHGSLESC-PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD 657
+L++E++++ + P + + R I ++ AL+Y H + I+H D+KP NV++D
Sbjct: 104 SLIFEYVNNTDFKVLYPTLTDYDIRYYI-YELLKALDYCH---SQGIMHRDVKPHNVMID 159
Query: 658 NDMTA-HMGDFGLTRF 672
+++ + D+GL F
Sbjct: 160 HELRKLRLIDWGLAEF 175
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 32.7 bits (73), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 599 ALVYEFMHHGSLESC-PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD 657
+L++E++++ + P + + R I ++ AL+Y H + I+H D+KP NV++D
Sbjct: 125 SLIFEYVNNTDFKVLYPTLTDYDIRYYI-YELLKALDYCH---SQGIMHRDVKPHNVMID 180
Query: 658 NDMTA-HMGDFGLTRF 672
+++ + D+GL F
Sbjct: 181 HELRKLRLIDWGLAEF 196
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 32.7 bits (73), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 599 ALVYEFMHHGSLESC-PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD 657
+L++E++++ + P + + R I ++ AL+Y H + I+H D+KP NV++D
Sbjct: 104 SLIFEYVNNTDFKVLYPTLTDYDIRYYI-YELLKALDYCH---SQGIMHRDVKPHNVMID 159
Query: 658 NDMTA-HMGDFGLTRF 672
+++ + D+GL F
Sbjct: 160 HELRKLRLIDWGLAEF 175
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 32.7 bits (73), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 599 ALVYEFMHHGSLESC-PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD 657
+L++E++++ + P + + R I ++ AL+Y H + I+H D+KP NV++D
Sbjct: 106 SLIFEYVNNTDFKVLYPTLTDYDIRYYI-YELLKALDYCH---SQGIMHRDVKPHNVMID 161
Query: 658 NDMTA-HMGDFGLTRF 672
+++ + D+GL F
Sbjct: 162 HELRKLRLIDWGLAEF 177
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 32.7 bits (73), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 48/107 (44%), Gaps = 15/107 (14%)
Query: 572 LRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSL-ESCPRILSFLRRLNIAI--D 628
LR +H N IIT D G Y +V E M G L + R F R A+
Sbjct: 70 LRYGQHPN---IITLKDVYD-DGKYV-YVVTELMKGGELLDKILRQKFFSEREASAVLFT 124
Query: 629 VASALEYLHHHCKKPIVHCDLKPSNVLL----DNDMTAHMGDFGLTR 671
+ +EYLH + +VH DLKPSN+L N + + DFG +
Sbjct: 125 ITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAK 168
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 32.7 bits (73), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 599 ALVYEFMHHGSLESC-PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD 657
+L++E++++ + P + + R I ++ AL+Y H + I+H D+KP NV++D
Sbjct: 104 SLIFEYVNNTDFKVLYPTLTDYDIRYYI-YELLKALDYCH---SQGIMHRDVKPHNVMID 159
Query: 658 NDMTA-HMGDFGLTRF 672
+++ + D+GL F
Sbjct: 160 HELRKLRLIDWGLAEF 175
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 32.7 bits (73), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 47/106 (44%), Gaps = 22/106 (20%)
Query: 629 VASALEYLHHHCKKPIVHCDLKPSNVLL--------DNDMTAH-----MGDFGLTRFIPE 675
+AS + +LH I+H DLKP N+L+ D A + DFGL + +
Sbjct: 142 IASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS 198
Query: 676 VMSSNQCSSVGLKGTVGYATPEYGILLLEIFTGKRPTS--DMFTEG 719
+ + GT G+ PE LLE T +R T D+F+ G
Sbjct: 199 GQXXFRXNLNNPSGTSGWRAPE----LLEESTKRRLTRSIDIFSMG 240
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 32.3 bits (72), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 47/106 (44%), Gaps = 22/106 (20%)
Query: 629 VASALEYLHHHCKKPIVHCDLKPSNVLL--------DNDMTAH-----MGDFGLTRFIPE 675
+AS + +LH I+H DLKP N+L+ D A + DFGL + +
Sbjct: 142 IASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS 198
Query: 676 VMSSNQCSSVGLKGTVGYATPEYGILLLEIFTGKRPTS--DMFTEG 719
+ + GT G+ PE LLE T +R T D+F+ G
Sbjct: 199 GQXXFRXNLNNPSGTSGWRAPE----LLEESTKRRLTRSIDIFSMG 240
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.3 bits (72), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 6/56 (10%)
Query: 644 IVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSV--GLKGTVGYATPE 697
I H D+KP N+LLD + DFGL V N + + GT+ Y PE
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLA----TVFRYNNRERLLNKMXGTLPYVAPE 176
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 32.3 bits (72), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 18/99 (18%)
Query: 623 LNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI---PEVMSS 679
++ + VA +E+L + +H DL N+LL + + DFGL R I P+ +
Sbjct: 202 ISYSFQVARGMEFLSS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRK 258
Query: 680 NQCSSVGLKGTVG-------YATP----EYGILLLEIFT 707
+ + LK Y+T YG+LL EIF+
Sbjct: 259 GD-TRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 32.3 bits (72), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 8/107 (7%)
Query: 599 ALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN 658
ALV+E +++ + + L+ ++ AL+Y H I+H D+KP NV++D+
Sbjct: 110 ALVFEHVNNTDFKQLRQTLTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDH 166
Query: 659 DMTA-HMGDFGLTRFIPEVMSSN-QCSSVGLKGT---VGYATPEYGI 700
+ + D+GL F N + +S KG V Y +Y +
Sbjct: 167 EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSL 213
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 6/56 (10%)
Query: 644 IVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSV--GLKGTVGYATPE 697
I H D+KP N+LLD + DFGL V N + + GT+ Y PE
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLA----TVFRYNNRERLLNKMXGTLPYVAPE 176
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 52/108 (48%), Gaps = 22/108 (20%)
Query: 575 IRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESCPRILS-----FLRRLNIAI-- 627
++H ++V+++ S+ G + +V+EFM L C I+ F+ +A
Sbjct: 83 LKHPHIVELLETYSSD---GMLY--MVFEFMDGADL--CFEIVKRADAGFVYSEAVASHY 135
Query: 628 --DVASALEYLHHHCKKPIVHCDLKPSNVLL---DNDMTAHMGDFGLT 670
+ AL Y H + I+H D+KP NVLL +N +GDFG+
Sbjct: 136 MRQILEALRYCHDN---NIIHRDVKPENVLLASKENSAPVKLGDFGVA 180
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 8/107 (7%)
Query: 599 ALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN 658
ALV+E +++ + + L+ ++ AL+Y H I+H D+KP NV++D+
Sbjct: 110 ALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDH 166
Query: 659 DMTA-HMGDFGLTRFIPEVMSSN-QCSSVGLKGT---VGYATPEYGI 700
+ + D+GL F N + +S KG V Y +Y +
Sbjct: 167 EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSL 213
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 8/107 (7%)
Query: 599 ALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN 658
ALV+E +++ + + L+ ++ AL+Y H I+H D+KP NV++D+
Sbjct: 109 ALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDH 165
Query: 659 DMTA-HMGDFGLTRFIPEVMSSN-QCSSVGLKGT---VGYATPEYGI 700
+ + D+GL F N + +S KG V Y +Y +
Sbjct: 166 EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSL 212
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 8/107 (7%)
Query: 599 ALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN 658
ALV+E +++ + + L+ ++ AL+Y H I+H D+KP NV++D+
Sbjct: 109 ALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDH 165
Query: 659 DMTA-HMGDFGLTRFIPEVMSSN-QCSSVGLKGT---VGYATPEYGI 700
+ + D+GL F N + +S KG V Y +Y +
Sbjct: 166 EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSL 212
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 8/107 (7%)
Query: 599 ALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN 658
ALV+E +++ + + L+ ++ AL+Y H I+H D+KP NV++D+
Sbjct: 108 ALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDH 164
Query: 659 DMTA-HMGDFGLTRFIPEVMSSN-QCSSVGLKGT---VGYATPEYGI 700
+ + D+GL F N + +S KG V Y +Y +
Sbjct: 165 EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSL 211
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 8/107 (7%)
Query: 599 ALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN 658
ALV+E +++ + + L+ ++ AL+Y H I+H D+KP NV++D+
Sbjct: 110 ALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDH 166
Query: 659 DMTA-HMGDFGLTRFIPEVMSSN-QCSSVGLKGT---VGYATPEYGI 700
+ + D+GL F N + +S KG V Y +Y +
Sbjct: 167 EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSL 213
>pdb|2Z62|A Chain A, Crystal Structure Of The Tv3 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
pdb|2Z65|A Chain A, Crystal Structure Of The Human Tlr4 Tv3
Hybrid-Md-2-Eritoran Complex
pdb|2Z65|B Chain B, Crystal Structure Of The Human Tlr4 Tv3
Hybrid-Md-2-Eritoran Complex
Length = 276
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 77/194 (39%), Gaps = 10/194 (5%)
Query: 272 SHLRYLYMSANPISGSIPTEIGNLKNLXXXXXXXX--XXXRNIPISVGYLLKLQVLSLFE 329
SHL L ++ NPI L +L N PI G+L L+ L++
Sbjct: 76 SHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPI--GHLKTLKELNVAH 133
Query: 330 NNI-SREIPSSLGNFTFLTELNLCGNSIRGSVPSALGSCHQLWLDLSHNHLTGPIPLAVG 388
N I S ++P N T L L+L N I+ + L HQ+ L L+ P+
Sbjct: 134 NLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSL-NPMNFI 192
Query: 389 NPKSIPHLDLSKNEL-SGEIPSSLAWIFGYISIFAKLNLSYNNLDGDVPRKMIFK---NA 444
P + + L + L + ++ S IF ++ K+ L N D PR N
Sbjct: 193 QPGAFKEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWLNK 252
Query: 445 SAISEAGNEKLCGG 458
++ E G+ K G
Sbjct: 253 NSQKEQGSAKCSGS 266
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 50/110 (45%), Gaps = 26/110 (23%)
Query: 629 VASALEYLHHHCKKPIVHCDLKPSNVLL--------DNDMTAH-----MGDFGLTRFIPE 675
+AS + +LH I+H DLKP N+L+ D A + DFGL + +
Sbjct: 124 IASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS 180
Query: 676 VMSSNQCSSVGLKGTVGYATPEYGILLLE----IFTGKRPTS--DMFTEG 719
SS + + GT G+ PE LLE + T +R T D+F+ G
Sbjct: 181 GQSSFRTNLNNPSGTSGWRAPE----LLEESNNLQTKRRLTRSIDIFSMG 226
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 8/107 (7%)
Query: 599 ALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN 658
ALV+E +++ + + L+ ++ AL+Y H I+H D+KP NV++D+
Sbjct: 110 ALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDH 166
Query: 659 DMTA-HMGDFGLTRFIPEVMSSN-QCSSVGLKGT---VGYATPEYGI 700
+ + D+GL F N + +S KG V Y +Y +
Sbjct: 167 EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSL 213
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 8/107 (7%)
Query: 599 ALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN 658
ALV+E +++ + + L+ ++ AL+Y H I+H D+KP NV++D+
Sbjct: 110 ALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDH 166
Query: 659 DMTA-HMGDFGLTRFIPEVMSSN-QCSSVGLKGT---VGYATPEYGI 700
+ + D+GL F N + +S KG V Y +Y +
Sbjct: 167 EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSL 213
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 8/107 (7%)
Query: 599 ALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN 658
ALV+E +++ + + L+ ++ AL+Y H I+H D+KP NV++D+
Sbjct: 110 ALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDH 166
Query: 659 DMTA-HMGDFGLTRFIPEVMSSN-QCSSVGLKGT---VGYATPEYGI 700
+ + D+GL F N + +S KG V Y +Y +
Sbjct: 167 EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSL 213
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 8/107 (7%)
Query: 599 ALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN 658
ALV+E +++ + + L+ ++ AL+Y H I+H D+KP NV++D+
Sbjct: 110 ALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDH 166
Query: 659 DMTA-HMGDFGLTRFIPEVMSSN-QCSSVGLKGT---VGYATPEYGI 700
+ + D+GL F N + +S KG V Y +Y +
Sbjct: 167 EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSL 213
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 32.0 bits (71), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 8/107 (7%)
Query: 599 ALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN 658
ALV+E +++ + + L+ ++ AL+Y H I+H D+KP NV++D+
Sbjct: 110 ALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDH 166
Query: 659 DMTA-HMGDFGLTRFIPEVMSSN-QCSSVGLKGT---VGYATPEYGI 700
+ + D+GL F N + +S KG V Y +Y +
Sbjct: 167 EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSL 213
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 8/107 (7%)
Query: 599 ALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN 658
ALV+E +++ + + L+ ++ AL+Y H I+H D+KP NV++D+
Sbjct: 110 ALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDH 166
Query: 659 DMTA-HMGDFGLTRFIPEVMSSN-QCSSVGLKGT---VGYATPEYGI 700
+ + D+GL F N + +S KG V Y +Y +
Sbjct: 167 EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSL 213
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 8/107 (7%)
Query: 599 ALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN 658
ALV+E +++ + + L+ ++ AL+Y H I+H D+KP NV++D+
Sbjct: 115 ALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDH 171
Query: 659 DMTA-HMGDFGLTRFIPEVMSSN-QCSSVGLKGT---VGYATPEYGI 700
+ + D+GL F N + +S KG V Y +Y +
Sbjct: 172 EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSL 218
>pdb|3UL9|A Chain A, Structure Of The Tv3 Mutant M41e
Length = 278
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 77/194 (39%), Gaps = 10/194 (5%)
Query: 272 SHLRYLYMSANPISGSIPTEIGNLKNLXXXXXXXX--XXXRNIPISVGYLLKLQVLSLFE 329
SHL L ++ NPI L +L N PI G+L L+ L++
Sbjct: 77 SHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPI--GHLKTLKELNVAH 134
Query: 330 NNI-SREIPSSLGNFTFLTELNLCGNSIRGSVPSALGSCHQLWLDLSHNHLTGPIPLAVG 388
N I S ++P N T L L+L N I+ + L HQ+ L L+ P+
Sbjct: 135 NLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSL-NPMNFI 193
Query: 389 NPKSIPHLDLSKNEL-SGEIPSSLAWIFGYISIFAKLNLSYNNLDGDVPRKMIFK---NA 444
P + + L + L + ++ S IF ++ K+ L N D PR N
Sbjct: 194 QPGAFKEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWLNK 253
Query: 445 SAISEAGNEKLCGG 458
++ E G+ K G
Sbjct: 254 NSQKEQGSAKCSGS 267
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 10/58 (17%)
Query: 644 IVHCDLKPSNVLLDNDMTAHMGDFGLTRFI----PEVMSSNQCSSVGLKGTVGYATPE 697
I H D+KP N+LLD + DFGL E + + C GT+ Y PE
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC------GTLPYVAPE 176
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 8/107 (7%)
Query: 599 ALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN 658
ALV+E +++ + + L+ ++ AL+Y H I+H D+KP NV++D+
Sbjct: 110 ALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDH 166
Query: 659 DMTA-HMGDFGLTRFIPEVMSSN-QCSSVGLKGT---VGYATPEYGI 700
+ + D+GL F N + +S KG V Y +Y +
Sbjct: 167 EHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSL 213
>pdb|3ULA|A Chain A, Crystal Structure Of The Tv3 Mutant F63w-Md-2-Eritoran
Complex
pdb|3ULA|C Chain C, Crystal Structure Of The Tv3 Mutant F63w-Md-2-Eritoran
Complex
Length = 279
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 77/194 (39%), Gaps = 10/194 (5%)
Query: 272 SHLRYLYMSANPISGSIPTEIGNLKNLXXXXXXXX--XXXRNIPISVGYLLKLQVLSLFE 329
SHL L ++ NPI L +L N PI G+L L+ L++
Sbjct: 78 SHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPI--GHLKTLKELNVAH 135
Query: 330 NNI-SREIPSSLGNFTFLTELNLCGNSIRGSVPSALGSCHQLWLDLSHNHLTGPIPLAVG 388
N I S ++P N T L L+L N I+ + L HQ+ L+ + P+
Sbjct: 136 NLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQM-PLLNLSLDLSLNPMNFI 194
Query: 389 NPKSIPHLDLSKNEL-SGEIPSSLAWIFGYISIFAKLNLSYNNLDGDVPRKMIFK---NA 444
P + + L + L + ++ S IF ++ K+ L N D PR N
Sbjct: 195 QPGAFKEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWLNK 254
Query: 445 SAISEAGNEKLCGG 458
++ E G+ K G
Sbjct: 255 NSQKEQGSAKCSGS 268
>pdb|3UL8|A Chain A, Crystal Structure Of The Tv3 Mutant V134l
Length = 279
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 77/194 (39%), Gaps = 10/194 (5%)
Query: 272 SHLRYLYMSANPISGSIPTEIGNLKNLXXXXXXXX--XXXRNIPISVGYLLKLQVLSLFE 329
SHL L ++ NPI L +L N PI G+L L+ L++
Sbjct: 78 SHLSTLILTGNPIQSLALGAFSGLSSLQKLVALETNLASLENFPI--GHLKTLKELNVAH 135
Query: 330 NNI-SREIPSSLGNFTFLTELNLCGNSIRGSVPSALGSCHQLWLDLSHNHLTGPIPLAVG 388
N I S ++P N T L L+L N I+ + L HQ+ L L+ P+
Sbjct: 136 NLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSL-NPMNFI 194
Query: 389 NPKSIPHLDLSKNEL-SGEIPSSLAWIFGYISIFAKLNLSYNNLDGDVPRKMIFK---NA 444
P + + L + L + ++ S IF ++ K+ L N D PR N
Sbjct: 195 QPGAFKEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWLNK 254
Query: 445 SAISEAGNEKLCGG 458
++ E G+ K G
Sbjct: 255 NSQKEQGSAKCSGS 268
>pdb|3UL7|A Chain A, Crystal Structure Of The Tv3 Mutant F63w
Length = 278
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 77/194 (39%), Gaps = 10/194 (5%)
Query: 272 SHLRYLYMSANPISGSIPTEIGNLKNLXXXXXXXX--XXXRNIPISVGYLLKLQVLSLFE 329
SHL L ++ NPI L +L N PI G+L L+ L++
Sbjct: 77 SHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPI--GHLKTLKELNVAH 134
Query: 330 NNI-SREIPSSLGNFTFLTELNLCGNSIRGSVPSALGSCHQLWLDLSHNHLTGPIPLAVG 388
N I S ++P N T L L+L N I+ + L HQ+ L+ + P+
Sbjct: 135 NLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQM-PLLNLSLDLSLNPMNFI 193
Query: 389 NPKSIPHLDLSKNEL-SGEIPSSLAWIFGYISIFAKLNLSYNNLDGDVPRKMIFK---NA 444
P + + L + L + ++ S IF ++ K+ L N D PR N
Sbjct: 194 QPGAFKEIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLSRWLNK 253
Query: 445 SAISEAGNEKLCGG 458
++ E G+ K G
Sbjct: 254 NSQKEQGSAKCSGS 267
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 10/58 (17%)
Query: 644 IVHCDLKPSNVLLDNDMTAHMGDFGLTRFI----PEVMSSNQCSSVGLKGTVGYATPE 697
I H D+KP N+LLD + DFGL E + + C GT+ Y PE
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC------GTLPYVAPE 176
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 10/58 (17%)
Query: 644 IVHCDLKPSNVLLDNDMTAHMGDFGLTRFI----PEVMSSNQCSSVGLKGTVGYATPE 697
I H D+KP N+LLD + DFGL E + + C GT+ Y PE
Sbjct: 124 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC------GTLPYVAPE 175
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 10/58 (17%)
Query: 644 IVHCDLKPSNVLLDNDMTAHMGDFGLTRFI----PEVMSSNQCSSVGLKGTVGYATPE 697
I H D+KP N+LLD + DFGL E + + C GT+ Y PE
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC------GTLPYVAPE 176
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 10/58 (17%)
Query: 644 IVHCDLKPSNVLLDNDMTAHMGDFGLTRFI----PEVMSSNQCSSVGLKGTVGYATPE 697
I H D+KP N+LLD + DFGL E + + C GT+ Y PE
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC------GTLPYVAPE 176
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 10/58 (17%)
Query: 644 IVHCDLKPSNVLLDNDMTAHMGDFGLTRFI----PEVMSSNQCSSVGLKGTVGYATPE 697
I H D+KP N+LLD + DFGL E + + C GT+ Y PE
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC------GTLPYVAPE 177
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 10/58 (17%)
Query: 644 IVHCDLKPSNVLLDNDMTAHMGDFGLTRFI----PEVMSSNQCSSVGLKGTVGYATPE 697
I H D+KP N+LLD + DFGL E + + C GT+ Y PE
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC------GTLPYVAPE 176
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 10/58 (17%)
Query: 644 IVHCDLKPSNVLLDNDMTAHMGDFGLTRFI----PEVMSSNQCSSVGLKGTVGYATPE 697
I H D+KP N+LLD + DFGL E + + C GT+ Y PE
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC------GTLPYVAPE 177
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 10/58 (17%)
Query: 644 IVHCDLKPSNVLLDNDMTAHMGDFGLTRFI----PEVMSSNQCSSVGLKGTVGYATPE 697
I H D+KP N+LLD + DFGL E + + C GT+ Y PE
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC------GTLPYVAPE 176
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 10/58 (17%)
Query: 644 IVHCDLKPSNVLLDNDMTAHMGDFGLTRFI----PEVMSSNQCSSVGLKGTVGYATPE 697
I H D+KP N+LLD + DFGL E + + C GT+ Y PE
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC------GTLPYVAPE 176
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 10/58 (17%)
Query: 644 IVHCDLKPSNVLLDNDMTAHMGDFGLTRFI----PEVMSSNQCSSVGLKGTVGYATPE 697
I H D+KP N+LLD + DFGL E + + C GT+ Y PE
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC------GTLPYVAPE 177
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 10/58 (17%)
Query: 644 IVHCDLKPSNVLLDNDMTAHMGDFGLTRFI----PEVMSSNQCSSVGLKGTVGYATPE 697
I H D+KP N+LLD + DFGL E + + C GT+ Y PE
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC------GTLPYVAPE 177
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 10/58 (17%)
Query: 644 IVHCDLKPSNVLLDNDMTAHMGDFGLTRFI----PEVMSSNQCSSVGLKGTVGYATPE 697
I H D+KP N+LLD + DFGL E + + C GT+ Y PE
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC------GTLPYVAPE 177
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 10/58 (17%)
Query: 644 IVHCDLKPSNVLLDNDMTAHMGDFGLTRFI----PEVMSSNQCSSVGLKGTVGYATPE 697
I H D+KP N+LLD + DFGL E + + C GT+ Y PE
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC------GTLPYVAPE 177
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 10/58 (17%)
Query: 644 IVHCDLKPSNVLLDNDMTAHMGDFGLTRFI----PEVMSSNQCSSVGLKGTVGYATPE 697
I H D+KP N+LLD + DFGL E + + C GT+ Y PE
Sbjct: 126 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC------GTLPYVAPE 177
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 10/58 (17%)
Query: 644 IVHCDLKPSNVLLDNDMTAHMGDFGLTRFI----PEVMSSNQCSSVGLKGTVGYATPE 697
I H D+KP N+LLD + DFGL E + + C GT+ Y PE
Sbjct: 125 ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC------GTLPYVAPE 176
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Query: 625 IAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLT 670
I ++ L +LH H ++H D+K NVLL + + DFG++
Sbjct: 134 ICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVS 176
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 31.2 bits (69), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 10/64 (15%)
Query: 594 GNYFRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSN 653
G AL+ ++ H G + + I+ + L+Y+H C I+H D+KP N
Sbjct: 113 GENLLALIKKYEHRG--------IPLIYVKQISKQLLLGLDYMHRRCG--IIHTDIKPEN 162
Query: 654 VLLD 657
VL++
Sbjct: 163 VLME 166
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 10/64 (15%)
Query: 594 GNYFRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSN 653
G AL+ ++ H G + + I+ + L+Y+H C I+H D+KP N
Sbjct: 113 GENLLALIKKYEHRG--------IPLIYVKQISKQLLLGLDYMHRRCG--IIHTDIKPEN 162
Query: 654 VLLD 657
VL++
Sbjct: 163 VLME 166
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
Query: 624 NIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMG--DFG 668
A + L+ LH K I+HCDLKP N+LL + + DFG
Sbjct: 204 KFAHSILQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFG 247
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 632 ALEYLHHHCKKPIVHCDLKPSNVLLDNDMT-AHMGDFGLTRFI-PEVMSSNQCSSVGLKG 689
LEYLH + I+H D+K NVLL +D + A + DFG + P+ + + + + G
Sbjct: 178 GLEYLH---SRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPG 234
Query: 690 TVGYATPE 697
T + PE
Sbjct: 235 TETHMAPE 242
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
Query: 624 NIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMG--DFG 668
A + L+ LH K I+HCDLKP N+LL + + DFG
Sbjct: 204 KFAHSILQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFG 247
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
Query: 624 NIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMG--DFG 668
A + L+ LH K I+HCDLKP N+LL + + DFG
Sbjct: 204 KFAHSILQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFG 247
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 8/100 (8%)
Query: 603 EFMHHGSLESCPRILSFL---RRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDND 659
E + GSL + + L R L LEYLH + I+H D+K NVLL +D
Sbjct: 144 ELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLH---TRRILHGDVKADNVLLSSD 200
Query: 660 MT-AHMGDFGLTRFI-PEVMSSNQCSSVGLKGTVGYATPE 697
+ A + DFG + P+ + + + + GT + PE
Sbjct: 201 GSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPE 240
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 31.2 bits (69), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 5/54 (9%)
Query: 645 VHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVG-LKGTVGYATPE 697
H D+KP N+L+ D A++ DFG I + + + +G GT+ Y PE
Sbjct: 156 THRDVKPENILVSADDFAYLVDFG----IASATTDEKLTQLGNTVGTLYYXAPE 205
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 20/33 (60%), Gaps = 3/33 (9%)
Query: 626 AIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN 658
I++ AL YL K + H DLKP N+LLD+
Sbjct: 143 CIEILKALNYLR---KMSLTHTDLKPENILLDD 172
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 632 ALEYLHHHCKKPIVHCDLKPSNVLLDNDMT-AHMGDFGLTRFI-PEVMSSNQCSSVGLKG 689
LEYLH + I+H D+K NVLL +D + A + DFG + P+ + + + + G
Sbjct: 162 GLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPG 218
Query: 690 TVGYATPE 697
T + PE
Sbjct: 219 TETHMAPE 226
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 7/47 (14%)
Query: 629 VASALEYLHHHCKKPIVHCDLKPSNVLL----DNDMTAHMGDFGLTR 671
+ +EYLH + +VH DLKPSN+L N + + DFG +
Sbjct: 125 ITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAK 168
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 632 ALEYLHHHCKKPIVHCDLKPSNVLLDNDMT-AHMGDFGLTRFI-PEVMSSNQCSSVGLKG 689
LEYLH + I+H D+K NVLL +D + A + DFG + P+ + + + + G
Sbjct: 178 GLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPG 234
Query: 690 TVGYATPE 697
T + PE
Sbjct: 235 TETHMAPE 242
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 10/76 (13%)
Query: 644 IVHCDLKPSNVLLDNDMTAHMG--DFG----LTRFIPEVMSSNQCSS----VGLKGTVGY 693
I+HCDLKP N+LL N + + DFG L + I + + S S +G+ +
Sbjct: 161 IIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAI 220
Query: 694 ATPEYGILLLEIFTGK 709
G +L+E+ TG+
Sbjct: 221 DMWSLGCILVEMHTGE 236
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 10/76 (13%)
Query: 644 IVHCDLKPSNVLLDNDMTAHMG--DFG----LTRFIPEVMSSNQCSS----VGLKGTVGY 693
I+HCDLKP N+LL N + + DFG L + I + + S S +G+ +
Sbjct: 180 IIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAI 239
Query: 694 ATPEYGILLLEIFTGK 709
G +L+E+ TG+
Sbjct: 240 DMWSLGCILVEMHTGE 255
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 30.8 bits (68), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 632 ALEYLHHHCKKPIVHCDLKPSNVLLDNDMT-AHMGDFGLTRFI-PEVMSSNQCSSVGLKG 689
LEYLH + I+H D+K NVLL +D + A + DFG + P+ + + + + G
Sbjct: 197 GLEYLH---SRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPG 253
Query: 690 TVGYATPE 697
T + PE
Sbjct: 254 TETHMAPE 261
>pdb|3ZYN|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
pdb|3ZYN|B Chain B, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
Length = 321
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 78/183 (42%), Gaps = 34/183 (18%)
Query: 262 TLPNSLANFSSHLRYLYMSANPISGSIPT------------EIGNLKNLXXXXXXXXXXX 309
T+P + S LR L++ NPI SIP+ ++G LK L
Sbjct: 97 TVPTQAFEYLSKLRELWLRNNPIE-SIPSYAFNRVPSLRRLDLGELKRLEYISEA----- 150
Query: 310 RNIPISVGYLLKLQVLSLFENNISREIPSSLGNFTFLTELNLCGNS---IRGSVPSALGS 366
+ L+ L+ L+L N+ ++IP +L L EL L GN IR L S
Sbjct: 151 -----AFEGLVNLRYLNLGMCNL-KDIP-NLTALVRLEELELSGNRLDLIRPGSFQGLTS 203
Query: 367 CHQLWLDLSHNHLTGPIPLAVGNPKSIPHLDLSKNELSGEIPSSLAWIFGYISIFAKLNL 426
+LW L H + A + KS+ L+LS N L +P L F + +++L
Sbjct: 204 LRKLW--LMHAQVATIERNAFDDLKSLEELNLSHNNLMS-LPHDL---FTPLHRLERVHL 257
Query: 427 SYN 429
++N
Sbjct: 258 NHN 260
>pdb|4G8A|A Chain A, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
pdb|4G8A|B Chain B, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
Length = 635
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 43/102 (42%), Gaps = 5/102 (4%)
Query: 272 SHLRYLYMSANPISGSIPTEIGNLKNLXXXXXXXX--XXXRNIPISVGYLLKLQVLSLFE 329
SHL L ++ NPI L +L N PI G+L L+ L++
Sbjct: 100 SHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPI--GHLKTLKELNVAH 157
Query: 330 NNI-SREIPSSLGNFTFLTELNLCGNSIRGSVPSALGSCHQL 370
N I S ++P N T L L+L N I+ + L HQ+
Sbjct: 158 NLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQM 199
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 10/76 (13%)
Query: 644 IVHCDLKPSNVLLDN--DMTAHMGDFG----LTRFIPEVMSSNQCSS----VGLKGTVGY 693
I+HCDLKP N+LL N + DFG L + I + + S S +G+ +
Sbjct: 180 IIHCDLKPENILLCNPKRXAIKIVDFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAI 239
Query: 694 ATPEYGILLLEIFTGK 709
G +L+E+ TG+
Sbjct: 240 DMWSLGCILVEMHTGE 255
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 30.4 bits (67), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 71/152 (46%), Gaps = 25/152 (16%)
Query: 625 IAIDVASALEYLHHHCKKPIVHCDLKPSNVLL---DNDMTAHMGDFGLTRFIPEVMSSNQ 681
I + SA+ ++H +VH DLKP N+L ++++ + DFG R P NQ
Sbjct: 111 IMRKLVSAVSHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKP---PDNQ 164
Query: 682 CSSVGLKG---TVGYATPEYGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALP----DQI 734
LK T+ YA PE LL + G + D+++ G+ L+ + +P D+
Sbjct: 165 ----PLKTPCFTLHYAAPE---LLNQ--NGYDESCDLWSLGVILYTMLSGQVPFQSHDRS 215
Query: 735 LQVLDPLFLVGGVQEGEETAEENIKKGQIRES 766
L + ++ +++G+ + E K +E+
Sbjct: 216 LTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEA 247
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.137 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,748,646
Number of Sequences: 62578
Number of extensions: 805120
Number of successful extensions: 3427
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 590
Number of HSP's successfully gapped in prelim test: 463
Number of HSP's that attempted gapping in prelim test: 2274
Number of HSP's gapped (non-prelim): 1183
length of query: 771
length of database: 14,973,337
effective HSP length: 106
effective length of query: 665
effective length of database: 8,340,069
effective search space: 5546145885
effective search space used: 5546145885
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)