Query 041479
Match_columns 771
No_of_seqs 664 out of 4836
Neff 9.2
Searched_HMMs 46136
Date Fri Mar 29 07:33:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041479.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/041479hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 2E-92 4.3E-97 866.8 56.1 738 2-770 29-951 (968)
2 PLN00113 leucine-rich repeat r 100.0 2.2E-42 4.7E-47 424.5 27.0 380 44-431 188-606 (968)
3 KOG0581 Mitogen-activated prot 100.0 5.5E-42 1.2E-46 345.0 15.2 232 522-765 80-334 (364)
4 KOG1187 Serine/threonine prote 100.0 3E-41 6.5E-46 361.0 20.3 239 523-770 77-352 (361)
5 KOG0192 Tyrosine kinase specif 100.0 1.7E-40 3.6E-45 352.3 18.9 230 528-770 48-303 (362)
6 KOG0615 Serine/threonine prote 100.0 3.6E-41 7.9E-46 340.6 11.2 231 522-765 173-436 (475)
7 KOG4194 Membrane glycoprotein 100.0 7.3E-41 1.6E-45 349.9 6.6 370 45-439 79-459 (873)
8 KOG0595 Serine/threonine-prote 100.0 2.1E-39 4.5E-44 328.7 17.0 181 522-715 11-217 (429)
9 KOG4194 Membrane glycoprotein 100.0 8.2E-41 1.8E-45 349.5 6.0 388 45-457 53-454 (873)
10 KOG0197 Tyrosine kinases [Sign 100.0 7.2E-38 1.6E-42 330.0 16.1 231 525-770 210-461 (468)
11 KOG0575 Polo-like serine/threo 100.0 3.5E-37 7.5E-42 327.7 16.8 228 523-765 20-268 (592)
12 KOG0591 NIMA (never in mitosis 100.0 5.5E-38 1.2E-42 302.2 5.0 234 525-768 23-283 (375)
13 KOG0593 Predicted protein kina 100.0 3.5E-37 7.6E-42 299.6 9.6 179 524-714 5-204 (396)
14 KOG0582 Ste20-like serine/thre 100.0 2.6E-36 5.6E-41 308.4 15.1 236 521-765 26-292 (516)
15 KOG1026 Nerve growth factor re 100.0 1.9E-36 4.2E-41 334.3 15.1 234 525-770 490-762 (774)
16 KOG0198 MEKK and related serin 100.0 1E-36 2.2E-41 313.3 11.8 237 523-766 19-276 (313)
17 KOG0598 Ribosomal protein S6 k 100.0 3.6E-36 7.9E-41 303.0 13.8 225 520-758 24-269 (357)
18 KOG0578 p21-activated serine/t 100.0 4.2E-36 9.2E-41 316.9 13.5 231 522-765 274-522 (550)
19 KOG4721 Serine/threonine prote 100.0 1.1E-36 2.4E-41 317.3 7.1 230 516-768 119-366 (904)
20 KOG0600 Cdc2-related protein k 100.0 3.2E-35 7E-40 304.8 15.3 182 523-714 119-322 (560)
21 KOG0592 3-phosphoinositide-dep 100.0 2.1E-35 4.6E-40 308.6 14.0 234 521-765 73-337 (604)
22 KOG0583 Serine/threonine prote 100.0 1.8E-34 3.9E-39 309.4 18.3 229 521-764 17-273 (370)
23 KOG0444 Cytoskeletal regulator 100.0 2.9E-37 6.2E-42 324.4 -4.0 361 44-436 7-379 (1255)
24 KOG0661 MAPK related serine/th 100.0 1.2E-35 2.6E-40 305.8 7.6 227 527-766 16-291 (538)
25 KOG0659 Cdk activating kinase 100.0 1.4E-34 3E-39 277.2 13.9 229 525-766 6-281 (318)
26 KOG0616 cAMP-dependent protein 100.0 1.1E-34 2.5E-39 281.8 13.4 222 518-757 41-283 (355)
27 KOG0585 Ca2+/calmodulin-depend 100.0 2.1E-34 4.6E-39 296.0 15.9 236 523-765 99-371 (576)
28 cd05102 PTKc_VEGFR3 Catalytic 100.0 4.1E-34 8.8E-39 309.2 17.3 237 525-771 11-335 (338)
29 KOG0193 Serine/threonine prote 100.0 7.1E-35 1.5E-39 308.2 10.8 235 522-771 393-654 (678)
30 KOG0597 Serine-threonine prote 100.0 9.4E-35 2E-39 303.4 10.7 221 527-765 8-250 (808)
31 KOG0472 Leucine-rich repeat pr 100.0 2.8E-37 6.2E-42 310.3 -8.4 226 44-284 68-309 (565)
32 KOG0194 Protein tyrosine kinas 100.0 2E-34 4.4E-39 309.2 12.1 234 523-770 159-420 (474)
33 KOG2345 Serine/threonine prote 100.0 4.3E-35 9.4E-40 277.9 6.1 245 526-771 26-301 (302)
34 PHA02988 hypothetical protein; 100.0 1.1E-33 2.5E-38 297.4 17.5 231 527-770 26-279 (283)
35 KOG0588 Serine/threonine prote 100.0 5.4E-34 1.2E-38 303.9 13.6 230 520-765 11-262 (786)
36 KOG0663 Protein kinase PITSLRE 100.0 1.1E-33 2.4E-38 278.9 13.2 183 521-714 76-280 (419)
37 KOG0201 Serine/threonine prote 100.0 5.9E-35 1.3E-39 298.6 4.2 225 527-765 19-262 (467)
38 KOG1095 Protein tyrosine kinas 100.0 1.7E-33 3.7E-38 322.2 14.6 233 526-770 697-961 (1025)
39 cd05104 PTKc_Kit Catalytic dom 100.0 5.5E-33 1.2E-37 303.9 17.9 237 524-771 38-375 (375)
40 KOG0444 Cytoskeletal regulator 100.0 1.4E-35 3E-40 311.7 -2.7 340 44-409 32-380 (1255)
41 cd05106 PTKc_CSF-1R Catalytic 100.0 5.4E-33 1.2E-37 303.7 17.2 238 523-771 40-373 (374)
42 KOG0196 Tyrosine kinase, EPH ( 100.0 8.5E-34 1.9E-38 306.5 10.1 234 527-771 635-892 (996)
43 KOG1094 Discoidin domain recep 100.0 6.4E-33 1.4E-37 290.6 15.8 231 527-770 544-804 (807)
44 KOG0472 Leucine-rich repeat pr 100.0 1.5E-36 3.2E-41 305.2 -11.1 391 45-455 46-541 (565)
45 cd05585 STKc_YPK1_like Catalyt 100.0 1.1E-32 2.3E-37 294.4 17.7 219 529-764 1-245 (312)
46 cd05571 STKc_PKB Catalytic dom 100.0 1.2E-32 2.7E-37 295.4 17.7 223 528-765 2-250 (323)
47 cd05064 PTKc_EphR_A10 Catalyti 100.0 2.4E-32 5.2E-37 284.9 19.0 233 526-771 10-266 (266)
48 KOG0584 Serine/threonine prote 100.0 1.2E-33 2.6E-38 301.2 8.3 229 526-765 45-295 (632)
49 cd05631 STKc_GRK4 Catalytic do 100.0 4.6E-32 9.9E-37 285.8 18.9 225 527-765 6-260 (285)
50 PTZ00267 NIMA-related protein 100.0 4.4E-32 9.5E-37 305.8 19.6 231 523-765 69-322 (478)
51 KOG0611 Predicted serine/threo 100.0 5.6E-33 1.2E-37 279.1 10.5 226 523-765 55-302 (668)
52 KOG0580 Serine/threonine prote 100.0 3.8E-33 8.3E-38 263.6 8.8 229 520-765 21-272 (281)
53 KOG1989 ARK protein kinase fam 100.0 1.3E-32 2.9E-37 305.6 14.5 239 526-770 42-311 (738)
54 KOG0605 NDR and related serine 100.0 2.6E-32 5.6E-37 286.0 15.7 229 521-759 141-435 (550)
55 PLN00034 mitogen-activated pro 100.0 5.8E-32 1.3E-36 294.0 19.2 229 523-766 76-328 (353)
56 KOG0574 STE20-like serine/thre 100.0 2.7E-34 5.8E-39 278.3 0.6 228 524-766 36-283 (502)
57 KOG3653 Transforming growth fa 100.0 8.5E-32 1.8E-36 277.2 18.6 236 527-770 216-503 (534)
58 cd05595 STKc_PKB_beta Catalyti 100.0 5.3E-32 1.2E-36 290.4 18.0 223 528-765 2-250 (323)
59 PTZ00263 protein kinase A cata 100.0 5.8E-32 1.2E-36 290.9 18.3 228 520-765 17-270 (329)
60 cd05108 PTKc_EGFR Catalytic do 100.0 6.3E-32 1.4E-36 289.2 18.4 236 522-770 8-268 (316)
61 KOG0033 Ca2+/calmodulin-depend 100.0 5.1E-34 1.1E-38 269.4 1.9 226 526-765 16-266 (355)
62 KOG0694 Serine/threonine prote 100.0 3.6E-32 7.9E-37 292.6 16.1 223 522-760 369-613 (694)
63 cd05593 STKc_PKB_gamma Catalyt 100.0 6.7E-32 1.5E-36 290.1 18.3 223 528-765 2-250 (328)
64 cd05052 PTKc_Abl Catalytic dom 100.0 9.6E-32 2.1E-36 279.8 18.9 234 524-771 9-263 (263)
65 KOG0599 Phosphorylase kinase g 100.0 4.4E-33 9.5E-38 266.9 7.8 229 523-765 19-282 (411)
66 PF07714 Pkinase_Tyr: Protein 100.0 4.8E-32 1E-36 281.3 16.1 229 527-767 5-259 (259)
67 cd05105 PTKc_PDGFR_alpha Catal 100.0 8.6E-32 1.9E-36 295.4 18.6 236 525-771 41-398 (400)
68 cd06649 PKc_MEK2 Catalytic dom 100.0 1E-31 2.2E-36 289.3 18.6 177 525-714 9-204 (331)
69 KOG0579 Ste20-like serine/thre 100.0 2E-33 4.3E-38 295.7 4.3 233 520-765 31-288 (1187)
70 cd05048 PTKc_Ror Catalytic Dom 100.0 1.6E-31 3.5E-36 281.3 18.6 236 523-770 7-283 (283)
71 KOG0658 Glycogen synthase kina 100.0 1.8E-32 4E-37 275.6 10.7 225 527-765 30-305 (364)
72 cd05115 PTKc_Zap-70 Catalytic 100.0 2.6E-31 5.6E-36 275.6 19.8 231 528-770 2-255 (257)
73 KOG4278 Protein tyrosine kinas 100.0 1.2E-32 2.7E-37 289.3 9.8 237 520-770 266-523 (1157)
74 PTZ00426 cAMP-dependent protei 100.0 1.6E-31 3.4E-36 288.2 18.7 227 521-765 30-283 (340)
75 cd05084 PTKc_Fes Catalytic dom 100.0 1.8E-31 3.8E-36 275.9 18.3 230 528-769 2-252 (252)
76 cd05612 STKc_PRKX_like Catalyt 100.0 8.1E-32 1.8E-36 284.7 15.9 222 526-765 6-253 (291)
77 cd05594 STKc_PKB_alpha Catalyt 100.0 1E-31 2.3E-36 288.5 16.6 224 528-765 2-251 (325)
78 cd05096 PTKc_DDR1 Catalytic do 100.0 2.1E-31 4.5E-36 283.6 18.5 233 525-769 9-304 (304)
79 KOG0660 Mitogen-activated prot 100.0 5.2E-32 1.1E-36 271.8 12.9 234 526-765 27-309 (359)
80 cd05035 PTKc_Axl_like Catalyti 100.0 3.5E-31 7.7E-36 277.0 19.6 238 527-771 5-273 (273)
81 cd05116 PTKc_Syk Catalytic dom 100.0 2.9E-31 6.4E-36 275.2 18.7 230 528-769 2-254 (257)
82 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 1.2E-31 2.7E-36 289.1 16.5 225 526-766 6-257 (333)
83 cd05075 PTKc_Axl Catalytic dom 100.0 3.2E-31 7E-36 277.3 19.1 238 527-771 5-272 (272)
84 cd05114 PTKc_Tec_Rlk Catalytic 100.0 2.9E-31 6.2E-36 275.1 18.2 227 526-767 9-255 (256)
85 cd08228 STKc_Nek6 Catalytic do 100.0 3E-31 6.5E-36 276.7 18.3 233 526-770 7-265 (267)
86 KOG4257 Focal adhesion tyrosin 100.0 3.8E-32 8.3E-37 286.3 11.4 232 526-771 394-650 (974)
87 cd05107 PTKc_PDGFR_beta Cataly 100.0 3E-31 6.6E-36 290.9 18.9 239 522-771 38-400 (401)
88 cd05588 STKc_aPKC Catalytic do 100.0 3.1E-31 6.7E-36 285.2 18.6 225 528-764 2-260 (329)
89 cd05093 PTKc_TrkB Catalytic do 100.0 3.8E-31 8.2E-36 279.3 18.9 234 525-770 9-279 (288)
90 cd05033 PTKc_EphR Catalytic do 100.0 4.4E-31 9.6E-36 275.3 19.1 235 525-771 8-266 (266)
91 cd05608 STKc_GRK1 Catalytic do 100.0 3.4E-31 7.4E-36 278.4 18.4 224 529-765 1-256 (280)
92 cd05590 STKc_nPKC_eta Catalyti 100.0 2.3E-31 5E-36 285.0 17.4 218 528-760 2-241 (320)
93 cd05618 STKc_aPKC_iota Catalyt 100.0 3E-31 6.5E-36 285.2 18.2 221 528-760 2-250 (329)
94 KOG0610 Putative serine/threon 100.0 2.2E-31 4.8E-36 270.3 16.0 232 524-764 80-390 (459)
95 cd05592 STKc_nPKC_theta_delta 100.0 3.2E-31 7E-36 283.4 18.3 222 528-764 2-246 (316)
96 cd05054 PTKc_VEGFR Catalytic d 100.0 2.5E-31 5.4E-36 286.6 17.5 237 525-771 11-334 (337)
97 cd06650 PKc_MEK1 Catalytic dom 100.0 3.5E-31 7.5E-36 285.2 18.5 177 525-714 9-204 (333)
98 cd07859 STKc_TDY_MAPK_plant Ca 100.0 3E-31 6.4E-36 286.9 18.0 235 526-765 5-289 (338)
99 KOG2052 Activin A type IB rece 100.0 1.9E-31 4.1E-36 272.6 15.3 239 526-770 216-503 (513)
100 cd05058 PTKc_Met_Ron Catalytic 100.0 5E-31 1.1E-35 274.2 18.9 233 529-770 3-259 (262)
101 cd05626 STKc_LATS2 Catalytic d 100.0 2.4E-31 5.1E-36 292.1 17.3 231 526-765 6-304 (381)
102 cd05094 PTKc_TrkC Catalytic do 100.0 5.1E-31 1.1E-35 278.7 18.6 236 523-770 7-282 (291)
103 cd07871 STKc_PCTAIRE3 Catalyti 100.0 2.7E-31 5.9E-36 280.3 16.3 227 525-765 9-284 (288)
104 KOG0594 Protein kinase PCTAIRE 100.0 2E-31 4.3E-36 269.0 14.5 232 526-766 16-302 (323)
105 cd05607 STKc_GRK7 Catalytic do 100.0 5.1E-31 1.1E-35 276.6 18.3 224 529-766 1-250 (277)
106 cd05584 STKc_p70S6K Catalytic 100.0 4.4E-31 9.6E-36 283.4 18.2 223 528-765 3-255 (323)
107 cd05591 STKc_nPKC_epsilon Cata 100.0 4.1E-31 8.8E-36 283.5 17.8 223 528-765 2-253 (321)
108 PRK13184 pknD serine/threonine 100.0 4.2E-31 9.2E-36 305.2 19.0 238 525-770 6-290 (932)
109 cd05619 STKc_nPKC_theta Cataly 100.0 4.7E-31 1E-35 282.1 18.0 222 528-764 2-246 (316)
110 KOG4279 Serine/threonine prote 100.0 1.4E-32 2.9E-37 292.4 6.0 228 524-765 578-831 (1226)
111 KOG0577 Serine/threonine prote 100.0 1.8E-32 3.9E-37 287.0 6.7 222 526-765 31-277 (948)
112 cd07848 STKc_CDKL5 Catalytic d 100.0 2.7E-31 5.7E-36 280.3 15.7 228 526-765 6-283 (287)
113 cd05072 PTKc_Lyn Catalytic dom 100.0 6.3E-31 1.4E-35 273.3 18.3 233 523-770 8-261 (261)
114 cd06654 STKc_PAK1 Catalytic do 100.0 4.1E-31 8.9E-36 280.1 16.7 228 525-765 24-269 (296)
115 cd05090 PTKc_Ror1 Catalytic do 100.0 6.4E-31 1.4E-35 276.8 18.0 233 525-769 9-282 (283)
116 cd05103 PTKc_VEGFR2 Catalytic 100.0 5.5E-31 1.2E-35 285.0 17.9 239 523-771 9-340 (343)
117 cd05111 PTK_HER3 Pseudokinase 100.0 1E-30 2.2E-35 274.6 19.4 233 525-770 11-268 (279)
118 cd05596 STKc_ROCK Catalytic do 100.0 4.2E-31 9.1E-36 288.5 17.0 232 522-765 44-303 (370)
119 cd05589 STKc_PKN Catalytic dom 100.0 7.1E-31 1.5E-35 282.0 18.5 224 527-765 5-256 (324)
120 cd05620 STKc_nPKC_delta Cataly 100.0 6.3E-31 1.4E-35 281.1 18.0 222 528-764 2-246 (316)
121 cd05148 PTKc_Srm_Brk Catalytic 100.0 7.1E-31 1.5E-35 272.9 17.8 232 524-770 9-261 (261)
122 cd07869 STKc_PFTAIRE1 Catalyti 100.0 4.8E-31 1E-35 280.6 16.9 229 524-765 8-287 (303)
123 cd05570 STKc_PKC Catalytic dom 100.0 6.2E-31 1.3E-35 281.6 17.8 223 528-765 2-251 (318)
124 cd05055 PTKc_PDGFR Catalytic d 100.0 9.5E-31 2E-35 278.1 19.0 238 523-771 37-302 (302)
125 cd05109 PTKc_HER2 Catalytic do 100.0 1.1E-30 2.3E-35 274.5 18.8 233 525-770 11-268 (279)
126 PTZ00283 serine/threonine prot 100.0 7.1E-31 1.5E-35 296.1 18.5 238 522-766 33-297 (496)
127 cd05045 PTKc_RET Catalytic dom 100.0 8.4E-31 1.8E-35 276.9 18.0 234 526-771 5-287 (290)
128 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 1.5E-30 3.1E-35 274.2 19.4 238 526-770 9-283 (284)
129 cd05113 PTKc_Btk_Bmx Catalytic 100.0 9.2E-31 2E-35 271.3 17.4 228 526-768 9-256 (256)
130 cd05060 PTKc_Syk_like Catalyti 100.0 1.7E-30 3.6E-35 269.5 19.0 231 528-770 2-255 (257)
131 cd06643 STKc_SLK Catalytic dom 100.0 1.3E-30 2.8E-35 274.3 18.3 227 526-765 10-261 (282)
132 cd05065 PTKc_EphR_B Catalytic 100.0 1.7E-30 3.7E-35 271.4 19.1 237 525-771 8-269 (269)
133 cd05605 STKc_GRK4_like Catalyt 100.0 1.1E-30 2.3E-35 275.4 17.6 225 527-765 6-260 (285)
134 cd05575 STKc_SGK Catalytic dom 100.0 6.9E-31 1.5E-35 281.9 16.4 219 528-761 2-242 (323)
135 cd05617 STKc_aPKC_zeta Catalyt 100.0 1.3E-30 2.9E-35 280.0 18.7 221 528-760 2-248 (327)
136 KOG0589 Serine/threonine prote 100.0 1.4E-31 3E-36 281.9 10.7 229 525-766 8-258 (426)
137 cd06624 STKc_ASK Catalytic dom 100.0 1.4E-30 3.1E-35 271.8 18.2 228 526-765 13-264 (268)
138 cd05091 PTKc_Ror2 Catalytic do 100.0 1.1E-30 2.4E-35 275.0 17.5 232 526-769 10-282 (283)
139 cd05062 PTKc_IGF-1R Catalytic 100.0 1.3E-30 2.7E-35 273.6 17.9 233 525-769 10-277 (277)
140 cd05063 PTKc_EphR_A2 Catalytic 100.0 1.9E-30 4.1E-35 270.8 19.1 236 525-771 9-268 (268)
141 cd05068 PTKc_Frk_like Catalyti 100.0 1.3E-30 2.8E-35 271.0 17.7 231 525-770 10-261 (261)
142 cd07862 STKc_CDK6 Catalytic do 100.0 9.7E-31 2.1E-35 276.4 17.1 230 526-765 6-286 (290)
143 cd05049 PTKc_Trk Catalytic dom 100.0 1.1E-30 2.5E-35 274.3 17.3 232 526-769 10-280 (280)
144 cd05614 STKc_MSK2_N N-terminal 100.0 1.3E-30 2.8E-35 281.0 18.1 228 526-765 5-266 (332)
145 cd05628 STKc_NDR1 Catalytic do 100.0 1.1E-30 2.3E-35 285.1 17.3 231 526-765 6-292 (363)
146 cd05621 STKc_ROCK2 Catalytic d 100.0 9.5E-31 2.1E-35 285.4 16.9 232 523-766 45-304 (370)
147 cd06646 STKc_MAP4K5 Catalytic 100.0 7E-31 1.5E-35 273.9 15.1 232 523-767 11-266 (267)
148 cd08529 STKc_FA2-like Catalyti 100.0 1.9E-30 4.1E-35 268.8 18.2 227 526-766 5-253 (256)
149 cd05047 PTKc_Tie Catalytic dom 100.0 1.9E-30 4.1E-35 271.3 18.2 229 528-771 2-269 (270)
150 cd05092 PTKc_TrkA Catalytic do 100.0 1.6E-30 3.5E-35 273.3 17.8 235 523-769 7-280 (280)
151 cd05599 STKc_NDR_like Catalyti 100.0 6.7E-31 1.5E-35 287.1 15.5 230 526-765 6-295 (364)
152 cd08229 STKc_Nek7 Catalytic do 100.0 1.5E-30 3.3E-35 271.4 17.5 233 526-770 7-265 (267)
153 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 2.9E-30 6.2E-35 269.2 19.3 234 525-770 6-265 (267)
154 cd05088 PTKc_Tie2 Catalytic do 100.0 1.5E-30 3.3E-35 276.7 17.5 234 523-771 9-281 (303)
155 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 2.4E-30 5.3E-35 272.4 18.9 237 527-770 10-281 (283)
156 cd05587 STKc_cPKC Catalytic do 100.0 1.8E-30 3.8E-35 278.9 18.0 219 527-760 6-246 (324)
157 cd05066 PTKc_EphR_A Catalytic 100.0 2.8E-30 6E-35 269.5 19.0 235 526-771 9-267 (267)
158 cd05573 STKc_ROCK_NDR_like Cat 100.0 5.5E-31 1.2E-35 286.2 14.2 230 526-765 6-284 (350)
159 cd05053 PTKc_FGFR Catalytic do 100.0 2.2E-30 4.7E-35 274.2 18.3 235 525-771 16-292 (293)
160 cd05625 STKc_LATS1 Catalytic d 100.0 1.2E-30 2.6E-35 286.9 16.7 230 526-765 6-304 (382)
161 cd05602 STKc_SGK1 Catalytic do 100.0 1.5E-30 3.1E-35 279.7 17.0 223 528-765 2-246 (325)
162 cd05582 STKc_RSK_N N-terminal 100.0 6.9E-31 1.5E-35 281.3 14.5 220 528-762 3-245 (318)
163 cd05059 PTKc_Tec_like Catalyti 100.0 2.2E-30 4.8E-35 268.4 17.8 228 525-767 8-255 (256)
164 KOG0032 Ca2+/calmodulin-depend 100.0 1E-30 2.2E-35 280.1 15.5 225 527-765 41-292 (382)
165 KOG4645 MAPKKK (MAP kinase kin 100.0 1.2E-32 2.7E-37 312.6 0.8 234 523-765 1237-1493(1509)
166 cd05603 STKc_SGK2 Catalytic do 100.0 1.3E-30 2.8E-35 279.6 16.4 219 528-761 2-242 (321)
167 cd06619 PKc_MKK5 Catalytic dom 100.0 3E-30 6.6E-35 271.0 18.9 225 527-766 7-253 (279)
168 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 2.3E-30 4.9E-35 270.5 17.7 229 528-768 2-268 (269)
169 cd05069 PTKc_Yes Catalytic dom 100.0 3.4E-30 7.3E-35 267.7 18.7 230 524-769 9-259 (260)
170 cd05604 STKc_SGK3 Catalytic do 100.0 1.1E-30 2.4E-35 280.6 15.4 222 528-764 2-245 (325)
171 cd06656 STKc_PAK3 Catalytic do 100.0 1.6E-30 3.6E-35 275.6 16.4 229 524-765 22-268 (297)
172 cd05042 PTKc_Aatyk Catalytic d 100.0 2.1E-30 4.6E-35 270.7 16.9 229 528-768 2-268 (269)
173 cd05629 STKc_NDR_like_fungal C 100.0 1.6E-30 3.4E-35 285.3 16.5 230 526-765 6-304 (377)
174 cd00192 PTKc Catalytic domain 100.0 3.5E-30 7.5E-35 267.3 18.2 229 528-768 2-262 (262)
175 cd05071 PTKc_Src Catalytic dom 100.0 3.9E-30 8.4E-35 267.6 18.6 230 525-770 10-260 (262)
176 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 3.5E-30 7.6E-35 267.6 18.1 229 526-770 11-260 (260)
177 cd06655 STKc_PAK2 Catalytic do 100.0 2.2E-30 4.8E-35 274.4 16.9 228 525-765 23-268 (296)
178 cd05616 STKc_cPKC_beta Catalyt 100.0 3.4E-30 7.4E-35 276.5 18.2 220 526-760 5-246 (323)
179 cd06625 STKc_MEKK3_like Cataly 100.0 4E-30 8.7E-35 267.5 18.0 234 523-766 4-260 (263)
180 cd06611 STKc_SLK_like Catalyti 100.0 2.3E-30 5E-35 272.1 16.1 230 523-765 7-261 (280)
181 cd05089 PTKc_Tie1 Catalytic do 100.0 3.1E-30 6.7E-35 273.6 17.1 231 526-771 7-276 (297)
182 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 3.2E-30 7E-35 270.0 16.7 220 528-767 2-273 (274)
183 cd05036 PTKc_ALK_LTK Catalytic 100.0 5.5E-30 1.2E-34 268.8 18.4 232 526-769 11-277 (277)
184 cd05032 PTKc_InsR_like Catalyt 100.0 3.5E-30 7.7E-35 270.1 16.9 233 525-769 10-277 (277)
185 cd05040 PTKc_Ack_like Catalyti 100.0 3.8E-30 8.3E-35 266.7 16.9 230 528-769 2-257 (257)
186 cd06645 STKc_MAP4K3 Catalytic 100.0 4E-30 8.7E-35 268.2 17.2 229 524-765 12-264 (267)
187 cd05586 STKc_Sck1_like Catalyt 100.0 1.4E-30 3E-35 280.5 14.1 223 529-765 1-252 (330)
188 PTZ00036 glycogen synthase kin 100.0 2.6E-30 5.7E-35 288.0 16.6 228 524-765 69-350 (440)
189 cd05598 STKc_LATS Catalytic do 100.0 1.4E-30 3E-35 285.8 14.1 231 525-765 5-300 (376)
190 cd05082 PTKc_Csk Catalytic dom 100.0 6.3E-30 1.4E-34 265.0 18.3 227 524-770 9-256 (256)
191 cd05101 PTKc_FGFR2 Catalytic d 100.0 4.6E-30 1E-34 273.2 17.7 237 523-771 17-297 (304)
192 cd05085 PTKc_Fer Catalytic dom 100.0 7.3E-30 1.6E-34 263.5 18.7 227 528-768 2-249 (250)
193 cd05043 PTK_Ryk Pseudokinase d 100.0 6.9E-30 1.5E-34 268.5 18.8 234 526-770 11-276 (280)
194 cd05098 PTKc_FGFR1 Catalytic d 100.0 3.7E-30 7.9E-35 274.4 16.7 238 522-771 19-300 (307)
195 cd05601 STKc_CRIK Catalytic do 100.0 1.3E-30 2.8E-35 280.8 13.2 228 525-765 5-262 (330)
196 cd05057 PTKc_EGFR_like Catalyt 100.0 9.2E-30 2E-34 267.4 19.3 232 526-770 12-268 (279)
197 cd06642 STKc_STK25-YSK1 Cataly 100.0 4.7E-30 1E-34 269.3 16.8 224 528-765 11-252 (277)
198 cd05630 STKc_GRK6 Catalytic do 100.0 7.8E-30 1.7E-34 268.7 18.5 226 527-765 6-260 (285)
199 PHA03212 serine/threonine kina 100.0 3.7E-30 8.1E-35 282.3 16.6 173 523-713 94-284 (391)
200 cd07876 STKc_JNK2 Catalytic do 100.0 4E-30 8.8E-35 280.2 16.7 183 524-714 24-224 (359)
201 cd05622 STKc_ROCK1 Catalytic d 100.0 5.3E-30 1.1E-34 279.8 17.3 233 522-766 44-304 (371)
202 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 2.1E-30 4.5E-35 269.0 13.3 221 528-768 2-258 (258)
203 cd06651 STKc_MEKK3 Catalytic d 100.0 1.1E-29 2.3E-34 264.9 18.7 233 524-765 5-260 (266)
204 cd05615 STKc_cPKC_alpha Cataly 100.0 7.9E-30 1.7E-34 273.6 18.2 219 527-760 6-246 (323)
205 cd06658 STKc_PAK5 Catalytic do 100.0 2.7E-30 5.9E-35 273.2 14.4 227 526-766 27-272 (292)
206 cd05056 PTKc_FAK Catalytic dom 100.0 9.3E-30 2E-34 266.0 18.2 231 526-770 11-265 (270)
207 cd05632 STKc_GRK5 Catalytic do 100.0 9.2E-30 2E-34 268.2 18.2 224 528-765 7-260 (285)
208 cd06628 STKc_MAPKKK_Byr2_like 100.0 8.9E-30 1.9E-34 265.6 17.8 229 527-765 6-263 (267)
209 cd05110 PTKc_HER4 Catalytic do 100.0 9E-30 1.9E-34 270.8 18.1 233 525-770 11-268 (303)
210 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 6.6E-30 1.4E-34 265.8 16.6 220 528-767 2-261 (262)
211 cd05039 PTKc_Csk_like Catalyti 100.0 1.1E-29 2.5E-34 263.1 18.3 228 523-770 8-256 (256)
212 cd07872 STKc_PCTAIRE2 Catalyti 100.0 6.8E-30 1.5E-34 272.6 16.9 228 524-765 9-285 (309)
213 KOG0607 MAP kinase-interacting 100.0 6E-31 1.3E-35 257.5 7.9 232 526-765 83-360 (463)
214 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 8.9E-30 1.9E-34 268.0 17.5 237 527-770 10-283 (284)
215 cd05041 PTKc_Fes_like Catalyti 100.0 1.3E-29 2.8E-34 261.8 18.3 229 528-769 2-251 (251)
216 cd05061 PTKc_InsR Catalytic do 100.0 1.4E-29 3.1E-34 267.2 19.0 233 526-770 11-278 (288)
217 cd07853 STKc_NLK Catalytic dom 100.0 5.5E-30 1.2E-34 280.5 16.4 232 526-765 5-287 (372)
218 cd06644 STKc_STK10_LOK Catalyt 100.0 8.2E-30 1.8E-34 269.6 17.0 227 526-765 17-268 (292)
219 cd08219 STKc_Nek3 Catalytic do 100.0 8.8E-30 1.9E-34 263.7 16.9 227 526-766 5-252 (255)
220 cd06637 STKc_TNIK Catalytic do 100.0 9.7E-30 2.1E-34 266.1 17.3 230 527-765 12-268 (272)
221 cd06640 STKc_MST4 Catalytic do 100.0 1.5E-29 3.3E-34 265.4 18.8 226 527-766 10-253 (277)
222 cd06638 STKc_myosinIIIA Cataly 100.0 9.9E-30 2.2E-34 268.1 17.3 236 522-766 19-283 (286)
223 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 1.7E-29 3.6E-34 266.2 19.0 238 527-771 10-284 (284)
224 cd05067 PTKc_Lck_Blk Catalytic 100.0 1.4E-29 3E-34 263.1 18.1 228 526-769 11-259 (260)
225 KOG1025 Epidermal growth facto 100.0 9E-31 2E-35 283.9 9.3 234 524-770 699-957 (1177)
226 cd06615 PKc_MEK Catalytic doma 100.0 1.6E-29 3.4E-34 269.5 18.7 226 526-766 6-287 (308)
227 cd07874 STKc_JNK3 Catalytic do 100.0 5.2E-30 1.1E-34 279.0 15.2 182 525-714 21-220 (355)
228 cd05099 PTKc_FGFR4 Catalytic d 100.0 1.7E-29 3.7E-34 270.1 18.9 237 522-770 13-293 (314)
229 cd06612 STKc_MST1_2 Catalytic 100.0 1.1E-29 2.4E-34 262.9 16.9 226 525-765 7-252 (256)
230 cd05097 PTKc_DDR_like Catalyti 100.0 7.3E-30 1.6E-34 270.5 15.8 234 525-769 9-295 (295)
231 cd06609 STKc_MST3_like Catalyt 100.0 1.6E-29 3.4E-34 264.8 18.2 225 527-765 7-250 (274)
232 cd05044 PTKc_c-ros Catalytic d 100.0 5.3E-30 1.1E-34 267.6 14.4 229 529-769 3-269 (269)
233 cd06613 STKc_MAP4K3_like Catal 100.0 1.2E-29 2.7E-34 263.6 16.9 229 524-765 6-259 (262)
234 cd05050 PTKc_Musk Catalytic do 100.0 1.2E-29 2.7E-34 267.7 16.9 235 523-769 7-288 (288)
235 PTZ00266 NIMA-related protein 100.0 1.2E-29 2.5E-34 294.4 17.8 234 522-765 14-294 (1021)
236 cd06659 STKc_PAK6 Catalytic do 100.0 5.7E-30 1.2E-34 271.4 14.1 226 526-765 26-270 (297)
237 cd08227 PK_STRAD_alpha Pseudok 100.0 1.6E-29 3.4E-34 271.9 17.8 179 529-715 6-213 (327)
238 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 9.1E-30 2E-34 268.4 15.5 226 526-765 6-261 (286)
239 PF00069 Pkinase: Protein kina 100.0 7.1E-30 1.5E-34 265.0 14.4 227 527-765 5-256 (260)
240 cd05051 PTKc_DDR Catalytic dom 100.0 1.9E-29 4E-34 267.4 17.8 235 523-769 7-296 (296)
241 cd06632 STKc_MEKK1_plant Catal 100.0 2E-29 4.3E-34 261.3 17.6 225 527-765 6-254 (258)
242 KOG0199 ACK and related non-re 100.0 2.1E-30 4.5E-35 276.6 10.1 229 527-767 116-369 (1039)
243 KOG0983 Mitogen-activated prot 100.0 1.3E-30 2.8E-35 250.2 7.7 229 523-765 94-348 (391)
244 cd05086 PTKc_Aatyk2 Catalytic 100.0 2.3E-29 5.1E-34 262.7 17.5 229 528-768 2-267 (268)
245 cd05633 STKc_GRK3 Catalytic do 100.0 3E-29 6.6E-34 263.4 18.4 224 529-766 2-255 (279)
246 cd05034 PTKc_Src_like Catalyti 100.0 2.9E-29 6.3E-34 260.8 18.1 231 524-769 9-260 (261)
247 cd05100 PTKc_FGFR3 Catalytic d 100.0 2.3E-29 5E-34 271.5 18.0 234 525-770 16-293 (334)
248 cd06630 STKc_MEKK1 Catalytic d 100.0 1.8E-29 3.9E-34 263.4 16.2 231 527-765 6-263 (268)
249 cd05046 PTK_CCK4 Pseudokinase 100.0 1.9E-29 4.1E-34 264.4 16.3 233 525-769 9-275 (275)
250 cd05073 PTKc_Hck Catalytic dom 100.0 3.9E-29 8.5E-34 259.7 18.5 232 523-770 8-260 (260)
251 cd07863 STKc_CDK4 Catalytic do 100.0 2.1E-29 4.4E-34 266.0 16.3 229 527-765 6-284 (288)
252 cd05627 STKc_NDR2 Catalytic do 100.0 9.8E-30 2.1E-34 277.3 14.3 230 526-765 6-292 (360)
253 KOG0986 G protein-coupled rece 100.0 3.7E-30 8E-35 263.1 10.1 221 525-759 189-434 (591)
254 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 2.6E-29 5.6E-34 264.7 16.9 228 526-766 10-266 (284)
255 cd07875 STKc_JNK1 Catalytic do 100.0 2.2E-29 4.7E-34 275.0 16.8 182 525-714 28-227 (364)
256 cd05597 STKc_DMPK_like Catalyt 100.0 2.2E-29 4.8E-34 271.1 16.6 228 526-765 6-265 (331)
257 cd06647 STKc_PAK_I Catalytic d 100.0 2E-29 4.4E-34 266.7 15.5 230 524-766 22-269 (293)
258 cd07861 STKc_CDK1_euk Catalyti 100.0 3.2E-29 7E-34 264.0 16.9 225 527-765 6-281 (285)
259 KOG0618 Serine/threonine phosp 100.0 1.4E-31 3.1E-36 295.1 -1.2 374 45-454 46-488 (1081)
260 cd06631 STKc_YSK4 Catalytic do 100.0 3.5E-29 7.5E-34 260.9 16.7 230 526-765 5-261 (265)
261 cd08223 STKc_Nek4 Catalytic do 100.0 5.5E-29 1.2E-33 258.0 18.1 226 527-765 6-253 (257)
262 PHA03211 serine/threonine kina 100.0 3.4E-29 7.5E-34 277.9 17.5 172 524-712 172-362 (461)
263 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 2.8E-29 6.1E-34 260.4 15.8 219 528-768 2-259 (259)
264 cd08221 STKc_Nek9 Catalytic do 100.0 5.9E-29 1.3E-33 257.6 18.2 225 528-766 7-253 (256)
265 cd06641 STKc_MST3 Catalytic do 100.0 6.3E-29 1.4E-33 260.7 18.6 226 527-766 10-253 (277)
266 cd06652 STKc_MEKK2 Catalytic d 100.0 5.4E-29 1.2E-33 259.4 18.0 231 526-765 7-260 (265)
267 cd08528 STKc_Nek10 Catalytic d 100.0 4.7E-29 1E-33 260.5 17.4 231 526-769 5-269 (269)
268 cd07868 STKc_CDK8 Catalytic do 100.0 4.8E-29 1E-33 267.1 17.8 177 527-713 7-217 (317)
269 cd05074 PTKc_Tyro3 Catalytic d 100.0 9.4E-29 2E-33 258.7 19.5 237 527-770 5-272 (273)
270 cd08217 STKc_Nek2 Catalytic do 100.0 5.5E-29 1.2E-33 258.9 17.6 231 527-766 6-262 (265)
271 cd05112 PTKc_Itk Catalytic dom 100.0 5.7E-29 1.2E-33 257.8 17.6 228 526-768 9-256 (256)
272 cd05095 PTKc_DDR2 Catalytic do 100.0 4.4E-29 9.4E-34 264.6 16.9 233 525-769 9-296 (296)
273 cd06648 STKc_PAK_II Catalytic 100.0 7.4E-29 1.6E-33 261.3 18.5 226 526-765 24-268 (285)
274 cd07873 STKc_PCTAIRE1 Catalyti 100.0 3.2E-29 6.9E-34 266.4 15.7 228 523-765 8-285 (301)
275 KOG4250 TANK binding protein k 100.0 1.4E-29 3E-34 273.4 13.0 187 522-716 14-228 (732)
276 cd06626 STKc_MEKK4 Catalytic d 100.0 6.4E-29 1.4E-33 258.5 17.6 231 526-765 5-260 (264)
277 smart00219 TyrKc Tyrosine kina 100.0 6.9E-29 1.5E-33 257.2 17.7 228 527-767 5-258 (258)
278 cd06629 STKc_MAPKKK_Bck1_like 100.0 4.9E-29 1.1E-33 260.8 16.6 229 526-765 6-268 (272)
279 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 1E-28 2.2E-33 260.5 19.0 229 525-765 5-265 (287)
280 cd05609 STKc_MAST Catalytic do 100.0 7E-29 1.5E-33 264.3 17.8 234 526-768 6-272 (305)
281 cd06639 STKc_myosinIIIB Cataly 100.0 6.5E-29 1.4E-33 262.6 17.4 234 523-765 24-286 (291)
282 KOG0596 Dual specificity; seri 100.0 9E-30 1.9E-34 266.3 10.2 225 525-765 365-626 (677)
283 cd06917 STKc_NAK1_like Catalyt 100.0 6E-29 1.3E-33 260.8 16.6 225 527-765 7-254 (277)
284 cd06617 PKc_MKK3_6 Catalytic d 100.0 6.7E-29 1.5E-33 261.3 17.0 227 526-765 6-260 (283)
285 cd08220 STKc_Nek8 Catalytic do 100.0 1.2E-28 2.7E-33 255.1 18.0 225 526-765 5-252 (256)
286 cd08218 STKc_Nek1 Catalytic do 100.0 1.1E-28 2.5E-33 255.5 17.7 225 527-765 6-252 (256)
287 cd05574 STKc_phototropin_like 100.0 1.1E-28 2.3E-33 264.3 17.9 230 527-765 7-288 (316)
288 cd05624 STKc_MRCK_beta Catalyt 100.0 6.4E-29 1.4E-33 267.5 16.2 228 526-765 6-265 (331)
289 cd07878 STKc_p38beta_MAPK11 Ca 100.0 5.3E-29 1.1E-33 269.8 15.6 229 525-765 19-297 (343)
290 cd05623 STKc_MRCK_alpha Cataly 100.0 8E-29 1.7E-33 266.9 16.9 229 526-766 6-266 (332)
291 cd06607 STKc_TAO Catalytic dom 100.0 8.8E-29 1.9E-33 263.7 17.0 223 525-765 19-266 (307)
292 KOG0586 Serine/threonine prote 100.0 2.4E-29 5.2E-34 268.3 12.5 225 523-765 58-305 (596)
293 cd07847 STKc_CDKL1_4 Catalytic 100.0 1.3E-28 2.7E-33 259.6 18.0 226 527-765 7-282 (286)
294 cd06657 STKc_PAK4 Catalytic do 100.0 1E-28 2.2E-33 261.1 17.3 225 527-765 26-269 (292)
295 cd05606 STKc_beta_ARK Catalyti 100.0 1.7E-28 3.7E-33 257.6 18.9 223 529-765 2-254 (278)
296 cd07867 STKc_CDC2L6 Catalytic 100.0 1.1E-28 2.5E-33 264.2 17.9 177 527-713 7-217 (317)
297 cd06608 STKc_myosinIII_like Ca 100.0 9.9E-29 2.1E-33 258.6 16.9 234 523-765 8-271 (275)
298 cd06610 STKc_OSR1_SPAK Catalyt 100.0 1.4E-28 3.1E-33 256.3 17.9 230 526-765 6-263 (267)
299 cd06635 STKc_TAO1 Catalytic do 100.0 1.5E-28 3.3E-33 263.1 18.4 224 526-767 30-278 (317)
300 cd05083 PTKc_Chk Catalytic dom 100.0 1.1E-28 2.5E-33 255.3 16.8 224 524-769 9-253 (254)
301 cd05580 STKc_PKA Catalytic dom 100.0 2E-28 4.3E-33 258.8 19.0 222 526-765 6-253 (290)
302 cd05572 STKc_cGK_PKG Catalytic 100.0 1.8E-28 4E-33 254.9 17.9 224 529-765 1-251 (262)
303 cd06636 STKc_MAP4K4_6 Catalyti 100.0 1.3E-28 2.8E-33 259.1 16.8 231 526-765 21-278 (282)
304 cd06605 PKc_MAPKK Catalytic do 100.0 9.8E-29 2.1E-33 257.4 15.6 227 526-765 6-256 (265)
305 KOG4717 Serine/threonine prote 100.0 3.4E-29 7.4E-34 258.7 11.6 226 524-765 21-269 (864)
306 PHA03207 serine/threonine kina 100.0 1.2E-28 2.5E-33 271.6 16.7 174 525-714 96-289 (392)
307 KOG1035 eIF-2alpha kinase GCN2 100.0 2.2E-29 4.8E-34 285.1 10.9 238 521-765 479-870 (1351)
308 cd07860 STKc_CDK2_3 Catalytic 100.0 8.4E-29 1.8E-33 260.8 14.4 225 527-765 6-280 (284)
309 cd07849 STKc_ERK1_2_like Catal 100.0 1.1E-28 2.4E-33 266.4 15.6 235 526-766 10-292 (336)
310 KOG0604 MAP kinase-activated p 100.0 8.9E-30 1.9E-34 247.6 6.2 225 527-765 68-321 (400)
311 cd06623 PKc_MAPKK_plant_like C 100.0 2.4E-28 5.3E-33 254.1 17.3 229 526-766 6-256 (264)
312 cd05579 STKc_MAST_like Catalyt 100.0 9.3E-29 2E-33 257.2 14.0 230 529-767 1-255 (265)
313 cd07839 STKc_CDK5 Catalytic do 100.0 8.8E-29 1.9E-33 260.6 13.8 226 527-765 6-280 (284)
314 cd05577 STKc_GRK Catalytic dom 100.0 2.8E-28 6E-33 255.9 17.4 223 529-765 1-253 (277)
315 PTZ00284 protein kinase; Provi 100.0 1.6E-28 3.4E-33 276.9 16.3 175 525-714 133-347 (467)
316 PHA03209 serine/threonine kina 100.0 1.2E-28 2.7E-33 267.9 14.9 169 524-712 69-256 (357)
317 cd06616 PKc_MKK4 Catalytic dom 100.0 1.7E-28 3.6E-33 259.1 15.3 227 526-765 9-266 (288)
318 KOG1006 Mitogen-activated prot 100.0 8.6E-31 1.9E-35 250.7 -1.9 230 523-765 66-326 (361)
319 cd07832 STKc_CCRK Catalytic do 100.0 2.5E-28 5.3E-33 257.4 16.5 226 527-765 6-281 (286)
320 cd07841 STKc_CDK7 Catalytic do 100.0 2.2E-28 4.7E-33 259.5 16.2 225 528-766 7-282 (298)
321 cd05578 STKc_Yank1 Catalytic d 100.0 1.5E-28 3.2E-33 255.0 14.3 225 526-764 5-253 (258)
322 cd06614 STKc_PAK Catalytic dom 100.0 4.1E-28 8.9E-33 255.8 17.4 227 525-765 23-269 (286)
323 cd07844 STKc_PCTAIRE_like Cata 100.0 3.6E-28 7.8E-33 256.9 16.9 178 525-715 9-207 (291)
324 KOG0690 Serine/threonine prote 100.0 7.9E-29 1.7E-33 243.0 10.8 226 523-764 170-422 (516)
325 cd06634 STKc_TAO2 Catalytic do 100.0 4.4E-28 9.6E-33 258.4 17.6 223 526-766 20-267 (308)
326 cd06627 STKc_Cdc7_like Catalyt 100.0 6E-28 1.3E-32 249.5 18.1 226 526-765 5-250 (254)
327 cd07842 STKc_CDK8_like Catalyt 100.0 4.3E-28 9.3E-33 259.5 17.0 181 527-715 6-219 (316)
328 cd07846 STKc_CDKL2_3 Catalytic 100.0 6.8E-29 1.5E-33 261.7 10.4 227 526-765 6-282 (286)
329 KOG0618 Serine/threonine phosp 100.0 1.4E-30 3.1E-35 287.2 -2.6 364 45-431 69-488 (1081)
330 cd06633 STKc_TAO3 Catalytic do 100.0 8.1E-28 1.8E-32 256.9 18.6 221 527-765 27-272 (313)
331 cd08225 STKc_Nek5 Catalytic do 100.0 4.1E-28 9E-33 251.3 15.7 225 527-765 6-253 (257)
332 cd05122 PKc_STE Catalytic doma 100.0 7.9E-28 1.7E-32 248.0 17.7 225 526-765 5-250 (253)
333 cd07843 STKc_CDC2L1 Catalytic 100.0 3.7E-28 7.9E-33 257.2 15.5 229 525-765 9-289 (293)
334 cd07835 STKc_CDK1_like Catalyt 100.0 3.3E-28 7.2E-33 256.0 15.1 225 527-765 5-279 (283)
335 cd05611 STKc_Rim15_like Cataly 100.0 5.6E-28 1.2E-32 251.0 16.5 223 528-767 3-249 (260)
336 cd06606 STKc_MAPKKK Catalytic 100.0 7.9E-28 1.7E-32 249.1 17.3 231 527-765 6-256 (260)
337 cd07865 STKc_CDK9 Catalytic do 100.0 7E-28 1.5E-32 257.1 17.0 188 523-714 14-226 (310)
338 cd06653 STKc_MEKK3_like_1 Cata 100.0 1E-27 2.2E-32 249.7 17.6 232 525-765 6-260 (264)
339 cd08216 PK_STRAD Pseudokinase 100.0 6.4E-28 1.4E-32 258.0 16.2 224 533-765 12-294 (314)
340 cd07836 STKc_Pho85 Catalytic d 100.0 8.9E-28 1.9E-32 252.9 16.9 226 526-765 5-280 (284)
341 PHA03390 pk1 serine/threonine- 100.0 1.4E-27 3E-32 249.1 18.0 217 528-765 23-261 (267)
342 cd07870 STKc_PFTAIRE2 Catalyti 100.0 9E-28 1.9E-32 253.9 16.7 178 525-715 9-207 (291)
343 cd07837 STKc_CdkB_plant Cataly 100.0 9.7E-28 2.1E-32 254.1 17.0 231 526-765 6-290 (295)
344 cd07833 STKc_CDKL Catalytic do 100.0 3.4E-28 7.3E-33 256.6 13.3 228 526-765 6-284 (288)
345 cd07855 STKc_ERK5 Catalytic do 100.0 3.8E-28 8.3E-33 262.0 13.9 234 526-765 10-293 (334)
346 cd08226 PK_STRAD_beta Pseudoki 100.0 6.3E-28 1.4E-32 259.6 15.3 178 530-715 9-213 (328)
347 KOG0200 Fibroblast/platelet-de 100.0 6.2E-28 1.3E-32 277.1 15.9 231 528-770 303-579 (609)
348 PLN00009 cyclin-dependent kina 100.0 1.8E-27 4E-32 251.9 17.6 227 525-765 6-283 (294)
349 cd07831 STKc_MOK Catalytic dom 100.0 1.6E-27 3.5E-32 250.6 17.0 224 527-765 5-278 (282)
350 cd07840 STKc_CDK9_like Catalyt 100.0 1.3E-27 2.8E-32 251.9 16.3 228 527-765 5-283 (287)
351 cd08530 STKc_CNK2-like Catalyt 99.9 9.6E-28 2.1E-32 248.4 14.8 223 527-765 6-252 (256)
352 cd06618 PKc_MKK7 Catalytic dom 99.9 1.2E-27 2.7E-32 253.5 15.9 232 522-766 16-273 (296)
353 cd07845 STKc_CDK10 Catalytic d 99.9 1.9E-27 4.2E-32 253.6 17.1 231 523-765 9-289 (309)
354 cd08215 STKc_Nek Catalytic dom 99.9 2.9E-27 6.2E-32 244.8 17.8 225 527-765 6-254 (258)
355 cd07852 STKc_MAPK15 Catalytic 99.9 1.6E-27 3.4E-32 257.6 16.2 234 525-766 11-295 (337)
356 cd05583 STKc_MSK_N N-terminal 99.9 2.2E-27 4.8E-32 250.5 16.9 230 527-768 6-265 (288)
357 cd07850 STKc_JNK Catalytic dom 99.9 1.7E-27 3.8E-32 258.9 16.5 180 526-714 21-219 (353)
358 cd07858 STKc_TEY_MAPK_plant Ca 99.9 1.6E-27 3.6E-32 257.3 15.3 233 526-766 10-291 (337)
359 cd07864 STKc_CDK12 Catalytic d 99.9 2.9E-27 6.2E-32 251.4 16.6 233 525-765 11-298 (302)
360 KOG4236 Serine/threonine prote 99.9 2.7E-28 6E-33 252.6 8.2 224 526-764 569-817 (888)
361 PHA02882 putative serine/threo 99.9 2.9E-27 6.3E-32 250.3 15.5 238 525-767 16-293 (294)
362 PTZ00024 cyclin-dependent prot 99.9 3.4E-27 7.3E-32 254.8 16.1 229 527-765 15-312 (335)
363 KOG0662 Cyclin-dependent kinas 99.9 2.9E-28 6.2E-33 220.0 6.1 176 526-714 7-205 (292)
364 cd07854 STKc_MAPK4_6 Catalytic 99.9 1.9E-27 4.2E-32 257.3 13.7 234 526-765 10-299 (342)
365 cd05613 STKc_MSK1_N N-terminal 99.9 8E-27 1.7E-31 246.5 18.0 227 527-765 6-267 (290)
366 cd07857 STKc_MPK1 Catalytic do 99.9 5E-27 1.1E-31 253.1 16.3 234 527-765 6-291 (332)
367 KOG0669 Cyclin T-dependent kin 99.9 8.4E-29 1.8E-33 235.0 1.8 239 523-765 19-314 (376)
368 cd05123 STKc_AGC Catalytic dom 99.9 7.4E-27 1.6E-31 240.9 16.2 219 529-762 1-240 (250)
369 cd07880 STKc_p38gamma_MAPK12 C 99.9 9.4E-27 2E-31 252.0 17.1 229 525-765 19-297 (343)
370 cd07879 STKc_p38delta_MAPK13 C 99.9 5.2E-27 1.1E-31 253.9 14.9 229 525-765 19-296 (342)
371 cd05581 STKc_PDK1 Catalytic do 99.9 7.4E-27 1.6E-31 245.1 14.8 229 526-765 6-276 (280)
372 cd05118 STKc_CMGC Catalytic do 99.9 9.2E-27 2E-31 244.9 15.3 225 527-765 5-279 (283)
373 cd07851 STKc_p38 Catalytic dom 99.9 5.8E-27 1.3E-31 253.7 12.9 231 523-765 17-297 (343)
374 cd07838 STKc_CDK4_6_like Catal 99.9 2.2E-26 4.8E-31 242.5 17.0 229 527-765 5-283 (287)
375 cd07866 STKc_BUR1 Catalytic do 99.9 8.8E-27 1.9E-31 248.7 14.1 238 523-765 10-307 (311)
376 cd07834 STKc_MAPK Catalytic do 99.9 7.1E-27 1.5E-31 251.8 13.4 234 527-765 6-288 (330)
377 cd05576 STKc_RPK118_like Catal 99.9 9.1E-27 2E-31 238.4 13.1 202 532-760 4-223 (237)
378 KOG0587 Traf2- and Nck-interac 99.9 3.7E-27 8E-32 259.3 10.7 235 522-765 20-281 (953)
379 cd07830 STKc_MAK_like Catalyti 99.9 1.1E-26 2.3E-31 244.5 13.8 224 527-765 5-279 (283)
380 cd08222 STKc_Nek11 Catalytic d 99.9 1.3E-26 2.9E-31 240.6 13.4 225 526-765 5-256 (260)
381 KOG0666 Cyclin C-dependent kin 99.9 9.3E-28 2E-32 234.5 4.3 181 523-712 26-240 (438)
382 cd05610 STKc_MASTL Catalytic d 99.9 3.6E-26 7.8E-31 266.7 18.2 139 525-671 8-152 (669)
383 cd07856 STKc_Sty1_Hog1 Catalyt 99.9 4.1E-26 8.8E-31 245.3 17.0 225 526-765 15-287 (328)
384 PHA03210 serine/threonine kina 99.9 1.5E-26 3.3E-31 261.7 13.9 177 523-711 150-367 (501)
385 cd07877 STKc_p38alpha_MAPK14 C 99.9 5.5E-26 1.2E-30 246.1 17.5 229 525-765 21-299 (345)
386 cd07829 STKc_CDK_like Catalyti 99.9 1.7E-26 3.6E-31 242.8 12.4 225 527-765 5-278 (282)
387 KOG0667 Dual-specificity tyros 99.9 3.3E-26 7.1E-31 247.0 14.6 171 526-713 191-389 (586)
388 KOG0696 Serine/threonine prote 99.9 3.9E-27 8.5E-32 237.6 5.8 179 525-715 353-553 (683)
389 KOG0612 Rho-associated, coiled 99.9 7.8E-27 1.7E-31 262.5 7.4 183 520-713 74-282 (1317)
390 KOG0984 Mitogen-activated prot 99.9 3.1E-26 6.7E-31 211.8 9.4 181 521-714 46-254 (282)
391 smart00220 S_TKc Serine/Threon 99.9 1.4E-25 3E-30 229.6 14.4 219 533-765 1-240 (244)
392 KOG0603 Ribosomal protein S6 k 99.9 4.1E-26 8.8E-31 245.0 10.1 221 522-765 323-562 (612)
393 KOG1151 Tousled-like protein k 99.9 6E-26 1.3E-30 230.9 9.3 234 526-764 468-739 (775)
394 KOG1027 Serine/threonine prote 99.9 1.8E-26 3.9E-31 252.8 5.0 219 529-765 517-766 (903)
395 KOG1024 Receptor-like protein 99.9 2.6E-25 5.7E-30 223.5 12.5 230 529-769 292-554 (563)
396 KOG0695 Serine/threonine prote 99.9 2E-25 4.3E-30 219.8 11.3 224 521-758 250-502 (593)
397 KOG0608 Warts/lats-like serine 99.9 2.3E-25 4.9E-30 235.6 12.1 188 523-718 631-877 (1034)
398 PLN03225 Serine/threonine-prot 99.9 6.1E-25 1.3E-29 249.9 15.7 235 521-765 132-449 (566)
399 KOG0614 cGMP-dependent protein 99.9 1.4E-26 3.1E-31 239.5 0.8 224 521-759 420-665 (732)
400 KOG0576 Mitogen-activated prot 99.9 3.2E-26 6.9E-31 244.4 2.0 234 519-765 13-270 (829)
401 KOG0668 Casein kinase II, alph 99.9 2.9E-25 6.3E-30 208.3 7.8 177 524-714 41-235 (338)
402 KOG4237 Extracellular matrix p 99.9 4.2E-27 9.2E-32 237.2 -5.0 286 36-355 50-357 (498)
403 PRK15387 E3 ubiquitin-protein 99.9 2.7E-24 6E-29 246.0 16.4 262 46-411 203-465 (788)
404 PRK15387 E3 ubiquitin-protein 99.9 2.6E-24 5.7E-29 246.2 15.7 244 44-364 222-465 (788)
405 PLN03224 probable serine/threo 99.9 4.1E-24 9E-29 236.9 14.9 239 521-765 145-499 (507)
406 PLN03210 Resistant to P. syrin 99.9 4.3E-23 9.4E-28 254.3 24.5 348 44-429 532-903 (1153)
407 PLN03210 Resistant to P. syrin 99.9 2.3E-22 5E-27 247.8 23.7 326 44-402 558-904 (1153)
408 PRK15370 E3 ubiquitin-protein 99.9 2.6E-23 5.6E-28 239.8 12.8 325 3-405 64-446 (754)
409 KOG1152 Signal transduction se 99.9 1.3E-23 2.8E-28 221.0 7.3 159 525-697 565-738 (772)
410 KOG0664 Nemo-like MAPK-related 99.9 2.4E-24 5.2E-29 206.8 0.0 186 521-713 53-259 (449)
411 KOG1345 Serine/threonine kinas 99.9 3.4E-23 7.4E-28 199.2 7.5 225 526-766 29-284 (378)
412 cd00180 PKc Catalytic domain o 99.9 4.1E-22 8.8E-27 198.8 15.3 205 529-766 1-214 (215)
413 PRK09188 serine/threonine prot 99.9 9.6E-22 2.1E-26 209.1 14.2 160 523-697 20-190 (365)
414 KOG0665 Jun-N-terminal kinase 99.9 7.9E-23 1.7E-27 201.7 4.8 177 527-713 23-218 (369)
415 PRK15370 E3 ubiquitin-protein 99.9 3.4E-22 7.3E-27 230.6 10.7 252 37-357 173-428 (754)
416 KOG0671 LAMMER dual specificit 99.9 2.5E-22 5.3E-27 202.9 6.8 171 526-713 94-310 (415)
417 smart00221 STYKc Protein kinas 99.9 8.5E-21 1.8E-25 191.9 16.1 177 527-714 5-202 (225)
418 KOG4237 Extracellular matrix p 99.8 5E-23 1.1E-27 207.9 -5.5 256 172-436 68-363 (498)
419 KOG0670 U4/U6-associated splic 99.8 2.5E-21 5.4E-26 201.3 4.6 175 525-715 436-638 (752)
420 KOG0195 Integrin-linked kinase 99.8 7.1E-21 1.5E-25 183.0 2.8 224 528-771 197-447 (448)
421 PLN00181 protein SPA1-RELATED; 99.8 1.5E-20 3.4E-25 225.0 5.9 184 574-765 28-264 (793)
422 KOG1167 Serine/threonine prote 99.8 4.2E-20 9.1E-25 189.5 7.8 180 524-713 39-279 (418)
423 cd05147 RIO1_euk RIO kinase fa 99.8 2.6E-19 5.7E-24 175.2 11.4 135 527-673 3-167 (190)
424 cd05145 RIO1_like RIO kinase f 99.8 1.4E-18 3E-23 170.8 13.9 137 527-675 3-169 (190)
425 KOG0617 Ras suppressor protein 99.8 1.3E-20 2.8E-25 169.6 -4.3 131 66-232 31-162 (264)
426 cd00116 LRR_RI Leucine-rich re 99.8 5E-20 1.1E-24 197.4 -1.2 265 165-430 17-318 (319)
427 smart00750 KIND kinase non-cat 99.7 2.2E-18 4.9E-23 167.5 9.0 136 615-770 12-169 (176)
428 KOG0617 Ras suppressor protein 99.7 2E-20 4.2E-25 168.4 -5.3 159 44-238 33-191 (264)
429 cd00116 LRR_RI Leucine-rich re 99.7 1.7E-19 3.7E-24 193.3 -1.7 259 48-333 2-291 (319)
430 PRK10345 hypothetical protein; 99.7 1.9E-17 4E-22 163.5 11.3 136 526-670 7-156 (210)
431 PRK12274 serine/threonine prot 99.7 6.8E-17 1.5E-21 156.1 12.9 169 526-712 7-207 (218)
432 KOG0590 Checkpoint kinase and 99.7 1.7E-18 3.6E-23 196.5 1.4 231 526-765 323-584 (601)
433 KOG1164 Casein kinase (serine/ 99.7 1.8E-16 3.9E-21 169.5 15.6 238 523-770 20-297 (322)
434 KOG1163 Casein kinase (serine/ 99.7 9E-17 2E-21 152.7 8.5 183 525-718 19-227 (341)
435 COG0515 SPS1 Serine/threonine 99.7 9E-16 2E-20 164.3 16.8 228 527-765 6-274 (384)
436 smart00090 RIO RIO-like kinase 99.7 9.6E-16 2.1E-20 155.3 13.9 135 527-674 34-199 (237)
437 KOG1165 Casein kinase (serine/ 99.6 1.1E-15 2.4E-20 151.9 11.3 180 527-717 34-241 (449)
438 PRK14879 serine/threonine prot 99.6 1.3E-15 2.7E-20 152.9 11.2 134 528-673 3-144 (211)
439 PLN03150 hypothetical protein; 99.6 3.6E-15 7.8E-20 172.1 13.4 123 2-143 372-503 (623)
440 cd05144 RIO2_C RIO kinase fami 99.6 6E-15 1.3E-19 146.2 12.7 132 527-674 21-176 (198)
441 PRK10359 lipopolysaccharide co 99.6 5.9E-15 1.3E-19 146.0 11.0 137 526-673 36-184 (232)
442 TIGR03724 arch_bud32 Kae1-asso 99.6 5.5E-15 1.2E-19 146.8 10.7 130 529-673 2-139 (199)
443 KOG1023 Natriuretic peptide re 99.6 5E-15 1.1E-19 160.4 9.9 190 572-770 1-224 (484)
444 PRK09605 bifunctional UGMP fam 99.6 7.6E-15 1.6E-19 167.7 11.9 132 526-673 338-477 (535)
445 KOG4158 BRPK/PTEN-induced prot 99.6 4.8E-15 1E-19 150.5 8.6 188 576-768 274-512 (598)
446 cd05120 APH_ChoK_like Aminogly 99.6 2.1E-14 4.5E-19 135.4 11.7 132 528-672 5-138 (155)
447 KOG1240 Protein kinase contain 99.6 1.4E-15 3E-20 172.0 4.2 228 522-767 24-292 (1431)
448 KOG0532 Leucine-rich repeat (L 99.6 1.5E-16 3.3E-21 168.2 -4.1 215 176-429 55-270 (722)
449 KOG1290 Serine/threonine prote 99.5 2.7E-14 5.8E-19 148.9 10.6 130 523-657 80-222 (590)
450 KOG0603 Ribosomal protein S6 k 99.5 1.5E-15 3.2E-20 164.2 0.1 170 529-714 2-193 (612)
451 cd05119 RIO RIO kinase family, 99.5 7.3E-14 1.6E-18 137.2 10.8 134 528-674 4-165 (187)
452 PRK01723 3-deoxy-D-manno-octul 99.5 2.7E-13 5.8E-18 137.8 11.8 136 527-672 37-191 (239)
453 PF14531 Kinase-like: Kinase-l 99.4 4.3E-13 9.3E-18 136.9 11.3 182 523-715 14-253 (288)
454 COG4886 Leucine-rich repeat (L 99.4 9.5E-14 2.1E-18 153.3 6.8 200 72-316 97-297 (394)
455 KOG0532 Leucine-rich repeat (L 99.4 1.4E-14 3E-19 153.6 -0.2 199 224-439 54-253 (722)
456 COG4886 Leucine-rich repeat (L 99.4 1.8E-13 3.9E-18 151.2 8.4 186 167-365 112-298 (394)
457 PLN03150 hypothetical protein; 99.4 4.6E-13 9.9E-18 154.7 9.9 116 346-468 420-538 (623)
458 TIGR01982 UbiB 2-polyprenylphe 99.3 4.8E-12 1E-16 139.8 10.7 141 526-675 122-309 (437)
459 KOG1166 Mitotic checkpoint ser 99.3 2.4E-12 5.3E-17 149.2 8.1 161 523-697 700-873 (974)
460 KOG0590 Checkpoint kinase and 99.3 5.4E-13 1.2E-17 151.8 -0.3 230 526-764 25-284 (601)
461 KOG1033 eIF-2alpha kinase PEK/ 99.3 7.2E-13 1.6E-17 140.9 0.2 156 597-763 330-509 (516)
462 cd05151 ChoK Choline Kinase (C 99.2 5.8E-11 1.3E-15 114.5 10.8 129 527-671 4-135 (170)
463 KOG1266 Protein kinase [Signal 99.2 2.6E-12 5.6E-17 128.1 0.8 189 571-765 120-330 (458)
464 PRK04750 ubiB putative ubiquin 99.2 1.4E-10 3E-15 129.6 12.3 139 527-675 125-316 (537)
465 KOG3207 Beta-tubulin folding c 99.2 5.6E-12 1.2E-16 130.4 0.7 206 44-286 121-340 (505)
466 PF14580 LRR_9: Leucine-rich r 99.2 2E-11 4.3E-16 116.0 4.1 63 170-233 63-126 (175)
467 KOG0606 Microtubule-associated 99.2 2E-11 4.3E-16 138.9 4.6 192 523-758 85-304 (1205)
468 KOG0531 Protein phosphatase 1, 99.1 8.6E-12 1.9E-16 138.0 0.6 196 128-357 70-268 (414)
469 KOG3207 Beta-tubulin folding c 99.1 5.7E-12 1.2E-16 130.3 -2.2 162 168-358 118-285 (505)
470 cd05146 RIO3_euk RIO kinase fa 99.1 1.1E-09 2.3E-14 106.4 12.9 133 527-672 3-173 (197)
471 KOG0531 Protein phosphatase 1, 99.1 1.2E-11 2.7E-16 136.8 -0.7 247 168-433 69-319 (414)
472 KOG0601 Cyclin-dependent kinas 99.1 6E-11 1.3E-15 128.9 3.8 227 528-765 121-378 (524)
473 PF14580 LRR_9: Leucine-rich r 99.1 1.4E-10 3.1E-15 110.1 5.2 83 194-285 17-101 (175)
474 KOG1259 Nischarin, modulator o 99.1 4.4E-11 9.5E-16 117.7 1.4 130 195-358 283-413 (490)
475 KOG1259 Nischarin, modulator o 99.0 9.1E-11 2E-15 115.5 1.0 135 165-310 278-413 (490)
476 cd05154 ACAD10_11_like Acyl-Co 99.0 8.1E-09 1.8E-13 104.2 13.7 141 528-671 5-205 (223)
477 PF08263 LRRNT_2: Leucine rich 98.9 5.6E-10 1.2E-14 79.9 2.6 40 1-40 2-43 (43)
478 KOG1243 Protein kinase [Genera 98.9 3.6E-09 7.8E-14 116.2 9.8 161 537-710 27-201 (690)
479 KOG1909 Ran GTPase-activating 98.9 1.3E-10 2.8E-15 117.4 -2.3 248 166-432 25-311 (382)
480 PF13855 LRR_8: Leucine rich r 98.9 1.2E-09 2.6E-14 85.4 3.3 59 172-231 2-60 (61)
481 PF13855 LRR_8: Leucine rich r 98.9 1.5E-09 3.3E-14 84.8 3.6 60 45-104 2-61 (61)
482 KOG1909 Ran GTPase-activating 98.8 1.2E-10 2.6E-15 117.6 -4.8 255 63-357 25-311 (382)
483 COG3642 Mn2+-dependent serine/ 98.7 6.1E-08 1.3E-12 90.7 10.2 129 529-674 4-142 (204)
484 PF01163 RIO1: RIO1 family; I 98.7 8E-08 1.7E-12 93.0 11.4 123 537-672 2-155 (188)
485 KOG3741 Poly(A) ribonuclease s 98.6 1.6E-07 3.5E-12 100.1 11.4 169 532-710 287-474 (655)
486 KOG4658 Apoptotic ATPase [Sign 98.6 2.4E-08 5.2E-13 118.2 4.4 203 68-309 523-730 (889)
487 KOG4658 Apoptotic ATPase [Sign 98.6 3.6E-08 7.9E-13 116.7 4.5 88 40-142 541-630 (889)
488 PRK15123 lipopolysaccharide co 98.6 8.5E-07 1.8E-11 91.2 13.6 131 537-672 38-194 (268)
489 KOG3087 Serine/threonine prote 98.6 4.2E-07 9E-12 84.6 10.0 134 529-672 15-165 (229)
490 KOG1859 Leucine-rich repeat pr 98.5 3.1E-09 6.6E-14 116.4 -6.5 108 167-285 183-292 (1096)
491 KOG1859 Leucine-rich repeat pr 98.5 2.7E-09 5.9E-14 116.8 -7.4 129 298-434 166-294 (1096)
492 KOG0601 Cyclin-dependent kinas 98.5 5.2E-08 1.1E-12 106.4 2.2 144 521-672 265-416 (524)
493 KOG4579 Leucine-rich repeat (L 98.4 1.9E-08 4E-13 88.4 -3.2 108 222-333 29-136 (177)
494 KOG4579 Leucine-rich repeat (L 98.3 1.3E-08 2.8E-13 89.4 -5.4 118 38-192 22-143 (177)
495 COG0478 RIO-like serine/threon 98.3 3.9E-06 8.4E-11 83.5 11.1 129 527-670 97-249 (304)
496 PF06293 Kdo: Lipopolysacchari 98.3 6E-06 1.3E-10 82.1 11.2 107 562-672 55-170 (206)
497 COG0661 AarF Predicted unusual 98.2 1.1E-05 2.5E-10 89.9 11.7 137 527-675 131-317 (517)
498 KOG0606 Microtubule-associated 98.2 3.9E-07 8.5E-12 104.7 0.1 225 528-761 811-1084(1205)
499 KOG2982 Uncharacterized conser 98.1 6.1E-07 1.3E-11 89.0 -0.8 213 32-287 36-264 (418)
500 PF06176 WaaY: Lipopolysacchar 98.0 6.4E-05 1.4E-09 73.6 12.7 125 538-671 46-182 (229)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=2e-92 Score=866.84 Aligned_cols=738 Identities=30% Similarity=0.504 Sum_probs=512.3
Q ss_pred ccHHHHHHHHhcCCCCCCCCCCCCCCCCCCccceeeeecCCCCcEEEEEcCCCCCcccCCccccCCCCCcEEEcCCCccc
Q 041479 2 PDKQALLAFKSKVDDDPFGALSTWNDSVNFCQWLGVTCSLKYQRVILLNLSGQNLTGTASPYIGNLTFLRLINLQQNNFS 81 (771)
Q Consensus 2 ~~~~~l~~~~~~~~~~~~~~~~~w~~~~~~c~w~~v~c~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 81 (771)
.|++||++||+++. +|.+.+++|+..++||.|.||+|... .+|+.|||++|++++.+++.|..+++|+.|+|++|+++
T Consensus 29 ~~~~~l~~~~~~~~-~~~~~~~~w~~~~~~c~w~gv~c~~~-~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n~~~ 106 (968)
T PLN00113 29 EELELLLSFKSSIN-DPLKYLSNWNSSADVCLWQGITCNNS-SRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLS 106 (968)
T ss_pred HHHHHHHHHHHhCC-CCcccCCCCCCCCCCCcCcceecCCC-CcEEEEEecCCCccccCChHHhCCCCCCEEECCCCccC
Confidence 58899999999984 67888899988889999999999864 69999999999999999999999999999999999999
Q ss_pred ccCCccc-cCCCCCCEEecccCcCcccCCcc--------cccCCcccccCCccccCCCCCCEEecccccCcCCC------
Q 041479 82 SNIPHEI-GRLFRLRHIIFNSNALQGQIPDS--------RLILNKLEGNIPSELGSLLKFKGLGLANNYFTGPI------ 146 (771)
Q Consensus 82 ~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~~--------~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~l------ 146 (771)
+.+|..+ .++++|++|+|++|.+++.+|.. .+..|.+++.+|..++++++|++|+|++|.+++.+
T Consensus 107 ~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~ 186 (968)
T PLN00113 107 GPIPDDIFTTSSSLRYLNLSNNNFTGSIPRGSIPNLETLDLSNNMLSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTN 186 (968)
T ss_pred CcCChHHhccCCCCCEEECcCCccccccCccccCCCCEEECcCCcccccCChHHhcCCCCCEEECccCcccccCChhhhh
Confidence 8888775 49999999999999998877753 25567777777877888888888888888776433
Q ss_pred -CccceeeecccccccccCccccCCCCCCEEecccCcCcccCChhhhhCCCCCcEEEeecCcccccCCccccCCCCCCEE
Q 041479 147 -PHLNMFQVSVYSLTGSIPIQLLNITSMEYFHVSENQLVGELPPHIGFTLPNVRILLLAGNQFFGNIPHSISNASKLEWL 225 (771)
Q Consensus 147 -p~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 225 (771)
++|+.|+++.|.+.+.+|..+.++++|++|+|++|++++.+|..+. .+++|++|++++|++++.+|..|.++++|+.|
T Consensus 187 l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~-~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L 265 (968)
T PLN00113 187 LTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIG-GLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYL 265 (968)
T ss_pred CcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHh-cCCCCCEEECcCceeccccChhHhCCCCCCEE
Confidence 3467777777777777777777777777777777776666666655 66666666666666666666666666666666
Q ss_pred EccccccCCCCCcCccc---------------------ccCCCCCcEEEccCccccccCChhhhhcccccceeecccCcC
Q 041479 226 DFANNSLTGLIPEDLDS---------------------LVNCTYLEVVSLSVNSLSGTLPNSLANFSSHLRYLYMSANPI 284 (771)
Q Consensus 226 ~Ls~N~l~~~~p~~~~~---------------------l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l 284 (771)
++++|++++..|..+.. +.++++|+.|++++|.+++.+|..+..++ +|+.|++++|.+
T Consensus 266 ~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~-~L~~L~L~~n~l 344 (968)
T PLN00113 266 FLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLP-RLQVLQLWSNKF 344 (968)
T ss_pred ECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCC-CCCEEECcCCCC
Confidence 66666665555544311 13445566666666666655666665554 577777777777
Q ss_pred cccCcccccccCCcceEecCCccceeccCccc------------------------cCCCCCCEEEccCCcc--------
Q 041479 285 SGSIPTEIGNLKNLIIIAIEKFILIRNIPISV------------------------GYLLKLQVLSLFENNI-------- 332 (771)
Q Consensus 285 ~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~------------------------~~l~~L~~L~Ls~N~l-------- 332 (771)
++.+|..++.+++|+.|++++|.+.+.+|..+ ..+++|+.|++++|++
T Consensus 345 ~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~ 424 (968)
T PLN00113 345 SGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEF 424 (968)
T ss_pred cCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhH
Confidence 77777777777777777777666654443322 2222233333333222
Q ss_pred ---------------------------------------------------------------cccCCcccccccccccc
Q 041479 333 ---------------------------------------------------------------SREIPSSLGNFTFLTEL 349 (771)
Q Consensus 333 ---------------------------------------------------------------~~~~p~~~~~l~~L~~L 349 (771)
++.+|..|..+++|+.|
T Consensus 425 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L 504 (968)
T PLN00113 425 TKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSFGSKRLENLDLSRNQFSGAVPRKLGSLSELMQL 504 (968)
T ss_pred hcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCcccccccceEEECcCCccCCccChhhhhhhccCEE
Confidence 22333333344445555
Q ss_pred cccCccceecCCcccccccce-eeecccCcccCCCCcCCCCCCCCCeEECCCCcccccCCcchhhhhcccccccEEECcC
Q 041479 350 NLCGNSIRGSVPSALGSCHQL-WLDLSHNHLTGPIPLAVGNPKSIPHLDLSKNELSGEIPSSLAWIFGYISIFAKLNLSY 428 (771)
Q Consensus 350 ~Ls~N~l~~~~p~~~~~l~~l-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~l~~L~~L~Ls~ 428 (771)
+|++|++.+.+|..+..++.| .|+|++|++++.+|..|..+++|+.|+|++|++++.+|..+. .++.|+.|++++
T Consensus 505 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~----~l~~L~~l~ls~ 580 (968)
T PLN00113 505 KLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLG----NVESLVQVNISH 580 (968)
T ss_pred ECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHh----cCcccCEEeccC
Confidence 555555555555555555556 666666666666666666677777777777777766666554 667777888888
Q ss_pred CCCCCCCCccccccccccccccCCCcccCCCCCCCCCCCCCCccccccccccceeeehhhhhHHHHHHHHH-HHHHHhhh
Q 041479 429 NNLDGDVPRKMIFKNASAISEAGNEKLCGGISELKLPPCTPSELKKREKSKGFKLMILLLSGLVGLILVMS-LLIINRLR 507 (771)
Q Consensus 429 N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~-~~~~~r~~ 507 (771)
|++.|.+|....+.++....+.||+.+|+..+....++|... .......+++++++++++++++++ +++++|+|
T Consensus 581 N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~~~~c~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 655 (968)
T PLN00113 581 NHLHGSLPSTGAFLAINASAVAGNIDLCGGDTTSGLPPCKRV-----RKTPSWWFYITCTLGAFLVLALVAFGFVFIRGR 655 (968)
T ss_pred CcceeeCCCcchhcccChhhhcCCccccCCccccCCCCCccc-----cccceeeeehhHHHHHHHHHHHHHHHHHHHHhh
Confidence 888887887767777777788999999987654456677421 111111122222222222222222 22222222
Q ss_pred cccc-c--ccCCC-cc-------------c----ccccccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHH
Q 041479 508 RQRT-V--TSSES-SS-------------R----KDLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFM 566 (771)
Q Consensus 508 ~~~~-~--~~~~~-~~-------------~----~~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~ 566 (771)
++.+ + ..... .. . ........+|+|.+|+||+|++..+++.||||++..... ...
T Consensus 656 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~----~~~ 731 (968)
T PLN00113 656 NNLELKRVENEDGTWELQFFDSKVSKSITINDILSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS----IPS 731 (968)
T ss_pred hcccccccccccccccccccccccchhhhHHHHHhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc----ccH
Confidence 2111 1 00000 00 0 011123358999999999999988888999999864332 123
Q ss_pred HHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEeccCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEe
Q 041479 567 AECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVH 646 (771)
Q Consensus 567 ~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH 646 (771)
.|++++++++|||||+++|+|.+.+ ..|+|||||++|+|.++.+.++|.++.+|+.|+|+|++|||+.+.++|+|
T Consensus 732 ~~~~~l~~l~HpnIv~~~~~~~~~~-----~~~lv~Ey~~~g~L~~~l~~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH 806 (968)
T PLN00113 732 SEIADMGKLQHPNIVKLIGLCRSEK-----GAYLIHEYIEGKNLSEVLRNLSWERRRKIAIGIAKALRFLHCRCSPAVVV 806 (968)
T ss_pred HHHHHHhhCCCCCcceEEEEEEcCC-----CCEEEEeCCCCCcHHHHHhcCCHHHHHHHHHHHHHHHHHhccCCCCCeec
Confidence 4688999999999999999998776 57999999999999988778999999999999999999999877789999
Q ss_pred cCCCCCCeeeCCCCceEEecccCccccCcccCCcccccccccccccccchh---------------HHHHHHHHHhCCCC
Q 041479 647 CDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRP 711 (771)
Q Consensus 647 rdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P 711 (771)
||+||+||+++.++.+++. ||.+...... ....||+.||||| |||++|||+||+.|
T Consensus 807 ~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~--------~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p 877 (968)
T PLN00113 807 GNLSPEKIIIDGKDEPHLR-LSLPGLLCTD--------TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSP 877 (968)
T ss_pred CCCCHHhEEECCCCceEEE-eccccccccC--------CCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCC
Confidence 9999999999999888876 6665432211 1235889999999 79999999999999
Q ss_pred CCccccCCccHHHHHHhhCCC-chhhhcCccc--------------cccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 712 TSDMFTEGLDLHNFVKMALPD-QILQVLDPLF--------------LVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 712 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--------------~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
|+........+.+|+...... .....+|+.+ ...+.+||+.||++||||+||++.|+++
T Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~ 951 (968)
T PLN00113 878 ADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESA 951 (968)
T ss_pred CCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHh
Confidence 976555555677776654431 2222233322 1234589999999999999999999986
No 2
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=2.2e-42 Score=424.46 Aligned_cols=380 Identities=31% Similarity=0.488 Sum_probs=272.5
Q ss_pred CcEEEEEcCCCCCcccCCccccCCCCCcEEEcCCCcccccCCccccCCCCCCEEecccCcCcccCCccc----------c
Q 041479 44 QRVILLNLSGQNLTGTASPYIGNLTFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNALQGQIPDSR----------L 113 (771)
Q Consensus 44 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~----------l 113 (771)
.+++.|+|++|++++.+|+.|+.+++|++|+|++|++++.+|..|+++++|++|++++|.+++.+|... +
T Consensus 188 ~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L 267 (968)
T PLN00113 188 TSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFL 267 (968)
T ss_pred cCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhcCCCCCEEECcCceeccccChhHhCCCCCCEEEC
Confidence 567777777777777777777777777777777777777777777777777777777777776665432 4
Q ss_pred cCCcccccCCccccCCCCCCEEecccccCcCCC-------CccceeeecccccccccCccccCCCCCCEEecccCcCccc
Q 041479 114 ILNKLEGNIPSELGSLLKFKGLGLANNYFTGPI-------PHLNMFQVSVYSLTGSIPIQLLNITSMEYFHVSENQLVGE 186 (771)
Q Consensus 114 ~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~l-------p~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ 186 (771)
..|.+.+.+|..+.++++|+.|++++|++++.+ +.|+.|+++.|.+++..|..+.++++|+.|++++|.+++.
T Consensus 268 ~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~ 347 (968)
T PLN00113 268 YQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGE 347 (968)
T ss_pred cCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCc
Confidence 456666666777777777777777777666433 3466666666666666666666666666666666666666
Q ss_pred CChhhhhCCCCCcEEEeecCcccccCCccccCCCCCCEEEccccccCCCCCcCcc---------------------cccC
Q 041479 187 LPPHIGFTLPNVRILLLAGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLD---------------------SLVN 245 (771)
Q Consensus 187 lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~---------------------~l~~ 245 (771)
+|..+. .+++|+.|++++|++++.+|..+..+++|+.|++++|++++..|..+. .+.+
T Consensus 348 ~p~~l~-~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~ 426 (968)
T PLN00113 348 IPKNLG-KHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTK 426 (968)
T ss_pred CChHHh-CCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhc
Confidence 665554 566666666666666655555555555555555555555554444331 0134
Q ss_pred CCCCcEEEccCccccccCChhhhhcccccceeecccCcCcccCcccccccCCcceEecCCccceeccCccccCCCCCCEE
Q 041479 246 CTYLEVVSLSVNSLSGTLPNSLANFSSHLRYLYMSANPISGSIPTEIGNLKNLIIIAIEKFILIRNIPISVGYLLKLQVL 325 (771)
Q Consensus 246 l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L 325 (771)
+++|+.|++++|.+++.+|..+..++ +|+.|++++|++.+.+|..+ ..++|+.|++++|.+.+.+|..+..+++|+.|
T Consensus 427 l~~L~~L~Ls~N~l~~~~~~~~~~l~-~L~~L~L~~n~~~~~~p~~~-~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L 504 (968)
T PLN00113 427 LPLVYFLDISNNNLQGRINSRKWDMP-SLQMLSLARNKFFGGLPDSF-GSKRLENLDLSRNQFSGAVPRKLGSLSELMQL 504 (968)
T ss_pred CCCCCEEECcCCcccCccChhhccCC-CCcEEECcCceeeeecCccc-ccccceEEECcCCccCCccChhhhhhhccCEE
Confidence 44555555555555555554444443 46666666666655555544 34677778888888888888889999999999
Q ss_pred EccCCcccccCCcccccccccccccccCccceecCCcccccccce-eeecccCcccCCCCcCCCCCCCCCeEECCCCccc
Q 041479 326 SLFENNISREIPSSLGNFTFLTELNLCGNSIRGSVPSALGSCHQL-WLDLSHNHLTGPIPLAVGNPKSIPHLDLSKNELS 404 (771)
Q Consensus 326 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 404 (771)
+|++|++++.+|..+..+++|++|+|++|.+++.+|..+..++.| .|||++|++++.+|..+..+++|+.|++++|+++
T Consensus 505 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~ 584 (968)
T PLN00113 505 KLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLH 584 (968)
T ss_pred ECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcce
Confidence 999999999999999999999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred ccCCcchhhhhcccccccEEECcCCCC
Q 041479 405 GEIPSSLAWIFGYISIFAKLNLSYNNL 431 (771)
Q Consensus 405 ~~~p~~l~~~~~~l~~L~~L~Ls~N~l 431 (771)
+.+|..- .+..+....+.+|+.
T Consensus 585 ~~~p~~~-----~~~~~~~~~~~~n~~ 606 (968)
T PLN00113 585 GSLPSTG-----AFLAINASAVAGNID 606 (968)
T ss_pred eeCCCcc-----hhcccChhhhcCCcc
Confidence 9999742 233444556677764
No 3
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-42 Score=344.96 Aligned_cols=232 Identities=25% Similarity=0.292 Sum_probs=198.4
Q ss_pred cccccccccccccceEEEEEecCCCeEEEEEEeecc-chhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEE
Q 041479 522 DLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLH-QRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRAL 600 (771)
Q Consensus 522 ~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~l 600 (771)
+......+|+|..|+|||++++.+++.+|+|.+... +....++..+|+++++.++||+||++||+|+.... ...|
T Consensus 80 dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~----~isI 155 (364)
T KOG0581|consen 80 DLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGE----EISI 155 (364)
T ss_pred HhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCc----eEEe
Confidence 455667799999999999999999999999999554 34567899999999999999999999999987651 3799
Q ss_pred EEEeccCCCCCCCc---ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCccc
Q 041479 601 VYEFMHHGSLESCP---RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVM 677 (771)
Q Consensus 601 v~e~~~~g~L~~~~---~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~ 677 (771)
+||||++|+|+... +++++...-+|+.+|++||.|||+. .+||||||||+|||+...|.+||||||.++.+...
T Consensus 156 ~mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~--~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS- 232 (364)
T KOG0581|consen 156 CMEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEE--RKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS- 232 (364)
T ss_pred ehhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhc--cCeeeccCCHHHeeeccCCCEEeccccccHHhhhh-
Confidence 99999999998873 4589999999999999999999974 58999999999999999999999999999876543
Q ss_pred CCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCcc---ccCCccHHHHHHhhCCCchhh-hc
Q 041479 678 SSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDM---FTEGLDLHNFVKMALPDQILQ-VL 738 (771)
Q Consensus 678 ~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~---~~~~~~~~~~~~~~~~~~~~~-~~ 738 (771)
...+++||..||||| ||+.++|+++|+.||... +..-..+..+.....|+..++ .+
T Consensus 233 -----~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~~~f 307 (364)
T KOG0581|consen 233 -----IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPEGEF 307 (364)
T ss_pred -----hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCcccC
Confidence 234578999999999 799999999999999754 223334555555556666666 48
Q ss_pred CccccccCcccChhchhhcCCHHHHHH
Q 041479 739 DPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 739 ~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
+++++.....|+++||++|||+.++++
T Consensus 308 S~ef~~FV~~CL~Kdp~~R~s~~qLl~ 334 (364)
T KOG0581|consen 308 SPEFRSFVSCCLRKDPSERPSAKQLLQ 334 (364)
T ss_pred CHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 999998899999999999999999875
No 4
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3e-41 Score=360.97 Aligned_cols=239 Identities=35% Similarity=0.542 Sum_probs=196.2
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
+....-+|+|++|+||+|...++ +.||||++........++|..|++++++++|||+|+|+|||.+.+. ..++||
T Consensus 77 Fs~~~~ig~Ggfg~VYkG~l~~~-~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~~----~~~LVY 151 (361)
T KOG1187|consen 77 FSESNLIGEGGFGTVYKGVLSDG-TVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYCLEGGE----HRLLVY 151 (361)
T ss_pred CchhcceecCCCeEEEEEEECCC-CEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEEecCCc----eEEEEE
Confidence 33445689999999999999887 5999998865543214569999999999999999999999998762 379999
Q ss_pred EeccCCCCCCC----cc-cCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCc-c
Q 041479 603 EFMHHGSLESC----PR-ILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPE-V 676 (771)
Q Consensus 603 e~~~~g~L~~~----~~-~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~-~ 676 (771)
|||++|+|+++ .. .++|..|.+||.++|+||+|||+.+.++|+||||||+|||+|+++.+||+|||+|+..+. .
T Consensus 152 Eym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~~~ 231 (361)
T KOG1187|consen 152 EYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPEGD 231 (361)
T ss_pred EccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcccCCccc
Confidence 99999999776 22 789999999999999999999999888999999999999999999999999999975543 2
Q ss_pred cCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccc-cCCccHHHHHHhhCCC-chhhhcC
Q 041479 677 MSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMF-TEGLDLHNFVKMALPD-QILQVLD 739 (771)
Q Consensus 677 ~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~ 739 (771)
.. . .....||.+|+||| |||+++|++||+.|.+... .....+.+|+...... ...+++|
T Consensus 232 ~~--~--~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD 307 (361)
T KOG1187|consen 232 TS--V--STTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKLREIVD 307 (361)
T ss_pred cc--e--eeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcchhheeC
Confidence 11 1 11116999999999 7999999999998887543 2333488888666653 6778888
Q ss_pred cccc--c------------cCcccChhchhhcCCHHHHHHHHHHh
Q 041479 740 PLFL--V------------GGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 740 ~~~~--~------------~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
+.+. . .+.+|++.+|.+||+|.+|+++|+.+
T Consensus 308 ~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~ 352 (361)
T KOG1187|consen 308 PRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGI 352 (361)
T ss_pred CCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhh
Confidence 8764 1 12299999999999999999999764
No 5
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-40 Score=352.28 Aligned_cols=230 Identities=31% Similarity=0.359 Sum_probs=194.2
Q ss_pred cccccccceEEEEEecCCCeEEEEEEeeccch--hhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEec
Q 041479 528 SYESLVKATVYKGILDLDQTFIAVKVLFLHQR--GALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFM 605 (771)
Q Consensus 528 ~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~~ 605 (771)
.+|.|.+|+||+|.++... .||||++..... ...++|.+|+.+|.+++|||||+++|+|.+... ..++|||||
T Consensus 48 ~iG~G~~g~V~~~~~~g~~-~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~----~~~iVtEy~ 122 (362)
T KOG0192|consen 48 VLGSGSFGTVYKGKWRGTD-VVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPG----SLCIVTEYM 122 (362)
T ss_pred hcccCCceeEEEEEeCCce-eEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC----ceEEEEEeC
Confidence 3899999999999998654 599999965432 226799999999999999999999999987642 368999999
Q ss_pred cCCCCCCC-----cccCCHHHHHHHHHHHHHHHHHHHhcCCCC-eEecCCCCCCeeeCCCC-ceEEecccCccccCcccC
Q 041479 606 HHGSLESC-----PRILSFLRRLNIAIDVASALEYLHHHCKKP-IVHCDLKPSNVLLDNDM-TAHMGDFGLTRFIPEVMS 678 (771)
Q Consensus 606 ~~g~L~~~-----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~-ivHrdlk~~NILl~~~~-~~kl~DfGla~~~~~~~~ 678 (771)
++|+|.++ .+.+++..+++++.|||+|+.|||+. + ||||||||+|||++.++ .+||+|||+++......
T Consensus 123 ~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~- 198 (362)
T KOG0192|consen 123 PGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK- 198 (362)
T ss_pred CCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhEEEcCCCCEEEECCCccceeecccc-
Confidence 99999776 35799999999999999999999996 5 99999999999999997 99999999998665432
Q ss_pred Ccccccccccccccccchh-----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCcc
Q 041479 679 SNQCSSVGLKGTVGYATPE-----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPL 741 (771)
Q Consensus 679 ~~~~~~~~~~gt~~y~aPE-----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 741 (771)
.......||+.||||| |||++||++||+.||.+... .......+....++.++..+++.
T Consensus 199 ---~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~-~~~~~~v~~~~~Rp~~p~~~~~~ 274 (362)
T KOG0192|consen 199 ---TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP-VQVASAVVVGGLRPPIPKECPPH 274 (362)
T ss_pred ---ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH-HHHHHHHHhcCCCCCCCccCCHH
Confidence 1222357999999999 79999999999999998755 33344444556666667668888
Q ss_pred ccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 742 FLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 742 ~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
+...+.+||..||++||++.+++..|+.+
T Consensus 275 l~~l~~~CW~~dp~~RP~f~ei~~~l~~~ 303 (362)
T KOG0192|consen 275 LSSLMERCWLVDPSRRPSFLEIVSRLESI 303 (362)
T ss_pred HHHHHHHhCCCCCCcCCCHHHHHHHHHHH
Confidence 88888899999999999999999999865
No 6
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.6e-41 Score=340.60 Aligned_cols=231 Identities=22% Similarity=0.236 Sum_probs=194.9
Q ss_pred cccccccccccccceEEEEEecCCCeEEEEEEeeccch-------hhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCC
Q 041479 522 DLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQR-------GALKSFMAECQALRNIRHRNLVKIITACSTSDFQG 594 (771)
Q Consensus 522 ~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~-------~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 594 (771)
..+..-++|+|.+|.|-+|..+.+++.||||++....- ....+..+|+++|++++|||||++++++...+
T Consensus 173 ~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d--- 249 (475)
T KOG0615|consen 173 YYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD--- 249 (475)
T ss_pred eeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC---
Confidence 34566789999999999999999999999999965421 11234579999999999999999999998887
Q ss_pred ceeEEEEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCC---CceEEeccc
Q 041479 595 NYFRALVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDND---MTAHMGDFG 668 (771)
Q Consensus 595 ~~~~~lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~---~~~kl~DfG 668 (771)
+.|||||||+||+|.++ .+.+.+.....++.|++.|+.|||++ ||+||||||+|||+..+ ..+||+|||
T Consensus 250 --s~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~---GI~HRDiKPeNILl~~~~e~~llKItDFG 324 (475)
T KOG0615|consen 250 --SSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQ---GIIHRDIKPENILLSNDAEDCLLKITDFG 324 (475)
T ss_pred --ceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHc---CcccccCCcceEEeccCCcceEEEecccc
Confidence 67999999999999877 55677888899999999999999997 99999999999999765 789999999
Q ss_pred CccccCcccCCcccccccccccccccchh------------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhC
Q 041479 669 LTRFIPEVMSSNQCSSVGLKGTVGYATPE------------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMAL 730 (771)
Q Consensus 669 la~~~~~~~~~~~~~~~~~~gt~~y~aPE------------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~ 730 (771)
+|+..+.. ....+.||||.|.||| +||++|-+++|..||++.+.......++.++.+
T Consensus 325 lAK~~g~~-----sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y 399 (475)
T KOG0615|consen 325 LAKVSGEG-----SFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRY 399 (475)
T ss_pred hhhccccc-----eehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcc
Confidence 99987643 2345689999999999 699999999999999998765544566677777
Q ss_pred C--CchhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 731 P--DQILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 731 ~--~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
+ +..+.-++.+-...+.+++..||++|||+.|+++
T Consensus 400 ~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~ 436 (475)
T KOG0615|consen 400 AFGPLQWDRISEEALDLINWMLVVDPENRPSADEALN 436 (475)
T ss_pred cccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence 6 3455666666666777999999999999999985
No 7
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=7.3e-41 Score=349.93 Aligned_cols=370 Identities=20% Similarity=0.224 Sum_probs=288.2
Q ss_pred cEEEEEcCCCCCcccCCccccCCCCCcEEEcCCCcccccCCccccCCCCCCEEecccCcCcccCCcccccCCcccccCCc
Q 041479 45 RVILLNLSGQNLTGTASPYIGNLTFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNALQGQIPDSRLILNKLEGNIPS 124 (771)
Q Consensus 45 ~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~l~~n~l~~~~p~ 124 (771)
.+++||+++|.|+.+-+..|.++++|+.++|.+|.++ .+|...+...+|+.|+|.+|.|+ ..-.+
T Consensus 79 ~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~--------------sv~se 143 (873)
T KOG4194|consen 79 QTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLIS--------------SVTSE 143 (873)
T ss_pred ceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeeeccccc--------------cccHH
Confidence 4666888888888777777888888888888888887 47766666667888888888755 34455
Q ss_pred cccCCCCCCEEecccccCcC----CCC---ccceeeecccccccccCccccCCCCCCEEecccCcCcccCChhhhhCCCC
Q 041479 125 ELGSLLKFKGLGLANNYFTG----PIP---HLNMFQVSVYSLTGSIPIQLLNITSMEYFHVSENQLVGELPPHIGFTLPN 197 (771)
Q Consensus 125 ~~~~l~~L~~L~Ls~N~l~~----~lp---~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~ 197 (771)
++..++.|+.||||.|.|+. .+| +++.|+|+.|.|+......|.++.+|..|.|+.|.++ ++|...|.+|++
T Consensus 144 ~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLsrNrit-tLp~r~Fk~L~~ 222 (873)
T KOG4194|consen 144 ELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLSRNRIT-TLPQRSFKRLPK 222 (873)
T ss_pred HHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeeccccccccccccccccchheeeecccCccc-ccCHHHhhhcch
Confidence 67788888888888888873 233 3788888888888888888888888888888888888 888888867888
Q ss_pred CcEEEeecCcccccCCccccCCCCCCEEEccccccCCCCCcCcccccCCCCCcEEEccCccccccCChhhhhccccccee
Q 041479 198 VRILLLAGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSLSGTLPNSLANFSSHLRYL 277 (771)
Q Consensus 198 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L 277 (771)
|+.|+|..|+|.-..--+|.+|++|+.|.|..|.|..+-...| ..|.++++|+|+.|+++..-..+++++. +|+.|
T Consensus 223 L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~F---y~l~kme~l~L~~N~l~~vn~g~lfgLt-~L~~L 298 (873)
T KOG4194|consen 223 LESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAF---YGLEKMEHLNLETNRLQAVNEGWLFGLT-SLEQL 298 (873)
T ss_pred hhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccccCcce---eeecccceeecccchhhhhhcccccccc-hhhhh
Confidence 8888888888875556778888888888888888887766666 7778888888888888866666777776 68888
Q ss_pred ecccCcCcccCcccccccCCcceEecCCccceeccCccccCCCCCCEEEccCCcccccCCcccccccccccccccCccce
Q 041479 278 YMSANPISGSIPTEIGNLKNLIIIAIEKFILIRNIPISVGYLLKLQVLSLFENNISREIPSSLGNFTFLTELNLCGNSIR 357 (771)
Q Consensus 278 ~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 357 (771)
+||+|.|..+-++++.-.++|+.|+|++|++....+.+|..+..|++|+|++|+++..-..+|..+++|+.|||++|.|+
T Consensus 299 ~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls 378 (873)
T KOG4194|consen 299 DLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELS 378 (873)
T ss_pred ccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEE
Confidence 88888888888888888888888888888888888888888888888888888888766778888888888888888888
Q ss_pred ecCCc---ccccccce-eeecccCcccCCCCcCCCCCCCCCeEECCCCcccccCCcchhhhhcccccccEEECcCCCCCC
Q 041479 358 GSVPS---ALGSCHQL-WLDLSHNHLTGPIPLAVGNPKSIPHLDLSKNELSGEIPSSLAWIFGYISIFAKLNLSYNNLDG 433 (771)
Q Consensus 358 ~~~p~---~~~~l~~l-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~l~~L~~L~Ls~N~l~~ 433 (771)
..+.+ .|..++.| .|+|.+|+|..+...+|.++..|++|||.+|.|..+-|++|. .+ .|++|-+..-.+-|
T Consensus 379 ~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe----~m-~Lk~Lv~nSssflC 453 (873)
T KOG4194|consen 379 WCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFE----PM-ELKELVMNSSSFLC 453 (873)
T ss_pred EEEecchhhhccchhhhheeecCceeeecchhhhccCcccceecCCCCcceeecccccc----cc-hhhhhhhcccceEE
Confidence 76554 45556666 688888888766666788888888888888888777777654 55 66777776666656
Q ss_pred CCCccc
Q 041479 434 DVPRKM 439 (771)
Q Consensus 434 ~~p~~~ 439 (771)
++.-.|
T Consensus 454 DCql~W 459 (873)
T KOG4194|consen 454 DCQLKW 459 (873)
T ss_pred eccHHH
Confidence 655433
No 8
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-39 Score=328.72 Aligned_cols=181 Identities=30% Similarity=0.465 Sum_probs=160.6
Q ss_pred cccccccccccccceEEEEEecCCCeEEEEEEeecc--chhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEE
Q 041479 522 DLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLH--QRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRA 599 (771)
Q Consensus 522 ~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 599 (771)
++...-.+|.|.||+||+|+++.++..||||.+... ..+..+....|+.+++.++|||||++++++.+++ +.|
T Consensus 11 ~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~-----~i~ 85 (429)
T KOG0595|consen 11 DYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDD-----FIY 85 (429)
T ss_pred cceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCC-----eEE
Confidence 344445599999999999999999999999999776 4667788999999999999999999999999888 789
Q ss_pred EEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCC------CceEEecccCc
Q 041479 600 LVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDND------MTAHMGDFGLT 670 (771)
Q Consensus 600 lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~------~~~kl~DfGla 670 (771)
+|||||.||||.++ .+.+++.....++.|+|.|+++||+. +||||||||+|||++.. -.+||+|||+|
T Consensus 86 lVMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfA 162 (429)
T KOG0595|consen 86 LVMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHEN---NIIHRDLKPQNILLSTTARNDTSPVLKIADFGFA 162 (429)
T ss_pred EEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcceEEeccCCCCCCCceEEecccchh
Confidence 99999999999887 45789999999999999999999985 99999999999999764 46899999999
Q ss_pred cccCcccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCcc
Q 041479 671 RFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDM 715 (771)
Q Consensus 671 ~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~ 715 (771)
|.+.... ...+.||++.||||| .|+++|++++|+.||+..
T Consensus 163 R~L~~~~-----~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~ 217 (429)
T KOG0595|consen 163 RFLQPGS-----MAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAE 217 (429)
T ss_pred hhCCchh-----HHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCcccc
Confidence 9887532 344578999999999 599999999999999753
No 9
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=8.2e-41 Score=349.52 Aligned_cols=388 Identities=21% Similarity=0.212 Sum_probs=336.9
Q ss_pred cEEEEEcCCCCCcccCCccccCC--CCCcEEEcCCCcccccCCccccCCCCCCEEecccCcCcccCCcccccCCcccccC
Q 041479 45 RVILLNLSGQNLTGTASPYIGNL--TFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNALQGQIPDSRLILNKLEGNI 122 (771)
Q Consensus 45 ~l~~L~Ls~n~l~~~~~~~~~~l--~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~l~~n~l~~~~ 122 (771)
+...||.+.+.|..+.-..+.++ +.-++||+|+|+|+.+.+..|.++++|+.+++.+|.++ .+
T Consensus 53 ~~~lldcs~~~lea~~~~~l~g~lp~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt---------------~I 117 (873)
T KOG4194|consen 53 NTRLLDCSDRELEAIDKSRLKGFLPSQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT---------------RI 117 (873)
T ss_pred CceeeecCccccccccccccCCcCccceeeeeccccccccCcHHHHhcCCcceeeeeccchhh---------------hc
Confidence 56778888888875422222222 22456999999999999999999999999999999987 67
Q ss_pred CccccCCCCCCEEecccccCcC-------CCCccceeeecccccccccCccccCCCCCCEEecccCcCcccCChhhhhCC
Q 041479 123 PSELGSLLKFKGLGLANNYFTG-------PIPHLNMFQVSVYSLTGSIPIQLLNITSMEYFHVSENQLVGELPPHIGFTL 195 (771)
Q Consensus 123 p~~~~~l~~L~~L~Ls~N~l~~-------~lp~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l 195 (771)
|.......+|+.|+|.+|.|+. -+|.|+.+|||.|.|+......|..-.++++|+|++|.|+ .+...-|.++
T Consensus 118 P~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~sfp~~~ni~~L~La~N~It-~l~~~~F~~l 196 (873)
T KOG4194|consen 118 PRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLSRNLISEIPKPSFPAKVNIKKLNLASNRIT-TLETGHFDSL 196 (873)
T ss_pred ccccccccceeEEeeeccccccccHHHHHhHhhhhhhhhhhchhhcccCCCCCCCCCceEEeecccccc-cccccccccc
Confidence 7766677789999999999983 4677999999999999777778888889999999999999 8888888899
Q ss_pred CCCcEEEeecCcccccCCccccCCCCCCEEEccccccCCCCCcCcccccCCCCCcEEEccCccccccCChh-hhhccccc
Q 041479 196 PNVRILLLAGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSLSGTLPNS-LANFSSHL 274 (771)
Q Consensus 196 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~~L 274 (771)
.+|..|.|++|+|+...+..|.+|++|+.|||..|+|.-.-- ..|.+|++|+.|.|..|.++ .+.++ |..+ .++
T Consensus 197 nsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~---ltFqgL~Sl~nlklqrN~I~-kL~DG~Fy~l-~km 271 (873)
T KOG4194|consen 197 NSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEG---LTFQGLPSLQNLKLQRNDIS-KLDDGAFYGL-EKM 271 (873)
T ss_pred chheeeecccCcccccCHHHhhhcchhhhhhccccceeeehh---hhhcCchhhhhhhhhhcCcc-cccCcceeee-ccc
Confidence 999999999999998888999999999999999999984322 34588999999999999999 55554 4555 489
Q ss_pred ceeecccCcCcccCcccccccCCcceEecCCccceeccCccccCCCCCCEEEccCCcccccCCcccccccccccccccCc
Q 041479 275 RYLYMSANPISGSIPTEIGNLKNLIIIAIEKFILIRNIPISVGYLLKLQVLSLFENNISREIPSSLGNFTFLTELNLCGN 354 (771)
Q Consensus 275 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 354 (771)
++|+|+.|+++..-..++.+++.|+.|++++|.+...-+.++...++|++|+|++|+|+...+..|..+..|++|+|++|
T Consensus 272 e~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~N 351 (873)
T KOG4194|consen 272 EHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHN 351 (873)
T ss_pred ceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhccccc
Confidence 99999999999888889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceecCCcccccccce-eeecccCcccCCCCc---CCCCCCCCCeEECCCCcccccCCcchhhhhcccccccEEECcCCC
Q 041479 355 SIRGSVPSALGSCHQL-WLDLSHNHLTGPIPL---AVGNPKSIPHLDLSKNELSGEIPSSLAWIFGYISIFAKLNLSYNN 430 (771)
Q Consensus 355 ~l~~~~p~~~~~l~~l-~L~Ls~N~l~~~~p~---~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~l~~L~~L~Ls~N~ 430 (771)
+|+..-..+|..+++| .|||++|.|++.+.+ .|.++++|+.|+|.+|+|. .+|.. .|..+..|+.|||.+|.
T Consensus 352 si~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk-~I~kr---Afsgl~~LE~LdL~~Na 427 (873)
T KOG4194|consen 352 SIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLK-SIPKR---AFSGLEALEHLDLGDNA 427 (873)
T ss_pred chHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceee-ecchh---hhccCcccceecCCCCc
Confidence 9998888899999999 899999999987765 5888999999999999999 56552 46699999999999999
Q ss_pred CCCCCCccccccccccccccCCCcccC
Q 041479 431 LDGDVPRKMIFKNASAISEAGNEKLCG 457 (771)
Q Consensus 431 l~~~~p~~~~~~~~~~~~~~~n~~lc~ 457 (771)
|...-|..+.-..+..+.+.....+|+
T Consensus 428 iaSIq~nAFe~m~Lk~Lv~nSssflCD 454 (873)
T KOG4194|consen 428 IASIQPNAFEPMELKELVMNSSSFLCD 454 (873)
T ss_pred ceeecccccccchhhhhhhcccceEEe
Confidence 987777766655777777777777886
No 10
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7.2e-38 Score=330.02 Aligned_cols=231 Identities=26% Similarity=0.361 Sum_probs=196.8
Q ss_pred ccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEe
Q 041479 525 LNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEF 604 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~ 604 (771)
..-.+|+|-||.||.|.+.... .||||.++... ...++|.+|+++|++++|+|||+++|+|..++ .+||||||
T Consensus 210 l~~~LG~G~FG~V~~g~~~~~~-~vavk~ik~~~-m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~-----piyIVtE~ 282 (468)
T KOG0197|consen 210 LIRELGSGQFGEVWLGKWNGST-KVAVKTIKEGS-MSPEAFLREAQIMKKLRHEKLVKLYGVCTKQE-----PIYIVTEY 282 (468)
T ss_pred HHHHhcCCccceEEEEEEcCCC-cccceEEeccc-cChhHHHHHHHHHHhCcccCeEEEEEEEecCC-----ceEEEEEe
Confidence 3456899999999999998765 89999997663 34588999999999999999999999998876 57999999
Q ss_pred ccCCCCCCC-----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCC
Q 041479 605 MHHGSLESC-----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSS 679 (771)
Q Consensus 605 ~~~g~L~~~-----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 679 (771)
|+.|+|.++ ...+...+.+.++.|||+|++||+++ ++|||||.++|||++++..+||+|||+||...+..
T Consensus 283 m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~-- 357 (468)
T KOG0197|consen 283 MPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESK---NYIHRDLAARNILVDEDLVVKISDFGLARLIGDDE-- 357 (468)
T ss_pred cccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhC---CccchhhhhhheeeccCceEEEcccccccccCCCc--
Confidence 999999777 34578889999999999999999996 89999999999999999999999999999544332
Q ss_pred cccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhhhcCcccc
Q 041479 680 NQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFL 743 (771)
Q Consensus 680 ~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 743 (771)
.....+..-...|.||| |||++||++| |+.||..+. .....+.+..+.+-..++.+.+.+.
T Consensus 358 -Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~ms--n~ev~~~le~GyRlp~P~~CP~~vY 434 (468)
T KOG0197|consen 358 -YTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMS--NEEVLELLERGYRLPRPEGCPDEVY 434 (468)
T ss_pred -eeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCC--HHHHHHHHhccCcCCCCCCCCHHHH
Confidence 22333444577899999 8999999999 999998753 3346677777777666777788888
Q ss_pred ccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 744 VGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 744 ~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
.++..||..+|++|||.+.+...|+++
T Consensus 435 ~lM~~CW~~~P~~RPtF~~L~~~l~~~ 461 (468)
T KOG0197|consen 435 ELMKSCWHEDPEDRPTFETLREVLEDF 461 (468)
T ss_pred HHHHHHhhCCcccCCCHHHHHHHHHHh
Confidence 888999999999999999999998875
No 11
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.5e-37 Score=327.68 Aligned_cols=228 Identities=21% Similarity=0.214 Sum_probs=187.6
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeecc---chhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLH---QRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRA 599 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 599 (771)
+...--+|+|+||+||.++..++++.||+|++... +....+...+||++.+.++|||||+++++|++.+ ..|
T Consensus 20 Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~-----nVY 94 (592)
T KOG0575|consen 20 YKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSN-----NVY 94 (592)
T ss_pred eeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCC-----ceE
Confidence 34445589999999999999888899999999654 4567789999999999999999999999998887 789
Q ss_pred EEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcc
Q 041479 600 LVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676 (771)
Q Consensus 600 lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~ 676 (771)
||.|+|+.|+|..+ .+.+++.++..+..||+.||.|||+. +|+|||||..|++++++..+||+|||+|..+...
T Consensus 95 ivLELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~ 171 (592)
T KOG0575|consen 95 IVLELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYD 171 (592)
T ss_pred EEEEecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhc---CceecccchhheeecCcCcEEecccceeeeecCc
Confidence 99999999999766 56899999999999999999999996 8999999999999999999999999999877643
Q ss_pred cCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCcc
Q 041479 677 MSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPL 741 (771)
Q Consensus 677 ~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 741 (771)
.. ...+.||||.|.||| +||++|-|+.|++||+.-. -...+..+....+ ..+..++..
T Consensus 172 ~E----rk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~-vkety~~Ik~~~Y--~~P~~ls~~ 244 (592)
T KOG0575|consen 172 GE----RKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKT-VKETYNKIKLNEY--SMPSHLSAE 244 (592)
T ss_pred cc----ccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccch-HHHHHHHHHhcCc--ccccccCHH
Confidence 32 234578999999999 5999999999999997521 1112223332222 223344444
Q ss_pred ccccCcccChhchhhcCCHHHHHH
Q 041479 742 FLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 742 ~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
-++.+.++|.+||++|||+++|+.
T Consensus 245 A~dLI~~lL~~~P~~Rpsl~~vL~ 268 (592)
T KOG0575|consen 245 AKDLIRKLLRPNPSERPSLDEVLD 268 (592)
T ss_pred HHHHHHHHhcCCcccCCCHHHHhc
Confidence 445566899999999999999985
No 12
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.5e-38 Score=302.18 Aligned_cols=234 Identities=21% Similarity=0.234 Sum_probs=188.0
Q ss_pred ccccccccccceEEEEEecCCCeEEEEEEeecc--chhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEE
Q 041479 525 LNVSYESLVKATVYKGILDLDQTFIAVKVLFLH--QRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
....+|.|.||+|||++...++..||.|.+.-+ +.+..++...|+.++++++|||||+++++-...+.+ ..+|||
T Consensus 23 Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~e---vlnivm 99 (375)
T KOG0591|consen 23 ILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNE---VLNIVM 99 (375)
T ss_pred HHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccch---hhHHHH
Confidence 344579999999999999999999999999644 356678999999999999999999999854433322 478999
Q ss_pred EeccCCCCCCC-------cccCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEecCCCCCCeeeCCCCceEEecccCcccc
Q 041479 603 EFMHHGSLESC-------PRILSFLRRLNIAIDVASALEYLHHHCKKP--IVHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673 (771)
Q Consensus 603 e~~~~g~L~~~-------~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~--ivHrdlk~~NILl~~~~~~kl~DfGla~~~ 673 (771)
|||.+|||.+. .+.+++..+++++.|++.||.++|+.. ++ |+||||||.||+++.+|.+|++|||+++.+
T Consensus 100 E~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~-~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l 178 (375)
T KOG0591|consen 100 ELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKI-PRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFL 178 (375)
T ss_pred HhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccc-cccceeeccCcchheEEcCCCceeeccchhHhHh
Confidence 99999999776 456899999999999999999999853 34 999999999999999999999999999987
Q ss_pred CcccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHH-HHHhhCCCchhhh
Q 041479 674 PEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHN-FVKMALPDQILQV 737 (771)
Q Consensus 674 ~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~-~~~~~~~~~~~~~ 737 (771)
.... ....+.+|||+||+|| +||++|||+.-..||.+- .-..+.+ +..+.+|+-..+.
T Consensus 179 ~s~~----tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~--n~~~L~~KI~qgd~~~~p~~~ 252 (375)
T KOG0591|consen 179 SSKT----TFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD--NLLSLCKKIEQGDYPPLPDEH 252 (375)
T ss_pred cchh----HHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc--cHHHHHHHHHcCCCCCCcHHH
Confidence 6543 2345678999999999 699999999999999653 1112222 2233333333366
Q ss_pred cCccccccCcccChhchhhcCCHHHHHHHHH
Q 041479 738 LDPLFLVGGVQEGEETAEENIKKGQIRESLI 768 (771)
Q Consensus 738 ~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~ 768 (771)
.+..+...+..|+..||+.||+...+++.++
T Consensus 253 YS~~l~~li~~ci~vd~~~RP~t~~~v~di~ 283 (375)
T KOG0591|consen 253 YSTDLRELINMCIAVDPEQRPDTVPYVQDIQ 283 (375)
T ss_pred hhhHHHHHHHHHccCCcccCCCcchHHHHHH
Confidence 6777777777999999999999666665554
No 13
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=3.5e-37 Score=299.61 Aligned_cols=179 Identities=21% Similarity=0.277 Sum_probs=153.5
Q ss_pred cccccccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEE
Q 041479 524 LLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALV 601 (771)
Q Consensus 524 ~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv 601 (771)
..-..+|+|++|+|||++++++|+.||||++.... +...+-.+|||+++++++|||+|.++++|.... .+++|
T Consensus 5 E~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkr-----klhLV 79 (396)
T KOG0593|consen 5 EKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKR-----KLHLV 79 (396)
T ss_pred hhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcc-----eeEEE
Confidence 34566899999999999999999999999995543 334567899999999999999999999987765 78999
Q ss_pred EEeccCCCCCC---CcccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccC
Q 041479 602 YEFMHHGSLES---CPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMS 678 (771)
Q Consensus 602 ~e~~~~g~L~~---~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 678 (771)
+|||+..-|.+ +...++.....+|..|++.|+.|+|++ +||||||||+|||++.+|.+|+||||+|+.+.....
T Consensus 80 FE~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd 156 (396)
T KOG0593|consen 80 FEYCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGD 156 (396)
T ss_pred eeecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEecCCcEEeccchhhHhhcCCcc
Confidence 99998765543 355688889999999999999999987 899999999999999999999999999998774332
Q ss_pred Ccccccccccccccccchh----------------HHHHHHHHHhCCCCCCc
Q 041479 679 SNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSD 714 (771)
Q Consensus 679 ~~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~ 714 (771)
. -+..+.|.+|+||| .||++.||++|++-|.+
T Consensus 157 ~----YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG 204 (396)
T KOG0593|consen 157 N----YTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPG 204 (396)
T ss_pred h----hhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCC
Confidence 1 22457899999999 49999999999987764
No 14
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-36 Score=308.36 Aligned_cols=236 Identities=23% Similarity=0.250 Sum_probs=195.3
Q ss_pred ccccccccccccccceEEEEEecCCCeEEEEEEeeccch-hhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEE
Q 041479 521 KDLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQR-GALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRA 599 (771)
Q Consensus 521 ~~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 599 (771)
..+.....+|.|..|+||+|+....++.||||++..++- ...+.+.+|+..|+.++|||||+++..|..++ ..|
T Consensus 26 ~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~-----~LW 100 (516)
T KOG0582|consen 26 KDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDS-----ELW 100 (516)
T ss_pred cceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecc-----eeE
Confidence 445667788999999999999999999999999987753 34688999999999999999999999998887 899
Q ss_pred EEEEeccCCCCCCC-----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccC
Q 041479 600 LVYEFMHHGSLESC-----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIP 674 (771)
Q Consensus 600 lv~e~~~~g~L~~~-----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~ 674 (771)
+||.||.+|++.+. ...+++..+..|.+++++||.|||++ |.||||||+.||||+++|.+||+|||.+..+.
T Consensus 101 vVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~ 177 (516)
T KOG0582|consen 101 VVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQN---GHIHRDVKAGNILIDSDGTVKLADFGVSASLF 177 (516)
T ss_pred EeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhc---CceecccccccEEEcCCCcEEEcCceeeeeec
Confidence 99999999999765 44588888999999999999999997 99999999999999999999999999987766
Q ss_pred cccCCcccccccccccccccchh-----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCC------
Q 041479 675 EVMSSNQCSSVGLKGTVGYATPE-----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALP------ 731 (771)
Q Consensus 675 ~~~~~~~~~~~~~~gt~~y~aPE-----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~------ 731 (771)
..+..........+||+.||||| ||++..|+++|..||.+..+..+ +..-..+..|
T Consensus 178 ~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkv-Ll~tLqn~pp~~~t~~ 256 (516)
T KOG0582|consen 178 DSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKV-LLLTLQNDPPTLLTSG 256 (516)
T ss_pred ccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHH-HHHHhcCCCCCccccc
Confidence 55533333326678999999999 79999999999999988655443 3333444443
Q ss_pred --CchhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 732 --DQILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 732 --~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
.+.....+..++.....|+++||++|||+++++.
T Consensus 257 ~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk 292 (516)
T KOG0582|consen 257 LDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLK 292 (516)
T ss_pred CChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 2233444445555566999999999999999874
No 15
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.9e-36 Score=334.30 Aligned_cols=234 Identities=25% Similarity=0.328 Sum_probs=192.8
Q ss_pred ccccccccccceEEEEEecC-----CCeEEEEEEeeccchh-hHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeE
Q 041479 525 LNVSYESLVKATVYKGILDL-----DQTFIAVKVLFLHQRG-ALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFR 598 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~-----~~~~vAvK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 598 (771)
..-++|+|.||.||+|+... ..+.||||.++..... ..++|.+|+++++.++|||||+|+|+|.+++ -.
T Consensus 490 ~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~-----P~ 564 (774)
T KOG1026|consen 490 FKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGD-----PL 564 (774)
T ss_pred ehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCC-----ee
Confidence 45679999999999998753 3468999999776544 7889999999999999999999999999988 67
Q ss_pred EEEEEeccCCCCCCC-------------ccc----CCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCc
Q 041479 599 ALVYEFMHHGSLESC-------------PRI----LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMT 661 (771)
Q Consensus 599 ~lv~e~~~~g~L~~~-------------~~~----l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~ 661 (771)
|+|+|||..|||.++ ... ++..+.+.||.|||.|++||-++ .+|||||..+|+||.++..
T Consensus 565 ~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRNCLVge~l~ 641 (774)
T KOG1026|consen 565 CMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRNCLVGENLV 641 (774)
T ss_pred EEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhhceeccceE
Confidence 999999999999776 123 78889999999999999999986 8999999999999999999
Q ss_pred eEEecccCccccCcccCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHH
Q 041479 662 AHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNF 725 (771)
Q Consensus 662 ~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~ 725 (771)
+||+|||++|.....+.+.. .....-..+||+|| |||++||+++ |+.||.+.. ....+..+
T Consensus 642 VKIsDfGLsRdiYssDYYk~--~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glS-n~EVIe~i 718 (774)
T KOG1026|consen 642 VKISDFGLSRDIYSSDYYKV--RGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLS-NQEVIECI 718 (774)
T ss_pred EEecccccchhhhhhhhhcc--cCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccc-hHHHHHHH
Confidence 99999999997654443221 11122367899999 8999999999 999997753 23223333
Q ss_pred HHhhCCCchhhhcCccccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 726 VKMALPDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 726 ~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
..+.+ -..++.+...+..++..||+..|++||+++||-.+|+.+
T Consensus 719 ~~g~l-L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~ 762 (774)
T KOG1026|consen 719 RAGQL-LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAW 762 (774)
T ss_pred HcCCc-ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHH
Confidence 33433 556667777777888899999999999999999999874
No 16
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1e-36 Score=313.34 Aligned_cols=237 Identities=24% Similarity=0.283 Sum_probs=188.9
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
+....-+|.|.+|+||.+....++...|||.+...+....+.+.+|+.+|++++|||||+++|.....+. ..++++|
T Consensus 19 ~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~---~~~~i~m 95 (313)
T KOG0198|consen 19 WSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSREN---DEYNIFM 95 (313)
T ss_pred hhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccC---eeeEeee
Confidence 4455668999999999999998888999999977643336779999999999999999999997444331 2579999
Q ss_pred EeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCC-CCceEEecccCccccCccc
Q 041479 603 EFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN-DMTAHMGDFGLTRFIPEVM 677 (771)
Q Consensus 603 e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~-~~~~kl~DfGla~~~~~~~ 677 (771)
||+++|+|.++ ...+++..+.++..|+++||+|||++ +||||||||+|||++. ++.+||+|||+++.....
T Consensus 96 Ey~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~- 171 (313)
T KOG0198|consen 96 EYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKPANILLDPSNGDVKLADFGLAKKLESK- 171 (313)
T ss_pred eccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCcccceEEEeCCCCeEEeccCccccccccc-
Confidence 99999999877 22689999999999999999999986 9999999999999999 799999999999876541
Q ss_pred CCcccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCcc
Q 041479 678 SSNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPL 741 (771)
Q Consensus 678 ~~~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 741 (771)
...........||+.||||| +||++.||+||+.||.+.......+.........+.+++.+++.
T Consensus 172 ~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~~~~P~ip~~ls~~ 251 (313)
T KOG0198|consen 172 GTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGREDSLPEIPDSLSDE 251 (313)
T ss_pred cccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHhccCCCCCCCcccCHH
Confidence 11122233567999999999 69999999999999987411111122222222223566666666
Q ss_pred ccccCcccChhchhhcCCHHHHHHH
Q 041479 742 FLVGGVQEGEETAEENIKKGQIRES 766 (771)
Q Consensus 742 ~~~~~~~cl~~~p~~Rpt~~~vl~~ 766 (771)
.+....+|++.||++|||+.++++.
T Consensus 252 a~~Fl~~C~~~~p~~Rpta~eLL~h 276 (313)
T KOG0198|consen 252 AKDFLRKCFKRDPEKRPTAEELLEH 276 (313)
T ss_pred HHHHHHHHhhcCcccCcCHHHHhhC
Confidence 6677779999999999999999864
No 17
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-36 Score=302.95 Aligned_cols=225 Identities=25% Similarity=0.226 Sum_probs=180.7
Q ss_pred cccccccccccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCce
Q 041479 520 RKDLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNY 596 (771)
Q Consensus 520 ~~~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~ 596 (771)
..++...-.+|.|++|+||.++.+++++.||+|+++... .+..+...+|..++.+++||.||+++..|.+.+
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~----- 98 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEE----- 98 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCC-----
Confidence 345556667899999999999999999999999996553 345678899999999999999999999877766
Q ss_pred eEEEEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCcccc
Q 041479 597 FRALVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673 (771)
Q Consensus 597 ~~~lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~ 673 (771)
.+|+|+||+.||+|..+ .+.+++..+..++.+|+.||.|||+. +|||||+||+|||+|.+|+++++|||+++..
T Consensus 99 kLylVld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPENILLd~~GHi~LtDFgL~k~~ 175 (357)
T KOG0598|consen 99 KLYLVLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSK---GIIYRDLKPENILLDEQGHIKLTDFGLCKED 175 (357)
T ss_pred eEEEEEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHeeecCCCcEEEeccccchhc
Confidence 89999999999999766 44789999999999999999999985 9999999999999999999999999999854
Q ss_pred CcccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhc
Q 041479 674 PEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVL 738 (771)
Q Consensus 674 ~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 738 (771)
-... ....++|||+.||||| +||++|||++|.+||.+... ......+..... ...+..+
T Consensus 176 ~~~~----~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~-~~~~~~I~~~k~-~~~p~~l 249 (357)
T KOG0598|consen 176 LKDG----DATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDV-KKMYDKILKGKL-PLPPGYL 249 (357)
T ss_pred ccCC----CccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccH-HHHHHHHhcCcC-CCCCccC
Confidence 3322 2233479999999999 69999999999999965311 111122222221 2233445
Q ss_pred CccccccCcccChhchhhcC
Q 041479 739 DPLFLVGGVQEGEETAEENI 758 (771)
Q Consensus 739 ~~~~~~~~~~cl~~~p~~Rp 758 (771)
++..+....+.++.||++|.
T Consensus 250 s~~ardll~~LL~rdp~~RL 269 (357)
T KOG0598|consen 250 SEEARDLLKKLLKRDPRQRL 269 (357)
T ss_pred CHHHHHHHHHHhccCHHHhc
Confidence 55555566688899999995
No 18
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.2e-36 Score=316.90 Aligned_cols=231 Identities=22% Similarity=0.244 Sum_probs=196.9
Q ss_pred cccccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEE
Q 041479 522 DLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALV 601 (771)
Q Consensus 522 ~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv 601 (771)
.+.....+|+|..|.||.|+...+++.||||++........+-.+.|+.+|+..+|+|||.+++.|...+ ..|+|
T Consensus 274 ~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~d-----eLWVV 348 (550)
T KOG0578|consen 274 KYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGD-----ELWVV 348 (550)
T ss_pred hhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccc-----eeEEE
Confidence 3444567899999999999999999999999998877666678899999999999999999999988776 78999
Q ss_pred EEeccCCCCCCC--cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCC
Q 041479 602 YEFMHHGSLESC--PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSS 679 (771)
Q Consensus 602 ~e~~~~g~L~~~--~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 679 (771)
||||+||+|.+. ...+++.++..|+.++++||+|||.+ +|+|||||.+|||+..+|.+||+|||++..+.....
T Consensus 349 MEym~ggsLTDvVt~~~~~E~qIA~Icre~l~aL~fLH~~---gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~- 424 (550)
T KOG0578|consen 349 MEYMEGGSLTDVVTKTRMTEGQIAAICREILQGLKFLHAR---GIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQS- 424 (550)
T ss_pred EeecCCCchhhhhhcccccHHHHHHHHHHHHHHHHHHHhc---ceeeeccccceeEeccCCcEEEeeeeeeeccccccC-
Confidence 999999999887 44689999999999999999999986 999999999999999999999999999987765443
Q ss_pred cccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCC-CchhhhcCcccc
Q 041479 680 NQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALP-DQILQVLDPLFL 743 (771)
Q Consensus 680 ~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 743 (771)
...+.+|||+||||| +|++++||+-|++||-...+.. .++-++....| -..++.+++.++
T Consensus 425 ---KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~Plr-AlyLIa~ng~P~lk~~~klS~~~k 500 (550)
T KOG0578|consen 425 ---KRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR-ALYLIATNGTPKLKNPEKLSPELK 500 (550)
T ss_pred ---ccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHH-HHHHHhhcCCCCcCCccccCHHHH
Confidence 345678999999999 7999999999999995321111 13333444444 466778888888
Q ss_pred ccCcccChhchhhcCCHHHHHH
Q 041479 744 VGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 744 ~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
+...+||+.|+.+||++.|+++
T Consensus 501 dFL~~cL~~dv~~RasA~eLL~ 522 (550)
T KOG0578|consen 501 DFLDRCLVVDVEQRASAKELLE 522 (550)
T ss_pred HHHHHHhhcchhcCCCHHHHhc
Confidence 8888999999999999999985
No 19
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-36 Score=317.27 Aligned_cols=230 Identities=23% Similarity=0.314 Sum_probs=186.3
Q ss_pred CCcccccccccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCc
Q 041479 516 ESSSRKDLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGN 595 (771)
Q Consensus 516 ~~~~~~~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~ 595 (771)
...+|........+|+|+.|.||.|+++ ++.||||+++.-+ ..+|+-|++++||||+.+.|+|....
T Consensus 119 WeiPFe~IsELeWlGSGaQGAVF~Grl~--netVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVCtqsP---- 185 (904)
T KOG4721|consen 119 WEIPFEEISELEWLGSGAQGAVFLGRLH--NETVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVCTQSP---- 185 (904)
T ss_pred ccCCHHHhhhhhhhccCcccceeeeecc--CceehhHHHhhhh-------hhhHHHHHhccCcceeeEeeeecCCc----
Confidence 3445555556667899999999999987 4479999885332 24788899999999999999998776
Q ss_pred eeEEEEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccc
Q 041479 596 YFRALVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRF 672 (771)
Q Consensus 596 ~~~~lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~ 672 (771)
.+|||||||..|.|... .+.+.....+.+..+||.|+.|||.+ .|||||||.-||||..+..+||+|||.++.
T Consensus 186 -cyCIiMEfCa~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs~~d~VKIsDFGTS~e 261 (904)
T KOG4721|consen 186 -CYCIIMEFCAQGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILISYDDVVKISDFGTSKE 261 (904)
T ss_pred -eeEEeeeccccccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEeeccceEEeccccchHh
Confidence 78999999999999876 45677788899999999999999997 899999999999999999999999999986
Q ss_pred cCcccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhh
Q 041479 673 IPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQV 737 (771)
Q Consensus 673 ~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 737 (771)
+.+. .....++||+.||||| ||||+|||+||+.||.|+-...+.+ .+-...+.-..+..
T Consensus 262 ~~~~-----STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAIIw-GVGsNsL~LpvPst 335 (904)
T KOG4721|consen 262 LSDK-----STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAIIW-GVGSNSLHLPVPST 335 (904)
T ss_pred hhhh-----hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchheeEE-eccCCcccccCccc
Confidence 6543 3445688999999999 8999999999999998865444322 11122222334444
Q ss_pred cCccccccCcccChhchhhcCCHHHHHHHHH
Q 041479 738 LDPLFLVGGVQEGEETAEENIKKGQIRESLI 768 (771)
Q Consensus 738 ~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~ 768 (771)
+...++.++.+||+..|..||++++++..|+
T Consensus 336 cP~GfklL~Kqcw~sKpRNRPSFrqil~Hld 366 (904)
T KOG4721|consen 336 CPDGFKLLLKQCWNSKPRNRPSFRQILLHLD 366 (904)
T ss_pred CchHHHHHHHHHHhcCCCCCccHHHHHHHHh
Confidence 5555666677999999999999999999875
No 20
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.2e-35 Score=304.80 Aligned_cols=182 Identities=26% Similarity=0.311 Sum_probs=156.8
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRAL 600 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~l 600 (771)
+.....+|+|.||.||||++..+++.||+|+++... ++......+||.||++++|||||+|.+...+... ..+||
T Consensus 119 feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~---~siYl 195 (560)
T KOG0600|consen 119 FEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLS---GSIYL 195 (560)
T ss_pred HHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCC---ceEEE
Confidence 444556899999999999999999999999997765 5667888999999999999999999999887621 16899
Q ss_pred EEEeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcc
Q 041479 601 VYEFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676 (771)
Q Consensus 601 v~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~ 676 (771)
|+|||++ ||..+ .-.++..++..++.|++.||+|||+. +|+|||||.+|||||.+|.+||+|||+|+++...
T Consensus 196 VFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~ 271 (560)
T KOG0600|consen 196 VFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNILIDNNGVLKIADFGLARFYTPS 271 (560)
T ss_pred EEecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceEEcCCCCEEeccccceeeccCC
Confidence 9999986 66554 33689999999999999999999985 9999999999999999999999999999988765
Q ss_pred cCCcccccccccccccccchh----------------HHHHHHHHHhCCCCCCc
Q 041479 677 MSSNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSD 714 (771)
Q Consensus 677 ~~~~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~ 714 (771)
... ..+..+-|.+|+||| .|||+.||++|++.+.+
T Consensus 272 ~~~---~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G 322 (560)
T KOG0600|consen 272 GSA---PYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQG 322 (560)
T ss_pred CCc---ccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCC
Confidence 432 234567899999999 39999999999998764
No 21
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-35 Score=308.56 Aligned_cols=234 Identities=23% Similarity=0.260 Sum_probs=188.4
Q ss_pred ccccccccccccccceEEEEEecCCCeEEEEEEeecc---chhhHHHHHHHHHHHhcc-CCCCceeEEEEeecCCCCCce
Q 041479 521 KDLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLH---QRGALKSFMAECQALRNI-RHRNLVKIITACSTSDFQGNY 596 (771)
Q Consensus 521 ~~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~ 596 (771)
.++.-...+|+|++++||+|+.+.++++||||++... ++...+...+|-.+|.++ .||.||+|+.-|.+..
T Consensus 73 ~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~----- 147 (604)
T KOG0592|consen 73 NDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEE----- 147 (604)
T ss_pred hhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeeccc-----
Confidence 3444555689999999999999999999999999644 344456778899999999 7999999999877666
Q ss_pred eEEEEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCcccc
Q 041479 597 FRALVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673 (771)
Q Consensus 597 ~~~lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~ 673 (771)
.+|+|+||+++|+|.++ .+.+++.....++.||..||+|||+. |||||||||+|||+|+++++||+|||.|+.+
T Consensus 148 sLYFvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~---GIIHRDlKPENILLd~dmhikITDFGsAK~l 224 (604)
T KOG0592|consen 148 SLYFVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSN---GIIHRDLKPENILLDKDGHIKITDFGSAKIL 224 (604)
T ss_pred ceEEEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeEcCCCcEEEeeccccccC
Confidence 78999999999999776 45788889999999999999999986 9999999999999999999999999999988
Q ss_pred CcccCC---------cccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhh
Q 041479 674 PEVMSS---------NQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMA 729 (771)
Q Consensus 674 ~~~~~~---------~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~ 729 (771)
.+.... .......++||..|.+|| |||++|.|+.|++||.+.. +...+.++....
T Consensus 225 ~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~N-eyliFqkI~~l~ 303 (604)
T KOG0592|consen 225 SPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAAN-EYLIFQKIQALD 303 (604)
T ss_pred ChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCcccc-HHHHHHHHHHhc
Confidence 654322 111125689999999999 7999999999999997642 233455555444
Q ss_pred CCCchhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 730 LPDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 730 ~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
+. +++.+++....+..+.+..||++|+|+.++-+
T Consensus 304 y~--fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~ 337 (604)
T KOG0592|consen 304 YE--FPEGFPEDARDLIKKLLVRDPSDRLTSQQIKA 337 (604)
T ss_pred cc--CCCCCCHHHHHHHHHHHccCccccccHHHHhh
Confidence 42 23333344444555888999999999988764
No 22
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-34 Score=309.37 Aligned_cols=229 Identities=24% Similarity=0.242 Sum_probs=187.0
Q ss_pred ccccccccccccccceEEEEEecCCCeEEEEEEeecc----ch-hhHHHHHHHHHHHhccC-CCCceeEEEEeecCCCCC
Q 041479 521 KDLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLH----QR-GALKSFMAECQALRNIR-HRNLVKIITACSTSDFQG 594 (771)
Q Consensus 521 ~~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~----~~-~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~ 594 (771)
..+...-++|+|.+|+||.|.+..+++.||||++... .. ...+...+|+.++++++ ||||+++++++....
T Consensus 17 g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~--- 93 (370)
T KOG0583|consen 17 GKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT--- 93 (370)
T ss_pred CceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC---
Confidence 3455667899999999999999999999999977553 11 23456678999999999 999999999998877
Q ss_pred ceeEEEEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCC-CceEEecccCc
Q 041479 595 NYFRALVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDND-MTAHMGDFGLT 670 (771)
Q Consensus 595 ~~~~~lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~-~~~kl~DfGla 670 (771)
..|+||||+.||+|.++ ..++.+.+..+++.|++.|++|+|+. +|+||||||+|||++.+ +.+||+|||++
T Consensus 94 --~~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENilld~~~~~~Kl~DFG~s 168 (370)
T KOG0583|consen 94 --KIYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENILLDGNEGNLKLSDFGLS 168 (370)
T ss_pred --eEEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEecCCCCCEEEeccccc
Confidence 68999999999999877 46788999999999999999999985 99999999999999999 99999999999
Q ss_pred cccCcccCCcccccccccccccccchh-----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCc
Q 041479 671 RFIPEVMSSNQCSSVGLKGTVGYATPE-----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQ 733 (771)
Q Consensus 671 ~~~~~~~~~~~~~~~~~~gt~~y~aPE-----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~ 733 (771)
..... ........+||+.|+||| +||++|.|++|+.||++... ......+..+ +..
T Consensus 169 ~~~~~----~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~-~~l~~ki~~~--~~~ 241 (370)
T KOG0583|consen 169 AISPG----EDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNV-PNLYRKIRKG--EFK 241 (370)
T ss_pred cccCC----CCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccH-HHHHHHHhcC--Ccc
Confidence 87631 122334568999999999 59999999999999987211 1112222222 234
Q ss_pred hhhhc-CccccccCcccChhchhhcCCHHHHH
Q 041479 734 ILQVL-DPLFLVGGVQEGEETAEENIKKGQIR 764 (771)
Q Consensus 734 ~~~~~-~~~~~~~~~~cl~~~p~~Rpt~~~vl 764 (771)
++..+ ++.......+|+..||.+|+|+.+++
T Consensus 242 ~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~ 273 (370)
T KOG0583|consen 242 IPSYLLSPEARSLIEKMLVPDPSTRITLLEIL 273 (370)
T ss_pred CCCCcCCHHHHHHHHHHcCCCcccCCCHHHHh
Confidence 44555 77777777799999999999999998
No 23
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=2.9e-37 Score=324.42 Aligned_cols=361 Identities=24% Similarity=0.376 Sum_probs=302.3
Q ss_pred CcEEEEEcCCCCCcc-cCCccccCCCCCcEEEcCCCcccccCCccccCCCCCCEEecccCcCcccCCcccccCCcccccC
Q 041479 44 QRVILLNLSGQNLTG-TASPYIGNLTFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNALQGQIPDSRLILNKLEGNI 122 (771)
Q Consensus 44 ~~l~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~l~~n~l~~~~ 122 (771)
+=|.-+|+|+|.++| ..|.....++.++.|-|...++. .+|++++.+.+|++|.+++|++. .+
T Consensus 7 pFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~---------------~v 70 (1255)
T KOG0444|consen 7 PFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI---------------SV 70 (1255)
T ss_pred ceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH---------------hh
Confidence 456778999999995 67889999999999999999998 59999999999999999999986 44
Q ss_pred CccccCCCCCCEEecccccCc-CCCC-------ccceeeecccccccccCccccCCCCCCEEecccCcCcccCChhhhhC
Q 041479 123 PSELGSLLKFKGLGLANNYFT-GPIP-------HLNMFQVSVYSLTGSIPIQLLNITSMEYFHVSENQLVGELPPHIGFT 194 (771)
Q Consensus 123 p~~~~~l~~L~~L~Ls~N~l~-~~lp-------~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~ 194 (771)
-.+++.|+.|+.+.+.+|++. ..+| .|.++|||+|++. ..|..+..-.++-+|+||+|+|. +||..+|.+
T Consensus 71 hGELs~Lp~LRsv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~Ie-tIPn~lfin 148 (1255)
T KOG0444|consen 71 HGELSDLPRLRSVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIE-TIPNSLFIN 148 (1255)
T ss_pred hhhhccchhhHHHhhhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccc-cCCchHHHh
Confidence 556777778888888888775 2233 3677777777777 67888888889999999999998 899999989
Q ss_pred CCCCcEEEeecCcccccCCccccCCCCCCEEEccccccCCCCCcCcccccCCCCCcEEEccCcccc-ccCChhhhhcccc
Q 041479 195 LPNVRILLLAGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSLS-GTLPNSLANFSSH 273 (771)
Q Consensus 195 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~~ 273 (771)
|..|-.||||+|++. .+|+.+..|..|++|+|++|.+... .+..+..+++|++|++++.+=+ .-+|.++..+. +
T Consensus 149 LtDLLfLDLS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hf---QLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~-N 223 (1255)
T KOG0444|consen 149 LTDLLFLDLSNNRLE-MLPPQIRRLSMLQTLKLSNNPLNHF---QLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLH-N 223 (1255)
T ss_pred hHhHhhhccccchhh-hcCHHHHHHhhhhhhhcCCChhhHH---HHhcCccchhhhhhhcccccchhhcCCCchhhhh-h
Confidence 999999999999998 6777888999999999999988643 2344567788999999887643 25888888886 8
Q ss_pred cceeecccCcCcccCcccccccCCcceEecCCccceeccCccccCCCCCCEEEccCCcccccCCcccccccccccccccC
Q 041479 274 LRYLYMSANPISGSIPTEIGNLKNLIIIAIEKFILIRNIPISVGYLLKLQVLSLFENNISREIPSSLGNFTFLTELNLCG 353 (771)
Q Consensus 274 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 353 (771)
|..+|||.|.+. ..|+.+.++.+|+.|+|++|.++ .+....+...+|++|+||.|+++ .+|.+++.+++|+.|++.+
T Consensus 224 L~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~ 300 (1255)
T KOG0444|consen 224 LRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANN 300 (1255)
T ss_pred hhhccccccCCC-cchHHHhhhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhcc
Confidence 999999999998 88999999999999999999985 35556667788999999999998 7899999999999999999
Q ss_pred ccce-ecCCcccccccce-eeecccCcccCCCCcCCCCCCCCCeEECCCCcccccCCcchhhhhcccccccEEECcCCCC
Q 041479 354 NSIR-GSVPSALGSCHQL-WLDLSHNHLTGPIPLAVGNPKSIPHLDLSKNELSGEIPSSLAWIFGYISIFAKLNLSYNNL 431 (771)
Q Consensus 354 N~l~-~~~p~~~~~l~~l-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~l~~L~~L~Ls~N~l 431 (771)
|+++ .-+|+.++.+..| .+..++|+|. ..|..+..+..|+.|.|++|++- .+|+.+- -++.|+.|||..|+=
T Consensus 301 NkL~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIH----lL~~l~vLDlreNpn 374 (1255)
T KOG0444|consen 301 NKLTFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIH----LLPDLKVLDLRENPN 374 (1255)
T ss_pred CcccccCCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhccccccee-echhhhh----hcCCcceeeccCCcC
Confidence 9886 3478889999888 7888889887 78999999999999999999998 7888765 778899999999864
Q ss_pred CCCCC
Q 041479 432 DGDVP 436 (771)
Q Consensus 432 ~~~~p 436 (771)
--.+|
T Consensus 375 LVMPP 379 (1255)
T KOG0444|consen 375 LVMPP 379 (1255)
T ss_pred ccCCC
Confidence 33334
No 24
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-35 Score=305.75 Aligned_cols=227 Identities=21% Similarity=0.267 Sum_probs=175.4
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeeccchhhHH-HHHHHHHHHhccC-CCCceeEEEEeecCCCCCceeEEEEEEe
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALK-SFMAECQALRNIR-HRNLVKIITACSTSDFQGNYFRALVYEF 604 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~-~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~~~~~~lv~e~ 604 (771)
..+|+|.||.||+|+...+++.||||+++..-....+ .=+||+..+++++ |||||++.+++.+.+. .+|+||||
T Consensus 16 ~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~----~L~fVfE~ 91 (538)
T KOG0661|consen 16 RKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDR----ILYFVFEF 91 (538)
T ss_pred HHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCc----eEeeeHHh
Confidence 4589999999999999999999999999765433322 2368999999999 9999999999877652 68999999
Q ss_pred ccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCc
Q 041479 605 MHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSN 680 (771)
Q Consensus 605 ~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 680 (771)
|+. +|.+. .+.+++..+..|+.||++||+|+|.+ |++|||+||+|||+.....+||+|||+||.+.....
T Consensus 92 Md~-NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~~iKiaDFGLARev~SkpP-- 165 (538)
T KOG0661|consen 92 MDC-NLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGNDVIKIADFGLAREVRSKPP-- 165 (538)
T ss_pred hhh-hHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecccceeEecccccccccccCCC--
Confidence 975 77655 56799999999999999999999986 999999999999999888999999999997655433
Q ss_pred ccccccccccccccchh----------------HHHHHHHHHhCCCCCCcc--------------------ccCCccHHH
Q 041479 681 QCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDM--------------------FTEGLDLHN 724 (771)
Q Consensus 681 ~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~--------------------~~~~~~~~~ 724 (771)
-+..+.|++|+||| +||+++|+.+-++-|.+. |..+..++.
T Consensus 166 ---YTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~ 242 (538)
T KOG0661|consen 166 ---YTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLAS 242 (538)
T ss_pred ---cchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHH
Confidence 23467899999999 599999999988866542 222222222
Q ss_pred HHHhhCC----CchhhhcCc---cccccCcccChhchhhcCCHHHHHHH
Q 041479 725 FVKMALP----DQILQVLDP---LFLVGGVQEGEETAEENIKKGQIRES 766 (771)
Q Consensus 725 ~~~~~~~----~~~~~~~~~---~~~~~~~~cl~~~p~~Rpt~~~vl~~ 766 (771)
...-.+| ..+.+.+.. +....+.+|+.+||++|||+.++++.
T Consensus 243 ~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 243 AMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred HhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 2222222 122222222 12233449999999999999998863
No 25
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=1.4e-34 Score=277.21 Aligned_cols=229 Identities=24% Similarity=0.285 Sum_probs=176.9
Q ss_pred ccccccccccceEEEEEecCCCeEEEEEEeeccch--hhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEE
Q 041479 525 LNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQR--GALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
....+|+|.+|+||+|++..+++.||||+++.++. +......|||+.++.++||||+.++++|...+ ..-+|+
T Consensus 6 ~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~-----~l~lVf 80 (318)
T KOG0659|consen 6 KLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKS-----NLSLVF 80 (318)
T ss_pred hhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCC-----ceEEEE
Confidence 34568999999999999999999999999987753 33567899999999999999999999987766 578999
Q ss_pred EeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccC
Q 041479 603 EFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMS 678 (771)
Q Consensus 603 e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 678 (771)
|||+. +|+.. ...++..++..++.++.+|++|||+. .|+|||+||.|+|++++|.+||+|||+|+.+.....
T Consensus 81 Efm~t-dLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~ 156 (318)
T KOG0659|consen 81 EFMPT-DLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNR 156 (318)
T ss_pred Eeccc-cHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccceEEcCCCcEEeecccchhccCCCCc
Confidence 99975 77655 44688999999999999999999986 899999999999999999999999999998876544
Q ss_pred Ccccccccccccccccchh----------------HHHHHHHHHhCCCCCCc--------------------cccCCccH
Q 041479 679 SNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSD--------------------MFTEGLDL 722 (771)
Q Consensus 679 ~~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~--------------------~~~~~~~~ 722 (771)
...+ .+-|.+|+||| .||++.||+-|.+-|.+ .|++-..+
T Consensus 157 ~~~~----~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~l 232 (318)
T KOG0659|consen 157 IQTH----QVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSL 232 (318)
T ss_pred cccc----ceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCcccccc
Confidence 3222 26799999999 39999999999764432 23332333
Q ss_pred HHHHHhh-CCCchhh-hc---CccccccCcccChhchhhcCCHHHHHHH
Q 041479 723 HNFVKMA-LPDQILQ-VL---DPLFLVGGVQEGEETAEENIKKGQIRES 766 (771)
Q Consensus 723 ~~~~~~~-~~~~~~~-~~---~~~~~~~~~~cl~~~p~~Rpt~~~vl~~ 766 (771)
.++++-. +|..... .+ .....+...+++..||.+|+|+.|++++
T Consensus 233 pdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 233 PDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred ccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 3333222 2211111 11 1111133448999999999999999853
No 26
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-34 Score=281.79 Aligned_cols=222 Identities=23% Similarity=0.206 Sum_probs=184.3
Q ss_pred cccccccccccccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCC
Q 041479 518 SSRKDLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQG 594 (771)
Q Consensus 518 ~~~~~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 594 (771)
...+++...-++|.|+||+|..++.+.++..||+|++...+ .++.+....|..+++.+.||.+|++++.+.+.+
T Consensus 41 ~~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~--- 117 (355)
T KOG0616|consen 41 YSLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNS--- 117 (355)
T ss_pred cchhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCC---
Confidence 44567788889999999999999999999999999997664 456677889999999999999999999988877
Q ss_pred ceeEEEEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCcc
Q 041479 595 NYFRALVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTR 671 (771)
Q Consensus 595 ~~~~~lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~ 671 (771)
..||||||++||.|..+ .+++++..+..++.||+.|++|||+. +|++||+||+|||+|.+|.+||+|||.|+
T Consensus 118 --~lymvmeyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiLlD~~G~iKitDFGFAK 192 (355)
T KOG0616|consen 118 --NLYMVMEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLLLDQNGHIKITDFGFAK 192 (355)
T ss_pred --eEEEEEeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHeeeccCCcEEEEeccceE
Confidence 78999999999999877 45799999999999999999999985 99999999999999999999999999999
Q ss_pred ccCcccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhh
Q 041479 672 FIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQ 736 (771)
Q Consensus 672 ~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 736 (771)
.+... ..+.||||-|+||| |||++|||+.|.+||.+.... ....+++.+.+. .+.
T Consensus 193 ~v~~r-------T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~-~iY~KI~~~~v~--fP~ 262 (355)
T KOG0616|consen 193 RVSGR-------TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPI-QIYEKILEGKVK--FPS 262 (355)
T ss_pred EecCc-------EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChH-HHHHHHHhCccc--CCc
Confidence 76543 23468999999999 799999999999999764332 224445555443 334
Q ss_pred hcCccccccCcccChhchhhc
Q 041479 737 VLDPLFLVGGVQEGEETAEEN 757 (771)
Q Consensus 737 ~~~~~~~~~~~~cl~~~p~~R 757 (771)
.+++..+....+.++.|-++|
T Consensus 263 ~fs~~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 263 YFSSDAKDLLKKLLQVDLTKR 283 (355)
T ss_pred ccCHHHHHHHHHHHhhhhHhh
Confidence 445555444456667777777
No 27
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-34 Score=296.05 Aligned_cols=236 Identities=25% Similarity=0.279 Sum_probs=185.3
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccc--------------hhhHHHHHHHHHHHhccCCCCceeEEEEee
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--------------RGALKSFMAECQALRNIRHRNLVKIITACS 588 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--------------~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~ 588 (771)
+.....+|.|.+|.|-+|+...+++.||||++.... ....++..+||.+|++++|||||+|+++-.
T Consensus 99 y~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiEvLD 178 (576)
T KOG0585|consen 99 YELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIEVLD 178 (576)
T ss_pred eehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEEeec
Confidence 445567899999999999999999999999995432 112368899999999999999999999976
Q ss_pred cCCCCCceeEEEEEEeccCCCCCCC--ccc-CCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEe
Q 041479 589 TSDFQGNYFRALVYEFMHHGSLESC--PRI-LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMG 665 (771)
Q Consensus 589 ~~~~~~~~~~~lv~e~~~~g~L~~~--~~~-l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~ 665 (771)
+.... ..|||+|||..|.+... .+. ++..++.+|+.++..||+|||.| +||||||||+|+|++++|.+||+
T Consensus 179 DP~s~---~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~Q---giiHRDIKPsNLLl~~~g~VKIs 252 (576)
T KOG0585|consen 179 DPESD---KLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQ---GIIHRDIKPSNLLLSSDGTVKIS 252 (576)
T ss_pred CcccC---ceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEEcCCCcEEee
Confidence 65433 78999999999999766 334 88999999999999999999998 99999999999999999999999
Q ss_pred cccCccccCcccCC-cccccccccccccccchh-------------------HHHHHHHHHhCCCCCCccccCCccHHHH
Q 041479 666 DFGLTRFIPEVMSS-NQCSSVGLKGTVGYATPE-------------------YGILLLEIFTGKRPTSDMFTEGLDLHNF 725 (771)
Q Consensus 666 DfGla~~~~~~~~~-~~~~~~~~~gt~~y~aPE-------------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~ 725 (771)
|||.+......... ........+|||.||||| +||++|-++.|+.||-+.+-.. .+.++
T Consensus 253 DFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~-l~~KI 331 (576)
T KOG0585|consen 253 DFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELE-LFDKI 331 (576)
T ss_pred ccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHH-HHHHH
Confidence 99999865333111 111122357999999999 5999999999999997642211 13333
Q ss_pred HHhhCCCchhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 726 VKMALPDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 726 ~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
+...+..+....+.+..+.+..++|.+||.+|.++.+|..
T Consensus 332 vn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~ 371 (576)
T KOG0585|consen 332 VNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKL 371 (576)
T ss_pred hcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhhee
Confidence 3333333333344555666677999999999999998753
No 28
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=4.1e-34 Score=309.21 Aligned_cols=237 Identities=22% Similarity=0.261 Sum_probs=182.0
Q ss_pred ccccccccccceEEEEEec-----CCCeEEEEEEeeccc-hhhHHHHHHHHHHHhcc-CCCCceeEEEEeecCCCCCcee
Q 041479 525 LNVSYESLVKATVYKGILD-----LDQTFIAVKVLFLHQ-RGALKSFMAECQALRNI-RHRNLVKIITACSTSDFQGNYF 597 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~-----~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~~ 597 (771)
..-.+|+|++|+||+|.+. .+++.||||++.... ....+.+.+|+.++..+ +|||||+++++|...+. .
T Consensus 11 ~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~----~ 86 (338)
T cd05102 11 LGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNG----P 86 (338)
T ss_pred eeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCC----c
Confidence 3455899999999999752 334589999996543 33456799999999999 89999999999865431 5
Q ss_pred EEEEEEeccCCCCCCCc---------------------------------------------------------------
Q 041479 598 RALVYEFMHHGSLESCP--------------------------------------------------------------- 614 (771)
Q Consensus 598 ~~lv~e~~~~g~L~~~~--------------------------------------------------------------- 614 (771)
.++||||+++|+|.++.
T Consensus 87 ~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (338)
T cd05102 87 LMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDL 166 (338)
T ss_pred eEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcccc
Confidence 78999999999985431
Q ss_pred --ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCccccccccccccc
Q 041479 615 --RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVG 692 (771)
Q Consensus 615 --~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~ 692 (771)
..+++.+...++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....... ........+++.
T Consensus 167 ~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~--~~~~~~~~~~~~ 241 (338)
T cd05102 167 WKSPLTMEDLICYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD--YVRKGSARLPLK 241 (338)
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCccceEEEcCCCcEEEeecccccccccCcc--hhcccCCCCCcc
Confidence 2367778899999999999999985 999999999999999999999999999986533221 111122346788
Q ss_pred ccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhhhcCccccccCcccChhchhh
Q 041479 693 YATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFLVGGVQEGEETAEE 756 (771)
Q Consensus 693 y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~ 756 (771)
||||| |||++|||++ |..||.+.... ..+............+..+++.+...+.+||+.||++
T Consensus 242 y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~ 320 (338)
T cd05102 242 WMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIN-EEFCQRLKDGTRMRAPENATPEIYRIMLACWQGDPKE 320 (338)
T ss_pred ccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCcc-HHHHHHHhcCCCCCCCCCCCHHHHHHHHHHccCChhh
Confidence 99999 6999999997 99999764222 1222333322233334455666667778999999999
Q ss_pred cCCHHHHHHHHHHhC
Q 041479 757 NIKKGQIRESLIAIL 771 (771)
Q Consensus 757 Rpt~~~vl~~L~~~l 771 (771)
|||+.|+++.|++++
T Consensus 321 RPs~~el~~~l~~~~ 335 (338)
T cd05102 321 RPTFSALVEILGDLL 335 (338)
T ss_pred CcCHHHHHHHHHHHH
Confidence 999999999999874
No 29
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=7.1e-35 Score=308.20 Aligned_cols=235 Identities=26% Similarity=0.346 Sum_probs=187.9
Q ss_pred cccccccccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEE
Q 041479 522 DLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRA 599 (771)
Q Consensus 522 ~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 599 (771)
.......+|+|.||+||+|+|- | .||||++.... ....+.|..|+.++++-||.||+=+.|||.... . .
T Consensus 393 ev~l~~rIGsGsFGtV~Rg~wh--G-dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~-----~-A 463 (678)
T KOG0193|consen 393 EVLLGERIGSGSFGTVYRGRWH--G-DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPP-----L-A 463 (678)
T ss_pred Hhhccceeccccccceeecccc--c-ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCc-----e-e
Confidence 3445567899999999999995 4 69999997664 456789999999999999999999999998876 3 8
Q ss_pred EEEEeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCc
Q 041479 600 LVYEFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPE 675 (771)
Q Consensus 600 lv~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~ 675 (771)
||..+|+|.+|+.+ ...++..+...|+.|||+|+.|||. ++|||||||..||++.++++|||+|||++..-..
T Consensus 464 IiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHA---K~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~ 540 (678)
T KOG0193|consen 464 IITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHA---KNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTR 540 (678)
T ss_pred eeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhh---hhhhhhhccccceEEccCCcEEEecccceeeeee
Confidence 99999999999877 4468888999999999999999998 4999999999999999999999999999864321
Q ss_pred ccCCcccccccccccccccchh------------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCC---ch
Q 041479 676 VMSSNQCSSVGLKGTVGYATPE------------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPD---QI 734 (771)
Q Consensus 676 ~~~~~~~~~~~~~gt~~y~aPE------------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~---~~ 734 (771)
.. .........|..-||||| ||+|+|||+||..||... ..+..+...-+++... ..
T Consensus 541 w~--g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~-~~dqIifmVGrG~l~pd~s~~ 617 (678)
T KOG0193|consen 541 WS--GEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQ-NRDQIIFMVGRGYLMPDLSKI 617 (678)
T ss_pred ec--cccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCC-ChhheEEEecccccCccchhh
Confidence 10 011122345888999999 799999999999999843 3333344444443332 22
Q ss_pred hhhcCccccccCcccChhchhhcCCHHHHHHHHHHhC
Q 041479 735 LQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAIL 771 (771)
Q Consensus 735 ~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~l 771 (771)
.......++.+...||..++++||...+++..|++++
T Consensus 618 ~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~ 654 (678)
T KOG0193|consen 618 RSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELL 654 (678)
T ss_pred hccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhh
Confidence 3333345666677999999999999999999998864
No 30
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=9.4e-35 Score=303.36 Aligned_cols=221 Identities=26% Similarity=0.324 Sum_probs=182.5
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEe
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEF 604 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~ 604 (771)
..+|+|.+|+||||+-+.+.+.||+|.+.... ++..+...+|++++++++|||||.+++.|++.. +.|+|.||
T Consensus 8 e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~-----~~~vVte~ 82 (808)
T KOG0597|consen 8 EMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSA-----HLWVVTEY 82 (808)
T ss_pred HHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccc-----eEEEEehh
Confidence 45799999999999999999999999996543 456788999999999999999999999988876 88999999
Q ss_pred ccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCcc
Q 041479 605 MHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQ 681 (771)
Q Consensus 605 ~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 681 (771)
|.| +|..+ .+.+++..+..++.++..||.|||+. +|+|||+||.|||++..+.+|+||||+|+.+... .
T Consensus 83 a~g-~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~----t 154 (808)
T KOG0597|consen 83 AVG-DLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNILLEKGGTLKLCDFGLARAMSTN----T 154 (808)
T ss_pred hhh-hHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceeeecCCCceeechhhhhhhcccC----c
Confidence 977 98766 45799999999999999999999996 9999999999999999999999999999976653 3
Q ss_pred cccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCC--CchhhhcCccccc
Q 041479 682 CSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALP--DQILQVLDPLFLV 744 (771)
Q Consensus 682 ~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 744 (771)
...+...|||.||||| +||++||+++|++||... .+.+.++.-.. ...+...++.+..
T Consensus 155 ~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~-----si~~Lv~~I~~d~v~~p~~~S~~f~n 229 (808)
T KOG0597|consen 155 SVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYAR-----SITQLVKSILKDPVKPPSTASSSFVN 229 (808)
T ss_pred eeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHH-----HHHHHHHHHhcCCCCCcccccHHHHH
Confidence 3345567999999999 599999999999999531 23444433332 2223344555555
Q ss_pred cCcccChhchhhcCCHHHHHH
Q 041479 745 GGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 745 ~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
.....+.+||.+|.|-.+++.
T Consensus 230 fl~gLL~kdP~~RltW~~Ll~ 250 (808)
T KOG0597|consen 230 FLQGLLIKDPAQRLTWTDLLG 250 (808)
T ss_pred HHHHHhhcChhhcccHHHHhc
Confidence 555778999999999877763
No 31
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=2.8e-37 Score=310.33 Aligned_cols=226 Identities=27% Similarity=0.417 Sum_probs=141.3
Q ss_pred CcEEEEEcCCCCCcccCCccccCCCCCcEEEcCCCcccccCCccccCCCCCCEEecccCcCcccCCcc---------ccc
Q 041479 44 QRVILLNLSGQNLTGTASPYIGNLTFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNALQGQIPDS---------RLI 114 (771)
Q Consensus 44 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~---------~l~ 114 (771)
..+++|++++|+++ ..|++++.+..++.|+.|+|+++ .+|.+++++.+|..|+.++|.+....++. ...
T Consensus 68 ~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~n~~~el~~~i~~~~~l~dl~~~ 145 (565)
T KOG0472|consen 68 ACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCSSNELKELPDSIGRLLDLEDLDAT 145 (565)
T ss_pred cceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhccccceeecCchHHHHhhhhhhhcc
Confidence 45777888888887 67778888888888888888887 57888888888888888888876322221 122
Q ss_pred CCcccccCCccccCCCCCCEEecccccCcCCCCc------cceeeecccccccccCccccCCCCCCEEecccCcCcccCC
Q 041479 115 LNKLEGNIPSELGSLLKFKGLGLANNYFTGPIPH------LNMFQVSVYSLTGSIPIQLLNITSMEYFHVSENQLVGELP 188 (771)
Q Consensus 115 ~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~------L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp 188 (771)
.|+++ ..|+.+.++.+|..|++.+|+++...|. |+.+|...|-+. .+|..++.+.+|+.|+|..|+|. .+|
T Consensus 146 ~N~i~-slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~~Nki~-~lP 222 (565)
T KOG0472|consen 146 NNQIS-SLPEDMVNLSKLSKLDLEGNKLKALPENHIAMKRLKHLDCNSNLLE-TLPPELGGLESLELLYLRRNKIR-FLP 222 (565)
T ss_pred ccccc-cCchHHHHHHHHHHhhccccchhhCCHHHHHHHHHHhcccchhhhh-cCChhhcchhhhHHHHhhhcccc-cCC
Confidence 33443 4566666666666666666666644432 555555555544 55666666666666666666665 565
Q ss_pred hhhhhCCCCCcEEEeecCcccccCCcccc-CCCCCCEEEccccccCCCCCcCcccccCCCCCcEEEccCccccccCChhh
Q 041479 189 PHIGFTLPNVRILLLAGNQFFGNIPHSIS-NASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSLSGTLPNSL 267 (771)
Q Consensus 189 ~~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~ 267 (771)
++. ++..|..|+++.|+|. .+|.... ++++|.+|||..|+++.. |+.+ .-+.+|+.||+|+|.|+ .+|.++
T Consensus 223 -ef~-gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklke~-Pde~---clLrsL~rLDlSNN~is-~Lp~sL 294 (565)
T KOG0472|consen 223 -EFP-GCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLKEV-PDEI---CLLRSLERLDLSNNDIS-SLPYSL 294 (565)
T ss_pred -CCC-ccHHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccccC-chHH---HHhhhhhhhcccCCccc-cCCccc
Confidence 333 5556666666666665 3444433 666666666666666633 3333 45566666666666666 566666
Q ss_pred hhcccccceeecccCcC
Q 041479 268 ANFSSHLRYLYMSANPI 284 (771)
Q Consensus 268 ~~l~~~L~~L~Ls~N~l 284 (771)
+++ +|+.|-+-+|.+
T Consensus 295 gnl--hL~~L~leGNPl 309 (565)
T KOG0472|consen 295 GNL--HLKFLALEGNPL 309 (565)
T ss_pred ccc--eeeehhhcCCch
Confidence 665 355555555554
No 32
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2e-34 Score=309.17 Aligned_cols=234 Identities=26% Similarity=0.355 Sum_probs=188.9
Q ss_pred ccccccccccccceEEEEEecCCCe---E-EEEEEeecc---chhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCc
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQT---F-IAVKVLFLH---QRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGN 595 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~---~-vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~ 595 (771)
......+|+|.||.||+|+++..+. . ||||..... .....++|++|+++|++++|||||+++|++....
T Consensus 159 v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~---- 234 (474)
T KOG0194|consen 159 IELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEE---- 234 (474)
T ss_pred ccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCC----
Confidence 3344789999999999999987532 3 899999752 3567889999999999999999999999998876
Q ss_pred eeEEEEEEeccCCCCCCCc----ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCcc
Q 041479 596 YFRALVYEFMHHGSLESCP----RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTR 671 (771)
Q Consensus 596 ~~~~lv~e~~~~g~L~~~~----~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~ 671 (771)
.+|+|||+|+||+|.++. ..++..++..++.++|+||+|||+. +++||||.++|+|++.++.+||+|||+++
T Consensus 235 -Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k---~~IHRDIAARNcL~~~~~~vKISDFGLs~ 310 (474)
T KOG0194|consen 235 -PLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSK---NCIHRDIAARNCLYSKKGVVKISDFGLSR 310 (474)
T ss_pred -ccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHC---CCcchhHhHHHheecCCCeEEeCcccccc
Confidence 579999999999998882 2488999999999999999999985 89999999999999999999999999988
Q ss_pred ccCcccCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHH-HhhCCCch
Q 041479 672 FIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFV-KMALPDQI 734 (771)
Q Consensus 672 ~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~-~~~~~~~~ 734 (771)
.-.... .. .....-...|+||| |||++||+++ |..||.+... .....++ ...++-..
T Consensus 311 ~~~~~~---~~-~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~--~~v~~kI~~~~~r~~~ 384 (474)
T KOG0194|consen 311 AGSQYV---MK-KFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKN--YEVKAKIVKNGYRMPI 384 (474)
T ss_pred CCccee---ec-cccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCH--HHHHHHHHhcCccCCC
Confidence 543111 10 10112467899999 7999999999 8999987532 2344444 55665555
Q ss_pred hhhcCccccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 735 LQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 735 ~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
+......+...+.+||..+|++||||.++.+.++.+
T Consensus 385 ~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~ 420 (474)
T KOG0194|consen 385 PSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEAL 420 (474)
T ss_pred CCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHH
Confidence 555455555666799999999999999999999875
No 33
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-35 Score=277.89 Aligned_cols=245 Identities=17% Similarity=0.178 Sum_probs=200.7
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEec
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFM 605 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~~ 605 (771)
+..+|+|+++.||.++.-.+++.||+|++.....++.+..++|++..++++||||+++++++..+...+....|++++|.
T Consensus 26 ~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~yll~Pyy 105 (302)
T KOG2345|consen 26 QRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAYLLLPYY 105 (302)
T ss_pred eeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEEEEeehh
Confidence 44589999999999998888899999999888878889999999999999999999999998776666677899999999
Q ss_pred cCCCCCCC-------cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccC
Q 041479 606 HHGSLESC-------PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMS 678 (771)
Q Consensus 606 ~~g~L~~~-------~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 678 (771)
..|+|.+. +..+++.+.+.|+.++++||++||+. .++.+||||||.|||+.+.+.+++.|||.+....-...
T Consensus 106 ~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a~i~i~ 184 (302)
T KOG2345|consen 106 KRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLGSATQAPIQIE 184 (302)
T ss_pred ccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEeccCccccceEee
Confidence 99998665 34689999999999999999999997 45799999999999999999999999999886543221
Q ss_pred C-----cccccccccccccccchh------------------HHHHHHHHHhCCCCCCccccCCccHHHHHH-hhCCCch
Q 041479 679 S-----NQCSSVGLKGTVGYATPE------------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVK-MALPDQI 734 (771)
Q Consensus 679 ~-----~~~~~~~~~gt~~y~aPE------------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~-~~~~~~~ 734 (771)
. ..........|..|+||| +||++|+|+.|..||+.++..|..+.-.+. +.+..+-
T Consensus 185 ~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLAv~n~q~s~P~ 264 (302)
T KOG2345|consen 185 GSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALAVQNAQISIPN 264 (302)
T ss_pred chHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEeeeccccccCC
Confidence 1 111223445789999999 699999999999999877766554432222 2332222
Q ss_pred hhhcCccccccCcccChhchhhcCCHHHHHHHHHHhC
Q 041479 735 LQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAIL 771 (771)
Q Consensus 735 ~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~l 771 (771)
....+..+......|++.||.+||++.+++..+++++
T Consensus 265 ~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 265 SSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred CCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 3336666667777999999999999999999999874
No 34
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=1.1e-33 Score=297.35 Aligned_cols=231 Identities=18% Similarity=0.170 Sum_probs=182.2
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeeccch---hhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEE
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLHQR---GALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYE 603 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e 603 (771)
..+++|.++.||+|.+ +++.||||++..... ...+.|.+|++++++++|||||+++|++.+.. .+....++|||
T Consensus 26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~-~~~~~~~lv~E 102 (283)
T PHA02988 26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIV-DDLPRLSLILE 102 (283)
T ss_pred eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecc-cCCCceEEEEE
Confidence 5678999999999988 466999999965432 22578889999999999999999999987621 11125789999
Q ss_pred eccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCc
Q 041479 604 FMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSN 680 (771)
Q Consensus 604 ~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 680 (771)
|+++|+|.++ .+.+++....+++.+++.|++|+|+. .+++||||||+||++++++.+||+|||+++......
T Consensus 103 y~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~--~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~--- 177 (283)
T PHA02988 103 YCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKY--TNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPP--- 177 (283)
T ss_pred eCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhc--CCCCCCcCChhhEEECCCCcEEEcccchHhhhcccc---
Confidence 9999999876 34688999999999999999999973 278899999999999999999999999998654321
Q ss_pred ccccccccccccccchh-----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCcccc
Q 041479 681 QCSSVGLKGTVGYATPE-----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFL 743 (771)
Q Consensus 681 ~~~~~~~~gt~~y~aPE-----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 743 (771)
....|++.|+||| |||++|||++|+.||.+..... ....+.....+...+...++.+.
T Consensus 178 ----~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~l~ 252 (283)
T PHA02988 178 ----FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKE-IYDLIINKNNSLKLPLDCPLEIK 252 (283)
T ss_pred ----ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHhcCCCCCCCCcCcHHHH
Confidence 1235889999999 6999999999999997642211 12222223333333334566676
Q ss_pred ccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 744 VGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 744 ~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
..+.+||+.||++|||+.|+++.|+++
T Consensus 253 ~li~~cl~~dp~~Rps~~ell~~l~~~ 279 (283)
T PHA02988 253 CIVEACTSHDSIKRPNIKEILYNLSLY 279 (283)
T ss_pred HHHHHHhcCCcccCcCHHHHHHHHHHH
Confidence 777899999999999999999999864
No 35
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.4e-34 Score=303.91 Aligned_cols=230 Identities=19% Similarity=0.191 Sum_probs=190.8
Q ss_pred cccccccccccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCce
Q 041479 520 RKDLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNY 596 (771)
Q Consensus 520 ~~~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~ 596 (771)
.+.|....++|.|..|.|..|++..+|+.+|||++.... ......+.+||.+|+-+.||||++++++|++..
T Consensus 11 iGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~----- 85 (786)
T KOG0588|consen 11 IGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQ----- 85 (786)
T ss_pred ccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCc-----
Confidence 456777889999999999999999999999999996552 233567889999999999999999999998876
Q ss_pred eEEEEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCcccc
Q 041479 597 FRALVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673 (771)
Q Consensus 597 ~~~lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~ 673 (771)
++|+|.||+++|.|+++ .+.+++.++.+++.||..|+.|+|.. +|+|||+||+|+|+|..+.+||+|||+|...
T Consensus 86 ~lylvlEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd~~~nIKIADFGMAsLe 162 (786)
T KOG0588|consen 86 HLYLVLEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLDVKNNIKIADFGMASLE 162 (786)
T ss_pred eEEEEEEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhhcccCEeeeccceeecc
Confidence 88999999999999988 56799999999999999999999996 8999999999999999999999999999864
Q ss_pred CcccCCcccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhh
Q 041479 674 PEVMSSNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQV 737 (771)
Q Consensus 674 ~~~~~~~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 737 (771)
.+.. -..+.||+|.|.||| .|||+|.++||+.||+|-.- ...+.++..+. .+.+..
T Consensus 163 ~~gk-----lLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDdNi-r~LLlKV~~G~--f~MPs~ 234 (786)
T KOG0588|consen 163 VPGK-----LLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDDNI-RVLLLKVQRGV--FEMPSN 234 (786)
T ss_pred cCCc-----cccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCccH-HHHHHHHHcCc--ccCCCc
Confidence 4322 223468999999999 49999999999999986211 11122222222 344566
Q ss_pred cCccccccCcccChhchhhcCCHHHHHH
Q 041479 738 LDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 738 ~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
+.++..++..+|+..||++|.|+.||.+
T Consensus 235 Is~eaQdLLr~ml~VDp~~RiT~~eI~k 262 (786)
T KOG0588|consen 235 ISSEAQDLLRRMLDVDPSTRITTEEILK 262 (786)
T ss_pred CCHHHHHHHHHHhccCccccccHHHHhh
Confidence 6666666666999999999999999985
No 36
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.1e-33 Score=278.94 Aligned_cols=183 Identities=25% Similarity=0.299 Sum_probs=155.7
Q ss_pred ccccccccccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeE
Q 041479 521 KDLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFR 598 (771)
Q Consensus 521 ~~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 598 (771)
..+.....+++|.+|.||+|+++.+++.||+|+++... .+..-..+|||.++.+++|||||.+..+....+.. .+
T Consensus 76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d---~i 152 (419)
T KOG0663|consen 76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMD---KI 152 (419)
T ss_pred HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccc---ee
Confidence 34555667899999999999999999999999997765 34455678999999999999999999998776644 57
Q ss_pred EEEEEeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccC
Q 041479 599 ALVYEFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIP 674 (771)
Q Consensus 599 ~lv~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~ 674 (771)
|||||||++ ||... .+++...++..++.|+++|++|||.. .|+|||+|++|+|+.+.|.+||+|||+||.++
T Consensus 153 y~VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLLm~~~G~lKiaDFGLAR~yg 228 (419)
T KOG0663|consen 153 YIVMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLLLSHKGILKIADFGLAREYG 228 (419)
T ss_pred eeeHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhheeeccCCcEEecccchhhhhc
Confidence 999999986 66544 56788999999999999999999986 89999999999999999999999999999876
Q ss_pred cccCCcccccccccccccccchh----------------HHHHHHHHHhCCCCCCc
Q 041479 675 EVMSSNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSD 714 (771)
Q Consensus 675 ~~~~~~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~ 714 (771)
.... ..+..+-|.+|+||| +|||+.|++++++-|.+
T Consensus 229 sp~k----~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G 280 (419)
T KOG0663|consen 229 SPLK----PYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPG 280 (419)
T ss_pred CCcc----cCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCC
Confidence 5432 223456799999999 59999999999886643
No 37
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.9e-35 Score=298.56 Aligned_cols=225 Identities=20% Similarity=0.273 Sum_probs=190.6
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeeccc-hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEec
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFM 605 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~~ 605 (771)
.-+|.|.||.||||.+..+++.||+|++.... +...++..+|+.++.+++|+||.++||.|..+. .++++||||
T Consensus 19 ~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~-----~LwiiMey~ 93 (467)
T KOG0201|consen 19 ELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGT-----KLWIIMEYC 93 (467)
T ss_pred hhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecc-----cHHHHHHHh
Confidence 45799999999999999999999999998764 456789999999999999999999999998877 789999999
Q ss_pred cCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCccc
Q 041479 606 HHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQC 682 (771)
Q Consensus 606 ~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 682 (771)
.||++.+. ...+++.++.-|..++..|+.|+|++ +.+|||||+.||++..+|.+|++|||++..+.....
T Consensus 94 ~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~---- 166 (467)
T KOG0201|consen 94 GGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVK---- 166 (467)
T ss_pred cCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhc---ceecccccccceeEeccCcEEEEecceeeeeechhh----
Confidence 99998776 33347777888899999999999997 899999999999999999999999999987654332
Q ss_pred ccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCccccccCc
Q 041479 683 SSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFLVGGV 747 (771)
Q Consensus 683 ~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 747 (771)
...+++||++||||| +|++.+||++|.+|+.+..+... + .......|+.....+++.+++.+.
T Consensus 167 rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrv-l-flIpk~~PP~L~~~~S~~~kEFV~ 244 (467)
T KOG0201|consen 167 RRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRV-L-FLIPKSAPPRLDGDFSPPFKEFVE 244 (467)
T ss_pred ccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceE-E-EeccCCCCCccccccCHHHHHHHH
Confidence 235689999999999 69999999999999998776432 1 112223344455567777888888
Q ss_pred ccChhchhhcCCHHHHHH
Q 041479 748 QEGEETAEENIKKGQIRE 765 (771)
Q Consensus 748 ~cl~~~p~~Rpt~~~vl~ 765 (771)
.|+.+||+.||++.++++
T Consensus 245 ~CL~k~P~~RpsA~~LLK 262 (467)
T KOG0201|consen 245 ACLDKNPEFRPSAKELLK 262 (467)
T ss_pred HHhhcCcccCcCHHHHhh
Confidence 999999999999999985
No 38
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-33 Score=322.18 Aligned_cols=233 Identities=27% Similarity=0.305 Sum_probs=187.2
Q ss_pred cccccccccceEEEEEecCCC-----eEEEEEEeecc-chhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEE
Q 041479 526 NVSYESLVKATVYKGILDLDQ-----TFIAVKVLFLH-QRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRA 599 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~-----~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 599 (771)
.-.+|.|.||.||+|+..+-. ..||||.+... +.+...+|++|+.+|++++|||||+++|+|.+.. ..+
T Consensus 697 ~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~-----~~~ 771 (1025)
T KOG1095|consen 697 LRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSG-----PPL 771 (1025)
T ss_pred eeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCC-----CcE
Confidence 456899999999999987643 34999999654 4567789999999999999999999999999866 579
Q ss_pred EEEEeccCCCCCCC----------cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccC
Q 041479 600 LVYEFMHHGSLESC----------PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGL 669 (771)
Q Consensus 600 lv~e~~~~g~L~~~----------~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl 669 (771)
|++|||++|||..+ ...+...+.+.++.|||+|+.||+++ ++|||||.++|+|++.+..+||+|||+
T Consensus 772 i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDLAaRNCLL~~~r~VKIaDFGl 848 (1025)
T KOG1095|consen 772 ILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDLAARNCLLDERRVVKIADFGL 848 (1025)
T ss_pred EEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcchhhhheeecccCcEEEcccch
Confidence 99999999999776 23477888999999999999999986 899999999999999999999999999
Q ss_pred ccccCcccCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCc
Q 041479 670 TRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQ 733 (771)
Q Consensus 670 a~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~ 733 (771)
|+.+.....+..... ..-...||||| |||++||++| |..||.+.....+ +..+..+. +-+
T Consensus 849 ArDiy~~~yyr~~~~--a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v-~~~~~~gg-RL~ 924 (1025)
T KOG1095|consen 849 ARDIYDKDYYRKHGE--AMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEV-LLDVLEGG-RLD 924 (1025)
T ss_pred hHhhhhchheeccCc--cccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHH-HHHHHhCC-ccC
Confidence 995544332222111 12346899999 8999999999 9999987643332 33344444 433
Q ss_pred hhhhcCccccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 734 ILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 734 ~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
.+..+...+..++..||+.+|++||+++++++++..+
T Consensus 925 ~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i 961 (1025)
T KOG1095|consen 925 PPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAI 961 (1025)
T ss_pred CCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhh
Confidence 3444444555778899999999999999999988876
No 39
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=5.5e-33 Score=303.89 Aligned_cols=237 Identities=22% Similarity=0.244 Sum_probs=184.7
Q ss_pred cccccccccccceEEEEEe-----cCCCeEEEEEEeeccc-hhhHHHHHHHHHHHhcc-CCCCceeEEEEeecCCCCCce
Q 041479 524 LLNVSYESLVKATVYKGIL-----DLDQTFIAVKVLFLHQ-RGALKSFMAECQALRNI-RHRNLVKIITACSTSDFQGNY 596 (771)
Q Consensus 524 ~~~~~l~~~~~~~Vy~~~~-----~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~ 596 (771)
.....+|+|++|+||+|++ .+++..||||+++... ....+.+.+|+++++.+ +|||||+++++|.+.+
T Consensus 38 ~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~----- 112 (375)
T cd05104 38 SFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGG----- 112 (375)
T ss_pred ehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCC-----
Confidence 3345689999999999974 3456689999996432 33456889999999999 8999999999998776
Q ss_pred eEEEEEEeccCCCCCCCc--------------------------------------------------------------
Q 041479 597 FRALVYEFMHHGSLESCP-------------------------------------------------------------- 614 (771)
Q Consensus 597 ~~~lv~e~~~~g~L~~~~-------------------------------------------------------------- 614 (771)
..++|||||++|+|.++.
T Consensus 113 ~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (375)
T cd05104 113 PTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSG 192 (375)
T ss_pred cceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccc
Confidence 679999999999985431
Q ss_pred ----------------ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccC
Q 041479 615 ----------------RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMS 678 (771)
Q Consensus 615 ----------------~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 678 (771)
..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 193 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 269 (375)
T cd05104 193 SYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHGRITKICDFGLARDIRNDSN 269 (375)
T ss_pred eecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEECCCcEEEecCccceeccCccc
Confidence 1367888899999999999999985 999999999999999999999999999986543221
Q ss_pred Ccccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhhhcCccc
Q 041479 679 SNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLF 742 (771)
Q Consensus 679 ~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 742 (771)
. .......++..|+||| |||++|||++ |..||.+.... ..+.++.........+...+..+
T Consensus 270 ~--~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l 346 (375)
T cd05104 270 Y--VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVD-SKFYKMIKEGYRMLSPECAPSEM 346 (375)
T ss_pred c--cccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCch-HHHHHHHHhCccCCCCCCCCHHH
Confidence 1 1111233567899999 6999999998 88898764322 23444444444333344455666
Q ss_pred cccCcccChhchhhcCCHHHHHHHHHHhC
Q 041479 743 LVGGVQEGEETAEENIKKGQIRESLIAIL 771 (771)
Q Consensus 743 ~~~~~~cl~~~p~~Rpt~~~vl~~L~~~l 771 (771)
..++.+||+.||++|||+.|+++.|++.|
T Consensus 347 ~~li~~cl~~dP~~RPs~~eil~~l~~~~ 375 (375)
T cd05104 347 YDIMKSCWDADPLKRPTFKQIVQLIEQQL 375 (375)
T ss_pred HHHHHHHccCChhHCcCHHHHHHHHHhhC
Confidence 67778999999999999999999999865
No 40
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=1.4e-35 Score=311.74 Aligned_cols=340 Identities=26% Similarity=0.367 Sum_probs=295.4
Q ss_pred CcEEEEEcCCCCCcccCCccccCCCCCcEEEcCCCcccccCCccccCCCCCCEEecccCcCcccCCcccccCCcccccCC
Q 041479 44 QRVILLNLSGQNLTGTASPYIGNLTFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNALQGQIPDSRLILNKLEGNIP 123 (771)
Q Consensus 44 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~l~~n~l~~~~p 123 (771)
.+++-|.|...+|. .+|++++.|.+|++|.+++|++.+ +-++++.|+.|+.+++..|++. ..-+|
T Consensus 32 t~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~~-vhGELs~Lp~LRsv~~R~N~LK-------------nsGiP 96 (1255)
T KOG0444|consen 32 TQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLIS-VHGELSDLPRLRSVIVRDNNLK-------------NSGIP 96 (1255)
T ss_pred hheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhHh-hhhhhccchhhHHHhhhccccc-------------cCCCC
Confidence 57788888888887 788999999999999999999985 6778999999999999999975 23478
Q ss_pred ccccCCCCCCEEecccccCcCCCC------ccceeeecccccccccCccccCCCCCCEEecccCcCcccCChhhhhCCCC
Q 041479 124 SELGSLLKFKGLGLANNYFTGPIP------HLNMFQVSVYSLTGSIPIQLLNITSMEYFHVSENQLVGELPPHIGFTLPN 197 (771)
Q Consensus 124 ~~~~~l~~L~~L~Ls~N~l~~~lp------~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~ 197 (771)
..+..|..|..||||+|++++... ++.+|+||+|+|..+...-|.+|+.|-+||||+|++. .+|+.+- .|.+
T Consensus 97 ~diF~l~dLt~lDLShNqL~EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDLS~NrLe-~LPPQ~R-RL~~ 174 (1255)
T KOG0444|consen 97 TDIFRLKDLTILDLSHNQLREVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDLSNNRLE-MLPPQIR-RLSM 174 (1255)
T ss_pred chhcccccceeeecchhhhhhcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhccccchhh-hcCHHHH-HHhh
Confidence 888899999999999999985333 3678999999998655566789999999999999999 9999997 8999
Q ss_pred CcEEEeecCcccccCCccccCCCCCCEEEccccccC-CCCCcCcccccCCCCCcEEEccCccccccCChhhhhcccccce
Q 041479 198 VRILLLAGNQFFGNIPHSISNASKLEWLDFANNSLT-GLIPEDLDSLVNCTYLEVVSLSVNSLSGTLPNSLANFSSHLRY 276 (771)
Q Consensus 198 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~ 276 (771)
|++|+|++|.+.-..-..+..+++|++|.+++.+=+ ..+|.++ ..+.+|..+|+|.|.+. .+|+.+..+. +|+.
T Consensus 175 LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsl---d~l~NL~dvDlS~N~Lp-~vPecly~l~-~Lrr 249 (1255)
T KOG0444|consen 175 LQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSL---DDLHNLRDVDLSENNLP-IVPECLYKLR-NLRR 249 (1255)
T ss_pred hhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCch---hhhhhhhhccccccCCC-cchHHHhhhh-hhhe
Confidence 999999999987555556777889999999987644 2356555 66788999999999999 9999999987 7999
Q ss_pred eecccCcCcccCcccccccCCcceEecCCccceeccCccccCCCCCCEEEccCCcccc-cCCcccccccccccccccCcc
Q 041479 277 LYMSANPISGSIPTEIGNLKNLIIIAIEKFILIRNIPISVGYLLKLQVLSLFENNISR-EIPSSLGNFTFLTELNLCGNS 355 (771)
Q Consensus 277 L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~ 355 (771)
|+||+|+|+ .+.-..+...+|+.|+|+.|.+ ..+|.++..+++|+.|++.+|+++- -+|..++.+..|+.+..++|.
T Consensus 250 LNLS~N~it-eL~~~~~~W~~lEtLNlSrNQL-t~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~ 327 (1255)
T KOG0444|consen 250 LNLSGNKIT-ELNMTEGEWENLETLNLSRNQL-TVLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNK 327 (1255)
T ss_pred eccCcCcee-eeeccHHHHhhhhhhccccchh-ccchHHHhhhHHHHHHHhccCcccccCCccchhhhhhhHHHHhhccc
Confidence 999999999 5666777889999999999999 5789999999999999999999872 379999999999999999999
Q ss_pred ceecCCcccccccce-eeecccCcccCCCCcCCCCCCCCCeEECCCCcccccCCc
Q 041479 356 IRGSVPSALGSCHQL-WLDLSHNHLTGPIPLAVGNPKSIPHLDLSKNELSGEIPS 409 (771)
Q Consensus 356 l~~~~p~~~~~l~~l-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 409 (771)
+. ..|..+..|..| .|.|++|+|. .+|+++.-++.|+.|||..|.=--.+|.
T Consensus 328 LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNpnLVMPPK 380 (1255)
T KOG0444|consen 328 LE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENPNLVMPPK 380 (1255)
T ss_pred cc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccCCcCccCCCC
Confidence 98 899999999999 8999999998 7899999999999999999976534443
No 41
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=5.4e-33 Score=303.71 Aligned_cols=238 Identities=24% Similarity=0.288 Sum_probs=185.9
Q ss_pred ccccccccccccceEEEEEecC-----CCeEEEEEEeeccc-hhhHHHHHHHHHHHhcc-CCCCceeEEEEeecCCCCCc
Q 041479 523 LLLNVSYESLVKATVYKGILDL-----DQTFIAVKVLFLHQ-RGALKSFMAECQALRNI-RHRNLVKIITACSTSDFQGN 595 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~-----~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~ 595 (771)
+...-.+|+|.+|.||+|++.. +.+.||||++.... ....+.+.+|+++++.+ +|||||+++++|.+.+
T Consensus 40 ~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~---- 115 (374)
T cd05106 40 LQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGG---- 115 (374)
T ss_pred ceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCC----
Confidence 4445668999999999998643 23579999996543 34456789999999999 8999999999988776
Q ss_pred eeEEEEEEeccCCCCCCCc-------------------------------------------------------------
Q 041479 596 YFRALVYEFMHHGSLESCP------------------------------------------------------------- 614 (771)
Q Consensus 596 ~~~~lv~e~~~~g~L~~~~------------------------------------------------------------- 614 (771)
..++|||||++|+|.++.
T Consensus 116 -~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (374)
T cd05106 116 -PVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQS 194 (374)
T ss_pred -CeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccc
Confidence 679999999999985431
Q ss_pred ------------ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCccc
Q 041479 615 ------------RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQC 682 (771)
Q Consensus 615 ------------~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 682 (771)
..+++.++.+++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++....... ..
T Consensus 195 ~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~--~~ 269 (374)
T cd05106 195 SDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSN--YV 269 (374)
T ss_pred ccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEeCCCeEEEeeceeeeeccCCcc--ee
Confidence 1367788899999999999999985 999999999999999999999999999976533221 11
Q ss_pred ccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhhhcCccccccC
Q 041479 683 SSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFLVGG 746 (771)
Q Consensus 683 ~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 746 (771)
......+++.||||| |||++|||++ |+.||.+..... .+........+...+..+++.+...+
T Consensus 270 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li 348 (374)
T cd05106 270 VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS-KFYKMVKRGYQMSRPDFAPPEIYSIM 348 (374)
T ss_pred eccCCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH-HHHHHHHcccCccCCCCCCHHHHHHH
Confidence 111223567899999 6999999998 999997643322 23344444444444445566777777
Q ss_pred cccChhchhhcCCHHHHHHHHHHhC
Q 041479 747 VQEGEETAEENIKKGQIRESLIAIL 771 (771)
Q Consensus 747 ~~cl~~~p~~Rpt~~~vl~~L~~~l 771 (771)
.+||+.||++|||+.++++.|++++
T Consensus 349 ~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 349 KMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred HHHcCCChhhCcCHHHHHHHHHHHh
Confidence 7999999999999999999999874
No 42
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=8.5e-34 Score=306.53 Aligned_cols=234 Identities=22% Similarity=0.335 Sum_probs=193.7
Q ss_pred ccccccccceEEEEEecCCC---eEEEEEEeeccc-hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEE
Q 041479 527 VSYESLVKATVYKGILDLDQ---TFIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~---~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
..+|.|.||.||+|+++..+ ..||||.++.+. ++++.+|+.|+.||.++.||||++|.|+..... ..+||.
T Consensus 635 ~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~-----PvMIiT 709 (996)
T KOG0196|consen 635 KVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSK-----PVMIIT 709 (996)
T ss_pred EEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCc-----eeEEEh
Confidence 45799999999999998755 589999998775 567789999999999999999999999987766 678999
Q ss_pred EeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccC
Q 041479 603 EFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMS 678 (771)
Q Consensus 603 e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 678 (771)
|||++|+|+.+ ...+.+.+.+.+.++||.|+.||-++ +.|||||.++|||++.+-.+||+|||++|.+.+..
T Consensus 710 EyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm---~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~- 785 (996)
T KOG0196|consen 710 EYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP- 785 (996)
T ss_pred hhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhc---CchhhhhhhhheeeccceEEEeccccceeecccCC-
Confidence 99999999888 23588889999999999999999986 99999999999999999999999999999875544
Q ss_pred Ccccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhhhcCccc
Q 041479 679 SNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLF 742 (771)
Q Consensus 679 ~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 742 (771)
...+...+..=..+|.||| |||++||.++ |+.||-|+.. .+..+-+...++-+.+--+...+
T Consensus 786 ~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSN--QdVIkaIe~gyRLPpPmDCP~aL 863 (996)
T KOG0196|consen 786 EAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN--QDVIKAIEQGYRLPPPMDCPAAL 863 (996)
T ss_pred CccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccch--HHHHHHHHhccCCCCCCCCcHHH
Confidence 2233333333467899999 8999999999 9999977633 33444455555433333344556
Q ss_pred cccCcccChhchhhcCCHHHHHHHHHHhC
Q 041479 743 LVGGVQEGEETAEENIKKGQIRESLIAIL 771 (771)
Q Consensus 743 ~~~~~~cl~~~p~~Rpt~~~vl~~L~~~l 771 (771)
.+++..||++|-++||+..+++..|+++|
T Consensus 864 ~qLMldCWqkdR~~RP~F~qiV~~lDklI 892 (996)
T KOG0196|consen 864 YQLMLDCWQKDRNRRPKFAQIVSTLDKLI 892 (996)
T ss_pred HHHHHHHHHHHhhcCCCHHHHHHHHHHHh
Confidence 67888999999999999999999999975
No 43
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=6.4e-33 Score=290.64 Aligned_cols=231 Identities=20% Similarity=0.220 Sum_probs=185.7
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeeccch-hhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEec
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLHQR-GALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFM 605 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~~ 605 (771)
..+|+|.||.|..+.... ...||||.++.... ..+.+|.+||++|.+++|||||+++|+|..++ .+++|+|||
T Consensus 544 ekiGeGqFGEVhLCeveg-~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~De-----PicmI~EYm 617 (807)
T KOG1094|consen 544 EKIGEGQFGEVHLCEVEG-PLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDD-----PLCMITEYM 617 (807)
T ss_pred hhhcCcccceeEEEEecC-ceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCC-----chHHHHHHH
Confidence 468999999999998865 46999999987653 45689999999999999999999999999887 679999999
Q ss_pred cCCCCCCCc-----ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCc
Q 041479 606 HHGSLESCP-----RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSN 680 (771)
Q Consensus 606 ~~g~L~~~~-----~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 680 (771)
++|+|.++. ....-...++|+.|||.|++||.+. ++||||+.+.|+|+|.++++||+|||++|-+.....+.
T Consensus 618 EnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~ 694 (807)
T KOG1094|consen 618 ENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYR 694 (807)
T ss_pred hcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhh---chhhccccccceeecCcccEEecCcccccccccCCcee
Confidence 999998871 1234556788999999999999985 99999999999999999999999999999665444321
Q ss_pred ccccccccccccccchh---------------HHHHHHHHHh--CCCCCCccccCCccHHHHHHhhCC-------Cchhh
Q 041479 681 QCSSVGLKGTVGYATPE---------------YGILLLEIFT--GKRPTSDMFTEGLDLHNFVKMALP-------DQILQ 736 (771)
Q Consensus 681 ~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t--g~~P~~~~~~~~~~~~~~~~~~~~-------~~~~~ 736 (771)
. ....+-..+||||| ||+++||+++ .+.||++...+. ..+-....++ ...+.
T Consensus 695 v--qgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~--vven~~~~~~~~~~~~~l~~P~ 770 (807)
T KOG1094|consen 695 V--QGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQ--VVENAGEFFRDQGRQVVLSRPP 770 (807)
T ss_pred e--ecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHH--HHHhhhhhcCCCCcceeccCCC
Confidence 1 11234567999999 8999999988 889998764432 3444444333 22344
Q ss_pred hcCccccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 737 VLDPLFLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 737 ~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
++...+.+.+.+||..|..+||+.+++...|++.
T Consensus 771 ~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 771 ACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred cCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 5555555677799999999999999999988863
No 44
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=1.5e-36 Score=305.24 Aligned_cols=391 Identities=27% Similarity=0.387 Sum_probs=272.0
Q ss_pred cEEEEEcCCCCCcccCCccccCCCCCcEEEcCCCcccccCCccccCCCCCCEEecccCcCcccCCccc----------cc
Q 041479 45 RVILLNLSGQNLTGTASPYIGNLTFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNALQGQIPDSR----------LI 114 (771)
Q Consensus 45 ~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~----------l~ 114 (771)
-+..|++++|.++ .+.+.+.++..|.+|++++|+++ ..|.+++.+..++.|+.++|+++ .+|+.+ ..
T Consensus 46 ~l~~lils~N~l~-~l~~dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s 122 (565)
T KOG0472|consen 46 DLQKLILSHNDLE-VLREDLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCS 122 (565)
T ss_pred chhhhhhccCchh-hccHhhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhcc
Confidence 4677999999999 66677899999999999999999 58999999999999999999987 344332 33
Q ss_pred CCcccccCCccccCCCCCCEEecccccCcCCCC------ccceeeecccccccccCccccCCCCCCEEecccCcCcccCC
Q 041479 115 LNKLEGNIPSELGSLLKFKGLGLANNYFTGPIP------HLNMFQVSVYSLTGSIPIQLLNITSMEYFHVSENQLVGELP 188 (771)
Q Consensus 115 ~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp------~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp 188 (771)
.|.+. .+|+.++.+..|+.|+..+|+++...+ .+..+++.+|+++...|..+. ++.|+.||...|.++ ++|
T Consensus 123 ~n~~~-el~~~i~~~~~l~dl~~~~N~i~slp~~~~~~~~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N~L~-tlP 199 (565)
T KOG0472|consen 123 SNELK-ELPDSIGRLLDLEDLDATNNQISSLPEDMVNLSKLSKLDLEGNKLKALPENHIA-MKRLKHLDCNSNLLE-TLP 199 (565)
T ss_pred cccee-ecCchHHHHhhhhhhhccccccccCchHHHHHHHHHHhhccccchhhCCHHHHH-HHHHHhcccchhhhh-cCC
Confidence 34443 456666666677777777777663222 256667777777754444333 777777787777776 788
Q ss_pred hhhhhCCCCCcEEEeecCcccccCCccccCCCCCCEEEccccccCCCCCcCcccccCCCCCcEEEccCccccccCChhhh
Q 041479 189 PHIGFTLPNVRILLLAGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSLSGTLPNSLA 268 (771)
Q Consensus 189 ~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~ 268 (771)
+.++ .+.+|..|||.+|+|. ..| .|.+++.|++|+++.|+|..+ |... +.++++|.+|||..|+++ .+|+.+.
T Consensus 200 ~~lg-~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~~l-pae~--~~~L~~l~vLDLRdNklk-e~Pde~c 272 (565)
T KOG0472|consen 200 PELG-GLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIEML-PAEH--LKHLNSLLVLDLRDNKLK-EVPDEIC 272 (565)
T ss_pred hhhc-chhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHHhh-HHHH--hcccccceeeeccccccc-cCchHHH
Confidence 8777 7778888888888887 555 777888888888888887744 4322 367888999999999998 8888887
Q ss_pred hcccccceeecccCcCcccCcccccccCCcceEecCCccceecc------------------------------------
Q 041479 269 NFSSHLRYLYMSANPISGSIPTEIGNLKNLIIIAIEKFILIRNI------------------------------------ 312 (771)
Q Consensus 269 ~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~------------------------------------ 312 (771)
-+. +|++||+|+|.|+ .+|.+++++ .|+.|-+.+|.+.+.-
T Consensus 273 lLr-sL~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t 349 (565)
T KOG0472|consen 273 LLR-SLERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMT 349 (565)
T ss_pred Hhh-hhhhhcccCCccc-cCCcccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCcccccccCC
Confidence 775 7999999999998 678888988 8888888888652110
Q ss_pred --Ccccc---CCCC--------------------------CCEEEccCCcccccCCccccccccccc-ccccCccceecC
Q 041479 313 --PISVG---YLLK--------------------------LQVLSLFENNISREIPSSLGNFTFLTE-LNLCGNSIRGSV 360 (771)
Q Consensus 313 --p~~~~---~l~~--------------------------L~~L~Ls~N~l~~~~p~~~~~l~~L~~-L~Ls~N~l~~~~ 360 (771)
+..|. .+.+ .+..+++.|++. .+|..+..++.+.+ +.+++|.+. -+
T Consensus 350 ~~~~~~~~~~~~i~tkiL~~s~~qlt~VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lkelvT~l~lsnn~is-fv 427 (565)
T KOG0472|consen 350 LPSESFPDIYAIITTKILDVSDKQLTLVPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKELVTDLVLSNNKIS-FV 427 (565)
T ss_pred CCCCcccchhhhhhhhhhcccccccccCCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHHHHHHHHHhhcCccc-cc
Confidence 00000 0111 344556666665 45555555544433 333334333 56
Q ss_pred Ccccccccce-eeecccCcccCCCCcCCCCCCCCCeEECCCCcccccCCcchhhh--------------------hcccc
Q 041479 361 PSALGSCHQL-WLDLSHNHLTGPIPLAVGNPKSIPHLDLSKNELSGEIPSSLAWI--------------------FGYIS 419 (771)
Q Consensus 361 p~~~~~l~~l-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~--------------------~~~l~ 419 (771)
|..+..++.+ .|+|++|-+. .+|..++.+..|+.||+|.|+|. .+|...... ..++.
T Consensus 428 ~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~ 505 (565)
T KOG0472|consen 428 PLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQIGSVDPSGLKNMR 505 (565)
T ss_pred hHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccc-cchHHHhhHHHHHHHHhccccccccChHHhhhhh
Confidence 6666667777 6777777776 56777777777777777777665 555432210 23678
Q ss_pred cccEEECcCCCCCCCCCccccccccccccccCCCcc
Q 041479 420 IFAKLNLSYNNLDGDVPRKMIFKNASAISEAGNEKL 455 (771)
Q Consensus 420 ~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~~~~n~~l 455 (771)
+|..|||.+|.+...+|......++..+.+.|||+.
T Consensus 506 nL~tLDL~nNdlq~IPp~LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 506 NLTTLDLQNNDLQQIPPILGNMTNLRHLELDGNPFR 541 (565)
T ss_pred hcceeccCCCchhhCChhhccccceeEEEecCCccC
Confidence 888888888888855554445677777888888765
No 45
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=1.1e-32 Score=294.42 Aligned_cols=219 Identities=22% Similarity=0.230 Sum_probs=176.3
Q ss_pred ccccccceEEEEEecCCCeEEEEEEeecc---chhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEec
Q 041479 529 YESLVKATVYKGILDLDQTFIAVKVLFLH---QRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFM 605 (771)
Q Consensus 529 l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~~ 605 (771)
+|+|.+|+||+|++..+++.||+|++... .......+.+|+.++++++|||||++++++.+.+ ..|+||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~~lv~e~~ 75 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPE-----KLYLVLAFI 75 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCC-----eEEEEEcCC
Confidence 58999999999999998889999999653 2344567889999999999999999999987766 789999999
Q ss_pred cCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCccc
Q 041479 606 HHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQC 682 (771)
Q Consensus 606 ~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 682 (771)
++|+|.++ ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 76 ~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~---- 148 (312)
T cd05585 76 NGGELFHHLQREGRFDLSRARFYTAELLCALENLHKF---NVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDD---- 148 (312)
T ss_pred CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeEECCCCcEEEEECcccccCccCCC----
Confidence 99999765 34688999999999999999999985 899999999999999999999999999985432211
Q ss_pred ccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhh--CCCchhhhcCcccccc
Q 041479 683 SSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMA--LPDQILQVLDPLFLVG 745 (771)
Q Consensus 683 ~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 745 (771)
.....+||+.|+||| +||++|||++|+.||.+.. ..+..... .+...+..+++.+...
T Consensus 149 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l 223 (312)
T cd05585 149 KTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDEN-----VNEMYRKILQEPLRFPDGFDRDAKDL 223 (312)
T ss_pred ccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCC-----HHHHHHHHHcCCCCCCCcCCHHHHHH
Confidence 123456999999999 6999999999999996532 11222211 1233445566666677
Q ss_pred CcccChhchhhcCC---HHHHH
Q 041479 746 GVQEGEETAEENIK---KGQIR 764 (771)
Q Consensus 746 ~~~cl~~~p~~Rpt---~~~vl 764 (771)
..+||..||++||+ +.+++
T Consensus 224 i~~~L~~dp~~R~~~~~~~e~l 245 (312)
T cd05585 224 LIGLLSRDPTRRLGYNGAQEIK 245 (312)
T ss_pred HHHHcCCCHHHcCCCCCHHHHH
Confidence 77999999999985 45554
No 46
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=1.2e-32 Score=295.35 Aligned_cols=223 Identities=23% Similarity=0.255 Sum_probs=178.1
Q ss_pred cccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEe
Q 041479 528 SYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEF 604 (771)
Q Consensus 528 ~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~ 604 (771)
.+|+|.+|+||+++.+.+++.||||++.... ......+.+|++++++++||||+++++++.+.+ ..|+||||
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~-----~~~lv~e~ 76 (323)
T cd05571 2 LLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHD-----RLCFVMEY 76 (323)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCC-----EEEEEEeC
Confidence 3789999999999999999999999997542 334567889999999999999999999988776 78999999
Q ss_pred ccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCcc
Q 041479 605 MHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQ 681 (771)
Q Consensus 605 ~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 681 (771)
+++|+|.+. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 77 ~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~---- 149 (323)
T cd05571 77 ANGGELFFHLSRERVFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDG---- 149 (323)
T ss_pred CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCC----
Confidence 999999665 34688999999999999999999986 99999999999999999999999999987532211
Q ss_pred cccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCccccccC
Q 041479 682 CSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFLVGG 746 (771)
Q Consensus 682 ~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 746 (771)
......+||+.|+||| +||++|||++|+.||.+... ....+..... ....+..+++.+....
T Consensus 150 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~--~~~~~~~~~~-~~~~p~~~~~~~~~li 226 (323)
T cd05571 150 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--EKLFELILME-EIRFPRTLSPEAKSLL 226 (323)
T ss_pred CcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCH--HHHHHHHHcC-CCCCCCCCCHHHHHHH
Confidence 1122356999999999 69999999999999964211 1122221111 1223344566666677
Q ss_pred cccChhchhhcC-----CHHHHHH
Q 041479 747 VQEGEETAEENI-----KKGQIRE 765 (771)
Q Consensus 747 ~~cl~~~p~~Rp-----t~~~vl~ 765 (771)
.+||+.||++|| ++.++++
T Consensus 227 ~~~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 227 AGLLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred HHHccCCHHHcCCCCCCCHHHHHc
Confidence 799999999999 7888874
No 47
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=2.4e-32 Score=284.92 Aligned_cols=233 Identities=21% Similarity=0.258 Sum_probs=182.9
Q ss_pred cccccccccceEEEEEec---CCCeEEEEEEeeccc-hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEE
Q 041479 526 NVSYESLVKATVYKGILD---LDQTFIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALV 601 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~---~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv 601 (771)
.-.+|+|.+|.||+|.++ ..+..||+|.++... ....+.|.+|+.++++++||||+++++++...+ ..++|
T Consensus 10 ~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-----~~~lv 84 (266)
T cd05064 10 ERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGN-----TMMIV 84 (266)
T ss_pred eeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCC-----CcEEE
Confidence 345899999999999875 345689999997543 334568999999999999999999999987765 67999
Q ss_pred EEeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCccc
Q 041479 602 YEFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVM 677 (771)
Q Consensus 602 ~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~ 677 (771)
|||+++|+|.++ ...+++.++..++.|++.|++|||+. +++||||||+||+++.++.+|++|||.+.......
T Consensus 85 ~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~ 161 (266)
T cd05064 85 TEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEA 161 (266)
T ss_pred EEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEcCCCcEEECCCcccccccccc
Confidence 999999999766 23578999999999999999999985 89999999999999999999999999876432211
Q ss_pred CCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhhhcCcc
Q 041479 678 SSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPL 741 (771)
Q Consensus 678 ~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 741 (771)
........++..|+||| |||++||+++ |+.||.+... ....+......+...+..++..
T Consensus 162 ---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 236 (266)
T cd05064 162 ---IYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSG--QDVIKAVEDGFRLPAPRNCPNL 236 (266)
T ss_pred ---hhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCH--HHHHHHHHCCCCCCCCCCCCHH
Confidence 11111234567899999 6999999876 9999975422 2233333333332334445555
Q ss_pred ccccCcccChhchhhcCCHHHHHHHHHHhC
Q 041479 742 FLVGGVQEGEETAEENIKKGQIRESLIAIL 771 (771)
Q Consensus 742 ~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~l 771 (771)
+.....+||+.+|++|||+.++.+.|.+++
T Consensus 237 ~~~li~~c~~~~p~~RP~~~~i~~~l~~~~ 266 (266)
T cd05064 237 LHQLMLDCWQKERGERPRFSQIHSILSKMV 266 (266)
T ss_pred HHHHHHHHcCCCchhCCCHHHHHHHHHhhC
Confidence 666777999999999999999999998764
No 48
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.2e-33 Score=301.17 Aligned_cols=229 Identities=20% Similarity=0.296 Sum_probs=194.2
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeecc----chhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEE
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLH----QRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALV 601 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~----~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv 601 (771)
...+|.|.+-|||||.+..+|..||.-.++.. .+...++|..|+.+|+.|+|||||+++.+|.+... ...-+|
T Consensus 45 ~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n---~~in~i 121 (632)
T KOG0584|consen 45 DEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDN---KTINFI 121 (632)
T ss_pred hhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCC---ceeeee
Confidence 45689999999999999999989997666433 34567899999999999999999999999988763 257899
Q ss_pred EEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCC-CCceEEecccCccccCccc
Q 041479 602 YEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN-DMTAHMGDFGLTRFIPEVM 677 (771)
Q Consensus 602 ~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~-~~~~kl~DfGla~~~~~~~ 677 (771)
.|.|..|+|.++ .++++......+++||++||.|||++ .|+|+|||||.+||+|.. .|.+||+|.|+|..+....
T Consensus 122 TEL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~ 200 (632)
T KOG0584|consen 122 TELFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSH 200 (632)
T ss_pred eecccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhhccc
Confidence 999999999888 45688889999999999999999997 689999999999999974 6899999999998765433
Q ss_pred CCcccccccccccccccchh--------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCcccc
Q 041479 678 SSNQCSSVGLKGTVGYATPE--------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFL 743 (771)
Q Consensus 678 ~~~~~~~~~~~gt~~y~aPE--------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 743 (771)
. ...+|||-||||| ||++++||+|+..||++.........+...+.-|..+..+-||.++
T Consensus 201 a------ksvIGTPEFMAPEmYEE~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl~kV~dPevr 274 (632)
T KOG0584|consen 201 A------KSVIGTPEFMAPEMYEENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAALSKVKDPEVR 274 (632)
T ss_pred c------ceeccCccccChHHHhhhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHhhccCCHHHH
Confidence 2 2367999999999 7999999999999998864444433344444456778888899999
Q ss_pred ccCcccChhchhhcCCHHHHHH
Q 041479 744 VGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 744 ~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
.++.+|+.. .++|||+.|++.
T Consensus 275 ~fIekCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 275 EFIEKCLAT-KSERLSAKELLK 295 (632)
T ss_pred HHHHHHhcC-chhccCHHHHhh
Confidence 999999999 999999999985
No 49
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=99.98 E-value=4.6e-32 Score=285.75 Aligned_cols=225 Identities=23% Similarity=0.238 Sum_probs=177.0
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEE
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYE 603 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e 603 (771)
-.+|+|.+|+||+|.+..+++.||||.+.... ......+.+|++++++++|+||+++++++.+.+ ..++|||
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~-----~~~lv~e 80 (285)
T cd05631 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKD-----ALCLVLT 80 (285)
T ss_pred EEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCC-----eEEEEEE
Confidence 35799999999999999888999999986542 233456889999999999999999999987766 7899999
Q ss_pred eccCCCCCCC-----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccC
Q 041479 604 FMHHGSLESC-----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMS 678 (771)
Q Consensus 604 ~~~~g~L~~~-----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 678 (771)
|+++|+|.+. ...+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.......
T Consensus 81 ~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 157 (285)
T cd05631 81 IMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGET 157 (285)
T ss_pred ecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCe
Confidence 9999999654 23578899999999999999999985 999999999999999999999999999986543221
Q ss_pred Ccccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHH--hhCCCchhhhcCcc
Q 041479 679 SNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVK--MALPDQILQVLDPL 741 (771)
Q Consensus 679 ~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 741 (771)
.....||+.||||| +||++|||++|+.||....... ....... ...+......+++.
T Consensus 158 -----~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~s~~ 231 (285)
T cd05631 158 -----VRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERV-KREEVDRRVKEDQEEYSEKFSED 231 (285)
T ss_pred -----ecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcch-hHHHHHHHhhcccccCCccCCHH
Confidence 12346899999999 6999999999999997532211 1111111 11112233345556
Q ss_pred ccccCcccChhchhhcCC-----HHHHHH
Q 041479 742 FLVGGVQEGEETAEENIK-----KGQIRE 765 (771)
Q Consensus 742 ~~~~~~~cl~~~p~~Rpt-----~~~vl~ 765 (771)
+..+..+||+.||++||+ ++++++
T Consensus 232 ~~~li~~~l~~~P~~R~~~~~~~~~~~~~ 260 (285)
T cd05631 232 AKSICRMLLTKNPKERLGCRGNGAAGVKQ 260 (285)
T ss_pred HHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence 666677999999999997 777775
No 50
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=99.98 E-value=4.4e-32 Score=305.80 Aligned_cols=231 Identities=18% Similarity=0.181 Sum_probs=182.7
Q ss_pred ccccccccccccceEEEEEecCC-CeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLD-QTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALV 601 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~-~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv 601 (771)
+...-.+|.|.+|+||+|....+ ++.||+|.+..........+.+|+++++.++|||||++++++...+ ..|+|
T Consensus 69 y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~-----~~~lv 143 (478)
T PTZ00267 69 YVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDD-----KLLLI 143 (478)
T ss_pred EEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECC-----EEEEE
Confidence 34455689999999999998777 7789999886665555677889999999999999999999998776 78999
Q ss_pred EEeccCCCCCCC-------cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccC
Q 041479 602 YEFMHHGSLESC-------PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIP 674 (771)
Q Consensus 602 ~e~~~~g~L~~~-------~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~ 674 (771)
|||+++|+|.+. ...+++.++..++.|++.||+|+|+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 144 ~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~ 220 (478)
T PTZ00267 144 MEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANIFLMPTGIIKLGDFGFSKQYS 220 (478)
T ss_pred EECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhEEECCCCcEEEEeCcCceecC
Confidence 999999999653 22478888999999999999999985 99999999999999999999999999998654
Q ss_pred cccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcC
Q 041479 675 EVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLD 739 (771)
Q Consensus 675 ~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 739 (771)
.... .......+||+.|+||| +||++|||++|+.||.+.... ..+.....+.. ...+..++
T Consensus 221 ~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~-~~~~~~~~~~~-~~~~~~~s 296 (478)
T PTZ00267 221 DSVS--LDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQR-EIMQQVLYGKY-DPFPCPVS 296 (478)
T ss_pred Cccc--cccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhCCC-CCCCccCC
Confidence 3221 11233457999999999 699999999999999653211 11222222222 22333455
Q ss_pred ccccccCcccChhchhhcCCHHHHHH
Q 041479 740 PLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 740 ~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
+.+.....+||.+||++||++.+++.
T Consensus 297 ~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 297 SGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred HHHHHHHHHHhccChhhCcCHHHHHh
Confidence 56666777999999999999999874
No 51
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=99.98 E-value=5.6e-33 Score=279.10 Aligned_cols=226 Identities=20% Similarity=0.211 Sum_probs=184.3
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeecc---chhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLH---QRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRA 599 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 599 (771)
+....++|.|.+|.|-+|.....++.||||.++.. ++++.-.+.+||+||+.++||||+.++++|...+ .+.
T Consensus 55 yE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkd-----KIv 129 (668)
T KOG0611|consen 55 YEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKD-----KIV 129 (668)
T ss_pred HHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCc-----eEE
Confidence 34456799999999999998888889999999655 3455667899999999999999999999998877 789
Q ss_pred EEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcc
Q 041479 600 LVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676 (771)
Q Consensus 600 lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~ 676 (771)
|||||..+|+|.++ .+.+++.+..+++.||..|+.|+|.+ +++|||+|.+|||+|+++.+||+|||++-.+...
T Consensus 130 ivMEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENILLD~N~NiKIADFGLSNly~~~ 206 (668)
T KOG0611|consen 130 IVMEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENILLDQNNNIKIADFGLSNLYADK 206 (668)
T ss_pred EEEEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhc---cceecccchhheeecCCCCeeeeccchhhhhccc
Confidence 99999999999988 56799999999999999999999986 9999999999999999999999999999876543
Q ss_pred cCCcccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCc
Q 041479 677 MSSNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDP 740 (771)
Q Consensus 677 ~~~~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 740 (771)
. ...++||+|-|.+|| +||++|-++.|..||++- .....+.++..+.+.+..... |
T Consensus 207 k-----fLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~-Dhk~lvrQIs~GaYrEP~~PS-d- 278 (668)
T KOG0611|consen 207 K-----FLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGR-DHKRLVRQISRGAYREPETPS-D- 278 (668)
T ss_pred c-----HHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCc-hHHHHHHHhhcccccCCCCCc-h-
Confidence 2 345678999999999 799999999999999762 223334445555544221111 1
Q ss_pred cccccCcccChhchhhcCCHHHHHH
Q 041479 741 LFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 741 ~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
-...+..|+..+|++|.|+.||..
T Consensus 279 -A~gLIRwmLmVNP~RRATieDiAs 302 (668)
T KOG0611|consen 279 -ASGLIRWMLMVNPERRATIEDIAS 302 (668)
T ss_pred -HHHHHHHHHhcCcccchhHHHHhh
Confidence 112233777889999999999874
No 52
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.98 E-value=3.8e-33 Score=263.64 Aligned_cols=229 Identities=22% Similarity=0.248 Sum_probs=190.3
Q ss_pred cccccccccccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCce
Q 041479 520 RKDLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNY 596 (771)
Q Consensus 520 ~~~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~ 596 (771)
..++.-.-.+|.|.||.||.|+.+.+.-.||+|++...+ .+..+++.+|++|-+.++||||+++++++.+..
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~----- 95 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSK----- 95 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccc-----
Confidence 345556667899999999999999999999999997654 344578999999999999999999999998877
Q ss_pred eEEEEEEeccCCCCCCC-----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCcc
Q 041479 597 FRALVYEFMHHGSLESC-----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTR 671 (771)
Q Consensus 597 ~~~lv~e~~~~g~L~~~-----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~ 671 (771)
..|+++||.+.|++... ...+++.....++.|+|.|+.|+|. ++|+||||||+|+|++..+..||+|||.+.
T Consensus 96 riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~---k~VIhRdiKpenlLlg~~~~lkiAdfGwsV 172 (281)
T KOG0580|consen 96 RIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHL---KRVIHRDIKPENLLLGSAGELKIADFGWSV 172 (281)
T ss_pred eeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhcc---CCcccCCCCHHHhccCCCCCeeccCCCcee
Confidence 78999999999998654 4468888899999999999999997 499999999999999999999999999986
Q ss_pred ccCcccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhh
Q 041479 672 FIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQ 736 (771)
Q Consensus 672 ~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 736 (771)
.-+. ......|||.-|.+|| +||+.||++.|.+||.... .+....++.+..+.. +.
T Consensus 173 ~~p~------~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~-~~etYkrI~k~~~~~--p~ 243 (281)
T KOG0580|consen 173 HAPS------NKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQS-HSETYKRIRKVDLKF--PS 243 (281)
T ss_pred ecCC------CCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhh-hHHHHHHHHHccccC--Cc
Confidence 4332 1234578999999999 6999999999999997653 334455555554432 25
Q ss_pred hcCccccccCcccChhchhhcCCHHHHHH
Q 041479 737 VLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 737 ~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
.+....++...+|+.++|.+|.+..|+++
T Consensus 244 ~is~~a~dlI~~ll~~~p~~r~~l~~v~~ 272 (281)
T KOG0580|consen 244 TISGGAADLISRLLVKNPIERLALTEVMD 272 (281)
T ss_pred ccChhHHHHHHHHhccCccccccHHHHhh
Confidence 55555666677999999999999999875
No 53
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=99.98 E-value=1.3e-32 Score=305.60 Aligned_cols=239 Identities=21% Similarity=0.183 Sum_probs=187.5
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccC-CCCceeEEE-EeecCCCCC-ceeEEEEE
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIR-HRNLVKIIT-ACSTSDFQG-NYFRALVY 602 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~-~~~~~~~~~-~~~~~lv~ 602 (771)
..-+.||+||.||.|+...++..||+|++...++...+...+||++|++|+ |||||.+++ ........+ .++.+|.|
T Consensus 42 ~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~EvllLm 121 (738)
T KOG1989|consen 42 EKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEVLLLM 121 (738)
T ss_pred EEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEEEeeh
Confidence 345789999999999999887899999998888888999999999999997 999999999 443332223 46889999
Q ss_pred EeccCCCCCCC-----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCccc
Q 041479 603 EFMHHGSLESC-----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVM 677 (771)
Q Consensus 603 e~~~~g~L~~~-----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~ 677 (771)
|||+||.|-++ ...|++.++++|+.++|+|+++||.. +++|||||||.+||||+.++..|+||||.|.-.....
T Consensus 122 EyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~~~~ 200 (738)
T KOG1989|consen 122 EYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDFGSATTKILSP 200 (738)
T ss_pred hhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCcccccccccCCC
Confidence 99999999776 34599999999999999999999985 7899999999999999999999999999986322111
Q ss_pred CCc-----ccccccccccccccchh------------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCch
Q 041479 678 SSN-----QCSSVGLKGTVGYATPE------------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQI 734 (771)
Q Consensus 678 ~~~-----~~~~~~~~gt~~y~aPE------------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~ 734 (771)
... ........-|+.|+||| +||++|-|+....||++.-...+ +.+.+..+.
T Consensus 201 ~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~laI-----lng~Y~~P~ 275 (738)
T KOG1989|consen 201 TSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKLAI-----LNGNYSFPP 275 (738)
T ss_pred ccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcceeE-----EeccccCCC
Confidence 000 00011223589999999 69999999999999986422222 233332222
Q ss_pred hhhcCccccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 735 LQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 735 ~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
.+.....++.++..||+.||.+||++.+|+..+.++
T Consensus 276 ~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l 311 (738)
T KOG1989|consen 276 FPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFEL 311 (738)
T ss_pred CccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHH
Confidence 233344555566699999999999999999988765
No 54
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=99.98 E-value=2.6e-32 Score=285.99 Aligned_cols=229 Identities=19% Similarity=0.196 Sum_probs=177.5
Q ss_pred ccccccccccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCcee
Q 041479 521 KDLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYF 597 (771)
Q Consensus 521 ~~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 597 (771)
.++.....+|.|+||.||.|+-+++|..+|+|+++... ..+++..+.|-.+|....+|+||+|+..|.+.+ +
T Consensus 141 ~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~-----~ 215 (550)
T KOG0605|consen 141 DDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKE-----Y 215 (550)
T ss_pred ccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCC-----e
Confidence 44555667899999999999999999999999997553 566788999999999999999999999987776 8
Q ss_pred EEEEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccC
Q 041479 598 RALVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIP 674 (771)
Q Consensus 598 ~~lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~ 674 (771)
+||||||++|||+..+ ...|++..+..++.+++.|++.+|+. |+|||||||+|+|||..|++|++|||++..+.
T Consensus 216 LYLiMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~ 292 (550)
T KOG0605|consen 216 LYLIMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLD 292 (550)
T ss_pred eEEEEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecCCCCEeeccccccchhh
Confidence 9999999999998766 55788999999999999999999986 99999999999999999999999999996432
Q ss_pred cc---------------c----CCc-c-----------------------cccccccccccccchh--------------
Q 041479 675 EV---------------M----SSN-Q-----------------------CSSVGLKGTVGYATPE-------------- 697 (771)
Q Consensus 675 ~~---------------~----~~~-~-----------------------~~~~~~~gt~~y~aPE-------------- 697 (771)
.. . ... . ......+|||-|||||
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwW 372 (550)
T KOG0605|consen 293 KKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWW 372 (550)
T ss_pred hhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHH
Confidence 10 0 000 0 0012467999999999
Q ss_pred -HHHHHHHHHhCCCCCCccccCCccHHHHHHhh--CCCchhhhcCccccccCcccChhchhhcCC
Q 041479 698 -YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMA--LPDQILQVLDPLFLVGGVQEGEETAEENIK 759 (771)
Q Consensus 698 -~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt 759 (771)
+|||+|||+.|.+||....+.. .+.+++... +..+....+.++-++.+.+|+. ||++|.-
T Consensus 373 SLG~ImyEmLvGyPPF~s~tp~~-T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG 435 (550)
T KOG0605|consen 373 SLGCIMYEMLVGYPPFCSETPQE-TYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLG 435 (550)
T ss_pred HHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcC
Confidence 6999999999999996543222 233333333 2222222223333445557776 9999974
No 55
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.98 E-value=5.8e-32 Score=293.95 Aligned_cols=229 Identities=26% Similarity=0.337 Sum_probs=181.3
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccc-hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALV 601 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv 601 (771)
+.....+|+|.+|+||+|++..+++.||||++.... ....+.+.+|++++++++|+||+++++++...+ ..++|
T Consensus 76 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~~lv 150 (353)
T PLN00034 76 LERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNG-----EIQVL 150 (353)
T ss_pred HhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCC-----eEEEE
Confidence 334456899999999999999888899999996543 344578999999999999999999999987766 68999
Q ss_pred EEeccCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCcc
Q 041479 602 YEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQ 681 (771)
Q Consensus 602 ~e~~~~g~L~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 681 (771)
|||+++|+|.... ..++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 151 ~e~~~~~~L~~~~-~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~--- 223 (353)
T PLN00034 151 LEFMDGGSLEGTH-IADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMD--- 223 (353)
T ss_pred EecCCCCcccccc-cCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEcccccceecccccc---
Confidence 9999999997642 346677889999999999999986 899999999999999999999999999986543221
Q ss_pred cccccccccccccchh--------------------HHHHHHHHHhCCCCCCccccCCccHHHH---HHhhCCCchhhhc
Q 041479 682 CSSVGLKGTVGYATPE--------------------YGILLLEIFTGKRPTSDMFTEGLDLHNF---VKMALPDQILQVL 738 (771)
Q Consensus 682 ~~~~~~~gt~~y~aPE--------------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 738 (771)
......||..|+||| |||++|||++|+.||..... ..+... .....+......+
T Consensus 224 -~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 300 (353)
T PLN00034 224 -PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQ--GDWASLMCAICMSQPPEAPATA 300 (353)
T ss_pred -cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCC--ccHHHHHHHHhccCCCCCCCcc
Confidence 112346899999999 69999999999999963211 112221 1122223334455
Q ss_pred CccccccCcccChhchhhcCCHHHHHHH
Q 041479 739 DPLFLVGGVQEGEETAEENIKKGQIRES 766 (771)
Q Consensus 739 ~~~~~~~~~~cl~~~p~~Rpt~~~vl~~ 766 (771)
+..+.....+||+.||++|||+.|+++.
T Consensus 301 ~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 301 SREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 6666677779999999999999999863
No 56
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=99.98 E-value=2.7e-34 Score=278.31 Aligned_cols=228 Identities=21% Similarity=0.219 Sum_probs=190.1
Q ss_pred cccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEE
Q 041479 524 LLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYE 603 (771)
Q Consensus 524 ~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e 603 (771)
.....+|+|++|.||||.+++.|+.||||.+... .+.++..+|+.+|+++..|+||++||.|+... ..|+|||
T Consensus 36 Di~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~--sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~s-----DLWIVME 108 (502)
T KOG0574|consen 36 DIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD--TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHS-----DLWIVME 108 (502)
T ss_pred HHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc--chHHHHHHHHHHHHHcCCchhhhhhhhhccCC-----ceEeehh
Confidence 3456789999999999999999999999998654 35688999999999999999999999987665 5799999
Q ss_pred eccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCC
Q 041479 604 FMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSS 679 (771)
Q Consensus 604 ~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 679 (771)
||..|+..+. .+.+++.++..+....++||+|||.. .=+|||||+.|||+..+|.+|++|||.|..+.+...
T Consensus 109 YCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMA- 184 (502)
T KOG0574|consen 109 YCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMA- 184 (502)
T ss_pred hcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEcccchhhhhhccccchhhhhHH-
Confidence 9999998776 56799999999999999999999986 679999999999999999999999999987765432
Q ss_pred cccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCC-CchhhhcCcccc
Q 041479 680 NQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALP-DQILQVLDPLFL 743 (771)
Q Consensus 680 ~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 743 (771)
...++.|||.||||| +|++..||..|++||+|+.+....+. +-....| .+-++..+..+.
T Consensus 185 ---KRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFM-IPT~PPPTF~KPE~WS~~F~ 260 (502)
T KOG0574|consen 185 ---KRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFM-IPTKPPPTFKKPEEWSSEFN 260 (502)
T ss_pred ---hhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEe-ccCCCCCCCCChHhhhhHHH
Confidence 345678999999999 69999999999999999876544321 1111112 344555666666
Q ss_pred ccCcccChhchhhcCCHHHHHHH
Q 041479 744 VGGVQEGEETAEENIKKGQIRES 766 (771)
Q Consensus 744 ~~~~~cl~~~p~~Rpt~~~vl~~ 766 (771)
....+|+.++|++|-|+-++++.
T Consensus 261 DFi~~CLiK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 261 DFIRSCLIKKPEERKTALRLCEH 283 (502)
T ss_pred HHHHHHhcCCHHHHHHHHHHhhh
Confidence 67779999999999999887753
No 57
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.98 E-value=8.5e-32 Score=277.23 Aligned_cols=236 Identities=26% Similarity=0.314 Sum_probs=177.6
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhc--cCCCCceeEEEEeecCCCCCceeEEEEEEe
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRN--IRHRNLVKIITACSTSDFQGNYFRALVYEF 604 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~--l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~ 604 (771)
.-.|+|.||+||||.+.+ +.||||++... ..+.|..|-+|.+. ++|+||++++++-...... ...++||+||
T Consensus 216 eli~~Grfg~V~KaqL~~--~~VAVKifp~~---~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~-~~eywLVt~f 289 (534)
T KOG3653|consen 216 ELIGRGRFGCVWKAQLDN--RLVAVKIFPEQ---EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTAD-RMEYWLVTEF 289 (534)
T ss_pred HHhhcCccceeehhhccC--ceeEEEecCHH---HHHHHHhHHHHHhccCccchhHHHhhchhccCCcc-ccceeEEeee
Confidence 346899999999998864 58999999644 44778888888776 4799999999986544322 4467999999
Q ss_pred ccCCCCCCC--cccCCHHHHHHHHHHHHHHHHHHHhc------CCCCeEecCCCCCCeeeCCCCceEEecccCccccCcc
Q 041479 605 MHHGSLESC--PRILSFLRRLNIAIDVASALEYLHHH------CKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676 (771)
Q Consensus 605 ~~~g~L~~~--~~~l~~~~~~~i~~~ia~gL~~LH~~------~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~ 676 (771)
.+.|+|.++ ....+|.+..+|+.-+++||+|||+. .+++|+|||||+.|||+..|+.+.|+|||+|..+...
T Consensus 290 h~kGsL~dyL~~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~p~ 369 (534)
T KOG3653|consen 290 HPKGSLCDYLKANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLEPG 369 (534)
T ss_pred ccCCcHHHHHHhccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEEecCC
Confidence 999999988 44689999999999999999999974 4689999999999999999999999999999988765
Q ss_pred cCCcccccccccccccccchh---------------------HHHHHHHHHhCCC------------CCCccccCCcc--
Q 041479 677 MSSNQCSSVGLKGTVGYATPE---------------------YGILLLEIFTGKR------------PTSDMFTEGLD-- 721 (771)
Q Consensus 677 ~~~~~~~~~~~~gt~~y~aPE---------------------~Gv~l~el~tg~~------------P~~~~~~~~~~-- 721 (771)
.... ...+.+||.+||||| .|.|+||++++-. ||+........
T Consensus 370 ~~~~--d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e 447 (534)
T KOG3653|consen 370 KPQG--DTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLE 447 (534)
T ss_pred CCCc--chhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHH
Confidence 4432 233478999999999 4999999999633 22211111111
Q ss_pred -HHHHH-HhhCCCchhhhcCcc-----ccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 722 -LHNFV-KMALPDQILQVLDPL-----FLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 722 -~~~~~-~~~~~~~~~~~~~~~-----~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
+.+.+ ..+.++.+++.+-.. +....+.||..||+.|.|+.-|-+++.++
T Consensus 448 ~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l 503 (534)
T KOG3653|consen 448 EMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAEL 503 (534)
T ss_pred HHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHH
Confidence 22222 222223333222211 11344599999999999999999988775
No 58
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=99.98 E-value=5.3e-32 Score=290.39 Aligned_cols=223 Identities=22% Similarity=0.242 Sum_probs=177.3
Q ss_pred cccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEe
Q 041479 528 SYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEF 604 (771)
Q Consensus 528 ~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~ 604 (771)
.+|+|.+|+||+++.+.+++.||+|++.... ......+.+|++++++++||||+++++++...+ ..|+||||
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~-----~~~lv~E~ 76 (323)
T cd05595 2 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHD-----RLCFVMEY 76 (323)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCC-----EEEEEEeC
Confidence 3789999999999999888899999997542 334567889999999999999999999987766 78999999
Q ss_pred ccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCcc
Q 041479 605 MHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQ 681 (771)
Q Consensus 605 ~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 681 (771)
+++|+|... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 77 ~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~---- 149 (323)
T cd05595 77 ANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG---- 149 (323)
T ss_pred CCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEcCCCCEEecccHHhccccCCC----
Confidence 999999655 34688999999999999999999985 99999999999999999999999999987532211
Q ss_pred cccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCccccccC
Q 041479 682 CSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFLVGG 746 (771)
Q Consensus 682 ~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 746 (771)
.......||+.|+||| +||++|||++|+.||.+.... .......... ...+..+++.+....
T Consensus 150 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~-~~~~~~~~~~--~~~p~~~~~~~~~li 226 (323)
T cd05595 150 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-RLFELILMEE--IRFPRTLSPEAKSLL 226 (323)
T ss_pred CccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHH-HHHHHHhcCC--CCCCCCCCHHHHHHH
Confidence 1122356999999999 699999999999999643111 1111111111 223344566666677
Q ss_pred cccChhchhhcC-----CHHHHHH
Q 041479 747 VQEGEETAEENI-----KKGQIRE 765 (771)
Q Consensus 747 ~~cl~~~p~~Rp-----t~~~vl~ 765 (771)
.+||..||++|| ++.++++
T Consensus 227 ~~~L~~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 227 AGLLKKDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred HHHccCCHHHhCCCCCCCHHHHHc
Confidence 799999999998 7888764
No 59
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=99.98 E-value=5.8e-32 Score=290.90 Aligned_cols=228 Identities=20% Similarity=0.230 Sum_probs=181.6
Q ss_pred cccccccccccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCce
Q 041479 520 RKDLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNY 596 (771)
Q Consensus 520 ~~~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~ 596 (771)
..++.....+|+|.+|+||+|+++.+++.||||++.... ....+.+.+|+.++++++||||+++++++.+.+
T Consensus 17 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~----- 91 (329)
T PTZ00263 17 LSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDEN----- 91 (329)
T ss_pred chheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCC-----
Confidence 344555667899999999999999999999999996542 234567899999999999999999999988776
Q ss_pred eEEEEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCcccc
Q 041479 597 FRALVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673 (771)
Q Consensus 597 ~~~lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~ 673 (771)
..|+||||+++|+|.+. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 92 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~ 168 (329)
T PTZ00263 92 RVYFLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLDNKGHVKVTDFGFAKKV 168 (329)
T ss_pred EEEEEEcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEECCCCCEEEeeccCceEc
Confidence 78999999999999765 34578888899999999999999986 8999999999999999999999999999865
Q ss_pred CcccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhc
Q 041479 674 PEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVL 738 (771)
Q Consensus 674 ~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 738 (771)
.... ...+||+.|+||| +||++|||++|+.||.+... ....+..... ....+..+
T Consensus 169 ~~~~-------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~--~~~~~~i~~~-~~~~p~~~ 238 (329)
T PTZ00263 169 PDRT-------FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTP--FRIYEKILAG-RLKFPNWF 238 (329)
T ss_pred CCCc-------ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCH--HHHHHHHhcC-CcCCCCCC
Confidence 4321 1246899999999 69999999999999965321 1111111111 12233445
Q ss_pred CccccccCcccChhchhhcCC-----HHHHHH
Q 041479 739 DPLFLVGGVQEGEETAEENIK-----KGQIRE 765 (771)
Q Consensus 739 ~~~~~~~~~~cl~~~p~~Rpt-----~~~vl~ 765 (771)
+..+.....+||+.||++||+ +.+++.
T Consensus 239 ~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 270 (329)
T PTZ00263 239 DGRARDLVKGLLQTDHTKRLGTLKGGVADVKN 270 (329)
T ss_pred CHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 666666777999999999997 577663
No 60
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.98 E-value=6.3e-32 Score=289.18 Aligned_cols=236 Identities=20% Similarity=0.259 Sum_probs=183.9
Q ss_pred cccccccccccccceEEEEEecCCCe----EEEEEEeeccc-hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCce
Q 041479 522 DLLLNVSYESLVKATVYKGILDLDQT----FIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNY 596 (771)
Q Consensus 522 ~~~~~~~l~~~~~~~Vy~~~~~~~~~----~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~ 596 (771)
++.....+|+|.+|+||+|++..+++ .||||++.... ....+++..|+.+++.++||||++++|+|....
T Consensus 8 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~~----- 82 (316)
T cd05108 8 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST----- 82 (316)
T ss_pred hceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCCC-----
Confidence 34455678999999999999866554 38999986442 345678999999999999999999999987643
Q ss_pred eEEEEEEeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccc
Q 041479 597 FRALVYEFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRF 672 (771)
Q Consensus 597 ~~~lv~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~ 672 (771)
.++|+||+++|+|.++ ...+++.....++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.
T Consensus 83 -~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~Nill~~~~~~kl~DfG~a~~ 158 (316)
T cd05108 83 -VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVLVKTPQHVKITDFGLAKL 158 (316)
T ss_pred -ceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEecCCCcEEEcccccccc
Confidence 5799999999999765 33578888999999999999999985 899999999999999999999999999987
Q ss_pred cCcccCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhh
Q 041479 673 IPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQ 736 (771)
Q Consensus 673 ~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 736 (771)
....... ....+..++..|+||| |||++||+++ |+.||.+.... .+.++.........+.
T Consensus 159 ~~~~~~~--~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~--~~~~~~~~~~~~~~~~ 234 (316)
T cd05108 159 LGADEKE--YHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EISSILEKGERLPQPP 234 (316)
T ss_pred ccCCCcc--eeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHhCCCCCCCCC
Confidence 6543221 1112233567899999 6999999998 99999764221 2333333333222333
Q ss_pred hcCccccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 737 VLDPLFLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 737 ~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
..+..+...+.+||..+|++|||+.+++..+.++
T Consensus 235 ~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~ 268 (316)
T cd05108 235 ICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 268 (316)
T ss_pred CCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 4455555667799999999999999999998765
No 61
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.98 E-value=5.1e-34 Score=269.39 Aligned_cols=226 Identities=21% Similarity=0.278 Sum_probs=183.9
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEE
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYE 603 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e 603 (771)
...+|+|.|+.||++.++.+++.+|+|++.... ....+++.+|++|.+.++|||||+|.+.+.+.+ +.|+|+|
T Consensus 16 ~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~-----~~ylvFe 90 (355)
T KOG0033|consen 16 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEES-----FHYLVFD 90 (355)
T ss_pred HHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccc-----eeEEEEe
Confidence 456899999999999999999999999996542 346688999999999999999999999877666 7899999
Q ss_pred eccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCC---CCceEEecccCccccCccc
Q 041479 604 FMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN---DMTAHMGDFGLTRFIPEVM 677 (771)
Q Consensus 604 ~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~---~~~~kl~DfGla~~~~~~~ 677 (771)
+|+||+|..- ....++..+-+++.||++||.|+|.. +|||||+||+|+++.+ ..-+|++|||+|..+..
T Consensus 91 ~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~-- 165 (355)
T KOG0033|consen 91 LVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSN---GIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVND-- 165 (355)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeeeeccCCCceeecccceEEEeCC--
Confidence 9999999432 23457777889999999999999996 9999999999999954 34699999999987763
Q ss_pred CCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhC--CCchhhhcCc
Q 041479 678 SSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMAL--PDQILQVLDP 740 (771)
Q Consensus 678 ~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 740 (771)
.....+.+|||+||||| -||++|-++.|..||.+..... .+.++..+.+ +.+..+.+.+
T Consensus 166 ---g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~~r-lye~I~~g~yd~~~~~w~~is~ 241 (355)
T KOG0033|consen 166 ---GEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHR-LYEQIKAGAYDYPSPEWDTVTP 241 (355)
T ss_pred ---ccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccHHH-HHHHHhccccCCCCcccCcCCH
Confidence 23455788999999999 4999999999999997632221 2334444443 3445666777
Q ss_pred cccccCcccChhchhhcCCHHHHHH
Q 041479 741 LFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 741 ~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
.-+....+|+..||++|.|+.|++.
T Consensus 242 ~Ak~LvrrML~~dP~kRIta~EAL~ 266 (355)
T KOG0033|consen 242 EAKSLIRRMLTVNPKKRITADEALK 266 (355)
T ss_pred HHHHHHHHHhccChhhhccHHHHhC
Confidence 7766777999999999999999874
No 62
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=3.6e-32 Score=292.61 Aligned_cols=223 Identities=24% Similarity=0.286 Sum_probs=178.0
Q ss_pred cccccccccccccceEEEEEecCCCeEEEEEEeecc---chhhHHHHHHHHHHHhccC-CCCceeEEEEeecCCCCCcee
Q 041479 522 DLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLH---QRGALKSFMAECQALRNIR-HRNLVKIITACSTSDFQGNYF 597 (771)
Q Consensus 522 ~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~~~~ 597 (771)
++...-.+|.|.||+|+.+..+.+++.||||+++.. ..++++..+.|.+|+.... ||.++.++..|.+.+ +
T Consensus 369 ~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~-----~ 443 (694)
T KOG0694|consen 369 DFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKE-----H 443 (694)
T ss_pred ceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCC-----e
Confidence 344445689999999999999999999999999766 3567889999999998885 999999999977766 8
Q ss_pred EEEEEEeccCCCCCCC--cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCc
Q 041479 598 RALVYEFMHHGSLESC--PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPE 675 (771)
Q Consensus 598 ~~lv~e~~~~g~L~~~--~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~ 675 (771)
.|+||||+.|||+..+ .+.+++.++..|+.+|+.||+|||+. +|||||||-+|||+|.+|.+||+|||+++.-..
T Consensus 444 l~fvmey~~Ggdm~~~~~~~~F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~ 520 (694)
T KOG0694|consen 444 LFFVMEYVAGGDLMHHIHTDVFSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMG 520 (694)
T ss_pred EEEEEEecCCCcEEEEEecccccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEcccCcEEecccccccccCC
Confidence 9999999999997655 46799999999999999999999996 999999999999999999999999999985332
Q ss_pred ccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHH-HHHhhCCCchhhhcC
Q 041479 676 VMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHN-FVKMALPDQILQVLD 739 (771)
Q Consensus 676 ~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 739 (771)
.+ ....++||||.||||| |||++|||+.|+.||.+. ++.++.+ ++.-... .+..++
T Consensus 521 ~g----~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gd--dEee~FdsI~~d~~~--yP~~ls 592 (694)
T KOG0694|consen 521 QG----DRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGD--DEEEVFDSIVNDEVR--YPRFLS 592 (694)
T ss_pred CC----CccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCC--CHHHHHHHHhcCCCC--CCCccc
Confidence 22 2345689999999999 799999999999999752 2222222 2221111 122223
Q ss_pred ccccccCcccChhchhhcCCH
Q 041479 740 PLFLVGGVQEGEETAEENIKK 760 (771)
Q Consensus 740 ~~~~~~~~~cl~~~p~~Rpt~ 760 (771)
.+...++.+.+.++|++|.-+
T Consensus 593 ~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 593 KEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred HHHHHHHHHHhccCcccccCC
Confidence 333344558889999999865
No 63
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=99.98 E-value=6.7e-32 Score=290.14 Aligned_cols=223 Identities=23% Similarity=0.242 Sum_probs=177.5
Q ss_pred cccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEe
Q 041479 528 SYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEF 604 (771)
Q Consensus 528 ~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~ 604 (771)
.+|+|.+|+||+++.+.+++.||||++.... ......+.+|+++++.++||||+++++++.+.+ ..|+||||
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-----~~~lv~Ey 76 (328)
T cd05593 2 LLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKD-----RLCFVMEY 76 (328)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCC-----EEEEEEeC
Confidence 3689999999999999999999999996542 334568889999999999999999999988776 78999999
Q ss_pred ccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCcc
Q 041479 605 MHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQ 681 (771)
Q Consensus 605 ~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 681 (771)
+++|+|... ...+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 77 ~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~---- 149 (328)
T cd05593 77 VNGGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDA---- 149 (328)
T ss_pred CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeEECCCCcEEEecCcCCccCCCcc----
Confidence 999999655 34688999999999999999999985 99999999999999999999999999987532211
Q ss_pred cccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCccccccC
Q 041479 682 CSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFLVGG 746 (771)
Q Consensus 682 ~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 746 (771)
......+||+.|+||| +||++|||++|+.||.+... ....+.... .....+..+++.+....
T Consensus 150 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~--~~~~~~~~~-~~~~~p~~~~~~~~~li 226 (328)
T cd05593 150 ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--EKLFELILM-EDIKFPRTLSADAKSLL 226 (328)
T ss_pred cccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCH--HHHHHHhcc-CCccCCCCCCHHHHHHH
Confidence 1122356999999999 69999999999999964211 111111111 11223344555666667
Q ss_pred cccChhchhhcC-----CHHHHHH
Q 041479 747 VQEGEETAEENI-----KKGQIRE 765 (771)
Q Consensus 747 ~~cl~~~p~~Rp-----t~~~vl~ 765 (771)
.+|+++||++|| ++.++++
T Consensus 227 ~~~L~~dP~~R~~~~~~~~~~il~ 250 (328)
T cd05593 227 SGLLIKDPNKRLGGGPDDAKEIMR 250 (328)
T ss_pred HHHcCCCHHHcCCCCCCCHHHHhc
Confidence 799999999997 8888875
No 64
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.98 E-value=9.6e-32 Score=279.84 Aligned_cols=234 Identities=22% Similarity=0.325 Sum_probs=187.0
Q ss_pred cccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEE
Q 041479 524 LLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYE 603 (771)
Q Consensus 524 ~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e 603 (771)
.....+|+|.+|+||+|.++..++.||+|.+.... ...+++.+|++++++++||||+++++++...+ ..++|||
T Consensus 9 ~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~lv~e 82 (263)
T cd05052 9 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP-----PFYIITE 82 (263)
T ss_pred EEeeecCCcccceEEEEEEecCCceEEEEEecCCc-hHHHHHHHHHHHHHhCCCCChhheEEEEcCCC-----CcEEEEE
Confidence 34456899999999999999888899999986433 34578999999999999999999999987766 6799999
Q ss_pred eccCCCCCCC-----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccC
Q 041479 604 FMHHGSLESC-----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMS 678 (771)
Q Consensus 604 ~~~~g~L~~~-----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 678 (771)
|+++|+|.++ ...+++..+..++.|+++||+|||+. +++||||||+||++++++.+||+|||+++.......
T Consensus 83 ~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~ 159 (263)
T cd05052 83 FMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY 159 (263)
T ss_pred eCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCcEEeCCCcccccccccee
Confidence 9999999765 23578899999999999999999985 899999999999999999999999999986543221
Q ss_pred Ccccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhhhcCccc
Q 041479 679 SNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLF 742 (771)
Q Consensus 679 ~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 742 (771)
.......+++.|+||| |||++|||++ |..||.+.. .....+......+...+..+++.+
T Consensus 160 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 234 (263)
T cd05052 160 ---TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID--LSQVYELLEKGYRMERPEGCPPKV 234 (263)
T ss_pred ---eccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCC--HHHHHHHHHCCCCCCCCCCCCHHH
Confidence 1111223467899999 6999999998 999986531 122333333333334444556666
Q ss_pred cccCcccChhchhhcCCHHHHHHHHHHhC
Q 041479 743 LVGGVQEGEETAEENIKKGQIRESLIAIL 771 (771)
Q Consensus 743 ~~~~~~cl~~~p~~Rpt~~~vl~~L~~~l 771 (771)
.....+||..+|++|||+.++++.|+.++
T Consensus 235 ~~li~~cl~~~p~~Rp~~~~l~~~l~~~~ 263 (263)
T cd05052 235 YELMRACWQWNPSDRPSFAEIHQAFETMF 263 (263)
T ss_pred HHHHHHHccCCcccCCCHHHHHHHHHhhC
Confidence 67777999999999999999999999874
No 65
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=99.98 E-value=4.4e-33 Score=266.88 Aligned_cols=229 Identities=22% Similarity=0.252 Sum_probs=186.9
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccc--------hhhHHHHHHHHHHHhcc-CCCCceeEEEEeecCCCC
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--------RGALKSFMAECQALRNI-RHRNLVKIITACSTSDFQ 593 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--------~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~ 593 (771)
......+|.|..++|.++.++.+++.+|+|++.... ..-.+.-.+|+.|++++ .||+|+.+.++|.+..
T Consensus 19 y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~s-- 96 (411)
T KOG0599|consen 19 YEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDA-- 96 (411)
T ss_pred cChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcc--
Confidence 344556788999999999999999999999996543 12345678899999998 4999999999988877
Q ss_pred CceeEEEEEEeccCCCCCCCc---ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCc
Q 041479 594 GNYFRALVYEFMHHGSLESCP---RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLT 670 (771)
Q Consensus 594 ~~~~~~lv~e~~~~g~L~~~~---~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla 670 (771)
+.++|+|.|+.|.|.++. -.+++.+..+|+.|+..|++|||.. .|||||+||+|||+|++..+||+|||+|
T Consensus 97 ---F~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~---~IVHRDLKpENILlddn~~i~isDFGFa 170 (411)
T KOG0599|consen 97 ---FVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHAR---NIVHRDLKPENILLDDNMNIKISDFGFA 170 (411)
T ss_pred ---hhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHh---hhhhcccChhheeeccccceEEecccee
Confidence 689999999999999883 3588999999999999999999985 8999999999999999999999999999
Q ss_pred cccCcccCCcccccccccccccccchh---------------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhh
Q 041479 671 RFIPEVMSSNQCSSVGLKGTVGYATPE---------------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMA 729 (771)
Q Consensus 671 ~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~ 729 (771)
..+.+... ....||||+|.||| .||++|-++.|-+||-.-- .-..+..+..+.
T Consensus 171 ~~l~~Gek-----LrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRk-QmlMLR~ImeGk 244 (411)
T KOG0599|consen 171 CQLEPGEK-----LRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRK-QMLMLRMIMEGK 244 (411)
T ss_pred eccCCchh-----HHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHH-HHHHHHHHHhcc
Confidence 98766432 33578999999999 4999999999999984311 011234444555
Q ss_pred CC--CchhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 730 LP--DQILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 730 ~~--~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
+. .+.++-++...+....+|++.||++|.|++|+++
T Consensus 245 yqF~speWadis~~~KdLIsrlLqVdp~~Ritake~La 282 (411)
T KOG0599|consen 245 YQFRSPEWADISATVKDLISRLLQVDPTKRITAKEALA 282 (411)
T ss_pred cccCCcchhhccccHHHHHHHHHeeCchhcccHHHHhc
Confidence 54 3344455556666777999999999999999985
No 66
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.98 E-value=4.8e-32 Score=281.33 Aligned_cols=229 Identities=31% Similarity=0.381 Sum_probs=176.1
Q ss_pred ccccccccceEEEEEec----CCCeEEEEEEeeccc-hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEE
Q 041479 527 VSYESLVKATVYKGILD----LDQTFIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALV 601 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~----~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv 601 (771)
..+|+|.+|.||+|.+. ..+..||||.+.... ....+.|.+|++.+++++||||++++|++...+ ..++|
T Consensus 5 ~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~-----~~~lv 79 (259)
T PF07714_consen 5 KQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENE-----PLFLV 79 (259)
T ss_dssp EEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSS-----SEEEE
T ss_pred eEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccc-----ccccc
Confidence 46899999999999998 445789999996543 344789999999999999999999999998555 57999
Q ss_pred EEeccCCCCCCC-----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcc
Q 041479 602 YEFMHHGSLESC-----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676 (771)
Q Consensus 602 ~e~~~~g~L~~~-----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~ 676 (771)
|||+++|+|.++ ...+++..+..|+.|+|.||+|||+. +|+|+||+++||++++++.+||+|||+++.....
T Consensus 80 ~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~ 156 (259)
T PF07714_consen 80 MEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEK 156 (259)
T ss_dssp EE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEETTTEEEEESTTTGEETTTS
T ss_pred ccccccccccccccccccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccc
Confidence 999999999776 24688999999999999999999985 8999999999999999999999999999866322
Q ss_pred cCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhhhcCc
Q 041479 677 MSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQVLDP 740 (771)
Q Consensus 677 ~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 740 (771)
.. ........+...|+||| ||+++||+++ |+.||.+... ..+.+......+...+..++.
T Consensus 157 ~~--~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 232 (259)
T PF07714_consen 157 SK--YKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDN--EEIIEKLKQGQRLPIPDNCPK 232 (259)
T ss_dssp SS--EEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCH--HHHHHHHHTTEETTSBTTSBH
T ss_pred cc--ccccccccccccccccccccccccccccccccccccccccccccccccccccc--ccccccccccccceeccchhH
Confidence 11 11122234678899999 7999999999 7899876522 223333333333334555566
Q ss_pred cccccCcccChhchhhcCCHHHHHHHH
Q 041479 741 LFLVGGVQEGEETAEENIKKGQIRESL 767 (771)
Q Consensus 741 ~~~~~~~~cl~~~p~~Rpt~~~vl~~L 767 (771)
.+...+..||..||++|||+.++++.|
T Consensus 233 ~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 233 DIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp HHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred HHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 676777899999999999999999886
No 67
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.98 E-value=8.6e-32 Score=295.38 Aligned_cols=236 Identities=25% Similarity=0.275 Sum_probs=183.4
Q ss_pred ccccccccccceEEEEEecCC-----CeEEEEEEeeccc-hhhHHHHHHHHHHHhccC-CCCceeEEEEeecCCCCCcee
Q 041479 525 LNVSYESLVKATVYKGILDLD-----QTFIAVKVLFLHQ-RGALKSFMAECQALRNIR-HRNLVKIITACSTSDFQGNYF 597 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~~-----~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~~~~ 597 (771)
....+|+|.+|+||+|++... ...||||++.... ....+.+.+|+++++++. |||||+++++|.+.+ .
T Consensus 41 ~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~-----~ 115 (400)
T cd05105 41 LGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSG-----P 115 (400)
T ss_pred hhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCC-----c
Confidence 345689999999999987432 3479999996543 344578999999999996 999999999997766 6
Q ss_pred EEEEEEeccCCCCCCCc---------------------------------------------------------------
Q 041479 598 RALVYEFMHHGSLESCP--------------------------------------------------------------- 614 (771)
Q Consensus 598 ~~lv~e~~~~g~L~~~~--------------------------------------------------------------- 614 (771)
.|+|||||++|+|.++.
T Consensus 116 ~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (400)
T cd05105 116 IYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIK 195 (400)
T ss_pred eEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhh
Confidence 89999999999985430
Q ss_pred ------------------------------------ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCC
Q 041479 615 ------------------------------------RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN 658 (771)
Q Consensus 615 ------------------------------------~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~ 658 (771)
+.+++.++..++.|++.||+|||+. +|+||||||+||+++.
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dikp~Nill~~ 272 (400)
T cd05105 196 EASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK---NCVHRDLAARNVLLAQ 272 (400)
T ss_pred hhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHhEEEeC
Confidence 1367778899999999999999985 8999999999999999
Q ss_pred CCceEEecccCccccCcccCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccH
Q 041479 659 DMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDL 722 (771)
Q Consensus 659 ~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~ 722 (771)
++.+|++|||+++....... ........+++.||||| |||++|||++ |..||.+..... .+
T Consensus 273 ~~~~kL~DfGla~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~-~~ 349 (400)
T cd05105 273 GKIVKICDFGLARDIMHDSN--YVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDS-TF 349 (400)
T ss_pred CCEEEEEeCCcceecccccc--ccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhH-HH
Confidence 99999999999986543221 11122335678899999 6999999997 999997643222 23
Q ss_pred HHHHHhhCCCchhhhcCccccccCcccChhchhhcCCHHHHHHHHHHhC
Q 041479 723 HNFVKMALPDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAIL 771 (771)
Q Consensus 723 ~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~l 771 (771)
........+...+..+++.+...+.+||+.||++|||+.+|.+.|++++
T Consensus 350 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~ 398 (400)
T cd05105 350 YNKIKSGYRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLL 398 (400)
T ss_pred HHHHhcCCCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHc
Confidence 3333333333334445556666777999999999999999999999864
No 68
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.98 E-value=1e-31 Score=289.33 Aligned_cols=177 Identities=24% Similarity=0.320 Sum_probs=152.8
Q ss_pred ccccccccccceEEEEEecCCCeEEEEEEeeccc-hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEE
Q 041479 525 LNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYE 603 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e 603 (771)
....+|+|.+|.||+++++.++..||+|.+.... ....+++.+|++++++++||||+++++++...+ ..++|||
T Consensus 9 ~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~~lv~e 83 (331)
T cd06649 9 RISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG-----EISICME 83 (331)
T ss_pred EEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECC-----EEEEEee
Confidence 3456899999999999999999999999997653 344578999999999999999999999988776 7899999
Q ss_pred eccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCc
Q 041479 604 FMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSN 680 (771)
Q Consensus 604 ~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 680 (771)
|+++|+|.++ ...+++..+..++.|++.||.|||+. .+|+||||||+||+++.++.+||+|||+++......
T Consensus 84 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~--~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--- 158 (331)
T cd06649 84 HMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREK--HQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--- 158 (331)
T ss_pred cCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhc--CCEEcCCCChhhEEEcCCCcEEEccCcccccccccc---
Confidence 9999999876 34578889999999999999999984 369999999999999999999999999997653321
Q ss_pred ccccccccccccccchh---------------HHHHHHHHHhCCCCCCc
Q 041479 681 QCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSD 714 (771)
Q Consensus 681 ~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~ 714 (771)
.....||+.|+||| +||++|||++|+.||..
T Consensus 159 ---~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~ 204 (331)
T cd06649 159 ---ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPP 204 (331)
T ss_pred ---cccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 12346899999999 69999999999999954
No 69
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2e-33 Score=295.67 Aligned_cols=233 Identities=21% Similarity=0.246 Sum_probs=194.9
Q ss_pred cccccccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEE
Q 041479 520 RKDLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRA 599 (771)
Q Consensus 520 ~~~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 599 (771)
..-|...+.+|+|+||.||||+.++++-..|-|+|........++|+.||+|++.+.||+||+|++.|+..+ .++
T Consensus 31 ~d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~en-----kLw 105 (1187)
T KOG0579|consen 31 RDHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFEN-----KLW 105 (1187)
T ss_pred HHHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccC-----ceE
Confidence 344566788999999999999999999888999998888888999999999999999999999999988776 689
Q ss_pred EEEEeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCc
Q 041479 600 LVYEFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPE 675 (771)
Q Consensus 600 lv~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~ 675 (771)
|..|||.||-.+.. .+.+.+.++.-++.|++.||.|||++ .|||||||+.|||+.-+|.++++|||.+.....
T Consensus 106 iliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~ 182 (1187)
T KOG0579|consen 106 ILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNILLTLDGDIRLADFGVSAKNKS 182 (1187)
T ss_pred EEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceEEEecCcEeeecccccccchh
Confidence 99999999988655 67899999999999999999999997 899999999999999999999999999753322
Q ss_pred ccCCcccccccccccccccchh--------------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCC-ch
Q 041479 676 VMSSNQCSSVGLKGTVGYATPE--------------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPD-QI 734 (771)
Q Consensus 676 ~~~~~~~~~~~~~gt~~y~aPE--------------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~-~~ 734 (771)
......++.|||+||||| ||+++.||..+.+|..+....- .+.++.+...|. ..
T Consensus 183 ----t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMR-VllKiaKSePPTLlq 257 (1187)
T KOG0579|consen 183 ----TRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMR-VLLKIAKSEPPTLLQ 257 (1187)
T ss_pred ----HHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHH-HHHHHhhcCCCcccC
Confidence 123345688999999999 6999999999999987754433 244555555552 23
Q ss_pred hhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 735 LQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 735 ~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
+..+...+.+...+|+.++|..||+++++++
T Consensus 258 PS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 258 PSHWSRSFSDFLKRCLVKNPRNRPPAAQLLK 288 (1187)
T ss_pred cchhhhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence 4445555556667999999999999999875
No 70
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.97 E-value=1.6e-31 Score=281.26 Aligned_cols=236 Identities=23% Similarity=0.326 Sum_probs=186.3
Q ss_pred ccccccccccccceEEEEEecCCC-----eEEEEEEeeccc-hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCce
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQ-----TFIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNY 596 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~-----~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~ 596 (771)
+.....+|+|.+|.||+|.....+ ..||+|.+.... ....++|.+|++++++++||||+++++++....
T Consensus 7 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~----- 81 (283)
T cd05048 7 VRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQ----- 81 (283)
T ss_pred cchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCC-----
Confidence 334556899999999999876554 689999986443 344567999999999999999999999987665
Q ss_pred eEEEEEEeccCCCCCCCc-------------------ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeC
Q 041479 597 FRALVYEFMHHGSLESCP-------------------RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD 657 (771)
Q Consensus 597 ~~~lv~e~~~~g~L~~~~-------------------~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~ 657 (771)
..+++|||+++|+|.++. ..+++.++..++.|++.||+|||+. +|+||||||+||+++
T Consensus 82 ~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nil~~ 158 (283)
T cd05048 82 PTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---HFVHRDLAARNCLVG 158 (283)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccccceEEEc
Confidence 679999999999986551 3477888999999999999999985 899999999999999
Q ss_pred CCCceEEecccCccccCcccCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCcc
Q 041479 658 NDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLD 721 (771)
Q Consensus 658 ~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~ 721 (771)
+++.+||+|||+++....... ........+++.|+||| +||++|||++ |..||.+... ..
T Consensus 159 ~~~~~~L~dfg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~--~~ 234 (283)
T cd05048 159 EGLTVKISDFGLSRDIYSADY--YRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSN--QE 234 (283)
T ss_pred CCCcEEECCCcceeecccccc--ccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCH--HH
Confidence 999999999999976533221 11122345688999999 6999999998 9999975432 22
Q ss_pred HHHHHHhhCCCchhhhcCccccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 722 LHNFVKMALPDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 722 ~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
+.+..........+..+.+.+..+..+||+.||++|||+.||++.|+++
T Consensus 235 ~~~~i~~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~~ 283 (283)
T cd05048 235 VIEMIRSRQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRSW 283 (283)
T ss_pred HHHHHHcCCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhcC
Confidence 3344433333334445566666777899999999999999999999864
No 71
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=99.97 E-value=1.8e-32 Score=275.57 Aligned_cols=225 Identities=22% Similarity=0.282 Sum_probs=170.5
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEecc
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMH 606 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~~~ 606 (771)
--+|.|+||+||+|...++++.||||++....+. --+|+++|+++.|||||+|..+|......+..+..+|||||+
T Consensus 30 ~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~----knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVleymP 105 (364)
T KOG0658|consen 30 RLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRY----KNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEYMP 105 (364)
T ss_pred EEEeecccceEEEEEEcCCCceeEEEEecCCCCc----CcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHhch
Confidence 4479999999999999999899999999654331 236999999999999999999987665444456789999998
Q ss_pred CCCCCCC-------cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCC-CceEEecccCccccCcccC
Q 041479 607 HGSLESC-------PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDND-MTAHMGDFGLTRFIPEVMS 678 (771)
Q Consensus 607 ~g~L~~~-------~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~-~~~kl~DfGla~~~~~~~~ 678 (771)
. +|.+. .+.++...+.-+..|+.+||.|||+. +|+||||||+|+|+|.+ |.+||||||.|+.+.....
T Consensus 106 ~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~ep 181 (364)
T KOG0658|consen 106 E-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGEP 181 (364)
T ss_pred H-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcCCCCeEEeccCCcceeeccCCC
Confidence 6 66544 34677778889999999999999985 99999999999999965 9999999999998766543
Q ss_pred Ccccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHh-hCC--Cc------
Q 041479 679 SNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKM-ALP--DQ------ 733 (771)
Q Consensus 679 ~~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~-~~~--~~------ 733 (771)
. .+...|+.|+||| .|||+.||+.|++-|.+..+ ...+.++++. +.| ++
T Consensus 182 n-----iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~-~dQL~eIik~lG~Pt~e~I~~mn~ 255 (364)
T KOG0658|consen 182 N-----ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSS-VDQLVEIIKVLGTPTREDIKSMNP 255 (364)
T ss_pred c-----eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCH-HHHHHHHHHHhCCCCHHHHhhcCc
Confidence 3 2345799999999 39999999999998865321 1123332221 111 01
Q ss_pred ------------------hhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 734 ------------------ILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 734 ------------------~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
.....+++..+...++++.+|.+|.++.|+++
T Consensus 256 ~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~ 305 (364)
T KOG0658|consen 256 NYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALA 305 (364)
T ss_pred ccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhc
Confidence 11112222223344999999999999999875
No 72
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.97 E-value=2.6e-31 Score=275.59 Aligned_cols=231 Identities=23% Similarity=0.284 Sum_probs=181.7
Q ss_pred cccccccceEEEEEec--CCCeEEEEEEeeccc-hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEe
Q 041479 528 SYESLVKATVYKGILD--LDQTFIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEF 604 (771)
Q Consensus 528 ~l~~~~~~~Vy~~~~~--~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~ 604 (771)
.+|+|.+|.||+|+++ .++..||||++.... ....+.|.+|++++++++||||+++++++... ..++||||
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~------~~~lv~e~ 75 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEAE------ALMLVMEM 75 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcCC------CeEEEEEe
Confidence 4799999999999875 445579999996553 33456799999999999999999999987543 46899999
Q ss_pred ccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCc
Q 041479 605 MHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSN 680 (771)
Q Consensus 605 ~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 680 (771)
+++|+|.++ ...+++.++.+++.|++.|++|||+. +++||||||+||+++.++.+|++|||+++.........
T Consensus 76 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~ 152 (257)
T cd05115 76 ASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYY 152 (257)
T ss_pred CCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhc---CeeecccchheEEEcCCCcEEeccCCccccccCCccce
Confidence 999999875 33588999999999999999999985 89999999999999999999999999998654332211
Q ss_pred ccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhhhcCccccc
Q 041479 681 QCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFLV 744 (771)
Q Consensus 681 ~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 744 (771)
.......+++.|+||| |||++||+++ |..||.+... ......+....+...+....+.+..
T Consensus 153 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~ 229 (257)
T cd05115 153 -KARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKG--PEVMSFIEQGKRLDCPAECPPEMYA 229 (257)
T ss_pred -eccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCH--HHHHHHHHCCCCCCCCCCCCHHHHH
Confidence 1112223467899999 6999999997 9999976432 2233444443433444455566666
Q ss_pred cCcccChhchhhcCCHHHHHHHHHHh
Q 041479 745 GGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 745 ~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
...+||..+|++||++.+|.+.|+.+
T Consensus 230 li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 230 LMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred HHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 77799999999999999999999864
No 73
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.2e-32 Score=289.27 Aligned_cols=237 Identities=23% Similarity=0.336 Sum_probs=199.1
Q ss_pred cccccccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEE
Q 041479 520 RKDLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRA 599 (771)
Q Consensus 520 ~~~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 599 (771)
+.+....-.+|-|.+|.||.|+|+...-.||||.++. +....++|++|+.+|+.++|||+|+|+|+|.... ..|
T Consensus 266 RtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKE-DtMeveEFLkEAAvMKeikHpNLVqLLGVCT~Ep-----PFY 339 (1157)
T KOG4278|consen 266 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEP-----PFY 339 (1157)
T ss_pred chheeeeeccCCCcccceeeeeeeccceeeehhhhhh-cchhHHHHHHHHHHHHhhcCccHHHHhhhhccCC-----CeE
Confidence 3455667789999999999999999999999999954 4456799999999999999999999999998765 579
Q ss_pred EEEEeccCCCCCCCc-----ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccC
Q 041479 600 LVYEFMHHGSLESCP-----RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIP 674 (771)
Q Consensus 600 lv~e~~~~g~L~~~~-----~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~ 674 (771)
||.|||.+|+|.++. ..++.-..+.++.||+.|++||.. +.+|||||.++|+|+.++..+||+|||+++++.
T Consensus 340 IiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEk---knFIHRDLAARNCLVgEnhiVKvADFGLsRlMt 416 (1157)
T KOG4278|consen 340 IITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHIVKVADFGLSRLMT 416 (1157)
T ss_pred EEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHH---hhhhhhhhhhhhccccccceEEeeccchhhhhc
Confidence 999999999997762 345556678899999999999997 489999999999999999999999999999987
Q ss_pred cccCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhhhc
Q 041479 675 EVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQVL 738 (771)
Q Consensus 675 ~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 738 (771)
..... ...+..-...|.||| |||++||+.| |..||.++-- -..+..+...++-..++.+
T Consensus 417 gDTYT---AHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGidl--SqVY~LLEkgyRM~~PeGC 491 (1157)
T KOG4278|consen 417 GDTYT---AHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDL--SQVYGLLEKGYRMDGPEGC 491 (1157)
T ss_pred CCcee---cccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCccH--HHHHHHHhccccccCCCCC
Confidence 64422 122333467899999 8999999999 9999976522 2355666777776777888
Q ss_pred CccccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 739 DPLFLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 739 ~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
.+.+..++..||+++|++||+.+|+-+.++.+
T Consensus 492 PpkVYeLMraCW~WsPsDRPsFaeiHqafEtm 523 (1157)
T KOG4278|consen 492 PPKVYELMRACWNWSPSDRPSFAEIHQAFETM 523 (1157)
T ss_pred CHHHHHHHHHHhcCCcccCccHHHHHHHHHHH
Confidence 88888888899999999999999999998876
No 74
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=99.97 E-value=1.6e-31 Score=288.20 Aligned_cols=227 Identities=22% Similarity=0.225 Sum_probs=179.6
Q ss_pred ccccccccccccccceEEEEEecCCC-eEEEEEEeeccc---hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCce
Q 041479 521 KDLLLNVSYESLVKATVYKGILDLDQ-TFIAVKVLFLHQ---RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNY 596 (771)
Q Consensus 521 ~~~~~~~~l~~~~~~~Vy~~~~~~~~-~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~ 596 (771)
.++.....+|+|.+|+||+|+++.++ ..||||++.... ....+.+.+|+++++.++|||||++++++.+.+
T Consensus 30 ~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~----- 104 (340)
T PTZ00426 30 EDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDES----- 104 (340)
T ss_pred hhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCC-----
Confidence 34445567899999999999876654 689999996432 334567889999999999999999999998776
Q ss_pred eEEEEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCcccc
Q 041479 597 FRALVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673 (771)
Q Consensus 597 ~~~lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~ 673 (771)
..|+||||+++|+|.++ ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 105 ~~~lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~ 181 (340)
T PTZ00426 105 YLYLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLDKDGFIKMTDFGFAKVV 181 (340)
T ss_pred EEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEecCCCCeec
Confidence 78999999999999766 34688889999999999999999985 9999999999999999999999999999865
Q ss_pred CcccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhc
Q 041479 674 PEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVL 738 (771)
Q Consensus 674 ~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 738 (771)
.... ...+||+.||||| +||++|||++|+.||.+.... .......... ...+..+
T Consensus 182 ~~~~-------~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~-~~~~~i~~~~--~~~p~~~ 251 (340)
T PTZ00426 182 DTRT-------YTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPL-LIYQKILEGI--IYFPKFL 251 (340)
T ss_pred CCCc-------ceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHH-HHHHHHhcCC--CCCCCCC
Confidence 4321 2346999999999 699999999999999753211 1112222211 1233445
Q ss_pred CccccccCcccChhchhhcC-----CHHHHHH
Q 041479 739 DPLFLVGGVQEGEETAEENI-----KKGQIRE 765 (771)
Q Consensus 739 ~~~~~~~~~~cl~~~p~~Rp-----t~~~vl~ 765 (771)
++.......+|++.||++|+ |+.++++
T Consensus 252 ~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~ 283 (340)
T PTZ00426 252 DNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKE 283 (340)
T ss_pred CHHHHHHHHHHcccCHHHcCCCCCCCHHHHHc
Confidence 55555667799999999995 7888764
No 75
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=99.97 E-value=1.8e-31 Score=275.94 Aligned_cols=230 Identities=20% Similarity=0.272 Sum_probs=180.7
Q ss_pred cccccccceEEEEEecCCCeEEEEEEeeccc-hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEecc
Q 041479 528 SYESLVKATVYKGILDLDQTFIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMH 606 (771)
Q Consensus 528 ~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~~~ 606 (771)
.+|+|.+|+||+|+++.+++.||+|.+.... ......+.+|++++++++||||+++++++.... ..++||||++
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~lv~e~~~ 76 (252)
T cd05084 2 RIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQ-----PIYIVMELVQ 76 (252)
T ss_pred ccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCC-----CeEEEEeecc
Confidence 3789999999999999888899999885432 345578999999999999999999999987766 6799999999
Q ss_pred CCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCccc
Q 041479 607 HGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQC 682 (771)
Q Consensus 607 ~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 682 (771)
+++|.++ ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+|++|||+++........ .
T Consensus 77 ~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~--~ 151 (252)
T cd05084 77 GGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYA--S 151 (252)
T ss_pred CCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEEcCCCcEEECccccCccccccccc--c
Confidence 9999766 23578999999999999999999985 8999999999999999999999999998754432111 0
Q ss_pred ccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhhhcCccccccC
Q 041479 683 SSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFLVGG 746 (771)
Q Consensus 683 ~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 746 (771)
......++..|+||| +||++||+++ |..||...... ..........+...+...+..+....
T Consensus 152 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~li 229 (252)
T cd05084 152 TGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQ--QTREAIEQGVRLPCPELCPDAVYRLM 229 (252)
T ss_pred cCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHH--HHHHHHHcCCCCCCcccCCHHHHHHH
Confidence 011112345799999 6999999998 88888653221 12223333333334444555666677
Q ss_pred cccChhchhhcCCHHHHHHHHHH
Q 041479 747 VQEGEETAEENIKKGQIRESLIA 769 (771)
Q Consensus 747 ~~cl~~~p~~Rpt~~~vl~~L~~ 769 (771)
.+|++.+|++|||+.++++.|++
T Consensus 230 ~~~l~~~p~~Rps~~~~~~~l~~ 252 (252)
T cd05084 230 ERCWEYDPGQRPSFSTVHQELQS 252 (252)
T ss_pred HHHcCCChhhCcCHHHHHHHHhC
Confidence 79999999999999999999874
No 76
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=99.97 E-value=8.1e-32 Score=284.72 Aligned_cols=222 Identities=23% Similarity=0.258 Sum_probs=178.0
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEE
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
...+|+|.+|+||+|+.+.+++.||||++.... ....+.+.+|++++++++||||+++++++.+.+ ..|+||
T Consensus 6 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-----~~~lv~ 80 (291)
T cd05612 6 IKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQR-----FLYMLM 80 (291)
T ss_pred eeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCC-----eEEEEE
Confidence 345799999999999999888899999996542 234567889999999999999999999887665 789999
Q ss_pred EeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCC
Q 041479 603 EFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSS 679 (771)
Q Consensus 603 e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 679 (771)
||+++|+|.++ .+.+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 81 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~-- 155 (291)
T cd05612 81 EYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRT-- 155 (291)
T ss_pred eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEEecCcchhccCCc--
Confidence 99999999766 34678889999999999999999985 99999999999999999999999999998653321
Q ss_pred cccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCccccc
Q 041479 680 NQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFLV 744 (771)
Q Consensus 680 ~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 744 (771)
...+||+.|+||| +||++|||++|+.||.+..... ......... ...+..+++.+..
T Consensus 156 -----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~--~~~~~~~~~~~~~ 227 (291)
T cd05612 156 -----WTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFG-IYEKILAGK--LEFPRHLDLYAKD 227 (291)
T ss_pred -----ccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHhCC--cCCCccCCHHHHH
Confidence 2346899999999 6999999999999997532111 112222221 2233344666666
Q ss_pred cCcccChhchhhcCC-----HHHHHH
Q 041479 745 GGVQEGEETAEENIK-----KGQIRE 765 (771)
Q Consensus 745 ~~~~cl~~~p~~Rpt-----~~~vl~ 765 (771)
...+|++.||++||+ +.|+++
T Consensus 228 li~~~l~~dp~~R~~~~~~~~~~~l~ 253 (291)
T cd05612 228 LIKKLLVVDRTRRLGNMKNGADDVKN 253 (291)
T ss_pred HHHHHcCCCHHHccCCccCCHHHHhc
Confidence 777999999999995 777764
No 77
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=99.97 E-value=1e-31 Score=288.55 Aligned_cols=224 Identities=23% Similarity=0.255 Sum_probs=177.7
Q ss_pred cccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEe
Q 041479 528 SYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEF 604 (771)
Q Consensus 528 ~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~ 604 (771)
.+|+|.+|+||+++.+.+++.||+|++.... ......+..|+++++.++||||+++++++.+.+ ..|+||||
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~-----~~~lv~E~ 76 (325)
T cd05594 2 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHD-----RLCFVMEY 76 (325)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCC-----EEEEEEeC
Confidence 3799999999999999889999999997542 334567889999999999999999999987776 78999999
Q ss_pred ccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCcc
Q 041479 605 MHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQ 681 (771)
Q Consensus 605 ~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 681 (771)
+++|+|..+ ...+++.++..++.|++.||+|||+. .+|+||||||+||+++.++.+||+|||+++.......
T Consensus 77 ~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~--~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~--- 151 (325)
T cd05594 77 ANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA--- 151 (325)
T ss_pred CCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhc--CCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCc---
Confidence 999999665 34688999999999999999999973 3899999999999999999999999999875322111
Q ss_pred cccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCccccccC
Q 041479 682 CSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFLVGG 746 (771)
Q Consensus 682 ~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 746 (771)
......||+.||||| +||++|||++|+.||.+... ....+.... .....+..+++.+....
T Consensus 152 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~--~~~~~~i~~-~~~~~p~~~~~~~~~li 227 (325)
T cd05594 152 -TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--EKLFELILM-EEIRFPRTLSPEAKSLL 227 (325)
T ss_pred -ccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCH--HHHHHHHhc-CCCCCCCCCCHHHHHHH
Confidence 122346999999999 69999999999999964311 112222111 11223444566666677
Q ss_pred cccChhchhhcC-----CHHHHHH
Q 041479 747 VQEGEETAEENI-----KKGQIRE 765 (771)
Q Consensus 747 ~~cl~~~p~~Rp-----t~~~vl~ 765 (771)
.+|++.||++|+ ++.++++
T Consensus 228 ~~~L~~dP~~R~~~~~~~~~~il~ 251 (325)
T cd05594 228 SGLLKKDPKQRLGGGPDDAKEIMQ 251 (325)
T ss_pred HHHhhcCHHHhCCCCCCCHHHHhc
Confidence 799999999997 8888874
No 78
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.97 E-value=2.1e-31 Score=283.57 Aligned_cols=233 Identities=19% Similarity=0.242 Sum_probs=176.0
Q ss_pred ccccccccccceEEEEEecC----------------CCeEEEEEEeeccc-hhhHHHHHHHHHHHhccCCCCceeEEEEe
Q 041479 525 LNVSYESLVKATVYKGILDL----------------DQTFIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITAC 587 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~----------------~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~ 587 (771)
....+|+|.+|.||+|+++. ++..||||.+.... .....+|.+|++++.+++||||+++++++
T Consensus 9 ~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~ 88 (304)
T cd05096 9 FKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRLLGVC 88 (304)
T ss_pred eeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEEEEEE
Confidence 34458999999999998643 33479999986543 33456899999999999999999999999
Q ss_pred ecCCCCCceeEEEEEEeccCCCCCCCc----------------------ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeE
Q 041479 588 STSDFQGNYFRALVYEFMHHGSLESCP----------------------RILSFLRRLNIAIDVASALEYLHHHCKKPIV 645 (771)
Q Consensus 588 ~~~~~~~~~~~~lv~e~~~~g~L~~~~----------------------~~l~~~~~~~i~~~ia~gL~~LH~~~~~~iv 645 (771)
.+.+ ..++||||+++|+|.++. ..+++..+..++.|++.||+|||+. +|+
T Consensus 89 ~~~~-----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~iv 160 (304)
T cd05096 89 VDED-----PLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL---NFV 160 (304)
T ss_pred ecCC-----ceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC---Ccc
Confidence 8766 679999999999986541 2357788899999999999999985 899
Q ss_pred ecCCCCCCeeeCCCCceEEecccCccccCcccCCcccccccccccccccchh---------------HHHHHHHHHh--C
Q 041479 646 HCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT--G 708 (771)
Q Consensus 646 Hrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t--g 708 (771)
||||||+||+++.++.+||+|||+++....... ........++..||||| |||++|||++ +
T Consensus 161 H~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~ 238 (304)
T cd05096 161 HRDLATRNCLVGENLTIKIADFGMSRNLYAGDY--YRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCK 238 (304)
T ss_pred ccCcchhheEEcCCccEEECCCccceecccCce--eEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccC
Confidence 999999999999999999999999986543221 11112234678899999 6999999987 5
Q ss_pred CCCCCccccCCccHHHHHHhhCC-------CchhhhcCccccccCcccChhchhhcCCHHHHHHHHHH
Q 041479 709 KRPTSDMFTEGLDLHNFVKMALP-------DQILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIA 769 (771)
Q Consensus 709 ~~P~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~ 769 (771)
..||.+.... ...+....... ...+..+...+...+.+||+.||++|||+.+|.+.|++
T Consensus 239 ~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~~ 304 (304)
T cd05096 239 EQPYGELTDE--QVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLTE 304 (304)
T ss_pred CCCCCcCCHH--HHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHhC
Confidence 6677653211 12222211111 11122334455566779999999999999999998874
No 79
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=5.2e-32 Score=271.79 Aligned_cols=234 Identities=22% Similarity=0.259 Sum_probs=178.5
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEee--ccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEE
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLF--LHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYE 603 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~--~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e 603 (771)
...+|.|++|.|.+|.++.+++.||||++. ....-..++..+|+.+++.++|+|||.+++++..+....-...|+|+|
T Consensus 27 ~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYiV~e 106 (359)
T KOG0660|consen 27 IEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYLVFE 106 (359)
T ss_pred cccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEEehh
Confidence 466899999999999999999999999996 444556788999999999999999999999987633222236799999
Q ss_pred eccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCc
Q 041479 604 FMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSN 680 (771)
Q Consensus 604 ~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 680 (771)
+|+ .||.+. .+.++......+..|+++||.|+|+. +|+|||+||+|++++.+..+||+|||+|+..... ..
T Consensus 107 lMe-tDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~--~~ 180 (359)
T KOG0660|consen 107 LME-TDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLNADCDLKICDFGLARYLDKF--FE 180 (359)
T ss_pred HHh-hHHHHHHHcCccccHHHHHHHHHHHHHhcchhhcc---cccccccchhheeeccCCCEEeccccceeecccc--Cc
Confidence 994 577766 33488888899999999999999997 9999999999999999999999999999987654 22
Q ss_pred ccccccccccccccchh----------------HHHHHHHHHhCCCCCCccc--------------cCCccHH-------
Q 041479 681 QCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMF--------------TEGLDLH------- 723 (771)
Q Consensus 681 ~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~--------------~~~~~~~------- 723 (771)
....++.+.|.+|+||| .||++.||++|+.-|.+.- +....+.
T Consensus 181 ~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~a 260 (359)
T KOG0660|consen 181 DGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKA 260 (359)
T ss_pred ccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHH
Confidence 33446678899999999 4999999999998775310 0000111
Q ss_pred -HHHHhhCC---Cc---hhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 724 -NFVKMALP---DQ---ILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 724 -~~~~~~~~---~~---~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
.+.+...+ .. .-...++.-....++|++.||.+|+|++|+++
T Consensus 261 r~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~ 309 (359)
T KOG0660|consen 261 RPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALA 309 (359)
T ss_pred HHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhc
Confidence 11111110 01 11122222223445999999999999999985
No 80
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.97 E-value=3.5e-31 Score=276.98 Aligned_cols=238 Identities=24% Similarity=0.315 Sum_probs=185.7
Q ss_pred ccccccccceEEEEEecCCC---eEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCC-CCceeEEE
Q 041479 527 VSYESLVKATVYKGILDLDQ---TFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDF-QGNYFRAL 600 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~---~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~-~~~~~~~l 600 (771)
-.+|+|.+|+||+|....++ ..||||++.... ....+.+.+|++.++.++||||+++++++.+.+. .+....++
T Consensus 5 ~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~ 84 (273)
T cd05035 5 KILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIPKPMV 84 (273)
T ss_pred cccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCcccEE
Confidence 35799999999999886543 689999997543 3345689999999999999999999999876542 23335799
Q ss_pred EEEeccCCCCCCC---------cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCcc
Q 041479 601 VYEFMHHGSLESC---------PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTR 671 (771)
Q Consensus 601 v~e~~~~g~L~~~---------~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~ 671 (771)
+|||+++|+|..+ ...+++.....++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++
T Consensus 85 v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~ 161 (273)
T cd05035 85 ILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLREDMTVCVADFGLSK 161 (273)
T ss_pred EEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEEECCCCeEEECCcccee
Confidence 9999999998644 23578889999999999999999985 89999999999999999999999999998
Q ss_pred ccCcccCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchh
Q 041479 672 FIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQIL 735 (771)
Q Consensus 672 ~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~ 735 (771)
......... ......++..|+||| +||++||+++ |..||.+... ..+.+..........+
T Consensus 162 ~~~~~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~--~~~~~~~~~~~~~~~~ 237 (273)
T cd05035 162 KIYSGDYYR--QGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVEN--HEIYDYLRHGNRLKQP 237 (273)
T ss_pred ecccccccc--ccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHHcCCCCCCC
Confidence 654332211 111223567899999 6999999999 8899866422 2344444443333444
Q ss_pred hhcCccccccCcccChhchhhcCCHHHHHHHHHHhC
Q 041479 736 QVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAIL 771 (771)
Q Consensus 736 ~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~l 771 (771)
..++..+.....+||+.||++|||+.|+++.|++++
T Consensus 238 ~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~~ 273 (273)
T cd05035 238 EDCLDELYDLMYSCWRADPKDRPTFTKLREVLENIL 273 (273)
T ss_pred cCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhhC
Confidence 455666666777999999999999999999999875
No 81
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.97 E-value=2.9e-31 Score=275.19 Aligned_cols=230 Identities=21% Similarity=0.265 Sum_probs=182.5
Q ss_pred cccccccceEEEEEe--cCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEE
Q 041479 528 SYESLVKATVYKGIL--DLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYE 603 (771)
Q Consensus 528 ~l~~~~~~~Vy~~~~--~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e 603 (771)
.+|+|.+|+||+|++ ..+++.||||+++... ....+++.+|+.++++++||||+++++++... ..++|||
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------~~~lv~e 75 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEAE------SWMLVME 75 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCC------CcEEEEe
Confidence 479999999999976 3456799999986443 34567899999999999999999999987543 3589999
Q ss_pred eccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCc
Q 041479 604 FMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSN 680 (771)
Q Consensus 604 ~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 680 (771)
|+++|+|.++ ...+++..+..++.|++.|++|+|+. +|+||||||+||+++.++.+||+|||+++.........
T Consensus 76 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~ 152 (257)
T cd05116 76 LAELGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYY 152 (257)
T ss_pred cCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEEEcCCCeEEECCCccccccCCCCCee
Confidence 9999999766 34578999999999999999999985 89999999999999999999999999998664432211
Q ss_pred ccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhhhcCccccc
Q 041479 681 QCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFLV 744 (771)
Q Consensus 681 ~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 744 (771)
. ......+++.|+||| |||++||+++ |+.||.+... ..+.+..........+..+++.+..
T Consensus 153 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--~~~~~~i~~~~~~~~~~~~~~~l~~ 229 (257)
T cd05116 153 K-AKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKG--NEVTQMIESGERMECPQRCPPEMYD 229 (257)
T ss_pred e-ecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHHCCCCCCCCCCCCHHHHH
Confidence 1 111223467899999 6999999998 9999976422 2344444443333444556677777
Q ss_pred cCcccChhchhhcCCHHHHHHHHHH
Q 041479 745 GGVQEGEETAEENIKKGQIRESLIA 769 (771)
Q Consensus 745 ~~~~cl~~~p~~Rpt~~~vl~~L~~ 769 (771)
...+||+.||++||++.+|++.|++
T Consensus 230 li~~~~~~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 230 LMKLCWTYGVDERPGFAVVELRLRN 254 (257)
T ss_pred HHHHHhccCchhCcCHHHHHHHHhc
Confidence 7889999999999999999999986
No 82
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=99.97 E-value=1.2e-31 Score=289.06 Aligned_cols=225 Identities=20% Similarity=0.201 Sum_probs=178.1
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEE
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
...+|+|.+|.||+|++..+++.||||++.... ....+.+.+|++++..++||||+++++++.+.+ ..|+||
T Consensus 6 ~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~-----~~~lv~ 80 (333)
T cd05600 6 LTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDE-----YLYLAM 80 (333)
T ss_pred EEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCC-----EEEEEE
Confidence 446899999999999999888899999997542 234567889999999999999999999988776 789999
Q ss_pred EeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCC
Q 041479 603 EFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSS 679 (771)
Q Consensus 603 e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 679 (771)
||+++|+|.++ ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 81 e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~---- 153 (333)
T cd05600 81 EYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT---- 153 (333)
T ss_pred eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEEEeCcCCccccc----
Confidence 99999999876 34678889999999999999999986 899999999999999999999999999985433
Q ss_pred cccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhh--CC-Cch---hhhc
Q 041479 680 NQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMA--LP-DQI---LQVL 738 (771)
Q Consensus 680 ~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~--~~-~~~---~~~~ 738 (771)
......||+.|+||| +||++|||++|+.||.+..... ......... .. +.. ...+
T Consensus 154 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~ 229 (333)
T cd05600 154 ---YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNE-TWENLKYWKETLQRPVYDDPRFNL 229 (333)
T ss_pred ---ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHH-HHHHHHhccccccCCCCCcccccc
Confidence 122356999999999 6999999999999997532111 111111111 11 110 1123
Q ss_pred CccccccCcccChhchhhcCCHHHHHHH
Q 041479 739 DPLFLVGGVQEGEETAEENIKKGQIRES 766 (771)
Q Consensus 739 ~~~~~~~~~~cl~~~p~~Rpt~~~vl~~ 766 (771)
++.+.....+|+..+|++||++.++++.
T Consensus 230 s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 230 SDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred CHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 4445556669999999999999999853
No 83
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.97 E-value=3.2e-31 Score=277.27 Aligned_cols=238 Identities=22% Similarity=0.301 Sum_probs=180.7
Q ss_pred ccccccccceEEEEEecCCCe--EEEEEEeecc--chhhHHHHHHHHHHHhccCCCCceeEEEEeecCCC-CCceeEEEE
Q 041479 527 VSYESLVKATVYKGILDLDQT--FIAVKVLFLH--QRGALKSFMAECQALRNIRHRNLVKIITACSTSDF-QGNYFRALV 601 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~--~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~-~~~~~~~lv 601 (771)
..+|+|.+|.||+|++..++. .||||.++.. .....+.+.+|++++++++||||+++++++..... ......+++
T Consensus 5 ~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v 84 (272)
T cd05075 5 KTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPVVI 84 (272)
T ss_pred cccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCcEEE
Confidence 347999999999999877664 6999988654 24456789999999999999999999998854321 111256899
Q ss_pred EEeccCCCCCCC---------cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccc
Q 041479 602 YEFMHHGSLESC---------PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRF 672 (771)
Q Consensus 602 ~e~~~~g~L~~~---------~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~ 672 (771)
|||+++|+|.++ ...+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 85 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 161 (272)
T cd05075 85 LPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCMLNENMNVCVADFGLSKK 161 (272)
T ss_pred EEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheEEcCCCCEEECCCCcccc
Confidence 999999998654 23478889999999999999999985 899999999999999999999999999986
Q ss_pred cCcccCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhh
Q 041479 673 IPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQ 736 (771)
Q Consensus 673 ~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 736 (771)
....... .......+++.|+||| |||++||+++ |+.||..... ..+.+............
T Consensus 162 ~~~~~~~--~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--~~~~~~~~~~~~~~~~~ 237 (272)
T cd05075 162 IYNGDYY--RQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVEN--SEIYDYLRQGNRLKQPP 237 (272)
T ss_pred cCcccce--ecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHHHcCCCCCCCC
Confidence 6432211 1111223567899999 6999999999 8889865321 12333332222222223
Q ss_pred hcCccccccCcccChhchhhcCCHHHHHHHHHHhC
Q 041479 737 VLDPLFLVGGVQEGEETAEENIKKGQIRESLIAIL 771 (771)
Q Consensus 737 ~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~l 771 (771)
.++..+.....+||+.||++|||+.++++.|++++
T Consensus 238 ~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 272 (272)
T cd05075 238 DCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKAL 272 (272)
T ss_pred CCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhhC
Confidence 34445556677999999999999999999999875
No 84
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.97 E-value=2.9e-31 Score=275.09 Aligned_cols=227 Identities=23% Similarity=0.303 Sum_probs=177.4
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEec
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFM 605 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~~ 605 (771)
...+|+|.+|.||+++++.+. .||+|.+... ....++|.+|++++++++||||+++++++.+.+ ..++||||+
T Consensus 9 ~~~lg~G~~~~vy~~~~~~~~-~~a~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~iv~e~~ 81 (256)
T cd05114 9 MKELGSGQFGVVHLGKWRAQI-KVAIKAINEG-AMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQK-----PLYIVTEFM 81 (256)
T ss_pred eeEecCCcCceEEEEEeccCc-eEEEEecccC-CccHHHHHHHHHHHHHCCCCCceeEEEEEccCC-----CEEEEEEcC
Confidence 345899999999999987654 8999988533 233568999999999999999999999987766 679999999
Q ss_pred cCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCcc
Q 041479 606 HHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQ 681 (771)
Q Consensus 606 ~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 681 (771)
++|+|.++ ...+++..+..++.|++.||+|||+. +|+||||||+||++++++.+|++|||.++.......
T Consensus 82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~--- 155 (256)
T cd05114 82 ENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEY--- 155 (256)
T ss_pred CCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEEEcCCCeEEECCCCCccccCCCce---
Confidence 99999765 23478899999999999999999985 899999999999999999999999999986533221
Q ss_pred cccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhhhcCcccccc
Q 041479 682 CSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFLVG 745 (771)
Q Consensus 682 ~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 745 (771)
.......++..|+||| ||+++||+++ |+.||.... .....+......+...+......+...
T Consensus 156 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~l 233 (256)
T cd05114 156 TSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKS--NYEVVEMISRGFRLYRPKLASMTVYEV 233 (256)
T ss_pred eccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCC--HHHHHHHHHCCCCCCCCCCCCHHHHHH
Confidence 1112234567899999 6999999999 899986532 122233333222222233344455566
Q ss_pred CcccChhchhhcCCHHHHHHHH
Q 041479 746 GVQEGEETAEENIKKGQIRESL 767 (771)
Q Consensus 746 ~~~cl~~~p~~Rpt~~~vl~~L 767 (771)
..+||+.+|++|||+.++++.|
T Consensus 234 i~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 234 MYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred HHHHccCCcccCcCHHHHHHhh
Confidence 7799999999999999999887
No 85
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.97 E-value=3e-31 Score=276.71 Aligned_cols=233 Identities=20% Similarity=0.266 Sum_probs=184.4
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeecc---chhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEE
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLH---QRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
...+|+|.+|.||+|+...+++.||||.+... ......++.+|+++++.++||||+++++++.+.+ ..++||
T Consensus 7 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~~v~ 81 (267)
T cd08228 7 EKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDN-----ELNIVL 81 (267)
T ss_pred eeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECC-----eEEEEE
Confidence 44579999999999999988889999988542 2344567899999999999999999999988766 679999
Q ss_pred EeccCCCCCCC-------cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCc
Q 041479 603 EFMHHGSLESC-------PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPE 675 (771)
Q Consensus 603 e~~~~g~L~~~-------~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~ 675 (771)
||+++|+|.++ ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.++++|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence 99999999754 23477888999999999999999985 999999999999999999999999999886543
Q ss_pred ccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHh-hCCCchhhhcC
Q 041479 676 VMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKM-ALPDQILQVLD 739 (771)
Q Consensus 676 ~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 739 (771)
... ......|++.|+||| +|+++||+++|+.||.........+.+.... ..+.......+
T Consensus 159 ~~~----~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (267)
T cd08228 159 KTT----AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPPLPTEHYS 234 (267)
T ss_pred hhH----HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCCCCCCChhhcC
Confidence 221 112345888999999 6999999999999985432211122222222 22333333445
Q ss_pred ccccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 740 PLFLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 740 ~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
..+...+.+||..+|++||++.+|++.++++
T Consensus 235 ~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~ 265 (267)
T cd08228 235 EKLRELVSMCIYPDPDQRPDIGYVHQIAKQM 265 (267)
T ss_pred HHHHHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence 5566677799999999999999999999875
No 86
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=99.97 E-value=3.8e-32 Score=286.29 Aligned_cols=232 Identities=20% Similarity=0.287 Sum_probs=189.0
Q ss_pred cccccccccceEEEEEecCC----CeEEEEEEeecc-chhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEE
Q 041479 526 NVSYESLVKATVYKGILDLD----QTFIAVKVLFLH-QRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRAL 600 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~----~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~l 600 (771)
.--+|+|.||.||+|++.+- .--||||.-+.. ..+..+.|+.|+.+|+.++|||||+++|+|.+.. .||
T Consensus 394 ~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~P------~Wi 467 (974)
T KOG4257|consen 394 KRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQP------MWI 467 (974)
T ss_pred HHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeeccc------eeE
Confidence 34579999999999987543 346888887653 3456889999999999999999999999998864 699
Q ss_pred EEEeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcc
Q 041479 601 VYEFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676 (771)
Q Consensus 601 v~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~ 676 (771)
|||.++-|.|..+ ...++......++.|++.||+|||+. ++|||||.++|||+.+..-+|++|||++|.+.+.
T Consensus 468 vmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~ 544 (974)
T KOG4257|consen 468 VMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESK---RFVHRDIAARNILVSSPQCVKLADFGLSRYLEDD 544 (974)
T ss_pred EEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhheeecCcceeeecccchhhhcccc
Confidence 9999999999877 44688888899999999999999985 9999999999999999888999999999988765
Q ss_pred cCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhhhcCc
Q 041479 677 MSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQVLDP 740 (771)
Q Consensus 677 ~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 740 (771)
..+ ......-...||||| |||++||+++ |.+||.+....+.. .....+-+.+.++.+.|
T Consensus 545 ~yY---kaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI--~~iEnGeRlP~P~nCPp 619 (974)
T KOG4257|consen 545 AYY---KASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVI--GHIENGERLPCPPNCPP 619 (974)
T ss_pred chh---hccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccceE--EEecCCCCCCCCCCCCh
Confidence 432 122223467899999 8999999998 99999876444331 11223333445667777
Q ss_pred cccccCcccChhchhhcCCHHHHHHHHHHhC
Q 041479 741 LFLVGGVQEGEETAEENIKKGQIRESLIAIL 771 (771)
Q Consensus 741 ~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~l 771 (771)
.+...+.+||+.+|.+||+..++...|.+++
T Consensus 620 ~LYslmskcWayeP~kRPrftei~~~lsdv~ 650 (974)
T KOG4257|consen 620 ALYSLMSKCWAYEPSKRPRFTEIKAILSDVL 650 (974)
T ss_pred HHHHHHHHHhccCcccCCcHHHHHHHHHHHH
Confidence 7777888999999999999999999998874
No 87
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.97 E-value=3e-31 Score=290.89 Aligned_cols=239 Identities=24% Similarity=0.273 Sum_probs=184.2
Q ss_pred cccccccccccccceEEEEEecC-----CCeEEEEEEeeccc-hhhHHHHHHHHHHHhccC-CCCceeEEEEeecCCCCC
Q 041479 522 DLLLNVSYESLVKATVYKGILDL-----DQTFIAVKVLFLHQ-RGALKSFMAECQALRNIR-HRNLVKIITACSTSDFQG 594 (771)
Q Consensus 522 ~~~~~~~l~~~~~~~Vy~~~~~~-----~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~ 594 (771)
.....-.+|+|++|.||+|++.. .++.||||++.... ....+.+.+|++++.++. |||||+++++|.+.+
T Consensus 38 ~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~--- 114 (401)
T cd05107 38 NLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGG--- 114 (401)
T ss_pred HeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCC---
Confidence 34445679999999999999643 34689999996543 333467999999999997 999999999998765
Q ss_pred ceeEEEEEEeccCCCCCCCc------------------------------------------------------------
Q 041479 595 NYFRALVYEFMHHGSLESCP------------------------------------------------------------ 614 (771)
Q Consensus 595 ~~~~~lv~e~~~~g~L~~~~------------------------------------------------------------ 614 (771)
..++||||+++|+|.++.
T Consensus 115 --~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (401)
T cd05107 115 --PIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPM 192 (401)
T ss_pred --CcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccch
Confidence 679999999999985431
Q ss_pred -----------------------------------------ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCC
Q 041479 615 -----------------------------------------RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSN 653 (771)
Q Consensus 615 -----------------------------------------~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~N 653 (771)
..+++.....++.|++.||+|||+. +|+||||||+|
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrdlkp~N 269 (401)
T cd05107 193 QDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK---NCVHRDLAARN 269 (401)
T ss_pred hcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CcCcccCCcce
Confidence 1356677889999999999999985 89999999999
Q ss_pred eeeCCCCceEEecccCccccCcccCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCcccc
Q 041479 654 VLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFT 717 (771)
Q Consensus 654 ILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~ 717 (771)
|++++++.+|++|||+++........ .......+++.||||| |||++||+++ |..||.....
T Consensus 270 iLl~~~~~~kL~DfGla~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~ 347 (401)
T cd05107 270 VLICEGKLVKICDFGLARDIMRDSNY--ISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPM 347 (401)
T ss_pred EEEeCCCEEEEEecCcceeccccccc--ccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCc
Confidence 99999999999999999865332211 1112335788899999 7999999998 8899865422
Q ss_pred CCccHHHHHHhhCCCchhhhcCccccccCcccChhchhhcCCHHHHHHHHHHhC
Q 041479 718 EGLDLHNFVKMALPDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAIL 771 (771)
Q Consensus 718 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~l 771 (771)
.. ...+......+...+..++..+...+.+||..+|++||+++|+++.|++++
T Consensus 348 ~~-~~~~~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 348 NE-QFYNAIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred hH-HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 22 233333333333334445566666777999999999999999999999875
No 88
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.97 E-value=3.1e-31 Score=285.24 Aligned_cols=225 Identities=21% Similarity=0.202 Sum_probs=175.3
Q ss_pred cccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhcc-CCCCceeEEEEeecCCCCCceeEEEEEE
Q 041479 528 SYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNI-RHRNLVKIITACSTSDFQGNYFRALVYE 603 (771)
Q Consensus 528 ~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~~~~lv~e 603 (771)
.+|+|.+|+||+|+++.+++.||||+++... ....+.+.+|+.++.++ +||||+++++++.+.+ ..|+|||
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~-----~~~lv~e 76 (329)
T cd05588 2 VIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTES-----RLFFVIE 76 (329)
T ss_pred eEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCC-----EEEEEEe
Confidence 3689999999999999999999999997542 23456688999999998 6999999999988776 7899999
Q ss_pred eccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCc
Q 041479 604 FMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSN 680 (771)
Q Consensus 604 ~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 680 (771)
|+++|+|..+ .+.+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 77 ~~~~g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~--- 150 (329)
T cd05588 77 FVSGGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPG--- 150 (329)
T ss_pred CCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEECcCccccccccCC---
Confidence 9999999655 35689999999999999999999985 99999999999999999999999999987422111
Q ss_pred ccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccC---CccHHHHHHh---hCCCchhhhcC
Q 041479 681 QCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTE---GLDLHNFVKM---ALPDQILQVLD 739 (771)
Q Consensus 681 ~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~---~~~~~~~~~~---~~~~~~~~~~~ 739 (771)
......+||+.|+||| +||++||+++|+.||+..... .....++... ..+...+..++
T Consensus 151 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 229 (329)
T cd05588 151 -DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIPRSLS 229 (329)
T ss_pred -CccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCCCCCCCC
Confidence 1122357999999999 699999999999999632111 1111111111 11123344455
Q ss_pred ccccccCcccChhchhhcCC------HHHHH
Q 041479 740 PLFLVGGVQEGEETAEENIK------KGQIR 764 (771)
Q Consensus 740 ~~~~~~~~~cl~~~p~~Rpt------~~~vl 764 (771)
+.+.....+|++.||++||| +.+++
T Consensus 230 ~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~ 260 (329)
T cd05588 230 VKASSVLKGFLNKDPKERLGCHPQTGFRDIK 260 (329)
T ss_pred HHHHHHHHHHhccCHHHcCCCCCCCCHHHHh
Confidence 55666677999999999997 56665
No 89
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=99.97 E-value=3.8e-31 Score=279.26 Aligned_cols=234 Identities=24% Similarity=0.312 Sum_probs=183.4
Q ss_pred ccccccccccceEEEEEec-----CCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEE
Q 041479 525 LNVSYESLVKATVYKGILD-----LDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRA 599 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~-----~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 599 (771)
....+|+|.+|+||++... .++..||+|.+........+.+.+|++++++++||||+++++++...+ ..+
T Consensus 9 ~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~ 83 (288)
T cd05093 9 LKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGD-----PLI 83 (288)
T ss_pred eccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCC-----ccE
Confidence 3456899999999999853 345579999997665556778999999999999999999999988766 679
Q ss_pred EEEEeccCCCCCCCc----------------ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceE
Q 041479 600 LVYEFMHHGSLESCP----------------RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAH 663 (771)
Q Consensus 600 lv~e~~~~g~L~~~~----------------~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~k 663 (771)
+||||+++|+|.++. ..+++.++..++.|++.||+|||+. +++||||||+||++++++.+|
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i~H~dlkp~Nili~~~~~~k 160 (288)
T cd05093 84 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVK 160 (288)
T ss_pred EEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCCcEE
Confidence 999999999986541 2388999999999999999999985 899999999999999999999
Q ss_pred EecccCccccCcccCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHH
Q 041479 664 MGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVK 727 (771)
Q Consensus 664 l~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~ 727 (771)
++|||+++....... ........+++.|+||| |||++|||++ |+.||...... ...+...
T Consensus 161 l~dfg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~--~~~~~i~ 236 (288)
T cd05093 161 IGDFGMSRDVYSTDY--YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN--EVIECIT 236 (288)
T ss_pred eccCCccccccCCce--eecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHH
Confidence 999999986533221 11112234578899999 6999999999 99998654221 1222222
Q ss_pred hhCCCchhhhcCccccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 728 MALPDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 728 ~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
..........+++.+.....+||+.||++|||+.++.+.|+++
T Consensus 237 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~ 279 (288)
T cd05093 237 QGRVLQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNL 279 (288)
T ss_pred cCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHH
Confidence 2222223344556666777799999999999999999999876
No 90
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.97 E-value=4.4e-31 Score=275.32 Aligned_cols=235 Identities=21% Similarity=0.311 Sum_probs=184.8
Q ss_pred ccccccccccceEEEEEecCC---CeEEEEEEeeccc-hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEE
Q 041479 525 LNVSYESLVKATVYKGILDLD---QTFIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRAL 600 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~~---~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~l 600 (771)
....+|+|.+|+||+|+++.. ...||||.++... ....++|.+|+.++++++||||+++++++.+.+ ..++
T Consensus 8 ~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~i 82 (266)
T cd05033 8 IEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSR-----PVMI 82 (266)
T ss_pred eeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCC-----ceEE
Confidence 345679999999999998654 4589999986543 344578999999999999999999999987765 6799
Q ss_pred EEEeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcc
Q 041479 601 VYEFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676 (771)
Q Consensus 601 v~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~ 676 (771)
||||+++|+|.++ ...+++.++..++.|++.|++|||+. +|+||||||+||++++++.+|++|||+++.....
T Consensus 83 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~ 159 (266)
T cd05033 83 ITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDS 159 (266)
T ss_pred EEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCCEEECccchhhccccc
Confidence 9999999999776 23588999999999999999999985 8999999999999999999999999999876521
Q ss_pred cCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhhhcCc
Q 041479 677 MSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQVLDP 740 (771)
Q Consensus 677 ~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 740 (771)
.. ........+++.|+||| +|+++||+++ |..||.+.. ...+.+..............+.
T Consensus 160 ~~--~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 235 (266)
T cd05033 160 EA--TYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMS--NQDVIKAVEDGYRLPPPMDCPS 235 (266)
T ss_pred cc--ceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCC--HHHHHHHHHcCCCCCCCCCCCH
Confidence 11 11112234567899999 6999999998 999986532 1223333333222222334455
Q ss_pred cccccCcccChhchhhcCCHHHHHHHHHHhC
Q 041479 741 LFLVGGVQEGEETAEENIKKGQIRESLIAIL 771 (771)
Q Consensus 741 ~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~l 771 (771)
.+.....+||+.+|++||++.++++.|++++
T Consensus 236 ~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~~ 266 (266)
T cd05033 236 ALYQLMLDCWQKDRNERPTFSQIVSTLDKMI 266 (266)
T ss_pred HHHHHHHHHcCCCcccCcCHHHHHHHHHhhC
Confidence 5666777999999999999999999999875
No 91
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.97 E-value=3.4e-31 Score=278.36 Aligned_cols=224 Identities=24% Similarity=0.256 Sum_probs=175.1
Q ss_pred ccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEec
Q 041479 529 YESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFM 605 (771)
Q Consensus 529 l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~~ 605 (771)
+|+|.+|+||++.++.+++.||||.+.... ....+.+..|++++++++||||+++.+++.+.+ ..|+||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~-----~~~lv~e~~ 75 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKT-----DLCLVMTIM 75 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCC-----eEEEEEeCC
Confidence 588999999999999888899999996542 223467788999999999999999999887765 689999999
Q ss_pred cCCCCCCC-------cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccC
Q 041479 606 HHGSLESC-------PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMS 678 (771)
Q Consensus 606 ~~g~L~~~-------~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 678 (771)
++|+|... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 76 ~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~ 152 (280)
T cd05608 76 NGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQS 152 (280)
T ss_pred CCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCccceecCCCCc
Confidence 99999643 23588999999999999999999985 999999999999999999999999999976543221
Q ss_pred Ccccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhC--CCchhhhcCcc
Q 041479 679 SNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMAL--PDQILQVLDPL 741 (771)
Q Consensus 679 ~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 741 (771)
......||+.|+||| +||++|||++|+.||...... ....+...... +...+..+++.
T Consensus 153 ----~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 227 (280)
T cd05608 153 ----KTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEK-VENKELKQRILNDSVTYPDKFSPA 227 (280)
T ss_pred ----cccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcc-hhHHHHHHhhcccCCCCcccCCHH
Confidence 122356899999999 699999999999999643111 11112221111 12223334555
Q ss_pred ccccCcccChhchhhcC-----CHHHHHH
Q 041479 742 FLVGGVQEGEETAEENI-----KKGQIRE 765 (771)
Q Consensus 742 ~~~~~~~cl~~~p~~Rp-----t~~~vl~ 765 (771)
+.....+|++.||++|| +++++++
T Consensus 228 ~~~li~~~l~~~P~~R~~~~~~~~~~~l~ 256 (280)
T cd05608 228 SKSFCEALLAKDPEKRLGFRDGNCDGLRT 256 (280)
T ss_pred HHHHHHHHhcCCHHHhcCCCCCCHHHHhc
Confidence 55666799999999999 6777764
No 92
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.97 E-value=2.3e-31 Score=285.04 Aligned_cols=218 Identities=24% Similarity=0.217 Sum_probs=172.4
Q ss_pred cccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhcc-CCCCceeEEEEeecCCCCCceeEEEEEE
Q 041479 528 SYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNI-RHRNLVKIITACSTSDFQGNYFRALVYE 603 (771)
Q Consensus 528 ~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~~~~lv~e 603 (771)
.+|+|.+|+||+|+++.+++.||||++.... ....+.+..|..++... +||||+++++++.+.+ ..|+|||
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~-----~~~iv~E 76 (320)
T cd05590 2 VLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPD-----RLFFVME 76 (320)
T ss_pred eeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCC-----EEEEEEc
Confidence 3789999999999999988899999996542 33456788899998877 6999999999987776 7899999
Q ss_pred eccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCc
Q 041479 604 FMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSN 680 (771)
Q Consensus 604 ~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 680 (771)
|+++|+|... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 77 y~~~g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~--- 150 (320)
T cd05590 77 FVNGGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNG--- 150 (320)
T ss_pred CCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCC---
Confidence 9999999755 34688999999999999999999985 99999999999999999999999999987532211
Q ss_pred ccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCcccccc
Q 041479 681 QCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFLVG 745 (771)
Q Consensus 681 ~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 745 (771)
.......||+.|+||| +||++|||++|+.||.+.... .+.+..... ....+..+++.+...
T Consensus 151 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~--~~~~~i~~~-~~~~~~~~~~~~~~l 226 (320)
T cd05590 151 -KTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENED--DLFEAILND-EVVYPTWLSQDAVDI 226 (320)
T ss_pred -CcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH--HHHHHHhcC-CCCCCCCCCHHHHHH
Confidence 1123356999999999 699999999999999753211 122222111 112233345555566
Q ss_pred CcccChhchhhcCCH
Q 041479 746 GVQEGEETAEENIKK 760 (771)
Q Consensus 746 ~~~cl~~~p~~Rpt~ 760 (771)
..+|++.||++||++
T Consensus 227 i~~~L~~dP~~R~~~ 241 (320)
T cd05590 227 LKAFMTKNPTMRLGS 241 (320)
T ss_pred HHHHcccCHHHCCCC
Confidence 679999999999998
No 93
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.97 E-value=3e-31 Score=285.22 Aligned_cols=221 Identities=21% Similarity=0.212 Sum_probs=172.2
Q ss_pred cccccccceEEEEEecCCCeEEEEEEeecc---chhhHHHHHHHHHHHhcc-CCCCceeEEEEeecCCCCCceeEEEEEE
Q 041479 528 SYESLVKATVYKGILDLDQTFIAVKVLFLH---QRGALKSFMAECQALRNI-RHRNLVKIITACSTSDFQGNYFRALVYE 603 (771)
Q Consensus 528 ~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~~~~lv~e 603 (771)
.+|+|.+|+||+|+.+.+++.||+|++... .....+.+.+|+.++.++ +|||||++++++.+.+ ..|+|||
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~-----~~~lv~E 76 (329)
T cd05618 2 VIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTES-----RLFFVIE 76 (329)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCC-----EEEEEEe
Confidence 379999999999999999999999999754 233456678899988877 7999999999988776 7899999
Q ss_pred eccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCc
Q 041479 604 FMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSN 680 (771)
Q Consensus 604 ~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 680 (771)
|+++|+|..+ ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 77 ~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~--- 150 (329)
T cd05618 77 YVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG--- 150 (329)
T ss_pred CCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCCEEEeeCCccccccCCC---
Confidence 9999999655 34688999999999999999999985 99999999999999999999999999987532211
Q ss_pred ccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCC---ccHHHHHHh---hCCCchhhhcC
Q 041479 681 QCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEG---LDLHNFVKM---ALPDQILQVLD 739 (771)
Q Consensus 681 ~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~---~~~~~~~~~---~~~~~~~~~~~ 739 (771)
.......||+.|+||| +||++|||++|+.||....... .....+... .....++..++
T Consensus 151 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~~ 229 (329)
T cd05618 151 -DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLS 229 (329)
T ss_pred -CccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCCCCCCCC
Confidence 1122356899999999 6999999999999995321111 111111111 11123344455
Q ss_pred ccccccCcccChhchhhcCCH
Q 041479 740 PLFLVGGVQEGEETAEENIKK 760 (771)
Q Consensus 740 ~~~~~~~~~cl~~~p~~Rpt~ 760 (771)
..+.....+|++.||++||++
T Consensus 230 ~~~~~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 230 VKAASVLKSFLNKDPKERLGC 250 (329)
T ss_pred HHHHHHHHHHhcCCHHHcCCC
Confidence 555566779999999999984
No 94
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=99.97 E-value=2.2e-31 Score=270.31 Aligned_cols=232 Identities=26% Similarity=0.254 Sum_probs=187.4
Q ss_pred cccccccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEE
Q 041479 524 LLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRAL 600 (771)
Q Consensus 524 ~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~l 600 (771)
....-+|.|-.|+||.++.+.++..+|+|++.... .+...+...|.+||+.+.||.+.+||+.+.++. +.|+
T Consensus 80 ~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~-----~~cl 154 (459)
T KOG0610|consen 80 RLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDK-----YSCL 154 (459)
T ss_pred HHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccc-----eeEE
Confidence 33445899999999999999998999999997653 345567888999999999999999999988877 7899
Q ss_pred EEEeccCCCCCCC-----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCc
Q 041479 601 VYEFMHHGSLESC-----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPE 675 (771)
Q Consensus 601 v~e~~~~g~L~~~-----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~ 675 (771)
|||||+||+|... .+.+++..+..++.+|.-||+|||-. |||+|||||+||||.++|++.++||.++.....
T Consensus 155 ~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvredGHIMLsDFDLS~~~~~ 231 (459)
T KOG0610|consen 155 VMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHML---GIVYRDLKPENILVREDGHIMLSDFDLSLRCPV 231 (459)
T ss_pred EEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEecCCcEEeeeccccccCCC
Confidence 9999999999654 56789999999999999999999986 999999999999999999999999999754311
Q ss_pred c--------------------------------c-C-------------------Ccccccccccccccccchh------
Q 041479 676 V--------------------------------M-S-------------------SNQCSSVGLKGTVGYATPE------ 697 (771)
Q Consensus 676 ~--------------------------------~-~-------------------~~~~~~~~~~gt~~y~aPE------ 697 (771)
. . . ........++||--|.|||
T Consensus 232 ~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~G 311 (459)
T KOG0610|consen 232 SPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEG 311 (459)
T ss_pred CCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCC
Confidence 0 0 0 0001224578999999999
Q ss_pred ---------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCccccccCcccChhchhhcCC----HHHHH
Q 041479 698 ---------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFLVGGVQEGEETAEENIK----KGQIR 764 (771)
Q Consensus 698 ---------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt----~~~vl 764 (771)
|||++|||+.|..||.+.. ....+..++...+.......+....++++.+.|++||++|.- +.||-
T Consensus 312 HgsAVDWWtfGIflYEmLyG~TPFKG~~-~~~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK 390 (459)
T KOG0610|consen 312 HGSAVDWWTFGIFLYEMLYGTTPFKGSN-NKETLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIK 390 (459)
T ss_pred CCchhhHHHHHHHHHHHHhCCCCcCCCC-chhhHHHHhcCCCcCCCCCcchhHHHHHHHHHhccChhhhhccccchHHhh
Confidence 8999999999999998753 345688888776654333344455555666889999999986 55553
No 95
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=99.97 E-value=3.2e-31 Score=283.38 Aligned_cols=222 Identities=22% Similarity=0.245 Sum_probs=172.7
Q ss_pred cccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhcc-CCCCceeEEEEeecCCCCCceeEEEEEE
Q 041479 528 SYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNI-RHRNLVKIITACSTSDFQGNYFRALVYE 603 (771)
Q Consensus 528 ~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~~~~lv~e 603 (771)
.+|+|.+|+||+|++..+++.||||++.... ....+.+..|..++... +||||+++++++...+ ..|+|||
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~-----~~~lv~e 76 (316)
T cd05592 2 VLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKE-----HLFFVME 76 (316)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCC-----EEEEEEc
Confidence 3799999999999999988899999997542 23445667777777754 7999999999987766 7899999
Q ss_pred eccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCc
Q 041479 604 FMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSN 680 (771)
Q Consensus 604 ~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 680 (771)
|+++|+|..+ ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 77 ~~~gg~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~--- 150 (316)
T cd05592 77 YLNGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE--- 150 (316)
T ss_pred CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC---
Confidence 9999999765 34688889999999999999999985 99999999999999999999999999997543221
Q ss_pred ccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCcccccc
Q 041479 681 QCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFLVG 745 (771)
Q Consensus 681 ~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 745 (771)
......+||+.|+||| +||++|||++|+.||.+... ..+....... ....+..++..+...
T Consensus 151 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~--~~~~~~i~~~-~~~~~~~~~~~~~~l 226 (316)
T cd05592 151 -GKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDE--DELFDSILND-RPHFPRWISKEAKDC 226 (316)
T ss_pred -CccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCH--HHHHHHHHcC-CCCCCCCCCHHHHHH
Confidence 1122456999999999 69999999999999975321 1121111111 222334455555566
Q ss_pred CcccChhchhhcCCHH-HHH
Q 041479 746 GVQEGEETAEENIKKG-QIR 764 (771)
Q Consensus 746 ~~~cl~~~p~~Rpt~~-~vl 764 (771)
..+||+.||++||++. +++
T Consensus 227 l~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05592 227 LSKLFERDPTKRLGVDGDIR 246 (316)
T ss_pred HHHHccCCHHHcCCChHHHH
Confidence 6799999999999976 443
No 96
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.97 E-value=2.5e-31 Score=286.60 Aligned_cols=237 Identities=22% Similarity=0.281 Sum_probs=182.2
Q ss_pred ccccccccccceEEEEEecC-----CCeEEEEEEeeccc-hhhHHHHHHHHHHHhcc-CCCCceeEEEEeecCCCCCcee
Q 041479 525 LNVSYESLVKATVYKGILDL-----DQTFIAVKVLFLHQ-RGALKSFMAECQALRNI-RHRNLVKIITACSTSDFQGNYF 597 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~-----~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~~ 597 (771)
..-.+|+|.+|.||+|+... +++.||+|+++... ....+.+.+|++++.++ +||||++++++|...+. .
T Consensus 11 i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~----~ 86 (337)
T cd05054 11 LGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGG----P 86 (337)
T ss_pred hhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCC----C
Confidence 34568999999999997543 34689999986443 23346788999999999 79999999998865442 5
Q ss_pred EEEEEEeccCCCCCCCc---------------------------------------------------------------
Q 041479 598 RALVYEFMHHGSLESCP--------------------------------------------------------------- 614 (771)
Q Consensus 598 ~~lv~e~~~~g~L~~~~--------------------------------------------------------------- 614 (771)
.+++|||+++|+|.++.
T Consensus 87 ~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (337)
T cd05054 87 LMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELY 166 (337)
T ss_pred EEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHh
Confidence 78999999999985431
Q ss_pred -ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCcccccccccccccc
Q 041479 615 -RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGY 693 (771)
Q Consensus 615 -~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y 693 (771)
..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.+...... .......++..|
T Consensus 167 ~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~--~~~~~~~~~~~y 241 (337)
T cd05054 167 KEPLTLEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDY--VRKGDARLPLKW 241 (337)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeCCCcEEEeccccchhcccCcch--hhccCCCCCccc
Confidence 2578889999999999999999985 9999999999999999999999999999865432211 112223467789
Q ss_pred cchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhhhcCccccccCcccChhchhhc
Q 041479 694 ATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFLVGGVQEGEETAEEN 757 (771)
Q Consensus 694 ~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~R 757 (771)
|||| |||++||+++ |..||.+..... .+............+....+.+...+.+||+.+|++|
T Consensus 242 ~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~p~~R 320 (337)
T cd05054 242 MAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE-EFCRRLKEGTRMRAPEYATPEIYSIMLDCWHNNPEDR 320 (337)
T ss_pred cCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccH-HHHHHHhccCCCCCCccCCHHHHHHHHHHccCChhhC
Confidence 9999 6999999998 999997642222 2333333333333334445556666779999999999
Q ss_pred CCHHHHHHHHHHhC
Q 041479 758 IKKGQIRESLIAIL 771 (771)
Q Consensus 758 pt~~~vl~~L~~~l 771 (771)
|++.|+++.|++++
T Consensus 321 Ps~~ell~~l~~~~ 334 (337)
T cd05054 321 PTFSELVEILGDLL 334 (337)
T ss_pred cCHHHHHHHHHHHH
Confidence 99999999999874
No 97
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.97 E-value=3.5e-31 Score=285.25 Aligned_cols=177 Identities=24% Similarity=0.329 Sum_probs=152.1
Q ss_pred ccccccccccceEEEEEecCCCeEEEEEEeeccc-hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEE
Q 041479 525 LNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYE 603 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e 603 (771)
....+|+|.+|+||+++++.+++.||+|.+.... ....+++.+|++++++++|||||++++++.+.+ ..++|||
T Consensus 9 ~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~~lv~e 83 (333)
T cd06650 9 KISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG-----EISICME 83 (333)
T ss_pred eeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECC-----EEEEEEe
Confidence 3456899999999999999989899999987543 344578999999999999999999999998876 7899999
Q ss_pred eccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCc
Q 041479 604 FMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSN 680 (771)
Q Consensus 604 ~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 680 (771)
|+++|+|.++ ...+++.....++.|++.|++|||+. .+|+||||||+||+++.++.+||+|||++.......
T Consensus 84 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~--~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~--- 158 (333)
T cd06650 84 HMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM--- 158 (333)
T ss_pred cCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhc--CCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhc---
Confidence 9999999876 34578888899999999999999974 379999999999999999999999999987553321
Q ss_pred ccccccccccccccchh---------------HHHHHHHHHhCCCCCCc
Q 041479 681 QCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSD 714 (771)
Q Consensus 681 ~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~ 714 (771)
.....||+.|+||| +||++||+++|+.||..
T Consensus 159 ---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~ 204 (333)
T cd06650 159 ---ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPP 204 (333)
T ss_pred ---cccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 12346899999999 69999999999999864
No 98
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=99.97 E-value=3e-31 Score=286.87 Aligned_cols=235 Identities=20% Similarity=0.187 Sum_probs=174.8
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeecc--chhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEE
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLH--QRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYE 603 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e 603 (771)
...+|+|.+|.||+|+...+++.||||++... ......++.+|++++++++||||+++++++...+.......|+|||
T Consensus 5 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~lv~e 84 (338)
T cd07859 5 QEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYVVFE 84 (338)
T ss_pred EEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEEEEe
Confidence 34589999999999999988899999998643 2233467899999999999999999999987654333335799999
Q ss_pred eccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCc
Q 041479 604 FMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSN 680 (771)
Q Consensus 604 ~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 680 (771)
||. ++|.+. ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 85 ~~~-~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~- 159 (338)
T cd07859 85 LME-SDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPT- 159 (338)
T ss_pred cCC-CCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEccCccccccccccCc-
Confidence 995 577655 34588999999999999999999986 8999999999999999999999999999854322211
Q ss_pred ccccccccccccccchh-----------------HHHHHHHHHhCCCCCCccccCCc--------------cHHHH----
Q 041479 681 QCSSVGLKGTVGYATPE-----------------YGILLLEIFTGKRPTSDMFTEGL--------------DLHNF---- 725 (771)
Q Consensus 681 ~~~~~~~~gt~~y~aPE-----------------~Gv~l~el~tg~~P~~~~~~~~~--------------~~~~~---- 725 (771)
........||+.|+||| +||++|||++|+.||.+...... ....+
T Consensus 160 ~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 239 (338)
T cd07859 160 AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEK 239 (338)
T ss_pred cccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhh
Confidence 11123356899999999 69999999999999964211000 00000
Q ss_pred ----HH---hhCCCch---hhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 726 ----VK---MALPDQI---LQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 726 ----~~---~~~~~~~---~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
.. ...+... ....++.+.....+||+.||++|||++|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~ 289 (338)
T cd07859 240 ARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALA 289 (338)
T ss_pred HHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 00 0000000 0123444445666999999999999999985
No 99
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.9e-31 Score=272.65 Aligned_cols=239 Identities=21% Similarity=0.262 Sum_probs=190.0
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhc--cCCCCceeEEEEeecCCCCCceeEEEEEE
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRN--IRHRNLVKIITACSTSDFQGNYFRALVYE 603 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~--l~H~nIv~l~~~~~~~~~~~~~~~~lv~e 603 (771)
...+|+|-||.||+|.|+.. .||||++...+ .+.+.+|.+|.+. +||+||+.+++.-..+. .....+|+|.|
T Consensus 216 ~e~IGkGRyGEVwrG~wrGe--~VAVKiF~srd---E~SWfrEtEIYqTvmLRHENILgFIaaD~~~~-gs~TQLwLvTd 289 (513)
T KOG2052|consen 216 QEIIGKGRFGEVWRGRWRGE--DVAVKIFSSRD---ERSWFRETEIYQTVMLRHENILGFIAADNKDN-GSWTQLWLVTD 289 (513)
T ss_pred EEEecCccccceeeccccCC--ceEEEEecccc---hhhhhhHHHHHHHHHhccchhhhhhhccccCC-CceEEEEEeee
Confidence 34679999999999999844 79999996544 3678888888886 49999999998865543 33357899999
Q ss_pred eccCCCCCCC--cccCCHHHHHHHHHHHHHHHHHHHhc-----CCCCeEecCCCCCCeeeCCCCceEEecccCccccCcc
Q 041479 604 FMHHGSLESC--PRILSFLRRLNIAIDVASALEYLHHH-----CKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676 (771)
Q Consensus 604 ~~~~g~L~~~--~~~l~~~~~~~i~~~ia~gL~~LH~~-----~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~ 676 (771)
|.+.|||.++ ...++....++++.-+|.||+|||.+ .+|.|.|||||+.|||+..++.+.|+|+|+|-.....
T Consensus 290 YHe~GSL~DyL~r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h~~~ 369 (513)
T KOG2052|consen 290 YHEHGSLYDYLNRNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSD 369 (513)
T ss_pred cccCCcHHHHHhhccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEEeccc
Confidence 9999999998 45688889999999999999999953 5789999999999999999999999999999765554
Q ss_pred cCCcccccccccccccccchh---------------------HHHHHHHHHhC----------CCCCCccccCCccHHHH
Q 041479 677 MSSNQCSSVGLKGTVGYATPE---------------------YGILLLEIFTG----------KRPTSDMFTEGLDLHNF 725 (771)
Q Consensus 677 ~~~~~~~~~~~~gt~~y~aPE---------------------~Gv~l~el~tg----------~~P~~~~~~~~~~~~~~ 725 (771)
...........+||.+||||| ||.|+||++.+ +.||.|..+.+..+.++
T Consensus 370 t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeM 449 (513)
T KOG2052|consen 370 TDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEEM 449 (513)
T ss_pred CCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHHH
Confidence 433344556678999999999 79999999864 45898887777777776
Q ss_pred HHhhCCCchhhhcCcccc---------ccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 726 VKMALPDQILQVLDPLFL---------VGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 726 ~~~~~~~~~~~~~~~~~~---------~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
.+.---.+.+..++..+. ..+..||..+|+.|-|+-.+-..|.++
T Consensus 450 rkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l 503 (513)
T KOG2052|consen 450 RKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKL 503 (513)
T ss_pred hcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHH
Confidence 544333333333333322 346699999999999998888877764
No 100
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.97 E-value=5e-31 Score=274.19 Aligned_cols=233 Identities=22% Similarity=0.284 Sum_probs=176.5
Q ss_pred ccccccceEEEEEecC---CCeEEEEEEeecc-chhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEe
Q 041479 529 YESLVKATVYKGILDL---DQTFIAVKVLFLH-QRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEF 604 (771)
Q Consensus 529 l~~~~~~~Vy~~~~~~---~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~ 604 (771)
+|+|.+|+||+|.+.+ ....||+|.+... .....+.+.+|+.+++.++||||+++++++...+. ..++||||
T Consensus 3 lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~----~~~lv~e~ 78 (262)
T cd05058 3 IGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEG----SPLVVLPY 78 (262)
T ss_pred ccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCC----CcEEEEec
Confidence 6899999999998754 3457999998543 33456789999999999999999999998764331 46899999
Q ss_pred ccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCc
Q 041479 605 MHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSN 680 (771)
Q Consensus 605 ~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 680 (771)
+++|+|.++ ....++..+..++.|++.|++|||+. +++||||||+||++++++.+|++|||+++.........
T Consensus 79 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~ 155 (262)
T cd05058 79 MKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYS 155 (262)
T ss_pred CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCccccccccCCccee
Confidence 999999776 23457778889999999999999985 89999999999999999999999999997554322111
Q ss_pred ccccccccccccccchh---------------HHHHHHHHHhC-CCCCCccccCCccHHHHHHhhCCCchhhhcCccccc
Q 041479 681 QCSSVGLKGTVGYATPE---------------YGILLLEIFTG-KRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFLV 744 (771)
Q Consensus 681 ~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg-~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 744 (771)
........+++.|+||| |||++|||++| ..||.+.. ...+...+....+...+..+.+.+..
T Consensus 156 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (262)
T cd05058 156 VHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVD--SFDITVYLLQGRRLLQPEYCPDPLYE 233 (262)
T ss_pred ecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCC--HHHHHHHHhcCCCCCCCCcCCHHHHH
Confidence 11122334677899999 69999999995 55665431 22233333332222223334445556
Q ss_pred cCcccChhchhhcCCHHHHHHHHHHh
Q 041479 745 GGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 745 ~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
.+.+||..+|++||++.++++.|+++
T Consensus 234 li~~cl~~~p~~Rp~~~~il~~l~~~ 259 (262)
T cd05058 234 VMLSCWHPKPEMRPTFSELVSRIEQI 259 (262)
T ss_pred HHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 67799999999999999999999986
No 101
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=99.97 E-value=2.4e-31 Score=292.09 Aligned_cols=231 Identities=20% Similarity=0.222 Sum_probs=174.7
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEE
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
...+|+|.+|+||+|++..+++.||||++.... ....+.+.+|++++++++|||||++++++.+.+ ..|+||
T Consensus 6 ~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~-----~~~lv~ 80 (381)
T cd05626 6 IKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKD-----NLYFVM 80 (381)
T ss_pred EEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCC-----EEEEEE
Confidence 345899999999999999999999999996542 334567899999999999999999999998776 789999
Q ss_pred EeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCC
Q 041479 603 EFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSS 679 (771)
Q Consensus 603 e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 679 (771)
||+++|+|.++ ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++........
T Consensus 81 E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~ 157 (381)
T cd05626 81 DYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNS 157 (381)
T ss_pred ecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHHEEECCCCCEEEeeCcCCccccccccc
Confidence 99999999766 34578888899999999999999985 9999999999999999999999999998643210000
Q ss_pred -------------------------------------------cccccccccccccccchh---------------HHHH
Q 041479 680 -------------------------------------------NQCSSVGLKGTVGYATPE---------------YGIL 701 (771)
Q Consensus 680 -------------------------------------------~~~~~~~~~gt~~y~aPE---------------~Gv~ 701 (771)
..+.....+||+.||||| +||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~i 237 (381)
T cd05626 158 KYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVI 237 (381)
T ss_pred ccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhhH
Confidence 000112357999999999 6999
Q ss_pred HHHHHhCCCCCCccccCCccHHHHHHhh--CCCchhhhcCccccccCcc--cChhchhhcCCHHHHHH
Q 041479 702 LLEIFTGKRPTSDMFTEGLDLHNFVKMA--LPDQILQVLDPLFLVGGVQ--EGEETAEENIKKGQIRE 765 (771)
Q Consensus 702 l~el~tg~~P~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~--cl~~~p~~Rpt~~~vl~ 765 (771)
+|||++|+.||....... ......... ........+++.......+ |+..+|..||++.++++
T Consensus 238 l~elltG~~Pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~ 304 (381)
T cd05626 238 LFEMLVGQPPFLAPTPTE-TQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKA 304 (381)
T ss_pred HHHHHhCCCCCcCCCHHH-HHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhc
Confidence 999999999997532211 111221111 1111111234444444333 77778888999999975
No 102
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.97 E-value=5.1e-31 Score=278.73 Aligned_cols=236 Identities=25% Similarity=0.336 Sum_probs=184.7
Q ss_pred ccccccccccccceEEEEEecC-----CCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCcee
Q 041479 523 LLLNVSYESLVKATVYKGILDL-----DQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYF 597 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~-----~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 597 (771)
+.....+|+|.+|.||+|+... +...||+|.+........+.+.+|++++++++||||+++++++...+ .
T Consensus 7 ~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~ 81 (291)
T cd05094 7 IVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGD-----P 81 (291)
T ss_pred eEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCC-----c
Confidence 3345568999999999998643 34579999987665556678999999999999999999999988766 6
Q ss_pred EEEEEEeccCCCCCCCc-------------------ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCC
Q 041479 598 RALVYEFMHHGSLESCP-------------------RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN 658 (771)
Q Consensus 598 ~~lv~e~~~~g~L~~~~-------------------~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~ 658 (771)
.++||||+++++|.++. ..+++..+..++.|++.|++|||+. +|+||||||+||+++.
T Consensus 82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil~~~ 158 (291)
T cd05094 82 LIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVGA 158 (291)
T ss_pred eEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEcc
Confidence 79999999999987651 2378899999999999999999985 8999999999999999
Q ss_pred CCceEEecccCccccCcccCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccH
Q 041479 659 DMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDL 722 (771)
Q Consensus 659 ~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~ 722 (771)
++.+|++|||+++....... ........|+..|+||| |||++|||+| |+.||...... ..
T Consensus 159 ~~~~~l~dfg~a~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~--~~ 234 (291)
T cd05094 159 NLLVKIGDFGMSRDVYSTDY--YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNT--EV 234 (291)
T ss_pred CCcEEECCCCcccccCCCce--eecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHH--HH
Confidence 99999999999975543221 11122345688899999 6999999999 99998653221 12
Q ss_pred HHHHHhhCCCchhhhcCccccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 723 HNFVKMALPDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 723 ~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
.+..............+..+.....+||++||++|||+.+|++.|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~ 282 (291)
T cd05094 235 IECITQGRVLERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHAL 282 (291)
T ss_pred HHHHhCCCCCCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHH
Confidence 233322222233334455566677799999999999999999999876
No 103
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=99.97 E-value=2.7e-31 Score=280.32 Aligned_cols=227 Identities=23% Similarity=0.299 Sum_probs=172.2
Q ss_pred ccccccccccceEEEEEecCCCeEEEEEEeeccc-hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEE
Q 041479 525 LNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYE 603 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e 603 (771)
....+|+|.+|+||+|+.+.+++.||+|+++... ......+.+|++++++++||||+++++++.+.+ ..++|||
T Consensus 9 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-----~~~lv~e 83 (288)
T cd07871 9 KLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTER-----CLTLVFE 83 (288)
T ss_pred EeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCC-----eEEEEEe
Confidence 3456899999999999999998999999996543 233457889999999999999999999987765 6899999
Q ss_pred eccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCC
Q 041479 604 FMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSS 679 (771)
Q Consensus 604 ~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 679 (771)
|+++ +|.++ ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 84 ~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~-- 157 (288)
T cd07871 84 YLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQNLLINEKGELKLADFGLARAKSVPT-- 157 (288)
T ss_pred CCCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEECcCcceeeccCCC--
Confidence 9975 77654 33478888999999999999999985 99999999999999999999999999997543221
Q ss_pred cccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHh---------------
Q 041479 680 NQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKM--------------- 728 (771)
Q Consensus 680 ~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~--------------- 728 (771)
.......|++.|+||| +||++|||++|+.||....... .+......
T Consensus 158 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 234 (288)
T cd07871 158 --KTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKE-ELHLIFRLLGTPTEETWPGITSN 234 (288)
T ss_pred --ccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCChHHhhccccc
Confidence 1122346899999999 6999999999999996432111 01111100
Q ss_pred ------hCCC-------chhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 729 ------ALPD-------QILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 729 ------~~~~-------~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
..+. .....+++...+...+|++.||++|||++|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 235 EEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred hhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 0000 000112333334555999999999999999975
No 104
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=99.97 E-value=2e-31 Score=268.97 Aligned_cols=232 Identities=24% Similarity=0.285 Sum_probs=174.0
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeeccch--hhHHHHHHHHHHHhccCCCC-ceeEEEEeecCCC-CCceeEEEE
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLHQR--GALKSFMAECQALRNIRHRN-LVKIITACSTSDF-QGNYFRALV 601 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~H~n-Iv~l~~~~~~~~~-~~~~~~~lv 601 (771)
.-.+|+|.+|+||+|+.+.+++.||+|+++...+ +......+|+.+++.++|+| ||++++++.+.+. ......++|
T Consensus 16 ~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~l~lv 95 (323)
T KOG0594|consen 16 VEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGKLYLV 95 (323)
T ss_pred HHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccceEEEE
Confidence 3448999999999999999999999999987643 45677899999999999999 9999999977552 222367899
Q ss_pred EEeccCCCCCCC----c---ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccC
Q 041479 602 YEFMHHGSLESC----P---RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIP 674 (771)
Q Consensus 602 ~e~~~~g~L~~~----~---~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~ 674 (771)
|||++. +|..+ . +.++...+..++.|+++||+|||++ +|+||||||+|||++++|.+||+|||+|+...
T Consensus 96 fe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~ 171 (323)
T KOG0594|consen 96 FEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLLISSSGVLKLADFGLARAFS 171 (323)
T ss_pred EEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEEECCCCcEeeeccchHHHhc
Confidence 999964 77555 2 3466678999999999999999996 99999999999999999999999999999554
Q ss_pred cccCCcccccccccccccccchh----------------HHHHHHHHHhCCCCCCccc--------------------cC
Q 041479 675 EVMSSNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMF--------------------TE 718 (771)
Q Consensus 675 ~~~~~~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~--------------------~~ 718 (771)
-... .-+..++|.+|+||| +||+++||++++.-|.+.. +.
T Consensus 172 ip~~----~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~ 247 (323)
T KOG0594|consen 172 IPMR----TYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPG 247 (323)
T ss_pred CCcc----cccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCC
Confidence 2221 123457899999999 5999999999988775432 21
Q ss_pred CccHHHHHHhhCCC-----chh---hhcCccccccCcccChhchhhcCCHHHHHHH
Q 041479 719 GLDLHNFVKMALPD-----QIL---QVLDPLFLVGGVQEGEETAEENIKKGQIRES 766 (771)
Q Consensus 719 ~~~~~~~~~~~~~~-----~~~---~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~ 766 (771)
...+.++-. .++. ... +..++...+...+|++.+|++|.|++.++.+
T Consensus 248 v~~~~~~k~-~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 248 VSSLPDYKA-PFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred ccccccccc-cCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 111111111 0100 000 1111122233448999999999999998864
No 105
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.97 E-value=5.1e-31 Score=276.58 Aligned_cols=224 Identities=21% Similarity=0.230 Sum_probs=174.3
Q ss_pred ccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEec
Q 041479 529 YESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFM 605 (771)
Q Consensus 529 l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~~ 605 (771)
+|+|.+|+||+++.+.+++.||+|.+.... ....+.+..|++++++++||||+++++++.+.. ..|+||||+
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~-----~~~lv~e~~ 75 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKT-----HLCLVMSLM 75 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCC-----eEEEEEecC
Confidence 589999999999999989999999996432 222345677999999999999999999987765 789999999
Q ss_pred cCCCCCCC-----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCc
Q 041479 606 HHGSLESC-----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSN 680 (771)
Q Consensus 606 ~~g~L~~~-----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 680 (771)
++|+|.+. ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 76 ~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~-- 150 (277)
T cd05607 76 NGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKT-- 150 (277)
T ss_pred CCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEEEcCCCCEEEeeceeeeecCCCce--
Confidence 99999654 23478888899999999999999985 999999999999999999999999999876543221
Q ss_pred ccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCc---hhhhcCccc
Q 041479 681 QCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQ---ILQVLDPLF 742 (771)
Q Consensus 681 ~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 742 (771)
.....|++.|+||| +||++||+++|+.||.+... .....++........ ....+++.+
T Consensus 151 ---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (277)
T cd05607 151 ---ITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKE-KVAKEELKRRTLEDEVKFEHQNFTEES 226 (277)
T ss_pred ---eeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcc-hhhHHHHHHHhhccccccccccCCHHH
Confidence 12245899999999 69999999999999965321 111222222222111 112345556
Q ss_pred cccCcccChhchhhcCCHHHHHHH
Q 041479 743 LVGGVQEGEETAEENIKKGQIRES 766 (771)
Q Consensus 743 ~~~~~~cl~~~p~~Rpt~~~vl~~ 766 (771)
.....+||+.||++||+++|+++.
T Consensus 227 ~~li~~~L~~~P~~R~~~~~~~~~ 250 (277)
T cd05607 227 KDICRLFLAKKPEDRLGSREKNDD 250 (277)
T ss_pred HHHHHHHhccCHhhCCCCccchhh
Confidence 667779999999999999776643
No 106
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=99.97 E-value=4.4e-31 Score=283.35 Aligned_cols=223 Identities=22% Similarity=0.229 Sum_probs=174.1
Q ss_pred cccccccceEEEEEec---CCCeEEEEEEeeccc----hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEE
Q 041479 528 SYESLVKATVYKGILD---LDQTFIAVKVLFLHQ----RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRAL 600 (771)
Q Consensus 528 ~l~~~~~~~Vy~~~~~---~~~~~vAvK~~~~~~----~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~l 600 (771)
.+|+|.+|+||+++.. ..++.||||++.... ......+.+|+++++.++||||+++++++.+.+ ..|+
T Consensus 3 ~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~-----~~~l 77 (323)
T cd05584 3 VLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGG-----KLYL 77 (323)
T ss_pred eeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCC-----eEEE
Confidence 4799999999999864 356799999996532 233456789999999999999999999988766 7899
Q ss_pred EEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCccc
Q 041479 601 VYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVM 677 (771)
Q Consensus 601 v~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~ 677 (771)
||||+++|+|.+. ...+.+..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 154 (323)
T cd05584 78 ILEYLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEG 154 (323)
T ss_pred EEeCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEeeCcCCeecccCC
Confidence 9999999999765 34567788888999999999999985 99999999999999999999999999987533221
Q ss_pred CCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCccc
Q 041479 678 SSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLF 742 (771)
Q Consensus 678 ~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 742 (771)
. ......||+.|+||| +||++|||++|+.||.+.... ..+...... ....+..+++.+
T Consensus 155 ~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~-~~~~~~~~~--~~~~~~~~~~~~ 227 (323)
T cd05584 155 T----VTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRK-KTIDKILKG--KLNLPPYLTPEA 227 (323)
T ss_pred C----cccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHH-HHHHHHHcC--CCCCCCCCCHHH
Confidence 1 122356999999999 699999999999999653211 112222221 123344455666
Q ss_pred cccCcccChhchhhcC-----CHHHHHH
Q 041479 743 LVGGVQEGEETAEENI-----KKGQIRE 765 (771)
Q Consensus 743 ~~~~~~cl~~~p~~Rp-----t~~~vl~ 765 (771)
.....+|+++||++|| ++.++++
T Consensus 228 ~~li~~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 228 RDLLKKLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred HHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence 6677799999999999 7777764
No 107
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=99.97 E-value=4.1e-31 Score=283.46 Aligned_cols=223 Identities=22% Similarity=0.212 Sum_probs=174.6
Q ss_pred cccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhcc-CCCCceeEEEEeecCCCCCceeEEEEEE
Q 041479 528 SYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNI-RHRNLVKIITACSTSDFQGNYFRALVYE 603 (771)
Q Consensus 528 ~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~~~~lv~e 603 (771)
.+|+|.+|+||+|+++.+++.||||++.... ....+.+..|.+++..+ +||||+++++++.+.+ ..|+|||
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~-----~~~lv~E 76 (321)
T cd05591 2 VLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKD-----RLFFVME 76 (321)
T ss_pred ccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCC-----eEEEEEe
Confidence 3799999999999999988899999996542 34456788899999876 7999999999988776 7899999
Q ss_pred eccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCc
Q 041479 604 FMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSN 680 (771)
Q Consensus 604 ~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 680 (771)
|+++|+|... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 77 ~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~--- 150 (321)
T cd05591 77 YVNGGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNG--- 150 (321)
T ss_pred CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeecccceecccCC---
Confidence 9999999654 34678889999999999999999986 89999999999999999999999999987532211
Q ss_pred ccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCcccccc
Q 041479 681 QCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFLVG 745 (771)
Q Consensus 681 ~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 745 (771)
......+||+.|+||| +||++|||++|+.||...... ..+....... ...+..+++.+...
T Consensus 151 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~-~~~~~i~~~~--~~~p~~~~~~~~~l 226 (321)
T cd05591 151 -VTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNED-DLFESILHDD--VLYPVWLSKEAVSI 226 (321)
T ss_pred -ccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHH-HHHHHHHcCC--CCCCCCCCHHHHHH
Confidence 1122356899999999 699999999999999753211 1111222111 11223345555566
Q ss_pred CcccChhchhhcC-------CHHHHHH
Q 041479 746 GVQEGEETAEENI-------KKGQIRE 765 (771)
Q Consensus 746 ~~~cl~~~p~~Rp-------t~~~vl~ 765 (771)
..+|+++||++|| ++.++++
T Consensus 227 l~~~L~~dp~~R~~~~~~~~~~~~~~~ 253 (321)
T cd05591 227 LKAFMTKNPNKRLGCVASQGGEDAIKQ 253 (321)
T ss_pred HHHHhccCHHHcCCCCCCCCCHHHHhc
Confidence 6799999999999 7777764
No 108
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.97 E-value=4.2e-31 Score=305.17 Aligned_cols=238 Identities=18% Similarity=0.206 Sum_probs=178.0
Q ss_pred ccccccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEE
Q 041479 525 LNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALV 601 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv 601 (771)
....+|+|++|+||+|++..+++.||||++.... ....++|.+|++++++++|||||++++++.+.+ ..|+|
T Consensus 6 Ii~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~-----~lyLV 80 (932)
T PRK13184 6 IIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGD-----PVYYT 80 (932)
T ss_pred EEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCC-----EEEEE
Confidence 3446899999999999999888899999996432 334568999999999999999999999988776 78999
Q ss_pred EEeccCCCCCCCc--------------ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecc
Q 041479 602 YEFMHHGSLESCP--------------RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDF 667 (771)
Q Consensus 602 ~e~~~~g~L~~~~--------------~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~Df 667 (771)
|||++||+|.++. ...++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 81 MEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLKPeNILLd~dg~vKLiDF 157 (932)
T PRK13184 81 MPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLKPDNILLGLFGEVVILDW 157 (932)
T ss_pred EEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCchheEEEcCCCCEEEEec
Confidence 9999999996541 2345667889999999999999985 8999999999999999999999999
Q ss_pred cCccccCcccC--------------Ccccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccC
Q 041479 668 GLTRFIPEVMS--------------SNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTE 718 (771)
Q Consensus 668 Gla~~~~~~~~--------------~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~ 718 (771)
|+++....... .........+||+.||||| +||++|||+||+.||......
T Consensus 158 GLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ 237 (932)
T PRK13184 158 GAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGR 237 (932)
T ss_pred CcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchh
Confidence 99986521110 0011112356999999999 699999999999999652211
Q ss_pred CccHHHHHHhhCCCchhhhcCccccccCcccChhchhhcC-CHHHHHHHHHHh
Q 041479 719 GLDLHNFVKMALPDQILQVLDPLFLVGGVQEGEETAEENI-KKGQIRESLIAI 770 (771)
Q Consensus 719 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rp-t~~~vl~~L~~~ 770 (771)
...................+++.+.....+|+..||++|| ++.++++.|++.
T Consensus 238 ki~~~~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~ 290 (932)
T PRK13184 238 KISYRDVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPH 290 (932)
T ss_pred hhhhhhhccChhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 1111111100000011123344555566799999999996 677777777664
No 109
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=99.97 E-value=4.7e-31 Score=282.06 Aligned_cols=222 Identities=23% Similarity=0.253 Sum_probs=174.0
Q ss_pred cccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhcc-CCCCceeEEEEeecCCCCCceeEEEEEE
Q 041479 528 SYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNI-RHRNLVKIITACSTSDFQGNYFRALVYE 603 (771)
Q Consensus 528 ~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~~~~lv~e 603 (771)
.+|+|.+|+||+|++..+++.||||+++... ....+.+..|..++... +||||+++++++.+.+ ..|+|||
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~-----~~~lv~e 76 (316)
T cd05619 2 MLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKE-----NLFFVME 76 (316)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCC-----EEEEEEe
Confidence 4799999999999999988899999997542 23456677888888764 8999999999988776 7899999
Q ss_pred eccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCc
Q 041479 604 FMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSN 680 (771)
Q Consensus 604 ~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 680 (771)
|+++|+|..+ ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 77 y~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~--- 150 (316)
T cd05619 77 YLNGGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGD--- 150 (316)
T ss_pred CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEccCCcceECCCCC---
Confidence 9999999766 24588899999999999999999985 99999999999999999999999999987432211
Q ss_pred ccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCcccccc
Q 041479 681 QCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFLVG 745 (771)
Q Consensus 681 ~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 745 (771)
.......||+.|+||| +||++|||++|+.||.+... ..+.+...... ...+..++..+...
T Consensus 151 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~--~~~~~~i~~~~-~~~~~~~~~~~~~l 226 (316)
T cd05619 151 -AKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDE--EELFQSIRMDN-PCYPRWLTREAKDI 226 (316)
T ss_pred -CceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCH--HHHHHHHHhCC-CCCCccCCHHHHHH
Confidence 1122356899999999 69999999999999965321 12222222211 12233345555566
Q ss_pred CcccChhchhhcCCHH-HHH
Q 041479 746 GVQEGEETAEENIKKG-QIR 764 (771)
Q Consensus 746 ~~~cl~~~p~~Rpt~~-~vl 764 (771)
..+|++.||++||++. ++.
T Consensus 227 i~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05619 227 LVKLFVREPERRLGVKGDIR 246 (316)
T ss_pred HHHHhccCHhhcCCChHHHH
Confidence 6799999999999997 554
No 110
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.4e-32 Score=292.36 Aligned_cols=228 Identities=22% Similarity=0.255 Sum_probs=188.4
Q ss_pred cccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEE
Q 041479 524 LLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYE 603 (771)
Q Consensus 524 ~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e 603 (771)
..+..+|.|.+|+||.|++..+...+|||-+........+-+..||.+.++++|.|||+++|.+.+.+ +.-|.||
T Consensus 578 ~ervVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senG-----f~kIFME 652 (1226)
T KOG4279|consen 578 NERVVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENG-----FFKIFME 652 (1226)
T ss_pred CceEEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCC-----eEEEEee
Confidence 35678999999999999999999999999998777777788999999999999999999999987776 6789999
Q ss_pred eccCCCCCCC----cccC--CHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCC-CCceEEecccCccccCcc
Q 041479 604 FMHHGSLESC----PRIL--SFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN-DMTAHMGDFGLTRFIPEV 676 (771)
Q Consensus 604 ~~~~g~L~~~----~~~l--~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~-~~~~kl~DfGla~~~~~~ 676 (771)
-++||+|... -.++ .+...-.+..||++||.|||++ .|||||||-+|||+.. .|.+||+|||.++.+..-
T Consensus 653 qVPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAgi 729 (1226)
T KOG4279|consen 653 QVPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGI 729 (1226)
T ss_pred cCCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEEEeeccceEEecccccchhhccC
Confidence 9999999766 2344 5667888999999999999997 8999999999999974 799999999999876543
Q ss_pred cCCcccccccccccccccchh-----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCC--Cchhhh
Q 041479 677 MSSNQCSSVGLKGTVGYATPE-----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALP--DQILQV 737 (771)
Q Consensus 677 ~~~~~~~~~~~~gt~~y~aPE-----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~--~~~~~~ 737 (771)
.. + ..++.||..||||| |||++.||.||++||.+.-... ...+..+.+. ++++..
T Consensus 730 nP---~-TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgspq--AAMFkVGmyKvHP~iPee 803 (1226)
T KOG4279|consen 730 NP---C-TETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQ--AAMFKVGMYKVHPPIPEE 803 (1226)
T ss_pred Cc---c-ccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChh--HhhhhhcceecCCCCcHH
Confidence 32 1 23467999999999 7999999999999997653222 2222233332 556666
Q ss_pred cCccccccCcccChhchhhcCCHHHHHH
Q 041479 738 LDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 738 ~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
++..-+....+|..+||.+||++.++++
T Consensus 804 lsaeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 804 LSAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred HHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 6666666677999999999999999875
No 111
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.8e-32 Score=287.04 Aligned_cols=222 Identities=20% Similarity=0.209 Sum_probs=182.2
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEE
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
.-.+|.|+||.||-|++..+.+.||||++.-.. ....+++++|+..+.+++|||+|.+.|+|.... ..|+||
T Consensus 31 LrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~-----TaWLVM 105 (948)
T KOG0577|consen 31 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREH-----TAWLVM 105 (948)
T ss_pred HHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccc-----hHHHHH
Confidence 345899999999999999999999999995443 234578999999999999999999999988766 679999
Q ss_pred EeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccC
Q 041479 603 EFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMS 678 (771)
Q Consensus 603 e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 678 (771)
|||-| +-.+. .+++.+.++..|+.+++.||+|||+. +.||||||+.|||+.+.|.||++|||.|..+.+.
T Consensus 106 EYClG-SAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PA-- 179 (948)
T KOG0577|consen 106 EYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSEPGLVKLADFGSASIMAPA-- 179 (948)
T ss_pred HHHhc-cHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecCCCeeeeccccchhhcCch--
Confidence 99964 54443 67888999999999999999999997 8999999999999999999999999999865543
Q ss_pred Ccccccccccccccccchh------------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCc
Q 041479 679 SNQCSSVGLKGTVGYATPE------------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDP 740 (771)
Q Consensus 679 ~~~~~~~~~~gt~~y~aPE------------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 740 (771)
.+++|||+||||| +||+..|+...++|+..+.+... ++.++....|.-...-++.
T Consensus 180 ------nsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSA-LYHIAQNesPtLqs~eWS~ 252 (948)
T KOG0577|consen 180 ------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA-LYHIAQNESPTLQSNEWSD 252 (948)
T ss_pred ------hcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHH-HHHHHhcCCCCCCCchhHH
Confidence 3478999999999 69999999999999876544332 5555555555333333344
Q ss_pred cccccCcccChhchhhcCCHHHHHH
Q 041479 741 LFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 741 ~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
.+......|+++-|.+|||..+++.
T Consensus 253 ~F~~Fvd~CLqKipqeRptse~ll~ 277 (948)
T KOG0577|consen 253 YFRNFVDSCLQKIPQERPTSEELLK 277 (948)
T ss_pred HHHHHHHHHHhhCcccCCcHHHHhh
Confidence 4455566999999999999988875
No 112
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=99.97 E-value=2.7e-31 Score=280.29 Aligned_cols=228 Identities=21% Similarity=0.234 Sum_probs=175.9
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEE
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYE 603 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e 603 (771)
...+|+|.+|+||+|+++.+++.||||++.... ....+.+.+|++++++++||||+++++++...+ ..|+|||
T Consensus 6 ~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~~lv~e 80 (287)
T cd07848 6 LGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRG-----KLYLVFE 80 (287)
T ss_pred EEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCC-----EEEEEEe
Confidence 345799999999999999999999999996542 334567889999999999999999999987766 7899999
Q ss_pred eccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCc
Q 041479 604 FMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSN 680 (771)
Q Consensus 604 ~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 680 (771)
|++++.+... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~-- 155 (287)
T cd07848 81 YVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSN-- 155 (287)
T ss_pred cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccCccccccccc--
Confidence 9998876544 34578889999999999999999985 999999999999999999999999999986543221
Q ss_pred ccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHH--hhCCC-----------
Q 041479 681 QCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVK--MALPD----------- 732 (771)
Q Consensus 681 ~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~--~~~~~----------- 732 (771)
.......||+.|+||| +||++|||++|+.||.+..... .+..... +..+.
T Consensus 156 -~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (287)
T cd07848 156 -ANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEID-QLFTIQKVLGPLPAEQMKLFYSNPR 233 (287)
T ss_pred -ccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhhCCCCHHHHHhhhccch
Confidence 1122346899999999 6999999999999996532111 0111100 00000
Q ss_pred -----------------chhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 733 -----------------QILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 733 -----------------~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
.....++..+.....+|++.||++|||+.++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 234 FHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred hcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 001123444555667999999999999999875
No 113
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.97 E-value=6.3e-31 Score=273.31 Aligned_cols=233 Identities=23% Similarity=0.329 Sum_probs=182.1
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
+.....+|+|.+|+||+|....+ +.||+|.+.... ...+.+.+|+.++++++||||+++++++...+ ..++||
T Consensus 8 ~~~~~~lg~g~~g~v~~~~~~~~-~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~lv~ 80 (261)
T cd05072 8 IKLVKKLGAGQFGEVWMGYYNNS-TKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEE-----PIYIIT 80 (261)
T ss_pred eEEeeecCCcCCceEEEEEecCC-ceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC-----CcEEEE
Confidence 33455689999999999997655 489999986433 24578999999999999999999999987665 679999
Q ss_pred EeccCCCCCCC-----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCccc
Q 041479 603 EFMHHGSLESC-----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVM 677 (771)
Q Consensus 603 e~~~~g~L~~~-----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~ 677 (771)
||+++|+|.++ ...+++.++..++.|++.||+|||+. +++||||||+||+++.++.+|++|||+++......
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~ 157 (261)
T cd05072 81 EYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNE 157 (261)
T ss_pred ecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEecCCCcEEECCCccceecCCCc
Confidence 99999999765 24578888999999999999999985 89999999999999999999999999998654322
Q ss_pred CCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhhhcCcc
Q 041479 678 SSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPL 741 (771)
Q Consensus 678 ~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 741 (771)
. .......++..|+||| +||++||++| |+.||.+... ...........+......++..
T Consensus 158 ~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 232 (261)
T cd05072 158 Y---TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSN--SDVMSALQRGYRMPRMENCPDE 232 (261)
T ss_pred e---eccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCH--HHHHHHHHcCCCCCCCCCCCHH
Confidence 1 1112234677899999 6999999999 9999965321 1233333333332222334455
Q ss_pred ccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 742 FLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 742 ~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
+.....+|+..+|++|||+.++++.|+++
T Consensus 233 ~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 233 LYDIMKTCWKEKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred HHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence 55667799999999999999999999864
No 114
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.97 E-value=4.1e-31 Score=280.06 Aligned_cols=228 Identities=21% Similarity=0.246 Sum_probs=181.5
Q ss_pred ccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEe
Q 041479 525 LNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEF 604 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~ 604 (771)
....+|+|.+|+||+|+...+++.||+|.+........+.+.+|+.+++.++||||+++++++.... ..|+||||
T Consensus 24 ~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~-----~~~lv~e~ 98 (296)
T cd06654 24 RFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGD-----ELWVVMEY 98 (296)
T ss_pred eEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCC-----EEEEeecc
Confidence 3445899999999999998888899999997665555678999999999999999999999988765 78999999
Q ss_pred ccCCCCCCC--cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCccc
Q 041479 605 MHHGSLESC--PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQC 682 (771)
Q Consensus 605 ~~~g~L~~~--~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 682 (771)
+++|+|.++ ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 99 ~~~~~L~~~~~~~~~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~---- 171 (296)
T cd06654 99 LAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS---- 171 (296)
T ss_pred cCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEECccccchhcccccc----
Confidence 999999876 33578899999999999999999985 899999999999999999999999999876433221
Q ss_pred ccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCC-CchhhhcCccccccC
Q 041479 683 SSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALP-DQILQVLDPLFLVGG 746 (771)
Q Consensus 683 ~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 746 (771)
......|++.|+||| |||++|||++|+.||.+...... +..+.....+ ...+..+++.+....
T Consensus 172 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li 250 (296)
T cd06654 172 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA-LYLIATNGTPELQNPEKLSAIFRDFL 250 (296)
T ss_pred ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHh-HHHHhcCCCCCCCCccccCHHHHHHH
Confidence 112345889999999 69999999999999965322111 2222221111 122333445555566
Q ss_pred cccChhchhhcCCHHHHHH
Q 041479 747 VQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 747 ~~cl~~~p~~Rpt~~~vl~ 765 (771)
.+||..+|++|||+.|+++
T Consensus 251 ~~~l~~~p~~Rpt~~eil~ 269 (296)
T cd06654 251 NRCLDMDVEKRGSAKELLQ 269 (296)
T ss_pred HHHCcCCcccCcCHHHHhh
Confidence 7999999999999999986
No 115
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.97 E-value=6.4e-31 Score=276.80 Aligned_cols=233 Identities=21% Similarity=0.299 Sum_probs=182.5
Q ss_pred ccccccccccceEEEEEec----CCCeEEEEEEeeccc-hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEE
Q 041479 525 LNVSYESLVKATVYKGILD----LDQTFIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRA 599 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~----~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 599 (771)
....+|+|.+|+||+|++. .+++.||+|.+.... .....++.+|++++++++||||+++++++...+ ..|
T Consensus 9 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-----~~~ 83 (283)
T cd05090 9 FMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQ-----PVC 83 (283)
T ss_pred eeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCC-----ceE
Confidence 3456899999999999853 345689999996433 334568999999999999999999999987766 679
Q ss_pred EEEEeccCCCCCCCc--------------------ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCC
Q 041479 600 LVYEFMHHGSLESCP--------------------RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDND 659 (771)
Q Consensus 600 lv~e~~~~g~L~~~~--------------------~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~ 659 (771)
+||||+++|+|.++. ..+++.+...++.|++.||+|||+. +|+||||||+||+++++
T Consensus 84 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~nili~~~ 160 (283)
T cd05090 84 MLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH---FFVHKDLAARNILIGEQ 160 (283)
T ss_pred EEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc---CeehhccccceEEEcCC
Confidence 999999999986541 2367888899999999999999985 89999999999999999
Q ss_pred CceEEecccCccccCcccCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHH
Q 041479 660 MTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLH 723 (771)
Q Consensus 660 ~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~ 723 (771)
+.+|++|||+++....... ........++..|+||| +||++|||++ |..||.+.. ...+.
T Consensus 161 ~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~--~~~~~ 236 (283)
T cd05090 161 LHVKISDLGLSREIYSADY--YRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFS--NQEVI 236 (283)
T ss_pred CcEEeccccccccccCCcc--eecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCC--HHHHH
Confidence 9999999999986543221 11122334677899999 6999999999 998986431 12334
Q ss_pred HHHHhhCCCchhhhcCccccccCcccChhchhhcCCHHHHHHHHHH
Q 041479 724 NFVKMALPDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIA 769 (771)
Q Consensus 724 ~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~ 769 (771)
+..........+..+++.+.....+||++||++||++.++.+.|..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 237 EMVRKRQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred HHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 4444333333445556666677779999999999999999999875
No 116
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.97 E-value=5.5e-31 Score=285.02 Aligned_cols=239 Identities=22% Similarity=0.285 Sum_probs=181.9
Q ss_pred ccccccccccccceEEEEEec-----CCCeEEEEEEeeccc-hhhHHHHHHHHHHHhcc-CCCCceeEEEEeecCCCCCc
Q 041479 523 LLLNVSYESLVKATVYKGILD-----LDQTFIAVKVLFLHQ-RGALKSFMAECQALRNI-RHRNLVKIITACSTSDFQGN 595 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~-----~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~ 595 (771)
+.....+|+|.+|+||+|++. .+++.||||+++... ......+.+|+.++.++ +|||||++++++...+.
T Consensus 9 ~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~--- 85 (343)
T cd05103 9 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG--- 85 (343)
T ss_pred hcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCC---
Confidence 334556899999999999853 346789999996543 33456789999999999 68999999998865442
Q ss_pred eeEEEEEEeccCCCCCCCc-------------------------------------------------------------
Q 041479 596 YFRALVYEFMHHGSLESCP------------------------------------------------------------- 614 (771)
Q Consensus 596 ~~~~lv~e~~~~g~L~~~~------------------------------------------------------------- 614 (771)
..++||||+++|+|.++.
T Consensus 86 -~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (343)
T cd05103 86 -PLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEE 164 (343)
T ss_pred -ceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhh
Confidence 568999999999985431
Q ss_pred ---------ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCcccccc
Q 041479 615 ---------RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSV 685 (771)
Q Consensus 615 ---------~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~ 685 (771)
..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+|++|||+++....... .....
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~--~~~~~ 239 (343)
T cd05103 165 EAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSENNVVKICDFGLARDIYKDPD--YVRKG 239 (343)
T ss_pred hhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEcCCCcEEEEecccccccccCcc--hhhcC
Confidence 1357778899999999999999985 999999999999999999999999999986533221 11111
Q ss_pred cccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhhhcCccccccCccc
Q 041479 686 GLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFLVGGVQE 749 (771)
Q Consensus 686 ~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c 749 (771)
...+++.|+||| ||+++||+++ |..||.+.... ..+............+...++.+...+..|
T Consensus 240 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c 318 (343)
T cd05103 240 DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-EEFCRRLKEGTRMRAPDYTTPEMYQTMLDC 318 (343)
T ss_pred CCCCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCcccc-HHHHHHHhccCCCCCCCCCCHHHHHHHHHH
Confidence 234567899999 6999999997 99998754222 122233333333333444566666677799
Q ss_pred ChhchhhcCCHHHHHHHHHHhC
Q 041479 750 GEETAEENIKKGQIRESLIAIL 771 (771)
Q Consensus 750 l~~~p~~Rpt~~~vl~~L~~~l 771 (771)
|+.||++|||+.|+++.|+.++
T Consensus 319 l~~~p~~Rps~~eil~~l~~~~ 340 (343)
T cd05103 319 WHGEPSQRPTFSELVEHLGNLL 340 (343)
T ss_pred ccCChhhCcCHHHHHHHHHHHH
Confidence 9999999999999999999874
No 117
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.97 E-value=1e-30 Score=274.61 Aligned_cols=233 Identities=20% Similarity=0.245 Sum_probs=179.4
Q ss_pred ccccccccccceEEEEEecCCCe----EEEEEEeeccc-hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEE
Q 041479 525 LNVSYESLVKATVYKGILDLDQT----FIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRA 599 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~~~~----~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 599 (771)
....+|+|++|+||+|++..+++ .||+|.+.... .....++..|+.++++++||||+++++++... ..+
T Consensus 11 ~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~~------~~~ 84 (279)
T cd05111 11 KLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPGA------SLQ 84 (279)
T ss_pred eccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECCC------ccE
Confidence 34568999999999999876664 47778775332 23346788899999999999999999987543 357
Q ss_pred EEEEeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCc
Q 041479 600 LVYEFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPE 675 (771)
Q Consensus 600 lv~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~ 675 (771)
+++||+++|+|.++ ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.+|++|||+++....
T Consensus 85 ~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~ 161 (279)
T cd05111 85 LVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNILLKSDSIVQIADFGVADLLYP 161 (279)
T ss_pred EEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEEcCCccceeccC
Confidence 89999999999866 34578999999999999999999985 899999999999999999999999999986543
Q ss_pred ccCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhhhcC
Q 041479 676 VMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQVLD 739 (771)
Q Consensus 676 ~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 739 (771)
... ........|+..|+||| |||++||+++ |+.||.+... ....++.........+...+
T Consensus 162 ~~~--~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~ 237 (279)
T cd05111 162 DDK--KYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRP--HEVPDLLEKGERLAQPQICT 237 (279)
T ss_pred CCc--ccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHHHCCCcCCCCCCCC
Confidence 321 11122345778899999 6999999998 9999976422 22334444333322233334
Q ss_pred ccccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 740 PLFLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 740 ~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
..+.....+||..||++|||+.|+++.|+.+
T Consensus 238 ~~~~~li~~c~~~~p~~Rps~~el~~~l~~~ 268 (279)
T cd05111 238 IDVYMVMVKCWMIDENVRPTFKELANEFTRM 268 (279)
T ss_pred HHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence 4444556699999999999999999998765
No 118
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.97 E-value=4.2e-31 Score=288.53 Aligned_cols=232 Identities=18% Similarity=0.135 Sum_probs=179.6
Q ss_pred cccccccccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeE
Q 041479 522 DLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFR 598 (771)
Q Consensus 522 ~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 598 (771)
++.....+|+|.+|+||+++.+.+++.||||++.... ....+.+.+|+.+++.++||||+++++++.+.+ ..
T Consensus 44 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~-----~~ 118 (370)
T cd05596 44 DFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDK-----YL 118 (370)
T ss_pred HcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCC-----EE
Confidence 4445566899999999999999999999999996432 233456889999999999999999999988776 78
Q ss_pred EEEEEeccCCCCCCC--cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcc
Q 041479 599 ALVYEFMHHGSLESC--PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676 (771)
Q Consensus 599 ~lv~e~~~~g~L~~~--~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~ 676 (771)
|+||||+++|+|.++ ...++...+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 119 ~lv~Ey~~gg~L~~~l~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~ 195 (370)
T cd05596 119 YMVMEYMPGGDLVNLMSNYDIPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDAN 195 (370)
T ss_pred EEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEcCCCCEEEEeccceeeccCC
Confidence 999999999999776 23577888889999999999999985 9999999999999999999999999999865432
Q ss_pred cCCcccccccccccccccchh-------------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchh--
Q 041479 677 MSSNQCSSVGLKGTVGYATPE-------------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQIL-- 735 (771)
Q Consensus 677 ~~~~~~~~~~~~gt~~y~aPE-------------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~-- 735 (771)
.. ......+||+.||||| +||++|||++|+.||.+.... ..+.+..........+
T Consensus 196 ~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~ 271 (370)
T cd05596 196 GM---VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV-GTYSKIMDHKNSLTFPDD 271 (370)
T ss_pred Cc---ccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHH-HHHHHHHcCCCcCCCCCc
Confidence 21 1122456999999999 699999999999999753211 1122222221111111
Q ss_pred hhcCccccccCcccChhchhh--cCCHHHHHH
Q 041479 736 QVLDPLFLVGGVQEGEETAEE--NIKKGQIRE 765 (771)
Q Consensus 736 ~~~~~~~~~~~~~cl~~~p~~--Rpt~~~vl~ 765 (771)
..++........+|+..+|++ |||+.|+++
T Consensus 272 ~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~ 303 (370)
T cd05596 272 IEISKQAKDLICAFLTDREVRLGRNGVDEIKS 303 (370)
T ss_pred CCCCHHHHHHHHHHccChhhccCCCCHHHHhc
Confidence 123444445566999989988 999999975
No 119
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=99.97 E-value=7.1e-31 Score=281.96 Aligned_cols=224 Identities=23% Similarity=0.260 Sum_probs=172.6
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHH---hccCCCCceeEEEEeecCCCCCceeEEE
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQAL---RNIRHRNLVKIITACSTSDFQGNYFRAL 600 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l---~~l~H~nIv~l~~~~~~~~~~~~~~~~l 600 (771)
..+|+|.+|+||+|++..+++.||||++.... ....+.+.+|++++ +.++||||+++++++.+.+ ..|+
T Consensus 5 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~-----~~~l 79 (324)
T cd05589 5 AVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTED-----HVCF 79 (324)
T ss_pred EEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCC-----EEEE
Confidence 35799999999999999988999999997542 23345677776665 5668999999999988776 7899
Q ss_pred EEEeccCCCCCCC--cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccC
Q 041479 601 VYEFMHHGSLESC--PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMS 678 (771)
Q Consensus 601 v~e~~~~g~L~~~--~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 678 (771)
||||+++|+|... ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 80 v~E~~~~~~L~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~- 155 (324)
T cd05589 80 VMEYAAGGDLMMHIHTDVFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFG- 155 (324)
T ss_pred EEcCCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCcEEeCcccCCccCCCCC-
Confidence 9999999999655 34689999999999999999999985 99999999999999999999999999987432211
Q ss_pred Ccccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCcccc
Q 041479 679 SNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFL 743 (771)
Q Consensus 679 ~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 743 (771)
......+||+.||||| +||++|||++|+.||.+.... .....+.... ...+..+++.+.
T Consensus 156 ---~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~-~~~~~i~~~~--~~~p~~~~~~~~ 229 (324)
T cd05589 156 ---DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEE-EVFDSIVNDE--VRYPRFLSREAI 229 (324)
T ss_pred ---CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhCC--CCCCCCCCHHHH
Confidence 1122456999999999 699999999999999653211 1111222211 122334455555
Q ss_pred ccCcccChhchhhcC-----CHHHHHH
Q 041479 744 VGGVQEGEETAEENI-----KKGQIRE 765 (771)
Q Consensus 744 ~~~~~cl~~~p~~Rp-----t~~~vl~ 765 (771)
....+|++.||++|| ++.++++
T Consensus 230 ~li~~~L~~dP~~R~~~~~~~~~~l~~ 256 (324)
T cd05589 230 SIMRRLLRRNPERRLGSGEKDAEDVKK 256 (324)
T ss_pred HHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence 667799999999999 4555544
No 120
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.97 E-value=6.3e-31 Score=281.13 Aligned_cols=222 Identities=22% Similarity=0.227 Sum_probs=173.8
Q ss_pred cccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhcc-CCCCceeEEEEeecCCCCCceeEEEEEE
Q 041479 528 SYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNI-RHRNLVKIITACSTSDFQGNYFRALVYE 603 (771)
Q Consensus 528 ~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~~~~lv~e 603 (771)
.+|+|.+|.||+|+++.+++.||||+++... ....+.+..|..++... +||||+++++++.+.+ ..|+|||
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~-----~~~lv~E 76 (316)
T cd05620 2 VLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKE-----HLFFVME 76 (316)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCC-----EEEEEEC
Confidence 3789999999999999999999999997542 23456677888888764 8999999999988766 7899999
Q ss_pred eccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCc
Q 041479 604 FMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSN 680 (771)
Q Consensus 604 ~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 680 (771)
|+++|+|..+ ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 77 ~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--- 150 (316)
T cd05620 77 FLNGGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGD--- 150 (316)
T ss_pred CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEeCccCCCeecccCC---
Confidence 9999999765 34678889999999999999999986 99999999999999999999999999987432111
Q ss_pred ccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCcccccc
Q 041479 681 QCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFLVG 745 (771)
Q Consensus 681 ~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 745 (771)
......+||+.|+||| +||++|||++|+.||.+... ..+.+...... ...+..+++.+...
T Consensus 151 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~l 226 (316)
T cd05620 151 -NRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDE--DELFESIRVDT-PHYPRWITKESKDI 226 (316)
T ss_pred -CceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH--HHHHHHHHhCC-CCCCCCCCHHHHHH
Confidence 1123456999999999 69999999999999964321 11222222221 22333455556666
Q ss_pred CcccChhchhhcCCHH-HHH
Q 041479 746 GVQEGEETAEENIKKG-QIR 764 (771)
Q Consensus 746 ~~~cl~~~p~~Rpt~~-~vl 764 (771)
..+|++.||++||++. ++.
T Consensus 227 i~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 227 LEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred HHHHccCCHHHcCCChHHHH
Confidence 7799999999999985 554
No 121
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.97 E-value=7.1e-31 Score=272.87 Aligned_cols=232 Identities=26% Similarity=0.378 Sum_probs=186.8
Q ss_pred cccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEE
Q 041479 524 LLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYE 603 (771)
Q Consensus 524 ~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e 603 (771)
.....+|+|.+|+||+|.++. ++.||+|.+.........++.+|+++++.++||||+++++++.+.+ ..++|||
T Consensus 9 ~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-----~~~lv~e 82 (261)
T cd05148 9 TLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGE-----PVYIITE 82 (261)
T ss_pred HHhhhhccCCCccEEEeEecC-CCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCC-----CeEEEEe
Confidence 344567999999999999988 5699999997665555678999999999999999999999988776 6799999
Q ss_pred eccCCCCCCC-----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccC
Q 041479 604 FMHHGSLESC-----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMS 678 (771)
Q Consensus 604 ~~~~g~L~~~-----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 678 (771)
|+++|+|.++ ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+|++|||.+........
T Consensus 83 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~ 159 (261)
T cd05148 83 LMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVY 159 (261)
T ss_pred ecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEcCCceEEEccccchhhcCCccc
Confidence 9999999776 23578999999999999999999985 899999999999999999999999999986543221
Q ss_pred Ccccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhhhcCccc
Q 041479 679 SNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLF 742 (771)
Q Consensus 679 ~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 742 (771)
...+..++..|+||| +|+++||+++ |+.||.... ............+.......++.+
T Consensus 160 ----~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 233 (261)
T cd05148 160 ----LSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMN--NHEVYDQITAGYRMPCPAKCPQEI 233 (261)
T ss_pred ----cccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCC--HHHHHHHHHhCCcCCCCCCCCHHH
Confidence 111334677899999 6999999998 899996532 122333333333333344555566
Q ss_pred cccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 743 LVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 743 ~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
...+.+||+.||++|||+.++++.|+.+
T Consensus 234 ~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 234 YKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred HHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 6677799999999999999999999864
No 122
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=99.97 E-value=4.8e-31 Score=280.59 Aligned_cols=229 Identities=22% Similarity=0.264 Sum_probs=171.7
Q ss_pred cccccccccccceEEEEEecCCCeEEEEEEeeccc-hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEE
Q 041479 524 LLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 524 ~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
.....+|+|.+|+||+|+.+.+++.||||++.... ......+.+|+.+++.++||||+++++++.+.+ ..++||
T Consensus 8 ~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-----~~~lv~ 82 (303)
T cd07869 8 EKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKE-----TLTLVF 82 (303)
T ss_pred eEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCC-----eEEEEE
Confidence 34456899999999999999888899999996543 223456789999999999999999999988766 789999
Q ss_pred EeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccC
Q 041479 603 EFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMS 678 (771)
Q Consensus 603 e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 678 (771)
||++ +++.++ ...+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++......
T Consensus 83 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~- 157 (303)
T cd07869 83 EYVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLLISDTGELKLADFGLARAKSVPS- 157 (303)
T ss_pred ECCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECCCCcceeccCCC-
Confidence 9996 465433 34578889999999999999999986 89999999999999999999999999987543211
Q ss_pred Ccccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHh-hCC----------
Q 041479 679 SNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKM-ALP---------- 731 (771)
Q Consensus 679 ~~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~-~~~---------- 731 (771)
.......||+.|+||| +||++|||++|+.||.+.......+...... ..+
T Consensus 158 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (303)
T cd07869 158 ---HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHS 234 (303)
T ss_pred ---ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhh
Confidence 1122346899999999 6999999999999997542211111111110 000
Q ss_pred --------------Cchhhh-----cCccccccCcccChhchhhcCCHHHHHH
Q 041479 732 --------------DQILQV-----LDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 732 --------------~~~~~~-----~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
...... ..+.......+|++.||++|||+.|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 235 LPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred ccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 000000 1112223455999999999999999985
No 123
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.97 E-value=6.2e-31 Score=281.56 Aligned_cols=223 Identities=22% Similarity=0.206 Sum_probs=175.9
Q ss_pred cccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhcc-CCCCceeEEEEeecCCCCCceeEEEEEE
Q 041479 528 SYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNI-RHRNLVKIITACSTSDFQGNYFRALVYE 603 (771)
Q Consensus 528 ~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~~~~lv~e 603 (771)
.+|+|.+|+||+|+++.+++.||||++.... ......+.+|++++..+ +||||+++++++.+.+ ..|+|||
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~-----~~~lv~e 76 (318)
T cd05570 2 VLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKD-----RLFFVME 76 (318)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCC-----EEEEEEc
Confidence 3799999999999999988899999997542 33456778899999888 6999999999988766 7899999
Q ss_pred eccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCc
Q 041479 604 FMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSN 680 (771)
Q Consensus 604 ~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 680 (771)
|+++|+|... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 77 ~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~--- 150 (318)
T cd05570 77 YVNGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGG--- 150 (318)
T ss_pred CCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHeEECCCCcEEecccCCCeecCcCC---
Confidence 9999999655 34689999999999999999999985 99999999999999999999999999987432211
Q ss_pred ccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCcccccc
Q 041479 681 QCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFLVG 745 (771)
Q Consensus 681 ~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 745 (771)
......+||+.|+||| +||++|||++|+.||.+... .......... ....+..++..+...
T Consensus 151 -~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~--~~~~~~i~~~-~~~~~~~~~~~~~~l 226 (318)
T cd05570 151 -VTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDE--DELFQSILED-EVRYPRWLSKEAKSI 226 (318)
T ss_pred -CcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCH--HHHHHHHHcC-CCCCCCcCCHHHHHH
Confidence 1122346899999999 69999999999999965321 1121211111 112233445556666
Q ss_pred CcccChhchhhcCCH-----HHHHH
Q 041479 746 GVQEGEETAEENIKK-----GQIRE 765 (771)
Q Consensus 746 ~~~cl~~~p~~Rpt~-----~~vl~ 765 (771)
..+||+.||++|||+ .++++
T Consensus 227 i~~~l~~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 227 LKSFLTKNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred HHHHccCCHHHcCCCCCCCHHHHhc
Confidence 779999999999999 77764
No 124
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.97 E-value=9.5e-31 Score=278.07 Aligned_cols=238 Identities=22% Similarity=0.257 Sum_probs=186.1
Q ss_pred ccccccccccccceEEEEEe-----cCCCeEEEEEEeeccc-hhhHHHHHHHHHHHhcc-CCCCceeEEEEeecCCCCCc
Q 041479 523 LLLNVSYESLVKATVYKGIL-----DLDQTFIAVKVLFLHQ-RGALKSFMAECQALRNI-RHRNLVKIITACSTSDFQGN 595 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~-----~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~ 595 (771)
+.....+|+|.+|.||+|.. ...+..||||+++... ....+.+.+|+++++++ +||||+++++++...+
T Consensus 37 ~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~---- 112 (302)
T cd05055 37 LSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGG---- 112 (302)
T ss_pred eEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCC----
Confidence 33445679999999999975 3345689999986543 34457899999999999 7999999999987766
Q ss_pred eeEEEEEEeccCCCCCCCc-----ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCc
Q 041479 596 YFRALVYEFMHHGSLESCP-----RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLT 670 (771)
Q Consensus 596 ~~~~lv~e~~~~g~L~~~~-----~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla 670 (771)
..|+||||+++|+|.++. ..+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+|++|||++
T Consensus 113 -~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~dfg~~ 188 (302)
T cd05055 113 -PILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLTHGKIVKICDFGLA 188 (302)
T ss_pred -ceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEEcCCCeEEECCCccc
Confidence 679999999999997652 2378999999999999999999985 8999999999999999999999999999
Q ss_pred cccCcccCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCch
Q 041479 671 RFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQI 734 (771)
Q Consensus 671 ~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~ 734 (771)
+........ .......++..|+||| +||++||+++ |..||.+.... ..+.+......+...
T Consensus 189 ~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~-~~~~~~~~~~~~~~~ 265 (302)
T cd05055 189 RDIMNDSNY--VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVD-SKFYKLIKEGYRMAQ 265 (302)
T ss_pred ccccCCCce--eecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCch-HHHHHHHHcCCcCCC
Confidence 865432211 1112234678899999 6999999998 99998764322 223344443333333
Q ss_pred hhhcCccccccCcccChhchhhcCCHHHHHHHHHHhC
Q 041479 735 LQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAIL 771 (771)
Q Consensus 735 ~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~l 771 (771)
+...++.+.....+|+.++|++|||+.|+++.|++++
T Consensus 266 ~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~~ 302 (302)
T cd05055 266 PEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQL 302 (302)
T ss_pred CCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhhC
Confidence 3445666667777999999999999999999999874
No 125
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.97 E-value=1.1e-30 Score=274.48 Aligned_cols=233 Identities=22% Similarity=0.259 Sum_probs=181.8
Q ss_pred ccccccccccceEEEEEecCCCe----EEEEEEeecc-chhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEE
Q 041479 525 LNVSYESLVKATVYKGILDLDQT----FIAVKVLFLH-QRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRA 599 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~~~~----~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 599 (771)
..-.+|+|.+|+||+|++..+++ .||||++... .....+++.+|+.+++.++||||+++++++... ..+
T Consensus 11 ~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~------~~~ 84 (279)
T cd05109 11 KVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTS------TVQ 84 (279)
T ss_pred eeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC------CcE
Confidence 34558999999999999876654 4899998644 334467899999999999999999999998654 357
Q ss_pred EEEEeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCc
Q 041479 600 LVYEFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPE 675 (771)
Q Consensus 600 lv~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~ 675 (771)
++|||+++|+|.++ ...+++.++..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++....
T Consensus 85 l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~ 161 (279)
T cd05109 85 LVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVLVKSPNHVKITDFGLARLLDI 161 (279)
T ss_pred EEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCCcEEECCCCceeeccc
Confidence 99999999999766 23578999999999999999999985 899999999999999999999999999986643
Q ss_pred ccCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhhhcC
Q 041479 676 VMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQVLD 739 (771)
Q Consensus 676 ~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 739 (771)
.... ....+..+++.|+||| |||++||+++ |..||..... ..+..+.....+...+...+
T Consensus 162 ~~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~ 237 (279)
T cd05109 162 DETE--YHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPA--REIPDLLEKGERLPQPPICT 237 (279)
T ss_pred ccce--eecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHHHCCCcCCCCccCC
Confidence 2211 1112233567899999 7999999998 9999865322 22334444333333333445
Q ss_pred ccccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 740 PLFLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 740 ~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
..+.....+||..||++||++.++++.|+++
T Consensus 238 ~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~ 268 (279)
T cd05109 238 IDVYMIMVKCWMIDSECRPRFRELVDEFSRM 268 (279)
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHHh
Confidence 5555667799999999999999999998875
No 126
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=99.97 E-value=7.1e-31 Score=296.08 Aligned_cols=238 Identities=22% Similarity=0.225 Sum_probs=183.6
Q ss_pred cccccccccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCC---CCce
Q 041479 522 DLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDF---QGNY 596 (771)
Q Consensus 522 ~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~---~~~~ 596 (771)
.+.....+|+|.+|+||+|+...+++.||||++.... ......+.+|+.++..++|+||+++++.+...+. ....
T Consensus 33 rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~~ 112 (496)
T PTZ00283 33 KYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPENVL 112 (496)
T ss_pred CEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcccce
Confidence 3444566899999999999999888999999996542 3455678999999999999999999887654331 1112
Q ss_pred eEEEEEEeccCCCCCCC-------cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccC
Q 041479 597 FRALVYEFMHHGSLESC-------PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGL 669 (771)
Q Consensus 597 ~~~lv~e~~~~g~L~~~-------~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl 669 (771)
..++||||+++|+|.++ ...+++..+..++.|++.||+|+|+. +|+||||||+||+++.++.+||+|||+
T Consensus 113 ~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NILl~~~~~vkL~DFGl 189 (496)
T PTZ00283 113 MIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANILLCSNGLVKLGDFGF 189 (496)
T ss_pred EEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEeCCCCEEEEeccc
Confidence 46899999999999764 23578889999999999999999985 999999999999999999999999999
Q ss_pred ccccCcccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCch
Q 041479 670 TRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQI 734 (771)
Q Consensus 670 a~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~ 734 (771)
++........ ......+||+.|+||| |||++|||++|+.||.+.... .+............
T Consensus 190 s~~~~~~~~~--~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~--~~~~~~~~~~~~~~ 265 (496)
T PTZ00283 190 SKMYAATVSD--DVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENME--EVMHKTLAGRYDPL 265 (496)
T ss_pred Ceeccccccc--cccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHH--HHHHHHhcCCCCCC
Confidence 9865433221 1123457999999999 699999999999999653111 11111111112233
Q ss_pred hhhcCccccccCcccChhchhhcCCHHHHHHH
Q 041479 735 LQVLDPLFLVGGVQEGEETAEENIKKGQIRES 766 (771)
Q Consensus 735 ~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~ 766 (771)
+..+++.+.....+||+.||++||++.++++.
T Consensus 266 ~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 266 PPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred CCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 44556666677779999999999999999763
No 127
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.97 E-value=8.4e-31 Score=276.91 Aligned_cols=234 Identities=24% Similarity=0.290 Sum_probs=183.3
Q ss_pred cccccccccceEEEEEecC-----CCeEEEEEEeeccc-hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEE
Q 041479 526 NVSYESLVKATVYKGILDL-----DQTFIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRA 599 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~-----~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 599 (771)
...+|+|.+|+||+|+... +...||+|.+.... ....+++.+|+.+++.++||||+++++++...+ ..+
T Consensus 5 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~~ 79 (290)
T cd05045 5 GKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDG-----PLL 79 (290)
T ss_pred cccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCC-----CcE
Confidence 3457999999999998753 23579999886543 334578999999999999999999999987766 579
Q ss_pred EEEEeccCCCCCCCc---------------------------ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCC
Q 041479 600 LVYEFMHHGSLESCP---------------------------RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPS 652 (771)
Q Consensus 600 lv~e~~~~g~L~~~~---------------------------~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~ 652 (771)
+||||+.+|+|.++. ..+++..+..++.|++.||+|||+. +|+||||||+
T Consensus 80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~ivH~dikp~ 156 (290)
T cd05045 80 LIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM---KLVHRDLAAR 156 (290)
T ss_pred EEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC---Ceehhhhhhh
Confidence 999999999986541 2467888999999999999999985 8999999999
Q ss_pred CeeeCCCCceEEecccCccccCcccCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccc
Q 041479 653 NVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMF 716 (771)
Q Consensus 653 NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~ 716 (771)
||++++++.+||+|||+++........ .......++..|+||| ||+++|||++ |..||.+..
T Consensus 157 nill~~~~~~kl~dfg~~~~~~~~~~~--~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~ 234 (290)
T cd05045 157 NVLVAEGRKMKISDFGLSRDVYEEDSY--VKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIA 234 (290)
T ss_pred eEEEcCCCcEEeccccccccccCccch--hcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCC
Confidence 999999999999999999865432221 1122234577899999 6999999999 999986532
Q ss_pred cCCccHHHHHHhhCCCchhhhcCccccccCcccChhchhhcCCHHHHHHHHHHhC
Q 041479 717 TEGLDLHNFVKMALPDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAIL 771 (771)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~l 771 (771)
...+.+..........+...+..+...+.+|++.+|++||++.++++.|++++
T Consensus 235 --~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~ 287 (290)
T cd05045 235 --PERLFNLLKTGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMM 287 (290)
T ss_pred --HHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHH
Confidence 22344444443333334445556666777999999999999999999999874
No 128
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.97 E-value=1.5e-30 Score=274.21 Aligned_cols=238 Identities=22% Similarity=0.250 Sum_probs=178.9
Q ss_pred cccccccccceEEEEEec----CCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEE
Q 041479 526 NVSYESLVKATVYKGILD----LDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALV 601 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~----~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv 601 (771)
...+|+|.+|+||+|..+ .+++.||||++........+.+.+|++++++++||||+++++++...+. ...++|
T Consensus 9 ~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~---~~~~lv 85 (284)
T cd05081 9 IQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR---RNLRLV 85 (284)
T ss_pred eeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCC---CceEEE
Confidence 345899999999999853 4567999999976666667789999999999999999999998765432 257899
Q ss_pred EEeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCccc
Q 041479 602 YEFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVM 677 (771)
Q Consensus 602 ~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~ 677 (771)
|||+++|+|.++ ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 86 ~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~ 162 (284)
T cd05081 86 MEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVESENRVKIGDFGLTKVLPQDK 162 (284)
T ss_pred EEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEECCCCeEEECCCcccccccCCC
Confidence 999999999876 23578999999999999999999985 99999999999999999999999999998765432
Q ss_pred CCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccC-------C----c---cHHHHHHh
Q 041479 678 SSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTE-------G----L---DLHNFVKM 728 (771)
Q Consensus 678 ~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~-------~----~---~~~~~~~~ 728 (771)
..... .....++..|+||| +||++||+++|..|+...... . . .+.++...
T Consensus 163 ~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (284)
T cd05081 163 EYYKV-REPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKN 241 (284)
T ss_pred cceee-cCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHhc
Confidence 21111 11122455699999 699999999987765322100 0 0 01112222
Q ss_pred hCCCchhhhcCccccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 729 ALPDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 729 ~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
.........++..+.....+||..+|++||||.|+++.|+++
T Consensus 242 ~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 242 NGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred CCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 222122233344555667799999999999999999999875
No 129
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=99.97 E-value=9.2e-31 Score=271.30 Aligned_cols=228 Identities=23% Similarity=0.299 Sum_probs=178.8
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEec
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFM 605 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~~ 605 (771)
...+|+|.+|+||+|.+..+. .||||.+.... ...++|.+|+.++++++||||+++++++.+.+ ..++||||+
T Consensus 9 ~~~lg~G~~~~vy~~~~~~~~-~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~lv~e~~ 81 (256)
T cd05113 9 LKELGTGQFGVVKYGKWRGQY-DVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQR-----PIYIVTEYM 81 (256)
T ss_pred eeEecCcccceEEEEEecCCC-cEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCC-----CcEEEEEcC
Confidence 446899999999999887554 79999986433 23467999999999999999999999987665 579999999
Q ss_pred cCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCcc
Q 041479 606 HHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQ 681 (771)
Q Consensus 606 ~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 681 (771)
++|+|.++ ...+++.++..++.|++.|++|||+. +++||||||+||+++.++.+||+|||.++.......
T Consensus 82 ~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~--- 155 (256)
T cd05113 82 SNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEY--- 155 (256)
T ss_pred CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCCEEECCCccceecCCCce---
Confidence 99998765 23578999999999999999999985 999999999999999999999999999876543221
Q ss_pred cccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhhhcCcccccc
Q 041479 682 CSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFLVG 745 (771)
Q Consensus 682 ~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 745 (771)
....+..++..|+||| |||++|||++ |+.||..... ....+......+.......+..+...
T Consensus 156 ~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l 233 (256)
T cd05113 156 TSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNN--SETVEKVSQGLRLYRPHLASEKVYAI 233 (256)
T ss_pred eecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCH--HHHHHHHhcCCCCCCCCCCCHHHHHH
Confidence 1122334667899999 6999999999 9999865321 12223333333333333445556667
Q ss_pred CcccChhchhhcCCHHHHHHHHH
Q 041479 746 GVQEGEETAEENIKKGQIRESLI 768 (771)
Q Consensus 746 ~~~cl~~~p~~Rpt~~~vl~~L~ 768 (771)
..+||+.+|++|||+.++++.|+
T Consensus 234 i~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 234 MYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred HHHHcCCCcccCCCHHHHHHhhC
Confidence 77999999999999999998764
No 130
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.97 E-value=1.7e-30 Score=269.54 Aligned_cols=231 Identities=22% Similarity=0.277 Sum_probs=182.7
Q ss_pred cccccccceEEEEEecCCC---eEEEEEEeeccch-hhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEE
Q 041479 528 SYESLVKATVYKGILDLDQ---TFIAVKVLFLHQR-GALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYE 603 (771)
Q Consensus 528 ~l~~~~~~~Vy~~~~~~~~---~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e 603 (771)
.+|+|.+|.||+|++...+ ..||+|.+..... ...+++.+|+++++++.|||||++++++... ..++|||
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~------~~~~v~e 75 (257)
T cd05060 2 ELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKGE------PLMLVME 75 (257)
T ss_pred ccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcCC------ceEEEEE
Confidence 3689999999999876554 6899999965543 3456899999999999999999999987533 4689999
Q ss_pred eccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCc
Q 041479 604 FMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSN 680 (771)
Q Consensus 604 ~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 680 (771)
|+++|+|.++ ...+++..+..++.|++.|++|||+. +++||||||+||+++.++.+|++|||+++........
T Consensus 76 ~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~- 151 (257)
T cd05060 76 LAPLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDY- 151 (257)
T ss_pred eCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEEEcCCCcEEeccccccceeecCCcc-
Confidence 9999999876 23588999999999999999999985 8999999999999999999999999999866433221
Q ss_pred ccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhhhcCccccc
Q 041479 681 QCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFLV 744 (771)
Q Consensus 681 ~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 744 (771)
........++..|+||| |||++||+++ |+.||.+.. +..+.+......+...+..+++.+..
T Consensus 152 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~ 229 (257)
T cd05060 152 YRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMK--GAEVIAMLESGERLPRPEECPQEIYS 229 (257)
T ss_pred cccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCC--HHHHHHHHHcCCcCCCCCCCCHHHHH
Confidence 11112223457899999 6999999998 999997542 23344444444333344445566667
Q ss_pred cCcccChhchhhcCCHHHHHHHHHHh
Q 041479 745 GGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 745 ~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
.+.+||..+|++|||+.++++.|+++
T Consensus 230 li~~cl~~~p~~Rp~~~~l~~~l~~~ 255 (257)
T cd05060 230 IMLSCWKYRPEDRPTFSELESTFRRD 255 (257)
T ss_pred HHHHHhcCChhhCcCHHHHHHHHHhc
Confidence 77799999999999999999999874
No 131
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.97 E-value=1.3e-30 Score=274.33 Aligned_cols=227 Identities=22% Similarity=0.247 Sum_probs=181.8
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEec
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFM 605 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~~ 605 (771)
...+|+|.+|.||+|.+..++..||+|.+........+.+.+|+++++.++||||+++++++...+ ..|+||||+
T Consensus 10 ~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~-----~~~~v~e~~ 84 (282)
T cd06643 10 IGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYEN-----NLWILIEFC 84 (282)
T ss_pred HhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCC-----EEEEEEEec
Confidence 345899999999999999988899999997666666788999999999999999999999988766 789999999
Q ss_pred cCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCcc
Q 041479 606 HHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQ 681 (771)
Q Consensus 606 ~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 681 (771)
++|+|..+ ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+|++|||+++......
T Consensus 85 ~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~---- 157 (282)
T cd06643 85 AGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI---- 157 (282)
T ss_pred CCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEccCCCEEEccccccccccccc----
Confidence 99998664 34688999999999999999999985 99999999999999999999999999987543221
Q ss_pred cccccccccccccchh--------------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCC-CchhhhcCc
Q 041479 682 CSSVGLKGTVGYATPE--------------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALP-DQILQVLDP 740 (771)
Q Consensus 682 ~~~~~~~gt~~y~aPE--------------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 740 (771)
.......|++.|+||| +||++|||++|+.||.+..... ..........+ ...+..++.
T Consensus 158 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 236 (282)
T cd06643 158 QRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMR-VLLKIAKSEPPTLAQPSRWSS 236 (282)
T ss_pred cccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHH-HHHHHhhcCCCCCCCccccCH
Confidence 1122346899999999 6999999999999986532211 12222222111 122233455
Q ss_pred cccccCcccChhchhhcCCHHHHHH
Q 041479 741 LFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 741 ~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
.+.....+||+.||++|||+.++++
T Consensus 237 ~~~~li~~~l~~~p~~Rp~~~~il~ 261 (282)
T cd06643 237 EFKDFLKKCLEKNVDARWTTTQLLQ 261 (282)
T ss_pred HHHHHHHHHccCChhhCcCHHHHhc
Confidence 5666777999999999999999875
No 132
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.97 E-value=1.7e-30 Score=271.39 Aligned_cols=237 Identities=24% Similarity=0.375 Sum_probs=182.9
Q ss_pred ccccccccccceEEEEEecCCCe---EEEEEEeecc-chhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEE
Q 041479 525 LNVSYESLVKATVYKGILDLDQT---FIAVKVLFLH-QRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRAL 600 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~~~~---~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~l 600 (771)
....+|+|.+|.||+|+++.+++ .||||++... .....++|..|+.++++++||||+++++++.+.. ..++
T Consensus 8 ~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~-----~~~l 82 (269)
T cd05065 8 IEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSR-----PVMI 82 (269)
T ss_pred EEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCC-----ceEE
Confidence 34558999999999999876653 6999998654 3445678999999999999999999999987665 6799
Q ss_pred EEEeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcc
Q 041479 601 VYEFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676 (771)
Q Consensus 601 v~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~ 676 (771)
||||+++|+|.++ ...+++.++..++.|++.|++|||+. +++||||||+||+++.++.+|++|||+++.....
T Consensus 83 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~ 159 (269)
T cd05065 83 ITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDD 159 (269)
T ss_pred EEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEEEcCCCcEEECCCccccccccC
Confidence 9999999999765 33578899999999999999999985 9999999999999999999999999998865432
Q ss_pred cCCcc-cccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhhhcC
Q 041479 677 MSSNQ-CSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQVLD 739 (771)
Q Consensus 677 ~~~~~-~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 739 (771)
..... ....+..++..|+||| +||++||+++ |..||.+... ....++.....+......++
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~--~~~~~~i~~~~~~~~~~~~~ 237 (269)
T cd05065 160 TSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN--QDVINAIEQDYRLPPPMDCP 237 (269)
T ss_pred ccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCH--HHHHHHHHcCCcCCCcccCC
Confidence 21111 1111112245799999 6999999987 9999965321 22334443333322223334
Q ss_pred ccccccCcccChhchhhcCCHHHHHHHHHHhC
Q 041479 740 PLFLVGGVQEGEETAEENIKKGQIRESLIAIL 771 (771)
Q Consensus 740 ~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~l 771 (771)
..+.....+||..+|++||++.+++..|++++
T Consensus 238 ~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~ 269 (269)
T cd05065 238 TALHQLMLDCWQKDRNARPKFGQIVSTLDKMI 269 (269)
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHhhC
Confidence 45555667999999999999999999999874
No 133
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=99.97 E-value=1.1e-30 Score=275.39 Aligned_cols=225 Identities=24% Similarity=0.248 Sum_probs=177.3
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEE
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYE 603 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e 603 (771)
-.+|+|.+|+||++....+++.||||++.... ......+.+|+.++++++||||+++++++.+.+ ..++|||
T Consensus 6 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~~lv~e 80 (285)
T cd05605 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKD-----ALCLVLT 80 (285)
T ss_pred EEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCC-----eEEEEEe
Confidence 35799999999999998888899999996542 223456788999999999999999999987766 6899999
Q ss_pred eccCCCCCCC-----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccC
Q 041479 604 FMHHGSLESC-----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMS 678 (771)
Q Consensus 604 ~~~~g~L~~~-----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 678 (771)
|+++|+|... ...+++..+..++.|++.|++|||+. +|+||||||+||++++++.++|+|||+++.......
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 157 (285)
T cd05605 81 LMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGET 157 (285)
T ss_pred ccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEEECCCCCEEEeeCCCceecCCCCc
Confidence 9999999654 23588999999999999999999985 899999999999999999999999999986543221
Q ss_pred Ccccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHH--hhCCCchhhhcCcc
Q 041479 679 SNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVK--MALPDQILQVLDPL 741 (771)
Q Consensus 679 ~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 741 (771)
.....|++.|+||| +||++||+++|+.||.+.... ....++.. ...+...+..+++.
T Consensus 158 -----~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 231 (285)
T cd05605 158 -----IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEK-VKREEVERRVKEDQEEYSEKFSEA 231 (285)
T ss_pred -----cccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchh-hHHHHHHHHhhhcccccCcccCHH
Confidence 12346899999999 699999999999999753211 11111111 11122333445566
Q ss_pred ccccCcccChhchhhcC-----CHHHHHH
Q 041479 742 FLVGGVQEGEETAEENI-----KKGQIRE 765 (771)
Q Consensus 742 ~~~~~~~cl~~~p~~Rp-----t~~~vl~ 765 (771)
+.....+||+.||++|| +++++++
T Consensus 232 ~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05605 232 ARSICRQLLTKDPGFRLGCRGEGAEEVKA 260 (285)
T ss_pred HHHHHHHHccCCHHHhcCCCCCCHHHHhc
Confidence 66677799999999999 7888864
No 134
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.97 E-value=6.9e-31 Score=281.93 Aligned_cols=219 Identities=27% Similarity=0.261 Sum_probs=169.4
Q ss_pred cccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHH-HHhccCCCCceeEEEEeecCCCCCceeEEEEEE
Q 041479 528 SYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQ-ALRNIRHRNLVKIITACSTSDFQGNYFRALVYE 603 (771)
Q Consensus 528 ~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~-~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e 603 (771)
.+|+|.+|+||+|+++.+++.||||++.... ....+++..|.. +++.++||||+++++++.+.+ ..|+|||
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~-----~~~lv~e 76 (323)
T cd05575 2 VIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTAD-----KLYFVLD 76 (323)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCC-----EEEEEEc
Confidence 3789999999999999999999999996542 223345566655 467899999999999987766 7899999
Q ss_pred eccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCc
Q 041479 604 FMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSN 680 (771)
Q Consensus 604 ~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 680 (771)
|+++|+|..+ ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 77 ~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~--- 150 (323)
T cd05575 77 YVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHS--- 150 (323)
T ss_pred CCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeccCCCcccccCC---
Confidence 9999999655 34678888999999999999999985 99999999999999999999999999987532211
Q ss_pred ccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCcccccc
Q 041479 681 QCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFLVG 745 (771)
Q Consensus 681 ~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 745 (771)
......+||+.|+||| +||++|||++|+.||.+.... ......... +......+++.+...
T Consensus 151 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~-~~~~~i~~~--~~~~~~~~~~~~~~l 226 (323)
T cd05575 151 -KTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTA-EMYDNILNK--PLRLKPNISVSARHL 226 (323)
T ss_pred -CccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHH-HHHHHHHcC--CCCCCCCCCHHHHHH
Confidence 1122456999999999 699999999999999653111 111111111 222333445556666
Q ss_pred CcccChhchhhcCCHH
Q 041479 746 GVQEGEETAEENIKKG 761 (771)
Q Consensus 746 ~~~cl~~~p~~Rpt~~ 761 (771)
..+|++.||++||+++
T Consensus 227 i~~~l~~~p~~R~~~~ 242 (323)
T cd05575 227 LEGLLQKDRTKRLGAK 242 (323)
T ss_pred HHHHhhcCHHhCCCCC
Confidence 7799999999999985
No 135
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.97 E-value=1.3e-30 Score=280.01 Aligned_cols=221 Identities=22% Similarity=0.232 Sum_probs=174.1
Q ss_pred cccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhcc-CCCCceeEEEEeecCCCCCceeEEEEEE
Q 041479 528 SYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNI-RHRNLVKIITACSTSDFQGNYFRALVYE 603 (771)
Q Consensus 528 ~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~~~~lv~e 603 (771)
.+|+|.+|+||+|+.+.+++.||||++.... ....+.+.+|+.++.++ +||||+++++++.+.+ ..|+|||
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~-----~~~lv~e 76 (327)
T cd05617 2 VIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTS-----RLFLVIE 76 (327)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCC-----EEEEEEe
Confidence 4799999999999999999999999997542 23456788999999888 6999999999987766 7899999
Q ss_pred eccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCc
Q 041479 604 FMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSN 680 (771)
Q Consensus 604 ~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 680 (771)
|+++|+|... .+.+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 77 ~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~--- 150 (327)
T cd05617 77 YVNGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPG--- 150 (327)
T ss_pred CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEeCCCCEEEeccccceeccCCC---
Confidence 9999999654 35689999999999999999999985 99999999999999999999999999987432211
Q ss_pred ccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccC-CccHHHHH---HhhCCCchhhhcCcc
Q 041479 681 QCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTE-GLDLHNFV---KMALPDQILQVLDPL 741 (771)
Q Consensus 681 ~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~ 741 (771)
......+||+.|+||| +||++|||++|+.||...... .....++. ....+...+..++..
T Consensus 151 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 229 (327)
T cd05617 151 -DTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRIPRFLSVK 229 (327)
T ss_pred -CceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCCCCCCCCHH
Confidence 1122356999999999 699999999999999642211 11111111 112223344555666
Q ss_pred ccccCcccChhchhhcCCH
Q 041479 742 FLVGGVQEGEETAEENIKK 760 (771)
Q Consensus 742 ~~~~~~~cl~~~p~~Rpt~ 760 (771)
......+|++.||++||++
T Consensus 230 ~~~li~~~L~~dP~~R~~~ 248 (327)
T cd05617 230 ASHVLKGFLNKDPKERLGC 248 (327)
T ss_pred HHHHHHHHhccCHHHcCCC
Confidence 6666779999999999985
No 136
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.97 E-value=1.4e-31 Score=281.85 Aligned_cols=229 Identities=19% Similarity=0.199 Sum_probs=189.5
Q ss_pred ccccccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEE
Q 041479 525 LNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
..-.+|.|+||.++..+++.+.+.||+|.+.... ...++....|+.++++++|||||.+.+.|++.+. +.+|||
T Consensus 8 ~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~----~l~Ivm 83 (426)
T KOG0589|consen 8 VLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQ----LLCIVM 83 (426)
T ss_pred hhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCc----eEEEEE
Confidence 3445799999999999999999999999997664 3345578999999999999999999999988762 489999
Q ss_pred EeccCCCCCCC-----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCccc
Q 041479 603 EFMHHGSLESC-----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVM 677 (771)
Q Consensus 603 e~~~~g~L~~~-----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~ 677 (771)
+||+||++.+. ...+++..+..++.|++.|+.|||+. +|+|||||+.||++..++.+|+.|||+|+.+....
T Consensus 84 ~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~ 160 (426)
T KOG0589|consen 84 EYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPED 160 (426)
T ss_pred eecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhhhhhccccCceeecchhhhhhcCCch
Confidence 99999999776 34688999999999999999999975 89999999999999999999999999999887643
Q ss_pred CCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCccc
Q 041479 678 SSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLF 742 (771)
Q Consensus 678 ~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 742 (771)
. ...+.+||+.||+|| +||++|||++-+.+|...-..+ -..++.... -..++......+
T Consensus 161 ~----~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~-Li~ki~~~~-~~Plp~~ys~el 234 (426)
T KOG0589|consen 161 S----LASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSE-LILKINRGL-YSPLPSMYSSEL 234 (426)
T ss_pred h----hhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHH-HHHHHhhcc-CCCCCccccHHH
Confidence 2 233468999999999 6999999999999997532222 122222222 345666777777
Q ss_pred cccCcccChhchhhcCCHHHHHHH
Q 041479 743 LVGGVQEGEETAEENIKKGQIRES 766 (771)
Q Consensus 743 ~~~~~~cl~~~p~~Rpt~~~vl~~ 766 (771)
+.+...|+.++|..||++.+++.+
T Consensus 235 ~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 235 RSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred HHHHHHHhhcCCccCCCHHHHhhC
Confidence 777889999999999999999865
No 137
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.97 E-value=1.4e-30 Score=271.83 Aligned_cols=228 Identities=21% Similarity=0.254 Sum_probs=179.6
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEec
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFM 605 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~~ 605 (771)
...+|+|.+|+||+|+++.+++.||+|.+........+.+.+|+.++++++|+||+++++++...+ ..++||||+
T Consensus 13 ~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-----~~~lv~e~~ 87 (268)
T cd06624 13 RVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENG-----FFKIFMEQV 87 (268)
T ss_pred eEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCC-----EEEEEEecC
Confidence 456899999999999999888899999987666666778999999999999999999999988776 789999999
Q ss_pred cCCCCCCCc----ccC--CHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCC-CCceEEecccCccccCcccC
Q 041479 606 HHGSLESCP----RIL--SFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN-DMTAHMGDFGLTRFIPEVMS 678 (771)
Q Consensus 606 ~~g~L~~~~----~~l--~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~-~~~~kl~DfGla~~~~~~~~ 678 (771)
++++|.++. ..+ ++..+..++.|++.|++|||+. +|+||||||+||+++. ++.+||+|||++........
T Consensus 88 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~ 164 (268)
T cd06624 88 PGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINP 164 (268)
T ss_pred CCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCeEEEecchhheecccCCC
Confidence 999997762 234 7778889999999999999985 9999999999999976 67999999999876533221
Q ss_pred Ccccccccccccccccchh-----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCcc
Q 041479 679 SNQCSSVGLKGTVGYATPE-----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPL 741 (771)
Q Consensus 679 ~~~~~~~~~~gt~~y~aPE-----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 741 (771)
......|++.|+||| +|+++||+++|+.||.....................++..+++.
T Consensus 165 ----~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (268)
T cd06624 165 ----CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHPEIPESLSAE 240 (268)
T ss_pred ----ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhccCCCCCcccCHH
Confidence 111235789999999 69999999999999865322111111111111223344455556
Q ss_pred ccccCcccChhchhhcCCHHHHHH
Q 041479 742 FLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 742 ~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
+.....+||..+|++|||+.|+++
T Consensus 241 ~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 241 AKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred HHHHHHHHcCCCchhCCCHHHHHh
Confidence 666677999999999999999985
No 138
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.97 E-value=1.1e-30 Score=274.97 Aligned_cols=232 Identities=19% Similarity=0.233 Sum_probs=178.8
Q ss_pred cccccccccceEEEEEecCC-----CeEEEEEEeeccc-hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEE
Q 041479 526 NVSYESLVKATVYKGILDLD-----QTFIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRA 599 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~-----~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 599 (771)
...+|+|.+|+||+|.+..+ ++.||||++.... ....+.+.+|+.++++++|||||++++++.+.+ ..+
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~-----~~~ 84 (283)
T cd05091 10 MEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQ-----PLS 84 (283)
T ss_pred HHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCC-----ceE
Confidence 34579999999999987543 4689999996543 233567899999999999999999999988776 678
Q ss_pred EEEEeccCCCCCCCc-------------------ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCC
Q 041479 600 LVYEFMHHGSLESCP-------------------RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDM 660 (771)
Q Consensus 600 lv~e~~~~g~L~~~~-------------------~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~ 660 (771)
+++||+++++|.++. ..+++..+..++.|++.||+|+|+. +|+||||||+||++++++
T Consensus 85 ~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---gi~H~dlkp~Nil~~~~~ 161 (283)
T cd05091 85 MIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRNVLVFDKL 161 (283)
T ss_pred EEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---CccccccchhheEecCCC
Confidence 999999999876541 2477888999999999999999985 899999999999999999
Q ss_pred ceEEecccCccccCcccCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHH
Q 041479 661 TAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHN 724 (771)
Q Consensus 661 ~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~ 724 (771)
.+|++|||+++....... ........+++.|+||| +||++|||++ |..||.+... ..+.+
T Consensus 162 ~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~--~~~~~ 237 (283)
T cd05091 162 NVKISDLGLFREVYAADY--YKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN--QDVIE 237 (283)
T ss_pred ceEecccccccccccchh--eeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCH--HHHHH
Confidence 999999999886543321 11112234678899999 6999999998 8888865322 12333
Q ss_pred HHHhhCCCchhhhcCccccccCcccChhchhhcCCHHHHHHHHHH
Q 041479 725 FVKMALPDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIA 769 (771)
Q Consensus 725 ~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~ 769 (771)
..........+..+...+.....+||+.+|++||++.++++.|+.
T Consensus 238 ~i~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 238 MIRNRQVLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred HHHcCCcCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 332222222333344445566679999999999999999999874
No 139
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.97 E-value=1.3e-30 Score=273.64 Aligned_cols=233 Identities=21% Similarity=0.248 Sum_probs=177.1
Q ss_pred ccccccccccceEEEEEecC-----CCeEEEEEEeeccc-hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeE
Q 041479 525 LNVSYESLVKATVYKGILDL-----DQTFIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFR 598 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~-----~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 598 (771)
....+|+|++|.||+|+++. .+..||||++.... .....+|.+|+.+++.++||||+++++++.+.. ..
T Consensus 10 ~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~-----~~ 84 (277)
T cd05062 10 MSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ-----PT 84 (277)
T ss_pred eeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC-----Ce
Confidence 34568999999999998652 34689999985432 234567899999999999999999999987665 67
Q ss_pred EEEEEeccCCCCCCCc-------------ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEe
Q 041479 599 ALVYEFMHHGSLESCP-------------RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMG 665 (771)
Q Consensus 599 ~lv~e~~~~g~L~~~~-------------~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~ 665 (771)
++||||+++|+|.++. ..+++..+..++.|++.|++|||+. +++||||||+||++++++.+|++
T Consensus 85 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp~Nil~~~~~~~~l~ 161 (277)
T cd05062 85 LVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIG 161 (277)
T ss_pred EEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcchheEEEcCCCCEEEC
Confidence 9999999999997652 1246778899999999999999985 89999999999999999999999
Q ss_pred cccCccccCcccCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhh
Q 041479 666 DFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMA 729 (771)
Q Consensus 666 DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~ 729 (771)
|||+++........ .......+++.||||| |||++||+++ |..||.+... ....+.....
T Consensus 162 dfg~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~--~~~~~~~~~~ 237 (277)
T cd05062 162 DFGMTRDIYETDYY--RKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSN--EQVLRFVMEG 237 (277)
T ss_pred CCCCccccCCccee--ecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHHHcC
Confidence 99999755332211 1111234578899999 6999999999 7888865321 1222222222
Q ss_pred CCCchhhhcCccccccCcccChhchhhcCCHHHHHHHHHH
Q 041479 730 LPDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIA 769 (771)
Q Consensus 730 ~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~ 769 (771)
.....+......+.....+|++.||++|||+.|+++.|++
T Consensus 238 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~ 277 (277)
T cd05062 238 GLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKE 277 (277)
T ss_pred CcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhhC
Confidence 2222233344555667779999999999999999999874
No 140
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.97 E-value=1.9e-30 Score=270.82 Aligned_cols=236 Identities=19% Similarity=0.312 Sum_probs=182.3
Q ss_pred ccccccccccceEEEEEecCCCe---EEEEEEeeccc-hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEE
Q 041479 525 LNVSYESLVKATVYKGILDLDQT---FIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRAL 600 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~~~~---~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~l 600 (771)
....+|+|.+|.||+|+.+.+++ .||||.+.... ....+++..|++++++++||||+++++++...+ ..++
T Consensus 9 ~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~l 83 (268)
T cd05063 9 KQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFK-----PAMI 83 (268)
T ss_pred EeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCC-----CcEE
Confidence 34568999999999999876543 79999986542 344678999999999999999999999987766 6799
Q ss_pred EEEeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcc
Q 041479 601 VYEFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676 (771)
Q Consensus 601 v~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~ 676 (771)
||||+++++|.++ ...+++.++..++.|++.|++|||+. +++||||||+||+++.++.+|++|||++......
T Consensus 84 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~ 160 (268)
T cd05063 84 ITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNILVNSNLECKVSDFGLSRVLEDD 160 (268)
T ss_pred EEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEEcCCCcEEECCCccceecccc
Confidence 9999999999766 23578999999999999999999985 8999999999999999999999999999865432
Q ss_pred cCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhhhcCc
Q 041479 677 MSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQVLDP 740 (771)
Q Consensus 677 ~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 740 (771)
.... ........++.|+||| +||++||+++ |+.||..... ..+........+.......+.
T Consensus 161 ~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~--~~~~~~i~~~~~~~~~~~~~~ 237 (268)
T cd05063 161 PEGT-YTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSN--HEVMKAINDGFRLPAPMDCPS 237 (268)
T ss_pred cccc-eeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCH--HHHHHHHhcCCCCCCCCCCCH
Confidence 2111 1111222356799999 6999999998 9999965322 122222222222222223445
Q ss_pred cccccCcccChhchhhcCCHHHHHHHHHHhC
Q 041479 741 LFLVGGVQEGEETAEENIKKGQIRESLIAIL 771 (771)
Q Consensus 741 ~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~l 771 (771)
.+.....+||+.+|++||++.+|++.|++++
T Consensus 238 ~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~~ 268 (268)
T cd05063 238 AVYQLMLQCWQQDRARRPRFVDIVNLLDKLL 268 (268)
T ss_pred HHHHHHHHHcCCCcccCcCHHHHHHHHHhhC
Confidence 5556677999999999999999999999875
No 141
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.97 E-value=1.3e-30 Score=271.01 Aligned_cols=231 Identities=26% Similarity=0.345 Sum_probs=180.5
Q ss_pred ccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEe
Q 041479 525 LNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEF 604 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~ 604 (771)
....+|+|.+|.||+|.+..+ +.||||.++... ...+++.+|++++++++||||+++++++...+ ..++||||
T Consensus 10 ~~~~lg~g~~~~v~~~~~~~~-~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~lv~e~ 82 (261)
T cd05068 10 LLRKLGAGQFGEVWEGLWNNT-TPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEE-----PIYIVTEL 82 (261)
T ss_pred eEEEecccCCccEEEEEecCC-eEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCC-----Ceeeeeec
Confidence 345689999999999997655 589999986543 23567999999999999999999999987766 67999999
Q ss_pred ccCCCCCCCc-----ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCC
Q 041479 605 MHHGSLESCP-----RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSS 679 (771)
Q Consensus 605 ~~~g~L~~~~-----~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 679 (771)
+++++|.++. ..+++.++..++.|++.|+.|||+. +|+||||||+||++++++.+||+|||+++.......
T Consensus 83 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~- 158 (261)
T cd05068 83 MKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGENNICKVADFGLARVIKEDIY- 158 (261)
T ss_pred ccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEcCCCCEEECCcceEEEccCCcc-
Confidence 9999997662 3588999999999999999999985 899999999999999999999999999987653221
Q ss_pred cccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhhhcCcccc
Q 041479 680 NQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFL 743 (771)
Q Consensus 680 ~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 743 (771)
....+..++..|+||| ||+++||++| |+.||.+... ...........+.......+..+.
T Consensus 159 --~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 234 (261)
T cd05068 159 --EAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTN--AEVLQQVDQGYRMPCPPGCPKELY 234 (261)
T ss_pred --cccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCH--HHHHHHHHcCCCCCCCCcCCHHHH
Confidence 1112223356799999 6999999999 9999865321 112222222222222333445555
Q ss_pred ccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 744 VGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 744 ~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
....+|++.+|++||++.++++.|+++
T Consensus 235 ~li~~~l~~~P~~Rp~~~~l~~~l~~~ 261 (261)
T cd05068 235 DIMLDCWKEDPDDRPTFETLQWKLEDF 261 (261)
T ss_pred HHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence 667799999999999999999999874
No 142
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=99.97 E-value=9.7e-31 Score=276.44 Aligned_cols=230 Identities=22% Similarity=0.294 Sum_probs=170.0
Q ss_pred cccccccccceEEEEEec-CCCeEEEEEEeeccc--hhhHHHHHHHHHHHhcc---CCCCceeEEEEeecCCCCCceeEE
Q 041479 526 NVSYESLVKATVYKGILD-LDQTFIAVKVLFLHQ--RGALKSFMAECQALRNI---RHRNLVKIITACSTSDFQGNYFRA 599 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~-~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l---~H~nIv~l~~~~~~~~~~~~~~~~ 599 (771)
...+|+|.+|+||+|++. .+++.||||++.... ......+.+|+.+++.+ +||||++++++|...........+
T Consensus 6 ~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~~~~~ 85 (290)
T cd07862 6 VAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLT 85 (290)
T ss_pred eeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCCCcEE
Confidence 345899999999999985 456789999986542 23345677788877766 699999999998654333334679
Q ss_pred EEEEeccCCCCCCC-----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccC
Q 041479 600 LVYEFMHHGSLESC-----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIP 674 (771)
Q Consensus 600 lv~e~~~~g~L~~~-----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~ 674 (771)
+||||++ ++|.++ ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 86 lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 161 (290)
T cd07862 86 LVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYS 161 (290)
T ss_pred EEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEcCCCCEEEccccceEecc
Confidence 9999996 577554 23478899999999999999999985 99999999999999999999999999997654
Q ss_pred cccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhh-CC--C----
Q 041479 675 EVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMA-LP--D---- 732 (771)
Q Consensus 675 ~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~-~~--~---- 732 (771)
... ......||+.|+||| +||++|||++|+.||.+....+ .+....... .+ .
T Consensus 162 ~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~-~~~~i~~~~~~~~~~~~~~ 235 (290)
T cd07862 162 FQM-----ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD-QLGKILDVIGLPGEEDWPR 235 (290)
T ss_pred CCc-----ccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHH-HHHHHHHHhCCCChhhchh
Confidence 321 122346899999999 6999999999999997532211 111221110 00 0
Q ss_pred ------------------chhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 733 ------------------QILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 733 ------------------~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
.....+++.+.....+|++.||++|||+.|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 236 DVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred hhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 011123334445566999999999999999985
No 143
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.97 E-value=1.1e-30 Score=274.33 Aligned_cols=232 Identities=26% Similarity=0.340 Sum_probs=181.6
Q ss_pred cccccccccceEEEEEecCC-----CeEEEEEEeeccchh-hHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEE
Q 041479 526 NVSYESLVKATVYKGILDLD-----QTFIAVKVLFLHQRG-ALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRA 599 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~-----~~~vAvK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 599 (771)
...+|+|.+|.||+|++... ++.||||.+...... ..+.+.+|++++++++||||+++++++.... ..+
T Consensus 10 ~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-----~~~ 84 (280)
T cd05049 10 KRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGD-----PPI 84 (280)
T ss_pred HhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCC-----CeE
Confidence 44589999999999987543 468999999655433 4678999999999999999999999988775 689
Q ss_pred EEEEeccCCCCCCCc-----------------ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCce
Q 041479 600 LVYEFMHHGSLESCP-----------------RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTA 662 (771)
Q Consensus 600 lv~e~~~~g~L~~~~-----------------~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~ 662 (771)
+||||+++|+|.++. ..+++.++..++.|++.|++|+|+. +++||||||+||+++.++.+
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~ 161 (280)
T cd05049 85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---HFVHRDLATRNCLVGYDLVV 161 (280)
T ss_pred EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeeccccccceEEEcCCCeE
Confidence 999999999986541 2367888999999999999999985 89999999999999999999
Q ss_pred EEecccCccccCcccCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHH
Q 041479 663 HMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFV 726 (771)
Q Consensus 663 kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~ 726 (771)
|++|||+++....... ........+++.|+||| +||++|||++ |+.||.+... ....+..
T Consensus 162 kl~d~g~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~--~~~~~~~ 237 (280)
T cd05049 162 KIGDFGMSRDVYTTDY--YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSN--EEVIECI 237 (280)
T ss_pred EECCcccceecccCcc--eecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCH--HHHHHHH
Confidence 9999999975433221 11112234678899999 6999999999 9999865422 2233333
Q ss_pred HhhCCCchhhhcCccccccCcccChhchhhcCCHHHHHHHHHH
Q 041479 727 KMALPDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIA 769 (771)
Q Consensus 727 ~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~ 769 (771)
...........++..+.....+||..||++|||+.|+++.|++
T Consensus 238 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~~ 280 (280)
T cd05049 238 TQGRLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQK 280 (280)
T ss_pred HcCCcCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhhC
Confidence 3322222334455566667779999999999999999999864
No 144
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.97 E-value=1.3e-30 Score=281.04 Aligned_cols=228 Identities=21% Similarity=0.187 Sum_probs=176.3
Q ss_pred cccccccccceEEEEEec---CCCeEEEEEEeeccc----hhhHHHHHHHHHHHhccC-CCCceeEEEEeecCCCCCcee
Q 041479 526 NVSYESLVKATVYKGILD---LDQTFIAVKVLFLHQ----RGALKSFMAECQALRNIR-HRNLVKIITACSTSDFQGNYF 597 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~---~~~~~vAvK~~~~~~----~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~~~~ 597 (771)
...+|+|.+|+||+++.. .+++.||+|++.... ....+.+..|+++++.++ ||||+++++++...+ .
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~-----~ 79 (332)
T cd05614 5 LKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEA-----K 79 (332)
T ss_pred EEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCC-----E
Confidence 345899999999998764 356799999996432 234567889999999994 999999999987766 7
Q ss_pred EEEEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccC
Q 041479 598 RALVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIP 674 (771)
Q Consensus 598 ~~lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~ 674 (771)
.++||||+++|+|.++ ...+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++...
T Consensus 80 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~ 156 (332)
T cd05614 80 LHLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENILLDSEGHVVLTDFGLSKEFL 156 (332)
T ss_pred EEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeEECCCCCEEEeeCcCCcccc
Confidence 8999999999999765 34688999999999999999999985 89999999999999999999999999998643
Q ss_pred cccCCcccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHh--hCCCchhh
Q 041479 675 EVMSSNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKM--ALPDQILQ 736 (771)
Q Consensus 675 ~~~~~~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~--~~~~~~~~ 736 (771)
.... ......+||+.||||| +||++|||+||+.||...... .....+... ......+.
T Consensus 157 ~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~ 232 (332)
T cd05614 157 SEEK---ERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGER-NTQSEVSRRILKCDPPFPS 232 (332)
T ss_pred ccCC---CccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCC-CCHHHHHHHHhcCCCCCCC
Confidence 3221 1122356999999999 699999999999999642211 111122111 12233444
Q ss_pred hcCccccccCcccChhchhhcC-----CHHHHHH
Q 041479 737 VLDPLFLVGGVQEGEETAEENI-----KKGQIRE 765 (771)
Q Consensus 737 ~~~~~~~~~~~~cl~~~p~~Rp-----t~~~vl~ 765 (771)
.+++.+.....+|++.||++|| ++.++++
T Consensus 233 ~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 266 (332)
T cd05614 233 FIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE 266 (332)
T ss_pred CCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence 5566666677799999999999 6667764
No 145
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=99.97 E-value=1.1e-30 Score=285.09 Aligned_cols=231 Identities=17% Similarity=0.145 Sum_probs=171.2
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEE
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
...+|+|.+|+||+|+...+++.||||++.... ......+.+|+.++.+++||||+++++++.+.. ..|+||
T Consensus 6 ~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~-----~~~lv~ 80 (363)
T cd05628 6 LKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKL-----NLYLIM 80 (363)
T ss_pred eEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCC-----eEEEEE
Confidence 345899999999999999989999999996542 234467889999999999999999999988776 789999
Q ss_pred EeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCC
Q 041479 603 EFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSS 679 (771)
Q Consensus 603 e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 679 (771)
|||++|+|.++ ...+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++........
T Consensus 81 E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~ 157 (363)
T cd05628 81 EFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRT 157 (363)
T ss_pred cCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCCEEEeeccCcccccccccc
Confidence 99999999766 35688999999999999999999985 9999999999999999999999999999765321100
Q ss_pred c-------------------------------ccccccccccccccchh---------------HHHHHHHHHhCCCCCC
Q 041479 680 N-------------------------------QCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTS 713 (771)
Q Consensus 680 ~-------------------------------~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~ 713 (771)
. .......+||+.|+||| +||++|||++|+.||.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~Pf~ 237 (363)
T cd05628 158 EFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFC 237 (363)
T ss_pred cccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCCCC
Confidence 0 00012457999999999 6999999999999997
Q ss_pred ccccCCccHHHHHHhhCCCchh--hhcCccccccCcc--cChhchhhcCCHHHHHH
Q 041479 714 DMFTEGLDLHNFVKMALPDQIL--QVLDPLFLVGGVQ--EGEETAEENIKKGQIRE 765 (771)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~--cl~~~p~~Rpt~~~vl~ 765 (771)
+..... ..............+ ..+++.......+ |...++..||++.|+++
T Consensus 238 ~~~~~~-~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~~~~~r~~r~~~~ei~~ 292 (363)
T cd05628 238 SETPQE-TYKKVMNWKETLIFPPEVPISEKAKDLILRFCCEWEHRIGAPGVEEIKT 292 (363)
T ss_pred CCCHHH-HHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcCChhhcCCCCCHHHHhC
Confidence 532211 122222111111111 1123333322222 43344456789999875
No 146
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=99.97 E-value=9.5e-31 Score=285.38 Aligned_cols=232 Identities=18% Similarity=0.141 Sum_probs=175.9
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRA 599 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 599 (771)
+.....+|+|.+|+||+++++.+++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+.+ ..|
T Consensus 45 y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~-----~~~ 119 (370)
T cd05621 45 YDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDK-----YLY 119 (370)
T ss_pred CeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC-----EEE
Confidence 344556899999999999999999999999996432 233456889999999999999999999988776 789
Q ss_pred EEEEeccCCCCCCC--cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCccc
Q 041479 600 LVYEFMHHGSLESC--PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVM 677 (771)
Q Consensus 600 lv~e~~~~g~L~~~--~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~ 677 (771)
+||||+++|+|.++ ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+|+......
T Consensus 120 lv~Ey~~gg~L~~~l~~~~~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~ 196 (370)
T cd05621 120 MVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETG 196 (370)
T ss_pred EEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEEecccceecccCC
Confidence 99999999999776 33578888999999999999999985 99999999999999999999999999998654322
Q ss_pred CCcccccccccccccccchh-------------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchh--h
Q 041479 678 SSNQCSSVGLKGTVGYATPE-------------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQIL--Q 736 (771)
Q Consensus 678 ~~~~~~~~~~~gt~~y~aPE-------------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~--~ 736 (771)
. ......+||+.||||| +||++|||++|+.||.+.... ....++.........+ .
T Consensus 197 ~---~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~-~~~~~i~~~~~~~~~p~~~ 272 (370)
T cd05621 197 M---VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLV-GTYSKIMDHKNSLNFPEDV 272 (370)
T ss_pred c---eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHH-HHHHHHHhCCcccCCCCcc
Confidence 1 1123457999999999 599999999999999653211 1122333222111111 1
Q ss_pred hcCccccccCcccChhchhh--cCCHHHHHHH
Q 041479 737 VLDPLFLVGGVQEGEETAEE--NIKKGQIRES 766 (771)
Q Consensus 737 ~~~~~~~~~~~~cl~~~p~~--Rpt~~~vl~~ 766 (771)
.++.........|+..++.+ |||+.|+++.
T Consensus 273 ~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 273 EISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred cCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 23333444445677644443 8899998753
No 147
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.97 E-value=7e-31 Score=273.94 Aligned_cols=232 Identities=20% Similarity=0.215 Sum_probs=181.6
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
+.....+|+|.+|.||+|+...+++.||+|++..........+.+|+.++++++||||+++++++...+ ..++||
T Consensus 11 y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~-----~~~iv~ 85 (267)
T cd06646 11 YELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSRE-----KLWICM 85 (267)
T ss_pred cchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCC-----EEEEEE
Confidence 344556899999999999998888899999997655445567889999999999999999999988766 789999
Q ss_pred EeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCC
Q 041479 603 EFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSS 679 (771)
Q Consensus 603 e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 679 (771)
||+++|+|.++ ...+++..+..++.|++.|++|||+. +|+|||+||+||+++.++.+||+|||+++.......
T Consensus 86 e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~- 161 (267)
T cd06646 86 EYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLTDNGDVKLADFGVAAKITATIA- 161 (267)
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEECcCccceeeccccc-
Confidence 99999999765 34678899999999999999999985 999999999999999999999999999986543211
Q ss_pred cccccccccccccccchh------------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCC-Cc--hhhhc
Q 041479 680 NQCSSVGLKGTVGYATPE------------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALP-DQ--ILQVL 738 (771)
Q Consensus 680 ~~~~~~~~~gt~~y~aPE------------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~-~~--~~~~~ 738 (771)
......|++.|+||| +||++|||++|+.||.+...... ...+...... .. ....+
T Consensus 162 ---~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 237 (267)
T cd06646 162 ---KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA-LFLMSKSNFQPPKLKDKTKW 237 (267)
T ss_pred ---ccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhh-heeeecCCCCCCCCcccccc
Confidence 112346889999999 69999999999999865322111 1111111111 11 11223
Q ss_pred CccccccCcccChhchhhcCCHHHHHHHH
Q 041479 739 DPLFLVGGVQEGEETAEENIKKGQIRESL 767 (771)
Q Consensus 739 ~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L 767 (771)
+..+.....+||..+|++|||++++++.|
T Consensus 238 ~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 238 SSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred CHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 44555667799999999999999998753
No 148
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.97 E-value=1.9e-30 Score=268.75 Aligned_cols=227 Identities=20% Similarity=0.212 Sum_probs=183.2
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeecc--chhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEE
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLH--QRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYE 603 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e 603 (771)
...+|+|.+|.||+|+.+.+++.||+|.+... .....+++.+|++++++++||||+++++++.+.+ ..|+|||
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~lv~e 79 (256)
T cd08529 5 LNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKG-----KLNIVME 79 (256)
T ss_pred eEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCC-----EEEEEEE
Confidence 34578999999999999998999999998643 3445678999999999999999999999988766 7899999
Q ss_pred eccCCCCCCC-----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccC
Q 041479 604 FMHHGSLESC-----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMS 678 (771)
Q Consensus 604 ~~~~g~L~~~-----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 678 (771)
|+++++|.++ ...+++..+..++.|++.|+.|||+. +|+||||||+||+++.++.+|++|||+++.......
T Consensus 80 ~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~ 156 (256)
T cd08529 80 YAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTN 156 (256)
T ss_pred eCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEeCCCCEEEcccccceeccCccc
Confidence 9999999765 24578888999999999999999985 999999999999999999999999999886654321
Q ss_pred Ccccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCcccc
Q 041479 679 SNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFL 743 (771)
Q Consensus 679 ~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 743 (771)
......|++.|+||| |||++|||++|+.||.... ...................++..+.
T Consensus 157 ----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (256)
T cd08529 157 ----FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANN--QGALILKIIRGVFPPVSQMYSQQLA 230 (256)
T ss_pred ----hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHHcCCCCCCccccCHHHH
Confidence 112346889999999 6999999999999996432 1112222222222334445666677
Q ss_pred ccCcccChhchhhcCCHHHHHHH
Q 041479 744 VGGVQEGEETAEENIKKGQIRES 766 (771)
Q Consensus 744 ~~~~~cl~~~p~~Rpt~~~vl~~ 766 (771)
....+||+.+|++||++.++++.
T Consensus 231 ~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 231 QLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred HHHHHHccCCcccCcCHHHHhhC
Confidence 77789999999999999999863
No 149
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.97 E-value=1.9e-30 Score=271.26 Aligned_cols=229 Identities=25% Similarity=0.286 Sum_probs=177.0
Q ss_pred cccccccceEEEEEecCCCe--EEEEEEeecc-chhhHHHHHHHHHHHhcc-CCCCceeEEEEeecCCCCCceeEEEEEE
Q 041479 528 SYESLVKATVYKGILDLDQT--FIAVKVLFLH-QRGALKSFMAECQALRNI-RHRNLVKIITACSTSDFQGNYFRALVYE 603 (771)
Q Consensus 528 ~l~~~~~~~Vy~~~~~~~~~--~vAvK~~~~~-~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~~~~lv~e 603 (771)
.+|+|.+|.||+|+++.++. .+|+|.+... .....+.+.+|++++.++ +||||+++++++...+ ..++|||
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~-----~~~lv~e 76 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG-----YLYLAIE 76 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCC-----CceEEEE
Confidence 37899999999999987764 4688888643 234557899999999999 7999999999988766 5799999
Q ss_pred eccCCCCCCCc-------------------ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEE
Q 041479 604 FMHHGSLESCP-------------------RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHM 664 (771)
Q Consensus 604 ~~~~g~L~~~~-------------------~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl 664 (771)
|+++|+|.++. ..+++.++..++.|++.|++|||+. +++||||||+||++++++.+|+
T Consensus 77 ~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nili~~~~~~kl 153 (270)
T cd05047 77 YAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKI 153 (270)
T ss_pred eCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccccceEEEcCCCeEEE
Confidence 99999986541 1367889999999999999999985 9999999999999999999999
Q ss_pred ecccCccccCcccCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHh
Q 041479 665 GDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKM 728 (771)
Q Consensus 665 ~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~ 728 (771)
+|||+++...... .......++.|+||| |||++|||++ |..||.+... ....+....
T Consensus 154 ~dfgl~~~~~~~~-----~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~--~~~~~~~~~ 226 (270)
T cd05047 154 ADFGLSRGQEVYV-----KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC--AELYEKLPQ 226 (270)
T ss_pred CCCCCccccchhh-----hccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCH--HHHHHHHhC
Confidence 9999986322111 111122456799999 6999999997 9999965321 112222222
Q ss_pred hCCCchhhhcCccccccCcccChhchhhcCCHHHHHHHHHHhC
Q 041479 729 ALPDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAIL 771 (771)
Q Consensus 729 ~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~l 771 (771)
.........++..+.....+||..+|.+|||+.++++.|++++
T Consensus 227 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 227 GYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred CCCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 2222233344555666677999999999999999999999875
No 150
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.97 E-value=1.6e-30 Score=273.30 Aligned_cols=235 Identities=23% Similarity=0.325 Sum_probs=183.5
Q ss_pred ccccccccccccceEEEEEec-----CCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCcee
Q 041479 523 LLLNVSYESLVKATVYKGILD-----LDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYF 597 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~-----~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 597 (771)
......+|+|++|+||++... .++..||+|.+........+.+.+|++++++++||||+++++++...+ .
T Consensus 7 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~ 81 (280)
T cd05092 7 IVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGR-----P 81 (280)
T ss_pred ceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCC-----c
Confidence 334567899999999999753 245689999987666666788999999999999999999999988766 5
Q ss_pred EEEEEEeccCCCCCCCc------------------ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCC
Q 041479 598 RALVYEFMHHGSLESCP------------------RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDND 659 (771)
Q Consensus 598 ~~lv~e~~~~g~L~~~~------------------~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~ 659 (771)
.+++|||+++|+|.++. ..+++.++..++.|++.|++|||+. +|+||||||+||+++++
T Consensus 82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~nil~~~~ 158 (280)
T cd05092 82 LLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---HFVHRDLATRNCLVGQG 158 (280)
T ss_pred eEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---CeecccccHhhEEEcCC
Confidence 79999999999986551 2478899999999999999999985 99999999999999999
Q ss_pred CceEEecccCccccCcccCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHH
Q 041479 660 MTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLH 723 (771)
Q Consensus 660 ~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~ 723 (771)
+.+||+|||+++........ .......+++.|+||| |||++||+++ |+.||.+... ....
T Consensus 159 ~~~kL~dfg~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--~~~~ 234 (280)
T cd05092 159 LVVKIGDFGMSRDIYSTDYY--RVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSN--TEAI 234 (280)
T ss_pred CCEEECCCCceeEcCCCcee--ecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCH--HHHH
Confidence 99999999999755332211 1112233578899999 6999999999 8999865322 1222
Q ss_pred HHHHhhCCCchhhhcCccccccCcccChhchhhcCCHHHHHHHHHH
Q 041479 724 NFVKMALPDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIA 769 (771)
Q Consensus 724 ~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~ 769 (771)
+......+...+..+++.+.....+||+.||++||++.||++.|++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~~ 280 (280)
T cd05092 235 ECITQGRELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQA 280 (280)
T ss_pred HHHHcCccCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHhC
Confidence 2222222333334455666677779999999999999999999863
No 151
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=99.97 E-value=6.7e-31 Score=287.08 Aligned_cols=230 Identities=17% Similarity=0.172 Sum_probs=175.1
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEE
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
...+|+|.+|+||+|++..+++.||||++.... ....+.+.+|++++..++||||+++++++.+.+ ..|+||
T Consensus 6 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~-----~~~lv~ 80 (364)
T cd05599 6 IKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDEN-----YLYLIM 80 (364)
T ss_pred EEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCC-----eEEEEE
Confidence 346899999999999999999999999997542 334567889999999999999999999988776 789999
Q ss_pred EeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCC
Q 041479 603 EFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSS 679 (771)
Q Consensus 603 e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 679 (771)
||+++|+|.++ ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.+......
T Consensus 81 E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~ 157 (364)
T cd05599 81 EYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRT 157 (364)
T ss_pred CCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEeecccceeccccccc
Confidence 99999999776 34688999999999999999999986 8999999999999999999999999998754321110
Q ss_pred cc----------------------------------cccccccccccccchh---------------HHHHHHHHHhCCC
Q 041479 680 NQ----------------------------------CSSVGLKGTVGYATPE---------------YGILLLEIFTGKR 710 (771)
Q Consensus 680 ~~----------------------------------~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~ 710 (771)
.. ......+||+.||||| +||++|||++|+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G~~ 237 (364)
T cd05599 158 EFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYP 237 (364)
T ss_pred cccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcCCC
Confidence 00 0111346999999999 6999999999999
Q ss_pred CCCccccCCccHHHHHHhhC--CCchhhhcCccccccCcccChhchhhcCC---HHHHHH
Q 041479 711 PTSDMFTEGLDLHNFVKMAL--PDQILQVLDPLFLVGGVQEGEETAEENIK---KGQIRE 765 (771)
Q Consensus 711 P~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt---~~~vl~ 765 (771)
||.+..... .......... +......+++.......+|+. +|.+|++ +.++++
T Consensus 238 Pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~ 295 (364)
T cd05599 238 PFCSDNPQE-TYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKS 295 (364)
T ss_pred CCCCCCHHH-HHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhc
Confidence 997532111 1111111111 111111234444445557775 9999998 888765
No 152
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.97 E-value=1.5e-30 Score=271.38 Aligned_cols=233 Identities=21% Similarity=0.247 Sum_probs=184.5
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeecc---chhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEE
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLH---QRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
...+|+|.+|.||+|+...+++.||||.+... .....+++.+|+++++.++||||+++++++.+.+ ..+++|
T Consensus 7 ~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-----~~~~v~ 81 (267)
T cd08229 7 EKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDN-----ELNIVL 81 (267)
T ss_pred hhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCC-----eEEEEE
Confidence 34578999999999999888889999988543 2334568999999999999999999999988766 679999
Q ss_pred EeccCCCCCCC-------cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCc
Q 041479 603 EFMHHGSLESC-------PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPE 675 (771)
Q Consensus 603 e~~~~g~L~~~-------~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~ 675 (771)
||+++++|.++ ...+++..+..++.|++.|++|||+. +++|+||||+||+++.++.++++|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence 99999999764 23578899999999999999999985 999999999999999999999999999876543
Q ss_pred ccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHH-HhhCCCchhhhcC
Q 041479 676 VMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFV-KMALPDQILQVLD 739 (771)
Q Consensus 676 ~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 739 (771)
... ......|+..|+||| +|+++|||++|..||...........+.. ....+......++
T Consensus 159 ~~~----~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (267)
T cd08229 159 KTT----AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYS 234 (267)
T ss_pred CCc----ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcCCCCCCCccccc
Confidence 221 112346889999999 69999999999999864321111121211 1222222334455
Q ss_pred ccccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 740 PLFLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 740 ~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
+.+.....+||..||++||||.+|++.++++
T Consensus 235 ~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~ 265 (267)
T cd08229 235 EELRQLVNMCINPDPEKRPDITYVYDVAKRM 265 (267)
T ss_pred HHHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence 6666677799999999999999999999875
No 153
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.97 E-value=2.9e-30 Score=269.17 Aligned_cols=234 Identities=22% Similarity=0.275 Sum_probs=183.4
Q ss_pred ccccccccccceEEEEEecCCCeEEEEEEeecc---chhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEE
Q 041479 525 LNVSYESLVKATVYKGILDLDQTFIAVKVLFLH---QRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALV 601 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv 601 (771)
....+|+|.+|.||+|....+++.||+|.++.. .....+++.+|++++++++|+||+++++++.+.+ ..++|
T Consensus 6 ~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~-----~~~lv 80 (267)
T cd08224 6 IEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENN-----ELNIV 80 (267)
T ss_pred eeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCC-----eEEEE
Confidence 344579999999999999988889999988642 2334678999999999999999999999988765 67999
Q ss_pred EEeccCCCCCCC-------cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccC
Q 041479 602 YEFMHHGSLESC-------PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIP 674 (771)
Q Consensus 602 ~e~~~~g~L~~~-------~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~ 674 (771)
|||+++|+|..+ ...+++.++..++.+++.|+.|||+. +|+||||||+||+++.++.++++|||+++...
T Consensus 81 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~ 157 (267)
T cd08224 81 LELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVFITATGVVKLGDLGLGRFFS 157 (267)
T ss_pred EecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhEEECCCCcEEEeccceeeecc
Confidence 999999999654 23478889999999999999999985 99999999999999999999999999987654
Q ss_pred cccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHh-hCCCchhhhc
Q 041479 675 EVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKM-ALPDQILQVL 738 (771)
Q Consensus 675 ~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 738 (771)
.... ......|++.|+||| +||++||+++|+.||...........+.... ..++......
T Consensus 158 ~~~~----~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (267)
T cd08224 158 SKTT----AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDYPPLPADHY 233 (267)
T ss_pred CCCc----ccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCCCCCCChhhc
Confidence 3221 112345888999999 6999999999999985432111111121111 1222112244
Q ss_pred CccccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 739 DPLFLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 739 ~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
+..+.....+||..+|++|||+.++++.|+++
T Consensus 234 ~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~ 265 (267)
T cd08224 234 SEELRDLVSRCINPDPEKRPDISYVLQVAKEM 265 (267)
T ss_pred CHHHHHHHHHHcCCCcccCCCHHHHHHHHHHh
Confidence 55555667799999999999999999999875
No 154
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.97 E-value=1.5e-30 Score=276.72 Aligned_cols=234 Identities=25% Similarity=0.280 Sum_probs=178.9
Q ss_pred ccccccccccccceEEEEEecCCCe--EEEEEEeecc-chhhHHHHHHHHHHHhcc-CCCCceeEEEEeecCCCCCceeE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQT--FIAVKVLFLH-QRGALKSFMAECQALRNI-RHRNLVKIITACSTSDFQGNYFR 598 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~--~vAvK~~~~~-~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~~~ 598 (771)
+.....+|+|.+|.||+|+++.++. .+|+|.+... .....+.+.+|++++.++ +||||+++++++.+.+ ..
T Consensus 9 ~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~-----~~ 83 (303)
T cd05088 9 IKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG-----YL 83 (303)
T ss_pred ceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCC-----Cc
Confidence 3445568999999999999877654 4577776543 234557889999999999 8999999999987766 67
Q ss_pred EEEEEeccCCCCCCCc-------------------ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCC
Q 041479 599 ALVYEFMHHGSLESCP-------------------RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDND 659 (771)
Q Consensus 599 ~lv~e~~~~g~L~~~~-------------------~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~ 659 (771)
|+||||+++|+|.++. ..+++.++..++.|++.|++|||+. +|+||||||+||+++.+
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dlkp~Nili~~~ 160 (303)
T cd05088 84 YLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGEN 160 (303)
T ss_pred eEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEecCC
Confidence 9999999999986641 2468889999999999999999985 99999999999999999
Q ss_pred CceEEecccCccccCcccCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHH
Q 041479 660 MTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLH 723 (771)
Q Consensus 660 ~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~ 723 (771)
+.+||+|||+++...... ......++..|+||| |||++||++| |..||.+... ....
T Consensus 161 ~~~kl~dfg~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--~~~~ 233 (303)
T cd05088 161 YVAKIADFGLSRGQEVYV-----KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC--AELY 233 (303)
T ss_pred CcEEeCccccCcccchhh-----hcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCCh--HHHH
Confidence 999999999986432111 111123466799999 6999999998 9999864322 1222
Q ss_pred HHHHhhCCCchhhhcCccccccCcccChhchhhcCCHHHHHHHHHHhC
Q 041479 724 NFVKMALPDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAIL 771 (771)
Q Consensus 724 ~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~l 771 (771)
+......+...+..+++.+.....+||+.+|++||++.++++.|++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~ 281 (303)
T cd05088 234 EKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 281 (303)
T ss_pred HHHhcCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 222222222223334555666677999999999999999999998763
No 155
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.97 E-value=2.4e-30 Score=272.36 Aligned_cols=237 Identities=22% Similarity=0.208 Sum_probs=177.7
Q ss_pred ccccccccceEEEEEe----cCCCeEEEEEEeeccc-hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEE
Q 041479 527 VSYESLVKATVYKGIL----DLDQTFIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALV 601 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~----~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv 601 (771)
..+|+|.+|+||++.. ..+++.||+|.+.... ....+.|.+|++++++++||||+++++++...+. ...++|
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~---~~~~lv 86 (283)
T cd05080 10 RVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGG---KGLQLI 86 (283)
T ss_pred eecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCC---ceEEEE
Confidence 4579999999977653 3456689999996543 2345788999999999999999999999865432 257899
Q ss_pred EEeccCCCCCCC--cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCC
Q 041479 602 YEFMHHGSLESC--PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSS 679 (771)
Q Consensus 602 ~e~~~~g~L~~~--~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 679 (771)
|||+++|+|.++ ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+|++|||+++........
T Consensus 87 ~e~~~~~~l~~~~~~~~l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~ 163 (283)
T cd05080 87 MEYVPLGSLRDYLPKHKLNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEY 163 (283)
T ss_pred ecCCCCCCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEEEcCCCcEEEeecccccccCCcchh
Confidence 999999999776 34689999999999999999999985 8999999999999999999999999999866432211
Q ss_pred cccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCcc-------------HHHHHHhhCC
Q 041479 680 NQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLD-------------LHNFVKMALP 731 (771)
Q Consensus 680 ~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~-------------~~~~~~~~~~ 731 (771)
. .......++..|+||| +|+++|||+||..|+......-.. +.+.......
T Consensus 164 ~-~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (283)
T cd05080 164 Y-RVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMR 242 (283)
T ss_pred h-ccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcCCC
Confidence 0 1111223567799999 699999999999998543211000 0111111111
Q ss_pred CchhhhcCccccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 732 DQILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 732 ~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
...+......+.....+||+.+|++|||++++++.|+++
T Consensus 243 ~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~ 281 (283)
T cd05080 243 LPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEM 281 (283)
T ss_pred CCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHh
Confidence 112223344555667799999999999999999999986
No 156
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.97 E-value=1.8e-30 Score=278.89 Aligned_cols=219 Identities=20% Similarity=0.178 Sum_probs=171.6
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCC-CCceeEEEEeecCCCCCceeEEEEE
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRH-RNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H-~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
..+|+|.+|+||+|+.+.+++.||||++.... ....+.+..|++++..++| ++|+++++++.+.+ ..|+||
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~-----~~~lv~ 80 (324)
T cd05587 6 MVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMD-----RLYFVM 80 (324)
T ss_pred EEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCC-----EEEEEE
Confidence 45799999999999999988899999996542 3445778899999999976 46888888887766 789999
Q ss_pred EeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCC
Q 041479 603 EFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSS 679 (771)
Q Consensus 603 e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 679 (771)
||+++|+|.+. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 81 E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~-- 155 (324)
T cd05587 81 EYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGG-- 155 (324)
T ss_pred cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEcCCCCEEEeecCcceecCCCC--
Confidence 99999999765 34578899999999999999999985 99999999999999999999999999987432111
Q ss_pred cccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCccccc
Q 041479 680 NQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFLV 744 (771)
Q Consensus 680 ~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 744 (771)
......+||+.|+||| +||++|||+||+.||.+.... ........ .....+..+++.+..
T Consensus 156 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~--~~~~~i~~-~~~~~~~~~~~~~~~ 230 (324)
T cd05587 156 --KTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED--ELFQSIME-HNVSYPKSLSKEAVS 230 (324)
T ss_pred --CceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH--HHHHHHHc-CCCCCCCCCCHHHHH
Confidence 1122356999999999 699999999999999753221 12111111 122233445666656
Q ss_pred cCcccChhchhhcCCH
Q 041479 745 GGVQEGEETAEENIKK 760 (771)
Q Consensus 745 ~~~~cl~~~p~~Rpt~ 760 (771)
...+|+.+||++||+.
T Consensus 231 li~~~l~~~P~~R~~~ 246 (324)
T cd05587 231 ICKGLLTKHPAKRLGC 246 (324)
T ss_pred HHHHHhhcCHHHcCCC
Confidence 6779999999999986
No 157
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.97 E-value=2.8e-30 Score=269.52 Aligned_cols=235 Identities=22% Similarity=0.318 Sum_probs=182.1
Q ss_pred cccccccccceEEEEEecCCC---eEEEEEEeeccc-hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEE
Q 041479 526 NVSYESLVKATVYKGILDLDQ---TFIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALV 601 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~---~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv 601 (771)
...+|+|.+|.||+|++..++ ..||+|.++... ....+.+.+|+.++++++||||+++++++.+.+ ..|+|
T Consensus 9 ~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~lv 83 (267)
T cd05066 9 EKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSK-----PVMIV 83 (267)
T ss_pred eeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCC-----ccEEE
Confidence 345799999999999886433 379999986542 334578999999999999999999999987765 67999
Q ss_pred EEeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCccc
Q 041479 602 YEFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVM 677 (771)
Q Consensus 602 ~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~ 677 (771)
|||+++|+|.++ ...+++.++..++.|++.|++|||+. +++||||||+||+++.++.+|++|||+++.+....
T Consensus 84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd05066 84 TEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP 160 (267)
T ss_pred EEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEEECCCCeEEeCCCCccccccccc
Confidence 999999999776 23578899999999999999999985 89999999999999999999999999998765432
Q ss_pred CCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhhhcCcc
Q 041479 678 SSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPL 741 (771)
Q Consensus 678 ~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 741 (771)
.. ........++..|+||| ||+++||+++ |+.||.+... ....+......+......+++.
T Consensus 161 ~~-~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 237 (267)
T cd05066 161 EA-AYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSN--QDVIKAIEEGYRLPAPMDCPAA 237 (267)
T ss_pred ce-eeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCH--HHHHHHHhCCCcCCCCCCCCHH
Confidence 21 11112223456899999 6999999887 9999965422 1233333333222222334455
Q ss_pred ccccCcccChhchhhcCCHHHHHHHHHHhC
Q 041479 742 FLVGGVQEGEETAEENIKKGQIRESLIAIL 771 (771)
Q Consensus 742 ~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~l 771 (771)
+.....+|++++|++||+|.++++.|++++
T Consensus 238 ~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~ 267 (267)
T cd05066 238 LHQLMLDCWQKDRNERPKFEQIVSILDKLI 267 (267)
T ss_pred HHHHHHHHcccCchhCCCHHHHHHHHHhhC
Confidence 556677999999999999999999999875
No 158
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=99.97 E-value=5.5e-31 Score=286.24 Aligned_cols=230 Identities=20% Similarity=0.216 Sum_probs=179.6
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEE
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
...+|+|.+|+||+|++..+++.||||++.... ....+.+.+|++++..++||||+++++++.+.+ ..|+||
T Consensus 6 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-----~~~lv~ 80 (350)
T cd05573 6 IKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEE-----HLYLVM 80 (350)
T ss_pred EEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCC-----eEEEEE
Confidence 446899999999999999888999999997542 244568899999999999999999999987766 789999
Q ss_pred EeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccC-
Q 041479 603 EFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMS- 678 (771)
Q Consensus 603 e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~- 678 (771)
||+++|+|.++ ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 81 e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~ 157 (350)
T cd05573 81 EYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKL---GFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDR 157 (350)
T ss_pred cCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEeecCCCCccCcccCcc
Confidence 99999999766 34688899999999999999999985 999999999999999999999999999986543320
Q ss_pred ------------------------Ccccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCC
Q 041479 679 ------------------------SNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEG 719 (771)
Q Consensus 679 ------------------------~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~ 719 (771)
..........||+.|+||| +||++|||++|+.||.+....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~- 236 (350)
T cd05573 158 EYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQ- 236 (350)
T ss_pred cccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCHH-
Confidence 0011123456999999999 699999999999999753211
Q ss_pred ccHHHHHH--hhCCCchhhhcCccccccCcccChhchhhcCC-HHHHHH
Q 041479 720 LDLHNFVK--MALPDQILQVLDPLFLVGGVQEGEETAEENIK-KGQIRE 765 (771)
Q Consensus 720 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt-~~~vl~ 765 (771)
........ ..........+++.+.....+|+. ||.+||+ +.++++
T Consensus 237 ~~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~ 284 (350)
T cd05573 237 ETYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKS 284 (350)
T ss_pred HHHHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhc
Confidence 11222222 111111112245566666668997 9999999 999986
No 159
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=99.97 E-value=2.2e-30 Score=274.19 Aligned_cols=235 Identities=24% Similarity=0.310 Sum_probs=181.9
Q ss_pred ccccccccccceEEEEEecCC-----CeEEEEEEeeccc-hhhHHHHHHHHHHHhcc-CCCCceeEEEEeecCCCCCcee
Q 041479 525 LNVSYESLVKATVYKGILDLD-----QTFIAVKVLFLHQ-RGALKSFMAECQALRNI-RHRNLVKIITACSTSDFQGNYF 597 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~~-----~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~~ 597 (771)
....+|+|.+|.||++.+... ...||+|.+.... .....++.+|++++.++ +||||+++++++...+ .
T Consensus 16 ~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~-----~ 90 (293)
T cd05053 16 LGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEG-----P 90 (293)
T ss_pred EeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCC-----C
Confidence 345679999999999988643 3689999986532 33456789999999999 7999999999987766 6
Q ss_pred EEEEEEeccCCCCCCC-------------------cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCC
Q 041479 598 RALVYEFMHHGSLESC-------------------PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN 658 (771)
Q Consensus 598 ~~lv~e~~~~g~L~~~-------------------~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~ 658 (771)
.+++|||+++|+|..+ ...+++..+..++.|++.|++|||+. +|+||||||+||+++.
T Consensus 91 ~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~Nil~~~ 167 (293)
T cd05053 91 LYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRDLAARNVLVTE 167 (293)
T ss_pred eEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CccccccceeeEEEcC
Confidence 7999999999998644 23578889999999999999999985 9999999999999999
Q ss_pred CCceEEecccCccccCcccCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccH
Q 041479 659 DMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDL 722 (771)
Q Consensus 659 ~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~ 722 (771)
++.+|++|||+++.+....... ......++..|+||| |||++||+++ |..||..... ...
T Consensus 168 ~~~~kL~Dfg~~~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--~~~ 243 (293)
T cd05053 168 DHVMKIADFGLARDIHHIDYYR--KTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV--EEL 243 (293)
T ss_pred CCeEEeCcccccccccccccee--ccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCH--HHH
Confidence 9999999999998765432211 112223567899999 6999999998 9999865321 122
Q ss_pred HHHHHhhCCCchhhhcCccccccCcccChhchhhcCCHHHHHHHHHHhC
Q 041479 723 HNFVKMALPDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAIL 771 (771)
Q Consensus 723 ~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~l 771 (771)
.+..........+...+..+.....+||..||++||||.|+++.|++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 244 FKLLKEGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred HHHHHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 2333332222233334455556677999999999999999999999875
No 160
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.97 E-value=1.2e-30 Score=286.88 Aligned_cols=230 Identities=20% Similarity=0.219 Sum_probs=171.2
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEE
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
...+|+|.+|+||+|+...+++.||||++.... ....+.+.+|++++++++|||||++++++.+.+ ..|+||
T Consensus 6 ~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~-----~~~lv~ 80 (382)
T cd05625 6 IKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKD-----NLYFVM 80 (382)
T ss_pred EEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCC-----EEEEEE
Confidence 345899999999999999999999999996542 334567899999999999999999999988776 789999
Q ss_pred EeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccC-
Q 041479 603 EFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMS- 678 (771)
Q Consensus 603 e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~- 678 (771)
|||++|+|.+. ...+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 81 E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~ 157 (382)
T cd05625 81 DYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDS 157 (382)
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEeECCCCccccccccc
Confidence 99999999765 34578888899999999999999986 899999999999999999999999999853311000
Q ss_pred ------------------------------------------Ccccccccccccccccchh---------------HHHH
Q 041479 679 ------------------------------------------SNQCSSVGLKGTVGYATPE---------------YGIL 701 (771)
Q Consensus 679 ------------------------------------------~~~~~~~~~~gt~~y~aPE---------------~Gv~ 701 (771)
.........+||+.||||| +||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvi 237 (382)
T cd05625 158 KYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVI 237 (382)
T ss_pred cccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechHH
Confidence 0000112357999999999 6999
Q ss_pred HHHHHhCCCCCCccccCCccHHHHHHhhC--CCchhhhcCccccccCcccChhchhhcCC---HHHHHH
Q 041479 702 LLEIFTGKRPTSDMFTEGLDLHNFVKMAL--PDQILQVLDPLFLVGGVQEGEETAEENIK---KGQIRE 765 (771)
Q Consensus 702 l~el~tg~~P~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt---~~~vl~ 765 (771)
+|||++|+.||.+..... .......... +......+++.......+++ .+|.+|++ +.++++
T Consensus 238 l~elltG~~Pf~~~~~~~-~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~ 304 (382)
T cd05625 238 LYEMLVGQPPFLAQTPLE-TQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKA 304 (382)
T ss_pred HHHHHhCCCCCCCCCHHH-HHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhc
Confidence 999999999997532211 1222222111 11111223344433333443 59999997 777654
No 161
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=99.97 E-value=1.5e-30 Score=279.68 Aligned_cols=223 Identities=26% Similarity=0.243 Sum_probs=170.7
Q ss_pred cccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHH-HHhccCCCCceeEEEEeecCCCCCceeEEEEEE
Q 041479 528 SYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQ-ALRNIRHRNLVKIITACSTSDFQGNYFRALVYE 603 (771)
Q Consensus 528 ~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~-~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e 603 (771)
.+|+|.+|+||+|+++.+++.||+|++.... ......+..|.. +++.++||||+++++++.+.+ ..|+|||
T Consensus 2 ~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~-----~~~lv~e 76 (325)
T cd05602 2 VIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTAD-----KLYFVLD 76 (325)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCC-----eEEEEEe
Confidence 4799999999999999998899999996542 222344555554 567889999999999988776 7899999
Q ss_pred eccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCc
Q 041479 604 FMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSN 680 (771)
Q Consensus 604 ~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 680 (771)
|+++|+|.++ ...+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 77 ~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~--- 150 (325)
T cd05602 77 YINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN--- 150 (325)
T ss_pred CCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEEccCCCCcccccCC---
Confidence 9999999765 34577788888999999999999985 99999999999999999999999999997532211
Q ss_pred ccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCcccccc
Q 041479 681 QCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFLVG 745 (771)
Q Consensus 681 ~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 745 (771)
......+||+.||||| +||++|||++|+.||.+... ....+.... .+......+++.+...
T Consensus 151 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--~~~~~~i~~-~~~~~~~~~~~~~~~l 226 (325)
T cd05602 151 -GTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT--AEMYDNILN-KPLQLKPNITNSARHL 226 (325)
T ss_pred -CCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCH--HHHHHHHHh-CCcCCCCCCCHHHHHH
Confidence 1123456999999999 69999999999999965321 112122211 1222333445555566
Q ss_pred CcccChhchhhcCCHHHHHH
Q 041479 746 GVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 746 ~~~cl~~~p~~Rpt~~~vl~ 765 (771)
..+|+++||++||++.+.+.
T Consensus 227 i~~~l~~~p~~R~~~~~~~~ 246 (325)
T cd05602 227 LEGLLQKDRTKRLGAKDDFM 246 (325)
T ss_pred HHHHcccCHHHCCCCCCCHH
Confidence 67999999999999875443
No 162
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.97 E-value=6.9e-31 Score=281.34 Aligned_cols=220 Identities=23% Similarity=0.238 Sum_probs=172.5
Q ss_pred cccccccceEEEEEe---cCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEE
Q 041479 528 SYESLVKATVYKGIL---DLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 528 ~l~~~~~~~Vy~~~~---~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
.+|+|.+|+||+++. +.+++.||||++.... ......+..|++++++++||||+++++++.+.+ ..|+||
T Consensus 3 ~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-----~~~lv~ 77 (318)
T cd05582 3 VLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEG-----KLYLIL 77 (318)
T ss_pred eeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCC-----EEEEEE
Confidence 479999999999876 3467799999997543 223456788999999999999999999988766 789999
Q ss_pred EeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCC
Q 041479 603 EFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSS 679 (771)
Q Consensus 603 e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 679 (771)
||+++|+|.++ ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 78 e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~- 153 (318)
T cd05582 78 DFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK- 153 (318)
T ss_pred cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCC-
Confidence 99999999765 34588999999999999999999985 899999999999999999999999999975433211
Q ss_pred cccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCccccc
Q 041479 680 NQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFLV 744 (771)
Q Consensus 680 ~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 744 (771)
......||+.|+||| +||++|||++|+.||....... ........ ....+..+++.+..
T Consensus 154 ---~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~-~~~~i~~~--~~~~p~~~~~~~~~ 227 (318)
T cd05582 154 ---KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKE-TMTMILKA--KLGMPQFLSPEAQS 227 (318)
T ss_pred ---ceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHH-HHHHHHcC--CCCCCCCCCHHHHH
Confidence 122356899999999 6999999999999996532111 11111111 12233445666666
Q ss_pred cCcccChhchhhcCCHHH
Q 041479 745 GGVQEGEETAEENIKKGQ 762 (771)
Q Consensus 745 ~~~~cl~~~p~~Rpt~~~ 762 (771)
...+||+.||++||++.+
T Consensus 228 li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 228 LLRALFKRNPANRLGAGP 245 (318)
T ss_pred HHHHHhhcCHhHcCCCCC
Confidence 677999999999999544
No 163
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.97 E-value=2.2e-30 Score=268.42 Aligned_cols=228 Identities=24% Similarity=0.304 Sum_probs=178.9
Q ss_pred ccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEe
Q 041479 525 LNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEF 604 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~ 604 (771)
....+|+|.+|.||+|.++.+ ..+|+|++.... ....+|.+|++++++++||||+++++++.+.+ ..|+||||
T Consensus 8 ~~~~lg~G~~~~v~~~~~~~~-~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-----~~~lv~e~ 80 (256)
T cd05059 8 FLKELGSGQFGVVHLGKWRGK-IDVAIKMIREGA-MSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQR-----PIFIVTEY 80 (256)
T ss_pred hhhhhccCCCceEEEeEecCC-ccEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCC-----ceEEEEec
Confidence 344579999999999998754 489999985432 23467889999999999999999999987665 67999999
Q ss_pred ccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCc
Q 041479 605 MHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSN 680 (771)
Q Consensus 605 ~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 680 (771)
+++++|.++ ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+|++|||+++.......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~-- 155 (256)
T cd05059 81 MANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQY-- 155 (256)
T ss_pred CCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEEECCCCcEEECCcccceecccccc--
Confidence 999999765 23578999999999999999999985 899999999999999999999999999986543211
Q ss_pred ccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhhhcCccccc
Q 041479 681 QCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFLV 744 (771)
Q Consensus 681 ~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 744 (771)
....+..++..|+||| ||+++||+++ |+.||..... ...........+...+...++.+..
T Consensus 156 -~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (256)
T cd05059 156 -TSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSN--SEVVESVSAGYRLYRPKLAPTEVYT 232 (256)
T ss_pred -cccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCH--HHHHHHHHcCCcCCCCCCCCHHHHH
Confidence 1111223456799999 6999999999 8999865322 2233333333333334455666767
Q ss_pred cCcccChhchhhcCCHHHHHHHH
Q 041479 745 GGVQEGEETAEENIKKGQIRESL 767 (771)
Q Consensus 745 ~~~~cl~~~p~~Rpt~~~vl~~L 767 (771)
.+.+||..+|++|||+.|+++.|
T Consensus 233 li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 233 IMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred HHHHHhcCChhhCcCHHHHHHHh
Confidence 77899999999999999999876
No 164
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.97 E-value=1e-30 Score=280.14 Aligned_cols=225 Identities=22% Similarity=0.201 Sum_probs=187.0
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeeccch---hhHHHHHHHHHHHhccC-CCCceeEEEEeecCCCCCceeEEEEE
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLHQR---GALKSFMAECQALRNIR-HRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
-.+|.|.||.||+++.+.+++.||+|++..... ...+.+.+|+++|+++. |||||.++++|.+.+ ..++||
T Consensus 41 ~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~-----~~~lvm 115 (382)
T KOG0032|consen 41 RELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPD-----SVYLVM 115 (382)
T ss_pred hhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCC-----eEEEEE
Confidence 468999999999999999999999999965542 34578999999999998 999999999998887 789999
Q ss_pred EeccCCCCCCCc-cc-CCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCC----CceEEecccCccccCcc
Q 041479 603 EFMHHGSLESCP-RI-LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDND----MTAHMGDFGLTRFIPEV 676 (771)
Q Consensus 603 e~~~~g~L~~~~-~~-l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~----~~~kl~DfGla~~~~~~ 676 (771)
|+|.||+|.+.. +. +++.....++.|++.|+.|||+. +|+|||+||+|+|+... +.+|++|||+|......
T Consensus 116 EL~~GGeLfd~i~~~~~sE~da~~~~~~il~av~~lH~~---gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~~ 192 (382)
T KOG0032|consen 116 ELCEGGELFDRIVKKHYSERDAAGIIRQILEAVKYLHSL---GVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKPG 192 (382)
T ss_pred EecCCchHHHHHHHccCCHHHHHHHHHHHHHHHHHHHhC---CceeccCCHHHeeeccccCCCCcEEEeeCCCceEccCC
Confidence 999999998772 23 89999999999999999999995 99999999999999643 47999999999977651
Q ss_pred cCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCC--CchhhhcC
Q 041479 677 MSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALP--DQILQVLD 739 (771)
Q Consensus 677 ~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 739 (771)
......+||+.|+||| .||++|.|+.|..||.+....+ ...++..+.+. ....+.++
T Consensus 193 -----~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~-~~~~i~~~~~~f~~~~w~~is 266 (382)
T KOG0032|consen 193 -----ERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFE-IFLAILRGDFDFTSEPWDDIS 266 (382)
T ss_pred -----ceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhH-HHHHHHcCCCCCCCCCccccC
Confidence 1233568999999999 5999999999999997653333 34455555443 34444555
Q ss_pred ccccccCcccChhchhhcCCHHHHHH
Q 041479 740 PLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 740 ~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
.........|+..||.+|+|+.++++
T Consensus 267 ~~akd~i~~ll~~dp~~R~ta~~~L~ 292 (382)
T KOG0032|consen 267 ESAKDFIRKLLEFDPRKRLTAAQALQ 292 (382)
T ss_pred HHHHHHHHHhcccCcccCCCHHHHhc
Confidence 55556667999999999999999986
No 165
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1.2e-32 Score=312.59 Aligned_cols=234 Identities=26% Similarity=0.259 Sum_probs=190.2
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRAL 600 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~l 600 (771)
+.+....|.|.+|.||-|+..++|+..|||-+.... ....+...+|..++..++|||+|+++|+-...+ ..+|
T Consensus 1237 Wqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRe-----kv~I 1311 (1509)
T KOG4645|consen 1237 WQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHRE-----KVYI 1311 (1509)
T ss_pred eccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHH-----HHHH
Confidence 345567899999999999999999999999996553 344567789999999999999999999977766 6789
Q ss_pred EEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCccc
Q 041479 601 VYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVM 677 (771)
Q Consensus 601 v~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~ 677 (771)
.||||++|+|.+. .+..++.-...+..|++.|+.|||++ |||||||||+||+++.+|.+|.+|||.|..+....
T Consensus 1312 FMEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~ 1388 (1509)
T KOG4645|consen 1312 FMEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNA 1388 (1509)
T ss_pred HHHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeeecCCcEEeecccceeEecCch
Confidence 9999999999876 45567777778889999999999997 99999999999999999999999999998776543
Q ss_pred CCcccccccccccccccchh------------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcC
Q 041479 678 SSNQCSSVGLKGTVGYATPE------------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLD 739 (771)
Q Consensus 678 ~~~~~~~~~~~gt~~y~aPE------------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 739 (771)
........+..||+.||||| +|||+.||+||+.||...-..-. +..-+..+..+.+++-++
T Consensus 1389 ~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~a-IMy~V~~gh~Pq~P~~ls 1467 (1509)
T KOG4645|consen 1389 QTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWA-IMYHVAAGHKPQIPERLS 1467 (1509)
T ss_pred hcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhH-HHhHHhccCCCCCchhhh
Confidence 22333445678999999999 69999999999999976422222 333334444445555566
Q ss_pred ccccccCcccChhchhhcCCHHHHHH
Q 041479 740 PLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 740 ~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
+.=+...+.|++.||++|.++.++++
T Consensus 1468 ~~g~dFle~Cl~~dP~~Rw~~~qlle 1493 (1509)
T KOG4645|consen 1468 SEGRDFLEHCLEQDPKMRWTASQLLE 1493 (1509)
T ss_pred HhHHHHHHHHHhcCchhhhHHHHHHH
Confidence 66666777999999999999988875
No 166
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.97 E-value=1.3e-30 Score=279.59 Aligned_cols=219 Identities=26% Similarity=0.238 Sum_probs=167.9
Q ss_pred cccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHH-HHhccCCCCceeEEEEeecCCCCCceeEEEEEE
Q 041479 528 SYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQ-ALRNIRHRNLVKIITACSTSDFQGNYFRALVYE 603 (771)
Q Consensus 528 ~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~-~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e 603 (771)
.+|+|.+|+||+|++..+++.||+|++.... .....++.+|.. +++.++|||||++++++.+.+ ..|+|||
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~-----~~~lv~e 76 (321)
T cd05603 2 VIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAE-----KLYFVLD 76 (321)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCC-----EEEEEEc
Confidence 3789999999999999999999999996542 223445666654 578899999999999987766 7899999
Q ss_pred eccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCc
Q 041479 604 FMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSN 680 (771)
Q Consensus 604 ~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 680 (771)
|+++|+|... ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 77 ~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~--- 150 (321)
T cd05603 77 YVNGGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPE--- 150 (321)
T ss_pred CCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEccCCCCccCCCCC---
Confidence 9999999654 34578888899999999999999985 89999999999999999999999999987532211
Q ss_pred ccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCcccccc
Q 041479 681 QCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFLVG 745 (771)
Q Consensus 681 ~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 745 (771)
......+||+.|+||| +||++|||++|+.||.+... ..+.+.... .+...+...+..+...
T Consensus 151 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~--~~~~~~i~~-~~~~~~~~~~~~~~~l 226 (321)
T cd05603 151 -ETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDV--SQMYDNILH-KPLQLPGGKTVAACDL 226 (321)
T ss_pred -CccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCH--HHHHHHHhc-CCCCCCCCCCHHHHHH
Confidence 1123356899999999 69999999999999965311 111121111 1222233334445556
Q ss_pred CcccChhchhhcCCHH
Q 041479 746 GVQEGEETAEENIKKG 761 (771)
Q Consensus 746 ~~~cl~~~p~~Rpt~~ 761 (771)
..+|++.||++||++.
T Consensus 227 i~~~l~~~p~~R~~~~ 242 (321)
T cd05603 227 LVGLLHKDQRRRLGAK 242 (321)
T ss_pred HHHHccCCHhhcCCCC
Confidence 6699999999999764
No 167
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.97 E-value=3e-30 Score=271.03 Aligned_cols=225 Identities=24% Similarity=0.276 Sum_probs=177.6
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeeccc-hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEec
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFM 605 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~~ 605 (771)
..+|+|.+|+||+|++..+++.||+|++.... ....+++.+|++++++++||||+++++++...+ ..++||||+
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~~lv~e~~ 81 (279)
T cd06619 7 EILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVEN-----RISICTEFM 81 (279)
T ss_pred eeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECC-----EEEEEEecC
Confidence 45799999999999998888899999986542 334567999999999999999999999998876 679999999
Q ss_pred cCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCcccccc
Q 041479 606 HHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSV 685 (771)
Q Consensus 606 ~~g~L~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~ 685 (771)
++|++..+ ..+++..+..++.|++.|++|||+. +|+|+||||+||+++.++.+||+|||++....... ..
T Consensus 82 ~~~~l~~~-~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~------~~ 151 (279)
T cd06619 82 DGGSLDVY-RKIPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSI------AK 151 (279)
T ss_pred CCCChHHh-hcCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEEECCCCCEEEeeCCcceeccccc------cc
Confidence 99998654 3468888899999999999999985 99999999999999999999999999997553321 12
Q ss_pred cccccccccchh---------------HHHHHHHHHhCCCCCCccccCCc-----cHHHHHHhhCCCc-hhhhcCccccc
Q 041479 686 GLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGL-----DLHNFVKMALPDQ-ILQVLDPLFLV 744 (771)
Q Consensus 686 ~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~-----~~~~~~~~~~~~~-~~~~~~~~~~~ 744 (771)
...||..|+||| +||++|||++|+.||........ ...+......+.. .....++.+..
T Consensus 152 ~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (279)
T cd06619 152 TYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVH 231 (279)
T ss_pred CCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCCcCCHHHHH
Confidence 346899999999 69999999999999965322111 1111111111111 12234455556
Q ss_pred cCcccChhchhhcCCHHHHHHH
Q 041479 745 GGVQEGEETAEENIKKGQIRES 766 (771)
Q Consensus 745 ~~~~cl~~~p~~Rpt~~~vl~~ 766 (771)
...+|++.+|++||++.|+++.
T Consensus 232 li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 232 FITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred HHHHHhhCChhhCCCHHHHhcC
Confidence 6779999999999999999753
No 168
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.97 E-value=2.3e-30 Score=270.48 Aligned_cols=229 Identities=23% Similarity=0.275 Sum_probs=170.5
Q ss_pred cccccccceEEEEEecC--CCeEEEEEEeeccc-hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEe
Q 041479 528 SYESLVKATVYKGILDL--DQTFIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEF 604 (771)
Q Consensus 528 ~l~~~~~~~Vy~~~~~~--~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~ 604 (771)
.+|+|.+|.||+|.+.. +...||+|.++... ......+.+|+.++++++||||+++++++.+.. ..++||||
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~~lv~e~ 76 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVT-----PYLLVMEF 76 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC-----CcEEEEEC
Confidence 37999999999998654 34579999986543 233457899999999999999999999987765 57999999
Q ss_pred ccCCCCCCCc--------ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcc
Q 041479 605 MHHGSLESCP--------RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676 (771)
Q Consensus 605 ~~~g~L~~~~--------~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~ 676 (771)
+++|+|.++. ...++..+..++.|++.|++|||+. +++||||||+||+++.++.+|++|||+++.....
T Consensus 77 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~ 153 (269)
T cd05087 77 CPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKE 153 (269)
T ss_pred CCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEECCccccccccCc
Confidence 9999997652 1345667788999999999999985 8999999999999999999999999999754322
Q ss_pred cCCcccccccccccccccchh----------------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHh-hC--
Q 041479 677 MSSNQCSSVGLKGTVGYATPE----------------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKM-AL-- 730 (771)
Q Consensus 677 ~~~~~~~~~~~~gt~~y~aPE----------------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~-~~-- 730 (771)
.. ........|+..|+||| +|+++||+++ |+.||........ ....... ..
T Consensus 154 ~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~-~~~~~~~~~~~~ 230 (269)
T cd05087 154 DY--YVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQV-LTYTVREQQLKL 230 (269)
T ss_pred ce--eecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHH-HHHHhhcccCCC
Confidence 21 11122345788899999 4999999997 9999965322211 1111111 11
Q ss_pred C-CchhhhcCccccccCcccChhchhhcCCHHHHHHHHH
Q 041479 731 P-DQILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLI 768 (771)
Q Consensus 731 ~-~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~ 768 (771)
+ +.........+...+.+|| .+|++|||+.||++.|+
T Consensus 231 ~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 231 PKPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred CCCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 1 1122223333444566898 68999999999999875
No 169
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.97 E-value=3.4e-30 Score=267.71 Aligned_cols=230 Identities=24% Similarity=0.337 Sum_probs=179.4
Q ss_pred cccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEE
Q 041479 524 LLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYE 603 (771)
Q Consensus 524 ~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e 603 (771)
.....+|+|.+|+||+|.+..+. .||+|.+.... ...+.+.+|++++++++||||+++++++.. + ..++|||
T Consensus 9 ~~~~~ig~g~~~~v~~~~~~~~~-~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~-----~~~~v~e 80 (260)
T cd05069 9 RLDVKLGQGCFGEVWMGTWNGTT-KVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVSE-E-----PIYIVTE 80 (260)
T ss_pred eeeeeecCcCCCeEEEEEEcCCc-eEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEcC-C-----CcEEEEE
Confidence 34456899999999999987765 79999885433 234678999999999999999999998743 2 4689999
Q ss_pred eccCCCCCCC-----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccC
Q 041479 604 FMHHGSLESC-----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMS 678 (771)
Q Consensus 604 ~~~~g~L~~~-----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 678 (771)
|+++|+|.++ ...+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.......
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~ 157 (260)
T cd05069 81 FMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEY 157 (260)
T ss_pred cCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCeEEECCCccceEccCCcc
Confidence 9999999765 22478889999999999999999985 899999999999999999999999999976543221
Q ss_pred Ccccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhhhcCccc
Q 041479 679 SNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLF 742 (771)
Q Consensus 679 ~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 742 (771)
.......++..|+||| +||++||++| |+.||.+.... ...+......+.......+..+
T Consensus 158 ---~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 232 (260)
T cd05069 158 ---TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNR--EVLEQVERGYRMPCPQGCPESL 232 (260)
T ss_pred ---cccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCCCCCCCcccCHHH
Confidence 1112234677899999 6999999999 99999764322 2233333333333333445555
Q ss_pred cccCcccChhchhhcCCHHHHHHHHHH
Q 041479 743 LVGGVQEGEETAEENIKKGQIRESLIA 769 (771)
Q Consensus 743 ~~~~~~cl~~~p~~Rpt~~~vl~~L~~ 769 (771)
.....+||.+||++||++.++++.|++
T Consensus 233 ~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 233 HELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred HHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 566779999999999999999999986
No 170
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.97 E-value=1.1e-30 Score=280.58 Aligned_cols=222 Identities=27% Similarity=0.222 Sum_probs=169.4
Q ss_pred cccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHH-HHhccCCCCceeEEEEeecCCCCCceeEEEEEE
Q 041479 528 SYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQ-ALRNIRHRNLVKIITACSTSDFQGNYFRALVYE 603 (771)
Q Consensus 528 ~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~-~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e 603 (771)
.+|+|.+|+||+|+.+.+++.||||++.... ....+.+..|.. +++.++||||+++++++...+ ..|+|||
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~-----~~~lv~e 76 (325)
T cd05604 2 VIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTE-----KLYFVLD 76 (325)
T ss_pred ceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCC-----EEEEEEc
Confidence 3799999999999999999999999996542 233455666665 467799999999999988776 7899999
Q ss_pred eccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCc
Q 041479 604 FMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSN 680 (771)
Q Consensus 604 ~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 680 (771)
|+++|+|... ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 77 ~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~--- 150 (325)
T cd05604 77 FVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQS--- 150 (325)
T ss_pred CCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEeecCCcccCCCCC---
Confidence 9999999655 34688999999999999999999985 99999999999999999999999999987432211
Q ss_pred ccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCcccccc
Q 041479 681 QCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFLVG 745 (771)
Q Consensus 681 ~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 745 (771)
......+||+.||||| +||++|||++|+.||.+.... .......... .......+..+...
T Consensus 151 -~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~l 226 (325)
T cd05604 151 -DTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVA-EMYDNILHKP--LVLRPGASLTAWSI 226 (325)
T ss_pred -CCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHH-HHHHHHHcCC--ccCCCCCCHHHHHH
Confidence 1123456999999999 699999999999999642111 1111222111 11122234444455
Q ss_pred CcccChhchhhcCCHHHHH
Q 041479 746 GVQEGEETAEENIKKGQIR 764 (771)
Q Consensus 746 ~~~cl~~~p~~Rpt~~~vl 764 (771)
..+|++.+|++||++++.+
T Consensus 227 l~~ll~~~p~~R~~~~~~~ 245 (325)
T cd05604 227 LEELLEKDRQRRLGAKEDF 245 (325)
T ss_pred HHHHhccCHHhcCCCCCCH
Confidence 6699999999999886443
No 171
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.97 E-value=1.6e-30 Score=275.58 Aligned_cols=229 Identities=21% Similarity=0.231 Sum_probs=181.5
Q ss_pred cccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEE
Q 041479 524 LLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYE 603 (771)
Q Consensus 524 ~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e 603 (771)
.....+|+|.+|+||+|+...+++.||+|.+........+.+.+|+.+++.++||||+++++++...+ ..|+|||
T Consensus 22 ~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-----~~~lv~e 96 (297)
T cd06656 22 TRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGD-----ELWVVME 96 (297)
T ss_pred eeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCC-----EEEEeec
Confidence 34456899999999999998888899999997665555678899999999999999999999998766 7899999
Q ss_pred eccCCCCCCC--cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCcc
Q 041479 604 FMHHGSLESC--PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQ 681 (771)
Q Consensus 604 ~~~~g~L~~~--~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 681 (771)
|+++++|.++ ...+++.++..++.|++.||.|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 97 ~~~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~--- 170 (297)
T cd06656 97 YLAGGSLTDVVTETCMDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS--- 170 (297)
T ss_pred ccCCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEECcCccceEccCCcc---
Confidence 9999999876 34578889999999999999999985 899999999999999999999999999876543221
Q ss_pred cccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCC-CchhhhcCcccccc
Q 041479 682 CSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALP-DQILQVLDPLFLVG 745 (771)
Q Consensus 682 ~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 745 (771)
......|++.|+||| +||++|++++|+.||.......... .......+ ...+..++..+...
T Consensus 171 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l 248 (297)
T cd06656 171 -KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALY-LIATNGTPELQNPERLSAVFRDF 248 (297)
T ss_pred -CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchhee-eeccCCCCCCCCccccCHHHHHH
Confidence 112345889999999 6999999999999996532211111 11111111 12233344455556
Q ss_pred CcccChhchhhcCCHHHHHH
Q 041479 746 GVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 746 ~~~cl~~~p~~Rpt~~~vl~ 765 (771)
..+||..+|++||++.++++
T Consensus 249 i~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 249 LNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred HHHHccCChhhCcCHHHHhc
Confidence 67999999999999999986
No 172
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.97 E-value=2.1e-30 Score=270.69 Aligned_cols=229 Identities=23% Similarity=0.239 Sum_probs=169.4
Q ss_pred cccccccceEEEEEecC--CCeEEEEEEeeccc-hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEe
Q 041479 528 SYESLVKATVYKGILDL--DQTFIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEF 604 (771)
Q Consensus 528 ~l~~~~~~~Vy~~~~~~--~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~ 604 (771)
.+|+|.+|+||+|.... ....||+|.+.... ......|.+|+++++.++||||+++++++.+.. ..++||||
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~-----~~~lv~e~ 76 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESI-----PYLLVLEF 76 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCC-----ceEEEEEe
Confidence 47999999999997644 33578899875443 334567899999999999999999999987765 67999999
Q ss_pred ccCCCCCCCc--------ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcc
Q 041479 605 MHHGSLESCP--------RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676 (771)
Q Consensus 605 ~~~g~L~~~~--------~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~ 676 (771)
+++|+|.++. ...++.....++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 77 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~ 153 (269)
T cd05042 77 CPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQLTADLSVKIGDYGLALEQYPE 153 (269)
T ss_pred CCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheEecCCCcEEEeccccccccccc
Confidence 9999997651 2245677889999999999999985 8999999999999999999999999998754322
Q ss_pred cCCcccccccccccccccchh----------------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhC---
Q 041479 677 MSSNQCSSVGLKGTVGYATPE----------------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMAL--- 730 (771)
Q Consensus 677 ~~~~~~~~~~~~gt~~y~aPE----------------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~--- 730 (771)
... .......+++.|+||| +||++|||++ |..||.+..... .+........
T Consensus 154 ~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~-~~~~~~~~~~~~~ 230 (269)
T cd05042 154 DYY--ITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQ-VLKQVVREQDIKL 230 (269)
T ss_pred hhe--eccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHH-HHHHHhhccCccC
Confidence 111 1112234677899999 5999999999 788886542211 1222222211
Q ss_pred C-CchhhhcCccccccCcccChhchhhcCCHHHHHHHHH
Q 041479 731 P-DQILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLI 768 (771)
Q Consensus 731 ~-~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~ 768 (771)
+ +.....+++.+......|| .||++|||+++|++.|.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l~ 268 (269)
T cd05042 231 PKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHELLT 268 (269)
T ss_pred CCCcccccCCHHHHHHHHHHh-cCcccccCHHHHHHHhc
Confidence 1 1222333444444555787 59999999999999874
No 173
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=99.97 E-value=1.6e-30 Score=285.34 Aligned_cols=230 Identities=19% Similarity=0.158 Sum_probs=172.3
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEE
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
...+|+|.+|+||+++.+.+++.||||++.... ....+.+.+|++++++++|||||++++++.+.+ ..|+||
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~-----~~~lv~ 80 (377)
T cd05629 6 VKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQ-----YLYLIM 80 (377)
T ss_pred eEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-----eeEEEE
Confidence 345899999999999999999999999986532 334567889999999999999999999988776 789999
Q ss_pred EeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCC
Q 041479 603 EFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSS 679 (771)
Q Consensus 603 e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 679 (771)
||+++|+|.++ .+.+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+|++|||+++........
T Consensus 81 E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~ 157 (377)
T cd05629 81 EFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDS 157 (377)
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEEeeccccccccccccc
Confidence 99999999765 34678888899999999999999985 9999999999999999999999999999643211000
Q ss_pred c-----------c--------------------------------cccccccccccccchh---------------HHHH
Q 041479 680 N-----------Q--------------------------------CSSVGLKGTVGYATPE---------------YGIL 701 (771)
Q Consensus 680 ~-----------~--------------------------------~~~~~~~gt~~y~aPE---------------~Gv~ 701 (771)
. . ......+||+.|+||| +||+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvi 237 (377)
T cd05629 158 AYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLGAI 237 (377)
T ss_pred ccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecchh
Confidence 0 0 0001246999999999 6999
Q ss_pred HHHHHhCCCCCCccccCCccHHHHHHhhCCCchh--hhcCccccccCcccChhchhhc---CCHHHHHH
Q 041479 702 LLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQIL--QVLDPLFLVGGVQEGEETAEEN---IKKGQIRE 765 (771)
Q Consensus 702 l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~cl~~~p~~R---pt~~~vl~ 765 (771)
+|||++|+.||.+..... .+............+ ..+++.+.....+|+. +|.+| +|+.|+++
T Consensus 238 l~elltG~~Pf~~~~~~~-~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~ 304 (377)
T cd05629 238 MFECLIGWPPFCSENSHE-TYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKS 304 (377)
T ss_pred hhhhhcCCCCCCCCCHHH-HHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhc
Confidence 999999999996532211 112222111111111 1234444455557886 67765 59988875
No 174
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.97 E-value=3.5e-30 Score=267.34 Aligned_cols=229 Identities=26% Similarity=0.371 Sum_probs=185.5
Q ss_pred cccccccceEEEEEecCC---CeEEEEEEeeccchh-hHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEE
Q 041479 528 SYESLVKATVYKGILDLD---QTFIAVKVLFLHQRG-ALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYE 603 (771)
Q Consensus 528 ~l~~~~~~~Vy~~~~~~~---~~~vAvK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e 603 (771)
.+|+|.+|.||+|..... +..||||.+...... ..+++.+|+++++.++|+||+++++++.+.. ..++|||
T Consensus 2 ~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-----~~~lv~e 76 (262)
T cd00192 2 KLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEE-----PLYLVLE 76 (262)
T ss_pred ccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCC-----ceEEEEE
Confidence 478999999999999875 779999999755432 3678999999999999999999999988755 6799999
Q ss_pred eccCCCCCCC---c---------ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCcc
Q 041479 604 FMHHGSLESC---P---------RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTR 671 (771)
Q Consensus 604 ~~~~g~L~~~---~---------~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~ 671 (771)
|+++|+|.++ . ..+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+|++|||.++
T Consensus 77 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~nili~~~~~~~l~dfg~~~ 153 (262)
T cd00192 77 YMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDLAARNCLVGEDLVVKISDFGLSR 153 (262)
T ss_pred eccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCccCcceEEECCCCcEEEccccccc
Confidence 9999999765 2 5578999999999999999999985 99999999999999999999999999998
Q ss_pred ccCcccCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchh
Q 041479 672 FIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQIL 735 (771)
Q Consensus 672 ~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~ 735 (771)
....... ........+++.|+||| +|+++||+++ |+.||.+.. ...+.+..........+
T Consensus 154 ~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~--~~~~~~~~~~~~~~~~~ 229 (262)
T cd00192 154 DVYDDDY--YRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLS--NEEVLEYLRKGYRLPKP 229 (262)
T ss_pred ccccccc--cccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCC--HHHHHHHHHcCCCCCCC
Confidence 7654332 11223345788999999 6999999999 699997652 22233333333333344
Q ss_pred hhcCccccccCcccChhchhhcCCHHHHHHHHH
Q 041479 736 QVLDPLFLVGGVQEGEETAEENIKKGQIRESLI 768 (771)
Q Consensus 736 ~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~ 768 (771)
..+++.+.....+|+..+|++|||+.|+++.|+
T Consensus 230 ~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 230 EYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred ccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 455666667777999999999999999999874
No 175
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.97 E-value=3.9e-30 Score=267.61 Aligned_cols=230 Identities=24% Similarity=0.334 Sum_probs=178.9
Q ss_pred ccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEe
Q 041479 525 LNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEF 604 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~ 604 (771)
....+|+|.+|+||+|++..+. .||+|++.... ...++|.+|++++++++||||+++++++.+. ..++||||
T Consensus 10 ~~~~lg~g~~~~v~~~~~~~~~-~valK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~------~~~lv~e~ 81 (262)
T cd05071 10 LEVKLGQGCFGEVWMGTWNGTT-RVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE------PIYIVTEY 81 (262)
T ss_pred EeeecCCCCCCcEEEEEecCCc-eEEEEecccCc-cCHHHHHHHHHHHHhCCCCCcceEEEEECCC------CcEEEEEc
Confidence 3445899999999999987665 79999996432 2346799999999999999999999986433 46899999
Q ss_pred ccCCCCCCCc-----ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCC
Q 041479 605 MHHGSLESCP-----RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSS 679 (771)
Q Consensus 605 ~~~g~L~~~~-----~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 679 (771)
+++|+|.++. ..+++..+..++.|++.||+|+|+. +|+||||||+||++++++.+||+|||.++.......
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~- 157 (262)
T cd05071 82 MSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY- 157 (262)
T ss_pred CCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcccEEEcCCCcEEeccCCceeecccccc-
Confidence 9999997662 3478889999999999999999985 899999999999999999999999999986543321
Q ss_pred cccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhhhcCcccc
Q 041479 680 NQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFL 743 (771)
Q Consensus 680 ~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 743 (771)
.......++..|+||| +|+++||++| |+.||.+..... ..+......+......++..+.
T Consensus 158 --~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~ 233 (262)
T cd05071 158 --TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNRE--VLDQVERGYRMPCPPECPESLH 233 (262)
T ss_pred --ccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHH--HHHHHhcCCCCCCccccCHHHH
Confidence 1112234677899999 6999999999 888986543221 2222222222222334455566
Q ss_pred ccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 744 VGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 744 ~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
....+|++++|++|||+.++++.|++.
T Consensus 234 ~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 234 DLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred HHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 677799999999999999999999975
No 176
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.97 E-value=3.5e-30 Score=267.60 Aligned_cols=229 Identities=25% Similarity=0.327 Sum_probs=179.2
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEec
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFM 605 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~~ 605 (771)
...+|+|.+|+||+|..+.+. .||+|.+..... ..+++.+|++++++++||||+++++++... ..+++|||+
T Consensus 11 ~~~ig~g~~~~v~~~~~~~~~-~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~------~~~lv~e~~ 82 (260)
T cd05070 11 IKKLGNGQFGEVWMGTWNGNT-KVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVSEE------PIYIVTEYM 82 (260)
T ss_pred hheeccccCceEEEEEecCCc-eeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEECCC------CcEEEEEec
Confidence 345899999999999887554 799999865433 346799999999999999999999987432 368999999
Q ss_pred cCCCCCCC-----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCc
Q 041479 606 HHGSLESC-----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSN 680 (771)
Q Consensus 606 ~~g~L~~~-----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 680 (771)
++++|.++ ...+++.++..++.|++.|++|||+. +|+||||||+||++++++.+|++|||+++.......
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~-- 157 (260)
T cd05070 83 SKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEY-- 157 (260)
T ss_pred CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEeCCceEEeCCceeeeeccCccc--
Confidence 99999765 23478999999999999999999985 899999999999999999999999999986543221
Q ss_pred ccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhhhcCccccc
Q 041479 681 QCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFLV 744 (771)
Q Consensus 681 ~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 744 (771)
....+..++..|+||| ||+++||+++ |+.||.+... ....+......+...+...+..+..
T Consensus 158 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (260)
T cd05070 158 -TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNN--REVLEQVERGYRMPCPQDCPISLHE 234 (260)
T ss_pred -ccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCH--HHHHHHHHcCCCCCCCCcCCHHHHH
Confidence 1112233567899999 6999999999 8999976422 2233333333333334444555666
Q ss_pred cCcccChhchhhcCCHHHHHHHHHHh
Q 041479 745 GGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 745 ~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
...+|+.++|++|||++++.+.|++.
T Consensus 235 li~~~l~~~p~~Rpt~~~l~~~l~~~ 260 (260)
T cd05070 235 LMLQCWKKDPEERPTFEYLQSFLEDY 260 (260)
T ss_pred HHHHHcccCcccCcCHHHHHHHHhcC
Confidence 77799999999999999999999863
No 177
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.97 E-value=2.2e-30 Score=274.38 Aligned_cols=228 Identities=22% Similarity=0.271 Sum_probs=181.9
Q ss_pred ccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEe
Q 041479 525 LNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEF 604 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~ 604 (771)
....+|.|.+|+||+|+...+++.||+|.+........+.+.+|+.+++.++||||+++++++...+ ..|+||||
T Consensus 23 ~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-----~~~lv~e~ 97 (296)
T cd06655 23 RYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGD-----ELFVVMEY 97 (296)
T ss_pred EEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCc-----eEEEEEEe
Confidence 3445899999999999998888999999997665555678899999999999999999999987766 78999999
Q ss_pred ccCCCCCCC--cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCccc
Q 041479 605 MHHGSLESC--PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQC 682 (771)
Q Consensus 605 ~~~g~L~~~--~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 682 (771)
+++++|..+ ...+++.++..++.|++.|++|||+. +++||||||+||+++.++.+||+|||++........
T Consensus 98 ~~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~---- 170 (296)
T cd06655 98 LAGGSLTDVVTETCMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQS---- 170 (296)
T ss_pred cCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccchhcccccc----
Confidence 999999776 33588999999999999999999986 999999999999999999999999999876543221
Q ss_pred ccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCC-CchhhhcCccccccC
Q 041479 683 SSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALP-DQILQVLDPLFLVGG 746 (771)
Q Consensus 683 ~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 746 (771)
......|+..|+||| +||++||+++|+.||.+..... ..........+ ...+..+++.+....
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li 249 (296)
T cd06655 171 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR-ALYLIATNGTPELQNPEKLSPIFRDFL 249 (296)
T ss_pred cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHhcCCcccCCcccCCHHHHHHH
Confidence 112345889999999 6999999999999996532211 11122211111 122333455555666
Q ss_pred cccChhchhhcCCHHHHHH
Q 041479 747 VQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 747 ~~cl~~~p~~Rpt~~~vl~ 765 (771)
.+||..||++|||+.++++
T Consensus 250 ~~~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 250 NRCLEMDVEKRGSAKELLQ 268 (296)
T ss_pred HHHhhcChhhCCCHHHHhh
Confidence 7999999999999999984
No 178
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.97 E-value=3.4e-30 Score=276.53 Aligned_cols=220 Identities=19% Similarity=0.178 Sum_probs=172.3
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhcc-CCCCceeEEEEeecCCCCCceeEEEE
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNI-RHRNLVKIITACSTSDFQGNYFRALV 601 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~~~~lv 601 (771)
...+|+|.+|+||+|+.+.+++.||||++.... ....+.+..|..++..+ +|++|+++++++.+.+ ..|+|
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~-----~~~lv 79 (323)
T cd05616 5 LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMD-----RLYFV 79 (323)
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCC-----EEEEE
Confidence 345899999999999999998999999997542 23445677888888887 5899999999987766 78999
Q ss_pred EEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccC
Q 041479 602 YEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMS 678 (771)
Q Consensus 602 ~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 678 (771)
|||+++|+|... ...+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 80 ~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~- 155 (323)
T cd05616 80 MEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDG- 155 (323)
T ss_pred EcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeEECCCCcEEEccCCCceecCCCC-
Confidence 999999999765 34688899999999999999999985 99999999999999999999999999997533211
Q ss_pred Ccccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCcccc
Q 041479 679 SNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFL 743 (771)
Q Consensus 679 ~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 743 (771)
......+||+.|+||| +||++|||++|+.||.+.... .....+.... ...+..+++.+.
T Consensus 156 ---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~-~~~~~i~~~~--~~~p~~~s~~~~ 229 (323)
T cd05616 156 ---VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED-ELFQSIMEHN--VAYPKSMSKEAV 229 (323)
T ss_pred ---CccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHH-HHHHHHHhCC--CCCCCcCCHHHH
Confidence 1122356999999999 699999999999999753221 1122222221 122334555555
Q ss_pred ccCcccChhchhhcCCH
Q 041479 744 VGGVQEGEETAEENIKK 760 (771)
Q Consensus 744 ~~~~~cl~~~p~~Rpt~ 760 (771)
....+|++.||++|++.
T Consensus 230 ~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 230 AICKGLMTKHPGKRLGC 246 (323)
T ss_pred HHHHHHcccCHHhcCCC
Confidence 66779999999999985
No 179
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.97 E-value=4e-30 Score=267.48 Aligned_cols=234 Identities=20% Similarity=0.228 Sum_probs=183.4
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccc-----hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCcee
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ-----RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYF 597 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~-----~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 597 (771)
+.....+|+|.+|.||+|....+++.||+|.+.... ....+.+.+|++++++++||||+++++++.+.+ .
T Consensus 4 ~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-----~ 78 (263)
T cd06625 4 WRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDE-----T 78 (263)
T ss_pred ccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCC-----e
Confidence 334567899999999999998888899999986432 223467899999999999999999999988776 7
Q ss_pred EEEEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccC
Q 041479 598 RALVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIP 674 (771)
Q Consensus 598 ~~lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~ 674 (771)
.++||||+++++|.+. ...+++..+..++.|++.|+.|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 79 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~ 155 (263)
T cd06625 79 LSIFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRLQ 155 (263)
T ss_pred EEEEEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecc
Confidence 8999999999999765 34578888999999999999999985 99999999999999999999999999997654
Q ss_pred cccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcC
Q 041479 675 EVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLD 739 (771)
Q Consensus 675 ~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 739 (771)
..... ........|+..|+||| +|+++||+++|+.||.+.... ...............+..++
T Consensus 156 ~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 233 (263)
T cd06625 156 TICSS-GTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAM-AAIFKIATQPTNPQLPSHVS 233 (263)
T ss_pred ccccc-cccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchH-HHHHHHhccCCCCCCCccCC
Confidence 32111 11112345788999999 699999999999998653211 11222222222334455566
Q ss_pred ccccccCcccChhchhhcCCHHHHHHH
Q 041479 740 PLFLVGGVQEGEETAEENIKKGQIRES 766 (771)
Q Consensus 740 ~~~~~~~~~cl~~~p~~Rpt~~~vl~~ 766 (771)
..+.....+||..+|++|||+.++++.
T Consensus 234 ~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 234 PDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred HHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 666667779999999999999999864
No 180
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.97 E-value=2.3e-30 Score=272.06 Aligned_cols=230 Identities=22% Similarity=0.260 Sum_probs=183.9
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
+.....+|+|.+|+||+|.+..+++.||+|++........++|.+|++++++++||||+++++++.+.. ..|+||
T Consensus 7 ~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~lv~ 81 (280)
T cd06611 7 WEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYEN-----KLWILI 81 (280)
T ss_pred HHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCC-----eEEEEe
Confidence 334456899999999999998888899999998776666788999999999999999999999988766 689999
Q ss_pred EeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccC
Q 041479 603 EFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMS 678 (771)
Q Consensus 603 e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 678 (771)
||+++|+|..+ ...+++..+..++.|++.|+.|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 82 e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~ 158 (280)
T cd06611 82 EFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQ 158 (280)
T ss_pred eccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEECCCCCEEEccCccchhhccccc
Confidence 99999999766 34588999999999999999999986 899999999999999999999999999875433211
Q ss_pred Ccccccccccccccccchh--------------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCC-Cchhhh
Q 041479 679 SNQCSSVGLKGTVGYATPE--------------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALP-DQILQV 737 (771)
Q Consensus 679 ~~~~~~~~~~gt~~y~aPE--------------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~ 737 (771)
......|++.|+||| +|+++||+++|+.||.+.... .....+.....+ ...+..
T Consensus 159 ----~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~ 233 (280)
T cd06611 159 ----KRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPM-RVLLKILKSEPPTLDQPSK 233 (280)
T ss_pred ----ccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHH-HHHHHHhcCCCCCcCCccc
Confidence 122346899999999 699999999999999753211 112223222222 122334
Q ss_pred cCccccccCcccChhchhhcCCHHHHHH
Q 041479 738 LDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 738 ~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
++..+.....+||..+|++||++.++++
T Consensus 234 ~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (280)
T cd06611 234 WSSSFNDFLKSCLVKDPDDRPTAAELLK 261 (280)
T ss_pred CCHHHHHHHHHHhccChhhCcCHHHHhc
Confidence 4555666677999999999999999985
No 181
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.97 E-value=3.1e-30 Score=273.56 Aligned_cols=231 Identities=23% Similarity=0.286 Sum_probs=178.8
Q ss_pred cccccccccceEEEEEecCCCe--EEEEEEeecc-chhhHHHHHHHHHHHhcc-CCCCceeEEEEeecCCCCCceeEEEE
Q 041479 526 NVSYESLVKATVYKGILDLDQT--FIAVKVLFLH-QRGALKSFMAECQALRNI-RHRNLVKIITACSTSDFQGNYFRALV 601 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~--~vAvK~~~~~-~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~~~~lv 601 (771)
...+|+|++|.||+|+.+.++. .+|+|.++.. .....+.+.+|+++++++ +||||+++++++.+.+ ..|+|
T Consensus 7 ~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~-----~~~lv 81 (297)
T cd05089 7 EDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRG-----YLYIA 81 (297)
T ss_pred eeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCC-----cceEE
Confidence 4468999999999999877653 4788888643 334457899999999999 7999999999987765 67999
Q ss_pred EEeccCCCCCCCc-------------------ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCce
Q 041479 602 YEFMHHGSLESCP-------------------RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTA 662 (771)
Q Consensus 602 ~e~~~~g~L~~~~-------------------~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~ 662 (771)
|||+++|+|.++. ..+++..+..++.|++.|++|||+. +|+||||||+||++++++.+
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~ 158 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFIHRDLAARNVLVGENLAS 158 (297)
T ss_pred EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCcCCcceEEECCCCeE
Confidence 9999999986541 2477889999999999999999985 99999999999999999999
Q ss_pred EEecccCccccCcccCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHH
Q 041479 663 HMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFV 726 (771)
Q Consensus 663 kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~ 726 (771)
||+|||++........ ......+..|+||| |||++|||++ |..||.+.... ...+..
T Consensus 159 kl~dfg~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~--~~~~~~ 231 (297)
T cd05089 159 KIADFGLSRGEEVYVK-----KTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCA--ELYEKL 231 (297)
T ss_pred EECCcCCCccccceec-----cCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHH
Confidence 9999999864321110 11112355799999 6999999998 99999754321 122222
Q ss_pred HhhCCCchhhhcCccccccCcccChhchhhcCCHHHHHHHHHHhC
Q 041479 727 KMALPDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAIL 771 (771)
Q Consensus 727 ~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~l 771 (771)
........+..++..+.....+||..+|++|||+.++++.|++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~ 276 (297)
T cd05089 232 PQGYRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRML 276 (297)
T ss_pred hcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 222222334445666667777999999999999999999998763
No 182
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.97 E-value=3.2e-30 Score=270.00 Aligned_cols=220 Identities=20% Similarity=0.275 Sum_probs=170.1
Q ss_pred cccccccceEEEEEecCC------------------------CeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeE
Q 041479 528 SYESLVKATVYKGILDLD------------------------QTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKI 583 (771)
Q Consensus 528 ~l~~~~~~~Vy~~~~~~~------------------------~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l 583 (771)
.+|+|.+|.||+|.+..+ ...||+|++..........|.+|++++++++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 379999999999986322 23689999876555556789999999999999999999
Q ss_pred EEEeecCCCCCceeEEEEEEeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCC
Q 041479 584 ITACSTSDFQGNYFRALVYEFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDND 659 (771)
Q Consensus 584 ~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~ 659 (771)
++++.+.. ..++||||+++|+|..+ ...+++..+..++.|+++||+|||+. +|+||||||+||+++..
T Consensus 82 ~~~~~~~~-----~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~Nill~~~ 153 (274)
T cd05076 82 HGVCVRGS-----ENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDK---NLVHGNVCAKNILLARL 153 (274)
T ss_pred EEEEEeCC-----ceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcC---CccCCCCCcccEEEecc
Confidence 99998776 67999999999999765 34578899999999999999999985 89999999999999754
Q ss_pred C-------ceEEecccCccccCcccCCcccccccccccccccchh----------------HHHHHHHHH-hCCCCCCcc
Q 041479 660 M-------TAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE----------------YGILLLEIF-TGKRPTSDM 715 (771)
Q Consensus 660 ~-------~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~-tg~~P~~~~ 715 (771)
+ .+|++|||++...... ....++..|+||| |||++||++ +|+.||.+.
T Consensus 154 ~~~~~~~~~~kl~d~g~~~~~~~~--------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~ 225 (274)
T cd05076 154 GLAEGTSPFIKLSDPGVSFTALSR--------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKER 225 (274)
T ss_pred CcccCccceeeecCCccccccccc--------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCcccc
Confidence 3 4899999988643221 1124678899999 699999995 699998654
Q ss_pred ccCCccHHHHHHhhCCCchhhhcCccccccCcccChhchhhcCCHHHHHHHH
Q 041479 716 FTEGLDLHNFVKMALPDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRESL 767 (771)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L 767 (771)
.... ...+..... ..+....+.+...+.+||+.+|++|||+.++++.|
T Consensus 226 ~~~~--~~~~~~~~~--~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L 273 (274)
T cd05076 226 TPSE--KERFYEKKH--RLPEPSCKELATLISQCLTYEPTQRPSFRTILRDL 273 (274)
T ss_pred ChHH--HHHHHHhcc--CCCCCCChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence 2211 222222221 12222334555667799999999999999999887
No 183
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.97 E-value=5.5e-30 Score=268.78 Aligned_cols=232 Identities=23% Similarity=0.234 Sum_probs=178.6
Q ss_pred cccccccccceEEEEEecC-----CCeEEEEEEeeccc-hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEE
Q 041479 526 NVSYESLVKATVYKGILDL-----DQTFIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRA 599 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~-----~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 599 (771)
...+|+|.+|.||+|.+.. .+..||+|.+.... ......|.+|+.++++++|+||+++++++.+.+ ..+
T Consensus 11 ~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-----~~~ 85 (277)
T cd05036 11 LRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERL-----PRF 85 (277)
T ss_pred eeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCC-----CcE
Confidence 4468999999999999987 66789999886443 334567999999999999999999999987765 568
Q ss_pred EEEEeccCCCCCCCc----------ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCC---ceEEec
Q 041479 600 LVYEFMHHGSLESCP----------RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDM---TAHMGD 666 (771)
Q Consensus 600 lv~e~~~~g~L~~~~----------~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~---~~kl~D 666 (771)
+||||+++|+|.++. ..+++.++..++.|++.|++|||+. +++||||||+||+++.++ .+|++|
T Consensus 86 lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~nil~~~~~~~~~~kl~d 162 (277)
T cd05036 86 ILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARNCLLTCKGPGRVAKIAD 162 (277)
T ss_pred EEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchheEEEeccCCCcceEecc
Confidence 999999999997651 2478899999999999999999985 899999999999998654 599999
Q ss_pred ccCccccCcccCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhC
Q 041479 667 FGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMAL 730 (771)
Q Consensus 667 fGla~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~ 730 (771)
||+++....... ........++..|+||| +||++|||++ |..||.+... ..+.+......
T Consensus 163 fg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~--~~~~~~~~~~~ 238 (277)
T cd05036 163 FGMARDIYRASY--YRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTN--QEVMEFVTGGG 238 (277)
T ss_pred CccccccCCccc--eecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHHHcCC
Confidence 999986532211 11111223456899999 6999999997 9999875321 12333333322
Q ss_pred CCchhhhcCccccccCcccChhchhhcCCHHHHHHHHHH
Q 041479 731 PDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIA 769 (771)
Q Consensus 731 ~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~ 769 (771)
+...+..++..+.....+|++.+|++|||+.+|++.|++
T Consensus 239 ~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~~ 277 (277)
T cd05036 239 RLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQY 277 (277)
T ss_pred cCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhhC
Confidence 222233344555566779999999999999999999874
No 184
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=99.97 E-value=3.5e-30 Score=270.14 Aligned_cols=233 Identities=22% Similarity=0.249 Sum_probs=182.0
Q ss_pred ccccccccccceEEEEEecCC-----CeEEEEEEeeccc-hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeE
Q 041479 525 LNVSYESLVKATVYKGILDLD-----QTFIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFR 598 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~~-----~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 598 (771)
....+|+|.+|.||+|..+.. +..||+|.+.... ......+.+|+++++.++||||+++++++.... ..
T Consensus 10 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-----~~ 84 (277)
T cd05032 10 LIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQ-----PT 84 (277)
T ss_pred EEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCC-----Cc
Confidence 345689999999999988643 3789999986443 344568899999999999999999999987765 67
Q ss_pred EEEEEeccCCCCCCCc-------------ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEe
Q 041479 599 ALVYEFMHHGSLESCP-------------RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMG 665 (771)
Q Consensus 599 ~lv~e~~~~g~L~~~~-------------~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~ 665 (771)
++||||+++|+|.++. ..+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+
T Consensus 85 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di~p~nill~~~~~~kl~ 161 (277)
T cd05032 85 LVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHRDLAARNCMVAEDLTVKIG 161 (277)
T ss_pred EEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccChheEEEcCCCCEEEC
Confidence 9999999999997651 1367788999999999999999985 99999999999999999999999
Q ss_pred cccCccccCcccCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhh
Q 041479 666 DFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMA 729 (771)
Q Consensus 666 DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~ 729 (771)
|||+++........ .......++..|+||| |||++||+++ |+.||.+.. .....+.....
T Consensus 162 dfg~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~--~~~~~~~~~~~ 237 (277)
T cd05032 162 DFGMTRDIYETDYY--RKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLS--NEEVLKFVIDG 237 (277)
T ss_pred CcccchhhccCccc--ccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCC--HHHHHHHHhcC
Confidence 99999865432211 1112234678999999 6999999998 999986532 12233333332
Q ss_pred CCCchhhhcCccccccCcccChhchhhcCCHHHHHHHHHH
Q 041479 730 LPDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIA 769 (771)
Q Consensus 730 ~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~ 769 (771)
.....+...+..+.....+||+.+|++|||+.++++.|++
T Consensus 238 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 277 (277)
T cd05032 238 GHLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLKD 277 (277)
T ss_pred CCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhcC
Confidence 2223334445666667779999999999999999999864
No 185
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.97 E-value=3.8e-30 Score=266.74 Aligned_cols=230 Identities=22% Similarity=0.286 Sum_probs=178.9
Q ss_pred cccccccceEEEEEecC-CC--eEEEEEEeeccch-hhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEE
Q 041479 528 SYESLVKATVYKGILDL-DQ--TFIAVKVLFLHQR-GALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYE 603 (771)
Q Consensus 528 ~l~~~~~~~Vy~~~~~~-~~--~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e 603 (771)
.+|+|.+|+||+|.+.. ++ ..||||.+..... ...+++.+|++++++++||||+++++++.+ . ..++|||
T Consensus 2 ~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~-----~~~~v~e 75 (257)
T cd05040 2 KLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-H-----PLMMVTE 75 (257)
T ss_pred cCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-C-----eEEEEEE
Confidence 36899999999999865 33 3699999976655 567889999999999999999999999876 4 6799999
Q ss_pred eccCCCCCCC----c-ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccC
Q 041479 604 FMHHGSLESC----P-RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMS 678 (771)
Q Consensus 604 ~~~~g~L~~~----~-~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 678 (771)
|+++|+|.+. . ..+++.....++.|++.||+|||+. +++||||||+||+++.++.+|++|||+++.......
T Consensus 76 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~ 152 (257)
T cd05040 76 LAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARNILLASDDKVKIGDFGLMRALPQNED 152 (257)
T ss_pred ecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCcccEEEecCCEEEecccccccccccccc
Confidence 9999999765 1 3578999999999999999999985 999999999999999999999999999987654322
Q ss_pred Ccccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHh-hCCCchhhhcCcc
Q 041479 679 SNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKM-ALPDQILQVLDPL 741 (771)
Q Consensus 679 ~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 741 (771)
... ......++..|+||| +||++|||++ |+.||.+.... ...+.... ..........+..
T Consensus 153 ~~~-~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 229 (257)
T cd05040 153 HYV-MEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGS--QILKKIDKEGERLERPEACPQD 229 (257)
T ss_pred cee-cccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHhcCCcCCCCccCCHH
Confidence 111 111345778899999 6999999999 99998643221 12222221 1112222233445
Q ss_pred ccccCcccChhchhhcCCHHHHHHHHHH
Q 041479 742 FLVGGVQEGEETAEENIKKGQIRESLIA 769 (771)
Q Consensus 742 ~~~~~~~cl~~~p~~Rpt~~~vl~~L~~ 769 (771)
+.....+|+..+|++|||+.++++.|.+
T Consensus 230 ~~~li~~~l~~~p~~Rps~~~~~~~l~~ 257 (257)
T cd05040 230 IYNVMLQCWAHNPADRPTFAALREFLPE 257 (257)
T ss_pred HHHHHHHHCCCCcccCCCHHHHHHHhcC
Confidence 5556679999999999999999998863
No 186
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.97 E-value=4e-30 Score=268.23 Aligned_cols=229 Identities=21% Similarity=0.224 Sum_probs=180.0
Q ss_pred cccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEE
Q 041479 524 LLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYE 603 (771)
Q Consensus 524 ~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e 603 (771)
.....+|+|.+|.||+|++..+++.||+|.++.........+.+|+.+++.++||||+++++++...+ ..|+|||
T Consensus 12 ~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~-----~~~lv~e 86 (267)
T cd06645 12 ELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRD-----KLWICME 86 (267)
T ss_pred HHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCC-----EEEEEEe
Confidence 34456899999999999999888999999997665555567889999999999999999999987766 7899999
Q ss_pred eccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCc
Q 041479 604 FMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSN 680 (771)
Q Consensus 604 ~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 680 (771)
|+++++|.++ ...+++.+...++.|++.|+.|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 87 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~--- 160 (267)
T cd06645 87 FCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTDNGHVKLADFGVSAQITATI--- 160 (267)
T ss_pred ccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECcceeeeEccCcc---
Confidence 9999999875 34688999999999999999999986 89999999999999999999999999987554321
Q ss_pred ccccccccccccccchh------------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCC-Cchhh--hcC
Q 041479 681 QCSSVGLKGTVGYATPE------------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALP-DQILQ--VLD 739 (771)
Q Consensus 681 ~~~~~~~~gt~~y~aPE------------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~ 739 (771)
.......|++.|+||| +||++|||++|+.||.+...... .......... ..... .++
T Consensus 161 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 238 (267)
T cd06645 161 -AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA-LFLMTKSNFQPPKLKDKMKWS 238 (267)
T ss_pred -cccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhh-HHhhhccCCCCCcccccCCCC
Confidence 1122346899999999 59999999999999865322111 1111111111 11111 123
Q ss_pred ccccccCcccChhchhhcCCHHHHHH
Q 041479 740 PLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 740 ~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
..+.....+|++.+|++|||+.++++
T Consensus 239 ~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 239 NSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred HHHHHHHHHHccCCchhCcCHHHHhc
Confidence 34445666999999999999999875
No 187
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.97 E-value=1.4e-30 Score=280.51 Aligned_cols=223 Identities=23% Similarity=0.171 Sum_probs=169.3
Q ss_pred ccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhcc---CCCCceeEEEEeecCCCCCceeEEEEE
Q 041479 529 YESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNI---RHRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 529 l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l---~H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
+|+|.+|+||+|+++.+++.||||++.... ......+..|..++.+. +||||+++++++.+.+ ..|+||
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~-----~~~lv~ 75 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDS-----DLYLVT 75 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCC-----eEEEEE
Confidence 589999999999999988999999996432 22334566677777765 6999999999988776 789999
Q ss_pred EeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCC
Q 041479 603 EFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSS 679 (771)
Q Consensus 603 e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 679 (771)
||+++|+|... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 76 e~~~~g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~- 151 (330)
T cd05586 76 DYMSGGELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENILLDATGHIALCDFGLSKANLTDNK- 151 (330)
T ss_pred cCCCCChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCC-
Confidence 99999999654 34688999999999999999999985 999999999999999999999999999875322211
Q ss_pred cccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCcccc
Q 041479 680 NQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFL 743 (771)
Q Consensus 680 ~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 743 (771)
.....+||+.||||| +||++|||++|+.||....... ....+.....+. ....+++...
T Consensus 152 ---~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~-~~~~i~~~~~~~-~~~~~~~~~~ 226 (330)
T cd05586 152 ---TTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQ-MYRNIAFGKVRF-PKNVLSDEGR 226 (330)
T ss_pred ---CccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHH-HHHHHHcCCCCC-CCccCCHHHH
Confidence 122456999999999 6999999999999996532111 111111111111 1123445555
Q ss_pred ccCcccChhchhhcCC----HHHHHH
Q 041479 744 VGGVQEGEETAEENIK----KGQIRE 765 (771)
Q Consensus 744 ~~~~~cl~~~p~~Rpt----~~~vl~ 765 (771)
....+||..||++||+ +.++++
T Consensus 227 ~li~~~L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 227 QFVKGLLNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred HHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence 5667999999999994 555543
No 188
>PTZ00036 glycogen synthase kinase; Provisional
Probab=99.97 E-value=2.6e-30 Score=288.03 Aligned_cols=228 Identities=21% Similarity=0.221 Sum_probs=167.8
Q ss_pred cccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCC---CCceeEEE
Q 041479 524 LLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF---QGNYFRAL 600 (771)
Q Consensus 524 ~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~---~~~~~~~l 600 (771)
.....+|+|.+|+||+|++..+++.||||++.... ....+|+.+++.++|||||++++++..... ....+.++
T Consensus 69 ~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~l 144 (440)
T PTZ00036 69 KLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLNV 144 (440)
T ss_pred EEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEEEE
Confidence 34456899999999999999888899999885332 234579999999999999999998755432 12235789
Q ss_pred EEEeccCCCCCCC-------cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCC-ceEEecccCccc
Q 041479 601 VYEFMHHGSLESC-------PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDM-TAHMGDFGLTRF 672 (771)
Q Consensus 601 v~e~~~~g~L~~~-------~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~-~~kl~DfGla~~ 672 (771)
||||+++ ++.++ ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++ .+||+|||+|+.
T Consensus 145 vmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NILl~~~~~~vkL~DFGla~~ 220 (440)
T PTZ00036 145 VMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLLIDPNTHTLKLCDFGSAKN 220 (440)
T ss_pred EEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEEEcCCCCceeeeccccchh
Confidence 9999986 44322 34688889999999999999999985 899999999999998654 799999999986
Q ss_pred cCcccCCcccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhh-------
Q 041479 673 IPEVMSSNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMA------- 729 (771)
Q Consensus 673 ~~~~~~~~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~------- 729 (771)
+..... .....||+.||||| +||++|||++|+.||.+..... .+.......
T Consensus 221 ~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~-~~~~i~~~~~~p~~~~ 294 (440)
T PTZ00036 221 LLAGQR-----SVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVD-QLVRIIQVLGTPTEDQ 294 (440)
T ss_pred ccCCCC-----cccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCCHHH
Confidence 543221 22346899999999 6999999999999997532111 111111100
Q ss_pred ------------CC----Cc----hhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 730 ------------LP----DQ----ILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 730 ------------~~----~~----~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
++ .. ++...++.+.....+||+.||++|||+.|+++
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~ 350 (440)
T PTZ00036 295 LKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALA 350 (440)
T ss_pred HHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhC
Confidence 00 00 01112233444566999999999999999984
No 189
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.97 E-value=1.4e-30 Score=285.80 Aligned_cols=231 Identities=20% Similarity=0.194 Sum_probs=171.7
Q ss_pred ccccccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEE
Q 041479 525 LNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALV 601 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv 601 (771)
....+|+|.+|+||+|+...+++.||||++.... ....+.+.+|++++++++||||+++++++.+.+ ..|+|
T Consensus 5 ~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~-----~~~lv 79 (376)
T cd05598 5 KIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKD-----NLYFV 79 (376)
T ss_pred EEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCC-----EEEEE
Confidence 3456899999999999999999999999996432 234567889999999999999999999988776 78999
Q ss_pred EEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccC
Q 041479 602 YEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMS 678 (771)
Q Consensus 602 ~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 678 (771)
|||+++|+|.++ ...+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+|..+.....
T Consensus 80 ~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~ 156 (376)
T cd05598 80 MDYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHD 156 (376)
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEEECCCCCEEEEeCCCCcccccccc
Confidence 999999999776 34577888889999999999999985 999999999999999999999999999853311000
Q ss_pred ---------------------------------------Ccccccccccccccccchh---------------HHHHHHH
Q 041479 679 ---------------------------------------SNQCSSVGLKGTVGYATPE---------------YGILLLE 704 (771)
Q Consensus 679 ---------------------------------------~~~~~~~~~~gt~~y~aPE---------------~Gv~l~e 704 (771)
...+.....+||+.||||| +||++||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilye 236 (376)
T cd05598 157 SKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYE 236 (376)
T ss_pred ccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceeee
Confidence 0001112357999999999 6999999
Q ss_pred HHhCCCCCCccccCCccHHHHHHhh--CCCchhhhcCccccccCcccChhchhhcC---CHHHHHH
Q 041479 705 IFTGKRPTSDMFTEGLDLHNFVKMA--LPDQILQVLDPLFLVGGVQEGEETAEENI---KKGQIRE 765 (771)
Q Consensus 705 l~tg~~P~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~cl~~~p~~Rp---t~~~vl~ 765 (771)
|++|+.||.+...... ........ .+......+++.......+|+ .+|++|+ |+.++++
T Consensus 237 ll~G~~Pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~ 300 (376)
T cd05598 237 MLVGQPPFLADTPAET-QLKVINWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKA 300 (376)
T ss_pred hhhCCCCCCCCCHHHH-HHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhC
Confidence 9999999975322111 11111111 111111123333333333554 5999999 8888874
No 190
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.97 E-value=6.3e-30 Score=265.00 Aligned_cols=227 Identities=28% Similarity=0.298 Sum_probs=178.6
Q ss_pred cccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEE
Q 041479 524 LLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYE 603 (771)
Q Consensus 524 ~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e 603 (771)
.....+|+|.+|.||+|..+ ++.||+|.++... ..+.+.+|+.++++++|+||+++++++...+. ..++|||
T Consensus 9 ~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~----~~~lv~e 80 (256)
T cd05082 9 KLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG----GLYIVTE 80 (256)
T ss_pred eeeeeecccCCCeEEEEEEc--CCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCC----ceEEEEE
Confidence 34456899999999999775 4579999985432 35689999999999999999999998654331 5799999
Q ss_pred eccCCCCCCC-----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccC
Q 041479 604 FMHHGSLESC-----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMS 678 (771)
Q Consensus 604 ~~~~g~L~~~-----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 678 (771)
|+++|+|.++ ...+++..+..++.|++.||+|||+. +|+||||||+||++++++.+|++|||+++......
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~- 156 (256)
T cd05082 81 YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ- 156 (256)
T ss_pred CCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeccccchheEEEcCCCcEEecCCccceeccccC-
Confidence 9999999765 22378889999999999999999985 89999999999999999999999999987543221
Q ss_pred Ccccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhhhcCccc
Q 041479 679 SNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLF 742 (771)
Q Consensus 679 ~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 742 (771)
....++..|+||| +||++|||++ |+.||.... ...+........+....+.+++.+
T Consensus 157 ------~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 228 (256)
T cd05082 157 ------DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP--LKDVVPRVEKGYKMDAPDGCPPVV 228 (256)
T ss_pred ------CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHhcCCCCCCCCCCCHHH
Confidence 1123567899999 6999999998 999986431 112333333333444445556666
Q ss_pred cccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 743 LVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 743 ~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
.....+|+..+|++|||+.++++.|+++
T Consensus 229 ~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 229 YDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred HHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 6677799999999999999999999874
No 191
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.97 E-value=4.6e-30 Score=273.23 Aligned_cols=237 Identities=22% Similarity=0.297 Sum_probs=181.3
Q ss_pred ccccccccccccceEEEEEec-------CCCeEEEEEEeeccc-hhhHHHHHHHHHHHhcc-CCCCceeEEEEeecCCCC
Q 041479 523 LLLNVSYESLVKATVYKGILD-------LDQTFIAVKVLFLHQ-RGALKSFMAECQALRNI-RHRNLVKIITACSTSDFQ 593 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~-------~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~ 593 (771)
+.....+|+|.+|.||+|++. .++..||+|.+.... ....+++.+|+.+++.+ +||||+++++++....
T Consensus 17 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~-- 94 (304)
T cd05101 17 LTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG-- 94 (304)
T ss_pred eeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecCC--
Confidence 444567899999999999752 234579999986432 34457899999999999 7999999999987765
Q ss_pred CceeEEEEEEeccCCCCCCCc-------------------ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCe
Q 041479 594 GNYFRALVYEFMHHGSLESCP-------------------RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNV 654 (771)
Q Consensus 594 ~~~~~~lv~e~~~~g~L~~~~-------------------~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NI 654 (771)
..|+||||+++|+|.++. ..+++.++..++.|++.||+|||+. +|+||||||+||
T Consensus 95 ---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Ni 168 (304)
T cd05101 95 ---PLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCIHRDLAARNV 168 (304)
T ss_pred ---ceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---CeeecccccceE
Confidence 679999999999986541 2467888999999999999999985 999999999999
Q ss_pred eeCCCCceEEecccCccccCcccCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccC
Q 041479 655 LLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTE 718 (771)
Q Consensus 655 Ll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~ 718 (771)
+++.++.+||+|||+++........ .......+++.|+||| ||+++||+++ |..||.....
T Consensus 169 li~~~~~~kl~D~g~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~- 245 (304)
T cd05101 169 LVTENNVMKIADFGLARDVNNIDYY--KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV- 245 (304)
T ss_pred EEcCCCcEEECCCccceeccccccc--ccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH-
Confidence 9999999999999999866433221 1112234677899999 6999999999 7888854311
Q ss_pred CccHHHHHHhhCCCchhhhcCccccccCcccChhchhhcCCHHHHHHHHHHhC
Q 041479 719 GLDLHNFVKMALPDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAIL 771 (771)
Q Consensus 719 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~l 771 (771)
..+.+......+...+..++..+.....+||..+|++|||+.|+++.|++++
T Consensus 246 -~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~ 297 (304)
T cd05101 246 -EELFKLLKEGHRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRIL 297 (304)
T ss_pred -HHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHH
Confidence 1222333322222223334455556677999999999999999999999863
No 192
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.97 E-value=7.3e-30 Score=263.46 Aligned_cols=227 Identities=25% Similarity=0.292 Sum_probs=177.2
Q ss_pred cccccccceEEEEEecCCCeEEEEEEeeccc-hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEecc
Q 041479 528 SYESLVKATVYKGILDLDQTFIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMH 606 (771)
Q Consensus 528 ~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~~~ 606 (771)
.+|+|.+|.||+|..++ ++.||+|.+.... ......+.+|++++++++||||+++++++...+ ..++||||++
T Consensus 2 ~ig~g~~g~vy~~~~~~-~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~lv~e~~~ 75 (250)
T cd05085 2 LLGKGNFGEVFKGTLKD-KTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQ-----PIYIVMELVP 75 (250)
T ss_pred ccCCCCCceEEEEEecC-CcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCC-----ccEEEEECCC
Confidence 36899999999999764 5599999986543 333457899999999999999999999987766 6799999999
Q ss_pred CCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCccc
Q 041479 607 HGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQC 682 (771)
Q Consensus 607 ~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 682 (771)
+|+|.++ ...+++..+..++.|++.||.|+|+. +++||||||+||+++.++.+|++|||+++........
T Consensus 76 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~--- 149 (250)
T cd05085 76 GGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYS--- 149 (250)
T ss_pred CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEEEcCCCeEEECCCccceeccccccc---
Confidence 9999765 23478899999999999999999985 8999999999999999999999999998754332211
Q ss_pred ccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhhhcCccccccC
Q 041479 683 SSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFLVGG 746 (771)
Q Consensus 683 ~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 746 (771)
......+++.|+||| ||+++||+++ |..||.+... ...........+......++..+....
T Consensus 150 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~li 227 (250)
T cd05085 150 SSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTN--QQAREQVEKGYRMSCPQKCPDDVYKVM 227 (250)
T ss_pred cCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCH--HHHHHHHHcCCCCCCCCCCCHHHHHHH
Confidence 111123467799999 6999999999 9999965421 112222222322233334555666677
Q ss_pred cccChhchhhcCCHHHHHHHHH
Q 041479 747 VQEGEETAEENIKKGQIRESLI 768 (771)
Q Consensus 747 ~~cl~~~p~~Rpt~~~vl~~L~ 768 (771)
.+|++.+|++|||+.|+++.|.
T Consensus 228 ~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 228 QRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred HHHcccCcccCCCHHHHHHHhc
Confidence 7999999999999999999875
No 193
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=99.97 E-value=6.9e-30 Score=268.46 Aligned_cols=234 Identities=20% Similarity=0.280 Sum_probs=184.2
Q ss_pred cccccccccceEEEEEecC----CCeEEEEEEeecc-chhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEE
Q 041479 526 NVSYESLVKATVYKGILDL----DQTFIAVKVLFLH-QRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRAL 600 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~----~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~l 600 (771)
...+|+|.+|+||+|.+.. ++..||+|++... .....+.+.+|+.++++++||||+++++++...+. ..++
T Consensus 11 ~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~----~~~~ 86 (280)
T cd05043 11 SDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGE----PPFV 86 (280)
T ss_pred eeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCC----CCEE
Confidence 4557999999999999876 2568999998644 23456788999999999999999999999876431 5689
Q ss_pred EEEeccCCCCCCCc-----------ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccC
Q 041479 601 VYEFMHHGSLESCP-----------RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGL 669 (771)
Q Consensus 601 v~e~~~~g~L~~~~-----------~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl 669 (771)
++||+++|+|..+. ..+++..+..++.|++.||+|||+. +++||||||+||++++++.+|++|||+
T Consensus 87 ~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kl~d~g~ 163 (280)
T cd05043 87 LYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCVIDEELQVKITDNAL 163 (280)
T ss_pred EEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEEEcCCCcEEECCCCC
Confidence 99999999986651 3578999999999999999999985 899999999999999999999999999
Q ss_pred ccccCcccCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCc
Q 041479 670 TRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQ 733 (771)
Q Consensus 670 a~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~ 733 (771)
++.+...... .......++..|+||| +||++||+++ |+.||.+.. ...+..+.....+..
T Consensus 164 ~~~~~~~~~~--~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~--~~~~~~~~~~~~~~~ 239 (280)
T cd05043 164 SRDLFPMDYH--CLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEID--PFEMAAYLKDGYRLA 239 (280)
T ss_pred cccccCCceE--EeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCC--HHHHHHHHHcCCCCC
Confidence 9865432211 1112234677899999 6999999999 999997532 223444444444333
Q ss_pred hhhhcCccccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 734 ILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 734 ~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
....+++.+.....+||..||++|||+.++++.|+++
T Consensus 240 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~ 276 (280)
T cd05043 240 QPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDF 276 (280)
T ss_pred CCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 3333455666677799999999999999999999876
No 194
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.97 E-value=3.7e-30 Score=274.37 Aligned_cols=238 Identities=25% Similarity=0.308 Sum_probs=182.7
Q ss_pred cccccccccccccceEEEEEecC-------CCeEEEEEEeeccc-hhhHHHHHHHHHHHhcc-CCCCceeEEEEeecCCC
Q 041479 522 DLLLNVSYESLVKATVYKGILDL-------DQTFIAVKVLFLHQ-RGALKSFMAECQALRNI-RHRNLVKIITACSTSDF 592 (771)
Q Consensus 522 ~~~~~~~l~~~~~~~Vy~~~~~~-------~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~ 592 (771)
.+.....+|+|.+|+||++++.. ....||+|.+.... .....++.+|+++++++ +||||+++++++...+
T Consensus 19 ~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~- 97 (307)
T cd05098 19 RLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG- 97 (307)
T ss_pred HeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC-
Confidence 34455678999999999998643 23479999997542 34456788999999999 7999999999998776
Q ss_pred CCceeEEEEEEeccCCCCCCCc-------------------ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCC
Q 041479 593 QGNYFRALVYEFMHHGSLESCP-------------------RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSN 653 (771)
Q Consensus 593 ~~~~~~~lv~e~~~~g~L~~~~-------------------~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~N 653 (771)
..|+||||+++|+|.++. ..+++.++..++.|++.||+|||+. +++||||||+|
T Consensus 98 ----~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~N 170 (307)
T cd05098 98 ----PLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHRDLAARN 170 (307)
T ss_pred ----ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHHh
Confidence 679999999999986551 2478889999999999999999985 99999999999
Q ss_pred eeeCCCCceEEecccCccccCcccCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCcccc
Q 041479 654 VLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFT 717 (771)
Q Consensus 654 ILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~ 717 (771)
|+++.++.+|++|||.++........ .......+++.|+||| +||++|||++ |..||.+...
T Consensus 171 ill~~~~~~kL~dfg~a~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~ 248 (307)
T cd05098 171 VLVTEDNVMKIADFGLARDIHHIDYY--KKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV 248 (307)
T ss_pred eEEcCCCcEEECCCcccccccccchh--hccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCH
Confidence 99999999999999999765432111 1111223457899999 6999999998 8888864321
Q ss_pred CCccHHHHHHhhCCCchhhhcCccccccCcccChhchhhcCCHHHHHHHHHHhC
Q 041479 718 EGLDLHNFVKMALPDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAIL 771 (771)
Q Consensus 718 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~l 771 (771)
..+.+......+...+..++..+.....+|+..+|++||||.++++.|++++
T Consensus 249 --~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~ 300 (307)
T cd05098 249 --EELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 300 (307)
T ss_pred --HHHHHHHHcCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHH
Confidence 1233333333333333444556666677999999999999999999999863
No 195
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.97 E-value=1.3e-30 Score=280.76 Aligned_cols=228 Identities=19% Similarity=0.123 Sum_probs=177.2
Q ss_pred ccccccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEE
Q 041479 525 LNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALV 601 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv 601 (771)
....+|+|.+|+||+++.+.+++.||||++.... ....+.+.+|+.+++.++||||+++++++.+.+ ..|+|
T Consensus 5 ~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~-----~~~lv 79 (330)
T cd05601 5 VKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKD-----NLYLV 79 (330)
T ss_pred EEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCC-----eEEEE
Confidence 3456899999999999999999999999997543 234567889999999999999999999987766 78999
Q ss_pred EEeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCccc
Q 041479 602 YEFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVM 677 (771)
Q Consensus 602 ~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~ 677 (771)
|||+++|+|.++ ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 80 ~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~ 156 (330)
T cd05601 80 MEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVLIDRTGHIKLADFGSAARLTANK 156 (330)
T ss_pred ECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheEECCCCCEEeccCCCCeECCCCC
Confidence 999999999776 24688899999999999999999985 99999999999999999999999999998654322
Q ss_pred CCcccccccccccccccchh---------------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhC--CCch
Q 041479 678 SSNQCSSVGLKGTVGYATPE---------------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMAL--PDQI 734 (771)
Q Consensus 678 ~~~~~~~~~~~gt~~y~aPE---------------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~--~~~~ 734 (771)
. .......||+.|+||| +||++|||++|+.||.+.... ..+........ ....
T Consensus 157 ~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~-~~~~~i~~~~~~~~~~~ 232 (330)
T cd05601 157 M---VNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSA-KTYNNIMNFQRFLKFPE 232 (330)
T ss_pred c---eeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHH-HHHHHHHcCCCccCCCC
Confidence 1 1222346899999999 599999999999999653211 11222221111 1111
Q ss_pred hhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 735 LQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 735 ~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
...+++.+.....+|+. +|++|||+.++++
T Consensus 233 ~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~ 262 (330)
T cd05601 233 DPKVSSDFLDLIQSLLC-GQKERLGYEGLCC 262 (330)
T ss_pred CCCCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence 11234445455568887 9999999999874
No 196
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.97 E-value=9.2e-30 Score=267.38 Aligned_cols=232 Identities=21% Similarity=0.277 Sum_probs=182.1
Q ss_pred cccccccccceEEEEEecCCCe----EEEEEEeeccc-hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEE
Q 041479 526 NVSYESLVKATVYKGILDLDQT----FIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRAL 600 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~----~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~l 600 (771)
...+|+|.+|+||+|.++.+++ .||+|.+.... ......+.+|+.++++++||||+++++++.. . ..++
T Consensus 12 ~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~-----~~~~ 85 (279)
T cd05057 12 IKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-S-----QVQL 85 (279)
T ss_pred cceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-C-----ceEE
Confidence 3568999999999999876543 68999886553 3455789999999999999999999999876 2 5789
Q ss_pred EEEeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcc
Q 041479 601 VYEFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676 (771)
Q Consensus 601 v~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~ 676 (771)
||||+++|+|.++ ...+++..+..++.|++.|++|||+. +|+||||||+||++++++.+|++|||+++.....
T Consensus 86 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~ 162 (279)
T cd05057 86 ITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVD 162 (279)
T ss_pred EEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEEEcCCCeEEECCCcccccccCc
Confidence 9999999999765 23588999999999999999999985 9999999999999999999999999999876532
Q ss_pred cCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhhhcCc
Q 041479 677 MSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQVLDP 740 (771)
Q Consensus 677 ~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 740 (771)
... ....+..++..|+||| ||+++||+++ |+.||.+... ..+.+......+...+...+.
T Consensus 163 ~~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 238 (279)
T cd05057 163 EKE--YHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPA--VEIPDLLEKGERLPQPPICTI 238 (279)
T ss_pred ccc--eecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCH--HHHHHHHhCCCCCCCCCCCCH
Confidence 221 1112223467899999 6999999999 9999976422 223333333333333334445
Q ss_pred cccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 741 LFLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 741 ~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
.+.....+||..+|++|||+.++++.|+++
T Consensus 239 ~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~ 268 (279)
T cd05057 239 DVYMVLVKCWMIDAESRPTFKELINEFSKM 268 (279)
T ss_pred HHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 555566799999999999999999999875
No 197
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.97 E-value=4.7e-30 Score=269.29 Aligned_cols=224 Identities=19% Similarity=0.251 Sum_probs=178.5
Q ss_pred cccccccceEEEEEecCCCeEEEEEEeeccc-hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEecc
Q 041479 528 SYESLVKATVYKGILDLDQTFIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMH 606 (771)
Q Consensus 528 ~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~~~ 606 (771)
.+|+|.+|.||+|.+..+++.||+|.+.... ....+.+.+|++++++++||||+++++++.... ..|+||||++
T Consensus 11 ~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~lv~e~~~ 85 (277)
T cd06642 11 RIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGT-----KLWIIMEYLG 85 (277)
T ss_pred HhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCC-----ceEEEEEccC
Confidence 4789999999999999888899999986443 344568999999999999999999999987765 6899999999
Q ss_pred CCCCCCC--cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCccccc
Q 041479 607 HGSLESC--PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSS 684 (771)
Q Consensus 607 ~g~L~~~--~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~ 684 (771)
+++|.++ ...+++..+..++.|++.|+.|||+. +++|+||+|+||+++.++.+|++|||+++....... ..
T Consensus 86 ~~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~----~~ 158 (277)
T cd06642 86 GGSALDLLKPGPLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI----KR 158 (277)
T ss_pred CCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEEEeCCCCEEEccccccccccCcch----hh
Confidence 9999766 34578889999999999999999985 999999999999999999999999999976543221 11
Q ss_pred ccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCccccccCccc
Q 041479 685 VGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFLVGGVQE 749 (771)
Q Consensus 685 ~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c 749 (771)
....|+..|+||| |||++||+++|+.|+.+..... .........+.......+..+.....+|
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~li~~~ 236 (277)
T cd06642 159 NTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMR--VLFLIPKNSPPTLEGQYSKPFKEFVEAC 236 (277)
T ss_pred hcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhh--HHhhhhcCCCCCCCcccCHHHHHHHHHH
Confidence 2245788999999 6999999999999987543221 2222222222223333444455566699
Q ss_pred ChhchhhcCCHHHHHH
Q 041479 750 GEETAEENIKKGQIRE 765 (771)
Q Consensus 750 l~~~p~~Rpt~~~vl~ 765 (771)
|..+|++||||.++++
T Consensus 237 l~~~p~~Rp~~~~il~ 252 (277)
T cd06642 237 LNKDPRFRPTAKELLK 252 (277)
T ss_pred ccCCcccCcCHHHHHH
Confidence 9999999999999997
No 198
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=99.97 E-value=7.8e-30 Score=268.71 Aligned_cols=226 Identities=25% Similarity=0.265 Sum_probs=177.2
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEE
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYE 603 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e 603 (771)
..+|+|.+|+||++.+..+++.||||.+.... ....+.+.+|+.++++++|++|+++++++.+.+ ..++|||
T Consensus 6 ~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~-----~~~lv~e 80 (285)
T cd05630 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKD-----ALCLVLT 80 (285)
T ss_pred EEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCC-----EEEEEEE
Confidence 34799999999999999999999999986542 223356788999999999999999999987766 7899999
Q ss_pred eccCCCCCCC-----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccC
Q 041479 604 FMHHGSLESC-----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMS 678 (771)
Q Consensus 604 ~~~~g~L~~~-----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 678 (771)
|+++|+|.+. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.++++|||++........
T Consensus 81 ~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 157 (285)
T cd05630 81 LMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT 157 (285)
T ss_pred ecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeccceeecCCCcc
Confidence 9999999765 23588889999999999999999985 999999999999999999999999999875433221
Q ss_pred Ccccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCc-cHHHHHHhhCCCchhhhcCccc
Q 041479 679 SNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGL-DLHNFVKMALPDQILQVLDPLF 742 (771)
Q Consensus 679 ~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 742 (771)
.....|++.|+||| +||++|||++|+.||........ ..........+......+++.+
T Consensus 158 -----~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (285)
T cd05630 158 -----IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVQEEYSEKFSPDA 232 (285)
T ss_pred -----ccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhhhhhcCccCCHHH
Confidence 12346899999999 69999999999999975322110 0111111112222334455566
Q ss_pred cccCcccChhchhhcCC-----HHHHHH
Q 041479 743 LVGGVQEGEETAEENIK-----KGQIRE 765 (771)
Q Consensus 743 ~~~~~~cl~~~p~~Rpt-----~~~vl~ 765 (771)
.....+||+.||++||| +.|+++
T Consensus 233 ~~li~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 233 RSLCKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred HHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence 66677999999999999 788875
No 199
>PHA03212 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=3.7e-30 Score=282.27 Aligned_cols=173 Identities=22% Similarity=0.347 Sum_probs=145.1
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
+.....+|+|.+|.||+|++..+++.||+|... .+.+.+|++++++++|||||++++++.... ..++||
T Consensus 94 y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~-----~~~lv~ 162 (391)
T PHA03212 94 FSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNK-----FTCLIL 162 (391)
T ss_pred cEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECC-----eeEEEE
Confidence 334456899999999999999999999999753 245788999999999999999999987765 679999
Q ss_pred EeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCC
Q 041479 603 EFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSS 679 (771)
Q Consensus 603 e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 679 (771)
||+. ++|..+ ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+|+.......
T Consensus 163 e~~~-~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~- 237 (391)
T PHA03212 163 PRYK-TDLYCYLAAKRNIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINA- 237 (391)
T ss_pred ecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEcCCCCEEEEeCCcccccccccc-
Confidence 9995 576544 34688999999999999999999985 999999999999999999999999999975432211
Q ss_pred cccccccccccccccchh---------------HHHHHHHHHhCCCCCC
Q 041479 680 NQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTS 713 (771)
Q Consensus 680 ~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~ 713 (771)
......+||+.|+||| +||++|||++|+.|+.
T Consensus 238 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~ 284 (391)
T PHA03212 238 --NKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLF 284 (391)
T ss_pred --cccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcC
Confidence 1122457999999999 6999999999998764
No 200
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.97 E-value=4e-30 Score=280.23 Aligned_cols=183 Identities=22% Similarity=0.216 Sum_probs=149.1
Q ss_pred cccccccccccceEEEEEecCCCeEEEEEEeecc--chhhHHHHHHHHHHHhccCCCCceeEEEEeecCCC-CCceeEEE
Q 041479 524 LLNVSYESLVKATVYKGILDLDQTFIAVKVLFLH--QRGALKSFMAECQALRNIRHRNLVKIITACSTSDF-QGNYFRAL 600 (771)
Q Consensus 524 ~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~-~~~~~~~l 600 (771)
.....+|+|.+|+||++++..+++.||||++... .....+.+.+|+.+++.++||||+++++++...+. ......|+
T Consensus 24 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~l 103 (359)
T cd07876 24 QQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQDVYL 103 (359)
T ss_pred EEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccceeEE
Confidence 3445689999999999999988899999999643 23345678899999999999999999999865432 11125699
Q ss_pred EEEeccCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCc
Q 041479 601 VYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSN 680 (771)
Q Consensus 601 v~e~~~~g~L~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 680 (771)
||||++++........+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 104 v~e~~~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~--- 177 (359)
T cd07876 104 VMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNF--- 177 (359)
T ss_pred EEeCCCcCHHHHHhccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEecCCCccccccCc---
Confidence 999997654333344578888999999999999999985 99999999999999999999999999997543221
Q ss_pred ccccccccccccccchh---------------HHHHHHHHHhCCCCCCc
Q 041479 681 QCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSD 714 (771)
Q Consensus 681 ~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~ 714 (771)
......||+.|+||| +||++|||++|+.||.+
T Consensus 178 --~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~ 224 (359)
T cd07876 178 --MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQG 224 (359)
T ss_pred --cCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCC
Confidence 122346899999999 69999999999999964
No 201
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.97 E-value=5.3e-30 Score=279.82 Aligned_cols=233 Identities=18% Similarity=0.117 Sum_probs=176.8
Q ss_pred cccccccccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeE
Q 041479 522 DLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFR 598 (771)
Q Consensus 522 ~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 598 (771)
++.....+|+|.+|+||+++++.+++.||+|++.... ....+.+.+|+.+++.++||||+++++++.+.+ ..
T Consensus 44 ~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~-----~~ 118 (371)
T cd05622 44 DYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR-----YL 118 (371)
T ss_pred hcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCC-----EE
Confidence 3445567899999999999999999999999996432 234456889999999999999999999988766 78
Q ss_pred EEEEEeccCCCCCCC--cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcc
Q 041479 599 ALVYEFMHHGSLESC--PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676 (771)
Q Consensus 599 ~lv~e~~~~g~L~~~--~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~ 676 (771)
|+||||+++|+|.++ ...++...+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 119 ~lv~Ey~~gg~L~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~ 195 (371)
T cd05622 119 YMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKE 195 (371)
T ss_pred EEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcC
Confidence 999999999999776 33577888889999999999999985 9999999999999999999999999999865432
Q ss_pred cCCcccccccccccccccchh-------------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCC--Cchh
Q 041479 677 MSSNQCSSVGLKGTVGYATPE-------------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALP--DQIL 735 (771)
Q Consensus 677 ~~~~~~~~~~~~gt~~y~aPE-------------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~--~~~~ 735 (771)
.. ......+||+.||||| +||++|||++|+.||.+... .....++...... ....
T Consensus 196 ~~---~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~-~~~~~~i~~~~~~~~~~~~ 271 (371)
T cd05622 196 GM---VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL-VGTYSKIMNHKNSLTFPDD 271 (371)
T ss_pred Cc---ccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCH-HHHHHHHHcCCCcccCCCc
Confidence 21 1223457999999999 59999999999999964211 1112222222111 1111
Q ss_pred hhcCccccccCcccChhchhh--cCCHHHHHHH
Q 041479 736 QVLDPLFLVGGVQEGEETAEE--NIKKGQIRES 766 (771)
Q Consensus 736 ~~~~~~~~~~~~~cl~~~p~~--Rpt~~~vl~~ 766 (771)
..++........+|+..++.+ ||++.|+++.
T Consensus 272 ~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h 304 (371)
T cd05622 272 NDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 304 (371)
T ss_pred CCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcC
Confidence 233444445556888743433 7788888763
No 202
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=99.97 E-value=2.1e-30 Score=268.97 Aligned_cols=221 Identities=22% Similarity=0.266 Sum_probs=170.9
Q ss_pred cccccccceEEEEEecCCCe-------EEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEE
Q 041479 528 SYESLVKATVYKGILDLDQT-------FIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRAL 600 (771)
Q Consensus 528 ~l~~~~~~~Vy~~~~~~~~~-------~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~l 600 (771)
.+|.|++|.||+|..+..+. .||+|.+........+.+..|+.+++.++|||||++++++...+ ..++
T Consensus 2 ~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~-----~~~l 76 (258)
T cd05078 2 SLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGD-----ESIM 76 (258)
T ss_pred CCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCC-----CcEE
Confidence 47999999999999865443 48899886655556678999999999999999999999998765 5789
Q ss_pred EEEeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCc--------eEEeccc
Q 041479 601 VYEFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMT--------AHMGDFG 668 (771)
Q Consensus 601 v~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~--------~kl~DfG 668 (771)
||||+++|+|.++ ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++. +|++|||
T Consensus 77 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g 153 (258)
T cd05078 77 VQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPG 153 (258)
T ss_pred EEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEecccccccCCCceEEecccc
Confidence 9999999999766 23478899999999999999999985 9999999999999987665 6999999
Q ss_pred CccccCcccCCcccccccccccccccchh----------------HHHHHHHHHhCC-CCCCccccCCccHHHHHHhhCC
Q 041479 669 LTRFIPEVMSSNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGK-RPTSDMFTEGLDLHNFVKMALP 731 (771)
Q Consensus 669 la~~~~~~~~~~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~-~P~~~~~~~~~~~~~~~~~~~~ 731 (771)
++...... ....+++.|+||| +||++||+++|. .|+...... ........ .
T Consensus 154 ~~~~~~~~--------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~--~~~~~~~~--~ 221 (258)
T cd05078 154 ISITVLPK--------EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQ--KKLQFYED--R 221 (258)
T ss_pred cccccCCc--------hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHH--HHHHHHHc--c
Confidence 88644321 1235788999999 699999999984 565432111 11111111 1
Q ss_pred CchhhhcCccccccCcccChhchhhcCCHHHHHHHHH
Q 041479 732 DQILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLI 768 (771)
Q Consensus 732 ~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~ 768 (771)
...+......+...+.+||+.||++|||++++++.|+
T Consensus 222 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 222 HQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred ccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 2223333344556667999999999999999999873
No 203
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.97 E-value=1.1e-29 Score=264.92 Aligned_cols=233 Identities=18% Similarity=0.174 Sum_probs=177.9
Q ss_pred cccccccccccceEEEEEecCCCeEEEEEEeeccc-----hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeE
Q 041479 524 LLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ-----RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFR 598 (771)
Q Consensus 524 ~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~-----~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 598 (771)
.....+|+|.+|.||+|....+++.||+|++.... .+..+.+.+|+.++++++||||+++++++.+... ...
T Consensus 5 ~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~---~~~ 81 (266)
T cd06651 5 RRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAE---KTL 81 (266)
T ss_pred cccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCC---CEE
Confidence 34556899999999999999888899999986432 2345678999999999999999999998765321 267
Q ss_pred EEEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCc
Q 041479 599 ALVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPE 675 (771)
Q Consensus 599 ~lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~ 675 (771)
+++|||+++++|.+. ...+++.....++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 82 ~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~ 158 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRLQT 158 (266)
T ss_pred EEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCCCcccccc
Confidence 899999999999765 34578889999999999999999985 899999999999999999999999999986543
Q ss_pred ccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCc
Q 041479 676 VMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDP 740 (771)
Q Consensus 676 ~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 740 (771)
..... .......|+..|+||| +||++||+++|+.||.+..... ...+..........+..+++
T Consensus 159 ~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 236 (266)
T cd06651 159 ICMSG-TGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMA-AIFKIATQPTNPQLPSHISE 236 (266)
T ss_pred ccccC-CccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHH-HHHHHhcCCCCCCCchhcCH
Confidence 21111 1112345889999999 6999999999999997542211 12222222222333444555
Q ss_pred cccccCcccChhchhhcCCHHHHHH
Q 041479 741 LFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 741 ~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
.+.... +||..+|++||+|+|+++
T Consensus 237 ~~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 237 HARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred HHHHHH-HHhcCChhhCcCHHHHhc
Confidence 554443 788899999999999975
No 204
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.97 E-value=7.9e-30 Score=273.56 Aligned_cols=219 Identities=19% Similarity=0.196 Sum_probs=171.2
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhccC-CCCceeEEEEeecCCCCCceeEEEEE
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIR-HRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
..+|+|.+|+||+|+.+.+++.||||++.... ....+.+..|++++..+. |++|+++++++.+.+ ..|+||
T Consensus 6 ~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~-----~~~lv~ 80 (323)
T cd05615 6 MVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVD-----RLYFVM 80 (323)
T ss_pred EEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCC-----EEEEEE
Confidence 45799999999999999999999999996542 334567888999998886 577888988887766 789999
Q ss_pred EeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCC
Q 041479 603 EFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSS 679 (771)
Q Consensus 603 e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 679 (771)
||+++|+|.++ ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 81 Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~-- 155 (323)
T cd05615 81 EYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDG-- 155 (323)
T ss_pred cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeccccccccCCCC--
Confidence 99999999766 34688999999999999999999985 99999999999999999999999999987532211
Q ss_pred cccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCccccc
Q 041479 680 NQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFLV 744 (771)
Q Consensus 680 ~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 744 (771)
.......||+.|+||| +||++|||++|+.||.+..... ......... ...+..+++....
T Consensus 156 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~-~~~~i~~~~--~~~p~~~~~~~~~ 230 (323)
T cd05615 156 --VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDE-LFQSIMEHN--VSYPKSLSKEAVS 230 (323)
T ss_pred --ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHH-HHHHHHhCC--CCCCccCCHHHHH
Confidence 1122346899999999 6999999999999997532211 111222211 1223344555555
Q ss_pred cCcccChhchhhcCCH
Q 041479 745 GGVQEGEETAEENIKK 760 (771)
Q Consensus 745 ~~~~cl~~~p~~Rpt~ 760 (771)
...+|++++|++|++.
T Consensus 231 li~~~l~~~p~~R~~~ 246 (323)
T cd05615 231 ICKGLMTKHPSKRLGC 246 (323)
T ss_pred HHHHHcccCHhhCCCC
Confidence 6679999999999985
No 205
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.97 E-value=2.7e-30 Score=273.16 Aligned_cols=227 Identities=19% Similarity=0.267 Sum_probs=180.2
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEec
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFM 605 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~~ 605 (771)
...+|+|.+|.||++....+++.||||.+........+.+.+|+.++++++||||+++++++...+ ..|+||||+
T Consensus 27 ~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~-----~~~lv~e~~ 101 (292)
T cd06658 27 FIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGD-----ELWVVMEFL 101 (292)
T ss_pred hhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCC-----eEEEEEeCC
Confidence 355899999999999998888899999997665556678999999999999999999999987766 789999999
Q ss_pred cCCCCCCC--cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCcccc
Q 041479 606 HHGSLESC--PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCS 683 (771)
Q Consensus 606 ~~g~L~~~--~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 683 (771)
++++|.++ ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||++........ .
T Consensus 102 ~~~~L~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~----~ 174 (292)
T cd06658 102 EGGALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVP----K 174 (292)
T ss_pred CCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEccCcchhhcccccc----c
Confidence 99999766 34578899999999999999999985 899999999999999999999999999875433221 1
Q ss_pred cccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCch--hhhcCccccccC
Q 041479 684 SVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQI--LQVLDPLFLVGG 746 (771)
Q Consensus 684 ~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 746 (771)
.....|++.|+||| ||+++||+++|+.||.+.... ..........+... ....+..+....
T Consensus 175 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~li 252 (292)
T cd06658 175 RKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPL--QAMRRIRDNLPPRVKDSHKVSSVLRGFL 252 (292)
T ss_pred CceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhcCCCccccccccCHHHHHHH
Confidence 12346899999999 699999999999998643211 11112222222211 123344455556
Q ss_pred cccChhchhhcCCHHHHHHH
Q 041479 747 VQEGEETAEENIKKGQIRES 766 (771)
Q Consensus 747 ~~cl~~~p~~Rpt~~~vl~~ 766 (771)
.+|+..||++|||+.++++.
T Consensus 253 ~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 253 DLMLVREPSQRATAQELLQH 272 (292)
T ss_pred HHHccCChhHCcCHHHHhhC
Confidence 69999999999999999864
No 206
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.97 E-value=9.3e-30 Score=265.97 Aligned_cols=231 Identities=20% Similarity=0.279 Sum_probs=181.1
Q ss_pred cccccccccceEEEEEecCC---CeEEEEEEeeccc-hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEE
Q 041479 526 NVSYESLVKATVYKGILDLD---QTFIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALV 601 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~---~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv 601 (771)
...+|+|.+|.||+|++... ...||||...... ....+.+.+|+.++++++||||+++++++.+. ..++|
T Consensus 11 ~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~------~~~lv 84 (270)
T cd05056 11 GRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITEN------PVWIV 84 (270)
T ss_pred eeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcCC------CcEEE
Confidence 45679999999999987654 3479999886554 44567899999999999999999999998654 35899
Q ss_pred EEeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCccc
Q 041479 602 YEFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVM 677 (771)
Q Consensus 602 ~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~ 677 (771)
|||+++|+|.++ ...+++..+..++.|++.|++|||+. +++||||||+||+++.++.+|++|||+++......
T Consensus 85 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~ 161 (270)
T cd05056 85 MELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESK---RFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDES 161 (270)
T ss_pred EEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChheEEEecCCCeEEccCceeeeccccc
Confidence 999999999776 23578999999999999999999985 89999999999999999999999999998654432
Q ss_pred CCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhhhcCcc
Q 041479 678 SSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPL 741 (771)
Q Consensus 678 ~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 741 (771)
. .......++..|+||| +|+++||+++ |..||.+.... ..........+......+++.
T Consensus 162 ~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 236 (270)
T cd05056 162 Y---YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNN--DVIGRIENGERLPMPPNCPPT 236 (270)
T ss_pred c---eecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHH--HHHHHHHcCCcCCCCCCCCHH
Confidence 1 1111223567899999 6999999996 99999754221 222223222222233445566
Q ss_pred ccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 742 FLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 742 ~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
+...+.+|+..+|++|||+.++++.|+++
T Consensus 237 ~~~li~~~l~~~P~~Rpt~~~~~~~l~~~ 265 (270)
T cd05056 237 LYSLMTKCWAYDPSKRPRFTELKAQLSDI 265 (270)
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 66677799999999999999999999886
No 207
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.97 E-value=9.2e-30 Score=268.20 Aligned_cols=224 Identities=24% Similarity=0.248 Sum_probs=174.6
Q ss_pred cccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEe
Q 041479 528 SYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEF 604 (771)
Q Consensus 528 ~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~ 604 (771)
.+|+|.+|+||+|.+..+++.||+|.+.... ....+.+.+|++++++++|+||+++.+++.+.+ ..++||||
T Consensus 7 ~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~-----~~~lv~e~ 81 (285)
T cd05632 7 VLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKD-----ALCLVLTI 81 (285)
T ss_pred EEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCC-----EEEEEEEe
Confidence 4799999999999999889899999996542 233456788999999999999999999987776 78999999
Q ss_pred ccCCCCCCC-----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCC
Q 041479 605 MHHGSLESC-----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSS 679 (771)
Q Consensus 605 ~~~g~L~~~-----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 679 (771)
+++|+|... ...+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||++........
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~- 157 (285)
T cd05632 82 MNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGES- 157 (285)
T ss_pred ccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEECCCCCEEEecCCcceecCCCCc-
Confidence 999999654 23588999999999999999999985 899999999999999999999999999875432211
Q ss_pred cccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHh--hCCCchhhhcCccc
Q 041479 680 NQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKM--ALPDQILQVLDPLF 742 (771)
Q Consensus 680 ~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 742 (771)
.....|++.|+||| +||++||+++|+.||.+.... .....+... .........+++.+
T Consensus 158 ----~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (285)
T cd05632 158 ----IRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEK-VKREEVDRRVLETEEVYSAKFSEEA 232 (285)
T ss_pred ----ccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhhhccccccCccCCHHH
Confidence 12346899999999 699999999999999753211 111111111 11122333344555
Q ss_pred cccCcccChhchhhcCC-----HHHHHH
Q 041479 743 LVGGVQEGEETAEENIK-----KGQIRE 765 (771)
Q Consensus 743 ~~~~~~cl~~~p~~Rpt-----~~~vl~ 765 (771)
.....+|++.||++||+ +.++++
T Consensus 233 ~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05632 233 KSICKMLLTKDPKQRLGCQEEGAGEVKR 260 (285)
T ss_pred HHHHHHHccCCHhHcCCCcccChHHHHc
Confidence 56667999999999999 556654
No 208
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.97 E-value=8.9e-30 Score=265.58 Aligned_cols=229 Identities=22% Similarity=0.294 Sum_probs=178.7
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeeccch---------hhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCcee
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLHQR---------GALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYF 597 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~---------~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 597 (771)
..+|+|.+|.||+|....+++.||+|.+..... ...+.+.+|++++++++||||+++++++.+.+ .
T Consensus 6 ~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~ 80 (267)
T cd06628 6 ALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDAD-----H 80 (267)
T ss_pred ceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCC-----c
Confidence 457899999999999988888999998854321 22367889999999999999999999988766 6
Q ss_pred EEEEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccC
Q 041479 598 RALVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIP 674 (771)
Q Consensus 598 ~~lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~ 674 (771)
.++||||+++++|.++ ...+++..+..++.|++.|++|||+. +++||||||+||++++++.+||+|||.++...
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~ 157 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANILVDNKGGIKISDFGISKKLE 157 (267)
T ss_pred cEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEEEcCCCCEEecccCCCcccc
Confidence 7999999999999766 34578888999999999999999985 89999999999999999999999999998665
Q ss_pred cccCCc--ccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhh
Q 041479 675 EVMSSN--QCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQV 737 (771)
Q Consensus 675 ~~~~~~--~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 737 (771)
...... ........|++.|+||| +||++||+++|+.||.+.... ....... .......+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-~~~~~~~-~~~~~~~~~~ 235 (267)
T cd06628 158 ANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQL-QAIFKIG-ENASPEIPSN 235 (267)
T ss_pred cccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHH-HHHHHHh-ccCCCcCCcc
Confidence 321110 11112345889999999 699999999999999753211 1111111 1222333444
Q ss_pred cCccccccCcccChhchhhcCCHHHHHH
Q 041479 738 LDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 738 ~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
++..+.....+||++||++||++.++++
T Consensus 236 ~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 236 ISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred cCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 5555666677999999999999999986
No 209
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.97 E-value=9e-30 Score=270.80 Aligned_cols=233 Identities=23% Similarity=0.301 Sum_probs=179.9
Q ss_pred ccccccccccceEEEEEecCCCe----EEEEEEeeccc-hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEE
Q 041479 525 LNVSYESLVKATVYKGILDLDQT----FIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRA 599 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~~~~----~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 599 (771)
....+|+|.+|.||+|++..+++ .||+|.+.... .....++.+|+.++++++||||++++++|.... .+
T Consensus 11 ~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~------~~ 84 (303)
T cd05110 11 RVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPT------IQ 84 (303)
T ss_pred eccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCCC------ce
Confidence 34468999999999999876664 47888885432 333457899999999999999999999986543 47
Q ss_pred EEEEeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCc
Q 041479 600 LVYEFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPE 675 (771)
Q Consensus 600 lv~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~ 675 (771)
+++||+++|+|.++ ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 85 ~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~ 161 (303)
T cd05110 85 LVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEG 161 (303)
T ss_pred eeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhc---CeeccccccceeeecCCCceEEccccccccccC
Confidence 99999999999766 23578889999999999999999985 899999999999999999999999999986543
Q ss_pred ccCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhhhcC
Q 041479 676 VMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQVLD 739 (771)
Q Consensus 676 ~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 739 (771)
... .....+..++..|+||| |||++||+++ |..||.+... ....++.........+...+
T Consensus 162 ~~~--~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~ 237 (303)
T cd05110 162 DEK--EYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPT--REIPDLLEKGERLPQPPICT 237 (303)
T ss_pred ccc--ccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHHCCCCCCCCCCCC
Confidence 221 11122334677899999 6999999998 8999865321 22334443333222233344
Q ss_pred ccccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 740 PLFLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 740 ~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
..+.....+||..+|++||+++++++.|+++
T Consensus 238 ~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~ 268 (303)
T cd05110 238 IDVYMVMVKCWMIDADSRPKFKELAAEFSRM 268 (303)
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 4555566799999999999999999999875
No 210
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.97 E-value=6.6e-30 Score=265.82 Aligned_cols=220 Identities=20% Similarity=0.286 Sum_probs=168.9
Q ss_pred cccccccceEEEEEecCC------------CeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCc
Q 041479 528 SYESLVKATVYKGILDLD------------QTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGN 595 (771)
Q Consensus 528 ~l~~~~~~~Vy~~~~~~~------------~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~ 595 (771)
.+|+|.+|.||+|++... ...||+|.+........+.|.+|+.+++.++||||+++++++....
T Consensus 2 ~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~---- 77 (262)
T cd05077 2 HLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDV---- 77 (262)
T ss_pred ccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCC----
Confidence 368999999999986432 2368999987665556678999999999999999999999987765
Q ss_pred eeEEEEEEeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCc-------eEE
Q 041479 596 YFRALVYEFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMT-------AHM 664 (771)
Q Consensus 596 ~~~~lv~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~-------~kl 664 (771)
..++||||+++|+|..+ ...+++..+..++.|+++|++|||+. +|+||||||+||+++.++. +|+
T Consensus 78 -~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~~~~~~~~~l 153 (262)
T cd05077 78 -ENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKNILLAREGIDGECGPFIKL 153 (262)
T ss_pred -CCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCcccEEEecCCccCCCCceeEe
Confidence 56899999999998655 23588999999999999999999985 9999999999999986654 899
Q ss_pred ecccCccccCcccCCcccccccccccccccchh----------------HHHHHHHHH-hCCCCCCccccCCccHHHHHH
Q 041479 665 GDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE----------------YGILLLEIF-TGKRPTSDMFTEGLDLHNFVK 727 (771)
Q Consensus 665 ~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~-tg~~P~~~~~~~~~~~~~~~~ 727 (771)
+|||++...... ....|+..||||| |||++|||+ +|+.|+.+.... .......
T Consensus 154 ~d~g~~~~~~~~--------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~--~~~~~~~ 223 (262)
T cd05077 154 SDPGIPITVLSR--------QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLA--EKERFYE 223 (262)
T ss_pred CCCCCCccccCc--------ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchh--HHHHHHh
Confidence 999998754321 1234788899999 699999998 588887643211 1111111
Q ss_pred hhCCCchhhhcCccccccCcccChhchhhcCCHHHHHHHH
Q 041479 728 MALPDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRESL 767 (771)
Q Consensus 728 ~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L 767 (771)
...+ .....++.+...+.+||+.||++||++.++++.+
T Consensus 224 ~~~~--~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 224 GQCM--LVTPSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred cCcc--CCCCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 1111 1111223444566799999999999999999876
No 211
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=99.97 E-value=1.1e-29 Score=263.06 Aligned_cols=228 Identities=28% Similarity=0.368 Sum_probs=182.3
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
+.....+|.|.+|.||+|... ++.||||.+..... ..+++.+|+.++++++|+||+++++++.+.+ ..++||
T Consensus 8 ~~~~~~ig~g~~g~v~~~~~~--~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-----~~~~v~ 79 (256)
T cd05039 8 LKLGATIGKGEFGDVMLGDYR--GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGN-----PLYIVT 79 (256)
T ss_pred ccceeeeecCCCceEEEEEec--CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCC-----CeEEEE
Confidence 334556899999999999875 55899999965543 5678999999999999999999999987755 679999
Q ss_pred EeccCCCCCCCc-----ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCccc
Q 041479 603 EFMHHGSLESCP-----RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVM 677 (771)
Q Consensus 603 e~~~~g~L~~~~-----~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~ 677 (771)
||+++++|.++. ..+++..+..++.|++.|+.|||+. +++||||||+||+++.++.+||+|||.++......
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~ 156 (256)
T cd05039 80 EYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQ 156 (256)
T ss_pred EecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEEEeCCCCEEEccccccccccccc
Confidence 999999997761 2578999999999999999999985 99999999999999999999999999998653221
Q ss_pred CCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhhhcCcc
Q 041479 678 SSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPL 741 (771)
Q Consensus 678 ~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 741 (771)
. ...++..|+||| +|+++||+++ |+.||..... ..+.+......+...+..+++.
T Consensus 157 ~-------~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 227 (256)
T cd05039 157 D-------SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL--KDVVPHVEKGYRMEAPEGCPPE 227 (256)
T ss_pred c-------cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCH--HHHHHHHhcCCCCCCccCCCHH
Confidence 1 123466799999 6999999998 9999865321 1233333333333334445566
Q ss_pred ccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 742 FLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 742 ~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
+.....+|+..+|++|||+.|+++.|+.+
T Consensus 228 ~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 228 VYKVMKDCWELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred HHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence 66677799999999999999999999864
No 212
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.97 E-value=6.8e-30 Score=272.56 Aligned_cols=228 Identities=22% Similarity=0.322 Sum_probs=173.0
Q ss_pred cccccccccccceEEEEEecCCCeEEEEEEeeccc-hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEE
Q 041479 524 LLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 524 ~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
.....+|+|.+|+||+|+.+.+++.||+|.++... ......+.+|++++++++||||+++++++...+ ..++||
T Consensus 9 ~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~~lv~ 83 (309)
T cd07872 9 IKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDK-----SLTLVF 83 (309)
T ss_pred EEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCC-----eEEEEE
Confidence 34456899999999999999888899999996543 233457889999999999999999999988766 689999
Q ss_pred EeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccC
Q 041479 603 EFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMS 678 (771)
Q Consensus 603 e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 678 (771)
||+++ ++.+. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 84 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 159 (309)
T cd07872 84 EYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSVPTK 159 (309)
T ss_pred eCCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECccccceecCCCcc
Confidence 99975 66543 33478888999999999999999985 999999999999999999999999999975432211
Q ss_pred Ccccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHH---------------
Q 041479 679 SNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVK--------------- 727 (771)
Q Consensus 679 ~~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~--------------- 727 (771)
......+|+.|+||| +||++|||+||+.||.+....+ .+.....
T Consensus 160 ----~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 234 (309)
T cd07872 160 ----TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVED-ELHLIFRLLGTPTEETWPGISS 234 (309)
T ss_pred ----ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCCHHHHhhhcc
Confidence 112245789999999 6999999999999996432111 0111110
Q ss_pred ------hhCCC-------chhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 728 ------MALPD-------QILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 728 ------~~~~~-------~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
...+. .....+++.......+|++.||.+|||+.|+++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 285 (309)
T cd07872 235 NDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK 285 (309)
T ss_pred hhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence 00110 001123444445566999999999999999985
No 213
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=6e-31 Score=257.52 Aligned_cols=232 Identities=20% Similarity=0.230 Sum_probs=182.0
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccC-CCCceeEEEEeecCCCCCceeEEEEEEe
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIR-HRNLVKIITACSTSDFQGNYFRALVYEF 604 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~~~~~~lv~e~ 604 (771)
..-+|+|.+|.|.-++...++.+||||++.......+.+..+|++++.+++ |+||+.|+++|+++. ..|+|||-
T Consensus 83 ~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~-----~FYLVfEK 157 (463)
T KOG0607|consen 83 SELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDT-----RFYLVFEK 157 (463)
T ss_pred HHHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccc-----eEEEEEec
Confidence 345899999999999999999999999998777777889999999999996 999999999988876 78999999
Q ss_pred ccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCC---ceEEecccCccccCcccC
Q 041479 605 MHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDM---TAHMGDFGLTRFIPEVMS 678 (771)
Q Consensus 605 ~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~---~~kl~DfGla~~~~~~~~ 678 (771)
|.||.|-++ .+.+++.++.+++.+||.||.|||.. ||.|||+||+|||-.+.. -+|||||.++..+.....
T Consensus 158 m~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~k---gIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~ 234 (463)
T KOG0607|consen 158 MRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTK---GIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNND 234 (463)
T ss_pred ccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhc---CcccccCCccceeecCCCCcCceeeeccccccccccCCC
Confidence 999999766 45689999999999999999999984 999999999999996543 489999998865433221
Q ss_pred C---cccccccccccccccchh--------------------HHHHHHHHHhCCCCCCcc------ccCCcc--------
Q 041479 679 S---NQCSSVGLKGTVGYATPE--------------------YGILLLEIFTGKRPTSDM------FTEGLD-------- 721 (771)
Q Consensus 679 ~---~~~~~~~~~gt~~y~aPE--------------------~Gv~l~el~tg~~P~~~~------~~~~~~-------- 721 (771)
- ......+.+|+..||||| +||++|-|++|+.||.+. |..|..
T Consensus 235 ~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~L 314 (463)
T KOG0607|consen 235 CSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKL 314 (463)
T ss_pred CCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHH
Confidence 1 122234678999999999 599999999999999764 333321
Q ss_pred HHHHHHhh--CCCchhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 722 LHNFVKMA--LPDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 722 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
+..+..+. +|+..+..++..-+......+..||.+|.++.++++
T Consensus 315 FesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 315 FESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred HHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence 11122222 234444444444444455777899999999888775
No 214
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.97 E-value=8.9e-30 Score=268.03 Aligned_cols=237 Identities=20% Similarity=0.211 Sum_probs=180.6
Q ss_pred ccccccccceEEEEEecC----CCeEEEEEEeeccchh-hHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEE
Q 041479 527 VSYESLVKATVYKGILDL----DQTFIAVKVLFLHQRG-ALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALV 601 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~----~~~~vAvK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv 601 (771)
..+|+|.+|+||+|++.. +++.||||++...... ..+.|.+|++++++++||||+++++++...+. ...++|
T Consensus 10 ~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~---~~~~lv 86 (284)
T cd05038 10 KQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGG---RSLRLI 86 (284)
T ss_pred eeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCC---CceEEE
Confidence 457999999999999754 3679999999755443 56789999999999999999999999866331 267999
Q ss_pred EEeccCCCCCCCc----ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCccc
Q 041479 602 YEFMHHGSLESCP----RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVM 677 (771)
Q Consensus 602 ~e~~~~g~L~~~~----~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~ 677 (771)
|||+++++|.++. ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.+|++|||.+.......
T Consensus 87 ~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 163 (284)
T cd05038 87 MEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNILVESEDLVKISDFGLAKVLPEDK 163 (284)
T ss_pred EecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccccccccccCC
Confidence 9999999997762 2488999999999999999999985 89999999999999999999999999998765322
Q ss_pred CCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCc-------------cHHHHHHhh
Q 041479 678 SSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGL-------------DLHNFVKMA 729 (771)
Q Consensus 678 ~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~-------------~~~~~~~~~ 729 (771)
... .......++..|+||| ||+++|||++|+.|+........ .+.++....
T Consensus 164 ~~~-~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (284)
T cd05038 164 DYY-YVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEG 242 (284)
T ss_pred cce-eccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHHcC
Confidence 211 1111223556799999 69999999999999864322111 112222222
Q ss_pred CCCchhhhcCccccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 730 LPDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 730 ~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
.....+..+...+..++.+||..+|++||||.||+++|+++
T Consensus 243 ~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 243 ERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred CcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 22222223334455666799999999999999999999986
No 215
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.97 E-value=1.3e-29 Score=261.80 Aligned_cols=229 Identities=25% Similarity=0.310 Sum_probs=179.4
Q ss_pred cccccccceEEEEEecCCCeEEEEEEeeccch-hhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEecc
Q 041479 528 SYESLVKATVYKGILDLDQTFIAVKVLFLHQR-GALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMH 606 (771)
Q Consensus 528 ~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~~~ 606 (771)
.+|+|.+|.||++.+.. ++.||+|.+..... ...+.+.+|++++++++||||+++++++.+.. ..++||||++
T Consensus 2 ~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-----~~~~v~e~~~ 75 (251)
T cd05041 2 KIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQ-----PIYIVMELVP 75 (251)
T ss_pred ccccCCCceEEEEEEeC-CCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCC-----CeEEEEEcCC
Confidence 36899999999999887 77999999865433 35678999999999999999999999988776 6799999999
Q ss_pred CCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCccc
Q 041479 607 HGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQC 682 (771)
Q Consensus 607 ~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 682 (771)
+++|.++ ...+++..+..++.+++.|++|||+. +++||||||+||+++.++.+|++|||+++....... ..
T Consensus 76 ~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~--~~ 150 (251)
T cd05041 76 GGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIY--TV 150 (251)
T ss_pred CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEcCCCcEEEeeccccccccCCcc--ee
Confidence 9999765 23578888999999999999999986 899999999999999999999999999986542211 11
Q ss_pred ccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhhhcCccccccC
Q 041479 683 SSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFLVGG 746 (771)
Q Consensus 683 ~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 746 (771)
......++..|+||| +||++||++| |..||..... ....+......+...++..+..+...+
T Consensus 151 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~li 228 (251)
T cd05041 151 SDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSN--QQTRERIESGYRMPAPQLCPEEIYRLM 228 (251)
T ss_pred ccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCH--HHHHHHHhcCCCCCCCccCCHHHHHHH
Confidence 111123466799999 6999999999 8888865321 123333333222223344455666677
Q ss_pred cccChhchhhcCCHHHHHHHHHH
Q 041479 747 VQEGEETAEENIKKGQIRESLIA 769 (771)
Q Consensus 747 ~~cl~~~p~~Rpt~~~vl~~L~~ 769 (771)
.+|+..+|++|||+.|+++.|++
T Consensus 229 ~~~l~~~p~~Rp~~~ell~~l~~ 251 (251)
T cd05041 229 LQCWAYDPENRPSFSEIYNELQI 251 (251)
T ss_pred HHHhccChhhCcCHHHHHHHhhC
Confidence 79999999999999999999873
No 216
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.97 E-value=1.4e-29 Score=267.22 Aligned_cols=233 Identities=22% Similarity=0.222 Sum_probs=176.0
Q ss_pred cccccccccceEEEEEecC-----CCeEEEEEEeeccc-hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEE
Q 041479 526 NVSYESLVKATVYKGILDL-----DQTFIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRA 599 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~-----~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 599 (771)
...+|+|.+|.||+|..++ .+..||||.+.... .....++.+|+.++++++||||+++++++.+.+ ..|
T Consensus 11 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-----~~~ 85 (288)
T cd05061 11 LRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQ-----PTL 85 (288)
T ss_pred eeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC-----CcE
Confidence 4568999999999997653 24589999885443 233457889999999999999999999987765 579
Q ss_pred EEEEeccCCCCCCCcc-------------cCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEec
Q 041479 600 LVYEFMHHGSLESCPR-------------ILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGD 666 (771)
Q Consensus 600 lv~e~~~~g~L~~~~~-------------~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~D 666 (771)
+||||+++|+|.++.+ ..++..+..++.|++.||+|||+. +|+||||||+||++++++.+|++|
T Consensus 86 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nili~~~~~~~L~D 162 (288)
T cd05061 86 VVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGD 162 (288)
T ss_pred EEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEEEcCCCcEEECc
Confidence 9999999999976621 234567788999999999999985 999999999999999999999999
Q ss_pred ccCccccCcccCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhC
Q 041479 667 FGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMAL 730 (771)
Q Consensus 667 fGla~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~ 730 (771)
||+++....... ........++..|+||| +||++||+++ |+.||.+.... ...+......
T Consensus 163 fg~~~~~~~~~~--~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~--~~~~~~~~~~ 238 (288)
T cd05061 163 FGMTRDIYETDY--YRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE--QVLKFVMDGG 238 (288)
T ss_pred CCcccccccccc--ccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCC
Confidence 999986543221 11111223567899999 6999999999 78888653221 1222221111
Q ss_pred CCchhhhcCccccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 731 PDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 731 ~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
....+...++.+.....+|++.||++|||+.++++.|++.
T Consensus 239 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~ 278 (288)
T cd05061 239 YLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 278 (288)
T ss_pred CCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhh
Confidence 1122233345566677799999999999999999999874
No 217
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.97 E-value=5.5e-30 Score=280.52 Aligned_cols=232 Identities=18% Similarity=0.136 Sum_probs=173.5
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeecc--chhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEE
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLH--QRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYE 603 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e 603 (771)
...+|+|.+|+||+|+...+++.||||++... .....+++.+|+++++.++||||+++++++...+.......|+|||
T Consensus 5 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 84 (372)
T cd07853 5 DRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYVVTE 84 (372)
T ss_pred cceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEEEEee
Confidence 34589999999999999888889999998543 2334568899999999999999999999987654222235799999
Q ss_pred eccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCc
Q 041479 604 FMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSN 680 (771)
Q Consensus 604 ~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 680 (771)
|+. ++|.+. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 85 ~~~-~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~-- 158 (372)
T cd07853 85 LMQ-SDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDES-- 158 (372)
T ss_pred ccc-cCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEEECCCCCEEeccccceeecccCcc--
Confidence 997 466443 34688999999999999999999986 899999999999999999999999999986533221
Q ss_pred ccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHH-----------------
Q 041479 681 QCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVK----------------- 727 (771)
Q Consensus 681 ~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~----------------- 727 (771)
.......+|+.|+||| +||++|||++|+.||.+..... .+..+..
T Consensus 159 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~~g~~~~~~~~~~~~~~ 236 (372)
T cd07853 159 -KHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQ-QLDLITDLLGTPSLEAMRSACEGA 236 (372)
T ss_pred -ccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHH-HHHHHHHHcCCCCHHHHHHhhHHH
Confidence 1122346889999999 6999999999999996432110 0000000
Q ss_pred -----h-hC-CCc------hhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 728 -----M-AL-PDQ------ILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 728 -----~-~~-~~~------~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
. .. +.. .....++.+.....+|++.||++|||+.|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~ 287 (372)
T cd07853 237 RAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALA 287 (372)
T ss_pred HHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhc
Confidence 0 00 010 11112333444566999999999999999985
No 218
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.97 E-value=8.2e-30 Score=269.63 Aligned_cols=227 Identities=24% Similarity=0.232 Sum_probs=179.7
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEec
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFM 605 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~~ 605 (771)
...+|.|.+|.||+|++..+++.||+|.+........+.+.+|+.+++.++||||+++++++.... ..|+||||+
T Consensus 17 ~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~lv~e~~ 91 (292)
T cd06644 17 IGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDG-----KLWIMIEFC 91 (292)
T ss_pred hheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCC-----eEEEEEecC
Confidence 445899999999999999988899999997776666788999999999999999999999987765 689999999
Q ss_pred cCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCcc
Q 041479 606 HHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQ 681 (771)
Q Consensus 606 ~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 681 (771)
+++++..+ ...+++..+..++.|++.|++|||+. +|+|||+||+||+++.++.+||+|||++.......
T Consensus 92 ~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~---- 164 (292)
T cd06644 92 PGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTL---- 164 (292)
T ss_pred CCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcceEEEcCCCCEEEccCccceeccccc----
Confidence 99998654 34578999999999999999999985 99999999999999999999999999987543221
Q ss_pred cccccccccccccchh--------------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCC-CchhhhcCc
Q 041479 682 CSSVGLKGTVGYATPE--------------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALP-DQILQVLDP 740 (771)
Q Consensus 682 ~~~~~~~gt~~y~aPE--------------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 740 (771)
.......|++.|+||| +||++|||++|+.||.+.... ....++.....+ ......++.
T Consensus 165 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 243 (292)
T cd06644 165 QRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM-RVLLKIAKSEPPTLSQPSKWSM 243 (292)
T ss_pred cccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHH-HHHHHHhcCCCccCCCCcccCH
Confidence 1122345788999998 699999999999998653211 112222222111 112223344
Q ss_pred cccccCcccChhchhhcCCHHHHHH
Q 041479 741 LFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 741 ~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
.+.....+||..+|++||++.++++
T Consensus 244 ~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 244 EFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred HHHHHHHHHhcCCcccCcCHHHHhc
Confidence 4555667999999999999999975
No 219
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.97 E-value=8.8e-30 Score=263.72 Aligned_cols=227 Identities=18% Similarity=0.144 Sum_probs=179.7
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeecc-chhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEe
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLH-QRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEF 604 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~ 604 (771)
...+|+|.+|.||++.+..+++.||+|.++.. .....+.+.+|+.++++++||||+++++++.+.+ ..|+||||
T Consensus 5 ~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~lv~e~ 79 (255)
T cd08219 5 LRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADG-----HLYIVMEY 79 (255)
T ss_pred EEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECC-----EEEEEEee
Confidence 34589999999999999988899999998643 2345678889999999999999999999988776 78999999
Q ss_pred ccCCCCCCC-----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCC
Q 041479 605 MHHGSLESC-----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSS 679 (771)
Q Consensus 605 ~~~g~L~~~-----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 679 (771)
+++|++.+. ...+++.....++.|++.|+.|||+. +|+|+||||+||++++++.++++|||.++.......
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~- 155 (255)
T cd08219 80 CDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGA- 155 (255)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEECCCCcEEEcccCcceeeccccc-
Confidence 999998654 23478888999999999999999985 999999999999999999999999999976543221
Q ss_pred cccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCccccc
Q 041479 680 NQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFLV 744 (771)
Q Consensus 680 ~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 744 (771)
......|++.|+||| +|+++|+|++|+.||..... ...............+..++..+..
T Consensus 156 ---~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (255)
T cd08219 156 ---YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSW--KNLILKVCQGSYKPLPSHYSYELRS 230 (255)
T ss_pred ---ccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCH--HHHHHHHhcCCCCCCCcccCHHHHH
Confidence 112345889999999 69999999999999964211 1111111112222233444555556
Q ss_pred cCcccChhchhhcCCHHHHHHH
Q 041479 745 GGVQEGEETAEENIKKGQIRES 766 (771)
Q Consensus 745 ~~~~cl~~~p~~Rpt~~~vl~~ 766 (771)
...+||..||++|||+.+++..
T Consensus 231 li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 231 LIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred HHHHHHhCCcccCCCHHHHhhc
Confidence 6679999999999999999864
No 220
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.97 E-value=9.7e-30 Score=266.06 Aligned_cols=230 Identities=22% Similarity=0.236 Sum_probs=176.4
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhcc-CCCCceeEEEEeecCCCCC-ceeEEEEEEe
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNI-RHRNLVKIITACSTSDFQG-NYFRALVYEF 604 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~-~~~~~lv~e~ 604 (771)
..+|+|.+|+||+|.+..+++.||+|++.... .....+..|+.+++++ +||||+++++++......+ ....|+||||
T Consensus 12 ~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e~ 90 (272)
T cd06637 12 ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEF 90 (272)
T ss_pred HheeecCCeEEEEEEEcCCCcEEEEEEEEcCC-ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCCcEEEEEEEc
Confidence 45799999999999999999999999996543 3346788999999998 6999999999987643221 2367999999
Q ss_pred ccCCCCCCC-----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCC
Q 041479 605 MHHGSLESC-----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSS 679 (771)
Q Consensus 605 ~~~g~L~~~-----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 679 (771)
+++|+|.++ ...+++..+..++.|++.|++|||+. +|+|||+||+||++++++.+||+|||+++.......
T Consensus 91 ~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~~~~- 166 (272)
T cd06637 91 CGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVG- 166 (272)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHEEECCCCCEEEccCCCceecccccc-
Confidence 999999765 23578899999999999999999985 899999999999999999999999999976533221
Q ss_pred cccccccccccccccchh--------------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcC
Q 041479 680 NQCSSVGLKGTVGYATPE--------------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLD 739 (771)
Q Consensus 680 ~~~~~~~~~gt~~y~aPE--------------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 739 (771)
......|++.|+||| +||++|||++|+.||.+...... .........+......++
T Consensus 167 ---~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 242 (272)
T cd06637 167 ---RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRA-LFLIPRNPAPRLKSKKWS 242 (272)
T ss_pred ---cCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHHH-HHHHhcCCCCCCCCCCcC
Confidence 123356899999999 59999999999999965322111 111111111111122233
Q ss_pred ccccccCcccChhchhhcCCHHHHHH
Q 041479 740 PLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 740 ~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
..+.....+||..+|.+|||+.++++
T Consensus 243 ~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 243 KKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred HHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 44555667999999999999999975
No 221
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.97 E-value=1.5e-29 Score=265.41 Aligned_cols=226 Identities=19% Similarity=0.240 Sum_probs=181.6
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeeccc-hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEec
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFM 605 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~~ 605 (771)
-.+|+|.+|.||+|++..+++.||||++.... ....+.+.+|++++++++||||+++++++.+.. ..|+||||+
T Consensus 10 ~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~lv~e~~ 84 (277)
T cd06640 10 ERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGT-----KLWIIMEYL 84 (277)
T ss_pred hhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC-----EEEEEEecC
Confidence 34799999999999999888899999987543 345678999999999999999999999998776 789999999
Q ss_pred cCCCCCCC--cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCcccc
Q 041479 606 HHGSLESC--PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCS 683 (771)
Q Consensus 606 ~~g~L~~~--~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 683 (771)
++|+|.++ ...+++.+...++.|++.|++|+|+. +++|+||+|+||+++.++.++++|||++........ .
T Consensus 85 ~~~~L~~~i~~~~l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~----~ 157 (277)
T cd06640 85 GGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI----K 157 (277)
T ss_pred CCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhhEEEcCCCCEEEcccccceeccCCcc----c
Confidence 99999776 34578888999999999999999985 999999999999999999999999999976543221 1
Q ss_pred cccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCccccccCcc
Q 041479 684 SVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFLVGGVQ 748 (771)
Q Consensus 684 ~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 748 (771)
.....++..|+||| |||++|||++|+.||.+..... .........++.....++..+.....+
T Consensus 158 ~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~li~~ 235 (277)
T cd06640 158 RNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMR--VLFLIPKNNPPTLTGEFSKPFKEFIDA 235 (277)
T ss_pred cccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHh--HhhhhhcCCCCCCchhhhHHHHHHHHH
Confidence 12245788999999 6999999999999997643221 222222222333444455555566779
Q ss_pred cChhchhhcCCHHHHHHH
Q 041479 749 EGEETAEENIKKGQIRES 766 (771)
Q Consensus 749 cl~~~p~~Rpt~~~vl~~ 766 (771)
||..+|++||++.++++.
T Consensus 236 ~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 236 CLNKDPSFRPTAKELLKH 253 (277)
T ss_pred HcccCcccCcCHHHHHhC
Confidence 999999999999999764
No 222
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.97 E-value=9.9e-30 Score=268.11 Aligned_cols=236 Identities=19% Similarity=0.169 Sum_probs=180.1
Q ss_pred cccccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhcc-CCCCceeEEEEeecCCCCCceeEEE
Q 041479 522 DLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNI-RHRNLVKIITACSTSDFQGNYFRAL 600 (771)
Q Consensus 522 ~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~~~~l 600 (771)
.+.....+|+|.+|+||+++.+.+++.||+|++.... ....++.+|+.+++++ +||||+++++++.....+.....++
T Consensus 19 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~l 97 (286)
T cd06638 19 TWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDVKNGDQLWL 97 (286)
T ss_pred ceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecccCCCCeEEE
Confidence 3445567899999999999999988899999885432 2346788899999999 6999999999986544333347899
Q ss_pred EEEeccCCCCCCC-------cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCcccc
Q 041479 601 VYEFMHHGSLESC-------PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673 (771)
Q Consensus 601 v~e~~~~g~L~~~-------~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~ 673 (771)
||||+++|+|.++ ...+++..+..++.|++.|+.|||+. +|+||||||+||+++.++.+|++|||+++..
T Consensus 98 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~kl~dfg~~~~~ 174 (286)
T cd06638 98 VLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNILLTTEGGVKLVDFGVSAQL 174 (286)
T ss_pred EEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHHhEEECCCCCEEEccCCceeec
Confidence 9999999999654 24577888999999999999999985 8999999999999999999999999998765
Q ss_pred CcccCCcccccccccccccccchh--------------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCC-C
Q 041479 674 PEVMSSNQCSSVGLKGTVGYATPE--------------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALP-D 732 (771)
Q Consensus 674 ~~~~~~~~~~~~~~~gt~~y~aPE--------------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~-~ 732 (771)
..... ......|++.|+||| +||++||+++|+.||.+..... .+........+ .
T Consensus 175 ~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~-~~~~~~~~~~~~~ 249 (286)
T cd06638 175 TSTRL----RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMR-ALFKIPRNPPPTL 249 (286)
T ss_pred ccCCC----ccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhH-HHhhccccCCCcc
Confidence 43211 122345899999998 5999999999999986532111 11111111111 1
Q ss_pred chhhhcCccccccCcccChhchhhcCCHHHHHHH
Q 041479 733 QILQVLDPLFLVGGVQEGEETAEENIKKGQIRES 766 (771)
Q Consensus 733 ~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~ 766 (771)
..+...+..+...+.+||+.||++|||+.|+++.
T Consensus 250 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 250 HQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred cCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 1222334455566779999999999999999874
No 223
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.97 E-value=1.7e-29 Score=266.16 Aligned_cols=238 Identities=23% Similarity=0.252 Sum_probs=179.4
Q ss_pred ccccccccceEEEEEe----cCCCeEEEEEEeeccc-hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEE
Q 041479 527 VSYESLVKATVYKGIL----DLDQTFIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALV 601 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~----~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv 601 (771)
..+|+|.+|.||.+.+ +.+++.||+|.+.... ....+++.+|++++++++||||+++++++...+.. ..++|
T Consensus 10 ~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~---~~~lv 86 (284)
T cd05079 10 RDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGN---GIKLI 86 (284)
T ss_pred eecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCC---ceEEE
Confidence 4579999999999985 3456799999986543 34457899999999999999999999998765321 57899
Q ss_pred EEeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCccc
Q 041479 602 YEFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVM 677 (771)
Q Consensus 602 ~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~ 677 (771)
|||+++++|.++ ...+++.++..++.|++.||+|+|+. +|+||||||+||+++.++.+|++|||+++......
T Consensus 87 ~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~ 163 (284)
T cd05079 87 MEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDK 163 (284)
T ss_pred EEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEEEcCCCCEEECCCccccccccCc
Confidence 999999999776 23578999999999999999999985 99999999999999999999999999998664332
Q ss_pred CCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCcccc----------CCccHHHHH---Hhh
Q 041479 678 SSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFT----------EGLDLHNFV---KMA 729 (771)
Q Consensus 678 ~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~----------~~~~~~~~~---~~~ 729 (771)
... .......|+..|+||| +||++||++|+..|...... ......... ...
T Consensus 164 ~~~-~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (284)
T cd05079 164 EYY-TVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLEEG 242 (284)
T ss_pred cce-eecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHHcC
Confidence 211 1112345677899999 69999999998776532111 011111111 111
Q ss_pred CCCchhhhcCccccccCcccChhchhhcCCHHHHHHHHHHhC
Q 041479 730 LPDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAIL 771 (771)
Q Consensus 730 ~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~l 771 (771)
........++..+.....+|++.+|++|||+.++++.+++++
T Consensus 243 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~~ 284 (284)
T cd05079 243 KRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAIL 284 (284)
T ss_pred ccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhhC
Confidence 111222334455556677999999999999999999999874
No 224
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.97 E-value=1.4e-29 Score=263.13 Aligned_cols=228 Identities=22% Similarity=0.314 Sum_probs=179.9
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEec
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFM 605 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~~ 605 (771)
...+|+|.+|+||+|..+++ +.||+|.+.... ...+++.+|++++++++||||+++++++.. + ..+++|||+
T Consensus 11 ~~~ig~G~~g~v~~~~~~~~-~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~-----~~~~v~e~~ 82 (260)
T cd05067 11 VKKLGAGQFGEVWMGYYNGH-TKVAIKSLKQGS-MSPEAFLAEANLMKQLQHPRLVRLYAVVTQ-E-----PIYIITEYM 82 (260)
T ss_pred eeeeccCccceEEeeecCCC-ceEEEEEecCCC-CcHHHHHHHHHHHHhcCCcCeeeEEEEEcc-C-----CcEEEEEcC
Confidence 44689999999999997655 589999986443 234689999999999999999999998643 2 469999999
Q ss_pred cCCCCCCC-----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCc
Q 041479 606 HHGSLESC-----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSN 680 (771)
Q Consensus 606 ~~g~L~~~-----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 680 (771)
++|+|.++ ...+++.++..++.|++.||+|||+. +++||||||+||++++++.++++|||++........
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~-- 157 (260)
T cd05067 83 ENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAANILVSETLCCKIADFGLARLIEDNEY-- 157 (260)
T ss_pred CCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHhEEEcCCCCEEEccCcceeecCCCCc--
Confidence 99999765 23578899999999999999999985 899999999999999999999999999976542221
Q ss_pred ccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhhhcCccccc
Q 041479 681 QCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFLV 744 (771)
Q Consensus 681 ~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 744 (771)
.......++..|+||| ||+++||+++ |+.||.+.. .....+......+.......+..+..
T Consensus 158 -~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (260)
T cd05067 158 -TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMT--NPEVIQNLERGYRMPRPDNCPEELYE 234 (260)
T ss_pred -ccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCC--hHHHHHHHHcCCCCCCCCCCCHHHHH
Confidence 1112334677899999 6999999999 999997542 22233333333333334444556666
Q ss_pred cCcccChhchhhcCCHHHHHHHHHH
Q 041479 745 GGVQEGEETAEENIKKGQIRESLIA 769 (771)
Q Consensus 745 ~~~~cl~~~p~~Rpt~~~vl~~L~~ 769 (771)
...+|+..+|++|||+.++++.|++
T Consensus 235 li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 235 LMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred HHHHHccCChhhCCCHHHHHHHhhc
Confidence 7779999999999999999999986
No 225
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=9e-31 Score=283.94 Aligned_cols=234 Identities=22% Similarity=0.292 Sum_probs=194.0
Q ss_pred cccccccccccceEEEEEecCCC----eEEEEEEeecc-chhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeE
Q 041479 524 LLNVSYESLVKATVYKGILDLDQ----TFIAVKVLFLH-QRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFR 598 (771)
Q Consensus 524 ~~~~~l~~~~~~~Vy~~~~~~~~----~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 598 (771)
...+.+|+|+||+||||.|-..+ .+||+|++... ..+...+++.|+-+|.+++|||++|++|+|.... .
T Consensus 699 kk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~------~ 772 (1177)
T KOG1025|consen 699 KKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST------L 772 (1177)
T ss_pred hhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch------H
Confidence 45678999999999999886544 47999998544 3456789999999999999999999999998765 5
Q ss_pred EEEEEeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccC
Q 041479 599 ALVYEFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIP 674 (771)
Q Consensus 599 ~lv~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~ 674 (771)
.||.+||+.|.|.++ ...+.....+.+..|||+|+.|||.+ ++|||||.++|||+.+-..+||.|||+|+.+.
T Consensus 773 qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRNVLVksP~hvkitdfgla~ll~ 849 (1177)
T KOG1025|consen 773 QLVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARNVLVKSPNHVKITDFGLAKLLA 849 (1177)
T ss_pred HHHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhheeecCCCeEEEEecchhhccC
Confidence 699999999999877 45677888999999999999999986 99999999999999999999999999999887
Q ss_pred cccCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhhhc
Q 041479 675 EVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQVL 738 (771)
Q Consensus 675 ~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 738 (771)
....... ..+..-.+.|||-| |||++||++| |..||+++... ++.+..+...+-..+++.
T Consensus 850 ~d~~ey~--~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~--eI~dlle~geRLsqPpiC 925 (1177)
T KOG1025|consen 850 PDEKEYS--APGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAE--EIPDLLEKGERLSQPPIC 925 (1177)
T ss_pred ccccccc--ccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHH--HhhHHHhccccCCCCCCc
Confidence 6554322 22333467799988 8999999999 99999887543 356666665555556666
Q ss_pred CccccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 739 DPLFLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 739 ~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
.-++..++.+||..|++.||+++++...+.++
T Consensus 926 tiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ 957 (1177)
T KOG1025|consen 926 TIDVYMVMVKCWMIDADSRPTFKELAEEFSRM 957 (1177)
T ss_pred cHHHHHHHHHHhccCcccCccHHHHHHHHHHH
Confidence 66677778899999999999999999888765
No 226
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.96 E-value=1.6e-29 Score=269.51 Aligned_cols=226 Identities=20% Similarity=0.251 Sum_probs=176.9
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeecc-chhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEe
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLH-QRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEF 604 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~ 604 (771)
...+|+|.+|.||++++..++..||+|.+... .....+++.+|++++.+++||||+++++++.+.+ ..++||||
T Consensus 6 ~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~~lv~ey 80 (308)
T cd06615 6 LGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDG-----EISICMEH 80 (308)
T ss_pred EeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCC-----EEEEEeec
Confidence 34579999999999999998889999998654 2334567899999999999999999999998776 78999999
Q ss_pred ccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCcc
Q 041479 605 MHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQ 681 (771)
Q Consensus 605 ~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 681 (771)
+++|+|.++ ...+++..+..++.|+++||.|||+. .+++||||||+||+++.++.+|++|||++.......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~---- 154 (308)
T cd06615 81 MDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM---- 154 (308)
T ss_pred cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhh--CCEEECCCChHHEEEecCCcEEEccCCCcccccccc----
Confidence 999999776 34578888999999999999999973 389999999999999999999999999987553321
Q ss_pred cccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHh------------------
Q 041479 682 CSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKM------------------ 728 (771)
Q Consensus 682 ~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~------------------ 728 (771)
.....|++.|+||| |||++||+++|+.||..... .....+...
T Consensus 155 --~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (308)
T cd06615 155 --ANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDA--KELEAMFGRPVSEGEAKESHRPVSGHP 230 (308)
T ss_pred --cccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcch--hhHHHhhcCccccccccCCcccccCCC
Confidence 12346899999999 69999999999999853211 011111100
Q ss_pred ------------------hCCCch-hhhcCccccccCcccChhchhhcCCHHHHHHH
Q 041479 729 ------------------ALPDQI-LQVLDPLFLVGGVQEGEETAEENIKKGQIRES 766 (771)
Q Consensus 729 ------------------~~~~~~-~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~ 766 (771)
..+... ...+++.+...+.+|+..+|++|||+.++++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 287 (308)
T cd06615 231 PDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKH 287 (308)
T ss_pred CCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000111 11234455566779999999999999999864
No 227
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.96 E-value=5.2e-30 Score=279.01 Aligned_cols=182 Identities=21% Similarity=0.212 Sum_probs=149.0
Q ss_pred ccccccccccceEEEEEecCCCeEEEEEEeecc--chhhHHHHHHHHHHHhccCCCCceeEEEEeecCCC-CCceeEEEE
Q 041479 525 LNVSYESLVKATVYKGILDLDQTFIAVKVLFLH--QRGALKSFMAECQALRNIRHRNLVKIITACSTSDF-QGNYFRALV 601 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~-~~~~~~~lv 601 (771)
....+|+|.+|+||++.....++.||||++... .....+++.+|+.+++.++||||+++++++..... ......|+|
T Consensus 21 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv 100 (355)
T cd07874 21 NLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEFQDVYLV 100 (355)
T ss_pred EEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccccccccceeEEE
Confidence 345689999999999999888889999999643 23345678899999999999999999998865431 112357999
Q ss_pred EEeccCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCcc
Q 041479 602 YEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQ 681 (771)
Q Consensus 602 ~e~~~~g~L~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 681 (771)
|||++++........+++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 101 ~e~~~~~l~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDikp~Nill~~~~~~kl~Dfg~~~~~~~~~---- 173 (355)
T cd07874 101 MELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF---- 173 (355)
T ss_pred hhhhcccHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEECCCCCEEEeeCcccccCCCcc----
Confidence 99997643333345678889999999999999999985 99999999999999999999999999998654322
Q ss_pred cccccccccccccchh---------------HHHHHHHHHhCCCCCCc
Q 041479 682 CSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSD 714 (771)
Q Consensus 682 ~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~ 714 (771)
......||+.|+||| +||++|||++|+.||.+
T Consensus 174 -~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 220 (355)
T cd07874 174 -MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 220 (355)
T ss_pred -ccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 122346899999999 69999999999999964
No 228
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.96 E-value=1.7e-29 Score=270.14 Aligned_cols=237 Identities=22% Similarity=0.311 Sum_probs=180.0
Q ss_pred cccccccccccccceEEEEEec-------CCCeEEEEEEeeccc-hhhHHHHHHHHHHHhcc-CCCCceeEEEEeecCCC
Q 041479 522 DLLLNVSYESLVKATVYKGILD-------LDQTFIAVKVLFLHQ-RGALKSFMAECQALRNI-RHRNLVKIITACSTSDF 592 (771)
Q Consensus 522 ~~~~~~~l~~~~~~~Vy~~~~~-------~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~ 592 (771)
.+.....+|+|.+|.||+|+.. .....||+|.+.... .....++..|+++++++ +||||+++++++...+
T Consensus 13 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~- 91 (314)
T cd05099 13 RLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEG- 91 (314)
T ss_pred HeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCC-
Confidence 3444567899999999999763 234579999986442 34456789999999999 6999999999987765
Q ss_pred CCceeEEEEEEeccCCCCCCCc-------------------ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCC
Q 041479 593 QGNYFRALVYEFMHHGSLESCP-------------------RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSN 653 (771)
Q Consensus 593 ~~~~~~~lv~e~~~~g~L~~~~-------------------~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~N 653 (771)
..|+||||+++|+|.++. ..+++.++..++.|++.||+|||+. +|+||||||+|
T Consensus 92 ----~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~N 164 (314)
T cd05099 92 ----PLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR---RCIHRDLAARN 164 (314)
T ss_pred ----ceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC---Ceeecccccee
Confidence 679999999999986541 2478888999999999999999985 99999999999
Q ss_pred eeeCCCCceEEecccCccccCcccCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCcccc
Q 041479 654 VLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFT 717 (771)
Q Consensus 654 ILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~ 717 (771)
|+++.++.+|++|||+++.......... .....++..||||| |||++||+++ |..||.+...
T Consensus 165 ill~~~~~~kL~Dfg~~~~~~~~~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~ 242 (314)
T cd05099 165 VLVTEDNVMKIADFGLARGVHDIDYYKK--TSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPV 242 (314)
T ss_pred EEEcCCCcEEEccccccccccccccccc--cccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCH
Confidence 9999999999999999986543221111 11123456799999 6999999999 8889865321
Q ss_pred CCccHHHHHHhhCCCchhhhcCccccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 718 EGLDLHNFVKMALPDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 718 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
..+.+.............++..+.....+||..+|++|||+.++++.|+++
T Consensus 243 --~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~ 293 (314)
T cd05099 243 --EELFKLLREGHRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKV 293 (314)
T ss_pred --HHHHHHHHcCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence 123333332222222333344555566799999999999999999999875
No 229
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=99.96 E-value=1.1e-29 Score=262.91 Aligned_cols=226 Identities=23% Similarity=0.274 Sum_probs=179.3
Q ss_pred ccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEe
Q 041479 525 LNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEF 604 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~ 604 (771)
....+|+|.+|.||+|+++.+++.||+|.+..... .+++.+|++++++++||||+++++++.+.. ..|+++||
T Consensus 7 ~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~-----~~~l~~e~ 79 (256)
T cd06612 7 ILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNT-----DLWIVMEY 79 (256)
T ss_pred hhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCC-----cEEEEEec
Confidence 34568899999999999998888999999865433 678999999999999999999999988775 78999999
Q ss_pred ccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCc
Q 041479 605 MHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSN 680 (771)
Q Consensus 605 ~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 680 (771)
+++++|.++ ...+++..+..++.|++.|+.|||+. +|+|||++|+||+++.++.+|++|||++........
T Consensus 80 ~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~-- 154 (256)
T cd06612 80 CGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMA-- 154 (256)
T ss_pred CCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEECCCCcEEEcccccchhcccCcc--
Confidence 999999765 34678999999999999999999986 899999999999999999999999999986543321
Q ss_pred ccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCC-CchhhhcCccccc
Q 041479 681 QCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALP-DQILQVLDPLFLV 744 (771)
Q Consensus 681 ~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 744 (771)
......|+..|+||| |||++|||++|+.||........ .........+ ......++..+..
T Consensus 155 --~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 231 (256)
T cd06612 155 --KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRA-IFMIPNKPPPTLSDPEKWSPEFND 231 (256)
T ss_pred --ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhh-hhhhccCCCCCCCchhhcCHHHHH
Confidence 112234788999999 69999999999999975422211 1111111111 1222334455556
Q ss_pred cCcccChhchhhcCCHHHHHH
Q 041479 745 GGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 745 ~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
...+||+.||++|||+.|+++
T Consensus 232 ~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 232 FVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred HHHHHHhcChhhCcCHHHHhc
Confidence 667999999999999999986
No 230
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=99.96 E-value=7.3e-30 Score=270.46 Aligned_cols=234 Identities=20% Similarity=0.241 Sum_probs=175.7
Q ss_pred ccccccccccceEEEEEecCC--------------CeEEEEEEeecc-chhhHHHHHHHHHHHhccCCCCceeEEEEeec
Q 041479 525 LNVSYESLVKATVYKGILDLD--------------QTFIAVKVLFLH-QRGALKSFMAECQALRNIRHRNLVKIITACST 589 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~~--------------~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~ 589 (771)
....+|+|.+|.||+++.... ...||||.+... .....++|.+|++++++++||||+++++++..
T Consensus 9 ~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~ 88 (295)
T cd05097 9 LKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLGVCVS 88 (295)
T ss_pred ehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEcC
Confidence 345689999999999987543 235999998654 23445689999999999999999999999877
Q ss_pred CCCCCceeEEEEEEeccCCCCCCCc---------------ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCe
Q 041479 590 SDFQGNYFRALVYEFMHHGSLESCP---------------RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNV 654 (771)
Q Consensus 590 ~~~~~~~~~~lv~e~~~~g~L~~~~---------------~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NI 654 (771)
.+ ..++||||+++++|.++. ..+++.++..++.|++.|++|||+. +++||||||+||
T Consensus 89 ~~-----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Ni 160 (295)
T cd05097 89 DD-----PLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFVHRDLATRNC 160 (295)
T ss_pred CC-----ccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---CeeccccChhhE
Confidence 66 679999999999986541 1367888999999999999999985 899999999999
Q ss_pred eeCCCCceEEecccCccccCcccCCcccccccccccccccchh---------------HHHHHHHHHh--CCCCCCcccc
Q 041479 655 LLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT--GKRPTSDMFT 717 (771)
Q Consensus 655 Ll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t--g~~P~~~~~~ 717 (771)
++++++.+|++|||+++....... ........+++.|+||| |||++|||++ |..||.....
T Consensus 161 ll~~~~~~kl~dfg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~ 238 (295)
T cd05097 161 LVGNHYTIKIADFGMSRNLYSGDY--YRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSD 238 (295)
T ss_pred EEcCCCcEEecccccccccccCcc--eeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccCh
Confidence 999999999999999976543221 11112234577899999 6999999998 5667764321
Q ss_pred CCccHHHHHH------hhCCCchhhhcCccccccCcccChhchhhcCCHHHHHHHHHH
Q 041479 718 EGLDLHNFVK------MALPDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIA 769 (771)
Q Consensus 718 ~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~ 769 (771)
. ..+..... ..........+++.+...+.+||+.||++||||.+|++.|++
T Consensus 239 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~~ 295 (295)
T cd05097 239 E-QVIENTGEFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLRE 295 (295)
T ss_pred H-HHHHHHHHhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhC
Confidence 1 11111111 001111223344556667779999999999999999999874
No 231
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.96 E-value=1.6e-29 Score=264.81 Aligned_cols=225 Identities=22% Similarity=0.262 Sum_probs=181.3
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeeccc-hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEec
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFM 605 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~~ 605 (771)
..+|+|.+|.||+|++..+++.||+|++.... ......+.+|++++++++||||+++++++.+.. ..|+|+||+
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~~v~e~~ 81 (274)
T cd06609 7 ECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGS-----KLWIIMEYC 81 (274)
T ss_pred hhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECC-----eEEEEEEee
Confidence 45789999999999999989999999996543 344567899999999999999999999988765 789999999
Q ss_pred cCCCCCCC--cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCcccc
Q 041479 606 HHGSLESC--PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCS 683 (771)
Q Consensus 606 ~~g~L~~~--~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 683 (771)
++++|.++ ...+++..+..++.|++.|+.|||+. +++||||+|+||++++++.++++|||+++....... .
T Consensus 82 ~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~----~ 154 (274)
T cd06609 82 GGGSCLDLLKPGKLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMS----K 154 (274)
T ss_pred CCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEcccccceeeccccc----c
Confidence 99999776 23689999999999999999999985 899999999999999999999999999987654321 1
Q ss_pred cccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhh-cCccccccCc
Q 041479 684 SVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQV-LDPLFLVGGV 747 (771)
Q Consensus 684 ~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 747 (771)
.....|++.|+||| |||++||++||+.||..... ...........++..... +++.+.....
T Consensus 155 ~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 232 (274)
T cd06609 155 RNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHP--MRVLFLIPKNNPPSLEGNKFSKPFKDFVS 232 (274)
T ss_pred cccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCch--HHHHHHhhhcCCCCCcccccCHHHHHHHH
Confidence 22345888999999 69999999999999965322 112222222223322222 5556666677
Q ss_pred ccChhchhhcCCHHHHHH
Q 041479 748 QEGEETAEENIKKGQIRE 765 (771)
Q Consensus 748 ~cl~~~p~~Rpt~~~vl~ 765 (771)
+||..+|++|||++++++
T Consensus 233 ~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 233 LCLNKDPKERPSAKELLK 250 (274)
T ss_pred HHhhCChhhCcCHHHHhh
Confidence 999999999999999975
No 232
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.96 E-value=5.3e-30 Score=267.62 Aligned_cols=229 Identities=25% Similarity=0.299 Sum_probs=177.4
Q ss_pred ccccccceEEEEEecCCC------eEEEEEEeeccc-hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEE
Q 041479 529 YESLVKATVYKGILDLDQ------TFIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALV 601 (771)
Q Consensus 529 l~~~~~~~Vy~~~~~~~~------~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv 601 (771)
+|+|.+|.||+|+..+.. +.||||.+.... ......+.+|+++++.++||||+++++++...+ ..++|
T Consensus 3 lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~~v 77 (269)
T cd05044 3 LGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNE-----PQYII 77 (269)
T ss_pred cccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCC-----CeEEE
Confidence 689999999999986533 689999885443 234578999999999999999999999987765 67999
Q ss_pred EEeccCCCCCCCc----------ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCC-----ceEEec
Q 041479 602 YEFMHHGSLESCP----------RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDM-----TAHMGD 666 (771)
Q Consensus 602 ~e~~~~g~L~~~~----------~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~-----~~kl~D 666 (771)
|||+++|+|.++. ..+++.++..++.|++.|++|||+. +++|+||||+||+++.++ .+|++|
T Consensus 78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~~~~~l~d 154 (269)
T cd05044 78 MELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDLAARNCLVSEKGYDADRVVKIGD 154 (269)
T ss_pred EeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCCChheEEEecCCCCCCcceEECC
Confidence 9999999997651 2367888999999999999999985 899999999999999877 899999
Q ss_pred ccCccccCcccCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhC
Q 041479 667 FGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMAL 730 (771)
Q Consensus 667 fGla~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~ 730 (771)
||+++........ .......++..|+||| |||++|||++ |+.||..... ...........
T Consensus 155 fg~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~--~~~~~~~~~~~ 230 (269)
T cd05044 155 FGLARDIYKSDYY--RKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNN--QEVLQHVTAGG 230 (269)
T ss_pred ccccccccccccc--ccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCH--HHHHHHHhcCC
Confidence 9999765432211 1111234577899999 6999999998 9999865322 12223322222
Q ss_pred CCchhhhcCccccccCcccChhchhhcCCHHHHHHHHHH
Q 041479 731 PDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIA 769 (771)
Q Consensus 731 ~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~ 769 (771)
.......++..+.....+||..+|++||++.++++.|++
T Consensus 231 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 269 (269)
T cd05044 231 RLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQN 269 (269)
T ss_pred ccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 222333445556667779999999999999999999874
No 233
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.96 E-value=1.2e-29 Score=263.59 Aligned_cols=229 Identities=23% Similarity=0.269 Sum_probs=182.2
Q ss_pred cccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEE
Q 041479 524 LLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYE 603 (771)
Q Consensus 524 ~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e 603 (771)
.....+|+|.+|.||+|....+++.||+|.+........+.+.+|++++++++||||+++++++...+ ..|++||
T Consensus 6 ~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-----~~~l~~e 80 (262)
T cd06613 6 ELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRD-----KLWIVME 80 (262)
T ss_pred EEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCC-----EEEEEEe
Confidence 34456899999999999998888899999998766556788999999999999999999999987766 7899999
Q ss_pred eccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCC
Q 041479 604 FMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSS 679 (771)
Q Consensus 604 ~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 679 (771)
|+++++|.++ ...+++.++..++.|++.|++|||+. +|+||||||+||++++++.+||+|||++........
T Consensus 81 ~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~- 156 (262)
T cd06613 81 YCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIA- 156 (262)
T ss_pred CCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEEECCCCCEEECccccchhhhhhhh-
Confidence 9999999765 25688999999999999999999985 899999999999999999999999999876543221
Q ss_pred cccccccccccccccchh------------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCC---chhhhc
Q 041479 680 NQCSSVGLKGTVGYATPE------------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPD---QILQVL 738 (771)
Q Consensus 680 ~~~~~~~~~gt~~y~aPE------------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 738 (771)
......|+..|+||| +||++|||++|+.||.+...... .........+. .....+
T Consensus 157 ---~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 232 (262)
T cd06613 157 ---KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRA-LFLISKSNFPPPKLKDKEKW 232 (262)
T ss_pred ---ccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHhccCCCccccchhhh
Confidence 112346788999999 59999999999999976432111 22222221111 112233
Q ss_pred CccccccCcccChhchhhcCCHHHHHH
Q 041479 739 DPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 739 ~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
+..+.....+||..+|++|||+.+++.
T Consensus 233 ~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 233 SPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred hHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 445556677999999999999999875
No 234
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.96 E-value=1.2e-29 Score=267.72 Aligned_cols=235 Identities=24% Similarity=0.279 Sum_probs=178.2
Q ss_pred ccccccccccccceEEEEEecC-----CCeEEEEEEeeccc-hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCce
Q 041479 523 LLLNVSYESLVKATVYKGILDL-----DQTFIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNY 596 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~-----~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~ 596 (771)
+.....+|+|.+|.||+|.++. ++..||+|++.... ....+++.+|++++++++||||+++++++...+
T Consensus 7 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~----- 81 (288)
T cd05050 7 IEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGK----- 81 (288)
T ss_pred ceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCC-----
Confidence 3344568999999999998753 45699999986543 334567999999999999999999999988765
Q ss_pred eEEEEEEeccCCCCCCCc-------------------------ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCC
Q 041479 597 FRALVYEFMHHGSLESCP-------------------------RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKP 651 (771)
Q Consensus 597 ~~~lv~e~~~~g~L~~~~-------------------------~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~ 651 (771)
..++||||+++|+|.++. ..+++.++..++.|++.||+|||+. +++||||||
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~---~i~H~dl~p 158 (288)
T cd05050 82 PMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVHRDLAT 158 (288)
T ss_pred ccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CeecccccH
Confidence 579999999999986552 1367788899999999999999985 899999999
Q ss_pred CCeeeCCCCceEEecccCccccCcccCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCcc
Q 041479 652 SNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDM 715 (771)
Q Consensus 652 ~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~ 715 (771)
+||+++.++.+|++|||+++....... ........+++.|+||| |||++|||++ |..||.+.
T Consensus 159 ~nil~~~~~~~~l~dfg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~ 236 (288)
T cd05050 159 RNCLVGENMVVKIADFGLSRNIYSADY--YKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGM 236 (288)
T ss_pred hheEecCCCceEECccccceecccCcc--ccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Confidence 999999999999999999875433221 11111223467799999 6999999998 88888643
Q ss_pred ccCCccHHHHHHhhCCCchhhhcCccccccCcccChhchhhcCCHHHHHHHHHH
Q 041479 716 FTEGLDLHNFVKMALPDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIA 769 (771)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~ 769 (771)
... ..............+...+..+...+.+|++.||++|||+.|+++.|++
T Consensus 237 ~~~--~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 237 AHE--EVIYYVRDGNVLSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred CHH--HHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 221 1222221111111223344556666779999999999999999999874
No 235
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.96 E-value=1.2e-29 Score=294.35 Aligned_cols=234 Identities=22% Similarity=0.236 Sum_probs=178.7
Q ss_pred cccccccccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEE
Q 041479 522 DLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRA 599 (771)
Q Consensus 522 ~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 599 (771)
.+.....+|.|.+|+||+|.+..+++.||+|++.... ......|..|+.++++++|||||++++++...... .+|
T Consensus 14 ~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~---~ly 90 (1021)
T PTZ00266 14 EYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQ---KLY 90 (1021)
T ss_pred CEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCC---EEE
Confidence 3444566899999999999999999999999986542 34457899999999999999999999988654322 679
Q ss_pred EEEEeccCCCCCCC-------cccCCHHHHHHHHHHHHHHHHHHHhcC----CCCeEecCCCCCCeeeCC----------
Q 041479 600 LVYEFMHHGSLESC-------PRILSFLRRLNIAIDVASALEYLHHHC----KKPIVHCDLKPSNVLLDN---------- 658 (771)
Q Consensus 600 lv~e~~~~g~L~~~-------~~~l~~~~~~~i~~~ia~gL~~LH~~~----~~~ivHrdlk~~NILl~~---------- 658 (771)
+||||+++|+|.++ ...+++..++.|+.||+.||+|||+.. ..+||||||||+|||++.
T Consensus 91 IVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~ 170 (1021)
T PTZ00266 91 ILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITA 170 (1021)
T ss_pred EEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccc
Confidence 99999999999765 245899999999999999999999852 136999999999999964
Q ss_pred -------CCceEEecccCccccCcccCCcccccccccccccccchh-----------------HHHHHHHHHhCCCCCCc
Q 041479 659 -------DMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE-----------------YGILLLEIFTGKRPTSD 714 (771)
Q Consensus 659 -------~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE-----------------~Gv~l~el~tg~~P~~~ 714 (771)
.+.+||+|||+++.+..... .....||+.|+||| |||++|||++|+.||..
T Consensus 171 ~~~n~ng~~iVKLsDFGlAr~l~~~s~-----~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~ 245 (1021)
T PTZ00266 171 QANNLNGRPIAKIGDFGLSKNIGIESM-----AHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHK 245 (1021)
T ss_pred cccccCCCCceEEccCCcccccccccc-----ccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCc
Confidence 23589999999986543211 12346899999999 69999999999999964
Q ss_pred cccCCccHHHHHHhhCCCchhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 715 MFTEGLDLHNFVKMALPDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
..... .+....... +.......++.+..++..||..+|.+|||+.+++.
T Consensus 246 ~~~~~-qli~~lk~~-p~lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 246 ANNFS-QLISELKRG-PDLPIKGKSKELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred CCcHH-HHHHHHhcC-CCCCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 32111 111212111 21111233455556677999999999999999983
No 236
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.96 E-value=5.7e-30 Score=271.41 Aligned_cols=226 Identities=19% Similarity=0.264 Sum_probs=179.5
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEec
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFM 605 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~~ 605 (771)
...+|+|.+|.||+|....+++.||||++........+.+.+|+.+++.++||||+++++++...+ ..|+||||+
T Consensus 26 ~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~-----~~~iv~e~~ 100 (297)
T cd06659 26 YIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGE-----ELWVLMEFL 100 (297)
T ss_pred hhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCC-----eEEEEEecC
Confidence 335899999999999998888899999997655555678899999999999999999999987766 789999999
Q ss_pred cCCCCCCC--cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCcccc
Q 041479 606 HHGSLESC--PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCS 683 (771)
Q Consensus 606 ~~g~L~~~--~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 683 (771)
++++|..+ ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++........ .
T Consensus 101 ~~~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~----~ 173 (297)
T cd06659 101 QGGALTDIVSQTRLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP----K 173 (297)
T ss_pred CCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeEEccCCcEEEeechhHhhcccccc----c
Confidence 99999766 34578999999999999999999986 899999999999999999999999999875443221 1
Q ss_pred cccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCC--CchhhhcCccccccC
Q 041479 684 SVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALP--DQILQVLDPLFLVGG 746 (771)
Q Consensus 684 ~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 746 (771)
.....|++.|+||| +||++|||++|+.||.... ............+ ......++..+....
T Consensus 174 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i 251 (297)
T cd06659 174 RKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDS--PVQAMKRLRDSPPPKLKNAHKISPVLRDFL 251 (297)
T ss_pred ccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHhccCCCCccccCCCCHHHHHHH
Confidence 22356899999999 6999999999999986421 1111222222111 112223344455566
Q ss_pred cccChhchhhcCCHHHHHH
Q 041479 747 VQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 747 ~~cl~~~p~~Rpt~~~vl~ 765 (771)
.+|++.+|++||++.++++
T Consensus 252 ~~~l~~~P~~Rps~~~ll~ 270 (297)
T cd06659 252 ERMLTREPQERATAQELLD 270 (297)
T ss_pred HHHhcCCcccCcCHHHHhh
Confidence 6999999999999999987
No 237
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.96 E-value=1.6e-29 Score=271.94 Aligned_cols=179 Identities=21% Similarity=0.180 Sum_probs=145.8
Q ss_pred cccc--ccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEe
Q 041479 529 YESL--VKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEF 604 (771)
Q Consensus 529 l~~~--~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~ 604 (771)
+|+| .+++||+++.+.+++.||||++.... ....+.+.+|+++++.++|||||++++++.+.+ ..++||||
T Consensus 6 ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~-----~~~lv~e~ 80 (327)
T cd08227 6 IGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADN-----ELWVVTSF 80 (327)
T ss_pred ccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECC-----EEEEEEec
Confidence 5666 67899999999999999999996542 334567778999999999999999999998776 78999999
Q ss_pred ccCCCCCCC-----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCC
Q 041479 605 MHHGSLESC-----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSS 679 (771)
Q Consensus 605 ~~~g~L~~~-----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 679 (771)
+++|+|.++ ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++++|||.+.........
T Consensus 81 ~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~ 157 (327)
T cd08227 81 MAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQR 157 (327)
T ss_pred cCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEEEecCCcEEEcccchhhcccccccc
Confidence 999999765 23488999999999999999999985 8999999999999999999999999875433211110
Q ss_pred c---ccccccccccccccchh-----------------HHHHHHHHHhCCCCCCcc
Q 041479 680 N---QCSSVGLKGTVGYATPE-----------------YGILLLEIFTGKRPTSDM 715 (771)
Q Consensus 680 ~---~~~~~~~~gt~~y~aPE-----------------~Gv~l~el~tg~~P~~~~ 715 (771)
. ........++..|+||| +||++||+++|+.||.+.
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 213 (327)
T cd08227 158 LRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDM 213 (327)
T ss_pred ccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCc
Confidence 0 00111234678899999 699999999999999753
No 238
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.96 E-value=9.1e-30 Score=268.43 Aligned_cols=226 Identities=19% Similarity=0.195 Sum_probs=180.0
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeecc-chhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEe
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLH-QRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEF 604 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~ 604 (771)
...+|+|.+|+||++++...++.||+|.+... .......+.+|++++++++||||+++++++...+ ..|+||||
T Consensus 6 ~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-----~~~lv~e~ 80 (286)
T cd06622 6 LDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEG-----AVYMCMEY 80 (286)
T ss_pred hhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCC-----eEEEEEee
Confidence 34679999999999999988889999998654 2334578999999999999999999999987765 78999999
Q ss_pred ccCCCCCCC--c----ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccC
Q 041479 605 MHHGSLESC--P----RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMS 678 (771)
Q Consensus 605 ~~~g~L~~~--~----~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 678 (771)
+++++|.++ . ..+++..+..++.|++.|+.|||+. .+|+||||||+||+++.++.+|++|||+++.......
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 158 (286)
T cd06622 81 MDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEE--HNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLA 158 (286)
T ss_pred cCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhc--CCEeeCCCCHHHEEECCCCCEEEeecCCcccccCCcc
Confidence 999999765 1 2688999999999999999999974 4899999999999999999999999999976533211
Q ss_pred Ccccccccccccccccchh---------------------HHHHHHHHHhCCCCCCccccCCccHHH--HHHhhCCCchh
Q 041479 679 SNQCSSVGLKGTVGYATPE---------------------YGILLLEIFTGKRPTSDMFTEGLDLHN--FVKMALPDQIL 735 (771)
Q Consensus 679 ~~~~~~~~~~gt~~y~aPE---------------------~Gv~l~el~tg~~P~~~~~~~~~~~~~--~~~~~~~~~~~ 735 (771)
....|++.|+||| +||++||+++|+.||....... .... ......+...+
T Consensus 159 ------~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~ 231 (286)
T cd06622 159 ------KTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYAN-IFAQLSAIVDGDPPTLP 231 (286)
T ss_pred ------ccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhh-HHHHHHHHhhcCCCCCC
Confidence 1235788999999 5999999999999996432111 1111 11122233344
Q ss_pred hhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 736 QVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 736 ~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
..++..+.....+||+.+|++||++.++++
T Consensus 232 ~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 261 (286)
T cd06622 232 SGYSDDAQDFVAKCLNKIPNRRPTYAQLLE 261 (286)
T ss_pred cccCHHHHHHHHHHcccCcccCCCHHHHhc
Confidence 446666767777999999999999999986
No 239
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.96 E-value=7.1e-30 Score=265.02 Aligned_cols=227 Identities=27% Similarity=0.332 Sum_probs=176.4
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeeccchhh--HHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEe
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGA--LKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEF 604 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~--~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~ 604 (771)
..+|+|.+|+||+++.+.+++.||+|++....... .....+|+.++++++||||+++++++.... ..++||||
T Consensus 5 ~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~-----~~~~v~~~ 79 (260)
T PF00069_consen 5 KKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDN-----YLYIVMEY 79 (260)
T ss_dssp EEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESS-----EEEEEEEE
T ss_pred EEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccccc-----cccccccc
Confidence 45899999999999999999999999997765332 234567999999999999999999998866 78999999
Q ss_pred ccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCcc
Q 041479 605 MHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQ 681 (771)
Q Consensus 605 ~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 681 (771)
+++++|.++ ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.++|+|||.+...... .
T Consensus 80 ~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~----~ 152 (260)
T PF00069_consen 80 CPGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLDENGEVKLIDFGSSVKLSEN----N 152 (260)
T ss_dssp ETTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEESTTSEEEESSGTTTEESTST----T
T ss_pred cccccccccccccccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccc----c
Confidence 999999765 35688999999999999999999996 9999999999999999999999999998754111 1
Q ss_pred cccccccccccccchh----------------HHHHHHHHHhCCCCCCcccc--CCccHHHHHHhhCCCch--hhhcCcc
Q 041479 682 CSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFT--EGLDLHNFVKMALPDQI--LQVLDPL 741 (771)
Q Consensus 682 ~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~--~~~~~~~~~~~~~~~~~--~~~~~~~ 741 (771)
.......++..|+||| +|+++|+|++|..||.+... ....+.+......+... .....+.
T Consensus 153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (260)
T PF00069_consen 153 ENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQSREKSEE 232 (260)
T ss_dssp SEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSHTTSHHH
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccccccchhHHH
Confidence 1223456899999999 69999999999999976411 01111111111111111 1111245
Q ss_pred ccccCcccChhchhhcCCHHHHHH
Q 041479 742 FLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 742 ~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
+.....+||+.||++|||+.++++
T Consensus 233 l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 233 LRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp HHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred HHHHHHHHccCChhHCcCHHHHhc
Confidence 555666999999999999999985
No 240
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.96 E-value=1.9e-29 Score=267.43 Aligned_cols=235 Identities=21% Similarity=0.220 Sum_probs=178.3
Q ss_pred ccccccccccccceEEEEEecCCC----------------eEEEEEEeeccc-hhhHHHHHHHHHHHhccCCCCceeEEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQ----------------TFIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIIT 585 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~----------------~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~ 585 (771)
+.....+|+|.+|.||+|++...+ ..||+|++.... ....+.+.+|++++++++||||+++++
T Consensus 7 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~ 86 (296)
T cd05051 7 LNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARLLG 86 (296)
T ss_pred CcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEEEE
Confidence 344567899999999999876533 568999986543 345678999999999999999999999
Q ss_pred EeecCCCCCceeEEEEEEeccCCCCCCCc--------------ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCC
Q 041479 586 ACSTSDFQGNYFRALVYEFMHHGSLESCP--------------RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKP 651 (771)
Q Consensus 586 ~~~~~~~~~~~~~~lv~e~~~~g~L~~~~--------------~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~ 651 (771)
++...+ ..++||||+++++|.++. ..+++..+..++.|++.||+|||+. +|+||||||
T Consensus 87 ~~~~~~-----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H~dlkp 158 (296)
T cd05051 87 VCTVDP-----PLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVHRDLAT 158 (296)
T ss_pred EEecCC-----CcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---Cccccccch
Confidence 987765 679999999999997651 1578899999999999999999985 899999999
Q ss_pred CCeeeCCCCceEEecccCccccCcccCCcccccccccccccccchh---------------HHHHHHHHHh--CCCCCCc
Q 041479 652 SNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT--GKRPTSD 714 (771)
Q Consensus 652 ~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t--g~~P~~~ 714 (771)
+||+++.++.+|++|||+++........ .......+++.||||| |||++||+++ |..||..
T Consensus 159 ~Nili~~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~ 236 (296)
T cd05051 159 RNCLVGKNYTIKIADFGMSRNLYSSDYY--RVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEH 236 (296)
T ss_pred hceeecCCCceEEccccceeecccCcce--eecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCC
Confidence 9999999999999999999765432211 1122334678899999 6999999998 6778754
Q ss_pred cccCCccHHHHHHhhC-----C--CchhhhcCccccccCcccChhchhhcCCHHHHHHHHHH
Q 041479 715 MFTEGLDLHNFVKMAL-----P--DQILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIA 769 (771)
Q Consensus 715 ~~~~~~~~~~~~~~~~-----~--~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~ 769 (771)
... ....+...... + ......++..+...+.+|++.||++|||+.++++.|++
T Consensus 237 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~~ 296 (296)
T cd05051 237 LTD--QQVIENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQR 296 (296)
T ss_pred cCh--HHHHHHHHhccccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhcC
Confidence 211 11112211110 0 11122233455566779999999999999999999864
No 241
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.96 E-value=2e-29 Score=261.33 Aligned_cols=225 Identities=24% Similarity=0.246 Sum_probs=180.4
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeeccc-----hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEE
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLHQ-----RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALV 601 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~-----~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv 601 (771)
..+|+|.+|.||+|+.+.+++.||+|.+.... ....+.+.+|++++++++||||+++++++.... ..++|
T Consensus 6 ~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-----~~~lv 80 (258)
T cd06632 6 ELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREED-----NLYIF 80 (258)
T ss_pred ceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCC-----eEEEE
Confidence 45799999999999998788899999986543 234578999999999999999999999987765 68999
Q ss_pred EEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccC
Q 041479 602 YEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMS 678 (771)
Q Consensus 602 ~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 678 (771)
|||+++++|.++ ...+++..+..++.|++.|++|||+. +|+|+||+|+||+++.++.+||+|||++.......
T Consensus 81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~- 156 (258)
T cd06632 81 LELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFS- 156 (258)
T ss_pred EEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCccceeccccc-
Confidence 999999999766 23478889999999999999999986 89999999999999999999999999987654322
Q ss_pred Ccccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCccc
Q 041479 679 SNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLF 742 (771)
Q Consensus 679 ~~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 742 (771)
......|+..|+||| +||++||+++|+.||.+... ......+.........+..+++.+
T Consensus 157 ----~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 231 (258)
T cd06632 157 ----FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEG-VAAVFKIGRSKELPPIPDHLSDEA 231 (258)
T ss_pred ----cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcH-HHHHHHHHhcccCCCcCCCcCHHH
Confidence 112345889999999 69999999999999965421 111222222122233445556666
Q ss_pred cccCcccChhchhhcCCHHHHHH
Q 041479 743 LVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 743 ~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
.....+||+.+|++||++.+++.
T Consensus 232 ~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 232 KDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred HHHHHHHhhcCcccCcCHHHHhc
Confidence 66777999999999999999975
No 242
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.96 E-value=2.1e-30 Score=276.62 Aligned_cols=229 Identities=23% Similarity=0.281 Sum_probs=184.3
Q ss_pred ccccccccceEEEEEecCCC---eEEEEEEeeccchh-hHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEE
Q 041479 527 VSYESLVKATVYKGILDLDQ---TFIAVKVLFLHQRG-ALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~---~~vAvK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
..+|+|.||.|++|.|+..+ ..||||.++..... ...+|++|+.+|.+++|||+|+|||+..+. ...|||
T Consensus 116 e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~q------p~mMV~ 189 (1039)
T KOG0199|consen 116 ELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLDQ------PAMMVF 189 (1039)
T ss_pred HHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeeccc------hhhHHh
Confidence 45899999999999997642 57999999766543 678999999999999999999999998874 367999
Q ss_pred EeccCCCCCCC-----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCccc
Q 041479 603 EFMHHGSLESC-----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVM 677 (771)
Q Consensus 603 e~~~~g~L~~~-----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~ 677 (771)
|.++.|+|.++ ...+-......++.|||.|+.||.+. ++||||+.++|+|+.....+||+|||+.+.++...
T Consensus 190 ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLesk---rlvHRDLAARNlllasprtVKI~DFGLmRaLg~ne 266 (1039)
T KOG0199|consen 190 ELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESK---RLVHRDLAARNLLLASPRTVKICDFGLMRALGENE 266 (1039)
T ss_pred hhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhhhheecccceeeeecccceeccCCCC
Confidence 99999999765 23456677889999999999999985 99999999999999999999999999999887655
Q ss_pred CCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhhhcCcc
Q 041479 678 SSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPL 741 (771)
Q Consensus 678 ~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 741 (771)
.+.. ......-...|.||| |||++|||+| |+.||.+. .+..+.+.+..+..-..++.+...
T Consensus 267 d~Yv-m~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~--~g~qIL~~iD~~erLpRPk~csed 343 (1039)
T KOG0199|consen 267 DMYV-MAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGC--RGIQILKNIDAGERLPRPKYCSED 343 (1039)
T ss_pred cceE-ecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCC--CHHHHHHhccccccCCCCCCChHH
Confidence 4321 112223456799999 8999999999 99999874 344455554444333345566667
Q ss_pred ccccCcccChhchhhcCCHHHHHHHH
Q 041479 742 FLVGGVQEGEETAEENIKKGQIRESL 767 (771)
Q Consensus 742 ~~~~~~~cl~~~p~~Rpt~~~vl~~L 767 (771)
|..++..||...|++|||+.++++.+
T Consensus 344 IY~imk~cWah~paDRptFsair~~~ 369 (1039)
T KOG0199|consen 344 IYQIMKNCWAHNPADRPTFSAIREDL 369 (1039)
T ss_pred HHHHHHHhccCCccccccHHHHHHhH
Confidence 77778899999999999999998543
No 243
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.96 E-value=1.3e-30 Score=250.22 Aligned_cols=229 Identities=21% Similarity=0.209 Sum_probs=182.2
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccc-hhhHHHHHHHHHHHhccC-CCCceeEEEEeecCCCCCceeEEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ-RGALKSFMAECQALRNIR-HRNLVKIITACSTSDFQGNYFRAL 600 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~~~~~~l 600 (771)
......+|.|.-|+|++++++.++...|||.+.... ....++++..++++.+.+ .|+||+.+|||.... ..++
T Consensus 94 l~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~-----dV~I 168 (391)
T KOG0983|consen 94 LENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNT-----DVFI 168 (391)
T ss_pred hhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCc-----hHHH
Confidence 344567899999999999999999999999997654 556788999999988886 899999999997765 4678
Q ss_pred EEEeccCCCCCC----CcccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcc
Q 041479 601 VYEFMHHGSLES----CPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676 (771)
Q Consensus 601 v~e~~~~g~L~~----~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~ 676 (771)
.||.|.. ..+. ..+++++.-.-++..-+.+||.||.+. .+|+|||+||+|||+|+.|.+|+||||++.++.+.
T Consensus 169 cMelMs~-C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeK--H~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdS 245 (391)
T KOG0983|consen 169 CMELMST-CAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEK--HGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDS 245 (391)
T ss_pred HHHHHHH-HHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHh--cceeecccCccceEEccCCCEEeecccccceeecc
Confidence 8998853 2222 245677777778888999999999985 49999999999999999999999999999877665
Q ss_pred cCCcccccccccccccccchh------------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchh--h
Q 041479 677 MSSNQCSSVGLKGTVGYATPE------------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQIL--Q 736 (771)
Q Consensus 677 ~~~~~~~~~~~~gt~~y~aPE------------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~--~ 736 (771)
..+. ...|.+.||||| ||++++|++||+.||...-.+-..+..++. ..|+..+ .
T Consensus 246 kAht-----rsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln-~ePP~L~~~~ 319 (391)
T KOG0983|consen 246 KAHT-----RSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLN-EEPPLLPGHM 319 (391)
T ss_pred cccc-----cccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHh-cCCCCCCccc
Confidence 4332 235889999999 799999999999999864333333444444 3332222 2
Q ss_pred hcCccccccCcccChhchhhcCCHHHHHH
Q 041479 737 VLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 737 ~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
.+++.+......|+++|+.+||...++++
T Consensus 320 gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~ 348 (391)
T KOG0983|consen 320 GFSPDFQSFVKDCLTKDHRKRPKYNKLLE 348 (391)
T ss_pred CcCHHHHHHHHHHhhcCcccCcchHHHhc
Confidence 26777777788999999999999888875
No 244
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.96 E-value=2.3e-29 Score=262.66 Aligned_cols=229 Identities=20% Similarity=0.239 Sum_probs=167.6
Q ss_pred cccccccceEEEEEecCCC--eEEEEEEeeccc-hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEe
Q 041479 528 SYESLVKATVYKGILDLDQ--TFIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEF 604 (771)
Q Consensus 528 ~l~~~~~~~Vy~~~~~~~~--~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~ 604 (771)
.+|+|.+|+||+|+...+. ..+++|.+.... ....+.|.+|+.+++.++||||+++++++.+.. ..|+||||
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~-----~~~lv~e~ 76 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAI-----PYLLVFEY 76 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCC-----ccEEEEec
Confidence 4799999999999765443 345667665433 344678999999999999999999999988765 67999999
Q ss_pred ccCCCCCCCc-------ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCccc
Q 041479 605 MHHGSLESCP-------RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVM 677 (771)
Q Consensus 605 ~~~g~L~~~~-------~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~ 677 (771)
+++|+|.++. ...++.....++.|++.||+|||+. +|+||||||+||+++.++.+|++|||++.......
T Consensus 77 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~ 153 (268)
T cd05086 77 CELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKED 153 (268)
T ss_pred CCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceEEEcCCccEEecccccccccCcch
Confidence 9999997652 2345666788999999999999985 89999999999999999999999999986432211
Q ss_pred CCcccccccccccccccchh----------------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCC---
Q 041479 678 SSNQCSSVGLKGTVGYATPE----------------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALP--- 731 (771)
Q Consensus 678 ~~~~~~~~~~~gt~~y~aPE----------------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~--- 731 (771)
. ........|+..|+||| |||++|||++ |..||....... .+.........
T Consensus 154 ~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~-~~~~~~~~~~~~~~ 230 (268)
T cd05086 154 Y--IETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDRE-VLNHVIKDQQVKLF 230 (268)
T ss_pred h--hhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHH-HHHHHHhhcccccC
Confidence 0 11122346788999998 5999999997 567876432211 12222222111
Q ss_pred -CchhhhcCccccccCcccChhchhhcCCHHHHHHHHH
Q 041479 732 -DQILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLI 768 (771)
Q Consensus 732 -~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~ 768 (771)
+......++.+......|| .+|++||++.+|++.|.
T Consensus 231 ~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 231 KPQLELPYSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred CCccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 2223334444444556898 67999999999998874
No 245
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.96 E-value=3e-29 Score=263.35 Aligned_cols=224 Identities=20% Similarity=0.201 Sum_probs=172.1
Q ss_pred ccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhc---cCCCCceeEEEEeecCCCCCceeEEEEE
Q 041479 529 YESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRN---IRHRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 529 l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~---l~H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
+|+|.+|.||++....+++.||||.+.... ......+.+|..+++. .+||||+.+++++.+.+ ..++||
T Consensus 2 lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-----~~~lv~ 76 (279)
T cd05633 2 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPD-----KLCFIL 76 (279)
T ss_pred cccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCC-----eEEEEE
Confidence 689999999999999888899999986442 1222344555544443 47999999999987766 679999
Q ss_pred EeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCC
Q 041479 603 EFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSS 679 (771)
Q Consensus 603 e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 679 (771)
||+++|+|.++ ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+|++|||++.......
T Consensus 77 e~~~~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~-- 151 (279)
T cd05633 77 DLMNGGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK-- 151 (279)
T ss_pred ecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHEEECCCCCEEEccCCcceeccccC--
Confidence 99999999765 34689999999999999999999985 89999999999999999999999999987543321
Q ss_pred cccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCcccc
Q 041479 680 NQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFL 743 (771)
Q Consensus 680 ~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 743 (771)
.....|++.|+||| +||++||+++|+.||.+................+...++.+++.+.
T Consensus 152 ----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (279)
T cd05633 152 ----PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTVNVELPDSFSPELK 227 (279)
T ss_pred ----ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHhhcCCcCCccccCHHHH
Confidence 12245899999999 6999999999999997543222111111122223344455566666
Q ss_pred ccCcccChhchhhcC-----CHHHHHHH
Q 041479 744 VGGVQEGEETAEENI-----KKGQIRES 766 (771)
Q Consensus 744 ~~~~~cl~~~p~~Rp-----t~~~vl~~ 766 (771)
....+|+..||++|| |+.++++.
T Consensus 228 ~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 228 SLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred HHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 677799999999999 59888763
No 246
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.96 E-value=2.9e-29 Score=260.76 Aligned_cols=231 Identities=25% Similarity=0.345 Sum_probs=180.9
Q ss_pred cccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEE
Q 041479 524 LLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYE 603 (771)
Q Consensus 524 ~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e 603 (771)
.....+|+|.+|+||+|..+++ +.||||.+.... ...+++.+|+.++++++||||+++++++.... ..++|||
T Consensus 9 ~i~~~ig~g~~~~v~~~~~~~~-~~~~vK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~~v~e 81 (261)
T cd05034 9 KLERKLGAGQFGEVWMGTWNGT-TKVAVKTLKPGT-MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEE-----PIYIVTE 81 (261)
T ss_pred eeeeeeccCcceEEEEEEEcCC-ceEEEEEecCCc-cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCC-----ceEEEEe
Confidence 3345679999999999998755 589999986443 34578999999999999999999999987655 6799999
Q ss_pred eccCCCCCCC-----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccC
Q 041479 604 FMHHGSLESC-----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMS 678 (771)
Q Consensus 604 ~~~~g~L~~~-----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 678 (771)
|+++++|.++ ...+++.++..++.|++.|++|||+. +++||||||+||++++++.+|++|||+++......
T Consensus 82 ~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~- 157 (261)
T cd05034 82 YMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVGENLVCKIADFGLARLIEDDE- 157 (261)
T ss_pred ccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEcCCCCEEECccccceeccchh-
Confidence 9999999766 23578999999999999999999986 89999999999999999999999999998654321
Q ss_pred Ccccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhhhcCccc
Q 041479 679 SNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLF 742 (771)
Q Consensus 679 ~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 742 (771)
.....+..++..|+||| +|+++||+++ |+.||.+... ....+......+...+...+..+
T Consensus 158 --~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 233 (261)
T cd05034 158 --YTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTN--REVLEQVERGYRMPRPPNCPEEL 233 (261)
T ss_pred --hhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHHcCCCCCCCCCCCHHH
Confidence 11112233567899999 6999999999 9999965321 12223333333322233335556
Q ss_pred cccCcccChhchhhcCCHHHHHHHHHH
Q 041479 743 LVGGVQEGEETAEENIKKGQIRESLIA 769 (771)
Q Consensus 743 ~~~~~~cl~~~p~~Rpt~~~vl~~L~~ 769 (771)
.....+|+..+|++||++.++++.|++
T Consensus 234 ~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 234 YDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred HHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 666779999999999999999999986
No 247
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.96 E-value=2.3e-29 Score=271.49 Aligned_cols=234 Identities=23% Similarity=0.293 Sum_probs=178.8
Q ss_pred ccccccccccceEEEEEecC-------CCeEEEEEEeeccc-hhhHHHHHHHHHHHhcc-CCCCceeEEEEeecCCCCCc
Q 041479 525 LNVSYESLVKATVYKGILDL-------DQTFIAVKVLFLHQ-RGALKSFMAECQALRNI-RHRNLVKIITACSTSDFQGN 595 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~-------~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~ 595 (771)
....+|+|.+|.||+|++.. ....||+|.+.... ....+++.+|+++++++ +||||+++++++...+
T Consensus 16 i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~---- 91 (334)
T cd05100 16 LGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG---- 91 (334)
T ss_pred ecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCC----
Confidence 34568999999999998643 22379999886432 33457899999999999 7999999999987765
Q ss_pred eeEEEEEEeccCCCCCCCc-------------------ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeee
Q 041479 596 YFRALVYEFMHHGSLESCP-------------------RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLL 656 (771)
Q Consensus 596 ~~~~lv~e~~~~g~L~~~~-------------------~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl 656 (771)
..+++|||+++|+|.++. ..+++.++..++.|++.||+|||+. +|+||||||+||++
T Consensus 92 -~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Nill 167 (334)
T cd05100 92 -PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIHRDLAARNVLV 167 (334)
T ss_pred -ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEE
Confidence 679999999999986551 2367888999999999999999985 99999999999999
Q ss_pred CCCCceEEecccCccccCcccCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCc
Q 041479 657 DNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGL 720 (771)
Q Consensus 657 ~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~ 720 (771)
+.++.+||+|||+++........ .......++..||||| +||++|||++ |..||.+... .
T Consensus 168 ~~~~~~kL~Dfg~~~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--~ 243 (334)
T cd05100 168 TEDNVMKIADFGLARDVHNIDYY--KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV--E 243 (334)
T ss_pred cCCCcEEECCcccceeccccccc--ccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCH--H
Confidence 99999999999999865432211 1112233467899999 6999999999 8888865321 1
Q ss_pred cHHHHHHhhCCCchhhhcCccccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 721 DLHNFVKMALPDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 721 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
.+............+......+.....+||+.+|++|||+.|+++.|+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~ 293 (334)
T cd05100 244 ELFKLLKEGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRV 293 (334)
T ss_pred HHHHHHHcCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHH
Confidence 22233322232223333344555566799999999999999999999876
No 248
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=99.96 E-value=1.8e-29 Score=263.39 Aligned_cols=231 Identities=19% Similarity=0.243 Sum_probs=181.2
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeeccc------hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEE
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLHQ------RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRAL 600 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~------~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~l 600 (771)
-.+|+|.+|.||+|....+++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+ ..++
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-----~~~~ 80 (268)
T cd06630 6 QQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDS-----HFNL 80 (268)
T ss_pred ceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCC-----eEEE
Confidence 34799999999999998888899999996432 224578999999999999999999999987766 6899
Q ss_pred EEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCC-ceEEecccCccccCcc
Q 041479 601 VYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDM-TAHMGDFGLTRFIPEV 676 (771)
Q Consensus 601 v~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~-~~kl~DfGla~~~~~~ 676 (771)
||||+++++|.++ ...+++..+..++.|++.||.|||+. +++||||||+||+++.++ .+|++|||.+......
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~ 157 (268)
T cd06630 81 FVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAK 157 (268)
T ss_pred EEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEcccccccccccc
Confidence 9999999999776 34678899999999999999999985 999999999999998765 5999999999876543
Q ss_pred cCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCC--ccHHHHHHhhCCCchhhhcC
Q 041479 677 MSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEG--LDLHNFVKMALPDQILQVLD 739 (771)
Q Consensus 677 ~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 739 (771)
............|+..|+||| +|+++||+++|+.||....... ....+..........++.++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (268)
T cd06630 158 GTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIPEHLS 237 (268)
T ss_pred cccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCCCCCCchhhC
Confidence 221111122346889999999 6999999999999996422111 11111112222344555566
Q ss_pred ccccccCcccChhchhhcCCHHHHHH
Q 041479 740 PLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 740 ~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
+.+.....+|+..+|++|||+.++++
T Consensus 238 ~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 238 PGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred HHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 77766777999999999999999975
No 249
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.96 E-value=1.9e-29 Score=264.39 Aligned_cols=233 Identities=17% Similarity=0.224 Sum_probs=180.7
Q ss_pred ccccccccccceEEEEEecC-----CCeEEEEEEeeccchh-hHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeE
Q 041479 525 LNVSYESLVKATVYKGILDL-----DQTFIAVKVLFLHQRG-ALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFR 598 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~-----~~~~vAvK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 598 (771)
....+|.|++|+||+|+.+. +.+.||+|.+...... ..+.+.+|++++++++||||+++++++.+.+ ..
T Consensus 9 ~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~ 83 (275)
T cd05046 9 EITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAE-----PH 83 (275)
T ss_pred eeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCC-----cc
Confidence 34458999999999999754 3458999998655433 5678999999999999999999999987765 67
Q ss_pred EEEEEeccCCCCCCC---cc---------cCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEec
Q 041479 599 ALVYEFMHHGSLESC---PR---------ILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGD 666 (771)
Q Consensus 599 ~lv~e~~~~g~L~~~---~~---------~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~D 666 (771)
++||||+++|+|.++ .. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++++|
T Consensus 84 ~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~~ 160 (275)
T cd05046 84 YMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRDLAARNCLVSSQREVKVSL 160 (275)
T ss_pred eEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCcCccceEEEeCCCcEEEcc
Confidence 999999999999765 12 588999999999999999999986 899999999999999999999999
Q ss_pred ccCccccCcccCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhC
Q 041479 667 FGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMAL 730 (771)
Q Consensus 667 fGla~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~ 730 (771)
||+++...... ........+++.|+||| +|+++||+++ |..||.+..... ..........
T Consensus 161 ~~~~~~~~~~~---~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~-~~~~~~~~~~ 236 (275)
T cd05046 161 LSLSKDVYNSE---YYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEE-VLNRLQAGKL 236 (275)
T ss_pred cccccccCccc---ccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHH-HHHHHHcCCc
Confidence 99987543221 11222335678899999 6999999999 888986542211 1222222222
Q ss_pred CCchhhhcCccccccCcccChhchhhcCCHHHHHHHHHH
Q 041479 731 PDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIA 769 (771)
Q Consensus 731 ~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~ 769 (771)
+......++..+.....+||+.+|++|||+.|+++.|++
T Consensus 237 ~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~~ 275 (275)
T cd05046 237 ELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALGE 275 (275)
T ss_pred CCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhcC
Confidence 222333455566667779999999999999999998863
No 250
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.96 E-value=3.9e-29 Score=259.71 Aligned_cols=232 Identities=21% Similarity=0.316 Sum_probs=180.5
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
+...-.+|+|.+|.||+|.+..+. .||+|.+... ....+.+.+|++++++++|+||+++++++.+ . ..+++|
T Consensus 8 ~~~~~~lg~g~~~~vy~~~~~~~~-~~~iK~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~-----~~~~v~ 79 (260)
T cd05073 8 LKLEKKLGAGQFGEVWMATYNKHT-KVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-E-----PIYIIT 79 (260)
T ss_pred eeEEeEecCccceEEEEEEecCCc-cEEEEecCCC-hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-C-----CeEEEE
Confidence 344556899999999999876554 7999988643 2345789999999999999999999999866 3 468999
Q ss_pred EeccCCCCCCC-----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCccc
Q 041479 603 EFMHHGSLESC-----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVM 677 (771)
Q Consensus 603 e~~~~g~L~~~-----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~ 677 (771)
||+++|+|.++ ...+++.++..++.|++.||+|||+. +++||||||+||+++.++.+|++|||.++......
T Consensus 80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 156 (260)
T cd05073 80 EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNE 156 (260)
T ss_pred EeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCCcceeeccCCC
Confidence 99999999765 23467888999999999999999985 89999999999999999999999999997654322
Q ss_pred CCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhhhcCcc
Q 041479 678 SSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPL 741 (771)
Q Consensus 678 ~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 741 (771)
. .......++..|+||| +||++||++| |+.||.+.. .....+......+..........
T Consensus 157 ~---~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 231 (260)
T cd05073 157 Y---TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMS--NPEVIRALERGYRMPRPENCPEE 231 (260)
T ss_pred c---ccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCC--HHHHHHHHhCCCCCCCcccCCHH
Confidence 1 1112234567899999 6999999999 999986532 12233333343333333344455
Q ss_pred ccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 742 FLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 742 ~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
+.....+|++.+|++||++.++.+.|+++
T Consensus 232 ~~~~i~~~l~~~p~~Rp~~~~l~~~L~~~ 260 (260)
T cd05073 232 LYNIMMRCWKNRPEERPTFEYIQSVLDDF 260 (260)
T ss_pred HHHHHHHHcccCcccCcCHHHHHHHHhcC
Confidence 55666799999999999999999999863
No 251
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.96 E-value=2.1e-29 Score=265.99 Aligned_cols=229 Identities=23% Similarity=0.298 Sum_probs=169.3
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhcc---CCCCceeEEEEeecCCCCCceeEEEE
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNI---RHRNLVKIITACSTSDFQGNYFRALV 601 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l---~H~nIv~l~~~~~~~~~~~~~~~~lv 601 (771)
..+|+|.+|+||+|+++.+++.||+|.+.... ......+.+|+++++++ +||||+++++++...........++|
T Consensus 6 ~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~~~lv 85 (288)
T cd07863 6 AEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETKVTLV 85 (288)
T ss_pred eEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCceEEEE
Confidence 45899999999999999999999999986542 22234566777777765 69999999999876443333467999
Q ss_pred EEeccCCCCCCC-----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcc
Q 041479 602 YEFMHHGSLESC-----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676 (771)
Q Consensus 602 ~e~~~~g~L~~~-----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~ 676 (771)
|||+++ ++.++ ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 86 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~kl~dfg~~~~~~~~ 161 (288)
T cd07863 86 FEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGQVKLADFGLARIYSCQ 161 (288)
T ss_pred Eccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccCccccccCc
Confidence 999975 66544 23478899999999999999999986 8999999999999999999999999999865432
Q ss_pred cCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhh-------CCC--
Q 041479 677 MSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMA-------LPD-- 732 (771)
Q Consensus 677 ~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~-------~~~-- 732 (771)
.. .....||+.|+||| +||++|||++|+.||....... .+.+..... .+.
T Consensus 162 ~~-----~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 235 (288)
T cd07863 162 MA-----LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD-QLGKIFDLIGLPPEDDWPRDV 235 (288)
T ss_pred cc-----CCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHH-HHHHHHHHhCCCChhhCcccc
Confidence 21 12345899999999 6999999999999986432111 111111110 000
Q ss_pred ----------------chhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 733 ----------------QILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 733 ----------------~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
.....++..+.....+|++.||++|||+.|++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 236 TLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred cccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 001122333334556999999999999999975
No 252
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.96 E-value=9.8e-30 Score=277.25 Aligned_cols=230 Identities=18% Similarity=0.173 Sum_probs=171.0
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEE
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
...+|+|.+|+||+++.+.+++.||||++.... ....+.+.+|+.++..++||||+++++++.+.+ ..|+||
T Consensus 6 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~-----~~~lv~ 80 (360)
T cd05627 6 LKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKR-----NLYLIM 80 (360)
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC-----EEEEEE
Confidence 345899999999999999999999999996432 334567889999999999999999999987766 789999
Q ss_pred EeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCC
Q 041479 603 EFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSS 679 (771)
Q Consensus 603 e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 679 (771)
||+++|+|.++ ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 81 E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~ 157 (360)
T cd05627 81 EFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRT 157 (360)
T ss_pred eCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEeeccCCccccccccc
Confidence 99999999776 34688899999999999999999985 9999999999999999999999999998754321100
Q ss_pred c-------------------------------ccccccccccccccchh---------------HHHHHHHHHhCCCCCC
Q 041479 680 N-------------------------------QCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTS 713 (771)
Q Consensus 680 ~-------------------------------~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~ 713 (771)
. .......+||+.||||| +||++|||++|+.||.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~Pf~ 237 (360)
T cd05627 158 EFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFC 237 (360)
T ss_pred ccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCCCC
Confidence 0 00112357999999999 6999999999999996
Q ss_pred ccccCCccHHHHHHhhCCCch--hhhcCccccccCcccChhchhhcCC---HHHHHH
Q 041479 714 DMFTEGLDLHNFVKMALPDQI--LQVLDPLFLVGGVQEGEETAEENIK---KGQIRE 765 (771)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~cl~~~p~~Rpt---~~~vl~ 765 (771)
+..... .............. ...+++.......+|+ .||.+|++ +.|+++
T Consensus 238 ~~~~~~-~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~ 292 (360)
T cd05627 238 SETPQE-TYRKVMNWKETLVFPPEVPISEKAKDLILRFC-TDSENRIGSNGVEEIKS 292 (360)
T ss_pred CCCHHH-HHHHHHcCCCceecCCCCCCCHHHHHHHHHhc-cChhhcCCCCCHHHHhc
Confidence 532211 11112111111111 1113333333333444 49999985 566553
No 253
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=99.96 E-value=3.7e-30 Score=263.07 Aligned_cols=221 Identities=25% Similarity=0.258 Sum_probs=177.9
Q ss_pred ccccccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEE
Q 041479 525 LNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALV 601 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv 601 (771)
.-..+|.|+||.||-++.+.+|+.||.|++...+ ++...-.+.|-.++.+++.+.||.+-.+|.+.+ ..|+|
T Consensus 189 ~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd-----~LClV 263 (591)
T KOG0986|consen 189 VYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKD-----ALCLV 263 (591)
T ss_pred eeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCC-----ceEEE
Confidence 3446899999999999999999999999996543 334456788999999999999999998888877 78999
Q ss_pred EEeccCCCCCCC-----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcc
Q 041479 602 YEFMHHGSLESC-----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676 (771)
Q Consensus 602 ~e~~~~g~L~~~-----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~ 676 (771)
|..|.||||..+ ...+++.+.+.++.+|+.||++||+. +||+||+||+|||+|++|+++|+|.|+|..+...
T Consensus 264 LtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g 340 (591)
T KOG0986|consen 264 LTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENILLDDHGHVRISDLGLAVEIPEG 340 (591)
T ss_pred EEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhheeeccCCCeEeeccceEEecCCC
Confidence 999999999765 34689999999999999999999986 9999999999999999999999999999877665
Q ss_pred cCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhh--CCCchhhhcC
Q 041479 677 MSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMA--LPDQILQVLD 739 (771)
Q Consensus 677 ~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 739 (771)
.. ..+.+||.+||||| +||++|||+.|+.||..- .......++-++. -+.+.++.++
T Consensus 341 ~~-----~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~-KeKvk~eEvdrr~~~~~~ey~~kFS 414 (591)
T KOG0986|consen 341 KP-----IRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQR-KEKVKREEVDRRTLEDPEEYSDKFS 414 (591)
T ss_pred Cc-----cccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhh-hhhhhHHHHHHHHhcchhhcccccC
Confidence 43 23457999999999 699999999999999652 2222222222222 2344455556
Q ss_pred ccccccCcccChhchhhcCC
Q 041479 740 PLFLVGGVQEGEETAEENIK 759 (771)
Q Consensus 740 ~~~~~~~~~cl~~~p~~Rpt 759 (771)
+..+.....-+++||++|.-
T Consensus 415 ~eakslc~~LL~Kdp~~RLG 434 (591)
T KOG0986|consen 415 EEAKSLCEGLLTKDPEKRLG 434 (591)
T ss_pred HHHHHHHHHHHccCHHHhcc
Confidence 66555555678999999974
No 254
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.96 E-value=2.6e-29 Score=264.73 Aligned_cols=228 Identities=21% Similarity=0.221 Sum_probs=179.8
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeeccc-hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEe
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEF 604 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~ 604 (771)
...+|+|.+|+||++++..+++.||+|++.... ....+++.+|+++++.++||||+++++++...+ ..++||||
T Consensus 10 ~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-----~~~lv~e~ 84 (284)
T cd06620 10 ISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNEN-----NICMCMEF 84 (284)
T ss_pred HHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCC-----EEEEEEec
Confidence 346899999999999999888899999986543 345678999999999999999999999998776 78999999
Q ss_pred ccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCcc
Q 041479 605 MHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQ 681 (771)
Q Consensus 605 ~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 681 (771)
+++|+|..+ .+.+++..+..++.+++.|+.|||+. .+++||||||+||+++.++.++|+|||++.......
T Consensus 85 ~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~---- 158 (284)
T cd06620 85 MDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNV--HRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSI---- 158 (284)
T ss_pred CCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHh--cCeeccCCCHHHEEECCCCcEEEccCCcccchhhhc----
Confidence 999999765 34578899999999999999999973 379999999999999999999999999987543221
Q ss_pred cccccccccccccchh---------------HHHHHHHHHhCCCCCCccccC------CccHHHHHHhhCC---Cchh-h
Q 041479 682 CSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTE------GLDLHNFVKMALP---DQIL-Q 736 (771)
Q Consensus 682 ~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~------~~~~~~~~~~~~~---~~~~-~ 736 (771)
.....|+..|+||| |||++||+++|+.||...... ...+.++...... .... .
T Consensus 159 --~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (284)
T cd06620 159 --ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLPSS 236 (284)
T ss_pred --cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCCCch
Confidence 11346899999999 799999999999999753321 1112223222221 1111 1
Q ss_pred hcCccccccCcccChhchhhcCCHHHHHHH
Q 041479 737 VLDPLFLVGGVQEGEETAEENIKKGQIRES 766 (771)
Q Consensus 737 ~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~ 766 (771)
.++..+.....+|++.||++|||+.|+++.
T Consensus 237 ~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~ 266 (284)
T cd06620 237 DFPEDLRDFVDACLLKDPTERPTPQQLCAM 266 (284)
T ss_pred hcCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 134445556679999999999999999874
No 255
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.96 E-value=2.2e-29 Score=275.01 Aligned_cols=182 Identities=21% Similarity=0.220 Sum_probs=148.5
Q ss_pred ccccccccccceEEEEEecCCCeEEEEEEeecc--chhhHHHHHHHHHHHhccCCCCceeEEEEeecCCC-CCceeEEEE
Q 041479 525 LNVSYESLVKATVYKGILDLDQTFIAVKVLFLH--QRGALKSFMAECQALRNIRHRNLVKIITACSTSDF-QGNYFRALV 601 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~-~~~~~~~lv 601 (771)
....+|+|.+|.||+|++...++.||||++... .....+.+.+|+.+++.++||||+++++++...+. ......|+|
T Consensus 28 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~~~~lv 107 (364)
T cd07875 28 NLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIV 107 (364)
T ss_pred EEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccCeEEEE
Confidence 345689999999999999988889999999643 23345678899999999999999999998765431 122357999
Q ss_pred EEeccCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCcc
Q 041479 602 YEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQ 681 (771)
Q Consensus 602 ~e~~~~g~L~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 681 (771)
|||++++........+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 108 ~e~~~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~---- 180 (364)
T cd07875 108 MELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF---- 180 (364)
T ss_pred EeCCCCCHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEECCCCcEEEEeCCCccccCCCC----
Confidence 99997643333345578888999999999999999985 99999999999999999999999999998654321
Q ss_pred cccccccccccccchh---------------HHHHHHHHHhCCCCCCc
Q 041479 682 CSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSD 714 (771)
Q Consensus 682 ~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~ 714 (771)
......||+.|+||| +||++|||++|+.||..
T Consensus 181 -~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~ 227 (364)
T cd07875 181 -MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPG 227 (364)
T ss_pred -cccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCC
Confidence 122346899999999 69999999999999964
No 256
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=99.96 E-value=2.2e-29 Score=271.08 Aligned_cols=228 Identities=19% Similarity=0.117 Sum_probs=170.8
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEE
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
...+|+|.+|+||+++.+.+++.||||++.... ....+.+.+|+.++..++||||+++++++.+.+ ..|+||
T Consensus 6 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-----~~~lv~ 80 (331)
T cd05597 6 LKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDEN-----NLYLVM 80 (331)
T ss_pred EEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCC-----eEEEEE
Confidence 456899999999999999988899999996432 234567889999999999999999999988776 789999
Q ss_pred EeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccC
Q 041479 603 EFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMS 678 (771)
Q Consensus 603 e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 678 (771)
||+++|+|.++ ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 157 (331)
T cd05597 81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGT 157 (331)
T ss_pred ecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEEECCCCCEEEEECCceeecCCCCC
Confidence 99999999765 34578889999999999999999985 899999999999999999999999999876543221
Q ss_pred Ccccccccccccccccchh--------------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhC--C-Cchh
Q 041479 679 SNQCSSVGLKGTVGYATPE--------------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMAL--P-DQIL 735 (771)
Q Consensus 679 ~~~~~~~~~~gt~~y~aPE--------------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~--~-~~~~ 735 (771)
......+||+.||||| +||++|||++|+.||.+.... ........... + ....
T Consensus 158 ---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~ 233 (331)
T cd05597 158 ---VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLV-ETYGKIMNHKEHFQFPPDV 233 (331)
T ss_pred ---ccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHH-HHHHHHHcCCCcccCCCcc
Confidence 1112246899999998 699999999999999653111 11111211111 1 1111
Q ss_pred hhcCccccccCcccC--hhchhhcCCHHHHHH
Q 041479 736 QVLDPLFLVGGVQEG--EETAEENIKKGQIRE 765 (771)
Q Consensus 736 ~~~~~~~~~~~~~cl--~~~p~~Rpt~~~vl~ 765 (771)
..++..+.....+|+ ..++..||++.++++
T Consensus 234 ~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~ 265 (331)
T cd05597 234 TDVSEEAKDLIRRLICSPETRLGRNGLQDFKD 265 (331)
T ss_pred CCCCHHHHHHHHHHccCcccccCCCCHHHHhc
Confidence 123333433444444 445555889988875
No 257
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.96 E-value=2e-29 Score=266.71 Aligned_cols=230 Identities=23% Similarity=0.252 Sum_probs=180.9
Q ss_pred cccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEE
Q 041479 524 LLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYE 603 (771)
Q Consensus 524 ~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e 603 (771)
.....+|+|.+|+||++....+++.||+|.+........+.+.+|+.++++++||||+++++++...+ ..|+|+|
T Consensus 22 ~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~-----~~~lv~e 96 (293)
T cd06647 22 TRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGD-----ELWVVME 96 (293)
T ss_pred eeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCC-----cEEEEEe
Confidence 33456899999999999988888899999997655555678999999999999999999999987766 6799999
Q ss_pred eccCCCCCCC--cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCcc
Q 041479 604 FMHHGSLESC--PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQ 681 (771)
Q Consensus 604 ~~~~g~L~~~--~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 681 (771)
|+++++|.++ ...+++.++..++.|++.|+.|||+. +++|||+||+||+++.++.+||+|||++........
T Consensus 97 ~~~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~--- 170 (293)
T cd06647 97 YLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS--- 170 (293)
T ss_pred cCCCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHHEEEcCCCCEEEccCcceeccccccc---
Confidence 9999999876 33578889999999999999999985 899999999999999999999999999875543221
Q ss_pred cccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCC-CchhhhcCcccccc
Q 041479 682 CSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALP-DQILQVLDPLFLVG 745 (771)
Q Consensus 682 ~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 745 (771)
......|++.|+||| |||++||+++|+.||........ ...+.....+ ....+.++..+...
T Consensus 171 -~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~l 248 (293)
T cd06647 171 -KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA-LYLIATNGTPELQNPEKLSAIFRDF 248 (293)
T ss_pred -ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhh-eeehhcCCCCCCCCccccCHHHHHH
Confidence 112345889999999 69999999999999965322111 1111111111 12223344455566
Q ss_pred CcccChhchhhcCCHHHHHHH
Q 041479 746 GVQEGEETAEENIKKGQIRES 766 (771)
Q Consensus 746 ~~~cl~~~p~~Rpt~~~vl~~ 766 (771)
..+||..+|++||++.+++..
T Consensus 249 i~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 249 LNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred HHHHccCChhhCcCHHHHhcC
Confidence 679999999999999999853
No 258
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.96 E-value=3.2e-29 Score=264.01 Aligned_cols=225 Identities=21% Similarity=0.232 Sum_probs=171.2
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEe
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEF 604 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~ 604 (771)
..+|+|.+|+||+|+.+.+++.||||++.... ....+.+.+|+.++++++||||+++++++.+.+ ..|+||||
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~~v~e~ 80 (285)
T cd07861 6 EKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQES-----RLYLIFEF 80 (285)
T ss_pred eEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCC-----eEEEEEec
Confidence 35799999999999999888899999986543 233467889999999999999999999988766 78999999
Q ss_pred ccCCCCCCC------cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccC
Q 041479 605 MHHGSLESC------PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMS 678 (771)
Q Consensus 605 ~~~g~L~~~------~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 678 (771)
++ +++.++ ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 156 (285)
T cd07861 81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVR 156 (285)
T ss_pred CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEEcCCCcEEECcccceeecCCCcc
Confidence 97 566443 14588999999999999999999985 999999999999999999999999999975432211
Q ss_pred Ccccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCc--------------------cH
Q 041479 679 SNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGL--------------------DL 722 (771)
Q Consensus 679 ~~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~--------------------~~ 722 (771)
......+++.|+||| +||++||++||+.||.+...... ..
T Consensus 157 ----~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (285)
T cd07861 157 ----VYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSL 232 (285)
T ss_pred ----cccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhh
Confidence 112235788999999 69999999999999864211000 00
Q ss_pred HHHHHhhCCC-------chhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 723 HNFVKMALPD-------QILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 723 ~~~~~~~~~~-------~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
..+ ....+. .....+++.+.....+||..||++|||+.+++.
T Consensus 233 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 233 PDY-KNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred HHH-HhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 000 000000 011123444445666999999999999999875
No 259
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.96 E-value=1.4e-31 Score=295.06 Aligned_cols=374 Identities=26% Similarity=0.338 Sum_probs=250.1
Q ss_pred cEEEEEcCCCCCcccCCccccCCCCCcEEEcCCCcccccCCccccCCCCCCEEecccCcCcccCCcccccCCcccccCCc
Q 041479 45 RVILLNLSGQNLTGTASPYIGNLTFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNALQGQIPDSRLILNKLEGNIPS 124 (771)
Q Consensus 45 ~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~l~~n~l~~~~p~ 124 (771)
++.+|||++|.+. ..|..+..+.+|+.|+++.|.|.. .|.+..++.+|++|+|.+|+++ .+|.
T Consensus 46 ~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i~~-vp~s~~~~~~l~~lnL~~n~l~---------------~lP~ 108 (1081)
T KOG0618|consen 46 KLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYIRS-VPSSCSNMRNLQYLNLKNNRLQ---------------SLPA 108 (1081)
T ss_pred eeEEeeccccccc-cCCchhhhHHHHhhcccchhhHhh-Cchhhhhhhcchhheeccchhh---------------cCch
Confidence 4889999999988 777888899999999999999985 7888999999999999999977 6778
Q ss_pred cccCCCCCCEEecccccCcCC-----------------------CC--ccceeeecccccccccCccccCCCCCCEEecc
Q 041479 125 ELGSLLKFKGLGLANNYFTGP-----------------------IP--HLNMFQVSVYSLTGSIPIQLLNITSMEYFHVS 179 (771)
Q Consensus 125 ~~~~l~~L~~L~Ls~N~l~~~-----------------------lp--~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls 179 (771)
++..+++|++|+++.|+|... ++ ..+.+++..|.+.+.++..+.+++. .|+|+
T Consensus 109 ~~~~lknl~~LdlS~N~f~~~Pl~i~~lt~~~~~~~s~N~~~~~lg~~~ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr 186 (1081)
T KOG0618|consen 109 SISELKNLQYLDLSFNHFGPIPLVIEVLTAEEELAASNNEKIQRLGQTSIKKLDLRLNVLGGSFLIDIYNLTH--QLDLR 186 (1081)
T ss_pred hHHhhhcccccccchhccCCCchhHHhhhHHHHHhhhcchhhhhhccccchhhhhhhhhcccchhcchhhhhe--eeecc
Confidence 888888888888888877621 11 1344555555555555555555544 45555
Q ss_pred cCcCcccCChh-----------------hhhCCCCCcEEEeecCcccccCCccccCCCCCCEEEccccccCCCCCcCccc
Q 041479 180 ENQLVGELPPH-----------------IGFTLPNVRILLLAGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDS 242 (771)
Q Consensus 180 ~N~l~g~lp~~-----------------~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 242 (771)
+|.+. .+.-. +...-++|+.|+.++|.++...+. + --.+|+++|+++|+++++ |+++
T Consensus 187 ~N~~~-~~dls~~~~l~~l~c~rn~ls~l~~~g~~l~~L~a~~n~l~~~~~~-p-~p~nl~~~dis~n~l~~l-p~wi-- 260 (1081)
T KOG0618|consen 187 YNEME-VLDLSNLANLEVLHCERNQLSELEISGPSLTALYADHNPLTTLDVH-P-VPLNLQYLDISHNNLSNL-PEWI-- 260 (1081)
T ss_pred cchhh-hhhhhhccchhhhhhhhcccceEEecCcchheeeeccCcceeeccc-c-ccccceeeecchhhhhcc-hHHH--
Confidence 55554 11110 011335566666666666633221 2 235678888888888765 4665
Q ss_pred ccCCCCCcEEEccCccccccCChhhhhcccccceeecccCcCcccCcccccccCCcceEecCCccceeccCcccc-----
Q 041479 243 LVNCTYLEVVSLSVNSLSGTLPNSLANFSSHLRYLYMSANPISGSIPTEIGNLKNLIIIAIEKFILIRNIPISVG----- 317 (771)
Q Consensus 243 l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~----- 317 (771)
..+.+|+.++..+|+|+ .+|..++... +|+.|.+..|.++ .+|+...+++.|+.|+|..|++....+..+.
T Consensus 261 -~~~~nle~l~~n~N~l~-~lp~ri~~~~-~L~~l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~ 336 (1081)
T KOG0618|consen 261 -GACANLEALNANHNRLV-ALPLRISRIT-SLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLNAS 336 (1081)
T ss_pred -HhcccceEecccchhHH-hhHHHHhhhh-hHHHHHhhhhhhh-hCCCcccccceeeeeeehhccccccchHHHhhhhHH
Confidence 66777888888888886 7777777665 6777777777777 6677777777888888877776332221111
Q ss_pred --------------------CCCCCCEEEccCCcccccCCcccccccccccccccCccceecCCcccccccce-eeeccc
Q 041479 318 --------------------YLLKLQVLSLFENNISREIPSSLGNFTFLTELNLCGNSIRGSVPSALGSCHQL-WLDLSH 376 (771)
Q Consensus 318 --------------------~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l-~L~Ls~ 376 (771)
.+..|+.|++.+|.++...-+.+.+++.|+.|+|++|+|...+...+.++..| .|+||+
T Consensus 337 l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSG 416 (1081)
T KOG0618|consen 337 LNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSG 416 (1081)
T ss_pred HHHHhhhhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhccc
Confidence 12335666777777766655666677777777777777764444455666666 677777
Q ss_pred CcccCCCCcCCCCCCCCCeEECCCCcccccCCcchhhhhcccccccEEECcCCCCCCC-CCccccccccccccccCCCc
Q 041479 377 NHLTGPIPLAVGNPKSIPHLDLSKNELSGEIPSSLAWIFGYISIFAKLNLSYNNLDGD-VPRKMIFKNASAISEAGNEK 454 (771)
Q Consensus 377 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~~~~~~~~~~~n~~ 454 (771)
|+|+ .+|+.+.++..|++|...+|+|. ..| .++ .+++|+.+|+|.|+|+.. +|......++..+.+.||.+
T Consensus 417 NkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~----~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~~ 488 (1081)
T KOG0618|consen 417 NKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELA----QLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNTR 488 (1081)
T ss_pred chhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhh----hcCcceEEecccchhhhhhhhhhCCCcccceeeccCCcc
Confidence 7776 55677777777777777777776 555 333 667777777777777532 33333335666677777765
No 260
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.96 E-value=3.5e-29 Score=260.86 Aligned_cols=230 Identities=22% Similarity=0.253 Sum_probs=177.1
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeeccc------hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEE
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ------RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRA 599 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~------~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 599 (771)
...+|.|.+|+||+|... +++.||||.+.... ....+.+.+|++++++++|+||+++++++.+.+ ..+
T Consensus 5 ~~~ig~g~~~~v~~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-----~~~ 78 (265)
T cd06631 5 GEVLGKGAYGTVYCGLTN-QGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDN-----TIS 78 (265)
T ss_pred cceEeccCCeEEEEEEEc-CCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCC-----eEE
Confidence 345799999999999875 45589999986432 223457889999999999999999999998765 789
Q ss_pred EEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcc
Q 041479 600 LVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676 (771)
Q Consensus 600 lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~ 676 (771)
+||||+++++|.++ ...+++..+..++.|++.|++|||+. +|+|+||||+||++++++.+|++|||+++.....
T Consensus 79 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 155 (265)
T cd06631 79 IFMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWV 155 (265)
T ss_pred EEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEEECCCCeEEeccchhhHhhhhc
Confidence 99999999999876 24578888999999999999999985 8999999999999999999999999998765321
Q ss_pred cCC--cccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHh-hCCCchhhhc
Q 041479 677 MSS--NQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKM-ALPDQILQVL 738 (771)
Q Consensus 677 ~~~--~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 738 (771)
... .........|+..|+||| +||++||+++|+.||....... ........ ...+..+..+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 234 (265)
T cd06631 156 GLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLA-AMFYIGAHRGLMPRLPDSF 234 (265)
T ss_pred cccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHH-HHHHhhhccCCCCCCCCCC
Confidence 110 011122346899999999 6999999999999996532111 11122211 1123344445
Q ss_pred CccccccCcccChhchhhcCCHHHHHH
Q 041479 739 DPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 739 ~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
+..+.....+||.++|++|||+.++++
T Consensus 235 ~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 235 SAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred CHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 555666677999999999999999875
No 261
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.96 E-value=5.5e-29 Score=257.97 Aligned_cols=226 Identities=23% Similarity=0.215 Sum_probs=178.5
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEe
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEF 604 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~ 604 (771)
..+|.|.+|.||++..+.+++.||||.+.... ....+.+.+|++++++++||||+++++.+...+ ...|+||||
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~----~~~~lv~e~ 81 (257)
T cd08223 6 RVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGED----GLLYIVMGF 81 (257)
T ss_pred EEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCC----CEEEEEecc
Confidence 45789999999999999888899999996543 334567899999999999999999998865433 157899999
Q ss_pred ccCCCCCCC-----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCC
Q 041479 605 MHHGSLESC-----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSS 679 (771)
Q Consensus 605 ~~~g~L~~~-----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 679 (771)
+++++|.++ ...+++.++..++.+++.|++|||+. +|+||||||+||+++.++.++|+|||++........
T Consensus 82 ~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~- 157 (257)
T cd08223 82 CEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCD- 157 (257)
T ss_pred cCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEEEecCCcEEEecccceEEecccCC-
Confidence 999999765 23578999999999999999999985 899999999999999999999999999986543221
Q ss_pred cccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCccccc
Q 041479 680 NQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFLV 744 (771)
Q Consensus 680 ~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 744 (771)
......|++.|+||| +|+++||+++|+.||....... .......... ...+..+++.+..
T Consensus 158 ---~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~ 232 (257)
T cd08223 158 ---MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNS-LVYRIIEGKL-PPMPKDYSPELGE 232 (257)
T ss_pred ---ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHH-HHHHHHhcCC-CCCccccCHHHHH
Confidence 122345889999999 6999999999999986432111 1112222222 2234455666767
Q ss_pred cCcccChhchhhcCCHHHHHH
Q 041479 745 GGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 745 ~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
...+|++.+|++|||+.++++
T Consensus 233 li~~~l~~~p~~Rp~~~~~l~ 253 (257)
T cd08223 233 LIATMLSKRPEKRPSVKSILR 253 (257)
T ss_pred HHHHHhccCcccCCCHHHHhc
Confidence 778999999999999999985
No 262
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.96 E-value=3.4e-29 Score=277.94 Aligned_cols=172 Identities=23% Similarity=0.328 Sum_probs=143.8
Q ss_pred cccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEE
Q 041479 524 LLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYE 603 (771)
Q Consensus 524 ~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e 603 (771)
.....+|+|.+|.||+|+++.+++.||||... ...+.+|++++++++|||||++++++...+ ..++|||
T Consensus 172 ~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~-----~~~lv~e 240 (461)
T PHA03211 172 AIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRVVGG-----LTCLVLP 240 (461)
T ss_pred EEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEEECC-----EEEEEEE
Confidence 34456899999999999999999899999642 234678999999999999999999988776 6799999
Q ss_pred eccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCC
Q 041479 604 FMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSS 679 (771)
Q Consensus 604 ~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 679 (771)
|+. ++|..+ ...+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 241 ~~~-~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~- 315 (461)
T PHA03211 241 KYR-SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWS- 315 (461)
T ss_pred ccC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEEECCCCCEEEcccCCceecccccc-
Confidence 995 576554 34589999999999999999999985 899999999999999999999999999986543221
Q ss_pred cccccccccccccccchh---------------HHHHHHHHHhCCCCC
Q 041479 680 NQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPT 712 (771)
Q Consensus 680 ~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~ 712 (771)
.....+..||+.||||| |||++|||++|..|+
T Consensus 316 -~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~l 362 (461)
T PHA03211 316 -TPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASL 362 (461)
T ss_pred -cccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCc
Confidence 11123457999999999 699999999987654
No 263
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.96 E-value=2.8e-29 Score=260.44 Aligned_cols=219 Identities=22% Similarity=0.294 Sum_probs=169.4
Q ss_pred cccccccceEEEEEecCCC----------eEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCcee
Q 041479 528 SYESLVKATVYKGILDLDQ----------TFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYF 597 (771)
Q Consensus 528 ~l~~~~~~~Vy~~~~~~~~----------~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 597 (771)
.+|+|.+|.||+|+++.++ ..||+|.+...... ...|.+|+.++++++||||+++++++.. . .
T Consensus 2 ~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~-----~ 74 (259)
T cd05037 2 HLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-D-----E 74 (259)
T ss_pred cccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-C-----C
Confidence 3789999999999998766 45888887554433 6889999999999999999999999877 4 4
Q ss_pred EEEEEEeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCC-------ceEEec
Q 041479 598 RALVYEFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDM-------TAHMGD 666 (771)
Q Consensus 598 ~~lv~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~-------~~kl~D 666 (771)
.++||||+++|+|.++ ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+|++|
T Consensus 75 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~~~~~~~~kl~D 151 (259)
T cd05037 75 NIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNILVARYGLNEGYVPFIKLSD 151 (259)
T ss_pred cEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccceEEEecCccccCCceeEEeCC
Confidence 5899999999999776 22578899999999999999999985 999999999999999887 799999
Q ss_pred ccCccccCcccCCcccccccccccccccchh-----------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHh
Q 041479 667 FGLTRFIPEVMSSNQCSSVGLKGTVGYATPE-----------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKM 728 (771)
Q Consensus 667 fGla~~~~~~~~~~~~~~~~~~gt~~y~aPE-----------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~ 728 (771)
||+++..... ....++..|+||| +||++||+++ |..|+.+.... ....+...
T Consensus 152 fg~a~~~~~~--------~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~--~~~~~~~~ 221 (259)
T cd05037 152 PGIPITVLSR--------EERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSS--EKERFYQD 221 (259)
T ss_pred CCcccccccc--------cccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCch--hHHHHHhc
Confidence 9999864331 1234667899999 6999999999 57777654211 11122111
Q ss_pred hCCCchhhhcCccccccCcccChhchhhcCCHHHHHHHHH
Q 041479 729 ALPDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLI 768 (771)
Q Consensus 729 ~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~ 768 (771)
. ...+......+.....+||..+|++|||+.++++.|+
T Consensus 222 ~--~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 222 Q--HRLPMPDCAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred C--CCCCCCCchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 1 1111111134445666999999999999999998873
No 264
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.96 E-value=5.9e-29 Score=257.65 Aligned_cols=225 Identities=18% Similarity=0.209 Sum_probs=180.5
Q ss_pred cccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEec
Q 041479 528 SYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFM 605 (771)
Q Consensus 528 ~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~~ 605 (771)
.+|+|.+|.||.++...+++.||+|.+.... ....+++.+|++++++++|+||+++++++.+.+ ..+++|||+
T Consensus 7 ~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-----~~~~~~e~~ 81 (256)
T cd08221 7 VLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDN-----TLLIEMEYA 81 (256)
T ss_pred EecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCC-----eEEEEEEec
Confidence 4689999999999999888999999986542 445678899999999999999999999998766 789999999
Q ss_pred cCCCCCCCc-----ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCc
Q 041479 606 HHGSLESCP-----RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSN 680 (771)
Q Consensus 606 ~~g~L~~~~-----~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 680 (771)
++|+|.++. ..+++.++..++.|++.|++|||+. +++||||||+||+++.++.+||+|||+++.......
T Consensus 82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~-- 156 (256)
T cd08221 82 NGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS-- 156 (256)
T ss_pred CCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEEeCCCCEEECcCcceEEcccccc--
Confidence 999997662 3478889999999999999999985 899999999999999999999999999986543321
Q ss_pred ccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCcccccc
Q 041479 681 QCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFLVG 745 (771)
Q Consensus 681 ~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 745 (771)
......|++.|+||| +|+++|||++|+.||...... ....+...+..+. ....++..+...
T Consensus 157 --~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~ 232 (256)
T cd08221 157 --MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPL-NLVVKIVQGNYTP-VVSVYSSELISL 232 (256)
T ss_pred --cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHH-HHHHHHHcCCCCC-CccccCHHHHHH
Confidence 122346899999999 699999999999998653211 1122222222222 224445556666
Q ss_pred CcccChhchhhcCCHHHHHHH
Q 041479 746 GVQEGEETAEENIKKGQIRES 766 (771)
Q Consensus 746 ~~~cl~~~p~~Rpt~~~vl~~ 766 (771)
..+||..+|++||++.++++.
T Consensus 233 i~~~l~~~p~~R~s~~~ll~~ 253 (256)
T cd08221 233 VHSLLQQDPEKRPTADEVLDQ 253 (256)
T ss_pred HHHHcccCcccCCCHHHHhhC
Confidence 779999999999999999875
No 265
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.96 E-value=6.3e-29 Score=260.74 Aligned_cols=226 Identities=19% Similarity=0.243 Sum_probs=180.5
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeeccc-hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEec
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFM 605 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~~ 605 (771)
..+|+|.+|.||+|.+..+++.||||.+.... ....+.+.+|++++++++||||+++++++.+.+ ..|+||||+
T Consensus 10 ~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-----~~~lv~e~~ 84 (277)
T cd06641 10 EKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDT-----KLWIIMEYL 84 (277)
T ss_pred eeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCC-----eEEEEEEeC
Confidence 34799999999999998888899999986443 334568899999999999999999999998776 789999999
Q ss_pred cCCCCCCC--cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCcccc
Q 041479 606 HHGSLESC--PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCS 683 (771)
Q Consensus 606 ~~g~L~~~--~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 683 (771)
++|+|.++ ...+++.....++.|++.|+.|||+. +++|+||||+||+++.++.++++|||++........ .
T Consensus 85 ~~~~l~~~i~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~----~ 157 (277)
T cd06641 85 GGGSALDLLEPGPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI----K 157 (277)
T ss_pred CCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHccC---CeecCCCCHHhEEECCCCCEEEeecccceecccchh----h
Confidence 99999776 34578999999999999999999985 999999999999999999999999999876543221 1
Q ss_pred cccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCccccccCcc
Q 041479 684 SVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFLVGGVQ 748 (771)
Q Consensus 684 ~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 748 (771)
.....|+..|+||| +||++||+++|..||.+... ...........+......++..+.....+
T Consensus 158 ~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 235 (277)
T cd06641 158 RNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHP--MKVLFLIPKNNPPTLEGNYSKPLKEFVEA 235 (277)
T ss_pred hccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccch--HHHHHHHhcCCCCCCCcccCHHHHHHHHH
Confidence 12245788999999 69999999999999965321 11222222222333344455556666779
Q ss_pred cChhchhhcCCHHHHHHH
Q 041479 749 EGEETAEENIKKGQIRES 766 (771)
Q Consensus 749 cl~~~p~~Rpt~~~vl~~ 766 (771)
||..+|++||++.++++.
T Consensus 236 ~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 236 CLNKEPSFRPTAKELLKH 253 (277)
T ss_pred HccCChhhCcCHHHHHhC
Confidence 999999999999999873
No 266
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.96 E-value=5.4e-29 Score=259.40 Aligned_cols=231 Identities=18% Similarity=0.166 Sum_probs=174.2
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeeccc-----hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEE
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ-----RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRAL 600 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~-----~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~l 600 (771)
...+|+|.+|+||+|+...+++.||||.+.... ....+.+.+|++++++++||||+++++++.+... ...++
T Consensus 7 ~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~---~~~~~ 83 (265)
T cd06652 7 GKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPME---RTLSI 83 (265)
T ss_pred eeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCC---ceEEE
Confidence 445789999999999999988999999985332 2345688999999999999999999998765431 15789
Q ss_pred EEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCccc
Q 041479 601 VYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVM 677 (771)
Q Consensus 601 v~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~ 677 (771)
||||+++|+|.++ ...+++....+++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 84 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~ 160 (265)
T cd06652 84 FMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANILRDSVGNVKLGDFGASKRLQTIC 160 (265)
T ss_pred EEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEecCCCCEEECcCcccccccccc
Confidence 9999999999876 24578888999999999999999986 89999999999999999999999999998653221
Q ss_pred CCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCccc
Q 041479 678 SSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLF 742 (771)
Q Consensus 678 ~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 742 (771)
.. ........|+..|+||| |||++||+++|+.||.+.... ....+..........+...+..+
T Consensus 161 ~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 238 (265)
T cd06652 161 LS-GTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAM-AAIFKIATQPTNPVLPPHVSDHC 238 (265)
T ss_pred cc-ccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchH-HHHHHHhcCCCCCCCchhhCHHH
Confidence 11 11122345889999999 699999999999999753111 11222221111222333344444
Q ss_pred cccCcccChhchhhcCCHHHHHH
Q 041479 743 LVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 743 ~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
.....+|+ .+|++||+++|+++
T Consensus 239 ~~~i~~~l-~~p~~Rp~~~~il~ 260 (265)
T cd06652 239 RDFLKRIF-VEAKLRPSADELLR 260 (265)
T ss_pred HHHHHHHh-cChhhCCCHHHHhc
Confidence 44455777 48999999999985
No 267
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.96 E-value=4.7e-29 Score=260.46 Aligned_cols=231 Identities=22% Similarity=0.252 Sum_probs=178.6
Q ss_pred cccccccccceEEEEEecC-CCeEEEEEEeecc----------chhhHHHHHHHHHHHhc-cCCCCceeEEEEeecCCCC
Q 041479 526 NVSYESLVKATVYKGILDL-DQTFIAVKVLFLH----------QRGALKSFMAECQALRN-IRHRNLVKIITACSTSDFQ 593 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~-~~~~vAvK~~~~~----------~~~~~~~~~~E~~~l~~-l~H~nIv~l~~~~~~~~~~ 593 (771)
...+|+|.+|.||+|+++. +++.||||.+... ......++.+|+.++.+ ++||||+++++++.+.+
T Consensus 5 ~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~-- 82 (269)
T cd08528 5 LEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLEND-- 82 (269)
T ss_pred hhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccCC--
Confidence 3457999999999999987 6779999998532 22345678889998875 79999999999988766
Q ss_pred CceeEEEEEEeccCCCCCCC-------cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEec
Q 041479 594 GNYFRALVYEFMHHGSLESC-------PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGD 666 (771)
Q Consensus 594 ~~~~~~lv~e~~~~g~L~~~-------~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~D 666 (771)
..++||||+++++|.++ ...+++..+..++.|++.|+.|||+. .+++||||||+||+++.++.+|++|
T Consensus 83 ---~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~--~~i~H~dl~~~nil~~~~~~~~l~d 157 (269)
T cd08528 83 ---RLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKE--KRIVHRDLTPNNIMLGEDDKVTITD 157 (269)
T ss_pred ---eEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccC--CceeecCCCHHHEEECCCCcEEEec
Confidence 78999999999999654 23578888999999999999999963 3799999999999999999999999
Q ss_pred ccCccccCcccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCC
Q 041479 667 FGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALP 731 (771)
Q Consensus 667 fGla~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~ 731 (771)
||++....... ......|+..|+||| +|+++||+++|+.||...... ...........+
T Consensus 158 fg~~~~~~~~~-----~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~-~~~~~~~~~~~~ 231 (269)
T cd08528 158 FGLAKQKQPES-----KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNML-SLATKIVEAVYE 231 (269)
T ss_pred ccceeeccccc-----ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHH-HHHHHHhhccCC
Confidence 99998654322 122345889999999 699999999999998542111 111112222222
Q ss_pred CchhhhcCccccccCcccChhchhhcCCHHHHHHHHHH
Q 041479 732 DQILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIA 769 (771)
Q Consensus 732 ~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~ 769 (771)
+......++.+...+.+||+.||++||++.|+.+++++
T Consensus 232 ~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~~ 269 (269)
T cd08528 232 PLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMISD 269 (269)
T ss_pred cCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhcC
Confidence 21222445566667779999999999999999998864
No 268
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.96 E-value=4.8e-29 Score=267.05 Aligned_cols=177 Identities=21% Similarity=0.255 Sum_probs=141.6
Q ss_pred ccccccccceEEEEEecC--CCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEe
Q 041479 527 VSYESLVKATVYKGILDL--DQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEF 604 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~--~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~ 604 (771)
..+|+|.+|+||+|+.+. +++.||+|.+.... ....+.+|++++++++||||+++++++..... ...|+||||
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~---~~~~lv~e~ 81 (317)
T cd07868 7 CKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHAD---RKVWLLFDY 81 (317)
T ss_pred cccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCC---cEEEEEEec
Confidence 358999999999999764 45789999985432 23567889999999999999999998865431 267999999
Q ss_pred ccCCCCCCC------------cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeee----CCCCceEEeccc
Q 041479 605 MHHGSLESC------------PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLL----DNDMTAHMGDFG 668 (771)
Q Consensus 605 ~~~g~L~~~------------~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl----~~~~~~kl~DfG 668 (771)
+.+ ++.++ ...+++..+..++.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||
T Consensus 82 ~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG 157 (317)
T cd07868 82 AEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMG 157 (317)
T ss_pred cCC-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEecCCCCcCcEEEeecC
Confidence 964 55332 12478888999999999999999986 89999999999999 456789999999
Q ss_pred CccccCcccCCcccccccccccccccchh----------------HHHHHHHHHhCCCCCC
Q 041479 669 LTRFIPEVMSSNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTS 713 (771)
Q Consensus 669 la~~~~~~~~~~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~ 713 (771)
+|+........ ........||+.||||| +||++|||++|+.||.
T Consensus 158 ~a~~~~~~~~~-~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~ 217 (317)
T cd07868 158 FARLFNSPLKP-LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 217 (317)
T ss_pred ceeccCCCCcc-ccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCcc
Confidence 99876433211 11223457899999999 6999999999999985
No 269
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.96 E-value=9.4e-29 Score=258.73 Aligned_cols=237 Identities=23% Similarity=0.285 Sum_probs=177.9
Q ss_pred ccccccccceEEEEEecC---CCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCc-eeEEE
Q 041479 527 VSYESLVKATVYKGILDL---DQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGN-YFRAL 600 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~---~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~-~~~~l 600 (771)
..+|+|++|+||+|.++. +++.||||++.... ....+++.+|++++++++||||+++++++......+. ...++
T Consensus 5 ~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~ 84 (273)
T cd05074 5 RMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPIPMV 84 (273)
T ss_pred hcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcccceEE
Confidence 357999999999998754 35799999996542 3446788999999999999999999998865432221 24578
Q ss_pred EEEeccCCCCCCC---------cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCcc
Q 041479 601 VYEFMHHGSLESC---------PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTR 671 (771)
Q Consensus 601 v~e~~~~g~L~~~---------~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~ 671 (771)
++||+++|+|..+ ...+++.....++.|++.|++|||+. +|+||||||+||+++.++.+|++|||+++
T Consensus 85 ~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~nili~~~~~~kl~dfg~~~ 161 (273)
T cd05074 85 ILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCMLNENMTVCVADFGLSK 161 (273)
T ss_pred EEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccchhhEEEcCCCCEEECcccccc
Confidence 9999999998543 12468888999999999999999985 89999999999999999999999999998
Q ss_pred ccCcccCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchh
Q 041479 672 FIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQIL 735 (771)
Q Consensus 672 ~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~ 735 (771)
....... ........+++.|++|| +||++||+++ |+.||.+... ..+.............
T Consensus 162 ~~~~~~~--~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~--~~~~~~~~~~~~~~~~ 237 (273)
T cd05074 162 KIYSGDY--YRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVEN--SEIYNYLIKGNRLKQP 237 (273)
T ss_pred cccCCcc--eecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCH--HHHHHHHHcCCcCCCC
Confidence 6543221 11112234567899999 6999999999 8888864321 2222222222111122
Q ss_pred hhcCccccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 736 QVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 736 ~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
......+...+.+||+.+|++|||+.++++.|+++
T Consensus 238 ~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 238 PDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 23344555667799999999999999999999986
No 270
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.96 E-value=5.5e-29 Score=258.91 Aligned_cols=231 Identities=20% Similarity=0.201 Sum_probs=182.0
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeecc--chhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEe
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLH--QRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEF 604 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~ 604 (771)
..+|.|.+|+||++.+..+++.||+|++... .....+++..|++++++++||||+++++++..... ...+++|||
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~---~~~~~~~e~ 82 (265)
T cd08217 6 ETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSN---QTLYIVMEY 82 (265)
T ss_pred eeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCC---CEEEEEehh
Confidence 4579999999999999988889999998643 23445678999999999999999999998765432 267999999
Q ss_pred ccCCCCCCC-------cccCCHHHHHHHHHHHHHHHHHHHhcC--CCCeEecCCCCCCeeeCCCCceEEecccCccccCc
Q 041479 605 MHHGSLESC-------PRILSFLRRLNIAIDVASALEYLHHHC--KKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPE 675 (771)
Q Consensus 605 ~~~g~L~~~-------~~~l~~~~~~~i~~~ia~gL~~LH~~~--~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~ 675 (771)
+++++|.++ ...+++.++..++.|++.||+|||..+ ..+++||||||+||+++.++.+|++|||++.....
T Consensus 83 ~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~~~ 162 (265)
T cd08217 83 CEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGH 162 (265)
T ss_pred ccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccccC
Confidence 999999765 246788999999999999999999332 35899999999999999999999999999986643
Q ss_pred ccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCc
Q 041479 676 VMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDP 740 (771)
Q Consensus 676 ~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 740 (771)
... ......|++.|+||| +|+++|++++|+.||.... ...+.+..........+...+.
T Consensus 163 ~~~----~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 236 (265)
T cd08217 163 DSS----FAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARN--QLQLASKIKEGKFRRIPYRYSS 236 (265)
T ss_pred Ccc----cccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcC--HHHHHHHHhcCCCCCCccccCH
Confidence 221 112346899999999 6999999999999997532 2223333333333334444555
Q ss_pred cccccCcccChhchhhcCCHHHHHHH
Q 041479 741 LFLVGGVQEGEETAEENIKKGQIRES 766 (771)
Q Consensus 741 ~~~~~~~~cl~~~p~~Rpt~~~vl~~ 766 (771)
.+.....+|+..+|++|||+.+|++.
T Consensus 237 ~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 237 ELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred HHHHHHHHHccCCcccCCCHHHHhhC
Confidence 66667779999999999999999863
No 271
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.96 E-value=5.7e-29 Score=257.79 Aligned_cols=228 Identities=24% Similarity=0.345 Sum_probs=176.2
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEec
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFM 605 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~~ 605 (771)
...+|+|.+|.||+|.+..+ +.+|+|.+.... ....+|.+|++++++++||||+++++++.... ..++||||+
T Consensus 9 ~~~ig~g~~g~v~~~~~~~~-~~~~~k~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-----~~~~v~e~~ 81 (256)
T cd05112 9 VQEIGSGQFGLVWLGYWLEK-RKVAIKTIREGA-MSEEDFIEEAQVMMKLSHPKLVQLYGVCTERS-----PICLVFEFM 81 (256)
T ss_pred EeeecCcccceEEEEEEeCC-CeEEEEECCCCC-CCHHHHHHHHHHHHhCCCCCeeeEEEEEccCC-----ceEEEEEcC
Confidence 44579999999999988754 489999886433 23467999999999999999999999987765 679999999
Q ss_pred cCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCcc
Q 041479 606 HHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQ 681 (771)
Q Consensus 606 ~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 681 (771)
++|+|.++ ...+++..+..++.|++.|++|||+. +++||||||+||+++.++.+||+|||+++.......
T Consensus 82 ~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~--- 155 (256)
T cd05112 82 EHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQY--- 155 (256)
T ss_pred CCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcCCCeEEECCCcceeecccCcc---
Confidence 99999765 23478888999999999999999985 899999999999999999999999999875533211
Q ss_pred cccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhhhcCcccccc
Q 041479 682 CSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFLVG 745 (771)
Q Consensus 682 ~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 745 (771)
....+..++..|+||| +|+++||+++ |+.||.+... ..+.+..........+...+..+...
T Consensus 156 ~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l 233 (256)
T cd05112 156 TSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSN--SEVVETINAGFRLYKPRLASQSVYEL 233 (256)
T ss_pred cccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCH--HHHHHHHhCCCCCCCCCCCCHHHHHH
Confidence 1112233567899999 6999999998 9999865321 11222222222222233344555566
Q ss_pred CcccChhchhhcCCHHHHHHHHH
Q 041479 746 GVQEGEETAEENIKKGQIRESLI 768 (771)
Q Consensus 746 ~~~cl~~~p~~Rpt~~~vl~~L~ 768 (771)
+.+||+.+|++|||+.++++.|+
T Consensus 234 ~~~~l~~~p~~Rp~~~~~l~~l~ 256 (256)
T cd05112 234 MQHCWKERPEDRPSFSLLLHQLA 256 (256)
T ss_pred HHHHcccChhhCCCHHHHHHhhC
Confidence 77999999999999999999873
No 272
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.96 E-value=4.4e-29 Score=264.64 Aligned_cols=233 Identities=20% Similarity=0.254 Sum_probs=174.3
Q ss_pred ccccccccccceEEEEEecC----------------CCeEEEEEEeeccc-hhhHHHHHHHHHHHhccCCCCceeEEEEe
Q 041479 525 LNVSYESLVKATVYKGILDL----------------DQTFIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITAC 587 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~----------------~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~ 587 (771)
....+|+|.+|+||++.+.. +...||+|++.... ....++|.+|+++++.++||||+++++++
T Consensus 9 ~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~ 88 (296)
T cd05095 9 FKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRLLAVC 88 (296)
T ss_pred eeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEE
Confidence 34458999999999986432 34479999996543 34457899999999999999999999998
Q ss_pred ecCCCCCceeEEEEEEeccCCCCCCCc--------------ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCC
Q 041479 588 STSDFQGNYFRALVYEFMHHGSLESCP--------------RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSN 653 (771)
Q Consensus 588 ~~~~~~~~~~~~lv~e~~~~g~L~~~~--------------~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~N 653 (771)
...+ ..++||||+++|+|.++. ..+++.+...++.|++.|++|||+. +|+||||||+|
T Consensus 89 ~~~~-----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dlkp~N 160 (296)
T cd05095 89 ITSD-----PLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVHRDLATRN 160 (296)
T ss_pred ecCC-----ccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhe
Confidence 7766 679999999999996551 2366778999999999999999985 89999999999
Q ss_pred eeeCCCCceEEecccCccccCcccCCcccccccccccccccchh---------------HHHHHHHHHh--CCCCCCccc
Q 041479 654 VLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT--GKRPTSDMF 716 (771)
Q Consensus 654 ILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t--g~~P~~~~~ 716 (771)
|+++.++.+|++|||+++.+...... .......+++.|+||| |||++|||++ |..||....
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~~--~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~ 238 (296)
T cd05095 161 CLVGKNYTIKIADFGMSRNLYSGDYY--RIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLS 238 (296)
T ss_pred EEEcCCCCEEeccCcccccccCCcce--eccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccC
Confidence 99999999999999999865332211 1111223467899998 6999999998 677885432
Q ss_pred cCCccHHHHHHh----h---CCCchhhhcCccccccCcccChhchhhcCCHHHHHHHHHH
Q 041479 717 TEGLDLHNFVKM----A---LPDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIA 769 (771)
Q Consensus 717 ~~~~~~~~~~~~----~---~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~ 769 (771)
... ....... . ........+++.+...+.+||+.||++|||+.+|++.|++
T Consensus 239 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 296 (296)
T cd05095 239 DEQ--VIENTGEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLLE 296 (296)
T ss_pred hHH--HHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHhC
Confidence 111 1111110 0 0011122334555566779999999999999999999874
No 273
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.96 E-value=7.4e-29 Score=261.34 Aligned_cols=226 Identities=20% Similarity=0.285 Sum_probs=180.0
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEec
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFM 605 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~~ 605 (771)
...+|+|.+|.||++..+.+++.||+|++........+.+.+|+.++++++||||+++++++...+ ..++|+||+
T Consensus 24 ~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~-----~~~~v~e~~ 98 (285)
T cd06648 24 FVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGD-----ELWVVMEFL 98 (285)
T ss_pred ceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCC-----eEEEEEecc
Confidence 457899999999999998888899999997665555677899999999999999999999987766 689999999
Q ss_pred cCCCCCCC--cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCcccc
Q 041479 606 HHGSLESC--PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCS 683 (771)
Q Consensus 606 ~~g~L~~~--~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~ 683 (771)
++++|.++ ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.++++|||.+........ .
T Consensus 99 ~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~----~ 171 (285)
T cd06648 99 EGGALTDIVTHTRMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVP----R 171 (285)
T ss_pred CCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEEEcCCCcEEEcccccchhhccCCc----c
Confidence 99999776 34578889999999999999999986 899999999999999999999999998875433211 1
Q ss_pred cccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchh--hhcCccccccC
Q 041479 684 SVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQIL--QVLDPLFLVGG 746 (771)
Q Consensus 684 ~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 746 (771)
.....|++.|+||| +||++||+++|+.||.+... ...........+.... ..++..+....
T Consensus 172 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~li 249 (285)
T cd06648 172 RKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPP--LQAMKRIRDNLPPKLKNLHKVSPRLRSFL 249 (285)
T ss_pred cccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCH--HHHHHHHHhcCCCCCcccccCCHHHHHHH
Confidence 12345899999999 69999999999999864211 1122222222222221 12445566677
Q ss_pred cccChhchhhcCCHHHHHH
Q 041479 747 VQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 747 ~~cl~~~p~~Rpt~~~vl~ 765 (771)
.+||..+|++|||+.++++
T Consensus 250 ~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 250 DRMLVRDPAQRATAAELLN 268 (285)
T ss_pred HHHcccChhhCcCHHHHcc
Confidence 7999999999999999985
No 274
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.96 E-value=3.2e-29 Score=266.38 Aligned_cols=228 Identities=22% Similarity=0.277 Sum_probs=173.7
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccc-hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALV 601 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv 601 (771)
+.....+|+|.+|.||+|+++.+++.||+|.+.... ......+.+|++++++++||||+++++++.+.+ ..++|
T Consensus 8 y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~-----~~~lv 82 (301)
T cd07873 8 YIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEK-----SLTLV 82 (301)
T ss_pred eEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCC-----eEEEE
Confidence 344556899999999999999888899999996543 333457889999999999999999999988766 78999
Q ss_pred EEeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCccc
Q 041479 602 YEFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVM 677 (771)
Q Consensus 602 ~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~ 677 (771)
|||++ ++|.+. ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 83 ~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 158 (301)
T cd07873 83 FEYLD-KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPT 158 (301)
T ss_pred Eeccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHHEEECCCCcEEECcCcchhccCCCC
Confidence 99997 477554 34578888999999999999999985 99999999999999999999999999997543221
Q ss_pred CCcccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHh-------------
Q 041479 678 SSNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKM------------- 728 (771)
Q Consensus 678 ~~~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~------------- 728 (771)
. ......+++.|+||| +||++|||++|+.||....... .......
T Consensus 159 ~----~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 232 (301)
T cd07873 159 K----TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEE--QLHFIFRILGTPTEETWPGI 232 (301)
T ss_pred C----cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHHcCCCChhhchhh
Confidence 1 112235788999999 6999999999999996431110 0000000
Q ss_pred ---------hCCC-------chhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 729 ---------ALPD-------QILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 729 ---------~~~~-------~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
..+. .....+++.+.....+|++.||.+|||+.|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 233 LSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred hccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 0010 011123444445666999999999999999986
No 275
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.96 E-value=1.4e-29 Score=273.40 Aligned_cols=187 Identities=28% Similarity=0.327 Sum_probs=156.5
Q ss_pred cccccccccccccceEEEEEecCCCeEEEEEEeecc-chhhHHHHHHHHHHHhccCCCCceeEEEEeecCC-CCCceeEE
Q 041479 522 DLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLH-QRGALKSFMAECQALRNIRHRNLVKIITACSTSD-FQGNYFRA 599 (771)
Q Consensus 522 ~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~-~~~~~~~~ 599 (771)
.+...-.+|+|++|.||+|+++.+|+.||||.+... ....+++..+|+++|++++|||||+++++-.+.. ..-.....
T Consensus 14 ~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~v 93 (732)
T KOG4250|consen 14 LWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPV 93 (732)
T ss_pred ceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccce
Confidence 455667799999999999999999999999999654 3456788999999999999999999999854432 00123568
Q ss_pred EEEEeccCCCCCCC------cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeC--CCC--ceEEecccC
Q 041479 600 LVYEFMHHGSLESC------PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD--NDM--TAHMGDFGL 669 (771)
Q Consensus 600 lv~e~~~~g~L~~~------~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~--~~~--~~kl~DfGl 669 (771)
+|||||.+|||+.. ...+++.+.+.+..+++.||.|||++ +|+||||||.||++. .+| .-||+|||.
T Consensus 94 lvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~ 170 (732)
T KOG4250|consen 94 LVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLREN---GIVHRDLKPGNIVLQIGEDGQSIYKLTDFGA 170 (732)
T ss_pred EEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEeecCCCceEEeeecccc
Confidence 99999999999766 34589999999999999999999986 999999999999994 233 479999999
Q ss_pred ccccCcccCCcccccccccccccccchh----------------HHHHHHHHHhCCCCCCccc
Q 041479 670 TRFIPEVMSSNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMF 716 (771)
Q Consensus 670 a~~~~~~~~~~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~ 716 (771)
||.+++.. ..++.+||+.|.+|| |||++||.+||..||...+
T Consensus 171 Arel~d~s-----~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~ 228 (732)
T KOG4250|consen 171 ARELDDNS-----LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFG 228 (732)
T ss_pred cccCCCCC-----eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCC
Confidence 99776543 345678999999999 7999999999999996543
No 276
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.96 E-value=6.4e-29 Score=258.51 Aligned_cols=231 Identities=26% Similarity=0.303 Sum_probs=180.6
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeeccch--hhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEE
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLHQR--GALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYE 603 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e 603 (771)
...+|+|.+|.||+|+...+++.||+|.+..... ...+.+..|++++++++|+||+++++++.+.+ ..++|+|
T Consensus 5 ~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~-----~~~lv~e 79 (264)
T cd06626 5 GNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHRE-----KVYIFME 79 (264)
T ss_pred eeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCC-----EEEEEEe
Confidence 3467999999999999988888999999976543 36788999999999999999999999987665 7899999
Q ss_pred eccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCc
Q 041479 604 FMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSN 680 (771)
Q Consensus 604 ~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 680 (771)
|+++++|.++ ...+++..+..++.|++.|++|||+. +|+||||+|+||++++++.+||+|||++..........
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~ 156 (264)
T cd06626 80 YCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTM 156 (264)
T ss_pred cCCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEcccccccccCCCCCcc
Confidence 9999999876 23478889999999999999999985 89999999999999999999999999998764432211
Q ss_pred ccccccccccccccchh------------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhh--cCc
Q 041479 681 QCSSVGLKGTVGYATPE------------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQV--LDP 740 (771)
Q Consensus 681 ~~~~~~~~gt~~y~aPE------------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 740 (771)
........+++.|+||| ||+++||+++|+.||....... ..........+...+.. +++
T Consensus 157 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 235 (264)
T cd06626 157 GEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEF-QIMFHVGAGHKPPIPDSLQLSP 235 (264)
T ss_pred cccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchH-HHHHHHhcCCCCCCCcccccCH
Confidence 11112346788999999 6999999999999996532111 11111222222222222 255
Q ss_pred cccccCcccChhchhhcCCHHHHHH
Q 041479 741 LFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 741 ~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
.+.....+||+.+|.+|||+.|++.
T Consensus 236 ~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 236 EGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred HHHHHHHHHccCCcccCCCHHHHhc
Confidence 5556667999999999999999874
No 277
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.96 E-value=6.9e-29 Score=257.16 Aligned_cols=228 Identities=27% Similarity=0.398 Sum_probs=181.2
Q ss_pred ccccccccceEEEEEecCCC----eEEEEEEeeccchh-hHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEE
Q 041479 527 VSYESLVKATVYKGILDLDQ----TFIAVKVLFLHQRG-ALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALV 601 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~----~~vAvK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv 601 (771)
..+|.|.+|.||++++...+ ..||+|++...... ..+.+..|++++..++||||+++++++.+.+ ..+++
T Consensus 5 ~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-----~~~~i 79 (258)
T smart00219 5 KKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEE-----PLMIV 79 (258)
T ss_pred ceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCC-----eeEEE
Confidence 35789999999999998765 79999999655432 5678999999999999999999999988765 67999
Q ss_pred EEeccCCCCCCCc---cc--CCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcc
Q 041479 602 YEFMHHGSLESCP---RI--LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676 (771)
Q Consensus 602 ~e~~~~g~L~~~~---~~--l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~ 676 (771)
|||+++++|.++. .. +++.++..++.|++.|++|||+. +++||||||+||+++.++.++++|||+++.....
T Consensus 80 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~ 156 (258)
T smart00219 80 MEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNCLVGENLVVKISDFGLSRDLYDD 156 (258)
T ss_pred EeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcC---CeeecccccceEEEccCCeEEEcccCCceecccc
Confidence 9999999997662 22 89999999999999999999985 9999999999999999999999999999866543
Q ss_pred cCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhhhcCc
Q 041479 677 MSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQVLDP 740 (771)
Q Consensus 677 ~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 740 (771)
.... .....+++.|+||| +|+++|||++ |+.||... ....+.+..............+.
T Consensus 157 ~~~~---~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 231 (258)
T smart00219 157 DYYK---KKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGM--SNEEVLEYLKKGYRLPKPENCPP 231 (258)
T ss_pred cccc---cccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCC--CHHHHHHHHhcCCCCCCCCcCCH
Confidence 2211 11223778999999 6999999999 88888652 12223333333333333344556
Q ss_pred cccccCcccChhchhhcCCHHHHHHHH
Q 041479 741 LFLVGGVQEGEETAEENIKKGQIRESL 767 (771)
Q Consensus 741 ~~~~~~~~cl~~~p~~Rpt~~~vl~~L 767 (771)
.+.....+|+..||++|||+.++++.|
T Consensus 232 ~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 232 EIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred HHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 666677799999999999999998764
No 278
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.96 E-value=4.9e-29 Score=260.77 Aligned_cols=229 Identities=23% Similarity=0.333 Sum_probs=176.2
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeeccc----------hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCc
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ----------RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGN 595 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~----------~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~ 595 (771)
...+|+|.+|.||+|....+++.||||.++... ....+.+.+|+.++++++||||+++++++...+
T Consensus 6 ~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~---- 81 (272)
T cd06629 6 GELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE---- 81 (272)
T ss_pred cceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC----
Confidence 446899999999999998888899999985421 112357889999999999999999999987765
Q ss_pred eeEEEEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccc
Q 041479 596 YFRALVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRF 672 (771)
Q Consensus 596 ~~~~lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~ 672 (771)
..++||||+++|+|.++ ...+++..+..++.|++.|+.|||+. +++||||||+||+++.++.+|++|||+++.
T Consensus 82 -~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil~~~~~~~~l~d~~~~~~ 157 (272)
T cd06629 82 -YLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVDADGICKISDFGISKK 157 (272)
T ss_pred -ceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEEEcCCCeEEEeecccccc
Confidence 67999999999999765 24578888999999999999999985 899999999999999999999999999976
Q ss_pred cCcccCCcccccccccccccccchh-----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhC----C
Q 041479 673 IPEVMSSNQCSSVGLKGTVGYATPE-----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMAL----P 731 (771)
Q Consensus 673 ~~~~~~~~~~~~~~~~gt~~y~aPE-----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~----~ 731 (771)
...... ........|+..|+||| +|+++||+++|+.||.+.... ....+...... +
T Consensus 158 ~~~~~~--~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~ 234 (272)
T cd06629 158 SDDIYD--NDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAI-AAMFKLGNKRSAPPIP 234 (272)
T ss_pred cccccc--ccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchH-HHHHHhhccccCCcCC
Confidence 433211 11123345889999999 699999999999998642111 11112111111 1
Q ss_pred CchhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 732 DQILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 732 ~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
......++..+.....+||..+|++|||+.++++
T Consensus 235 ~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (272)
T cd06629 235 PDVSMNLSPVALDFLNACFTINPDNRPTARELLQ 268 (272)
T ss_pred ccccccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence 2222233444555666999999999999999986
No 279
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.96 E-value=1e-28 Score=260.54 Aligned_cols=229 Identities=21% Similarity=0.199 Sum_probs=177.5
Q ss_pred ccccccccccceEEEEEecCCCeEEEEEEeeccc-hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEE
Q 041479 525 LNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYE 603 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e 603 (771)
....+|.|.+|.||++.+..+++.||+|.+.... .....++.+|++++++++||||++++++|.+... ...|+|||
T Consensus 5 ~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~---~~~~lv~e 81 (287)
T cd06621 5 ELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESS---SSIGIAME 81 (287)
T ss_pred EEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCC---CeEEEEEE
Confidence 3456799999999999999888999999996543 2345789999999999999999999999865432 15799999
Q ss_pred eccCCCCCCC-------cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcc
Q 041479 604 FMHHGSLESC-------PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676 (771)
Q Consensus 604 ~~~~g~L~~~-------~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~ 676 (771)
|+++++|.++ ...+++.....++.|++.||+|||+. +++|+||+|+||+++.++.++++|||++......
T Consensus 82 ~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~ 158 (287)
T cd06621 82 YCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNS 158 (287)
T ss_pred ecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecCCeEEEeecccccccccc
Confidence 9999999654 23477888999999999999999985 9999999999999999999999999998754332
Q ss_pred cCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCcccc---CCccHHHHHHhhCCCchh---
Q 041479 677 MSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFT---EGLDLHNFVKMALPDQIL--- 735 (771)
Q Consensus 677 ~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~---~~~~~~~~~~~~~~~~~~--- 735 (771)
.. ....++..|+||| +||++|||++|+.||..... .......+.....+....
T Consensus 159 ~~------~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (287)
T cd06621 159 LA------GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEP 232 (287)
T ss_pred cc------ccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCC
Confidence 21 1234788899999 69999999999999975422 112233333322211111
Q ss_pred ---hhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 736 ---QVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 736 ---~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
...++.+.....+||..+|++|||+.|+++
T Consensus 233 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 233 GNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred CCCCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 112334556667999999999999999986
No 280
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.96 E-value=7e-29 Score=264.26 Aligned_cols=234 Identities=21% Similarity=0.186 Sum_probs=178.3
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEE
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
...+|+|.+|.||+++++..++.||+|.+.... ....+.+.+|+++++.++||||+++++++.+.+ ..++||
T Consensus 6 ~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-----~~~lv~ 80 (305)
T cd05609 6 IKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKR-----HLCMVM 80 (305)
T ss_pred eeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCC-----EEEEEE
Confidence 345789999999999999999999999986543 234567889999999999999999999987766 789999
Q ss_pred EeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCC
Q 041479 603 EFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSS 679 (771)
Q Consensus 603 e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 679 (771)
||+++|+|.++ ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+|++|||+++........
T Consensus 81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~ 157 (305)
T cd05609 81 EYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTT 157 (305)
T ss_pred ecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEEECCCCCEEEeeCCCccccCcCccc
Confidence 99999999766 34578888999999999999999985 8999999999999999999999999998742111000
Q ss_pred -----------cccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCC-C
Q 041479 680 -----------NQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALP-D 732 (771)
Q Consensus 680 -----------~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~-~ 732 (771)
.........|+..|+||| |||++||+++|+.||.+.... ...........+ .
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~-~~~~~~~~~~~~~~ 236 (305)
T cd05609 158 NLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPE-ELFGQVISDDIEWP 236 (305)
T ss_pred cccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhcccCCC
Confidence 001111245788999999 699999999999999643111 112222222222 1
Q ss_pred chhhhcCccccccCcccChhchhhcCCHHHHHHHHH
Q 041479 733 QILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLI 768 (771)
Q Consensus 733 ~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~ 768 (771)
.....+++.+.....+||+.||++||++.++.+.|+
T Consensus 237 ~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~ 272 (305)
T cd05609 237 EGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQ 272 (305)
T ss_pred CccccCCHHHHHHHHHHhccChhhccCccCHHHHHh
Confidence 122244555666777999999999999665555554
No 281
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.96 E-value=6.5e-29 Score=262.64 Aligned_cols=234 Identities=23% Similarity=0.166 Sum_probs=178.5
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhcc-CCCCceeEEEEeecCCCCCceeEEEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNI-RHRNLVKIITACSTSDFQGNYFRALV 601 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~~~~lv 601 (771)
+.....+|+|.+|.||++....+++.||+|++.... ...+.+.+|+.+++++ +||||+++++++...+.......|+|
T Consensus 24 y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~~~~~~~~lv 102 (291)
T cd06639 24 WEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADKLVGGQLWLV 102 (291)
T ss_pred eEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccccCCCeeEEE
Confidence 444456899999999999999888899999986432 2346778899999999 79999999999876543323367999
Q ss_pred EEeccCCCCCCC-------cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccC
Q 041479 602 YEFMHHGSLESC-------PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIP 674 (771)
Q Consensus 602 ~e~~~~g~L~~~-------~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~ 674 (771)
|||+++|+|.++ ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+|++|||+++...
T Consensus 103 ~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nili~~~~~~kl~dfg~~~~~~ 179 (291)
T cd06639 103 LELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTTEGGVKLVDFGVSAQLT 179 (291)
T ss_pred EEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEeecccchhcc
Confidence 999999999654 34678899999999999999999985 99999999999999999999999999988654
Q ss_pred cccCCcccccccccccccccchh--------------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCC-c
Q 041479 675 EVMSSNQCSSVGLKGTVGYATPE--------------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPD-Q 733 (771)
Q Consensus 675 ~~~~~~~~~~~~~~gt~~y~aPE--------------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~-~ 733 (771)
.... ......|+..|+||| +||++|||++|+.||...... ..+.++.....+. .
T Consensus 180 ~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~-~~~~~~~~~~~~~~~ 254 (291)
T cd06639 180 STRL----RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPV-KTLFKIPRNPPPTLL 254 (291)
T ss_pred cccc----cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHH-HHHHHHhcCCCCCCC
Confidence 3221 112345888999999 599999999999999754221 1122222221111 1
Q ss_pred hhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 734 ILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 734 ~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
........+...+.+||+.+|++||++.|+++
T Consensus 255 ~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 255 HPEKWCRSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred cccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 11122334445666999999999999999986
No 282
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=9e-30 Score=266.35 Aligned_cols=225 Identities=20% Similarity=0.233 Sum_probs=172.6
Q ss_pred ccccccccccceEEEEEecCCCeEEEEEEeecc--chhhHHHHHHHHHHHhccC-CCCceeEEEEeecCCCCCceeEEEE
Q 041479 525 LNVSYESLVKATVYKGILDLDQTFIAVKVLFLH--QRGALKSFMAECQALRNIR-HRNLVKIITACSTSDFQGNYFRALV 601 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~~~~~~lv 601 (771)
....+|.|+.+.||++...+.+ .||+|++... +......|..|+..|.+++ |.+||+|++|-..++ ++|||
T Consensus 365 ilk~iG~GGSSkV~kV~~s~~~-iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~-----~lYmv 438 (677)
T KOG0596|consen 365 ILKQIGSGGSSKVFKVLNSDKQ-IYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDG-----YLYMV 438 (677)
T ss_pred HHHhhcCCCcceeeeeecCCCc-chhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCc-----eEEEE
Confidence 3456899999999999876555 8888887544 3456788999999999996 999999999987766 89999
Q ss_pred EEeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCccc
Q 041479 602 YEFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVM 677 (771)
Q Consensus 602 ~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~ 677 (771)
|||-+ -||.++ ....+...+..|..|++.|+.++|++ ||||.||||.|.|+. .|.+||+|||+|..+....
T Consensus 439 mE~Gd-~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~DT 513 (677)
T KOG0596|consen 439 MECGD-IDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLLV-KGRLKLIDFGIANAIQPDT 513 (677)
T ss_pred eeccc-ccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEEE-eeeEEeeeechhcccCccc
Confidence 99753 466554 22233226889999999999999997 999999999999998 5789999999999876655
Q ss_pred CCcccccccccccccccchh--------------------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCC
Q 041479 678 SSNQCSSVGLKGTVGYATPE--------------------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALP 731 (771)
Q Consensus 678 ~~~~~~~~~~~gt~~y~aPE--------------------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~ 731 (771)
+.. ....-+||+.||+|| +||++|+|+.|+.||.+.... +.++..-.-|
T Consensus 514 TsI--~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~---~aKl~aI~~P 588 (677)
T KOG0596|consen 514 TSI--VKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQ---IAKLHAITDP 588 (677)
T ss_pred cce--eeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHH---HHHHHhhcCC
Confidence 432 234568999999999 699999999999999764211 2222221222
Q ss_pred ---CchhhhcCcc-ccccCcccChhchhhcCCHHHHHH
Q 041479 732 ---DQILQVLDPL-FLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 732 ---~~~~~~~~~~-~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
-+.+++-... +.+++..||+.||.+|||+.++++
T Consensus 589 ~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLq 626 (677)
T KOG0596|consen 589 NHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQ 626 (677)
T ss_pred CccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhc
Confidence 1233333333 446777999999999999999986
No 283
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.96 E-value=6e-29 Score=260.83 Aligned_cols=225 Identities=20% Similarity=0.263 Sum_probs=177.6
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeecc-chhhHHHHHHHHHHHhccC---CCCceeEEEEeecCCCCCceeEEEEE
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLH-QRGALKSFMAECQALRNIR---HRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~---H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
..+|+|.+|.||+|++..+++.||||.+... .....+++.+|++++++++ ||||+++++++.... ..|+||
T Consensus 7 ~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~-----~~~lv~ 81 (277)
T cd06917 7 ELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGP-----RLWIIM 81 (277)
T ss_pred hheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCC-----EEEEEE
Confidence 3579999999999999888889999998654 2345578889999999997 999999999987765 789999
Q ss_pred EeccCCCCCCC--cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCc
Q 041479 603 EFMHHGSLESC--PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSN 680 (771)
Q Consensus 603 e~~~~g~L~~~--~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 680 (771)
||+++++|.++ ...+++.....++.|++.|+.|||+. +|+||||+|+||+++.++.++++|||++........
T Consensus 82 e~~~~~~L~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~-- 156 (277)
T cd06917 82 EYAEGGSVRTLMKAGPIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSS-- 156 (277)
T ss_pred ecCCCCcHHHHHHccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEEEcCCCCEEEccCCceeecCCCcc--
Confidence 99999999766 34678899999999999999999985 999999999999999999999999999986654321
Q ss_pred ccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchh-hhcCcccc
Q 041479 681 QCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQIL-QVLDPLFL 743 (771)
Q Consensus 681 ~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 743 (771)
......|+..|+||| +||++|||++|+.||.+..... .........+.... ...+..+.
T Consensus 157 --~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 232 (277)
T cd06917 157 --KRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFR--AMMLIPKSKPPRLEDNGYSKLLR 232 (277)
T ss_pred --ccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhh--hhhccccCCCCCCCcccCCHHHH
Confidence 122346889999999 6999999999999996532211 11111111122111 12444555
Q ss_pred ccCcccChhchhhcCCHHHHHH
Q 041479 744 VGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 744 ~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
..+.+||..||++||++.+++.
T Consensus 233 ~~i~~~l~~~p~~R~~~~~il~ 254 (277)
T cd06917 233 EFVAACLDEEPKERLSAEELLK 254 (277)
T ss_pred HHHHHHcCCCcccCcCHHHHhh
Confidence 5667999999999999999975
No 284
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.96 E-value=6.7e-29 Score=261.30 Aligned_cols=227 Identities=22% Similarity=0.230 Sum_probs=171.4
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeeccc-hhhHHHHHHHHHH-HhccCCCCceeEEEEeecCCCCCceeEEEEEE
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ-RGALKSFMAECQA-LRNIRHRNLVKIITACSTSDFQGNYFRALVYE 603 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~-l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e 603 (771)
...+|+|.+|.||+|+++.+++.||+|++.... .....++..|+.+ ++..+||||+++++++...+ ..|+|||
T Consensus 6 ~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~-----~~~lv~e 80 (283)
T cd06617 6 IEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREG-----DVWICME 80 (283)
T ss_pred EEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCC-----cEEEEhh
Confidence 345799999999999999989999999996542 2234566667765 56678999999999998766 6799999
Q ss_pred eccCCCCCCC-------cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcc
Q 041479 604 FMHHGSLESC-------PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676 (771)
Q Consensus 604 ~~~~g~L~~~-------~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~ 676 (771)
|++ |+|.++ ...+++..+..++.|++.|++|||+. .+++||||||+||+++.++.+||+|||+++.....
T Consensus 81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~--~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~ 157 (283)
T cd06617 81 VMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSK--LSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDS 157 (283)
T ss_pred hhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEeecccccccccc
Confidence 997 565433 23578999999999999999999974 38999999999999999999999999999865432
Q ss_pred cCCcccccccccccccccchh-------------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhh
Q 041479 677 MSSNQCSSVGLKGTVGYATPE-------------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQV 737 (771)
Q Consensus 677 ~~~~~~~~~~~~gt~~y~aPE-------------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 737 (771)
. ......|+..|+||| +||++|||++|+.||.+.......+........+.-..+.
T Consensus 158 ~-----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (283)
T cd06617 158 V-----AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEEPSPQLPAEK 232 (283)
T ss_pred c-----ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhcCCCCCCccc
Confidence 1 112235788999999 5999999999999996432111122222222222111223
Q ss_pred cCccccccCcccChhchhhcCCHHHHHH
Q 041479 738 LDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 738 ~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
++..+.....+||..+|++|||+.++++
T Consensus 233 ~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 233 FSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred cCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 4455556667999999999999999985
No 285
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.96 E-value=1.2e-28 Score=255.12 Aligned_cols=225 Identities=22% Similarity=0.242 Sum_probs=178.5
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEE
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYE 603 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e 603 (771)
...+|+|.+|.||++....+++.||||.+.... ....+.+.+|++++++++||||+++++++...+ ..++|||
T Consensus 5 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-----~~~lv~e 79 (256)
T cd08220 5 IRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDK-----ALMIVME 79 (256)
T ss_pred EEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCC-----EEEEEEe
Confidence 345799999999999999899999999996542 344678999999999999999999999887665 7899999
Q ss_pred eccCCCCCCC-----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCC-CceEEecccCccccCccc
Q 041479 604 FMHHGSLESC-----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDND-MTAHMGDFGLTRFIPEVM 677 (771)
Q Consensus 604 ~~~~g~L~~~-----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~-~~~kl~DfGla~~~~~~~ 677 (771)
|+++++|.++ ...+++..+..++.+++.|++|||+. +|+||||||+||+++.+ +.+|++|||.++......
T Consensus 80 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~ 156 (256)
T cd08220 80 YAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS 156 (256)
T ss_pred cCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc
Confidence 9999999766 23478889999999999999999986 99999999999999854 468999999998654322
Q ss_pred CCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCccc
Q 041479 678 SSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLF 742 (771)
Q Consensus 678 ~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 742 (771)
. .....|+..|+||| +|+++|++++|+.||..... ................+.+++.+
T Consensus 157 ~-----~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l 229 (256)
T cd08220 157 K-----AYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANL--PALVLKIMSGTFAPISDRYSPDL 229 (256)
T ss_pred c-----ccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCch--HHHHHHHHhcCCCCCCCCcCHHH
Confidence 1 12245888999999 69999999999999865311 11222222222233344456666
Q ss_pred cccCcccChhchhhcCCHHHHHH
Q 041479 743 LVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 743 ~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
.....+||..+|++|||+.|+++
T Consensus 230 ~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 230 RQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred HHHHHHHccCChhhCCCHHHHhh
Confidence 66777999999999999999986
No 286
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.96 E-value=1.1e-28 Score=255.52 Aligned_cols=225 Identities=18% Similarity=0.176 Sum_probs=178.0
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEe
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEF 604 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~ 604 (771)
..+|+|.+|+||+++...+++.||+|.+.... ....+++.+|++++++++||||+++++++.+.+ ..++||||
T Consensus 6 ~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-----~~~lv~e~ 80 (256)
T cd08218 6 KKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENG-----NLYIVMDY 80 (256)
T ss_pred EEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCC-----eEEEEEec
Confidence 45799999999999999888899999996542 334568999999999999999999999987766 78999999
Q ss_pred ccCCCCCCC-----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCC
Q 041479 605 MHHGSLESC-----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSS 679 (771)
Q Consensus 605 ~~~g~L~~~-----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 679 (771)
+++++|.+. ...+++.++..++.|++.|++|||+. +++|+||+|+||+++.++.++++|||++........
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~- 156 (256)
T cd08218 81 CEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVE- 156 (256)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEEeeccceeecCcchh-
Confidence 999998665 22468888999999999999999985 899999999999999999999999999976543221
Q ss_pred cccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCccccc
Q 041479 680 NQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFLV 744 (771)
Q Consensus 680 ~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 744 (771)
......|++.|+||| |||++||+++|+.||...... ....++..... ...+...+..+..
T Consensus 157 ---~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~ 231 (256)
T cd08218 157 ---LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMK-NLVLKIIRGSY-PPVSSHYSYDLRN 231 (256)
T ss_pred ---hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHH-HHHHHHhcCCC-CCCcccCCHHHHH
Confidence 111235788999999 699999999999998642111 11222222222 2233344555666
Q ss_pred cCcccChhchhhcCCHHHHHH
Q 041479 745 GGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 745 ~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
...+||+.+|++||+|.+|++
T Consensus 232 li~~~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 232 LVSQLFKRNPRDRPSVNSILE 252 (256)
T ss_pred HHHHHhhCChhhCcCHHHHhh
Confidence 677999999999999999986
No 287
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.96 E-value=1.1e-28 Score=264.26 Aligned_cols=230 Identities=23% Similarity=0.220 Sum_probs=178.6
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeeccch---hhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEE
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLHQR---GALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYE 603 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e 603 (771)
..+|+|.+|+||+|+...+++.||+|.+..... ...+.+..|+++++.++||||+++++++.+.. ..|+|||
T Consensus 7 ~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-----~~~lv~e 81 (316)
T cd05574 7 KLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTET-----YLCLVMD 81 (316)
T ss_pred eeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCC-----EEEEEEE
Confidence 457999999999999998888999999965432 34567899999999999999999999987766 7899999
Q ss_pred eccCCCCCCC-----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccC
Q 041479 604 FMHHGSLESC-----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMS 678 (771)
Q Consensus 604 ~~~~g~L~~~-----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 678 (771)
|+.+++|.++ ...+++..+..++.|++.||+|||+. +++||||||+||+++.++.++++|||++........
T Consensus 82 ~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~ 158 (316)
T cd05574 82 YCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPP 158 (316)
T ss_pred ecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHHeEEcCCCCEEEeecchhhccccccc
Confidence 9999999776 24588899999999999999999985 899999999999999999999999999875432211
Q ss_pred Cc-------------------------ccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccC
Q 041479 679 SN-------------------------QCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTE 718 (771)
Q Consensus 679 ~~-------------------------~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~ 718 (771)
.. ........||..|+||| +|+++||+++|+.||.....
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~- 237 (316)
T cd05574 159 PVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSNR- 237 (316)
T ss_pred ccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCch-
Confidence 00 01112346899999999 69999999999999965321
Q ss_pred CccHHHHHHhhCCCchhhhcCccccccCcccChhchhhcCC----HHHHHH
Q 041479 719 GLDLHNFVKMALPDQILQVLDPLFLVGGVQEGEETAEENIK----KGQIRE 765 (771)
Q Consensus 719 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt----~~~vl~ 765 (771)
...+.+.............++..+.....+|++.||++||| +.++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 238 DETFSNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ 288 (316)
T ss_pred HHHHHHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence 11222222222222222224556666777999999999999 666664
No 288
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=99.96 E-value=6.4e-29 Score=267.47 Aligned_cols=228 Identities=18% Similarity=0.121 Sum_probs=170.6
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEE
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
...+|+|.+|+||+++++.+++.||||++.... ....+.+.+|+.++..++|+||+++++++.+.+ ..|+||
T Consensus 6 ~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~-----~~~lv~ 80 (331)
T cd05624 6 IKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDEN-----YLYLVM 80 (331)
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC-----EEEEEE
Confidence 346899999999999999999999999996432 233456888999999999999999999988776 789999
Q ss_pred EeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccC
Q 041479 603 EFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMS 678 (771)
Q Consensus 603 e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 678 (771)
||+++|+|.++ ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 81 Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 157 (331)
T cd05624 81 DYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGT 157 (331)
T ss_pred eCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEEEcCCCCEEEEeccceeeccCCCc
Confidence 99999999776 24578888999999999999999985 999999999999999999999999999976543221
Q ss_pred Ccccccccccccccccchh--------------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchh---
Q 041479 679 SNQCSSVGLKGTVGYATPE--------------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQIL--- 735 (771)
Q Consensus 679 ~~~~~~~~~~gt~~y~aPE--------------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~--- 735 (771)
......+||+.||||| +||++|||++|+.||.+.... ...........+...+
T Consensus 158 ---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~-~~~~~i~~~~~~~~~p~~~ 233 (331)
T cd05624 158 ---VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLV-ETYGKIMNHEERFQFPSHI 233 (331)
T ss_pred ---eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHH-HHHHHHHcCCCcccCCCcc
Confidence 1122346999999999 599999999999999643211 1111222111111111
Q ss_pred hhcCccccccCcccChhchhh--cCCHHHHHH
Q 041479 736 QVLDPLFLVGGVQEGEETAEE--NIKKGQIRE 765 (771)
Q Consensus 736 ~~~~~~~~~~~~~cl~~~p~~--Rpt~~~vl~ 765 (771)
..++........+|+..++++ |+++.++++
T Consensus 234 ~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~ 265 (331)
T cd05624 234 TDVSEEAKDLIQRLICSRERRLGQNGIEDFKK 265 (331)
T ss_pred ccCCHHHHHHHHHHccCchhhcCCCCHHHHhc
Confidence 112333444445666654443 568887764
No 289
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=99.96 E-value=5.3e-29 Score=269.80 Aligned_cols=229 Identities=22% Similarity=0.230 Sum_probs=171.6
Q ss_pred ccccccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCC-CCceeEEEE
Q 041479 525 LNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDF-QGNYFRALV 601 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~-~~~~~~~lv 601 (771)
....+|+|.+|+||+|+...+++.||||++.... ....+.+.+|++++++++||||+++++++..... ......|++
T Consensus 19 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~ 98 (343)
T cd07878 19 NLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFNEVYLV 98 (343)
T ss_pred hheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccCcEEEE
Confidence 3456899999999999999888899999986432 2334678899999999999999999998754321 111256899
Q ss_pred EEeccCCCCCCC--cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCC
Q 041479 602 YEFMHHGSLESC--PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSS 679 (771)
Q Consensus 602 ~e~~~~g~L~~~--~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 679 (771)
||++ +++|.+. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 99 ~~~~-~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~--- 171 (343)
T cd07878 99 TNLM-GADLNNIVKCQKLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRILDFGLARQADDE--- 171 (343)
T ss_pred eecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEEECCCCCEEEcCCccceecCCC---
Confidence 9998 6788655 34688999999999999999999986 9999999999999999999999999999865432
Q ss_pred cccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhh--------------
Q 041479 680 NQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMA-------------- 729 (771)
Q Consensus 680 ~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~-------------- 729 (771)
..+..||+.|+||| +||++|||++|+.||.+..... .+..+....
T Consensus 172 ----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 246 (343)
T cd07878 172 ----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYID-QLKRIMEVVGTPSPEVLKKISSE 246 (343)
T ss_pred ----cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHH-HHHHHHHHhCCCCHHHHHhcchh
Confidence 12346899999999 6999999999999996421100 011111000
Q ss_pred --------CC---C-c---hhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 730 --------LP---D-Q---ILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 730 --------~~---~-~---~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
.+ . . .....++.+.....+|++.||++|||+.|+++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~ 297 (343)
T cd07878 247 HARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALA 297 (343)
T ss_pred hHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 00 0 0 00112233334555999999999999999985
No 290
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.96 E-value=8e-29 Score=266.93 Aligned_cols=229 Identities=18% Similarity=0.111 Sum_probs=171.2
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEE
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
...+|+|.+|+||+++++.+++.||+|++.... ....+.+..|+.++..++|++|+++++++.+.+ ..|+||
T Consensus 6 ~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-----~~~lv~ 80 (332)
T cd05623 6 LKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDEN-----NLYLVM 80 (332)
T ss_pred EEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCC-----EEEEEE
Confidence 456899999999999999999899999996432 233456889999999999999999999987766 789999
Q ss_pred EeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccC
Q 041479 603 EFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMS 678 (771)
Q Consensus 603 e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 678 (771)
||+++|+|.++ ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 81 ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~ 157 (332)
T cd05623 81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGT 157 (332)
T ss_pred eccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEeecchheecccCCc
Confidence 99999999776 24578888999999999999999985 999999999999999999999999999875433221
Q ss_pred Ccccccccccccccccchh--------------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCC---Cchh
Q 041479 679 SNQCSSVGLKGTVGYATPE--------------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALP---DQIL 735 (771)
Q Consensus 679 ~~~~~~~~~~gt~~y~aPE--------------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~---~~~~ 735 (771)
......+||+.||||| |||++|||++|+.||.+.... ............ +...
T Consensus 158 ---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~-~~~~~i~~~~~~~~~p~~~ 233 (332)
T cd05623 158 ---VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLV-ETYGKIMNHKERFQFPAQV 233 (332)
T ss_pred ---ceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHH-HHHHHHhCCCccccCCCcc
Confidence 1122346999999999 599999999999999653111 111112111111 1111
Q ss_pred hhcCccccccCcccCh--hchhhcCCHHHHHHH
Q 041479 736 QVLDPLFLVGGVQEGE--ETAEENIKKGQIRES 766 (771)
Q Consensus 736 ~~~~~~~~~~~~~cl~--~~p~~Rpt~~~vl~~ 766 (771)
..+++.+.....+|+. +++..|+++.|+++.
T Consensus 234 ~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 234 TDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred ccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 2234444444445554 444447899988753
No 291
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.96 E-value=8.8e-29 Score=263.73 Aligned_cols=223 Identities=19% Similarity=0.200 Sum_probs=173.6
Q ss_pred ccccccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEE
Q 041479 525 LNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALV 601 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv 601 (771)
....+|+|.+|+||+|+...+++.||+|.+.... ....+++.+|+++++.++||||+++++++...+ ..|+|
T Consensus 19 ~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~-----~~~lv 93 (307)
T cd06607 19 DLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREH-----TAWLV 93 (307)
T ss_pred hheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCC-----eEEEE
Confidence 3456899999999999999888899999986432 234467899999999999999999999998766 67999
Q ss_pred EEeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCccc
Q 041479 602 YEFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVM 677 (771)
Q Consensus 602 ~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~ 677 (771)
|||+++ ++.+. ...+++..+..++.|++.||.|||+. +|+||||+|+||++++++.+||+|||++.......
T Consensus 94 ~e~~~g-~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~~ 169 (307)
T cd06607 94 MEYCLG-SASDILEVHKKPLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNILLTEPGTVKLADFGSASLVSPAN 169 (307)
T ss_pred HHhhCC-CHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEECCCCCEEEeecCcceecCCCC
Confidence 999975 54332 34688999999999999999999985 89999999999999999999999999987543221
Q ss_pred CCcccccccccccccccchh------------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcC
Q 041479 678 SSNQCSSVGLKGTVGYATPE------------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLD 739 (771)
Q Consensus 678 ~~~~~~~~~~~gt~~y~aPE------------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 739 (771)
...|++.|+||| ||+++||++||+.||.+...... .........+......++
T Consensus 170 --------~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 240 (307)
T cd06607 170 --------SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA-LYHIAQNDSPTLSSNDWS 240 (307)
T ss_pred --------CccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHH-HHHHhcCCCCCCCchhhC
Confidence 235788999999 69999999999999865321111 111111111211122234
Q ss_pred ccccccCcccChhchhhcCCHHHHHH
Q 041479 740 PLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 740 ~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
..+.....+||..+|++||++.+++.
T Consensus 241 ~~~~~li~~~l~~~p~~Rp~~~~il~ 266 (307)
T cd06607 241 DYFRNFVDSCLQKIPQDRPSSEELLK 266 (307)
T ss_pred HHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 45556667999999999999999986
No 292
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.96 E-value=2.4e-29 Score=268.26 Aligned_cols=225 Identities=23% Similarity=0.228 Sum_probs=182.2
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRAL 600 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~l 600 (771)
+....++|.|.||+|..|++..++..||||.++... ....+.+.+|+++|..++|||||+++.+..+.. .+|+
T Consensus 58 y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~-----~lyl 132 (596)
T KOG0586|consen 58 YVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEA-----TLYL 132 (596)
T ss_pred eeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecc-----eeEE
Confidence 445678999999999999999999999999997664 334466999999999999999999999988776 7899
Q ss_pred EEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCccc
Q 041479 601 VYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVM 677 (771)
Q Consensus 601 v~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~ 677 (771)
||||+.+|.++++ ..++...+...++.|+.+|++|||+. .|||||||++|||++.+..+||+|||++.++....
T Consensus 133 V~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k---~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~~ 209 (596)
T KOG0586|consen 133 VMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSK---NIVHRDLKAENILLDENMNIKIADFGFSTFFDYGL 209 (596)
T ss_pred EEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhc---ceeccccchhhcccccccceeeeccccceeecccc
Confidence 9999999999887 34566688889999999999999986 89999999999999999999999999998876433
Q ss_pred CCcccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCC--CchhhhcC
Q 041479 678 SSNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALP--DQILQVLD 739 (771)
Q Consensus 678 ~~~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 739 (771)
...+.+|++.|.||| +|+++|-++.|..||++.. +.+.....+. .+++-.+.
T Consensus 210 -----~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~-----lk~Lr~rvl~gk~rIp~~ms 279 (596)
T KOG0586|consen 210 -----MLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQN-----LKELRPRVLRGKYRIPFYMS 279 (596)
T ss_pred -----cccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcc-----cccccchheeeeecccceee
Confidence 233578999999999 5999999999999998642 2222112111 22333344
Q ss_pred ccccccCcccChhchhhcCCHHHHHH
Q 041479 740 PLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 740 ~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
.+......+.+..+|++|++++++.+
T Consensus 280 ~dce~lLrk~lvl~Pskr~~~dqim~ 305 (596)
T KOG0586|consen 280 CDCEDLLRKFLVLNPSKRGPCDQIMK 305 (596)
T ss_pred chhHHHHHHhhccCccccCCHHHhhh
Confidence 44444444778999999999999875
No 293
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.96 E-value=1.3e-28 Score=259.62 Aligned_cols=226 Identities=21% Similarity=0.247 Sum_probs=173.9
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEe
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEF 604 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~ 604 (771)
..+|+|.+|.||+|+++.+++.||+|++.... ....+.+.+|++++++++||||+++++++.... ..++||||
T Consensus 7 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-----~~~~v~e~ 81 (286)
T cd07847 7 SKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKR-----KLHLVFEY 81 (286)
T ss_pred eeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCC-----EEEEEEec
Confidence 45799999999999999888899999986442 223467889999999999999999999988766 78999999
Q ss_pred ccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCcc
Q 041479 605 MHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQ 681 (771)
Q Consensus 605 ~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 681 (771)
++++.+... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 82 ~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~--- 155 (286)
T cd07847 82 CDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPENILITKQGQIKLCDFGFARILTGPGD--- 155 (286)
T ss_pred cCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhhEEEcCCCcEEECccccceecCCCcc---
Confidence 999887655 33588999999999999999999985 999999999999999999999999999986644321
Q ss_pred cccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHh-----------------
Q 041479 682 CSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKM----------------- 728 (771)
Q Consensus 682 ~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~----------------- 728 (771)
......++..|+||| +||++|||++|+.||.+....+. ...+...
T Consensus 156 -~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 233 (286)
T cd07847 156 -DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQ-LYLIRKTLGDLIPRHQQIFSTNQF 233 (286)
T ss_pred -cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHhCCCChHHhhhcccccc
Confidence 111235788999999 69999999999999965322111 1111100
Q ss_pred ----hCCCc--------hhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 729 ----ALPDQ--------ILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 729 ----~~~~~--------~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
..+.. ..+.++..+.....+||..+|++|||+.|++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 234 FKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred cccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 00000 00122333445566999999999999999875
No 294
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.96 E-value=1e-28 Score=261.10 Aligned_cols=225 Identities=20% Similarity=0.310 Sum_probs=180.9
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEecc
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMH 606 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~~~ 606 (771)
..+|+|.+|.||++..+.+++.||||++........+.+.+|+.+++.++||||+++++++...+ ..++||||++
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-----~~~lv~e~~~ 100 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGD-----ELWVVMEFLE 100 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCC-----EEEEEEecCC
Confidence 45899999999999999888999999986655555678999999999999999999999988776 7899999999
Q ss_pred CCCCCCC--cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCccccc
Q 041479 607 HGSLESC--PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSS 684 (771)
Q Consensus 607 ~g~L~~~--~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~ 684 (771)
+++|.++ ...+++.....++.|++.|++|||+. +++||||||+||+++.++.++++|||++........ ..
T Consensus 101 ~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~----~~ 173 (292)
T cd06657 101 GGALTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP----RR 173 (292)
T ss_pred CCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEcccccceecccccc----cc
Confidence 9999766 34578899999999999999999986 899999999999999999999999999875433211 11
Q ss_pred ccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCch--hhhcCccccccCc
Q 041479 685 VGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQI--LQVLDPLFLVGGV 747 (771)
Q Consensus 685 ~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 747 (771)
....|++.|+||| +|+++||+++|+.||... .............+... ...+++.+.....
T Consensus 174 ~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 251 (292)
T cd06657 174 KSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNE--PPLKAMKMIRDNLPPKLKNLHKVSPSLKGFLD 251 (292)
T ss_pred cccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC--CHHHHHHHHHhhCCcccCCcccCCHHHHHHHH
Confidence 2345889999999 699999999999998642 11222233333333221 2234555555667
Q ss_pred ccChhchhhcCCHHHHHH
Q 041479 748 QEGEETAEENIKKGQIRE 765 (771)
Q Consensus 748 ~cl~~~p~~Rpt~~~vl~ 765 (771)
+||..+|.+||++.++++
T Consensus 252 ~~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 252 RLLVRDPAQRATAAELLK 269 (292)
T ss_pred HHHhCCcccCcCHHHHhc
Confidence 999999999999999986
No 295
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.96 E-value=1.7e-28 Score=257.58 Aligned_cols=223 Identities=19% Similarity=0.199 Sum_probs=171.0
Q ss_pred ccccccceEEEEEecCCCeEEEEEEeeccch---hhHHHHHHHHH---HHhccCCCCceeEEEEeecCCCCCceeEEEEE
Q 041479 529 YESLVKATVYKGILDLDQTFIAVKVLFLHQR---GALKSFMAECQ---ALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 529 l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~---~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
+|+|.+|.||+|+...+++.||+|.+..... .....+..|.. .++...||+|+++++++.+.+ ..++||
T Consensus 2 ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-----~~~~v~ 76 (278)
T cd05606 2 IGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD-----KLSFIL 76 (278)
T ss_pred cccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCC-----EEEEEE
Confidence 6899999999999988888999999865421 12223444443 344457999999999988766 789999
Q ss_pred EeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCC
Q 041479 603 EFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSS 679 (771)
Q Consensus 603 e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 679 (771)
||+++|+|.++ ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+|++|||+++......
T Consensus 77 e~~~g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~-- 151 (278)
T cd05606 77 DLMNGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK-- 151 (278)
T ss_pred ecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHEEECCCCCEEEccCcCccccCccC--
Confidence 99999999765 34588999999999999999999985 89999999999999999999999999987553321
Q ss_pred cccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCcccc
Q 041479 680 NQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFL 743 (771)
Q Consensus 680 ~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 743 (771)
.....|+..|+||| +||++|||++|+.||.+................+...+...++.+.
T Consensus 152 ----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 227 (278)
T cd05606 152 ----PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELR 227 (278)
T ss_pred ----CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhccCCCCCCcCCHHHH
Confidence 12346899999999 6999999999999997642222111111222222333444456666
Q ss_pred ccCcccChhchhhcC-----CHHHHHH
Q 041479 744 VGGVQEGEETAEENI-----KKGQIRE 765 (771)
Q Consensus 744 ~~~~~cl~~~p~~Rp-----t~~~vl~ 765 (771)
....+|+..+|++|| ++.++++
T Consensus 228 ~li~~~l~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 228 SLLEGLLQRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred HHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence 667799999999999 9999875
No 296
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.96 E-value=1.1e-28 Score=264.15 Aligned_cols=177 Identities=21% Similarity=0.263 Sum_probs=141.4
Q ss_pred ccccccccceEEEEEecC--CCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEe
Q 041479 527 VSYESLVKATVYKGILDL--DQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEF 604 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~--~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~ 604 (771)
..+|+|.+|+||+|+.++ ++..||+|.+.... ....+.+|++++++++||||+++++++..... ...++||||
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~---~~~~lv~e~ 81 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSD---RKVWLLFDY 81 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCC---CeEEEEEee
Confidence 358999999999999765 44689999885432 23567899999999999999999999865332 267999999
Q ss_pred ccCCCCCCC------------cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeee----CCCCceEEeccc
Q 041479 605 MHHGSLESC------------PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLL----DNDMTAHMGDFG 668 (771)
Q Consensus 605 ~~~g~L~~~------------~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl----~~~~~~kl~DfG 668 (771)
+++ ++.+. ...+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||
T Consensus 82 ~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG 157 (317)
T cd07867 82 AEH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMG 157 (317)
T ss_pred eCC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEccCCCCCCcEEEeecc
Confidence 975 44222 12478888999999999999999985 89999999999999 566789999999
Q ss_pred CccccCcccCCcccccccccccccccchh----------------HHHHHHHHHhCCCCCC
Q 041479 669 LTRFIPEVMSSNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTS 713 (771)
Q Consensus 669 la~~~~~~~~~~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~ 713 (771)
+++........ ........||+.|+||| +||++|||+||+.||.
T Consensus 158 ~a~~~~~~~~~-~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~ 217 (317)
T cd07867 158 FARLFNSPLKP-LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 217 (317)
T ss_pred ceeccCCCccc-ccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcc
Confidence 99866443221 11223456899999999 6999999999999985
No 297
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.96 E-value=9.9e-29 Score=258.58 Aligned_cols=234 Identities=21% Similarity=0.227 Sum_probs=180.1
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhcc-CCCCceeEEEEeecCCC-CCceeEEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNI-RHRNLVKIITACSTSDF-QGNYFRAL 600 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~-~~~~~~~l 600 (771)
+.....+|+|.+|+||+|..+.+++.||+|++..... ..+++.+|+++++++ +||||+++++++.+... ......++
T Consensus 8 y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~l 86 (275)
T cd06608 8 FELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDDQLWL 86 (275)
T ss_pred eeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcceEEEE
Confidence 3445668999999999999988888999999865543 346799999999999 69999999999876542 22336799
Q ss_pred EEEeccCCCCCCC-------cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCcccc
Q 041479 601 VYEFMHHGSLESC-------PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673 (771)
Q Consensus 601 v~e~~~~g~L~~~-------~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~ 673 (771)
||||+++++|.++ ...+++..+..++.|++.||+|||+. +++||||+|+||+++.++.+|++|||++...
T Consensus 87 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~ 163 (275)
T cd06608 87 VMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVKLVDFGVSAQL 163 (275)
T ss_pred EEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEEccCCeEEECCCccceec
Confidence 9999999998655 24678889999999999999999985 8999999999999999999999999998765
Q ss_pred CcccCCcccccccccccccccchh--------------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCC-
Q 041479 674 PEVMSSNQCSSVGLKGTVGYATPE--------------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPD- 732 (771)
Q Consensus 674 ~~~~~~~~~~~~~~~gt~~y~aPE--------------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~- 732 (771)
..... ......|++.|+||| +||++||+++|+.||.+.... ....+......+.
T Consensus 164 ~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~ 238 (275)
T cd06608 164 DSTLG----RRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPM-RALFKIPRNPPPTL 238 (275)
T ss_pred ccchh----hhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchH-HHHHHhhccCCCCC
Confidence 43221 122345889999999 599999999999999653221 1222222222211
Q ss_pred chhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 733 QILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 733 ~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
......+..+.....+||..||++|||+.++++
T Consensus 239 ~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 239 KSPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred CchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 111223445556667999999999999999985
No 298
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.96 E-value=1.4e-28 Score=256.28 Aligned_cols=230 Identities=23% Similarity=0.245 Sum_probs=180.9
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeeccc-hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEe
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEF 604 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~ 604 (771)
...+|+|.+|+||+|....++..||+|++.... ....+.+.+|+++++.++|+||+++++.+...+ ..++||||
T Consensus 6 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-----~~~iv~e~ 80 (267)
T cd06610 6 IEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGD-----ELWLVMPY 80 (267)
T ss_pred eeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCC-----EEEEEEec
Confidence 345799999999999998888899999986443 235678999999999999999999999987766 78999999
Q ss_pred ccCCCCCCCc------ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccC
Q 041479 605 MHHGSLESCP------RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMS 678 (771)
Q Consensus 605 ~~~g~L~~~~------~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 678 (771)
+++++|.+.. ..+++.....++.|++.|++|||+. +|+||||||+||++++++.+|++|||++........
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~ 157 (267)
T cd06610 81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGD 157 (267)
T ss_pred cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccchHHHhccCcc
Confidence 9999987662 3478889999999999999999986 899999999999999999999999999876654332
Q ss_pred Ccccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchh-----hh
Q 041479 679 SNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQIL-----QV 737 (771)
Q Consensus 679 ~~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 737 (771)
..........|+..|+||| +||++|||++|+.||.+..... .+.+......+ ... ..
T Consensus 158 ~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~ 235 (267)
T cd06610 158 RTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMK-VLMLTLQNDPP-SLETGADYKK 235 (267)
T ss_pred ccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhh-hHHHHhcCCCC-CcCCcccccc
Confidence 2111223346899999999 6999999999999997543221 23333332221 111 13
Q ss_pred cCccccccCcccChhchhhcCCHHHHHH
Q 041479 738 LDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 738 ~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
+++.+.....+|+..||++|||+.++++
T Consensus 236 ~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 236 YSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred ccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 3445556667999999999999999985
No 299
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.96 E-value=1.5e-28 Score=263.12 Aligned_cols=224 Identities=19% Similarity=0.199 Sum_probs=178.0
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEE
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
...+|+|.+|+||+|+...+++.||+|.+.... ....+++.+|++++++++|||++++++++.+.+ ..++||
T Consensus 30 ~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-----~~~lv~ 104 (317)
T cd06635 30 LREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREH-----TAWLVM 104 (317)
T ss_pred hheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCC-----eEEEEE
Confidence 445899999999999998888899999986432 334567899999999999999999999998776 679999
Q ss_pred EeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccC
Q 041479 603 EFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMS 678 (771)
Q Consensus 603 e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 678 (771)
||+++ ++.+. ...+++.++..++.|++.|+.|||+. +|+||||+|+||+++.++.+|++|||++......
T Consensus 105 e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~-- 178 (317)
T cd06635 105 EYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASIASPA-- 178 (317)
T ss_pred eCCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcccEEECCCCCEEEecCCCccccCCc--
Confidence 99975 65443 34588999999999999999999985 8999999999999999999999999998754321
Q ss_pred Ccccccccccccccccchh------------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCc
Q 041479 679 SNQCSSVGLKGTVGYATPE------------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDP 740 (771)
Q Consensus 679 ~~~~~~~~~~gt~~y~aPE------------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 740 (771)
....|++.|+||| +||++|||++|+.||.+... ......+.....+......+++
T Consensus 179 ------~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 251 (317)
T cd06635 179 ------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-MSALYHIAQNESPTLQSNEWSD 251 (317)
T ss_pred ------ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccH-HHHHHHHHhccCCCCCCccccH
Confidence 1235888999999 59999999999999865321 1123333333333333334455
Q ss_pred cccccCcccChhchhhcCCHHHHHHHH
Q 041479 741 LFLVGGVQEGEETAEENIKKGQIRESL 767 (771)
Q Consensus 741 ~~~~~~~~cl~~~p~~Rpt~~~vl~~L 767 (771)
.+...+.+||+.+|.+||++.++++..
T Consensus 252 ~l~~li~~~l~~~p~~Rpt~~~il~~~ 278 (317)
T cd06635 252 YFRNFVDSCLQKIPQDRPTSEELLKHM 278 (317)
T ss_pred HHHHHHHHHccCCcccCcCHHHHHhCh
Confidence 566667799999999999999998753
No 300
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.96 E-value=1.1e-28 Score=255.29 Aligned_cols=224 Identities=25% Similarity=0.353 Sum_probs=174.4
Q ss_pred cccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEE
Q 041479 524 LLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYE 603 (771)
Q Consensus 524 ~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e 603 (771)
.....+|+|.+|.||+|.. .++.||+|.+.... ..+.+.+|+.++++++||||+++++++.... .++|||
T Consensus 9 ~~~~~lg~g~~g~v~~~~~--~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~------~~~v~e 78 (254)
T cd05083 9 TLGEIIGEGEFGAVLQGEY--TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILHNG------LYIVME 78 (254)
T ss_pred eeeeeeccCCCCceEeccc--CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcCCC------cEEEEE
Confidence 3445679999999999975 45589999985432 3468899999999999999999999986543 589999
Q ss_pred eccCCCCCCC-----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccC
Q 041479 604 FMHHGSLESC-----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMS 678 (771)
Q Consensus 604 ~~~~g~L~~~-----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 678 (771)
|+++|+|.++ ...+++..+..++.|++.|+.|||+. +++||||||+||+++.++.+||+|||+++......
T Consensus 79 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~- 154 (254)
T cd05083 79 LMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESK---KLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGV- 154 (254)
T ss_pred CCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCcEEECCCccceeccccC-
Confidence 9999999765 22478888999999999999999985 99999999999999999999999999987543211
Q ss_pred Ccccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhhhcCccc
Q 041479 679 SNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLF 742 (771)
Q Consensus 679 ~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 742 (771)
.....+..|+||| +||++||+++ |+.||.+... ....+...........+.++..+
T Consensus 155 ------~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 226 (254)
T cd05083 155 ------DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSL--KEVKECVEKGYRMEPPEGCPADV 226 (254)
T ss_pred ------CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCH--HHHHHHHhCCCCCCCCCcCCHHH
Confidence 1123456799999 6999999998 9999865322 12333333333322333445556
Q ss_pred cccCcccChhchhhcCCHHHHHHHHHH
Q 041479 743 LVGGVQEGEETAEENIKKGQIRESLIA 769 (771)
Q Consensus 743 ~~~~~~cl~~~p~~Rpt~~~vl~~L~~ 769 (771)
.....+||..+|++||++.++++.|++
T Consensus 227 ~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 227 YVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred HHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 667779999999999999999999874
No 301
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.96 E-value=2e-28 Score=258.76 Aligned_cols=222 Identities=24% Similarity=0.236 Sum_probs=178.5
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEE
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
...+|+|.+|+||++.+..+++.||+|++.... ....+.+.+|++++++++||||+++++++.... ..|+||
T Consensus 6 ~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~~v~ 80 (290)
T cd05580 6 IKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDS-----NLYLVM 80 (290)
T ss_pred EEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCC-----eEEEEE
Confidence 356799999999999999888899999996432 234577899999999999999999999988776 789999
Q ss_pred EeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCC
Q 041479 603 EFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSS 679 (771)
Q Consensus 603 e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 679 (771)
||+++|+|.++ ...+++..+..++.|++.||.|||+. +|+||||+|+||+++.++.+||+|||+++.....
T Consensus 81 e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~--- 154 (290)
T cd05580 81 EYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSL---DIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR--- 154 (290)
T ss_pred ecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEeeCCCccccCCC---
Confidence 99999999766 35688899999999999999999985 9999999999999999999999999999865432
Q ss_pred cccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCccccc
Q 041479 680 NQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFLV 744 (771)
Q Consensus 680 ~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 744 (771)
.....|++.|+||| +|+++|||++|+.||.... .....+... ......+...++.+..
T Consensus 155 ----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~--~~~~~~~~~-~~~~~~~~~~~~~l~~ 227 (290)
T cd05580 155 ----TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDN--PIQIYEKIL-EGKVRFPSFFSPDAKD 227 (290)
T ss_pred ----CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCC--HHHHHHHHh-cCCccCCccCCHHHHH
Confidence 12345899999999 6999999999999986432 111111111 1122334445666666
Q ss_pred cCcccChhchhhcC-----CHHHHHH
Q 041479 745 GGVQEGEETAEENI-----KKGQIRE 765 (771)
Q Consensus 745 ~~~~cl~~~p~~Rp-----t~~~vl~ 765 (771)
...+||..||++|| +++|+++
T Consensus 228 li~~~l~~~p~~R~~~~~~~~~~l~~ 253 (290)
T cd05580 228 LIRNLLQVDLTKRLGNLKNGVNDIKN 253 (290)
T ss_pred HHHHHccCCHHHccCcccCCHHHHHc
Confidence 77799999999999 7777663
No 302
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.96 E-value=1.8e-28 Score=254.94 Aligned_cols=224 Identities=22% Similarity=0.253 Sum_probs=178.0
Q ss_pred ccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEec
Q 041479 529 YESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFM 605 (771)
Q Consensus 529 l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~~ 605 (771)
+|.|.+|+||+|+...+++.||+|++.... ....+.+.+|+.++++++||||+++++++.+.. ..++||||+
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~lv~e~~ 75 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKK-----YIYMLMEYC 75 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCC-----ccEEEEecC
Confidence 578999999999999888899999996532 234578999999999999999999999987766 679999999
Q ss_pred cCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCccc
Q 041479 606 HHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQC 682 (771)
Q Consensus 606 ~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 682 (771)
++++|.++ ...+++..+..++.|++.||+|+|+. +++|+||||+||+++.++.+|++|||+++......
T Consensus 76 ~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~----- 147 (262)
T cd05572 76 LGGELWTILRDRGLFDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ----- 147 (262)
T ss_pred CCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc-----
Confidence 99999876 33578889999999999999999985 99999999999999999999999999998664432
Q ss_pred ccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCcc-HHHHHHhhCCCchhhhcCccccccC
Q 041479 683 SSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLD-LHNFVKMALPDQILQVLDPLFLVGG 746 (771)
Q Consensus 683 ~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 746 (771)
......|++.|+||| +|+++||+++|+.||......... .............+...++.+....
T Consensus 148 ~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 227 (262)
T cd05572 148 KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLEFPNYIDKAAKDLI 227 (262)
T ss_pred ccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCCCCCcccCHHHHHHH
Confidence 112235788999999 699999999999999654321111 2222211222333344466676777
Q ss_pred cccChhchhhcCC-----HHHHHH
Q 041479 747 VQEGEETAEENIK-----KGQIRE 765 (771)
Q Consensus 747 ~~cl~~~p~~Rpt-----~~~vl~ 765 (771)
.+||..+|++||+ +.|+++
T Consensus 228 ~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 228 KQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred HHHccCChhhCcCCcccCHHHHhc
Confidence 8999999999999 777764
No 303
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.96 E-value=1.3e-28 Score=259.06 Aligned_cols=231 Identities=22% Similarity=0.209 Sum_probs=176.9
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhcc-CCCCceeEEEEeecCCCC-CceeEEEEEE
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNI-RHRNLVKIITACSTSDFQ-GNYFRALVYE 603 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~-~~~~~~lv~e 603 (771)
...+|+|.+|.||+|++...++.||+|++.... ....++..|+.++.++ +||||+++++++...... .....|++||
T Consensus 21 ~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~~~~iv~e 99 (282)
T cd06636 21 VEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE-DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPPGHDDQLWLVME 99 (282)
T ss_pred heeeccCCCeEEEEEEEcCCCcEEEEEEEecCh-HHHHHHHHHHHHHHHhcCCCcEEEEeeehhcccccCCCCEEEEEEE
Confidence 346799999999999999888899999986543 2346788999999998 699999999998643211 1236799999
Q ss_pred eccCCCCCCC-----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccC
Q 041479 604 FMHHGSLESC-----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMS 678 (771)
Q Consensus 604 ~~~~g~L~~~-----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 678 (771)
|+++|+|.++ ...+++..+..++.|++.|++|||+. +|+|||+||+||+++.++.++|+|||+++.......
T Consensus 100 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~nili~~~~~~~l~dfg~~~~~~~~~~ 176 (282)
T cd06636 100 FCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVG 176 (282)
T ss_pred eCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCcchhhhhcccc
Confidence 9999999765 23477888899999999999999985 899999999999999999999999999875432211
Q ss_pred Ccccccccccccccccchh--------------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhc
Q 041479 679 SNQCSSVGLKGTVGYATPE--------------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVL 738 (771)
Q Consensus 679 ~~~~~~~~~~gt~~y~aPE--------------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 738 (771)
......|++.|+||| +||++|||++|+.||.+...... .........+......+
T Consensus 177 ----~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~ 251 (282)
T cd06636 177 ----RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRA-LFLIPRNPPPKLKSKKW 251 (282)
T ss_pred ----CCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhh-hhhHhhCCCCCCccccc
Confidence 122346899999998 59999999999999965422111 11111111122222334
Q ss_pred CccccccCcccChhchhhcCCHHHHHH
Q 041479 739 DPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 739 ~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
++.+.....+||+.||.+|||+.|+++
T Consensus 252 ~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 252 SKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred CHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 556666777999999999999999875
No 304
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.96 E-value=9.8e-29 Score=257.35 Aligned_cols=227 Identities=22% Similarity=0.260 Sum_probs=180.3
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeeccc-hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEe
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEF 604 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~ 604 (771)
...+|+|.+|.||++.++.+++.||+|.+.... ....+++.+|++++++++||||+++++++.... ..++|+||
T Consensus 6 ~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-----~~~lv~e~ 80 (265)
T cd06605 6 LGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNG-----DISICMEY 80 (265)
T ss_pred HHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCC-----EEEEEEEe
Confidence 445899999999999999888899999997653 345578999999999999999999999988775 78999999
Q ss_pred ccCCCCCCCc----ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCc
Q 041479 605 MHHGSLESCP----RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSN 680 (771)
Q Consensus 605 ~~~g~L~~~~----~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 680 (771)
+++++|.++. ..+++.....++.|++.|++|+|+. .+++||||||+||++++++.+||+|||.+.........
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~--~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~- 157 (265)
T cd06605 81 MDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEK--HKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAK- 157 (265)
T ss_pred cCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCC--CCeecCCCCHHHEEECCCCCEEEeecccchhhHHHHhh-
Confidence 9999997762 5678888999999999999999982 38999999999999999999999999998755332211
Q ss_pred ccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHh---hCCCchh-hhcCcc
Q 041479 681 QCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKM---ALPDQIL-QVLDPL 741 (771)
Q Consensus 681 ~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~ 741 (771)
...|+..|+||| +|+++|++++|+.||...........+.... ..+.... ..+++.
T Consensus 158 -----~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (265)
T cd06605 158 -----TFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPPRLPSGKFSPD 232 (265)
T ss_pred -----cccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCCCCCChhhcCHH
Confidence 145888999999 6999999999999996542211222222222 1122222 225666
Q ss_pred ccccCcccChhchhhcCCHHHHHH
Q 041479 742 FLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 742 ~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
+.....+||..+|++|||+.+++.
T Consensus 233 ~~~li~~~l~~~p~~Rpt~~~ll~ 256 (265)
T cd06605 233 FQDFVNLCLIKDPRERPSYKELLE 256 (265)
T ss_pred HHHHHHHHcCCCchhCcCHHHHhh
Confidence 666777999999999999999985
No 305
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=3.4e-29 Score=258.67 Aligned_cols=226 Identities=18% Similarity=0.166 Sum_probs=183.7
Q ss_pred cccccccccccceEEEEEecCCCeEEEEEEeeccch--hhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEE
Q 041479 524 LLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQR--GALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALV 601 (771)
Q Consensus 524 ~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv 601 (771)
....++|.|-||+|-.|++--+|..||||+++...- .....+++|++-|+-++|||||+||++..+.. .+|+|
T Consensus 21 DLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQT-----KlyLi 95 (864)
T KOG4717|consen 21 DLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQT-----KLYLI 95 (864)
T ss_pred hhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccc-----eEEEE
Confidence 346789999999999999999999999999977653 34567899999999999999999999976665 78999
Q ss_pred EEeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeC-CCCceEEecccCccccCcc
Q 041479 602 YEFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD-NDMTAHMGDFGLTRFIPEV 676 (771)
Q Consensus 602 ~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~-~~~~~kl~DfGla~~~~~~ 676 (771)
+|.-++|+|.++ ...+.+.-..+++.||+.|+.|+|+. .+||||+||+||.+- .-|-+|++|||++-.+.+.
T Consensus 96 LELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG 172 (864)
T KOG4717|consen 96 LELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPG 172 (864)
T ss_pred EEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEeeecCceEeeeccccccCCCc
Confidence 999999999887 44688888999999999999999986 899999999999875 5689999999998755443
Q ss_pred cCCcccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCc
Q 041479 677 MSSNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDP 740 (771)
Q Consensus 677 ~~~~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 740 (771)
. ...+.||+..|-||| +||++|-++.|+.||......+ .+-.+..-. ..++..++.
T Consensus 173 ~-----kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSE-TLTmImDCK--YtvPshvS~ 244 (864)
T KOG4717|consen 173 K-----KLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSE-TLTMIMDCK--YTVPSHVSK 244 (864)
T ss_pred c-----hhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchh-hhhhhhccc--ccCchhhhH
Confidence 3 234568999999999 6999999999999998754433 233333222 233444444
Q ss_pred cccccCcccChhchhhcCCHHHHHH
Q 041479 741 LFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 741 ~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
+.+..+..|++.||.+|.+.+|++.
T Consensus 245 eCrdLI~sMLvRdPkkRAslEeI~s 269 (864)
T KOG4717|consen 245 ECRDLIQSMLVRDPKKRASLEEIVS 269 (864)
T ss_pred HHHHHHHHHHhcCchhhccHHHHhc
Confidence 5555566999999999999999873
No 306
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.96 E-value=1.2e-28 Score=271.61 Aligned_cols=174 Identities=24% Similarity=0.288 Sum_probs=143.9
Q ss_pred ccccccccccceEEEEEecC--CCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEE
Q 041479 525 LNVSYESLVKATVYKGILDL--DQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~--~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
....+|+|.+|+||++.... .++.||||.+... +.+.+|++++++++|||||++++++.... ..|+||
T Consensus 96 i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~-----~~~lv~ 165 (392)
T PHA03207 96 ILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKS-----TVCMVM 165 (392)
T ss_pred EEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCC-----EEEEEe
Confidence 34568999999999997643 4568999988533 34568999999999999999999987765 789999
Q ss_pred EeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCC
Q 041479 603 EFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSS 679 (771)
Q Consensus 603 e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 679 (771)
||+. ++|.++ ...+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.......
T Consensus 166 e~~~-~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~- 240 (392)
T PHA03207 166 PKYK-CDLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPD- 240 (392)
T ss_pred hhcC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEccCccccccCcccc-
Confidence 9996 566544 35689999999999999999999985 899999999999999999999999999976544322
Q ss_pred cccccccccccccccchh---------------HHHHHHHHHhCCCCCCc
Q 041479 680 NQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSD 714 (771)
Q Consensus 680 ~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~ 714 (771)
........||+.|+||| +||++|||++|+.||.+
T Consensus 241 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~ 289 (392)
T PHA03207 241 -TPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFG 289 (392)
T ss_pred -cccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 11223457999999999 69999999999999954
No 307
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.96 E-value=2.2e-29 Score=285.05 Aligned_cols=238 Identities=22% Similarity=0.262 Sum_probs=175.4
Q ss_pred ccccccccccccccceEEEEEecCCCeEEEEEEeeccc-hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCC------
Q 041479 521 KDLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQ------ 593 (771)
Q Consensus 521 ~~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~------ 593 (771)
.++..---+|.|+||.|||++.+-+|+.||||+|.... ........+|+.++++++|||||+++..|.+....
T Consensus 479 ~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~ei 558 (1351)
T KOG1035|consen 479 NDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLEI 558 (1351)
T ss_pred hhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccccccc
Confidence 34444556899999999999999999999999997663 34456789999999999999999999666432210
Q ss_pred --------------------------------------------------------------------------------
Q 041479 594 -------------------------------------------------------------------------------- 593 (771)
Q Consensus 594 -------------------------------------------------------------------------------- 593 (771)
T Consensus 559 ~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e~ 638 (1351)
T KOG1035|consen 559 VASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSEG 638 (1351)
T ss_pred cccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccCC
Confidence
Q ss_pred ----------------------------CceeEEEEEEeccCCCCCCC--cccC--CHHHHHHHHHHHHHHHHHHHhcCC
Q 041479 594 ----------------------------GNYFRALVYEFMHHGSLESC--PRIL--SFLRRLNIAIDVASALEYLHHHCK 641 (771)
Q Consensus 594 ----------------------------~~~~~~lv~e~~~~g~L~~~--~~~l--~~~~~~~i~~~ia~gL~~LH~~~~ 641 (771)
....+||-||||+...+.++ ...+ .....++++.+|++||.|+|++
T Consensus 639 ~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH~~-- 716 (1351)
T KOG1035|consen 639 SVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIHDQ-- 716 (1351)
T ss_pred ccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHhC--
Confidence 00246788888887666554 1122 3567899999999999999997
Q ss_pred CCeEecCCCCCCeeeCCCCceEEecccCccccCc--------------ccCCcccccccccccccccchh----------
Q 041479 642 KPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPE--------------VMSSNQCSSVGLKGTVGYATPE---------- 697 (771)
Q Consensus 642 ~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~--------------~~~~~~~~~~~~~gt~~y~aPE---------- 697 (771)
|||||||||.||++|++..+||+|||+|..... .........++.+||.-|+|||
T Consensus 717 -giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Y 795 (1351)
T KOG1035|consen 717 -GIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKY 795 (1351)
T ss_pred -ceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccc
Confidence 899999999999999999999999999986210 0111122345778999999999
Q ss_pred --------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCccccc---cCcccChhchhhcCCHHHHHH
Q 041479 698 --------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFLV---GGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 698 --------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
+|||++||+. ||.........+.....+.+|.. ....++.... ....+++.||++|||+.|++.
T Consensus 796 n~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~LR~g~iP~~-~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 796 NSKIDMYSLGIVLFEMLY---PFGTSMERASILTNLRKGSIPEP-ADFFDPEHPEEASLIRWLLSHDPSKRPTATELLN 870 (1351)
T ss_pred cchhhhHHHHHHHHHHhc---cCCchHHHHHHHHhcccCCCCCC-cccccccchHHHHHHHHHhcCCCccCCCHHHHhh
Confidence 5999999996 55432122223444445555544 4445555432 344788899999999999985
No 308
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.96 E-value=8.4e-29 Score=260.76 Aligned_cols=225 Identities=22% Similarity=0.282 Sum_probs=170.6
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEe
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEF 604 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~ 604 (771)
..+|+|.+|.||+|+.+.+++.||||++.... ....+.+.+|++++++++||||+++++++.+.+ ..++||||
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-----~~~~v~e~ 80 (284)
T cd07860 6 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTEN-----KLYLVFEF 80 (284)
T ss_pred eeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCC-----cEEEEeec
Confidence 45789999999999999888899999986443 233467899999999999999999999987665 67999999
Q ss_pred ccCCCCCCC-----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCC
Q 041479 605 MHHGSLESC-----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSS 679 (771)
Q Consensus 605 ~~~g~L~~~-----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 679 (771)
+. ++|..+ ...+++..+..++.|++.|++|||+. +++||||+|+||+++.++.+|++|||+++.......
T Consensus 81 ~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~- 155 (284)
T cd07860 81 LH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR- 155 (284)
T ss_pred cc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEeeccchhhcccCcc-
Confidence 96 566543 24578899999999999999999985 899999999999999999999999999875543221
Q ss_pred cccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHh---------------
Q 041479 680 NQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKM--------------- 728 (771)
Q Consensus 680 ~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~--------------- 728 (771)
......+++.|+||| |||++||++||+.||.+..... ...+....
T Consensus 156 ---~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 231 (284)
T cd07860 156 ---TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID-QLFRIFRTLGTPDEVVWPGVTSL 231 (284)
T ss_pred ---ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHHHhCCCChhhhhhhhHH
Confidence 112234688899999 6999999999999985421110 11111110
Q ss_pred -----hCCC-------chhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 729 -----ALPD-------QILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 729 -----~~~~-------~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
.++. .....+++.+.....+|++.||++|||+.++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 232 PDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred HHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 0000 011123344444566999999999999999975
No 309
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.96 E-value=1.1e-28 Score=266.40 Aligned_cols=235 Identities=20% Similarity=0.199 Sum_probs=176.3
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeecc-chhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEe
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLH-QRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEF 604 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~ 604 (771)
...+|+|.+|+||+|++..+++.||||++... ......++.+|+.++++++||||+++++++...+.......|+||||
T Consensus 10 ~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e~ 89 (336)
T cd07849 10 LSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDVYIVQEL 89 (336)
T ss_pred EEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceEEEEehh
Confidence 44589999999999999988889999998643 23345678899999999999999999999876654444467999999
Q ss_pred ccCCCCCCC--cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCccc
Q 041479 605 MHHGSLESC--PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQC 682 (771)
Q Consensus 605 ~~~g~L~~~--~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 682 (771)
+++ ++.+. .+.+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++........ ..
T Consensus 90 ~~~-~l~~~~~~~~l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~-~~ 164 (336)
T cd07849 90 MET-DLYKLIKTQHLSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDH-TG 164 (336)
T ss_pred ccc-CHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEECcccceeeccccccc-cC
Confidence 974 66544 34688999999999999999999986 8999999999999999999999999999865432211 11
Q ss_pred ccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHH-------------------
Q 041479 683 SSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVK------------------- 727 (771)
Q Consensus 683 ~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~------------------- 727 (771)
......||+.|+||| +||++|||++|+.||.+..... .+..+..
T Consensus 165 ~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (336)
T cd07849 165 FLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLH-QLNLILGVLGTPSQEDLNCIISLRAR 243 (336)
T ss_pred CcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHcCCCCHHHHHHhhchhhh
Confidence 223356899999999 6999999999999996421100 0000000
Q ss_pred ---hhCCC----c---hhhhcCccccccCcccChhchhhcCCHHHHHHH
Q 041479 728 ---MALPD----Q---ILQVLDPLFLVGGVQEGEETAEENIKKGQIRES 766 (771)
Q Consensus 728 ---~~~~~----~---~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~ 766 (771)
...+. . .....++.+...+.+||+.||++|||+.|+++.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 244 NYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred hHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00000 0 011224444456679999999999999999863
No 310
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.96 E-value=8.9e-30 Score=247.61 Aligned_cols=225 Identities=20% Similarity=0.228 Sum_probs=179.8
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccC-CCCceeEEEEeecCCCCCceeEEEEEEec
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIR-HRNLVKIITACSTSDFQGNYFRALVYEFM 605 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~~~~~~lv~e~~ 605 (771)
..+|-|..|.|..+.++.+++.+|+|++... ...++|++..-+.. |||||.++++|... +++.....+|||.|
T Consensus 68 qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs-~~~rkcLLiVmE~m 141 (400)
T KOG0604|consen 68 QVLGAGINGKVVQCVHKRTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENS-YQGRKCLLIVMECM 141 (400)
T ss_pred hhhccccCCceEEEEeccchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhh-ccCceeeEeeeecc
Confidence 5689999999999999999999999998533 45678999887774 99999999998765 56666889999999
Q ss_pred cCCCCCCC-----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCC---CCceEEecccCccccCccc
Q 041479 606 HHGSLESC-----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN---DMTAHMGDFGLTRFIPEVM 677 (771)
Q Consensus 606 ~~g~L~~~-----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~---~~~~kl~DfGla~~~~~~~ 677 (771)
+||+|.+. ...+++.++..|+.||+.|+.|||+. .|.||||||+|+|... +..+|++|||+|+.-..
T Consensus 142 eGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~-- 216 (400)
T KOG0604|consen 142 EGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQE-- 216 (400)
T ss_pred cchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhc---chhhccCChhheeeecCCCCcceEecccccccccCC--
Confidence 99999765 34588999999999999999999996 9999999999999964 56799999999985432
Q ss_pred CCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCc--c-HHHHHHhh--CCCchhhh
Q 041479 678 SSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGL--D-LHNFVKMA--LPDQILQV 737 (771)
Q Consensus 678 ~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~--~-~~~~~~~~--~~~~~~~~ 737 (771)
.....+.|-||+|.||| +||++|-|+.|.+||--.....+ . -..+..+. +|.+.++.
T Consensus 217 ---~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs~ 293 (400)
T KOG0604|consen 217 ---PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWSC 293 (400)
T ss_pred ---CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCChhHhH
Confidence 12234567899999999 69999999999999953322111 1 22333333 35666677
Q ss_pred cCccccccCcccChhchhhcCCHHHHHH
Q 041479 738 LDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 738 ~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
++...++++...+..+|++|.|+.++++
T Consensus 294 VSe~aKdlIR~LLkt~PteRlTI~~~m~ 321 (400)
T KOG0604|consen 294 VSEAAKDLIRKLLKTEPTERLTIEEVMD 321 (400)
T ss_pred HHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence 7766666666778899999999999874
No 311
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.96 E-value=2.4e-28 Score=254.08 Aligned_cols=229 Identities=23% Similarity=0.275 Sum_probs=182.4
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeeccch-hhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEe
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLHQR-GALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEF 604 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~ 604 (771)
...+|+|.+|.||+|+...+++.||||++..... ...+.+.+|++++.+++||||+++++++...+ ..++||||
T Consensus 6 ~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-----~~~lv~e~ 80 (264)
T cd06623 6 VKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEG-----EISIVLEY 80 (264)
T ss_pred eeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCC-----eEEEEEEe
Confidence 3457899999999999999888999999976543 45678999999999999999999999988776 78999999
Q ss_pred ccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHh-cCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCc
Q 041479 605 MHHGSLESC---PRILSFLRRLNIAIDVASALEYLHH-HCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSN 680 (771)
Q Consensus 605 ~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~-~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 680 (771)
+++++|.++ ...+++..+..++.|+++|++|+|+ . +++||||+|+||+++.++.++++|||.+.........
T Consensus 81 ~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~- 156 (264)
T cd06623 81 MDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQ- 156 (264)
T ss_pred cCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEEECCCCCEEEccCccceecccCCCc-
Confidence 999999876 3568899999999999999999998 6 8999999999999999999999999999866433221
Q ss_pred ccccccccccccccchh---------------HHHHHHHHHhCCCCCCcccc-CCccHHHHHHhhCCCchhhh-cCcccc
Q 041479 681 QCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFT-EGLDLHNFVKMALPDQILQV-LDPLFL 743 (771)
Q Consensus 681 ~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~ 743 (771)
.....++..|+||| ||+++||+++|+.||..... ......+............. ++..+.
T Consensus 157 ---~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 233 (264)
T cd06623 157 ---CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPPPSLPAEEFSPEFR 233 (264)
T ss_pred ---ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcCCCCCCCcccCCHHHH
Confidence 11345788999999 69999999999999965421 11112222222222222222 455566
Q ss_pred ccCcccChhchhhcCCHHHHHHH
Q 041479 744 VGGVQEGEETAEENIKKGQIRES 766 (771)
Q Consensus 744 ~~~~~cl~~~p~~Rpt~~~vl~~ 766 (771)
....+|+..+|++|||+.++++.
T Consensus 234 ~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 234 DFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred HHHHHHccCChhhCCCHHHHHhC
Confidence 66779999999999999999863
No 312
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.96 E-value=9.3e-29 Score=257.18 Aligned_cols=230 Identities=21% Similarity=0.216 Sum_probs=175.2
Q ss_pred ccccccceEEEEEecCCCeEEEEEEeeccch---hhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEec
Q 041479 529 YESLVKATVYKGILDLDQTFIAVKVLFLHQR---GALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFM 605 (771)
Q Consensus 529 l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~~ 605 (771)
+|.|.+|+||++++..+++.||+|++..... ...+.+.+|++++++++||||+++++.+.+.. ..|+||||+
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-----~~~lv~e~~ 75 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKK-----NLYLVMEYL 75 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCc-----EEEEEEecC
Confidence 4789999999999998888999999965432 45678999999999999999999999887665 789999999
Q ss_pred cCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCC---
Q 041479 606 HHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSS--- 679 (771)
Q Consensus 606 ~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~--- 679 (771)
++++|.++ ...+++..+..++.|+++||+|||+. +++||||+|+||+++.++.+|++|||++.........
T Consensus 76 ~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~ 152 (265)
T cd05579 76 PGGDLASLLENVGSLDEDVARIYIAEIVLALEYLHSN---GIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLN 152 (265)
T ss_pred CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHc---CeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccc
Confidence 99999765 24678999999999999999999985 8999999999999999999999999998754322110
Q ss_pred -cccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCcccc
Q 041479 680 -NQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFL 743 (771)
Q Consensus 680 -~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 743 (771)
.........++..|+||| +|+++||+++|+.||....... ..........+......++..+.
T Consensus 153 ~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 231 (265)
T cd05579 153 DDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEE-IFQNILNGKIEWPEDVEVSDEAI 231 (265)
T ss_pred cccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHhcCCcCCCccccCCHHHH
Confidence 001122345788999999 6999999999999996532211 12222222222111111255555
Q ss_pred ccCcccChhchhhcCCHHHHHHHH
Q 041479 744 VGGVQEGEETAEENIKKGQIRESL 767 (771)
Q Consensus 744 ~~~~~cl~~~p~~Rpt~~~vl~~L 767 (771)
....+|++.+|++|||+.++.+.|
T Consensus 232 ~~i~~~l~~~p~~Rpt~~~~~~~l 255 (265)
T cd05579 232 DLISKLLVPDPEKRLGAKSIEEIK 255 (265)
T ss_pred HHHHHHhcCCHhhcCCCccHHHHh
Confidence 667799999999999995554444
No 313
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.96 E-value=8.8e-29 Score=260.60 Aligned_cols=226 Identities=20% Similarity=0.258 Sum_probs=169.5
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEe
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEF 604 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~ 604 (771)
..+|+|.+|+||+|+++.+++.||+|++.... ......+.+|++++++++||||+++++++.+.. ..++|+||
T Consensus 6 ~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~-----~~~lv~e~ 80 (284)
T cd07839 6 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDK-----KLTLVFEY 80 (284)
T ss_pred EEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCC-----ceEEEEec
Confidence 34789999999999999888899999996542 233467888999999999999999999987665 68999999
Q ss_pred ccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCc
Q 041479 605 MHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSN 680 (771)
Q Consensus 605 ~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 680 (771)
+++ ++.+. ...+++..+..++.|+++||.|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 81 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~-- 154 (284)
T cd07839 81 CDQ-DLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVR-- 154 (284)
T ss_pred CCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEcCCCcEEECccchhhccCCCCC--
Confidence 975 65443 34588999999999999999999985 899999999999999999999999999986543221
Q ss_pred ccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhh-------------CC
Q 041479 681 QCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMA-------------LP 731 (771)
Q Consensus 681 ~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~-------------~~ 731 (771)
......+++.|+||| +||++|||+||..|+.........+....... .+
T Consensus 155 --~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (284)
T cd07839 155 --CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLP 232 (284)
T ss_pred --CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcc
Confidence 112345788999999 69999999999988643211111111110000 00
Q ss_pred C--------------chhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 732 D--------------QILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 732 ~--------------~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
. .....+++.+.....+||+.||++|||+.++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 233 DYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred cccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 0 000112333334556999999999999999975
No 314
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.96 E-value=2.8e-28 Score=255.89 Aligned_cols=223 Identities=24% Similarity=0.269 Sum_probs=174.5
Q ss_pred ccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEec
Q 041479 529 YESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFM 605 (771)
Q Consensus 529 l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~~ 605 (771)
+|+|.+|+||++....+++.||+|.+.... ....+.+..|++++++++||||+++++++...+ ..|+||||+
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-----~~~lv~e~~ 75 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKD-----DLCLVMTLM 75 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCC-----eEEEEEecC
Confidence 478999999999999888999999996432 233456788999999999999999999987765 689999999
Q ss_pred cCCCCCCC-----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCc
Q 041479 606 HHGSLESC-----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSN 680 (771)
Q Consensus 606 ~~g~L~~~-----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 680 (771)
++++|.++ ...+++.++..++.|++.|+.|||+. +++||||+|+||+++.++.+|++|||.+.......
T Consensus 76 ~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~--- 149 (277)
T cd05577 76 NGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGK--- 149 (277)
T ss_pred CCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEccCcchhhhccCC---
Confidence 99999765 12588899999999999999999985 99999999999999999999999999987654311
Q ss_pred ccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHh--hCCCchhhhcCcccc
Q 041479 681 QCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKM--ALPDQILQVLDPLFL 743 (771)
Q Consensus 681 ~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 743 (771)
......|+..|+||| +||++||+++|+.||...... ....+.... ..+...+..+++.+.
T Consensus 150 --~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (277)
T cd05577 150 --KIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEK-VEKEELKRRTLEMAVEYPDKFSPEAK 226 (277)
T ss_pred --ccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCccc-ccHHHHHhccccccccCCccCCHHHH
Confidence 112235788999999 699999999999999653211 111122111 112233444566666
Q ss_pred ccCcccChhchhhcC-----CHHHHHH
Q 041479 744 VGGVQEGEETAEENI-----KKGQIRE 765 (771)
Q Consensus 744 ~~~~~cl~~~p~~Rp-----t~~~vl~ 765 (771)
....+||+.||++|| ++.++++
T Consensus 227 ~li~~~l~~~p~~R~~~~~~~~~~ll~ 253 (277)
T cd05577 227 DLCEALLQKDPEKRLGCRGGSADEVRE 253 (277)
T ss_pred HHHHHHccCChhHccCCCcccHHHHHh
Confidence 677799999999999 6666653
No 315
>PTZ00284 protein kinase; Provisional
Probab=99.96 E-value=1.6e-28 Score=276.85 Aligned_cols=175 Identities=21% Similarity=0.233 Sum_probs=139.3
Q ss_pred ccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCC------CCceeEEEEeecCCCCCceeE
Q 041479 525 LNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRH------RNLVKIITACSTSDFQGNYFR 598 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H------~nIv~l~~~~~~~~~~~~~~~ 598 (771)
....+|+|.+|+||+|++..+++.||||+++... ....++..|+++++.++| ++|+++++++.... ...
T Consensus 133 i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~~~----~~~ 207 (467)
T PTZ00284 133 ILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQNET----GHM 207 (467)
T ss_pred EEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEcCC----ceE
Confidence 3446899999999999999888899999996432 233456677777777754 45889999886543 167
Q ss_pred EEEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCC---------------
Q 041479 599 ALVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDM--------------- 660 (771)
Q Consensus 599 ~lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~--------------- 660 (771)
|+|||++ +++|.++ ...+++..+..|+.|++.||+|||+. .+||||||||+|||++.++
T Consensus 208 ~iv~~~~-g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~--~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~ 284 (467)
T PTZ00284 208 CIVMPKY-GPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTE--LHLMHTDLKPENILMETSDTVVDPVTNRALPPDP 284 (467)
T ss_pred EEEEecc-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhc--CCeecCCCCHHHEEEecCCcccccccccccCCCC
Confidence 9999998 5666554 34688999999999999999999973 3899999999999998765
Q ss_pred -ceEEecccCccccCcccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCc
Q 041479 661 -TAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSD 714 (771)
Q Consensus 661 -~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~ 714 (771)
.+||+|||.+..... .....+||+.||||| +||++|||++|+.||..
T Consensus 285 ~~vkl~DfG~~~~~~~-------~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~ 347 (467)
T PTZ00284 285 CRVRICDLGGCCDERH-------SRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDT 347 (467)
T ss_pred ceEEECCCCccccCcc-------ccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 499999998763221 122457999999999 69999999999999964
No 316
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.96 E-value=1.2e-28 Score=267.94 Aligned_cols=169 Identities=21% Similarity=0.329 Sum_probs=140.5
Q ss_pred cccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEE
Q 041479 524 LLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYE 603 (771)
Q Consensus 524 ~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e 603 (771)
.....+|+|.+|+||+|+...+++.||+|+.... ....|+.++++++|||||++++++.+.. ..++|||
T Consensus 69 ~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~~lv~e 137 (357)
T PHA03209 69 TVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGA-----ITCMVLP 137 (357)
T ss_pred EEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCC-----eeEEEEE
Confidence 3445689999999999999988889999975322 2356999999999999999999998776 6799999
Q ss_pred eccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCC
Q 041479 604 FMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSS 679 (771)
Q Consensus 604 ~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 679 (771)
|+. |+|.++ ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 138 ~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~-- 211 (357)
T PHA03209 138 HYS-SDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAP-- 211 (357)
T ss_pred ccC-CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEecCccccccccCc--
Confidence 995 566554 34688999999999999999999985 89999999999999999999999999997532211
Q ss_pred cccccccccccccccchh---------------HHHHHHHHHhCCCCC
Q 041479 680 NQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPT 712 (771)
Q Consensus 680 ~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~ 712 (771)
...+..||+.|+||| |||++|||+++..|+
T Consensus 212 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 212 ---AFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred ---ccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 122456899999999 799999999955544
No 317
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.96 E-value=1.7e-28 Score=259.07 Aligned_cols=227 Identities=24% Similarity=0.222 Sum_probs=172.6
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeeccc-hhhHHHHHHHHHHHhccC-CCCceeEEEEeecCCCCCceeEEEEEE
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ-RGALKSFMAECQALRNIR-HRNLVKIITACSTSDFQGNYFRALVYE 603 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~~~~~~lv~e 603 (771)
...+|+|.+|+||++++..+++.||||.+.... ......+.+|+.++.++. ||||+++++++.... ..+++||
T Consensus 9 ~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~-----~~~~~~e 83 (288)
T cd06616 9 LGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREG-----DCWICME 83 (288)
T ss_pred HHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCC-----cEEEEEe
Confidence 346899999999999999999999999986543 344568899999999996 999999999987765 5789999
Q ss_pred eccCCCCCCC--------cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCc
Q 041479 604 FMHHGSLESC--------PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPE 675 (771)
Q Consensus 604 ~~~~g~L~~~--------~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~ 675 (771)
|+.. ++.++ ...+++..+..++.+++.||+|||+. .+|+||||||+||+++.++.+||+|||+++....
T Consensus 84 ~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~--~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~ 160 (288)
T cd06616 84 LMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEE--LKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVD 160 (288)
T ss_pred cccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhc--CCeeccCCCHHHEEEccCCcEEEeecchhHHhcc
Confidence 9864 44322 24588889999999999999999974 3899999999999999999999999999975543
Q ss_pred ccCCcccccccccccccccchh------------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCC---Cch
Q 041479 676 VMSSNQCSSVGLKGTVGYATPE------------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALP---DQI 734 (771)
Q Consensus 676 ~~~~~~~~~~~~~gt~~y~aPE------------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~---~~~ 734 (771)
... .....|++.|+||| +||++||+++|+.||.........+.+......+ ...
T Consensus 161 ~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (288)
T cd06616 161 SIA-----KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKGDPPILSNSE 235 (288)
T ss_pred CCc-----cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcCCCCCcCCCcC
Confidence 221 12235788999999 6999999999999996532100111111111111 111
Q ss_pred hhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 735 LQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 735 ~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
...++..+.....+||+++|++|||+.+|++
T Consensus 236 ~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~ 266 (288)
T cd06616 236 EREFSPSFVNFINLCLIKDESKRPKYKELLE 266 (288)
T ss_pred CCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 1224455556677999999999999999985
No 318
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.96 E-value=8.6e-31 Score=250.65 Aligned_cols=230 Identities=22% Similarity=0.182 Sum_probs=176.1
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccc-hhhHHHHHHHHHHHhcc-CCCCceeEEEEeecCCCCCceeEEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ-RGALKSFMAECQALRNI-RHRNLVKIITACSTSDFQGNYFRAL 600 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~~~~l 600 (771)
......+|.|.||+|+|..++..++..|||+++... +...++++.|.++..+- +.||||+++|+++.++ -.||
T Consensus 66 Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EG-----dcWi 140 (361)
T KOG1006|consen 66 LQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEG-----DCWI 140 (361)
T ss_pred HHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCC-----ceee
Confidence 344567899999999999999999999999997664 46678999999876665 6999999999988766 5799
Q ss_pred EEEeccCCCCCCC--------cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccc
Q 041479 601 VYEFMHHGSLESC--------PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRF 672 (771)
Q Consensus 601 v~e~~~~g~L~~~--------~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~ 672 (771)
.||.|+ -+++.+ ...+++.-.-+|..-...||.||-.. ..|+|||+||+|||++..|.+|+||||++..
T Consensus 141 CMELMd-~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~--lkiIHRDvKPSNILldr~G~vKLCDFGIcGq 217 (361)
T KOG1006|consen 141 CMELMD-ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEE--LKIIHRDVKPSNILLDRHGDVKLCDFGICGQ 217 (361)
T ss_pred eHHHHh-hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHH--hhhhhccCChhheEEecCCCEeeecccchHh
Confidence 999995 366543 33567766777777788999999986 5899999999999999999999999999986
Q ss_pred cCcccCCcccccccccccccccchh-----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchh
Q 041479 673 IPEVMSSNQCSSVGLKGTVGYATPE-----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQIL 735 (771)
Q Consensus 673 ~~~~~~~~~~~~~~~~gt~~y~aPE-----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~ 735 (771)
+.... +.+..+|...||||| +|+++||++||+.||....+--..+.+.+.+..|.-..
T Consensus 218 Lv~Si-----AkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdpp~l~~ 292 (361)
T KOG1006|consen 218 LVDSI-----AKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDPPILLF 292 (361)
T ss_pred HHHHH-----HhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCCCeecC
Confidence 64432 223346889999999 79999999999999975222112244445555542111
Q ss_pred ----hhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 736 ----QVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 736 ----~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
-.....+......|+.+|-+.||+..++..
T Consensus 293 ~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~ 326 (361)
T KOG1006|consen 293 DKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKK 326 (361)
T ss_pred cccccccCHHHHHHHHHHhhcccccCcchhhhhc
Confidence 112233334455999999999999888753
No 319
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.96 E-value=2.5e-28 Score=257.38 Aligned_cols=226 Identities=21% Similarity=0.240 Sum_probs=173.6
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEe
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEF 604 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~ 604 (771)
..+|+|.+|.||+|++..+++.||||++.... ....+.+.+|+.++++++||||+++++++.... ..++||||
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-----~~~~v~e~ 80 (286)
T cd07832 6 GRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGS-----GFVLVMEY 80 (286)
T ss_pred eecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCC-----eeEEEecc
Confidence 35799999999999998888899999997554 344578999999999999999999999988765 78999999
Q ss_pred ccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCc
Q 041479 605 MHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSN 680 (771)
Q Consensus 605 ~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 680 (771)
+ +++|.++ ...+++.++..++.|+++||+|||+. +++|+||||+||+++.++.++++|||++........
T Consensus 81 ~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~-- 154 (286)
T cd07832 81 M-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLLISADGVLKIADFGLARLFSEEEP-- 154 (286)
T ss_pred c-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC--
Confidence 9 9999765 34588999999999999999999985 899999999999999999999999999986543321
Q ss_pred ccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHH-----------------
Q 041479 681 QCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVK----------------- 727 (771)
Q Consensus 681 ~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~----------------- 727 (771)
.......|+..|+||| +|+++||+++|+.||...... ..+.....
T Consensus 155 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (286)
T cd07832 155 -RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDI-EQLAIVFRTLGTPNEETWPGLTSLP 232 (286)
T ss_pred -CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHH-HHHHHHHHHcCCCChHHHhhccCcc
Confidence 1122346899999999 699999999998777532110 00111000
Q ss_pred ----hhCCCc-------hhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 728 ----MALPDQ-------ILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 728 ----~~~~~~-------~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
...+.. .....+..+.....+|+..+|++|||++++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~ 281 (286)
T cd07832 233 DYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALR 281 (286)
T ss_pred hhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 001100 00112333334556999999999999999986
No 320
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=99.96 E-value=2.2e-28 Score=259.53 Aligned_cols=225 Identities=24% Similarity=0.259 Sum_probs=170.5
Q ss_pred cccccccceEEEEEecCCCeEEEEEEeeccch-----hhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEE
Q 041479 528 SYESLVKATVYKGILDLDQTFIAVKVLFLHQR-----GALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 528 ~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~-----~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
.+|+|.+|.||+|....+++.||||.+..... .....+..|++++++++|+||+++++++.+.+ ..++||
T Consensus 7 ~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~-----~~~lv~ 81 (298)
T cd07841 7 KLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKS-----NINLVF 81 (298)
T ss_pred eeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCC-----EEEEEE
Confidence 47999999999999988888999999965432 23456788999999999999999999998765 789999
Q ss_pred EeccCCCCCCC---cc-cCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccC
Q 041479 603 EFMHHGSLESC---PR-ILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMS 678 (771)
Q Consensus 603 e~~~~g~L~~~---~~-~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 678 (771)
||+ +|+|.++ .. .+++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 82 e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~ 157 (298)
T cd07841 82 EFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNR 157 (298)
T ss_pred ccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEcCCCCEEEccceeeeeccCCCc
Confidence 999 8898766 22 588999999999999999999985 899999999999999999999999999986543221
Q ss_pred Ccccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhh-CC----------
Q 041479 679 SNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMA-LP---------- 731 (771)
Q Consensus 679 ~~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~-~~---------- 731 (771)
......+++.|+||| +||++||+++|..||.+..... .+....... .+
T Consensus 158 ----~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 232 (298)
T cd07841 158 ----KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDID-QLGKIFEALGTPTEENWPGVTS 232 (298)
T ss_pred ----cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHH-HHHHHHHHcCCCchhhhhhccc
Confidence 111234678899999 6999999999977775422111 111111100 00
Q ss_pred ------------Cc---hhhhcCccccccCcccChhchhhcCCHHHHHHH
Q 041479 732 ------------DQ---ILQVLDPLFLVGGVQEGEETAEENIKKGQIRES 766 (771)
Q Consensus 732 ------------~~---~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~ 766 (771)
.. .....+..+.....+||.+||++|||+.|+++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 233 LPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred ccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 00 001112222334569999999999999999863
No 321
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.96 E-value=1.5e-28 Score=254.99 Aligned_cols=225 Identities=20% Similarity=0.238 Sum_probs=178.1
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEE
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
...+|.|.+|.||+|++..+++.||+|.+.... ....+.+.+|++++++++||||+++++++.+.+ ..++||
T Consensus 5 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~lv~ 79 (258)
T cd05578 5 LRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEE-----NMYLVV 79 (258)
T ss_pred EEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCC-----eEEEEE
Confidence 345789999999999999888899999996543 245678999999999999999999999887665 789999
Q ss_pred EeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCC
Q 041479 603 EFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSS 679 (771)
Q Consensus 603 e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 679 (771)
||+.+++|... ...+++.++..++.|+++||.|||+. +++|+||||+||++++++.++++|||.+.......
T Consensus 80 e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~-- 154 (258)
T cd05578 80 DLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT-- 154 (258)
T ss_pred eCCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEEcCCCCEEEeecccccccCCCc--
Confidence 99999999766 23688899999999999999999986 89999999999999999999999999987654322
Q ss_pred cccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCc-cHHHHHHhhCCCchhhhcCcccc
Q 041479 680 NQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGL-DLHNFVKMALPDQILQVLDPLFL 743 (771)
Q Consensus 680 ~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 743 (771)
......|+..|+||| +|+++|++++|+.||........ .+.+.... .....+..++..+.
T Consensus 155 ---~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 230 (258)
T cd05578 155 ---LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQET-ADVLYPATWSTEAI 230 (258)
T ss_pred ---cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhcc-ccccCcccCcHHHH
Confidence 112345888999999 69999999999999975422111 11111111 22333344455555
Q ss_pred ccCcccChhchhhcCCH--HHHH
Q 041479 744 VGGVQEGEETAEENIKK--GQIR 764 (771)
Q Consensus 744 ~~~~~cl~~~p~~Rpt~--~~vl 764 (771)
....+||..||.+||++ .|++
T Consensus 231 ~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 231 DAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred HHHHHHccCChhHcCCccHHHHh
Confidence 66779999999999999 6654
No 322
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.95 E-value=4.1e-28 Score=255.82 Aligned_cols=227 Identities=21% Similarity=0.259 Sum_probs=180.7
Q ss_pred ccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEe
Q 041479 525 LNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEF 604 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~ 604 (771)
....+++|.+|.||+|.++.+++.||+|++..... ..+.+.+|++++++++|+||+++++++...+ ..|+|+||
T Consensus 23 ~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-----~~~lv~e~ 96 (286)
T cd06614 23 NLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGD-----ELWVVMEY 96 (286)
T ss_pred HhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECC-----EEEEEEec
Confidence 34568999999999999998788999999976544 5678899999999999999999999988776 78999999
Q ss_pred ccCCCCCCC---cc-cCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCc
Q 041479 605 MHHGSLESC---PR-ILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSN 680 (771)
Q Consensus 605 ~~~g~L~~~---~~-~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 680 (771)
+++++|.++ .. .+++.++..++.|++.||+|||+. +|+|+|+||+||+++.++.+||+|||++........
T Consensus 97 ~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~-- 171 (286)
T cd06614 97 MDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKS-- 171 (286)
T ss_pred cCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCChhhEEEcCCCCEEECccchhhhhccchh--
Confidence 999999877 22 689999999999999999999985 999999999999999999999999999875433221
Q ss_pred ccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCC-chhhhcCccccc
Q 041479 681 QCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPD-QILQVLDPLFLV 744 (771)
Q Consensus 681 ~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 744 (771)
......|+..|+||| +||++||+++|+.||.+.... .....+.....+. .....++..+..
T Consensus 172 --~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~ 248 (286)
T cd06614 172 --KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPL-RALFLITTKGIPPLKNPEKWSPEFKD 248 (286)
T ss_pred --hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhcCCCCCcchhhCCHHHHH
Confidence 112235788999999 699999999999998653211 1122222222221 122225566666
Q ss_pred cCcccChhchhhcCCHHHHHH
Q 041479 745 GGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 745 ~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
...+|++.+|++|||+.++++
T Consensus 249 li~~~l~~~p~~Rpt~~~il~ 269 (286)
T cd06614 249 FLNKCLVKDPEKRPSAEELLQ 269 (286)
T ss_pred HHHHHhccChhhCcCHHHHhh
Confidence 777999999999999999985
No 323
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=99.95 E-value=3.6e-28 Score=256.93 Aligned_cols=178 Identities=26% Similarity=0.349 Sum_probs=147.1
Q ss_pred ccccccccccceEEEEEecCCCeEEEEEEeeccch-hhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEE
Q 041479 525 LNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQR-GALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYE 603 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e 603 (771)
....+|+|.+|+||+|..+.+++.||||.+..... .....+.+|++++++++||||+++++++.+.+ ..++|||
T Consensus 9 ~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-----~~~lv~e 83 (291)
T cd07844 9 KLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKK-----TLTLVFE 83 (291)
T ss_pred EEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCC-----eEEEEEe
Confidence 44568999999999999998888999999965432 22356778999999999999999999988766 7899999
Q ss_pred eccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCC
Q 041479 604 FMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSS 679 (771)
Q Consensus 604 ~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 679 (771)
|+++ +|.++ ...+++.....++.|+++||.|||+. +|+||||||+||+++.++.+|++|||+++......
T Consensus 84 ~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~-- 157 (291)
T cd07844 84 YLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLLISERGELKLADFGLARAKSVPS-- 157 (291)
T ss_pred cCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEEEcCCCCEEECccccccccCCCC--
Confidence 9974 77654 33578889999999999999999985 89999999999999999999999999987542211
Q ss_pred cccccccccccccccchh----------------HHHHHHHHHhCCCCCCcc
Q 041479 680 NQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDM 715 (771)
Q Consensus 680 ~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~ 715 (771)
.......++..|+||| +||++|||++|+.||.+.
T Consensus 158 --~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~ 207 (291)
T cd07844 158 --KTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGS 207 (291)
T ss_pred --ccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 1112234688899999 699999999999999653
No 324
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=7.9e-29 Score=242.95 Aligned_cols=226 Identities=23% Similarity=0.264 Sum_probs=174.5
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeecc---chhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLH---QRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRA 599 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 599 (771)
+.....+|.|.||.|-.++-+.+++.||+|+++.. .++.+..-+.|-++++..+||.+..+...+.+.+ ..|
T Consensus 170 FdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~d-----rlC 244 (516)
T KOG0690|consen 170 FDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQD-----RLC 244 (516)
T ss_pred hhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCc-----eEE
Confidence 33445689999999999999999999999999755 3455667788999999999999999887766555 899
Q ss_pred EEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcc
Q 041479 600 LVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676 (771)
Q Consensus 600 lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~ 676 (771)
+||||+.||.|.-+ .+.+++.+...+..+|..||.|||+. +||.||+|.+|.|+|.+|++||+|||+++.--.
T Consensus 245 FVMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~---~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~- 320 (516)
T KOG0690|consen 245 FVMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSR---NIVYRDLKLENLLLDKDGHIKITDFGLCKEEIK- 320 (516)
T ss_pred EEEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhC---CeeeeechhhhheeccCCceEeeecccchhccc-
Confidence 99999999999765 45688888899999999999999995 999999999999999999999999999983221
Q ss_pred cCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHH-HhhCCCchhhhcCc
Q 041479 677 MSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFV-KMALPDQILQVLDP 740 (771)
Q Consensus 677 ~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 740 (771)
......++||||.|.||| .||++|||+.|+.||... +...+.+.. ...+ +.+..+++
T Consensus 321 ---~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~--dh~kLFeLIl~ed~--kFPr~ls~ 393 (516)
T KOG0690|consen 321 ---YGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNK--DHEKLFELILMEDL--KFPRTLSP 393 (516)
T ss_pred ---ccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCccccc--chhHHHHHHHhhhc--cCCccCCH
Confidence 122344689999999999 599999999999999642 111222221 1111 22233333
Q ss_pred cccccCcccChhchhhcC-----CHHHHH
Q 041479 741 LFLVGGVQEGEETAEENI-----KKGQIR 764 (771)
Q Consensus 741 ~~~~~~~~cl~~~p~~Rp-----t~~~vl 764 (771)
+-+......+.+||.+|. ++.||.
T Consensus 394 eAktLLsGLL~kdP~kRLGgGpdDakEi~ 422 (516)
T KOG0690|consen 394 EAKTLLSGLLKKDPKKRLGGGPDDAKEIM 422 (516)
T ss_pred HHHHHHHHHhhcChHhhcCCCchhHHHHH
Confidence 333333466789999996 455554
No 325
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.95 E-value=4.4e-28 Score=258.39 Aligned_cols=223 Identities=19% Similarity=0.217 Sum_probs=177.1
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeecc---chhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEE
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLH---QRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
...+|+|.+|+||+|+...+++.||+|.+... .....+++.+|+++++.++|+|++++++++.... ..++||
T Consensus 20 ~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~lv~ 94 (308)
T cd06634 20 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREH-----TAWLVM 94 (308)
T ss_pred HHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCC-----eeEEEE
Confidence 34589999999999999988889999998642 2334567889999999999999999999988766 679999
Q ss_pred EeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccC
Q 041479 603 EFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMS 678 (771)
Q Consensus 603 e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 678 (771)
||+. |++.+. ...+++.++..++.|++.|+.|||+. +++||||||+||+++.++.+|++|||++......
T Consensus 95 e~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~-- 168 (308)
T cd06634 95 EYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA-- 168 (308)
T ss_pred EccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHhEEECCCCcEEECCcccceeecCc--
Confidence 9997 566443 34578889999999999999999985 8999999999999999999999999998754332
Q ss_pred Ccccccccccccccccchh------------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCc
Q 041479 679 SNQCSSVGLKGTVGYATPE------------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDP 740 (771)
Q Consensus 679 ~~~~~~~~~~gt~~y~aPE------------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 740 (771)
....|++.|+||| +||++||+++|+.||.+.... .....+.....+.......+.
T Consensus 169 ------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 241 (308)
T cd06634 169 ------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-SALYHIAQNESPALQSGHWSE 241 (308)
T ss_pred ------ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHH-HHHHHHhhcCCCCcCcccccH
Confidence 1235788999999 599999999999998653221 112333333333333344556
Q ss_pred cccccCcccChhchhhcCCHHHHHHH
Q 041479 741 LFLVGGVQEGEETAEENIKKGQIRES 766 (771)
Q Consensus 741 ~~~~~~~~cl~~~p~~Rpt~~~vl~~ 766 (771)
.+.....+||..+|++||++.++++.
T Consensus 242 ~~~~li~~cl~~~P~~Rp~~~~ll~~ 267 (308)
T cd06634 242 YFRNFVDSCLQKIPQDRPTSEVLLKH 267 (308)
T ss_pred HHHHHHHHHhhCCcccCCCHHHHhhC
Confidence 66667779999999999999999864
No 326
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.95 E-value=6e-28 Score=249.48 Aligned_cols=226 Identities=26% Similarity=0.324 Sum_probs=181.7
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeeccch--hhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEE
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLHQR--GALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYE 603 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e 603 (771)
...+|+|.+|.||+|+...+++.||+|.+..... ...+.+.+|++++++++||||+++++++.+.+ ..+++||
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-----~~~~v~e 79 (254)
T cd06627 5 GDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSD-----SLYIILE 79 (254)
T ss_pred eeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCC-----EEEEEEe
Confidence 3467899999999999998888999999966543 45678999999999999999999999987765 7899999
Q ss_pred eccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCc
Q 041479 604 FMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSN 680 (771)
Q Consensus 604 ~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 680 (771)
|+++++|.++ ...+++..+..++.|++.|+.|||+. +|+||||||+||+++.++.+||+|||.+.........
T Consensus 80 ~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~- 155 (254)
T cd06627 80 YAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQ---GVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKD- 155 (254)
T ss_pred cCCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEECCCCCEEEeccccceecCCCccc-
Confidence 9999999766 34689999999999999999999985 9999999999999999999999999999866543221
Q ss_pred ccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCcccccc
Q 041479 681 QCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFLVG 745 (771)
Q Consensus 681 ~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 745 (771)
.....|+..|+||| +|+++||+++|+.||.+... ......... ......++.++..+...
T Consensus 156 ---~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~ 230 (254)
T cd06627 156 ---DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNP-MAALFRIVQ-DDHPPLPEGISPELKDF 230 (254)
T ss_pred ---ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccH-HHHHHHHhc-cCCCCCCCCCCHHHHHH
Confidence 22345888999999 69999999999999865321 111111111 12233444555666666
Q ss_pred CcccChhchhhcCCHHHHHH
Q 041479 746 GVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 746 ~~~cl~~~p~~Rpt~~~vl~ 765 (771)
..+|+..+|++|||+.+++.
T Consensus 231 i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 231 LMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred HHHHHhCChhhCcCHHHHhc
Confidence 77999999999999999874
No 327
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.95 E-value=4.3e-28 Score=259.52 Aligned_cols=181 Identities=22% Similarity=0.269 Sum_probs=148.0
Q ss_pred ccccccccceEEEEEecC--CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEE
Q 041479 527 VSYESLVKATVYKGILDL--DQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALV 601 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~--~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv 601 (771)
..+|+|.+|.||+|..+. .++.||+|.+.... ....+.+.+|+.++++++||||+++++++.+... ...++|
T Consensus 6 ~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~---~~~~lv 82 (316)
T cd07842 6 GCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHAD---KSVYLL 82 (316)
T ss_pred EEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCC---ceEEEE
Confidence 348999999999999988 77899999997632 3445778899999999999999999999987621 168999
Q ss_pred EEeccCCCCCCC--------cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCC----CCceEEecccC
Q 041479 602 YEFMHHGSLESC--------PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN----DMTAHMGDFGL 669 (771)
Q Consensus 602 ~e~~~~g~L~~~--------~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~----~~~~kl~DfGl 669 (771)
|||+++ ++.+. ...+++..+..++.|++.|++|||+. +|+||||||+||+++. ++.+|++|||+
T Consensus 83 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~ 158 (316)
T cd07842 83 FDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDLKPANILVMGEGPERGVVKIGDLGL 158 (316)
T ss_pred EeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEEcCCCCccceEEECCCcc
Confidence 999975 44322 12578888999999999999999985 8999999999999999 89999999999
Q ss_pred ccccCcccCCcccccccccccccccchh----------------HHHHHHHHHhCCCCCCcc
Q 041479 670 TRFIPEVMSSNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDM 715 (771)
Q Consensus 670 a~~~~~~~~~~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~ 715 (771)
++........ ........+++.|+||| +||++|||++|+.||.+.
T Consensus 159 ~~~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~ 219 (316)
T cd07842 159 ARLFNAPLKP-LADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGR 219 (316)
T ss_pred ccccCCCccc-ccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCC
Confidence 9865443221 12223456889999999 699999999999999643
No 328
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.95 E-value=6.8e-29 Score=261.67 Aligned_cols=227 Identities=24% Similarity=0.292 Sum_probs=173.7
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEE
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYE 603 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e 603 (771)
...+|+|.+|.||+|.++.+++.||+|++.... ....+.+.+|+++++.++||||+++++++.... ..|+|||
T Consensus 6 ~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~lv~e 80 (286)
T cd07846 6 LGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKK-----RLYLVFE 80 (286)
T ss_pred eeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCC-----eEEEEEe
Confidence 345899999999999999888899999985432 234567889999999999999999999987665 7899999
Q ss_pred eccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCc
Q 041479 604 FMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSN 680 (771)
Q Consensus 604 ~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 680 (771)
|++++++..+ ...+++.++..++.|++.|++|||+. +|+|||++|+||++++++.+|++|||+++.......
T Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~-- 155 (286)
T cd07846 81 FVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE-- 155 (286)
T ss_pred cCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCcEEEEeeeeeeeccCCcc--
Confidence 9999888655 23588999999999999999999985 899999999999999999999999999876543221
Q ss_pred ccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHH--hh-------------
Q 041479 681 QCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVK--MA------------- 729 (771)
Q Consensus 681 ~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~--~~------------- 729 (771)
......|+..|+||| |||++||+++|+.||...... ..+..... ..
T Consensus 156 --~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (286)
T cd07846 156 --VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDI-DQLYHIIKCLGNLIPRHQEIFQKNP 232 (286)
T ss_pred --ccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchH-HHHHHHHHHhCCCchhhHHHhccch
Confidence 112345788999999 699999999999988532110 00111000 00
Q ss_pred ------CCC--------chhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 730 ------LPD--------QILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 730 ------~~~--------~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
.+. .....++..+.....+||..+|++||++.++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 233 LFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred HhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 000 001122334445566999999999999999885
No 329
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.95 E-value=1.4e-30 Score=287.17 Aligned_cols=364 Identities=27% Similarity=0.318 Sum_probs=260.4
Q ss_pred cEEEEEcCCCCCcccCCccccCCCCCcEEEcCCCcccccCCccccCCCCCCEEecccCcCcccCC---------------
Q 041479 45 RVILLNLSGQNLTGTASPYIGNLTFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNALQGQIP--------------- 109 (771)
Q Consensus 45 ~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p--------------- 109 (771)
+++.|.++.|.|. ..|.+..++.+|++|+|.+|.+. ..|..+..+++|++|++|.|++. .+|
T Consensus 69 ~L~~ln~s~n~i~-~vp~s~~~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS~N~f~-~~Pl~i~~lt~~~~~~~s 145 (1081)
T KOG0618|consen 69 HLRQLNLSRNYIR-SVPSSCSNMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLSFNHFG-PIPLVIEVLTAEEELAAS 145 (1081)
T ss_pred HHhhcccchhhHh-hCchhhhhhhcchhheeccchhh-cCchhHHhhhcccccccchhccC-CCchhHHhhhHHHHHhhh
Confidence 4455555555554 33344555555555555555554 25555555555555555555543 222
Q ss_pred --------------cccccCCcccccCCccccCCCCCCEEecccccCc----CCC--------------------Cccce
Q 041479 110 --------------DSRLILNKLEGNIPSELGSLLKFKGLGLANNYFT----GPI--------------------PHLNM 151 (771)
Q Consensus 110 --------------~~~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~----~~l--------------------p~L~~ 151 (771)
...+..|.+.+.++..+..++. .|+|++|.+. ..+ |+++.
T Consensus 146 ~N~~~~~lg~~~ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~~~dls~~~~l~~l~c~rn~ls~l~~~g~~l~~ 223 (1081)
T KOG0618|consen 146 NNEKIQRLGQTSIKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEMEVLDLSNLANLEVLHCERNQLSELEISGPSLTA 223 (1081)
T ss_pred cchhhhhhccccchhhhhhhhhcccchhcchhhhhe--eeecccchhhhhhhhhccchhhhhhhhcccceEEecCcchhe
Confidence 2235556666777777776666 6788877776 122 33555
Q ss_pred eeecccccccccCccccCCCCCCEEecccCcCcccCChhhhhCCCCCcEEEeecCcccccCCccccCCCCCCEEEccccc
Q 041479 152 FQVSVYSLTGSIPIQLLNITSMEYFHVSENQLVGELPPHIGFTLPNVRILLLAGNQFFGNIPHSISNASKLEWLDFANNS 231 (771)
Q Consensus 152 l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 231 (771)
++.++|.++...+. ..=.+|+++++|+|+++ .+|+.+. .+.+|+.++..+|+|+ .+|..+...++|+.|++.+|.
T Consensus 224 L~a~~n~l~~~~~~--p~p~nl~~~dis~n~l~-~lp~wi~-~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~ne 298 (1081)
T KOG0618|consen 224 LYADHNPLTTLDVH--PVPLNLQYLDISHNNLS-NLPEWIG-ACANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNE 298 (1081)
T ss_pred eeeccCcceeeccc--cccccceeeecchhhhh-cchHHHH-hcccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhh
Confidence 55555555522111 12247899999999998 7886555 8899999999999996 688888888999999999999
Q ss_pred cCCCCCcCcccccCCCCCcEEEccCccccccCChhhhhcc-cccceeecccCcCcccCcccccccCCcceEecCCcccee
Q 041479 232 LTGLIPEDLDSLVNCTYLEVVSLSVNSLSGTLPNSLANFS-SHLRYLYMSANPISGSIPTEIGNLKNLIIIAIEKFILIR 310 (771)
Q Consensus 232 l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~ 310 (771)
+..++| .. ..+++|++|+|..|+|. .+|+.+.... ..|+.|+.+.|++....--.=..++.|+.|++.+|.++.
T Consensus 299 l~yip~-~l---e~~~sL~tLdL~~N~L~-~lp~~~l~v~~~~l~~ln~s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd 373 (1081)
T KOG0618|consen 299 LEYIPP-FL---EGLKSLRTLDLQSNNLP-SLPDNFLAVLNASLNTLNVSSNKLSTLPSYEENNHAALQELYLANNHLTD 373 (1081)
T ss_pred hhhCCC-cc---cccceeeeeeehhcccc-ccchHHHhhhhHHHHHHhhhhccccccccccchhhHHHHHHHHhcCcccc
Confidence 986544 33 56789999999999998 7887665433 237888889998884332222346778999999999988
Q ss_pred ccCccccCCCCCCEEEccCCcccccCCcccccccccccccccCccceecCCcccccccce-eeecccCcccCCCCcCCCC
Q 041479 311 NIPISVGYLLKLQVLSLFENNISREIPSSLGNFTFLTELNLCGNSIRGSVPSALGSCHQL-WLDLSHNHLTGPIPLAVGN 389 (771)
Q Consensus 311 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l-~L~Ls~N~l~~~~p~~~~~ 389 (771)
..-+.+.+.+.|+.|+|++|+|.......+.++..|++|+||||+++ .+|..+..+..| .|...+|+|. ..| .+..
T Consensus 374 ~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~ 450 (1081)
T KOG0618|consen 374 SCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQ 450 (1081)
T ss_pred cchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhhh
Confidence 77778889999999999999998555557789999999999999999 688889999998 8999999998 566 7888
Q ss_pred CCCCCeEECCCCccccc-CCcchhhhhcccccccEEECcCCCC
Q 041479 390 PKSIPHLDLSKNELSGE-IPSSLAWIFGYISIFAKLNLSYNNL 431 (771)
Q Consensus 390 l~~L~~L~Ls~N~l~~~-~p~~l~~~~~~l~~L~~L~Ls~N~l 431 (771)
+++|+.+|+|.|+|+.. +|... ..++|++|||++|..
T Consensus 451 l~qL~~lDlS~N~L~~~~l~~~~-----p~p~LkyLdlSGN~~ 488 (1081)
T KOG0618|consen 451 LPQLKVLDLSCNNLSEVTLPEAL-----PSPNLKYLDLSGNTR 488 (1081)
T ss_pred cCcceEEecccchhhhhhhhhhC-----CCcccceeeccCCcc
Confidence 99999999999999843 44433 237899999999974
No 330
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.95 E-value=8.1e-28 Score=256.93 Aligned_cols=221 Identities=19% Similarity=0.205 Sum_probs=173.4
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEE
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYE 603 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e 603 (771)
..+|+|.+|+||+|+...+++.||+|++.... ....+++.+|++++++++|||++++++++.+.+ ..|+|||
T Consensus 27 ~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~~lv~e 101 (313)
T cd06633 27 HEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEH-----TAWLVME 101 (313)
T ss_pred eeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCC-----EEEEEEe
Confidence 34899999999999999889999999996432 234467889999999999999999999998876 7899999
Q ss_pred eccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCC
Q 041479 604 FMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSS 679 (771)
Q Consensus 604 ~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 679 (771)
|+.+ ++.+. ...+++.++..++.|++.|++|||+. +|+||||||+||+++.++.+|++|||++.....
T Consensus 102 ~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~---- 173 (313)
T cd06633 102 YCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFGSASKSSP---- 173 (313)
T ss_pred cCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhhEEECCCCCEEEeecCCCcccCC----
Confidence 9964 55433 34588999999999999999999985 899999999999999999999999999864321
Q ss_pred cccccccccccccccchh------------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCcc
Q 041479 680 NQCSSVGLKGTVGYATPE------------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPL 741 (771)
Q Consensus 680 ~~~~~~~~~gt~~y~aPE------------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 741 (771)
.....|+..|+||| +||++|||++|+.||.+..... ..........+......++..
T Consensus 174 ----~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 248 (313)
T cd06633 174 ----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-ALYHIAQNDSPTLQSNEWTDS 248 (313)
T ss_pred ----CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHhcCCCCCCccccCHH
Confidence 12345888999999 5999999999999986532111 122222222232223334444
Q ss_pred ccccCcccChhchhhcCCHHHHHH
Q 041479 742 FLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 742 ~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
+.....+||+.+|.+||++.++++
T Consensus 249 l~~li~~~l~~~P~~Rp~~~~~l~ 272 (313)
T cd06633 249 FRGFVDYCLQKIPQERPASAELLR 272 (313)
T ss_pred HHHHHHHHccCChhhCcCHHHHhc
Confidence 555667999999999999999985
No 331
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.95 E-value=4.1e-28 Score=251.34 Aligned_cols=225 Identities=20% Similarity=0.212 Sum_probs=174.5
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEe
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEF 604 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~ 604 (771)
..+|.|.+|.||+|..+.++..||+|.+.... ....+.+.+|++++++++||||+++++++...+ ..++|+||
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~-----~~~lv~e~ 80 (257)
T cd08225 6 KKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENG-----RLFIVMEY 80 (257)
T ss_pred EEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCC-----eEEEEEec
Confidence 45789999999999999988899999996542 234567889999999999999999999987766 78999999
Q ss_pred ccCCCCCCC-----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCC-ceEEecccCccccCcccC
Q 041479 605 MHHGSLESC-----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDM-TAHMGDFGLTRFIPEVMS 678 (771)
Q Consensus 605 ~~~g~L~~~-----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~-~~kl~DfGla~~~~~~~~ 678 (771)
+++++|.++ ...+++..+..++.|++.|++|||+. +++|+|+||+||++++++ .+|++|||.+........
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~ 157 (257)
T cd08225 81 CDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSME 157 (257)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEcCCCCeEEecccccchhccCCcc
Confidence 999999765 22478999999999999999999985 899999999999999875 469999999876543221
Q ss_pred Ccccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCcccc
Q 041479 679 SNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFL 743 (771)
Q Consensus 679 ~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 743 (771)
......|++.|+||| +|+++||+++|..||...... ....+...... .......+..+.
T Consensus 158 ----~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~ 231 (257)
T cd08225 158 ----LAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLH-QLVLKICQGYF-APISPNFSRDLR 231 (257)
T ss_pred ----cccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHH-HHHHHHhcccC-CCCCCCCCHHHH
Confidence 111235889999999 699999999999998643111 11111111111 222223344455
Q ss_pred ccCcccChhchhhcCCHHHHHH
Q 041479 744 VGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 744 ~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
....+|+..+|++|||+.|+++
T Consensus 232 ~~i~~~l~~~p~~Rpt~~~ll~ 253 (257)
T cd08225 232 SLISQLFKVSPRDRPSITSILK 253 (257)
T ss_pred HHHHHHhccChhhCcCHHHHhh
Confidence 5566999999999999999986
No 332
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.95 E-value=7.9e-28 Score=247.99 Aligned_cols=225 Identities=24% Similarity=0.272 Sum_probs=179.1
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEec
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFM 605 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~~ 605 (771)
...+|+|.+|.||++....+++.||+|++........+.+.+|++++++++||||+++++++.... ..++++||+
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-----~~~l~~e~~ 79 (253)
T cd05122 5 LEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKD-----ELWIVMEFC 79 (253)
T ss_pred eeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-----eEEEEEecC
Confidence 345789999999999999888899999997665556688999999999999999999999987765 679999999
Q ss_pred cCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCcc
Q 041479 606 HHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQ 681 (771)
Q Consensus 606 ~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 681 (771)
++++|.++ ...+++..+..++.|++.|+.|||+. +++||||+|+||+++.++.++|+|||.+........
T Consensus 80 ~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~--- 153 (253)
T cd05122 80 SGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA--- 153 (253)
T ss_pred CCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHHEEEccCCeEEEeecccccccccccc---
Confidence 99999776 24679999999999999999999985 999999999999999999999999999986654321
Q ss_pred cccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhh--cCccccc
Q 041479 682 CSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQV--LDPLFLV 744 (771)
Q Consensus 682 ~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 744 (771)
.....|+..|+||| +|+++|++++|+.||....... ................ ++..+..
T Consensus 154 --~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (253)
T cd05122 154 --RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMK--ALFKIATNGPPGLRNPEKWSDEFKD 229 (253)
T ss_pred --ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHH--HHHHHHhcCCCCcCcccccCHHHHH
Confidence 22345888999999 6999999999999986531111 1111111111111111 1444555
Q ss_pred cCcccChhchhhcCCHHHHHH
Q 041479 745 GGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 745 ~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
...+|+..||++|||+.++++
T Consensus 230 ~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 230 FLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred HHHHHccCChhhCCCHHHHhc
Confidence 667999999999999999975
No 333
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.95 E-value=3.7e-28 Score=257.16 Aligned_cols=229 Identities=22% Similarity=0.229 Sum_probs=172.0
Q ss_pred ccccccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEE
Q 041479 525 LNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
....+|+|.+|.||+|.++.+++.||+|.++... ......+.+|+.++++++||||+++++++...+. ...|+||
T Consensus 9 ~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~---~~~~lv~ 85 (293)
T cd07843 9 KLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNL---DKIYMVM 85 (293)
T ss_pred hhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCC---CcEEEEe
Confidence 3456799999999999999888899999997543 2234567889999999999999999999876621 1689999
Q ss_pred EeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccC
Q 041479 603 EFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMS 678 (771)
Q Consensus 603 e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 678 (771)
||+++ +|.+. ...+++.++..++.|++.||+|||+. +++||||||+||+++.++.+|++|||+++.......
T Consensus 86 e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~ 161 (293)
T cd07843 86 EYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLK 161 (293)
T ss_pred hhcCc-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCcEEEeecCceeeccCCcc
Confidence 99974 77544 23588999999999999999999985 899999999999999999999999999986544321
Q ss_pred Ccccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHh-------------h
Q 041479 679 SNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKM-------------A 729 (771)
Q Consensus 679 ~~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~-------------~ 729 (771)
......+++.|+||| +|+++|||++|+.||....... ........ .
T Consensus 162 ----~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 236 (293)
T cd07843 162 ----PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEID-QLNKIFKLLGTPTEKIWPGFSE 236 (293)
T ss_pred ----ccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCchHHHHHhhc
Confidence 112235788999999 6999999999999986432110 01100000 0
Q ss_pred CC----------------Cchhhh-cCccccccCcccChhchhhcCCHHHHHH
Q 041479 730 LP----------------DQILQV-LDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 730 ~~----------------~~~~~~-~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
++ ...+.. +++.+.....+|++.+|++|||+.|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 237 LPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred cchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 00 011111 2333444566999999999999999985
No 334
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.95 E-value=3.3e-28 Score=256.05 Aligned_cols=225 Identities=21% Similarity=0.265 Sum_probs=171.0
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEe
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEF 604 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~ 604 (771)
..+|+|.+|+||+|.++.+++.||||++.... ....+.+.+|++++++++||||+++++++.+.+ ..|++|||
T Consensus 5 ~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~-----~~~iv~e~ 79 (283)
T cd07835 5 EKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSEN-----KLYLVFEF 79 (283)
T ss_pred eEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCC-----eEEEEEec
Confidence 35789999999999999888899999996543 233467889999999999999999999988765 78999999
Q ss_pred ccCCCCCCC---c--ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCC
Q 041479 605 MHHGSLESC---P--RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSS 679 (771)
Q Consensus 605 ~~~g~L~~~---~--~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 679 (771)
++ ++|.++ . ..+++..+..++.|+++||+|||+. +++||||+|+||+++.++.+|++|||+++.......
T Consensus 80 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~- 154 (283)
T cd07835 80 LD-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVR- 154 (283)
T ss_pred cC-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCcEEEeecccccccCCCcc-
Confidence 95 577655 1 2578999999999999999999985 899999999999999999999999999976543221
Q ss_pred cccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhh--------------
Q 041479 680 NQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMA-------------- 729 (771)
Q Consensus 680 ~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~-------------- 729 (771)
......++..|+||| +|+++||+++|+.||.+..... ...++....
T Consensus 155 ---~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 230 (283)
T cd07835 155 ---TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEID-QLFRIFRTLGTPDEDVWPGVTSL 230 (283)
T ss_pred ---ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCChHHhhhhhhc
Confidence 111234688999999 6999999999999986432111 111111110
Q ss_pred ------CC-------CchhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 730 ------LP-------DQILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 730 ------~~-------~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
.+ ......+++.+.....+|++.||++|||+.|+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 231 PDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred hhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 00 0011122233334555999999999999999975
No 335
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.95 E-value=5.6e-28 Score=250.96 Aligned_cols=223 Identities=21% Similarity=0.255 Sum_probs=170.8
Q ss_pred cccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHH-hccCCCCceeEEEEeecCCCCCceeEEEEEE
Q 041479 528 SYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQAL-RNIRHRNLVKIITACSTSDFQGNYFRALVYE 603 (771)
Q Consensus 528 ~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l-~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e 603 (771)
.+|+|.+|.||+|.....++.||||.+.... ......+..|..++ ...+||||+++++++...+ ..|+|||
T Consensus 3 ~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~-----~~~lv~e 77 (260)
T cd05611 3 PISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKD-----YLYLVME 77 (260)
T ss_pred cCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCC-----eEEEEEe
Confidence 4789999999999998888899999986443 12233455565544 4458999999999998766 7899999
Q ss_pred eccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCc
Q 041479 604 FMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSN 680 (771)
Q Consensus 604 ~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 680 (771)
|+++++|.++ ...+++..+..++.|++.||.|||+. +++||||+|+||+++.++.+|++|||+++....
T Consensus 78 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~----- 149 (260)
T cd05611 78 YLNGGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE----- 149 (260)
T ss_pred ccCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEeecccceeccc-----
Confidence 9999999876 34678889999999999999999985 899999999999999999999999999875432
Q ss_pred ccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhC--CCchhhhcCcccc
Q 041479 681 QCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMAL--PDQILQVLDPLFL 743 (771)
Q Consensus 681 ~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 743 (771)
.....|++.|+||| +|+++||+++|..||...... ..+........ +......+++.+.
T Consensus 150 ---~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (260)
T cd05611 150 ---NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPD-AVFDNILSRRINWPEEVKEFCSPEAV 225 (260)
T ss_pred ---cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHH-HHHHHHHhcccCCCCcccccCCHHHH
Confidence 11235788999999 699999999999999653221 11222222221 2233334566666
Q ss_pred ccCcccChhchhhcCCHHHHHHHH
Q 041479 744 VGGVQEGEETAEENIKKGQIRESL 767 (771)
Q Consensus 744 ~~~~~cl~~~p~~Rpt~~~vl~~L 767 (771)
....+||+.+|++||++.++.+.|
T Consensus 226 ~~i~~~l~~~p~~R~~~~~~~~~l 249 (260)
T cd05611 226 DLINRLLCMDPAKRLGANGYQEIK 249 (260)
T ss_pred HHHHHHccCCHHHccCCCcHHHHH
Confidence 777799999999999776554433
No 336
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.95 E-value=7.9e-28 Score=249.06 Aligned_cols=231 Identities=21% Similarity=0.244 Sum_probs=182.5
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEe
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEF 604 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~ 604 (771)
-.+|+|.+|.||+|..+.+++.|++|++.... ....+.+.+|++++++++||||+++++.+.... ....++||||
T Consensus 6 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~---~~~~~lv~e~ 82 (260)
T cd06606 6 ELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEE---KNTLNIFLEY 82 (260)
T ss_pred eEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCC---CCeEEEEEEe
Confidence 45789999999999999888899999996554 245678999999999999999999999987762 0167999999
Q ss_pred ccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCcc
Q 041479 605 MHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQ 681 (771)
Q Consensus 605 ~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 681 (771)
+++++|.++ ...+++..+..++.|++.|++|||+. +++|+|++|+||+++.++.+||+|||.+.........
T Consensus 83 ~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~-- 157 (260)
T cd06606 83 VSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETG-- 157 (260)
T ss_pred cCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEcccccEEeccccccc--
Confidence 999999776 33688999999999999999999985 8999999999999999999999999999866543321
Q ss_pred cccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCccccccC
Q 041479 682 CSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFLVGG 746 (771)
Q Consensus 682 ~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 746 (771)
.......++..|+||| +|+++|++++|+.||......................+...+..+....
T Consensus 158 ~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i 237 (260)
T cd06606 158 EGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSGEPPEIPEHLSEEAKDFL 237 (260)
T ss_pred ccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccccCCCcCCCcccCHHHHHHH
Confidence 0122345888999999 6999999999999996542111111111111222334445566666677
Q ss_pred cccChhchhhcCCHHHHHH
Q 041479 747 VQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 747 ~~cl~~~p~~Rpt~~~vl~ 765 (771)
.+|++.+|++||++.++++
T Consensus 238 ~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 238 RKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred HHhCcCChhhCCCHHHHhh
Confidence 7999999999999999985
No 337
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.95 E-value=7e-28 Score=257.07 Aligned_cols=188 Identities=22% Similarity=0.309 Sum_probs=150.0
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCC---Ccee
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQ---GNYF 597 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~---~~~~ 597 (771)
+.....+|+|.+|+||+|+...+++.||||.+.... ......+.+|++++++++||||+++++++...... ....
T Consensus 14 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 93 (310)
T cd07865 14 YEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYKGS 93 (310)
T ss_pred eEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCCce
Confidence 444566899999999999999989999999986443 22345667899999999999999999998765421 1235
Q ss_pred EEEEEEeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCcccc
Q 041479 598 RALVYEFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673 (771)
Q Consensus 598 ~~lv~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~ 673 (771)
.++||||+.+ ++.+. ...+++.++..++.|++.||+|||+. +++||||||+||+++.++.+||+|||++...
T Consensus 94 ~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~ 169 (310)
T cd07865 94 FYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANILITKDGILKLADFGLARAF 169 (310)
T ss_pred EEEEEcCCCc-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECCCCcEEECcCCCcccc
Confidence 6999999975 66443 22578999999999999999999986 8999999999999999999999999999866
Q ss_pred CcccCCcccccccccccccccchh----------------HHHHHHHHHhCCCCCCc
Q 041479 674 PEVMSSNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSD 714 (771)
Q Consensus 674 ~~~~~~~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~ 714 (771)
...............++..|+||| +|+++|||++|+.||..
T Consensus 170 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~ 226 (310)
T cd07865 170 SLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQG 226 (310)
T ss_pred cCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCC
Confidence 433221111122345788999999 69999999999999854
No 338
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.95 E-value=1e-27 Score=249.73 Aligned_cols=232 Identities=19% Similarity=0.184 Sum_probs=178.9
Q ss_pred ccccccccccceEEEEEecCCCeEEEEEEeecc-----chhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEE
Q 041479 525 LNVSYESLVKATVYKGILDLDQTFIAVKVLFLH-----QRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRA 599 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~-----~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 599 (771)
....+|+|.+|.||+|++..+++.||+|.+... .....+.+.+|++++++++||||+++++++.+... ...+
T Consensus 6 ~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~---~~~~ 82 (264)
T cd06653 6 LGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEE---KKLS 82 (264)
T ss_pred eeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCC---CEEE
Confidence 345679999999999999988889999988532 12345688999999999999999999999865431 1578
Q ss_pred EEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcc
Q 041479 600 LVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676 (771)
Q Consensus 600 lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~ 676 (771)
+||||+++++|.++ ...+++.....++.|++.|++|||+. +++||||||+||+++.++.++|+|||+++.....
T Consensus 83 ~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~ 159 (264)
T cd06653 83 IFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFGASKRIQTI 159 (264)
T ss_pred EEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECccccccccccc
Confidence 99999999999766 24578888999999999999999986 8999999999999999999999999999865321
Q ss_pred cCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCcc
Q 041479 677 MSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPL 741 (771)
Q Consensus 677 ~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 741 (771)
... ........|+..|+||| +||++||+++|+.||.+..... ...+......++..++.+++.
T Consensus 160 ~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~p~~~~~~ 237 (264)
T cd06653 160 CMS-GTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMA-AIFKIATQPTKPMLPDGVSDA 237 (264)
T ss_pred ccc-CccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHH-HHHHHHcCCCCCCCCcccCHH
Confidence 111 11112346899999999 6999999999999997542211 122222222234445556666
Q ss_pred ccccCcccChhchhhcCCHHHHHH
Q 041479 742 FLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 742 ~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
+.....+|++ +|.+|||+.+++.
T Consensus 238 ~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 238 CRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred HHHHHHHHhc-CcccCccHHHHhc
Confidence 6666779998 5799999998764
No 339
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.95 E-value=6.4e-28 Score=257.98 Aligned_cols=224 Identities=22% Similarity=0.210 Sum_probs=165.6
Q ss_pred ccceEEEEEecCCCeEEEEEEeecc--chhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEeccCCCC
Q 041479 533 VKATVYKGILDLDQTFIAVKVLFLH--QRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSL 610 (771)
Q Consensus 533 ~~~~Vy~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~~~~g~L 610 (771)
..+.||.++...+++.||||++... .....+.+.+|++++++++||||+++++++.+.+ ..+++|||+++|++
T Consensus 12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~-----~~~~~~e~~~~~~l 86 (314)
T cd08216 12 DLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDS-----ELYVVSPLMAYGSC 86 (314)
T ss_pred CCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCC-----eEEEEEeccCCCCH
Confidence 4456666666777889999999654 3445678999999999999999999999987766 68999999999999
Q ss_pred CCC-----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCC---ccc
Q 041479 611 ESC-----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSS---NQC 682 (771)
Q Consensus 611 ~~~-----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~---~~~ 682 (771)
.++ ...+++.....++.|+++||+|||+. +|+||||||+||+++.++.+|++|||.+......... ...
T Consensus 87 ~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~ 163 (314)
T cd08216 87 EDLLKTHFPEGLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHD 163 (314)
T ss_pred HHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEEecCCceEEecCccceeecccccccccccc
Confidence 765 23578888999999999999999986 8999999999999999999999999998754322110 111
Q ss_pred ccccccccccccchh-----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCC-------------
Q 041479 683 SSVGLKGTVGYATPE-----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPD------------- 732 (771)
Q Consensus 683 ~~~~~~gt~~y~aPE-----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~------------- 732 (771)
......++..|+||| +||++||+++|+.||.+...... ..+...+..+.
T Consensus 164 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 242 (314)
T cd08216 164 FPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQM-LLEKVRGTVPCLLDKSTYPLYEDS 242 (314)
T ss_pred ccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHhccCccccccCchhhhcCC
Confidence 123345788899999 69999999999999975321111 11111111100
Q ss_pred -------------------chhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 733 -------------------QILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 733 -------------------~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
.....++..+.....+||..||++|||+.++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~ 294 (314)
T cd08216 243 MSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLN 294 (314)
T ss_pred cCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhc
Confidence 000111122223455899999999999999985
No 340
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.95 E-value=8.9e-28 Score=252.91 Aligned_cols=226 Identities=22% Similarity=0.322 Sum_probs=172.3
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeeccc-hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEe
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEF 604 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~ 604 (771)
...+|+|.+|+||+|++..+++.||||++.... ....+.+.+|++++++++||||+++++++.+.+ ..++||||
T Consensus 5 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-----~~~lv~e~ 79 (284)
T cd07836 5 LEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTEN-----KLMLVFEY 79 (284)
T ss_pred eeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCC-----cEEEEEec
Confidence 345789999999999999889999999997553 233467788999999999999999999998776 67999999
Q ss_pred ccCCCCCCC------cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccC
Q 041479 605 MHHGSLESC------PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMS 678 (771)
Q Consensus 605 ~~~g~L~~~------~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 678 (771)
+++ ++.++ ...+++..+..++.|++.||+|||+. +++||||||+||++++++.+|++|||+++.......
T Consensus 80 ~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~ 155 (284)
T cd07836 80 MDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVN 155 (284)
T ss_pred CCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcc
Confidence 985 66543 13578999999999999999999985 899999999999999999999999999975533211
Q ss_pred Ccccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHh--------------
Q 041479 679 SNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKM-------------- 728 (771)
Q Consensus 679 ~~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~-------------- 728 (771)
......+++.|+||| +||++||+++|+.||.+....+ ........
T Consensus 156 ----~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 230 (284)
T cd07836 156 ----TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNED-QLLKIFRIMGTPTESTWPGISQ 230 (284)
T ss_pred ----ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHHHhCCCChhhHHHHhc
Confidence 112235788999999 6999999999999997532211 01111100
Q ss_pred ------hCCC-------chhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 729 ------ALPD-------QILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 729 ------~~~~-------~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
..+. ......++.+.....+|++.||++||++.++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 231 LPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred CchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 0000 001122344445556999999999999999975
No 341
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.95 E-value=1.4e-27 Score=249.10 Aligned_cols=217 Identities=23% Similarity=0.241 Sum_probs=169.6
Q ss_pred cccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhcc-CCCCceeEEEEeecCCCCCceeEEEEEEecc
Q 041479 528 SYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNI-RHRNLVKIITACSTSDFQGNYFRALVYEFMH 606 (771)
Q Consensus 528 ~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~~~~lv~e~~~ 606 (771)
.+|+|.+|.||+++.+.+++.+|+|.+........ |+.....+ +||||+++++++...+ ..|+||||++
T Consensus 23 ~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~~~~~~-----~~~iv~e~~~ 92 (267)
T PHA03390 23 KLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYSVTTLK-----GHVLIMDYIK 92 (267)
T ss_pred eecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEEEecCC-----eeEEEEEcCC
Confidence 37999999999999999998999999864422111 22222222 6999999999998776 7899999999
Q ss_pred CCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCC-ceEEecccCccccCcccCCccc
Q 041479 607 HGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDM-TAHMGDFGLTRFIPEVMSSNQC 682 (771)
Q Consensus 607 ~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~-~~kl~DfGla~~~~~~~~~~~~ 682 (771)
+|+|.++ ...+++.++..++.|+++|++|||+. +++||||||+||+++.++ .++++|||+++......
T Consensus 93 ~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~----- 164 (267)
T PHA03390 93 DGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTPS----- 164 (267)
T ss_pred CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEeCCCCeEEEecCccceecCCCc-----
Confidence 9999776 33689999999999999999999985 899999999999999888 99999999987553221
Q ss_pred ccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhC-CCchhhhcCccccccC
Q 041479 683 SSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMAL-PDQILQVLDPLFLVGG 746 (771)
Q Consensus 683 ~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 746 (771)
...|+..|+||| +||++||+++|+.||.+.........++..... +....+.+++.+....
T Consensus 165 ---~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 241 (267)
T PHA03390 165 ---CYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQKKLPFIKNVSKNANDFV 241 (267)
T ss_pred ---cCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhcccCCcccccCHHHHHHH
Confidence 235789999999 699999999999999754333333334433321 1233445667776777
Q ss_pred cccChhchhhcCC-HHHHHH
Q 041479 747 VQEGEETAEENIK-KGQIRE 765 (771)
Q Consensus 747 ~~cl~~~p~~Rpt-~~~vl~ 765 (771)
.+|++.+|.+||+ ++++++
T Consensus 242 ~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 242 QSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred HHHhccChhhCCchHHHHhc
Confidence 7999999999996 688874
No 342
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.95 E-value=9e-28 Score=253.91 Aligned_cols=178 Identities=26% Similarity=0.387 Sum_probs=146.4
Q ss_pred ccccccccccceEEEEEecCCCeEEEEEEeeccc-hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEE
Q 041479 525 LNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYE 603 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e 603 (771)
....+|+|.+|.||+|..+.+++.||+|++.... ......+.+|+++++.++|+||+++++++.+.+ ..|+|||
T Consensus 9 ~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~-----~~~lv~e 83 (291)
T cd07870 9 NLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKE-----TLTFVFE 83 (291)
T ss_pred EEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCC-----eEEEEEe
Confidence 3456899999999999998888899999996543 233457789999999999999999999987765 6899999
Q ss_pred eccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCC
Q 041479 604 FMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSS 679 (771)
Q Consensus 604 ~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 679 (771)
|+. +++.+. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 84 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~- 158 (291)
T cd07870 84 YMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQ- 158 (291)
T ss_pred ccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEcCCCcEEEeccccccccCCCCC-
Confidence 996 565433 23467888889999999999999985 899999999999999999999999999975432211
Q ss_pred cccccccccccccccchh----------------HHHHHHHHHhCCCCCCcc
Q 041479 680 NQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDM 715 (771)
Q Consensus 680 ~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~ 715 (771)
......+++.|+||| +||++||+++|+.||.+.
T Consensus 159 ---~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~ 207 (291)
T cd07870 159 ---TYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGV 207 (291)
T ss_pred ---CCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCc
Confidence 112335788999999 699999999999999753
No 343
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.95 E-value=9.7e-28 Score=254.12 Aligned_cols=231 Identities=19% Similarity=0.195 Sum_probs=171.1
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccC-CCCceeEEEEeecCCCCCceeEEEEE
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIR-HRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
...+|+|.+|+||+|++..+++.||||++.... ......+.+|+.++++++ ||||+++++++...+..+....|+||
T Consensus 6 ~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~~~lv~ 85 (295)
T cd07837 6 LEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPSLYLVF 85 (295)
T ss_pred eeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCceEEEEe
Confidence 345799999999999999889999999986543 223467889999999995 69999999998766533334579999
Q ss_pred EeccCCCCCCC--------cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCC-CCceEEecccCcccc
Q 041479 603 EFMHHGSLESC--------PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN-DMTAHMGDFGLTRFI 673 (771)
Q Consensus 603 e~~~~g~L~~~--------~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~-~~~~kl~DfGla~~~ 673 (771)
||+++ ++.++ ...+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+|++|||+++..
T Consensus 86 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~~ 161 (295)
T cd07837 86 EYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKPQNLLVDKQKGLLKIADLGLGRAF 161 (295)
T ss_pred eccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEecCCCeEEEeecccceec
Confidence 99985 66544 13478999999999999999999985 9999999999999998 889999999998755
Q ss_pred CcccCCcccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHh-h-------
Q 041479 674 PEVMSSNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKM-A------- 729 (771)
Q Consensus 674 ~~~~~~~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~-~------- 729 (771)
..... ......+++.|+||| +|+++|||++|..||....... ........ .
T Consensus 162 ~~~~~----~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 236 (295)
T cd07837 162 SIPVK----SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQ-QLLHIFKLLGTPTEQVW 236 (295)
T ss_pred CCCcc----ccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHH-HHHHHHHHhCCCChhhC
Confidence 32211 111234688899999 6999999999999986421110 01111100 0
Q ss_pred -----------CC----C---chhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 730 -----------LP----D---QILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 730 -----------~~----~---~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
.+ . .....+++.+.....+|+..||++|||+.|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 237 PGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred cchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 00 0 001123444445566999999999999999975
No 344
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=99.95 E-value=3.4e-28 Score=256.61 Aligned_cols=228 Identities=21% Similarity=0.226 Sum_probs=174.9
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEE
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYE 603 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e 603 (771)
...+|+|.+|.||+|.++.+++.||||+++... ....+.+.+|++++++++|+||+++++++...+ ..++|||
T Consensus 6 ~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-----~~~iv~e 80 (288)
T cd07833 6 LGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKG-----RLYLVFE 80 (288)
T ss_pred EEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECC-----EEEEEEe
Confidence 345799999999999999888899999986542 334578999999999999999999999998765 6899999
Q ss_pred eccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCc
Q 041479 604 FMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSN 680 (771)
Q Consensus 604 ~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 680 (771)
|++++.+..+ ...+++.++..++.|++.|++|||+. +++|||++|+||++++++.+||+|||++........
T Consensus 81 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~-- 155 (288)
T cd07833 81 YVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVSESGVLKLCDFGFARALRARPA-- 155 (288)
T ss_pred cCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEEeeecccccCCCcc--
Confidence 9998776543 34578899999999999999999986 899999999999999999999999999987654321
Q ss_pred ccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHH--h--------------
Q 041479 681 QCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVK--M-------------- 728 (771)
Q Consensus 681 ~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~--~-------------- 728 (771)
.......++..|+||| +|+++||+++|+.||.+....+ .+..... .
T Consensus 156 -~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 233 (288)
T cd07833 156 -SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDID-QLYLIQKCLGPLPPSHQELFSSNP 233 (288)
T ss_pred -ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHHhhhcccCc
Confidence 1112346788999999 6999999999999986421110 0100000 0
Q ss_pred -----hCCC---------chhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 729 -----ALPD---------QILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 729 -----~~~~---------~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
..++ ..+..+++.+...+.+||..+|++|||++++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 234 RFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred cccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 0000 011122444445666999999999999999875
No 345
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.95 E-value=3.8e-28 Score=262.01 Aligned_cols=234 Identities=21% Similarity=0.223 Sum_probs=175.0
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEE
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYE 603 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e 603 (771)
...+|+|.+|.||+|+.+.+++.||+|++.... ....+.+.+|+.++++++||||+++++++.... ......|+|||
T Consensus 10 ~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-~~~~~~~lv~e 88 (334)
T cd07855 10 IENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPG-ADFKDVYVVMD 88 (334)
T ss_pred eeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccC-CCCceEEEEEe
Confidence 345799999999999999989999999986542 234567888999999999999999999876543 12236799999
Q ss_pred eccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCc
Q 041479 604 FMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSN 680 (771)
Q Consensus 604 ~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 680 (771)
|+. |+|.++ ...+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||+++.........
T Consensus 89 ~~~-~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~ 164 (334)
T cd07855 89 LME-SDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSA---NVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTEH 164 (334)
T ss_pred hhh-hhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEecccccceeecccCcCC
Confidence 996 577554 34588999999999999999999985 89999999999999999999999999997654332221
Q ss_pred ccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHH-----------------
Q 041479 681 QCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVK----------------- 727 (771)
Q Consensus 681 ~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~----------------- 727 (771)
........|+..|+||| +||++|||++|+.||.+..... .+.....
T Consensus 165 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~ 243 (334)
T cd07855 165 KYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVH-QLKLILSVLGSPSEEVLNRIGSDR 243 (334)
T ss_pred CcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHH-HHHHHHHHhCCChhHhhhhhchhh
Confidence 22223456899999999 6999999999999996532110 0000000
Q ss_pred -----hhCCC-------chhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 728 -----MALPD-------QILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 728 -----~~~~~-------~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
...+. ......+..+.....+|++.+|++|||+.++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 293 (334)
T cd07855 244 VRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQ 293 (334)
T ss_pred HHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 00110 011223444555667999999999999999886
No 346
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.95 E-value=6.3e-28 Score=259.62 Aligned_cols=178 Identities=23% Similarity=0.258 Sum_probs=143.1
Q ss_pred cccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEeccC
Q 041479 530 ESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHH 607 (771)
Q Consensus 530 ~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~~~~ 607 (771)
|.|.+++||++++..+++.||||++.... ....+.+.+|+.+++.++||||+++++++...+ ..++||||+.+
T Consensus 9 g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~-----~~~~v~e~~~~ 83 (328)
T cd08226 9 GFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGS-----WLWVISPFMAY 83 (328)
T ss_pred cccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCC-----ceEEEEecccC
Confidence 44588899999999888999999986543 334578899999999999999999999998776 67999999999
Q ss_pred CCCCCC-----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCc--
Q 041479 608 GSLESC-----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSN-- 680 (771)
Q Consensus 608 g~L~~~-----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~-- 680 (771)
|++.++ ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+|++|||.+..........
T Consensus 84 ~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (328)
T cd08226 84 GSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQN---GYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKV 160 (328)
T ss_pred CCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccc
Confidence 998765 23478888899999999999999985 89999999999999999999999998654322211100
Q ss_pred -ccccccccccccccchh-----------------HHHHHHHHHhCCCCCCcc
Q 041479 681 -QCSSVGLKGTVGYATPE-----------------YGILLLEIFTGKRPTSDM 715 (771)
Q Consensus 681 -~~~~~~~~gt~~y~aPE-----------------~Gv~l~el~tg~~P~~~~ 715 (771)
........++..||||| +||++||+++|+.||.+.
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~ 213 (328)
T cd08226 161 VYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDM 213 (328)
T ss_pred cccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCc
Confidence 00111123566799999 699999999999999754
No 347
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.95 E-value=6.2e-28 Score=277.14 Aligned_cols=231 Identities=26% Similarity=0.302 Sum_probs=189.8
Q ss_pred cccccccceEEEEEecC-------CCeEEEEEEeeccc-hhhHHHHHHHHHHHhcc-CCCCceeEEEEeecCCCCCceeE
Q 041479 528 SYESLVKATVYKGILDL-------DQTFIAVKVLFLHQ-RGALKSFMAECQALRNI-RHRNLVKIITACSTSDFQGNYFR 598 (771)
Q Consensus 528 ~l~~~~~~~Vy~~~~~~-------~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~~~ 598 (771)
.+|+|.+|.|++|.... ....||||..+... ..+.+.+..|+++|+.+ +|||||.++|+|...+ ..
T Consensus 303 ~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~-----~~ 377 (609)
T KOG0200|consen 303 YLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDG-----PL 377 (609)
T ss_pred eeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCC-----ce
Confidence 89999999999997541 24689999996543 35678999999999999 5999999999998855 67
Q ss_pred EEEEEeccCCCCCCC--cc-----------------cCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCC
Q 041479 599 ALVYEFMHHGSLESC--PR-----------------ILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDND 659 (771)
Q Consensus 599 ~lv~e~~~~g~L~~~--~~-----------------~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~ 659 (771)
++|+||+..|+|..+ .. .+...+.+.++.|||.|++||++. ++||||+.++|||+..+
T Consensus 378 ~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~---~~vHRDLAaRNVLi~~~ 454 (609)
T KOG0200|consen 378 YVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV---PCVHRDLAARNVLITKN 454 (609)
T ss_pred EEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC---CccchhhhhhhEEecCC
Confidence 999999999999665 11 278889999999999999999985 89999999999999999
Q ss_pred CceEEecccCccccCcccCCcccccccccc--cccccchh---------------HHHHHHHHHh-CCCCCCccccCCcc
Q 041479 660 MTAHMGDFGLTRFIPEVMSSNQCSSVGLKG--TVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLD 721 (771)
Q Consensus 660 ~~~kl~DfGla~~~~~~~~~~~~~~~~~~g--t~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~ 721 (771)
..+||+|||+|+.......... .+..| ...||||| |||++||++| |..||.++. ....
T Consensus 455 ~~~kIaDFGlar~~~~~~~y~~---~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~-~~~~ 530 (609)
T KOG0200|consen 455 KVIKIADFGLARDHYNKDYYRT---KSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIP-PTEE 530 (609)
T ss_pred CEEEEccccceeccCCCCceEe---cCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCC-cHHH
Confidence 9999999999996544332211 11122 45699999 8999999999 999998743 2233
Q ss_pred HHHHHHhhCCCchhhhcCccccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 722 LHNFVKMALPDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 722 ~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
+.++.+.+.+...+..+...+...+..||+.+|++||+..++++.++..
T Consensus 531 l~~~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~ 579 (609)
T KOG0200|consen 531 LLEFLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKH 579 (609)
T ss_pred HHHHHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHH
Confidence 5667777777677777788887888899999999999999999998864
No 348
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.95 E-value=1.8e-27 Score=251.91 Aligned_cols=227 Identities=21% Similarity=0.252 Sum_probs=167.8
Q ss_pred ccccccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEE
Q 041479 525 LNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
....+|+|.+|+||+|+++.+++.||||.+.... ....+.+.+|++++++++||||+++++++.... ..|+||
T Consensus 6 ~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~lv~ 80 (294)
T PLN00009 6 KVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEK-----RLYLVF 80 (294)
T ss_pred EEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCC-----eEEEEE
Confidence 3456789999999999999888899999986442 233467889999999999999999999988766 789999
Q ss_pred EeccCCCCCCC-----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCC-CCceEEecccCccccCcc
Q 041479 603 EFMHHGSLESC-----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN-DMTAHMGDFGLTRFIPEV 676 (771)
Q Consensus 603 e~~~~g~L~~~-----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~-~~~~kl~DfGla~~~~~~ 676 (771)
||+++ ++.+. ...+++.....++.|++.||+|||+. +|+||||||+||+++. ++.+|++|||+++.....
T Consensus 81 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~ 156 (294)
T PLN00009 81 EYLDL-DLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIP 156 (294)
T ss_pred ecccc-cHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcceEEEECCCCEEEEcccccccccCCC
Confidence 99964 66443 12246777889999999999999985 8999999999999985 567999999999754332
Q ss_pred cCCcccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHH-------------
Q 041479 677 MSSNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVK------------- 727 (771)
Q Consensus 677 ~~~~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~------------- 727 (771)
.. ......|++.|+||| +||++||++||+.||......+. +.+...
T Consensus 157 ~~----~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 231 (294)
T PLN00009 157 VR----TFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDE-LFKIFRILGTPNEETWPGV 231 (294)
T ss_pred cc----ccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhCCCChhhcccc
Confidence 11 112235788999999 69999999999999864211111 111110
Q ss_pred -------hhCC---Cc----hhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 728 -------MALP---DQ----ILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 728 -------~~~~---~~----~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
...+ .. ....+++.+.....+|++.+|++||++.++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 232 TSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred ccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0000 00 01122333444556999999999999999985
No 349
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.95 E-value=1.6e-27 Score=250.64 Aligned_cols=224 Identities=22% Similarity=0.178 Sum_probs=167.1
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeeccc-hhhHHHHHHHHHHHhccC-CCCceeEEEEeecCCCCCceeEEEEEEe
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLHQ-RGALKSFMAECQALRNIR-HRNLVKIITACSTSDFQGNYFRALVYEF 604 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~~~~~~lv~e~ 604 (771)
..+|+|.+|.||+|+.+.+++.||+|++.... ........+|+.++.++. ||||+++++++.+.... ..++||||
T Consensus 5 ~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~---~~~lv~e~ 81 (282)
T cd07831 5 GKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTG---RLALVFEL 81 (282)
T ss_pred eeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCC---cEEEEEec
Confidence 34789999999999999888899999986432 222334568999999986 99999999998876211 67999999
Q ss_pred ccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCc
Q 041479 605 MHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSN 680 (771)
Q Consensus 605 ~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 680 (771)
+++ ++.+. ...+++.++..++.|++.||+|||+. +|+||||||+||+++. +.+||+|||+++........
T Consensus 82 ~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~~- 155 (282)
T cd07831 82 MDM-NLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPENILIKD-DILKLADFGSCRGIYSKPPY- 155 (282)
T ss_pred CCc-cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEcC-CCeEEEecccccccccCCCc-
Confidence 975 65443 23589999999999999999999985 8999999999999999 99999999999865432211
Q ss_pred ccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHh-----------hCC-C
Q 041479 681 QCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKM-----------ALP-D 732 (771)
Q Consensus 681 ~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~-----------~~~-~ 732 (771)
....++..|+||| +||++|||++|+.||.+.... ........ ..+ .
T Consensus 156 ----~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 229 (282)
T cd07831 156 ----TEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNEL--DQIAKIHDVLGTPDAEVLKKFRKS 229 (282)
T ss_pred ----CCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHH--HHHHHHHHHcCCCCHHHHHhhccc
Confidence 1235788999999 699999999999999643211 11111110 000 0
Q ss_pred -----ch-----------hhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 733 -----QI-----------LQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 733 -----~~-----------~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
.. ...++..+.....+||+++|++|||+.++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 230 RHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred ccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 00 0122334445566999999999999999986
No 350
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.95 E-value=1.3e-27 Score=251.86 Aligned_cols=228 Identities=23% Similarity=0.278 Sum_probs=172.1
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEe
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEF 604 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~ 604 (771)
..+|+|.+|.||+|+...+++.||||++.... ....+.+.+|++++++++||||+++++++.... ....++||||
T Consensus 5 ~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~---~~~~~lv~e~ 81 (287)
T cd07840 5 AQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKG---KGSIYMVFEY 81 (287)
T ss_pred EEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCC---CCcEEEEecc
Confidence 45789999999999999888899999997653 344567899999999999999999999987762 1168999999
Q ss_pred ccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCc
Q 041479 605 MHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSN 680 (771)
Q Consensus 605 ~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 680 (771)
+++ +|.+. ...+++.++..++.|++.|++|||+. +++|+||||+||++++++.+|++|||++........
T Consensus 82 ~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~-- 155 (287)
T cd07840 82 MDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNILINNDGVLKLADFGLARPYTKRNS-- 155 (287)
T ss_pred ccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEcCCCCEEEccccceeeccCCCc--
Confidence 975 76554 23688999999999999999999985 899999999999999999999999999986644321
Q ss_pred ccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhh---------------
Q 041479 681 QCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMA--------------- 729 (771)
Q Consensus 681 ~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~--------------- 729 (771)
.......++..|+||| ||+++||+++|+.||.+.... ..+.......
T Consensus 156 -~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (287)
T cd07840 156 -ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTEL-EQLEKIFELCGSPTDENWPGVSKLP 233 (287)
T ss_pred -ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCchhhccccccch
Confidence 1112335688899999 699999999999998643211 0111111100
Q ss_pred ------CCCch--------hhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 730 ------LPDQI--------LQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 730 ------~~~~~--------~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
..... .....+.+.....+||..+|++|||+.++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 234 WFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred hhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 00000 0111223334455999999999999999985
No 351
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.95 E-value=9.6e-28 Score=248.37 Aligned_cols=223 Identities=22% Similarity=0.233 Sum_probs=180.0
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEe
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEF 604 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~ 604 (771)
..+|+|.+|.||+++.+.+++.||+|.+.... .....++.+|++++++++||||+++++++.+.. ..++||||
T Consensus 6 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-----~~~~v~e~ 80 (256)
T cd08530 6 KKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGN-----KLCIVMEY 80 (256)
T ss_pred eeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCC-----EEEEEehh
Confidence 45788999999999998888899999996542 344567889999999999999999999987765 78999999
Q ss_pred ccCCCCCCCc-------ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCccc
Q 041479 605 MHHGSLESCP-------RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVM 677 (771)
Q Consensus 605 ~~~g~L~~~~-------~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~ 677 (771)
+++++|.++. ..+++..+..++.|++.|++|||+. +++||||+|+||+++.++.+|++|||+++......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~ 157 (256)
T cd08530 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSANILLVANDLVKIGDLGISKVLKKNM 157 (256)
T ss_pred cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEEecCCcEEEeeccchhhhccCC
Confidence 9999997662 4578889999999999999999985 89999999999999999999999999998765431
Q ss_pred CCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCccc
Q 041479 678 SSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLF 742 (771)
Q Consensus 678 ~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 742 (771)
. ....|++.|+||| +|+++||+++|+.||..... ..+................+..+
T Consensus 158 ~------~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 229 (256)
T cd08530 158 A------KTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSM--QDLRYKVQRGKYPPIPPIYSQDL 229 (256)
T ss_pred c------ccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHhcCCCCCCchhhCHHH
Confidence 1 1235788999999 69999999999999965321 12222222222233344556666
Q ss_pred cccCcccChhchhhcCCHHHHHH
Q 041479 743 LVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 743 ~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
.....+|++.+|++|||+.++++
T Consensus 230 ~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 230 QNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred HHHHHHHcCCCcccCCCHHHHhc
Confidence 67777999999999999999985
No 352
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.95 E-value=1.2e-27 Score=253.54 Aligned_cols=232 Identities=22% Similarity=0.214 Sum_probs=174.8
Q ss_pred cccccccccccccceEEEEEecCCCeEEEEEEeeccc-hhhHHHHHHHHHHHhccC-CCCceeEEEEeecCCCCCceeEE
Q 041479 522 DLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ-RGALKSFMAECQALRNIR-HRNLVKIITACSTSDFQGNYFRA 599 (771)
Q Consensus 522 ~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~~~~~~ 599 (771)
++.....+|+|.+|+||+|.++.+++.||||++.... ......+.+|+.++.+.+ ||||+++++++.+.. ..|
T Consensus 16 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~-----~~~ 90 (296)
T cd06618 16 DLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDS-----DVF 90 (296)
T ss_pred hheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCC-----eEE
Confidence 3445567899999999999999888899999996543 334567778888777775 999999999998766 689
Q ss_pred EEEEeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCc
Q 041479 600 LVYEFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPE 675 (771)
Q Consensus 600 lv~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~ 675 (771)
+||||+++ ++... ...+++..+..++.|++.|++|||+. .+|+||||+|+||++++++.+||+|||++.....
T Consensus 91 ~v~e~~~~-~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~--~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~ 167 (296)
T cd06618 91 ICMELMST-CLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEK--HGVIHRDVKPSNILLDASGNVKLCDFGISGRLVD 167 (296)
T ss_pred EEeeccCc-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhh--CCEecCCCcHHHEEEcCCCCEEECccccchhccC
Confidence 99999854 55433 34588899999999999999999973 3899999999999999999999999999976543
Q ss_pred ccCCcccccccccccccccchh-------------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCC-chh
Q 041479 676 VMSSNQCSSVGLKGTVGYATPE-------------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPD-QIL 735 (771)
Q Consensus 676 ~~~~~~~~~~~~~gt~~y~aPE-------------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~-~~~ 735 (771)
.... ....++..|+||| ||+++|||++|+.||.........+..+.....+. ...
T Consensus 168 ~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (296)
T cd06618 168 SKAK-----TRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEPPSLPPN 242 (296)
T ss_pred CCcc-----cCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCCCCCCCCC
Confidence 2211 1234788899998 69999999999999964211111122222222111 111
Q ss_pred hhcCccccccCcccChhchhhcCCHHHHHHH
Q 041479 736 QVLDPLFLVGGVQEGEETAEENIKKGQIRES 766 (771)
Q Consensus 736 ~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~ 766 (771)
..++..+.....+||..||++||++.++++.
T Consensus 243 ~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 243 EGFSPDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred CCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 1244555666779999999999999999753
No 353
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.95 E-value=1.9e-27 Score=253.64 Aligned_cols=231 Identities=23% Similarity=0.229 Sum_probs=170.8
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccch--hhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQR--GALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRAL 600 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~l 600 (771)
+.....+|+|.+|.||+|.++.+++.||+|+++.... .....+.+|++++++++|+||+++++++...... ..++
T Consensus 9 y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~---~~~l 85 (309)
T cd07845 9 FEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLD---SIFL 85 (309)
T ss_pred eeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCC---eEEE
Confidence 3344558999999999999998888999999965432 2234567899999999999999999998754321 5799
Q ss_pred EEEeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcc
Q 041479 601 VYEFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676 (771)
Q Consensus 601 v~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~ 676 (771)
||||+++ +|.+. ...+++.++..++.|++.|++|||+. +++||||||+||+++.++.+||+|||+++.....
T Consensus 86 v~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~ 161 (309)
T cd07845 86 VMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLP 161 (309)
T ss_pred EEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccceeeecCCc
Confidence 9999975 55433 34588999999999999999999996 8999999999999999999999999999865432
Q ss_pred cCCcccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhh-----------
Q 041479 677 MSSNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMA----------- 729 (771)
Q Consensus 677 ~~~~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~----------- 729 (771)
.. ......+++.|+||| +||++|||++|+.||.+..... .+.......
T Consensus 162 ~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 236 (309)
T cd07845 162 AK----PMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIE-QLDLIIQLLGTPNESIWPGF 236 (309)
T ss_pred cC----CCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCChhhchhh
Confidence 21 111224578899999 6999999999999996432111 111111100
Q ss_pred ----------CCCc----h---hhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 730 ----------LPDQ----I---LQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 730 ----------~~~~----~---~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
.+.. . ....++.......+|++.||++|||+.++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~ 289 (309)
T cd07845 237 SDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALE 289 (309)
T ss_pred hcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 0000 0 0112333334556999999999999999985
No 354
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.95 E-value=2.9e-27 Score=244.83 Aligned_cols=225 Identities=22% Similarity=0.269 Sum_probs=180.1
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEe
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEF 604 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~ 604 (771)
-.+|.|.+|.||++.+..+++.||+|++.... ....+.+.+|++++++++|||++++++.+...+ ..++|+||
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~-----~~~lv~e~ 80 (258)
T cd08215 6 KQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKG-----KLCIVMEY 80 (258)
T ss_pred eeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCC-----EEEEEEEe
Confidence 34789999999999999888899999997553 245678899999999999999999999987765 78999999
Q ss_pred ccCCCCCCC-------cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCccc
Q 041479 605 MHHGSLESC-------PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVM 677 (771)
Q Consensus 605 ~~~g~L~~~-------~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~ 677 (771)
+++++|.+. ...+++.++..++.+++.|+.|||+. +++|+||+|+||+++.++.++++|||.+.......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 157 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV 157 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeEEcCCCcEEECCccceeecccCc
Confidence 999998665 25688999999999999999999986 99999999999999999999999999998654432
Q ss_pred CCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCccc
Q 041479 678 SSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLF 742 (771)
Q Consensus 678 ~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 742 (771)
. ......|++.|+||| +|+++|++++|+.||..... ..+............+...+..+
T Consensus 158 ~----~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 231 (258)
T cd08215 158 D----LAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENL--LELALKILKGQYPPIPSQYSSEL 231 (258)
T ss_pred c----eecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcH--HHHHHHHhcCCCCCCCCCCCHHH
Confidence 1 112246889999999 69999999999999865321 11222222222233334445555
Q ss_pred cccCcccChhchhhcCCHHHHHH
Q 041479 743 LVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 743 ~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
.....+||..+|++|||+.++++
T Consensus 232 ~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 232 RNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred HHHHHHHcCCChhhCcCHHHHhc
Confidence 56677999999999999999985
No 355
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.95 E-value=1.6e-27 Score=257.57 Aligned_cols=234 Identities=24% Similarity=0.321 Sum_probs=173.1
Q ss_pred ccccccccccceEEEEEecCCCeEEEEEEeecc--chhhHHHHHHHHHHHhcc-CCCCceeEEEEeecCCCCCceeEEEE
Q 041479 525 LNVSYESLVKATVYKGILDLDQTFIAVKVLFLH--QRGALKSFMAECQALRNI-RHRNLVKIITACSTSDFQGNYFRALV 601 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~~~~lv 601 (771)
....+|+|.+|.||+|.+..+++.||||++... .......+.+|+.+++++ +||||+++++++...+. ...|+|
T Consensus 11 ~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~---~~~~lv 87 (337)
T cd07852 11 ILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAEND---KDIYLV 87 (337)
T ss_pred HhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCC---ceEEEE
Confidence 345579999999999999988889999998542 233446788899999999 99999999999865432 257999
Q ss_pred EEeccCCCCCCC--cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCC
Q 041479 602 YEFMHHGSLESC--PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSS 679 (771)
Q Consensus 602 ~e~~~~g~L~~~--~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 679 (771)
|||++ ++|... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 88 ~e~~~-~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~~ 163 (337)
T cd07852 88 FEYME-TDLHAVIRANILEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEEN 163 (337)
T ss_pred ecccc-cCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeeccchhcccccccc
Confidence 99997 477665 23678888999999999999999985 9999999999999999999999999999865433211
Q ss_pred -cccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHh--------------
Q 041479 680 -NQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKM-------------- 728 (771)
Q Consensus 680 -~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~-------------- 728 (771)
.........||+.|+||| +|+++|||++|+.||.+..... ........
T Consensus 164 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 242 (337)
T cd07852 164 PENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLN-QLEKIIEVIGPPSAEDIESIKS 242 (337)
T ss_pred ccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCCHHHHHHHHh
Confidence 011223356899999999 6999999999999986421110 00000000
Q ss_pred --------hCC-------CchhhhcCccccccCcccChhchhhcCCHHHHHHH
Q 041479 729 --------ALP-------DQILQVLDPLFLVGGVQEGEETAEENIKKGQIRES 766 (771)
Q Consensus 729 --------~~~-------~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~ 766 (771)
..+ ......++..+.....+||+.||++|||+.++++.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 243 PFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred hhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 000 00111123344455669999999999999999853
No 356
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.95 E-value=2.2e-27 Score=250.50 Aligned_cols=230 Identities=20% Similarity=0.165 Sum_probs=176.0
Q ss_pred ccccccccceEEEEEec---CCCeEEEEEEeeccc----hhhHHHHHHHHHHHhcc-CCCCceeEEEEeecCCCCCceeE
Q 041479 527 VSYESLVKATVYKGILD---LDQTFIAVKVLFLHQ----RGALKSFMAECQALRNI-RHRNLVKIITACSTSDFQGNYFR 598 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~---~~~~~vAvK~~~~~~----~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~~~ 598 (771)
..+|+|.+|+||+++.. .+++.||||++.... ....+.+..|++++.++ +||||+++++.+.... ..
T Consensus 6 ~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~-----~~ 80 (288)
T cd05583 6 RVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDT-----KL 80 (288)
T ss_pred EEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCC-----EE
Confidence 35799999999999864 355789999986432 23346788999999999 5999999999877665 67
Q ss_pred EEEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCc
Q 041479 599 ALVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPE 675 (771)
Q Consensus 599 ~lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~ 675 (771)
++||||+++|+|.+. ...+++.....++.|+++||+|||+. +++||||||+||+++.++.++++|||+++....
T Consensus 81 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 157 (288)
T cd05583 81 HLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQL---GIIYRDIKLENILLDSEGHVVLTDFGLSKEFLA 157 (288)
T ss_pred EEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEEECcccccccc
Confidence 999999999999765 34578889999999999999999985 899999999999999999999999999876543
Q ss_pred ccCCcccccccccccccccchh-----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhC--CCchhh
Q 041479 676 VMSSNQCSSVGLKGTVGYATPE-----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMAL--PDQILQ 736 (771)
Q Consensus 676 ~~~~~~~~~~~~~gt~~y~aPE-----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~--~~~~~~ 736 (771)
... .......|+..|+||| +|+++|||++|+.||...-. .....++..... ....+.
T Consensus 158 ~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~ 233 (288)
T cd05583 158 EEE---ERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGE-QNSQSEISRRILKSKPPFPK 233 (288)
T ss_pred ccc---cccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcc-cchHHHHHHHHHccCCCCCc
Confidence 321 1122345889999999 69999999999999853211 111122221111 123344
Q ss_pred hcCccccccCcccChhchhhcCCHHHHHHHHH
Q 041479 737 VLDPLFLVGGVQEGEETAEENIKKGQIRESLI 768 (771)
Q Consensus 737 ~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~ 768 (771)
.+++.+.....+||+.||++|||+.++.+.|+
T Consensus 234 ~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~ 265 (288)
T cd05583 234 TMSAEARDFIQKLLEKDPKKRLGANGADEIKN 265 (288)
T ss_pred ccCHHHHHHHHHHhcCCHhhccCcchHHHHhc
Confidence 45666666777999999999999888876654
No 357
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.95 E-value=1.7e-27 Score=258.90 Aligned_cols=180 Identities=22% Similarity=0.234 Sum_probs=147.0
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeecc--chhhHHHHHHHHHHHhccCCCCceeEEEEeecCCC-CCceeEEEEE
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLH--QRGALKSFMAECQALRNIRHRNLVKIITACSTSDF-QGNYFRALVY 602 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~-~~~~~~~lv~ 602 (771)
...+|+|.+|+||+|+...+++.||||++... .....+++.+|+.++++++||||+++++++..... .+....|+||
T Consensus 21 ~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~ 100 (353)
T cd07850 21 LKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQDVYLVM 100 (353)
T ss_pred EEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccCcEEEEE
Confidence 34579999999999999988999999998543 23345678899999999999999999998864431 1223579999
Q ss_pred EeccCCCCCCC-cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCcc
Q 041479 603 EFMHHGSLESC-PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQ 681 (771)
Q Consensus 603 e~~~~g~L~~~-~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 681 (771)
||+.+ ++.+. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+|++|||+++.......
T Consensus 101 e~~~~-~l~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~--- 173 (353)
T cd07850 101 ELMDA-NLCQVIQMDLDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFM--- 173 (353)
T ss_pred eccCC-CHHHHHhhcCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCccceeCCCCCC---
Confidence 99965 66543 33478889999999999999999986 999999999999999999999999999986543221
Q ss_pred cccccccccccccchh---------------HHHHHHHHHhCCCCCCc
Q 041479 682 CSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSD 714 (771)
Q Consensus 682 ~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~ 714 (771)
.....|++.|+||| +||++|+|++|+.||..
T Consensus 174 --~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~ 219 (353)
T cd07850 174 --MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPG 219 (353)
T ss_pred --CCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCC
Confidence 22345789999999 69999999999999853
No 358
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.95 E-value=1.6e-27 Score=257.35 Aligned_cols=233 Identities=20% Similarity=0.182 Sum_probs=173.7
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeecc--chhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEE
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLH--QRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYE 603 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e 603 (771)
...+|+|.+|+||+|+...+++.||||.+... .......+.+|+.+++.++||||+++++++...........|+|||
T Consensus 10 ~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e 89 (337)
T cd07858 10 IKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDVYIVYE 89 (337)
T ss_pred EEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcEEEEEe
Confidence 34689999999999999998999999998643 2334567789999999999999999999876554222235799999
Q ss_pred eccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCc
Q 041479 604 FMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSN 680 (771)
Q Consensus 604 ~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 680 (771)
|+. ++|.+. ...+++..+..++.|++.||.|||+. +++||||||+||+++.++.+||+|||+++.......
T Consensus 90 ~~~-~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~-- 163 (337)
T cd07858 90 LMD-TDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLLLNANCDLKICDFGLARTTSEKGD-- 163 (337)
T ss_pred CCC-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcCccccccCCCcc--
Confidence 996 566544 34688999999999999999999985 899999999999999999999999999986543211
Q ss_pred ccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccC----------------------CccH
Q 041479 681 QCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTE----------------------GLDL 722 (771)
Q Consensus 681 ~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~----------------------~~~~ 722 (771)
......|+..|+||| +||++|||++|+.||.+.... ....
T Consensus 164 --~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (337)
T cd07858 164 --FMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKA 241 (337)
T ss_pred --cccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhh
Confidence 112345788999999 699999999999998542100 0001
Q ss_pred HHHHHhhCC---C---chhhhcCccccccCcccChhchhhcCCHHHHHHH
Q 041479 723 HNFVKMALP---D---QILQVLDPLFLVGGVQEGEETAEENIKKGQIRES 766 (771)
Q Consensus 723 ~~~~~~~~~---~---~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~ 766 (771)
.++...... . ...+.+++.+.....+|++.+|++|||+.++++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h 291 (337)
T cd07858 242 RRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAH 291 (337)
T ss_pred hHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcC
Confidence 111110000 0 0112234444456669999999999999999864
No 359
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.95 E-value=2.9e-27 Score=251.43 Aligned_cols=233 Identities=22% Similarity=0.205 Sum_probs=171.9
Q ss_pred ccccccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCC-----CCCcee
Q 041479 525 LNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSD-----FQGNYF 597 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~-----~~~~~~ 597 (771)
....+|+|.+|+||+|.++.+++.||||+++... ......+.+|++++++++||||+++++++.+.. ..+...
T Consensus 11 ~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~ 90 (302)
T cd07864 11 IIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFKKDKGA 90 (302)
T ss_pred eeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhhccccCCc
Confidence 3456799999999999999888899999996543 234467889999999999999999999986643 111226
Q ss_pred EEEEEEeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCcccc
Q 041479 598 RALVYEFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673 (771)
Q Consensus 598 ~~lv~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~ 673 (771)
.++|+||+++ ++... ...+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+|||++...
T Consensus 91 ~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~kl~dfg~~~~~ 166 (302)
T cd07864 91 FYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIKCSNILLNNKGQIKLADFGLARLY 166 (302)
T ss_pred EEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCcEEeCcccccccc
Confidence 7999999986 44332 23588999999999999999999985 9999999999999999999999999999866
Q ss_pred CcccCCcccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHH---hhCCCc-
Q 041479 674 PEVMSSNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVK---MALPDQ- 733 (771)
Q Consensus 674 ~~~~~~~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~---~~~~~~- 733 (771)
..... .......++..|+||| +||++||+++|+.||...... ..+..+.. ...+..
T Consensus 167 ~~~~~---~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 242 (302)
T cd07864 167 NSEES---RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQEL-AQLELISRLCGSPCPAVW 242 (302)
T ss_pred cCCcc---cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCChhhc
Confidence 43321 1111234677899999 699999999999998642110 01111111 110000
Q ss_pred ------------------------hhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 734 ------------------------ILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 734 ------------------------~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
....+++.+.....+||..||++|||+.++++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 243 PDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred ccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 01122344445566999999999999999975
No 360
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.95 E-value=2.7e-28 Score=252.59 Aligned_cols=224 Identities=24% Similarity=0.269 Sum_probs=176.9
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEE
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYE 603 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e 603 (771)
...+|+|.||+||-|.++.+|+.||||+++..+ .+....++.|+.|++.++||.||.+.-.|++.+ ..|.|||
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~e-----rvFVVME 643 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPE-----RVFVVME 643 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCc-----eEEEEeh
Confidence 456899999999999999999999999996553 455678999999999999999999999998887 7899999
Q ss_pred eccCCCCCCC-----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCC---CceEEecccCccccCc
Q 041479 604 FMHHGSLESC-----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDND---MTAHMGDFGLTRFIPE 675 (771)
Q Consensus 604 ~~~~g~L~~~-----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~---~~~kl~DfGla~~~~~ 675 (771)
-+. ||.-++ ..++++.....++.||+.||.|||.. +|+|+|+||+|||+.+. -.+|+||||.||++++
T Consensus 644 Kl~-GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~k---nIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgE 719 (888)
T KOG4236|consen 644 KLH-GDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFK---NIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGE 719 (888)
T ss_pred hhc-chHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhc---ceeeccCCchheeeccCCCCCceeeccccceeecch
Confidence 995 454333 56788888889999999999999985 99999999999999643 4699999999999877
Q ss_pred ccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCc
Q 041479 676 VMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDP 740 (771)
Q Consensus 676 ~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 740 (771)
.. .....+|||.|.||| .||++|.-++|..||-+--... +..+-+.-++|+..+..+++
T Consensus 720 ks-----FRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdIn-dQIQNAaFMyPp~PW~eis~ 793 (888)
T KOG4236|consen 720 KS-----FRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDIN-DQIQNAAFMYPPNPWSEISP 793 (888)
T ss_pred hh-----hhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccchh-HHhhccccccCCCchhhcCH
Confidence 44 344578999999999 4999999999999995321111 12223344556555555555
Q ss_pred cccccCcccChhchhhcCCHHHHH
Q 041479 741 LFLVGGVQEGEETAEENIKKGQIR 764 (771)
Q Consensus 741 ~~~~~~~~cl~~~p~~Rpt~~~vl 764 (771)
.-.+.+...++..-.+|-|+...+
T Consensus 794 ~AidlIn~LLqVkm~kRysvdk~l 817 (888)
T KOG4236|consen 794 EAIDLINNLLQVKMRKRYSVDKSL 817 (888)
T ss_pred HHHHHHHHHHHHHHHHhcchHhhc
Confidence 554555566777777888776654
No 361
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.95 E-value=2.9e-27 Score=250.27 Aligned_cols=238 Identities=19% Similarity=0.167 Sum_probs=164.0
Q ss_pred ccccccccccceEEEEEecCC---CeEEEEEEeeccchhh-----------HHHHHHHHHHHhccCCCCceeEEEEeecC
Q 041479 525 LNVSYESLVKATVYKGILDLD---QTFIAVKVLFLHQRGA-----------LKSFMAECQALRNIRHRNLVKIITACSTS 590 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~~---~~~vAvK~~~~~~~~~-----------~~~~~~E~~~l~~l~H~nIv~l~~~~~~~ 590 (771)
....+|+|++|+||+|++..+ +..+|+|+........ ......+...+..+.|+||+++++++...
T Consensus 16 i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~ 95 (294)
T PHA02882 16 IDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGCGSFK 95 (294)
T ss_pred EeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEeeeEe
Confidence 344589999999999998877 6677777654332111 11223344556677899999999976554
Q ss_pred CCCCceeEEEEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecc
Q 041479 591 DFQGNYFRALVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDF 667 (771)
Q Consensus 591 ~~~~~~~~~lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~Df 667 (771)
. ....+.++++|++.. ++.+. ....++..+..++.|++.|++|||+. +|+||||||+|||++.++.+||+||
T Consensus 96 ~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDiKp~Nill~~~~~~~l~DF 170 (294)
T PHA02882 96 R-CRMYYRFILLEKLVE-NTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEH---GISHGDIKPENIMVDGNNRGYIIDY 170 (294)
T ss_pred c-CCceEEEEEEehhcc-CHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCcEEEEEc
Confidence 3 122355788887743 33222 23356778889999999999999985 8999999999999999999999999
Q ss_pred cCccccCcccCCc---ccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHH----HH
Q 041479 668 GLTRFIPEVMSSN---QCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLH----NF 725 (771)
Q Consensus 668 Gla~~~~~~~~~~---~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~----~~ 725 (771)
|+|+......... ........||+.|+||| +||++|||++|+.||.+......... ++
T Consensus 171 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~~~ 250 (294)
T PHA02882 171 GIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKCDF 250 (294)
T ss_pred CCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHHHH
Confidence 9998664322111 11122346999999999 79999999999999976532221111 11
Q ss_pred HHhhCCCc-hhhhcCccccccCcccChhchhhcCCHHHHHHHH
Q 041479 726 VKMALPDQ-ILQVLDPLFLVGGVQEGEETAEENIKKGQIRESL 767 (771)
Q Consensus 726 ~~~~~~~~-~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L 767 (771)
........ .....++.+......|+..+|++||++.++++.+
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 251 IKRLHEGKIKIKNANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred HHHhhhhhhccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 11111111 1112234455566799999999999999999876
No 362
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.95 E-value=3.4e-27 Score=254.80 Aligned_cols=229 Identities=19% Similarity=0.209 Sum_probs=169.5
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeeccchhh--------------HHHHHHHHHHHhccCCCCceeEEEEeecCCC
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGA--------------LKSFMAECQALRNIRHRNLVKIITACSTSDF 592 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~--------------~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~ 592 (771)
..+|+|.+|+||+|+++.+++.||||.+....... ...+.+|++++++++||||+++++++...+
T Consensus 15 ~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~- 93 (335)
T PTZ00024 15 AHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDVYVEGD- 93 (335)
T ss_pred hcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEEEecCC-
Confidence 45899999999999999888899999986442111 125789999999999999999999988776
Q ss_pred CCceeEEEEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccC
Q 041479 593 QGNYFRALVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGL 669 (771)
Q Consensus 593 ~~~~~~~lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl 669 (771)
..++||||++ |+|.+. ...+++.....++.|++.||+|||+. +|+||||||+||+++.++.+|++|||+
T Consensus 94 ----~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~~~nill~~~~~~kl~dfg~ 165 (335)
T PTZ00024 94 ----FINLVMDIMA-SDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKW---YFMHRDLSPANIFINSKGICKIADFGL 165 (335)
T ss_pred ----cEEEEEeccc-cCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHeEECCCCCEEECCccc
Confidence 7899999997 577655 34578889999999999999999985 999999999999999999999999999
Q ss_pred ccccCcccC----------Ccccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHH
Q 041479 670 TRFIPEVMS----------SNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLH 723 (771)
Q Consensus 670 a~~~~~~~~----------~~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~ 723 (771)
++....... ..........+++.|+||| +||++||+++|+.||.+....+ .+.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~-~~~ 244 (335)
T PTZ00024 166 ARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEID-QLG 244 (335)
T ss_pred eeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHH
Confidence 976541110 0011112335688999999 6999999999999986432111 011
Q ss_pred HHHH---hh----C----------------CCchh---hhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 724 NFVK---MA----L----------------PDQIL---QVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 724 ~~~~---~~----~----------------~~~~~---~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
.... .. + +.... ...+..+.....+|++.+|++|||+.|++.
T Consensus 245 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 312 (335)
T PTZ00024 245 RIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALK 312 (335)
T ss_pred HHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhc
Confidence 1110 00 0 00000 111233334555999999999999999985
No 363
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.95 E-value=2.9e-28 Score=219.99 Aligned_cols=176 Identities=24% Similarity=0.363 Sum_probs=148.0
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEE
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYE 603 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e 603 (771)
...+|+|.+||||||+.+++.+.||+|+++..+ ++.....++||++++.++|+|||++++....+. ...+|+|
T Consensus 7 mekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdk-----kltlvfe 81 (292)
T KOG0662|consen 7 MEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDK-----KLTLVFE 81 (292)
T ss_pred HHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCc-----eeEEeHH
Confidence 446899999999999999999999999997654 455678899999999999999999999977665 7899999
Q ss_pred eccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCC
Q 041479 604 FMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSS 679 (771)
Q Consensus 604 ~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 679 (771)
||.. +|..+ ...++......++.|+.+|+.|+|++ .+.|||+||.|.||..+|+.|++|||+|+.++-..
T Consensus 82 ~cdq-dlkkyfdslng~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin~ngelkladfglarafgipv-- 155 (292)
T KOG0662|consen 82 FCDQ-DLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLINRNGELKLADFGLARAFGIPV-- 155 (292)
T ss_pred HhhH-HHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEeccCCcEEecccchhhhcCCce--
Confidence 9964 66444 45678888999999999999999996 89999999999999999999999999999765432
Q ss_pred cccccccccccccccchh----------------HHHHHHHHHh-CCCCCCc
Q 041479 680 NQCSSVGLKGTVGYATPE----------------YGILLLEIFT-GKRPTSD 714 (771)
Q Consensus 680 ~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~t-g~~P~~~ 714 (771)
.|.+ ..+-|.+|++|. -||++.|+.. |++-|.+
T Consensus 156 -rcys-aevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg 205 (292)
T KOG0662|consen 156 -RCYS-AEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPG 205 (292)
T ss_pred -Eeee-ceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCC
Confidence 2322 235699999998 2999999988 6665543
No 364
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.95 E-value=1.9e-27 Score=257.30 Aligned_cols=234 Identities=21% Similarity=0.243 Sum_probs=172.4
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCC---------Cce
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQ---------GNY 596 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~---------~~~ 596 (771)
.-.+|.|.+|+||+|+...+++.||+|.+........+.+.+|++++++++||||+++++++...... ...
T Consensus 10 ~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (342)
T cd07854 10 LRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGSLTELN 89 (342)
T ss_pred EEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccccccccc
Confidence 44579999999999999998899999999776656667899999999999999999999887654311 112
Q ss_pred eEEEEEEeccCCCCCCC--cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCC-CCceEEecccCcccc
Q 041479 597 FRALVYEFMHHGSLESC--PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN-DMTAHMGDFGLTRFI 673 (771)
Q Consensus 597 ~~~lv~e~~~~g~L~~~--~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~-~~~~kl~DfGla~~~ 673 (771)
..|+||||++ ++|.+. ...+++.....++.|++.||+|||+. +|+||||||+||+++. ++.+|++|||+++..
T Consensus 90 ~~~lv~e~~~-~~L~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp~Nili~~~~~~~kl~dfg~~~~~ 165 (342)
T cd07854 90 SVYIVQEYME-TDLANVLEQGPLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVFINTEDLVLKIGDFGLARIV 165 (342)
T ss_pred eEEEEeeccc-ccHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCceEEECCcccceec
Confidence 5789999997 577654 24588999999999999999999985 8999999999999974 567899999999765
Q ss_pred CcccCCcccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHh---------
Q 041479 674 PEVMSSNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKM--------- 728 (771)
Q Consensus 674 ~~~~~~~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~--------- 728 (771)
....... .......|+..|+||| +||++|||++|+.||.+...... .......
T Consensus 166 ~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~ 243 (342)
T cd07854 166 DPHYSHK-GYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQ-MQLILESVPVVREEDR 243 (342)
T ss_pred CCccccc-cccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHhcCCCChHHh
Confidence 4322111 1112235788999999 69999999999999965321110 0000000
Q ss_pred --------------hC-C-C---chhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 729 --------------AL-P-D---QILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 729 --------------~~-~-~---~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
.. + . .....++..+.....+|++.||.+|||+.++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 299 (342)
T cd07854 244 NELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM 299 (342)
T ss_pred hhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence 00 0 0 001123333444566999999999999999984
No 365
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.95 E-value=8e-27 Score=246.51 Aligned_cols=227 Identities=21% Similarity=0.198 Sum_probs=172.8
Q ss_pred ccccccccceEEEEEec---CCCeEEEEEEeeccc----hhhHHHHHHHHHHHhcc-CCCCceeEEEEeecCCCCCceeE
Q 041479 527 VSYESLVKATVYKGILD---LDQTFIAVKVLFLHQ----RGALKSFMAECQALRNI-RHRNLVKIITACSTSDFQGNYFR 598 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~---~~~~~vAvK~~~~~~----~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~~~ 598 (771)
..+|+|.+|.||++... .+++.||+|++.... ....+.+.+|+++++++ +|+||+++++++.... ..
T Consensus 6 ~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~-----~~ 80 (290)
T cd05613 6 KVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDT-----KL 80 (290)
T ss_pred eeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCC-----eE
Confidence 35799999999999874 356799999996432 22346788999999999 5999999999887665 67
Q ss_pred EEEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCc
Q 041479 599 ALVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPE 675 (771)
Q Consensus 599 ~lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~ 675 (771)
|+||||+++++|.++ ...+++.....++.|++.||+|||+. +++||||||+||+++.++.+||+|||+++....
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~ 157 (290)
T cd05613 81 HLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGLSKEFHE 157 (290)
T ss_pred EEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEECCCCCEEEeeCccceeccc
Confidence 999999999999765 34578888889999999999999985 999999999999999999999999999986543
Q ss_pred ccCCcccccccccccccccchh-----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhC--CCchhh
Q 041479 676 VMSSNQCSSVGLKGTVGYATPE-----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMAL--PDQILQ 736 (771)
Q Consensus 676 ~~~~~~~~~~~~~gt~~y~aPE-----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~--~~~~~~ 736 (771)
... .......|+..|+||| +|+++||+++|+.||.... ......++..... ....++
T Consensus 158 ~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~ 233 (290)
T cd05613 158 DEV---ERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDG-EKNSQAEISRRILKSEPPYPQ 233 (290)
T ss_pred ccc---cccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCC-ccccHHHHHHHhhccCCCCCc
Confidence 221 1112345889999999 6999999999999985321 1112222222211 122334
Q ss_pred hcCccccccCcccChhchhhcC-----CHHHHHH
Q 041479 737 VLDPLFLVGGVQEGEETAEENI-----KKGQIRE 765 (771)
Q Consensus 737 ~~~~~~~~~~~~cl~~~p~~Rp-----t~~~vl~ 765 (771)
.+++.+.....+|++.||++|| ++.+++.
T Consensus 234 ~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~ 267 (290)
T cd05613 234 EMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK 267 (290)
T ss_pred cCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence 4566666667799999999997 6666653
No 366
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.94 E-value=5e-27 Score=253.10 Aligned_cols=234 Identities=21% Similarity=0.175 Sum_probs=170.9
Q ss_pred ccccccccceEEEEEecCC--CeEEEEEEeecc--chhhHHHHHHHHHHHhcc-CCCCceeEEEEeecCCCCCceeEEEE
Q 041479 527 VSYESLVKATVYKGILDLD--QTFIAVKVLFLH--QRGALKSFMAECQALRNI-RHRNLVKIITACSTSDFQGNYFRALV 601 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~--~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~~~~lv 601 (771)
..+|+|.+|.||+++.... ++.||||++... .....+.+.+|+++++++ +||||+++++++.... ......|++
T Consensus 6 ~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~-~~~~~~~~~ 84 (332)
T cd07857 6 KELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFP-GNFNELYLY 84 (332)
T ss_pred EEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeecc-ccCCcEEEE
Confidence 3578999999999999887 889999998643 223356788999999999 4999999999765431 112256899
Q ss_pred EEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccC
Q 041479 602 YEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMS 678 (771)
Q Consensus 602 ~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 678 (771)
+||+. ++|.+. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 85 ~e~~~-~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~ 160 (332)
T cd07857 85 EELME-ADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKPGNLLVNADCELKICDFGLARGFSENPG 160 (332)
T ss_pred Eeccc-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHeEEcCCCCEEeCcCCCceecccccc
Confidence 99986 577554 34688999999999999999999986 899999999999999999999999999986543322
Q ss_pred Ccccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCc--------------cHHHHHHh
Q 041479 679 SNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGL--------------DLHNFVKM 728 (771)
Q Consensus 679 ~~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~--------------~~~~~~~~ 728 (771)
..........||+.|+||| +||++||+++|+.||........ .+..+...
T Consensus 161 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (332)
T cd07857 161 ENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSP 240 (332)
T ss_pred cccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhhh
Confidence 1112223456899999999 69999999999999864211000 00000000
Q ss_pred ----------hCC-C---chhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 729 ----------ALP-D---QILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 729 ----------~~~-~---~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
..+ . ......+..+.....+|++.||++|||+.+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~ 291 (332)
T cd07857 241 KAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALE 291 (332)
T ss_pred hHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 000 0 111122444555666999999999999999874
No 367
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.94 E-value=8.4e-29 Score=235.01 Aligned_cols=239 Identities=21% Similarity=0.248 Sum_probs=177.8
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeecc--chhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCC---Ccee
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLH--QRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQ---GNYF 597 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~---~~~~ 597 (771)
.+..-..|+|.+|.||+|+.+.+++.||+|++... .++.....++|++++..++|+|++.+++.|.+.... ....
T Consensus 19 yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t 98 (376)
T KOG0669|consen 19 YEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRAT 98 (376)
T ss_pred HHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccce
Confidence 34445679999999999999999999999988654 345667889999999999999999999988653321 2235
Q ss_pred EEEEEEeccCCCCCC----CcccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCcccc
Q 041479 598 RALVYEFMHHGSLES----CPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673 (771)
Q Consensus 598 ~~lv~e~~~~g~L~~----~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~ 673 (771)
.|+||++|+. +|.. ...+++..++.+++.++..||.|+|.. .|+|||+||+|+||+.+|.+|++|||+|+.+
T Consensus 99 ~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt~dgilklADFGlar~f 174 (376)
T KOG0669|consen 99 FYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLITKDGILKLADFGLARAF 174 (376)
T ss_pred eeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEcCCceEEeeccccccce
Confidence 7999999986 5443 345788999999999999999999986 8999999999999999999999999999876
Q ss_pred CcccCCcccccccccccccccchh----------------HHHHHHHHHhCCCCCCc--------------------ccc
Q 041479 674 PEVMSSNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSD--------------------MFT 717 (771)
Q Consensus 674 ~~~~~~~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~--------------------~~~ 717 (771)
..........-+..+-|.+|++|| -||++.||.||.+-+++ .|+
T Consensus 175 s~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP 254 (376)
T KOG0669|consen 175 STSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWP 254 (376)
T ss_pred ecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCC
Confidence 554433333334556799999999 29999999999876542 343
Q ss_pred CCccHHHHHHhh---CCCchhhhc---------CccccccCcccChhchhhcCCHHHHHH
Q 041479 718 EGLDLHNFVKMA---LPDQILQVL---------DPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 718 ~~~~~~~~~~~~---~~~~~~~~~---------~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
.-..+.-|..-. ++......+ |+.-.+..++++..||++|+++++++.
T Consensus 255 ~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~aln 314 (376)
T KOG0669|consen 255 NVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALN 314 (376)
T ss_pred CcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhc
Confidence 322222222221 121111111 111113344889999999999999875
No 368
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.94 E-value=7.4e-27 Score=240.86 Aligned_cols=219 Identities=28% Similarity=0.274 Sum_probs=173.9
Q ss_pred ccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEec
Q 041479 529 YESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFM 605 (771)
Q Consensus 529 l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~~ 605 (771)
+|+|.+|.||++.....++.||+|++.... ......+..|++++++++||||+++++.+.... ..++||||+
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~~v~e~~ 75 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEE-----KLYLVLEYA 75 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCC-----eeEEEEecC
Confidence 588999999999998888899999986543 234568899999999999999999999887665 789999999
Q ss_pred cCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCccc
Q 041479 606 HHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQC 682 (771)
Q Consensus 606 ~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 682 (771)
++++|.++ ...+++.....++.|+++|+.|+|+. +++|+||||+||+++.++.++++|||++........
T Consensus 76 ~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~---- 148 (250)
T cd05123 76 PGGELFSHLSKEGRFSEERARFYAAEIVLALEYLHSL---GIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGS---- 148 (250)
T ss_pred CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcceEEEcCCCcEEEeecCcceecccCCC----
Confidence 99999766 33578999999999999999999985 999999999999999999999999999976543211
Q ss_pred ccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCccccccCc
Q 041479 683 SSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFLVGGV 747 (771)
Q Consensus 683 ~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 747 (771)
......|+..|+||| +|+++||+++|+.||..... ....+.... .....+...+..+.....
T Consensus 149 ~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~--~~~~~~~~~-~~~~~~~~~~~~l~~~i~ 225 (250)
T cd05123 149 RTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR--KEIYEKILK-DPLRFPEFLSPEARDLIS 225 (250)
T ss_pred cccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH--HHHHHHHhc-CCCCCCCCCCHHHHHHHH
Confidence 122345788999999 69999999999999964311 112222211 222334444555566677
Q ss_pred ccChhchhhcCCHHH
Q 041479 748 QEGEETAEENIKKGQ 762 (771)
Q Consensus 748 ~cl~~~p~~Rpt~~~ 762 (771)
+||..||++|||+.+
T Consensus 226 ~~l~~~p~~R~~~~~ 240 (250)
T cd05123 226 GLLQKDPTKRLGSGG 240 (250)
T ss_pred HHhcCCHhhCCCccc
Confidence 999999999999943
No 369
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.94 E-value=9.4e-27 Score=251.95 Aligned_cols=229 Identities=24% Similarity=0.247 Sum_probs=171.7
Q ss_pred ccccccccccceEEEEEecCCCeEEEEEEeecc--chhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCC-ceeEEEE
Q 041479 525 LNVSYESLVKATVYKGILDLDQTFIAVKVLFLH--QRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQG-NYFRALV 601 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~-~~~~~lv 601 (771)
....+|+|.+|+||+|+...+++.||||++... .....+.+.+|++++++++||||+++++++....... ....++|
T Consensus 19 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv 98 (343)
T cd07880 19 DLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRFHDFYLV 98 (343)
T ss_pred EEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccccccceEEEE
Confidence 345689999999999999988899999998543 2334467889999999999999999999986543211 1246899
Q ss_pred EEeccCCCCCCC--cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCC
Q 041479 602 YEFMHHGSLESC--PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSS 679 (771)
Q Consensus 602 ~e~~~~g~L~~~--~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 679 (771)
|||+ +++|..+ ...+++..+..++.|++.|++|||+. +|+||||||+||+++.++.+|++|||+++......
T Consensus 99 ~e~~-~~~l~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~-- 172 (343)
T cd07880 99 MPFM-GTDLGKLMKHEKLSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQTDSEM-- 172 (343)
T ss_pred EecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccccccccCc--
Confidence 9999 6787655 34688999999999999999999985 89999999999999999999999999998543221
Q ss_pred cccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhh--------------
Q 041479 680 NQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMA-------------- 729 (771)
Q Consensus 680 ~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~-------------- 729 (771)
....+++.|+||| +||++|++++|+.||.+..... ...+.....
T Consensus 173 -----~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 246 (343)
T cd07880 173 -----TGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLD-QLMEIMKVTGTPSKEFVQKLQSE 246 (343)
T ss_pred -----cccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCCHHHHHhhcch
Confidence 2345788999999 5999999999999996432110 111111100
Q ss_pred --------CC----C---chhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 730 --------LP----D---QILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 730 --------~~----~---~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
.+ . .....+++.+.....+|+..||++|||+.++++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~ 297 (343)
T cd07880 247 DAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALA 297 (343)
T ss_pred hHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 00 0 001122333334555899999999999999984
No 370
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.94 E-value=5.2e-27 Score=253.94 Aligned_cols=229 Identities=22% Similarity=0.233 Sum_probs=171.2
Q ss_pred ccccccccccceEEEEEecCCCeEEEEEEeecc--chhhHHHHHHHHHHHhccCCCCceeEEEEeecCCC-CCceeEEEE
Q 041479 525 LNVSYESLVKATVYKGILDLDQTFIAVKVLFLH--QRGALKSFMAECQALRNIRHRNLVKIITACSTSDF-QGNYFRALV 601 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~-~~~~~~~lv 601 (771)
....+|+|.+|.||+|++..+++.||||++... .......+.+|++++++++||||+++++++..... ......++|
T Consensus 19 ~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv 98 (342)
T cd07879 19 SLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQDFYLV 98 (342)
T ss_pred EEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCceEEEE
Confidence 445689999999999999888889999998643 22334678899999999999999999999865432 111246899
Q ss_pred EEeccCCCCCCC-cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCc
Q 041479 602 YEFMHHGSLESC-PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSN 680 (771)
Q Consensus 602 ~e~~~~g~L~~~-~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 680 (771)
+||+.. ++... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+|++|||+++.....
T Consensus 99 ~e~~~~-~l~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~~---- 170 (342)
T cd07879 99 MPYMQT-DLQKIMGHPLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNLAVNEDCELKILDFGLARHADAE---- 170 (342)
T ss_pred eccccc-CHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCCCCcCCCCC----
Confidence 999964 66544 33688999999999999999999986 8999999999999999999999999998754321
Q ss_pred ccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHh----------------
Q 041479 681 QCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKM---------------- 728 (771)
Q Consensus 681 ~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~---------------- 728 (771)
.....|++.|+||| +||++|||++|+.||.+..... .+......
T Consensus 171 ---~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 246 (342)
T cd07879 171 ---MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQILKVTGVPGPEFVQKLEDKA 246 (342)
T ss_pred ---CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCCHHHHHHhcccc
Confidence 12345788999999 6999999999999996421100 01110000
Q ss_pred ------hCC----Cch---hhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 729 ------ALP----DQI---LQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 729 ------~~~----~~~---~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
..+ ... ....++.+.....+||+.||++||++.+++.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~ 296 (342)
T cd07879 247 AKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALE 296 (342)
T ss_pred hHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 000 000 1123344445666999999999999999984
No 371
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.94 E-value=7.4e-27 Score=245.15 Aligned_cols=229 Identities=23% Similarity=0.266 Sum_probs=179.0
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeecc---chhhHHHHHHHHHHHhccC-CCCceeEEEEeecCCCCCceeEEEE
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLH---QRGALKSFMAECQALRNIR-HRNLVKIITACSTSDFQGNYFRALV 601 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~~~~~~lv 601 (771)
...+|+|.+|.||+|+.+.+++.||+|++... .....+.+.+|++++++++ ||||+++++++...+ ..++|
T Consensus 6 ~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~-----~~~lv 80 (280)
T cd05581 6 GKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEE-----NLYFV 80 (280)
T ss_pred eeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCc-----eEEEE
Confidence 44689999999999999988889999998643 2334567889999999998 999999999887665 68999
Q ss_pred EEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccC
Q 041479 602 YEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMS 678 (771)
Q Consensus 602 ~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 678 (771)
|||+++++|.++ ...+++..+..++.|++.||+|||+. +++|+||||+||+++.++.++++|||++........
T Consensus 81 ~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~ 157 (280)
T cd05581 81 LEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSS 157 (280)
T ss_pred EcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEecCCccccccCCccc
Confidence 999999999776 33689999999999999999999985 899999999999999999999999999986543221
Q ss_pred Cc----------------ccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHH
Q 041479 679 SN----------------QCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVK 727 (771)
Q Consensus 679 ~~----------------~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~ 727 (771)
.. ........|+..|+||| +|++++|+++|+.||.... ....+....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~-~~~~~~~~~- 235 (280)
T cd05581 158 PESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSN-EYLTFQKIL- 235 (280)
T ss_pred cccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCcc-HHHHHHHHH-
Confidence 10 01222345788999999 6999999999999997532 111111111
Q ss_pred hhCCCchhhhcCccccccCcccChhchhhcCCH----HHHHH
Q 041479 728 MALPDQILQVLDPLFLVGGVQEGEETAEENIKK----GQIRE 765 (771)
Q Consensus 728 ~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~----~~vl~ 765 (771)
......+..+++.+.....+||..+|++|||+ .++++
T Consensus 236 -~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 236 -KLEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred -hcCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 11222333445566666779999999999999 77764
No 372
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.94 E-value=9.2e-27 Score=244.92 Aligned_cols=225 Identities=23% Similarity=0.278 Sum_probs=173.1
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeeccch--hhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEe
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLHQR--GALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEF 604 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~ 604 (771)
..+|+|.+|.||+|....+++.||+|.+..... .....+.+|++++++++||||+++++++...+ ..++||||
T Consensus 5 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-----~~~~v~e~ 79 (283)
T cd05118 5 GKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKG-----DLYLVFEF 79 (283)
T ss_pred eeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCC-----CEEEEEec
Confidence 357899999999999988888999999865432 34578889999999999999999999987765 68999999
Q ss_pred ccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCc
Q 041479 605 MHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSN 680 (771)
Q Consensus 605 ~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 680 (771)
+++ ++.+. ...+++.++..++.|++.|++|||+. +|+|+||||+||+++.++.+||+|||.+........
T Consensus 80 ~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~-- 153 (283)
T cd05118 80 MDT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPENLLINTEGVLKLADFGLARSFGSPVR-- 153 (283)
T ss_pred cCC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcc--
Confidence 975 66554 23678999999999999999999986 899999999999999999999999999976654321
Q ss_pred ccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHh----------------
Q 041479 681 QCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKM---------------- 728 (771)
Q Consensus 681 ~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~---------------- 728 (771)
......++..|+||| +|+++|+++||+.||......+. +......
T Consensus 154 --~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 230 (283)
T cd05118 154 --PYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQ-LFKIFRTLGTPDPEVWPKFTSLA 230 (283)
T ss_pred --cccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHcCCCchHhcccchhhh
Confidence 111235788899999 69999999999999864321110 1010000
Q ss_pred -----hCC-------CchhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 729 -----ALP-------DQILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 729 -----~~~-------~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
..+ ....+.++..+.....+||.+||.+||++.+++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 231 RNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred hhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 000 0111223445556667999999999999999985
No 373
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.94 E-value=5.8e-27 Score=253.66 Aligned_cols=231 Identities=21% Similarity=0.236 Sum_probs=173.6
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeecc--chhhHHHHHHHHHHHhccCCCCceeEEEEeecCCC-CCceeEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLH--QRGALKSFMAECQALRNIRHRNLVKIITACSTSDF-QGNYFRA 599 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~-~~~~~~~ 599 (771)
+.....+|+|.+|+||+|++..+++.||||++... .....+.+.+|+.++++++||||+++++++...+. ......+
T Consensus 17 y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 96 (343)
T cd07851 17 YQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDFQDVY 96 (343)
T ss_pred eEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccccccEE
Confidence 33456689999999999999988889999998643 23344678899999999999999999987765442 1122479
Q ss_pred EEEEeccCCCCCCC--cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCccc
Q 041479 600 LVYEFMHHGSLESC--PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVM 677 (771)
Q Consensus 600 lv~e~~~~g~L~~~--~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~ 677 (771)
+|+||+ +++|.+. ...+++.++..++.|+++|++|||+. +|+||||||+||+++.++.+||+|||++......
T Consensus 97 lv~e~~-~~~L~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~- 171 (343)
T cd07851 97 LVTHLM-GADLNNIVKCQKLSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVNEDCELKILDFGLARHTDDE- 171 (343)
T ss_pred EEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEcccccccccccc-
Confidence 999999 5688665 34689999999999999999999985 8999999999999999999999999999865332
Q ss_pred CCcccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhh------------
Q 041479 678 SSNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMA------------ 729 (771)
Q Consensus 678 ~~~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~------------ 729 (771)
.....++..|+||| +||++||+++|+.||.+..... .+.......
T Consensus 172 ------~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~ 244 (343)
T cd07851 172 ------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHID-QLKRIMNLVGTPDEELLQKIS 244 (343)
T ss_pred ------ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHhcCCCCHHHHhhcc
Confidence 12235788999999 5999999999999996432110 011111000
Q ss_pred ----------CC----C---chhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 730 ----------LP----D---QILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 730 ----------~~----~---~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
.+ . ......++.+.....+|+..||++|||+.+|++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~ 297 (343)
T cd07851 245 SESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA 297 (343)
T ss_pred chhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence 00 0 001122444445666999999999999999975
No 374
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.94 E-value=2.2e-26 Score=242.53 Aligned_cols=229 Identities=22% Similarity=0.276 Sum_probs=169.0
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhcc---CCCCceeEEEEeecCCCCCceeEEEE
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNI---RHRNLVKIITACSTSDFQGNYFRALV 601 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l---~H~nIv~l~~~~~~~~~~~~~~~~lv 601 (771)
..+|+|.+|.||+|+++.+++.||||++.... ......+.+|+.+++++ +||||+++++++...+..+....+++
T Consensus 5 ~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~l~ 84 (287)
T cd07838 5 AEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELKLTLV 84 (287)
T ss_pred EEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCceeEEE
Confidence 45789999999999999888899999996432 22345677788877666 59999999999987663333348999
Q ss_pred EEeccCCCCCCC-----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcc
Q 041479 602 YEFMHHGSLESC-----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676 (771)
Q Consensus 602 ~e~~~~g~L~~~-----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~ 676 (771)
|||+.+ +|.++ ...+++.++..++.|++.||+|||+. +++|+|+||+||+++.++.+|++|||++......
T Consensus 85 ~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~~ 160 (287)
T cd07838 85 FEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNILVTSDGQVKIADFGLARIYSFE 160 (287)
T ss_pred ehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhEEEccCCCEEEeccCcceeccCC
Confidence 999974 66543 23588999999999999999999985 8999999999999999999999999999765432
Q ss_pred cCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhh------------
Q 041479 677 MSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMA------------ 729 (771)
Q Consensus 677 ~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~------------ 729 (771)
.. .....++..|+||| |||++|||++|+.||.+... ...+..+....
T Consensus 161 ~~-----~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 234 (287)
T cd07838 161 MA-----LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSE-ADQLDKIFDVIGLPSEEEWPRNV 234 (287)
T ss_pred cc-----cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCCh-HHHHHHHHHHcCCCChHhcCCCc
Confidence 21 12234788999999 69999999999999865321 11122221110
Q ss_pred ------CCC-------chhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 730 ------LPD-------QILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 730 ------~~~-------~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
++. .....+++.+.....+||+.||++||++.++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 235 SLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred ccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 000 000111223334455999999999999999975
No 375
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.94 E-value=8.8e-27 Score=248.68 Aligned_cols=238 Identities=21% Similarity=0.234 Sum_probs=171.9
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCC---CCcee
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDF---QGNYF 597 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~---~~~~~ 597 (771)
+.....+|+|.+|.||+|+++.+++.||||++.... ......+.+|++++++++||||+++++++.+... .....
T Consensus 10 y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 89 (311)
T cd07866 10 YEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRKRGS 89 (311)
T ss_pred EEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheecccccccccCce
Confidence 334456899999999999999888899999986543 2223567899999999999999999998765431 11235
Q ss_pred EEEEEEeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCcccc
Q 041479 598 RALVYEFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673 (771)
Q Consensus 598 ~~lv~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~ 673 (771)
.++||||+.+ ++... ...+++.++..++.|+++||+|||+. +|+||||||+||++++++.+|++|||+++..
T Consensus 90 ~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 165 (311)
T cd07866 90 VYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILIDNQGILKIADFGLARPY 165 (311)
T ss_pred EEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECcCccchhc
Confidence 7999999975 44332 34689999999999999999999985 8999999999999999999999999999865
Q ss_pred CcccCCc-------ccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhh-
Q 041479 674 PEVMSSN-------QCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMA- 729 (771)
Q Consensus 674 ~~~~~~~-------~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~- 729 (771)
....... ........|++.|+||| +||++|||++|+.||.+..... ....+....
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~-~~~~~~~~~~ 244 (311)
T cd07866 166 DGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDID-QLHLIFKLCG 244 (311)
T ss_pred cCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhC
Confidence 4322111 11122346788999999 6999999999999986432111 011111000
Q ss_pred -C-----------------------CCchh---hhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 730 -L-----------------------PDQIL---QVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 730 -~-----------------------~~~~~---~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
. +.... ....+.+.+...+|++.||++|||+.|++.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 245 TPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred CCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 0 00000 111223334556999999999999999875
No 376
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.94 E-value=7.1e-27 Score=251.76 Aligned_cols=234 Identities=20% Similarity=0.185 Sum_probs=174.5
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEe
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEF 604 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~ 604 (771)
..+|.|.+|.||+|+...+++.||||++.... ....+.+.+|+.+++.++||||+++++++...+..+....|+||||
T Consensus 6 ~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~lv~e~ 85 (330)
T cd07834 6 KPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYIVTEL 85 (330)
T ss_pred eeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceEEEecc
Confidence 45799999999999998888899999996543 3455789999999999999999999999876542222357999999
Q ss_pred ccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCcc
Q 041479 605 MHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQ 681 (771)
Q Consensus 605 ~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 681 (771)
+++ +|.+. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++++|||++......... .
T Consensus 86 ~~~-~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~-~ 160 (330)
T cd07834 86 MET-DLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSA---NVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDE-K 160 (330)
T ss_pred hhh-hHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccCceEeecccccc-c
Confidence 984 66554 23688999999999999999999985 8999999999999999999999999999865443210 0
Q ss_pred cccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCc----------------------cHH
Q 041479 682 CSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGL----------------------DLH 723 (771)
Q Consensus 682 ~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~----------------------~~~ 723 (771)
.......+++.|+||| +|+++|+|++|+.||.+...... ...
T Consensus 161 ~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 240 (330)
T cd07834 161 GFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKAR 240 (330)
T ss_pred ccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccchh
Confidence 1122345788999999 69999999999999964321100 000
Q ss_pred HHHHhhCC---Cc---hhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 724 NFVKMALP---DQ---ILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 724 ~~~~~~~~---~~---~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
.++..... .. ....+++.+.....+||+++|++|||+.++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~ 288 (330)
T cd07834 241 NYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALA 288 (330)
T ss_pred hHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHh
Confidence 01110000 00 01112333445566999999999999999986
No 377
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.94 E-value=9.1e-27 Score=238.37 Aligned_cols=202 Identities=21% Similarity=0.096 Sum_probs=157.8
Q ss_pred cccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEeccCCCCC
Q 041479 532 LVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLE 611 (771)
Q Consensus 532 ~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~~~~g~L~ 611 (771)
|.+|.||+++++.+++.||+|++.... .+.+|...+....||||+++++++.+.+ ..++||||+++|+|.
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~-----~~~lv~e~~~~~~L~ 73 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSED-----SVFLVLQHAEGGKLW 73 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCC-----eEEEEEecCCCCCHH
Confidence 778999999999999999999996543 2334555556667999999999987765 789999999999997
Q ss_pred CC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCccccccccc
Q 041479 612 SC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLK 688 (771)
Q Consensus 612 ~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~ 688 (771)
+. ...+++..+..++.|++.||+|+|+. +|+||||||+||+++.++.++++|||.+....... .+..
T Consensus 74 ~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~-------~~~~ 143 (237)
T cd05576 74 SHISKFLNIPEECVKRWAAEMVVALDALHRE---GIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSC-------DGEA 143 (237)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEecccchhcccccc-------ccCC
Confidence 65 23588999999999999999999985 89999999999999999999999999886543321 1234
Q ss_pred ccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCccccccCcccChhc
Q 041479 689 GTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFLVGGVQEGEET 753 (771)
Q Consensus 689 gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~ 753 (771)
++..|+||| +|+++||+++|+.|+....... ........+..+++.+.....+|++.|
T Consensus 144 ~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~li~~~l~~d 216 (237)
T cd05576 144 VENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGI-------NTHTTLNIPEWVSEEARSLLQQLLQFN 216 (237)
T ss_pred cCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhc-------ccccccCCcccCCHHHHHHHHHHccCC
Confidence 577899999 6999999999998875321110 000111233345555656667999999
Q ss_pred hhhcCCH
Q 041479 754 AEENIKK 760 (771)
Q Consensus 754 p~~Rpt~ 760 (771)
|++||++
T Consensus 217 p~~R~~~ 223 (237)
T cd05576 217 PTERLGA 223 (237)
T ss_pred HHHhcCC
Confidence 9999997
No 378
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.94 E-value=3.7e-27 Score=259.35 Aligned_cols=235 Identities=20% Similarity=0.183 Sum_probs=187.2
Q ss_pred cccccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhcc-CCCCceeEEEEeecCCCCCceeEEE
Q 041479 522 DLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNI-RHRNLVKIITACSTSDFQGNYFRAL 600 (771)
Q Consensus 522 ~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~~~~l 600 (771)
.++.-.+.|.|.+|.||+++.+..++.+|||++..... ..++...|.++++.. .|||++.++|++.-.+......+|+
T Consensus 20 ~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d-~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWL 98 (953)
T KOG0587|consen 20 IFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTED-EEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWL 98 (953)
T ss_pred ccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcc-ccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEEE
Confidence 34555678899999999999999999999999976543 336677899999887 5999999999997665555568999
Q ss_pred EEEeccCCCCCCC-----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCc
Q 041479 601 VYEFMHHGSLESC-----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPE 675 (771)
Q Consensus 601 v~e~~~~g~L~~~-----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~ 675 (771)
|||||.+|+..++ ..++.|..+..|+.+++.|+.+||.. .++|||||-.|||+..++.+|++|||++..+..
T Consensus 99 VMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~n---kviHRDikG~NiLLT~e~~VKLvDFGvSaQlds 175 (953)
T KOG0587|consen 99 VMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNN---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDS 175 (953)
T ss_pred EeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhc---ceeeecccCceEEEeccCcEEEeeeeeeeeeec
Confidence 9999999998766 56788999999999999999999986 899999999999999999999999999987654
Q ss_pred ccCCcccccccccccccccchh--------------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCC-Cch
Q 041479 676 VMSSNQCSSVGLKGTVGYATPE--------------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALP-DQI 734 (771)
Q Consensus 676 ~~~~~~~~~~~~~gt~~y~aPE--------------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~-~~~ 734 (771)
.. ....+.+|||.||||| +|++..||..|.+|+.|+.+.-. +..+-+...| -.-
T Consensus 176 T~----grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmra-LF~IpRNPPPkLkr 250 (953)
T KOG0587|consen 176 TV----GRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRA-LFLIPRNPPPKLKR 250 (953)
T ss_pred cc----ccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhh-hccCCCCCCccccc
Confidence 32 2334568999999999 69999999999999988765322 1111111111 112
Q ss_pred hhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 735 LQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 735 ~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
++.....+.+.+..|+.+|-.+||++.++++
T Consensus 251 p~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 251 PKKWSKKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred hhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence 3444455556677999999999999998875
No 379
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.94 E-value=1.1e-26 Score=244.52 Aligned_cols=224 Identities=21% Similarity=0.219 Sum_probs=168.9
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeeccch-hhHHHHHHHHHHHhccC-CCCceeEEEEeecCCCCCceeEEEEEEe
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLHQR-GALKSFMAECQALRNIR-HRNLVKIITACSTSDFQGNYFRALVYEF 604 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~~~~~~lv~e~ 604 (771)
..+|+|.+|+||+|+...+++.||||++..... .......+|+..+++++ ||||+++++++...+ ..++||||
T Consensus 5 ~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~-----~~~lv~e~ 79 (283)
T cd07830 5 KQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFREND-----ELYFVFEY 79 (283)
T ss_pred eeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCC-----cEEEEEec
Confidence 457999999999999998888999999864422 22334567999999999 999999999987755 78999999
Q ss_pred ccCCCCCCC-----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCC
Q 041479 605 MHHGSLESC-----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSS 679 (771)
Q Consensus 605 ~~~g~L~~~-----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 679 (771)
+ +|++.+. ...+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++|+|||+++.......
T Consensus 80 ~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~- 154 (283)
T cd07830 80 M-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPP- 154 (283)
T ss_pred C-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCCEEEeecccceeccCCCC-
Confidence 9 7788654 13678999999999999999999985 899999999999999999999999999986543221
Q ss_pred cccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHH------------HHHh---
Q 041479 680 NQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHN------------FVKM--- 728 (771)
Q Consensus 680 ~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~------------~~~~--- 728 (771)
.....|+..|+||| ||+++||+++|+.||......+ ...+ |...
T Consensus 155 ----~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 229 (283)
T cd07830 155 ----YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEID-QLYKICSVLGTPTKQDWPEGYKL 229 (283)
T ss_pred ----cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHH-HHHHHHHhcCCCChhhhhhHhhh
Confidence 12235788999999 6999999999999885421100 0100 0000
Q ss_pred ------hCC----Cchhh---hcCccccccCcccChhchhhcCCHHHHHH
Q 041479 729 ------ALP----DQILQ---VLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 729 ------~~~----~~~~~---~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
..+ ....+ ..+..+.....+||+.+|++|||+.|++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 230 ASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred hccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence 000 00011 11233445566999999999999999975
No 380
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.94 E-value=1.3e-26 Score=240.63 Aligned_cols=225 Identities=19% Similarity=0.170 Sum_probs=171.7
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeecc-----chhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEE
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLH-----QRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRAL 600 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~-----~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~l 600 (771)
...+|+|.+|+||++++...+..+++|+++.. ......++.+|+.++++++||||+++++++.+.. ..++
T Consensus 5 ~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~l 79 (260)
T cd08222 5 QQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERD-----AFCI 79 (260)
T ss_pred eeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCC-----ceEE
Confidence 34589999999999998877666777766432 1233456778999999999999999999987665 6799
Q ss_pred EEEeccCCCCCCC-------cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCcccc
Q 041479 601 VYEFMHHGSLESC-------PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673 (771)
Q Consensus 601 v~e~~~~g~L~~~-------~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~ 673 (771)
||||+++++|... ...+++.++..++.|++.|+.|||+. +++|+|+||+||++++ +.+|++|||+++..
T Consensus 80 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~~l~~~nili~~-~~~~l~d~g~~~~~ 155 (260)
T cd08222 80 ITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQR---RILHRDLKAKNIFLKN-NLLKIGDFGVSRLL 155 (260)
T ss_pred EEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc---CccccCCChhheEeec-CCEeecccCceeec
Confidence 9999999998654 34588999999999999999999985 9999999999999975 56999999998765
Q ss_pred CcccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhc
Q 041479 674 PEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVL 738 (771)
Q Consensus 674 ~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 738 (771)
..... ......|++.|+||| +|+++|++++|..||.+... ...............+..+
T Consensus 156 ~~~~~----~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 229 (260)
T cd08222 156 MGSCD----LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNF--LSVVLRIVEGPTPSLPETY 229 (260)
T ss_pred CCCcc----cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccH--HHHHHHHHcCCCCCCcchh
Confidence 43221 122345788999999 69999999999999864211 1111111112223334445
Q ss_pred CccccccCcccChhchhhcCCHHHHHH
Q 041479 739 DPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 739 ~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
+..+...+.+||..+|++||++.|+++
T Consensus 230 ~~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 230 SRQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred cHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 556666677999999999999999986
No 381
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=99.94 E-value=9.3e-28 Score=234.53 Aligned_cols=181 Identities=23% Similarity=0.283 Sum_probs=146.8
Q ss_pred ccccccccccccceEEEEEecCCC----eEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCce
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQ----TFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNY 596 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~----~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~ 596 (771)
+.....+|+|.+|.||||+-+++. +.+|+|+++..+ .+......+|+.+++.++|||||.|..++.+.+.
T Consensus 26 ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~---- 101 (438)
T KOG0666|consen 26 YEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDK---- 101 (438)
T ss_pred hhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCc----
Confidence 445566899999999999766553 379999996553 3455778999999999999999999999877432
Q ss_pred eEEEEEEeccCCCCCCC--------cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCC----CceEE
Q 041479 597 FRALVYEFMHHGSLESC--------PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDND----MTAHM 664 (771)
Q Consensus 597 ~~~lv~e~~~~g~L~~~--------~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~----~~~kl 664 (771)
..++++||++. ||.+. .+.++...+..|..|++.|+.|||+. =|+|||+||+|||+..+ |.+||
T Consensus 102 ~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDLKPaNIlvmgdgperG~VKI 177 (438)
T KOG0666|consen 102 KVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN---WVLHRDLKPANILVMGDGPERGRVKI 177 (438)
T ss_pred eEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh---heeeccCCcceEEEeccCCccCeeEe
Confidence 78999999987 65433 34678888999999999999999996 69999999999999776 89999
Q ss_pred ecccCccccCcccCCcccccccccccccccchh----------------HHHHHHHHHhCCCCC
Q 041479 665 GDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPT 712 (771)
Q Consensus 665 ~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~ 712 (771)
+|||+||.+...... ......++-|.+|+||| .||++.||+|-++-|
T Consensus 178 aDlGlaR~~~~plkp-l~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF 240 (438)
T KOG0666|consen 178 ADLGLARLFNNPLKP-LASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLF 240 (438)
T ss_pred ecccHHHHhhccccc-cccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccc
Confidence 999999987654321 22344567899999999 499999999987654
No 382
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.94 E-value=3.6e-26 Score=266.67 Aligned_cols=139 Identities=27% Similarity=0.366 Sum_probs=123.0
Q ss_pred ccccccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEE
Q 041479 525 LNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALV 601 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv 601 (771)
....+|.|.+|+||+|++..+++.||||++.... ....+.+.+|+.+++.++||||+++++++...+ ..|+|
T Consensus 8 i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~-----~~~lV 82 (669)
T cd05610 8 IVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSAN-----NVYLV 82 (669)
T ss_pred EEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECC-----EEEEE
Confidence 3456899999999999999888899999996442 334578899999999999999999999887766 78999
Q ss_pred EEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCcc
Q 041479 602 YEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTR 671 (771)
Q Consensus 602 ~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~ 671 (771)
|||+.+++|.++ ...+++..+..|+.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++
T Consensus 83 mEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 83 MEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred EeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 999999999776 34578888999999999999999985 89999999999999999999999999986
No 383
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.94 E-value=4.1e-26 Score=245.27 Aligned_cols=225 Identities=21% Similarity=0.219 Sum_probs=169.3
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeecc--chhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEE
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLH--QRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYE 603 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e 603 (771)
...+|.|.+|.||+|..+.+++.||||++... .....+.+.+|++++++++||||+++++++..... ..|+|||
T Consensus 15 ~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~----~~~lv~e 90 (328)
T cd07856 15 LQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLE----DIYFVTE 90 (328)
T ss_pred EEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCC----cEEEEee
Confidence 45679999999999999988999999988542 22345778899999999999999999999865331 5789999
Q ss_pred eccCCCCCCC--cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCcc
Q 041479 604 FMHHGSLESC--PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQ 681 (771)
Q Consensus 604 ~~~~g~L~~~--~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 681 (771)
|+ +++|.+. ...+++.....++.|+++||+|||+. +|+||||||+||++++++.+|++|||.++......
T Consensus 91 ~~-~~~L~~~~~~~~~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~~---- 162 (328)
T cd07856 91 LL-GTDLHRLLTSRPLEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPSNILINENCDLKICDFGLARIQDPQM---- 162 (328)
T ss_pred hh-ccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEeECCCCCEEeCccccccccCCCc----
Confidence 99 5577655 24577888889999999999999985 89999999999999999999999999987543211
Q ss_pred cccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCc--cHH--------HHHHh-------
Q 041479 682 CSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGL--DLH--------NFVKM------- 728 (771)
Q Consensus 682 ~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~--~~~--------~~~~~------- 728 (771)
.+..+++.|+||| +||++||+++|+.||........ .+. ++...
T Consensus 163 ---~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (328)
T cd07856 163 ---TGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTL 239 (328)
T ss_pred ---CCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhH
Confidence 2235788899999 69999999999999864321000 000 00000
Q ss_pred ----hC----CCch---hhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 729 ----AL----PDQI---LQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 729 ----~~----~~~~---~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
.. +... ...+++.+...+.+|++.+|++|||+.+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~ 287 (328)
T cd07856 240 RFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALA 287 (328)
T ss_pred HHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 00 0011 1123444555667999999999999999975
No 384
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.94 E-value=1.5e-26 Score=261.68 Aligned_cols=177 Identities=20% Similarity=0.243 Sum_probs=132.8
Q ss_pred ccccccccccccceEEEEEecCCCe-EEEEEE--------------ee---ccchhhHHHHHHHHHHHhccCCCCceeEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQT-FIAVKV--------------LF---LHQRGALKSFMAECQALRNIRHRNLVKII 584 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~-~vAvK~--------------~~---~~~~~~~~~~~~E~~~l~~l~H~nIv~l~ 584 (771)
+.....+|+|.+|+||++..+.... .+++|. +. .........+.+|++++++++|||||+++
T Consensus 150 Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~ 229 (501)
T PHA03210 150 FRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENILKIE 229 (501)
T ss_pred cEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcCcEe
Confidence 3344568999999999987654321 122221 10 01122346788999999999999999999
Q ss_pred EEeecCCCCCceeEEEEEEeccCCCCCCC--------cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeee
Q 041479 585 TACSTSDFQGNYFRALVYEFMHHGSLESC--------PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLL 656 (771)
Q Consensus 585 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~--------~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl 656 (771)
+++...+ ..|+|+|++.+ ++..+ .......+...++.|++.||+|||+. +|+||||||+|||+
T Consensus 230 ~~~~~~~-----~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~---gIiHrDLKP~NILl 300 (501)
T PHA03210 230 EILRSEA-----NTYMITQKYDF-DLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRDIKLENIFL 300 (501)
T ss_pred EEEEECC-----eeEEEEecccc-CHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEE
Confidence 9998776 67999999854 44332 11223456778999999999999985 99999999999999
Q ss_pred CCCCceEEecccCccccCcccCCcccccccccccccccchh---------------HHHHHHHHHhCCCC
Q 041479 657 DNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRP 711 (771)
Q Consensus 657 ~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P 711 (771)
+.++.+||+|||+++.+..... ....+.+||+.|+||| +||++|||++|..+
T Consensus 301 ~~~~~vkL~DFGla~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~ 367 (501)
T PHA03210 301 NCDGKIVLGDFGTAMPFEKERE---AFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFC 367 (501)
T ss_pred CCCCCEEEEeCCCceecCcccc---cccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCC
Confidence 9999999999999986643221 1223457999999999 69999999998754
No 385
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.94 E-value=5.5e-26 Score=246.14 Aligned_cols=229 Identities=21% Similarity=0.217 Sum_probs=170.3
Q ss_pred ccccccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCC-CCceeEEEE
Q 041479 525 LNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDF-QGNYFRALV 601 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~-~~~~~~~lv 601 (771)
....+|+|.+|.||+|....+++.||||++.... ....+.+.+|++++++++||||+++++++..... ......|++
T Consensus 21 ~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv 100 (345)
T cd07877 21 NLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLV 100 (345)
T ss_pred EEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecccccccccEEEE
Confidence 3456899999999999998888899999996432 2334678899999999999999999998864321 111246788
Q ss_pred EEeccCCCCCCC--cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCC
Q 041479 602 YEFMHHGSLESC--PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSS 679 (771)
Q Consensus 602 ~e~~~~g~L~~~--~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 679 (771)
+|++ +++|.+. ...+++..+..++.|+++|++|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 101 ~~~~-~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~~~--- 173 (345)
T cd07877 101 THLM-GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE--- 173 (345)
T ss_pred ehhc-ccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEcCCCCEEEeccccccccccc---
Confidence 8887 6788654 34588999999999999999999986 8999999999999999999999999998754321
Q ss_pred cccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhh----------CCC-
Q 041479 680 NQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMA----------LPD- 732 (771)
Q Consensus 680 ~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~----------~~~- 732 (771)
.....|+..|+||| +||++||+++|+.||....... .+....... .+.
T Consensus 174 ----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 248 (345)
T cd07877 174 ----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID-QLKLILRLVGTPGAELLKKISSE 248 (345)
T ss_pred ----ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHHHhhcccH
Confidence 12345788999999 6999999999999985421111 011111100 000
Q ss_pred ---------------c---hhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 733 ---------------Q---ILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 733 ---------------~---~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
. .....++.+.....+|++.||++|||+.++++
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 299 (345)
T cd07877 249 SARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 299 (345)
T ss_pred hHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhc
Confidence 0 00112334445566999999999999999885
No 386
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.94 E-value=1.7e-26 Score=242.83 Aligned_cols=225 Identities=25% Similarity=0.302 Sum_probs=171.6
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEe
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEF 604 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~ 604 (771)
..+|+|.+|.||+|+...+++.||+|++.... ....+.+..|++++++++||||+++++++.+.+ ..++||||
T Consensus 5 ~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~-----~~~~v~e~ 79 (282)
T cd07829 5 EKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTER-----KLYLVFEY 79 (282)
T ss_pred hcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCC-----ceEEEecC
Confidence 34788999999999999988899999997653 344577889999999999999999999987765 68999999
Q ss_pred ccCCCCCCCc----ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCc
Q 041479 605 MHHGSLESCP----RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSN 680 (771)
Q Consensus 605 ~~~g~L~~~~----~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 680 (771)
++ ++|.++. ..+++..+..++.|++.||+|||+. +|+||||+|+||++++++.+||+|||+++.......
T Consensus 80 ~~-~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~-- 153 (282)
T cd07829 80 CD-MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR-- 153 (282)
T ss_pred cC-cCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEEEcCCCCEEEecCCcccccCCCcc--
Confidence 97 5786651 3688999999999999999999986 899999999999999999999999999986543221
Q ss_pred ccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHH------------------
Q 041479 681 QCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFV------------------ 726 (771)
Q Consensus 681 ~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~------------------ 726 (771)
......++..|+||| +||++||+++|+.||......+ .+....
T Consensus 154 --~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 230 (282)
T cd07829 154 --TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEID-QLFKIFQILGTPTEESWPGVTKLP 230 (282)
T ss_pred --ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHH-HHHHHHHHhCCCcHHHHHhhcccc
Confidence 111234577899999 6999999999999985421100 000000
Q ss_pred --HhhCCC-------chhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 727 --KMALPD-------QILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 727 --~~~~~~-------~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
....+. ......+..+.....+||..||++||++.+++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 231 DYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred cccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 000010 000112334445566999999999999999975
No 387
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=99.93 E-value=3.3e-26 Score=247.03 Aligned_cols=171 Identities=26% Similarity=0.342 Sum_probs=144.7
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccC-C-----CCceeEEEEeecCCCCCceeEE
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIR-H-----RNLVKIITACSTSDFQGNYFRA 599 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-H-----~nIv~l~~~~~~~~~~~~~~~~ 599 (771)
...+|.|.||.|.||.+..+++.||||+++.. .....+...|+.+|..++ | -|+|++++|+...+ +.|
T Consensus 191 ~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~-k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~-----Hlc 264 (586)
T KOG0667|consen 191 LEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK-KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRN-----HLC 264 (586)
T ss_pred EEEecccccceeEEEEecCCCcEEEEEeeccC-hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccccc-----cee
Confidence 45689999999999999999999999999644 345567788999999997 4 39999999998887 889
Q ss_pred EEEEeccCCCCCCC-----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCC--CCceEEecccCccc
Q 041479 600 LVYEFMHHGSLESC-----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN--DMTAHMGDFGLTRF 672 (771)
Q Consensus 600 lv~e~~~~g~L~~~-----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~--~~~~kl~DfGla~~ 672 (771)
||+|.++ -+|.++ ...++...+..++.||+.||.+||+. +|||+||||+||||.+ ...+||+|||.|.+
T Consensus 265 iVfELL~-~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l---~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~ 340 (586)
T KOG0667|consen 265 IVFELLS-TNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHEL---GIIHCDLKPENILLKDPKRSRIKVIDFGSSCF 340 (586)
T ss_pred eeehhhh-hhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCChhheeeccCCcCceeEEecccccc
Confidence 9999985 478766 34588899999999999999999985 9999999999999975 34799999999987
Q ss_pred cCcccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCC
Q 041479 673 IPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTS 713 (771)
Q Consensus 673 ~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~ 713 (771)
...... ..+=++.|+||| ||||++||++|.+-|.
T Consensus 341 ~~q~vy-------tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfp 389 (586)
T KOG0667|consen 341 ESQRVY-------TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFP 389 (586)
T ss_pred cCCcce-------eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccC
Confidence 655432 234578999999 7999999999987664
No 388
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.93 E-value=3.9e-27 Score=237.64 Aligned_cols=179 Identities=24% Similarity=0.290 Sum_probs=152.2
Q ss_pred ccccccccccceEEEEEecCCCeEEEEEEeecc---chhhHHHHHHHHHHHhcc-CCCCceeEEEEeecCCCCCceeEEE
Q 041479 525 LNVSYESLVKATVYKGILDLDQTFIAVKVLFLH---QRGALKSFMAECQALRNI-RHRNLVKIITACSTSDFQGNYFRAL 600 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~~~~l 600 (771)
-...+|.|++|.|..|..+.+.+.||||+++.. +.++.+--+.|-++++-- +-|.+|.++.++.+.+ .+|+
T Consensus 353 Fl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmD-----RLyF 427 (683)
T KOG0696|consen 353 FLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMD-----RLYF 427 (683)
T ss_pred eEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhh-----heee
Confidence 345689999999999999999999999999654 345667778888888876 5789999999887777 7899
Q ss_pred EEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCccc
Q 041479 601 VYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVM 677 (771)
Q Consensus 601 v~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~ 677 (771)
||||+.||+|-.. ...+.+..++.++.+||-||-|||+. +|++||||.+|||+|.+|++||+|||+++.---
T Consensus 428 VMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~k---gIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~-- 502 (683)
T KOG0696|consen 428 VMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIF-- 502 (683)
T ss_pred EEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcC---CeeeeeccccceEeccCCceEeeeccccccccc--
Confidence 9999999999544 34678888999999999999999985 999999999999999999999999999983211
Q ss_pred CCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCcc
Q 041479 678 SSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDM 715 (771)
Q Consensus 678 ~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~ 715 (771)
......++||||.|+||| |||++|||+.|+.||++.
T Consensus 503 --~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGe 553 (683)
T KOG0696|consen 503 --DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGE 553 (683)
T ss_pred --CCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCC
Confidence 122344689999999999 799999999999999763
No 389
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.93 E-value=7.8e-27 Score=262.46 Aligned_cols=183 Identities=23% Similarity=0.246 Sum_probs=158.4
Q ss_pred cccccccccccccccceEEEEEecCCCeEEEEEEeecc---chhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCce
Q 041479 520 RKDLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLH---QRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNY 596 (771)
Q Consensus 520 ~~~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~ 596 (771)
..++.....+|.|+||.|..++++.+++.||+|++... .......|+.|-++|.--+.+.||.++.+|.+..
T Consensus 74 ~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~----- 148 (1317)
T KOG0612|consen 74 AEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDER----- 148 (1317)
T ss_pred HHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCcc-----
Confidence 34566667789999999999999999999999999654 2445678999999999999999999998866655
Q ss_pred eEEEEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCcccc
Q 041479 597 FRALVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673 (771)
Q Consensus 597 ~~~lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~ 673 (771)
+.|+|||||+||||-.. ..++++.-+..|..+|.-||.-+|+. |+|||||||+|||+|.+|++|++|||.+-.+
T Consensus 149 ~LYlVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLld~~GHikLADFGsClkm 225 (1317)
T KOG0612|consen 149 YLYLVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLLDKSGHIKLADFGSCLKM 225 (1317)
T ss_pred ceEEEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEecccCcEeeccchhHHhc
Confidence 89999999999998655 22678888899999999999999986 9999999999999999999999999999877
Q ss_pred CcccCCcccccccccccccccchh--------------------HHHHHHHHHhCCCCCC
Q 041479 674 PEVMSSNQCSSVGLKGTVGYATPE--------------------YGILLLEIFTGKRPTS 713 (771)
Q Consensus 674 ~~~~~~~~~~~~~~~gt~~y~aPE--------------------~Gv~l~el~tg~~P~~ 713 (771)
...+. ......+|||-|++|| +||++|||+.|..||.
T Consensus 226 ~~dG~---V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFY 282 (1317)
T KOG0612|consen 226 DADGT---VRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFY 282 (1317)
T ss_pred CCCCc---EEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcch
Confidence 65543 2334568999999999 5999999999999994
No 390
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.93 E-value=3.1e-26 Score=211.81 Aligned_cols=181 Identities=23% Similarity=0.261 Sum_probs=150.7
Q ss_pred ccccccccccccccceEEEEEecCCCeEEEEEEeeccc-hhhHHHHHHHHHHHhcc-CCCCceeEEEEeecCCCCCceeE
Q 041479 521 KDLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ-RGALKSFMAECQALRNI-RHRNLVKIITACSTSDFQGNYFR 598 (771)
Q Consensus 521 ~~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~~~ 598 (771)
.+...-..+|.|++|.|-+-++...|+..|||++...- .+..++.++|+++..+. .+|.+|.++|.+.... ..
T Consensus 46 d~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~reg-----dv 120 (282)
T KOG0984|consen 46 DDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREG-----DV 120 (282)
T ss_pred hhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccc-----cE
Confidence 34455667899999999999999999999999997653 34457888999986665 6999999999887766 67
Q ss_pred EEEEEeccCCCCCCC-------cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCcc
Q 041479 599 ALVYEFMHHGSLESC-------PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTR 671 (771)
Q Consensus 599 ~lv~e~~~~g~L~~~-------~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~ 671 (771)
++.||.|.. +|..+ ....++.-.-+|+.-|..||.|||++ ..|+|||+||+|||++.+|++|+||||++.
T Consensus 121 wIcME~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~k--L~vIHRDvKPsNiLIn~~GqVKiCDFGIsG 197 (282)
T KOG0984|consen 121 WICMELMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSK--LSVIHRDVKPSNILINYDGQVKICDFGISG 197 (282)
T ss_pred EEeHHHhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHH--hhhhhccCCcceEEEccCCcEEEcccccce
Confidence 999999964 66554 45678888899999999999999996 689999999999999999999999999998
Q ss_pred ccCcccCCcccccccccccccccchh-------------------HHHHHHHHHhCCCCCCc
Q 041479 672 FIPEVMSSNQCSSVGLKGTVGYATPE-------------------YGILLLEIFTGKRPTSD 714 (771)
Q Consensus 672 ~~~~~~~~~~~~~~~~~gt~~y~aPE-------------------~Gv~l~el~tg~~P~~~ 714 (771)
.+.+.... +-..|...||||| +|+++.||++++.||+.
T Consensus 198 ~L~dSiAk-----t~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~ 254 (282)
T KOG0984|consen 198 YLVDSIAK-----TMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYES 254 (282)
T ss_pred eehhhhHH-----HHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccc
Confidence 76554321 1134778899999 69999999999999965
No 391
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.93 E-value=1.4e-25 Score=229.63 Aligned_cols=219 Identities=27% Similarity=0.314 Sum_probs=174.1
Q ss_pred ccceEEEEEecCCCeEEEEEEeeccchhh-HHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEeccCCCCC
Q 041479 533 VKATVYKGILDLDQTFIAVKVLFLHQRGA-LKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLE 611 (771)
Q Consensus 533 ~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~-~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~~~~g~L~ 611 (771)
++|.||+|++..+++.||+|++....... .+.+.+|++.+++++|+||+++++++.... ..+++|||+++++|.
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~-----~~~l~~e~~~~~~L~ 75 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDED-----KLYLVMEYCDGGDLF 75 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCC-----EEEEEEeCCCCCCHH
Confidence 36899999999878899999997655433 689999999999999999999999988765 679999999999997
Q ss_pred CCc---ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCccccccccc
Q 041479 612 SCP---RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLK 688 (771)
Q Consensus 612 ~~~---~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~ 688 (771)
.+. ..+++..+..++.+++.|+.|||+. +|+|+|++|+||+++.++.++++|||.+....... ......
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~-----~~~~~~ 147 (244)
T smart00220 76 DLLKKRGRLSEDEARFYARQILSALEYLHSN---GIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG-----LLTTFV 147 (244)
T ss_pred HHHHhccCCCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHHeEECCCCcEEEccccceeeecccc-----cccccc
Confidence 762 2278899999999999999999986 99999999999999999999999999998665432 122345
Q ss_pred ccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhh--cCccccccCcccCh
Q 041479 689 GTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQV--LDPLFLVGGVQEGE 751 (771)
Q Consensus 689 gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~cl~ 751 (771)
|+..|++|| +|+++||+++|..||.... ......+............. ++..+.....+|+.
T Consensus 148 ~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 226 (244)
T smart00220 148 GTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDD-QLLELFKKIGKPKPPFPPPEWKISPEAKDLIRKLLV 226 (244)
T ss_pred CCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-cHHHHHHHHhccCCCCccccccCCHHHHHHHHHHcc
Confidence 788999999 6999999999999986521 12223333332222211111 44555566779999
Q ss_pred hchhhcCCHHHHHH
Q 041479 752 ETAEENIKKGQIRE 765 (771)
Q Consensus 752 ~~p~~Rpt~~~vl~ 765 (771)
.+|++||++.++++
T Consensus 227 ~~p~~Rp~~~~~~~ 240 (244)
T smart00220 227 KDPEKRLTAEEALQ 240 (244)
T ss_pred CCchhccCHHHHhh
Confidence 99999999999986
No 392
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.93 E-value=4.1e-26 Score=244.99 Aligned_cols=221 Identities=20% Similarity=0.146 Sum_probs=174.6
Q ss_pred cccccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhcc-CCCCceeEEEEeecCCCCCceeEEE
Q 041479 522 DLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNI-RHRNLVKIITACSTSDFQGNYFRAL 600 (771)
Q Consensus 522 ~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~~~~l 600 (771)
.......+|.|+++.|-++.+..+++..|||++.... .+-.+|+.++... +||||+++.+.+.+.- ..|+
T Consensus 323 ~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v~~~~~-----~~~~ 393 (612)
T KOG0603|consen 323 SYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDVYEDGK-----EIYL 393 (612)
T ss_pred hhccccccCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeecceecCCc-----eeee
Confidence 3445566899999999999999999999999996542 2344577676666 5999999999987765 7899
Q ss_pred EEEeccCCCCCCCc--ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeee-CCCCceEEecccCccccCccc
Q 041479 601 VYEFMHHGSLESCP--RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLL-DNDMTAHMGDFGLTRFIPEVM 677 (771)
Q Consensus 601 v~e~~~~g~L~~~~--~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl-~~~~~~kl~DfGla~~~~~~~ 677 (771)
|||++.+|.+.+.. .+....++..|+.+++.|+.|||.+ ||||||+||+|||+ ++.+.++|+|||.++.....
T Consensus 394 v~e~l~g~ell~ri~~~~~~~~e~~~w~~~lv~Av~~LH~~---gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~- 469 (612)
T KOG0603|consen 394 VMELLDGGELLRRIRSKPEFCSEASQWAAELVSAVDYLHEQ---GVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS- 469 (612)
T ss_pred eehhccccHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhc---CeeecCCChhheeecCCCCcEEEEEechhhhCchh-
Confidence 99999998875542 2222256778999999999999996 99999999999999 58899999999999866543
Q ss_pred CCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCccc
Q 041479 678 SSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLF 742 (771)
Q Consensus 678 ~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 742 (771)
..+.+-|..|.||| ||+++|+|++|+.||.... .+ .+......+......++..-
T Consensus 470 ------~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P-~~---~ei~~~i~~~~~s~~vS~~A 539 (612)
T KOG0603|consen 470 ------CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHP-AG---IEIHTRIQMPKFSECVSDEA 539 (612)
T ss_pred ------hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCC-ch---HHHHHhhcCCccccccCHHH
Confidence 22345688999999 7999999999999996532 22 33333334444456666666
Q ss_pred cccCcccChhchhhcCCHHHHHH
Q 041479 743 LVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 743 ~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
+....+|++.||.+||+|.++..
T Consensus 540 KdLl~~LL~~dP~~Rl~~~~i~~ 562 (612)
T KOG0603|consen 540 KDLLQQLLQVDPALRLGADEIGA 562 (612)
T ss_pred HHHHHHhccCChhhCcChhhhcc
Confidence 67777999999999999999864
No 393
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.93 E-value=6e-26 Score=230.88 Aligned_cols=234 Identities=22% Similarity=0.236 Sum_probs=176.2
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeeccc-------hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeE
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ-------RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFR 598 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~-------~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 598 (771)
.--+|.|+|+.||||.+-...+.||||+-.... +...+...+|.+|.+.+.||.||++|+|+.-+.. .+
T Consensus 468 LhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtd----sF 543 (775)
T KOG1151|consen 468 LHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTD----SF 543 (775)
T ss_pred HHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccc----cc
Confidence 345799999999999998888899999875432 2334677899999999999999999999864432 56
Q ss_pred EEEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeC---CCCceEEecccCccc
Q 041479 599 ALVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD---NDMTAHMGDFGLTRF 672 (771)
Q Consensus 599 ~lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~---~~~~~kl~DfGla~~ 672 (771)
|-|+|||+|.+|+-+ .+.+++.++..|+.||+.||.||.+. +++|||-|+||.|||+. ..|.+||+|||+++.
T Consensus 544 CTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKI 622 (775)
T KOG1151|consen 544 CTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKI 622 (775)
T ss_pred eeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEeeecchhhh
Confidence 999999999999766 45688999999999999999999985 78999999999999995 468899999999998
Q ss_pred cCcccCCc---ccccccccccccccchh-------------------HHHHHHHHHhCCCCCCccccCCccHHHHH---H
Q 041479 673 IPEVMSSN---QCSSVGLKGTVGYATPE-------------------YGILLLEIFTGKRPTSDMFTEGLDLHNFV---K 727 (771)
Q Consensus 673 ~~~~~~~~---~~~~~~~~gt~~y~aPE-------------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~---~ 727 (771)
+.+..... ........||.+|.+|| .||++|..+.|++||.........+.+-. .
T Consensus 623 MdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTIlkA 702 (775)
T KOG1151|consen 623 MDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTILKA 702 (775)
T ss_pred ccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhchhcc
Confidence 86543221 11223457999999999 49999999999999964332221122111 1
Q ss_pred hhCCCchhhhcCccccccCcccChhchhhcCCHHHHH
Q 041479 728 MALPDQILQVLDPLFLVGGVQEGEETAEENIKKGQIR 764 (771)
Q Consensus 728 ~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl 764 (771)
..+..+....+.+.-...+.+|++.--++|.++.++.
T Consensus 703 tEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA 739 (775)
T KOG1151|consen 703 TEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLA 739 (775)
T ss_pred eeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHc
Confidence 1112233344455554555688887777777666553
No 394
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.92 E-value=1.8e-26 Score=252.83 Aligned_cols=219 Identities=23% Similarity=0.283 Sum_probs=160.2
Q ss_pred ccccccce-EEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccC-CCCceeEEEEeecCCCCCceeEEEEEEecc
Q 041479 529 YESLVKAT-VYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIR-HRNLVKIITACSTSDFQGNYFRALVYEFMH 606 (771)
Q Consensus 529 l~~~~~~~-Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~~~~~~lv~e~~~ 606 (771)
+|.|..|+ ||+|... ++.||||++-.+ ...-..+||..++.-+ |||||++++.-.+.. +.||+.|.|.
T Consensus 517 lG~Gs~Gt~Vf~G~ye--~R~VAVKrll~e---~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~q-----F~YIalELC~ 586 (903)
T KOG1027|consen 517 LGYGSNGTVVFRGVYE--GREVAVKRLLEE---FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQ-----FLYIALELCA 586 (903)
T ss_pred cccCCCCcEEEEEeeC--CceehHHHHhhH---hHHHHHHHHHHHHhccCCCceEEEEeeccCCc-----eEEEEehHhh
Confidence 45666666 8999985 558999998533 3345678999999985 999999987644444 7899999996
Q ss_pred CCCCCCCccc-------CCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCC---C--CceEEecccCccccC
Q 041479 607 HGSLESCPRI-------LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN---D--MTAHMGDFGLTRFIP 674 (771)
Q Consensus 607 ~g~L~~~~~~-------l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~---~--~~~kl~DfGla~~~~ 674 (771)
. +|+++.+. ......+.+..|++.||++||+- +||||||||.||||+. + .+++|+|||+++.+.
T Consensus 587 ~-sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl---~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~ 662 (903)
T KOG1027|consen 587 C-SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSL---KIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLA 662 (903)
T ss_pred h-hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhc---ccccccCCCceEEEEccCCCcceeEEecccccccccC
Confidence 4 77665221 11133467789999999999994 9999999999999975 3 479999999999887
Q ss_pred cccCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCC-Cchhhh
Q 041479 675 EVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALP-DQILQV 737 (771)
Q Consensus 675 ~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~ 737 (771)
.....-.. ..+..||-+|+||| +||++|+.++ |..||.+.+..... ++.+... ......
T Consensus 663 ~~~sS~~r-~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~N---Il~~~~~L~~L~~~ 738 (903)
T KOG1027|consen 663 GGKSSFSR-LSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQAN---ILTGNYTLVHLEPL 738 (903)
T ss_pred CCcchhhc-ccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhh---hhcCccceeeeccC
Confidence 66544333 55667999999999 6999999999 59999876544322 2222222 111222
Q ss_pred cCccccccCcccChhchhhcCCHHHHHH
Q 041479 738 LDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 738 ~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
.|..-.+.+.+|+.++|..||++.+|+.
T Consensus 739 ~d~eA~dLI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 739 PDCEAKDLISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred chHHHHHHHHHhcCCCcccCCCHHHHhC
Confidence 2222234556999999999999999974
No 395
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.92 E-value=2.6e-25 Score=223.52 Aligned_cols=230 Identities=20% Similarity=0.241 Sum_probs=182.4
Q ss_pred ccccccceEEEEEecCCC-----eEEEEEEeecc-chhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEE
Q 041479 529 YESLVKATVYKGILDLDQ-----TFIAVKVLFLH-QRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 529 l~~~~~~~Vy~~~~~~~~-----~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
+.||.||.||+|.|++.. +.|-||.++.+ ++-+...++.|...+..+.|||+..+.+++.+... .++.+|
T Consensus 292 lqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~----~P~V~y 367 (563)
T KOG1024|consen 292 LQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYA----TPFVLY 367 (563)
T ss_pred hhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccC----cceEEE
Confidence 578999999999887653 35667766443 34456789999999999999999999999976542 678999
Q ss_pred EeccCCCCCCC-----------cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCcc
Q 041479 603 EFMHHGSLESC-----------PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTR 671 (771)
Q Consensus 603 e~~~~g~L~~~-----------~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~ 671 (771)
.++.-|+|..+ .+.+...+.+.++.|++.|++|||.. +|||.||.++|.+||+.-.+|++|-.++|
T Consensus 368 ~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~---~ViHkDiAaRNCvIdd~LqVkltDsaLSR 444 (563)
T KOG1024|consen 368 PATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHKDIAARNCVIDDQLQVKLTDSALSR 444 (563)
T ss_pred eccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc---CcccchhhhhcceehhheeEEeccchhcc
Confidence 99999998766 23466778899999999999999986 99999999999999999999999999999
Q ss_pred ccCcccCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchh
Q 041479 672 FIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQIL 735 (771)
Q Consensus 672 ~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~ 735 (771)
.+-+.+. .+-..+.-....||+|| |||++|||+| |+.||.++-+.+ ...+.+.+++-..+
T Consensus 445 DLFP~DY--hcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfE--m~~ylkdGyRlaQP 520 (563)
T KOG1024|consen 445 DLFPGDY--HCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFE--MEHYLKDGYRLAQP 520 (563)
T ss_pred ccCcccc--cccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHH--HHHHHhccceecCC
Confidence 7765443 33334444578899999 8999999999 999998874433 44555555543333
Q ss_pred hhcCccccccCcccChhchhhcCCHHHHHHHHHH
Q 041479 736 QVLDPLFLVGGVQEGEETAEENIKKGQIRESLIA 769 (771)
Q Consensus 736 ~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~ 769 (771)
-.+..++..++.-||+.+|++||+..+++..|.+
T Consensus 521 ~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLse 554 (563)
T KOG1024|consen 521 FNCPDELFTVMACCWALLPEERPSFSQLVICLSE 554 (563)
T ss_pred CCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHH
Confidence 3333444456669999999999999999999876
No 396
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.92 E-value=2e-25 Score=219.76 Aligned_cols=224 Identities=21% Similarity=0.214 Sum_probs=168.7
Q ss_pred ccccccccccccccceEEEEEecCCCeEEEEEEeecc---chhhHHHHHHHHHHHhcc-CCCCceeEEEEeecCCCCCce
Q 041479 521 KDLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLH---QRGALKSFMAECQALRNI-RHRNLVKIITACSTSDFQGNY 596 (771)
Q Consensus 521 ~~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~ 596 (771)
+++...-.+|.|++|.|..++++.+.+.||+|+++.+ ...+..-...|-.+..+. +||.+|.+..++.+..
T Consensus 250 ~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtes----- 324 (593)
T KOG0695|consen 250 QDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTES----- 324 (593)
T ss_pred ccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccc-----
Confidence 4444455679999999999999999999999999654 223344556677777776 6999999999877666
Q ss_pred eEEEEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCcccc
Q 041479 597 FRALVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673 (771)
Q Consensus 597 ~~~lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~ 673 (771)
..++|.||++||+|--+ .+.+++..+..+..+|+.||.|||+. ||+.||+|.+|||+|..|.+|++|||+++.-
T Consensus 325 rlffvieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~r---giiyrdlkldnvlldaeghikltdygmcke~ 401 (593)
T KOG0695|consen 325 RLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYGMCKEG 401 (593)
T ss_pred eEEEEEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhc---CeeeeeccccceEEccCCceeecccchhhcC
Confidence 78999999999999543 56799999999999999999999985 9999999999999999999999999999842
Q ss_pred CcccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCcc-------ccCCccHHHHHHhhCC
Q 041479 674 PEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDM-------FTEGLDLHNFVKMALP 731 (771)
Q Consensus 674 ~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~-------~~~~~~~~~~~~~~~~ 731 (771)
-.. .....++||||.|+||| +||+++||+.|+.||+-. ..++..+..+....++
T Consensus 402 l~~----gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqir 477 (593)
T KOG0695|consen 402 LGP----GDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIR 477 (593)
T ss_pred CCC----CcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhccc
Confidence 111 22334689999999999 699999999999999621 1112222233333332
Q ss_pred CchhhhcCccccccCcccChhchhhcC
Q 041479 732 DQILQVLDPLFLVGGVQEGEETAEENI 758 (771)
Q Consensus 732 ~~~~~~~~~~~~~~~~~cl~~~p~~Rp 758 (771)
++..++-.-..+...-+.+||.+|.
T Consensus 478 --iprslsvkas~vlkgflnkdp~erl 502 (593)
T KOG0695|consen 478 --IPRSLSVKASHVLKGFLNKDPKERL 502 (593)
T ss_pred --ccceeehhhHHHHHHhhcCCcHHhc
Confidence 2222222222333366788999885
No 397
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.92 E-value=2.3e-25 Score=235.64 Aligned_cols=188 Identities=21% Similarity=0.247 Sum_probs=155.0
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRA 599 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 599 (771)
+..-.++|-|.||.|..++-.++...||+|.++..+ +.+......|-+||..-..+.||+||..|.+.+ .+|
T Consensus 631 Fvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkd-----nLY 705 (1034)
T KOG0608|consen 631 FVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKD-----NLY 705 (1034)
T ss_pred eEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCC-----ceE
Confidence 344567999999999999988888899999996554 344567788999999999999999999877766 789
Q ss_pred EEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcc
Q 041479 600 LVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676 (771)
Q Consensus 600 lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~ 676 (771)
+||||++|||+-.+ ...+++.-+..++.++.+|+++.|.. |+|||||||+|||||.+|++|++|||++.-+...
T Consensus 706 FVMdYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkm---GFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWT 782 (1034)
T KOG0608|consen 706 FVMDYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT 782 (1034)
T ss_pred EEEeccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhc---cceecccCccceEEccCCceeeeeccccccceec
Confidence 99999999998665 45677888889999999999999985 9999999999999999999999999998643211
Q ss_pred cC--------------------------------------Ccccccccccccccccchh---------------HHHHHH
Q 041479 677 MS--------------------------------------SNQCSSVGLKGTVGYATPE---------------YGILLL 703 (771)
Q Consensus 677 ~~--------------------------------------~~~~~~~~~~gt~~y~aPE---------------~Gv~l~ 703 (771)
.. +..+.....+||+.|+||| .||++|
T Consensus 783 HdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~ 862 (1034)
T KOG0608|consen 783 HDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILY 862 (1034)
T ss_pred cccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHH
Confidence 00 0011223567999999999 399999
Q ss_pred HHHhCCCCCCccccC
Q 041479 704 EIFTGKRPTSDMFTE 718 (771)
Q Consensus 704 el~tg~~P~~~~~~~ 718 (771)
||+.|+.||-+....
T Consensus 863 em~~g~~pf~~~tp~ 877 (1034)
T KOG0608|consen 863 EMLVGQPPFLADTPG 877 (1034)
T ss_pred HHhhCCCCccCCCCC
Confidence 999999999764443
No 398
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.92 E-value=6.1e-25 Score=249.94 Aligned_cols=235 Identities=17% Similarity=0.139 Sum_probs=149.9
Q ss_pred ccccccccccccccceEEEEEecCC----CeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCC-CCCc
Q 041479 521 KDLLLNVSYESLVKATVYKGILDLD----QTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSD-FQGN 595 (771)
Q Consensus 521 ~~~~~~~~l~~~~~~~Vy~~~~~~~----~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~-~~~~ 595 (771)
..+.....+|+|.+|+||+|++..+ +..||||++..... .+.+..| .+....+.+++.+...+.... ....
T Consensus 132 ~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~--~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~~~ 207 (566)
T PLN03225 132 DDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA--VEIWMNE--RVRRACPNSCADFVYGFLEPVSSKKE 207 (566)
T ss_pred CCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch--hHHHHHH--HHHhhchhhHHHHHHhhhcccccccC
Confidence 3445556799999999999999988 78999998854322 1222221 112222333333222211110 0112
Q ss_pred eeEEEEEEeccCCCCCCCcc--c---------------------CCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCC
Q 041479 596 YFRALVYEFMHHGSLESCPR--I---------------------LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPS 652 (771)
Q Consensus 596 ~~~~lv~e~~~~g~L~~~~~--~---------------------l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~ 652 (771)
...++||||+++++|.++.. . .....+..++.|++.||+|||+. +|+||||||+
T Consensus 208 ~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiHRDLKP~ 284 (566)
T PLN03225 208 DEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVHRDVKPQ 284 (566)
T ss_pred CceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEeCcCCHH
Confidence 26799999999999865411 0 01223457899999999999985 8999999999
Q ss_pred CeeeCC-CCceEEecccCccccCcccCCcccccccccccccccchh----------------------------------
Q 041479 653 NVLLDN-DMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------------------------- 697 (771)
Q Consensus 653 NILl~~-~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------------------------- 697 (771)
|||++. ++.+||+|||+|+.+..... .......||+.|||||
T Consensus 285 NILl~~~~~~~KL~DFGlA~~l~~~~~---~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~D 361 (566)
T PLN03225 285 NIIFSEGSGSFKIIDLGAAADLRVGIN---YIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFD 361 (566)
T ss_pred HEEEeCCCCcEEEEeCCCccccccccc---cCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcc
Confidence 999985 57999999999986543221 1223457899999999
Q ss_pred ---HHHHHHHHHhCCCCCCccc--------cCCccHHHHHHhhCCC---ch---hhhcCcc---ccccCcccChhchhhc
Q 041479 698 ---YGILLLEIFTGKRPTSDMF--------TEGLDLHNFVKMALPD---QI---LQVLDPL---FLVGGVQEGEETAEEN 757 (771)
Q Consensus 698 ---~Gv~l~el~tg~~P~~~~~--------~~~~~~~~~~~~~~~~---~~---~~~~~~~---~~~~~~~cl~~~p~~R 757 (771)
+||++|||+++..|+++.. ..+.....|.....+. .. .+..|.. ......+|++.||++|
T Consensus 362 VwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR 441 (566)
T PLN03225 362 IYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQR 441 (566)
T ss_pred cHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcccC
Confidence 4999999999877764321 1122233333221111 11 1111111 1134559999999999
Q ss_pred CCHHHHHH
Q 041479 758 IKKGQIRE 765 (771)
Q Consensus 758 pt~~~vl~ 765 (771)
||+.++++
T Consensus 442 ~ta~e~L~ 449 (566)
T PLN03225 442 ISAKAALA 449 (566)
T ss_pred CCHHHHhC
Confidence 99999986
No 399
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.92 E-value=1.4e-26 Score=239.49 Aligned_cols=224 Identities=21% Similarity=0.222 Sum_probs=173.8
Q ss_pred ccccccccccccccceEEEEEecCCCeEEEEEEeecc---chhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCcee
Q 041479 521 KDLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLH---QRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYF 597 (771)
Q Consensus 521 ~~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 597 (771)
.+....-++|-|+||.|-..........+|+|+++.. +.++.+....|-++|...+.|.||++|.-|.+.. +
T Consensus 420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~k-----y 494 (732)
T KOG0614|consen 420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSK-----Y 494 (732)
T ss_pred hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccch-----h
Confidence 4455667899999999998888776656899988543 3556678889999999999999999998877766 7
Q ss_pred EEEEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccC
Q 041479 598 RALVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIP 674 (771)
Q Consensus 598 ~~lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~ 674 (771)
.|+.||-|-||.+... ...++......|+..+.+|++|||+. +||+||+||+|.++|.+|.+|+.|||+|+.+.
T Consensus 495 vYmLmEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k---~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~ 571 (732)
T KOG0614|consen 495 VYMLMEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRK---GIIYRDLKPENLLLDNRGYLKLVDFGFAKKIG 571 (732)
T ss_pred hhhhHHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhc---CceeccCChhheeeccCCceEEeehhhHHHhc
Confidence 8999999999999776 45688888999999999999999985 99999999999999999999999999999876
Q ss_pred cccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCC-Cchhhhc
Q 041479 675 EVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALP-DQILQVL 738 (771)
Q Consensus 675 ~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 738 (771)
... ...++||||-|.||| +|+++||+++|.+||++.-+ +..+...-.++. -.++..+
T Consensus 572 ~g~-----KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dp--mktYn~ILkGid~i~~Pr~I 644 (732)
T KOG0614|consen 572 SGR-----KTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDP--MKTYNLILKGIDKIEFPRRI 644 (732)
T ss_pred cCC-----ceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCch--HHHHHHHHhhhhhhhccccc
Confidence 543 234689999999999 69999999999999986432 222222222211 2222233
Q ss_pred CccccccCcccChhchhhcCC
Q 041479 739 DPLFLVGGVQEGEETAEENIK 759 (771)
Q Consensus 739 ~~~~~~~~~~cl~~~p~~Rpt 759 (771)
...-...+.+.+..+|++|.-
T Consensus 645 ~k~a~~Lik~LCr~~P~ERLG 665 (732)
T KOG0614|consen 645 TKTATDLIKKLCRDNPTERLG 665 (732)
T ss_pred chhHHHHHHHHHhcCcHhhhc
Confidence 322223333555678888863
No 400
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.92 E-value=3.2e-26 Score=244.43 Aligned_cols=234 Identities=23% Similarity=0.261 Sum_probs=179.5
Q ss_pred ccccccccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeE
Q 041479 519 SRKDLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFR 598 (771)
Q Consensus 519 ~~~~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 598 (771)
+..+++..+.+|+|.+|.|||++++..++..|||+++....+..+-...|+-+++..+|||||.++|.|...+ ..
T Consensus 13 P~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~d-----kl 87 (829)
T KOG0576|consen 13 PQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRD-----KL 87 (829)
T ss_pred CccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhc-----Cc
Confidence 4456777888999999999999999999999999999887777788889999999999999999999987776 67
Q ss_pred EEEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCc
Q 041479 599 ALVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPE 675 (771)
Q Consensus 599 ~lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~ 675 (771)
+++||||.+|+|++. ..++++.++..++++..+|+.|+|++ +=+|||||-.||++.+.|.+|++|||.+..+..
T Consensus 88 wicMEycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~---gk~hRdiKGanilltd~gDvklaDfgvsaqita 164 (829)
T KOG0576|consen 88 WICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANILLTDEGDVKLADFGVSAQITA 164 (829)
T ss_pred EEEEEecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcC---CcccccccccceeecccCceeecccCchhhhhh
Confidence 999999999999887 55788999999999999999999996 779999999999999999999999999876654
Q ss_pred ccCCcccccccccccccccchhH------------------HHHHHHHHhCCCCCCccccCCccHHHHHHhhC-CCc--h
Q 041479 676 VMSSNQCSSVGLKGTVGYATPEY------------------GILLLEIFTGKRPTSDMFTEGLDLHNFVKMAL-PDQ--I 734 (771)
Q Consensus 676 ~~~~~~~~~~~~~gt~~y~aPE~------------------Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~-~~~--~ 734 (771)
.. .....+.||++|||||. |++..|+..-+.|.-|..+... +.-+.+..+ |+. -
T Consensus 165 ti----~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~-l~LmTkS~~qpp~lkD 239 (829)
T KOG0576|consen 165 TI----AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRA-LFLMTKSGFQPPTLKD 239 (829)
T ss_pred hh----hhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHH-HHHhhccCCCCCcccC
Confidence 33 23445789999999992 4444444444444333221111 111111111 111 1
Q ss_pred hhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 735 LQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 735 ~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
.....+.+......|+.++|.+|||+..+++
T Consensus 240 k~kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 240 KTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred CccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 1222333345566999999999999887654
No 401
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.92 E-value=2.9e-25 Score=208.28 Aligned_cols=177 Identities=21% Similarity=0.301 Sum_probs=152.7
Q ss_pred cccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccC-CCCceeEEEEeecCCCCCceeEEEEE
Q 041479 524 LLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIR-HRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 524 ~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
...-.+|.|.++.||.|..-.+.+.++||+++.-. .+...+|+.++..++ |||||+++++..++... .+.+|+
T Consensus 41 eivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk---kkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Sk---tpaLiF 114 (338)
T KOG0668|consen 41 EIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK---KKKIKREIKILQNLRGGPNIIKLLDIVKDPESK---TPSLIF 114 (338)
T ss_pred HHHHHHcCccHhhHhcccccCCCceEEEeeechHH---HHHHHHHHHHHHhccCCCCeeehhhhhcCcccc---CchhHh
Confidence 34456899999999999988888899999996544 367889999999997 99999999998776533 567999
Q ss_pred EeccCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCC-CCceEEecccCccccCcccCCcc
Q 041479 603 EFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN-DMTAHMGDFGLTRFIPEVMSSNQ 681 (771)
Q Consensus 603 e~~~~g~L~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~-~~~~kl~DfGla~~~~~~~~~~~ 681 (771)
||+.+.+..+....++..++..++.+++.||.|+|++ ||+|||+||.|+++|. ..+++++|+|+|.++.+....+.
T Consensus 115 E~v~n~Dfk~ly~tl~d~dIryY~~elLkALdyCHS~---GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~eYnV 191 (338)
T KOG0668|consen 115 EYVNNTDFKQLYPTLTDYDIRYYIYELLKALDYCHSM---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNV 191 (338)
T ss_pred hhhccccHHHHhhhhchhhHHHHHHHHHHHHhHHHhc---CcccccCCcceeeechhhceeeeeecchHhhcCCCceeee
Confidence 9999988887777788889999999999999999996 9999999999999995 45799999999999877665443
Q ss_pred cccccccccccccchh----------------HHHHHHHHHhCCCCCCc
Q 041479 682 CSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSD 714 (771)
Q Consensus 682 ~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~ 714 (771)
.+.+.+|.-|| |||++.+|+..+.||-.
T Consensus 192 -----RVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFh 235 (338)
T KOG0668|consen 192 -----RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFH 235 (338)
T ss_pred -----eeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccC
Confidence 35688899999 69999999999999954
No 402
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.91 E-value=4.2e-27 Score=237.18 Aligned_cols=286 Identities=19% Similarity=0.159 Sum_probs=162.4
Q ss_pred eeeecCCC---------CcEEEEEcCCCCCcccCCccccCCCCCcEEEcCCCcccccCCccccCCCCCCEEeccc-CcCc
Q 041479 36 GVTCSLKY---------QRVILLNLSGQNLTGTASPYIGNLTFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNS-NALQ 105 (771)
Q Consensus 36 ~v~c~~~~---------~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~-N~l~ 105 (771)
-|.|..+. ...+.++|..|.|+.+++.+|+.+++|++||||+|+|+.+-|++|.++.+|.+|-+-+ |+|+
T Consensus 50 ~VdCr~~GL~eVP~~LP~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~ 129 (498)
T KOG4237|consen 50 IVDCRGKGLTEVPANLPPETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKIT 129 (498)
T ss_pred eEEccCCCcccCcccCCCcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchh
Confidence 37887553 4678899999999988888999999999999999999999999999999998887766 7866
Q ss_pred ccCCcccccCCcccccCCccccCCCCCCEEecccccCcCCCCccceeeecccccccccCccccCCCCCCEEecccCcCcc
Q 041479 106 GQIPDSRLILNKLEGNIPSELGSLLKFKGLGLANNYFTGPIPHLNMFQVSVYSLTGSIPIQLLNITSMEYFHVSENQLVG 185 (771)
Q Consensus 106 ~~~p~~~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g 185 (771)
..-...|++|..|+-|.+.-|++.. .....|..+++|..|.+-+|.+.
T Consensus 130 --------------~l~k~~F~gL~slqrLllNan~i~C-----------------ir~~al~dL~~l~lLslyDn~~q- 177 (498)
T KOG4237|consen 130 --------------DLPKGAFGGLSSLQRLLLNANHINC-----------------IRQDALRDLPSLSLLSLYDNKIQ- 177 (498)
T ss_pred --------------hhhhhHhhhHHHHHHHhcChhhhcc-----------------hhHHHHHHhhhcchhcccchhhh-
Confidence 2333468888888888888888873 22233444444444444444444
Q ss_pred cCChhhhhCCCCCcEEEeecCc------------ccccCCccccCCCCCCEEEccccccCCCCCcCcccccCCCCCcEEE
Q 041479 186 ELPPHIGFTLPNVRILLLAGNQ------------FFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEVVS 253 (771)
Q Consensus 186 ~lp~~~~~~l~~L~~L~L~~N~------------l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~ 253 (771)
.++...+..+.+++.+.+..|. +....|..+++..-..-..+.++++....+..|. ..+..+..-.
T Consensus 178 ~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsgarc~~p~rl~~~Ri~q~~a~kf~--c~~esl~s~~ 255 (498)
T KOG4237|consen 178 SICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSGARCVSPYRLYYKRINQEDARKFL--CSLESLPSRL 255 (498)
T ss_pred hhccccccchhccchHhhhcCccccccccchhhhHHhhchhhcccceecchHHHHHHHhcccchhhhh--hhHHhHHHhh
Confidence 4444334444444444444444 2223334444444444555555555544443331 0011111101
Q ss_pred ccCccccccCChhhhhcccccceeecccCcCcccCcccccccCCcceEecCCccceeccCccccCCCCCCEEEccCCccc
Q 041479 254 LSVNSLSGTLPNSLANFSSHLRYLYMSANPISGSIPTEIGNLKNLIIIAIEKFILIRNIPISVGYLLKLQVLSLFENNIS 333 (771)
Q Consensus 254 Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 333 (771)
.+....-+..|..-+.-.++|+.|+|++|+|+++-+.+|.++..++.|+|..|++...-...|.++..|+.|+|.+|+|+
T Consensus 256 ~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it 335 (498)
T KOG4237|consen 256 SSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQIT 335 (498)
T ss_pred ccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeE
Confidence 11111222333322222224555555555555555555555555555555555554444444555555555555555555
Q ss_pred ccCCcccccccccccccccCcc
Q 041479 334 REIPSSLGNFTFLTELNLCGNS 355 (771)
Q Consensus 334 ~~~p~~~~~l~~L~~L~Ls~N~ 355 (771)
...|.+|..+.+|.+|+|-.|.
T Consensus 336 ~~~~~aF~~~~~l~~l~l~~Np 357 (498)
T KOG4237|consen 336 TVAPGAFQTLFSLSTLNLLSNP 357 (498)
T ss_pred EEecccccccceeeeeehccCc
Confidence 5555555555555555554444
No 403
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.91 E-value=2.7e-24 Score=246.03 Aligned_cols=262 Identities=27% Similarity=0.326 Sum_probs=143.0
Q ss_pred EEEEEcCCCCCcccCCccccCCCCCcEEEcCCCcccccCCccccCCCCCCEEecccCcCcccCCcccccCCcccccCCcc
Q 041479 46 VILLNLSGQNLTGTASPYIGNLTFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNALQGQIPDSRLILNKLEGNIPSE 125 (771)
Q Consensus 46 l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~l~~n~l~~~~p~~ 125 (771)
-..|+|++|+|+ .+|+.+. ++|+.|++++|+|+. +|.. .++|++|+|++|+|+ .+|..
T Consensus 203 ~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt~-LP~l---p~~Lk~LdLs~N~Lt---------------sLP~l 260 (788)
T PRK15387 203 NAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTS-LPAL---PPELRTLEVSGNQLT---------------SLPVL 260 (788)
T ss_pred CcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCCC-CCCC---CCCCcEEEecCCccC---------------cccCc
Confidence 445677777777 4555554 367777777777774 5532 456677777777665 22321
Q ss_pred ccCCCCCCEEecccccCcCCCCccceeeecccccccccCccccCCCCCCEEecccCcCcccCChhhhhCCCCCcEEEeec
Q 041479 126 LGSLLKFKGLGLANNYFTGPIPHLNMFQVSVYSLTGSIPIQLLNITSMEYFHVSENQLVGELPPHIGFTLPNVRILLLAG 205 (771)
Q Consensus 126 ~~~l~~L~~L~Ls~N~l~~~lp~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~ 205 (771)
.++|+.|++++|.|+ .+|.. .++|+.|++++|+++ .+|. .+++|+.|+|++
T Consensus 261 ---p~sL~~L~Ls~N~L~------------------~Lp~l---p~~L~~L~Ls~N~Lt-~LP~----~p~~L~~LdLS~ 311 (788)
T PRK15387 261 ---PPGLLELSIFSNPLT------------------HLPAL---PSGLCKLWIFGNQLT-SLPV----LPPGLQELSVSD 311 (788)
T ss_pred ---ccccceeeccCCchh------------------hhhhc---hhhcCEEECcCCccc-cccc----cccccceeECCC
Confidence 235556666666554 12221 134556666666666 5553 234566666666
Q ss_pred CcccccCCccccCCCCCCEEEccccccCCCCCcCcccccCCCCCcEEEccCccccccCChhhhhcccccceeecccCcCc
Q 041479 206 NQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSLSGTLPNSLANFSSHLRYLYMSANPIS 285 (771)
Q Consensus 206 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~ 285 (771)
|+|++ +|... .+|+.|++++|+|+++ |.. ..+|+.|+|++|+|+ .+|.. +++|+.|++++|+|+
T Consensus 312 N~L~~-Lp~lp---~~L~~L~Ls~N~L~~L-P~l------p~~Lq~LdLS~N~Ls-~LP~l----p~~L~~L~Ls~N~L~ 375 (788)
T PRK15387 312 NQLAS-LPALP---SELCKLWAYNNQLTSL-PTL------PSGLQELSVSDNQLA-SLPTL----PSELYKLWAYNNRLT 375 (788)
T ss_pred Ccccc-CCCCc---ccccccccccCccccc-ccc------ccccceEecCCCccC-CCCCC----Ccccceehhhccccc
Confidence 66653 33221 2455556666666542 211 134555556655555 34431 124555555555555
Q ss_pred ccCcccccccCCcceEecCCccceeccCccccCCCCCCEEEccCCcccccCCcccccccccccccccCccceecCCcccc
Q 041479 286 GSIPTEIGNLKNLIIIAIEKFILIRNIPISVGYLLKLQVLSLFENNISREIPSSLGNFTFLTELNLCGNSIRGSVPSALG 365 (771)
Q Consensus 286 ~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 365 (771)
+ +|. . ..+|+.|++++|+|++ +|.. .++|+.|++++|+|++ +|....
T Consensus 376 ~-LP~------------------------l---~~~L~~LdLs~N~Lt~-LP~l---~s~L~~LdLS~N~Lss-IP~l~~ 422 (788)
T PRK15387 376 S-LPA------------------------L---PSGLKELIVSGNRLTS-LPVL---PSELKELMVSGNRLTS-LPMLPS 422 (788)
T ss_pred c-Ccc------------------------c---ccccceEEecCCcccC-CCCc---ccCCCEEEccCCcCCC-CCcchh
Confidence 2 232 1 1346666666666663 4432 2456666777776663 443322
Q ss_pred cccce-eeecccCcccCCCCcCCCCCCCCCeEECCCCcccccCCcch
Q 041479 366 SCHQL-WLDLSHNHLTGPIPLAVGNPKSIPHLDLSKNELSGEIPSSL 411 (771)
Q Consensus 366 ~l~~l-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l 411 (771)
.| .|++++|+|+ .+|..+..+++|+.|+|++|+|++..|..+
T Consensus 423 ---~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~~L 465 (788)
T PRK15387 423 ---GLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQAL 465 (788)
T ss_pred ---hhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHHHHH
Confidence 23 4666666666 456666677777777777777776665544
No 404
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.91 E-value=2.6e-24 Score=246.20 Aligned_cols=244 Identities=27% Similarity=0.324 Sum_probs=177.4
Q ss_pred CcEEEEEcCCCCCcccCCccccCCCCCcEEEcCCCcccccCCccccCCCCCCEEecccCcCcccCCcccccCCcccccCC
Q 041479 44 QRVILLNLSGQNLTGTASPYIGNLTFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNALQGQIPDSRLILNKLEGNIP 123 (771)
Q Consensus 44 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~l~~n~l~~~~p 123 (771)
.+++.|++++|+|+. +|. .+++|++|+|++|+|++ +|.. .++|+.|++++|.|+ .+|
T Consensus 222 ~~L~~L~L~~N~Lt~-LP~---lp~~Lk~LdLs~N~Lts-LP~l---p~sL~~L~Ls~N~L~---------------~Lp 278 (788)
T PRK15387 222 AHITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLTS-LPVL---PPGLLELSIFSNPLT---------------HLP 278 (788)
T ss_pred cCCCEEEccCCcCCC-CCC---CCCCCcEEEecCCccCc-ccCc---ccccceeeccCCchh---------------hhh
Confidence 478999999999995 443 36899999999999996 6753 468999999999976 344
Q ss_pred ccccCCCCCCEEecccccCcCCCCccceeeecccccccccCccccCCCCCCEEecccCcCcccCChhhhhCCCCCcEEEe
Q 041479 124 SELGSLLKFKGLGLANNYFTGPIPHLNMFQVSVYSLTGSIPIQLLNITSMEYFHVSENQLVGELPPHIGFTLPNVRILLL 203 (771)
Q Consensus 124 ~~~~~l~~L~~L~Ls~N~l~~~lp~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L 203 (771)
..+ .+|+.|++++|+|+ .+|. .+++|+.|+|++|+|+ .+|.. ..+|+.|++
T Consensus 279 ~lp---~~L~~L~Ls~N~Lt------------------~LP~---~p~~L~~LdLS~N~L~-~Lp~l----p~~L~~L~L 329 (788)
T PRK15387 279 ALP---SGLCKLWIFGNQLT------------------SLPV---LPPGLQELSVSDNQLA-SLPAL----PSELCKLWA 329 (788)
T ss_pred hch---hhcCEEECcCCccc------------------cccc---cccccceeECCCCccc-cCCCC----ccccccccc
Confidence 322 56788999999887 3343 2468999999999999 68752 246889999
Q ss_pred ecCcccccCCccccCCCCCCEEEccccccCCCCCcCcccccCCCCCcEEEccCccccccCChhhhhcccccceeecccCc
Q 041479 204 AGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSLSGTLPNSLANFSSHLRYLYMSANP 283 (771)
Q Consensus 204 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~ 283 (771)
++|+|++ +|.. ..+|+.|+|++|+|+++ |... .+|+.|++++|+|+ .+|.. .++|+.|++++|+
T Consensus 330 s~N~L~~-LP~l---p~~Lq~LdLS~N~Ls~L-P~lp------~~L~~L~Ls~N~L~-~LP~l----~~~L~~LdLs~N~ 393 (788)
T PRK15387 330 YNNQLTS-LPTL---PSGLQELSVSDNQLASL-PTLP------SELYKLWAYNNRLT-SLPAL----PSGLKELIVSGNR 393 (788)
T ss_pred ccCcccc-cccc---ccccceEecCCCccCCC-CCCC------cccceehhhccccc-cCccc----ccccceEEecCCc
Confidence 9999985 5542 25899999999999975 4322 56788899999999 57753 2479999999999
Q ss_pred CcccCcccccccCCcceEecCCccceeccCccccCCCCCCEEEccCCcccccCCcccccccccccccccCccceecCCcc
Q 041479 284 ISGSIPTEIGNLKNLIIIAIEKFILIRNIPISVGYLLKLQVLSLFENNISREIPSSLGNFTFLTELNLCGNSIRGSVPSA 363 (771)
Q Consensus 284 l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 363 (771)
|++ +|... ++|+.|++++|.+.+ +|.. ..+|+.|++++|+|+ .+|..+..+++|+.|+|++|+|++..+..
T Consensus 394 Lt~-LP~l~---s~L~~LdLS~N~Lss-IP~l---~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~~~~~ 464 (788)
T PRK15387 394 LTS-LPVLP---SELKELMVSGNRLTS-LPML---PSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQA 464 (788)
T ss_pred ccC-CCCcc---cCCCEEEccCCcCCC-CCcc---hhhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCchHHHH
Confidence 994 55432 456666777766643 4432 234566666666665 45666666666666666666666555444
Q ss_pred c
Q 041479 364 L 364 (771)
Q Consensus 364 ~ 364 (771)
+
T Consensus 465 L 465 (788)
T PRK15387 465 L 465 (788)
T ss_pred H
Confidence 4
No 405
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.91 E-value=4.1e-24 Score=236.89 Aligned_cols=239 Identities=17% Similarity=0.168 Sum_probs=159.7
Q ss_pred ccccccccccccccceEEEEEec----------------CCCeEEEEEEeeccchhhHH--------------HHHHHHH
Q 041479 521 KDLLLNVSYESLVKATVYKGILD----------------LDQTFIAVKVLFLHQRGALK--------------SFMAECQ 570 (771)
Q Consensus 521 ~~~~~~~~l~~~~~~~Vy~~~~~----------------~~~~~vAvK~~~~~~~~~~~--------------~~~~E~~ 570 (771)
.++.....+|+|.||+||+|.+. ..++.||||++........+ .+..|+.
T Consensus 145 d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~~ 224 (507)
T PLN03224 145 DDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEAY 224 (507)
T ss_pred cCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHHH
Confidence 34455667899999999999752 23457999999654333223 3445777
Q ss_pred HHhccCCCCc-----eeEEEEeecCCCC---CceeEEEEEEeccCCCCCCCc---------------------------c
Q 041479 571 ALRNIRHRNL-----VKIITACSTSDFQ---GNYFRALVYEFMHHGSLESCP---------------------------R 615 (771)
Q Consensus 571 ~l~~l~H~nI-----v~l~~~~~~~~~~---~~~~~~lv~e~~~~g~L~~~~---------------------------~ 615 (771)
++.+++|.++ ++++++|...... .....++||||+++|+|.++. .
T Consensus 225 ~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~ 304 (507)
T PLN03224 225 MCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQD 304 (507)
T ss_pred HHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccc
Confidence 7888876554 7788887543111 112579999999999985431 1
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCcccccccccccccccc
Q 041479 616 ILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYAT 695 (771)
Q Consensus 616 ~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~a 695 (771)
.+++..+..++.|++.||+|+|+. +|+||||||+||+++.++.+||+|||+++....... .......+|+.|+|
T Consensus 305 ~~~~~~~~~i~~ql~~aL~~lH~~---~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~---~~~~~g~~tp~Y~a 378 (507)
T PLN03224 305 KRDINVIKGVMRQVLTGLRKLHRI---GIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGIN---FNPLYGMLDPRYSP 378 (507)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCchHhEEECCCCcEEEEeCcCccccccCCc---cCccccCCCcceeC
Confidence 235667888999999999999985 899999999999999999999999999975533221 11112235789999
Q ss_pred hh-------------------------------------HHHHHHHHHhCCC-CCCccccCC-------ccHHHHHH---
Q 041479 696 PE-------------------------------------YGILLLEIFTGKR-PTSDMFTEG-------LDLHNFVK--- 727 (771)
Q Consensus 696 PE-------------------------------------~Gv~l~el~tg~~-P~~~~~~~~-------~~~~~~~~--- 727 (771)
|| +||++|||++|.. |+.+..... .....|..
T Consensus 379 PE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~ 458 (507)
T PLN03224 379 PEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKG 458 (507)
T ss_pred hhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcc
Confidence 99 2999999999875 665422111 11222221
Q ss_pred hhCCCchhhhcCccccccCcccChhch---hhcCCHHHHHH
Q 041479 728 MALPDQILQVLDPLFLVGGVQEGEETA---EENIKKGQIRE 765 (771)
Q Consensus 728 ~~~~~~~~~~~~~~~~~~~~~cl~~~p---~~Rpt~~~vl~ 765 (771)
..+.....+.+++..+.+..+++.++| .+|+|+.|+++
T Consensus 459 ~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~ 499 (507)
T PLN03224 459 QKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALS 499 (507)
T ss_pred cCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhC
Confidence 111112222333333445557787655 78999999985
No 406
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.91 E-value=4.3e-23 Score=254.26 Aligned_cols=348 Identities=18% Similarity=0.251 Sum_probs=187.9
Q ss_pred CcEEEEEcCCCCCcc--cCCccccCCCCCcEEEcCCCc------ccccCCccccCCC-CCCEEecccCcCcccCCccccc
Q 041479 44 QRVILLNLSGQNLTG--TASPYIGNLTFLRLINLQQNN------FSSNIPHEIGRLF-RLRHIIFNSNALQGQIPDSRLI 114 (771)
Q Consensus 44 ~~l~~L~Ls~n~l~~--~~~~~~~~l~~L~~L~Ls~N~------l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~l~ 114 (771)
.++..+.+..+.+.. ..+.+|.++++|+.|.+..+. +...+|+.|..++ +|+.|++.+|.++
T Consensus 532 ~~v~~i~l~~~~~~~~~i~~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~--------- 602 (1153)
T PLN03210 532 KKVLGITLDIDEIDELHIHENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR--------- 602 (1153)
T ss_pred ceeeEEEeccCccceeeecHHHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC---------
Confidence 355555554444432 345678899999999987664 3335777787774 6999999998876
Q ss_pred CCcccccCCccccCCCCCCEEecccccCcC------CCCccceeeecccccccccCccccCCCCCCEEecccCcCcccCC
Q 041479 115 LNKLEGNIPSELGSLLKFKGLGLANNYFTG------PIPHLNMFQVSVYSLTGSIPIQLLNITSMEYFHVSENQLVGELP 188 (771)
Q Consensus 115 ~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~------~lp~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp 188 (771)
.+|..| ...+|+.|++++|++.. .+++|+.++++.+...+.+| .+..+++|+.|+|++|.....+|
T Consensus 603 ------~lP~~f-~~~~L~~L~L~~s~l~~L~~~~~~l~~Lk~L~Ls~~~~l~~ip-~ls~l~~Le~L~L~~c~~L~~lp 674 (1153)
T PLN03210 603 ------CMPSNF-RPENLVKLQMQGSKLEKLWDGVHSLTGLRNIDLRGSKNLKEIP-DLSMATNLETLKLSDCSSLVELP 674 (1153)
T ss_pred ------CCCCcC-CccCCcEEECcCccccccccccccCCCCCEEECCCCCCcCcCC-ccccCCcccEEEecCCCCccccc
Confidence 566666 46788899999888762 23445555555544333444 24555556666665554333555
Q ss_pred hhhhhCCCCCcEEEeecCcccccCCccccCCCCCCEEEccccccCCCCCcCcccccCCCCCcEEEccCccccccCChhhh
Q 041479 189 PHIGFTLPNVRILLLAGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSLSGTLPNSLA 268 (771)
Q Consensus 189 ~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~ 268 (771)
..+. .+++|+.|++++|...+.+|..+ ++++|+.|+|++|...+.+|.. .++|+.|++++|.+. .+|..+
T Consensus 675 ~si~-~L~~L~~L~L~~c~~L~~Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~------~~nL~~L~L~~n~i~-~lP~~~- 744 (1153)
T PLN03210 675 SSIQ-YLNKLEDLDMSRCENLEILPTGI-NLKSLYRLNLSGCSRLKSFPDI------STNISWLDLDETAIE-EFPSNL- 744 (1153)
T ss_pred hhhh-ccCCCCEEeCCCCCCcCccCCcC-CCCCCCEEeCCCCCCccccccc------cCCcCeeecCCCccc-cccccc-
Confidence 5544 55556666665543333444433 4555566666555433333321 234555556655554 455433
Q ss_pred hcccccceeecccCcCc-------ccCcccccccCCcceEecCCccceeccCccccCCCCCCEEEccCCcccccCCcccc
Q 041479 269 NFSSHLRYLYMSANPIS-------GSIPTEIGNLKNLIIIAIEKFILIRNIPISVGYLLKLQVLSLFENNISREIPSSLG 341 (771)
Q Consensus 269 ~l~~~L~~L~Ls~N~l~-------~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 341 (771)
.+. +|++|++.++... ...|..+...++|+.|++++|.....+|.+++++++|+.|++++|..-+.+|..+
T Consensus 745 ~l~-~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~- 822 (1153)
T PLN03210 745 RLE-NLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI- 822 (1153)
T ss_pred ccc-ccccccccccchhhccccccccchhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-
Confidence 222 4555555542211 1111122223455666666655555556666666666666665543223444443
Q ss_pred cccccccccccCccceecCCcccccccce-eeecccCcccCCCCcCCCCCCCCCeEECCC-CcccccCCcchhhhhcccc
Q 041479 342 NFTFLTELNLCGNSIRGSVPSALGSCHQL-WLDLSHNHLTGPIPLAVGNPKSIPHLDLSK-NELSGEIPSSLAWIFGYIS 419 (771)
Q Consensus 342 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~l~~~~~~l~ 419 (771)
.+++|+.|+|++|..-..+|... ..+ .|+|++|.++ .+|..+..+++|+.|+|++ |+++ .+|..+. .++
T Consensus 823 ~L~sL~~L~Ls~c~~L~~~p~~~---~nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~-~l~~~~~----~L~ 893 (1153)
T PLN03210 823 NLESLESLDLSGCSRLRTFPDIS---TNISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQ-RVSLNIS----KLK 893 (1153)
T ss_pred CccccCEEECCCCCccccccccc---cccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcC-ccCcccc----ccc
Confidence 45566666666554333333322 223 4556666655 3455555566666666655 3444 3333322 455
Q ss_pred cccEEECcCC
Q 041479 420 IFAKLNLSYN 429 (771)
Q Consensus 420 ~L~~L~Ls~N 429 (771)
.|+.++++++
T Consensus 894 ~L~~L~l~~C 903 (1153)
T PLN03210 894 HLETVDFSDC 903 (1153)
T ss_pred CCCeeecCCC
Confidence 5555555554
No 407
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.89 E-value=2.3e-22 Score=247.83 Aligned_cols=326 Identities=21% Similarity=0.329 Sum_probs=259.5
Q ss_pred CcEEEEEcCCCC------CcccCCccccCCC-CCcEEEcCCCcccccCCccccCCCCCCEEecccCcCcccCCcccccCC
Q 041479 44 QRVILLNLSGQN------LTGTASPYIGNLT-FLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNALQGQIPDSRLILN 116 (771)
Q Consensus 44 ~~l~~L~Ls~n~------l~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~l~~n 116 (771)
.++..|.+.++. +...+|+.|..++ +|+.|++.+|.+. .+|..| ...+|+.|++++|++.
T Consensus 558 ~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~----------- 624 (1153)
T PLN03210 558 RNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE----------- 624 (1153)
T ss_pred ccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-----------
Confidence 466777775543 3335677777764 5999999999998 478887 5799999999999976
Q ss_pred cccccCCccccCCCCCCEEecccccCcC------CCCccceeeecccccccccCccccCCCCCCEEecccCcCcccCChh
Q 041479 117 KLEGNIPSELGSLLKFKGLGLANNYFTG------PIPHLNMFQVSVYSLTGSIPIQLLNITSMEYFHVSENQLVGELPPH 190 (771)
Q Consensus 117 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~------~lp~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~ 190 (771)
.++..+..+++|+.|+|+++.... .+++|+.|++++|..-..+|..+.++++|+.|++++|...+.+|..
T Consensus 625 ----~L~~~~~~l~~Lk~L~Ls~~~~l~~ip~ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~ 700 (1153)
T PLN03210 625 ----KLWDGVHSLTGLRNIDLRGSKNLKEIPDLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPTG 700 (1153)
T ss_pred ----ccccccccCCCCCEEECCCCCCcCcCCccccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCCc
Confidence 567778889999999999875332 3556899999998877789999999999999999997544589976
Q ss_pred hhhCCCCCcEEEeecCcccccCCccccCCCCCCEEEccccccCCCCCcCcccccCCCCCcEEEccCcccc---c---cCC
Q 041479 191 IGFTLPNVRILLLAGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSLS---G---TLP 264 (771)
Q Consensus 191 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~---~---~~p 264 (771)
+ ++++|+.|++++|.....+|.. ..+|+.|+|++|.++.+ |..+ .+++|+.|++.++... + .++
T Consensus 701 i--~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~~l-P~~~----~l~~L~~L~l~~~~~~~l~~~~~~l~ 770 (1153)
T PLN03210 701 I--NLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIEEF-PSNL----RLENLDELILCEMKSEKLWERVQPLT 770 (1153)
T ss_pred C--CCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCccccc-cccc----cccccccccccccchhhccccccccc
Confidence 5 7899999999999766666643 46899999999999754 4432 5678888888774322 1 122
Q ss_pred hhhhhcccccceeecccCcCcccCcccccccCCcceEecCCccceeccCccccCCCCCCEEEccCCcccccCCccccccc
Q 041479 265 NSLANFSSHLRYLYMSANPISGSIPTEIGNLKNLIIIAIEKFILIRNIPISVGYLLKLQVLSLFENNISREIPSSLGNFT 344 (771)
Q Consensus 265 ~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 344 (771)
.......++|+.|+|++|...+.+|.+++++++|+.|++++|...+.+|... .+++|+.|++++|.....+|.. .+
T Consensus 771 ~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~---~~ 846 (1153)
T PLN03210 771 PLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDI---ST 846 (1153)
T ss_pred hhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCcccccccc---cc
Confidence 2223334589999999998888899999999999999999987777888776 7999999999998655556643 36
Q ss_pred ccccccccCccceecCCcccccccce-eeeccc-CcccCCCCcCCCCCCCCCeEECCCCc
Q 041479 345 FLTELNLCGNSIRGSVPSALGSCHQL-WLDLSH-NHLTGPIPLAVGNPKSIPHLDLSKNE 402 (771)
Q Consensus 345 ~L~~L~Ls~N~l~~~~p~~~~~l~~l-~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~ 402 (771)
+|+.|+|++|.|+ .+|.++..++.| .|++++ |++. .+|..+..+++|+.++++++.
T Consensus 847 nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~-~l~~~~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 847 NISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQ-RVSLNISKLKHLETVDFSDCG 904 (1153)
T ss_pred ccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcC-ccCcccccccCCCeeecCCCc
Confidence 8999999999998 688889999999 999998 5666 577788899999999999874
No 408
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.89 E-value=2.6e-23 Score=239.78 Aligned_cols=325 Identities=20% Similarity=0.301 Sum_probs=222.8
Q ss_pred cHHHHHHHHhcCCCCCCCCCCC----CCCCCCCcccee----------------eeecCCCCcEEEEEcCCCCCcccC--
Q 041479 3 DKQALLAFKSKVDDDPFGALST----WNDSVNFCQWLG----------------VTCSLKYQRVILLNLSGQNLTGTA-- 60 (771)
Q Consensus 3 ~~~~l~~~~~~~~~~~~~~~~~----w~~~~~~c~w~~----------------v~c~~~~~~l~~L~Ls~n~l~~~~-- 60 (771)
|.+.+++..+.+.- .+.+.+ |.+.+++|.-.. |.|.. ..++.+..-+.......
T Consensus 64 ~~~~~~~~~~~l~~--p~~~~~~~~~~~~~~~fc~~~~~~~~~l~~~~~~~~~tv~~~~--~~vt~l~~~g~~~~~~~~~ 139 (754)
T PRK15370 64 EIKSKFECLRMLAF--PAYADNIQYSRGGADQYCILSENSQEILSIVFNTEGYTVEGGG--KSVTYTRVTESEQASSASG 139 (754)
T ss_pred HHHHHHHHHHHhcC--CchhhccccccCCCCcccccCCcchhhheeeecCCceEEecCC--CcccccccccccccccCCC
Confidence 55778888888853 345666 988889995333 56654 45555554332211100
Q ss_pred C--------------------------ccc-----cCCCCCcEEEcCCCcccccCCccccCCCCCCEEecccCcCcccCC
Q 041479 61 S--------------------------PYI-----GNLTFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNALQGQIP 109 (771)
Q Consensus 61 ~--------------------------~~~-----~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 109 (771)
+ .++ .-..+...|+++++++++ +|..+. ++|+.|+|++|+|+
T Consensus 140 ~~~~~~~~~~w~~w~~~~~~~~~~~r~~a~~r~~~Cl~~~~~~L~L~~~~Lts-LP~~Ip--~~L~~L~Ls~N~Lt---- 212 (754)
T PRK15370 140 SKDAVNYELIWSEWVKEAPAKEAANREEAVQRMRDCLKNNKTELRLKILGLTT-IPACIP--EQITTLILDNNELK---- 212 (754)
T ss_pred CCChhhHHHHHHHHHhcCCCCccccHHHHHHHHHhhcccCceEEEeCCCCcCc-CCcccc--cCCcEEEecCCCCC----
Confidence 0 000 112457899999999985 777664 57999999999987
Q ss_pred cccccCCcccccCCccccCCCCCCEEecccccCcCCCCccceeeecccccccccCccccCCCCCCEEecccCcCcccCCh
Q 041479 110 DSRLILNKLEGNIPSELGSLLKFKGLGLANNYFTGPIPHLNMFQVSVYSLTGSIPIQLLNITSMEYFHVSENQLVGELPP 189 (771)
Q Consensus 110 ~~~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~ 189 (771)
.+|..+. .+|+.|++++|+|+ .+|..+. .+|+.|+|++|+++ .+|.
T Consensus 213 -----------sLP~~l~--~nL~~L~Ls~N~Lt------------------sLP~~l~--~~L~~L~Ls~N~L~-~LP~ 258 (754)
T PRK15370 213 -----------SLPENLQ--GNIKTLYANSNQLT------------------SIPATLP--DTIQEMELSINRIT-ELPE 258 (754)
T ss_pred -----------cCChhhc--cCCCEEECCCCccc------------------cCChhhh--ccccEEECcCCccC-cCCh
Confidence 3454443 47899999999887 2333332 36888888888888 7887
Q ss_pred hhhhCCCCCcEEEeecCcccccCCccccCCCCCCEEEccccccCCCCCcCcccccCCCCCcEEEccCccccccCChhhhh
Q 041479 190 HIGFTLPNVRILLLAGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSLSGTLPNSLAN 269 (771)
Q Consensus 190 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~ 269 (771)
.+. ++|+.|++++|+|+ .+|..+. ++|+.|++++|+|+++ |..+ .++|+.|++++|+++ .+|..+.
T Consensus 259 ~l~---s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt~L-P~~l-----p~sL~~L~Ls~N~Lt-~LP~~l~- 324 (754)
T PRK15370 259 RLP---SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIRTL-PAHL-----PSGITHLNVQSNSLT-ALPETLP- 324 (754)
T ss_pred hHh---CCCCEEECcCCccC-ccccccC--CCCcEEECCCCccccC-cccc-----hhhHHHHHhcCCccc-cCCcccc-
Confidence 664 47888888888888 4566554 5788889999888864 4333 146788888888888 5665543
Q ss_pred cccccceeecccCcCcccCcccccccCCcceEecCCccceeccCccccCCCCCCEEEccCCcccccCCcccccccccccc
Q 041479 270 FSSHLRYLYMSANPISGSIPTEIGNLKNLIIIAIEKFILIRNIPISVGYLLKLQVLSLFENNISREIPSSLGNFTFLTEL 349 (771)
Q Consensus 270 l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 349 (771)
++|+.|++++|.+++ +|..+. ++|+.|++++|++. .+|..+ .++|+.|+|++|+|+ .+|..+. .+|+.|
T Consensus 325 --~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~-~LP~~l--p~~L~~LdLs~N~Lt-~LP~~l~--~sL~~L 393 (754)
T PRK15370 325 --PGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQIT-VLPETL--PPTITTLDVSRNALT-NLPENLP--AALQIM 393 (754)
T ss_pred --ccceeccccCCcccc-CChhhc--CcccEEECCCCCCC-cCChhh--cCCcCEEECCCCcCC-CCCHhHH--HHHHHH
Confidence 478889999998884 666554 68888999888875 466555 368999999999998 4666554 478999
Q ss_pred cccCccceecCCccccc----ccce-eeecccCcccCCCCcCCCCCCCCCeEECCCCcccc
Q 041479 350 NLCGNSIRGSVPSALGS----CHQL-WLDLSHNHLTGPIPLAVGNPKSIPHLDLSKNELSG 405 (771)
Q Consensus 350 ~Ls~N~l~~~~p~~~~~----l~~l-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 405 (771)
++++|+|+ .+|..+.. ++.+ .|++.+|.++. ..+.+|+.| ++.+.+.|
T Consensus 394 dLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls~------~tl~~L~~L-l~s~~~~g 446 (754)
T PRK15370 394 QASRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFSE------RTIQNMQRL-MSSVGYQG 446 (754)
T ss_pred hhccCCcc-cCchhHHHHhhcCCCccEEEeeCCCccH------HHHHHHHHh-hhcccccC
Confidence 99999998 55654433 3555 78999998872 234555555 44454443
No 409
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.89 E-value=1.3e-23 Score=221.02 Aligned_cols=159 Identities=23% Similarity=0.253 Sum_probs=133.3
Q ss_pred ccccccccccceEEEEEecCCCeEEEEEEeeccch--------hhHHHHHHHHHHHhccC---CCCceeEEEEeecCCCC
Q 041479 525 LNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQR--------GALKSFMAECQALRNIR---HRNLVKIITACSTSDFQ 593 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~--------~~~~~~~~E~~~l~~l~---H~nIv~l~~~~~~~~~~ 593 (771)
-...+|+|++|.|+.|+++.....|+||.+...+- ...-..-.||+||..++ |+||++++++|++.+
T Consensus 565 tlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEddd-- 642 (772)
T KOG1152|consen 565 TLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDDD-- 642 (772)
T ss_pred eeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeecCC--
Confidence 34578999999999999999999999999965531 11223456999999997 999999999998888
Q ss_pred CceeEEEEEEecc-CCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccC
Q 041479 594 GNYFRALVYEFMH-HGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGL 669 (771)
Q Consensus 594 ~~~~~~lv~e~~~-~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl 669 (771)
++|++||-.. +-+|.++ ...+++.+...|+.||+-|+++||++ +|||||||-+||.++.+|-+|++|||.
T Consensus 643 ---~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~---~ivhrdikdenvivd~~g~~klidfgs 716 (772)
T KOG1152|consen 643 ---YYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQ---GIVHRDIKDENVIVDSNGFVKLIDFGS 716 (772)
T ss_pred ---eeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhcccccccc---CceecccccccEEEecCCeEEEeeccc
Confidence 7899999763 3455555 56789999999999999999999997 999999999999999999999999999
Q ss_pred ccccCcccCCcccccccccccccccchh
Q 041479 670 TRFIPEVMSSNQCSSVGLKGTVGYATPE 697 (771)
Q Consensus 670 a~~~~~~~~~~~~~~~~~~gt~~y~aPE 697 (771)
|........ ..++||..|.|||
T Consensus 717 aa~~ksgpf------d~f~gtv~~aape 738 (772)
T KOG1152|consen 717 AAYTKSGPF------DVFVGTVDYAAPE 738 (772)
T ss_pred hhhhcCCCc------ceeeeeccccchh
Confidence 876544322 2367999999997
No 410
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.88 E-value=2.4e-24 Score=206.82 Aligned_cols=186 Identities=20% Similarity=0.229 Sum_probs=149.5
Q ss_pred ccccccccccccccceEEEEEecCCCeEEEEEEeecc--chhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeE
Q 041479 521 KDLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLH--QRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFR 598 (771)
Q Consensus 521 ~~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 598 (771)
.+....-++|-|.||.||..+++.+++.||.|++.-- +-...+++.+|+.++.-++|.||+..+++-.-.....-.++
T Consensus 53 ~Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEi 132 (449)
T KOG0664|consen 53 QDIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQEL 132 (449)
T ss_pred ccCCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHH
Confidence 3445566789999999999999999999999998432 23456889999999999999999999887644332111246
Q ss_pred EEEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCc
Q 041479 599 ALVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPE 675 (771)
Q Consensus 599 ~lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~ 675 (771)
|.+.|.|.. +|... .+.++...+.-+..||++||.|||+. +|.||||||.|.|+.++..+||||||+|+....
T Consensus 133 YV~TELmQS-DLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~ 208 (449)
T KOG0664|consen 133 YVLTELMQS-DLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLLVNSNCILKICDFGLARTWDQ 208 (449)
T ss_pred HHHHHHHHh-hhhheeccCCCCCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEEeccCceEEecccccccccch
Confidence 788999854 77665 45677777888889999999999996 999999999999999999999999999997654
Q ss_pred ccCCcccccccccccccccchh----------------HHHHHHHHHhCCCCCC
Q 041479 676 VMSSNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTS 713 (771)
Q Consensus 676 ~~~~~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~ 713 (771)
... ...+..+-|-+|+||| .||++.|++.++.-|.
T Consensus 209 d~~---~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQ 259 (449)
T KOG0664|consen 209 RDR---LNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQ 259 (449)
T ss_pred hhh---hhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhh
Confidence 432 2233445788999999 4999999999887764
No 411
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.88 E-value=3.4e-23 Score=199.20 Aligned_cols=225 Identities=20% Similarity=0.217 Sum_probs=161.4
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhcc-CCCCceeEEEEeecCCCCCceeEEEEEEe
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNI-RHRNLVKIITACSTSDFQGNYFRALVYEF 604 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~~~~lv~e~ 604 (771)
...+|+|-||.+-.++++...+.+|+|.+..... ..++|.+|..---.+ .|.||+.-|+..... ...+++++||
T Consensus 29 ~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~t-t~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt----~d~YvF~qE~ 103 (378)
T KOG1345|consen 29 NKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQT-TQADFVREFHYSFFLSPHQHIIDTYEVAFQT----SDAYVFVQEF 103 (378)
T ss_pred HHHhcccceeeEEeeeccCCceEEEeeccCcchh-hHHHHHHHhccceeeccchhhhHHHHHHhhc----CceEEEeecc
Confidence 3468999999999999999999999999865443 457899988654444 499999988764332 2277899999
Q ss_pred ccCCCCCCC--cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeC--CCCceEEecccCccccCcccCCc
Q 041479 605 MHHGSLESC--PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD--NDMTAHMGDFGLTRFIPEVMSSN 680 (771)
Q Consensus 605 ~~~g~L~~~--~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~--~~~~~kl~DfGla~~~~~~~~~~ 680 (771)
++.|||..- ...+.+....+++.|+++|++|||+. .+||||||.+||||- +..++|+||||..+..+.....
T Consensus 104 aP~gdL~snv~~~GigE~~~K~v~~ql~SAi~fMHsk---nlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV~~- 179 (378)
T KOG1345|consen 104 APRGDLRSNVEAAGIGEANTKKVFAQLLSAIEFMHSK---NLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTVKY- 179 (378)
T ss_pred CccchhhhhcCcccccHHHHHHHHHHHHHHHHHhhcc---chhhcccccceEEEecCCccEEEeeecccccccCceehh-
Confidence 999999765 33467788899999999999999985 999999999999994 3458999999998855443221
Q ss_pred ccccccccccccccchh--------------------HHHHHHHHHhCCCCCCccccCCccHHHH---HHhhCCCchhhh
Q 041479 681 QCSSVGLKGTVGYATPE--------------------YGILLLEIFTGKRPTSDMFTEGLDLHNF---VKMALPDQILQV 737 (771)
Q Consensus 681 ~~~~~~~~gt~~y~aPE--------------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~---~~~~~~~~~~~~ 737 (771)
..-+-.|.||| ||+++|..+||+.||...+..+....+| ..+..+ ..++.
T Consensus 180 ------~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~-~~P~~ 252 (378)
T KOG1345|consen 180 ------LEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNP-ALPKK 252 (378)
T ss_pred ------hhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCc-cCchh
Confidence 12355688888 7999999999999998666555544444 444333 22222
Q ss_pred c---CccccccCcccChhchhhcCCHHHHHHH
Q 041479 738 L---DPLFLVGGVQEGEETAEENIKKGQIRES 766 (771)
Q Consensus 738 ~---~~~~~~~~~~cl~~~p~~Rpt~~~vl~~ 766 (771)
+ ++.....-.+-+..+|.+|-.+.++-.+
T Consensus 253 F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~ 284 (378)
T KOG1345|consen 253 FNPFSEKALRLFKKSLTPRFKDRCKIWTAKKM 284 (378)
T ss_pred hcccCHHHHHHHHHhcCCcccccchhHHHHHH
Confidence 2 2221111114456677777555554443
No 412
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.88 E-value=4.1e-22 Score=198.78 Aligned_cols=205 Identities=28% Similarity=0.380 Sum_probs=160.7
Q ss_pred ccccccceEEEEEecCCCeEEEEEEeeccchh-hHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEeccC
Q 041479 529 YESLVKATVYKGILDLDQTFIAVKVLFLHQRG-ALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHH 607 (771)
Q Consensus 529 l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~~~~ 607 (771)
+|+|.+|.||+++...+++.++||++...... ..+.+.+|++.++.++|++|+++++++.... ..+++|||+++
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~-----~~~~~~e~~~~ 75 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDEN-----HLYLVMEYCEG 75 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCC-----eEEEEEecCCC
Confidence 47899999999999887889999999765432 4578999999999999999999999988765 67999999999
Q ss_pred CCCCCCc----ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCC-CCceEEecccCccccCcccCCccc
Q 041479 608 GSLESCP----RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN-DMTAHMGDFGLTRFIPEVMSSNQC 682 (771)
Q Consensus 608 g~L~~~~----~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~-~~~~kl~DfGla~~~~~~~~~~~~ 682 (771)
++|.++. ..+++..+..++.+++++++|||+. +++|+|++|.||+++. ++.++++|||.+........
T Consensus 76 ~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~---- 148 (215)
T cd00180 76 GSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS---- 148 (215)
T ss_pred CcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc----
Confidence 9998772 2578999999999999999999986 9999999999999998 89999999999986544321
Q ss_pred ccccccccccccchhHHHHHHHHHhCC---CCCCccccCCccHHHHHHhhCCCchhhhcCccccccCcccChhchhhcCC
Q 041479 683 SSVGLKGTVGYATPEYGILLLEIFTGK---RPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFLVGGVQEGEETAEENIK 759 (771)
Q Consensus 683 ~~~~~~gt~~y~aPE~Gv~l~el~tg~---~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt 759 (771)
......+...|++|| ...+. .+..|.|..+..+.++ ..+.....+|+..+|++||+
T Consensus 149 ~~~~~~~~~~~~~pe-------~~~~~~~~~~~~D~~~lg~~~~~l--------------~~~~~~l~~~l~~~p~~R~~ 207 (215)
T cd00180 149 LLKTIVGTPAYMAPE-------VLLGKGYYSEKSDIWSLGVILYEL--------------PELKDLIRKMLQKDPEKRPS 207 (215)
T ss_pred hhhcccCCCCccChh-------HhcccCCCCchhhhHHHHHHHHHH--------------HHHHHHHHHHhhCCcccCcC
Confidence 112234678899997 22211 1223455444433333 33334455999999999999
Q ss_pred HHHHHHH
Q 041479 760 KGQIRES 766 (771)
Q Consensus 760 ~~~vl~~ 766 (771)
+.++++.
T Consensus 208 ~~~l~~~ 214 (215)
T cd00180 208 AKEILEH 214 (215)
T ss_pred HHHHhhC
Confidence 9999864
No 413
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.87 E-value=9.6e-22 Score=209.06 Aligned_cols=160 Identities=23% Similarity=0.132 Sum_probs=122.6
Q ss_pred ccccccccccccceEEEEEecC-CCeEEEEEEeecc-----chhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCce
Q 041479 523 LLLNVSYESLVKATVYKGILDL-DQTFIAVKVLFLH-----QRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNY 596 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~-~~~~vAvK~~~~~-----~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~ 596 (771)
+.....+|+|.+|+||+|+++. +++.||||++... .....+.|.+|++++++++|+|||+.+..+ +
T Consensus 20 Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~---~----- 91 (365)
T PRK09188 20 FVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT---G----- 91 (365)
T ss_pred ceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc---C-----
Confidence 3445568999999999999876 6777899987533 123456799999999999999999633221 2
Q ss_pred eEEEEEEeccCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCC-CCCCeeeCCCCceEEecccCccccCc
Q 041479 597 FRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDL-KPSNVLLDNDMTAHMGDFGLTRFIPE 675 (771)
Q Consensus 597 ~~~lv~e~~~~g~L~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdl-k~~NILl~~~~~~kl~DfGla~~~~~ 675 (771)
..|+||||++|++|.... .. ....++.++++||+|||+. +|+|||| ||+|||++.++.+||+|||+|+.+..
T Consensus 92 ~~~LVmE~~~G~~L~~~~-~~---~~~~~~~~i~~aL~~lH~~---gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~ 164 (365)
T PRK09188 92 KDGLVRGWTEGVPLHLAR-PH---GDPAWFRSAHRALRDLHRA---GITHNDLAKPQNWLMGPDGEAAVIDFQLASVFRR 164 (365)
T ss_pred CcEEEEEccCCCCHHHhC-cc---chHHHHHHHHHHHHHHHHC---CCeeCCCCCcceEEEcCCCCEEEEECccceeccc
Confidence 358999999999996321 11 1256788999999999985 9999999 99999999999999999999997655
Q ss_pred ccCCcc----cccccccccccccchh
Q 041479 676 VMSSNQ----CSSVGLKGTVGYATPE 697 (771)
Q Consensus 676 ~~~~~~----~~~~~~~gt~~y~aPE 697 (771)
...... .......+++.|+|||
T Consensus 165 ~~~~~~~~~~~d~~~~~~~~~~~~pe 190 (365)
T PRK09188 165 RGALYRIAAYEDLRHLLKHKRTYAPD 190 (365)
T ss_pred CcchhhhhhhhhhhhhhccCccCCcc
Confidence 432211 1123567899999998
No 414
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.86 E-value=7.9e-23 Score=201.68 Aligned_cols=177 Identities=23% Similarity=0.235 Sum_probs=139.8
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCc-eeEEEEEE
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGN-YFRALVYE 603 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~-~~~~lv~e 603 (771)
..++.|.. .|-.|-+.-.++.||+|++.... ....++..+|...+..+.|+||++++.++.-...... ...|+|||
T Consensus 23 ~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v~e 101 (369)
T KOG0665|consen 23 KPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYLVME 101 (369)
T ss_pred cccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHHHHHH
Confidence 34556665 66677777777899999985432 2345678899999999999999999999864432111 24689999
Q ss_pred eccCCCCCCC-cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCccc
Q 041479 604 FMHHGSLESC-PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQC 682 (771)
Q Consensus 604 ~~~~g~L~~~-~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~ 682 (771)
||. ++|.+. .-.++..+...+..|++.|++|+|+. +|+||||||+||++..++.+||.|||+|+..... .
T Consensus 102 ~m~-~nl~~vi~~elDH~tis~i~yq~~~~ik~lhs~---~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~-----~ 172 (369)
T KOG0665|consen 102 LMD-ANLCQVILMELDHETISYILYQMLCGIKHLHSA---GIIHRDLKPSNIVVNSDCTLKILDFGLARTEDTD-----F 172 (369)
T ss_pred hhh-hHHHHHHHHhcchHHHHHHHHHHHHHHHHHHhc---ceeecccCcccceecchhheeeccchhhcccCcc-----c
Confidence 995 466554 34578888999999999999999996 9999999999999999999999999999854332 1
Q ss_pred ccccccccccccchh---------------HHHHHHHHHhCCCCCC
Q 041479 683 SSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTS 713 (771)
Q Consensus 683 ~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~ 713 (771)
..+..+.|..|+||| .||++.||++|..-|.
T Consensus 173 ~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~ 218 (369)
T KOG0665|consen 173 MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFP 218 (369)
T ss_pred ccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEec
Confidence 234457899999999 5999999999988664
No 415
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.86 E-value=3.4e-22 Score=230.61 Aligned_cols=252 Identities=26% Similarity=0.375 Sum_probs=161.7
Q ss_pred eeecCCCCcEEEEEcCCCCCcccCCccccCCCCCcEEEcCCCcccccCCccccCCCCCCEEecccCcCcccCCcccccCC
Q 041479 37 VTCSLKYQRVILLNLSGQNLTGTASPYIGNLTFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNALQGQIPDSRLILN 116 (771)
Q Consensus 37 v~c~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~l~~n 116 (771)
..|.. .+.+.|++++++++ .+|..+. ++|+.|+|++|+|++ +|..+. ++|++|++++|+|+
T Consensus 173 ~~Cl~--~~~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls~N~Lts-LP~~l~--~nL~~L~Ls~N~Lt----------- 233 (754)
T PRK15370 173 RDCLK--NNKTELRLKILGLT-TIPACIP--EQITTLILDNNELKS-LPENLQ--GNIKTLYANSNQLT----------- 233 (754)
T ss_pred Hhhcc--cCceEEEeCCCCcC-cCCcccc--cCCcEEEecCCCCCc-CChhhc--cCCCEEECCCCccc-----------
Confidence 34543 35677777777777 3454442 467778888887774 565543 47778888877765
Q ss_pred cccccCCccccCCCCCCEEecccccCcCCCCccceeeecccccccccCccccCCCCCCEEecccCcCcccCChhhhhCCC
Q 041479 117 KLEGNIPSELGSLLKFKGLGLANNYFTGPIPHLNMFQVSVYSLTGSIPIQLLNITSMEYFHVSENQLVGELPPHIGFTLP 196 (771)
Q Consensus 117 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~ 196 (771)
.+|..+. .+|+.|+|++|+++ .+|..+. ++|+.|++++|+|+ .+|..+. +
T Consensus 234 ----sLP~~l~--~~L~~L~Ls~N~L~------------------~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~---~ 283 (754)
T PRK15370 234 ----SIPATLP--DTIQEMELSINRIT------------------ELPERLP--SALQSLDLFHNKIS-CLPENLP---E 283 (754)
T ss_pred ----cCChhhh--ccccEEECcCCccC------------------cCChhHh--CCCCEEECcCCccC-ccccccC---C
Confidence 2333332 25677777777766 2333332 36777888888777 6776543 4
Q ss_pred CCcEEEeecCcccccCCccccCCCCCCEEEccccccCCCCCcCcccccCCCCCcEEEccCccccccCChhhhhcccccce
Q 041479 197 NVRILLLAGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSLSGTLPNSLANFSSHLRY 276 (771)
Q Consensus 197 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~ 276 (771)
+|+.|++++|+|++ +|..+. ++|+.|++++|+++.+ |..+ .++|+.|++++|.++ .+|..+. ++|+.
T Consensus 284 sL~~L~Ls~N~Lt~-LP~~lp--~sL~~L~Ls~N~Lt~L-P~~l-----~~sL~~L~Ls~N~Lt-~LP~~l~---~sL~~ 350 (754)
T PRK15370 284 ELRYLSVYDNSIRT-LPAHLP--SGITHLNVQSNSLTAL-PETL-----PPGLKTLEAGENALT-SLPASLP---PELQV 350 (754)
T ss_pred CCcEEECCCCcccc-Ccccch--hhHHHHHhcCCccccC-Cccc-----cccceeccccCCccc-cCChhhc---CcccE
Confidence 67788888887774 444432 4677777888877754 3322 256777778888777 4665543 36778
Q ss_pred eecccCcCcccCcccccccCCcceEecCCccceeccCccccCCCCCCEEEccCCcccccCCcccc----ccccccccccc
Q 041479 277 LYMSANPISGSIPTEIGNLKNLIIIAIEKFILIRNIPISVGYLLKLQVLSLFENNISREIPSSLG----NFTFLTELNLC 352 (771)
Q Consensus 277 L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~----~l~~L~~L~Ls 352 (771)
|++++|+|+ .+|..+. ++|+.|++++|.+. .+|..+. ..|+.|++++|+|+ .+|..+. .++++..|+|.
T Consensus 351 L~Ls~N~L~-~LP~~lp--~~L~~LdLs~N~Lt-~LP~~l~--~sL~~LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~ 423 (754)
T PRK15370 351 LDVSKNQIT-VLPETLP--PTITTLDVSRNALT-NLPENLP--AALQIMQASRNNLV-RLPESLPHFRGEGPQPTRIIVE 423 (754)
T ss_pred EECCCCCCC-cCChhhc--CCcCEEECCCCcCC-CCCHhHH--HHHHHHhhccCCcc-cCchhHHHHhhcCCCccEEEee
Confidence 888888777 4565543 57777888877775 3455443 35777778888776 4554433 34667777888
Q ss_pred Cccce
Q 041479 353 GNSIR 357 (771)
Q Consensus 353 ~N~l~ 357 (771)
+|.++
T Consensus 424 ~Npls 428 (754)
T PRK15370 424 YNPFS 428 (754)
T ss_pred CCCcc
Confidence 88776
No 416
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.86 E-value=2.5e-22 Score=202.87 Aligned_cols=171 Identities=19% Similarity=0.228 Sum_probs=140.2
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccC-C-C----CceeEEEEeecCCCCCceeEE
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIR-H-R----NLVKIITACSTSDFQGNYFRA 599 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-H-~----nIv~l~~~~~~~~~~~~~~~~ 599 (771)
.-.+|+|.+|.|-.+.+...+..||||+++.- .+..+..+-|++++.++. + | -+|.+.+++...+ +.|
T Consensus 94 ~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V-~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrg-----hiC 167 (415)
T KOG0671|consen 94 VDLLGEGTFGKVVECWDRETKEHVALKIIKNV-DKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRG-----HIC 167 (415)
T ss_pred hhhhcCCcccceEEEeecCCCceehHHHHHHH-HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccC-----ceE
Confidence 45689999999999999999899999999533 345678888999999994 3 2 4778877776555 789
Q ss_pred EEEEeccCCCCCCCc-----ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCC----------------
Q 041479 600 LVYEFMHHGSLESCP-----RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN---------------- 658 (771)
Q Consensus 600 lv~e~~~~g~L~~~~-----~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~---------------- 658 (771)
||+|.+ |-++.++. .+++...+..|+.|++++++|||+. +++|-|+||+|||+.+
T Consensus 168 ivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILfvss~~~~~~~~k~~~~~~ 243 (415)
T KOG0671|consen 168 IVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILFVSSEYFKTYNPKKKVCFI 243 (415)
T ss_pred EEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEEeccceEEEeccCCcccee
Confidence 999988 55777763 3588899999999999999999996 8999999999999932
Q ss_pred ----CCceEEecccCccccCcccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCC
Q 041479 659 ----DMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTS 713 (771)
Q Consensus 659 ----~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~ 713 (771)
+..+|++|||.|++-.+.. ...+.|..|+||| +||+++|+.||..-|.
T Consensus 244 r~~ks~~I~vIDFGsAtf~~e~h-------s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFq 310 (415)
T KOG0671|consen 244 RPLKSTAIKVIDFGSATFDHEHH-------STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQ 310 (415)
T ss_pred ccCCCcceEEEecCCcceeccCc-------ceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecc
Confidence 1248999999998654433 2356899999999 6999999999998775
No 417
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.85 E-value=8.5e-21 Score=191.91 Aligned_cols=177 Identities=32% Similarity=0.408 Sum_probs=150.5
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeeccchh-hHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEec
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLHQRG-ALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFM 605 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~~ 605 (771)
..+++|.+|+||++....+++.||+|.+...... ..+.+.+|++.+++++|+|++++++++.... ..++++||+
T Consensus 5 ~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~-----~~~~v~e~~ 79 (225)
T smart00221 5 KKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPE-----PLYLVMEYC 79 (225)
T ss_pred eEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCC-----ceEEEEecc
Confidence 4578999999999999987889999999766544 6789999999999999999999999987765 679999999
Q ss_pred cCCCCCCCc---cc-CCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCcc
Q 041479 606 HHGSLESCP---RI-LSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQ 681 (771)
Q Consensus 606 ~~g~L~~~~---~~-l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~ 681 (771)
++++|.++. .. +++.....++.+++.++.|+|+. +++|+|++|+||+++.++.++++|||.+.........
T Consensus 80 ~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~-- 154 (225)
T smart00221 80 EGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAA-- 154 (225)
T ss_pred CCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccc--
Confidence 999997762 23 78889999999999999999985 9999999999999999999999999999866543200
Q ss_pred cccccccccccccchh----------------HHHHHHHHHhCCCCCCc
Q 041479 682 CSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSD 714 (771)
Q Consensus 682 ~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~ 714 (771)
......++..|++|| +|++++|+++|+.||..
T Consensus 155 -~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 155 -LLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred -cccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 112345778899999 49999999999999955
No 418
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.83 E-value=5e-23 Score=207.94 Aligned_cols=256 Identities=20% Similarity=0.205 Sum_probs=165.0
Q ss_pred CCCEEecccCcCcccCChhhhhCCCCCcEEEeecCcccccCCccccCCCCCCEEEccc-cccCCCCCcCcccccCCCCCc
Q 041479 172 SMEYFHVSENQLVGELPPHIGFTLPNVRILLLAGNQFFGNIPHSISNASKLEWLDFAN-NSLTGLIPEDLDSLVNCTYLE 250 (771)
Q Consensus 172 ~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~l~~L~ 250 (771)
.-+.++|..|+|+ .||+..|..+++|+.|||++|+|+.+-|++|.++.+|..|-+.+ |+|+.++-..| .+|.+|+
T Consensus 68 ~tveirLdqN~I~-~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F---~gL~slq 143 (498)
T KOG4237|consen 68 ETVEIRLDQNQIS-SIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAF---GGLSSLQ 143 (498)
T ss_pred cceEEEeccCCcc-cCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHh---hhHHHHH
Confidence 4567788888888 88888888888888888888888888888888888877766655 88887766666 6667788
Q ss_pred EEEccCccccccCChhhhhcccccceeecccCcCcccCcccccccCCcceEecCCccc------------eeccCccccC
Q 041479 251 VVSLSVNSLSGTLPNSLANFSSHLRYLYMSANPISGSIPTEIGNLKNLIIIAIEKFIL------------IRNIPISVGY 318 (771)
Q Consensus 251 ~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l------------~~~~p~~~~~ 318 (771)
.|.+.-|++.-...+.|..+. +|..|.+-+|.+..+--.+|.++.+++.+++..|.+ ....|..++.
T Consensus 144 rLllNan~i~Cir~~al~dL~-~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~ietsg 222 (498)
T KOG4237|consen 144 RLLLNANHINCIRQDALRDLP-SLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPIETSG 222 (498)
T ss_pred HHhcChhhhcchhHHHHHHhh-hcchhcccchhhhhhccccccchhccchHhhhcCccccccccchhhhHHhhchhhccc
Confidence 888888888755555566665 688888888888843334788888888888877762 2333444444
Q ss_pred CCCCCEEEccCCcccccCCc--------------------------ccccccccccccccCccceecCCcccccccce-e
Q 041479 319 LLKLQVLSLFENNISREIPS--------------------------SLGNFTFLTELNLCGNSIRGSVPSALGSCHQL-W 371 (771)
Q Consensus 319 l~~L~~L~Ls~N~l~~~~p~--------------------------~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l-~ 371 (771)
..-..-..+.++++..+.+. .|..+++|+.|+|++|+|+++-+.+|.....+ .
T Consensus 223 arc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~e 302 (498)
T KOG4237|consen 223 ARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQE 302 (498)
T ss_pred ceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhh
Confidence 44444444444444332222 34455555666666666655555555555555 5
Q ss_pred eecccCcccCCCCcCCCCCCCCCeEECCCCcccccCCcchhhhhcccccccEEECcCCCCCCCCC
Q 041479 372 LDLSHNHLTGPIPLAVGNPKSIPHLDLSKNELSGEIPSSLAWIFGYISIFAKLNLSYNNLDGDVP 436 (771)
Q Consensus 372 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~l~~L~~L~Ls~N~l~~~~p 436 (771)
|.|..|+|.......|.++.+|+.|+|.+|+|+..-|.+|. .+..|.+|+|-.|++.|.+-
T Consensus 303 L~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~----~~~~l~~l~l~~Np~~CnC~ 363 (498)
T KOG4237|consen 303 LYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQ----TLFSLSTLNLLSNPFNCNCR 363 (498)
T ss_pred hhcCcchHHHHHHHhhhccccceeeeecCCeeEEEeccccc----ccceeeeeehccCcccCccc
Confidence 55555555555555555555555566666665555555433 44555555555555555443
No 419
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.83 E-value=2.5e-21 Score=201.35 Aligned_cols=175 Identities=21% Similarity=0.238 Sum_probs=139.9
Q ss_pred ccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccC------CCCceeEEEEeecCCCCCceeE
Q 041479 525 LNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIR------HRNLVKIITACSTSDFQGNYFR 598 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~------H~nIv~l~~~~~~~~~~~~~~~ 598 (771)
.....|.|+|++|.+|.+...+..||||+|+-. +-..+.=++|+++|++++ --++++|+..|...+ ++
T Consensus 436 V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnN-E~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hkn-----HL 509 (752)
T KOG0670|consen 436 VQGYTGKGVFSTVVRARDQARGQEVAIKIIRNN-EVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKN-----HL 509 (752)
T ss_pred EEeccccceeeeeeeccccCCCCeeEEEEeecc-hHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcc-----ee
Confidence 345679999999999999988889999999644 333466678999999995 248999988887766 89
Q ss_pred EEEEEeccCCCCCCC----c--ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCC-CCceEEecccCcc
Q 041479 599 ALVYEFMHHGSLESC----P--RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN-DMTAHMGDFGLTR 671 (771)
Q Consensus 599 ~lv~e~~~~g~L~~~----~--~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~-~~~~kl~DfGla~ 671 (771)
|||+|-+. -+|.++ + -.|....+..|+.|+..||..|-.. +|+|.||||.|||+.+ ...+||||||.|.
T Consensus 510 ClVFE~Ls-lNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~ 585 (752)
T KOG0670|consen 510 CLVFEPLS-LNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPDNILVNESKNILKLCDFGSAS 585 (752)
T ss_pred EEEehhhh-chHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhc---CeeecccCccceEeccCcceeeeccCcccc
Confidence 99999774 355444 1 2366778899999999999999974 9999999999999985 4578999999998
Q ss_pred ccCcccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCcc
Q 041479 672 FIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDM 715 (771)
Q Consensus 672 ~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~ 715 (771)
........ ...-+..|.||| .||++||+.||+.-|.+-
T Consensus 586 ~~~eneit------PYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~ 638 (752)
T KOG0670|consen 586 FASENEIT------PYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGR 638 (752)
T ss_pred cccccccc------HHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCC
Confidence 76654321 123467899999 399999999999887653
No 420
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.81 E-value=7.1e-21 Score=183.03 Aligned_cols=224 Identities=21% Similarity=0.280 Sum_probs=176.3
Q ss_pred cccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEec
Q 041479 528 SYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFM 605 (771)
Q Consensus 528 ~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~~ 605 (771)
.+.+--.|..|+|+|... .+++|++...+ ....++|..|.-.++.+.||||++++|+|.... ...++..||
T Consensus 197 kl~e~hsgelwrgrwqgn--divakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnspp-----nlv~isq~m 269 (448)
T KOG0195|consen 197 KLAESHSGELWRGRWQGN--DIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPP-----NLVIISQYM 269 (448)
T ss_pred hhccCCCcccccccccCc--chhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCC-----CceEeeeec
Confidence 455666788999999755 46678875543 344578999999999999999999999998775 678999999
Q ss_pred cCCCCCCC-----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEe--cccCccccCcccC
Q 041479 606 HHGSLESC-----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMG--DFGLTRFIPEVMS 678 (771)
Q Consensus 606 ~~g~L~~~-----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~--DfGla~~~~~~~~ 678 (771)
+.|+|+.. .-..+..+.++++.++|+|++|||+. .+-|.--.+.+..|++|++..++|+ |--++-
T Consensus 270 p~gslynvlhe~t~vvvd~sqav~faldiargmaflhsl-ep~ipr~~lns~hvmidedltarismad~kfsf------- 341 (448)
T KOG0195|consen 270 PFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHVMIDEDLTARISMADTKFSF------- 341 (448)
T ss_pred cchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhc-chhhhhhhcccceEEecchhhhheecccceeee-------
Confidence 99999765 22467788999999999999999996 3455556788999999999988876 221111
Q ss_pred Ccccccccccccccccchh------------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCc
Q 041479 679 SNQCSSVGLKGTVGYATPE------------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDP 740 (771)
Q Consensus 679 ~~~~~~~~~~gt~~y~aPE------------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 740 (771)
...+..-+|.||+|| |.+++||+.|++.||.|..+.+. -.++.-.+++..++..+.+
T Consensus 342 ----qe~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmec-gmkialeglrv~ippgis~ 416 (448)
T KOG0195|consen 342 ----QEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMEC-GMKIALEGLRVHIPPGISR 416 (448)
T ss_pred ----eccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhh-hhhhhhccccccCCCCccH
Confidence 112234578899999 89999999999999998655443 2344555666677777788
Q ss_pred cccccCcccChhchhhcCCHHHHHHHHHHhC
Q 041479 741 LFLVGGVQEGEETAEENIKKGQIRESLIAIL 771 (771)
Q Consensus 741 ~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~l 771 (771)
.+...+.-|+..||.+||..+.++..|+++.
T Consensus 417 hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 417 HMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred HHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 7777888999999999999999999999864
No 421
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.80 E-value=1.5e-20 Score=224.97 Aligned_cols=184 Identities=16% Similarity=0.177 Sum_probs=120.8
Q ss_pred ccCC-CCceeEEEEeecCCCCC--ceeEEEEEEeccCCCCCCCc----ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEe
Q 041479 574 NIRH-RNLVKIITACSTSDFQG--NYFRALVYEFMHHGSLESCP----RILSFLRRLNIAIDVASALEYLHHHCKKPIVH 646 (771)
Q Consensus 574 ~l~H-~nIv~l~~~~~~~~~~~--~~~~~lv~e~~~~g~L~~~~----~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivH 646 (771)
.++| +||+++++++......+ ....+.+|||+ +++|.++. ..+++.++..++.||++||+|||+. +|+|
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---gIvH 103 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQ---GIVV 103 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhC---Ceee
Confidence 4556 68888888873322111 12456778987 55887662 3488999999999999999999985 9999
Q ss_pred cCCCCCCeeeCC-------------------CCceEEecccCccccCcccCC------------cccccccccccccccc
Q 041479 647 CDLKPSNVLLDN-------------------DMTAHMGDFGLTRFIPEVMSS------------NQCSSVGLKGTVGYAT 695 (771)
Q Consensus 647 rdlk~~NILl~~-------------------~~~~kl~DfGla~~~~~~~~~------------~~~~~~~~~gt~~y~a 695 (771)
|||||+|||++. ++.+|++|||+++........ ........+||++|||
T Consensus 104 rDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~A 183 (793)
T PLN00181 104 HNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTS 183 (793)
T ss_pred ccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEC
Confidence 999999999954 445666667766542110000 0001112468999999
Q ss_pred hh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCccccccCcccChhchhhcCCH
Q 041479 696 PE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFLVGGVQEGEETAEENIKK 760 (771)
Q Consensus 696 PE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~ 760 (771)
|| |||++|||++|..|+.... ..+..+.....++..... .+.....+.+||+++|.+||||
T Consensus 184 PE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~L~~~P~~Rps~ 259 (793)
T PLN00181 184 PEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKS---RTMSSLRHRVLPPQILLN-WPKEASFCLWLLHPEPSCRPSM 259 (793)
T ss_pred hhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHH---HHHHHHHHhhcChhhhhc-CHHHHHHHHHhCCCChhhCcCh
Confidence 99 7999999999988875321 112222222223211111 1112233458999999999999
Q ss_pred HHHHH
Q 041479 761 GQIRE 765 (771)
Q Consensus 761 ~~vl~ 765 (771)
.|+++
T Consensus 260 ~eil~ 264 (793)
T PLN00181 260 SELLQ 264 (793)
T ss_pred HHHhh
Confidence 99975
No 422
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.80 E-value=4.2e-20 Score=189.46 Aligned_cols=180 Identities=23% Similarity=0.341 Sum_probs=148.2
Q ss_pred cccccccccccceEEEEEecC---CCeEEEEEEeeccchhhHHHHHHHHHHHhccC-CCCceeEEEEeecCCCCCceeEE
Q 041479 524 LLNVSYESLVKATVYKGILDL---DQTFIAVKVLFLHQRGALKSFMAECQALRNIR-HRNLVKIITACSTSDFQGNYFRA 599 (771)
Q Consensus 524 ~~~~~l~~~~~~~Vy~~~~~~---~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~~~~~~ 599 (771)
...-.+|+|.|++||+|.+.. ..+.||+|.+...+. ..+...|++++..+. |.||+++.+++...+ ...
T Consensus 39 ~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~--p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd-----~v~ 111 (418)
T KOG1167|consen 39 KVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS--PSRILNELEMLYRLGGSDNIIKLNGCFRNND-----QVA 111 (418)
T ss_pred hhhccccccchhhhhhhhHhhhccccceEeeeecccccC--chHHHHHHHHHHHhccchhhhcchhhhccCC-----eeE
Confidence 345568999999999999887 778999999976543 467889999999996 999999999987776 789
Q ss_pred EEEEeccCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCC-CCceEEecccCccccCccc-
Q 041479 600 LVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN-DMTAHMGDFGLTRFIPEVM- 677 (771)
Q Consensus 600 lv~e~~~~g~L~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~-~~~~kl~DfGla~~~~~~~- 677 (771)
+|+||+++.+-.++...++..++..+...+..||+++|+. |||||||||+|+|.+. .++-.+.|||+|.......
T Consensus 112 ivlp~~~H~~f~~l~~~l~~~~i~~Yl~~ll~Al~~~h~~---GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~ 188 (418)
T KOG1167|consen 112 IVLPYFEHDRFRDLYRSLSLAEIRWYLRNLLKALAHLHKN---GIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQ 188 (418)
T ss_pred EEecccCccCHHHHHhcCCHHHHHHHHHHHHHHhhhhhcc---CccccCCCccccccccccCCceEEechhHHHHHhhhh
Confidence 9999999988877777888999999999999999999986 9999999999999984 5788999999997211000
Q ss_pred ------------C---------------------------Ccccccccccccccccchh----------------HHHHH
Q 041479 678 ------------S---------------------------SNQCSSVGLKGTVGYATPE----------------YGILL 702 (771)
Q Consensus 678 ------------~---------------------------~~~~~~~~~~gt~~y~aPE----------------~Gv~l 702 (771)
. ..........||++|+||| -||++
T Consensus 189 ~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~ 268 (418)
T KOG1167|consen 189 TEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVIL 268 (418)
T ss_pred hhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeecccee
Confidence 0 0001112456999999999 39999
Q ss_pred HHHHhCCCCCC
Q 041479 703 LEIFTGKRPTS 713 (771)
Q Consensus 703 ~el~tg~~P~~ 713 (771)
+-+++++.||-
T Consensus 269 Lslls~~~PFf 279 (418)
T KOG1167|consen 269 LSLLSRRYPFF 279 (418)
T ss_pred ehhhccccccc
Confidence 99999999984
No 423
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.80 E-value=2.6e-19 Score=175.21 Aligned_cols=135 Identities=17% Similarity=0.081 Sum_probs=104.2
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeeccchh--h-------HHH-----------------HHHHHHHHhccCCCCc
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLHQRG--A-------LKS-----------------FMAECQALRNIRHRNL 580 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~--~-------~~~-----------------~~~E~~~l~~l~H~nI 580 (771)
..+|+|++|.||+|+.+ +++.||||+++..... . ..+ ...|++++.++.|+++
T Consensus 3 ~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 3 GCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 35799999999999997 6779999999754211 0 112 2349999999988776
Q ss_pred eeEEEEeecCCCCCceeEEEEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHH-hcCCCCeEecCCCCCCeee
Q 041479 581 VKIITACSTSDFQGNYFRALVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLH-HHCKKPIVHCDLKPSNVLL 656 (771)
Q Consensus 581 v~l~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH-~~~~~~ivHrdlk~~NILl 656 (771)
.....+... ..++||||++++++... ...++..+...++.|++.+|+|+| +. +|+||||||+||++
T Consensus 82 ~~p~~~~~~-------~~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~---giiHrDlkP~NIli 151 (190)
T cd05147 82 PCPEPILLK-------SHVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDC---RLVHADLSEYNLLY 151 (190)
T ss_pred CCCcEEEec-------CCEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEE
Confidence 443332221 23799999998876543 346788889999999999999995 53 89999999999999
Q ss_pred CCCCceEEecccCcccc
Q 041479 657 DNDMTAHMGDFGLTRFI 673 (771)
Q Consensus 657 ~~~~~~kl~DfGla~~~ 673 (771)
+ ++.++++|||+|...
T Consensus 152 ~-~~~v~LiDFG~a~~~ 167 (190)
T cd05147 152 H-DGKLYIIDVSQSVEH 167 (190)
T ss_pred E-CCcEEEEEccccccC
Confidence 8 478999999999743
No 424
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.78 E-value=1.4e-18 Score=170.82 Aligned_cols=137 Identities=18% Similarity=0.108 Sum_probs=108.4
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeeccchh--------------------------hHHHHHHHHHHHhccCCCCc
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLHQRG--------------------------ALKSFMAECQALRNIRHRNL 580 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~--------------------------~~~~~~~E~~~l~~l~H~nI 580 (771)
..+|+|.+|.||+|++. +++.||||+++..... ....+.+|.+.+.++.|++|
T Consensus 3 ~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 3 GCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred ceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 45899999999999987 6779999999754210 01234689999999999988
Q ss_pred eeEEEEeecCCCCCceeEEEEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHh-cCCCCeEecCCCCCCeee
Q 041479 581 VKIITACSTSDFQGNYFRALVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHH-HCKKPIVHCDLKPSNVLL 656 (771)
Q Consensus 581 v~l~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~-~~~~~ivHrdlk~~NILl 656 (771)
.....+.... .|+||||++++++... ...++..+...++.|++.++.|+|+ . +|+||||||+||++
T Consensus 82 ~~p~~~~~~~-------~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~---givHrDlkP~NIll 151 (190)
T cd05145 82 PVPEPILLKK-------NVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEA---GLVHGDLSEYNILY 151 (190)
T ss_pred CCceEEEecC-------CEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhC---CEecCCCChhhEEE
Confidence 6555443322 3799999998855322 2346777889999999999999998 5 99999999999999
Q ss_pred CCCCceEEecccCccccCc
Q 041479 657 DNDMTAHMGDFGLTRFIPE 675 (771)
Q Consensus 657 ~~~~~~kl~DfGla~~~~~ 675 (771)
+ ++.++++|||+|+....
T Consensus 152 ~-~~~~~liDFG~a~~~~~ 169 (190)
T cd05145 152 H-DGKPYIIDVSQAVELDH 169 (190)
T ss_pred E-CCCEEEEEcccceecCC
Confidence 9 78999999999986543
No 425
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.76 E-value=1.3e-20 Score=169.58 Aligned_cols=131 Identities=23% Similarity=0.427 Sum_probs=66.9
Q ss_pred CCCCCcEEEcCCCcccccCCccccCCCCCCEEecccCcCcccCCcccccCCcccccCCccccCCCCCCEEecccccCcCC
Q 041479 66 NLTFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNALQGQIPDSRLILNKLEGNIPSELGSLLKFKGLGLANNYFTGP 145 (771)
Q Consensus 66 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 145 (771)
++.+.+.|-||+|+++ .+|..++.+.+|+.|++++|+++ .+|..++++++|+.|+++-|++.
T Consensus 31 ~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie---------------~lp~~issl~klr~lnvgmnrl~-- 92 (264)
T KOG0617|consen 31 NMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE---------------ELPTSISSLPKLRILNVGMNRLN-- 92 (264)
T ss_pred chhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh---------------hcChhhhhchhhhheecchhhhh--
Confidence 4445555555555555 34555555555555555555554 45555555555555555555554
Q ss_pred CCccceeeecccccccccCccccCCCCCCEEecccCcCc-ccCChhhhhCCCCCcEEEeecCcccccCCccccCCCCCCE
Q 041479 146 IPHLNMFQVSVYSLTGSIPIQLLNITSMEYFHVSENQLV-GELPPHIGFTLPNVRILLLAGNQFFGNIPHSISNASKLEW 224 (771)
Q Consensus 146 lp~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~-g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 224 (771)
..|..|+.++.|+.|||++|++. ..+|..+| .+..|+.|+|+.|.+. ++|+.++.+++|+.
T Consensus 93 ----------------~lprgfgs~p~levldltynnl~e~~lpgnff-~m~tlralyl~dndfe-~lp~dvg~lt~lqi 154 (264)
T KOG0617|consen 93 ----------------ILPRGFGSFPALEVLDLTYNNLNENSLPGNFF-YMTTLRALYLGDNDFE-ILPPDVGKLTNLQI 154 (264)
T ss_pred ----------------cCccccCCCchhhhhhccccccccccCCcchh-HHHHHHHHHhcCCCcc-cCChhhhhhcceeE
Confidence 44555555555555555555554 23444433 4444444444444444 34444444444444
Q ss_pred EEcccccc
Q 041479 225 LDFANNSL 232 (771)
Q Consensus 225 L~Ls~N~l 232 (771)
|.+..|.+
T Consensus 155 l~lrdndl 162 (264)
T KOG0617|consen 155 LSLRDNDL 162 (264)
T ss_pred EeeccCch
Confidence 44444444
No 426
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.76 E-value=5e-20 Score=197.39 Aligned_cols=265 Identities=22% Similarity=0.253 Sum_probs=149.0
Q ss_pred ccccCCCCCCEEecccCcCcc----cCChhhhhCCCCCcEEEeecCcccc------cCCccccCCCCCCEEEccccccCC
Q 041479 165 IQLLNITSMEYFHVSENQLVG----ELPPHIGFTLPNVRILLLAGNQFFG------NIPHSISNASKLEWLDFANNSLTG 234 (771)
Q Consensus 165 ~~~~~l~~L~~L~Ls~N~l~g----~lp~~~~~~l~~L~~L~L~~N~l~~------~~p~~~~~l~~L~~L~Ls~N~l~~ 234 (771)
..+..+..|+.|+++++.++. .++..+. ..++++.|++++|.+.+ .++..+..+++|+.|++++|.+.+
T Consensus 17 ~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~-~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~~ 95 (319)
T cd00116 17 ELLPKLLCLQVLRLEGNTLGEEAAKALASALR-PQPSLKELCLSLNETGRIPRGLQSLLQGLTKGCGLQELDLSDNALGP 95 (319)
T ss_pred HHHHHHhhccEEeecCCCCcHHHHHHHHHHHh-hCCCceEEeccccccCCcchHHHHHHHHHHhcCceeEEEccCCCCCh
Confidence 344556667788888777742 2343433 55667788887777752 233456667788888888887765
Q ss_pred CCCcCcccccCCCCCcEEEccCccccc----cCChhhhhcccccceeecccCcCccc----CcccccccCCcceEecCCc
Q 041479 235 LIPEDLDSLVNCTYLEVVSLSVNSLSG----TLPNSLANFSSHLRYLYMSANPISGS----IPTEIGNLKNLIIIAIEKF 306 (771)
Q Consensus 235 ~~p~~~~~l~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~l~~n 306 (771)
..+..+..+...++|++|++++|++++ .+...+..+.++|+.|++++|.+++. ++..+..+++|+.|++++|
T Consensus 96 ~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n 175 (319)
T cd00116 96 DGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANN 175 (319)
T ss_pred hHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCC
Confidence 544444322221447888888887762 22233344423678888888877732 2334556667777777777
Q ss_pred ccee----ccCccccCCCCCCEEEccCCccccc----CCcccccccccccccccCccceecCCccccc-----ccce-ee
Q 041479 307 ILIR----NIPISVGYLLKLQVLSLFENNISRE----IPSSLGNFTFLTELNLCGNSIRGSVPSALGS-----CHQL-WL 372 (771)
Q Consensus 307 ~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-----l~~l-~L 372 (771)
.+.+ .++..+..+++|+.|++++|.+++. ++..+..+++|++|++++|.+++.....+.. ...| .|
T Consensus 176 ~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L 255 (319)
T cd00116 176 GIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTL 255 (319)
T ss_pred CCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEE
Confidence 7653 2333445556777777777777532 2334455667777777777776422222211 1334 55
Q ss_pred ecccCcccC----CCCcCCCCCCCCCeEECCCCcccccCCcchhhhhccc-ccccEEECcCCC
Q 041479 373 DLSHNHLTG----PIPLAVGNPKSIPHLDLSKNELSGEIPSSLAWIFGYI-SIFAKLNLSYNN 430 (771)
Q Consensus 373 ~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~l-~~L~~L~Ls~N~ 430 (771)
++++|.++. .+...+..+++|+++++++|.++..-...++...... +.|+.|++.+|+
T Consensus 256 ~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (319)
T cd00116 256 SLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKDDS 318 (319)
T ss_pred EccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCCCC
Confidence 555555541 1122333445566666666666533222222222222 455555555554
No 427
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.75 E-value=2.2e-18 Score=167.51 Aligned_cols=136 Identities=18% Similarity=0.122 Sum_probs=103.4
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCccccccccccccccc
Q 041479 615 RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYA 694 (771)
Q Consensus 615 ~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~ 694 (771)
..+++.++..++.|++.||+|||+. + ||+||+++.++.+|+ ||+++...... ..||+.||
T Consensus 12 ~~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~~~~~~~---------~~g~~~y~ 71 (176)
T smart00750 12 RPLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVAFKTPEQ---------SRVDPYFM 71 (176)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceEeecccc---------CCCccccc
Confidence 3589999999999999999999986 3 999999999999999 99988654321 25899999
Q ss_pred chh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCC-----chhhhcCc--cccccCcccChh
Q 041479 695 TPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPD-----QILQVLDP--LFLVGGVQEGEE 752 (771)
Q Consensus 695 aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~--~~~~~~~~cl~~ 752 (771)
||| |||++|||+||+.||.+.......+..+.....+. .....+.. .+.....+||..
T Consensus 72 aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~ 151 (176)
T smart00750 72 APEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADFMRVCASR 151 (176)
T ss_pred ChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHHHHHHHhc
Confidence 999 69999999999999976433333333443333322 11122222 455667799999
Q ss_pred chhhcCCHHHHHHHHHHh
Q 041479 753 TAEENIKKGQIRESLIAI 770 (771)
Q Consensus 753 ~p~~Rpt~~~vl~~L~~~ 770 (771)
+|++|||+.++++.+..+
T Consensus 152 ~p~~Rp~~~~ll~~~~~~ 169 (176)
T smart00750 152 LPQRREAANHYLAHCRAL 169 (176)
T ss_pred ccccccCHHHHHHHHHHH
Confidence 999999999999987643
No 428
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.75 E-value=2e-20 Score=168.41 Aligned_cols=159 Identities=31% Similarity=0.516 Sum_probs=147.1
Q ss_pred CcEEEEEcCCCCCcccCCccccCCCCCcEEEcCCCcccccCCccccCCCCCCEEecccCcCcccCCcccccCCcccccCC
Q 041479 44 QRVILLNLSGQNLTGTASPYIGNLTFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNALQGQIPDSRLILNKLEGNIP 123 (771)
Q Consensus 44 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~l~~n~l~~~~p 123 (771)
.+++.|-||+|+++ ..|+.+..|.+|+.|++++|+|. .+|..++++++|+.|+++-|++. .+|
T Consensus 33 s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~---------------~lp 95 (264)
T KOG0617|consen 33 SNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN---------------ILP 95 (264)
T ss_pred hhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh---------------cCc
Confidence 68899999999999 77889999999999999999999 48999999999999999999987 889
Q ss_pred ccccCCCCCCEEecccccCcCCCCccceeeecccccccccCccccCCCCCCEEecccCcCcccCChhhhhCCCCCcEEEe
Q 041479 124 SELGSLLKFKGLGLANNYFTGPIPHLNMFQVSVYSLTGSIPIQLLNITSMEYFHVSENQLVGELPPHIGFTLPNVRILLL 203 (771)
Q Consensus 124 ~~~~~l~~L~~L~Ls~N~l~~~lp~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L 203 (771)
..|++++.|+.|||.+|.+.+ ..+|..|..++.|+.|+|++|.+. .+|+.++ .+++|+.|.+
T Consensus 96 rgfgs~p~levldltynnl~e----------------~~lpgnff~m~tlralyl~dndfe-~lp~dvg-~lt~lqil~l 157 (264)
T KOG0617|consen 96 RGFGSFPALEVLDLTYNNLNE----------------NSLPGNFFYMTTLRALYLGDNDFE-ILPPDVG-KLTNLQILSL 157 (264)
T ss_pred cccCCCchhhhhhcccccccc----------------ccCCcchhHHHHHHHHHhcCCCcc-cCChhhh-hhcceeEEee
Confidence 999999999999999998873 267888999999999999999999 9999998 9999999999
Q ss_pred ecCcccccCCccccCCCCCCEEEccccccCCCCCc
Q 041479 204 AGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPE 238 (771)
Q Consensus 204 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 238 (771)
..|.+- ..|..++.++.|++|++.+|+++-++|+
T Consensus 158 rdndll-~lpkeig~lt~lrelhiqgnrl~vlppe 191 (264)
T KOG0617|consen 158 RDNDLL-SLPKEIGDLTRLRELHIQGNRLTVLPPE 191 (264)
T ss_pred ccCchh-hCcHHHHHHHHHHHHhcccceeeecChh
Confidence 999998 6899999999999999999999866553
No 429
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.73 E-value=1.7e-19 Score=193.28 Aligned_cols=259 Identities=19% Similarity=0.241 Sum_probs=128.9
Q ss_pred EEEcCCCCCcc-cCCccccCCCCCcEEEcCCCcccc----cCCccccCCCCCCEEecccCcCcccCCcccccCCcccccC
Q 041479 48 LLNLSGQNLTG-TASPYIGNLTFLRLINLQQNNFSS----NIPHEIGRLFRLRHIIFNSNALQGQIPDSRLILNKLEGNI 122 (771)
Q Consensus 48 ~L~Ls~n~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~l~~n~l~~~~ 122 (771)
.|+|..+++++ .....|..+++|+.|+++++.++. .++..+...++|++|+++++.+.+ .+. .-..+
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~-~~~-------~~~~~ 73 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGR-IPR-------GLQSL 73 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCC-cch-------HHHHH
Confidence 36777777763 344556677778888888887743 245556667777788877776542 011 01123
Q ss_pred CccccCCCCCCEEecccccCcCCCCccceeeecccccccccCccccCC---CCCCEEecccCcCcc----cCChhhhhCC
Q 041479 123 PSELGSLLKFKGLGLANNYFTGPIPHLNMFQVSVYSLTGSIPIQLLNI---TSMEYFHVSENQLVG----ELPPHIGFTL 195 (771)
Q Consensus 123 p~~~~~l~~L~~L~Ls~N~l~~~lp~L~~l~l~~n~l~~~~p~~~~~l---~~L~~L~Ls~N~l~g----~lp~~~~~~l 195 (771)
+..+..+++|+.|++++|.+.+ ..+..+..+ ++|++|++++|++++ .+...+. .+
T Consensus 74 ~~~l~~~~~L~~L~l~~~~~~~-----------------~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~-~~ 135 (319)
T cd00116 74 LQGLTKGCGLQELDLSDNALGP-----------------DGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLK-DL 135 (319)
T ss_pred HHHHHhcCceeEEEccCCCCCh-----------------hHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHH-hC
Confidence 4455566677777777776652 111122222 336666666666652 1112222 33
Q ss_pred -CCCcEEEeecCcccc----cCCccccCCCCCCEEEccccccCCCCCc-CcccccCCCCCcEEEccCccccccC----Ch
Q 041479 196 -PNVRILLLAGNQFFG----NIPHSISNASKLEWLDFANNSLTGLIPE-DLDSLVNCTYLEVVSLSVNSLSGTL----PN 265 (771)
Q Consensus 196 -~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~l~~L~~L~Ls~N~l~~~~----p~ 265 (771)
++|+.|++++|.+++ .++..+..+++|++|++++|.+++.... ....+..+++|+.|++++|.+++.. +.
T Consensus 136 ~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~ 215 (319)
T cd00116 136 PPALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAE 215 (319)
T ss_pred CCCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHH
Confidence 566666666666652 1233445555666666666666531100 0111233456666666666654221 12
Q ss_pred hhhhcccccceeecccCcCcccCcccccc-----cCCcceEecCCccce----eccCccccCCCCCCEEEccCCccc
Q 041479 266 SLANFSSHLRYLYMSANPISGSIPTEIGN-----LKNLIIIAIEKFILI----RNIPISVGYLLKLQVLSLFENNIS 333 (771)
Q Consensus 266 ~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~-----l~~L~~L~l~~n~l~----~~~p~~~~~l~~L~~L~Ls~N~l~ 333 (771)
.+..+ ++|++|++++|.+++.....+.. .+.|+.|++++|.+. ..+...+..+++|+.+++++|.++
T Consensus 216 ~~~~~-~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~ 291 (319)
T cd00116 216 TLASL-KSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFG 291 (319)
T ss_pred Hhccc-CCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCc
Confidence 22222 24666666666555322211111 234444444444443 112223333345555555555554
No 430
>PRK10345 hypothetical protein; Provisional
Probab=99.72 E-value=1.9e-17 Score=163.52 Aligned_cols=136 Identities=16% Similarity=0.177 Sum_probs=104.5
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhcc-----CCCCceeEEEEeecCCCCCceeEEE
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNI-----RHRNLVKIITACSTSDFQGNYFRAL 600 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-----~H~nIv~l~~~~~~~~~~~~~~~~l 600 (771)
...+|+|.++.||. ++.+... +||++........+++.+|+++++.+ .||||++++|++.+....+ ....+
T Consensus 7 ~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g-~v~~~ 82 (210)
T PRK10345 7 QSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTG-YVYDV 82 (210)
T ss_pred cceecCCCceEEEE--CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCe-EEEEE
Confidence 45689999999995 7766644 79999766555567899999999999 5799999999998763211 22348
Q ss_pred EEEe--ccCCCCCCCcc--cCCHHHHHHHHHHHHHHH-HHHHhcCCCCeEecCCCCCCeeeCC----CCceEEecccCc
Q 041479 601 VYEF--MHHGSLESCPR--ILSFLRRLNIAIDVASAL-EYLHHHCKKPIVHCDLKPSNVLLDN----DMTAHMGDFGLT 670 (771)
Q Consensus 601 v~e~--~~~g~L~~~~~--~l~~~~~~~i~~~ia~gL-~~LH~~~~~~ivHrdlk~~NILl~~----~~~~kl~DfGla 670 (771)
|+|| +++|+|.++.+ .+++. ..++.+++.++ +|||++ +|+||||||+|||++. ++.++|+||+-+
T Consensus 83 I~e~~G~~~~tL~~~l~~~~~~e~--~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~ 156 (210)
T PRK10345 83 IADFDGKPSITLTEFAEQCRYEED--VAQLRQLLKKLKRYLLDN---RIVTMELKPQNILCQRISESEVIPVVCDNIGE 156 (210)
T ss_pred EecCCCCcchhHHHHHHcccccHh--HHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEeccCCCCCcEEEEECCCC
Confidence 8999 55789987732 34443 45677888777 999996 8999999999999974 347999994434
No 431
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.71 E-value=6.8e-17 Score=156.10 Aligned_cols=169 Identities=18% Similarity=0.052 Sum_probs=123.8
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeeccch----hhHHHHHHHHHHHhccC-CCCceeEEEEeecCCCCCceeEEE
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLHQR----GALKSFMAECQALRNIR-HRNLVKIITACSTSDFQGNYFRAL 600 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~----~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~~~~~~l 600 (771)
.-.++.++||+||.+.. ++..|+.+.+..... -....|.+|+++|++++ |++|.+++++ + ..|+
T Consensus 7 ~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~-----~~~l 75 (218)
T PRK12274 7 NEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----D-----GRHL 75 (218)
T ss_pred ceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----c-----CEEE
Confidence 45678999999997654 454777676643321 11235889999999995 5889999886 1 3589
Q ss_pred EEEeccCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCC-CCCCeeeCCCCceEEecccCccccCcccCC
Q 041479 601 VYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDL-KPSNVLLDNDMTAHMGDFGLTRFIPEVMSS 679 (771)
Q Consensus 601 v~e~~~~g~L~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdl-k~~NILl~~~~~~kl~DfGla~~~~~~~~~ 679 (771)
+|||+.|.+|.+.. +. ....++.|++.+++++|++ +|+|||| ||+|||++.++.++|+|||+|.........
T Consensus 76 vmeyI~G~~L~~~~---~~-~~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~ 148 (218)
T PRK12274 76 DRSYLAGAAMYQRP---PR-GDLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARW 148 (218)
T ss_pred EEeeecCccHHhhh---hh-hhHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchH
Confidence 99999999986542 11 2346788999999999996 9999999 799999999999999999999854432210
Q ss_pred ----ccc-----ccccccccccccchh-----------------HHHHHHHHHhCCCCC
Q 041479 680 ----NQC-----SSVGLKGTVGYATPE-----------------YGILLLEIFTGKRPT 712 (771)
Q Consensus 680 ----~~~-----~~~~~~gt~~y~aPE-----------------~Gv~l~el~tg~~P~ 712 (771)
... ...-...++.|++|+ -|.-+|.++|+..|.
T Consensus 149 ~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~ 207 (218)
T PRK12274 149 MRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLH 207 (218)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCc
Confidence 000 000123678899997 399999999987765
No 432
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.71 E-value=1.7e-18 Score=196.53 Aligned_cols=231 Identities=19% Similarity=0.145 Sum_probs=163.9
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeec---c--c-hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEE
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFL---H--Q-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRA 599 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~---~--~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 599 (771)
..-+|+|.+|.|+........+.++.|.... . . ......+..|..+-..++|||++..+..+.+.. ..+
T Consensus 323 ~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~-----~~~ 397 (601)
T KOG0590|consen 323 GRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEID-----GIL 397 (601)
T ss_pred cceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcc-----cch
Confidence 3446778888777777666665566665431 1 1 122233677888888999999988877765544 233
Q ss_pred EEEEeccCCCCCCCc---ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcc
Q 041479 600 LVYEFMHHGSLESCP---RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676 (771)
Q Consensus 600 lv~e~~~~g~L~~~~---~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~ 676 (771)
-+||||++ ||..+. ..+...++..++.|+..|+.|+|+. ||.|||+|++|+++..+|.+||+|||.+....-.
T Consensus 398 ~~mE~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~---GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~ 473 (601)
T KOG0590|consen 398 QSMEYCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSM---GLAHRDLKLENLLVTENGILKIIDFGAASVFRYP 473 (601)
T ss_pred hhhhcccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhc---CceeccCccccEEEecCCceEEeecCcceeeccC
Confidence 44999999 997772 2588889999999999999999996 9999999999999999999999999999866544
Q ss_pred cCCcccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhC------CCch
Q 041479 677 MSSNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMAL------PDQI 734 (771)
Q Consensus 677 ~~~~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~------~~~~ 734 (771)
.........+.+|+-.|+||| -|+++..|.+|+.||.........+.+...... +..+
T Consensus 474 ~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~ 553 (601)
T KOG0590|consen 474 WEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNRL 553 (601)
T ss_pred cchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccChHHH
Confidence 443345667889999999999 399999999999998543322221111110000 1112
Q ss_pred hhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 735 LQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 735 ~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
...+....+..+.++++.||.+|.||.+|++
T Consensus 554 ~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 554 LSLLPRETRIIIYRMLQLDPTKRITIEQILN 584 (601)
T ss_pred HHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence 2222222223344889999999999999985
No 433
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.70 E-value=1.8e-16 Score=169.46 Aligned_cols=238 Identities=22% Similarity=0.182 Sum_probs=165.3
Q ss_pred ccccccccccccceEEEEEecCCC-eEEEEEEeeccchhhHHHHHHHHHHHhccCC----CCceeEEEEee-cCCCCCce
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQ-TFIAVKVLFLHQRGALKSFMAECQALRNIRH----RNLVKIITACS-TSDFQGNY 596 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~-~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H----~nIv~l~~~~~-~~~~~~~~ 596 (771)
+.....+|+|.+|.||++....++ ..+|+|............+..|+.++..+.+ +++..+++... ...
T Consensus 20 ~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~----- 94 (322)
T KOG1164|consen 20 YKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTED----- 94 (322)
T ss_pred eEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCc-----
Confidence 445567899999999999987764 6889998865533322378889999998873 68899988874 444
Q ss_pred eEEEEEEeccCCCCCCC-----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCC-----CceEEec
Q 041479 597 FRALVYEFMHHGSLESC-----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDND-----MTAHMGD 666 (771)
Q Consensus 597 ~~~lv~e~~~~g~L~~~-----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~-----~~~kl~D 666 (771)
+.|+||+.+ |.+|.++ .+.++..+..+|+.|+..+|+++|+. |++||||||+|+++... ..+.+.|
T Consensus 95 ~~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~~~~~~~~~~~llD 170 (322)
T KOG1164|consen 95 FNFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQSSRSEVRTLYLLD 170 (322)
T ss_pred eeEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecCCCCcccceEEEEe
Confidence 679999987 7788765 26788999999999999999999985 99999999999999754 4699999
Q ss_pred ccCccccC--cccCC--ccc-c-cccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHH
Q 041479 667 FGLTRFIP--EVMSS--NQC-S-SVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNF 725 (771)
Q Consensus 667 fGla~~~~--~~~~~--~~~-~-~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~ 725 (771)
||+|+... ..... ... . .....||..|+++. ++-++.|+..|..||....... ...+.
T Consensus 171 fGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~-~~~~~ 249 (322)
T KOG1164|consen 171 FGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTD-LKSKF 249 (322)
T ss_pred cCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccc-hHHHH
Confidence 99998332 21111 111 1 23466999999997 6888999999999996543211 12222
Q ss_pred HHhhCCCchh---hhcCccccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 726 VKMALPDQIL---QVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 726 ~~~~~~~~~~---~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
.......... ......+......+-..+...+|....+...++++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~ 297 (322)
T KOG1164|consen 250 EKDPRKLLTDRFGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDV 297 (322)
T ss_pred HHHhhhhccccccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHH
Confidence 1111111111 11111222222233346888899888888877653
No 434
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.68 E-value=9e-17 Score=152.71 Aligned_cols=183 Identities=23% Similarity=0.308 Sum_probs=144.1
Q ss_pred ccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCC-CCceeEEEEeecCCCCCceeEEEEEE
Q 041479 525 LNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRH-RNLVKIITACSTSDFQGNYFRALVYE 603 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H-~nIv~l~~~~~~~~~~~~~~~~lv~e 603 (771)
..-.+|+|+||.+|.|..-..++.||||+-..... ..++..|..+.+.++| ..|-.+..|..+.+ +-.+|||
T Consensus 19 lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~--hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~-----ynvlVMd 91 (341)
T KOG1163|consen 19 LVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK--HPQLLYESKVYRILQGGVGIPHIRHYGTEKD-----YNVLVMD 91 (341)
T ss_pred EEEeecCCchhheeeeeeccCCceEEEEeecccCC--CcchhHHHHHHHHhccCCCCchhhhhccccc-----cceeeee
Confidence 34568999999999999999999999998754322 2467789999999975 56666666666665 4589999
Q ss_pred eccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeC---CCCceEEecccCccccCcc
Q 041479 604 FMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD---NDMTAHMGDFGLTRFIPEV 676 (771)
Q Consensus 604 ~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~---~~~~~kl~DfGla~~~~~~ 676 (771)
.. |.+|++. .+.++..+++-.+-|+..-++|+|.. +++||||||+|.|.. ...++.++|||+|+.+.+.
T Consensus 92 LL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~ 167 (341)
T KOG1163|consen 92 LL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDI 167 (341)
T ss_pred cc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhh---ccccccCCccceeeccccccceEEEEeccchhhhccc
Confidence 88 7788775 67788999999999999999999985 899999999999995 3457999999999877554
Q ss_pred cCCc---ccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccC
Q 041479 677 MSSN---QCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTE 718 (771)
Q Consensus 677 ~~~~---~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~ 718 (771)
.+.. ........||..|.+-- .|-++...-.|..||.++.+.
T Consensus 168 ~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~ 227 (341)
T KOG1163|consen 168 RTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAA 227 (341)
T ss_pred cccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchh
Confidence 3322 22334567999998764 588888888899999886543
No 435
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.67 E-value=9e-16 Score=164.26 Aligned_cols=228 Identities=27% Similarity=0.327 Sum_probs=167.8
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeeccchh---hHHHHHHHHHHHhccCCC-CceeEEEEeecCCCCCceeEEEEE
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLHQRG---ALKSFMAECQALRNIRHR-NLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~---~~~~~~~E~~~l~~l~H~-nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
..+|.|.++.||++.+. ..+|+|.+...... ....+.+|+.+++.+.|+ +|+++.+++.... ..++++
T Consensus 6 ~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~-----~~~~~~ 77 (384)
T COG0515 6 RKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEG-----SLYLVM 77 (384)
T ss_pred EeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCC-----EEEEEE
Confidence 35678999999999987 58999999655432 467899999999999988 7999999985554 469999
Q ss_pred EeccCCCCCCCcc------cCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCC-ceEEecccCccccCc
Q 041479 603 EFMHHGSLESCPR------ILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDM-TAHMGDFGLTRFIPE 675 (771)
Q Consensus 603 e~~~~g~L~~~~~------~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~-~~kl~DfGla~~~~~ 675 (771)
||+.++++.+... .+.......+..|++.+++|+|+. +++|||+||+||+++..+ .++++|||.++....
T Consensus 78 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~ 154 (384)
T COG0515 78 EYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPD 154 (384)
T ss_pred ecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeecCCCCeEEEeccCcceecCC
Confidence 9999999975521 578889999999999999999986 799999999999999888 799999999985544
Q ss_pred ccCCcc--cccccccccccccchh------------------HHHHHHHHHhCCCCCCccccC--CccHHHHHHhhCCCc
Q 041479 676 VMSSNQ--CSSVGLKGTVGYATPE------------------YGILLLEIFTGKRPTSDMFTE--GLDLHNFVKMALPDQ 733 (771)
Q Consensus 676 ~~~~~~--~~~~~~~gt~~y~aPE------------------~Gv~l~el~tg~~P~~~~~~~--~~~~~~~~~~~~~~~ 733 (771)
...... .......||..|+||| +|++++++++|..|+...... .....+.........
T Consensus 155 ~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 234 (384)
T COG0515 155 PGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPS 234 (384)
T ss_pred CCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcc
Confidence 332111 1234567999999999 489999999999997543221 111222222222110
Q ss_pred hhhhcC--------ccccccCcccChhchhhcCCHHHHHH
Q 041479 734 ILQVLD--------PLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 734 ~~~~~~--------~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
...... ..+......|+..+|..|.++.+...
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~ 274 (384)
T COG0515 235 LASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLS 274 (384)
T ss_pred cccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhh
Confidence 111111 12223444888889999998887654
No 436
>smart00090 RIO RIO-like kinase.
Probab=99.66 E-value=9.6e-16 Score=155.27 Aligned_cols=135 Identities=19% Similarity=0.123 Sum_probs=103.9
Q ss_pred ccccccccceEEEEE-ecCCCeEEEEEEeeccchh------------------------hHHHHHHHHHHHhccCCC--C
Q 041479 527 VSYESLVKATVYKGI-LDLDQTFIAVKVLFLHQRG------------------------ALKSFMAECQALRNIRHR--N 579 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~-~~~~~~~vAvK~~~~~~~~------------------------~~~~~~~E~~~l~~l~H~--n 579 (771)
..+|+|.+|.||+|+ ...+++.||||+++..... ....+.+|++++.++.+. .
T Consensus 34 ~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~~~i~ 113 (237)
T smart00090 34 GCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYEAGVP 113 (237)
T ss_pred CeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 458999999999998 5567779999999654210 113467899999999763 3
Q ss_pred ceeEEEEeecCCCCCceeEEEEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCC-eEecCCCCCCee
Q 041479 580 LVKIITACSTSDFQGNYFRALVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKP-IVHCDLKPSNVL 655 (771)
Q Consensus 580 Iv~l~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~-ivHrdlk~~NIL 655 (771)
+.+.+++ . ..++||||++++++... .......+...++.|++.+++|||+. + |+|||+||+||+
T Consensus 114 ~p~~~~~---~------~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---g~iiH~Dikp~NIl 181 (237)
T smart00090 114 VPKPIAW---R------RNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKE---GELVHGDLSEYNIL 181 (237)
T ss_pred CCeeeEe---c------CceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhc---CCEEeCCCChhhEE
Confidence 3444442 1 23799999999888654 12344555678999999999999986 7 999999999999
Q ss_pred eCCCCceEEecccCccccC
Q 041479 656 LDNDMTAHMGDFGLTRFIP 674 (771)
Q Consensus 656 l~~~~~~kl~DfGla~~~~ 674 (771)
++ +++++++|||.|....
T Consensus 182 i~-~~~i~LiDFg~a~~~~ 199 (237)
T smart00090 182 VH-DGKVVIIDVSQSVELD 199 (237)
T ss_pred EE-CCCEEEEEChhhhccC
Confidence 99 8899999999987543
No 437
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.63 E-value=1.1e-15 Score=151.93 Aligned_cols=180 Identities=18% Similarity=0.256 Sum_probs=144.5
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccC-CCCceeEEEEeecCCCCCceeEEEEEEec
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIR-HRNLVKIITACSTSDFQGNYFRALVYEFM 605 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~~~~~~lv~e~~ 605 (771)
..+|+|.||.++.|+.--.++.||||.-...++ ..++..|.+..+.+. .+.|-..+.|..++- +-.||||.+
T Consensus 34 kKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~--APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~-----~NiLVidLL 106 (449)
T KOG1165|consen 34 KKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSE--APQLRDEYRTYKLLGGTEGIPQVYYFGQEGK-----YNILVIDLL 106 (449)
T ss_pred cccccCcceeeecccccccCceEEEEeccccCC--cchHHHHHHHHHHHcCCCCCCceeeeccccc-----hhhhhhhhh
Confidence 357999999999999988899999998755443 246667888877775 688888877755544 457999988
Q ss_pred cCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCC-----CceEEecccCccccCcc
Q 041479 606 HHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDND-----MTAHMGDFGLTRFIPEV 676 (771)
Q Consensus 606 ~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~-----~~~kl~DfGla~~~~~~ 676 (771)
|.+|+++ .+.++...+.-||.|+..-++|+|+. .+|.|||||+|.||..- ..+.|+|||+|+.+.+.
T Consensus 107 -GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp 182 (449)
T KOG1165|consen 107 -GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDP 182 (449)
T ss_pred -CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCCCCCCceEEEEeccchhhhcCc
Confidence 7788775 77899999999999999999999985 89999999999999643 35899999999987554
Q ss_pred cCCc---ccccccccccccccchh---------------HHHHHHHHHhCCCCCCcccc
Q 041479 677 MSSN---QCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFT 717 (771)
Q Consensus 677 ~~~~---~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~ 717 (771)
.+.. ........||.+||+-- +|-++++.+.|..||.+.-+
T Consensus 183 ~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA 241 (449)
T KOG1165|consen 183 KTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKA 241 (449)
T ss_pred cccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccC
Confidence 3322 22334567999999974 79999999999999987543
No 438
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.63 E-value=1.3e-15 Score=152.87 Aligned_cols=134 Identities=19% Similarity=0.213 Sum_probs=108.2
Q ss_pred cccccccceEEEEEecCCCeEEEEEEeeccc--------hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEE
Q 041479 528 SYESLVKATVYKGILDLDQTFIAVKVLFLHQ--------RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRA 599 (771)
Q Consensus 528 ~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--------~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 599 (771)
.+|+|.+|.||+|++ .+..|+||+..... .....++.+|++++..++|++|.....++...+ ..+
T Consensus 3 ~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~-----~~~ 75 (211)
T PRK14879 3 LIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPE-----NFI 75 (211)
T ss_pred ccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCC-----CCE
Confidence 479999999999988 34479999864322 112356889999999999999887776665544 458
Q ss_pred EEEEeccCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCcccc
Q 041479 600 LVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673 (771)
Q Consensus 600 lv~e~~~~g~L~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~ 673 (771)
+||||++|++|.+......+ ++..++.+++.++.++|+. +++|||++|+||+++ ++.++++|||.++..
T Consensus 76 lv~e~~~G~~L~~~~~~~~~-~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~~ 144 (211)
T PRK14879 76 IVMEYIEGEPLKDLINSNGM-EELELSREIGRLVGKLHSA---GIIHGDLTTSNMILS-GGKIYLIDFGLAEFS 144 (211)
T ss_pred EEEEEeCCcCHHHHHHhccH-HHHHHHHHHHHHHHHHHhC---CcccCCCCcccEEEE-CCCEEEEECCcccCC
Confidence 99999999999776433333 7789999999999999986 899999999999999 788999999998753
No 439
>PLN03150 hypothetical protein; Provisional
Probab=99.60 E-value=3.6e-15 Score=172.09 Aligned_cols=123 Identities=31% Similarity=0.515 Sum_probs=89.7
Q ss_pred ccHHHHHHHHhcCCCCCCCCCCCCCCCCCCc-----cceeeeecCCC----CcEEEEEcCCCCCcccCCccccCCCCCcE
Q 041479 2 PDKQALLAFKSKVDDDPFGALSTWNDSVNFC-----QWLGVTCSLKY----QRVILLNLSGQNLTGTASPYIGNLTFLRL 72 (771)
Q Consensus 2 ~~~~~l~~~~~~~~~~~~~~~~~w~~~~~~c-----~w~~v~c~~~~----~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~ 72 (771)
.|.+||+++|+.+. ++. ..+|.. ++| .|.||.|.... ..++.|+|++|.++|.+|+.|+.+++|+.
T Consensus 372 ~~~~aL~~~k~~~~-~~~--~~~W~g--~~C~p~~~~w~Gv~C~~~~~~~~~~v~~L~L~~n~L~g~ip~~i~~L~~L~~ 446 (623)
T PLN03150 372 EEVSALQTLKSSLG-LPL--RFGWNG--DPCVPQQHPWSGADCQFDSTKGKWFIDGLGLDNQGLRGFIPNDISKLRHLQS 446 (623)
T ss_pred hHHHHHHHHHHhcC-Ccc--cCCCCC--CCCCCcccccccceeeccCCCCceEEEEEECCCCCccccCCHHHhCCCCCCE
Confidence 57899999999984 332 248953 444 79999996321 24888888888888888888888888888
Q ss_pred EEcCCCcccccCCccccCCCCCCEEecccCcCcccCCcccccCCcccccCCccccCCCCCCEEecccccCc
Q 041479 73 INLQQNNFSSNIPHEIGRLFRLRHIIFNSNALQGQIPDSRLILNKLEGNIPSELGSLLKFKGLGLANNYFT 143 (771)
Q Consensus 73 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 143 (771)
|+|++|+|++.+|..|+.+++|+.|+|++|+++ |.+|+.++++++|+.|+|++|+++
T Consensus 447 L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~ls--------------g~iP~~l~~L~~L~~L~Ls~N~l~ 503 (623)
T PLN03150 447 INLSGNSIRGNIPPSLGSITSLEVLDLSYNSFN--------------GSIPESLGQLTSLRILNLNGNSLS 503 (623)
T ss_pred EECCCCcccCcCChHHhCCCCCCEEECCCCCCC--------------CCCchHHhcCCCCCEEECcCCccc
Confidence 888888888888888888888888888888754 344545555555555555554444
No 440
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.60 E-value=6e-15 Score=146.23 Aligned_cols=132 Identities=19% Similarity=0.146 Sum_probs=102.9
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeeccch----------------------hhHHHHHHHHHHHhccCCC--Ccee
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLHQR----------------------GALKSFMAECQALRNIRHR--NLVK 582 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~----------------------~~~~~~~~E~~~l~~l~H~--nIv~ 582 (771)
-.+|+|.+|.||++..+ +++.||||++..... .....+.+|+.++.++.|+ .+.+
T Consensus 21 ~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~v~~ 99 (198)
T cd05144 21 NQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFPVPK 99 (198)
T ss_pred CccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCCCCc
Confidence 45899999999999886 566999998764321 0112467899999999887 4444
Q ss_pred EEEEeecCCCCCceeEEEEEEeccCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCce
Q 041479 583 IITACSTSDFQGNYFRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTA 662 (771)
Q Consensus 583 l~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~ 662 (771)
.++. . ..++||||++++++...... .....++.+++.++.++|+. +|+||||||+||+++.++.+
T Consensus 100 ~~~~----~-----~~~lv~e~~~g~~L~~~~~~---~~~~~~~~~i~~~l~~lh~~---gi~H~Dl~p~Nill~~~~~~ 164 (198)
T cd05144 100 PIDW----N-----RHAVVMEYIDGVELYRVRVL---EDPEEVLDEILEEIVKAYKH---GIIHGDLSEFNILVDDDEKI 164 (198)
T ss_pred eeec----C-----CceEEEEEeCCcchhhcccc---ccHHHHHHHHHHHHHHHHHC---CCCcCCCCcccEEEcCCCcE
Confidence 4432 1 34899999999998765321 34567889999999999985 99999999999999999999
Q ss_pred EEecccCccccC
Q 041479 663 HMGDFGLTRFIP 674 (771)
Q Consensus 663 kl~DfGla~~~~ 674 (771)
+|+|||.+....
T Consensus 165 ~liDfg~~~~~~ 176 (198)
T cd05144 165 YIIDWPQMVSTD 176 (198)
T ss_pred EEEECCccccCC
Confidence 999999996443
No 441
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.59 E-value=5.9e-15 Score=146.04 Aligned_cols=137 Identities=15% Similarity=0.154 Sum_probs=105.5
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeeccch---hhHHH------HHHHHHHHhccCCCCceeEEEEeecCCCCC--
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLHQR---GALKS------FMAECQALRNIRHRNLVKIITACSTSDFQG-- 594 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~---~~~~~------~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~-- 594 (771)
.-.+++|.+|.||.+.. + +..+|||.+..... ...+. +.+|++.+.+++||+|....+++.......
T Consensus 36 ~~~l~~~~f~~v~l~~~-~-~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~~~~~~ 113 (232)
T PRK10359 36 IKVFRNIDDTKVSLIDT-D-YGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAERKTLR 113 (232)
T ss_pred EEEecCCCceEEEEEec-C-CCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeeccccccc
Confidence 34578999999999654 3 44899999965432 22223 689999999999999999999866443211
Q ss_pred -ceeEEEEEEeccCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCcccc
Q 041479 595 -NYFRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673 (771)
Q Consensus 595 -~~~~~lv~e~~~~g~L~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~ 673 (771)
....++||||++|.+|.+... ++. ....+++.++..+|+. +++|||+||+||+++.++ ++++|||..+..
T Consensus 114 ~~~~~~lvmEyi~G~tL~~~~~-~~~----~~~~~i~~~l~~lH~~---gi~H~Dikp~Nili~~~g-i~liDfg~~~~~ 184 (232)
T PRK10359 114 YAHTYIMLIEYIEGVELNDMPE-ISE----DVKAKIKASIESLHQH---GMVSGDPHKGNFIVSKNG-LRIIDLSGKRCT 184 (232)
T ss_pred ccCCeEEEEEEECCccHHHhhh-ccH----HHHHHHHHHHHHHHHc---CCccCCCChHHEEEeCCC-EEEEECCCcccc
Confidence 124689999999999977522 222 3456999999999986 999999999999999888 999999987644
No 442
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.58 E-value=5.5e-15 Score=146.76 Aligned_cols=130 Identities=20% Similarity=0.232 Sum_probs=100.4
Q ss_pred ccccccceEEEEEecCCCeEEEEEEeeccc--------hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEE
Q 041479 529 YESLVKATVYKGILDLDQTFIAVKVLFLHQ--------RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRAL 600 (771)
Q Consensus 529 l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--------~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~l 600 (771)
+|+|.+|+||+|.+. +..|++|+..... ....+++.+|++++..++|+++.....++...+ ..++
T Consensus 2 ig~G~~~~vy~~~~~--~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~-----~~~l 74 (199)
T TIGR03724 2 IAKGAEAIIYLGDFL--GLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPD-----NKTI 74 (199)
T ss_pred CCCCceEEEEEeecC--CccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC-----CCEE
Confidence 689999999999864 4579999864321 112367889999999999887554444444433 3589
Q ss_pred EEEeccCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCcccc
Q 041479 601 VYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673 (771)
Q Consensus 601 v~e~~~~g~L~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~ 673 (771)
||||++|++|.+....- .. .++.+++.++.++|+. +++|||++|.||+++ ++.++++|||+++..
T Consensus 75 v~e~~~g~~l~~~~~~~---~~-~~~~~i~~~l~~lH~~---gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~~ 139 (199)
T TIGR03724 75 VMEYIEGKPLKDVIEEG---ND-ELLREIGRLVGKLHKA---GIVHGDLTTSNIIVR-DDKLYLIDFGLGKYS 139 (199)
T ss_pred EEEEECCccHHHHHhhc---HH-HHHHHHHHHHHHHHHC---CeecCCCCcceEEEE-CCcEEEEECCCCcCC
Confidence 99999999986542111 11 7899999999999985 999999999999999 789999999998753
No 443
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.57 E-value=5e-15 Score=160.44 Aligned_cols=190 Identities=27% Similarity=0.348 Sum_probs=139.3
Q ss_pred HhccCCCCceeEEEEeecCCCCCceeEEEEEEeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEec
Q 041479 572 LRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHC 647 (771)
Q Consensus 572 l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHr 647 (771)
|+.+.|.|+.+++|.+.++. ..+.|.+||+.|+|.+. ...++|.....+..+++.|++|+|+- +.-.|+
T Consensus 1 l~~l~h~n~~~f~g~~~~~~-----~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s--~i~~hg 73 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGP-----EMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNS--PIGYHG 73 (484)
T ss_pred CcccchhhhhhheeeEecCC-----ceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcC--cceeee
Confidence 45789999999999999885 67999999999999877 34588889999999999999999984 334999
Q ss_pred CCCCCCeeeCCCCceEEecccCccccCcccCCcccccccccccccccchh----------------------HHHHHHHH
Q 041479 648 DLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE----------------------YGILLLEI 705 (771)
Q Consensus 648 dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE----------------------~Gv~l~el 705 (771)
.+++.|.++|....+|++|||+............. ....-..-|.||| ||++++|+
T Consensus 74 ~l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~--~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei 151 (484)
T KOG1023|consen 74 ALKSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAH--HPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEI 151 (484)
T ss_pred eeccccceeeeeEEEEechhhhccccccccccccc--chhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHH
Confidence 99999999999999999999998876431110000 0111234588888 79999999
Q ss_pred HhCCCCCCccccCCc--cHHHHHHh-hCC---Cchhh--hcCccccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 706 FTGKRPTSDMFTEGL--DLHNFVKM-ALP---DQILQ--VLDPLFLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 706 ~tg~~P~~~~~~~~~--~~~~~~~~-~~~---~~~~~--~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
++.+.||+....... .+...+.. ..+ +.+.. ...+.+...+..||..+|++||+++.|...++.+
T Consensus 152 ~~r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~ 224 (484)
T KOG1023|consen 152 LFRSGPFDLRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTI 224 (484)
T ss_pred HhccCccccccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHhhhhhh
Confidence 999999976433222 23333333 221 11111 1122233445599999999999999998877653
No 444
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.57 E-value=7.6e-15 Score=167.72 Aligned_cols=132 Identities=20% Similarity=0.223 Sum_probs=105.0
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeecc--c------hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCcee
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLH--Q------RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYF 597 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~--~------~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 597 (771)
...+|+|.+|+||+|.+.... +++|+.... . ....+++.+|++++++++|++|+....++.... .
T Consensus 338 ~~~iG~G~~g~Vy~~~~~~~~--~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~-----~ 410 (535)
T PRK09605 338 DHLIGKGAEADIKKGEYLGRD--AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPE-----E 410 (535)
T ss_pred cceeccCCcEEEEEEeecCcc--ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCC-----C
Confidence 345799999999999886554 444433211 1 122357899999999999999998877776644 4
Q ss_pred EEEEEEeccCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCcccc
Q 041479 598 RALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673 (771)
Q Consensus 598 ~~lv~e~~~~g~L~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~ 673 (771)
.++||||+++++|.++.. ....++.++++++.|||+. +|+|||+||+||++ +++.++|+|||+++..
T Consensus 411 ~~lv~E~~~g~~L~~~l~-----~~~~~~~~i~~~L~~lH~~---giiHrDlkp~NILl-~~~~~~liDFGla~~~ 477 (535)
T PRK09605 411 KTIVMEYIGGKDLKDVLE-----GNPELVRKVGEIVAKLHKA---GIVHGDLTTSNFIV-RDDRLYLIDFGLGKYS 477 (535)
T ss_pred CEEEEEecCCCcHHHHHH-----HHHHHHHHHHHHHHHHHhC---CCccCCCChHHEEE-ECCcEEEEeCcccccC
Confidence 589999999999976422 4678899999999999986 99999999999999 5779999999999864
No 445
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.57 E-value=4.8e-15 Score=150.51 Aligned_cols=188 Identities=24% Similarity=0.242 Sum_probs=123.9
Q ss_pred CCCCceeEEEEeecCCC----------------------CCceeEEEEEEeccCCCCCCC--cccCCHHHHHHHHHHHHH
Q 041479 576 RHRNLVKIITACSTSDF----------------------QGNYFRALVYEFMHHGSLESC--PRILSFLRRLNIAIDVAS 631 (771)
Q Consensus 576 ~H~nIv~l~~~~~~~~~----------------------~~~~~~~lv~e~~~~g~L~~~--~~~l~~~~~~~i~~~ia~ 631 (771)
+|||||++.++|.+.-. ......|+||.-.+. +|.++ .+..+...+.-+..|+++
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~~~s~r~~~~~laQlLE 352 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTRHRSYRTGRVILAQLLE 352 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcCCCchHHHHHHHHHHHH
Confidence 58888888877654311 112356888876643 66665 445666677788899999
Q ss_pred HHHHHHhcCCCCeEecCCCCCCeeeC--CCC--ceEEecccCccccCcccCC--cccccccccccccccchh--------
Q 041479 632 ALEYLHHHCKKPIVHCDLKPSNVLLD--NDM--TAHMGDFGLTRFIPEVMSS--NQCSSVGLKGTVGYATPE-------- 697 (771)
Q Consensus 632 gL~~LH~~~~~~ivHrdlk~~NILl~--~~~--~~kl~DfGla~~~~~~~~~--~~~~~~~~~gt~~y~aPE-------- 697 (771)
|+.|||.+ +|.|||+|++|||+. +++ .+.|+|||++-.-...+-. .........|.-.-||||
T Consensus 353 av~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PGp 429 (598)
T KOG4158|consen 353 AVTHLHKH---GVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPGP 429 (598)
T ss_pred HHHHHHHc---cchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCCC
Confidence 99999987 999999999999993 333 5789999997532221110 011122334677789999
Q ss_pred -------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCccccccCcccChhchhhcCCHHHHH
Q 041479 698 -------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFLVGGVQEGEETAEENIKKGQIR 764 (771)
Q Consensus 698 -------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl 764 (771)
-|.+.||+++...||..--..-.+...+....+| ..++.+.+..++.....++.||++||+..-..
T Consensus 430 ~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Yqe~qLP-alp~~vpp~~rqlV~~lL~r~pskRvsp~iAA 508 (598)
T KOG4158|consen 430 NAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTYQESQLP-ALPSRVPPVARQLVFDLLKRDPSKRVSPNIAA 508 (598)
T ss_pred ceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhhhhhhCC-CCcccCChHHHHHHHHHhcCCccccCCccHHH
Confidence 3999999999999995411111223333333443 23444455555555577899999999977665
Q ss_pred HHHH
Q 041479 765 ESLI 768 (771)
Q Consensus 765 ~~L~ 768 (771)
..|+
T Consensus 509 Nvl~ 512 (598)
T KOG4158|consen 509 NVLN 512 (598)
T ss_pred hHHH
Confidence 5543
No 446
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.56 E-value=2.1e-14 Score=135.42 Aligned_cols=132 Identities=18% Similarity=0.197 Sum_probs=111.2
Q ss_pred cccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCC--CCceeEEEEeecCCCCCceeEEEEEEec
Q 041479 528 SYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRH--RNLVKIITACSTSDFQGNYFRALVYEFM 605 (771)
Q Consensus 528 ~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H--~nIv~l~~~~~~~~~~~~~~~~lv~e~~ 605 (771)
.+++|..+.||++.... ..++||....... ..++.+|+.+++.++| +.+.+++++....+ ..+++|||+
T Consensus 5 ~i~~g~~~~v~~~~~~~--~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~-----~~~~v~e~~ 75 (155)
T cd05120 5 LLKGGLTNRVYLLGTKD--EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDG-----WSYLLMEWI 75 (155)
T ss_pred ecccccccceEEEEecC--CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCC-----ccEEEEEec
Confidence 46889999999999865 4899999855433 5678999999999986 58999988876554 579999999
Q ss_pred cCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccc
Q 041479 606 HHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRF 672 (771)
Q Consensus 606 ~~g~L~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~ 672 (771)
+++.+... +......++.+++++++++|.....+++|+|++|+||+++..+.++++|||.++.
T Consensus 76 ~g~~~~~~----~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 76 EGETLDEV----SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred CCeecccC----CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 99888654 6667788899999999999986555799999999999999989999999998874
No 447
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.56 E-value=1.4e-15 Score=172.01 Aligned_cols=228 Identities=17% Similarity=0.191 Sum_probs=157.6
Q ss_pred cccccccccccccceEEEEEecCCCeEEEEEEeeccc-hhhHHHH---HHHHHHHhccCCCCceeEEEEeecCCCCCcee
Q 041479 522 DLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ-RGALKSF---MAECQALRNIRHRNLVKIITACSTSDFQGNYF 597 (771)
Q Consensus 522 ~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~-~~~~~~~---~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 597 (771)
+......+|++-|-.|.+|++++| .|+||++.... .-..+.| ++|++ ..-.+|||++++...-.+.. .
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG--~vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~k-----A 95 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREG--LVVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDK-----A 95 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCc--eEEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhH-----H
Confidence 345566789999999999998866 59999996654 2233333 44455 55568999999876643332 4
Q ss_pred EEEEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccc--
Q 041479 598 RALVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRF-- 672 (771)
Q Consensus 598 ~~lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~-- 672 (771)
.|||=+|..+ +|.+. ..-+...+..-|+.|+..|+.-+|.. +|+|+|||.+|||+.+-..+.++||..-+.
T Consensus 96 AylvRqyvkh-nLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~---gVcHGDIKsENILiTSWNW~~LtDFAsFKPtY 171 (1431)
T KOG1240|consen 96 AYLVRQYVKH-NLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKL---GVCHGDIKSENILITSWNWLYLTDFASFKPTY 171 (1431)
T ss_pred HHHHHHHHhh-hhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHc---CccccccccceEEEeeechhhhhcccccCCcc
Confidence 5788888865 77665 22345566778899999999999986 999999999999999999999999987653
Q ss_pred cCcccCCc--ccccccccccccccchh--------------------------HHHHHHHHHh-CCCCCCccccCCccHH
Q 041479 673 IPEVMSSN--QCSSVGLKGTVGYATPE--------------------------YGILLLEIFT-GKRPTSDMFTEGLDLH 723 (771)
Q Consensus 673 ~~~~~~~~--~~~~~~~~gt~~y~aPE--------------------------~Gv~l~el~t-g~~P~~~~~~~~~~~~ 723 (771)
++...... ....+... -.-|.||| .||+++|+++ |++||.-. .+.
T Consensus 172 LPeDNPadf~fFFDTSrR-RtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LS-----QL~ 245 (1431)
T KOG1240|consen 172 LPEDNPADFTFFFDTSRR-RTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLS-----QLL 245 (1431)
T ss_pred CCCCCcccceEEEecCCc-eeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHH-----HHH
Confidence 22221111 11111111 22499999 4999999999 78888521 122
Q ss_pred HHHHhh-C-C-CchhhhcCccccccCcccChhchhhcCCHHHHHHHH
Q 041479 724 NFVKMA-L-P-DQILQVLDPLFLVGGVQEGEETAEENIKKGQIRESL 767 (771)
Q Consensus 724 ~~~~~~-~-~-~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L 767 (771)
.+..+. . + ....++-|..++.....|++.||++|.++++.++.=
T Consensus 246 aYr~~~~~~~e~~Le~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~y 292 (1431)
T KOG1240|consen 246 AYRSGNADDPEQLLEKIEDVSLRNLILSMIQRDPSKRLSAEDYLQKY 292 (1431)
T ss_pred hHhccCccCHHHHHHhCcCccHHHHHHHHHccCchhccCHHHHHHhh
Confidence 222221 1 1 224455566676666799999999999999999863
No 448
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.55 E-value=1.5e-16 Score=168.22 Aligned_cols=215 Identities=31% Similarity=0.470 Sum_probs=155.6
Q ss_pred EecccCcCcccCChhhh-hCCCCCcEEEeecCcccccCCccccCCCCCCEEEccccccCCCCCcCcccccCCCCCcEEEc
Q 041479 176 FHVSENQLVGELPPHIG-FTLPNVRILLLAGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEVVSL 254 (771)
Q Consensus 176 L~Ls~N~l~g~lp~~~~-~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~L 254 (771)
|.|++-++. .+|-..+ ..+..-...||+.|++. .+|..+..+..|+.+.|.+|.+. .+|+.+ .++..|.+|||
T Consensus 55 l~Ls~rrlk-~fpr~a~~~~ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i---~~L~~lt~l~l 128 (722)
T KOG0532|consen 55 LLLSGRRLK-EFPRGAASYDLTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAI---CNLEALTFLDL 128 (722)
T ss_pred cccccchhh-cCCCccccccccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhh---hhhhHHHHhhh
Confidence 344444444 4443222 23445566677777776 56777777777777777777776 345555 56677777777
Q ss_pred cCccccccCChhhhhcccccceeecccCcCcccCcccccccCCcceEecCCccceeccCccccCCCCCCEEEccCCcccc
Q 041479 255 SVNSLSGTLPNSLANFSSHLRYLYMSANPISGSIPTEIGNLKNLIIIAIEKFILIRNIPISVGYLLKLQVLSLFENNISR 334 (771)
Q Consensus 255 s~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 334 (771)
+.|+++ .+|..+..++ |+.|.+++|+++ .+|..+ +.+..|..||.+.|++.
T Consensus 129 s~NqlS-~lp~~lC~lp--Lkvli~sNNkl~-~lp~~i------------------------g~~~tl~~ld~s~nei~- 179 (722)
T KOG0532|consen 129 SSNQLS-HLPDGLCDLP--LKVLIVSNNKLT-SLPEEI------------------------GLLPTLAHLDVSKNEIQ- 179 (722)
T ss_pred ccchhh-cCChhhhcCc--ceeEEEecCccc-cCCccc------------------------ccchhHHHhhhhhhhhh-
Confidence 777777 7777777764 788888888877 455444 44456667777777776
Q ss_pred cCCcccccccccccccccCccceecCCcccccccceeeecccCcccCCCCcCCCCCCCCCeEECCCCcccccCCcchhhh
Q 041479 335 EIPSSLGNFTFLTELNLCGNSIRGSVPSALGSCHQLWLDLSHNHLTGPIPLAVGNPKSIPHLDLSKNELSGEIPSSLAWI 414 (771)
Q Consensus 335 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~ 414 (771)
.+|..++++.+|+.|++..|++. .+|..+..++...||+|+|+++ .+|..|..|+.|++|-|.+|.|+ ..|..++ .
T Consensus 180 slpsql~~l~slr~l~vrRn~l~-~lp~El~~LpLi~lDfScNkis-~iPv~fr~m~~Lq~l~LenNPLq-SPPAqIC-~ 255 (722)
T KOG0532|consen 180 SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSLPLIRLDFSCNKIS-YLPVDFRKMRHLQVLQLENNPLQ-SPPAQIC-E 255 (722)
T ss_pred hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCCceeeeecccCcee-ecchhhhhhhhheeeeeccCCCC-CChHHHH-h
Confidence 67888999999999999999998 5667777777779999999998 78999999999999999999998 7777665 2
Q ss_pred hcccccccEEECcCC
Q 041479 415 FGYISIFAKLNLSYN 429 (771)
Q Consensus 415 ~~~l~~L~~L~Ls~N 429 (771)
-+...-.++|+..-.
T Consensus 256 kGkVHIFKyL~~qA~ 270 (722)
T KOG0532|consen 256 KGKVHIFKYLSTQAC 270 (722)
T ss_pred ccceeeeeeecchhc
Confidence 344555667776655
No 449
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.53 E-value=2.7e-14 Score=148.87 Aligned_cols=130 Identities=25% Similarity=0.355 Sum_probs=108.3
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccC-----C---CCceeEEEEeecCCCCC
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIR-----H---RNLVKIITACSTSDFQG 594 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-----H---~nIv~l~~~~~~~~~~~ 594 (771)
+...-.||=|-|+|||.|.+..+.+.||+|+.+.. ....+..+.||+++++++ | ..||+|+++|...+..+
T Consensus 80 Y~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA-qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpNG 158 (590)
T KOG1290|consen 80 YHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA-QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGPNG 158 (590)
T ss_pred EEEEEeccccccceeEEEeeccCCeEEEEEEEehh-hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCCCC
Confidence 34455688899999999999999999999998643 345688899999999984 2 47999999998776554
Q ss_pred ceeEEEEEEeccCCCCCCC-----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeC
Q 041479 595 NYFRALVYEFMHHGSLESC-----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD 657 (771)
Q Consensus 595 ~~~~~lv~e~~~~g~L~~~-----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~ 657 (771)
. +.|||+||+ |-+|-.+ .+.++...+.+|+.||+.||.|||..| +|||-||||+|||+.
T Consensus 159 ~-HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 159 Q-HVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLLC 222 (590)
T ss_pred c-EEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeeee
Confidence 3 689999999 4455333 456888899999999999999999986 999999999999994
No 450
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.52 E-value=1.5e-15 Score=164.21 Aligned_cols=170 Identities=26% Similarity=0.238 Sum_probs=135.2
Q ss_pred ccccccceEEE---EEecCCCeEEEEEEeeccch--hhHHHHHHHHHHHhccC-CCCceeEEEEeecCCCCCceeEEEEE
Q 041479 529 YESLVKATVYK---GILDLDQTFIAVKVLFLHQR--GALKSFMAECQALRNIR-HRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 529 l~~~~~~~Vy~---~~~~~~~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
+|+|.+|.|+. +.-.+.++.||+|+.+.... +.......|-.++..++ ||.+|++..++.+.. ..++++
T Consensus 2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~-----kl~l~l 76 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDG-----KLYLIL 76 (612)
T ss_pred CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeecccc-----chhHhh
Confidence 57788887653 33344567899998864421 11225667888899997 999999998877666 679999
Q ss_pred EeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCC
Q 041479 603 EFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSS 679 (771)
Q Consensus 603 e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 679 (771)
+|..+|++... ...+.+.....+..+++-|++++|+. +|+|||+|++||+++.+|.+|+.|||+++..-+...
T Consensus 77 d~~rgg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l---~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~- 152 (612)
T KOG0603|consen 77 DFLRGGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKL---GIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKI- 152 (612)
T ss_pred hhcccchhhhccccCCchHHHHHHHHHHHHHHHHhhcchh---HHHHhcccccceeecccCccccCCchhhhHhHhhhh-
Confidence 99999999766 23455666677778899999999985 999999999999999999999999999986543221
Q ss_pred cccccccccccccccchh-------------HHHHHHHHHhCCCCCCc
Q 041479 680 NQCSSVGLKGTVGYATPE-------------YGILLLEIFTGKRPTSD 714 (771)
Q Consensus 680 ~~~~~~~~~gt~~y~aPE-------------~Gv~l~el~tg~~P~~~ 714 (771)
.|||.-||||| ||++.+||+||-.||..
T Consensus 153 -------~cgt~eymApEI~~gh~~a~D~ws~gvl~felltg~~pf~~ 193 (612)
T KOG0603|consen 153 -------ACGTYEYRAPEIINGHLSAADWWSFGVLAFELLTGTLPFGG 193 (612)
T ss_pred -------cccchhhhhhHhhhccCCcccchhhhhhHHHHhhCCCCCch
Confidence 17999999999 79999999999999865
No 451
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.50 E-value=7.3e-14 Score=137.19 Aligned_cols=134 Identities=20% Similarity=0.171 Sum_probs=95.4
Q ss_pred cccccccceEEEEEecCCCeEEEEEEeeccchh--hHHH----------------------HHHHHHHHhccCCCC--ce
Q 041479 528 SYESLVKATVYKGILDLDQTFIAVKVLFLHQRG--ALKS----------------------FMAECQALRNIRHRN--LV 581 (771)
Q Consensus 528 ~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~--~~~~----------------------~~~E~~~l~~l~H~n--Iv 581 (771)
.+|+|.+|+||+|+.. +++.||||++...... .... ...|.+.+.++++.. +.
T Consensus 4 ~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~ 82 (187)
T cd05119 4 PIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPVP 82 (187)
T ss_pred ccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCCC
Confidence 4799999999999987 5669999998653211 1111 135666666665432 44
Q ss_pred eEEEEeecCCCCCceeEEEEEEeccCCCCCCC-cccCCH-HHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCC
Q 041479 582 KIITACSTSDFQGNYFRALVYEFMHHGSLESC-PRILSF-LRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDND 659 (771)
Q Consensus 582 ~l~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~-~~~l~~-~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~ 659 (771)
+.+++. ..++||||++++.+... ...... .+...++.+++.++.++|+. .+|+|||+||+||+++ +
T Consensus 83 ~~~~~~---------~~~lv~e~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~lh~~--~~ivH~Dl~p~Nili~-~ 150 (187)
T cd05119 83 KPIDLN---------RHVLVMEFIGGDGIPAPRLKDVRLLEDPEELYDQILELMRKLYRE--AGLVHGDLSEYNILVD-D 150 (187)
T ss_pred ceEecC---------CCEEEEEEeCCCCccChhhhhhhhcccHHHHHHHHHHHHHHHhhc--cCcCcCCCChhhEEEE-C
Confidence 444431 24899999999654321 111111 56788999999999999982 3899999999999999 8
Q ss_pred CceEEecccCccccC
Q 041479 660 MTAHMGDFGLTRFIP 674 (771)
Q Consensus 660 ~~~kl~DfGla~~~~ 674 (771)
+.++++|||.+....
T Consensus 151 ~~~~liDfg~a~~~~ 165 (187)
T cd05119 151 GKVYIIDVPQAVEID 165 (187)
T ss_pred CcEEEEECccccccc
Confidence 899999999997543
No 452
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.47 E-value=2.7e-13 Score=137.75 Aligned_cols=136 Identities=17% Similarity=0.080 Sum_probs=101.2
Q ss_pred cccc-ccccceEEEEEecCCCeEEEEEEeeccc-------------hhhHHHHHHHHHHHhccCCCCc--eeEEEEeecC
Q 041479 527 VSYE-SLVKATVYKGILDLDQTFIAVKVLFLHQ-------------RGALKSFMAECQALRNIRHRNL--VKIITACSTS 590 (771)
Q Consensus 527 ~~l~-~~~~~~Vy~~~~~~~~~~vAvK~~~~~~-------------~~~~~~~~~E~~~l~~l~H~nI--v~l~~~~~~~ 590 (771)
..+| .|+.|+||+.... +..+|||.+.... .....++.+|++++.+++|++| ++.+++....
T Consensus 37 ~~lg~~~g~gtv~~v~~~--~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTP--GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred ceeecCCCCccEEEEEeC--CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 3465 7889999998775 4489999885421 1223578899999999998775 6777765433
Q ss_pred CCCCceeEEEEEEeccC-CCCCCCcc--cCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecc
Q 041479 591 DFQGNYFRALVYEFMHH-GSLESCPR--ILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDF 667 (771)
Q Consensus 591 ~~~~~~~~~lv~e~~~~-g~L~~~~~--~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~Df 667 (771)
.. ..+..++||||+++ .+|.++.. .++. ..+.+++.++.+||+. ||+|||+||+|||++.++.++++||
T Consensus 115 ~~-~~~~~~lV~e~l~G~~~L~~~l~~~~l~~----~~~~~i~~~l~~lH~~---GI~HrDlkp~NILv~~~~~v~LIDf 186 (239)
T PRK01723 115 HG-LFYRADILIERIEGARDLVALLQEAPLSE----EQWQAIGQLIARFHDA---GVYHADLNAHNILLDPDGKFWLIDF 186 (239)
T ss_pred cC-cceeeeEEEEecCCCCCHHHHHhcCCCCH----HHHHHHHHHHHHHHHC---CCCCCCCCchhEEEcCCCCEEEEEC
Confidence 21 11234699999997 57765522 2332 2367899999999986 9999999999999998889999999
Q ss_pred cCccc
Q 041479 668 GLTRF 672 (771)
Q Consensus 668 Gla~~ 672 (771)
|.++.
T Consensus 187 g~~~~ 191 (239)
T PRK01723 187 DRGEL 191 (239)
T ss_pred CCccc
Confidence 98874
No 453
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.44 E-value=4.3e-13 Score=136.91 Aligned_cols=182 Identities=24% Similarity=0.279 Sum_probs=117.2
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCC----------CCceeEEEEeec
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRH----------RNLVKIITACST 589 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H----------~nIv~l~~~~~~ 589 (771)
......+|.|.++.||.+++.++++.+|||+..... ....+++.+|.-....+.+ -.++--++...-
T Consensus 14 l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i 93 (288)
T PF14531_consen 14 LVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRI 93 (288)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEE
T ss_pred EEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEE
Confidence 445566899999999999999999999999996543 3346777777755555432 122222222211
Q ss_pred CC---------CCCce---eEEEEEEeccCCCCCCCc----------ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEec
Q 041479 590 SD---------FQGNY---FRALVYEFMHHGSLESCP----------RILSFLRRLNIAIDVASALEYLHHHCKKPIVHC 647 (771)
Q Consensus 590 ~~---------~~~~~---~~~lv~e~~~~g~L~~~~----------~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHr 647 (771)
.. ....+ -.+++|+-+ .+||.++. ..+....+..+..|+.+.++++|+. ||+|+
T Consensus 94 ~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~---GlVHg 169 (288)
T PF14531_consen 94 PGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY---GLVHG 169 (288)
T ss_dssp TTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEEES
T ss_pred cCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc---ceEec
Confidence 10 01111 236778877 45776551 1233455677779999999999996 99999
Q ss_pred CCCCCCeeeCCCCceEEecccCccccCcccCCcccccccccccccccchh-----------------------HHHHHHH
Q 041479 648 DLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE-----------------------YGILLLE 704 (771)
Q Consensus 648 dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE-----------------------~Gv~l~e 704 (771)
||||+|++++.+|.++++||+.....+.... + ...+..|.+|| +|+++|.
T Consensus 170 di~~~nfll~~~G~v~Lg~F~~~~r~g~~~~---~----~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~ 242 (288)
T PF14531_consen 170 DIKPENFLLDQDGGVFLGDFSSLVRAGTRYR---C----SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYS 242 (288)
T ss_dssp T-SGGGEEE-TTS-EEE--GGGEEETTEEEE---G----GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHH
T ss_pred ccceeeEEEcCCCCEEEcChHHHeecCceee---c----cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHH
Confidence 9999999999999999999997765443221 1 12356788887 6999999
Q ss_pred HHhCCCCCCcc
Q 041479 705 IFTGKRPTSDM 715 (771)
Q Consensus 705 l~tg~~P~~~~ 715 (771)
+..|+.||...
T Consensus 243 lWC~~lPf~~~ 253 (288)
T PF14531_consen 243 LWCGRLPFGLS 253 (288)
T ss_dssp HHHSS-STCCC
T ss_pred HHHccCCCCCC
Confidence 99999999754
No 454
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.44 E-value=9.5e-14 Score=153.33 Aligned_cols=200 Identities=33% Similarity=0.469 Sum_probs=121.9
Q ss_pred EEEcCCCcccccCCccccCCCCCCEEecccCcCcccCCcccccCCcccccCCccccCCC-CCCEEecccccCcCCCCccc
Q 041479 72 LINLQQNNFSSNIPHEIGRLFRLRHIIFNSNALQGQIPDSRLILNKLEGNIPSELGSLL-KFKGLGLANNYFTGPIPHLN 150 (771)
Q Consensus 72 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~l~~n~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~lp~L~ 150 (771)
.++++.|.+.. .+..+..++.++.|++.+|.++ .+|.....+. +|+.|++++|++.
T Consensus 97 ~l~~~~~~~~~-~~~~~~~~~~l~~L~l~~n~i~---------------~i~~~~~~~~~nL~~L~l~~N~i~------- 153 (394)
T COG4886 97 SLDLNLNRLRS-NISELLELTNLTSLDLDNNNIT---------------DIPPLIGLLKSNLKELDLSDNKIE------- 153 (394)
T ss_pred eeecccccccc-CchhhhcccceeEEecCCcccc---------------cCccccccchhhcccccccccchh-------
Confidence 56777776642 3444555667777777777765 4555555553 6777777777666
Q ss_pred eeeecccccccccCccccCCCCCCEEecccCcCcccCChhhhhCCCCCcEEEeecCcccccCCccccCCCCCCEEEcccc
Q 041479 151 MFQVSVYSLTGSIPIQLLNITSMEYFHVSENQLVGELPPHIGFTLPNVRILLLAGNQFFGNIPHSISNASKLEWLDFANN 230 (771)
Q Consensus 151 ~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 230 (771)
.+|..+..+++|+.|++++|+++ .+|.... .+++|+.|++++|+++ .+|........|++|++++|
T Consensus 154 -----------~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~-~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N 219 (394)
T COG4886 154 -----------SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLS-NLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNN 219 (394)
T ss_pred -----------hhhhhhhccccccccccCCchhh-hhhhhhh-hhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCC
Confidence 34445666667777777777776 6666543 5566777777777776 45554445555777777777
Q ss_pred ccCCCCCcCcccccCCCCCcEEEccCccccccCChhhhhcccccceeecccCcCcccCcccccccCCcceEecCCcccee
Q 041479 231 SLTGLIPEDLDSLVNCTYLEVVSLSVNSLSGTLPNSLANFSSHLRYLYMSANPISGSIPTEIGNLKNLIIIAIEKFILIR 310 (771)
Q Consensus 231 ~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~ 310 (771)
++... +.. +.++.++..+.+.+|++. .++..+..+. ++++|++++|.++. ++. ++.+.+++.|++++|.+..
T Consensus 220 ~~~~~-~~~---~~~~~~l~~l~l~~n~~~-~~~~~~~~l~-~l~~L~~s~n~i~~-i~~-~~~~~~l~~L~~s~n~~~~ 291 (394)
T COG4886 220 SIIEL-LSS---LSNLKNLSGLELSNNKLE-DLPESIGNLS-NLETLDLSNNQISS-ISS-LGSLTNLRELDLSGNSLSN 291 (394)
T ss_pred cceec-chh---hhhcccccccccCCceee-eccchhcccc-ccceeccccccccc-ccc-ccccCccCEEeccCccccc
Confidence 43222 222 255566666666777665 4455555554 47777777777763 333 6667777777777776665
Q ss_pred ccCccc
Q 041479 311 NIPISV 316 (771)
Q Consensus 311 ~~p~~~ 316 (771)
.+|...
T Consensus 292 ~~~~~~ 297 (394)
T COG4886 292 ALPLIA 297 (394)
T ss_pred cchhhh
Confidence 554433
No 455
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.44 E-value=1.4e-14 Score=153.56 Aligned_cols=199 Identities=28% Similarity=0.402 Sum_probs=156.1
Q ss_pred EEEccccccCCCCCcCcccccCCCCCcEEEccCccccccCChhhhhcccccceeecccCcCcccCcccccccCCcceEec
Q 041479 224 WLDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSLSGTLPNSLANFSSHLRYLYMSANPISGSIPTEIGNLKNLIIIAI 303 (771)
Q Consensus 224 ~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 303 (771)
.|.|++-+++..+-.++ . ..++--...||+.|++. .+|..+..+. .|+.|.|..|.|. .+|..++++..|+++++
T Consensus 54 ~l~Ls~rrlk~fpr~a~-~-~~ltdt~~aDlsrNR~~-elp~~~~~f~-~Le~liLy~n~~r-~ip~~i~~L~~lt~l~l 128 (722)
T KOG0532|consen 54 RLLLSGRRLKEFPRGAA-S-YDLTDTVFADLSRNRFS-ELPEEACAFV-SLESLILYHNCIR-TIPEAICNLEALTFLDL 128 (722)
T ss_pred ccccccchhhcCCCccc-c-ccccchhhhhccccccc-cCchHHHHHH-HHHHHHHHhccce-ecchhhhhhhHHHHhhh
Confidence 34455555553322222 1 44555566788888887 7787777665 5888888888888 78888888888888888
Q ss_pred CCccceeccCccccCCCCCCEEEccCCcccccCCcccccccccccccccCccceecCCcccccccce-eeecccCcccCC
Q 041479 304 EKFILIRNIPISVGYLLKLQVLSLFENNISREIPSSLGNFTFLTELNLCGNSIRGSVPSALGSCHQL-WLDLSHNHLTGP 382 (771)
Q Consensus 304 ~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l-~L~Ls~N~l~~~ 382 (771)
+.|.+ ..+|..+..++ |+.|-+++|+++ .+|+.++.+..|..||.+.|.|. .+|..++.+..+ .|++..|++..
T Consensus 129 s~Nql-S~lp~~lC~lp-Lkvli~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~~- 203 (722)
T KOG0532|consen 129 SSNQL-SHLPDGLCDLP-LKVLIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLED- 203 (722)
T ss_pred ccchh-hcCChhhhcCc-ceeEEEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhhh-
Confidence 88887 34566666554 899999999998 78999999999999999999999 688888888888 89999999995
Q ss_pred CCcCCCCCCCCCeEECCCCcccccCCcchhhhhcccccccEEECcCCCCCCCCCccc
Q 041479 383 IPLAVGNPKSIPHLDLSKNELSGEIPSSLAWIFGYISIFAKLNLSYNNLDGDVPRKM 439 (771)
Q Consensus 383 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 439 (771)
+|.....+ .|..||+|+|+++ .+|-.|. .|+.|++|-|.+|+|+ .+|..+
T Consensus 204 lp~El~~L-pLi~lDfScNkis-~iPv~fr----~m~~Lq~l~LenNPLq-SPPAqI 253 (722)
T KOG0532|consen 204 LPEELCSL-PLIRLDFSCNKIS-YLPVDFR----KMRHLQVLQLENNPLQ-SPPAQI 253 (722)
T ss_pred CCHHHhCC-ceeeeecccCcee-ecchhhh----hhhhheeeeeccCCCC-CChHHH
Confidence 45555544 5899999999999 8898776 9999999999999998 556544
No 456
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.43 E-value=1.8e-13 Score=151.16 Aligned_cols=186 Identities=35% Similarity=0.501 Sum_probs=137.4
Q ss_pred ccCCCCCCEEecccCcCcccCChhhhhCCC-CCcEEEeecCcccccCCccccCCCCCCEEEccccccCCCCCcCcccccC
Q 041479 167 LLNITSMEYFHVSENQLVGELPPHIGFTLP-NVRILLLAGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVN 245 (771)
Q Consensus 167 ~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 245 (771)
+..++.++.|++.+|.++ .+|+... .+. +|+.|++++|++. .+|..+..+++|+.|++++|+++.+.+. . ..
T Consensus 112 ~~~~~~l~~L~l~~n~i~-~i~~~~~-~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~-~---~~ 184 (394)
T COG4886 112 LLELTNLTSLDLDNNNIT-DIPPLIG-LLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLSDLPKL-L---SN 184 (394)
T ss_pred hhcccceeEEecCCcccc-cCccccc-cchhhcccccccccchh-hhhhhhhccccccccccCCchhhhhhhh-h---hh
Confidence 444567778888888887 7777665 553 7888888888887 4556677888888888888888765432 1 26
Q ss_pred CCCCcEEEccCccccccCChhhhhcccccceeecccCcCcccCcccccccCCcceEecCCccceeccCccccCCCCCCEE
Q 041479 246 CTYLEVVSLSVNSLSGTLPNSLANFSSHLRYLYMSANPISGSIPTEIGNLKNLIIIAIEKFILIRNIPISVGYLLKLQVL 325 (771)
Q Consensus 246 l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L 325 (771)
++.|+.|++++|+++ .+|...... .+|++|++++|++. ..+..+..+.++..+.+.+|.+.. ++..++.+++++.|
T Consensus 185 ~~~L~~L~ls~N~i~-~l~~~~~~~-~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~~-~~~~~~~l~~l~~L 260 (394)
T COG4886 185 LSNLNNLDLSGNKIS-DLPPEIELL-SALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLED-LPESIGNLSNLETL 260 (394)
T ss_pred hhhhhheeccCCccc-cCchhhhhh-hhhhhhhhcCCcce-ecchhhhhcccccccccCCceeee-ccchhcccccccee
Confidence 678888888888888 777754333 35888888888654 466777888888888877777643 36677788888999
Q ss_pred EccCCcccccCCcccccccccccccccCccceecCCcccc
Q 041479 326 SLFENNISREIPSSLGNFTFLTELNLCGNSIRGSVPSALG 365 (771)
Q Consensus 326 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 365 (771)
++++|.++. ++. +..+.+|+.|++++|.+...+|....
T Consensus 261 ~~s~n~i~~-i~~-~~~~~~l~~L~~s~n~~~~~~~~~~~ 298 (394)
T COG4886 261 DLSNNQISS-ISS-LGSLTNLRELDLSGNSLSNALPLIAL 298 (394)
T ss_pred ccccccccc-ccc-ccccCccCEEeccCccccccchhhhc
Confidence 999999874 443 88888899999999988866665443
No 457
>PLN03150 hypothetical protein; Provisional
Probab=99.41 E-value=4.6e-13 Score=154.70 Aligned_cols=116 Identities=33% Similarity=0.520 Sum_probs=86.9
Q ss_pred cccccccCccceecCCcccccccce-eeecccCcccCCCCcCCCCCCCCCeEECCCCcccccCCcchhhhhcccccccEE
Q 041479 346 LTELNLCGNSIRGSVPSALGSCHQL-WLDLSHNHLTGPIPLAVGNPKSIPHLDLSKNELSGEIPSSLAWIFGYISIFAKL 424 (771)
Q Consensus 346 L~~L~Ls~N~l~~~~p~~~~~l~~l-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~l~~L~~L 424 (771)
++.|+|++|.+++.+|..++.++.| .|+|++|++++.+|..++.+++|+.|+|++|+++|.+|+.+. .+++|+.|
T Consensus 420 v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~----~L~~L~~L 495 (623)
T PLN03150 420 IDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLG----QLTSLRIL 495 (623)
T ss_pred EEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHh----cCCCCCEE
Confidence 6677777777777777777777777 778888888777887788888888888888888888887655 77788888
Q ss_pred ECcCCCCCCCCCccccc--cccccccccCCCcccCCCCCCCCCCCC
Q 041479 425 NLSYNNLDGDVPRKMIF--KNASAISEAGNEKLCGGISELKLPPCT 468 (771)
Q Consensus 425 ~Ls~N~l~~~~p~~~~~--~~~~~~~~~~n~~lc~~~~~~~~~~~~ 468 (771)
+|++|+++|.+|..+.. .+...+.+.+|+.+|+.+. .++|.
T Consensus 496 ~Ls~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p~---l~~C~ 538 (623)
T PLN03150 496 NLNGNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIPG---LRACG 538 (623)
T ss_pred ECcCCcccccCChHHhhccccCceEEecCCccccCCCC---CCCCc
Confidence 88888888888865431 2344567889999998532 45674
No 458
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.32 E-value=4.8e-12 Score=139.79 Aligned_cols=141 Identities=20% Similarity=0.160 Sum_probs=98.3
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeeccchhh----------------------------------------HHHH
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGA----------------------------------------LKSF 565 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~----------------------------------------~~~~ 565 (771)
..++|+++.|.||+|+++++ +.||||+.+.+.... .-+|
T Consensus 122 ~~plasaSigQVh~A~l~~G-~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf 200 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLVDG-KEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDL 200 (437)
T ss_pred CcceeeeehhheEEEEecCC-CEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCH
Confidence 35789999999999999865 599999986542100 0146
Q ss_pred HHHHHHHhccC----CCCceeEEEEeecCCCCCceeEEEEEEeccCCCCCCCcc--cCCHHHHHHHHHHHHH-HHHHHHh
Q 041479 566 MAECQALRNIR----HRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESCPR--ILSFLRRLNIAIDVAS-ALEYLHH 638 (771)
Q Consensus 566 ~~E~~~l~~l~----H~nIv~l~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~~~--~l~~~~~~~i~~~ia~-gL~~LH~ 638 (771)
.+|++.+.+++ |.+-|.+-.++.+... ..++||||++|+++.+... .... .+..++..++. .+..+|.
T Consensus 201 ~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~----~~vLvmE~i~G~~L~~~~~~~~~~~-~~~~ia~~~~~~~l~ql~~ 275 (437)
T TIGR01982 201 RREAANASELGENFKNDPGVYVPEVYWDRTS----ERVLTMEWIDGIPLSDIAALDEAGL-DRKALAENLARSFLNQVLR 275 (437)
T ss_pred HHHHHHHHHHHHhcCCCCCEEeCCEehhhcC----CceEEEEeECCcccccHHHHHhcCC-CHHHHHHHHHHHHHHHHHh
Confidence 66777777763 3333444333332111 3589999999999977521 1111 24456666665 4677787
Q ss_pred cCCCCeEecCCCCCCeeeCCCCceEEecccCccccCc
Q 041479 639 HCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPE 675 (771)
Q Consensus 639 ~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~ 675 (771)
. |++|+|+||.||+++.+++++++|||++..+++
T Consensus 276 ~---g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~ 309 (437)
T TIGR01982 276 D---GFFHADLHPGNIFVLKDGKIIALDFGIVGRLSE 309 (437)
T ss_pred C---CceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence 4 999999999999999999999999999987654
No 459
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.31 E-value=2.4e-12 Score=149.24 Aligned_cols=161 Identities=19% Similarity=0.180 Sum_probs=111.9
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccC---CCCceeEEEEeecCCCCCceeEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIR---HRNLVKIITACSTSDFQGNYFRA 599 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~---H~nIv~l~~~~~~~~~~~~~~~~ 599 (771)
+.....+|+|++|+||+|...+ ++.||+|+=+.... =+|.--.+++.+++ -+-|..+..++...+ .-+
T Consensus 700 ~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~---WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~-----~S~ 770 (974)
T KOG1166|consen 700 FCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNP---WEFYICLQVMERLKPQMLPSIMHISSAHVFQN-----ASV 770 (974)
T ss_pred EEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCc---eeeeehHHHHHhhchhhhcchHHHHHHHccCC-----cce
Confidence 3345678999999999999988 67999998754431 01111223344444 122333333333222 347
Q ss_pred EEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeC-------CCCceEEecccC
Q 041479 600 LVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD-------NDMTAHMGDFGL 669 (771)
Q Consensus 600 lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~-------~~~~~kl~DfGl 669 (771)
+|+||.+.|+|.++ .+.++|.-+..++.|++.-+++||.+ +|||+||||+|.||. ....++|+|||.
T Consensus 771 lv~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~ 847 (974)
T KOG1166|consen 771 LVSEYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRREICADSDSKGLYLIDFGR 847 (974)
T ss_pred eeeeccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeecccCCCCcccceEEEeccc
Confidence 99999999999877 56788999999999999999999986 999999999999993 234699999999
Q ss_pred ccccCcccCCcccccccccccccccchh
Q 041479 670 TRFIPEVMSSNQCSSVGLKGTVGYATPE 697 (771)
Q Consensus 670 a~~~~~~~~~~~~~~~~~~gt~~y~aPE 697 (771)
+-.+..-.. ...-.+.++|-.+-.+|
T Consensus 848 siDm~lfp~--~~~F~~~~~td~f~C~E 873 (974)
T KOG1166|consen 848 SIDMKLFPD--GTKFKAVWHTDLFDCIE 873 (974)
T ss_pred ceeeeEcCC--CcEEeeeeccccchhHH
Confidence 875532211 12223455677776664
No 460
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.27 E-value=5.4e-13 Score=151.81 Aligned_cols=230 Identities=20% Similarity=0.156 Sum_probs=166.2
Q ss_pred cccccccccceEEEEEec-CCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccC-CCCceeEEEEeecCCCCCceeEEEE
Q 041479 526 NVSYESLVKATVYKGILD-LDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIR-HRNLVKIITACSTSDFQGNYFRALV 601 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~-~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~~~~~~lv 601 (771)
..++|+|.++.|-..... +....+|+|.+.... ....+....|..+-..+. |+|++++++.....+ ..+++
T Consensus 25 ~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~-----~~~~~ 99 (601)
T KOG0590|consen 25 SRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPR-----SYLLS 99 (601)
T ss_pred cccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCc-----ccccc
Confidence 345788888887766553 334567777775443 334455566888888887 999999999987776 67999
Q ss_pred EEeccCCCCCCCc-----ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCC-ceEEecccCccccCc
Q 041479 602 YEFMHHGSLESCP-----RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDM-TAHMGDFGLTRFIPE 675 (771)
Q Consensus 602 ~e~~~~g~L~~~~-----~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~-~~kl~DfGla~~~~~ 675 (771)
+||..+|++.... ...+......+..|+..|+.|+|.. .++.|||+||+|.+++..+ ..|++|||+|.....
T Consensus 100 ~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~--~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~ 177 (601)
T KOG0590|consen 100 LSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPE--NGVTHRDIKPSNSLLDESGSALKIADFGLATAYRN 177 (601)
T ss_pred cCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcc--cccccCCCCCccchhccCCCcccCCCchhhccccc
Confidence 9999999987653 1345567788999999999999932 4899999999999999999 999999999987655
Q ss_pred -ccCCcccccccccc-cccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCC--Cchh
Q 041479 676 -VMSSNQCSSVGLKG-TVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALP--DQIL 735 (771)
Q Consensus 676 -~~~~~~~~~~~~~g-t~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~--~~~~ 735 (771)
... .......+| ++.|+||| .|+++.-+++|..||+...........|...... ....
T Consensus 178 ~~g~--~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (601)
T KOG0590|consen 178 KNGA--ERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGRFTQLPW 255 (601)
T ss_pred cCCc--ceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeecccccccccCcc
Confidence 332 223334567 99999999 3999999999999997654444334444433211 2222
Q ss_pred hhcCccccccCcccChhchhhcCCHHHHH
Q 041479 736 QVLDPLFLVGGVQEGEETAEENIKKGQIR 764 (771)
Q Consensus 736 ~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl 764 (771)
..++........+++..+|+.|.+.+++-
T Consensus 256 ~~~~~~~~~~l~k~l~~~~~~r~s~~~~~ 284 (601)
T KOG0590|consen 256 NSISDQAHDLLHKILKENPSNRLSIEELK 284 (601)
T ss_pred ccCChhhhhcccccccCCchhcccccccc
Confidence 33333333344477889999999988764
No 461
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.27 E-value=7.2e-13 Score=140.87 Aligned_cols=156 Identities=24% Similarity=0.298 Sum_probs=111.3
Q ss_pred eEEEEEEeccCCCCCCC------cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCc
Q 041479 597 FRALVYEFMHHGSLESC------PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLT 670 (771)
Q Consensus 597 ~~~lv~e~~~~g~L~~~------~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla 670 (771)
+.||.|++|...+|.++ ....++.....++.|++.|++| . +.+|||+||.||....+..+||.|||+.
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k---~~ihrdlkp~nif~~~d~q~kIgDFgl~ 403 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---K---GLIHRDLKPSNIFFSDDDQLKIGDFGLV 403 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---c---cchhhhccccccccccchhhhhhhhhhe
Confidence 57899999999999887 2346677889999999999999 2 8999999999999999999999999998
Q ss_pred cccCcccCC--cccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCC
Q 041479 671 RFIPEVMSS--NQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPD 732 (771)
Q Consensus 671 ~~~~~~~~~--~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~ 732 (771)
..+....+. .....+.-+||..||+|| +|++++|+++ -..+++- ...+.++..+.+|+
T Consensus 404 ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er----~~t~~d~r~g~ip~ 479 (516)
T KOG1033|consen 404 TSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFER----IATLTDIRDGIIPP 479 (516)
T ss_pred eecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHH----HHhhhhhhcCCCCh
Confidence 765543311 112234557999999999 6999999998 3333322 12244445555553
Q ss_pred chhhhcCccccccCcccChhchhhcCCHHHH
Q 041479 733 QILQVLDPLFLVGGVQEGEETAEENIKKGQI 763 (771)
Q Consensus 733 ~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~v 763 (771)
....-.... .....+++.+.|.+||++.++
T Consensus 480 ~~~~d~p~e-~~ll~~lls~~p~~RP~~~~~ 509 (516)
T KOG1033|consen 480 EFLQDYPEE-YTLLQQLLSPSPEERPSAIEV 509 (516)
T ss_pred HHhhcCcHH-HHHHHHhcCCCcccCchHHHH
Confidence 322221111 123347889999999955544
No 462
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.22 E-value=5.8e-11 Score=114.51 Aligned_cols=129 Identities=17% Similarity=0.106 Sum_probs=94.2
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCcee-EEEEeecCCCCCceeEEEEEEec
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVK-IITACSTSDFQGNYFRALVYEFM 605 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~-l~~~~~~~~~~~~~~~~lv~e~~ 605 (771)
..++.|..+.||+++.. ++.|++|....... ....+.+|+.+++.+.+.++++ ++++..+ ..++||||+
T Consensus 4 ~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~~~-------~~~lv~e~i 73 (170)
T cd05151 4 SPLKGGMTNKNYRVEVA--NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFDPE-------TGVLITEFI 73 (170)
T ss_pred eecCCcccCceEEEEEC--CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEeCC-------CCeEEEEec
Confidence 34678889999999865 55899999754422 2345678999999987655554 4443221 237999999
Q ss_pred cCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHhcC--CCCeEecCCCCCCeeeCCCCceEEecccCcc
Q 041479 606 HHGSLESCPRILSFLRRLNIAIDVASALEYLHHHC--KKPIVHCDLKPSNVLLDNDMTAHMGDFGLTR 671 (771)
Q Consensus 606 ~~g~L~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~--~~~ivHrdlk~~NILl~~~~~~kl~DfGla~ 671 (771)
+|.++... ......+..+++++++.||+.. ..+++|+|++|.||+++ ++.++++|||.+.
T Consensus 74 ~G~~l~~~-----~~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~ 135 (170)
T cd05151 74 EGSELLTE-----DFSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG 135 (170)
T ss_pred CCCccccc-----cccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence 99888653 1112345678999999999862 22369999999999999 6689999999876
No 463
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.21 E-value=2.6e-12 Score=128.09 Aligned_cols=189 Identities=19% Similarity=0.219 Sum_probs=121.5
Q ss_pred HHhccCCCCceeEEEEeecCCCCCceeEEEEEEeccCCCCCCC-------cccCCHHHHHHHHHHHHHHHHHHHhcCCCC
Q 041479 571 ALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESC-------PRILSFLRRLNIAIDVASALEYLHHHCKKP 643 (771)
Q Consensus 571 ~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~-------~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ 643 (771)
.+-++-|.|||+++.|+.+..+.+.....++.|||+.|++.++ ...+......+++.||..||.|||+ |.|+
T Consensus 120 nllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs-~~Pp 198 (458)
T KOG1266|consen 120 NLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHS-CDPP 198 (458)
T ss_pred HHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhc-cCCc
Confidence 4455679999999999987765555677899999999999877 3346666778899999999999998 5799
Q ss_pred eEecCCCCCCeeeCCCCceEEecccCccccCcccCCcccccccccccccccchh---------------HHHHHHHHHhC
Q 041479 644 IVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTG 708 (771)
Q Consensus 644 ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg 708 (771)
|+|+++..+-|.+..+|-+|+.--.-...-...............|-++|.||| ||+...||..+
T Consensus 199 iihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemail 278 (458)
T KOG1266|consen 199 IIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAIL 278 (458)
T ss_pred cccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHh
Confidence 999999999999999888887522111100000110111111234678899999 57777777666
Q ss_pred CCCCCccccCCccHHHHHHhhCCCchhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 709 KRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 709 ~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
+.-.....+ .. ..+..............+ +....+|++..|..||+|++++.
T Consensus 279 Eiq~tnseS-~~-~~ee~ia~~i~~len~lq---r~~i~kcl~~eP~~rp~ar~llf 330 (458)
T KOG1266|consen 279 EIQSTNSES-KV-EVEENIANVIIGLENGLQ---RGSITKCLEGEPNGRPDARLLLF 330 (458)
T ss_pred eeccCCCcc-ee-ehhhhhhhheeeccCccc---cCcCcccccCCCCCCcchhhhhc
Confidence 543211100 00 001000001111111111 23345999999999999999864
No 464
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.17 E-value=1.4e-10 Score=129.58 Aligned_cols=139 Identities=17% Similarity=0.094 Sum_probs=92.1
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeeccchh----------------------------------hH------HHHH
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLHQRG----------------------------------AL------KSFM 566 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~----------------------------------~~------~~~~ 566 (771)
.++|+++.|.||+|+++++|+.||||+.+.+... .. -+|.
T Consensus 125 ~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~~ElD~~ 204 (537)
T PRK04750 125 KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLHDELDLM 204 (537)
T ss_pred hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHhhCHH
Confidence 5799999999999999987789999999754210 00 1356
Q ss_pred HHHHHHhccC----CCCceeEEEEeecCCCCCceeEEEEEEeccCCCCCCCc----ccCCHHHHHHHHHHHHHH-HHHHH
Q 041479 567 AECQALRNIR----HRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESCP----RILSFLRRLNIAIDVASA-LEYLH 637 (771)
Q Consensus 567 ~E~~~l~~l~----H~nIv~l~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~~----~~l~~~~~~~i~~~ia~g-L~~LH 637 (771)
+|+..+.+++ +...|.+-.++.+-.. ..++||||++|+.+.+.. ...+ +..++...+.. +.-++
T Consensus 205 ~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st----~~VLvmE~i~G~~l~d~~~l~~~g~d---~~~la~~~v~~~~~Qif 277 (537)
T PRK04750 205 REAANASQLRRNFEDSDMLYVPEVYWDYCS----ETVMVMERMYGIPVSDVAALRAAGTD---MKLLAERGVEVFFTQVF 277 (537)
T ss_pred HHHHHHHHHHHHccCCCCeecceeecccCC----CceEEEeeecCccHHhHHHHHhcCCC---HHHHHHHHHHHHHHHHH
Confidence 6776666663 4444554444433111 358999999999986541 1111 11222222111 12223
Q ss_pred hcCCCCeEecCCCCCCeeeCCCC----ceEEecccCccccCc
Q 041479 638 HHCKKPIVHCDLKPSNVLLDNDM----TAHMGDFGLTRFIPE 675 (771)
Q Consensus 638 ~~~~~~ivHrdlk~~NILl~~~~----~~kl~DfGla~~~~~ 675 (771)
. .|++|+|+||.||+++.++ ++++.|||++..+++
T Consensus 278 ~---~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 278 R---DGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred h---CCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 3 3899999999999999887 999999999987654
No 465
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.16 E-value=5.6e-12 Score=130.35 Aligned_cols=206 Identities=20% Similarity=0.288 Sum_probs=112.4
Q ss_pred CcEEEEEcCCCCCcccCC--ccccCCCCCcEEEcCCCccccc--CCccccCCCCCCEEecccCcCcccCCcccccCCccc
Q 041479 44 QRVILLNLSGQNLTGTAS--PYIGNLTFLRLINLQQNNFSSN--IPHEIGRLFRLRHIIFNSNALQGQIPDSRLILNKLE 119 (771)
Q Consensus 44 ~~l~~L~Ls~n~l~~~~~--~~~~~l~~L~~L~Ls~N~l~~~--~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~l~~n~l~ 119 (771)
++++.+.|.+..+. ..+ .....|++++.||||+|-|+.- +-.-...|++|+.|+|+.|++.-..
T Consensus 121 kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~----------- 188 (505)
T KOG3207|consen 121 KKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFI----------- 188 (505)
T ss_pred HhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCc-----------
Confidence 44555555555554 222 2444566666666666655531 2223445566666666666643100
Q ss_pred ccCCccccCCCCCCEEecccccCcCCCCccceeeeccccccc-ccCccccCCCCCCEEecccCcCcc--cCChhhhhCCC
Q 041479 120 GNIPSELGSLLKFKGLGLANNYFTGPIPHLNMFQVSVYSLTG-SIPIQLLNITSMEYFHVSENQLVG--ELPPHIGFTLP 196 (771)
Q Consensus 120 ~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~L~~l~l~~n~l~~-~~p~~~~~l~~L~~L~Ls~N~l~g--~lp~~~~~~l~ 196 (771)
.+..++.+++|+.|.++.|.++. .+-..+..+++|+.|+|+.|...+ ..+.. .+.
T Consensus 189 -------------------~s~~~~~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~---i~~ 246 (505)
T KOG3207|consen 189 -------------------SSNTTLLLSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTK---ILQ 246 (505)
T ss_pred -------------------cccchhhhhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhh---hhh
Confidence 00011233445555555555542 122234567778888888774221 22222 346
Q ss_pred CCcEEEeecCcccccCC--ccccCCCCCCEEEccccccCCCC-CcC--cccccCCCCCcEEEccCccccccCC--hhhhh
Q 041479 197 NVRILLLAGNQFFGNIP--HSISNASKLEWLDFANNSLTGLI-PED--LDSLVNCTYLEVVSLSVNSLSGTLP--NSLAN 269 (771)
Q Consensus 197 ~L~~L~L~~N~l~~~~p--~~~~~l~~L~~L~Ls~N~l~~~~-p~~--~~~l~~l~~L~~L~Ls~N~l~~~~p--~~~~~ 269 (771)
.|+.|||++|++.. .+ ...+.++.|+.|+++.+.|+.+. |+. .+....+++|++|+++.|++. ..+ ..+..
T Consensus 247 ~L~~LdLs~N~li~-~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~-~w~sl~~l~~ 324 (505)
T KOG3207|consen 247 TLQELDLSNNNLID-FDQGYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIR-DWRSLNHLRT 324 (505)
T ss_pred HHhhccccCCcccc-cccccccccccchhhhhccccCcchhcCCCccchhhhcccccceeeecccCccc-cccccchhhc
Confidence 67888888887763 33 34567777888888888777542 211 122345678888888888885 332 12333
Q ss_pred cccccceeecccCcCcc
Q 041479 270 FSSHLRYLYMSANPISG 286 (771)
Q Consensus 270 l~~~L~~L~Ls~N~l~~ 286 (771)
+ .+|+.|.+..|.|+.
T Consensus 325 l-~nlk~l~~~~n~ln~ 340 (505)
T KOG3207|consen 325 L-ENLKHLRITLNYLNK 340 (505)
T ss_pred c-chhhhhhcccccccc
Confidence 3 368888888888873
No 466
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.16 E-value=2e-11 Score=115.99 Aligned_cols=63 Identities=21% Similarity=0.355 Sum_probs=16.3
Q ss_pred CCCCCEEecccCcCcccCChhhhhCCCCCcEEEeecCcccccCC-ccccCCCCCCEEEccccccC
Q 041479 170 ITSMEYFHVSENQLVGELPPHIGFTLPNVRILLLAGNQFFGNIP-HSISNASKLEWLDFANNSLT 233 (771)
Q Consensus 170 l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~ 233 (771)
++.|++|++++|.|+ .+++.+...+|+|+.|+|++|+|..... ..+..+++|+.|+|.+|.++
T Consensus 63 L~~L~~L~L~~N~I~-~i~~~l~~~lp~L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~ 126 (175)
T PF14580_consen 63 LPRLKTLDLSNNRIS-SISEGLDKNLPNLQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVC 126 (175)
T ss_dssp -TT--EEE--SS----S-CHHHHHH-TT--EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGG
T ss_pred hhhhhhcccCCCCCC-ccccchHHhCCcCCEEECcCCcCCChHHhHHHHcCCCcceeeccCCccc
Confidence 344444444444444 3433222234444444444444432111 22333444444444444443
No 467
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.15 E-value=2e-11 Score=138.94 Aligned_cols=192 Identities=23% Similarity=0.219 Sum_probs=116.7
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
+........|++|.||..+++.+.+.+|+|+-+ .. -+.+- ++.....|.+| =
T Consensus 85 f~~IklisngAygavylvrh~~trqrfa~kiNk-q~-----lilRn--ilt~a~npfvv--------------------g 136 (1205)
T KOG0606|consen 85 FNTIKLISNGAYGAVYLVRHKETRQRFAMKINK-QN-----LILRN--ILTFAGNPFVV--------------------G 136 (1205)
T ss_pred cceeEeeccCCCCceeeeeccccccchhhcccc-cc-----hhhhc--cccccCCccee--------------------c
Confidence 334445678899999999999999999995432 11 01110 22222333333 1
Q ss_pred EeccCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCC---
Q 041479 603 EFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSS--- 679 (771)
Q Consensus 603 e~~~~g~L~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~--- 679 (771)
+ ..++......++. +.+.+++|+|+- +|+|||+||+|.+|..-|++|++|||+++.--.....
T Consensus 137 D---c~tllk~~g~lPv--------dmvla~Eylh~y---givhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~ 202 (1205)
T KOG0606|consen 137 D---CATLLKNIGPLPV--------DMVLAVEYLHSY---GIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLK 202 (1205)
T ss_pred h---hhhhcccCCCCcc--------hhhHHhHhhccC---CeecCCCCCCcceeeecccccccchhhhhhhhhhccchhh
Confidence 1 1122111222322 237899999985 9999999999999999999999999998742111100
Q ss_pred --------cccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhh--CCCch
Q 041479 680 --------NQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMA--LPDQI 734 (771)
Q Consensus 680 --------~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~--~~~~~ 734 (771)
......+++||+.|+||| +|+++||.+-|..||.+-..++. +-+++.-. +++.
T Consensus 203 eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeel-fg~visd~i~wpE~- 280 (1205)
T KOG0606|consen 203 EGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEEL-FGQVISDDIEWPEE- 280 (1205)
T ss_pred hcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHH-Hhhhhhhhcccccc-
Confidence 011123578999999999 59999999999999975422211 22222111 1222
Q ss_pred hhhcCccccccCcccChhchhhcC
Q 041479 735 LQVLDPLFLVGGVQEGEETAEENI 758 (771)
Q Consensus 735 ~~~~~~~~~~~~~~cl~~~p~~Rp 758 (771)
.+...++.+..+.+.++.+|..|-
T Consensus 281 dea~p~Ea~dli~~LL~qnp~~Rl 304 (1205)
T KOG0606|consen 281 DEALPPEAQDLIEQLLRQNPLCRL 304 (1205)
T ss_pred CcCCCHHHHHHHHHHHHhChHhhc
Confidence 333333333344466677777774
No 468
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.13 E-value=8.6e-12 Score=138.04 Aligned_cols=196 Identities=25% Similarity=0.339 Sum_probs=119.7
Q ss_pred CCCCCCEEecccccCcCCCCccceeeecccccccccCccccCCCCCCEEecccCcCcccCChhhhhCCCCCcEEEeecCc
Q 041479 128 SLLKFKGLGLANNYFTGPIPHLNMFQVSVYSLTGSIPIQLLNITSMEYFHVSENQLVGELPPHIGFTLPNVRILLLAGNQ 207 (771)
Q Consensus 128 ~l~~L~~L~Ls~N~l~~~lp~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~N~ 207 (771)
.+..++.+++..|.++ .+-..+..+++|+.|++.+|+|. .+...+. .+++|++|++++|+
T Consensus 70 ~l~~l~~l~l~~n~i~------------------~~~~~l~~~~~l~~l~l~~n~i~-~i~~~l~-~~~~L~~L~ls~N~ 129 (414)
T KOG0531|consen 70 SLTSLKELNLRQNLIA------------------KILNHLSKLKSLEALDLYDNKIE-KIENLLS-SLVNLQVLDLSFNK 129 (414)
T ss_pred HhHhHHhhccchhhhh------------------hhhcccccccceeeeeccccchh-hcccchh-hhhcchheeccccc
Confidence 4455566667777665 12233667788889999999988 5554333 67889999999999
Q ss_pred ccccCCccccCCCCCCEEEccccccCCCCCcCcccccCCCCCcEEEccCccccccCChh-hhhcccccceeecccCcCcc
Q 041479 208 FFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSLSGTLPNS-LANFSSHLRYLYMSANPISG 286 (771)
Q Consensus 208 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~~L~~L~Ls~N~l~~ 286 (771)
|+.+. .+..++.|+.|++++|.|+.+ ..+..++.|+.+++++|.+. .+... ...+. +++.+++++|.+..
T Consensus 130 I~~i~--~l~~l~~L~~L~l~~N~i~~~-----~~~~~l~~L~~l~l~~n~i~-~ie~~~~~~~~-~l~~l~l~~n~i~~ 200 (414)
T KOG0531|consen 130 ITKLE--GLSTLTLLKELNLSGNLISDI-----SGLESLKSLKLLDLSYNRIV-DIENDELSELI-SLEELDLGGNSIRE 200 (414)
T ss_pred ccccc--chhhccchhhheeccCcchhc-----cCCccchhhhcccCCcchhh-hhhhhhhhhcc-chHHHhccCCchhc
Confidence 88654 356677788899999988754 33355788888888888887 33331 24444 68888888888863
Q ss_pred cCcccccccCCcceEecCCccceeccCccccCCC--CCCEEEccCCcccccCCcccccccccccccccCccce
Q 041479 287 SIPTEIGNLKNLIIIAIEKFILIRNIPISVGYLL--KLQVLSLFENNISREIPSSLGNFTFLTELNLCGNSIR 357 (771)
Q Consensus 287 ~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~--~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 357 (771)
...+..+..+..+++..|.+...-+. ..+. .|+.+++++|.+. ..+..+..+..+..|++.+|++.
T Consensus 201 --i~~~~~~~~l~~~~l~~n~i~~~~~l--~~~~~~~L~~l~l~~n~i~-~~~~~~~~~~~l~~l~~~~n~~~ 268 (414)
T KOG0531|consen 201 --IEGLDLLKKLVLLSLLDNKISKLEGL--NELVMLHLRELYLSGNRIS-RSPEGLENLKNLPVLDLSSNRIS 268 (414)
T ss_pred --ccchHHHHHHHHhhcccccceeccCc--ccchhHHHHHHhcccCccc-cccccccccccccccchhhcccc
Confidence 23334444444445555555332211 1111 2455555555554 22234444455555555555554
No 469
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.11 E-value=5.7e-12 Score=130.32 Aligned_cols=162 Identities=27% Similarity=0.317 Sum_probs=85.2
Q ss_pred cCCCCCCEEecccCcCcccCCh-hhhhCCCCCcEEEeecCcccccCC--ccccCCCCCCEEEccccccCCCCCcCccccc
Q 041479 168 LNITSMEYFHVSENQLVGELPP-HIGFTLPNVRILLLAGNQFFGNIP--HSISNASKLEWLDFANNSLTGLIPEDLDSLV 244 (771)
Q Consensus 168 ~~l~~L~~L~Ls~N~l~g~lp~-~~~~~l~~L~~L~L~~N~l~~~~p--~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 244 (771)
.++.+|+...|.+.... ..+. .....+++++.|||++|-|....| .....|++|+.|+|+.|++......... .
T Consensus 118 sn~kkL~~IsLdn~~V~-~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~~--~ 194 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVE-DAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNTT--L 194 (505)
T ss_pred hhHHhhhheeecCcccc-ccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccch--h
Confidence 45667777777777665 3332 223367777777777777764332 2245667777777777777633222111 2
Q ss_pred CCCCCcEEEccCcccccc-CChhhhhcccccceeecccCcCcccCcccccccCCcceEecCCccceeccCccccCCCCCC
Q 041479 245 NCTYLEVVSLSVNSLSGT-LPNSLANFSSHLRYLYMSANPISGSIPTEIGNLKNLIIIAIEKFILIRNIPISVGYLLKLQ 323 (771)
Q Consensus 245 ~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~ 323 (771)
.++.|+.|.|+.|.|+.. +-..+..++ +|+.|+|..|...... ..+...+..|+
T Consensus 195 ~l~~lK~L~l~~CGls~k~V~~~~~~fP-sl~~L~L~~N~~~~~~------------------------~~~~~i~~~L~ 249 (505)
T KOG3207|consen 195 LLSHLKQLVLNSCGLSWKDVQWILLTFP-SLEVLYLEANEIILIK------------------------ATSTKILQTLQ 249 (505)
T ss_pred hhhhhheEEeccCCCCHHHHHHHHHhCC-cHHHhhhhccccccee------------------------cchhhhhhHHh
Confidence 345556666666655521 111122222 4555555555422122 22233344556
Q ss_pred EEEccCCcccccCC--cccccccccccccccCcccee
Q 041479 324 VLSLFENNISREIP--SSLGNFTFLTELNLCGNSIRG 358 (771)
Q Consensus 324 ~L~Ls~N~l~~~~p--~~~~~l~~L~~L~Ls~N~l~~ 358 (771)
+|||++|++- ..+ ...+.++.|..|+++.+.|..
T Consensus 250 ~LdLs~N~li-~~~~~~~~~~l~~L~~Lnls~tgi~s 285 (505)
T KOG3207|consen 250 ELDLSNNNLI-DFDQGYKVGTLPGLNQLNLSSTGIAS 285 (505)
T ss_pred hccccCCccc-ccccccccccccchhhhhccccCcch
Confidence 6666666554 222 244556666666666666653
No 470
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.09 E-value=1.1e-09 Score=106.38 Aligned_cols=133 Identities=18% Similarity=0.107 Sum_probs=94.6
Q ss_pred ccccccccceEEEEEecC------CCeEEEEEEeeccc------------h----------hhHHHH----HHHHHHHhc
Q 041479 527 VSYESLVKATVYKGILDL------DQTFIAVKVLFLHQ------------R----------GALKSF----MAECQALRN 574 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~------~~~~vAvK~~~~~~------------~----------~~~~~~----~~E~~~l~~ 574 (771)
+.+++|..|.||.|...+ .+..+|||+.+... . ...+.+ .+|.+.|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 457889999999998654 24599999995321 0 012222 389999999
Q ss_pred cC--CCCceeEEEEeecCCCCCceeEEEEEEeccCCCCCCC-c--ccCCHHHHHHHHHHHHHHHHHH-HhcCCCCeEecC
Q 041479 575 IR--HRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESC-P--RILSFLRRLNIAIDVASALEYL-HHHCKKPIVHCD 648 (771)
Q Consensus 575 l~--H~nIv~l~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~-~--~~l~~~~~~~i~~~ia~gL~~L-H~~~~~~ivHrd 648 (771)
+. .-++-+.+++ .. -++||||+.++.+... . ..++..+...+..+++.++..+ |.. +|||+|
T Consensus 83 l~~~Gv~vP~pi~~--~~-------~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~---glVHGD 150 (197)
T cd05146 83 MQKAGIPCPEVVVL--KK-------HVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKEC---NLVHAD 150 (197)
T ss_pred HHHcCCCCCeEEEe--cC-------CEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHhC---CeecCC
Confidence 85 3466666654 22 3799999976544211 1 1234445667788999999999 553 999999
Q ss_pred CCCCCeeeCCCCceEEecccCccc
Q 041479 649 LKPSNVLLDNDMTAHMGDFGLTRF 672 (771)
Q Consensus 649 lk~~NILl~~~~~~kl~DfGla~~ 672 (771)
+++.||+++ ++.+.++|||-|..
T Consensus 151 Ls~~NIL~~-~~~v~iIDF~qav~ 173 (197)
T cd05146 151 LSEYNMLWH-DGKVWFIDVSQSVE 173 (197)
T ss_pred CCHHHEEEE-CCcEEEEECCCcee
Confidence 999999997 46899999997753
No 471
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.09 E-value=1.2e-11 Score=136.78 Aligned_cols=247 Identities=26% Similarity=0.306 Sum_probs=143.3
Q ss_pred cCCCCCCEEecccCcCcccCChhhhhCCCCCcEEEeecCcccccCCccccCCCCCCEEEccccccCCCCCcCcccccCCC
Q 041479 168 LNITSMEYFHVSENQLVGELPPHIGFTLPNVRILLLAGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCT 247 (771)
Q Consensus 168 ~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~ 247 (771)
..+..++.+++..|.+. .+-..+. .+.+|+.|++..|+|..+. ..+..+++|++|++++|+|+.+. ++..++
T Consensus 69 ~~l~~l~~l~l~~n~i~-~~~~~l~-~~~~l~~l~l~~n~i~~i~-~~l~~~~~L~~L~ls~N~I~~i~-----~l~~l~ 140 (414)
T KOG0531|consen 69 ESLTSLKELNLRQNLIA-KILNHLS-KLKSLEALDLYDNKIEKIE-NLLSSLVNLQVLDLSFNKITKLE-----GLSTLT 140 (414)
T ss_pred HHhHhHHhhccchhhhh-hhhcccc-cccceeeeeccccchhhcc-cchhhhhcchheecccccccccc-----chhhcc
Confidence 34566777778888887 4333343 6778888888888888433 33677888888888888887653 336667
Q ss_pred CCcEEEccCccccccCChhhhhcccccceeecccCcCcccCccc-ccccCCcceEecCCccceeccCccccCCCCCCEEE
Q 041479 248 YLEVVSLSVNSLSGTLPNSLANFSSHLRYLYMSANPISGSIPTE-IGNLKNLIIIAIEKFILIRNIPISVGYLLKLQVLS 326 (771)
Q Consensus 248 ~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 326 (771)
.|+.|++++|.|+ .+.. +..+. +|+.+++++|++...-+ . ...+.+++.+++.+|.+... ..+..+..+..++
T Consensus 141 ~L~~L~l~~N~i~-~~~~-~~~l~-~L~~l~l~~n~i~~ie~-~~~~~~~~l~~l~l~~n~i~~i--~~~~~~~~l~~~~ 214 (414)
T KOG0531|consen 141 LLKELNLSGNLIS-DISG-LESLK-SLKLLDLSYNRIVDIEN-DELSELISLEELDLGGNSIREI--EGLDLLKKLVLLS 214 (414)
T ss_pred chhhheeccCcch-hccC-Cccch-hhhcccCCcchhhhhhh-hhhhhccchHHHhccCCchhcc--cchHHHHHHHHhh
Confidence 7888888888887 4332 33333 68888888888874433 2 46666777777777766432 2333444555556
Q ss_pred ccCCcccccCCccccccc--ccccccccCccceecCCcccccccce-eeecccCcccCCCCcCCCCCCCCCeEECCCCcc
Q 041479 327 LFENNISREIPSSLGNFT--FLTELNLCGNSIRGSVPSALGSCHQL-WLDLSHNHLTGPIPLAVGNPKSIPHLDLSKNEL 403 (771)
Q Consensus 327 Ls~N~l~~~~p~~~~~l~--~L~~L~Ls~N~l~~~~p~~~~~l~~l-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 403 (771)
+..|+++..-+ +..+. .|+.+++++|++. ..+..+..+..+ .+++++|++...-. +.....+..+.++.|++
T Consensus 215 l~~n~i~~~~~--l~~~~~~~L~~l~l~~n~i~-~~~~~~~~~~~l~~l~~~~n~~~~~~~--~~~~~~~~~~~~~~~~~ 289 (414)
T KOG0531|consen 215 LLDNKISKLEG--LNELVMLHLRELYLSGNRIS-RSPEGLENLKNLPVLDLSSNRISNLEG--LERLPKLSELWLNDNKL 289 (414)
T ss_pred cccccceeccC--cccchhHHHHHHhcccCccc-cccccccccccccccchhhcccccccc--ccccchHHHhccCcchh
Confidence 77777764322 22222 2677777777776 232334444444 56666666653221 23344455555555555
Q ss_pred cccCCcchhhhhcccccccEEECcCCCCCC
Q 041479 404 SGEIPSSLAWIFGYISIFAKLNLSYNNLDG 433 (771)
Q Consensus 404 ~~~~p~~l~~~~~~l~~L~~L~Ls~N~l~~ 433 (771)
....-..-.......+.++.+.+.+|++..
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (414)
T KOG0531|consen 290 ALSEAISQEYITSAAPTLVTLTLELNPIRK 319 (414)
T ss_pred cchhhhhccccccccccccccccccCcccc
Confidence 421100000001234455555555555543
No 472
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.07 E-value=6e-11 Score=128.93 Aligned_cols=227 Identities=24% Similarity=0.173 Sum_probs=166.8
Q ss_pred cccc--cccceEEEEEe--cCCCeEEEEEEeec--cchhhHHHHHHHHHHHhccC-CCCceeEEEEeecCCCCCceeEEE
Q 041479 528 SYES--LVKATVYKGIL--DLDQTFIAVKVLFL--HQRGALKSFMAECQALRNIR-HRNLVKIITACSTSDFQGNYFRAL 600 (771)
Q Consensus 528 ~l~~--~~~~~Vy~~~~--~~~~~~vAvK~~~~--~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~~~~~~l 600 (771)
.+|. |.+|.||++.. +.+...+|+|+-+. .......+=.+|+....+++ |+|.|+.+..+.+.+ ..|+
T Consensus 121 ~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~-----~lfi 195 (524)
T KOG0601|consen 121 RTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSG-----ILFI 195 (524)
T ss_pred ccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCC-----ccee
Confidence 3455 99999999998 88888999998532 22344455567888888886 999999888877776 6788
Q ss_pred EEEeccCCCCCCC----cccCCHHHHHHHHHHHHH----HHHHHHhcCCCCeEecCCCCCCeeeCCC-CceEEecccCcc
Q 041479 601 VYEFMHHGSLESC----PRILSFLRRLNIAIDVAS----ALEYLHHHCKKPIVHCDLKPSNVLLDND-MTAHMGDFGLTR 671 (771)
Q Consensus 601 v~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~----gL~~LH~~~~~~ivHrdlk~~NILl~~~-~~~kl~DfGla~ 671 (771)
-.|++. .++.++ ...++....+.+..+..+ |+.++|+. .++|-|+||.||....+ ...+.+|||+..
T Consensus 196 qtE~~~-~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~---~~~~~~~kp~~i~~~~~~~s~~~~df~~v~ 271 (524)
T KOG0601|consen 196 QTELCG-ESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSN---NIVHDDLKPANIFTTSDWTSCKLTDFGLVS 271 (524)
T ss_pred eecccc-chhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCC---cccccccchhheecccccceeecCCcceeE
Confidence 889885 566555 233667777888888888 99999985 89999999999999988 889999999998
Q ss_pred ccCcccCCcccc-cccccccccccchh--------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhh
Q 041479 672 FIPEVMSSNQCS-SVGLKGTVGYATPE--------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQ 736 (771)
Q Consensus 672 ~~~~~~~~~~~~-~~~~~gt~~y~aPE--------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 736 (771)
.+.......... .....|...|++|| +|.+..|...+..+...-+ ...+.+...+..+.+..+
T Consensus 272 ~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~--~~~W~~~r~~~ip~e~~~ 349 (524)
T KOG0601|consen 272 KISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGK--NSSWSQLRQGYIPLEFCE 349 (524)
T ss_pred EccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCC--CCCccccccccCchhhhc
Confidence 776654322211 12224677899999 5999999988876654211 123444455556666665
Q ss_pred hcCccccccCcccChhchhhcCCHHHHHH
Q 041479 737 VLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 737 ~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
..+..+.....+++..+|-.|++..++.+
T Consensus 350 ~~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 350 GGSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred CcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 55666655566889999999999877653
No 473
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.06 E-value=1.4e-10 Score=110.15 Aligned_cols=83 Identities=36% Similarity=0.476 Sum_probs=22.7
Q ss_pred CCCCCcEEEeecCcccccCCcccc-CCCCCCEEEccccccCCCCCcCcccccCCCCCcEEEccCccccccCChhhh-hcc
Q 041479 194 TLPNVRILLLAGNQFFGNIPHSIS-NASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSLSGTLPNSLA-NFS 271 (771)
Q Consensus 194 ~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~-~l~ 271 (771)
+...++.|+|++|+|+.+. .++ .+.+|+.|||++|.|+.+ ..+..+++|++|++++|+|+ .++..+. .++
T Consensus 17 n~~~~~~L~L~~n~I~~Ie--~L~~~l~~L~~L~Ls~N~I~~l-----~~l~~L~~L~~L~L~~N~I~-~i~~~l~~~lp 88 (175)
T PF14580_consen 17 NPVKLRELNLRGNQISTIE--NLGATLDKLEVLDLSNNQITKL-----EGLPGLPRLKTLDLSNNRIS-SISEGLDKNLP 88 (175)
T ss_dssp ---------------------S--TT-TT--EEE-TTS--S-------TT----TT--EEE--SS----S-CHHHHHH-T
T ss_pred ccccccccccccccccccc--chhhhhcCCCEEECCCCCCccc-----cCccChhhhhhcccCCCCCC-ccccchHHhCC
Confidence 3445677777777776432 344 466777777777777744 23466677777777777777 5554443 343
Q ss_pred cccceeecccCcCc
Q 041479 272 SHLRYLYMSANPIS 285 (771)
Q Consensus 272 ~~L~~L~Ls~N~l~ 285 (771)
+|+.|++++|+|.
T Consensus 89 -~L~~L~L~~N~I~ 101 (175)
T PF14580_consen 89 -NLQELYLSNNKIS 101 (175)
T ss_dssp -T--EEE-TTS---
T ss_pred -cCCEEECcCCcCC
Confidence 6777777777776
No 474
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.05 E-value=4.4e-11 Score=117.69 Aligned_cols=130 Identities=26% Similarity=0.333 Sum_probs=77.5
Q ss_pred CCCCcEEEeecCcccccCCccccCCCCCCEEEccccccCCCCCcCcccccCCCCCcEEEccCccccccCChhhhhccccc
Q 041479 195 LPNVRILLLAGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSLSGTLPNSLANFSSHL 274 (771)
Q Consensus 195 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L 274 (771)
...|+.+|||+|.|+ .+..+..-+++++.|++|+|.|+.+ +++..+++|+.||||+|.++ .+..+-..+- ++
T Consensus 283 Wq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v-----~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLG-NI 354 (490)
T KOG1259|consen 283 WQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTV-----QNLAELPQLQLLDLSGNLLA-ECVGWHLKLG-NI 354 (490)
T ss_pred Hhhhhhccccccchh-hhhhhhhhccceeEEeccccceeee-----hhhhhcccceEeecccchhH-hhhhhHhhhc-CE
Confidence 345666666666666 4555566666666666666666532 33455666666666666665 3333333333 56
Q ss_pred ceeecccCcCcccCcccccccCCcceEecCCccceeccCccccCCCCCCEEEccCCcccccC-CcccccccccccccccC
Q 041479 275 RYLYMSANPISGSIPTEIGNLKNLIIIAIEKFILIRNIPISVGYLLKLQVLSLFENNISREI-PSSLGNFTFLTELNLCG 353 (771)
Q Consensus 275 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~ 353 (771)
+.|.|++|.|.. + ..+..+-+|..||+++|+|.... -..+++++-|++|.|.+
T Consensus 355 KtL~La~N~iE~-----L---------------------SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~ 408 (490)
T KOG1259|consen 355 KTLKLAQNKIET-----L---------------------SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTG 408 (490)
T ss_pred eeeehhhhhHhh-----h---------------------hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcC
Confidence 666666666651 1 12334556666777777765321 23677788888888888
Q ss_pred cccee
Q 041479 354 NSIRG 358 (771)
Q Consensus 354 N~l~~ 358 (771)
|.|.+
T Consensus 409 NPl~~ 413 (490)
T KOG1259|consen 409 NPLAG 413 (490)
T ss_pred CCccc
Confidence 88873
No 475
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=98.99 E-value=9.1e-11 Score=115.49 Aligned_cols=135 Identities=21% Similarity=0.270 Sum_probs=96.1
Q ss_pred ccccCCCCCCEEecccCcCcccCChhhhhCCCCCcEEEeecCcccccCCccccCCCCCCEEEccccccCCCCCcCccccc
Q 041479 165 IQLLNITSMEYFHVSENQLVGELPPHIGFTLPNVRILLLAGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLV 244 (771)
Q Consensus 165 ~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 244 (771)
..+..+..|+++|||+|.|+ .+.+++. -+|.++.|++|+|.|..+ +.+..+++|+.||||+|.++.... +- .
T Consensus 278 ~~~dTWq~LtelDLS~N~I~-~iDESvK-L~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls~~~G-wh---~ 349 (490)
T KOG1259|consen 278 VSADTWQELTELDLSGNLIT-QIDESVK-LAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLAECVG-WH---L 349 (490)
T ss_pred EecchHhhhhhccccccchh-hhhhhhh-hccceeEEeccccceeee--hhhhhcccceEeecccchhHhhhh-hH---h
Confidence 34445667888888888887 7777665 678888888888888732 347778888888888888875421 21 4
Q ss_pred CCCCCcEEEccCccccccCChhhhhcccccceeecccCcCcccC-cccccccCCcceEecCCcccee
Q 041479 245 NCTYLEVVSLSVNSLSGTLPNSLANFSSHLRYLYMSANPISGSI-PTEIGNLKNLIIIAIEKFILIR 310 (771)
Q Consensus 245 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~l~~n~l~~ 310 (771)
.+-+.+.|.|+.|.|. .+ ..+..+- +|.+||+++|+|...- -..+++++.|+.+.|.+|.+.+
T Consensus 350 KLGNIKtL~La~N~iE-~L-SGL~KLY-SLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~ 413 (490)
T KOG1259|consen 350 KLGNIKTLKLAQNKIE-TL-SGLRKLY-SLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAG 413 (490)
T ss_pred hhcCEeeeehhhhhHh-hh-hhhHhhh-hheeccccccchhhHHHhcccccccHHHHHhhcCCCccc
Confidence 5667788888888876 33 2355555 5888888888887322 2467888888888888887754
No 476
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=98.96 E-value=8.1e-09 Score=104.19 Aligned_cols=141 Identities=18% Similarity=0.113 Sum_probs=107.8
Q ss_pred cccccccceEEEEEecCCCeEEEEEEeeccch-hhHHHHHHHHHHHhccCC--CCceeEEEEeecCCCCCceeEEEEEEe
Q 041479 528 SYESLVKATVYKGILDLDQTFIAVKVLFLHQR-GALKSFMAECQALRNIRH--RNLVKIITACSTSDFQGNYFRALVYEF 604 (771)
Q Consensus 528 ~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~H--~nIv~l~~~~~~~~~~~~~~~~lv~e~ 604 (771)
.++.|..+.||+++..+ ++.|++|....... ....++.+|+++++.+++ ..+.+++.+....... ...++||||
T Consensus 5 ~l~~G~~n~~~~v~~~~-g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~--~~~~~v~e~ 81 (223)
T cd05154 5 QLSGGQSNLTYLLTAGG-GRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVL--GTPFYVMER 81 (223)
T ss_pred ecCCCccceEEEEEecC-CcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCcc--CCceEEEEE
Confidence 46888899999998765 35899999854432 234678999999999975 4467777776543211 134899999
Q ss_pred ccCCCCCCCc--ccCCHHHHHHHHHHHHHHHHHHHhcC------------------------------------------
Q 041479 605 MHHGSLESCP--RILSFLRRLNIAIDVASALEYLHHHC------------------------------------------ 640 (771)
Q Consensus 605 ~~~g~L~~~~--~~l~~~~~~~i~~~ia~gL~~LH~~~------------------------------------------ 640 (771)
++|+++.... ..++..+...++.++++++.+||+..
T Consensus 82 i~G~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (223)
T cd05154 82 VDGRVLRDRLLRPELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERLL 161 (223)
T ss_pred eCCEecCCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHHH
Confidence 9999887653 35777888899999999999999531
Q ss_pred -----------CCCeEecCCCCCCeeeCC--CCceEEecccCcc
Q 041479 641 -----------KKPIVHCDLKPSNVLLDN--DMTAHMGDFGLTR 671 (771)
Q Consensus 641 -----------~~~ivHrdlk~~NILl~~--~~~~kl~DfGla~ 671 (771)
...++|+|++|.||+++. ++.+.|+||+.+.
T Consensus 162 ~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~ 205 (223)
T cd05154 162 RWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELAT 205 (223)
T ss_pred HHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEeccccc
Confidence 245799999999999998 5678999999775
No 477
>PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A.
Probab=98.92 E-value=5.6e-10 Score=79.90 Aligned_cols=40 Identities=55% Similarity=1.076 Sum_probs=31.1
Q ss_pred CccHHHHHHHHhcCCCCCCCCCCCCCCC--CCCccceeeeec
Q 041479 1 EPDKQALLAFKSKVDDDPFGALSTWNDS--VNFCQWLGVTCS 40 (771)
Q Consensus 1 ~~~~~~l~~~~~~~~~~~~~~~~~w~~~--~~~c~w~~v~c~ 40 (771)
++|++||++||+++..+|.+.+++|... .+||+|.||+|+
T Consensus 2 ~~d~~aLl~~k~~l~~~~~~~l~~W~~~~~~~~C~W~GV~Cd 43 (43)
T PF08263_consen 2 NQDRQALLAFKKSLNNDPSGVLSSWNPSSDSDPCSWSGVTCD 43 (43)
T ss_dssp HHHHHHHHHHHHCTT-SC-CCCTT--TT--S-CCCSTTEEE-
T ss_pred cHHHHHHHHHHHhcccccCcccccCCCcCCCCCeeeccEEeC
Confidence 3689999999999987788899999876 799999999995
No 478
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=98.92 E-value=3.6e-09 Score=116.18 Aligned_cols=161 Identities=18% Similarity=0.240 Sum_probs=116.3
Q ss_pred EE-EEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEeccCCCCCCCcc
Q 041479 537 VY-KGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESCPR 615 (771)
Q Consensus 537 Vy-~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~~~ 615 (771)
+| .|..+.++.+|.|...+.......+...+.++.++.+|||||+++++.+.+.+ ..|+|.|-+.- |..+.+
T Consensus 27 ~~~~~t~k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~-----~~ylvTErV~P--l~~~lk 99 (690)
T KOG1243|consen 27 LWPDGTRKADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEG-----TLYLVTERVRP--LETVLK 99 (690)
T ss_pred cccccceeccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccC-----ceEEEeecccc--HHHHHH
Confidence 44 46667777799999997766545566778889999999999999999987776 78999998752 222222
Q ss_pred cCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCcccccccccccccc--
Q 041479 616 ILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGY-- 693 (771)
Q Consensus 616 ~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y-- 693 (771)
.+......-.+.||+.||.|||+.| +++|++|.-+.|.++..|..||.+|-++............ ..---.|
T Consensus 100 ~l~~~~v~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~----~~~~~s~~~ 173 (690)
T KOG1243|consen 100 ELGKEEVCLGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKS----LYLIESFDD 173 (690)
T ss_pred HhHHHHHHHHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCccccc----chhhhcccC
Confidence 3344445555789999999999864 8999999999999999999999999887543332210000 0000112
Q ss_pred --------cchh---HHHHHHHHHhCCC
Q 041479 694 --------ATPE---YGILLLEIFTGKR 710 (771)
Q Consensus 694 --------~aPE---~Gv~l~el~tg~~ 710 (771)
+++| |||+++|++.|..
T Consensus 174 P~~~~~s~~s~D~~~Lg~li~el~ng~~ 201 (690)
T KOG1243|consen 174 PEEIDPSEWSIDSWGLGCLIEELFNGSL 201 (690)
T ss_pred hhhcCccccchhhhhHHHHHHHHhCccc
Confidence 3344 8999999999933
No 479
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=98.89 E-value=1.3e-10 Score=117.36 Aligned_cols=248 Identities=22% Similarity=0.266 Sum_probs=151.7
Q ss_pred cccCCCCCCEEecccCcCccc----CChhhhhCCCCCcEEEeecCc---ccccCC-------ccccCCCCCCEEEccccc
Q 041479 166 QLLNITSMEYFHVSENQLVGE----LPPHIGFTLPNVRILLLAGNQ---FFGNIP-------HSISNASKLEWLDFANNS 231 (771)
Q Consensus 166 ~~~~l~~L~~L~Ls~N~l~g~----lp~~~~~~l~~L~~L~L~~N~---l~~~~p-------~~~~~l~~L~~L~Ls~N~ 231 (771)
.+..+.+++.++||+|-+... +.+.+. +.++|+..+++.=- ....+| +++.+.++|++||||+|.
T Consensus 25 ~~~~~~s~~~l~lsgnt~G~EAa~~i~~~L~-~~~~L~~v~~sd~ftGR~~~Ei~e~L~~l~~aL~~~~~L~~ldLSDNA 103 (382)
T KOG1909|consen 25 ELEPMDSLTKLDLSGNTFGTEAARAIAKVLA-SKKELREVNLSDMFTGRLKDEIPEALKMLSKALLGCPKLQKLDLSDNA 103 (382)
T ss_pred HhcccCceEEEeccCCchhHHHHHHHHHHHh-hcccceeeehHhhhcCCcHHHHHHHHHHHHHHHhcCCceeEeeccccc
Confidence 455678899999999998521 222223 55677777776532 222233 334566789999999998
Q ss_pred cCCCCCcCccc-ccCCCCCcEEEccCccccccCChhhhh------------cccccceeecccCcCccc----Ccccccc
Q 041479 232 LTGLIPEDLDS-LVNCTYLEVVSLSVNSLSGTLPNSLAN------------FSSHLRYLYMSANPISGS----IPTEIGN 294 (771)
Q Consensus 232 l~~~~p~~~~~-l~~l~~L~~L~Ls~N~l~~~~p~~~~~------------l~~~L~~L~Ls~N~l~~~----~p~~~~~ 294 (771)
+..--++.|.. +.+++.|++|.|.+|.+...--..++. .+++|+.++.++|++... +...|..
T Consensus 104 ~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~rNrlen~ga~~~A~~~~~ 183 (382)
T KOG1909|consen 104 FGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGRNRLENGGATALAEAFQS 183 (382)
T ss_pred cCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeeccccccccHHHHHHHHHh
Confidence 87444444432 356788999999999875111111111 123678888888877632 2234556
Q ss_pred cCCcceEecCCccceec----cCccccCCCCCCEEEccCCccccc----CCcccccccccccccccCccceecCCccccc
Q 041479 295 LKNLIIIAIEKFILIRN----IPISVGYLLKLQVLSLFENNISRE----IPSSLGNFTFLTELNLCGNSIRGSVPSALGS 366 (771)
Q Consensus 295 l~~L~~L~l~~n~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 366 (771)
.+.|+.+.++.|.+... +-.++..+++|+.|||.+|.++.. +...++.+++|+.|+++++.+...-..+|..
T Consensus 184 ~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~~~Ga~a~~~ 263 (382)
T KOG1909|consen 184 HPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLENEGAIAFVD 263 (382)
T ss_pred ccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecccccccccccHHHHHH
Confidence 67777777777766321 223456677777777777776632 2334555666677777666665322222111
Q ss_pred ccceeeecccCcccCCCCcCCCCCCCCCeEECCCCcccccCCcchhhhhcccccccEEECcCCCCC
Q 041479 367 CHQLWLDLSHNHLTGPIPLAVGNPKSIPHLDLSKNELSGEIPSSLAWIFGYISIFAKLNLSYNNLD 432 (771)
Q Consensus 367 l~~l~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~l~~L~~L~Ls~N~l~ 432 (771)
.++ ...++|++|.|.+|.|+..--..+.......+.|..|+|++|.+.
T Consensus 264 -----------al~-------~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 264 -----------ALK-------ESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred -----------HHh-------ccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCccccc
Confidence 011 225789999999999984333333334446788999999999984
No 480
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.88 E-value=1.2e-09 Score=85.35 Aligned_cols=59 Identities=36% Similarity=0.573 Sum_probs=31.1
Q ss_pred CCCEEecccCcCcccCChhhhhCCCCCcEEEeecCcccccCCccccCCCCCCEEEccccc
Q 041479 172 SMEYFHVSENQLVGELPPHIGFTLPNVRILLLAGNQFFGNIPHSISNASKLEWLDFANNS 231 (771)
Q Consensus 172 ~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 231 (771)
+|++|++++|+++ .+|+..|..+++|++|++++|+|+.+.|+.|.++++|++|++++|+
T Consensus 2 ~L~~L~l~~n~l~-~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 2 NLESLDLSNNKLT-EIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp TESEEEETSSTES-EECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred cCcEEECCCCCCC-ccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 4455555555555 4555444455555555555555555555555555555555555554
No 481
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.87 E-value=1.5e-09 Score=84.79 Aligned_cols=60 Identities=30% Similarity=0.384 Sum_probs=45.3
Q ss_pred cEEEEEcCCCCCcccCCccccCCCCCcEEEcCCCcccccCCccccCCCCCCEEecccCcC
Q 041479 45 RVILLNLSGQNLTGTASPYIGNLTFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNAL 104 (771)
Q Consensus 45 ~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 104 (771)
+++.|++++|+++.+.+..|.++++|++|++++|+|+...|++|.++++|++|++++|+|
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 567777777777766667777777777777777777776677777777777777777764
No 482
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=98.83 E-value=1.2e-10 Score=117.58 Aligned_cols=255 Identities=20% Similarity=0.254 Sum_probs=129.6
Q ss_pred cccCCCCCcEEEcCCCcccc----cCCccccCCCCCCEEecccCcCcccCCcccccCCcccccCCccccCCCCCCEEecc
Q 041479 63 YIGNLTFLRLINLQQNNFSS----NIPHEIGRLFRLRHIIFNSNALQGQIPDSRLILNKLEGNIPSELGSLLKFKGLGLA 138 (771)
Q Consensus 63 ~~~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~l~~n~l~~~~p~~~~~l~~L~~L~Ls 138 (771)
.+.....++.|+||+|.|.. .+...+.+.++|+.-++|.-- +|.+.+.+...-+ .+...+...++|++||||
T Consensus 25 ~~~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~f-tGR~~~Ei~e~L~---~l~~aL~~~~~L~~ldLS 100 (382)
T KOG1909|consen 25 ELEPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMF-TGRLKDEIPEALK---MLSKALLGCPKLQKLDLS 100 (382)
T ss_pred HhcccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhh-cCCcHHHHHHHHH---HHHHHHhcCCceeEeecc
Confidence 44556667777777777753 244556666777777766432 3221111000000 112234445577777777
Q ss_pred cccCcCC-CCccceeeecccccccccCccccCCCCCCEEecccCcCcccCChhh-h------------hCCCCCcEEEee
Q 041479 139 NNYFTGP-IPHLNMFQVSVYSLTGSIPIQLLNITSMEYFHVSENQLVGELPPHI-G------------FTLPNVRILLLA 204 (771)
Q Consensus 139 ~N~l~~~-lp~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~-~------------~~l~~L~~L~L~ 204 (771)
+|.|-.. ++- +-.-+..++.|++|.|.+|.+. ..-... + ..-+.|+++...
T Consensus 101 DNA~G~~g~~~--------------l~~ll~s~~~L~eL~L~N~Glg-~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~ 165 (382)
T KOG1909|consen 101 DNAFGPKGIRG--------------LEELLSSCTDLEELYLNNCGLG-PEAGGRLGRALFELAVNKKAASKPKLRVFICG 165 (382)
T ss_pred ccccCccchHH--------------HHHHHHhccCHHHHhhhcCCCC-hhHHHHHHHHHHHHHHHhccCCCcceEEEEee
Confidence 7776411 110 1112345677888888888775 211111 0 023456666666
Q ss_pred cCccccc----CCccccCCCCCCEEEccccccCCCCC-cCcccccCCCCCcEEEccCccccccCChhhhhcccccceeec
Q 041479 205 GNQFFGN----IPHSISNASKLEWLDFANNSLTGLIP-EDLDSLVNCTYLEVVSLSVNSLSGTLPNSLANFSSHLRYLYM 279 (771)
Q Consensus 205 ~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L 279 (771)
+|++... +...|...+.|+.+.++.|.|...-- -.+..+..+++|++|||..|-++..-..
T Consensus 166 rNrlen~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~-------------- 231 (382)
T KOG1909|consen 166 RNRLENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSV-------------- 231 (382)
T ss_pred ccccccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHH--------------
Confidence 6666521 11234455566666666665541100 0112335556666666666655421110
Q ss_pred ccCcCcccCcccccccCCcceEecCCccceeccCccc-----cCCCCCCEEEccCCccccc----CCccccccccccccc
Q 041479 280 SANPISGSIPTEIGNLKNLIIIAIEKFILIRNIPISV-----GYLLKLQVLSLFENNISRE----IPSSLGNFTFLTELN 350 (771)
Q Consensus 280 s~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~-----~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~ 350 (771)
.+...+..+++|+.|+++++.+...-..+| ...++|++|.|.+|.++.. +...+...+.|..|+
T Consensus 232 -------~LakaL~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLn 304 (382)
T KOG1909|consen 232 -------ALAKALSSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLN 304 (382)
T ss_pred -------HHHHHhcccchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhc
Confidence 111223333444444444444432222221 2367888999999988742 223445578999999
Q ss_pred ccCccce
Q 041479 351 LCGNSIR 357 (771)
Q Consensus 351 Ls~N~l~ 357 (771)
|++|++.
T Consensus 305 LngN~l~ 311 (382)
T KOG1909|consen 305 LNGNRLG 311 (382)
T ss_pred CCccccc
Confidence 9999993
No 483
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.74 E-value=6.1e-08 Score=90.70 Aligned_cols=129 Identities=22% Similarity=0.215 Sum_probs=88.9
Q ss_pred ccccccceEEEEEecCCCeEEEEEEeeccc--------hhhHHHHHHHHHHHhccCCCC--ceeEEEEeecCCCCCceeE
Q 041479 529 YESLVKATVYKGILDLDQTFIAVKVLFLHQ--------RGALKSFMAECQALRNIRHRN--LVKIITACSTSDFQGNYFR 598 (771)
Q Consensus 529 l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--------~~~~~~~~~E~~~l~~l~H~n--Iv~l~~~~~~~~~~~~~~~ 598 (771)
..+|+.+.+|.+.+... .+++|.=..+. .--.++..+|++++.+++--. +-.++++ +.+ ..
T Consensus 4 i~~GAEa~i~~~~~~g~--~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dv--D~~-----~~ 74 (204)
T COG3642 4 IKQGAEAIIYLTDFLGL--PAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDV--DPD-----NG 74 (204)
T ss_pred hhCCcceeEEeeeccCc--ceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEE--cCC-----CC
Confidence 45788888999877432 45555432211 112357788999999986433 3334443 333 34
Q ss_pred EEEEEeccCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccC
Q 041479 599 ALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIP 674 (771)
Q Consensus 599 ~lv~e~~~~g~L~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~ 674 (771)
.|+|||.+|..|.+....- +..++..+-.-+.-||.. +|+|+|+.++||++.... +.++|||++.+-.
T Consensus 75 ~I~me~I~G~~lkd~l~~~----~~~~~r~vG~~vg~lH~~---givHGDLTtsNiIl~~~~-i~~IDfGLg~~s~ 142 (204)
T COG3642 75 LIVMEYIEGELLKDALEEA----RPDLLREVGRLVGKLHKA---GIVHGDLTTSNIILSGGR-IYFIDFGLGEFSD 142 (204)
T ss_pred EEEEEEeCChhHHHHHHhc----chHHHHHHHHHHHHHHhc---CeecCCCccceEEEeCCc-EEEEECCcccccc
Confidence 7999999987776542111 356667777778889986 999999999999998664 9999999998543
No 484
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.73 E-value=8e-08 Score=93.00 Aligned_cols=123 Identities=22% Similarity=0.209 Sum_probs=80.0
Q ss_pred EEEEEecCCCeEEEEEEeeccc--------------h------------hhHHHHHHHHHHHhccCCC--CceeEEEEee
Q 041479 537 VYKGILDLDQTFIAVKVLFLHQ--------------R------------GALKSFMAECQALRNIRHR--NLVKIITACS 588 (771)
Q Consensus 537 Vy~~~~~~~~~~vAvK~~~~~~--------------~------------~~~~~~~~E~~~l~~l~H~--nIv~l~~~~~ 588 (771)
||.|...++. .||||+.+... . .......+|.+.|.++..- ++-+.+++
T Consensus 2 Vy~~~~~~~~-~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~-- 78 (188)
T PF01163_consen 2 VYHAIDPDGE-EVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDY-- 78 (188)
T ss_dssp EEEEEECTTE-EEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEE--
T ss_pred EEEEECCCCC-EEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEE--
Confidence 8999887665 99999996421 0 0124567899999999755 45566554
Q ss_pred cCCCCCceeEEEEEEecc--CCCCCCCcc-cCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEe
Q 041479 589 TSDFQGNYFRALVYEFMH--HGSLESCPR-ILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMG 665 (771)
Q Consensus 589 ~~~~~~~~~~~lv~e~~~--~g~L~~~~~-~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~ 665 (771)
..+ ++||||++ |..+..... .++..+...++.++...+..+++. .+|+|+|+.+.||+++++ .+.++
T Consensus 79 ~~~-------~ivME~I~~~G~~~~~l~~~~~~~~~~~~~~~~il~~~~~~~~~--~givHGDLs~~NIlv~~~-~~~iI 148 (188)
T PF01163_consen 79 NRN-------VIVMEYIGEDGVPLPRLKDVDLSPEEPKELLEEILEEIIKMLHK--AGIVHGDLSEYNILVDDG-KVYII 148 (188)
T ss_dssp ETT-------EEEEE--EETTEEGGCHHHCGGGGSTHHHHHHHHHHHHHHHHHC--TTEEESS-STTSEEEETT-CEEE-
T ss_pred eCC-------EEEEEecCCCccchhhHHhccccchhHHHHHHHHHHHHHHHHHh--cCceecCCChhhEEeecc-eEEEE
Confidence 222 79999998 544544311 122345667778888867765432 499999999999999977 89999
Q ss_pred cccCccc
Q 041479 666 DFGLTRF 672 (771)
Q Consensus 666 DfGla~~ 672 (771)
|||-+..
T Consensus 149 Df~qav~ 155 (188)
T PF01163_consen 149 DFGQAVD 155 (188)
T ss_dssp -GTTEEE
T ss_pred ecCccee
Confidence 9997753
No 485
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.65 E-value=1.6e-07 Score=100.10 Aligned_cols=169 Identities=19% Similarity=0.222 Sum_probs=121.3
Q ss_pred cccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEeccC-CCC
Q 041479 532 LVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHH-GSL 610 (771)
Q Consensus 532 ~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~~~~-g~L 610 (771)
....+.||+....+|..|+.|++...+.........-++..+++.|+|||++.+++.+..+. .-.+++||+|.++ ++|
T Consensus 287 ~~~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~-D~SlvlvYDYyP~s~TL 365 (655)
T KOG3741|consen 287 LFSITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFG-DLSLVLVYDYYPSSPTL 365 (655)
T ss_pred cccceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccC-cceEEEEEecCCCCchH
Confidence 46688999999999999999999443333333344567889999999999999998755433 3357999999985 344
Q ss_pred CCC------------------cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccc
Q 041479 611 ESC------------------PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRF 672 (771)
Q Consensus 611 ~~~------------------~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~ 672 (771)
.+. ....++...+.++.|+..||.++|+. |..-+-+.+.+|+++.+.+++|+..|....
T Consensus 366 ~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss---GLAck~L~~~kIlv~G~~RIriS~C~i~Dv 442 (655)
T KOG3741|consen 366 YDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS---GLACKTLDLKKILVTGKMRIRISGCGIMDV 442 (655)
T ss_pred HHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc---CceeecccHhHeEeeCcceEEEecccceee
Confidence 222 22456788999999999999999996 888899999999999988999988887654
Q ss_pred cCcccCCcccccccccccccccchhHHHHHHHHHhCCC
Q 041479 673 IPEVMSSNQCSSVGLKGTVGYATPEYGILLLEIFTGKR 710 (771)
Q Consensus 673 ~~~~~~~~~~~~~~~~gt~~y~aPE~Gv~l~el~tg~~ 710 (771)
+............. --.. -+|.+++.+.||..
T Consensus 443 l~~d~~~~le~~Qq--~D~~----~lG~ll~aLAt~~~ 474 (655)
T KOG3741|consen 443 LQEDPTEPLESQQQ--NDLR----DLGLLLLALATGTE 474 (655)
T ss_pred ecCCCCcchhHHhh--hhHH----HHHHHHHHHhhccc
Confidence 43322000000000 0000 17999999999943
No 486
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.61 E-value=2.4e-08 Score=118.18 Aligned_cols=203 Identities=22% Similarity=0.296 Sum_probs=101.2
Q ss_pred CCCcEEEcCCCcccccCCccccCCCCCCEEecccCc--CcccCCcccccCCcccccCCc-cccCCCCCCEEecccccCcC
Q 041479 68 TFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNA--LQGQIPDSRLILNKLEGNIPS-ELGSLLKFKGLGLANNYFTG 144 (771)
Q Consensus 68 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~--l~~~~p~~~l~~n~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~ 144 (771)
...++..+.+|++.. ++..... ++|++|-+..|. +. .++. .|..++.|+.|||++|.=-
T Consensus 523 ~~~rr~s~~~~~~~~-~~~~~~~-~~L~tLll~~n~~~l~---------------~is~~ff~~m~~LrVLDLs~~~~l- 584 (889)
T KOG4658|consen 523 NSVRRMSLMNNKIEH-IAGSSEN-PKLRTLLLQRNSDWLL---------------EISGEFFRSLPLLRVLDLSGNSSL- 584 (889)
T ss_pred hheeEEEEeccchhh-ccCCCCC-CccceEEEeecchhhh---------------hcCHHHHhhCcceEEEECCCCCcc-
Confidence 555666666666552 3333322 256666666664 11 2222 2455666666666654210
Q ss_pred CCCccceeeecccccccccCccccCCCCCCEEecccCcCcccCChhhhhCCCCCcEEEeecCcccccCCccccCCCCCCE
Q 041479 145 PIPHLNMFQVSVYSLTGSIPIQLLNITSMEYFHVSENQLVGELPPHIGFTLPNVRILLLAGNQFFGNIPHSISNASKLEW 224 (771)
Q Consensus 145 ~lp~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 224 (771)
+.+|..+++|-+|++|++++..++ .+|..+. +|..|.+|++..+.-...+|+....+++|++
T Consensus 585 ----------------~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l~-~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~ 646 (889)
T KOG4658|consen 585 ----------------SKLPSSIGELVHLRYLDLSDTGIS-HLPSGLG-NLKKLIYLNLEVTGRLESIPGILLELQSLRV 646 (889)
T ss_pred ----------------CcCChHHhhhhhhhcccccCCCcc-ccchHHH-HHHhhheeccccccccccccchhhhcccccE
Confidence 145666666666666666666666 6666665 6666777777666655455666666677777
Q ss_pred EEccccccCCCCCcCcccccCCCCCcEEEccCccccccCC--hhhhhcccccceeecccCcCcccCcccccccCCcceEe
Q 041479 225 LDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSLSGTLP--NSLANFSSHLRYLYMSANPISGSIPTEIGNLKNLIIIA 302 (771)
Q Consensus 225 L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~p--~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 302 (771)
|.+..-..... ......+.++.+|+.+........ .+- .....+.+..+.+.+.++... ..+..+..+.+|+.|.
T Consensus 647 L~l~~s~~~~~-~~~l~el~~Le~L~~ls~~~~s~~-~~e~l~~~~~L~~~~~~l~~~~~~~~-~~~~~~~~l~~L~~L~ 723 (889)
T KOG4658|consen 647 LRLPRSALSND-KLLLKELENLEHLENLSITISSVL-LLEDLLGMTRLRSLLQSLSIEGCSKR-TLISSLGSLGNLEELS 723 (889)
T ss_pred EEeeccccccc-hhhHHhhhcccchhhheeecchhH-hHhhhhhhHHHHHHhHhhhhcccccc-eeecccccccCcceEE
Confidence 66655432110 111222344444544444333220 000 111111112223333332222 3445566666677766
Q ss_pred cCCccce
Q 041479 303 IEKFILI 309 (771)
Q Consensus 303 l~~n~l~ 309 (771)
+.++.+.
T Consensus 724 i~~~~~~ 730 (889)
T KOG4658|consen 724 ILDCGIS 730 (889)
T ss_pred EEcCCCc
Confidence 6665553
No 487
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.57 E-value=3.6e-08 Score=116.72 Aligned_cols=88 Identities=27% Similarity=0.403 Sum_probs=72.9
Q ss_pred cCCCCcEEEEEcCCCC--CcccCCccccCCCCCcEEEcCCCcccccCCccccCCCCCCEEecccCcCcccCCcccccCCc
Q 041479 40 SLKYQRVILLNLSGQN--LTGTASPYIGNLTFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNALQGQIPDSRLILNK 117 (771)
Q Consensus 40 ~~~~~~l~~L~Ls~n~--l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~l~~n~ 117 (771)
....+.+++|-+..|. +..+.++.|..++.|+.||||+|.=-+.+|..++.|-+|++|+|++..++
T Consensus 541 ~~~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~------------ 608 (889)
T KOG4658|consen 541 SSENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS------------ 608 (889)
T ss_pred CCCCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc------------
Confidence 3333568888888886 66566667889999999999998654579999999999999999999976
Q ss_pred ccccCCccccCCCCCCEEecccccC
Q 041479 118 LEGNIPSELGSLLKFKGLGLANNYF 142 (771)
Q Consensus 118 l~~~~p~~~~~l~~L~~L~Ls~N~l 142 (771)
.+|..+.+|.+|.+|++..+.-
T Consensus 609 ---~LP~~l~~Lk~L~~Lnl~~~~~ 630 (889)
T KOG4658|consen 609 ---HLPSGLGNLKKLIYLNLEVTGR 630 (889)
T ss_pred ---ccchHHHHHHhhheeccccccc
Confidence 7889999999999999987754
No 488
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.56 E-value=8.5e-07 Score=91.22 Aligned_cols=131 Identities=15% Similarity=0.025 Sum_probs=89.6
Q ss_pred EEEEEecCCCeEEEEEEeeccchh-hH----------HHHHHHHHHHhccC--CCCceeEEEEeecCCCCCceeEEEEEE
Q 041479 537 VYKGILDLDQTFIAVKVLFLHQRG-AL----------KSFMAECQALRNIR--HRNLVKIITACSTSDFQGNYFRALVYE 603 (771)
Q Consensus 537 Vy~~~~~~~~~~vAvK~~~~~~~~-~~----------~~~~~E~~~l~~l~--H~nIv~l~~~~~~~~~~~~~~~~lv~e 603 (771)
|++..+ +|+.|.||+....... .. ..+.+|...+.++. .-.+.+.+++............++|||
T Consensus 38 vvr~~~--~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVte 115 (268)
T PRK15123 38 TLRFEL--AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIITE 115 (268)
T ss_pred EEEEEE--CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEEe
Confidence 556654 4558999977433211 11 24788999988884 333444555553321111124689999
Q ss_pred eccCC-CCCCCc-----ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCC-------CCceEEecccCc
Q 041479 604 FMHHG-SLESCP-----RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN-------DMTAHMGDFGLT 670 (771)
Q Consensus 604 ~~~~g-~L~~~~-----~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~-------~~~~kl~DfGla 670 (771)
++++. +|.++. ...+...+..++.+++..+.-||.. ||+|+|++++|||++. ++.+.++||+.+
T Consensus 116 ~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~---Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LIDl~r~ 192 (268)
T PRK15123 116 DLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAA---GINHRDCYICHFLLHLPFPGREEDLKLSVIDLHRA 192 (268)
T ss_pred eCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHC---cCccCCCChhhEEEeccccCCCCCceEEEEECCcc
Confidence 99875 665552 2234456778999999999999996 9999999999999975 468999999988
Q ss_pred cc
Q 041479 671 RF 672 (771)
Q Consensus 671 ~~ 672 (771)
+.
T Consensus 193 ~~ 194 (268)
T PRK15123 193 QI 194 (268)
T ss_pred cc
Confidence 53
No 489
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.56 E-value=4.2e-07 Score=84.65 Aligned_cols=134 Identities=21% Similarity=0.207 Sum_probs=88.4
Q ss_pred ccccccceEEEEEecCCCeEEEEEEeeccc--------hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEE
Q 041479 529 YESLVKATVYKGILDLDQTFIAVKVLFLHQ--------RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRAL 600 (771)
Q Consensus 529 l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--------~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~l 600 (771)
+-+|+.|.|+++.+. |+...||.=.... .-..++..+|++.+.+++--.|.--.-++.+.. .-.|
T Consensus 15 ikQGAEArv~~~~~~--Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~-----~~~i 87 (229)
T KOG3087|consen 15 IKQGAEARVPRGSFS--GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTY-----GGQI 87 (229)
T ss_pred eeccceeeEeeeccC--CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecC-----CCeE
Confidence 457888899999876 4345555432221 223467889999999986333322222222222 2269
Q ss_pred EEEeccCC-CCCCC-----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCC---ceEEecccCcc
Q 041479 601 VYEFMHHG-SLESC-----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDM---TAHMGDFGLTR 671 (771)
Q Consensus 601 v~e~~~~g-~L~~~-----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~---~~kl~DfGla~ 671 (771)
+|||.+|- ++.++ ............+..+-+.+.-||.. +|+|+||..+||++..++ .+.++|||++.
T Consensus 88 ~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~n---diiHGDLTTSNill~~~~~~~~~~lIdfgls~ 164 (229)
T KOG3087|consen 88 YMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDN---DIIHGDLTTSNILLRSDGNQITPILIDFGLSS 164 (229)
T ss_pred EEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhC---CeecccccccceEEecCCCcCceEEEeecchh
Confidence 99999763 34433 11122222367788888999999986 899999999999997554 45899999986
Q ss_pred c
Q 041479 672 F 672 (771)
Q Consensus 672 ~ 672 (771)
.
T Consensus 165 ~ 165 (229)
T KOG3087|consen 165 V 165 (229)
T ss_pred c
Confidence 4
No 490
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.50 E-value=3.1e-09 Score=116.36 Aligned_cols=108 Identities=30% Similarity=0.424 Sum_probs=50.8
Q ss_pred ccCCCCCCEEecccCcCcccCChhhhhCCCCCcEEEeecCcccccCCc-cccCCCCCCEEEccccccCCCCCcCcccccC
Q 041479 167 LLNITSMEYFHVSENQLVGELPPHIGFTLPNVRILLLAGNQFFGNIPH-SISNASKLEWLDFANNSLTGLIPEDLDSLVN 245 (771)
Q Consensus 167 ~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 245 (771)
+.-++.|+.|+||+|+++ .+. .+. .++.|++|||++|++.. +|. ...++ .|..|.|++|.++.+ .++.+
T Consensus 183 Lqll~ale~LnLshNk~~-~v~-~Lr-~l~~LkhLDlsyN~L~~-vp~l~~~gc-~L~~L~lrnN~l~tL-----~gie~ 252 (1096)
T KOG1859|consen 183 LQLLPALESLNLSHNKFT-KVD-NLR-RLPKLKHLDLSYNCLRH-VPQLSMVGC-KLQLLNLRNNALTTL-----RGIEN 252 (1096)
T ss_pred HHHHHHhhhhccchhhhh-hhH-HHH-hcccccccccccchhcc-ccccchhhh-hheeeeecccHHHhh-----hhHHh
Confidence 334455555555555555 332 222 45555555555555552 222 12222 255555555555532 22345
Q ss_pred CCCCcEEEccCccccccCC-hhhhhcccccceeecccCcCc
Q 041479 246 CTYLEVVSLSVNSLSGTLP-NSLANFSSHLRYLYMSANPIS 285 (771)
Q Consensus 246 l~~L~~L~Ls~N~l~~~~p-~~~~~l~~~L~~L~Ls~N~l~ 285 (771)
|.+|+.||+++|-|.+.-. ..++.+. .|+.|+|.+|.+.
T Consensus 253 LksL~~LDlsyNll~~hseL~pLwsLs-~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 253 LKSLYGLDLSYNLLSEHSELEPLWSLS-SLIVLWLEGNPLC 292 (1096)
T ss_pred hhhhhccchhHhhhhcchhhhHHHHHH-HHHHHhhcCCccc
Confidence 5555555555555543211 1122332 4556666666554
No 491
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.48 E-value=2.7e-09 Score=116.76 Aligned_cols=129 Identities=28% Similarity=0.257 Sum_probs=79.9
Q ss_pred cceEecCCccceeccCccccCCCCCCEEEccCCcccccCCcccccccccccccccCccceecCCcccccccceeeecccC
Q 041479 298 LIIIAIEKFILIRNIPISVGYLLKLQVLSLFENNISREIPSSLGNFTFLTELNLCGNSIRGSVPSALGSCHQLWLDLSHN 377 (771)
Q Consensus 298 L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~L~Ls~N 377 (771)
|...+.++|.+. ....++.-++.|+.|+|++|+++... .+..++.|++|||+.|.++.+.--....+....|.+++|
T Consensus 166 L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v~--~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc~L~~L~lrnN 242 (1096)
T KOG1859|consen 166 LATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKVD--NLRRLPKLKHLDLSYNCLRHVPQLSMVGCKLQLLNLRNN 242 (1096)
T ss_pred HhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhhH--HHHhcccccccccccchhccccccchhhhhheeeeeccc
Confidence 333344444442 23344555667777777777776443 667777788888888877733322333444226788888
Q ss_pred cccCCCCcCCCCCCCCCeEECCCCcccccCCcchhhhhcccccccEEECcCCCCCCC
Q 041479 378 HLTGPIPLAVGNPKSIPHLDLSKNELSGEIPSSLAWIFGYISIFAKLNLSYNNLDGD 434 (771)
Q Consensus 378 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~l~~L~~L~Ls~N~l~~~ 434 (771)
.++... .+.++++|+.|||++|-|.+--.-.+-| .+..|+.|+|.+|++.+.
T Consensus 243 ~l~tL~--gie~LksL~~LDlsyNll~~hseL~pLw---sLs~L~~L~LeGNPl~c~ 294 (1096)
T KOG1859|consen 243 ALTTLR--GIENLKSLYGLDLSYNLLSEHSELEPLW---SLSSLIVLWLEGNPLCCA 294 (1096)
T ss_pred HHHhhh--hHHhhhhhhccchhHhhhhcchhhhHHH---HHHHHHHHhhcCCccccC
Confidence 877432 3567888888888888887432222222 556778888899888653
No 492
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.47 E-value=5.2e-08 Score=106.38 Aligned_cols=144 Identities=25% Similarity=0.228 Sum_probs=110.6
Q ss_pred ccccccccccccccceEEEEEec-CCCeEEEEEEeeccchhhH--HHHHHHHHHHhccC-CCCceeEEEEeecCCCCCce
Q 041479 521 KDLLLNVSYESLVKATVYKGILD-LDQTFIAVKVLFLHQRGAL--KSFMAECQALRNIR-HRNLVKIITACSTSDFQGNY 596 (771)
Q Consensus 521 ~~~~~~~~l~~~~~~~Vy~~~~~-~~~~~vAvK~~~~~~~~~~--~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~~~ 596 (771)
.++.....++++.++.||+...+ .++..||+|.+........ ..-..|+.+...+. |.++++.+..|..-.
T Consensus 265 ~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r----- 339 (524)
T KOG0601|consen 265 TDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLR----- 339 (524)
T ss_pred CCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccc-----
Confidence 34455667888888888887765 6777999998855433222 22345666666664 888999877765544
Q ss_pred eEEEEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCC-CceEEecccCccc
Q 041479 597 FRALVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDND-MTAHMGDFGLTRF 672 (771)
Q Consensus 597 ~~~lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~-~~~kl~DfGla~~ 672 (771)
..|+=-|||++++.... ...+++..++++..|++.|+.++|+ +.++|+|+||+||++..+ +..++.|||++..
T Consensus 340 ~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s---~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~ 416 (524)
T KOG0601|consen 340 QGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHS---KLFVHLDVKPSNILISNDGFFSKLGDFGCWTR 416 (524)
T ss_pred cccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccc---hhhhcccccccceeeccchhhhhccccccccc
Confidence 45788999999987654 3457788899999999999999997 489999999999999876 8899999999864
No 493
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.39 E-value=1.9e-08 Score=88.44 Aligned_cols=108 Identities=25% Similarity=0.303 Sum_probs=54.5
Q ss_pred CCEEEccccccCCCCCcCcccccCCCCCcEEEccCccccccCChhhhhcccccceeecccCcCcccCcccccccCCcceE
Q 041479 222 LEWLDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSLSGTLPNSLANFSSHLRYLYMSANPISGSIPTEIGNLKNLIII 301 (771)
Q Consensus 222 L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 301 (771)
+..+||+.++|. .+++....+.....|...+|++|.+. .+|+.|....+.++.|+|++|+|+ .+|.++..++.|+.|
T Consensus 29 ~h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~l 105 (177)
T KOG4579|consen 29 LHFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSL 105 (177)
T ss_pred hhhcccccchhh-HHHHHHHHHhCCceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhc
Confidence 345555555553 23444433344455555666666665 556555544334666666666666 445555555555555
Q ss_pred ecCCccceeccCccccCCCCCCEEEccCCccc
Q 041479 302 AIEKFILIRNIPISVGYLLKLQVLSLFENNIS 333 (771)
Q Consensus 302 ~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 333 (771)
+++.|.+. ..|..+..+.+|-.|+..+|.+.
T Consensus 106 Nl~~N~l~-~~p~vi~~L~~l~~Lds~~na~~ 136 (177)
T KOG4579|consen 106 NLRFNPLN-AEPRVIAPLIKLDMLDSPENARA 136 (177)
T ss_pred ccccCccc-cchHHHHHHHhHHHhcCCCCccc
Confidence 55444442 22333333444444444444443
No 494
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.33 E-value=1.3e-08 Score=89.39 Aligned_cols=118 Identities=19% Similarity=0.306 Sum_probs=87.0
Q ss_pred eecCCCCcEEEEEcCCCCCcccCCc---cccCCCCCcEEEcCCCcccccCCccccC-CCCCCEEecccCcCcccCCcccc
Q 041479 38 TCSLKYQRVILLNLSGQNLTGTASP---YIGNLTFLRLINLQQNNFSSNIPHEIGR-LFRLRHIIFNSNALQGQIPDSRL 113 (771)
Q Consensus 38 ~c~~~~~~l~~L~Ls~n~l~~~~~~---~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~Ls~N~l~~~~p~~~l 113 (771)
+|.+. .-+-.+||+++.|- .++. .+....+|+..+|++|.+.. .|+.|.. .+-+++|+|++|+|+
T Consensus 22 rceda-kE~h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk~-fp~kft~kf~t~t~lNl~~neis-------- 90 (177)
T KOG4579|consen 22 RCEDA-KELHFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFKK-FPKKFTIKFPTATTLNLANNEIS-------- 90 (177)
T ss_pred hhHHH-HHhhhcccccchhh-HHHHHHHHHhCCceEEEEecccchhhh-CCHHHhhccchhhhhhcchhhhh--------
Confidence 45543 45567888888775 3333 34566778888999999985 5655544 457888899999876
Q ss_pred cCCcccccCCccccCCCCCCEEecccccCcCCCCccceeeecccccccccCccccCCCCCCEEecccCcCcccCChhhh
Q 041479 114 ILNKLEGNIPSELGSLLKFKGLGLANNYFTGPIPHLNMFQVSVYSLTGSIPIQLLNITSMEYFHVSENQLVGELPPHIG 192 (771)
Q Consensus 114 ~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~ 192 (771)
.+|.++..++.|+.|+++.|.|. ..|..+..|.++.+|+..+|.+. ++|-.++
T Consensus 91 -------dvPeE~Aam~aLr~lNl~~N~l~------------------~~p~vi~~L~~l~~Lds~~na~~-eid~dl~ 143 (177)
T KOG4579|consen 91 -------DVPEELAAMPALRSLNLRFNPLN------------------AEPRVIAPLIKLDMLDSPENARA-EIDVDLF 143 (177)
T ss_pred -------hchHHHhhhHHhhhcccccCccc------------------cchHHHHHHHhHHHhcCCCCccc-cCcHHHh
Confidence 67888888888888888888876 56666667788888888888877 7776654
No 495
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.33 E-value=3.9e-06 Score=83.52 Aligned_cols=129 Identities=21% Similarity=0.142 Sum_probs=90.2
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeeccch----------------------hhHHHHHHHHHHHhccCCC--Ccee
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLHQR----------------------GALKSFMAECQALRNIRHR--NLVK 582 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~----------------------~~~~~~~~E~~~l~~l~H~--nIv~ 582 (771)
-.+|.|..+.||.|..+.+. ++|||.=+.+.. -.+....+|.++|.++.-. .|-+
T Consensus 97 ~~IGvGKEsdVY~~~~~~g~-~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~VP~ 175 (304)
T COG0478 97 TKIGVGKESDVYVAIDPKGR-KVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVKVPK 175 (304)
T ss_pred cccccCccceEEEEECCCCC-EEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCCCCC
Confidence 45789999999999998776 999997654321 1124567899999998754 6666
Q ss_pred EEEEeecCCCCCceeEEEEEEeccCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCce
Q 041479 583 IITACSTSDFQGNYFRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTA 662 (771)
Q Consensus 583 l~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~ 662 (771)
-+++- ..++||||.+|-.|.... ++....-.+...|.+-+.-.-. .||||+|+.+=||+++++|.+
T Consensus 176 P~~~n---------RHaVvMe~ieG~eL~~~r--~~~en~~~il~~il~~~~~~~~---~GiVHGDlSefNIlV~~dg~~ 241 (304)
T COG0478 176 PIAWN---------RHAVVMEYIEGVELYRLR--LDVENPDEILDKILEEVRKAYR---RGIVHGDLSEFNILVTEDGDI 241 (304)
T ss_pred ccccc---------cceeeeehcccceeeccc--CcccCHHHHHHHHHHHHHHHHH---cCccccCCchheEEEecCCCE
Confidence 65541 458999999997776542 1223333333344333332223 389999999999999999999
Q ss_pred EEecccCc
Q 041479 663 HMGDFGLT 670 (771)
Q Consensus 663 kl~DfGla 670 (771)
.++||-=+
T Consensus 242 ~vIDwPQ~ 249 (304)
T COG0478 242 VVIDWPQA 249 (304)
T ss_pred EEEeCccc
Confidence 99999643
No 496
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.27 E-value=6e-06 Score=82.07 Aligned_cols=107 Identities=24% Similarity=0.250 Sum_probs=81.2
Q ss_pred HHHHHHHHHHHhccC--CCCceeEEEEeecCCCCCceeEEEEEEeccCC-CCCCCcc---cCCHHHHHHHHHHHHHHHHH
Q 041479 562 LKSFMAECQALRNIR--HRNLVKIITACSTSDFQGNYFRALVYEFMHHG-SLESCPR---ILSFLRRLNIAIDVASALEY 635 (771)
Q Consensus 562 ~~~~~~E~~~l~~l~--H~nIv~l~~~~~~~~~~~~~~~~lv~e~~~~g-~L~~~~~---~l~~~~~~~i~~~ia~gL~~ 635 (771)
..++.+|...+..++ .-.+.+.+++......-. ...++|+|++++. +|.++.. ..+......++.+++..+.-
T Consensus 55 ~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~-~~s~lite~l~~~~~L~~~~~~~~~~~~~~~~~ll~~l~~~i~~ 133 (206)
T PF06293_consen 55 RSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGG-YRSYLITEALPGAQDLRDLLQQWEQLDPSQRRELLRALARLIAK 133 (206)
T ss_pred chHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCc-eeEEEEEEeCCCcccHHHHHHhhcccchhhHHHHHHHHHHHHHH
Confidence 346788888888775 344556666665533211 3568999999874 6766532 25566778999999999999
Q ss_pred HHhcCCCCeEecCCCCCCeeeCCCC---ceEEecccCccc
Q 041479 636 LHHHCKKPIVHCDLKPSNVLLDNDM---TAHMGDFGLTRF 672 (771)
Q Consensus 636 LH~~~~~~ivHrdlk~~NILl~~~~---~~kl~DfGla~~ 672 (771)
||.. ||+|+|+++.|||++.+. .+.++||+-++.
T Consensus 134 lH~~---gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 134 LHDA---GIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred HHHC---cCCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 9996 999999999999999876 899999998764
No 497
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.17 E-value=1.1e-05 Score=89.85 Aligned_cols=137 Identities=22% Similarity=0.224 Sum_probs=89.5
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeeccch----------------------h------------------hHHHHH
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLHQR----------------------G------------------ALKSFM 566 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~----------------------~------------------~~~~~~ 566 (771)
.+++..+-|.||+|+++++ +.||||+.+.+-. . ..-++.
T Consensus 131 ~PiAsASIaQVH~A~L~sG-~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~ 209 (517)
T COG0661 131 EPIASASIAQVHRAVLKSG-EEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYR 209 (517)
T ss_pred CchhhhhHhhheeEEecCC-CEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHH
Confidence 4567788889999999985 5999999964310 0 011456
Q ss_pred HHHHHHhccC-----CCCceeEEEEeecCCCCCceeEEEEEEeccCCCCCCC----cccCCHHHHHHHHHHHHHH-HHHH
Q 041479 567 AECQALRNIR-----HRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESC----PRILSFLRRLNIAIDVASA-LEYL 636 (771)
Q Consensus 567 ~E~~~l~~l~-----H~nIv~l~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~g-L~~L 636 (771)
+|+..+.+++ .|+ +++=.+|++-.. ...++|||++|-.+.+. ....+ +..++.-++++ +..+
T Consensus 210 ~EA~n~~~~~~nf~~~~~-v~VP~V~we~t~----~~VLtmE~i~Gi~i~d~~~l~~~g~d---~k~ia~~~~~~f~~q~ 281 (517)
T COG0661 210 REAANAERFRENFKDDPD-VYVPKVYWEYTT----RRVLTMEWIDGIKISDIAALKSAGID---RKELAELLVRAFLRQL 281 (517)
T ss_pred HHHHHHHHHHHHcCCCCC-eEeceeehhccC----CcEEEEEeeCCEecccHHHHHhcCCC---HHHHHHHHHHHHHHHH
Confidence 6777777763 343 333333332111 35899999999888766 12233 23333333322 1112
Q ss_pred HhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCc
Q 041479 637 HHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPE 675 (771)
Q Consensus 637 H~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~ 675 (771)
-. -+++|.|..|.||+++.+|+....|||+...+++
T Consensus 282 ~~---dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 282 LR---DGFFHADPHPGNILVRSDGRIVLLDFGIVGRLDP 317 (517)
T ss_pred Hh---cCccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence 12 2899999999999999999999999999887654
No 498
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.16 E-value=3.9e-07 Score=104.73 Aligned_cols=225 Identities=20% Similarity=0.169 Sum_probs=135.4
Q ss_pred cccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEe
Q 041479 528 SYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEF 604 (771)
Q Consensus 528 ~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~ 604 (771)
+...+.++.++-+.-...+...++|+..... ....+...++-.+.-..+||-+++...-+.-.. -.++|++|
T Consensus 811 p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rs-----P~~L~~~~ 885 (1205)
T KOG0606|consen 811 PSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRS-----PLPLVGHY 885 (1205)
T ss_pred cccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCC-----CcchhhHH
Confidence 4556666666666555555455555543221 112233333444444455677776544322222 45899999
Q ss_pred ccCCCCCCCc---ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcc-----
Q 041479 605 MHHGSLESCP---RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV----- 676 (771)
Q Consensus 605 ~~~g~L~~~~---~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~----- 676 (771)
..++++.... ...+..........+.++.+|||.. .+.|||++|.|++...++..+++|||........
T Consensus 886 ~~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s~---~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~~~ 962 (1205)
T KOG0606|consen 886 LNGGDLPSKLHNSGCLSAEPARSPILERVQSLESLHSS---LRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPTTD 962 (1205)
T ss_pred hccCCchhhhhcCCCcccccccchhHHHHhhhhccccc---hhhcccccccchhhcccCCcccCccccccccccccCcCC
Confidence 9998886652 2233334455566788899999984 5899999999999999999999999854322110
Q ss_pred ----------------cC----C--cccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCC
Q 041479 677 ----------------MS----S--NQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEG 719 (771)
Q Consensus 677 ----------------~~----~--~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~ 719 (771)
.. . .........||+.|.||| .|++++|.++|..||.+.....
T Consensus 963 ~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na~tpq~ 1042 (1205)
T KOG0606|consen 963 LSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNAETPQQ 1042 (1205)
T ss_pred cccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCCcchhh
Confidence 00 0 001123457899999999 5999999999999997654332
Q ss_pred ccHHHHHHhhCC-CchhhhcCccccccCcccChhchhhcCCHH
Q 041479 720 LDLHNFVKMALP-DQILQVLDPLFLVGGVQEGEETAEENIKKG 761 (771)
Q Consensus 720 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~ 761 (771)
+ +..+..+..+ ...+...++.......+-+..+|.+|-.|.
T Consensus 1043 ~-f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1043 I-FENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred h-hhccccCCCCCCCCccccChhhhhhhhhhhccCchhccCcc
Confidence 2 3334444443 222233333333333355566777776554
No 499
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.06 E-value=6.1e-07 Score=89.05 Aligned_cols=213 Identities=21% Similarity=0.267 Sum_probs=115.7
Q ss_pred ccceeeeecCCCCcEEEEEcCCCCCcccCC-ccc-cCCCCCcEEEcCCCcccc--cCCccccCCCCCCEEecccCcCccc
Q 041479 32 CQWLGVTCSLKYQRVILLNLSGQNLTGTAS-PYI-GNLTFLRLINLQQNNFSS--NIPHEIGRLFRLRHIIFNSNALQGQ 107 (771)
Q Consensus 32 c~w~~v~c~~~~~~l~~L~Ls~n~l~~~~~-~~~-~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~ 107 (771)
|+..||..- ..+..|.+.++.|..... ..| ...+.++.|||.+|+|+. .+-.-+.+|+.|++|+|+.|.+...
T Consensus 36 ~s~~~v~s~---ra~ellvln~~~id~~gd~~~~~~~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s~ 112 (418)
T KOG2982|consen 36 LSYLGVSSL---RALELLVLNGSIIDNEGDVMLFGSSVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSSD 112 (418)
T ss_pred cceeeeccc---cchhhheecCCCCCcchhHHHHHHHhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCCc
Confidence 455555321 234445555555553221 123 356778888888888874 3444467788888888888886632
Q ss_pred CCcccccCCcccccCCccccCCCCCCEEecccccCcCCCCccceeeecccccccccCccccCCCCCCEEecccCcCcc--
Q 041479 108 IPDSRLILNKLEGNIPSELGSLLKFKGLGLANNYFTGPIPHLNMFQVSVYSLTGSIPIQLLNITSMEYFHVSENQLVG-- 185 (771)
Q Consensus 108 ~p~~~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g-- 185 (771)
|. ..| ..+.+|+.|-|.+..+.- ......+.+++.+++|++|.|.+..
T Consensus 113 I~-----------~lp---~p~~nl~~lVLNgT~L~w----------------~~~~s~l~~lP~vtelHmS~N~~rq~n 162 (418)
T KOG2982|consen 113 IK-----------SLP---LPLKNLRVLVLNGTGLSW----------------TQSTSSLDDLPKVTELHMSDNSLRQLN 162 (418)
T ss_pred cc-----------cCc---ccccceEEEEEcCCCCCh----------------hhhhhhhhcchhhhhhhhccchhhhhc
Confidence 21 122 345677777777766541 0112234455555666666653320
Q ss_pred -------cCChhh--hhCCCCCcEEEeecCcccccCCccccCCCCCCEEEccccccCCCCCcCcccccCCCCCcEEEccC
Q 041479 186 -------ELPPHI--GFTLPNVRILLLAGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEVVSLSV 256 (771)
Q Consensus 186 -------~lp~~~--~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~ 256 (771)
...+.+ ...++.+..++++-|++..+. +++..+-+..|.|.....+ .+...++++..|+|+.
T Consensus 163 ~Dd~c~e~~s~~v~tlh~~~c~~~~w~~~~~l~r~F-------pnv~sv~v~e~PlK~~s~e--k~se~~p~~~~LnL~~ 233 (418)
T KOG2982|consen 163 LDDNCIEDWSTEVLTLHQLPCLEQLWLNKNKLSRIF-------PNVNSVFVCEGPLKTESSE--KGSEPFPSLSCLNLGA 233 (418)
T ss_pred cccccccccchhhhhhhcCCcHHHHHHHHHhHHhhc-------ccchheeeecCcccchhhc--ccCCCCCcchhhhhcc
Confidence 111111 012344555555556665332 5567777777776643221 2224456666778888
Q ss_pred cccccc-CChhhhhcccccceeecccCcCccc
Q 041479 257 NSLSGT-LPNSLANFSSHLRYLYMSANPISGS 287 (771)
Q Consensus 257 N~l~~~-~p~~~~~l~~~L~~L~Ls~N~l~~~ 287 (771)
|+|..- --+.+.+++ +|..|.+++|.+...
T Consensus 234 ~~idswasvD~Ln~f~-~l~dlRv~~~Pl~d~ 264 (418)
T KOG2982|consen 234 NNIDSWASVDALNGFP-QLVDLRVSENPLSDP 264 (418)
T ss_pred cccccHHHHHHHcCCc-hhheeeccCCccccc
Confidence 887521 112344454 688888888888743
No 500
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.04 E-value=6.4e-05 Score=73.56 Aligned_cols=125 Identities=19% Similarity=0.241 Sum_probs=77.0
Q ss_pred EEEEecCCCeEEEEEEeeccchhhHHH---------HHHHHHHHhccC---CCCceeEEEEeecCCCCCceeEEEEEEec
Q 041479 538 YKGILDLDQTFIAVKVLFLHQRGALKS---------FMAECQALRNIR---HRNLVKIITACSTSDFQGNYFRALVYEFM 605 (771)
Q Consensus 538 y~~~~~~~~~~vAvK~~~~~~~~~~~~---------~~~E~~~l~~l~---H~nIv~l~~~~~~~~~~~~~~~~lv~e~~ 605 (771)
|.+...-+++.+.+|..+.......+. ..+++..+.+++ -...+.++.+.......-....+++|||+
T Consensus 46 ~ValIei~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~ekk~~~~~~~~~ll~EYI 125 (229)
T PF06176_consen 46 YVALIEIDGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAAEKKIFRYTSSYVLLMEYI 125 (229)
T ss_pred EEEEEEECCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeeeeeeeccceeEEEEEEEEe
Confidence 333334445688888875543222222 233444444443 23333433333322222222457899999
Q ss_pred cCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCcc
Q 041479 606 HHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTR 671 (771)
Q Consensus 606 ~~g~L~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~ 671 (771)
+|..|.+... ++. .++..+++++.-+|.. |++|+|..|.|++++.+ .+++.||+..+
T Consensus 126 eG~~l~d~~~-i~e----~~~~ki~~~ikqlH~~---G~~HGD~hpgNFlv~~~-~i~iID~~~k~ 182 (229)
T PF06176_consen 126 EGVELNDIED-IDE----DLAEKIVEAIKQLHKH---GFYHGDPHPGNFLVSNN-GIRIIDTQGKR 182 (229)
T ss_pred cCeecccchh-cCH----HHHHHHHHHHHHHHHc---CCccCCCCcCcEEEECC-cEEEEECcccc
Confidence 9988876532 222 3445677889999986 99999999999999855 49999998765
Done!