Query 041479
Match_columns 771
No_of_seqs 664 out of 4836
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 12:35:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041479.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041479hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 6.2E-61 2.1E-65 572.6 36.4 457 1-470 11-751 (768)
2 4eco_A Uncharacterized protein 100.0 3.2E-53 1.1E-57 494.8 28.9 438 2-458 30-603 (636)
3 4ecn_A Leucine-rich repeat pro 100.0 3E-51 1E-55 486.1 29.5 428 2-455 269-840 (876)
4 3rgz_A Protein brassinosteroid 100.0 2.2E-48 7.6E-53 464.3 26.6 379 42-430 267-738 (768)
5 3t6q_A CD180 antigen; protein- 100.0 1.4E-45 4.7E-50 429.6 32.7 404 44-457 57-562 (606)
6 4asz_A BDNF/NT-3 growth factor 100.0 9.4E-47 3.2E-51 395.2 17.2 237 522-770 14-287 (299)
7 4aoj_A High affinity nerve gro 100.0 1.2E-46 3.9E-51 400.1 18.1 238 521-770 41-317 (329)
8 3t6q_A CD180 antigen; protein- 100.0 5.2E-45 1.8E-49 424.8 33.6 411 34-454 14-512 (606)
9 3j0a_A TOLL-like receptor 5; m 100.0 4.3E-45 1.5E-49 440.4 29.6 412 32-457 14-562 (844)
10 3omv_A RAF proto-oncogene seri 100.0 3.6E-46 1.2E-50 390.8 17.4 234 522-770 37-298 (307)
11 4gt4_A Tyrosine-protein kinase 100.0 4.8E-46 1.6E-50 391.6 18.2 233 526-770 31-304 (308)
12 3vq2_A TLR4, TOLL-like recepto 100.0 1.3E-44 4.4E-49 421.4 32.1 404 44-458 32-561 (606)
13 1ziw_A TOLL-like receptor 3; i 100.0 8.4E-44 2.9E-48 420.3 34.8 182 273-458 431-625 (680)
14 3fpq_A Serine/threonine-protei 100.0 5.3E-45 1.8E-49 379.1 17.4 230 527-765 32-282 (290)
15 3v47_A TOLL-like receptor 5B a 100.0 2E-43 6.7E-48 396.6 29.4 374 29-437 5-413 (455)
16 4g3f_A NF-kappa-beta-inducing 100.0 7.5E-45 2.6E-49 384.3 16.3 231 526-770 63-314 (336)
17 4fih_A Serine/threonine-protei 100.0 6.2E-45 2.1E-49 386.1 15.4 229 523-765 76-323 (346)
18 3vq2_A TLR4, TOLL-like recepto 100.0 7.4E-43 2.5E-47 406.6 32.6 382 42-439 54-565 (606)
19 4b9d_A Serine/threonine-protei 100.0 2.7E-44 9.2E-49 381.8 16.2 230 522-765 25-276 (350)
20 2z81_A CD282 antigen, TOLL-lik 100.0 5.6E-43 1.9E-47 402.7 28.3 409 31-457 3-512 (549)
21 3hmm_A TGF-beta receptor type- 100.0 1.9E-43 6.6E-48 372.6 21.0 242 525-770 7-295 (303)
22 4ase_A Vascular endothelial gr 100.0 4.1E-44 1.4E-48 383.5 16.1 240 522-771 65-346 (353)
23 4eco_A Uncharacterized protein 100.0 2.2E-43 7.7E-48 411.7 23.5 349 55-435 194-603 (636)
24 1ziw_A TOLL-like receptor 3; i 100.0 6E-42 2E-46 404.4 35.3 255 198-453 250-571 (680)
25 4aw0_A HPDK1, 3-phosphoinositi 100.0 9.7E-44 3.3E-48 371.3 17.0 230 522-764 33-283 (311)
26 4fie_A Serine/threonine-protei 100.0 6.3E-44 2.2E-48 387.6 16.1 231 521-765 151-400 (423)
27 1ogq_A PGIP-2, polygalacturona 100.0 5.3E-43 1.8E-47 372.5 22.3 293 1-358 5-306 (313)
28 2z63_A TOLL-like receptor 4, v 100.0 2.6E-42 9E-47 398.9 29.2 400 44-457 28-533 (570)
29 3j0a_A TOLL-like receptor 5; m 100.0 2.5E-42 8.7E-47 416.2 29.0 383 43-439 47-567 (844)
30 3hyh_A Carbon catabolite-derep 100.0 5.4E-43 1.8E-47 360.8 18.5 226 523-765 15-262 (275)
31 2z63_A TOLL-like receptor 4, v 100.0 1.3E-41 4.5E-46 393.1 31.3 388 42-439 50-538 (570)
32 4ecn_A Leucine-rich repeat pro 100.0 3.9E-42 1.3E-46 408.0 24.1 345 60-437 440-845 (876)
33 2z7x_B TOLL-like receptor 1, v 100.0 1.1E-40 3.8E-45 380.8 30.4 381 44-457 21-483 (520)
34 4g8a_A TOLL-like receptor 4; l 100.0 2.9E-40 1E-44 386.5 33.0 417 20-457 11-582 (635)
35 3ubd_A Ribosomal protein S6 ki 100.0 3.1E-42 1.1E-46 360.0 12.9 229 522-765 25-281 (304)
36 4g31_A Eukaryotic translation 100.0 1.9E-41 6.5E-46 355.6 15.2 235 524-765 8-279 (299)
37 2z7x_B TOLL-like receptor 1, v 100.0 1.1E-40 3.6E-45 381.0 22.4 372 41-439 42-488 (520)
38 3v47_A TOLL-like receptor 5B a 100.0 6.6E-40 2.2E-44 368.0 28.3 371 48-458 14-411 (455)
39 2z81_A CD282 antigen, TOLL-lik 100.0 2.6E-40 8.9E-45 380.4 22.8 378 42-437 48-515 (549)
40 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 4E-39 1.4E-43 371.3 31.7 153 47-220 34-195 (562)
41 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 1.6E-39 5.5E-44 374.6 23.6 384 44-439 52-517 (562)
42 2id5_A Lingo-1, leucine rich r 100.0 3.2E-39 1.1E-43 364.6 25.1 342 49-457 16-358 (477)
43 4b99_A Mitogen-activated prote 100.0 1E-39 3.5E-44 355.5 17.6 238 523-765 56-344 (398)
44 3oja_B Anopheles plasmodium-re 100.0 1.8E-38 6.2E-43 368.1 23.1 376 18-460 5-385 (597)
45 3o6n_A APL1; leucine-rich repe 100.0 2.5E-38 8.4E-43 347.7 21.5 373 22-458 3-377 (390)
46 3v5w_A G-protein coupled recep 100.0 2E-38 6.8E-43 359.4 19.2 230 519-764 187-448 (689)
47 4g8a_A TOLL-like receptor 4; l 100.0 2.6E-37 8.8E-42 361.5 29.2 384 43-439 75-587 (635)
48 1jl5_A Outer protein YOPM; leu 100.0 5.1E-38 1.7E-42 350.8 21.8 343 44-438 11-378 (454)
49 4f9c_A Cell division cycle 7-r 100.0 2.5E-38 8.5E-43 341.0 15.1 181 524-714 24-249 (361)
50 3uto_A Twitchin; kinase, muscl 100.0 6.8E-38 2.3E-42 358.0 18.8 229 523-765 159-410 (573)
51 2id5_A Lingo-1, leucine rich r 100.0 3.9E-37 1.3E-41 347.5 24.2 342 33-438 12-362 (477)
52 1o6v_A Internalin A; bacterial 100.0 2.9E-36 1E-40 339.1 29.9 338 44-433 46-389 (466)
53 3bz5_A Internalin-J, INLJ; leu 100.0 1E-36 3.4E-41 340.6 23.2 333 43-439 41-394 (457)
54 3s95_A LIMK-1, LIM domain kina 100.0 1.2E-36 4E-41 323.4 18.2 237 522-770 11-280 (310)
55 1o6v_A Internalin A; bacterial 100.0 1.6E-35 5.4E-40 333.1 26.6 320 43-409 67-392 (466)
56 3fxz_A Serine/threonine-protei 100.0 3.3E-36 1.1E-40 317.8 18.4 231 522-765 21-269 (297)
57 2psq_A Fibroblast growth facto 100.0 1E-35 3.4E-40 324.0 19.9 239 521-771 81-363 (370)
58 3o6n_A APL1; leucine-rich repe 100.0 2.6E-35 8.7E-40 323.7 21.0 308 44-406 45-354 (390)
59 3kul_A Ephrin type-A receptor 100.0 1.2E-35 4.1E-40 317.6 18.0 238 523-771 51-312 (325)
60 3cbl_A C-FES, proto-oncogene t 100.0 8.1E-36 2.8E-40 325.8 16.7 237 522-770 115-372 (377)
61 3bz5_A Internalin-J, INLJ; leu 100.0 7.3E-35 2.5E-39 325.5 24.8 308 56-433 30-353 (457)
62 3tki_A Serine/threonine-protei 100.0 1.6E-35 5.4E-40 316.4 18.3 233 523-765 9-261 (323)
63 3fe3_A MAP/microtubule affinit 100.0 2E-35 6.9E-40 315.8 19.1 229 521-765 15-264 (328)
64 4fcg_A Uncharacterized protein 100.0 1.1E-35 3.9E-40 317.8 16.9 275 1-308 26-313 (328)
65 2qkw_B Protein kinase; three-h 100.0 9.5E-35 3.3E-39 310.3 23.8 239 522-771 40-314 (321)
66 3p86_A Serine/threonine-protei 100.0 1.7E-35 5.9E-40 314.0 17.0 235 521-771 37-297 (309)
67 3zgw_A Maternal embryonic leuc 100.0 2.3E-35 7.8E-40 317.3 17.4 229 523-765 12-260 (347)
68 2c30_A Serine/threonine-protei 100.0 3.8E-35 1.3E-39 313.2 17.6 225 527-765 51-294 (321)
69 1opk_A P150, C-ABL, proto-onco 100.0 5.4E-35 1.9E-39 330.4 19.4 236 522-771 221-477 (495)
70 1jl5_A Outer protein YOPM; leu 100.0 1.1E-33 3.7E-38 315.8 29.5 325 45-438 72-417 (454)
71 4eqm_A Protein kinase; transfe 100.0 3.1E-35 1E-39 309.9 16.0 236 524-771 14-274 (294)
72 3q4u_A Activin receptor type-1 100.0 1.1E-34 3.8E-39 306.5 20.4 242 523-770 10-300 (301)
73 4fmz_A Internalin; leucine ric 100.0 3E-34 1E-38 310.0 23.8 302 44-432 44-346 (347)
74 4fmz_A Internalin; leucine ric 100.0 3.6E-34 1.2E-38 309.3 24.4 305 63-453 39-344 (347)
75 3oja_B Anopheles plasmodium-re 100.0 1.7E-34 5.7E-39 334.7 23.2 309 44-406 51-360 (597)
76 3vhe_A Vascular endothelial gr 100.0 2.8E-35 9.6E-40 319.5 15.6 241 521-771 22-354 (359)
77 3soc_A Activin receptor type-2 100.0 1.3E-34 4.4E-39 309.4 20.4 243 522-770 25-316 (322)
78 2qol_A Ephrin receptor; recept 100.0 2.5E-35 8.5E-40 321.1 15.2 237 523-770 47-307 (373)
79 3ugc_A Tyrosine-protein kinase 100.0 2.7E-35 9.2E-40 310.5 14.9 241 523-770 12-289 (295)
80 2zv2_A Calcium/calmodulin-depe 100.0 1.1E-34 3.6E-39 306.5 18.7 232 522-765 14-292 (298)
81 2ivs_A Proto-oncogene tyrosine 100.0 1.2E-34 4.3E-39 308.2 18.9 239 521-771 23-310 (314)
82 1ogq_A PGIP-2, polygalacturona 100.0 1.8E-34 6.3E-39 306.6 20.2 255 171-459 50-308 (313)
83 4hcu_A Tyrosine-protein kinase 100.0 9.9E-35 3.4E-39 301.9 17.7 234 522-770 11-264 (269)
84 2x4f_A Myosin light chain kina 100.0 1.8E-34 6E-39 314.2 19.9 225 527-765 95-342 (373)
85 3sxs_A Cytoplasmic tyrosine-pr 100.0 2.4E-34 8.3E-39 298.7 19.9 234 522-770 9-262 (268)
86 1o6l_A RAC-beta serine/threoni 100.0 2.1E-34 7.2E-39 308.8 19.4 229 522-765 6-260 (337)
87 3l9p_A Anaplastic lymphoma kin 100.0 7.3E-35 2.5E-39 316.9 15.9 236 523-770 73-343 (367)
88 2yab_A Death-associated protei 100.0 1.2E-34 4.1E-39 313.6 17.4 229 523-765 14-272 (361)
89 3poz_A Epidermal growth factor 100.0 1.1E-34 3.8E-39 310.5 16.3 235 523-770 17-276 (327)
90 4fr4_A YANK1, serine/threonine 100.0 2.8E-34 9.5E-39 312.6 19.6 230 521-764 15-270 (384)
91 1tki_A Titin; serine kinase, m 100.0 2.2E-34 7.5E-39 307.1 18.4 226 525-765 9-257 (321)
92 4f0f_A Serine/threonine-protei 100.0 2.2E-34 7.6E-39 302.2 18.1 232 522-770 20-287 (287)
93 1luf_A Muscle-specific tyrosin 100.0 1.5E-34 5.1E-39 311.7 17.1 238 522-771 48-334 (343)
94 1qcf_A Haematopoetic cell kina 100.0 1.6E-34 5.3E-39 323.5 17.4 233 523-771 190-443 (454)
95 3lb7_A RAF proto-oncogene seri 100.0 2.6E-34 9E-39 304.7 18.2 233 523-770 38-298 (307)
96 3kex_A Receptor tyrosine-prote 100.0 1.7E-34 5.7E-39 309.0 16.7 235 523-770 15-274 (325)
97 3gen_A Tyrosine-protein kinase 100.0 2.8E-34 9.5E-39 300.8 18.1 236 521-771 24-279 (283)
98 3c1x_A Hepatocyte growth facto 100.0 1.3E-34 4.5E-39 315.1 15.7 236 526-770 94-353 (373)
99 3tt0_A Basic fibroblast growth 100.0 2.6E-34 8.8E-39 314.5 18.1 238 522-771 70-351 (382)
100 2y0a_A Death-associated protei 100.0 3.3E-34 1.1E-38 306.7 18.5 228 524-765 14-271 (326)
101 2ft3_A Biglycan; proteoglycan, 100.0 1.6E-33 5.5E-38 302.2 23.9 250 46-366 35-286 (332)
102 3qup_A Tyrosine-protein kinase 100.0 2.2E-34 7.5E-39 307.7 17.1 243 522-771 24-297 (323)
103 4fvq_A Tyrosine-protein kinase 100.0 3.1E-34 1.1E-38 301.4 17.9 229 523-771 10-274 (289)
104 1rjb_A FL cytokine receptor; k 100.0 2.7E-34 9.3E-39 309.9 17.8 238 523-771 47-333 (344)
105 3txo_A PKC-L, NPKC-ETA, protei 100.0 3.2E-34 1.1E-38 309.5 18.4 230 521-765 23-280 (353)
106 3dtc_A Mitogen-activated prote 100.0 2.1E-34 7E-39 299.7 16.2 234 523-770 9-271 (271)
107 3c0i_A Peripheral plasma membr 100.0 1.7E-34 5.9E-39 312.1 16.1 227 525-765 28-286 (351)
108 3uim_A Brassinosteroid insensi 100.0 6.3E-35 2.2E-39 312.3 12.5 238 523-769 32-308 (326)
109 2bdw_A Hypothetical protein K1 100.0 3.5E-34 1.2E-38 310.7 18.4 229 523-765 31-284 (362)
110 3kmu_A ILK, integrin-linked ki 100.0 2.9E-34 1E-38 298.3 17.0 235 520-770 9-268 (271)
111 3soa_A Calcium/calmodulin-depe 100.0 6E-34 2E-38 316.3 20.0 229 524-765 14-267 (444)
112 3kfa_A Tyrosine-protein kinase 100.0 4.9E-34 1.7E-38 299.7 18.1 235 522-770 14-269 (288)
113 3h4j_B AMPK kdaid, SNF1-like p 100.0 2.6E-34 8.8E-39 307.8 16.2 227 522-765 10-258 (336)
114 1kob_A Twitchin; kinase, intra 100.0 5.4E-34 1.8E-38 311.3 18.9 229 523-765 53-304 (387)
115 1t46_A HOMO sapiens V-KIT hard 100.0 2.9E-34 9.9E-39 305.2 16.4 239 522-771 24-306 (313)
116 2eva_A TAK1 kinase - TAB1 chim 100.0 4.8E-34 1.6E-38 302.8 18.0 230 523-770 10-261 (307)
117 1k9a_A Carboxyl-terminal SRC k 100.0 8.2E-34 2.8E-38 317.1 20.8 229 522-770 194-443 (450)
118 1mp8_A Focal adhesion kinase 1 100.0 3.7E-34 1.3E-38 299.6 16.9 235 523-771 17-275 (281)
119 4dc2_A Protein kinase C IOTA t 100.0 4.9E-34 1.7E-38 311.7 18.5 227 521-760 52-307 (396)
120 2yex_A Serine/threonine-protei 100.0 1.2E-33 4E-38 294.8 20.3 232 524-765 10-261 (276)
121 3lxl_A Tyrosine-protein kinase 100.0 4.8E-34 1.7E-38 305.6 17.3 243 522-771 24-302 (327)
122 3f66_A Hepatocyte growth facto 100.0 7.2E-34 2.5E-38 300.0 18.2 239 524-771 28-290 (298)
123 2pvf_A Fibroblast growth facto 100.0 8.1E-34 2.8E-38 304.8 18.9 238 522-771 36-317 (334)
124 2buj_A Serine/threonine-protei 100.0 2.8E-34 9.6E-39 306.0 15.1 244 523-770 31-304 (317)
125 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 3.6E-34 1.2E-38 320.2 16.6 233 523-771 186-439 (452)
126 1u5q_A Serine/threonine protei 100.0 4.4E-34 1.5E-38 308.2 16.6 223 525-765 58-305 (348)
127 3pls_A Macrophage-stimulating 100.0 7.5E-34 2.6E-38 299.8 18.0 238 526-771 26-286 (298)
128 3qd2_B Eukaryotic translation 100.0 8.4E-34 2.9E-38 304.1 18.3 236 523-765 8-325 (332)
129 2w4o_A Calcium/calmodulin-depe 100.0 4.4E-34 1.5E-38 308.5 16.1 228 523-765 55-305 (349)
130 1fot_A TPK1 delta, CAMP-depend 100.0 1.2E-33 4.2E-38 300.6 19.0 226 522-765 7-258 (318)
131 1xku_A Decorin; proteoglycan, 100.0 5.2E-33 1.8E-37 298.0 24.0 249 46-364 33-283 (330)
132 1xjd_A Protein kinase C, theta 100.0 6E-34 2E-38 306.2 16.5 229 521-764 17-268 (345)
133 3gni_B Strad alpha; kinase fol 100.0 1.2E-33 4E-38 310.2 19.2 236 521-765 25-333 (389)
134 2ozo_A Tyrosine-protein kinase 100.0 7.2E-34 2.5E-38 328.8 18.3 232 527-770 342-596 (613)
135 3hko_A Calcium/calmodulin-depe 100.0 7E-34 2.4E-38 306.8 17.0 234 523-765 28-330 (345)
136 3a8x_A Protein kinase C IOTA t 100.0 1.8E-33 6.1E-38 302.9 20.1 227 521-760 9-264 (345)
137 1t4h_A Serine/threonine-protei 100.0 1.1E-33 3.7E-38 297.4 18.0 232 526-765 31-282 (290)
138 3brb_A Proto-oncogene tyrosine 100.0 8.9E-34 3.1E-38 301.6 17.4 242 523-771 36-307 (313)
139 1u59_A Tyrosine-protein kinase 100.0 1.5E-33 5E-38 296.0 18.6 232 527-770 16-270 (287)
140 3o0g_A Cell division protein k 100.0 1.2E-33 4.2E-38 297.4 17.8 229 525-765 6-282 (292)
141 1xku_A Decorin; proteoglycan, 100.0 1.7E-32 5.9E-37 294.0 27.0 281 31-354 30-329 (330)
142 3cc6_A Protein tyrosine kinase 100.0 1.7E-33 5.8E-38 294.5 18.7 236 521-770 12-271 (281)
143 3op5_A Serine/threonine-protei 100.0 4.2E-34 1.4E-38 310.8 14.6 243 523-771 37-328 (364)
144 2izr_A Casein kinase I isoform 100.0 1.1E-33 3.9E-38 303.1 17.7 236 523-770 11-279 (330)
145 4aw2_A Serine/threonine-protei 100.0 1E-33 3.5E-38 313.3 17.7 232 522-765 75-338 (437)
146 3v8s_A RHO-associated protein 100.0 4.4E-34 1.5E-38 313.8 14.7 233 521-765 69-329 (410)
147 2y94_A 5'-AMP-activated protei 100.0 1.7E-33 5.8E-38 314.7 19.6 229 521-765 16-266 (476)
148 2i1m_A Macrophage colony-stimu 100.0 7.7E-34 2.6E-38 304.9 16.1 235 525-770 50-324 (333)
149 4e5w_A Tyrosine-protein kinase 100.0 1.8E-33 6.2E-38 297.5 18.7 242 523-771 23-301 (302)
150 3f3z_A Calcium/calmodulin-depe 100.0 1.4E-33 4.8E-38 294.4 17.5 228 524-765 12-261 (277)
151 3uc3_A Serine/threonine-protei 100.0 1.1E-33 3.7E-38 306.9 17.2 228 523-765 22-274 (361)
152 4euu_A Serine/threonine-protei 100.0 1.2E-33 4.1E-38 301.5 17.2 237 523-770 11-307 (319)
153 3mdy_A Bone morphogenetic prot 100.0 3.8E-33 1.3E-37 299.8 21.3 242 523-770 39-329 (337)
154 3is5_A Calcium-dependent prote 100.0 9.5E-34 3.3E-38 297.1 16.2 228 523-765 24-278 (285)
155 1rdq_E PKA C-alpha, CAMP-depen 100.0 1.9E-33 6.5E-38 303.2 18.9 228 520-765 40-293 (350)
156 3p1a_A MYT1 kinase, membrane-a 100.0 9E-34 3.1E-38 301.2 16.1 223 525-765 61-304 (311)
157 2ft3_A Biglycan; proteoglycan, 100.0 7.5E-33 2.6E-37 297.0 23.4 243 32-341 33-285 (332)
158 1mqb_A Ephrin type-A receptor 100.0 1.1E-33 3.8E-38 303.5 16.7 236 524-770 47-307 (333)
159 4fl3_A Tyrosine-protein kinase 100.0 6.2E-34 2.1E-38 330.1 15.7 232 527-770 375-629 (635)
160 3t9t_A Tyrosine-protein kinase 100.0 1.5E-33 5.1E-38 292.5 16.9 233 523-770 10-262 (267)
161 3og7_A AKAP9-BRAF fusion prote 100.0 7.9E-34 2.7E-38 298.4 14.9 234 523-771 26-287 (289)
162 2wqm_A Serine/threonine-protei 100.0 3.7E-33 1.3E-37 296.4 20.0 237 522-770 33-295 (310)
163 1xbb_A Tyrosine-protein kinase 100.0 1.3E-33 4.5E-38 297.0 16.4 231 528-770 24-277 (291)
164 3i6u_A CDS1, serine/threonine- 100.0 1.3E-33 4.5E-38 312.4 17.0 228 523-765 137-399 (419)
165 2xir_A Vascular endothelial gr 100.0 9.1E-34 3.1E-38 301.8 15.2 239 523-771 29-309 (316)
166 2h34_A Serine/threonine-protei 100.0 1.3E-33 4.5E-38 299.7 16.3 238 521-771 34-295 (309)
167 3ork_A Serine/threonine protei 100.0 2.7E-34 9.4E-39 305.3 11.0 237 523-765 14-273 (311)
168 3lzb_A Epidermal growth factor 100.0 1E-33 3.5E-38 302.9 15.5 235 523-770 17-276 (327)
169 2clq_A Mitogen-activated prote 100.0 1.7E-33 5.7E-38 296.6 16.9 228 526-765 27-278 (295)
170 1qpc_A LCK kinase; alpha beta 100.0 3.6E-33 1.2E-37 291.7 19.0 233 522-770 14-267 (279)
171 1p4o_A Insulin-like growth fac 100.0 2.6E-33 8.9E-38 299.2 18.2 237 523-771 27-298 (322)
172 2eue_A Carbon catabolite derep 100.0 2.1E-33 7.2E-38 292.8 16.9 228 521-765 13-262 (275)
173 2nru_A Interleukin-1 receptor- 100.0 9.1E-33 3.1E-37 292.9 22.0 231 527-770 37-304 (307)
174 2ac3_A MAP kinase-interacting 100.0 2E-33 6.9E-38 299.2 16.9 231 527-765 19-295 (316)
175 1csn_A Casein kinase-1; phosph 100.0 2.7E-33 9.1E-38 295.5 17.6 237 523-770 12-281 (298)
176 2i0e_A Protein kinase C-beta I 100.0 2.3E-33 7.8E-38 302.6 17.4 229 521-764 20-275 (353)
177 3fdn_A Serine/threonine-protei 100.0 3.8E-33 1.3E-37 291.6 18.5 228 521-765 9-257 (279)
178 2h8h_A Proto-oncogene tyrosine 100.0 1.2E-33 4E-38 322.4 15.3 233 523-771 269-522 (535)
179 2acx_A G protein-coupled recep 100.0 3E-33 1E-37 316.9 18.5 230 522-765 185-444 (576)
180 4eut_A Serine/threonine-protei 100.0 2.6E-33 8.9E-38 308.0 17.4 238 523-771 11-308 (396)
181 1fvr_A Tyrosine-protein kinase 100.0 3.4E-33 1.2E-37 299.0 17.4 236 521-771 25-299 (327)
182 3niz_A Rhodanese family protei 100.0 4.8E-33 1.6E-37 295.6 18.0 228 523-765 23-300 (311)
183 4ejn_A RAC-alpha serine/threon 100.0 1.7E-33 5.8E-38 314.5 15.2 230 522-765 149-404 (446)
184 2pmi_A Negative RE, cyclin-dep 100.0 3.2E-33 1.1E-37 297.8 16.6 228 524-765 8-293 (317)
185 2vd5_A DMPK protein; serine/th 100.0 2.3E-33 7.9E-38 308.2 16.0 232 521-765 61-327 (412)
186 2r5t_A Serine/threonine-protei 100.0 3.1E-33 1.1E-37 303.7 16.7 231 521-766 38-290 (373)
187 3ttj_A Mitogen-activated prote 100.0 1.9E-33 6.5E-38 314.7 15.4 184 523-714 64-265 (464)
188 2w1i_A JAK2; chromosomal rearr 100.0 3E-33 1E-37 299.4 16.2 241 523-770 43-320 (326)
189 3kn6_A Ribosomal protein S6 ki 100.0 1.2E-33 4E-38 302.1 13.0 224 527-765 17-270 (325)
190 2a2a_A Death-associated protei 100.0 4.7E-33 1.6E-37 297.1 17.6 228 524-765 15-272 (321)
191 2zmd_A Dual specificity protei 100.0 2.9E-33 1E-37 306.6 16.1 229 524-765 59-320 (390)
192 3lxp_A Non-receptor tyrosine-p 100.0 3E-33 1E-37 298.2 15.7 240 524-770 34-308 (318)
193 1nxk_A MAP kinase-activated pr 100.0 6E-33 2E-37 305.1 18.4 225 527-765 68-321 (400)
194 3dls_A PAS domain-containing s 100.0 2.6E-33 8.8E-38 300.8 15.0 220 525-766 28-275 (335)
195 3a7i_A MST3 kinase, serine/thr 100.0 6.7E-33 2.3E-37 293.4 18.0 229 524-766 25-271 (303)
196 3oz6_A Mitogen-activated prote 100.0 4E-33 1.4E-37 305.8 16.9 184 524-714 12-233 (388)
197 3kk8_A Calcium/calmodulin depe 100.0 6.9E-33 2.4E-37 290.3 17.9 228 524-765 9-261 (284)
198 3dbq_A Dual specificity protei 100.0 3.1E-33 1.1E-37 301.4 15.2 229 524-765 12-273 (343)
199 3ll6_A Cyclin G-associated kin 100.0 8.7E-33 3E-37 296.8 18.5 241 523-770 30-306 (337)
200 3gxj_A TGF-beta receptor type- 100.0 1.4E-34 4.9E-39 305.9 4.4 240 525-770 7-295 (303)
201 2v62_A Serine/threonine-protei 100.0 2E-33 6.8E-38 303.2 13.4 243 523-770 39-326 (345)
202 3a62_A Ribosomal protein S6 ki 100.0 8.1E-33 2.8E-37 296.0 17.9 230 521-765 17-276 (327)
203 2rku_A Serine/threonine-protei 100.0 1.2E-32 4E-37 290.1 18.8 228 523-765 17-265 (294)
204 3nsz_A CK II alpha, casein kin 100.0 8.3E-33 2.9E-37 296.3 17.5 229 523-765 38-319 (330)
205 1b6c_B TGF-B superfamily recep 100.0 1.8E-32 6.2E-37 295.2 20.1 240 525-770 46-334 (342)
206 3lij_A Calcium/calmodulin depe 100.0 7.3E-33 2.5E-37 313.4 17.7 227 525-765 41-291 (494)
207 2owb_A Serine/threonine-protei 100.0 1.2E-32 4.1E-37 295.8 18.4 228 523-765 43-291 (335)
208 3cok_A Serine/threonine-protei 100.0 7.7E-33 2.6E-37 289.0 16.4 229 522-765 12-262 (278)
209 3rp9_A Mitogen-activated prote 100.0 7.4E-33 2.5E-37 310.6 17.4 182 523-708 55-280 (458)
210 1byg_A CSK, protein (C-termina 100.0 8.5E-33 2.9E-37 288.7 16.7 230 521-770 21-271 (278)
211 3g2f_A Bone morphogenetic prot 100.0 1.8E-32 6.1E-37 294.5 19.6 247 520-771 12-317 (336)
212 3fme_A Dual specificity mitoge 100.0 6.3E-33 2.1E-37 291.5 15.7 232 521-765 7-266 (290)
213 2w5a_A Serine/threonine-protei 100.0 5.1E-33 1.7E-37 290.5 14.6 236 523-767 8-269 (279)
214 1ob3_A PFPK5, cell division co 100.0 3.7E-33 1.3E-37 293.1 13.7 226 525-765 6-280 (288)
215 3mwu_A Calmodulin-domain prote 100.0 1E-32 3.5E-37 311.7 18.2 228 524-765 25-276 (486)
216 2qr7_A Ribosomal protein S6 ki 100.0 5.8E-33 2E-37 298.5 15.3 227 523-765 24-277 (342)
217 2yfx_A Tyrosine-protein kinase 100.0 7E-33 2.4E-37 296.6 15.7 237 522-770 31-302 (327)
218 3mi9_A Cell division protein k 100.0 7.7E-33 2.6E-37 299.4 16.0 239 522-765 18-311 (351)
219 3g33_A Cell division protein k 100.0 8.5E-33 2.9E-37 293.3 16.0 233 523-765 11-296 (308)
220 3bhy_A Death-associated protei 100.0 1.8E-32 6E-37 287.0 18.1 227 525-765 9-265 (283)
221 4agu_A Cyclin-dependent kinase 100.0 9.2E-33 3.2E-37 293.4 16.2 228 525-765 7-284 (311)
222 3c4z_A Rhodopsin kinase; Ser/T 100.0 1.8E-32 6.1E-37 309.9 19.3 227 521-760 185-438 (543)
223 3lm5_A Serine/threonine-protei 100.0 1.4E-32 4.9E-37 294.2 17.5 225 527-765 35-287 (327)
224 2vgo_A Serine/threonine-protei 100.0 2.6E-32 8.8E-37 286.0 19.0 228 521-765 14-262 (284)
225 2a19_B Interferon-induced, dou 100.0 8.8E-33 3E-37 289.3 15.3 228 524-770 14-272 (284)
226 3nyv_A Calmodulin-domain prote 100.0 6.4E-33 2.2E-37 313.4 15.2 228 524-765 29-281 (484)
227 2y7j_A Phosphorylase B kinase 100.0 1.6E-32 5.4E-37 298.3 17.6 226 526-765 99-359 (365)
228 4hgt_A Casein kinase I isoform 100.0 9.1E-33 3.1E-37 291.1 15.1 238 523-770 11-278 (296)
229 3an0_A Dual specificity mitoge 100.0 6.6E-33 2.3E-37 298.5 14.3 231 522-765 52-310 (340)
230 2j7t_A Serine/threonine-protei 100.0 4.2E-33 1.4E-37 294.7 12.5 230 523-765 21-275 (302)
231 1x8b_A WEE1HU, WEE1-like prote 100.0 3.2E-32 1.1E-36 285.5 19.1 222 523-765 13-279 (289)
232 3uzp_A CKI-delta, CKID, casein 100.0 2.1E-32 7.3E-37 288.3 17.7 238 523-770 11-278 (296)
233 2h6d_A 5'-AMP-activated protei 100.0 2.7E-32 9.3E-37 284.5 18.3 228 522-765 12-261 (276)
234 3q5i_A Protein kinase; CDPK, m 100.0 1.4E-32 4.7E-37 312.0 17.3 229 523-765 38-301 (504)
235 2jam_A Calcium/calmodulin-depe 100.0 9.8E-33 3.4E-37 292.3 14.9 228 523-765 11-261 (304)
236 2ycf_A Serine/threonine-protei 100.0 1.3E-32 4.4E-37 293.9 16.0 227 524-765 13-274 (322)
237 1u46_A ACK-1, activated CDC42 100.0 1.1E-32 3.8E-37 289.7 15.1 237 523-770 20-282 (291)
238 3eqc_A Dual specificity mitoge 100.0 7.5E-33 2.6E-37 300.6 13.8 231 522-765 34-324 (360)
239 3n9x_A Phosphotransferase; mal 100.0 2.6E-32 8.8E-37 303.4 18.2 187 523-713 28-253 (432)
240 3gbz_A Kinase, CMGC CDK; ssgci 100.0 8.5E-33 2.9E-37 296.2 13.5 230 522-765 35-318 (329)
241 4aaa_A Cyclin-dependent kinase 100.0 1.4E-32 4.8E-37 294.8 15.0 232 521-765 25-306 (331)
242 3qyz_A Mitogen-activated prote 100.0 3.4E-32 1.1E-36 295.8 18.1 237 523-765 29-313 (364)
243 3com_A Serine/threonine-protei 100.0 2.3E-32 8E-37 290.7 16.5 227 523-765 31-278 (314)
244 2pml_X PFPK7, Ser/Thr protein 100.0 2.9E-32 9.9E-37 294.4 16.9 227 522-765 32-322 (348)
245 2jii_A Serine/threonine-protei 100.0 7.3E-33 2.5E-37 299.7 11.6 236 523-771 44-335 (352)
246 1vzo_A Ribosomal protein S6 ki 100.0 1.6E-32 5.3E-37 297.2 14.0 234 521-766 54-322 (355)
247 3mtl_A Cell division protein k 100.0 7.4E-33 2.5E-37 296.0 11.3 227 525-765 6-281 (324)
248 2j0j_A Focal adhesion kinase 1 100.0 3.6E-32 1.2E-36 316.5 17.7 232 526-771 395-650 (656)
249 1phk_A Phosphorylase kinase; g 100.0 7.1E-32 2.4E-36 284.7 18.3 230 522-765 18-283 (298)
250 2b9h_A MAP kinase FUS3, mitoge 100.0 4.5E-32 1.5E-36 293.6 17.0 238 523-765 13-305 (353)
251 3pfq_A PKC-B, PKC-beta, protei 100.0 5E-32 1.7E-36 316.3 18.5 229 521-764 341-596 (674)
252 2z80_A TOLL-like receptor 2, v 100.0 5.5E-32 1.9E-36 292.9 17.5 285 23-358 21-315 (353)
253 2wtk_C Serine/threonine-protei 100.0 1E-31 3.4E-36 284.5 19.0 231 523-765 7-263 (305)
254 1cm8_A Phosphorylated MAP kina 100.0 2.5E-32 8.5E-37 296.8 14.4 230 524-765 28-307 (367)
255 2vwi_A Serine/threonine-protei 100.0 6.9E-33 2.4E-37 293.0 9.7 234 523-765 17-287 (303)
256 1ua2_A CAK, cell division prot 100.0 2.1E-32 7E-37 295.3 13.3 229 523-765 12-291 (346)
257 3llt_A Serine/threonine kinase 100.0 7.7E-32 2.6E-36 292.6 17.6 175 523-714 37-261 (360)
258 2i6l_A Mitogen-activated prote 100.0 1.1E-31 3.7E-36 286.1 18.4 235 524-765 14-305 (320)
259 2xrw_A Mitogen-activated prote 100.0 6.6E-32 2.3E-36 294.2 16.5 183 523-714 27-228 (371)
260 3sv0_A Casein kinase I-like; t 100.0 7.6E-32 2.6E-36 301.9 17.3 237 523-770 9-276 (483)
261 3eb0_A Putative uncharacterize 100.0 4.6E-32 1.6E-36 296.8 14.9 229 523-765 9-321 (383)
262 2x7f_A TRAF2 and NCK-interacti 100.0 7.9E-32 2.7E-36 288.2 15.6 234 523-765 26-286 (326)
263 1j1b_A Glycogen synthase kinas 100.0 4.8E-32 1.6E-36 300.0 14.3 229 523-765 56-336 (420)
264 2fst_X Mitogen-activated prote 100.0 6.7E-32 2.3E-36 293.2 15.1 231 523-765 31-311 (367)
265 3e7e_A HBUB1, BUB1A, mitotic c 100.0 2.4E-32 8.3E-37 297.1 11.3 227 524-770 68-337 (365)
266 2r3i_A Cell division protein k 100.0 9.1E-32 3.1E-36 284.0 15.3 228 524-765 6-283 (299)
267 2z66_A Variable lymphocyte rec 100.0 3.1E-31 1.1E-35 281.0 18.8 286 32-367 7-297 (306)
268 1z7x_W Ribonuclease inhibitor; 100.0 4E-34 1.4E-38 321.4 -3.7 357 44-432 3-411 (461)
269 2wei_A Calmodulin-domain prote 100.0 1.9E-31 6.3E-36 280.0 16.7 227 525-765 26-276 (287)
270 4e7w_A Glycogen synthase kinas 100.0 1E-31 3.5E-36 294.9 15.0 229 523-765 42-321 (394)
271 3byv_A Rhoptry kinase; malaria 100.0 2.1E-32 7E-37 298.9 9.2 225 522-765 74-359 (377)
272 1zy4_A Serine/threonine-protei 100.0 2.4E-31 8.3E-36 280.9 16.9 235 524-765 9-283 (303)
273 3kvw_A DYRK2, dual specificity 100.0 2.3E-31 7.9E-36 295.2 17.2 174 525-715 101-302 (429)
274 3q60_A ROP5B; pseudokinase, tr 100.0 3.6E-32 1.2E-36 296.4 10.4 232 523-765 64-352 (371)
275 3pg1_A Mitogen-activated prote 100.0 1.3E-31 4.4E-36 291.0 14.1 232 523-765 24-316 (362)
276 3rgf_A Cyclin-dependent kinase 100.0 1.3E-31 4.3E-36 295.6 13.9 177 528-714 28-238 (405)
277 4exu_A Mitogen-activated prote 100.0 1.6E-31 5.4E-36 291.2 14.4 230 524-765 45-323 (371)
278 2y4i_B KSR2, HKSR2, kinase sup 100.0 3E-32 1E-36 290.5 8.3 237 521-770 33-300 (319)
279 3coi_A Mitogen-activated prote 100.0 3.2E-31 1.1E-35 286.9 15.8 231 523-765 26-305 (353)
280 3cek_A Dual specificity protei 100.0 3.3E-31 1.1E-35 281.8 14.4 230 523-765 30-292 (313)
281 3aln_A Dual specificity mitoge 100.0 1.6E-31 5.6E-36 285.9 12.2 231 522-765 23-285 (327)
282 3e3p_A Protein kinase, putativ 100.0 2.7E-31 9.4E-36 288.2 14.0 235 523-765 25-314 (360)
283 3fhr_A MAP kinase-activated pr 100.0 6E-31 2E-35 282.6 15.6 224 528-765 36-287 (336)
284 4fcg_A Uncharacterized protein 100.0 1.1E-32 3.8E-37 294.7 1.9 281 16-357 26-314 (328)
285 2dyl_A Dual specificity mitoge 100.0 6E-31 2.1E-35 280.2 15.3 231 522-765 26-283 (318)
286 1z7x_W Ribonuclease inhibitor; 100.0 1E-33 3.5E-38 318.0 -6.8 360 67-454 2-410 (461)
287 1blx_A Cyclin-dependent kinase 100.0 7.4E-31 2.5E-35 280.6 15.6 233 523-765 13-296 (326)
288 3g06_A SSPH2 (leucine-rich rep 100.0 1.3E-30 4.4E-35 299.8 18.6 292 17-412 7-305 (622)
289 3a99_A Proto-oncogene serine/t 100.0 5.6E-31 1.9E-35 280.9 13.9 220 523-765 45-293 (320)
290 1wak_A Serine/threonine-protei 100.0 7E-31 2.4E-35 288.8 14.9 180 524-715 40-296 (397)
291 2iwi_A Serine/threonine-protei 100.0 4.1E-31 1.4E-35 280.8 11.8 219 524-765 34-283 (312)
292 2z66_A Variable lymphocyte rec 100.0 1.8E-30 6.2E-35 275.1 16.4 251 174-437 10-266 (306)
293 2pzi_A Probable serine/threoni 100.0 1.9E-30 6.4E-35 305.0 18.2 227 523-770 82-326 (681)
294 2vx3_A Dual specificity tyrosi 100.0 2.1E-30 7.3E-35 283.5 16.0 177 524-715 57-261 (382)
295 2rio_A Serine/threonine-protei 100.0 5.7E-31 1.9E-35 292.7 10.9 224 526-765 20-295 (434)
296 3oja_A Leucine-rich immune mol 100.0 3.9E-31 1.3E-35 298.0 9.3 235 170-427 33-270 (487)
297 1z57_A Dual specificity protei 100.0 2.8E-30 9.6E-35 277.4 14.6 175 523-714 16-236 (339)
298 2z80_A TOLL-like receptor 2, v 100.0 2.4E-30 8.1E-35 280.0 11.6 278 130-437 31-319 (353)
299 3uqc_A Probable conserved tran 100.0 2.6E-30 8.9E-35 270.8 11.5 222 524-770 34-263 (286)
300 3zyj_A Leucine-rich repeat-con 100.0 4E-29 1.4E-33 278.8 21.7 254 172-439 44-299 (440)
301 3zyi_A Leucine-rich repeat-con 100.0 3.6E-29 1.2E-33 280.1 21.3 252 173-438 56-309 (452)
302 3p23_A Serine/threonine-protei 100.0 1.6E-30 5.6E-35 288.2 9.1 224 525-765 28-283 (432)
303 2eu9_A Dual specificity protei 100.0 1E-29 3.5E-34 275.0 14.9 175 523-714 21-241 (355)
304 3zyi_A Leucine-rich repeat-con 100.0 1E-28 3.5E-33 276.4 23.2 244 49-357 59-303 (452)
305 1q8y_A SR protein kinase; tran 100.0 4.2E-30 1.5E-34 280.2 11.4 180 523-714 21-237 (373)
306 3qa8_A MGC80376 protein; kinas 100.0 1.7E-30 6E-35 297.0 5.8 231 521-763 14-295 (676)
307 1ozn_A Reticulon 4 receptor; N 100.0 6.1E-29 2.1E-33 260.5 16.3 253 174-439 14-268 (285)
308 3o53_A Protein LRIM1, AGAP0063 100.0 5.4E-30 1.9E-34 272.7 8.1 270 44-362 10-281 (317)
309 1ozn_A Reticulon 4 receptor; N 100.0 1.4E-28 4.8E-33 257.7 17.8 224 47-309 14-238 (285)
310 3m2w_A MAP kinase-activated pr 100.0 2E-29 6.9E-34 266.1 11.4 215 527-765 24-256 (299)
311 3zyj_A Leucine-rich repeat-con 100.0 8.2E-28 2.8E-32 268.1 23.4 247 132-405 45-293 (440)
312 1wwl_A Monocyte differentiatio 100.0 2E-30 6.7E-35 275.5 1.3 254 63-358 38-310 (312)
313 3o53_A Protein LRIM1, AGAP0063 100.0 2.1E-29 7.1E-34 268.2 8.2 263 151-436 14-280 (317)
314 1wwl_A Monocyte differentiatio 100.0 3.5E-29 1.2E-33 265.8 9.8 246 126-405 39-310 (312)
315 3g06_A SSPH2 (leucine-rich rep 100.0 7.3E-27 2.5E-31 268.6 26.0 263 68-438 40-303 (622)
316 2vuw_A Serine/threonine-protei 99.9 2E-29 6.7E-34 270.9 3.5 223 523-764 22-329 (336)
317 3dzo_A Rhoptry kinase domain; 99.9 1.4E-28 4.9E-33 271.5 9.8 224 523-765 80-363 (413)
318 2o6q_A Variable lymphocyte rec 99.9 9.3E-27 3.2E-31 241.8 20.3 217 29-285 2-218 (270)
319 3oja_A Leucine-rich immune mol 99.9 8.9E-28 3E-32 270.6 11.7 254 50-352 16-270 (487)
320 2z62_A TOLL-like receptor 4, v 99.9 5.5E-26 1.9E-30 236.8 19.5 231 175-437 11-242 (276)
321 2z62_A TOLL-like receptor 4, v 99.9 1.7E-25 5.9E-30 233.0 18.4 224 200-458 11-240 (276)
322 3ogk_B Coronatine-insensitive 99.9 4.4E-28 1.5E-32 281.1 -4.2 347 66-433 110-527 (592)
323 4azs_A Methyltransferase WBDD; 99.9 1.2E-26 4.2E-31 265.0 4.7 153 530-697 243-409 (569)
324 3m19_A Variable lymphocyte rec 99.9 1.2E-24 4.2E-29 223.2 18.3 193 29-262 2-194 (251)
325 1p9a_G Platelet glycoprotein I 99.9 2.9E-24 9.8E-29 225.1 19.2 199 44-285 10-208 (290)
326 2o6q_A Variable lymphocyte rec 99.9 4.1E-24 1.4E-28 221.8 19.3 204 172-407 17-221 (270)
327 1p9a_G Platelet glycoprotein I 99.9 2.4E-24 8.2E-29 225.7 16.7 203 167-404 6-208 (290)
328 3rfs_A Internalin B, repeat mo 99.9 6.2E-24 2.1E-28 220.7 18.3 207 44-297 41-247 (272)
329 3rfs_A Internalin B, repeat mo 99.9 5.9E-24 2E-28 220.8 16.3 186 167-366 59-244 (272)
330 2xwt_C Thyrotropin receptor; s 99.9 7.2E-24 2.5E-28 215.7 15.9 197 69-306 32-236 (239)
331 3ogk_B Coronatine-insensitive 99.9 3.5E-26 1.2E-30 265.1 -2.7 377 44-429 112-548 (592)
332 2xwt_C Thyrotropin receptor; s 99.9 1.6E-23 5.5E-28 213.2 15.6 208 182-429 22-236 (239)
333 3goz_A Leucine-rich repeat-con 99.9 1.6E-24 5.4E-29 235.0 7.3 263 48-337 2-301 (362)
334 2ast_B S-phase kinase-associat 99.9 6.7E-25 2.3E-29 235.4 4.3 268 30-365 35-314 (336)
335 3goz_A Leucine-rich repeat-con 99.9 5E-25 1.7E-29 239.0 2.9 263 152-434 3-299 (362)
336 2p1m_B Transport inhibitor res 99.9 2.9E-26 1E-30 265.8 -8.2 212 213-431 282-518 (594)
337 4glp_A Monocyte differentiatio 99.9 2.1E-23 7.1E-28 221.1 14.4 230 91-357 63-307 (310)
338 4glp_A Monocyte differentiatio 99.9 5.9E-24 2E-28 225.3 9.8 232 69-333 65-307 (310)
339 2ca6_A RAN GTPase-activating p 99.9 1.9E-25 6.6E-30 244.5 -2.0 250 60-359 24-318 (386)
340 3cvr_A Invasion plasmid antige 99.9 1.1E-23 3.8E-28 239.2 12.1 210 21-296 32-254 (571)
341 3m19_A Variable lymphocyte rec 99.9 4.9E-23 1.7E-27 211.2 14.3 180 172-359 15-194 (251)
342 4ay9_X Follicle-stimulating ho 99.9 1.3E-22 4.3E-27 218.9 15.8 238 174-429 12-256 (350)
343 4ay9_X Follicle-stimulating ho 99.9 3.4E-22 1.2E-26 215.5 18.2 198 71-308 12-214 (350)
344 2ca6_A RAN GTPase-activating p 99.9 2.1E-24 7.1E-29 236.3 0.6 250 162-436 23-320 (386)
345 2p1m_B Transport inhibitor res 99.9 2.1E-25 7.2E-30 258.6 -8.8 182 245-432 287-494 (594)
346 1h6u_A Internalin H; cell adhe 99.9 5.1E-22 1.7E-26 210.0 17.0 172 64-285 37-208 (308)
347 2ast_B S-phase kinase-associat 99.9 1.8E-23 6.1E-28 224.3 5.6 215 167-389 89-315 (336)
348 1h6u_A Internalin H; cell adhe 99.9 5.8E-22 2E-26 209.6 16.2 195 126-358 37-231 (308)
349 2o6s_A Variable lymphocyte rec 99.9 8.1E-22 2.8E-26 196.0 14.4 180 32-268 7-186 (208)
350 3en9_A Glycoprotease, O-sialog 99.9 1.2E-22 4.2E-27 230.6 8.2 154 527-697 342-506 (540)
351 4b8c_D Glucose-repressible alc 99.9 9.3E-23 3.2E-27 240.1 6.8 231 1-293 131-362 (727)
352 2o6s_A Variable lymphocyte rec 99.8 9.4E-21 3.2E-25 188.2 14.8 180 174-368 10-189 (208)
353 3e6j_A Variable lymphocyte rec 99.8 2.9E-20 9.9E-25 187.6 17.0 165 22-234 9-173 (229)
354 3cvr_A Invasion plasmid antige 99.8 1.6E-20 5.5E-25 213.2 16.7 196 69-345 60-255 (571)
355 1zar_A RIO2 kinase; serine kin 99.8 1.1E-20 3.7E-25 196.7 10.4 127 527-671 96-240 (282)
356 2xot_A Amphoterin-induced prot 99.8 3.3E-20 1.1E-24 200.8 12.2 179 250-436 21-206 (361)
357 2v70_A SLIT-2, SLIT homolog 2 99.8 4.6E-20 1.6E-24 184.8 12.2 157 250-437 14-171 (220)
358 2xot_A Amphoterin-induced prot 99.8 4.6E-20 1.6E-24 199.7 12.6 176 174-357 21-202 (361)
359 1dce_A Protein (RAB geranylger 99.8 9.7E-23 3.3E-27 232.7 -9.4 203 65-289 346-550 (567)
360 2v9t_B SLIT homolog 2 protein 99.8 7.7E-20 2.6E-24 183.2 12.7 151 250-404 14-165 (220)
361 1h6t_A Internalin B; cell adhe 99.8 1.2E-19 4.2E-24 190.0 14.4 185 50-286 30-214 (291)
362 1m9s_A Internalin B; cell inva 99.8 1.3E-19 4.3E-24 208.2 15.0 190 46-287 23-212 (605)
363 2v70_A SLIT-2, SLIT homolog 2 99.8 3E-19 1E-23 178.9 13.4 156 223-408 14-170 (220)
364 2v9t_B SLIT homolog 2 protein 99.8 4.9E-19 1.7E-23 177.4 14.0 159 274-439 13-172 (220)
365 1h6t_A Internalin B; cell adhe 99.8 4.5E-19 1.5E-23 185.7 13.8 173 167-358 42-214 (291)
366 1dce_A Protein (RAB geranylger 99.8 9.1E-22 3.1E-26 224.6 -8.8 219 168-426 346-567 (567)
367 1m9s_A Internalin B; cell inva 99.8 8.8E-19 3E-23 201.1 15.1 180 167-365 39-218 (605)
368 3sb4_A Hypothetical leucine ri 99.8 2.5E-19 8.6E-24 191.3 9.2 225 162-397 92-327 (329)
369 4b8c_D Glucose-repressible alc 99.8 1.6E-19 5.6E-24 212.4 6.8 192 226-432 207-404 (727)
370 3e6j_A Variable lymphocyte rec 99.8 4E-18 1.4E-22 171.8 14.9 153 172-357 20-172 (229)
371 1xeu_A Internalin C; cellular 99.7 2.8E-19 9.5E-24 184.3 4.2 171 169-359 17-187 (263)
372 1xeu_A Internalin C; cellular 99.7 5.1E-19 1.7E-23 182.4 6.0 169 66-285 17-185 (263)
373 4ezg_A Putative uncharacterize 99.7 6.5E-18 2.2E-22 166.1 11.3 154 168-357 41-194 (197)
374 1zth_A RIO1 serine protein kin 99.7 3.6E-18 1.2E-22 175.4 9.2 133 527-673 53-219 (258)
375 4ezg_A Putative uncharacterize 99.7 1.8E-17 6E-22 163.0 12.8 151 145-308 42-193 (197)
376 1w8a_A SLIT protein; signaling 99.7 1.6E-17 5.5E-22 162.5 11.3 130 274-406 10-141 (192)
377 1w8a_A SLIT protein; signaling 99.7 4.5E-17 1.6E-21 159.3 11.5 127 250-380 11-139 (192)
378 3sb4_A Hypothetical leucine ri 99.7 1.8E-17 6.3E-22 176.8 8.5 227 186-426 83-328 (329)
379 4fdw_A Leucine rich hypothetic 99.7 4.4E-15 1.5E-19 162.0 21.5 267 65-380 110-383 (401)
380 2ell_A Acidic leucine-rich nuc 99.6 4.3E-16 1.5E-20 148.8 10.9 38 68-105 24-62 (168)
381 2wfh_A SLIT homolog 2 protein 99.6 3.8E-16 1.3E-20 152.7 10.2 113 321-438 32-145 (193)
382 2ell_A Acidic leucine-rich nuc 99.6 9.3E-16 3.2E-20 146.4 11.6 108 195-308 23-132 (168)
383 4fdw_A Leucine rich hypothetic 99.6 8.9E-15 3E-19 159.6 19.9 222 165-404 130-358 (401)
384 2wfh_A SLIT homolog 2 protein 99.6 1.8E-15 6.2E-20 147.9 12.5 126 174-308 13-138 (193)
385 2je0_A Acidic leucine-rich nuc 99.6 1.1E-15 3.7E-20 142.8 8.5 38 68-105 17-55 (149)
386 2o6r_A Variable lymphocyte rec 99.6 4.3E-15 1.5E-19 143.1 12.3 128 173-308 9-136 (177)
387 2je0_A Acidic leucine-rich nuc 99.6 2.1E-15 7.1E-20 140.9 8.8 106 196-307 17-124 (149)
388 2o6r_A Variable lymphocyte rec 99.6 6E-15 2.1E-19 142.1 11.8 62 371-436 80-141 (177)
389 1ds9_A Outer arm dynein; leuci 99.5 3.8E-17 1.3E-21 160.7 -7.0 65 168-235 90-155 (198)
390 4fs7_A Uncharacterized protein 99.5 3.8E-13 1.3E-17 147.1 23.4 311 56-400 59-375 (394)
391 1a9n_A U2A', U2A'; complex (nu 99.5 9.3E-15 3.2E-19 140.7 9.1 90 169-260 62-153 (176)
392 1a9n_A U2A', U2A'; complex (nu 99.5 9.1E-15 3.1E-19 140.7 8.0 111 166-285 14-126 (176)
393 4fs7_A Uncharacterized protein 99.5 2.7E-13 9.2E-18 148.3 20.6 311 79-429 58-376 (394)
394 1ds9_A Outer arm dynein; leuci 99.5 3.8E-16 1.3E-20 153.5 -2.4 156 167-357 14-185 (198)
395 4gyi_A RIO2 kinase; protein ki 99.5 1.6E-14 5.6E-19 153.9 8.5 130 526-671 100-263 (397)
396 3g39_A Variable lymphocyte rec 99.5 1.8E-13 6E-18 130.8 10.2 108 322-436 11-119 (170)
397 3g39_A Variable lymphocyte rec 99.4 1.9E-13 6.6E-18 130.5 9.9 107 172-286 10-116 (170)
398 2r9u_A Variable lymphocyte rec 99.4 3.8E-13 1.3E-17 128.9 9.9 105 173-285 14-118 (174)
399 2r9u_A Variable lymphocyte rec 99.4 4.7E-13 1.6E-17 128.3 10.3 107 323-436 15-122 (174)
400 4gt6_A Cell surface protein; l 99.3 7.3E-11 2.5E-15 128.8 23.0 324 57-431 52-390 (394)
401 4gt6_A Cell surface protein; l 99.3 7.8E-11 2.7E-15 128.6 22.4 313 45-404 65-391 (394)
402 2ifg_A High affinity nerve gro 99.3 4.9E-12 1.7E-16 135.7 11.0 107 32-185 8-117 (347)
403 3un9_A NLR family member X1; l 99.2 1.8E-13 6E-18 147.9 -5.5 97 316-432 179-283 (372)
404 2ifg_A High affinity nerve gro 99.2 3.1E-11 1.1E-15 129.4 11.7 93 162-260 23-116 (347)
405 3un9_A NLR family member X1; l 99.2 4.2E-13 1.4E-17 144.9 -4.0 169 246-433 71-253 (372)
406 3tm0_A Aminoglycoside 3'-phosp 99.0 3.7E-10 1.3E-14 115.8 9.5 134 529-671 22-212 (263)
407 4h09_A Hypothetical leucine ri 99.0 3.8E-08 1.3E-12 106.6 24.1 294 62-401 40-343 (379)
408 4h09_A Hypothetical leucine ri 99.0 3.2E-08 1.1E-12 107.1 23.5 298 44-391 46-356 (379)
409 1nd4_A Aminoglycoside 3'-phosp 99.0 1E-09 3.5E-14 112.2 8.6 127 531-671 30-213 (264)
410 3dxp_A Putative acyl-COA dehyd 98.9 1.2E-08 4.2E-13 109.6 12.9 143 526-672 43-248 (359)
411 2ra8_A Uncharacterized protein 98.7 1.1E-08 3.9E-13 109.3 7.9 203 44-283 107-341 (362)
412 2ra8_A Uncharacterized protein 98.7 8.7E-09 3E-13 110.2 5.6 117 165-286 166-293 (362)
413 3rw6_A Nuclear RNA export fact 98.6 2.9E-09 1E-13 108.0 -1.5 21 31-51 77-97 (267)
414 3sg8_A APH(2'')-ID; antibiotic 98.5 8.6E-08 3E-12 100.4 6.0 135 529-672 28-223 (304)
415 3rw6_A Nuclear RNA export fact 98.4 3.7E-08 1.3E-12 99.9 1.1 85 176-264 148-237 (267)
416 1io0_A Tropomodulin; LRR prote 98.3 7.5E-08 2.6E-12 92.8 0.1 44 62-105 30-78 (185)
417 1io0_A Tropomodulin; LRR prote 98.3 7.9E-08 2.7E-12 92.6 -0.6 123 291-432 31-164 (185)
418 3r70_A Aminoglycoside phosphot 98.2 3E-06 1E-10 89.3 10.5 130 527-672 43-237 (320)
419 3d1u_A Putative fructosamine-3 98.1 1E-05 3.4E-10 83.6 11.8 74 527-610 21-97 (288)
420 3tdw_A Gentamicin resistance p 98.1 9.5E-06 3.2E-10 84.7 11.4 133 529-672 27-224 (306)
421 4gkh_A Aminoglycoside 3'-phosp 98.0 1.3E-05 4.6E-10 81.9 10.3 128 535-671 39-222 (272)
422 3ovc_A Hygromycin-B 4-O-kinase 97.9 4.6E-05 1.6E-09 81.5 12.1 131 527-672 47-243 (362)
423 3ats_A Putative uncharacterize 97.8 4.4E-05 1.5E-09 81.5 8.4 140 530-671 30-251 (357)
424 2olc_A MTR kinase, methylthior 97.7 0.00015 5.1E-09 78.6 11.3 75 527-608 36-120 (397)
425 3jr1_A Putative fructosamine-3 97.3 0.0014 5E-08 68.0 12.9 74 527-610 42-118 (312)
426 3e4g_A ATP synthase subunit S, 97.2 0.00017 5.7E-09 67.8 3.7 82 221-305 62-148 (176)
427 2q83_A YTAA protein; 2635576, 97.1 0.0026 8.8E-08 67.0 12.6 31 641-671 221-251 (346)
428 3e4g_A ATP synthase subunit S, 97.1 0.00015 5E-09 68.1 2.1 84 44-141 61-150 (176)
429 3rfe_A Platelet glycoprotein I 97.0 0.0012 4.2E-08 58.8 6.8 61 371-437 12-73 (130)
430 3f7w_A Putative fructosamine-3 96.9 0.0016 5.5E-08 67.0 8.0 75 526-610 20-97 (288)
431 3rfe_A Platelet glycoprotein I 96.9 0.00094 3.2E-08 59.6 5.1 56 175-233 12-68 (130)
432 2pyw_A Uncharacterized protein 96.8 0.006 2.1E-07 66.4 12.4 31 641-672 231-261 (420)
433 1pgv_A TMD-1, tropomodulin TMD 96.7 0.00032 1.1E-08 67.1 0.8 44 387-430 122-168 (197)
434 3dxq_A Choline/ethanolamine ki 96.6 0.0036 1.2E-07 64.8 7.7 127 526-671 23-201 (301)
435 2qg7_A Ethanolamine kinase PV0 96.3 0.012 4E-07 64.6 9.9 74 527-610 114-188 (458)
436 2ppq_A HSK, HK, homoserine kin 96.2 0.0063 2.2E-07 63.4 6.8 139 528-671 29-216 (322)
437 1nw1_A Choline kinase (49.2 KD 96.1 0.0098 3.4E-07 64.8 8.0 72 528-610 80-159 (429)
438 3feg_A Choline/ethanolamine ki 96.0 0.012 3.9E-07 62.9 7.7 134 528-671 57-253 (379)
439 1pgv_A TMD-1, tropomodulin TMD 95.9 0.0024 8.3E-08 61.0 1.9 70 215-285 36-111 (197)
440 3c5i_A Choline kinase; choline 95.8 0.016 5.5E-07 61.7 8.2 74 527-610 39-121 (369)
441 1zyl_A Hypothetical protein YI 95.7 0.045 1.5E-06 57.0 11.1 135 532-672 36-223 (328)
442 3csv_A Aminoglycoside phosphot 95.7 0.029 9.8E-07 58.8 9.3 32 641-672 182-217 (333)
443 3i1a_A Spectinomycin phosphotr 94.4 0.21 7.1E-06 52.3 11.4 31 642-672 206-236 (339)
444 3f2s_A CK, chetk-alpha, cholin 93.9 0.1 3.5E-06 55.8 7.8 47 642-707 244-296 (401)
445 4ann_A ESSB; membrane protein, 91.9 0.31 1.1E-05 46.7 7.1 116 575-719 42-164 (215)
446 3mes_A Choline kinase; malaria 91.7 0.14 4.7E-06 55.4 5.0 73 528-610 77-157 (424)
447 3g15_A CK, chetk-alpha, cholin 90.0 0.96 3.3E-05 48.4 9.7 45 644-707 246-296 (401)
448 4ano_A ESSB; membrane protein, 81.9 3 0.0001 40.0 7.2 111 575-715 47-165 (219)
449 3cxl_A N-chimerin; SH2, RHO-GA 76.1 0.26 9E-06 53.9 -2.5 56 534-589 152-215 (463)
450 2ks1_B Epidermal growth factor 72.0 3.5 0.00012 28.3 3.2 8 501-508 32-39 (44)
451 2l2t_A Receptor tyrosine-prote 68.4 3.7 0.00013 28.1 2.7 9 501-509 31-39 (44)
452 2jwa_A Receptor tyrosine-prote 59.4 6.9 0.00024 26.7 2.7 9 501-509 32-40 (44)
453 2yle_A Protein spire homolog 1 55.2 59 0.002 31.1 9.5 136 614-768 43-197 (229)
454 2lz0_A Uncharacterized protein 52.0 17 0.00057 30.0 4.6 50 53-103 5-54 (100)
455 2lz0_A Uncharacterized protein 30.1 83 0.0028 25.6 5.5 46 283-329 7-52 (100)
456 1cja_A Protein (actin-fragmin 20.7 3.3E+02 0.011 27.7 8.8 131 535-672 82-237 (342)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=6.2e-61 Score=572.62 Aligned_cols=457 Identities=30% Similarity=0.485 Sum_probs=306.2
Q ss_pred CccHHHHHHHHhcCCCCCCCCCCCCCCCCCCccceeeeecCCCCcEEEEEcCCCCCccc---CC----------------
Q 041479 1 EPDKQALLAFKSKVDDDPFGALSTWNDSVNFCQWLGVTCSLKYQRVILLNLSGQNLTGT---AS---------------- 61 (771)
Q Consensus 1 ~~~~~~l~~~~~~~~~~~~~~~~~w~~~~~~c~w~~v~c~~~~~~l~~L~Ls~n~l~~~---~~---------------- 61 (771)
|+|++|||+||+++. ||. .+++|..++|||+|.||+|+ .++|+.|||+++.+.|. +|
T Consensus 11 ~~~~~all~~k~~~~-~~~-~l~~W~~~~~~C~w~gv~C~--~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~~l~~~~ 86 (768)
T 3rgz_A 11 YREIHQLISFKDVLP-DKN-LLPDWSSNKNPCTFDGVTCR--DDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLESLFLSN 86 (768)
T ss_dssp HHHHHHHHHHHTTCS-CTT-SSTTCCTTSCGGGSTTEEEE--TTEEEEEECTTSCCCEEHHHHHHHTTTCTTCCEEECTT
T ss_pred HHHHHHHHHHHhhCC-Ccc-cccCCCCCCCCcCCcceEEC--CCcEEEEECCCCCcCCccCccChhHhccCcccccCCcC
Confidence 468999999999996 677 89999888899999999998 37999999999888875 32
Q ss_pred -------ccccCCCCCcEEEcCCCcccccCCc--cccCCCCCCEEecccCcCcccCCccc--------------------
Q 041479 62 -------PYIGNLTFLRLINLQQNNFSSNIPH--EIGRLFRLRHIIFNSNALQGQIPDSR-------------------- 112 (771)
Q Consensus 62 -------~~~~~l~~L~~L~Ls~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~~-------------------- 112 (771)
+.|+.+++|++|||++|.+++.+|. .|+++++|++|+|++|.+++.+|...
T Consensus 87 ~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~ 166 (768)
T 3rgz_A 87 SHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSANSISGA 166 (768)
T ss_dssp SCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCSSCCEEE
T ss_pred CCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCCCccCCc
Confidence 4677788888888888888877777 67777777777777666554333210
Q ss_pred ----------------------------------------ccCCcccc-----------------------cCCccccCC
Q 041479 113 ----------------------------------------LILNKLEG-----------------------NIPSELGSL 129 (771)
Q Consensus 113 ----------------------------------------l~~n~l~~-----------------------~~p~~~~~l 129 (771)
+..|++++ .+|..|+++
T Consensus 167 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~l~~l 246 (768)
T 3rgz_A 167 NVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPFLGDCSALQHLDISGNKLSGDFSRAISTC 246 (768)
T ss_dssp THHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCBCTTCCSCCEEECCSSCCCSCHHHHTTTC
T ss_pred CChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcccccCCCCCEEECcCCcCCCcccHHHhcC
Confidence 11222223 333334444
Q ss_pred CCCCEEecccccCcCC------------------------------CCccceeeecccccccccCccccCCCCCCEEecc
Q 041479 130 LKFKGLGLANNYFTGP------------------------------IPHLNMFQVSVYSLTGSIPIQLLNITSMEYFHVS 179 (771)
Q Consensus 130 ~~L~~L~Ls~N~l~~~------------------------------lp~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls 179 (771)
++|++|++++|++++. ++.|+.|+++.|.+++.+|..|.++++|++|+++
T Consensus 247 ~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~ 326 (768)
T 3rgz_A 247 TELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALS 326 (768)
T ss_dssp SSCCEEECCSSCCEESCCCCCCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECC
T ss_pred CCCCEEECCCCcccCccCccccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECC
Confidence 4444444444433321 1334555555555555555555566666666666
Q ss_pred cCcCcccCChhhhhCCCCCcEEEeecCccc--------------------------------------------------
Q 041479 180 ENQLVGELPPHIGFTLPNVRILLLAGNQFF-------------------------------------------------- 209 (771)
Q Consensus 180 ~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~-------------------------------------------------- 209 (771)
+|+++|.+|...+..+++|++|++++|+++
T Consensus 327 ~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l 406 (768)
T 3rgz_A 327 SNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGF 406 (768)
T ss_dssp SSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEE
T ss_pred CCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCcc
Confidence 666655555543224444444444444333
Q ss_pred -ccCCccccCCCCCCEEEccccccCCCCCcCccc---------------------ccCCCCCcEEEccCccccccCChhh
Q 041479 210 -GNIPHSISNASKLEWLDFANNSLTGLIPEDLDS---------------------LVNCTYLEVVSLSVNSLSGTLPNSL 267 (771)
Q Consensus 210 -~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~---------------------l~~l~~L~~L~Ls~N~l~~~~p~~~ 267 (771)
+.+|..|.++++|++|+|++|++++.+|..|.. +..+++|++|++++|++++.+|..+
T Consensus 407 ~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l 486 (768)
T 3rgz_A 407 TGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGL 486 (768)
T ss_dssp EEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGG
T ss_pred ccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHH
Confidence 334444445555555555555555554444311 1233444445555555554555555
Q ss_pred hhcccccceeecccCcCcccCcccccccCCcceEecCCccceeccCccccCCCCCCEEEccCCcccccCCccc-------
Q 041479 268 ANFSSHLRYLYMSANPISGSIPTEIGNLKNLIIIAIEKFILIRNIPISVGYLLKLQVLSLFENNISREIPSSL------- 340 (771)
Q Consensus 268 ~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~------- 340 (771)
..+. +|++|++++|++++.+|..|+.+++|+.|++++|.+.+.+|..+..+++|+.|++++|++++.+|..+
T Consensus 487 ~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~ 565 (768)
T 3rgz_A 487 SNCT-NLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKI 565 (768)
T ss_dssp GGCT-TCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCB
T ss_pred hcCC-CCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchh
Confidence 5543 46666666666666666666666666666666666666666666666666666666666665555432
Q ss_pred ---------------------------------------------------------------ccccccccccccCccce
Q 041479 341 ---------------------------------------------------------------GNFTFLTELNLCGNSIR 357 (771)
Q Consensus 341 ---------------------------------------------------------------~~l~~L~~L~Ls~N~l~ 357 (771)
..+++|+.|||++|+++
T Consensus 566 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~ 645 (768)
T 3rgz_A 566 AANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLS 645 (768)
T ss_dssp CCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCB
T ss_pred hhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCccc
Confidence 23456777788888888
Q ss_pred ecCCcccccccce-eeecccCcccCCCCcCCCCCCCCCeEECCCCcccccCCcchhhhhcccccccEEECcCCCCCCCCC
Q 041479 358 GSVPSALGSCHQL-WLDLSHNHLTGPIPLAVGNPKSIPHLDLSKNELSGEIPSSLAWIFGYISIFAKLNLSYNNLDGDVP 436 (771)
Q Consensus 358 ~~~p~~~~~l~~l-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~l~~L~~L~Ls~N~l~~~~p 436 (771)
|.+|..++.++.| .|+|++|+++|.+|..|+.+++|+.|||++|+++|.+|..+. .++.|+.|||++|+++|.+|
T Consensus 646 g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~----~l~~L~~L~ls~N~l~g~iP 721 (768)
T 3rgz_A 646 GYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMS----ALTMLTEIDLSNNNLSGPIP 721 (768)
T ss_dssp SCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGG----GCCCCSEEECCSSEEEEECC
T ss_pred ccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHh----CCCCCCEEECcCCcccccCC
Confidence 8888888888888 899999999999999999999999999999999999998766 88999999999999999999
Q ss_pred ccccccccccccccCCCcccCCCCCCCCCCCCCC
Q 041479 437 RKMIFKNASAISEAGNEKLCGGISELKLPPCTPS 470 (771)
Q Consensus 437 ~~~~~~~~~~~~~~~n~~lc~~~~~~~~~~~~~~ 470 (771)
...++.++...++.||+.+||.+ +++|.+.
T Consensus 722 ~~~~~~~~~~~~~~gN~~Lcg~~----l~~C~~~ 751 (768)
T 3rgz_A 722 EMGQFETFPPAKFLNNPGLCGYP----LPRCDPS 751 (768)
T ss_dssp SSSSGGGSCGGGGCSCTEEESTT----SCCCCSC
T ss_pred CchhhccCCHHHhcCCchhcCCC----CcCCCCC
Confidence 98889999999999999999975 3578654
No 2
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=3.2e-53 Score=494.76 Aligned_cols=438 Identities=21% Similarity=0.279 Sum_probs=360.5
Q ss_pred ccHHHHHHHHhcCCCCCCC-------CCCCCCCCCCCccc---eeeeecCCCCcEEEEEcCCCCCcccCCccccCCCCCc
Q 041479 2 PDKQALLAFKSKVDDDPFG-------ALSTWNDSVNFCQW---LGVTCSLKYQRVILLNLSGQNLTGTASPYIGNLTFLR 71 (771)
Q Consensus 2 ~~~~~l~~~~~~~~~~~~~-------~~~~w~~~~~~c~w---~~v~c~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~ 71 (771)
.|++||.+|++++..+.+. ..++|+.+++||.| .||+|+.. ++|+.|+|++|+++|.+|++|+.|++|+
T Consensus 30 ~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~~~~~c~w~~~~GV~C~~~-~~V~~L~L~~~~l~g~lp~~l~~L~~L~ 108 (636)
T 4eco_A 30 KDYLALKEIWDALNGKNWSQQGFGTQPGANWNFNKELDMWGAQPGVSLNSN-GRVTGLSLEGFGASGRVPDAIGQLTELE 108 (636)
T ss_dssp HHHHHHHHHHHHTTGGGCCCCC------CCCCCSSCGGGTTCCTTEEECTT-CCEEEEECTTSCCEEEECGGGGGCTTCC
T ss_pred HHHHHHHHHHHHcCCCCcccCCcCCccCCCCCCCCCcccccCCCCeEEcCC-CCEEEEEecCcccCCcCChHHhcCccce
Confidence 4889999999998665444 23489988999999 99999876 7999999999999999999999999999
Q ss_pred EEEcCCCc------------------------------------------------------------------------
Q 041479 72 LINLQQNN------------------------------------------------------------------------ 79 (771)
Q Consensus 72 ~L~Ls~N~------------------------------------------------------------------------ 79 (771)
+|+|++|.
T Consensus 109 ~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~l~l 188 (636)
T 4eco_A 109 VLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKDTQI 188 (636)
T ss_dssp EEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCCCTTTT
T ss_pred EEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccchhhhhh
Confidence 99999994
Q ss_pred ------ccccCCccccCCCCCCEEecccCcCccc-CCcccc--cCCcccccCCcccc--CCCCCCEEecccccCcCCCC-
Q 041479 80 ------FSSNIPHEIGRLFRLRHIIFNSNALQGQ-IPDSRL--ILNKLEGNIPSELG--SLLKFKGLGLANNYFTGPIP- 147 (771)
Q Consensus 80 ------l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~l--~~n~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~lp- 147 (771)
+++ +|.+|+++++|++|+|++|++++. ++..+. ..+...+.+|..++ ++++|++|+|++|++.+.+|
T Consensus 189 ~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~ 267 (636)
T 4eco_A 189 GQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPT 267 (636)
T ss_dssp TCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCT
T ss_pred ccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChH
Confidence 445 788899999999999999998762 221111 01122233888888 99999999999998886554
Q ss_pred ------ccceeeecccc-ccc-ccCccccCC------CCCCEEecccCcCcccCCh--hhhhCCCCCcEEEeecCccccc
Q 041479 148 ------HLNMFQVSVYS-LTG-SIPIQLLNI------TSMEYFHVSENQLVGELPP--HIGFTLPNVRILLLAGNQFFGN 211 (771)
Q Consensus 148 ------~L~~l~l~~n~-l~~-~~p~~~~~l------~~L~~L~Ls~N~l~g~lp~--~~~~~l~~L~~L~L~~N~l~~~ 211 (771)
.|+.|+++.|+ ++| .+|..+.++ ++|++|++++|+++ .+|. .+. .+++|+.|++++|+++|.
T Consensus 268 ~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~-~l~~L~~L~L~~N~l~g~ 345 (636)
T 4eco_A 268 FLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQ-KMKKLGMLECLYNQLEGK 345 (636)
T ss_dssp TTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHT-TCTTCCEEECCSCCCEEE
T ss_pred HHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhc-cCCCCCEEeCcCCcCccc
Confidence 58899999998 888 888888776 89999999999998 8988 665 889999999999999988
Q ss_pred CCccccCCCCCCEEEccccccCCCCCcCcccccCCCC-CcEEEccCccccccCChhhhhcc-cccceeecccCcCcccCc
Q 041479 212 IPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTY-LEVVSLSVNSLSGTLPNSLANFS-SHLRYLYMSANPISGSIP 289 (771)
Q Consensus 212 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~-L~~L~Ls~N~l~~~~p~~~~~l~-~~L~~L~Ls~N~l~~~~p 289 (771)
+| .|..+++|++|+|++|+++ .+|..+ .++++ |++|++++|+++ .+|..+.... ++|++|++++|++++.+|
T Consensus 346 ip-~~~~l~~L~~L~L~~N~l~-~lp~~l---~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p 419 (636)
T 4eco_A 346 LP-AFGSEIKLASLNLAYNQIT-EIPANF---CGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDG 419 (636)
T ss_dssp CC-CCEEEEEESEEECCSSEEE-ECCTTS---EEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTT
T ss_pred hh-hhCCCCCCCEEECCCCccc-cccHhh---hhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcch
Confidence 88 8999999999999999998 556555 67788 999999999998 7888765532 269999999999999888
Q ss_pred cccc-------ccCCcceEecCCccceeccCccccCCCCCCEEEccCCcccccCCc-ccccc-------cccccccccCc
Q 041479 290 TEIG-------NLKNLIIIAIEKFILIRNIPISVGYLLKLQVLSLFENNISREIPS-SLGNF-------TFLTELNLCGN 354 (771)
Q Consensus 290 ~~~~-------~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l-------~~L~~L~Ls~N 354 (771)
..|. .+++|+.|++++|.+.+..+..+..+++|++|+|++|+++ .+|. .+..+ ++|++|+|++|
T Consensus 420 ~~l~~~~~~~~~~~~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N 498 (636)
T 4eco_A 420 KNFDPLDPTPFKGINVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFN 498 (636)
T ss_dssp CSSCTTCSSCCCCCCEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEECCSS
T ss_pred hhhcccccccccCCCCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccCCccEEECcCC
Confidence 8888 7889999999999997544444567899999999999998 4554 44333 28999999999
Q ss_pred cceecCCcccc--cccce-eeecccCcccCCCCcCCCCCCCCCeEEC------CCCcccccCCcchhhhhcccccccEEE
Q 041479 355 SIRGSVPSALG--SCHQL-WLDLSHNHLTGPIPLAVGNPKSIPHLDL------SKNELSGEIPSSLAWIFGYISIFAKLN 425 (771)
Q Consensus 355 ~l~~~~p~~~~--~l~~l-~L~Ls~N~l~~~~p~~~~~l~~L~~L~L------s~N~l~~~~p~~l~~~~~~l~~L~~L~ 425 (771)
+|+ .+|..+. .++.| .|+|++|++++ +|..+..+++|++|+| ++|++.+.+|..+. .+++|+.|+
T Consensus 499 ~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~----~l~~L~~L~ 572 (636)
T 4eco_A 499 KLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGIT----LCPSLTQLQ 572 (636)
T ss_dssp CCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGG----GCSSCCEEE
T ss_pred cCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHh----cCCCCCEEE
Confidence 999 6777776 88888 89999999997 7888889999999999 56788888898766 789999999
Q ss_pred CcCCCCCCCCCccccccccccccccCCCcccCC
Q 041479 426 LSYNNLDGDVPRKMIFKNASAISEAGNEKLCGG 458 (771)
Q Consensus 426 Ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~ 458 (771)
|++|++ +.+|..+. .++..+.+.+|+..|-.
T Consensus 573 Ls~N~l-~~ip~~~~-~~L~~L~Ls~N~l~~~~ 603 (636)
T 4eco_A 573 IGSNDI-RKVNEKIT-PNISVLDIKDNPNISID 603 (636)
T ss_dssp CCSSCC-CBCCSCCC-TTCCEEECCSCTTCEEE
T ss_pred CCCCcC-CccCHhHh-CcCCEEECcCCCCcccc
Confidence 999999 67887644 77888888999887743
No 3
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=3e-51 Score=486.14 Aligned_cols=428 Identities=20% Similarity=0.267 Sum_probs=343.3
Q ss_pred ccHHHHHHHHhcCCCCCCCCCCCCCCCC-----CC--ccc------------eeeeecCCCCcEEEEEcCCCCCcccCCc
Q 041479 2 PDKQALLAFKSKVDDDPFGALSTWNDSV-----NF--CQW------------LGVTCSLKYQRVILLNLSGQNLTGTASP 62 (771)
Q Consensus 2 ~~~~~l~~~~~~~~~~~~~~~~~w~~~~-----~~--c~w------------~~v~c~~~~~~l~~L~Ls~n~l~~~~~~ 62 (771)
+|++||++||+++. +| +|+.+. +| |+| .||+|+. .++|+.|+|++|+++|.+|+
T Consensus 269 ~d~~ALl~~k~~l~-~~-----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~-~~~V~~L~Ls~~~L~G~ip~ 341 (876)
T 4ecn_A 269 KDYKALKAIWEALD-GK-----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDN-NGRVTGLSLAGFGAKGRVPD 341 (876)
T ss_dssp HHHHHHHHHHHHTT-GG-----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECT-TSCEEEEECTTTCCEEEECG
T ss_pred HHHHHHHHHHHHcC-CC-----CCCcCCCcccccCCccccccccccccccCcCceEecC-CCCEEEEECccCCCCCcCch
Confidence 58999999999984 44 786543 56 999 9999986 48999999999999999999
Q ss_pred cccCCCCCcEEEc-CCCccccc----------------------------------------------------------
Q 041479 63 YIGNLTFLRLINL-QQNNFSSN---------------------------------------------------------- 83 (771)
Q Consensus 63 ~~~~l~~L~~L~L-s~N~l~~~---------------------------------------------------------- 83 (771)
+|+.|++|++|+| ++|.++|.
T Consensus 342 ~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~~~~ 421 (876)
T 4ecn_A 342 AIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKKDS 421 (876)
T ss_dssp GGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCCCCC
T ss_pred HHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCcccccccccc
Confidence 9999999999999 88766544
Q ss_pred ------------------CCccccCCCCCCEEecccCcCcc-cCCccc--ccCCcccccCCcccc--CCCCCCEEecccc
Q 041479 84 ------------------IPHEIGRLFRLRHIIFNSNALQG-QIPDSR--LILNKLEGNIPSELG--SLLKFKGLGLANN 140 (771)
Q Consensus 84 ------------------~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~--l~~n~l~~~~p~~~~--~l~~L~~L~Ls~N 140 (771)
+|.+|+++++|++|+|++|+|++ .+|..+ ...|.+++.+|..++ ++++|+.|+|++|
T Consensus 422 ~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N 501 (876)
T 4ecn_A 422 RISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNC 501 (876)
T ss_dssp CCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESC
T ss_pred ccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCC
Confidence 78899999999999999999987 233221 223556667888877 8999999999999
Q ss_pred cCcCCCC-------ccceeeecccc-ccc-ccCccccCCC-------CCCEEecccCcCcccCCh--hhhhCCCCCcEEE
Q 041479 141 YFTGPIP-------HLNMFQVSVYS-LTG-SIPIQLLNIT-------SMEYFHVSENQLVGELPP--HIGFTLPNVRILL 202 (771)
Q Consensus 141 ~l~~~lp-------~L~~l~l~~n~-l~~-~~p~~~~~l~-------~L~~L~Ls~N~l~g~lp~--~~~~~l~~L~~L~ 202 (771)
.+.+.+| .|+.|+++.|+ ++| .+|..+.+++ +|++|+|++|+++ .+|. .+. .+++|+.|+
T Consensus 502 ~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~-~L~~L~~L~ 579 (876)
T 4ecn_A 502 PNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQ-KMVKLGLLD 579 (876)
T ss_dssp TTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHT-TCTTCCEEE
T ss_pred CCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhh-cCCCCCEEE
Confidence 8876555 58889999998 888 7887666554 8999999999998 8888 565 888999999
Q ss_pred eecCcccccCCccccCCCCCCEEEccccccCCCCCcCcccccCCCC-CcEEEccCccccccCChhhhhcc-cccceeecc
Q 041479 203 LAGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTY-LEVVSLSVNSLSGTLPNSLANFS-SHLRYLYMS 280 (771)
Q Consensus 203 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~-L~~L~Ls~N~l~~~~p~~~~~l~-~~L~~L~Ls 280 (771)
|++|+|+ .+| .|..+++|+.|+|++|+++ .+|..+ .++++ |+.|+|++|+++ .+|..+.... ++|+.|+|+
T Consensus 580 Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~lp~~l---~~l~~~L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls 652 (876)
T 4ecn_A 580 CVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-EIPEDF---CAFTDQVEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFS 652 (876)
T ss_dssp CTTSCCC-BCC-CCCTTSEESEEECCSSCCS-CCCTTS---CEECTTCCEEECCSSCCC-SCCSCCCTTCSSCEEEEECC
T ss_pred CCCCCcc-cch-hhcCCCcceEEECcCCccc-cchHHH---hhccccCCEEECcCCCCC-cCchhhhccccCCCCEEECc
Confidence 9999998 677 8888999999999999988 566555 67787 999999999988 7887765543 248899999
Q ss_pred cCcCcccCcccc---c--ccCCcceEecCCccceeccCccc-cCCCCCCEEEccCCcccccCCccccc--------cccc
Q 041479 281 ANPISGSIPTEI---G--NLKNLIIIAIEKFILIRNIPISV-GYLLKLQVLSLFENNISREIPSSLGN--------FTFL 346 (771)
Q Consensus 281 ~N~l~~~~p~~~---~--~l~~L~~L~l~~n~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~~~~~--------l~~L 346 (771)
+|++++.+|... . .+.+|+.|++++|.+. .+|..+ ..+++|+.|+|++|+|+ .+|..+.. +++|
T Consensus 653 ~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L 730 (876)
T 4ecn_A 653 YNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQ-KFPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLL 730 (876)
T ss_dssp SSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCC-SCCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGC
T ss_pred CCcCCCccccchhhhccccCCCcCEEEccCCcCC-ccCHHHHccCCCCCEEECCCCcCC-ccChHHhccccccccccCCc
Confidence 999987666432 2 3458889999998887 455544 47889999999999998 55554433 2389
Q ss_pred ccccccCccceecCCcccc--cccce-eeecccCcccCCCCcCCCCCCCCCeEECCC------CcccccCCcchhhhhcc
Q 041479 347 TELNLCGNSIRGSVPSALG--SCHQL-WLDLSHNHLTGPIPLAVGNPKSIPHLDLSK------NELSGEIPSSLAWIFGY 417 (771)
Q Consensus 347 ~~L~Ls~N~l~~~~p~~~~--~l~~l-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~------N~l~~~~p~~l~~~~~~ 417 (771)
+.|+|++|+|+ .+|..+. .++.| .|+|++|++++ +|..+..+++|+.|+|++ |++.+.+|..+. .
T Consensus 731 ~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~----~ 804 (876)
T 4ecn_A 731 TTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGIT----T 804 (876)
T ss_dssp CEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGG----G
T ss_pred cEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHh----c
Confidence 99999999998 6777776 78888 89999999987 688888899999999876 778888888765 7
Q ss_pred cccccEEECcCCCCCCCCCccccccccccccccCCCcc
Q 041479 418 ISIFAKLNLSYNNLDGDVPRKMIFKNASAISEAGNEKL 455 (771)
Q Consensus 418 l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~~~~n~~l 455 (771)
+++|+.|+|++|++ +.+|..+ ..++..+.+.+|+..
T Consensus 805 L~~L~~L~Ls~N~L-~~Ip~~l-~~~L~~LdLs~N~l~ 840 (876)
T 4ecn_A 805 CPSLIQLQIGSNDI-RKVDEKL-TPQLYILDIADNPNI 840 (876)
T ss_dssp CSSCCEEECCSSCC-CBCCSCC-CSSSCEEECCSCTTC
T ss_pred CCCCCEEECCCCCC-CccCHhh-cCCCCEEECCCCCCC
Confidence 88999999999999 6788764 367777788888754
No 4
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=2.2e-48 Score=464.25 Aligned_cols=379 Identities=32% Similarity=0.505 Sum_probs=339.5
Q ss_pred CCCcEEEEEcCCCCCcccCCccccCC-CCCcEEEcCCCcccccCCccccCCCCCCEEecccCcCcccCCcc---------
Q 041479 42 KYQRVILLNLSGQNLTGTASPYIGNL-TFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNALQGQIPDS--------- 111 (771)
Q Consensus 42 ~~~~l~~L~Ls~n~l~~~~~~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~--------- 111 (771)
...+++.|+|++|++++.+|..+..+ ++|++|+|++|++++.+|..|+++++|++|+|++|.++|.+|..
T Consensus 267 ~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~ip~~~l~~l~~L~ 346 (768)
T 3rgz_A 267 PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLK 346 (768)
T ss_dssp CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEEECCHHHHTTCTTCC
T ss_pred ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccCcCCHHHHhcCCCCC
Confidence 34678888888888888888887765 99999999999999889999999999999999999998877753
Q ss_pred --cccCCcccccCCccccCCC-CCCEEecccccCcCC---------CCccceeeecccccccccCccccCCCCCCEEecc
Q 041479 112 --RLILNKLEGNIPSELGSLL-KFKGLGLANNYFTGP---------IPHLNMFQVSVYSLTGSIPIQLLNITSMEYFHVS 179 (771)
Q Consensus 112 --~l~~n~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~---------lp~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls 179 (771)
.+..|.+++.+|..+.+++ +|+.|++++|++++. .+.|+.|+++.|.+++.+|..+.++++|++|+++
T Consensus 347 ~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls 426 (768)
T 3rgz_A 347 VLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLS 426 (768)
T ss_dssp EEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCGGGGGCTTCCEEECC
T ss_pred EEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCHHHhcCCCCCEEECc
Confidence 2667888889999998887 899999999998753 4569999999999999999999999999999999
Q ss_pred cCcCcccCChhhhhCCCCCcEEEeecCcccccCCccccCCCCCCEEEccccccCCCCCcCcccccCCCCCcEEEccCccc
Q 041479 180 ENQLVGELPPHIGFTLPNVRILLLAGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSL 259 (771)
Q Consensus 180 ~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l 259 (771)
+|++++.+|..+. .+++|+.|++++|++++.+|..|..+++|++|+|++|++++.+|..+ .++++|++|+|++|++
T Consensus 427 ~N~l~~~~p~~l~-~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l---~~l~~L~~L~L~~N~l 502 (768)
T 3rgz_A 427 FNYLSGTIPSSLG-SLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGL---SNCTNLNWISLSNNRL 502 (768)
T ss_dssp SSEEESCCCGGGG-GCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGG---GGCTTCCEEECCSSCC
T ss_pred CCcccCcccHHHh-cCCCCCEEECCCCcccCcCCHHHcCCCCceEEEecCCcccCcCCHHH---hcCCCCCEEEccCCcc
Confidence 9999988888876 89999999999999999999999999999999999999999988877 7889999999999999
Q ss_pred cccCChhhhhcccccceeecccCcCcccCcccccccCCcceEecCCccceeccCccc-----------------------
Q 041479 260 SGTLPNSLANFSSHLRYLYMSANPISGSIPTEIGNLKNLIIIAIEKFILIRNIPISV----------------------- 316 (771)
Q Consensus 260 ~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~----------------------- 316 (771)
++.+|..+..+. +|++|++++|++++.+|..++++++|+.|++++|.+.+.+|..+
T Consensus 503 ~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~ 581 (768)
T 3rgz_A 503 TGEIPKWIGRLE-NLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKND 581 (768)
T ss_dssp CSCCCGGGGGCT-TCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECC
T ss_pred CCcCChHHhcCC-CCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccccccccccccc
Confidence 999999999886 79999999999999999999999999999999999987777543
Q ss_pred -----------------------------------------------cCCCCCCEEEccCCcccccCCcccccccccccc
Q 041479 317 -----------------------------------------------GYLLKLQVLSLFENNISREIPSSLGNFTFLTEL 349 (771)
Q Consensus 317 -----------------------------------------------~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 349 (771)
..+++|+.|||++|++++.+|..++.+++|+.|
T Consensus 582 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L 661 (768)
T 3rgz_A 582 GMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFIL 661 (768)
T ss_dssp SCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEE
T ss_pred cccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEE
Confidence 335789999999999999999999999999999
Q ss_pred cccCccceecCCcccccccce-eeecccCcccCCCCcCCCCCCCCCeEECCCCcccccCCcchhhhhcccccccEEECcC
Q 041479 350 NLCGNSIRGSVPSALGSCHQL-WLDLSHNHLTGPIPLAVGNPKSIPHLDLSKNELSGEIPSSLAWIFGYISIFAKLNLSY 428 (771)
Q Consensus 350 ~Ls~N~l~~~~p~~~~~l~~l-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~l~~L~~L~Ls~ 428 (771)
+|++|+++|.+|..++.++.| .|||++|+++|.+|..++.+++|++|||++|+++|.+|..- .+..+....+.+
T Consensus 662 ~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~-----~~~~~~~~~~~g 736 (768)
T 3rgz_A 662 NLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMG-----QFETFPPAKFLN 736 (768)
T ss_dssp ECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSS-----SGGGSCGGGGCS
T ss_pred eCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCch-----hhccCCHHHhcC
Confidence 999999999999999999999 99999999999999999999999999999999999999752 334444455667
Q ss_pred CC
Q 041479 429 NN 430 (771)
Q Consensus 429 N~ 430 (771)
|+
T Consensus 737 N~ 738 (768)
T 3rgz_A 737 NP 738 (768)
T ss_dssp CT
T ss_pred Cc
Confidence 75
No 5
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=1.4e-45 Score=429.61 Aligned_cols=404 Identities=20% Similarity=0.168 Sum_probs=304.7
Q ss_pred CcEEEEEcCCCCCcccCCccccCCCCCcEEEcCCCcccccCCccccCCCCCCEEecccCcCcccCCc----------ccc
Q 041479 44 QRVILLNLSGQNLTGTASPYIGNLTFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNALQGQIPD----------SRL 113 (771)
Q Consensus 44 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~----------~~l 113 (771)
.+++.|+|++|+++++.|.+|.++++|++|+|++|++++..|.+|+++++|++|+|++|++++..|. ..+
T Consensus 57 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L 136 (606)
T 3t6q_A 57 INLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYL 136 (606)
T ss_dssp TTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEEC
T ss_pred ccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeeccccCcccCCcchhccCCcccEEEC
Confidence 5677777777777766666777777777777777777766666677777777777777766652111 123
Q ss_pred cCCcccccCCccccCCCCCCEEecccccCcC-------CCCc--------------------------------------
Q 041479 114 ILNKLEGNIPSELGSLLKFKGLGLANNYFTG-------PIPH-------------------------------------- 148 (771)
Q Consensus 114 ~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-------~lp~-------------------------------------- 148 (771)
..|.+++..+..+..+++|+.|++++|++++ .++.
T Consensus 137 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l~~~~~~~~~~~~L~~L~l~~~~~~~ 216 (606)
T 3t6q_A 137 GSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDIAGIEPGAFDSAVFQSLNFGGTQNLL 216 (606)
T ss_dssp CSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCCCEECTTTTTTCEEEEEECTTCSCHH
T ss_pred CCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCccCccChhHhhhccccccccCCchhHH
Confidence 4445544332333335555555555555542 1222
Q ss_pred ---------------------------------------cceeeecccccccccCccccCCCCCCEEecccCcCcccCCh
Q 041479 149 ---------------------------------------LNMFQVSVYSLTGSIPIQLLNITSMEYFHVSENQLVGELPP 189 (771)
Q Consensus 149 ---------------------------------------L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~ 189 (771)
++.++++.|.+++..+..|.++++|++|++++|+++ .+|+
T Consensus 217 ~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~-~lp~ 295 (606)
T 3t6q_A 217 VIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLS-ELPS 295 (606)
T ss_dssp HHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCS-CCCS
T ss_pred HHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccC-CCCh
Confidence 334445555555555555777788888888888887 7887
Q ss_pred hhhhCCCCCcEEEeecCcccccCCccccCCCCCCEEEccccccCCCCCcCcccccCCCCCcEEEccCccccccC--Chhh
Q 041479 190 HIGFTLPNVRILLLAGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSLSGTL--PNSL 267 (771)
Q Consensus 190 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~--p~~~ 267 (771)
.+. .+++|++|++++|++++..|..+..+++|++|++++|.+.+.+|.. .+..+++|++|++++|.+++.. |..+
T Consensus 296 ~l~-~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 372 (606)
T 3t6q_A 296 GLV-GLSTLKKLVLSANKFENLCQISASNFPSLTHLSIKGNTKRLELGTG--CLENLENLRELDLSHDDIETSDCCNLQL 372 (606)
T ss_dssp SCC-SCTTCCEEECTTCCCSBGGGGCGGGCTTCSEEECCSCSSCCBCCSS--TTTTCTTCCEEECCSSCCCEEEESTTTT
T ss_pred hhc-ccccCCEEECccCCcCcCchhhhhccCcCCEEECCCCCcccccchh--hhhccCcCCEEECCCCccccccCcchhc
Confidence 765 7888888888888888777788888888888888888887655542 2377888999999999988654 6677
Q ss_pred hhcccccceeecccCcCcccCcccccccCCcceEecCCccceeccCcc-ccCCCCCCEEEccCCcccccCCccccccccc
Q 041479 268 ANFSSHLRYLYMSANPISGSIPTEIGNLKNLIIIAIEKFILIRNIPIS-VGYLLKLQVLSLFENNISREIPSSLGNFTFL 346 (771)
Q Consensus 268 ~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 346 (771)
..+. +|++|++++|++++..|..|..+++|+.|++++|.+.+..|.. +..+++|++|++++|++++..|..+..+++|
T Consensus 373 ~~l~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L 451 (606)
T 3t6q_A 373 RNLS-HLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPAL 451 (606)
T ss_dssp TTCT-TCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTC
T ss_pred ccCC-CCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCC
Confidence 7775 7999999999999888889999999999999999988776654 8889999999999999988888889999999
Q ss_pred ccccccCccceec---CCcccccccce-eeecccCcccCCCCcCCCCCCCCCeEECCCCcccccCCcchhhhhccccccc
Q 041479 347 TELNLCGNSIRGS---VPSALGSCHQL-WLDLSHNHLTGPIPLAVGNPKSIPHLDLSKNELSGEIPSSLAWIFGYISIFA 422 (771)
Q Consensus 347 ~~L~Ls~N~l~~~---~p~~~~~l~~l-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~l~~L~ 422 (771)
++|++++|++++. .+..+..++.| .|++++|++++..|..|..+++|++|+|++|++++..|..+. .++.|
T Consensus 452 ~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~----~l~~L- 526 (606)
T 3t6q_A 452 QHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALS----HLKGI- 526 (606)
T ss_dssp CEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGT----TCCSC-
T ss_pred CEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhC----ccccc-
Confidence 9999999999862 33568888888 899999999988899999999999999999999988887765 88889
Q ss_pred EEECcCCCCCCCCCccc-cccccccccccCCCcccC
Q 041479 423 KLNLSYNNLDGDVPRKM-IFKNASAISEAGNEKLCG 457 (771)
Q Consensus 423 ~L~Ls~N~l~~~~p~~~-~~~~~~~~~~~~n~~lc~ 457 (771)
.|+|++|++++.+|..+ ...++..+.+.+|++.|.
T Consensus 527 ~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 562 (606)
T 3t6q_A 527 YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCT 562 (606)
T ss_dssp EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECS
T ss_pred EEECcCCcccccCHhhcccCCCCCEEeCCCCCcccc
Confidence 99999999997776643 356778889999998884
No 6
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=9.4e-47 Score=395.24 Aligned_cols=237 Identities=24% Similarity=0.302 Sum_probs=194.3
Q ss_pred cccccccccccccceEEEEEecC-----CCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCce
Q 041479 522 DLLLNVSYESLVKATVYKGILDL-----DQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNY 596 (771)
Q Consensus 522 ~~~~~~~l~~~~~~~Vy~~~~~~-----~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~ 596 (771)
+......+|+|.||+||+|++.. +++.||||+++.......++|.+|+++|++++|||||+++|+|.+.+
T Consensus 14 ~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~----- 88 (299)
T 4asz_A 14 NIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGD----- 88 (299)
T ss_dssp GEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS-----
T ss_pred HeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCC-----
Confidence 34445679999999999999753 46789999998766667789999999999999999999999998876
Q ss_pred eEEEEEEeccCCCCCCCc----------------ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCC
Q 041479 597 FRALVYEFMHHGSLESCP----------------RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDM 660 (771)
Q Consensus 597 ~~~lv~e~~~~g~L~~~~----------------~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~ 660 (771)
..|+|||||++|+|.++. ..++|.++.+|+.|+|+||+|||+. +|+||||||+|||+++++
T Consensus 89 ~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~ 165 (299)
T 4asz_A 89 PLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENL 165 (299)
T ss_dssp SEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGG
T ss_pred EEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCC
Confidence 689999999999997762 3589999999999999999999985 899999999999999999
Q ss_pred ceEEecccCccccCcccCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHH
Q 041479 661 TAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHN 724 (771)
Q Consensus 661 ~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~ 724 (771)
.+||+|||+|+....... .......+||+.||||| |||++|||+| |+.||.+... ..+..
T Consensus 166 ~~Ki~DFGla~~~~~~~~--~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~--~~~~~ 241 (299)
T 4asz_A 166 LVKIGDFGMSRDVYSTDY--YRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN--NEVIE 241 (299)
T ss_dssp CEEECCCSCHHHHTGGGC--EEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCH--HHHHH
T ss_pred cEEECCcccceecCCCCc--eeecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH--HHHHH
Confidence 999999999986654332 12223456999999999 7999999999 9999976432 22334
Q ss_pred HHHhhCCCchhhhcCccccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 725 FVKMALPDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 725 ~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
.+........++.+++.+..++.+||+.||++||||.||++.|+++
T Consensus 242 ~i~~~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~ 287 (299)
T 4asz_A 242 CITQGRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNL 287 (299)
T ss_dssp HHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHcCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 4444433444556677777788899999999999999999999875
No 7
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=1.2e-46 Score=400.06 Aligned_cols=238 Identities=23% Similarity=0.338 Sum_probs=190.2
Q ss_pred ccccccccccccccceEEEEEecC-----CCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCc
Q 041479 521 KDLLLNVSYESLVKATVYKGILDL-----DQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGN 595 (771)
Q Consensus 521 ~~~~~~~~l~~~~~~~Vy~~~~~~-----~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~ 595 (771)
.+......+|+|.||+||+|+++. +++.||||+++.......++|.+|+++|++++|||||+++|+|.+.+
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~---- 116 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGR---- 116 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS----
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC----
Confidence 344455679999999999999763 56799999998776677789999999999999999999999998876
Q ss_pred eeEEEEEEeccCCCCCCC------------------cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeC
Q 041479 596 YFRALVYEFMHHGSLESC------------------PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD 657 (771)
Q Consensus 596 ~~~~lv~e~~~~g~L~~~------------------~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~ 657 (771)
..|||||||++|+|.++ ...++|.++..|+.|||+||+|||+. +||||||||+|||++
T Consensus 117 -~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~ 192 (329)
T 4aoj_A 117 -PLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVG 192 (329)
T ss_dssp -SEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEE
T ss_pred -EEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEEC
Confidence 68999999999999764 13589999999999999999999985 899999999999999
Q ss_pred CCCceEEecccCccccCcccCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCcc
Q 041479 658 NDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLD 721 (771)
Q Consensus 658 ~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~ 721 (771)
+++.+||+|||+|+....... .......+||+.||||| |||++|||+| |+.||.+... ..
T Consensus 193 ~~~~~Ki~DFGla~~~~~~~~--~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~--~~ 268 (329)
T 4aoj_A 193 QGLVVKIGDFGMSRDIYSTDY--YRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSN--TE 268 (329)
T ss_dssp TTTEEEECCCC------------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCH--HH
T ss_pred CCCcEEEcccccceeccCCCc--ceecCcccccccccChhhhcCCCCCccccccchHHHHHHHHcCCCCCCCCCCH--HH
Confidence 999999999999987644322 12223457999999999 7999999999 8999976432 23
Q ss_pred HHHHHHhhCCCchhhhcCccccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 722 LHNFVKMALPDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 722 ~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
+.+.+....+...++.+++.+..++.+||+.||++||||.||++.|+.+
T Consensus 269 ~~~~i~~g~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l 317 (329)
T 4aoj_A 269 AIDCITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQAL 317 (329)
T ss_dssp HHHHHHHTCCCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHH
T ss_pred HHHHHHcCCCCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHH
Confidence 3444444444455666777787888899999999999999999999876
No 8
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=5.2e-45 Score=424.79 Aligned_cols=411 Identities=18% Similarity=0.165 Sum_probs=331.5
Q ss_pred ceeeeecCC---------CCcEEEEEcCCCCCcccCCccccCCCCCcEEEcCCCcccccCCccccCCCCCCEEecccCcC
Q 041479 34 WLGVTCSLK---------YQRVILLNLSGQNLTGTASPYIGNLTFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNAL 104 (771)
Q Consensus 34 w~~v~c~~~---------~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 104 (771)
+..+.|... ..+++.|||++|+++++.|..|+++++|++|+|++|++++..|.+|+++++|++|+|++|++
T Consensus 14 ~~~~~c~~~~l~~iP~~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l 93 (606)
T 3t6q_A 14 NKTYNCENLGLNEIPGTLPNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPL 93 (606)
T ss_dssp TTEEECTTSCCSSCCTTSCTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred CceEECCCCCcccCcCCCCCcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcc
Confidence 445777533 25799999999999999899999999999999999999998999999999999999999999
Q ss_pred cccCCccc----------ccCCcccccCCccccCCCCCCEEecccccCcCC-------CCccceeeecccccccccCccc
Q 041479 105 QGQIPDSR----------LILNKLEGNIPSELGSLLKFKGLGLANNYFTGP-------IPHLNMFQVSVYSLTGSIPIQL 167 (771)
Q Consensus 105 ~~~~p~~~----------l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-------lp~L~~l~l~~n~l~~~~p~~~ 167 (771)
++..|..+ +..|.+++..|..|+++++|++|++++|++++. ++.|+.|++++|.+++..|..+
T Consensus 94 ~~~~~~~~~~l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~ 173 (606)
T 3t6q_A 94 IFMAETALSGPKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDM 173 (606)
T ss_dssp SEECTTTTSSCTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHH
T ss_pred cccChhhhcccccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhh
Confidence 87666432 667888877788899999999999999999852 3569999999999998888889
Q ss_pred cCCCCCC--EEecccCcCcccCChhhhhC-------------------------------------------------C-
Q 041479 168 LNITSME--YFHVSENQLVGELPPHIGFT-------------------------------------------------L- 195 (771)
Q Consensus 168 ~~l~~L~--~L~Ls~N~l~g~lp~~~~~~-------------------------------------------------l- 195 (771)
..+++|+ .|++++|.+++..| ..+.. +
T Consensus 174 ~~l~~L~~l~L~l~~n~l~~~~~-~~~~~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~ 252 (606)
T 3t6q_A 174 SSLQQATNLSLNLNGNDIAGIEP-GAFDSAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLC 252 (606)
T ss_dssp HTTTTCCSEEEECTTCCCCEECT-TTTTTCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGG
T ss_pred hhhcccceeEEecCCCccCccCh-hHhhhccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhh
Confidence 9999999 89999999985433 33211 0
Q ss_pred -CCCcEEEeecCcccccCCccccCCCCCCEEEccccccCCCCCcCcccccCCCCCcEEEccCccccccCChhhhhccccc
Q 041479 196 -PNVRILLLAGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSLSGTLPNSLANFSSHL 274 (771)
Q Consensus 196 -~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L 274 (771)
.+|+.|++++|++++..+..|..+++|++|++++|+++. +|..+ .++++|++|++++|++++..|..+..++ +|
T Consensus 253 ~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~-lp~~l---~~l~~L~~L~l~~n~l~~~~~~~~~~l~-~L 327 (606)
T 3t6q_A 253 EMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLSE-LPSGL---VGLSTLKKLVLSANKFENLCQISASNFP-SL 327 (606)
T ss_dssp GSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCSC-CCSSC---CSCTTCCEEECTTCCCSBGGGGCGGGCT-TC
T ss_pred cCceeEEEeecCccCccCHHHhccccCCCEEeccCCccCC-CChhh---cccccCCEEECccCCcCcCchhhhhccC-cC
Confidence 167788888888888778888889999999999999884 45555 7778899999999998876677777775 78
Q ss_pred ceeecccCcCcccCcc-cccccCCcceEecCCccceecc--CccccCCCCCCEEEccCCcccccCCcccccccccccccc
Q 041479 275 RYLYMSANPISGSIPT-EIGNLKNLIIIAIEKFILIRNI--PISVGYLLKLQVLSLFENNISREIPSSLGNFTFLTELNL 351 (771)
Q Consensus 275 ~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~l~~n~l~~~~--p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 351 (771)
++|++++|.+.+.+|. .|..+++|+.|++++|.+.+.. |..+..+++|++|++++|++++..|..|..+++|++|++
T Consensus 328 ~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 407 (606)
T 3t6q_A 328 THLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDL 407 (606)
T ss_dssp SEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEEC
T ss_pred CEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEEC
Confidence 8999998888866654 4888888888888888887665 777888888888888888888888888888888888888
Q ss_pred cCccceecCCc-ccccccce-eeecccCcccCCCCcCCCCCCCCCeEECCCCccccc-CC--cchhhhhcccccccEEEC
Q 041479 352 CGNSIRGSVPS-ALGSCHQL-WLDLSHNHLTGPIPLAVGNPKSIPHLDLSKNELSGE-IP--SSLAWIFGYISIFAKLNL 426 (771)
Q Consensus 352 s~N~l~~~~p~-~~~~l~~l-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p--~~l~~~~~~l~~L~~L~L 426 (771)
++|++++..|. .+..++.| .|++++|.+++..|..|..+++|++|++++|++++. +| .. +..+++|+.|+|
T Consensus 408 ~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~----~~~l~~L~~L~L 483 (606)
T 3t6q_A 408 AFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNS----LQTLGRLEILVL 483 (606)
T ss_dssp TTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCG----GGGCTTCCEEEC
T ss_pred CCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchh----hccCCCccEEEC
Confidence 88888876554 47788888 888888888888888888888888888888888762 22 33 337788888888
Q ss_pred cCCCCCCCCCccc-cccccccccccCCCc
Q 041479 427 SYNNLDGDVPRKM-IFKNASAISEAGNEK 454 (771)
Q Consensus 427 s~N~l~~~~p~~~-~~~~~~~~~~~~n~~ 454 (771)
++|++++..|..+ ...++..+.+.+|..
T Consensus 484 s~n~l~~~~~~~~~~l~~L~~L~Ls~N~l 512 (606)
T 3t6q_A 484 SFCDLSSIDQHAFTSLKMMNHVDLSHNRL 512 (606)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred CCCccCccChhhhccccCCCEEECCCCcc
Confidence 8888887666543 245566666666643
No 9
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=4.3e-45 Score=440.36 Aligned_cols=412 Identities=20% Similarity=0.194 Sum_probs=289.3
Q ss_pred ccceeeeecCCCCcEEEEEcCCCCCcccCCccccCCCCCcEEEcCCCcccccC-CccccCCCCCCEEecccCcCcccCCc
Q 041479 32 CQWLGVTCSLKYQRVILLNLSGQNLTGTASPYIGNLTFLRLINLQQNNFSSNI-PHEIGRLFRLRHIIFNSNALQGQIPD 110 (771)
Q Consensus 32 c~w~~v~c~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~ 110 (771)
|+|..|-+ ...+++.|||++|.++++.|..|.++++|++|+|++|.+.+.+ |.+|+++++|++|+|++|.+++..|.
T Consensus 14 ~~L~~vP~--lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~ 91 (844)
T 3j0a_A 14 CNLTQVPQ--VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPD 91 (844)
T ss_dssp CCSSCCCS--SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTT
T ss_pred CCCCCCCC--CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHh
Confidence 35666655 3367777777777777766666666666666666666443333 55666666666666666666654443
Q ss_pred cc----------ccCCcccccCCcc--ccCCCCCCEEecccccCcCC--------CCccceeeecccccccccC------
Q 041479 111 SR----------LILNKLEGNIPSE--LGSLLKFKGLGLANNYFTGP--------IPHLNMFQVSVYSLTGSIP------ 164 (771)
Q Consensus 111 ~~----------l~~n~l~~~~p~~--~~~l~~L~~L~Ls~N~l~~~--------lp~L~~l~l~~n~l~~~~p------ 164 (771)
.+ +..|.+++.+|.. |+++++|+.|+|++|++++. +++|+.|+++.|.+++..|
T Consensus 92 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l 171 (844)
T 3j0a_A 92 AFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPL 171 (844)
T ss_dssp SSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHH
T ss_pred HccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccc
Confidence 22 3444555444433 55555555555555555421 2335555555555544444
Q ss_pred --------------------ccccCCCC------CCEEecccCcCcccCChhhhhC------------------------
Q 041479 165 --------------------IQLLNITS------MEYFHVSENQLVGELPPHIGFT------------------------ 194 (771)
Q Consensus 165 --------------------~~~~~l~~------L~~L~Ls~N~l~g~lp~~~~~~------------------------ 194 (771)
..+..+.+ |+.|++++|.+++.+|..+...
T Consensus 172 ~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~ 251 (844)
T 3j0a_A 172 QGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHN 251 (844)
T ss_dssp HHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSS
T ss_pred cCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccc
Confidence 33333333 6777777776665555433211
Q ss_pred -------------CCCCcEEEeecCcccccCCccccCCCCCCEEEccccccCCCCCcCcccccCCCCCcEEEccCccccc
Q 041479 195 -------------LPNVRILLLAGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSLSG 261 (771)
Q Consensus 195 -------------l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~ 261 (771)
.++|+.|+|++|.+.+..|..|..+++|+.|+|++|++++..|..| .++++|++|+|++|++++
T Consensus 252 l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~---~~l~~L~~L~Ls~N~l~~ 328 (844)
T 3j0a_A 252 IKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAF---YGLDNLQVLNLSYNLLGE 328 (844)
T ss_dssp STTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTT---TTCSSCCEEEEESCCCSC
T ss_pred cCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHh---cCCCCCCEEECCCCCCCc
Confidence 2578888888888888888888888888888888888888777666 677888888888888886
Q ss_pred cCChhhhhcccccceeecccCcCcccCcccccccCCcceEecCCccceecc------------------Cc---------
Q 041479 262 TLPNSLANFSSHLRYLYMSANPISGSIPTEIGNLKNLIIIAIEKFILIRNI------------------PI--------- 314 (771)
Q Consensus 262 ~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~------------------p~--------- 314 (771)
..|..+..++ +|++|++++|+|++..+..|.++++|+.|++++|.+.+.. |.
T Consensus 329 ~~~~~~~~l~-~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~L~~L~l~~N~l~~l~~~~~~l~~L~ 407 (844)
T 3j0a_A 329 LYSSNFYGLP-KVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIH 407 (844)
T ss_dssp CCSCSCSSCT-TCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCSSCCSCSEEEEESCCCCCCCCCCTTCCEEE
T ss_pred cCHHHhcCCC-CCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCcccCCCCcchhccCCCCcccccccccccceee
Confidence 6677777775 7888888888888777778888888888888888765321 10
Q ss_pred -------------cccCCCCCCEEEccCCcccccCCc-ccccccccccccccCccce-----ecCCcccccccce-eeec
Q 041479 315 -------------SVGYLLKLQVLSLFENNISREIPS-SLGNFTFLTELNLCGNSIR-----GSVPSALGSCHQL-WLDL 374 (771)
Q Consensus 315 -------------~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~-----~~~p~~~~~l~~l-~L~L 374 (771)
.+..+++|+.|+|++|++++..+. .+..+++|+.|+|++|.++ +..+..|..++.| .|+|
T Consensus 408 ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~L 487 (844)
T 3j0a_A 408 LSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYL 487 (844)
T ss_dssp CCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCC
T ss_pred cccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEEC
Confidence 123567777777777777654333 3556778888888888886 3445668888888 8999
Q ss_pred ccCcccCCCCcCCCCCCCCCeEECCCCcccccCCcchhhhhcccccccEEECcCCCCCCCCCccccccccccccccCCCc
Q 041479 375 SHNHLTGPIPLAVGNPKSIPHLDLSKNELSGEIPSSLAWIFGYISIFAKLNLSYNNLDGDVPRKMIFKNASAISEAGNEK 454 (771)
Q Consensus 375 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~~~~n~~ 454 (771)
++|+|++.+|..|..+++|+.|+|++|+|++..|..+. ++|+.|||++|+|++..|.. +.++..+.+.+||+
T Consensus 488 s~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~------~~L~~L~Ls~N~l~~~~~~~--~~~L~~l~l~~Np~ 559 (844)
T 3j0a_A 488 NHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLP------ANLEILDISRNQLLAPNPDV--FVSLSVLDITHNKF 559 (844)
T ss_dssp CHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCC------SCCCEEEEEEECCCCCCSCC--CSSCCEEEEEEECC
T ss_pred CCCcccccChhHccchhhhheeECCCCCCCccChhhhh------ccccEEECCCCcCCCCChhH--hCCcCEEEecCCCc
Confidence 99999999999999999999999999999976666532 78999999999999988865 45788889999999
Q ss_pred ccC
Q 041479 455 LCG 457 (771)
Q Consensus 455 lc~ 457 (771)
.|+
T Consensus 560 ~C~ 562 (844)
T 3j0a_A 560 ICE 562 (844)
T ss_dssp CCS
T ss_pred ccc
Confidence 984
No 10
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=3.6e-46 Score=390.76 Aligned_cols=234 Identities=25% Similarity=0.345 Sum_probs=183.6
Q ss_pred cccccccccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEE
Q 041479 522 DLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRA 599 (771)
Q Consensus 522 ~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 599 (771)
+......+|+|++|+||+|+++. .||||+++... ....++|.+|++++++++|||||+++|++.+. ..|
T Consensus 37 ~l~l~~~iG~G~fG~Vy~~~~~~---~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~------~~~ 107 (307)
T 3omv_A 37 EVMLSTRIGSGSFGTVYKGKWHG---DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKD------NLA 107 (307)
T ss_dssp SCCEEEECCCCSSSEEEEEESSS---EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS------SCE
T ss_pred HeEEeeEEeeCCCcEEEEEEECC---cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEECC------eEE
Confidence 33445568999999999998753 59999996543 44567899999999999999999999998654 368
Q ss_pred EEEEeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCc
Q 041479 600 LVYEFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPE 675 (771)
Q Consensus 600 lv~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~ 675 (771)
||||||++|+|.++ ...++|.++..|+.|||+||+|||+. +||||||||+|||+++++.+||+|||+|+....
T Consensus 108 iVmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~ 184 (307)
T 3omv_A 108 IVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSR 184 (307)
T ss_dssp EEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCSSCBC---
T ss_pred EEEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeeccCceeccc
Confidence 99999999999775 34689999999999999999999985 899999999999999999999999999987644
Q ss_pred ccCCcccccccccccccccchh------------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCC-C---c
Q 041479 676 VMSSNQCSSVGLKGTVGYATPE------------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALP-D---Q 733 (771)
Q Consensus 676 ~~~~~~~~~~~~~gt~~y~aPE------------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~-~---~ 733 (771)
... .......+||+.||||| |||++|||+||+.||.+..... .+...+..... + .
T Consensus 185 ~~~--~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~-~~~~~~~~~~~~p~~~~ 261 (307)
T 3omv_A 185 WSG--SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRD-QIIFMVGRGYASPDLSK 261 (307)
T ss_dssp -----------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHH-HHHHHHHTTCCCCCSTT
T ss_pred CCc--ceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHH-HHHHHHhcCCCCCCccc
Confidence 322 12233467999999999 7999999999999997643222 23333333322 2 2
Q ss_pred hhhhcCccccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 734 ILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 734 ~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
....+++.+..++.+||+.||++||||.||++.|+.+
T Consensus 262 ~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l 298 (307)
T 3omv_A 262 LYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELL 298 (307)
T ss_dssp SCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHH
T ss_pred ccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence 3344556666777899999999999999999998754
No 11
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=4.8e-46 Score=391.57 Aligned_cols=233 Identities=20% Similarity=0.244 Sum_probs=190.7
Q ss_pred cccccccccceEEEEEec-----CCCeEEEEEEeeccc-hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEE
Q 041479 526 NVSYESLVKATVYKGILD-----LDQTFIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRA 599 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~-----~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 599 (771)
...+|+|.||+||+|++. .+++.||||+++... ....++|.+|+.++++++|||||+++|+|.+.+ ..+
T Consensus 31 ~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~-----~~~ 105 (308)
T 4gt4_A 31 MEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQ-----PLS 105 (308)
T ss_dssp EEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-----SCE
T ss_pred eeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECC-----EEE
Confidence 346999999999999974 356799999996543 344678999999999999999999999998776 579
Q ss_pred EEEEeccCCCCCCCc-------------------ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCC
Q 041479 600 LVYEFMHHGSLESCP-------------------RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDM 660 (771)
Q Consensus 600 lv~e~~~~g~L~~~~-------------------~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~ 660 (771)
+|||||++|+|.++. ..++|.++.+|+.|||+||+|||+. +||||||||+|||+++++
T Consensus 106 lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~~~~ 182 (308)
T 4gt4_A 106 MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKL 182 (308)
T ss_dssp EEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGG
T ss_pred EEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEECCCC
Confidence 999999999997652 3589999999999999999999996 899999999999999999
Q ss_pred ceEEecccCccccCcccCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHH
Q 041479 661 TAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHN 724 (771)
Q Consensus 661 ~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~ 724 (771)
.+||+|||+|+....... .......+||+.||||| |||++|||+| |+.||.+... ..+.+
T Consensus 183 ~~Ki~DFGlar~~~~~~~--~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~--~~~~~ 258 (308)
T 4gt4_A 183 NVKISDLGLFREVYAADY--YKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN--QDVVE 258 (308)
T ss_dssp CEEECCSCCBCGGGGGGC--BCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCH--HHHHH
T ss_pred CEEECCcccceeccCCCc--eeEecccccCCcccCHHHHhCCCCCccchhhhHHHHHHHHHhCCCCCCCCCCH--HHHHH
Confidence 999999999987654332 12233457999999999 7999999999 8999976432 23444
Q ss_pred HHHhhCCCchhhhcCccccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 725 FVKMALPDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 725 ~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
.+......+.++.+++.+..++.+||+.||++||||.||++.|+.+
T Consensus 259 ~i~~~~~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 259 MIRNRQVLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp HHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred HHHcCCCCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 4444444445556677777788899999999999999999999864
No 12
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=1.3e-44 Score=421.45 Aligned_cols=404 Identities=20% Similarity=0.181 Sum_probs=300.2
Q ss_pred CcEEEEEcCCCCCcccCCccccCCCCCcEEEcCCCcccccCCccccCCCCCCEEecccCcCcccCCccc----------c
Q 041479 44 QRVILLNLSGQNLTGTASPYIGNLTFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNALQGQIPDSR----------L 113 (771)
Q Consensus 44 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~----------l 113 (771)
.+++.|+|++|++++..+..|.++++|++|+|++|++++..|.+|+++++|++|+|++|.+++..|..+ +
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 111 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVA 111 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEEC
T ss_pred CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEc
Confidence 578888888888888877788888888888888888888778888888888888888888876555432 4
Q ss_pred cCCcccccCCccccCCCCCCEEecccccCcC-C-------CCccceeeecccccccccCccccCCCCCC----EEecccC
Q 041479 114 ILNKLEGNIPSELGSLLKFKGLGLANNYFTG-P-------IPHLNMFQVSVYSLTGSIPIQLLNITSME----YFHVSEN 181 (771)
Q Consensus 114 ~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~-------lp~L~~l~l~~n~l~~~~p~~~~~l~~L~----~L~Ls~N 181 (771)
..|.+++..|..|+++++|++|++++|++++ . +++|+.|++++|.+++..|..+..+++|+ +|++++|
T Consensus 112 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n 191 (606)
T 3vq2_A 112 VETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLN 191 (606)
T ss_dssp TTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTC
T ss_pred cCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCC
Confidence 4455555555666666666666666666653 2 33466666666666665555554443332 4555555
Q ss_pred cCcccCChhhhh--------------------------------------------------------------------
Q 041479 182 QLVGELPPHIGF-------------------------------------------------------------------- 193 (771)
Q Consensus 182 ~l~g~lp~~~~~-------------------------------------------------------------------- 193 (771)
.++ .+|+..+.
T Consensus 192 ~l~-~~~~~~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~ 270 (606)
T 3vq2_A 192 PID-FIQDQAFQGIKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTY 270 (606)
T ss_dssp CCC-EECTTTTTTCEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECC
T ss_pred Ccc-eeCcccccCceeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccc
Confidence 444 33333321
Q ss_pred ------------CCCCCcEEEeecCcccccCCccccCCCCCCEEEccccccCCCCCcC-----------------ccccc
Q 041479 194 ------------TLPNVRILLLAGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPED-----------------LDSLV 244 (771)
Q Consensus 194 ------------~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-----------------~~~l~ 244 (771)
.+++|+.|++++|.+. .+| .+..+++|+.|++++|.++ .+|.. -..+.
T Consensus 271 ~~~~~~~~~~~~~l~~L~~L~l~~~~~~-~l~-~l~~~~~L~~L~l~~n~l~-~lp~~~l~~L~~L~l~~n~~~~~~~~~ 347 (606)
T 3vq2_A 271 TNDFSDDIVKFHCLANVSAMSLAGVSIK-YLE-DVPKHFKWQSLSIIRCQLK-QFPTLDLPFLKSLTLTMNKGSISFKKV 347 (606)
T ss_dssp CTTCCGGGGSCGGGTTCSEEEEESCCCC-CCC-CCCTTCCCSEEEEESCCCS-SCCCCCCSSCCEEEEESCSSCEECCCC
T ss_pred cccccccccccccCCCCCEEEecCccch-hhh-hccccccCCEEEcccccCc-ccccCCCCccceeeccCCcCccchhhc
Confidence 1233333333333333 122 4555555666666666553 23310 00234
Q ss_pred CCCCCcEEEccCcccccc--CChhhhhcccccceeecccCcCcccCcccccccCCcceEecCCccceeccC-ccccCCCC
Q 041479 245 NCTYLEVVSLSVNSLSGT--LPNSLANFSSHLRYLYMSANPISGSIPTEIGNLKNLIIIAIEKFILIRNIP-ISVGYLLK 321 (771)
Q Consensus 245 ~l~~L~~L~Ls~N~l~~~--~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p-~~~~~l~~ 321 (771)
.+++|++|++++|++++. +|..+..+. +|++|++++|.+++ +|..|.++++|+.|++++|.+.+..| ..+..+++
T Consensus 348 ~l~~L~~L~ls~n~l~~~~~~~~~~~~~~-~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~ 425 (606)
T 3vq2_A 348 ALPSLSYLDLSRNALSFSGCCSYSDLGTN-SLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEK 425 (606)
T ss_dssp CCTTCCEEECCSSCEEEEEECCHHHHCCS-CCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTT
T ss_pred cCCCCCEEECcCCccCCCcchhhhhccCC-cccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhcccc
Confidence 678888899999988855 377777775 79999999999984 66889999999999999999988887 68899999
Q ss_pred CCEEEccCCcccccCCcccccccccccccccCcccee-cCCcccccccce-eeecccCcccCCCCcCCCCCCCCCeEECC
Q 041479 322 LQVLSLFENNISREIPSSLGNFTFLTELNLCGNSIRG-SVPSALGSCHQL-WLDLSHNHLTGPIPLAVGNPKSIPHLDLS 399 (771)
Q Consensus 322 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~l-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 399 (771)
|++|++++|++++..|..+..+++|++|++++|++++ .+|..++.++.| .|++++|++++..|..|..+++|++|+|+
T Consensus 426 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls 505 (606)
T 3vq2_A 426 LLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMS 505 (606)
T ss_dssp CCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECC
Confidence 9999999999998899999999999999999999997 478899999999 89999999999999999999999999999
Q ss_pred CCcccccCCcchhhhhcccccccEEECcCCCCCCCCCcccc-cc-ccccccccCCCcccCC
Q 041479 400 KNELSGEIPSSLAWIFGYISIFAKLNLSYNNLDGDVPRKMI-FK-NASAISEAGNEKLCGG 458 (771)
Q Consensus 400 ~N~l~~~~p~~l~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~-~~-~~~~~~~~~n~~lc~~ 458 (771)
+|++++.+|..+. .+++|+.|+|++|+++ .+|..+. +. ++..+.+.+|++.|+.
T Consensus 506 ~N~l~~~~~~~~~----~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c 561 (606)
T 3vq2_A 506 HNNLLFLDSSHYN----QLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACIC 561 (606)
T ss_dssp SSCCSCEEGGGTT----TCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSS
T ss_pred CCcCCCcCHHHcc----CCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCC
Confidence 9999988888765 8899999999999998 5555432 32 4778899999999854
No 13
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=8.4e-44 Score=420.27 Aligned_cols=182 Identities=20% Similarity=0.163 Sum_probs=131.0
Q ss_pred ccceeecccCcCcccCcccccccCCcceEecCCccce--eccCccccCCCCCCEEEccCCcccccCCccccccccccccc
Q 041479 273 HLRYLYMSANPISGSIPTEIGNLKNLIIIAIEKFILI--RNIPISVGYLLKLQVLSLFENNISREIPSSLGNFTFLTELN 350 (771)
Q Consensus 273 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~--~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 350 (771)
+|++|++++|++++..+..|..+++|+.|++++|.+. +.+|..+..+++|+.|++++|++++..|..|.++++|++|+
T Consensus 431 ~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~ 510 (680)
T 1ziw_A 431 NIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILD 510 (680)
T ss_dssp TCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhccccccCEEe
Confidence 3444444444444444444444444444444444443 34567777888888888888888877777788888888888
Q ss_pred ccCccceecCC--------cccccccce-eeecccCcccCCCCcCCCCCCCCCeEECCCCcccccCCcchhhhhcccccc
Q 041479 351 LCGNSIRGSVP--------SALGSCHQL-WLDLSHNHLTGPIPLAVGNPKSIPHLDLSKNELSGEIPSSLAWIFGYISIF 421 (771)
Q Consensus 351 Ls~N~l~~~~p--------~~~~~l~~l-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~l~~L 421 (771)
|++|++++..+ ..+..++.| .|+|++|+++...+..|..+++|+.|+|++|+|++..+..+ ..+++|
T Consensus 511 Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~----~~l~~L 586 (680)
T 1ziw_A 511 LQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVF----NNQVSL 586 (680)
T ss_dssp CCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTT----TTCTTC
T ss_pred CCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHh----CCCCCC
Confidence 88888876432 236777778 88899998886666678999999999999999996555543 488999
Q ss_pred cEEECcCCCCCCCCCccc--cccccccccccCCCcccCC
Q 041479 422 AKLNLSYNNLDGDVPRKM--IFKNASAISEAGNEKLCGG 458 (771)
Q Consensus 422 ~~L~Ls~N~l~~~~p~~~--~~~~~~~~~~~~n~~lc~~ 458 (771)
+.|+|++|+|++..|..+ .+.++..+.+.+||+.|+-
T Consensus 587 ~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c 625 (680)
T 1ziw_A 587 KSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTC 625 (680)
T ss_dssp CEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCC
T ss_pred CEEECCCCcCCccChhHhcccccccCEEEccCCCcccCC
Confidence 999999999997666544 3678888999999999964
No 14
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=5.3e-45 Score=379.12 Aligned_cols=230 Identities=21% Similarity=0.301 Sum_probs=187.0
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEe
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEF 604 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~ 604 (771)
..+|+|++|+||+|+++.+++.||||++.... ....++|.+|++++++++|||||+++++|.+.. .+....||||||
T Consensus 32 ~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~-~~~~~~~lvmEy 110 (290)
T 3fpq_A 32 IEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTV-KGKKCIVLVTEL 110 (290)
T ss_dssp EEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEE-TTEEEEEEEEEC
T ss_pred eEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeecc-CCCcEEEEEEeC
Confidence 35899999999999999999999999996543 345678999999999999999999999986532 122367999999
Q ss_pred ccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCC-CCceEEecccCccccCcccCCc
Q 041479 605 MHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN-DMTAHMGDFGLTRFIPEVMSSN 680 (771)
Q Consensus 605 ~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~-~~~~kl~DfGla~~~~~~~~~~ 680 (771)
|++|+|.++ ...+++..+..++.||+.||+|||+. .++|+||||||+|||++. ++.+||+|||+|+.....
T Consensus 111 ~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~-~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~---- 185 (290)
T 3fpq_A 111 MTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS---- 185 (290)
T ss_dssp CCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTT----
T ss_pred CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC-CCCEEecccChhheeEECCCCCEEEEeCcCCEeCCCC----
Confidence 999999877 45689999999999999999999986 234999999999999984 789999999999854332
Q ss_pred ccccccccccccccchh--------------HHHHHHHHHhCCCCCCccccCCccHHHHH-HhhCCCchhhhcCcccccc
Q 041479 681 QCSSVGLKGTVGYATPE--------------YGILLLEIFTGKRPTSDMFTEGLDLHNFV-KMALPDQILQVLDPLFLVG 745 (771)
Q Consensus 681 ~~~~~~~~gt~~y~aPE--------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 745 (771)
...+.+||+.||||| +||++|||+||+.||.+..... .+...+ ....|...+..+++.+..+
T Consensus 186 --~~~~~~GTp~YmAPE~~~~~y~~~~DiwSlGvilyelltg~~Pf~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~l 262 (290)
T 3fpq_A 186 --FAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAA-QIYRRVTSGVKPASFDKVAIPEVKEI 262 (290)
T ss_dssp --SBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHH-HHHHHHTTTCCCGGGGGCCCHHHHHH
T ss_pred --ccCCcccCccccCHHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcHH-HHHHHHHcCCCCCCCCccCCHHHHHH
Confidence 123468999999999 7999999999999997542222 222333 3333445566667777777
Q ss_pred CcccChhchhhcCCHHHHHH
Q 041479 746 GVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 746 ~~~cl~~~p~~Rpt~~~vl~ 765 (771)
..+||++||++|||+.|+++
T Consensus 263 i~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 263 IEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp HHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHccCChhHCcCHHHHhc
Confidence 88999999999999999985
No 15
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=2e-43 Score=396.63 Aligned_cols=374 Identities=18% Similarity=0.196 Sum_probs=317.2
Q ss_pred CCCcccee--eeecCCC--------CcEEEEEcCCCCCcccCCccccCCCCCcEEEcCCCcccccC-CccccCCCCCCEE
Q 041479 29 VNFCQWLG--VTCSLKY--------QRVILLNLSGQNLTGTASPYIGNLTFLRLINLQQNNFSSNI-PHEIGRLFRLRHI 97 (771)
Q Consensus 29 ~~~c~w~~--v~c~~~~--------~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L 97 (771)
...|.|.+ |.|+... .+++.|||++|++++..|..|+.+++|++|+|++|.+.+.+ |..|.++++|++|
T Consensus 5 ~~~c~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L 84 (455)
T 3v47_A 5 TSECSVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIIL 84 (455)
T ss_dssp --CCEEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEE
T ss_pred cceeEEEccccCcCCCCcccCCCCCCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEE
Confidence 34566665 7776543 57899999999999888889999999999999999987544 6679999999999
Q ss_pred ecccCcCcccCCcccccCCcccccCCccccCCCCCCEEecccccCcCCCCccceeeecccccccccCc--cccCCCCCCE
Q 041479 98 IFNSNALQGQIPDSRLILNKLEGNIPSELGSLLKFKGLGLANNYFTGPIPHLNMFQVSVYSLTGSIPI--QLLNITSMEY 175 (771)
Q Consensus 98 ~Ls~N~l~~~~p~~~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~L~~l~l~~n~l~~~~p~--~~~~l~~L~~ 175 (771)
+|++|+++ +..|..|+++++|++|+|++|++++ ..|. .+.++++|++
T Consensus 85 ~Ls~n~l~--------------~~~~~~~~~l~~L~~L~L~~n~l~~-----------------~~~~~~~~~~l~~L~~ 133 (455)
T 3v47_A 85 KLDYNQFL--------------QLETGAFNGLANLEVLTLTQCNLDG-----------------AVLSGNFFKPLTSLEM 133 (455)
T ss_dssp ECTTCTTC--------------EECTTTTTTCTTCCEEECTTSCCBT-----------------HHHHSSTTTTCTTCCE
T ss_pred eCCCCccC--------------ccChhhccCcccCCEEeCCCCCCCc-----------------cccCcccccCcccCCE
Confidence 99999865 4567788899999999999988874 2233 3888999999
Q ss_pred EecccCcCcccCChhhhhCCCCCcEEEeecCcccccCCccccCC--CCCCEEEccccccCCCCCcCcc-----cccCCCC
Q 041479 176 FHVSENQLVGELPPHIGFTLPNVRILLLAGNQFFGNIPHSISNA--SKLEWLDFANNSLTGLIPEDLD-----SLVNCTY 248 (771)
Q Consensus 176 L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l--~~L~~L~Ls~N~l~~~~p~~~~-----~l~~l~~ 248 (771)
|+|++|++++..|..++..+++|++|++++|++++..|..+..+ .+|+.|++++|.+++..+..+. .+..+++
T Consensus 134 L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~ 213 (455)
T 3v47_A 134 LVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTS 213 (455)
T ss_dssp EECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCE
T ss_pred EECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhccccccccccccccCcccccchhhccccccccccccce
Confidence 99999999966677756689999999999999999999988877 7899999999999987655431 2346789
Q ss_pred CcEEEccCccccccCChhhhhcc--cccceeecccCcCccc----------Cccccccc--CCcceEecCCccceeccCc
Q 041479 249 LEVVSLSVNSLSGTLPNSLANFS--SHLRYLYMSANPISGS----------IPTEIGNL--KNLIIIAIEKFILIRNIPI 314 (771)
Q Consensus 249 L~~L~Ls~N~l~~~~p~~~~~l~--~~L~~L~Ls~N~l~~~----------~p~~~~~l--~~L~~L~l~~n~l~~~~p~ 314 (771)
|++|++++|++++..|..+.... ++|+.|++++|.+.+. .+..|.++ ++|+.|++++|.+.+.+|.
T Consensus 214 L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~ 293 (455)
T 3v47_A 214 ITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKS 293 (455)
T ss_dssp EEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTT
T ss_pred eeeEecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCcccccccccccCceEEEecCccccccchh
Confidence 99999999999988888776641 3799999999866532 22233333 6899999999999999999
Q ss_pred cccCCCCCCEEEccCCcccccCCcccccccccccccccCccceecCCcccccccce-eeecccCcccCCCCcCCCCCCCC
Q 041479 315 SVGYLLKLQVLSLFENNISREIPSSLGNFTFLTELNLCGNSIRGSVPSALGSCHQL-WLDLSHNHLTGPIPLAVGNPKSI 393 (771)
Q Consensus 315 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l-~L~Ls~N~l~~~~p~~~~~l~~L 393 (771)
.+..+++|++|+|++|++++..|..|..+++|++|+|++|++++..|..+..++.| .|+|++|++++..|..|..+++|
T Consensus 294 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 373 (455)
T 3v47_A 294 VFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNL 373 (455)
T ss_dssp TTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTC
T ss_pred hcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhccccccc
Confidence 99999999999999999999889999999999999999999999989999999999 99999999999999999999999
Q ss_pred CeEECCCCcccccCCcchhhhhcccccccEEECcCCCCCCCCCc
Q 041479 394 PHLDLSKNELSGEIPSSLAWIFGYISIFAKLNLSYNNLDGDVPR 437 (771)
Q Consensus 394 ~~L~Ls~N~l~~~~p~~l~~~~~~l~~L~~L~Ls~N~l~~~~p~ 437 (771)
++|+|++|+|++..+..+ ..+++|+.|+|++|+++|.+|.
T Consensus 374 ~~L~L~~N~l~~~~~~~~----~~l~~L~~L~l~~N~l~~~~~~ 413 (455)
T 3v47_A 374 KELALDTNQLKSVPDGIF----DRLTSLQKIWLHTNPWDCSCPR 413 (455)
T ss_dssp CEEECCSSCCSCCCTTTT----TTCTTCCEEECCSSCBCCCTTT
T ss_pred cEEECCCCccccCCHhHh----ccCCcccEEEccCCCcccCCCc
Confidence 999999999997655544 4889999999999999999995
No 16
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=7.5e-45 Score=384.35 Aligned_cols=231 Identities=20% Similarity=0.162 Sum_probs=187.8
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEec
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFM 605 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~~ 605 (771)
...+|+|++|+||+|+++.+++.||||+++.... +.+|+.++++++|||||++++++.+.+ ..|||||||
T Consensus 63 ~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~-----~~~ivmEy~ 132 (336)
T 4g3f_A 63 QPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGP-----WVNIFMELL 132 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETT-----EEEEEECCC
T ss_pred CcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECC-----EEEEEEecc
Confidence 3458999999999999999999999999975432 246999999999999999999998876 789999999
Q ss_pred cCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCC-ceEEecccCccccCcccCCc-
Q 041479 606 HHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDM-TAHMGDFGLTRFIPEVMSSN- 680 (771)
Q Consensus 606 ~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~-~~kl~DfGla~~~~~~~~~~- 680 (771)
+||+|.++ ...+++.++..|+.|++.||+|||+. +||||||||+|||++.++ ++||+|||+|+.+.......
T Consensus 133 ~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~ 209 (336)
T 4g3f_A 133 EGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKS 209 (336)
T ss_dssp TTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCTTCEEC--------
T ss_pred CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccc
Confidence 99999887 35699999999999999999999986 999999999999999887 69999999998765433211
Q ss_pred ccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCC-CchhhhcCccccc
Q 041479 681 QCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALP-DQILQVLDPLFLV 744 (771)
Q Consensus 681 ~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 744 (771)
.......+||+.||||| +||++|||+||+.||.+..... .+..+.....+ ...++.+++.+..
T Consensus 210 ~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~~~~-~~~~i~~~~~~~~~~~~~~s~~~~~ 288 (336)
T 4g3f_A 210 LLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYFRGP-LCLKIASEPPPIREIPPSCAPLTAQ 288 (336)
T ss_dssp ----CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTCCSC-CHHHHHHSCCGGGGSCTTSCHHHHH
T ss_pred eecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHH-HHHHHHcCCCCchhcCccCCHHHHH
Confidence 12233467999999999 7999999999999997654333 34444444333 2345566777777
Q ss_pred cCcccChhchhhcCCHHHHHHHHHHh
Q 041479 745 GGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 745 ~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
...+||++||++|||+.|+++.|.++
T Consensus 289 li~~~L~~dP~~R~sa~el~~~l~~~ 314 (336)
T 4g3f_A 289 AIQEGLRKEPVHRASAMELRRKVGKA 314 (336)
T ss_dssp HHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHccCCHhHCcCHHHHHHHHHHH
Confidence 77899999999999999999988765
No 17
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=6.2e-45 Score=386.06 Aligned_cols=229 Identities=20% Similarity=0.277 Sum_probs=192.0
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
+.....+|+|.+|+||+|+++.+++.||||++........+.+.+|+++|++++|||||++++++.+.+ ..||||
T Consensus 76 y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~-----~~~ivm 150 (346)
T 4fih_A 76 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGD-----ELWVVM 150 (346)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETT-----EEEEEE
T ss_pred cEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC-----EEEEEE
Confidence 444456999999999999999999999999998766556678999999999999999999999998877 789999
Q ss_pred EeccCCCCCCC--cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCc
Q 041479 603 EFMHHGSLESC--PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSN 680 (771)
Q Consensus 603 e~~~~g~L~~~--~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 680 (771)
|||++|+|.++ ...+++.++..|+.|++.||+|||+. +||||||||+|||++.++.+||+|||+|+.+.....
T Consensus 151 Ey~~gg~L~~~l~~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~-- 225 (346)
T 4fih_A 151 EFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP-- 225 (346)
T ss_dssp CCCTTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC--
T ss_pred eCCCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCcCceecCCCCC--
Confidence 99999999876 45689999999999999999999996 999999999999999999999999999987654322
Q ss_pred ccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCC--CchhhhcCcccc
Q 041479 681 QCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALP--DQILQVLDPLFL 743 (771)
Q Consensus 681 ~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 743 (771)
...+.+||+.||||| +||++|||++|+.||.+.. .....+......+ ......+++.+.
T Consensus 226 --~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~--~~~~~~~i~~~~~~~~~~~~~~s~~~~ 301 (346)
T 4fih_A 226 --RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP--PLKAMKMIRDNLPPRLKNLHKVSPSLK 301 (346)
T ss_dssp --CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC--HHHHHHHHHHSSCCCCSCGGGSCHHHH
T ss_pred --cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC--HHHHHHHHHcCCCCCCCccccCCHHHH
Confidence 223568999999999 6999999999999997532 1223333333333 233445667777
Q ss_pred ccCcccChhchhhcCCHHHHHH
Q 041479 744 VGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 744 ~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
.+..+||++||++|||+.|+++
T Consensus 302 dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 302 GFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp HHHHHHSCSSTTTSCCHHHHTT
T ss_pred HHHHHHcCCChhHCcCHHHHhc
Confidence 7778999999999999999875
No 18
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=7.4e-43 Score=406.59 Aligned_cols=382 Identities=18% Similarity=0.164 Sum_probs=312.1
Q ss_pred CCCcEEEEEcCCCCCcccCCccccCCCCCcEEEcCCCcccccCCccccCCCCCCEEecccCcCcccCCcc----------
Q 041479 42 KYQRVILLNLSGQNLTGTASPYIGNLTFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNALQGQIPDS---------- 111 (771)
Q Consensus 42 ~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~---------- 111 (771)
...+++.|+|++|+++++.|.+|.++++|++|+|++|++++..|.+|+++++|++|+|++|.+++..+..
T Consensus 54 ~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 133 (606)
T 3vq2_A 54 NFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKL 133 (606)
T ss_dssp TCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEE
T ss_pred CCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEE
Confidence 3478999999999999888889999999999999999999888999999999999999999998654332
Q ss_pred cccCCcccc-cCCccccCCCCCCEEecccccCcCCCCc-----------cceeeecccccccccCc--------------
Q 041479 112 RLILNKLEG-NIPSELGSLLKFKGLGLANNYFTGPIPH-----------LNMFQVSVYSLTGSIPI-------------- 165 (771)
Q Consensus 112 ~l~~n~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~lp~-----------L~~l~l~~n~l~~~~p~-------------- 165 (771)
.+..|.+.+ .+|..|+++++|+.|++++|++++..|. +..++++.|.+++..+.
T Consensus 134 ~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~~L~~L~L~~ 213 (606)
T 3vq2_A 134 NVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGIKLHELTLRG 213 (606)
T ss_dssp ECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEES
T ss_pred eCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccCCCcceeCcccccCceeeeeeccC
Confidence 266777776 5799999999999999999998854332 12455554444432221
Q ss_pred --------------------------------------------------------------------------------
Q 041479 166 -------------------------------------------------------------------------------- 165 (771)
Q Consensus 166 -------------------------------------------------------------------------------- 165 (771)
T Consensus 214 n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~l~~L~~L~l~ 293 (606)
T 3vq2_A 214 NFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVKFHCLANVSAMSLA 293 (606)
T ss_dssp CCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGSCGGGTTCSEEEEE
T ss_pred CccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccccccccccccccccCCCCCEEEec
Confidence
Q ss_pred --------cccCCCCCCEEecccCcCcccCChhhhhCCCCCcEEEeecCcccccCCccccCCCCCCEEEccccccCCCC-
Q 041479 166 --------QLLNITSMEYFHVSENQLVGELPPHIGFTLPNVRILLLAGNQFFGNIPHSISNASKLEWLDFANNSLTGLI- 236 (771)
Q Consensus 166 --------~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~- 236 (771)
.+..+++|+.|++++|++ +.+|. + .+++|+.|++++|+..+.. .+..+++|++|++++|++++..
T Consensus 294 ~~~~~~l~~l~~~~~L~~L~l~~n~l-~~lp~-~--~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~ 367 (606)
T 3vq2_A 294 GVSIKYLEDVPKHFKWQSLSIIRCQL-KQFPT-L--DLPFLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSFSGC 367 (606)
T ss_dssp SCCCCCCCCCCTTCCCSEEEEESCCC-SSCCC-C--CCSSCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEEEEE
T ss_pred CccchhhhhccccccCCEEEcccccC-ccccc-C--CCCccceeeccCCcCccch--hhccCCCCCEEECcCCccCCCcc
Confidence 223334555555555555 25552 2 5566666666666444333 5667888888888888888663
Q ss_pred -CcCcccccCCCCCcEEEccCccccccCChhhhhcccccceeecccCcCcccCc-ccccccCCcceEecCCccceeccCc
Q 041479 237 -PEDLDSLVNCTYLEVVSLSVNSLSGTLPNSLANFSSHLRYLYMSANPISGSIP-TEIGNLKNLIIIAIEKFILIRNIPI 314 (771)
Q Consensus 237 -p~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~l~~n~l~~~~p~ 314 (771)
|..+ ..+++|++|++++|.++ .+|..+..+. +|+.|++++|++++..| ..|.++++|+.|++++|.+.+..|.
T Consensus 368 ~~~~~---~~~~~L~~L~L~~n~l~-~~~~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 442 (606)
T 3vq2_A 368 CSYSD---LGTNSLRHLDLSFNGAI-IMSANFMGLE-ELQHLDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDG 442 (606)
T ss_dssp CCHHH---HCCSCCCEEECCSCSEE-EECCCCTTCT-TCCEEECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTT
T ss_pred hhhhh---ccCCcccEeECCCCccc-cchhhccCCC-CCCeeECCCCccCCccChhhhhccccCCEEECcCCCCCccchh
Confidence 5444 77899999999999998 5777788876 89999999999998887 7899999999999999999999999
Q ss_pred cccCCCCCCEEEccCCcccc-cCCcccccccccccccccCccceecCCcccccccce-eeecccCcccCCCCcCCCCCCC
Q 041479 315 SVGYLLKLQVLSLFENNISR-EIPSSLGNFTFLTELNLCGNSIRGSVPSALGSCHQL-WLDLSHNHLTGPIPLAVGNPKS 392 (771)
Q Consensus 315 ~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l-~L~Ls~N~l~~~~p~~~~~l~~ 392 (771)
.+..+++|++|++++|++++ .+|..|..+++|++|+|++|++++..|..+..++.| .|++++|++++..|..|..+++
T Consensus 443 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 522 (606)
T 3vq2_A 443 IFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYS 522 (606)
T ss_dssp TTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTT
T ss_pred hhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCc
Confidence 99999999999999999997 479999999999999999999999999999999999 9999999999999999999999
Q ss_pred CCeEECCCCcccccCCcchhhhhcccc-cccEEECcCCCCCCCCCccc
Q 041479 393 IPHLDLSKNELSGEIPSSLAWIFGYIS-IFAKLNLSYNNLDGDVPRKM 439 (771)
Q Consensus 393 L~~L~Ls~N~l~~~~p~~l~~~~~~l~-~L~~L~Ls~N~l~~~~p~~~ 439 (771)
|++|+|++|+|+ .+|..+. .++ +|+.|++++|++.|.++..+
T Consensus 523 L~~L~l~~N~l~-~~p~~~~----~l~~~L~~l~l~~N~~~c~c~~~~ 565 (606)
T 3vq2_A 523 LSTLDCSFNRIE-TSKGILQ----HFPKSLAFFNLTNNSVACICEHQK 565 (606)
T ss_dssp CCEEECTTSCCC-CEESCGG----GSCTTCCEEECCSCCCCCSSTTHH
T ss_pred CCEEECCCCcCc-ccCHhHh----hhcccCcEEEccCCCcccCCccHH
Confidence 999999999999 6666554 665 69999999999999988654
No 19
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=2.7e-44 Score=381.78 Aligned_cols=230 Identities=18% Similarity=0.178 Sum_probs=183.9
Q ss_pred cccccccccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEE
Q 041479 522 DLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRA 599 (771)
Q Consensus 522 ~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 599 (771)
.+.....+|+|++|+||+|+++.+++.||||++.... ....+.|.+|++++++++|||||++++++.+.+ ..|
T Consensus 25 ~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~-----~~y 99 (350)
T 4b9d_A 25 KYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENG-----SLY 99 (350)
T ss_dssp CEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT-----EEE
T ss_pred ceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECC-----EEE
Confidence 3445567999999999999999999999999997543 445678999999999999999999999998876 789
Q ss_pred EEEEeccCCCCCCC-----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccC
Q 041479 600 LVYEFMHHGSLESC-----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIP 674 (771)
Q Consensus 600 lv~e~~~~g~L~~~-----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~ 674 (771)
||||||+||+|.++ ...+++.++..|+.|++.||+|||+. +||||||||+|||++.++.+||+|||+|+...
T Consensus 100 iVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~ 176 (350)
T 4b9d_A 100 IVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIARVLN 176 (350)
T ss_dssp EEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTTEESCCC
T ss_pred EEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccccceeec
Confidence 99999999999776 23468889999999999999999996 99999999999999999999999999999765
Q ss_pred cccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcC
Q 041479 675 EVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLD 739 (771)
Q Consensus 675 ~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 739 (771)
.... .....+||+.||||| +||++|||+||+.||.+... ...+..+.....+ ..+..++
T Consensus 177 ~~~~----~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~-~~~~~~i~~~~~~-~~~~~~s 250 (350)
T 4b9d_A 177 STVE----LARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSM-KNLVLKIISGSFP-PVSLHYS 250 (350)
T ss_dssp HHHH----HHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHHHHHHTCCC-CCCTTSC
T ss_pred CCcc----cccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH-HHHHHHHHcCCCC-CCCccCC
Confidence 4221 123457999999999 69999999999999975321 1123334444433 3444566
Q ss_pred ccccccCcccChhchhhcCCHHHHHH
Q 041479 740 PLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 740 ~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
+.+..+..+||++||++|||+.|+++
T Consensus 251 ~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 251 YDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHHHccCChhHCcCHHHHhc
Confidence 67777778999999999999999985
No 20
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=5.6e-43 Score=402.68 Aligned_cols=409 Identities=19% Similarity=0.181 Sum_probs=312.8
Q ss_pred CccceeeeecCC-----------CCcEEEEEcCCCCCcccCCccccCCCCCcEEEcCCCcccccCCccccCCCCCCEEec
Q 041479 31 FCQWLGVTCSLK-----------YQRVILLNLSGQNLTGTASPYIGNLTFLRLINLQQNNFSSNIPHEIGRLFRLRHIIF 99 (771)
Q Consensus 31 ~c~w~~v~c~~~-----------~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 99 (771)
.|.|.|+ |+.. ..+++.|+|++|++++..|..|..+++|++|+|++|+|++..|++|+++++|++|+|
T Consensus 3 ~C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L 81 (549)
T 2z81_A 3 SCDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDL 81 (549)
T ss_dssp EECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred cCCCCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEEC
Confidence 5999998 8643 248999999999999998999999999999999999999988899999999999999
Q ss_pred ccCcCcccCCcc----------cccCCcccc-cCCccccCCCCCCEEecccccCcC--------CCCccceeeecccccc
Q 041479 100 NSNALQGQIPDS----------RLILNKLEG-NIPSELGSLLKFKGLGLANNYFTG--------PIPHLNMFQVSVYSLT 160 (771)
Q Consensus 100 s~N~l~~~~p~~----------~l~~n~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~--------~lp~L~~l~l~~n~l~ 160 (771)
++|++++..|.. .+..|.+++ ..|..|+++++|+.|++++|++.+ .++.|+.|+++.|.++
T Consensus 82 s~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~ 161 (549)
T 2z81_A 82 SDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLR 161 (549)
T ss_dssp TTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCC
T ss_pred CCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCccc
Confidence 999998655432 255566665 356677788888888888887432 2445778888888888
Q ss_pred cccCccccCCCCCCEEecccCcCcccCChhhhhCCCCCcEEEeecCcccccC---CccccCCCCCCEEEccccccCCCCC
Q 041479 161 GSIPIQLLNITSMEYFHVSENQLVGELPPHIGFTLPNVRILLLAGNQFFGNI---PHSISNASKLEWLDFANNSLTGLIP 237 (771)
Q Consensus 161 ~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~---p~~~~~l~~L~~L~Ls~N~l~~~~p 237 (771)
+..|..+..+++|+.|+++.|.+. .+|..++..+++|++|++++|++++.. ......+++|+.|++++|.+++..+
T Consensus 162 ~~~~~~l~~l~~L~~L~l~~n~~~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~ 240 (549)
T 2z81_A 162 NYQSQSLKSIRDIHHLTLHLSESA-FLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDESF 240 (549)
T ss_dssp EECTTTTTTCSEEEEEEEECSBST-THHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHH
T ss_pred ccChhhhhccccCceEecccCccc-ccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhHH
Confidence 777888888888888888888876 677666656788888888888887642 1223456778888888776653211
Q ss_pred cCc----------------------------------ccc--------------------------cCCCCCcEEEccCc
Q 041479 238 EDL----------------------------------DSL--------------------------VNCTYLEVVSLSVN 257 (771)
Q Consensus 238 ~~~----------------------------------~~l--------------------------~~l~~L~~L~Ls~N 257 (771)
..+ ..+ ..+.+|+.|++++|
T Consensus 241 ~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n 320 (549)
T 2z81_A 241 NELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYLFYDLSTVYSLLEKVKRITVENS 320 (549)
T ss_dssp HHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGGSCCCCHHHHHSTTCCEEEEESS
T ss_pred HHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhhcccchhhhhhcccceEEEeccC
Confidence 100 000 11246777888888
Q ss_pred cccccCChhhh-hcccccceeecccCcCcccCc---ccccccCCcceEecCCccceeccC--ccccCCCCCCEEEccCCc
Q 041479 258 SLSGTLPNSLA-NFSSHLRYLYMSANPISGSIP---TEIGNLKNLIIIAIEKFILIRNIP--ISVGYLLKLQVLSLFENN 331 (771)
Q Consensus 258 ~l~~~~p~~~~-~l~~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~l~~n~l~~~~p--~~~~~l~~L~~L~Ls~N~ 331 (771)
+++ .+|..++ .+ ++|++|++++|++++.+| ..++.+++|+.|++++|.+.+..+ ..+..+++|++|++++|+
T Consensus 321 ~l~-~ip~~~~~~l-~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~ 398 (549)
T 2z81_A 321 KVF-LVPCSFSQHL-KSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNT 398 (549)
T ss_dssp CCC-CCCHHHHHHC-TTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCC
T ss_pred ccc-cCCHHHHhcC-ccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCCCCEEECCCCC
Confidence 877 7787775 45 479999999999987664 347888999999999998866543 457888999999999999
Q ss_pred ccccCCcccccccccccccccCccceecCCcccccccce-eeecccCcccCCCCcCCCCCCCCCeEECCCCcccccCCcc
Q 041479 332 ISREIPSSLGNFTFLTELNLCGNSIRGSVPSALGSCHQL-WLDLSHNHLTGPIPLAVGNPKSIPHLDLSKNELSGEIPSS 410 (771)
Q Consensus 332 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 410 (771)
++ .+|..+..+++|++|++++|++++ +|..+. +.| .||+++|++++.+ ..+++|++|+|++|+|+ .+|..
T Consensus 399 l~-~lp~~~~~~~~L~~L~Ls~N~l~~-l~~~~~--~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~~ 469 (549)
T 2z81_A 399 FH-PMPDSCQWPEKMRFLNLSSTGIRV-VKTCIP--QTLEVLDVSNNNLDSFS----LFLPRLQELYISRNKLK-TLPDA 469 (549)
T ss_dssp CC-CCCSCCCCCTTCCEEECTTSCCSC-CCTTSC--TTCSEEECCSSCCSCCC----CCCTTCCEEECCSSCCS-SCCCG
T ss_pred Cc-cCChhhcccccccEEECCCCCccc-ccchhc--CCceEEECCCCChhhhc----ccCChhcEEECCCCccC-cCCCc
Confidence 98 678888889999999999999884 443332 456 7899999998643 57889999999999998 67763
Q ss_pred hhhhhcccccccEEECcCCCCCCCCCccc-cccccccccccCCCcccC
Q 041479 411 LAWIFGYISIFAKLNLSYNNLDGDVPRKM-IFKNASAISEAGNEKLCG 457 (771)
Q Consensus 411 l~~~~~~l~~L~~L~Ls~N~l~~~~p~~~-~~~~~~~~~~~~n~~lc~ 457 (771)
. .+++|+.|+|++|++++.+|..+ ...++..+.+.+|++.|.
T Consensus 470 -~----~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 512 (549)
T 2z81_A 470 -S----LFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 512 (549)
T ss_dssp -G----GCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCC
T ss_pred -c----cCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCC
Confidence 2 67899999999999998777643 356777888999988774
No 21
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.9e-43 Score=372.60 Aligned_cols=242 Identities=21% Similarity=0.203 Sum_probs=178.8
Q ss_pred ccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEe
Q 041479 525 LNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEF 604 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~ 604 (771)
....+|+|+||+||+|+++ ++.||||++..... ....+.+|+..+.+++|||||+++|+|.+.+. .....||||||
T Consensus 7 L~~~iG~G~fG~Vy~~~~~--g~~VAvK~l~~~~~-~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~-~~~~~~lV~Ey 82 (303)
T 3hmm_A 7 LQESIGKGRFGEVWRGKWR--GEEVAVKIFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKDNG-TWTQLWLVSDY 82 (303)
T ss_dssp EEEEEEECSSSEEEEEEET--TEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECS-SSEEEEEEEEC
T ss_pred EEEEEeeCCCeEEEEEEEC--CEEEEEEEECccch-hhHHHHHHHHHHhcCCCCCCCcEEEEEEecCC-CceEEEEEecC
Confidence 3456899999999999984 67999999965432 22334456666778999999999999986542 12257999999
Q ss_pred ccCCCCCCC--cccCCHHHHHHHHHHHHHHHHHHHhc-----CCCCeEecCCCCCCeeeCCCCceEEecccCccccCccc
Q 041479 605 MHHGSLESC--PRILSFLRRLNIAIDVASALEYLHHH-----CKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVM 677 (771)
Q Consensus 605 ~~~g~L~~~--~~~l~~~~~~~i~~~ia~gL~~LH~~-----~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~ 677 (771)
|++|+|.++ ...++|.++.+++.|+|+||+|||+. +.++|+||||||+|||++.++.+||+|||+|+......
T Consensus 83 ~~~gsL~~~l~~~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~ 162 (303)
T 3hmm_A 83 HEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSAT 162 (303)
T ss_dssp CTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEETTT
T ss_pred CCCCcHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccccCCC
Confidence 999999887 45689999999999999999999975 24589999999999999999999999999998765433
Q ss_pred CCcccccccccccccccchh---------------------HHHHHHHHHhCCCCCC----------ccccCCccHHHHH
Q 041479 678 SSNQCSSVGLKGTVGYATPE---------------------YGILLLEIFTGKRPTS----------DMFTEGLDLHNFV 726 (771)
Q Consensus 678 ~~~~~~~~~~~gt~~y~aPE---------------------~Gv~l~el~tg~~P~~----------~~~~~~~~~~~~~ 726 (771)
..........+||+.||||| |||++|||+||..|+. +.........++.
T Consensus 163 ~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 242 (303)
T 3hmm_A 163 DTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMR 242 (303)
T ss_dssp TEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHH
T ss_pred CceeeecccccccccccCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHHHH
Confidence 22222334567999999999 6999999999977653 2222222233332
Q ss_pred Hh----hCCCchhhhc-----CccccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 727 KM----ALPDQILQVL-----DPLFLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 727 ~~----~~~~~~~~~~-----~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
.. ..++.++... ...+...+.+||+.||++||||.||++.|+++
T Consensus 243 ~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~L~~l 295 (303)
T 3hmm_A 243 KVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL 295 (303)
T ss_dssp HHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHHHHHHHHHH
Confidence 22 2222222211 12344566799999999999999999999876
No 22
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=4.1e-44 Score=383.52 Aligned_cols=240 Identities=22% Similarity=0.264 Sum_probs=196.1
Q ss_pred cccccccccccccceEEEEEecCC-----CeEEEEEEeeccc-hhhHHHHHHHHHHHhccCC-CCceeEEEEeecCCCCC
Q 041479 522 DLLLNVSYESLVKATVYKGILDLD-----QTFIAVKVLFLHQ-RGALKSFMAECQALRNIRH-RNLVKIITACSTSDFQG 594 (771)
Q Consensus 522 ~~~~~~~l~~~~~~~Vy~~~~~~~-----~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H-~nIv~l~~~~~~~~~~~ 594 (771)
.+.....+|+|+||+||+|++... ++.||||++.... ....++|.+|+++|++++| ||||+++|+|.+.+.
T Consensus 65 ~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~-- 142 (353)
T 4ase_A 65 RLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG-- 142 (353)
T ss_dssp GEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTS--
T ss_pred HeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCC--
Confidence 334445689999999999998654 3689999997553 3446789999999999965 999999999876431
Q ss_pred ceeEEEEEEeccCCCCCCCc-------------------ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCee
Q 041479 595 NYFRALVYEFMHHGSLESCP-------------------RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVL 655 (771)
Q Consensus 595 ~~~~~lv~e~~~~g~L~~~~-------------------~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NIL 655 (771)
..|+|||||++|+|.++. ..+++.++..|+.|||+||+|||+. +||||||||+|||
T Consensus 143 --~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRDLK~~NIL 217 (353)
T 4ase_A 143 --PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNIL 217 (353)
T ss_dssp --CCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEE
T ss_pred --EEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCccCcccee
Confidence 579999999999997652 2378999999999999999999996 8999999999999
Q ss_pred eCCCCceEEecccCccccCcccCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCC
Q 041479 656 LDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEG 719 (771)
Q Consensus 656 l~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~ 719 (771)
+++++.+||+|||+|+.+..... .......+||+.||||| |||++|||+| |+.||.+....
T Consensus 218 l~~~~~vKi~DFGlar~~~~~~~--~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~- 294 (353)
T 4ase_A 218 LSEKNVVKICDFGLARDIYKDPD--YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID- 294 (353)
T ss_dssp ECGGGCEEECCCGGGSCTTTCTT--SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS-
T ss_pred eCCCCCEEECcchhhhhcccCCC--ceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHH-
Confidence 99999999999999997654332 22233467999999999 7999999998 99999875322
Q ss_pred ccHHHHHHhhCCCchhhhcCccccccCcccChhchhhcCCHHHHHHHHHHhC
Q 041479 720 LDLHNFVKMALPDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAIL 771 (771)
Q Consensus 720 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~l 771 (771)
..+...+....+...++.+++.+...+.+||+.||++|||+.||++.|+++|
T Consensus 295 ~~~~~~i~~g~~~~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L~~ll 346 (353)
T 4ase_A 295 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 346 (353)
T ss_dssp HHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence 3355555555555566677788888888999999999999999999998874
No 23
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=2.2e-43 Score=411.66 Aligned_cols=349 Identities=20% Similarity=0.263 Sum_probs=305.8
Q ss_pred CCcccCCccccCCCCCcEEEcCCCccccc-----------------CCcccc--CCCCCCEEecccCcCcccCCcccccC
Q 041479 55 NLTGTASPYIGNLTFLRLINLQQNNFSSN-----------------IPHEIG--RLFRLRHIIFNSNALQGQIPDSRLIL 115 (771)
Q Consensus 55 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~-----------------~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~l~~ 115 (771)
++++ +|++|+++++|++|+|++|+|++. +|..++ ++++|++|+|++|.+.
T Consensus 194 ~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~---------- 262 (636)
T 4eco_A 194 NITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNL---------- 262 (636)
T ss_dssp EEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTC----------
T ss_pred CCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCC----------
Confidence 3445 788999999999999999999986 999999 9999999999999965
Q ss_pred CcccccCCccccCCCCCCEEeccccc-CcC-CC-------------CccceeeecccccccccCc--cccCCCCCCEEec
Q 041479 116 NKLEGNIPSELGSLLKFKGLGLANNY-FTG-PI-------------PHLNMFQVSVYSLTGSIPI--QLLNITSMEYFHV 178 (771)
Q Consensus 116 n~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~-~l-------------p~L~~l~l~~n~l~~~~p~--~~~~l~~L~~L~L 178 (771)
+.+|..|+++++|+.|++++|+ +++ .+ +.|+.|++++|+++ .+|. .+.++++|++|++
T Consensus 263 ----~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L 337 (636)
T 4eco_A 263 ----TKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLEC 337 (636)
T ss_dssp ----SSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEEC
T ss_pred ----ccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeC
Confidence 5788899999999999999998 876 22 67999999999999 8888 8999999999999
Q ss_pred ccCcCcccCChhhhhCCCCCcEEEeecCcccccCCccccCCCC-CCEEEccccccCCCCCcCcccccCCCCCcEEEccCc
Q 041479 179 SENQLVGELPPHIGFTLPNVRILLLAGNQFFGNIPHSISNASK-LEWLDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVN 257 (771)
Q Consensus 179 s~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~-L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N 257 (771)
++|+++|.+| .+. .+++|++|+|++|+++ .+|..|..+++ |++|++++|+++ .+|..+.. ..+++|+.|++++|
T Consensus 338 ~~N~l~g~ip-~~~-~l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~-~~l~~L~~L~Ls~N 412 (636)
T 4eco_A 338 LYNQLEGKLP-AFG-SEIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDA-KSVSVMSAIDFSYN 412 (636)
T ss_dssp CSCCCEEECC-CCE-EEEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCT-TCSSCEEEEECCSS
T ss_pred cCCcCccchh-hhC-CCCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhh-cccCccCEEECcCC
Confidence 9999999999 554 8999999999999999 78888999999 999999999999 56766522 23458999999999
Q ss_pred cccccCChhhh-------hcccccceeecccCcCcccCcccccccCCcceEecCCccceeccCccc-cCC-------CCC
Q 041479 258 SLSGTLPNSLA-------NFSSHLRYLYMSANPISGSIPTEIGNLKNLIIIAIEKFILIRNIPISV-GYL-------LKL 322 (771)
Q Consensus 258 ~l~~~~p~~~~-------~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~-~~l-------~~L 322 (771)
++++.+|..+. .+. +|++|+|++|+|++..+..+..+++|+.|++++|.+. .+|..+ ... ++|
T Consensus 413 ~l~~~~p~~l~~~~~~~~~~~-~L~~L~Ls~N~l~~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L 490 (636)
T 4eco_A 413 EIGSVDGKNFDPLDPTPFKGI-NVSSINLSNNQISKFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLL 490 (636)
T ss_dssp CTTTTTTCSSCTTCSSCCCCC-CEEEEECCSSCCCSCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGC
T ss_pred cCCCcchhhhcccccccccCC-CCCEEECcCCccCcCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccCCc
Confidence 99998888877 554 7999999999999554455677999999999999998 555543 333 399
Q ss_pred CEEEccCCcccccCCcccc--cccccccccccCccceecCCcccccccce-eeec------ccCcccCCCCcCCCCCCCC
Q 041479 323 QVLSLFENNISREIPSSLG--NFTFLTELNLCGNSIRGSVPSALGSCHQL-WLDL------SHNHLTGPIPLAVGNPKSI 393 (771)
Q Consensus 323 ~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l-~L~L------s~N~l~~~~p~~~~~l~~L 393 (771)
+.|+|++|+++ .+|..+. .+++|++|+|++|+|++ +|..+..++.| .|+| ++|++.+.+|..+..+++|
T Consensus 491 ~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L 568 (636)
T 4eco_A 491 TSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSL 568 (636)
T ss_dssp CEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSC
T ss_pred cEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCC
Confidence 99999999999 7888887 99999999999999997 89999999999 8999 5688899999999999999
Q ss_pred CeEECCCCcccccCCcchhhhhcccccccEEECcCCCCCCCC
Q 041479 394 PHLDLSKNELSGEIPSSLAWIFGYISIFAKLNLSYNNLDGDV 435 (771)
Q Consensus 394 ~~L~Ls~N~l~~~~p~~l~~~~~~l~~L~~L~Ls~N~l~~~~ 435 (771)
++|+|++|+| +.+|..+. ++|+.|||++|++.+.-
T Consensus 569 ~~L~Ls~N~l-~~ip~~~~------~~L~~L~Ls~N~l~~~~ 603 (636)
T 4eco_A 569 TQLQIGSNDI-RKVNEKIT------PNISVLDIKDNPNISID 603 (636)
T ss_dssp CEEECCSSCC-CBCCSCCC------TTCCEEECCSCTTCEEE
T ss_pred CEEECCCCcC-CccCHhHh------CcCCEEECcCCCCcccc
Confidence 9999999999 58888642 78999999999987543
No 24
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=6e-42 Score=404.44 Aligned_cols=255 Identities=21% Similarity=0.201 Sum_probs=140.8
Q ss_pred CcEEEeecCcccccCCccccCCCCCCEEEccccccCCCCCcCcc------------------------------cccCCC
Q 041479 198 VRILLLAGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLD------------------------------SLVNCT 247 (771)
Q Consensus 198 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~------------------------------~l~~l~ 247 (771)
|+.|+|++|++++..|..|..+++|++|++++|++++..|..|. .+..++
T Consensus 250 L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~ 329 (680)
T 1ziw_A 250 LTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLK 329 (680)
T ss_dssp CCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCT
T ss_pred CCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCC
Confidence 66666666666666666666666666666666666655544331 223445
Q ss_pred CCcEEEccCccccccCChhhhhcc---------------------------cccceeecccCcCcccCcccccccCCcce
Q 041479 248 YLEVVSLSVNSLSGTLPNSLANFS---------------------------SHLRYLYMSANPISGSIPTEIGNLKNLII 300 (771)
Q Consensus 248 ~L~~L~Ls~N~l~~~~p~~~~~l~---------------------------~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 300 (771)
+|++|++++|++++..|..+..+. ++|+.|++++|++++..|..|..+++|+.
T Consensus 330 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~ 409 (680)
T 1ziw_A 330 CLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEV 409 (680)
T ss_dssp TCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCE
T ss_pred CCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCE
Confidence 566666666666544444443332 12333344444444444555555555555
Q ss_pred EecCCccceeccC-ccccCCCCCCEEEccCCcccccCCcccccccccccccccCccce--ecCCcccccccce-eeeccc
Q 041479 301 IAIEKFILIRNIP-ISVGYLLKLQVLSLFENNISREIPSSLGNFTFLTELNLCGNSIR--GSVPSALGSCHQL-WLDLSH 376 (771)
Q Consensus 301 L~l~~n~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~--~~~p~~~~~l~~l-~L~Ls~ 376 (771)
|++++|.+.+.+| ..+..+++|++|++++|++++..+..|..+++|+.|++++|.++ +..|..+..++.| .|++++
T Consensus 410 L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~ 489 (680)
T 1ziw_A 410 LDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSN 489 (680)
T ss_dssp EECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCS
T ss_pred EeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCC
Confidence 5555555554443 44555555555555555555555555555555555555555554 3455666666666 667777
Q ss_pred CcccCCCCcCCCCCCCCCeEECCCCcccccCCcchh----hhhcccccccEEECcCCCCCCCCCcc-c-ccccccccccc
Q 041479 377 NHLTGPIPLAVGNPKSIPHLDLSKNELSGEIPSSLA----WIFGYISIFAKLNLSYNNLDGDVPRK-M-IFKNASAISEA 450 (771)
Q Consensus 377 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~----~~~~~l~~L~~L~Ls~N~l~~~~p~~-~-~~~~~~~~~~~ 450 (771)
|++++..|..|..+++|++|+|++|++++..+..+. ..|..+++|+.|+|++|+++ .+|.. + ...++..+.+.
T Consensus 490 N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~-~i~~~~~~~l~~L~~L~Ls 568 (680)
T 1ziw_A 490 NNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFD-EIPVEVFKDLFELKIIDLG 568 (680)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECC
T ss_pred CCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCC-CCCHHHcccccCcceeECC
Confidence 776666666666667777777777766643221110 11346666777777777766 34432 1 23344555555
Q ss_pred CCC
Q 041479 451 GNE 453 (771)
Q Consensus 451 ~n~ 453 (771)
+|.
T Consensus 569 ~N~ 571 (680)
T 1ziw_A 569 LNN 571 (680)
T ss_dssp SSC
T ss_pred CCC
Confidence 553
No 25
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=9.7e-44 Score=371.26 Aligned_cols=230 Identities=20% Similarity=0.242 Sum_probs=190.2
Q ss_pred cccccccccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeE
Q 041479 522 DLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFR 598 (771)
Q Consensus 522 ~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 598 (771)
++.....+|+|++|+||+|+++.+++.||||++.... ....+.+.+|++++++++|||||++++++.+.+ ..
T Consensus 33 dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~-----~~ 107 (311)
T 4aw0_A 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDE-----KL 107 (311)
T ss_dssp GEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS-----EE
T ss_pred ccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC-----EE
Confidence 4555567999999999999999999999999997542 345678999999999999999999999998876 78
Q ss_pred EEEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCc
Q 041479 599 ALVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPE 675 (771)
Q Consensus 599 ~lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~ 675 (771)
|+|||||+||+|.++ .+.+++.++..|+.|++.||+|||+. +|+||||||+|||++.++.+||+|||+|+.+..
T Consensus 108 yivmEy~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~ 184 (311)
T 4aw0_A 108 YFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSP 184 (311)
T ss_dssp EEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcCCceecCC
Confidence 999999999999877 45699999999999999999999996 999999999999999999999999999997654
Q ss_pred ccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCc
Q 041479 676 VMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDP 740 (771)
Q Consensus 676 ~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 740 (771)
... .....+.+||+.||||| +||++|||++|+.||.+... ...+..+....+ ..++.+++
T Consensus 185 ~~~--~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~-~~~~~~i~~~~~--~~p~~~s~ 259 (311)
T 4aw0_A 185 ESK--QARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNE-GLIFAKIIKLEY--DFPEKFFP 259 (311)
T ss_dssp TTT--CCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHTCC--CCCTTCCH
T ss_pred CCC--cccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHcCCC--CCCcccCH
Confidence 322 12234568999999999 69999999999999975321 112333333332 33445667
Q ss_pred cccccCcccChhchhhcCCHHHHH
Q 041479 741 LFLVGGVQEGEETAEENIKKGQIR 764 (771)
Q Consensus 741 ~~~~~~~~cl~~~p~~Rpt~~~vl 764 (771)
.......+||++||++|||+.|+.
T Consensus 260 ~~~dli~~lL~~dp~~R~t~~e~~ 283 (311)
T 4aw0_A 260 KARDLVEKLLVLDATKRLGCEEME 283 (311)
T ss_dssp HHHHHHHHHSCSSGGGSTTSGGGT
T ss_pred HHHHHHHHHccCCHhHCcChHHHc
Confidence 777777799999999999998863
No 26
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=6.3e-44 Score=387.60 Aligned_cols=231 Identities=20% Similarity=0.271 Sum_probs=192.6
Q ss_pred ccccccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEE
Q 041479 521 KDLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRAL 600 (771)
Q Consensus 521 ~~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~l 600 (771)
..+.....+|+|++|+||+|+++.+++.||||++........+.+.+|+++|++++|||||++++++.+.+ ..||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~-----~~~i 225 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGD-----ELWV 225 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETT-----EEEE
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECC-----EEEE
Confidence 33445567999999999999999999999999998766556678999999999999999999999998877 7899
Q ss_pred EEEeccCCCCCCC--cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccC
Q 041479 601 VYEFMHHGSLESC--PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMS 678 (771)
Q Consensus 601 v~e~~~~g~L~~~--~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 678 (771)
|||||+||+|.++ ...+++.++..|+.|++.||+|||+. +||||||||+|||++.+|.+||+|||+|+.+.....
T Consensus 226 VmEy~~gG~L~~~i~~~~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~ 302 (423)
T 4fie_A 226 VMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP 302 (423)
T ss_dssp EEECCTTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCC
T ss_pred EEeCCCCCcHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCccceECCCCCc
Confidence 9999999999877 45689999999999999999999996 999999999999999999999999999987654322
Q ss_pred Ccccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCC--CchhhhcCcc
Q 041479 679 SNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALP--DQILQVLDPL 741 (771)
Q Consensus 679 ~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 741 (771)
...+.+||+.||||| +||++|||++|+.||.+.. ............+ ......+++.
T Consensus 303 ----~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~--~~~~~~~i~~~~~~~~~~~~~~s~~ 376 (423)
T 4fie_A 303 ----RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP--PLKAMKMIRDNLPPRLKNLHKVSPS 376 (423)
T ss_dssp ----CBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC--HHHHHHHHHHSCCCCCSCTTSSCHH
T ss_pred ----cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC--HHHHHHHHHcCCCCCCcccccCCHH
Confidence 233568999999999 6999999999999997532 1223333333333 2233456666
Q ss_pred ccccCcccChhchhhcCCHHHHHH
Q 041479 742 FLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 742 ~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
+..+..+||+.||++|||+.|+++
T Consensus 377 ~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 377 LKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp HHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred HHHHHHHHcCCChhHCcCHHHHhc
Confidence 777777999999999999999975
No 27
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=5.3e-43 Score=372.50 Aligned_cols=293 Identities=27% Similarity=0.451 Sum_probs=217.9
Q ss_pred CccHHHHHHHHhcCCCCCCCCCCCCCCCCCCcc--ceeeeecCCC--CcEEEEEcCCCCCcc--cCCccccCCCCCcEEE
Q 041479 1 EPDKQALLAFKSKVDDDPFGALSTWNDSVNFCQ--WLGVTCSLKY--QRVILLNLSGQNLTG--TASPYIGNLTFLRLIN 74 (771)
Q Consensus 1 ~~~~~~l~~~~~~~~~~~~~~~~~w~~~~~~c~--w~~v~c~~~~--~~l~~L~Ls~n~l~~--~~~~~~~~l~~L~~L~ 74 (771)
++|++||++||+++. ||. .+++|..+++||. |.||+|+... .+|+.|+|++|++++ .+|+.|..+++|++|+
T Consensus 5 ~~~~~aL~~~k~~~~-~~~-~l~~W~~~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~~L~ 82 (313)
T 1ogq_A 5 PQDKQALLQIKKDLG-NPT-TLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLY 82 (313)
T ss_dssp HHHHHHHHHHHHHTT-CCG-GGTTCCTTSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCSEEE
T ss_pred HHHHHHHHHHHHhcC-Ccc-cccCCCCCCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCCCeee
Confidence 368999999999984 565 7899988889998 9999998654 799999999999998 8899999999999999
Q ss_pred cCC-CcccccCCccccCCCCCCEEecccCcCcccCCcccccCCcccccCCccccCCCCCCEEecccccCcCCCCccceee
Q 041479 75 LQQ-NNFSSNIPHEIGRLFRLRHIIFNSNALQGQIPDSRLILNKLEGNIPSELGSLLKFKGLGLANNYFTGPIPHLNMFQ 153 (771)
Q Consensus 75 Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~L~~l~ 153 (771)
|++ |++.+.+|.+|+++++|++|+|++|+++ +.+|..|.++++|++|+|++|+|++
T Consensus 83 L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~--------------~~~p~~~~~l~~L~~L~Ls~N~l~~--------- 139 (313)
T 1ogq_A 83 IGGINNLVGPIPPAIAKLTQLHYLYITHTNVS--------------GAIPDFLSQIKTLVTLDFSYNALSG--------- 139 (313)
T ss_dssp EEEETTEESCCCGGGGGCTTCSEEEEEEECCE--------------EECCGGGGGCTTCCEEECCSSEEES---------
T ss_pred CCCCCcccccCChhHhcCCCCCEEECcCCeeC--------------CcCCHHHhCCCCCCEEeCCCCccCC---------
Confidence 995 9999889999999999999999999854 4667777778888888877776653
Q ss_pred ecccccccccCccccCCCCCCEEecccCcCcccCChhhhhCCC-CCcEEEeecCcccccCCccccCCCCCCEEEcccccc
Q 041479 154 VSVYSLTGSIPIQLLNITSMEYFHVSENQLVGELPPHIGFTLP-NVRILLLAGNQFFGNIPHSISNASKLEWLDFANNSL 232 (771)
Q Consensus 154 l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 232 (771)
.+|..+.++++|++|++++|+++|.+|..++ .++ +|+.|++++|++++.+|..|..++ |++|++++|++
T Consensus 140 --------~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~-~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l 209 (313)
T 1ogq_A 140 --------TLPPSISSLPNLVGITFDGNRISGAIPDSYG-SFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNML 209 (313)
T ss_dssp --------CCCGGGGGCTTCCEEECCSSCCEEECCGGGG-CCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEE
T ss_pred --------cCChHHhcCCCCCeEECcCCcccCcCCHHHh-hhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcc
Confidence 4566677777777777777777767776665 555 677777777777766676666665 67777777666
Q ss_pred CCCCCcCcccccCCCCCcEEEccCccccccCChhhhhcccccceeecccCcCcccCcccccccCCcceEecCCccceecc
Q 041479 233 TGLIPEDLDSLVNCTYLEVVSLSVNSLSGTLPNSLANFSSHLRYLYMSANPISGSIPTEIGNLKNLIIIAIEKFILIRNI 312 (771)
Q Consensus 233 ~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~ 312 (771)
++..|..| ..+++|+.|+|++|++++.+|. +..+++|+.|++++|.+.+.+
T Consensus 210 ~~~~~~~~---~~l~~L~~L~L~~N~l~~~~~~--------------------------~~~l~~L~~L~Ls~N~l~~~~ 260 (313)
T 1ogq_A 210 EGDASVLF---GSDKNTQKIHLAKNSLAFDLGK--------------------------VGLSKNLNGLDLRNNRIYGTL 260 (313)
T ss_dssp EECCGGGC---CTTSCCSEEECCSSEECCBGGG--------------------------CCCCTTCCEEECCSSCCEECC
T ss_pred cCcCCHHH---hcCCCCCEEECCCCceeeecCc--------------------------ccccCCCCEEECcCCcccCcC
Confidence 66655544 4555566666666655533332 334444555555555554555
Q ss_pred CccccCCCCCCEEEccCCcccccCCcccccccccccccccCcc-cee
Q 041479 313 PISVGYLLKLQVLSLFENNISREIPSSLGNFTFLTELNLCGNS-IRG 358 (771)
Q Consensus 313 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~ 358 (771)
|..+..+++|+.|+|++|++++.+|.. ..+++|+.|++++|+ +.|
T Consensus 261 p~~l~~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~~lc~ 306 (313)
T 1ogq_A 261 PQGLTQLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNKCLCG 306 (313)
T ss_dssp CGGGGGCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSSEEES
T ss_pred ChHHhcCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCCCccC
Confidence 666666677777777777777777765 777888888888887 444
No 28
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.6e-42 Score=398.89 Aligned_cols=400 Identities=17% Similarity=0.146 Sum_probs=274.7
Q ss_pred CcEEEEEcCCCCCcccCCccccCCCCCcEEEcCCCcccccCCccccCCCCCCEEecccCcCcccCCccc----------c
Q 041479 44 QRVILLNLSGQNLTGTASPYIGNLTFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNALQGQIPDSR----------L 113 (771)
Q Consensus 44 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~----------l 113 (771)
.+++.|||++|+++++.+.+|.++++|++|+|++|++++..|.+|+++++|++|+|++|++++..|..+ +
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccc
Confidence 579999999999998888899999999999999999998888899999999999999999774333221 3
Q ss_pred cCCcccccCCccccCCCCCCEEecccccCcC-C-------CCccceeeecccccccccCccccCCCCC----CEEecccC
Q 041479 114 ILNKLEGNIPSELGSLLKFKGLGLANNYFTG-P-------IPHLNMFQVSVYSLTGSIPIQLLNITSM----EYFHVSEN 181 (771)
Q Consensus 114 ~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~-------lp~L~~l~l~~n~l~~~~p~~~~~l~~L----~~L~Ls~N 181 (771)
..|++++..+..|+++++|++|++++|++++ . +++|+.|++++|.+++..|..+..+++| +.|++++|
T Consensus 108 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n 187 (570)
T 2z63_A 108 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 187 (570)
T ss_dssp TTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTC
T ss_pred cccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCC
Confidence 3344443333345555555555555555442 1 2335555555555555444445554444 45555555
Q ss_pred cCcccCChhhhhCCCCCcEEEeecC-------------------------------------------------------
Q 041479 182 QLVGELPPHIGFTLPNVRILLLAGN------------------------------------------------------- 206 (771)
Q Consensus 182 ~l~g~lp~~~~~~l~~L~~L~L~~N------------------------------------------------------- 206 (771)
.++ .+++..+ ...+|+.|++++|
T Consensus 188 ~l~-~~~~~~~-~~~~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~ 265 (570)
T 2z63_A 188 PMN-FIQPGAF-KEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLA 265 (570)
T ss_dssp CCC-EECTTTT-TTCEEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEE
T ss_pred Cce-ecCHHHh-ccCcceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhh
Confidence 555 2333333 2224555555554
Q ss_pred ---cccccCCccccCCCCCCEEEccccccCCCCCcCcccccCCCCCcEEEccCccccccCChhh----------------
Q 041479 207 ---QFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSLSGTLPNSL---------------- 267 (771)
Q Consensus 207 ---~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~---------------- 267 (771)
.+.+..|..|..+++|+.|++++|.+++ +|..+ ..+ +|+.|++++|.+. .+|...
T Consensus 266 ~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~-l~~~~---~~~-~L~~L~l~~n~~~-~l~~~~l~~L~~L~l~~n~~~~ 339 (570)
T 2z63_A 266 YLDYYLDDIIDLFNCLTNVSSFSLVSVTIER-VKDFS---YNF-GWQHLELVNCKFG-QFPTLKLKSLKRLTFTSNKGGN 339 (570)
T ss_dssp ETTEEESCSTTTTGGGTTCSEEEEESCEECS-CCBCC---SCC-CCSEEEEESCBCS-SCCBCBCSSCCEEEEESCBSCC
T ss_pred cchhhhhhchhhhcCcCcccEEEecCccchh-hhhhh---ccC-CccEEeeccCccc-ccCcccccccCEEeCcCCcccc
Confidence 2334455666777888888888888875 44444 333 5555555555554 333211
Q ss_pred ----hhcccccceeecccCcCcccC--cccccccCCcceEecCCccceeccCccccCCCCCCEEEccCCcccccCC-ccc
Q 041479 268 ----ANFSSHLRYLYMSANPISGSI--PTEIGNLKNLIIIAIEKFILIRNIPISVGYLLKLQVLSLFENNISREIP-SSL 340 (771)
Q Consensus 268 ----~~l~~~L~~L~Ls~N~l~~~~--p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~ 340 (771)
..+ ++|++|++++|++++.. |..+.++++|+.|++++|.+.+..+. +..+++|+.|++++|++++..| ..+
T Consensus 340 ~~~~~~~-~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~ 417 (570)
T 2z63_A 340 AFSEVDL-PSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVF 417 (570)
T ss_dssp BCCCCBC-TTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTT
T ss_pred ccccccC-CCCCEEeCcCCccCccccccccccccCccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhh
Confidence 223 36777777777777543 56677788888888888877665444 7788888888888888876655 467
Q ss_pred ccccccccccccCccceecCCcccccccce-eeecccCccc-CCCCcCCCCCCCCCeEECCCCcccccCCcchhhhhccc
Q 041479 341 GNFTFLTELNLCGNSIRGSVPSALGSCHQL-WLDLSHNHLT-GPIPLAVGNPKSIPHLDLSKNELSGEIPSSLAWIFGYI 418 (771)
Q Consensus 341 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l-~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~l 418 (771)
..+++|++|++++|.+.+..|..+..++.| .|++++|+++ +.+|..|..+++|++|+|++|++++..|..+. .+
T Consensus 418 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~----~l 493 (570)
T 2z63_A 418 LSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFN----SL 493 (570)
T ss_dssp TTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTT----TC
T ss_pred hcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhh----cc
Confidence 788888888888888888888888888888 7888888887 56788888888888888888888877777654 77
Q ss_pred ccccEEECcCCCCCCCCCccc-cccccccccccCCCcccC
Q 041479 419 SIFAKLNLSYNNLDGDVPRKM-IFKNASAISEAGNEKLCG 457 (771)
Q Consensus 419 ~~L~~L~Ls~N~l~~~~p~~~-~~~~~~~~~~~~n~~lc~ 457 (771)
++|+.|++++|++++..|..+ ...++..+.+.+|+..|.
T Consensus 494 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 533 (570)
T 2z63_A 494 SSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCS 533 (570)
T ss_dssp TTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred cCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCC
Confidence 888888888888887666533 345667777888877764
No 29
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=2.5e-42 Score=416.17 Aligned_cols=383 Identities=19% Similarity=0.191 Sum_probs=298.6
Q ss_pred CCcEEEEEcCCCCCcccC-CccccCCCCCcEEEcCCCcccccCCccccCCCCCCEEecccCcCcccCCcc----------
Q 041479 43 YQRVILLNLSGQNLTGTA-SPYIGNLTFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNALQGQIPDS---------- 111 (771)
Q Consensus 43 ~~~l~~L~Ls~n~l~~~~-~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~---------- 111 (771)
..+++.|||++|+..+.+ |.+|.++++|++|+|++|+|++..|.+|+++++|++|+|++|.+++.+|..
T Consensus 47 l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~ 126 (844)
T 3j0a_A 47 LEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALT 126 (844)
T ss_dssp CCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCC
T ss_pred cccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCC
Confidence 356677777777544433 556777777777777777777666777777777777777777766544332
Q ss_pred --cccCCcccccCC-ccccCCCCCCEEecccccCcCC--------------------------CC-------------cc
Q 041479 112 --RLILNKLEGNIP-SELGSLLKFKGLGLANNYFTGP--------------------------IP-------------HL 149 (771)
Q Consensus 112 --~l~~n~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~--------------------------lp-------------~L 149 (771)
.+..|.+++..+ ..|+++++|+.|+|++|.+++. .| .|
T Consensus 127 ~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L 206 (844)
T 3j0a_A 127 RLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVL 206 (844)
T ss_dssp EEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCB
T ss_pred EEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECCCCccccccccchhhcCCccccCce
Confidence 144555655443 4567777777777777766432 11 16
Q ss_pred ceeeecccccccccCccccC--------------------------------------CCCCCEEecccCcCcccCChhh
Q 041479 150 NMFQVSVYSLTGSIPIQLLN--------------------------------------ITSMEYFHVSENQLVGELPPHI 191 (771)
Q Consensus 150 ~~l~l~~n~l~~~~p~~~~~--------------------------------------l~~L~~L~Ls~N~l~g~lp~~~ 191 (771)
+.++++.|.+++..|..+.. .++|+.|++++|.+++ +++..
T Consensus 207 ~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~-~~~~~ 285 (844)
T 3j0a_A 207 EILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFS-LNSRV 285 (844)
T ss_dssp SEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCE-ECSCC
T ss_pred eEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhccccCCccEEECCCCcccc-cChhh
Confidence 78888888777655544432 2689999999999995 44444
Q ss_pred hhCCCCCcEEEeecCcccccCCccccCCCCCCEEEccccccCCCCCcCcccccCCCCCcEEEccCccccccCChhhhhcc
Q 041479 192 GFTLPNVRILLLAGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSLSGTLPNSLANFS 271 (771)
Q Consensus 192 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 271 (771)
+..+++|+.|+|++|+|++..|..|.++++|++|+|++|++++..|..| .++++|+.|++++|++++..+..+..+.
T Consensus 286 ~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~---~~l~~L~~L~L~~N~i~~~~~~~~~~l~ 362 (844)
T 3j0a_A 286 FETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNF---YGLPKVAYIDLQKNHIAIIQDQTFKFLE 362 (844)
T ss_dssp SSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSC---SSCTTCCEEECCSCCCCCCCSSCSCSCC
T ss_pred hhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHh---cCCCCCCEEECCCCCCCccChhhhcCCC
Confidence 5589999999999999999999999999999999999999999888777 7889999999999999966666676665
Q ss_pred cccceeecccCcCcccC------------------cc----------------------cccccCCcceEecCCccceec
Q 041479 272 SHLRYLYMSANPISGSI------------------PT----------------------EIGNLKNLIIIAIEKFILIRN 311 (771)
Q Consensus 272 ~~L~~L~Ls~N~l~~~~------------------p~----------------------~~~~l~~L~~L~l~~n~l~~~ 311 (771)
+|++|+|++|.+++.. |. .+.++++|+.|++++|.+.+.
T Consensus 363 -~L~~L~Ls~N~l~~i~~~~~L~~L~l~~N~l~~l~~~~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~ 441 (844)
T 3j0a_A 363 -KLQTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSC 441 (844)
T ss_dssp -CCCEEEEETCCSCCCSSCCSCSEEEEESCCCCCCCCCCTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCC
T ss_pred -CCCEEECCCCCCCcccCCCCcchhccCCCCcccccccccccceeecccCccccCchhhhhhcCCccceeeCCCCccccc
Confidence 7999999999887421 11 134788999999999999765
Q ss_pred cCc-cccCCCCCCEEEccCCccc-----ccCCcccccccccccccccCccceecCCcccccccce-eeecccCcccCCCC
Q 041479 312 IPI-SVGYLLKLQVLSLFENNIS-----REIPSSLGNFTFLTELNLCGNSIRGSVPSALGSCHQL-WLDLSHNHLTGPIP 384 (771)
Q Consensus 312 ~p~-~~~~l~~L~~L~Ls~N~l~-----~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l-~L~Ls~N~l~~~~p 384 (771)
.+. .+..+++|+.|+|++|.++ +..+..|.++++|+.|+|++|+|++.+|..|..++.| .|+|++|+|++..|
T Consensus 442 ~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~ 521 (844)
T 3j0a_A 442 SGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSH 521 (844)
T ss_dssp CSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCC
T ss_pred ccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCccCh
Confidence 443 4567899999999999997 4445678999999999999999999999999999999 99999999998888
Q ss_pred cCCCCCCCCCeEECCCCcccccCCcchhhhhcccccccEEECcCCCCCCCCCccc
Q 041479 385 LAVGNPKSIPHLDLSKNELSGEIPSSLAWIFGYISIFAKLNLSYNNLDGDVPRKM 439 (771)
Q Consensus 385 ~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 439 (771)
..+. ++|+.|+|++|+|++.+|..+ .+|+.|++++|++.|.++-.+
T Consensus 522 ~~~~--~~L~~L~Ls~N~l~~~~~~~~-------~~L~~l~l~~Np~~C~c~~~~ 567 (844)
T 3j0a_A 522 NDLP--ANLEILDISRNQLLAPNPDVF-------VSLSVLDITHNKFICECELST 567 (844)
T ss_dssp CCCC--SCCCEEEEEEECCCCCCSCCC-------SSCCEEEEEEECCCCSSSCCS
T ss_pred hhhh--ccccEEECCCCcCCCCChhHh-------CCcCEEEecCCCcccccccHH
Confidence 8776 899999999999999888753 478999999999999888543
No 30
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=5.4e-43 Score=360.75 Aligned_cols=226 Identities=22% Similarity=0.235 Sum_probs=173.8
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRA 599 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 599 (771)
+.....+|+|++|+||+|+++.+++.||||++.... ....+++.+|++++++++|||||++++++.+.+ ..|
T Consensus 15 Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~-----~~~ 89 (275)
T 3hyh_A 15 YQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKD-----EII 89 (275)
T ss_dssp CEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSS-----EEE
T ss_pred eEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECC-----EEE
Confidence 444557899999999999999999999999996542 344578999999999999999999999998876 789
Q ss_pred EEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcc
Q 041479 600 LVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676 (771)
Q Consensus 600 lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~ 676 (771)
+||||| +|+|.++ ...+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+|+.....
T Consensus 90 ivmEy~-~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~ 165 (275)
T 3hyh_A 90 MVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDG 165 (275)
T ss_dssp EEEECC-CEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSSCC------
T ss_pred EEEeCC-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecCCCeecCCC
Confidence 999999 6788665 45799999999999999999999996 9999999999999999999999999999865442
Q ss_pred cCCcccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCc
Q 041479 677 MSSNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDP 740 (771)
Q Consensus 677 ~~~~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 740 (771)
. ...+.+||+.||||| +||++|||+||+.||.+... ...+..+.... ...++.+++
T Consensus 166 ~-----~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~-~~~~~~i~~~~--~~~p~~~s~ 237 (275)
T 3hyh_A 166 N-----FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI-PVLFKNISNGV--YTLPKFLSP 237 (275)
T ss_dssp --------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHTC--CCCCTTSCH
T ss_pred C-----ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCH-HHHHHHHHcCC--CCCCCCCCH
Confidence 2 223467999999999 69999999999999975321 11122222222 233455677
Q ss_pred cccccCcccChhchhhcCCHHHHHH
Q 041479 741 LFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 741 ~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
.+.....+||++||++|||+.|+++
T Consensus 238 ~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 238 GAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp HHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHccCChhHCcCHHHHHc
Confidence 7777778999999999999999986
No 31
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.3e-41 Score=393.06 Aligned_cols=388 Identities=19% Similarity=0.197 Sum_probs=304.4
Q ss_pred CCCcEEEEEcCCCCCcccCCccccCCCCCcEEEcCCCcccccCCccccCCCCCCEEecccCcCcccCCc----------c
Q 041479 42 KYQRVILLNLSGQNLTGTASPYIGNLTFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNALQGQIPD----------S 111 (771)
Q Consensus 42 ~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~----------~ 111 (771)
..++++.|||++|+++++.+..|.++++|++|+|++|++++..|.+|+++++|++|++++|++++..+. .
T Consensus 50 ~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L 129 (570)
T 2z63_A 50 SFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKEL 129 (570)
T ss_dssp TCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEE
T ss_pred CCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccccccccccCCCccccccccccEE
Confidence 347899999999999988888999999999999999999988889999999999999999998853331 2
Q ss_pred cccCCcccc-cCCccccCCCCCCEEecccccCcCCCC-------cc----ceeeecccccccccCccccCCCCCCEEecc
Q 041479 112 RLILNKLEG-NIPSELGSLLKFKGLGLANNYFTGPIP-------HL----NMFQVSVYSLTGSIPIQLLNITSMEYFHVS 179 (771)
Q Consensus 112 ~l~~n~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~lp-------~L----~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls 179 (771)
.+..|.+++ .+|..|+++++|+.|++++|++++..+ .| ..++++.|.+++..|..+..+ +|+.|+++
T Consensus 130 ~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~-~L~~L~l~ 208 (570)
T 2z63_A 130 NVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLHKLTLR 208 (570)
T ss_dssp ECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEE
T ss_pred ecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCCCceecCHHHhccC-cceeEecc
Confidence 366677776 479999999999999999999985433 24 677888887776655544433 44455444
Q ss_pred cC----------------------------------------------------------cCcccCChhhhhCCCCCcEE
Q 041479 180 EN----------------------------------------------------------QLVGELPPHIGFTLPNVRIL 201 (771)
Q Consensus 180 ~N----------------------------------------------------------~l~g~lp~~~~~~l~~L~~L 201 (771)
+| .+.+.+|..+. .+++|+.|
T Consensus 209 ~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~-~l~~L~~L 287 (570)
T 2z63_A 209 NNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFN-CLTNVSSF 287 (570)
T ss_dssp SCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEEETTEEESCSTTTTG-GGTTCSEE
T ss_pred cccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhhcchhhhhhchhhhc-CcCcccEE
Confidence 44 11122222222 44555555
Q ss_pred EeecCcccccCCccccCCCCCCEEEccccccCCCCCcCccc----------------ccCCCCCcEEEccCccccccC--
Q 041479 202 LLAGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDS----------------LVNCTYLEVVSLSVNSLSGTL-- 263 (771)
Q Consensus 202 ~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~----------------l~~l~~L~~L~Ls~N~l~~~~-- 263 (771)
++++|.++ .+|..+..+ +|+.|++++|.++.+.+..+.. ...+++|+.|++++|++++..
T Consensus 288 ~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~~l~~~~l~~L~~L~l~~n~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~ 365 (570)
T 2z63_A 288 SLVSVTIE-RVKDFSYNF-GWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCC 365 (570)
T ss_dssp EEESCEEC-SCCBCCSCC-CCSEEEEESCBCSSCCBCBCSSCCEEEEESCBSCCBCCCCBCTTCCEEECCSSCCBEEEEE
T ss_pred EecCccch-hhhhhhccC-CccEEeeccCcccccCcccccccCEEeCcCCccccccccccCCCCCEEeCcCCccCccccc
Confidence 55555554 344444444 5555555555444222211110 156789999999999998543
Q ss_pred ChhhhhcccccceeecccCcCcccCcccccccCCcceEecCCccceeccC-ccccCCCCCCEEEccCCcccccCCccccc
Q 041479 264 PNSLANFSSHLRYLYMSANPISGSIPTEIGNLKNLIIIAIEKFILIRNIP-ISVGYLLKLQVLSLFENNISREIPSSLGN 342 (771)
Q Consensus 264 p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 342 (771)
|..+..+. +|++|++++|.+++..+. |..+++|+.|++++|.+.+..| ..+..+++|++|++++|++++..|..|..
T Consensus 366 ~~~~~~~~-~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 443 (570)
T 2z63_A 366 SQSDFGTT-SLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNG 443 (570)
T ss_dssp EHHHHTCS-CCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTT
T ss_pred cccccccC-ccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhc
Confidence 67777776 899999999999965554 9999999999999999988766 57899999999999999999999999999
Q ss_pred ccccccccccCccce-ecCCcccccccce-eeecccCcccCCCCcCCCCCCCCCeEECCCCcccccCCcchhhhhccccc
Q 041479 343 FTFLTELNLCGNSIR-GSVPSALGSCHQL-WLDLSHNHLTGPIPLAVGNPKSIPHLDLSKNELSGEIPSSLAWIFGYISI 420 (771)
Q Consensus 343 l~~L~~L~Ls~N~l~-~~~p~~~~~l~~l-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~l~~ 420 (771)
+++|++|++++|+++ +.+|..+..++.| .|++++|++++..|..|..+++|++|++++|++++..|..+. .+++
T Consensus 444 l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~----~l~~ 519 (570)
T 2z63_A 444 LSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFD----RLTS 519 (570)
T ss_dssp CTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTT----TCTT
T ss_pred CCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhh----cccC
Confidence 999999999999998 5789999999999 999999999999899999999999999999999987777654 8999
Q ss_pred ccEEECcCCCCCCCCCccc
Q 041479 421 FAKLNLSYNNLDGDVPRKM 439 (771)
Q Consensus 421 L~~L~Ls~N~l~~~~p~~~ 439 (771)
|+.|++++|+++|.+|...
T Consensus 520 L~~L~l~~N~~~~~~~~~~ 538 (570)
T 2z63_A 520 LQKIWLHTNPWDCSCPRID 538 (570)
T ss_dssp CCEEECCSSCBCCCTTTTH
T ss_pred CcEEEecCCcccCCCcchH
Confidence 9999999999999999754
No 32
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=3.9e-42 Score=408.04 Aligned_cols=345 Identities=20% Similarity=0.272 Sum_probs=298.7
Q ss_pred CCccccCCCCCcEEEcCCCcccc-----------------cCCcccc--CCCCCCEEecccCcCcccCCcccccCCcccc
Q 041479 60 ASPYIGNLTFLRLINLQQNNFSS-----------------NIPHEIG--RLFRLRHIIFNSNALQGQIPDSRLILNKLEG 120 (771)
Q Consensus 60 ~~~~~~~l~~L~~L~Ls~N~l~~-----------------~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~l~~n~l~~ 120 (771)
+|+.|+++++|++|+|++|+|++ .+|..++ ++++|++|+|++|.+. +
T Consensus 440 IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~--------------~ 505 (876)
T 4ecn_A 440 ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNM--------------T 505 (876)
T ss_dssp ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTC--------------C
T ss_pred hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCC--------------c
Confidence 78889999999999999999998 3899987 9999999999999955 5
Q ss_pred cCCccccCCCCCCEEeccccc-CcC-CC--------------CccceeeecccccccccCc--cccCCCCCCEEecccCc
Q 041479 121 NIPSELGSLLKFKGLGLANNY-FTG-PI--------------PHLNMFQVSVYSLTGSIPI--QLLNITSMEYFHVSENQ 182 (771)
Q Consensus 121 ~~p~~~~~l~~L~~L~Ls~N~-l~~-~l--------------p~L~~l~l~~n~l~~~~p~--~~~~l~~L~~L~Ls~N~ 182 (771)
.+|..|+++++|+.|+|++|+ |++ .+ |.|+.|++++|.++ .+|. .+.++++|+.|+|++|+
T Consensus 506 ~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~ 584 (876)
T 4ecn_A 506 QLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNK 584 (876)
T ss_dssp SCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSC
T ss_pred cChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCC
Confidence 788899999999999999998 876 33 37999999999999 8888 89999999999999999
Q ss_pred CcccCChhhhhCCCCCcEEEeecCcccccCCccccCCCC-CCEEEccccccCCCCCcCcccccCCCCCcEEEccCccccc
Q 041479 183 LVGELPPHIGFTLPNVRILLLAGNQFFGNIPHSISNASK-LEWLDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSLSG 261 (771)
Q Consensus 183 l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~-L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~ 261 (771)
++ .+| .+. .+++|+.|+|++|+|+ .+|..|..+++ |+.|+|++|+|+ .+|..+.. ...++|+.|+|++|++++
T Consensus 585 l~-~lp-~~~-~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~-~~~~~L~~L~Ls~N~l~g 658 (876)
T 4ecn_A 585 VR-HLE-AFG-TNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNA-KSVYVMGSVDFSYNKIGS 658 (876)
T ss_dssp CC-BCC-CCC-TTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCT-TCSSCEEEEECCSSCTTT
T ss_pred cc-cch-hhc-CCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhc-cccCCCCEEECcCCcCCC
Confidence 99 999 554 8999999999999999 78889999999 999999999999 55766522 223459999999999998
Q ss_pred cCChhh---h--hcccccceeecccCcCcccCccc-ccccCCcceEecCCccceeccCccccCC--------CCCCEEEc
Q 041479 262 TLPNSL---A--NFSSHLRYLYMSANPISGSIPTE-IGNLKNLIIIAIEKFILIRNIPISVGYL--------LKLQVLSL 327 (771)
Q Consensus 262 ~~p~~~---~--~l~~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~l~~n~l~~~~p~~~~~l--------~~L~~L~L 327 (771)
.+|... . .. .+|+.|+|++|+|+. +|.. +..+++|+.|++++|.+. .+|..+... ++|+.|+|
T Consensus 659 ~ip~l~~~l~~~~~-~~L~~L~Ls~N~L~~-lp~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~L 735 (876)
T 4ecn_A 659 EGRNISCSMDDYKG-INASTVTLSYNEIQK-FPTELFATGSPISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDL 735 (876)
T ss_dssp TSSSCSSCTTTCCC-CCEEEEECCSSCCCS-CCHHHHHTTCCCSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEEC
T ss_pred ccccchhhhccccC-CCcCEEEccCCcCCc-cCHHHHccCCCCCEEECCCCcCC-ccChHHhccccccccccCCccEEEC
Confidence 766322 2 22 279999999999994 5554 568999999999999997 566654432 39999999
Q ss_pred cCCcccccCCcccc--cccccccccccCccceecCCcccccccce-eeeccc------CcccCCCCcCCCCCCCCCeEEC
Q 041479 328 FENNISREIPSSLG--NFTFLTELNLCGNSIRGSVPSALGSCHQL-WLDLSH------NHLTGPIPLAVGNPKSIPHLDL 398 (771)
Q Consensus 328 s~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l-~L~Ls~------N~l~~~~p~~~~~l~~L~~L~L 398 (771)
++|+|+ .+|..+. .+++|+.|+|++|+|++ +|..+..++.| .|+|++ |++.+.+|..|..+++|+.|+|
T Consensus 736 s~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~L~Ls~N~~ls~N~l~~~ip~~l~~L~~L~~L~L 813 (876)
T 4ecn_A 736 RFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKAFGIRHQRDAEGNRILRQWPTGITTCPSLIQLQI 813 (876)
T ss_dssp CSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCEEECCCCBCTTCCBCCCCCCTTGGGCSSCCEEEC
T ss_pred CCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCEEECCCCCCcccccccccChHHHhcCCCCCEEEC
Confidence 999999 7888887 99999999999999997 78889999999 899976 8899999999999999999999
Q ss_pred CCCcccccCCcchhhhhcccccccEEECcCCCCCCCCCc
Q 041479 399 SKNELSGEIPSSLAWIFGYISIFAKLNLSYNNLDGDVPR 437 (771)
Q Consensus 399 s~N~l~~~~p~~l~~~~~~l~~L~~L~Ls~N~l~~~~p~ 437 (771)
++|+| +.+|..+. ++|+.|||++|++...-+.
T Consensus 814 s~N~L-~~Ip~~l~------~~L~~LdLs~N~l~~i~~~ 845 (876)
T 4ecn_A 814 GSNDI-RKVDEKLT------PQLYILDIADNPNISIDVT 845 (876)
T ss_dssp CSSCC-CBCCSCCC------SSSCEEECCSCTTCEEECG
T ss_pred CCCCC-CccCHhhc------CCCCEEECCCCCCCccChH
Confidence 99999 68888743 6899999999999755444
No 33
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.1e-40 Score=380.84 Aligned_cols=381 Identities=18% Similarity=0.232 Sum_probs=212.9
Q ss_pred CcEEEEEcCCCCCcccCCccccCCCCCcEEEcCCCcccccCCccccCCCCCCEEecccCcCcccCCcccccCCcccccCC
Q 041479 44 QRVILLNLSGQNLTGTASPYIGNLTFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNALQGQIPDSRLILNKLEGNIP 123 (771)
Q Consensus 44 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~l~~n~l~~~~p 123 (771)
++++.|+|++|++++..|..|..+++|++|+|++|+|++..|.+|+++++|++|+|++|+++ .+|
T Consensus 21 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~---------------~lp 85 (520)
T 2z7x_B 21 QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLV---------------KIS 85 (520)
T ss_dssp TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCC---------------EEE
T ss_pred ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCCcee---------------ecC
Confidence 45555555555555555555555555555555555555555555555555555555555544 222
Q ss_pred ccccCCCCCCEEecccccCcC-C-------CCccceeeecccccccccCccccCCCCC--CEEecccCcC--cccCChhh
Q 041479 124 SELGSLLKFKGLGLANNYFTG-P-------IPHLNMFQVSVYSLTGSIPIQLLNITSM--EYFHVSENQL--VGELPPHI 191 (771)
Q Consensus 124 ~~~~~l~~L~~L~Ls~N~l~~-~-------lp~L~~l~l~~n~l~~~~p~~~~~l~~L--~~L~Ls~N~l--~g~lp~~~ 191 (771)
.. .+++|++|+|++|++++ . ++.|+.|+++.|.+++ ..+..+++| ++|++++|.+ .+..|..+
T Consensus 86 ~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l 160 (520)
T 2z7x_B 86 CH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYGEKEDPEGL 160 (520)
T ss_dssp CC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTTSSCCTTTT
T ss_pred cc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccccccccccc
Confidence 22 45556666666665543 1 2235555555555554 234444444 5555555555 33333332
Q ss_pred hh-------------------------CCCCCcEEEeecCc-------ccccCCccccCCC-------------------
Q 041479 192 GF-------------------------TLPNVRILLLAGNQ-------FFGNIPHSISNAS------------------- 220 (771)
Q Consensus 192 ~~-------------------------~l~~L~~L~L~~N~-------l~~~~p~~~~~l~------------------- 220 (771)
.. .+++|+.|++++|. +.+.+| .|..++
T Consensus 161 ~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~l~~~~~~~ 239 (520)
T 2z7x_B 161 QDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIETTWNSFIR 239 (520)
T ss_dssp TTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEEEEHHHHHH
T ss_pred cccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhccccccccCHHHHHH
Confidence 21 13334444444433 222222 222222
Q ss_pred --------CCCEEEccccccCCCCCcCcccc--cCCCCCcEEEccCccccccCC-hhhhhcc--cccceeecccCcCccc
Q 041479 221 --------KLEWLDFANNSLTGLIPEDLDSL--VNCTYLEVVSLSVNSLSGTLP-NSLANFS--SHLRYLYMSANPISGS 287 (771)
Q Consensus 221 --------~L~~L~Ls~N~l~~~~p~~~~~l--~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~--~~L~~L~Ls~N~l~~~ 287 (771)
+|++|++++|++++.+|..+..+ .++++|+.+++++|.+ .+| ..+..+. .+|+.|++++|.+...
T Consensus 240 ~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~~~~~~~~L~~L~l~~n~l~~~ 317 (520)
T 2z7x_B 240 ILQLVWHTTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIYEIFSNMNIKNFTVSGTRMVHM 317 (520)
T ss_dssp HHHHHHTSSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHHHHHHTCCCSEEEEESSCCCCC
T ss_pred HHHHhhhCcccEEEeecccccCccccchhhcccccCceeEeccccccce--ecchhhhhcccccCceeEEEcCCCccccc
Confidence 45555555555554444433111 3445555555555555 333 2232220 1355555655555422
Q ss_pred CcccccccCCcceEecCCccceeccCccccCCCCCCEEEccCCcccc--cCCcccccccccccccccCccceecCC-ccc
Q 041479 288 IPTEIGNLKNLIIIAIEKFILIRNIPISVGYLLKLQVLSLFENNISR--EIPSSLGNFTFLTELNLCGNSIRGSVP-SAL 364 (771)
Q Consensus 288 ~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~ 364 (771)
. .+..+++|+.|++++|.+.+.+|..+..+++|++|++++|++++ .+|..+..+++|++|++++|++++.+| ..+
T Consensus 318 ~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~ 395 (520)
T 2z7x_B 318 L--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDC 395 (520)
T ss_dssp C--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSC
T ss_pred c--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchh
Confidence 1 12567777777777777777777777777777777777777765 345667777777777777777776343 346
Q ss_pred ccccce-eeecccCcccCCCCcCCCCCCCCCeEECCCCcccccCCcchhhhhcccccccEEECcCCCCCCCCCcc-c-cc
Q 041479 365 GSCHQL-WLDLSHNHLTGPIPLAVGNPKSIPHLDLSKNELSGEIPSSLAWIFGYISIFAKLNLSYNNLDGDVPRK-M-IF 441 (771)
Q Consensus 365 ~~l~~l-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~l~~L~~L~Ls~N~l~~~~p~~-~-~~ 441 (771)
..++.| .|++++|++++..|..+. ++|++|+|++|+|+ .+|..+. .+++|+.|+|++|+|+ .+|.. + ..
T Consensus 396 ~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~----~l~~L~~L~L~~N~l~-~l~~~~~~~l 467 (520)
T 2z7x_B 396 SWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVV----KLEALQELNVASNQLK-SVPDGIFDRL 467 (520)
T ss_dssp CCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGG----GCTTCCEEECCSSCCC-CCCTTTTTTC
T ss_pred ccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhh----cCCCCCEEECCCCcCC-ccCHHHhccC
Confidence 666667 677777777766666553 67777777777777 6666543 6677777777777777 34443 1 24
Q ss_pred cccccccccCCCcccC
Q 041479 442 KNASAISEAGNEKLCG 457 (771)
Q Consensus 442 ~~~~~~~~~~n~~lc~ 457 (771)
.++..+.+.+|+..|.
T Consensus 468 ~~L~~L~l~~N~~~c~ 483 (520)
T 2z7x_B 468 TSLQKIWLHTNPWDCS 483 (520)
T ss_dssp TTCCEEECCSSCBCCC
T ss_pred CcccEEECcCCCCccc
Confidence 4556666777776663
No 34
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=2.9e-40 Score=386.49 Aligned_cols=417 Identities=19% Similarity=0.192 Sum_probs=283.6
Q ss_pred CCCCCCCCC----CCCccce----eeeecCCC---------CcEEEEEcCCCCCcccCCccccCCCCCcEEEcCCCcccc
Q 041479 20 GALSTWNDS----VNFCQWL----GVTCSLKY---------QRVILLNLSGQNLTGTASPYIGNLTFLRLINLQQNNFSS 82 (771)
Q Consensus 20 ~~~~~w~~~----~~~c~w~----~v~c~~~~---------~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 82 (771)
..+++|... -++|.|. .+.|.... ..++.|||++|+|+++.+.+|.++++|++|||++|+|++
T Consensus 11 ~~~~~~~~~~p~~~~~c~~~~~~~~~~c~~~~l~~vP~~lp~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~ 90 (635)
T 4g8a_A 11 DKLAAANSSIPESWEPCVEVVPNITYQCMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQT 90 (635)
T ss_dssp --------------CCSEEEETTTEEECTTSCCSSCCSSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCE
T ss_pred chhhcccCCCCCCCCCccccCCCCEEECCCCCcCccCCCCCcCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCC
Confidence 345555432 2456543 36786432 478999999999998888899999999999999999999
Q ss_pred cCCccccCCCCCCEEecccCcCcccCCcccccCCcccccCCccccCCCCCCEEecccccCcC-------CCCccceeeec
Q 041479 83 NIPHEIGRLFRLRHIIFNSNALQGQIPDSRLILNKLEGNIPSELGSLLKFKGLGLANNYFTG-------PIPHLNMFQVS 155 (771)
Q Consensus 83 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-------~lp~L~~l~l~ 155 (771)
+.|++|+++++|++|+|++|+|++. .+..|.++++|++|+|++|+|++ .++.|+.|+++
T Consensus 91 i~~~~f~~L~~L~~L~Ls~N~l~~l--------------~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls 156 (635)
T 4g8a_A 91 IEDGAYQSLSHLSTLILTGNPIQSL--------------ALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVA 156 (635)
T ss_dssp ECTTTTTTCTTCCEEECTTCCCCEE--------------CGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECC
T ss_pred cChhHhcCCCCCCEEEccCCcCCCC--------------CHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccc
Confidence 8888999999999999999998742 23345555555555555555542 22335555555
Q ss_pred cccccc-ccCccccCCCCCCEEecccCcCccc---------------------------CChhhhhCCCCCcEEEeecCc
Q 041479 156 VYSLTG-SIPIQLLNITSMEYFHVSENQLVGE---------------------------LPPHIGFTLPNVRILLLAGNQ 207 (771)
Q Consensus 156 ~n~l~~-~~p~~~~~l~~L~~L~Ls~N~l~g~---------------------------lp~~~~~~l~~L~~L~L~~N~ 207 (771)
+|.+++ ..|..+.++++|++|++++|++++. +++..+ ....++.+++.+|.
T Consensus 157 ~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~-~~~~~~~l~l~~n~ 235 (635)
T 4g8a_A 157 HNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAF-KEIRLHKLTLRNNF 235 (635)
T ss_dssp SSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTT-TTCEEEEEEEESCC
T ss_pred cCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccccCcccc-cchhhhhhhhhccc
Confidence 555543 2344455555555555555555422 222211 11112223332221
Q ss_pred cccc----------------------------------------------------------------------------
Q 041479 208 FFGN---------------------------------------------------------------------------- 211 (771)
Q Consensus 208 l~~~---------------------------------------------------------------------------- 211 (771)
....
T Consensus 236 ~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~~~ 315 (635)
T 4g8a_A 236 DSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSLVS 315 (635)
T ss_dssp SSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEEES
T ss_pred ccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhcccccccccc
Confidence 1100
Q ss_pred ----CCccccCCCCCCEEEccccccCCCCCcCcc----------------cccCCCCCcEEEccCccccc--cCChhhhh
Q 041479 212 ----IPHSISNASKLEWLDFANNSLTGLIPEDLD----------------SLVNCTYLEVVSLSVNSLSG--TLPNSLAN 269 (771)
Q Consensus 212 ----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~----------------~l~~l~~L~~L~Ls~N~l~~--~~p~~~~~ 269 (771)
....+....+|+.|++++|.+.+..+..+. ....+++|+.|++++|.+.. ..+..+..
T Consensus 316 ~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~ 395 (635)
T 4g8a_A 316 VTIERVKDFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCSQSDFG 395 (635)
T ss_dssp CEEEECGGGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCCBCTTCCEEECCSSCCBEEEECCHHHHS
T ss_pred cccccccccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCcccccccccccchhhccccccccccccchhh
Confidence 001123334566666666666544332221 11346778888888887752 34555555
Q ss_pred cccccceeecccCcCcccCcccccccCCcceEecCCccceeccC-ccccCCCCCCEEEccCCcccccCCccccccccccc
Q 041479 270 FSSHLRYLYMSANPISGSIPTEIGNLKNLIIIAIEKFILIRNIP-ISVGYLLKLQVLSLFENNISREIPSSLGNFTFLTE 348 (771)
Q Consensus 270 l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 348 (771)
.. +|++|+++.|.+. ..+..|..+++|+.+++..++.....+ ..+..+.+++.+++++|++++..|..+..+++|+.
T Consensus 396 ~~-~L~~L~~~~~~~~-~~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~~~~~~L~~ 473 (635)
T 4g8a_A 396 TI-SLKYLDLSFNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEV 473 (635)
T ss_dssp CS-CCCEEECCSCSEE-EECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCE
T ss_pred hh-hhhhhhccccccc-cccccccccccccchhhhhccccccccccccccccccccccccccccccccccccccchhhhh
Confidence 54 6888888888777 455677888888888888887766554 45778889999999999998888888889999999
Q ss_pred ccccCccc-eecCCcccccccce-eeecccCcccCCCCcCCCCCCCCCeEECCCCcccccCCcchhhhhcccccccEEEC
Q 041479 349 LNLCGNSI-RGSVPSALGSCHQL-WLDLSHNHLTGPIPLAVGNPKSIPHLDLSKNELSGEIPSSLAWIFGYISIFAKLNL 426 (771)
Q Consensus 349 L~Ls~N~l-~~~~p~~~~~l~~l-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~l~~L~~L~L 426 (771)
|+|++|++ .+..|..|..++.| .|||++|+|++..|..|.++++|++|+|++|+|++..|..+. .+++|+.|||
T Consensus 474 L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~----~l~~L~~L~L 549 (635)
T 4g8a_A 474 LKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYK----CLNSLQVLDY 549 (635)
T ss_dssp EECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGT----TCTTCCEEEC
T ss_pred hhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHh----CCCCCCEEEC
Confidence 99999874 44678888888888 899999999988889999999999999999999977777654 8889999999
Q ss_pred cCCCCCCCCCcccc-c-cccccccccCCCcccC
Q 041479 427 SYNNLDGDVPRKMI-F-KNASAISEAGNEKLCG 457 (771)
Q Consensus 427 s~N~l~~~~p~~~~-~-~~~~~~~~~~n~~lc~ 457 (771)
++|+|++..|..+. + .++..+.+.+||+.|+
T Consensus 550 s~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~ 582 (635)
T 4g8a_A 550 SLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 582 (635)
T ss_dssp TTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCS
T ss_pred CCCcCCCCCHHHHHhhhCcCCEEEeeCCCCccc
Confidence 99999988777653 2 4677788899999885
No 35
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=3.1e-42 Score=359.95 Aligned_cols=229 Identities=23% Similarity=0.224 Sum_probs=177.4
Q ss_pred cccccccccccccceEEEEEec---CCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCce
Q 041479 522 DLLLNVSYESLVKATVYKGILD---LDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNY 596 (771)
Q Consensus 522 ~~~~~~~l~~~~~~~Vy~~~~~---~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~ 596 (771)
++.....+|+|++|+||+|+.. .+++.||||++.... .....++.+|++++++++|||||++++++.+.+
T Consensus 25 ~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~----- 99 (304)
T 3ubd_A 25 QFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEG----- 99 (304)
T ss_dssp GEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETT-----
T ss_pred ccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECC-----
Confidence 3455567999999999999874 356799999996542 223457889999999999999999999998877
Q ss_pred eEEEEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCcccc
Q 041479 597 FRALVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673 (771)
Q Consensus 597 ~~~lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~ 673 (771)
..|+|||||+||+|.++ ...+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+|+..
T Consensus 100 ~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFGla~~~ 176 (304)
T 3ubd_A 100 KLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFGLSKES 176 (304)
T ss_dssp EEEEEECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSEEEEC-
T ss_pred EEEEEEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecccccceec
Confidence 78999999999999876 35689999999999999999999996 9999999999999999999999999999865
Q ss_pred CcccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhc
Q 041479 674 PEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVL 738 (771)
Q Consensus 674 ~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 738 (771)
..... ...+.+||+.||||| +||++|||+||+.||.+.... ..+..+.... ...++.+
T Consensus 177 ~~~~~----~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~-~~~~~i~~~~--~~~p~~~ 249 (304)
T 3ubd_A 177 IDHEK----KAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRK-ETMTMILKAK--LGMPQFL 249 (304)
T ss_dssp ----C----CCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHCC--CCCCTTS
T ss_pred cCCCc----cccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHH-HHHHHHHcCC--CCCCCcC
Confidence 43221 223468999999999 699999999999999753211 1122333322 2344566
Q ss_pred CccccccCcccChhchhhcCCH-----HHHHH
Q 041479 739 DPLFLVGGVQEGEETAEENIKK-----GQIRE 765 (771)
Q Consensus 739 ~~~~~~~~~~cl~~~p~~Rpt~-----~~vl~ 765 (771)
++.+.....+||++||++|||+ +|+++
T Consensus 250 s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~ 281 (304)
T 3ubd_A 250 SPEAQSLLRMLFKRNPANRLGAGPDGVEEIKR 281 (304)
T ss_dssp CHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred CHHHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence 7777777889999999999984 56653
No 36
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=1.9e-41 Score=355.58 Aligned_cols=235 Identities=22% Similarity=0.270 Sum_probs=168.9
Q ss_pred cccccccccccceEEEEEecCCCeEEEEEEeeccc-hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCC-------CCc
Q 041479 524 LLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDF-------QGN 595 (771)
Q Consensus 524 ~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~-------~~~ 595 (771)
.....+|+|++|+||+|+++.+++.||||++.... ....+++.+|+++|++++|||||++++++.+.+. ...
T Consensus 8 ~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~~ 87 (299)
T 4g31_A 8 EPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPK 87 (299)
T ss_dssp EEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----------C
T ss_pred EEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccCCC
Confidence 33456899999999999999999999999997543 3456789999999999999999999999876442 122
Q ss_pred eeEEEEEEeccCCCCCCC------cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccC
Q 041479 596 YFRALVYEFMHHGSLESC------PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGL 669 (771)
Q Consensus 596 ~~~~lv~e~~~~g~L~~~------~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl 669 (771)
.+.|+|||||++|+|.++ ....++..+..|+.|+++||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 88 ~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl~DFGl 164 (299)
T 4g31_A 88 VYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGL 164 (299)
T ss_dssp EEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCCC
T ss_pred cEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEEccCcc
Confidence 357999999999999776 12345666889999999999999996 999999999999999999999999999
Q ss_pred ccccCcccCCc--------ccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHH
Q 041479 670 TRFIPEVMSSN--------QCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFV 726 (771)
Q Consensus 670 a~~~~~~~~~~--------~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~ 726 (771)
|+......... .....+.+||+.||||| +||++|||++ ||.........+....
T Consensus 165 a~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyell~---Pf~~~~~~~~~~~~~~ 241 (299)
T 4g31_A 165 VTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLY---PFSTQMERVRTLTDVR 241 (299)
T ss_dssp C--------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHHHHH
T ss_pred ceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHHHcc---CCCCccHHHHHHHHHh
Confidence 98765432211 11234568999999999 7999999996 7754221111122222
Q ss_pred HhhCCCchhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 727 KMALPDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 727 ~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
....|+ ......+.......+||++||++|||+.|+++
T Consensus 242 ~~~~p~-~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 279 (299)
T 4g31_A 242 NLKFPP-LFTQKYPCEYVMVQDMLSPSPMERPEAINIIE 279 (299)
T ss_dssp TTCCCH-HHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred cCCCCC-CCcccCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 333332 22223344445566999999999999999986
No 37
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=1.1e-40 Score=381.00 Aligned_cols=372 Identities=19% Similarity=0.230 Sum_probs=303.1
Q ss_pred CCCCcEEEEEcCCCCCcccCCccccCCCCCcEEEcCCCcccccCCccccCCCCCCEEecccCcCcccCCcccccCCcccc
Q 041479 41 LKYQRVILLNLSGQNLTGTASPYIGNLTFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNALQGQIPDSRLILNKLEG 120 (771)
Q Consensus 41 ~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~l~~n~l~~ 120 (771)
....+++.|+|++|++++..|..|+.+++|++|+|++|+|++ +|.. .+++|++|+|++|++++ .
T Consensus 42 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-lp~~--~l~~L~~L~L~~N~l~~-------------~ 105 (520)
T 2z7x_B 42 LSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHNKLVK-ISCH--PTVNLKHLDLSFNAFDA-------------L 105 (520)
T ss_dssp TTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSSCCCE-EECC--CCCCCSEEECCSSCCSS-------------C
T ss_pred cccccccEEecCCCccCCcChHHhhcccCCCEEecCCCceee-cCcc--ccCCccEEeccCCcccc-------------c
Confidence 345789999999999999889999999999999999999995 6666 89999999999999752 1
Q ss_pred cCCccccCCCCCCEEecccccCcC----CCCcc--ceeeeccccc--ccccCccccC-----------------------
Q 041479 121 NIPSELGSLLKFKGLGLANNYFTG----PIPHL--NMFQVSVYSL--TGSIPIQLLN----------------------- 169 (771)
Q Consensus 121 ~~p~~~~~l~~L~~L~Ls~N~l~~----~lp~L--~~l~l~~n~l--~~~~p~~~~~----------------------- 169 (771)
.+|..|+++++|++|++++|+|++ .++.| +.++++.|.+ .+..|..+..
T Consensus 106 ~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~L~L~~L~l~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~ 185 (520)
T 2z7x_B 106 PICKEFGNMSQLKFLGLSTTHLEKSSVLPIAHLNISKVLLVLGETYGEKEDPEGLQDFNTESLHIVFPTNKEFHFILDVS 185 (520)
T ss_dssp CCCGGGGGCTTCCEEEEEESSCCGGGGGGGTTSCEEEEEEEECTTTTSSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCC
T ss_pred cchhhhccCCcceEEEecCcccchhhccccccceeeEEEeecccccccccccccccccccceEEEEeccCcchhhhhhhh
Confidence 367899999999999999999974 45567 9999999999 6666665554
Q ss_pred ---CCCCCEEecccCc------------------------------CcccCChhhh--hCCCCCcEEEeecCcccccCCc
Q 041479 170 ---ITSMEYFHVSENQ------------------------------LVGELPPHIG--FTLPNVRILLLAGNQFFGNIPH 214 (771)
Q Consensus 170 ---l~~L~~L~Ls~N~------------------------------l~g~lp~~~~--~~l~~L~~L~L~~N~l~~~~p~ 214 (771)
+++|+.|++++|. +++..+..+. ...++|++|++++|++++.+|.
T Consensus 186 ~~~l~~L~~L~l~~n~~~~~~~~~~~~~~~l~~l~~L~~L~l~~~~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~ 265 (520)
T 2z7x_B 186 VKTVANLELSNIKCVLEDNKCSYFLSILAKLQTNPKLSNLTLNNIETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDF 265 (520)
T ss_dssp CTTCSEEEECCEEECCSTTTTHHHHHHHHGGGGCTTCCEEEEEEEEEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCC
T ss_pred hhcccceeeccccccccccccceeecchhhhccccchhhccccccccCHHHHHHHHHHhhhCcccEEEeecccccCcccc
Confidence 4455555555554 3321111111 0135899999999999989999
Q ss_pred cc-----cCCCCCCEEEccccccCCCCCcCcccccCCCCCcEEEccCccccccCChhhhhcccccceeecccCcCcccCc
Q 041479 215 SI-----SNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSLSGTLPNSLANFSSHLRYLYMSANPISGSIP 289 (771)
Q Consensus 215 ~~-----~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p 289 (771)
.+ ..+++|+.+++++|.+ ..++..+..+..-.+|+.|++++|.+.+ ++. ...+ ++|++|++++|++++.+|
T Consensus 266 ~~~~~~~~~l~~L~~l~l~~n~~-~~p~~~~~~~~~~~~L~~L~l~~n~l~~-~~~-~~~l-~~L~~L~Ls~n~l~~~~~ 341 (520)
T 2z7x_B 266 RDFDYSGTSLKALSIHQVVSDVF-GFPQSYIYEIFSNMNIKNFTVSGTRMVH-MLC-PSKI-SPFLHLDFSNNLLTDTVF 341 (520)
T ss_dssp CCCCCCSCCCCEEEEEEEEECCC-CSCTHHHHHHHHTCCCSEEEEESSCCCC-CCC-CSSC-CCCCEEECCSSCCCTTTT
T ss_pred chhhcccccCceeEeccccccce-ecchhhhhcccccCceeEEEcCCCcccc-ccc-hhhC-CcccEEEeECCccChhhh
Confidence 88 9999999999999999 3332444322223679999999999873 331 1344 479999999999999899
Q ss_pred ccccccCCcceEecCCcccee--ccCccccCCCCCCEEEccCCcccccCCc-ccccccccccccccCccceecCCccccc
Q 041479 290 TEIGNLKNLIIIAIEKFILIR--NIPISVGYLLKLQVLSLFENNISREIPS-SLGNFTFLTELNLCGNSIRGSVPSALGS 366 (771)
Q Consensus 290 ~~~~~l~~L~~L~l~~n~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 366 (771)
..|+.+++|+.|++++|.+.+ .+|..+..+++|++|++++|++++.+|. .+..+++|++|++++|++++..|..+.
T Consensus 342 ~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~- 420 (520)
T 2z7x_B 342 ENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP- 420 (520)
T ss_dssp TTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC-
T ss_pred hhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc-
Confidence 999999999999999999986 6678899999999999999999974555 588999999999999999988877664
Q ss_pred ccce-eeecccCcccCCCCcCCCCCCCCCeEECCCCcccccCCcchhhhhcccccccEEECcCCCCCCCCCccc
Q 041479 367 CHQL-WLDLSHNHLTGPIPLAVGNPKSIPHLDLSKNELSGEIPSSLAWIFGYISIFAKLNLSYNNLDGDVPRKM 439 (771)
Q Consensus 367 l~~l-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 439 (771)
+.| .|++++|+++ .+|..+..+++|++|+|++|+|+ .+|.. .|..+++|+.|++++|+++|.++..+
T Consensus 421 -~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~---~~~~l~~L~~L~l~~N~~~c~c~~~~ 488 (520)
T 2z7x_B 421 -PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLK-SVPDG---IFDRLTSLQKIWLHTNPWDCSCPRID 488 (520)
T ss_dssp -TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCCTT---TTTTCTTCCEEECCSSCBCCCHHHHH
T ss_pred -ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCC-ccCHH---HhccCCcccEEECcCCCCcccCCchH
Confidence 567 8999999999 67777779999999999999999 56654 24488999999999999999887543
No 38
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=6.6e-40 Score=367.95 Aligned_cols=371 Identities=18% Similarity=0.140 Sum_probs=313.3
Q ss_pred EEEcCCCCCcccCCccccCCCCCcEEEcCCCcccccCCccccCCCCCCEEecccCcCcccCCcccccCCcccccCCcccc
Q 041479 48 LLNLSGQNLTGTASPYIGNLTFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNALQGQIPDSRLILNKLEGNIPSELG 127 (771)
Q Consensus 48 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~l~~n~l~~~~p~~~~ 127 (771)
.++.++++++. +|. + .++|++|+|++|+|++..|..|+++++|++|+|++|.+.+. ..|..|.
T Consensus 14 ~~~c~~~~l~~-lp~-l--~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~-------------i~~~~~~ 76 (455)
T 3v47_A 14 NAICINRGLHQ-VPE-L--PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLV-------------IRNNTFR 76 (455)
T ss_dssp EEECCSSCCSS-CCC-C--CTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCE-------------ECTTTTT
T ss_pred ccCcCCCCccc-CCC-C--CCccCEEEecCCccCcCChhHhccCccccEEECcCCcccce-------------ECccccc
Confidence 58889999984 444 3 38899999999999998899999999999999999996521 2356788
Q ss_pred CCCCCCEEecccccCcCCCCccceeeecccccccccCccccCCCCCCEEecccCcCcccCChh-hhhCCCCCcEEEeecC
Q 041479 128 SLLKFKGLGLANNYFTGPIPHLNMFQVSVYSLTGSIPIQLLNITSMEYFHVSENQLVGELPPH-IGFTLPNVRILLLAGN 206 (771)
Q Consensus 128 ~l~~L~~L~Ls~N~l~~~lp~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~-~~~~l~~L~~L~L~~N 206 (771)
++++|++|+|++|++++ ..|..|.++++|++|++++|++++.+|.. .+..+++|++|+|++|
T Consensus 77 ~l~~L~~L~Ls~n~l~~-----------------~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n 139 (455)
T 3v47_A 77 GLSSLIILKLDYNQFLQ-----------------LETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDN 139 (455)
T ss_dssp TCTTCCEEECTTCTTCE-----------------ECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSS
T ss_pred ccccCCEEeCCCCccCc-----------------cChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCC
Confidence 99999999999998873 55778999999999999999998655543 2448999999999999
Q ss_pred cccccCCcc-ccCCCCCCEEEccccccCCCCCcCcccccCCCCCcEEEccCccccccCChhh--------hhccccccee
Q 041479 207 QFFGNIPHS-ISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSLSGTLPNSL--------ANFSSHLRYL 277 (771)
Q Consensus 207 ~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~--------~~l~~~L~~L 277 (771)
+|++..|.. |.++++|++|++++|++++..|..+..+.. .+|+.|++++|.+.+..+..+ ..+. +|++|
T Consensus 140 ~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~-~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~-~L~~L 217 (455)
T 3v47_A 140 NIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQG-KHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNT-SITTL 217 (455)
T ss_dssp BCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTT-CEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTC-EEEEE
T ss_pred ccCccCcccccCCCCcccEEeCCCCcccccChhhhhcccc-ccccccccccCcccccchhhccccccccccccc-eeeeE
Confidence 999888876 899999999999999999998887744422 689999999999985443322 2333 79999
Q ss_pred ecccCcCcccCccccccc---CCcceEecCCccceec----------cCccccC--CCCCCEEEccCCcccccCCccccc
Q 041479 278 YMSANPISGSIPTEIGNL---KNLIIIAIEKFILIRN----------IPISVGY--LLKLQVLSLFENNISREIPSSLGN 342 (771)
Q Consensus 278 ~Ls~N~l~~~~p~~~~~l---~~L~~L~l~~n~l~~~----------~p~~~~~--l~~L~~L~Ls~N~l~~~~p~~~~~ 342 (771)
++++|++++..|..|..+ ++|+.|++++|...+. .+..+.. .++|+.|++++|++++..|..|..
T Consensus 218 ~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~ 297 (455)
T 3v47_A 218 DLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFGHTNFKDPDNFTFKGLEASGVKTCDLSKSKIFALLKSVFSH 297 (455)
T ss_dssp ECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTTCCSSCCCCTTTTGGGTTSCCCEEECCSSCCCEECTTTTTT
T ss_pred ecCCCcccccchhhhhccccccceeeEeeccccccccccchhhhccCcccccccccccCceEEEecCccccccchhhccc
Confidence 999999999888887765 8999999998865432 1122222 368999999999999999999999
Q ss_pred ccccccccccCccceecCCcccccccce-eeecccCcccCCCCcCCCCCCCCCeEECCCCcccccCCcchhhhhcccccc
Q 041479 343 FTFLTELNLCGNSIRGSVPSALGSCHQL-WLDLSHNHLTGPIPLAVGNPKSIPHLDLSKNELSGEIPSSLAWIFGYISIF 421 (771)
Q Consensus 343 l~~L~~L~Ls~N~l~~~~p~~~~~l~~l-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~l~~L 421 (771)
+++|++|+|++|++++..|..+..++.| .|+|++|++++..|..|..+++|++|+|++|++++..|..+. .+++|
T Consensus 298 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~----~l~~L 373 (455)
T 3v47_A 298 FTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFL----GLPNL 373 (455)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTTTTT----TCTTC
T ss_pred CCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChhhcc----ccccc
Confidence 9999999999999999999999999999 999999999988899999999999999999999988888765 89999
Q ss_pred cEEECcCCCCCCCCCccc-cccccccccccCCCcccCC
Q 041479 422 AKLNLSYNNLDGDVPRKM-IFKNASAISEAGNEKLCGG 458 (771)
Q Consensus 422 ~~L~Ls~N~l~~~~p~~~-~~~~~~~~~~~~n~~lc~~ 458 (771)
+.|+|++|++++..+..+ ...++..+.+.+|+..|..
T Consensus 374 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 411 (455)
T 3v47_A 374 KELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 411 (455)
T ss_dssp CEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCT
T ss_pred cEEECCCCccccCCHhHhccCCcccEEEccCCCcccCC
Confidence 999999999997555432 3567888899999988854
No 39
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=2.6e-40 Score=380.40 Aligned_cols=378 Identities=18% Similarity=0.190 Sum_probs=296.9
Q ss_pred CCCcEEEEEcCCCCCcccCCccccCCCCCcEEEcCCCcccccCCccccCCCCCCEEecccCcCcc-cCCcc---------
Q 041479 42 KYQRVILLNLSGQNLTGTASPYIGNLTFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNALQG-QIPDS--------- 111 (771)
Q Consensus 42 ~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~--------- 111 (771)
...+++.|+|++|++++..|.+|+.+++|++|+|++|++++..|..|+++++|++|+|++|.+++ .+|..
T Consensus 48 ~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~ 127 (549)
T 2z81_A 48 ACANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQT 127 (549)
T ss_dssp SCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCE
T ss_pred cCCcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccE
Confidence 34789999999999999989999999999999999999998777779999999999999999986 23432
Q ss_pred -cccCCcccccC-CccccCCCCCCEEecccccCcCC-------CCccceeeecccccccccCccccCCCCCCEEecccCc
Q 041479 112 -RLILNKLEGNI-PSELGSLLKFKGLGLANNYFTGP-------IPHLNMFQVSVYSLTGSIPIQLLNITSMEYFHVSENQ 182 (771)
Q Consensus 112 -~l~~n~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~-------lp~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~ 182 (771)
.+..|.+.+.+ +..|+++++|++|++++|++++. ++.|+.|+++.|.+....+..+..+++|++|++++|+
T Consensus 128 L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~ 207 (549)
T 2z81_A 128 LRIGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTN 207 (549)
T ss_dssp EEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCB
T ss_pred EECCCCccccccCHhhhhcccccCeeeccCCcccccChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCc
Confidence 24556634444 46899999999999999999864 4458999999998864433334679999999999999
Q ss_pred CcccC--ChhhhhCCCCCcEEEeecCccc----------------------------ccC--------------------
Q 041479 183 LVGEL--PPHIGFTLPNVRILLLAGNQFF----------------------------GNI-------------------- 212 (771)
Q Consensus 183 l~g~l--p~~~~~~l~~L~~L~L~~N~l~----------------------------~~~-------------------- 212 (771)
+++.. |..+...+++|+.|++++|+++ +..
T Consensus 208 l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~ 287 (549)
T 2z81_A 208 LARFQFSPLPVDEVSSPMKKLAFRGSVLTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVT 287 (549)
T ss_dssp CTTCCCCCCSSCCCCCCCCEEEEESCEEEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEE
T ss_pred cccccccccchhhhhhcccceeccccccchhHHHHHHHHhhhhccccccccccccccccccccccchhhhhhhccccccc
Confidence 98521 2222223444555555544443 210
Q ss_pred ---------------CccccCCCCCCEEEccccccCCCCCcCcccccCCCCCcEEEccCccccccCChh---hhhccccc
Q 041479 213 ---------------PHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSLSGTLPNS---LANFSSHL 274 (771)
Q Consensus 213 ---------------p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~---~~~l~~~L 274 (771)
+..+....+|+.|++++|+++. +|..+ +.++++|++|++++|++++.+|.. +..++ +|
T Consensus 288 l~~~~i~~~~~~~~l~~~~~~~~~L~~L~l~~n~l~~-ip~~~--~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~-~L 363 (549)
T 2z81_A 288 IRRLHIPQFYLFYDLSTVYSLLEKVKRITVENSKVFL-VPCSF--SQHLKSLEFLDLSENLMVEEYLKNSACKGAWP-SL 363 (549)
T ss_dssp EESCBCSCGGGSCCCCHHHHHSTTCCEEEEESSCCCC-CCHHH--HHHCTTCCEEECCSSCCCHHHHHHHTCTTSST-TC
T ss_pred ccccccchhhhcccchhhhhhcccceEEEeccCcccc-CCHHH--HhcCccccEEEccCCccccccccchhhhhccc-cC
Confidence 0001223567888888888874 44433 146899999999999999877543 45554 89
Q ss_pred ceeecccCcCcccCc--ccccccCCcceEecCCccceeccCccccCCCCCCEEEccCCcccccCCccccccccccccccc
Q 041479 275 RYLYMSANPISGSIP--TEIGNLKNLIIIAIEKFILIRNIPISVGYLLKLQVLSLFENNISREIPSSLGNFTFLTELNLC 352 (771)
Q Consensus 275 ~~L~Ls~N~l~~~~p--~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 352 (771)
++|++++|+|++..+ ..+..+++|+.|++++|.+. .+|..+..+++|++|++++|+++ .+|..+. ++|++|+|+
T Consensus 364 ~~L~Ls~N~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~-~l~~~~~--~~L~~L~Ls 439 (549)
T 2z81_A 364 QTLVLSQNHLRSMQKTGEILLTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIR-VVKTCIP--QTLEVLDVS 439 (549)
T ss_dssp CEEECTTSCCCCHHHHHHHGGGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCS-CCCTTSC--TTCSEEECC
T ss_pred cEEEccCCcccccccchhhhhcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCcc-cccchhc--CCceEEECC
Confidence 999999999996543 56899999999999999997 68889999999999999999998 4554442 689999999
Q ss_pred CccceecCCcccccccce-eeecccCcccCCCCcCCCCCCCCCeEECCCCcccccCCcchhhhhcccccccEEECcCCCC
Q 041479 353 GNSIRGSVPSALGSCHQL-WLDLSHNHLTGPIPLAVGNPKSIPHLDLSKNELSGEIPSSLAWIFGYISIFAKLNLSYNNL 431 (771)
Q Consensus 353 ~N~l~~~~p~~~~~l~~l-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~l~~L~~L~Ls~N~l 431 (771)
+|+|++.+ ..++.| .|+|++|+|+ .+|. ...+++|++|+|++|+|++.+|..+. .+++|+.|++++|++
T Consensus 440 ~N~l~~~~----~~l~~L~~L~Ls~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~----~l~~L~~L~l~~N~~ 509 (549)
T 2z81_A 440 NNNLDSFS----LFLPRLQELYISRNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFD----RLTSLQKIWLHTNPW 509 (549)
T ss_dssp SSCCSCCC----CCCTTCCEEECCSSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGG----GCTTCCEEECCSSCB
T ss_pred CCChhhhc----ccCChhcEEECCCCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHh----cCcccCEEEecCCCc
Confidence 99999643 466778 8999999999 5565 46789999999999999988887665 889999999999999
Q ss_pred CCCCCc
Q 041479 432 DGDVPR 437 (771)
Q Consensus 432 ~~~~p~ 437 (771)
+|.+|.
T Consensus 510 ~~~~~~ 515 (549)
T 2z81_A 510 DCSCPR 515 (549)
T ss_dssp CCCHHH
T ss_pred cCCCcc
Confidence 999984
No 40
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=4e-39 Score=371.33 Aligned_cols=153 Identities=16% Similarity=0.207 Sum_probs=113.7
Q ss_pred EEEEcCCCCCcccCCccccCCCCCcEEEcCCCcccccCCccccCCCCCCEEecccCcCcccCCcccccCCcccccCCccc
Q 041479 47 ILLNLSGQNLTGTASPYIGNLTFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNALQGQIPDSRLILNKLEGNIPSEL 126 (771)
Q Consensus 47 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~l~~n~l~~~~p~~~ 126 (771)
+.+|+++|++++ +|..+. ++|++|+|++|+|++..|.+|+++++|++|+|++|+++ +..|+.|
T Consensus 34 ~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~--------------~~~~~~~ 96 (562)
T 3a79_B 34 SMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIR--------------SLDFHVF 96 (562)
T ss_dssp CEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCC--------------EECTTTT
T ss_pred cEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCC--------------cCCHHHh
Confidence 678888888885 454443 78888888888888777778888888888888888854 4556778
Q ss_pred cCCCCCCEEecccccCcC----CCCccceeeeccccccc-ccCccccCCCCCCEEecccCcCcccCChhhhhCCCCC--c
Q 041479 127 GSLLKFKGLGLANNYFTG----PIPHLNMFQVSVYSLTG-SIPIQLLNITSMEYFHVSENQLVGELPPHIGFTLPNV--R 199 (771)
Q Consensus 127 ~~l~~L~~L~Ls~N~l~~----~lp~L~~l~l~~n~l~~-~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L--~ 199 (771)
.++++|++|+|++|+|+. .++.|+.|++++|.+++ .+|..|.++++|++|++++|++++. .+ ..+++| +
T Consensus 97 ~~l~~L~~L~Ls~N~l~~lp~~~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~-~~l~~L~L~ 172 (562)
T 3a79_B 97 LFNQDLEYLDVSHNRLQNISCCPMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DL-LPVAHLHLS 172 (562)
T ss_dssp TTCTTCCEEECTTSCCCEECSCCCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TT-GGGTTSCEE
T ss_pred CCCCCCCEEECCCCcCCccCccccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---ch-hhhhhceee
Confidence 888888888888888873 34568888888888876 4467888888888888888888742 12 244555 8
Q ss_pred EEEeecCcc--cccCCccccCCC
Q 041479 200 ILLLAGNQF--FGNIPHSISNAS 220 (771)
Q Consensus 200 ~L~L~~N~l--~~~~p~~~~~l~ 220 (771)
.|++++|++ ++..|..|..+.
T Consensus 173 ~L~L~~n~l~~~~~~~~~l~~l~ 195 (562)
T 3a79_B 173 CILLDLVSYHIKGGETESLQIPN 195 (562)
T ss_dssp EEEEEESSCCCCSSSCCEEEECC
T ss_pred EEEeecccccccccCcccccccC
Confidence 888888888 666666665543
No 41
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=1.6e-39 Score=374.64 Aligned_cols=384 Identities=21% Similarity=0.233 Sum_probs=262.3
Q ss_pred CcEEEEEcCCCCCcccCCccccCCCCCcEEEcCCCcccccCCccccCCCCCCEEecccCcCcccCCcc--------cccC
Q 041479 44 QRVILLNLSGQNLTGTASPYIGNLTFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNALQGQIPDS--------RLIL 115 (771)
Q Consensus 44 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~--------~l~~ 115 (771)
++++.|+|++|++++..+..|..+++|++|+|++|+|++..|++|+++++|++|+|++|+++ .+|.. .+..
T Consensus 52 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~l~~L~~L~Ls~ 130 (562)
T 3a79_B 52 PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCCPMASLRHLDLSF 130 (562)
T ss_dssp TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSCCCTTCSEEECCS
T ss_pred CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCccccccCCEEECCC
Confidence 68999999999999888899999999999999999999988999999999999999999998 44432 2566
Q ss_pred Ccccc-cCCccccCCCCCCEEecccccCcC----CCCcc--ceeeeccccc--ccccCccccCCC-CCCEEecccCcCcc
Q 041479 116 NKLEG-NIPSELGSLLKFKGLGLANNYFTG----PIPHL--NMFQVSVYSL--TGSIPIQLLNIT-SMEYFHVSENQLVG 185 (771)
Q Consensus 116 n~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~----~lp~L--~~l~l~~n~l--~~~~p~~~~~l~-~L~~L~Ls~N~l~g 185 (771)
|++++ .+|..|+++++|++|++++|++++ .++.| +.++++.|.+ ++..|..+..+. +.-.++++.|.+.+
T Consensus 131 N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~~~~~l~~L~L~~L~L~~n~l~~~~~~~~~l~~l~~~~l~l~l~~n~~~~ 210 (562)
T 3a79_B 131 NDFDVLPVCKEFGNLTKLTFLGLSAAKFRQLDLLPVAHLHLSCILLDLVSYHIKGGETESLQIPNTTVLHLVFHPNSLFS 210 (562)
T ss_dssp SCCSBCCCCGGGGGCTTCCEEEEECSBCCTTTTGGGTTSCEEEEEEEESSCCCCSSSCCEEEECCEEEEEEEECSSSCCC
T ss_pred CCccccCchHhhcccCcccEEecCCCccccCchhhhhhceeeEEEeecccccccccCcccccccCcceEEEEecCccchh
Confidence 77776 356888889999999999998874 33445 8888888888 777777666543 11122334444433
Q ss_pred cCChhhhhCCCCCcEEEeecC----------------------------ccccc----CCccccCCCCCCEEEccccccC
Q 041479 186 ELPPHIGFTLPNVRILLLAGN----------------------------QFFGN----IPHSISNASKLEWLDFANNSLT 233 (771)
Q Consensus 186 ~lp~~~~~~l~~L~~L~L~~N----------------------------~l~~~----~p~~~~~l~~L~~L~Ls~N~l~ 233 (771)
.++...+..+++|+.|++++| .+++. .+.. ...++|++|++++|.++
T Consensus 211 ~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~~~l~~l~~L~~L~L~~~~l~~~~~~~~~~~-~~~~~L~~L~l~~n~l~ 289 (562)
T 3a79_B 211 VQVNMSVNALGHLQLSNIKLNDENCQRLMTFLSELTRGPTLLNVTLQHIETTWKCSVKLFQF-FWPRPVEYLNIYNLTIT 289 (562)
T ss_dssp CCCEEEESSEEEEEEEEEECCSTTHHHHHHHHHHHHSCSSCEEEEEEEEEECHHHHHHHHHH-HTTSSEEEEEEEEEEEC
T ss_pred hhhhhcccccceEEEecccccccccchHHHHHHHHhccCcceEEEecCCcCcHHHHHHHHHh-hhcccccEEEEeccEee
Confidence 333322223333333333333 22110 0001 11235566666666665
Q ss_pred CCCCcCcccc--cCC--------------------------CCCcEEEccCccccccCChhhhhcccccceeecccCcCc
Q 041479 234 GLIPEDLDSL--VNC--------------------------TYLEVVSLSVNSLSGTLPNSLANFSSHLRYLYMSANPIS 285 (771)
Q Consensus 234 ~~~p~~~~~l--~~l--------------------------~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~ 285 (771)
+.+|..+... .++ .+|+.|++++|.+.. .+. ...+ ++|++|++++|+++
T Consensus 290 ~~ip~~~~~~~~~~L~~L~~~~~~~~~~~~p~~~~~~~~~~~~L~~L~l~~n~~~~-~~~-~~~l-~~L~~L~l~~n~l~ 366 (562)
T 3a79_B 290 ERIDREEFTYSETALKSLMIEHVKNQVFLFSKEALYSVFAEMNIKMLSISDTPFIH-MVC-PPSP-SSFTFLNFTQNVFT 366 (562)
T ss_dssp SCCCCCCCCCCSCSCCEEEEEEEEECCCSSCHHHHHHHHHTCCCSEEEEESSCCCC-CCC-CSSC-CCCCEEECCSSCCC
T ss_pred ccccchhhhcccccchheehhhcccceeecChhhhhhhhccCcceEEEccCCCccc-ccC-ccCC-CCceEEECCCCccc
Confidence 5555433100 122 346666777776652 210 1233 36888888888888
Q ss_pred ccCcccccccCCcceEecCCcccee--ccCccccCCCCCCEEEccCCcccccCCc-ccccccccccccccCccceecCCc
Q 041479 286 GSIPTEIGNLKNLIIIAIEKFILIR--NIPISVGYLLKLQVLSLFENNISREIPS-SLGNFTFLTELNLCGNSIRGSVPS 362 (771)
Q Consensus 286 ~~~p~~~~~l~~L~~L~l~~n~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~ 362 (771)
+.+|..|.++++|+.|++++|.+.+ .+|..+..+++|++|++++|++++.+|. .+..+++|++|++++|++++..|.
T Consensus 367 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 446 (562)
T 3a79_B 367 DSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFR 446 (562)
T ss_dssp TTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGS
T ss_pred cchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhh
Confidence 7778888888888888888888765 3456677888888888888888763443 577788888888888888776666
Q ss_pred ccccccce-eeecccCcccCCCCcCCCCCCCCCeEECCCCcccccCCcchhhhhcccccccEEECcCCCCCCCCCccc
Q 041479 363 ALGSCHQL-WLDLSHNHLTGPIPLAVGNPKSIPHLDLSKNELSGEIPSSLAWIFGYISIFAKLNLSYNNLDGDVPRKM 439 (771)
Q Consensus 363 ~~~~l~~l-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 439 (771)
.+. +.| .|+|++|+++ .+|..+..+++|++|+|++|+|+ .+|.. .|..+++|+.|+|++|+++|.+|..+
T Consensus 447 ~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~---~~~~l~~L~~L~l~~N~~~c~c~~~~ 517 (562)
T 3a79_B 447 CLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLK-SVPDG---VFDRLTSLQYIWLHDNPWDCTCPGIR 517 (562)
T ss_dssp SCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCC-CCCTT---STTTCTTCCCEECCSCCBCCCHHHHH
T ss_pred hhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCC-CCCHH---HHhcCCCCCEEEecCCCcCCCcchHH
Confidence 554 455 7888888887 45555558888888888888888 45544 13377888888888888888777543
No 42
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.2e-39 Score=364.58 Aligned_cols=342 Identities=21% Similarity=0.210 Sum_probs=205.4
Q ss_pred EEcCCCCCcccCCccccCCCCCcEEEcCCCcccccCCccccCCCCCCEEecccCcCcccCCcccccCCcccccCCccccC
Q 041479 49 LNLSGQNLTGTASPYIGNLTFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNALQGQIPDSRLILNKLEGNIPSELGS 128 (771)
Q Consensus 49 L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~l~~n~l~~~~p~~~~~ 128 (771)
++.++++++ .+|..+ .++|+.|+|++|+|++..|..|.++++|++|+|++|.++ +..|..|.+
T Consensus 16 v~c~~~~l~-~ip~~~--~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~--------------~~~~~~~~~ 78 (477)
T 2id5_A 16 VLCHRKRFV-AVPEGI--PTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVS--------------AVEPGAFNN 78 (477)
T ss_dssp EECCSCCCS-SCCSCC--CTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCC--------------EECTTTTTT
T ss_pred EEeCCCCcC-cCCCCC--CCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccC--------------EeChhhhhC
Confidence 444556676 445544 368999999999999888889999999999999999865 455667777
Q ss_pred CCCCCEEecccccCcCCCCccceeeecccccccccCccccCCCCCCEEecccCcCcccCChhhhhCCCCCcEEEeecCcc
Q 041479 129 LLKFKGLGLANNYFTGPIPHLNMFQVSVYSLTGSIPIQLLNITSMEYFHVSENQLVGELPPHIGFTLPNVRILLLAGNQF 208 (771)
Q Consensus 129 l~~L~~L~Ls~N~l~~~lp~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~N~l 208 (771)
+++|++|+|++|++++ ..+..|.++++|++|+|++|++++..|. .+..+++|+.|+|++|++
T Consensus 79 l~~L~~L~L~~n~l~~-----------------~~~~~~~~l~~L~~L~Ls~n~i~~~~~~-~~~~l~~L~~L~l~~n~l 140 (477)
T 2id5_A 79 LFNLRTLGLRSNRLKL-----------------IPLGVFTGLSNLTKLDISENKIVILLDY-MFQDLYNLKSLEVGDNDL 140 (477)
T ss_dssp CTTCCEEECCSSCCCS-----------------CCTTSSTTCTTCCEEECTTSCCCEECTT-TTTTCTTCCEEEECCTTC
T ss_pred CccCCEEECCCCcCCc-----------------cCcccccCCCCCCEEECCCCccccCChh-HccccccCCEEECCCCcc
Confidence 8888888887777762 2223456677777777777777633333 333666777777777777
Q ss_pred cccCCccccCCCCCCEEEccccccCCCCCcCcccccCCCCCcEEEccCccccccCChhhhhcccccceeecccCcCcccC
Q 041479 209 FGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSLSGTLPNSLANFSSHLRYLYMSANPISGSI 288 (771)
Q Consensus 209 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~ 288 (771)
++..|..|.++++|+.|+|++|+++++.+..| .++++|+.|++++|.+++..+..+..+. +|++|++++|.+.+.+
T Consensus 141 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l---~~l~~L~~L~l~~n~i~~~~~~~~~~l~-~L~~L~l~~~~~~~~~ 216 (477)
T 2id5_A 141 VYISHRAFSGLNSLEQLTLEKCNLTSIPTEAL---SHLHGLIVLRLRHLNINAIRDYSFKRLY-RLKVLEISHWPYLDTM 216 (477)
T ss_dssp CEECTTSSTTCTTCCEEEEESCCCSSCCHHHH---TTCTTCCEEEEESCCCCEECTTCSCSCT-TCCEEEEECCTTCCEE
T ss_pred ceeChhhccCCCCCCEEECCCCcCcccChhHh---cccCCCcEEeCCCCcCcEeChhhcccCc-ccceeeCCCCcccccc
Confidence 66666666667777777777776665544433 4555666666666666544444444443 4555555555554444
Q ss_pred cccccccCCcceEecCCccceeccCccccCCCCCCEEEccCCcccccCCcccccccccccccccCccceecCCccccccc
Q 041479 289 PTEIGNLKNLIIIAIEKFILIRNIPISVGYLLKLQVLSLFENNISREIPSSLGNFTFLTELNLCGNSIRGSVPSALGSCH 368 (771)
Q Consensus 289 p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 368 (771)
|..+ ....+|+.|+|++|+++...+..|..+++|+.|+|++|++++..+..|..+.
T Consensus 217 ~~~~------------------------~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~ 272 (477)
T 2id5_A 217 TPNC------------------------LYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELL 272 (477)
T ss_dssp CTTT------------------------TTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCT
T ss_pred Cccc------------------------ccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccc
Confidence 4433 3334555555555555533223455555555555555555555555555555
Q ss_pred ce-eeecccCcccCCCCcCCCCCCCCCeEECCCCcccccCCcchhhhhcccccccEEECcCCCCCCCCCccccccccccc
Q 041479 369 QL-WLDLSHNHLTGPIPLAVGNPKSIPHLDLSKNELSGEIPSSLAWIFGYISIFAKLNLSYNNLDGDVPRKMIFKNASAI 447 (771)
Q Consensus 369 ~l-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~ 447 (771)
.| .|+|++|++++..|..|..+++|+.|+|++|+|++..+..+ ..+++|+.|+|++|++.|.++..+.+......
T Consensus 273 ~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~----~~l~~L~~L~l~~N~l~c~c~~~~~~~~~~~~ 348 (477)
T 2id5_A 273 RLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVF----HSVGNLETLILDSNPLACDCRLLWVFRRRWRL 348 (477)
T ss_dssp TCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGB----SCGGGCCEEECCSSCEECSGGGHHHHTTTTSS
T ss_pred cCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHc----CCCcccCEEEccCCCccCccchHhHHhhhhcc
Confidence 55 55555555555555566666666666666666664333332 25566666666666666655544433333333
Q ss_pred cccCCCcccC
Q 041479 448 SEAGNEKLCG 457 (771)
Q Consensus 448 ~~~~n~~lc~ 457 (771)
.+.++...|.
T Consensus 349 ~~~~~~~~C~ 358 (477)
T 2id5_A 349 NFNRQQPTCA 358 (477)
T ss_dssp CCTTCCCBEE
T ss_pred ccCccCceeC
Confidence 4444545554
No 43
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=1e-39 Score=355.52 Aligned_cols=238 Identities=18% Similarity=0.179 Sum_probs=180.8
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCC-CCCceeEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSD-FQGNYFRA 599 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~-~~~~~~~~ 599 (771)
+.....+|+|.+|+||+|+++.+++.||||++.... ....+.+.+|+++|++++|||||++++++.... +......|
T Consensus 56 Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~~ 135 (398)
T 4b99_A 56 YEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVY 135 (398)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCEE
T ss_pred eEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEEE
Confidence 344557999999999999999999999999996442 344578999999999999999999999986542 22334689
Q ss_pred EEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcc
Q 041479 600 LVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676 (771)
Q Consensus 600 lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~ 676 (771)
||||||+ |+|.++ .+.+++.++..|+.|++.||+|||+. +||||||||+|||++.++.+||+|||+|+.+...
T Consensus 136 ivmE~~~-g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~~ 211 (398)
T 4b99_A 136 VVLDLME-SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTS 211 (398)
T ss_dssp EEEECCS-EEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBCC---
T ss_pred EEEeCCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeecceeeecccC
Confidence 9999996 677655 45799999999999999999999996 9999999999999999999999999999876543
Q ss_pred cCCcccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhC----------
Q 041479 677 MSSNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMAL---------- 730 (771)
Q Consensus 677 ~~~~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~---------- 730 (771)
.........+.+||+.||||| +||++|||++|+.||.+.... ..+..+.....
T Consensus 212 ~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~-~~l~~I~~~~g~p~~~~~~~~ 290 (398)
T 4b99_A 212 PAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYV-HQLQLIMMVLGTPSPAVIQAV 290 (398)
T ss_dssp ----CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHH-HHHHHHHHHHCCCCGGGTC--
T ss_pred ccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHH-HHHHHHHHhcCCCChHHhhhh
Confidence 322233345678999999999 699999999999999653111 11222211111
Q ss_pred ------------CC----c---hhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 731 ------------PD----Q---ILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 731 ------------~~----~---~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
+. . ....+++....+..+||+.||++|||+.|+++
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~ 344 (398)
T 4b99_A 291 GAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAALR 344 (398)
T ss_dssp ---CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred hhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcCHHHHhc
Confidence 10 0 01123444445566999999999999999875
No 44
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=1.8e-38 Score=368.05 Aligned_cols=376 Identities=16% Similarity=0.115 Sum_probs=297.3
Q ss_pred CCCCCCCCCCCCCCcc----ceeeeecCCCCcEEEEEcCCCCCcccCCccccCCCCCcEEEcCCCcccccCCccccCCCC
Q 041479 18 PFGALSTWNDSVNFCQ----WLGVTCSLKYQRVILLNLSGQNLTGTASPYIGNLTFLRLINLQQNNFSSNIPHEIGRLFR 93 (771)
Q Consensus 18 ~~~~~~~w~~~~~~c~----w~~v~c~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 93 (771)
....+++|..+.+||. |.++.|+. + ++....... ....-..+++++.|++++|.+++..+..|.++++
T Consensus 5 ~~~~l~~~~~~~~C~~~~~~~~c~~~~~---~---i~~~~~~~~--~~~~~l~l~~l~~l~l~~~~l~~lp~~~~~~l~~ 76 (597)
T 3oja_B 5 QRYNVKPRQPEYKCIDSNLQYDCVFYDV---H---IDMQTQDVY--FGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQ 76 (597)
T ss_dssp ------CCCSEECCCCC--CCSEEECSC---E---ECSSCCCCE--ESCSSGGGCCCSEEEESSCEESEECTHHHHHCCC
T ss_pred ccccccCCCCCCcCcccCcCceeEecCc---e---ecccccccc--cCcccccCCCceEEEeeCCCCCCcCHHHHccCCC
Confidence 3446789988878874 55554432 1 222222221 1112235788999999999999866777899999
Q ss_pred CCEEecccCcCcccCCcccccCCcccccCCccccCCCCCCEEecccccCcCCCCccceeeecccccccccCccccCCCCC
Q 041479 94 LRHIIFNSNALQGQIPDSRLILNKLEGNIPSELGSLLKFKGLGLANNYFTGPIPHLNMFQVSVYSLTGSIPIQLLNITSM 173 (771)
Q Consensus 94 L~~L~Ls~N~l~~~~p~~~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~L~~l~l~~n~l~~~~p~~~~~l~~L 173 (771)
|++|+|++|.++ +..|..|+.+++|+.|+|++|.|++ ..|..|.++++|
T Consensus 77 L~~L~L~~n~l~--------------~~~~~~~~~l~~L~~L~L~~n~l~~-----------------~~~~~~~~l~~L 125 (597)
T 3oja_B 77 VELLNLNDLQIE--------------EIDTYAFAYAHTIQKLYMGFNAIRY-----------------LPPHVFQNVPLL 125 (597)
T ss_dssp CSEEECTTSCCC--------------EECTTTTTTCTTCCEEECCSSCCCC-----------------CCTTTTTTCTTC
T ss_pred CcEEECCCCCCC--------------CCChHHhcCCCCCCEEECCCCcCCC-----------------CCHHHHcCCCCC
Confidence 999999999965 4566688999999999999998873 445668899999
Q ss_pred CEEecccCcCcccCChhhhhCCCCCcEEEeecCcccccCCccccCCCCCCEEEccccccCCCCCcCcccccCCCCCcEEE
Q 041479 174 EYFHVSENQLVGELPPHIGFTLPNVRILLLAGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEVVS 253 (771)
Q Consensus 174 ~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~ 253 (771)
++|+|++|.++ .+|+.++..+++|++|+|++|.|++..|..|.++++|+.|+|++|.+++..+ ..+++|+.|+
T Consensus 126 ~~L~L~~n~l~-~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~------~~l~~L~~L~ 198 (597)
T 3oja_B 126 TVLVLERNDLS-SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDL------SLIPSLFHAN 198 (597)
T ss_dssp CEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCCG------GGCTTCSEEE
T ss_pred CEEEeeCCCCC-CCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCCcCh------hhhhhhhhhh
Confidence 99999999999 7888876689999999999999999999999999999999999999987632 5568899999
Q ss_pred ccCccccccCChhhhhcccccceeecccCcCcccCcccccccCCcceEecCCccceeccCccccCCCCCCEEEccCCccc
Q 041479 254 LSVNSLSGTLPNSLANFSSHLRYLYMSANPISGSIPTEIGNLKNLIIIAIEKFILIRNIPISVGYLLKLQVLSLFENNIS 333 (771)
Q Consensus 254 Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 333 (771)
+++|.+++. + . +.+|+.|++++|.++...+. + .++|+.|++++|.+.+ +..+..+++|+.|+|++|.++
T Consensus 199 l~~n~l~~l-~----~-~~~L~~L~ls~n~l~~~~~~-~--~~~L~~L~L~~n~l~~--~~~l~~l~~L~~L~Ls~N~l~ 267 (597)
T 3oja_B 199 VSYNLLSTL-A----I-PIAVEELDASHNSINVVRGP-V--NVELTILKLQHNNLTD--TAWLLNYPGLVEVDLSYNELE 267 (597)
T ss_dssp CCSSCCSEE-E----C-CTTCSEEECCSSCCCEEECS-C--CSCCCEEECCSSCCCC--CGGGGGCTTCSEEECCSSCCC
T ss_pred cccCccccc-c----C-CchhheeeccCCcccccccc-c--CCCCCEEECCCCCCCC--ChhhccCCCCCEEECCCCccC
Confidence 999999842 2 1 23799999999999854433 3 2689999999999976 477889999999999999999
Q ss_pred ccCCcccccccccccccccCccceecCCcccccccce-eeecccCcccCCCCcCCCCCCCCCeEECCCCcccccCCcchh
Q 041479 334 REIPSSLGNFTFLTELNLCGNSIRGSVPSALGSCHQL-WLDLSHNHLTGPIPLAVGNPKSIPHLDLSKNELSGEIPSSLA 412 (771)
Q Consensus 334 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~ 412 (771)
+..|..|..+++|+.|+|++|++++ +|..+..++.| .|+|++|+++ .+|..+..+++|+.|+|++|+|++..+
T Consensus 268 ~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~~~~~---- 341 (597)
T 3oja_B 268 KIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTLKL---- 341 (597)
T ss_dssp EEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCCCC----
T ss_pred CCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCCCcCh----
Confidence 9999999999999999999999996 46666778888 8999999999 567778889999999999999985432
Q ss_pred hhhcccccccEEECcCCCCCCCCCccccccccccccccCCCcccCCCC
Q 041479 413 WIFGYISIFAKLNLSYNNLDGDVPRKMIFKNASAISEAGNEKLCGGIS 460 (771)
Q Consensus 413 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~ 460 (771)
..+++|+.|+|++|+++|..+..+ +.......+.++...|+...
T Consensus 342 ---~~~~~L~~L~l~~N~~~~~~~~~~-~~~~~~~~~~~~~~~C~~~~ 385 (597)
T 3oja_B 342 ---STHHTLKNLTLSHNDWDCNSLRAL-FRNVARPAVDDADQHCKIDY 385 (597)
T ss_dssp ---CTTCCCSEEECCSSCEEHHHHHHH-TTTCCTTTBCCCCCCCCTTC
T ss_pred ---hhcCCCCEEEeeCCCCCChhHHHH-HHHHhhhccccccccCCcch
Confidence 267899999999999998765433 44555566778888887644
No 45
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=2.5e-38 Score=347.70 Aligned_cols=373 Identities=17% Similarity=0.149 Sum_probs=288.2
Q ss_pred CCCCCCCCCCcc-ceeeeecCCCCcEEEEEcCCCCCcccCCccccCCCCCcEEEcCCCcccccCCccccCCCCCCEEecc
Q 041479 22 LSTWNDSVNFCQ-WLGVTCSLKYQRVILLNLSGQNLTGTASPYIGNLTFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFN 100 (771)
Q Consensus 22 ~~~w~~~~~~c~-w~~v~c~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 100 (771)
+++|....+||. |.+..|.....++ +-..... .....-..+++|++|++++|.++...+..|..+++|++|+|+
T Consensus 3 ~~~~~~~~~C~~~~~~~~c~~~~~~i---~~~~~~~--~~~~~~~~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~ 77 (390)
T 3o6n_A 3 VKPRQPEYKCIDSNLQYDCVFYDVHI---DMQTQDV--YFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNLN 77 (390)
T ss_dssp ----CCEECBCC------EEEESCEE---CSSCCCC--EESCSSGGGCCCSEEEEESCEESEECTHHHHHCCCCSEEECT
T ss_pred cCCCCCccceehhhhhhccceeeeee---ecccccc--cccccccccCCceEEEecCCchhhCChhHhcccccCcEEECC
Confidence 678988888874 5555554321111 1111111 122223467899999999999997656668999999999999
Q ss_pred cCcCcccCCcccccCCcccccCCccccCCCCCCEEecccccCcCCCCccceeeecccccccccCccccCCCCCCEEeccc
Q 041479 101 SNALQGQIPDSRLILNKLEGNIPSELGSLLKFKGLGLANNYFTGPIPHLNMFQVSVYSLTGSIPIQLLNITSMEYFHVSE 180 (771)
Q Consensus 101 ~N~l~~~~p~~~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~ 180 (771)
+|.++ +..+..|..+++|++|+|++|++++ ..|..|.++++|++|++++
T Consensus 78 ~n~i~--------------~~~~~~~~~l~~L~~L~L~~n~l~~-----------------~~~~~~~~l~~L~~L~L~~ 126 (390)
T 3o6n_A 78 DLQIE--------------EIDTYAFAYAHTIQKLYMGFNAIRY-----------------LPPHVFQNVPLLTVLVLER 126 (390)
T ss_dssp TSCCC--------------EECTTTTTTCTTCCEEECCSSCCCC-----------------CCTTTTTTCTTCCEEECCS
T ss_pred CCccc--------------ccChhhccCCCCcCEEECCCCCCCc-----------------CCHHHhcCCCCCCEEECCC
Confidence 99965 3555688999999999999998873 4456688999999999999
Q ss_pred CcCcccCChhhhhCCCCCcEEEeecCcccccCCccccCCCCCCEEEccccccCCCCCcCcccccCCCCCcEEEccCcccc
Q 041479 181 NQLVGELPPHIGFTLPNVRILLLAGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSLS 260 (771)
Q Consensus 181 N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~ 260 (771)
|+++ .+|..++..+++|++|++++|++++..|..|..+++|++|++++|++++.. +..+++|+.|++++|.++
T Consensus 127 n~l~-~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~------~~~l~~L~~L~l~~n~l~ 199 (390)
T 3o6n_A 127 NDLS-SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD------LSLIPSLFHANVSYNLLS 199 (390)
T ss_dssp SCCC-CCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCC------GGGCTTCSEEECCSSCCS
T ss_pred CccC-cCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccc------cccccccceeeccccccc
Confidence 9998 899887668999999999999999888889999999999999999998753 256688999999999998
Q ss_pred ccCChhhhhcccccceeecccCcCcccCcccccccCCcceEecCCccceeccCccccCCCCCCEEEccCCcccccCCccc
Q 041479 261 GTLPNSLANFSSHLRYLYMSANPISGSIPTEIGNLKNLIIIAIEKFILIRNIPISVGYLLKLQVLSLFENNISREIPSSL 340 (771)
Q Consensus 261 ~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 340 (771)
+ ++. ..+|++|++++|.++.. |..+ .++|+.|++++|.+.+. ..+..+++|++|++++|++++..|..|
T Consensus 200 ~-~~~-----~~~L~~L~l~~n~l~~~-~~~~--~~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~ 268 (390)
T 3o6n_A 200 T-LAI-----PIAVEELDASHNSINVV-RGPV--NVELTILKLQHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPF 268 (390)
T ss_dssp E-EEC-----CSSCSEEECCSSCCCEE-ECCC--CSSCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGG
T ss_pred c-cCC-----CCcceEEECCCCeeeec-cccc--cccccEEECCCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHc
Confidence 4 221 23799999999999854 4432 47899999999999764 578899999999999999998889999
Q ss_pred ccccccccccccCccceecCCcccccccce-eeecccCcccCCCCcCCCCCCCCCeEECCCCcccccCCcchhhhhcccc
Q 041479 341 GNFTFLTELNLCGNSIRGSVPSALGSCHQL-WLDLSHNHLTGPIPLAVGNPKSIPHLDLSKNELSGEIPSSLAWIFGYIS 419 (771)
Q Consensus 341 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~l~ 419 (771)
..+++|++|+|++|++++ +|..+..++.| .|++++|+++ .+|..+..+++|++|+|++|+|+.. | +..++
T Consensus 269 ~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~l~~L~~L~L~~N~i~~~-~------~~~~~ 339 (390)
T 3o6n_A 269 VKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIVTL-K------LSTHH 339 (390)
T ss_dssp TTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCCCC-C------CCTTC
T ss_pred cccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccccCcCCEEECCCCcccee-C------chhhc
Confidence 999999999999999986 45566778888 8999999998 4566678889999999999999844 3 22678
Q ss_pred cccEEECcCCCCCCCCCccccccccccccccCCCcccCC
Q 041479 420 IFAKLNLSYNNLDGDVPRKMIFKNASAISEAGNEKLCGG 458 (771)
Q Consensus 420 ~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~ 458 (771)
+|+.|++++|++++..... .+..+....+.+++..|..
T Consensus 340 ~L~~L~l~~N~~~~~~~~~-~~~~~~~~~~~~~~~~c~~ 377 (390)
T 3o6n_A 340 TLKNLTLSHNDWDCNSLRA-LFRNVARPAVDDADQHCKI 377 (390)
T ss_dssp CCSEEECCSSCEEHHHHHH-HTTTCCTTTBCCCCSCCCT
T ss_pred cCCEEEcCCCCccchhHHH-HHHHHHhhcccccCceecc
Confidence 9999999999998765433 2344444555666666654
No 46
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=2e-38 Score=359.44 Aligned_cols=230 Identities=19% Similarity=0.202 Sum_probs=185.5
Q ss_pred ccccccccccccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHH---HHHHHHHhccCCCCceeEEEEeecCCC
Q 041479 519 SRKDLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSF---MAECQALRNIRHRNLVKIITACSTSDF 592 (771)
Q Consensus 519 ~~~~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~---~~E~~~l~~l~H~nIv~l~~~~~~~~~ 592 (771)
...++...-.+|+|++|+||+|+++.+++.||||++.... ......+ ..++.+++.++|||||++++++.+.+
T Consensus 187 slddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~- 265 (689)
T 3v5w_A 187 TMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPD- 265 (689)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSS-
T ss_pred chHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECC-
Confidence 3456666678999999999999999999999999996542 1222333 34467777889999999999998877
Q ss_pred CCceeEEEEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccC
Q 041479 593 QGNYFRALVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGL 669 (771)
Q Consensus 593 ~~~~~~~lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl 669 (771)
..|+|||||+||+|.++ ...+++..+..|+.||+.||+|||+. +||||||||+|||++.+|.+||+|||+
T Consensus 266 ----~lylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFGl 338 (689)
T 3v5w_A 266 ----KLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLGL 338 (689)
T ss_dssp ----EEEEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCTT
T ss_pred ----EEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccce
Confidence 78999999999999876 35689999999999999999999986 999999999999999999999999999
Q ss_pred ccccCcccCCcccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHH--HhhCC
Q 041479 670 TRFIPEVMSSNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFV--KMALP 731 (771)
Q Consensus 670 a~~~~~~~~~~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~--~~~~~ 731 (771)
|+...... ..+.+||+.||||| +||++|||++|+.||.+..... ..+.. ....+
T Consensus 339 A~~~~~~~------~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~--~~~i~~~i~~~~ 410 (689)
T 3v5w_A 339 ACDFSKKK------PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD--KHEIDRMTLTMA 410 (689)
T ss_dssp CEECSSCC------CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCC--HHHHHHHHHHCC
T ss_pred eeecCCCC------CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH--HHHHHHhhcCCC
Confidence 98765432 23468999999999 6999999999999997643222 22222 22233
Q ss_pred CchhhhcCccccccCcccChhchhhcCC-----HHHHH
Q 041479 732 DQILQVLDPLFLVGGVQEGEETAEENIK-----KGQIR 764 (771)
Q Consensus 732 ~~~~~~~~~~~~~~~~~cl~~~p~~Rpt-----~~~vl 764 (771)
...+..+++....+..+||++||++|++ +.||.
T Consensus 411 ~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~ 448 (689)
T 3v5w_A 411 VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVK 448 (689)
T ss_dssp CCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHT
T ss_pred CCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHh
Confidence 4455667777777788999999999998 56765
No 47
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=2.6e-37 Score=361.53 Aligned_cols=384 Identities=19% Similarity=0.183 Sum_probs=292.2
Q ss_pred CCcEEEEEcCCCCCcccCCccccCCCCCcEEEcCCCcccccCCccccCCCCCCEEecccCcCcccCCcc----------c
Q 041479 43 YQRVILLNLSGQNLTGTASPYIGNLTFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNALQGQIPDS----------R 112 (771)
Q Consensus 43 ~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~----------~ 112 (771)
.++++.|||++|+|+++.+.+|.++++|++|+|++|+|++..|++|.++++|++|+|++|++++..+.. .
T Consensus 75 l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~ 154 (635)
T 4g8a_A 75 FPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELN 154 (635)
T ss_dssp CTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEE
T ss_pred CCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeec
Confidence 468999999999999988889999999999999999999877788999999999999999988533321 1
Q ss_pred ccCCcccc-cCCccccCCCCCCEEecccccCcCCCCc-----------cceeeecccccccccCccccCCCCCCEEeccc
Q 041479 113 LILNKLEG-NIPSELGSLLKFKGLGLANNYFTGPIPH-----------LNMFQVSVYSLTGSIPIQLLNITSMEYFHVSE 180 (771)
Q Consensus 113 l~~n~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~lp~-----------L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~ 180 (771)
+..|.+++ ..|..++.+++|+.|++++|+|++..+. ...++++.|.++...+..+.. ..++.+++++
T Consensus 155 Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~~~-~~~~~l~l~~ 233 (635)
T 4g8a_A 155 VAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKE-IRLHKLTLRN 233 (635)
T ss_dssp CCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTTT-CEEEEEEEES
T ss_pred cccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccccCcccccc-hhhhhhhhhc
Confidence 44455544 3456666667777777777766643221 224555555554322221111 1112222222
Q ss_pred C-------------------------------------------------------------------------------
Q 041479 181 N------------------------------------------------------------------------------- 181 (771)
Q Consensus 181 N------------------------------------------------------------------------------- 181 (771)
|
T Consensus 234 n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~ 313 (635)
T 4g8a_A 234 NFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSL 313 (635)
T ss_dssp CCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEE
T ss_pred ccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhcccccccc
Confidence 2
Q ss_pred ---cCcccCChhhhhCCCCCcEEEeecCcccccCC-------------------ccccCCCCCCEEEccccccCCC--CC
Q 041479 182 ---QLVGELPPHIGFTLPNVRILLLAGNQFFGNIP-------------------HSISNASKLEWLDFANNSLTGL--IP 237 (771)
Q Consensus 182 ---~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p-------------------~~~~~l~~L~~L~Ls~N~l~~~--~p 237 (771)
.+. .++. + ....+|+.|++.+|.+.+..+ ..+..+++|+.|++++|.+... .+
T Consensus 314 ~~~~~~-~~~~-~-~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~~~~~ 390 (635)
T 4g8a_A 314 VSVTIE-RVKD-F-SYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFKGCCS 390 (635)
T ss_dssp ESCEEE-ECGG-G-GSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCCBCTTCCEEECCSSCCBEEEECC
T ss_pred cccccc-cccc-c-ccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCcccccccccccchhhccccccccccc
Confidence 111 1111 1 123455666666665543322 2334678899999999988643 23
Q ss_pred cCcccccCCCCCcEEEccCccccccCChhhhhcccccceeecccCcCcccCc-ccccccCCcceEecCCccceeccCccc
Q 041479 238 EDLDSLVNCTYLEVVSLSVNSLSGTLPNSLANFSSHLRYLYMSANPISGSIP-TEIGNLKNLIIIAIEKFILIRNIPISV 316 (771)
Q Consensus 238 ~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~l~~n~l~~~~p~~~ 316 (771)
.. ...+.+|++++++.|.+. .++..+..+. +|+.++++.|.+....+ ..|.++++++.++++.|.+....|..+
T Consensus 391 ~~---~~~~~~L~~L~~~~~~~~-~~~~~~~~l~-~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n~l~~~~~~~~ 465 (635)
T 4g8a_A 391 QS---DFGTISLKYLDLSFNGVI-TMSSNFLGLE-QLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIF 465 (635)
T ss_dssp HH---HHSCSCCCEEECCSCSEE-EECSCCTTCT-TCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTSCCEECCTTTT
T ss_pred cc---hhhhhhhhhhhccccccc-cccccccccc-cccchhhhhcccccccccccccccccccccccccccccccccccc
Confidence 32 356789999999999998 5566677765 79999999998876554 568999999999999999999999999
Q ss_pred cCCCCCCEEEccCCcc-cccCCcccccccccccccccCccceecCCcccccccce-eeecccCcccCCCCcCCCCCCCCC
Q 041479 317 GYLLKLQVLSLFENNI-SREIPSSLGNFTFLTELNLCGNSIRGSVPSALGSCHQL-WLDLSHNHLTGPIPLAVGNPKSIP 394 (771)
Q Consensus 317 ~~l~~L~~L~Ls~N~l-~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l-~L~Ls~N~l~~~~p~~~~~l~~L~ 394 (771)
..++.|+.|++++|++ ....|..|..+++|++|+|++|+|++..|..|..++.| .|+|++|+|++..|..|..+++|+
T Consensus 466 ~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~ 545 (635)
T 4g8a_A 466 NGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQ 545 (635)
T ss_dssp TTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCCGGGTTCTTCC
T ss_pred ccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCChhHHhCCCCCC
Confidence 9999999999999985 44678899999999999999999999999999999999 999999999999999999999999
Q ss_pred eEECCCCcccccCCcchhhhhccc-ccccEEECcCCCCCCCCCccc
Q 041479 395 HLDLSKNELSGEIPSSLAWIFGYI-SIFAKLNLSYNNLDGDVPRKM 439 (771)
Q Consensus 395 ~L~Ls~N~l~~~~p~~l~~~~~~l-~~L~~L~Ls~N~l~~~~p~~~ 439 (771)
+|||++|+|++..|..+. .+ ++|+.|+|++|+|+|.+.-.+
T Consensus 546 ~L~Ls~N~l~~~~~~~l~----~l~~~L~~L~L~~Np~~C~C~~~~ 587 (635)
T 4g8a_A 546 VLDYSLNHIMTSKKQELQ----HFPSSLAFLNLTQNDFACTCEHQS 587 (635)
T ss_dssp EEECTTSCCCBCCSSCTT----CCCTTCCEEECTTCCBCCSGGGHH
T ss_pred EEECCCCcCCCCCHHHHH----hhhCcCCEEEeeCCCCcccCCcHH
Confidence 999999999998898765 65 689999999999999987543
No 48
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=5.1e-38 Score=350.80 Aligned_cols=343 Identities=25% Similarity=0.296 Sum_probs=244.3
Q ss_pred CcEEEEEcCCCCCcccCCccccCCCCCcEEEcCCCcccccCCccccCCCCC-------------CEEecccCcCcc--cC
Q 041479 44 QRVILLNLSGQNLTGTASPYIGNLTFLRLINLQQNNFSSNIPHEIGRLFRL-------------RHIIFNSNALQG--QI 108 (771)
Q Consensus 44 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L-------------~~L~Ls~N~l~~--~~ 108 (771)
.+++.|++++|++ +.+|++|+.+++|++|++++|++++.+|.+++++++| ++|++++|.+++ .+
T Consensus 11 ~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~lp~~ 89 (454)
T 1jl5_A 11 TFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSSLPEL 89 (454)
T ss_dssp ------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSCCCSC
T ss_pred ccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCccccCCCC
Confidence 6899999999999 6899999999999999999999999999999999875 999999999987 22
Q ss_pred Cc----ccccCCcccccCCccccCCCCCCEEecccccCcC--CC-CccceeeecccccccccCccccCCCCCCEEecccC
Q 041479 109 PD----SRLILNKLEGNIPSELGSLLKFKGLGLANNYFTG--PI-PHLNMFQVSVYSLTGSIPIQLLNITSMEYFHVSEN 181 (771)
Q Consensus 109 p~----~~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~l-p~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N 181 (771)
|. ..+..|.+++ +|.. +++|+.|++++|++++ .+ +.|+.|++++|.+++ +| .+.++++|++|++++|
T Consensus 90 ~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~l~~~~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N 163 (454)
T 1jl5_A 90 PPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKALSDLPPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNN 163 (454)
T ss_dssp CTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSCCCSCCTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSS
T ss_pred cCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCcccCCCCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCC
Confidence 22 2367788887 6654 4789999999999986 33 579999999999997 67 6999999999999999
Q ss_pred cCcccCChhhhhCCCCCcEEEeecCcccccCCccccCCCCCCEEEccccccCCCCCcCcccccCCCCCcEEEccCccccc
Q 041479 182 QLVGELPPHIGFTLPNVRILLLAGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSLSG 261 (771)
Q Consensus 182 ~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~ 261 (771)
+++ .+|.. .++|++|++++|++++ +| .|.++++|++|++++|+++++ |.. .++|++|++++|.++
T Consensus 164 ~l~-~lp~~----~~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~l-~~~------~~~L~~L~l~~n~l~- 228 (454)
T 1jl5_A 164 SLK-KLPDL----PPSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKKL-PDL------PLSLESIVAGNNILE- 228 (454)
T ss_dssp CCS-CCCCC----CTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSSC-CCC------CTTCCEEECCSSCCS-
T ss_pred cCc-ccCCC----cccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCcC-CCC------cCcccEEECcCCcCC-
Confidence 998 57753 3589999999999996 56 699999999999999999874 432 257889999999988
Q ss_pred cCChhhhhcccccceeecccCcCcccCcccccccCCcceEecCCccceeccCccccCCCCCCEEEccCCcccccCCcccc
Q 041479 262 TLPNSLANFSSHLRYLYMSANPISGSIPTEIGNLKNLIIIAIEKFILIRNIPISVGYLLKLQVLSLFENNISREIPSSLG 341 (771)
Q Consensus 262 ~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 341 (771)
.+|. +..+. +|++|++++|++++ +|.. +++|+.|++++|.+.+ +|.. +++|+.|++++|++++. |..
T Consensus 229 ~lp~-~~~l~-~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l-~~~-- 295 (454)
T 1jl5_A 229 ELPE-LQNLP-FLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSGL-SEL-- 295 (454)
T ss_dssp SCCC-CTTCT-TCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSEE-SCC--
T ss_pred cccc-cCCCC-CCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCcc-cCc--
Confidence 7774 66665 79999999999985 4543 3788888998888865 4543 37788888888888752 221
Q ss_pred cccccccccccCccceecCCcccccccce-eeecccCcccCCCCcCCCCCCCCCeEECCCCcccccCCcchhhhhccccc
Q 041479 342 NFTFLTELNLCGNSIRGSVPSALGSCHQL-WLDLSHNHLTGPIPLAVGNPKSIPHLDLSKNELSGEIPSSLAWIFGYISI 420 (771)
Q Consensus 342 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~l~~ 420 (771)
.++|++|++++|++++. +.. ...+ .|++++|++++ +|.. +++|++|++++|+++ .+|. .+++
T Consensus 296 -~~~L~~L~l~~N~l~~i-~~~---~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~~N~l~-~lp~-------~l~~ 358 (454)
T 1jl5_A 296 -PPNLYYLNASSNEIRSL-CDL---PPSLEELNVSNNKLIE-LPAL---PPRLERLIASFNHLA-EVPE-------LPQN 358 (454)
T ss_dssp -CTTCCEEECCSSCCSEE-CCC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCS-CCCC-------CCTT
T ss_pred -CCcCCEEECcCCcCCcc-cCC---cCcCCEEECCCCcccc-cccc---CCcCCEEECCCCccc-cccc-------hhhh
Confidence 15677777777777752 211 1245 67777777775 4443 467777777777777 4554 2456
Q ss_pred ccEEECcCCCCCC--CCCcc
Q 041479 421 FAKLNLSYNNLDG--DVPRK 438 (771)
Q Consensus 421 L~~L~Ls~N~l~~--~~p~~ 438 (771)
|+.|++++|++++ .+|..
T Consensus 359 L~~L~L~~N~l~~l~~ip~~ 378 (454)
T 1jl5_A 359 LKQLHVEYNPLREFPDIPES 378 (454)
T ss_dssp CCEEECCSSCCSSCCCCCTT
T ss_pred ccEEECCCCCCCcCCCChHH
Confidence 7777777777776 55554
No 49
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=2.5e-38 Score=341.00 Aligned_cols=181 Identities=23% Similarity=0.312 Sum_probs=150.9
Q ss_pred cccccccccccceEEEEEec---CCCeEEEEEEeeccchhhHHHHHHHHHHHhcc-CCCCceeEEEEeecCCCCCceeEE
Q 041479 524 LLNVSYESLVKATVYKGILD---LDQTFIAVKVLFLHQRGALKSFMAECQALRNI-RHRNLVKIITACSTSDFQGNYFRA 599 (771)
Q Consensus 524 ~~~~~l~~~~~~~Vy~~~~~---~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~~~~ 599 (771)
.....+|+|.+|+||+|+++ .+++.||||++.... ...++.+|+++++.+ +|||||++++++.+.+ ..|
T Consensus 24 ~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~-----~~~ 96 (361)
T 4f9c_A 24 KIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKND-----HVV 96 (361)
T ss_dssp EEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETT-----EEE
T ss_pred EEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECC-----EEE
Confidence 34456899999999999875 346799999986543 346788999999998 6999999999998876 789
Q ss_pred EEEEeccCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCC-CceEEecccCccccCcccC
Q 041479 600 LVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDND-MTAHMGDFGLTRFIPEVMS 678 (771)
Q Consensus 600 lv~e~~~~g~L~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~-~~~kl~DfGla~~~~~~~~ 678 (771)
+|||||++|+|.++.+.+++.++..++.|++.||+|||+. +|+||||||+|||++.+ +.+||+|||+|+.......
T Consensus 97 lvmE~~~g~~L~~~~~~l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~ 173 (361)
T 4f9c_A 97 IAMPYLEHESFLDILNSLSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKI 173 (361)
T ss_dssp EEEECCCCCCHHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSC
T ss_pred EEEeCCCcccHHHHHcCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCccc
Confidence 9999999999998878899999999999999999999996 99999999999999876 7999999999986543211
Q ss_pred C------------------------cccccccccccccccchh----------------HHHHHHHHHhCCCCCCc
Q 041479 679 S------------------------NQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSD 714 (771)
Q Consensus 679 ~------------------------~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~ 714 (771)
. ........+||+.||||| +||++|||++|+.||..
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~ 249 (361)
T 4f9c_A 174 ELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYK 249 (361)
T ss_dssp GGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSC
T ss_pred cccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCC
Confidence 0 001123457999999999 69999999999999953
No 50
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=6.8e-38 Score=358.00 Aligned_cols=229 Identities=21% Similarity=0.200 Sum_probs=189.4
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
+.....+|+|.||+||+|+++.+++.||||++........+.+.+|+++|+.++|||||++++++.+.+ ..|+||
T Consensus 159 Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~-----~~~iv~ 233 (573)
T 3uto_A 159 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDN-----EMVMIY 233 (573)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSS-----EEEEEE
T ss_pred cEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECC-----EEEEEE
Confidence 334456899999999999999999999999997766666788999999999999999999999998876 789999
Q ss_pred EeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCC--CceEEecccCccccCcc
Q 041479 603 EFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDND--MTAHMGDFGLTRFIPEV 676 (771)
Q Consensus 603 e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~--~~~kl~DfGla~~~~~~ 676 (771)
|||+||+|.++ ...+++.++..++.||+.||+|||+. +|+||||||+|||++.+ +.+||+|||+|+.+...
T Consensus 234 E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~ 310 (573)
T 3uto_A 234 EFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPK 310 (573)
T ss_dssp ECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTT
T ss_pred eecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeeccceeEccCC
Confidence 99999999665 34688999999999999999999996 99999999999999854 89999999999976543
Q ss_pred cCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhC--CCchhhhcC
Q 041479 677 MSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMAL--PDQILQVLD 739 (771)
Q Consensus 677 ~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 739 (771)
.. ....+||+.||||| +||++|||++|+.||.+.... ..+..+..... +......++
T Consensus 311 ~~-----~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s 384 (573)
T 3uto_A 311 QS-----VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDD-ETLRNVKSCDWNMDDSAFSGIS 384 (573)
T ss_dssp SE-----EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH-HHHHHHHTTCCCCCSGGGTTSC
T ss_pred Cc-----eeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHH-HHHHHHHhCCCCCCcccccCCC
Confidence 22 22457999999999 699999999999999764221 12333333332 344445566
Q ss_pred ccccccCcccChhchhhcCCHHHHHH
Q 041479 740 PLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 740 ~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
+....+..+||+.||++|||+.|+++
T Consensus 385 ~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 385 EDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp HHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHHccCChhHCcCHHHHhc
Confidence 66667777999999999999999986
No 51
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.9e-37 Score=347.54 Aligned_cols=342 Identities=18% Similarity=0.186 Sum_probs=249.0
Q ss_pred cceeeeecCC---------CCcEEEEEcCCCCCcccCCccccCCCCCcEEEcCCCcccccCCccccCCCCCCEEecccCc
Q 041479 33 QWLGVTCSLK---------YQRVILLNLSGQNLTGTASPYIGNLTFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNA 103 (771)
Q Consensus 33 ~w~~v~c~~~---------~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 103 (771)
.|..|.|... ..+++.|+|++|++++..+..|..+++|++|+|++|.|++..|.+|+++++|++|+|++|+
T Consensus 12 ~~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~ 91 (477)
T 2id5_A 12 QDRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNR 91 (477)
T ss_dssp TTTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CCCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCc
Confidence 4778888643 2578999999999999989999999999999999999999889999999999999999999
Q ss_pred CcccCCcccccCCcccccCCccccCCCCCCEEecccccCcCCCCccceeeecccccccccCccccCCCCCCEEecccCcC
Q 041479 104 LQGQIPDSRLILNKLEGNIPSELGSLLKFKGLGLANNYFTGPIPHLNMFQVSVYSLTGSIPIQLLNITSMEYFHVSENQL 183 (771)
Q Consensus 104 l~~~~p~~~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l 183 (771)
++ +..+..|.++++|+.|+|++|++++ ..|..|.++++|++|++++|.+
T Consensus 92 l~--------------~~~~~~~~~l~~L~~L~Ls~n~i~~-----------------~~~~~~~~l~~L~~L~l~~n~l 140 (477)
T 2id5_A 92 LK--------------LIPLGVFTGLSNLTKLDISENKIVI-----------------LLDYMFQDLYNLKSLEVGDNDL 140 (477)
T ss_dssp CC--------------SCCTTSSTTCTTCCEEECTTSCCCE-----------------ECTTTTTTCTTCCEEEECCTTC
T ss_pred CC--------------ccCcccccCCCCCCEEECCCCcccc-----------------CChhHccccccCCEEECCCCcc
Confidence 76 2334468899999999999998873 4566788889999999999998
Q ss_pred cccCChhhhhCCCCCcEEEeecCcccccCCccccCCCCCCEEEccccccCCCCCcCcccccCCCCCcEEEccCccccccC
Q 041479 184 VGELPPHIGFTLPNVRILLLAGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSLSGTL 263 (771)
Q Consensus 184 ~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~ 263 (771)
++ +++..+..+++|+.|+|++|++++..+..|.++++|+.|+|++|.++++.+..| ..+++|+.|++++|.+.+.+
T Consensus 141 ~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~---~~l~~L~~L~l~~~~~~~~~ 216 (477)
T 2id5_A 141 VY-ISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSF---KRLYRLKVLEISHWPYLDTM 216 (477)
T ss_dssp CE-ECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCS---CSCTTCCEEEEECCTTCCEE
T ss_pred ce-eChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhc---ccCcccceeeCCCCcccccc
Confidence 84 444444488899999999999987777778899999999999999988777665 77788999999998887788
Q ss_pred ChhhhhcccccceeecccCcCcccCcccccccCCcceEecCCccceeccCccccCCCCCCEEEccCCcccccCCcccccc
Q 041479 264 PNSLANFSSHLRYLYMSANPISGSIPTEIGNLKNLIIIAIEKFILIRNIPISVGYLLKLQVLSLFENNISREIPSSLGNF 343 (771)
Q Consensus 264 p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 343 (771)
|....... +|++|++++|+|++..+..|..+++|+.|++++|.+.+..+..|..+++|+.|+|++|++++..|..|..+
T Consensus 217 ~~~~~~~~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 295 (477)
T 2id5_A 217 TPNCLYGL-NLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGL 295 (477)
T ss_dssp CTTTTTTC-CCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTC
T ss_pred CcccccCc-cccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCc
Confidence 87776655 78899999988885444556666666655555555555444445555555555555555554444455555
Q ss_pred cccccccccCccceecCCcccccccceeeecccCcccCCCCcCCCCCCCCCeEECCCCcccccCCcchhhhhcccccccE
Q 041479 344 TFLTELNLCGNSIRGSVPSALGSCHQLWLDLSHNHLTGPIPLAVGNPKSIPHLDLSKNELSGEIPSSLAWIFGYISIFAK 423 (771)
Q Consensus 344 ~~L~~L~Ls~N~l~~~~p~~~~~l~~l~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~l~~L~~ 423 (771)
++|+.|+|++|+ |++..+..|..+++|++|+|++|+++...+ +.|.+.. +..
T Consensus 296 ~~L~~L~L~~N~-----------------------l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~--~~~~~~~---~~~ 347 (477)
T 2id5_A 296 NYLRVLNVSGNQ-----------------------LTTLEESVFHSVGNLETLILDSNPLACDCR--LLWVFRR---RWR 347 (477)
T ss_dssp TTCCEEECCSSC-----------------------CSCCCGGGBSCGGGCCEEECCSSCEECSGG--GHHHHTT---TTS
T ss_pred ccCCEEECCCCc-----------------------CceeCHhHcCCCcccCEEEccCCCccCccc--hHhHHhh---hhc
Confidence 555544444444 444444556666677777777777764322 2333322 233
Q ss_pred EECcCCCCCCCCCcc
Q 041479 424 LNLSYNNLDGDVPRK 438 (771)
Q Consensus 424 L~Ls~N~l~~~~p~~ 438 (771)
+++.++...|..|..
T Consensus 348 ~~~~~~~~~C~~p~~ 362 (477)
T 2id5_A 348 LNFNRQQPTCATPEF 362 (477)
T ss_dssp SCCTTCCCBEEESGG
T ss_pred cccCccCceeCCchH
Confidence 445566666655554
No 52
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=2.9e-36 Score=339.07 Aligned_cols=338 Identities=26% Similarity=0.349 Sum_probs=275.1
Q ss_pred CcEEEEEcCCCCCcccCCccccCCCCCcEEEcCCCcccccCCccccCCCCCCEEecccCcCcccCCcccccCCcccccCC
Q 041479 44 QRVILLNLSGQNLTGTASPYIGNLTFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNALQGQIPDSRLILNKLEGNIP 123 (771)
Q Consensus 44 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~l~~n~l~~~~p 123 (771)
.+++.|+++++.++.. | .+..+++|++|+|++|.+++. |. |.++++|++|++++|.++ .++
T Consensus 46 ~~l~~L~l~~~~i~~l-~-~~~~l~~L~~L~Ls~n~l~~~-~~-~~~l~~L~~L~l~~n~l~---------------~~~ 106 (466)
T 1o6v_A 46 DQVTTLQADRLGIKSI-D-GVEYLNNLTQINFSNNQLTDI-TP-LKNLTKLVDILMNNNQIA---------------DIT 106 (466)
T ss_dssp HTCCEEECCSSCCCCC-T-TGGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCC---------------CCG
T ss_pred ccccEEecCCCCCccC-c-chhhhcCCCEEECCCCccCCc-hh-hhccccCCEEECCCCccc---------------cCh
Confidence 5789999999999854 3 488999999999999999974 44 999999999999999976 233
Q ss_pred ccccCCCCCCEEecccccCcC-----CCCccceeeecccccccccCccccCCCCCCEEecccCcCcccCChhhhhCCCCC
Q 041479 124 SELGSLLKFKGLGLANNYFTG-----PIPHLNMFQVSVYSLTGSIPIQLLNITSMEYFHVSENQLVGELPPHIGFTLPNV 198 (771)
Q Consensus 124 ~~~~~l~~L~~L~Ls~N~l~~-----~lp~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L 198 (771)
. ++++++|++|++++|++++ .++.|+.|+++.|.+++. + .+.++++|++|+++ |.+. .+++ + ..+++|
T Consensus 107 ~-~~~l~~L~~L~L~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~-~-~~~~l~~L~~L~l~-~~~~-~~~~-~-~~l~~L 179 (466)
T 1o6v_A 107 P-LANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDI-S-ALSGLTSLQQLSFG-NQVT-DLKP-L-ANLTTL 179 (466)
T ss_dssp G-GTTCTTCCEEECCSSCCCCCGGGTTCTTCSEEEEEEEEECCC-G-GGTTCTTCSEEEEE-ESCC-CCGG-G-TTCTTC
T ss_pred h-hcCCCCCCEEECCCCCCCCChHHcCCCCCCEEECCCCccCCC-h-hhccCCcccEeecC-Cccc-Cchh-h-ccCCCC
Confidence 3 8899999999999999874 456788889998888763 3 48888999999986 5665 3443 4 388899
Q ss_pred cEEEeecCcccccCCccccCCCCCCEEEccccccCCCCCcCcccccCCCCCcEEEccCccccccCChhhhhcccccceee
Q 041479 199 RILLLAGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSLSGTLPNSLANFSSHLRYLY 278 (771)
Q Consensus 199 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~ 278 (771)
+.|++++|++++. ..+..+++|++|++++|.+++..| + ..+++|+.|++++|++++ ++ .+..+. +|++|+
T Consensus 180 ~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~---~~l~~L~~L~l~~n~l~~-~~-~l~~l~-~L~~L~ 249 (466)
T 1o6v_A 180 ERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--L---GILTNLDELSLNGNQLKD-IG-TLASLT-NLTDLD 249 (466)
T ss_dssp CEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--G---GGCTTCCEEECCSSCCCC-CG-GGGGCT-TCSEEE
T ss_pred CEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc--c---cccCCCCEEECCCCCccc-ch-hhhcCC-CCCEEE
Confidence 9999999998754 358888999999999999887655 3 667889999999999883 43 466664 799999
Q ss_pred cccCcCcccCcccccccCCcceEecCCccceeccCccccCCCCCCEEEccCCcccccCCcccccccccccccccCcccee
Q 041479 279 MSANPISGSIPTEIGNLKNLIIIAIEKFILIRNIPISVGYLLKLQVLSLFENNISREIPSSLGNFTFLTELNLCGNSIRG 358 (771)
Q Consensus 279 Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 358 (771)
+++|.+++..| +..+++|+.|++++|.+.+..+ +..+++|+.|++++|++++..| +..+++|+.|++++|++++
T Consensus 250 l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~ 323 (466)
T 1o6v_A 250 LANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISD 323 (466)
T ss_dssp CCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSC
T ss_pred CCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCC
Confidence 99999986554 8888999999999998876544 7888999999999999986544 7888999999999999987
Q ss_pred cCCcccccccce-eeecccCcccCCCCcCCCCCCCCCeEECCCCcccccCCcchhhhhcccccccEEECcCCCCCC
Q 041479 359 SVPSALGSCHQL-WLDLSHNHLTGPIPLAVGNPKSIPHLDLSKNELSGEIPSSLAWIFGYISIFAKLNLSYNNLDG 433 (771)
Q Consensus 359 ~~p~~~~~l~~l-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~l~~L~~L~Ls~N~l~~ 433 (771)
..| +..++.| .|++++|++++. ..+..+++|+.|++++|++++..| +. .+++|+.|++++|++++
T Consensus 324 ~~~--~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~----~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 324 ISP--VSSLTKLQRLFFYNNKVSDV--SSLANLTNINWLSAGHNQISDLTP--LA----NLTRITQLGLNDQAWTN 389 (466)
T ss_dssp CGG--GGGCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCBCGG--GT----TCTTCCEEECCCEEEEC
T ss_pred chh--hccCccCCEeECCCCccCCc--hhhccCCCCCEEeCCCCccCccch--hh----cCCCCCEEeccCCcccC
Confidence 665 6778888 899999998865 467888999999999999987766 33 78889999999998886
No 53
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=1e-36 Score=340.64 Aligned_cols=333 Identities=20% Similarity=0.236 Sum_probs=233.0
Q ss_pred CCcEEEEEcCCCCCcccCCccccCCCCCcEEEcCCCcccccCCccccCCCCCCEEecccCcCcccCCcccccCCcccccC
Q 041479 43 YQRVILLNLSGQNLTGTASPYIGNLTFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNALQGQIPDSRLILNKLEGNI 122 (771)
Q Consensus 43 ~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~l~~n~l~~~~ 122 (771)
..+++.|+|++|++++. | .|+.+++|++|+|++|+|++ +| |+.+++|++|++++|++++ +
T Consensus 41 l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~---------------~ 100 (457)
T 3bz5_A 41 LATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTN---------------L 100 (457)
T ss_dssp HTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSC---------------C
T ss_pred cCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCce---------------e
Confidence 37899999999999975 4 79999999999999999997 45 9999999999999999762 3
Q ss_pred CccccCCCCCCEEecccccCcC----CCCccceeeecccccccccCccccCCCCCCEEecccCcCcccCChhhhhCCCCC
Q 041479 123 PSELGSLLKFKGLGLANNYFTG----PIPHLNMFQVSVYSLTGSIPIQLLNITSMEYFHVSENQLVGELPPHIGFTLPNV 198 (771)
Q Consensus 123 p~~~~~l~~L~~L~Ls~N~l~~----~lp~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L 198 (771)
| ++++++|++|++++|++++ .++.|+.|+++.|.+++. .+.++++|++|++++|+..+.++ +. .+++|
T Consensus 101 ~--~~~l~~L~~L~L~~N~l~~l~~~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~~~~~~--~~-~l~~L 172 (457)
T 3bz5_A 101 D--VTPLTKLTYLNCDTNKLTKLDVSQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKITKLD--VT-PQTQL 172 (457)
T ss_dssp C--CTTCTTCCEEECCSSCCSCCCCTTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECTTCSCCCCCC--CT-TCTTC
T ss_pred e--cCCCCcCCEEECCCCcCCeecCCCCCcCCEEECCCCcccee---ccccCCcCCEEECCCCCcccccc--cc-cCCcC
Confidence 3 8889999999999999984 456788888888888874 37788888888888886655663 33 77888
Q ss_pred cEEEeecCcccccCCccccCCCCCCEEEccccccCCCCCcCcccccCCCCCcEEEccCccccccCChhhhhcccccceee
Q 041479 199 RILLLAGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSLSGTLPNSLANFSSHLRYLY 278 (771)
Q Consensus 199 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~ 278 (771)
+.|++++|+|++ +| +..+++|+.|++++|++++. . +..+++|+.|++++|++++ +| +..+. +|++|+
T Consensus 173 ~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~---l~~l~~L~~L~Ls~N~l~~-ip--~~~l~-~L~~L~ 239 (457)
T 3bz5_A 173 TTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---D---LNQNIQLTFLDCSSNKLTE-ID--VTPLT-QLTYFD 239 (457)
T ss_dssp CEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---C---CTTCTTCSEEECCSSCCSC-CC--CTTCT-TCSEEE
T ss_pred CEEECCCCccce-ec--cccCCCCCEEECcCCcCCee---c---cccCCCCCEEECcCCcccc-cC--ccccC-CCCEEE
Confidence 888888888886 44 77888888888888888875 1 3677888888888888885 66 55654 788888
Q ss_pred cccCcCcccCcccccccC-------CcceEecCCccceeccCccccCCCCCCEEEccCCcccccCCcccccccccccccc
Q 041479 279 MSANPISGSIPTEIGNLK-------NLIIIAIEKFILIRNIPISVGYLLKLQVLSLFENNISREIPSSLGNFTFLTELNL 351 (771)
Q Consensus 279 Ls~N~l~~~~p~~~~~l~-------~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 351 (771)
+++|++++..+..+.+++ +|+.|++++|.+.+.+| ++.+++|+.|++++|.+.+.+|.. ..+|+.|++
T Consensus 240 l~~N~l~~~~~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~~---~~~L~~L~l 314 (457)
T 3bz5_A 240 CSVNPLTELDVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDCQ---AAGITELDL 314 (457)
T ss_dssp CCSSCCSCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEECT---TCCCSCCCC
T ss_pred eeCCcCCCcCHHHCCCCCEEeccCCCCCEEECCCCccCCccc--ccccccCCEEECCCCcccceeccC---CCcceEech
Confidence 888888876544444443 34445555555444444 344556666666666554444421 122222222
Q ss_pred cCccceecCCcccccccce-eeecccCcccCCCCcCCCCCCCCCeEECCCCcccccCCcchhhh---------hcccccc
Q 041479 352 CGNSIRGSVPSALGSCHQL-WLDLSHNHLTGPIPLAVGNPKSIPHLDLSKNELSGEIPSSLAWI---------FGYISIF 421 (771)
Q Consensus 352 s~N~l~~~~p~~~~~l~~l-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~---------~~~l~~L 421 (771)
+ .++.| .|++++|+|++. + ++.+++|+.|++++|+|++ +|. +..+ ...+..|
T Consensus 315 ~-------------~~~~L~~L~L~~N~l~~l-~--l~~l~~L~~L~l~~N~l~~-l~~-L~~L~l~~n~l~g~~~~~~l 376 (457)
T 3bz5_A 315 S-------------QNPKLVYLYLNNTELTEL-D--VSHNTKLKSLSCVNAHIQD-FSS-VGKIPALNNNFEAEGQTITM 376 (457)
T ss_dssp T-------------TCTTCCEEECTTCCCSCC-C--CTTCTTCSEEECCSSCCCB-CTT-GGGSSGGGTSEEEEEEEEEC
T ss_pred h-------------hcccCCEEECCCCccccc-c--cccCCcCcEEECCCCCCCC-ccc-cccccccCCcEEecceeeec
Confidence 2 22344 566666666653 2 5566666666666666664 221 1000 0133556
Q ss_pred cEEECcCCCCCCCCCccc
Q 041479 422 AKLNLSYNNLDGDVPRKM 439 (771)
Q Consensus 422 ~~L~Ls~N~l~~~~p~~~ 439 (771)
..+++++|+++|.+|..+
T Consensus 377 ~~l~l~~N~l~g~ip~~~ 394 (457)
T 3bz5_A 377 PKETLTNNSLTIAVSPDL 394 (457)
T ss_dssp CCBCCBTTBEEEECCTTC
T ss_pred CccccccCcEEEEcChhH
Confidence 777888888888888653
No 54
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.2e-36 Score=323.42 Aligned_cols=237 Identities=22% Similarity=0.347 Sum_probs=191.5
Q ss_pred cccccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEE
Q 041479 522 DLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALV 601 (771)
Q Consensus 522 ~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv 601 (771)
.+.....+|+|.+|+||+|++..+++.||||++........+.|.+|++++++++||||+++++++.+.+ ..++|
T Consensus 11 ~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-----~~~lv 85 (310)
T 3s95_A 11 DLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDK-----RLNFI 85 (310)
T ss_dssp GEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT-----EEEEE
T ss_pred HeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCC-----eeEEE
Confidence 3445567899999999999999999999999997666667789999999999999999999999998776 78999
Q ss_pred EEeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCccc
Q 041479 602 YEFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVM 677 (771)
Q Consensus 602 ~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~ 677 (771)
|||+++|+|.++ ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 86 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 162 (310)
T 3s95_A 86 TEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEK 162 (310)
T ss_dssp EECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCTTCEECC---
T ss_pred EEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecccceeccccc
Confidence 999999999776 35689999999999999999999996 89999999999999999999999999998664332
Q ss_pred CCc----------ccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccC----CccHHHHHHh
Q 041479 678 SSN----------QCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTE----GLDLHNFVKM 728 (771)
Q Consensus 678 ~~~----------~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~----~~~~~~~~~~ 728 (771)
... .......+||+.|+||| +||++||+++|..|+.+.... ..........
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~ 242 (310)
T 3s95_A 163 TQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDR 242 (310)
T ss_dssp -----------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHHH
T ss_pred ccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhccccc
Confidence 211 01112457999999999 799999999999998653322 2233333333
Q ss_pred hCCCchhhhcCccccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 729 ALPDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 729 ~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
..+ ..+++.+.....+||+.||++|||+.++++.|+++
T Consensus 243 ~~~----~~~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l 280 (310)
T 3s95_A 243 YCP----PNCPPSFFPITVRCCDLDPEKRPSFVKLEHWLETL 280 (310)
T ss_dssp TCC----TTCCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred cCC----CCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 333 33445555666799999999999999999999875
No 55
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=1.6e-35 Score=333.10 Aligned_cols=320 Identities=26% Similarity=0.403 Sum_probs=276.8
Q ss_pred CCcEEEEEcCCCCCcccCCccccCCCCCcEEEcCCCcccccCCccccCCCCCCEEecccCcCcccCCcccccCCcccccC
Q 041479 43 YQRVILLNLSGQNLTGTASPYIGNLTFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNALQGQIPDSRLILNKLEGNI 122 (771)
Q Consensus 43 ~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~l~~n~l~~~~ 122 (771)
..+++.|+|++|++++..+ +..+++|++|+|++|++++..| |+++++|++|++++|.++ .+
T Consensus 67 l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~---------------~~ 127 (466)
T 1o6v_A 67 LNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADITP--LANLTNLTGLTLFNNQIT---------------DI 127 (466)
T ss_dssp CTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC---------------CC
T ss_pred hcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccChh--hcCCCCCCEEECCCCCCC---------------CC
Confidence 4689999999999997654 9999999999999999997544 999999999999999976 23
Q ss_pred CccccCCCCCCEEecccccCcC-----CCCccceeeecccccccccCccccCCCCCCEEecccCcCcccCChhhhhCCCC
Q 041479 123 PSELGSLLKFKGLGLANNYFTG-----PIPHLNMFQVSVYSLTGSIPIQLLNITSMEYFHVSENQLVGELPPHIGFTLPN 197 (771)
Q Consensus 123 p~~~~~l~~L~~L~Ls~N~l~~-----~lp~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~ 197 (771)
+. +.++++|+.|++++|++++ .++.|+.++++ |.+.+..+ +.++++|++|++++|.++ .++. + ..+++
T Consensus 128 ~~-~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~-~~~~~~~~--~~~l~~L~~L~l~~n~l~-~~~~-l-~~l~~ 200 (466)
T 1o6v_A 128 DP-LKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG-NQVTDLKP--LANLTTLERLDISSNKVS-DISV-L-AKLTN 200 (466)
T ss_dssp GG-GTTCTTCSEEEEEEEEECCCGGGTTCTTCSEEEEE-ESCCCCGG--GTTCTTCCEEECCSSCCC-CCGG-G-GGCTT
T ss_pred hH-HcCCCCCCEEECCCCccCCChhhccCCcccEeecC-CcccCchh--hccCCCCCEEECcCCcCC-CChh-h-ccCCC
Confidence 33 8899999999999999874 46679999996 55654433 889999999999999998 5654 4 48999
Q ss_pred CcEEEeecCcccccCCccccCCCCCCEEEccccccCCCCCcCcccccCCCCCcEEEccCccccccCChhhhhccccccee
Q 041479 198 VRILLLAGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSLSGTLPNSLANFSSHLRYL 277 (771)
Q Consensus 198 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L 277 (771)
|++|++++|++++..| +..+++|+.|++++|++++. ..+..+++|+.|++++|.+++..| +..+. +|++|
T Consensus 201 L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-----~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~-~L~~L 270 (466)
T 1o6v_A 201 LESLIATNNQISDITP--LGILTNLDELSLNGNQLKDI-----GTLASLTNLTDLDLANNQISNLAP--LSGLT-KLTEL 270 (466)
T ss_dssp CSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCC-----GGGGGCTTCSEEECCSSCCCCCGG--GTTCT-TCSEE
T ss_pred CCEEEecCCccccccc--ccccCCCCEEECCCCCcccc-----hhhhcCCCCCEEECCCCccccchh--hhcCC-CCCEE
Confidence 9999999999997665 78899999999999999865 234788999999999999995444 66665 89999
Q ss_pred ecccCcCcccCcccccccCCcceEecCCccceeccCccccCCCCCCEEEccCCcccccCCcccccccccccccccCccce
Q 041479 278 YMSANPISGSIPTEIGNLKNLIIIAIEKFILIRNIPISVGYLLKLQVLSLFENNISREIPSSLGNFTFLTELNLCGNSIR 357 (771)
Q Consensus 278 ~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 357 (771)
++++|.+++..+ +..+++|+.|++++|.+.+..+ +..+++|+.|++++|++++..| +..+++|+.|++++|+++
T Consensus 271 ~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~ 344 (466)
T 1o6v_A 271 KLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVS 344 (466)
T ss_dssp ECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCC
T ss_pred ECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccC
Confidence 999999996554 8999999999999999977554 8899999999999999997665 889999999999999999
Q ss_pred ecCCcccccccce-eeecccCcccCCCCcCCCCCCCCCeEECCCCcccccCCc
Q 041479 358 GSVPSALGSCHQL-WLDLSHNHLTGPIPLAVGNPKSIPHLDLSKNELSGEIPS 409 (771)
Q Consensus 358 ~~~p~~~~~l~~l-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 409 (771)
+. ..+..++.| .|++++|++++..| +..+++|+.|++++|++++ .|.
T Consensus 345 ~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~~-~p~ 392 (466)
T 1o6v_A 345 DV--SSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTN-APV 392 (466)
T ss_dssp CC--GGGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEEC-CCB
T ss_pred Cc--hhhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCcccC-Cch
Confidence 65 468889999 89999999998877 8899999999999999995 444
No 56
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=3.3e-36 Score=317.82 Aligned_cols=231 Identities=21% Similarity=0.245 Sum_probs=189.8
Q ss_pred cccccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEE
Q 041479 522 DLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALV 601 (771)
Q Consensus 522 ~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv 601 (771)
.+.....+|+|.+|+||+|++..+++.||||++........+.+.+|+.++++++|||||++++++...+ ..|+|
T Consensus 21 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-----~~~lv 95 (297)
T 3fxz_A 21 KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGD-----ELWVV 95 (297)
T ss_dssp TBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETT-----EEEEE
T ss_pred ceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECC-----EEEEE
Confidence 3444556899999999999999999999999998776666788999999999999999999999998876 78999
Q ss_pred EEeccCCCCCCC--cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCC
Q 041479 602 YEFMHHGSLESC--PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSS 679 (771)
Q Consensus 602 ~e~~~~g~L~~~--~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 679 (771)
|||+++|+|.++ ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 96 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 171 (297)
T 3fxz_A 96 MEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS- 171 (297)
T ss_dssp EECCTTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC-
T ss_pred EECCCCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCCCceecCCccc-
Confidence 999999999877 34588999999999999999999996 999999999999999999999999999986554322
Q ss_pred cccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCC-CchhhhcCcccc
Q 041479 680 NQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALP-DQILQVLDPLFL 743 (771)
Q Consensus 680 ~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 743 (771)
.....+||+.|+||| +||++|||++|+.||.+..... ..........+ ...+..+++.+.
T Consensus 172 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 247 (297)
T 3fxz_A 172 ---KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLR-ALYLIATNGTPELQNPEKLSAIFR 247 (297)
T ss_dssp ---CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHHHCSCCCSCGGGSCHHHH
T ss_pred ---ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHhCCCCCCCCccccCHHHH
Confidence 223457999999999 6999999999999997532211 12222222222 333455666666
Q ss_pred ccCcccChhchhhcCCHHHHHH
Q 041479 744 VGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 744 ~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
....+||+.||++|||+.|+++
T Consensus 248 ~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 248 DFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp HHHHHHSCSSTTTSCCHHHHTT
T ss_pred HHHHHHccCChhHCcCHHHHhh
Confidence 6777999999999999999975
No 57
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=1e-35 Score=323.97 Aligned_cols=239 Identities=22% Similarity=0.299 Sum_probs=192.3
Q ss_pred ccccccccccccccceEEEEEec-------CCCeEEEEEEeeccc-hhhHHHHHHHHHHHhcc-CCCCceeEEEEeecCC
Q 041479 521 KDLLLNVSYESLVKATVYKGILD-------LDQTFIAVKVLFLHQ-RGALKSFMAECQALRNI-RHRNLVKIITACSTSD 591 (771)
Q Consensus 521 ~~~~~~~~l~~~~~~~Vy~~~~~-------~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~ 591 (771)
..+.....+|+|.+|+||+|++. .++..||||++.... ....+++.+|+++++++ +|||||++++++.+.+
T Consensus 81 ~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~ 160 (370)
T 2psq_A 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 160 (370)
T ss_dssp GGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSS
T ss_pred HHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCC
Confidence 34445567999999999999874 245689999996543 44567899999999999 8999999999998766
Q ss_pred CCCceeEEEEEEeccCCCCCCCc-------------------ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCC
Q 041479 592 FQGNYFRALVYEFMHHGSLESCP-------------------RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPS 652 (771)
Q Consensus 592 ~~~~~~~~lv~e~~~~g~L~~~~-------------------~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~ 652 (771)
..|+||||+++|+|.++. ..+++.++..++.|++.||+|||+. +|+||||||+
T Consensus 161 -----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~ 232 (370)
T 2psq_A 161 -----PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAAR 232 (370)
T ss_dssp -----SCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGG
T ss_pred -----CEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---Ceeccccchh
Confidence 679999999999997651 2478899999999999999999996 9999999999
Q ss_pred CeeeCCCCceEEecccCccccCcccCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccc
Q 041479 653 NVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMF 716 (771)
Q Consensus 653 NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~ 716 (771)
|||++.++.+||+|||+++........ .......||+.|+||| |||++|||++ |+.||.+..
T Consensus 233 NIll~~~~~~kl~DFG~a~~~~~~~~~--~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~ 310 (370)
T 2psq_A 233 NVLVTENNVMKIADFGLARDINNIDYY--KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP 310 (370)
T ss_dssp GEEECTTCCEEECCCSSCEETTCCCTT--CTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred hEEECCCCCEEEccccCCcccCcccce--ecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCC
Confidence 999999999999999999866543221 1223345789999999 6999999999 999997642
Q ss_pred cCCccHHHHHHhhCCCchhhhcCccccccCcccChhchhhcCCHHHHHHHHHHhC
Q 041479 717 TEGLDLHNFVKMALPDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAIL 771 (771)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~l 771 (771)
. ..+............+..+++.+...+.+||+.||++|||+.|+++.|++++
T Consensus 311 ~--~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~L~~il 363 (370)
T 2psq_A 311 V--EELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 363 (370)
T ss_dssp G--GGHHHHHHTTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred H--HHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 2 2344444444444445556666767777999999999999999999999874
No 58
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=2.6e-35 Score=323.65 Aligned_cols=308 Identities=16% Similarity=0.174 Sum_probs=266.8
Q ss_pred CcEEEEEcCCCCCcccCCccccCCCCCcEEEcCCCcccccCCccccCCCCCCEEecccCcCcccCCcccccCCcccccCC
Q 041479 44 QRVILLNLSGQNLTGTASPYIGNLTFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNALQGQIPDSRLILNKLEGNIP 123 (771)
Q Consensus 44 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~l~~n~l~~~~p 123 (771)
.+++.|++++|.++.+++..|..+++|++|+|++|.+++..|.+|+.+++|++|+|++|.++ +..|
T Consensus 45 ~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~--------------~~~~ 110 (390)
T 3o6n_A 45 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIR--------------YLPP 110 (390)
T ss_dssp CCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCC--------------CCCT
T ss_pred CCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCC--------------cCCH
Confidence 68899999999999777777899999999999999999888889999999999999999965 3556
Q ss_pred ccccCCCCCCEEecccccCcCCCCccceeeecccccccccCcc-ccCCCCCCEEecccCcCcccCChhhhhCCCCCcEEE
Q 041479 124 SELGSLLKFKGLGLANNYFTGPIPHLNMFQVSVYSLTGSIPIQ-LLNITSMEYFHVSENQLVGELPPHIGFTLPNVRILL 202 (771)
Q Consensus 124 ~~~~~l~~L~~L~Ls~N~l~~~lp~L~~l~l~~n~l~~~~p~~-~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~ 202 (771)
..|+++++|++|+|++|+++ .+|.. |.++++|++|++++|+++ .+++..+..+++|++|+
T Consensus 111 ~~~~~l~~L~~L~L~~n~l~------------------~l~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~ 171 (390)
T 3o6n_A 111 HVFQNVPLLTVLVLERNDLS------------------SLPRGIFHNTPKLTTLSMSNNNLE-RIEDDTFQATTSLQNLQ 171 (390)
T ss_dssp TTTTTCTTCCEEECCSSCCC------------------CCCTTTTTTCTTCCEEECCSSCCC-BCCTTTTSSCTTCCEEE
T ss_pred HHhcCCCCCCEEECCCCccC------------------cCCHHHhcCCCCCcEEECCCCccC-ccChhhccCCCCCCEEE
Confidence 77899999999999999987 34444 688999999999999999 56555455899999999
Q ss_pred eecCcccccCCccccCCCCCCEEEccccccCCCCCcCcccccCCCCCcEEEccCccccccCChhhhhcccccceeecccC
Q 041479 203 LAGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSLSGTLPNSLANFSSHLRYLYMSAN 282 (771)
Q Consensus 203 L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N 282 (771)
+++|++++. .+..+++|+.|++++|.+++. ...++|+.|++++|.++ .+|.... ++|+.|++++|
T Consensus 172 l~~n~l~~~---~~~~l~~L~~L~l~~n~l~~~--------~~~~~L~~L~l~~n~l~-~~~~~~~---~~L~~L~l~~n 236 (390)
T 3o6n_A 172 LSSNRLTHV---DLSLIPSLFHANVSYNLLSTL--------AIPIAVEELDASHNSIN-VVRGPVN---VELTILKLQHN 236 (390)
T ss_dssp CCSSCCSBC---CGGGCTTCSEEECCSSCCSEE--------ECCSSCSEEECCSSCCC-EEECCCC---SSCCEEECCSS
T ss_pred CCCCcCCcc---ccccccccceeeccccccccc--------CCCCcceEEECCCCeee-ecccccc---ccccEEECCCC
Confidence 999999865 366789999999999998754 23467999999999998 4454332 47999999999
Q ss_pred cCcccCcccccccCCcceEecCCccceeccCccccCCCCCCEEEccCCcccccCCcccccccccccccccCccceecCCc
Q 041479 283 PISGSIPTEIGNLKNLIIIAIEKFILIRNIPISVGYLLKLQVLSLFENNISREIPSSLGNFTFLTELNLCGNSIRGSVPS 362 (771)
Q Consensus 283 ~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 362 (771)
.+++. ..+..+++|+.|++++|.+.+..|..+..+++|+.|+|++|++++ +|..+..+++|++|+|++|+++ .+|.
T Consensus 237 ~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~ 312 (390)
T 3o6n_A 237 NLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVER 312 (390)
T ss_dssp CCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGG
T ss_pred CCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCc
Confidence 99864 578999999999999999999999999999999999999999985 5777788999999999999999 5677
Q ss_pred ccccccce-eeecccCcccCCCCcCCCCCCCCCeEECCCCccccc
Q 041479 363 ALGSCHQL-WLDLSHNHLTGPIPLAVGNPKSIPHLDLSKNELSGE 406 (771)
Q Consensus 363 ~~~~l~~l-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 406 (771)
.+..++.| .|++++|+++.. | +..+++|+.|++++|+++..
T Consensus 313 ~~~~l~~L~~L~L~~N~i~~~-~--~~~~~~L~~L~l~~N~~~~~ 354 (390)
T 3o6n_A 313 NQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDCN 354 (390)
T ss_dssp GHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEHH
T ss_pred cccccCcCCEEECCCCcccee-C--chhhccCCEEEcCCCCccch
Confidence 78888889 899999999865 3 67789999999999999863
No 59
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=1.2e-35 Score=317.64 Aligned_cols=238 Identities=21% Similarity=0.322 Sum_probs=189.3
Q ss_pred ccccccccccccceEEEEEecCCC---eEEEEEEeecc-chhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQ---TFIAVKVLFLH-QRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFR 598 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~---~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 598 (771)
+.....+|+|.+|+||+|++..++ ..||||++... .....+.|.+|++++++++|||||++++++.+.+ ..
T Consensus 51 y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~ 125 (325)
T 3kul_A 51 IHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGR-----LA 125 (325)
T ss_dssp EEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGG-----CC
T ss_pred eEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC-----cc
Confidence 444567899999999999997544 46999999754 3445678999999999999999999999987765 67
Q ss_pred EEEEEeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccC
Q 041479 599 ALVYEFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIP 674 (771)
Q Consensus 599 ~lv~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~ 674 (771)
|+||||+++|+|.++ ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 126 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 202 (325)
T 3kul_A 126 MIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLE 202 (325)
T ss_dssp EEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCSSCEECC
T ss_pred EEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCCcccccc
Confidence 999999999999776 24689999999999999999999996 99999999999999999999999999998765
Q ss_pred cccCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhhhc
Q 041479 675 EVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQVL 738 (771)
Q Consensus 675 ~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 738 (771)
..... ........+|+.|+||| +||++|||++ |+.||.+... ...............+..+
T Consensus 203 ~~~~~-~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~ 279 (325)
T 3kul_A 203 DDPDA-AYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN--RDVISSVEEGYRLPAPMGC 279 (325)
T ss_dssp ----C-CEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCH--HHHHHHHHTTCCCCCCTTC
T ss_pred cCccc-eeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCH--HHHHHHHHcCCCCCCCCCc
Confidence 43221 12233445788999999 6999999999 9999976422 2233333333333444556
Q ss_pred CccccccCcccChhchhhcCCHHHHHHHHHHhC
Q 041479 739 DPLFLVGGVQEGEETAEENIKKGQIRESLIAIL 771 (771)
Q Consensus 739 ~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~l 771 (771)
++.+...+.+||..||++|||+.++++.|++++
T Consensus 280 ~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~ 312 (325)
T 3kul_A 280 PHALHQLMLDCWHKDRAQRPRFSQIVSVLDALI 312 (325)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 666667777999999999999999999999863
No 60
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=8.1e-36 Score=325.77 Aligned_cols=237 Identities=24% Similarity=0.295 Sum_probs=191.4
Q ss_pred cccccccccccccceEEEEEecCCCeEEEEEEeeccc-hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEE
Q 041479 522 DLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRAL 600 (771)
Q Consensus 522 ~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~l 600 (771)
.+.....+|+|.+|+||+|+++.+++.||||++.... ....++|.+|++++++++|||||++++++...+ ..|+
T Consensus 115 ~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~-----~~~l 189 (377)
T 3cbl_A 115 DLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQ-----PIYI 189 (377)
T ss_dssp GEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSS-----SCEE
T ss_pred HeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCC-----CcEE
Confidence 3444567899999999999999888899999986542 334567999999999999999999999997765 5799
Q ss_pred EEEeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcc
Q 041479 601 VYEFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676 (771)
Q Consensus 601 v~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~ 676 (771)
|||||++|+|.++ ...+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 190 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~ 266 (377)
T 3cbl_A 190 VMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFGMSREEADG 266 (377)
T ss_dssp EEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECTTS
T ss_pred EEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCCCceecCCC
Confidence 9999999999776 34589999999999999999999996 8999999999999999999999999999864332
Q ss_pred cCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhhhcCc
Q 041479 677 MSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQVLDP 740 (771)
Q Consensus 677 ~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 740 (771)
.. ........+++.|+||| |||++||++| |+.||.+... ....+.+....+...+..+++
T Consensus 267 ~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 342 (377)
T 3cbl_A 267 VY--AASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSN--QQTREFVEKGGRLPCPELCPD 342 (377)
T ss_dssp EE--ECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCH--HHHHHHHHTTCCCCCCTTCCH
T ss_pred ce--eecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHHcCCCCCCCCCCCH
Confidence 11 11111223678899999 7999999999 9999976422 224444444444444555666
Q ss_pred cccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 741 LFLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 741 ~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
.+...+.+||+.||++|||+.++++.|+++
T Consensus 343 ~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 372 (377)
T 3cbl_A 343 AVFRLMEQCWAYEPGQRPSFSTIYQELQSI 372 (377)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCchhCcCHHHHHHHHHHH
Confidence 666777899999999999999999999876
No 61
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=7.3e-35 Score=325.53 Aligned_cols=308 Identities=19% Similarity=0.220 Sum_probs=189.8
Q ss_pred CcccCCccccCCCCCcEEEcCCCcccccCCccccCCCCCCEEecccCcCcccCCcccccCCcccccCCccccCCCCCCEE
Q 041479 56 LTGTASPYIGNLTFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNALQGQIPDSRLILNKLEGNIPSELGSLLKFKGL 135 (771)
Q Consensus 56 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~l~~n~l~~~~p~~~~~l~~L~~L 135 (771)
..+..+..++.+++|++|+|++|.|++ +| +|+.+++|++|+|++|++++ +| ++.+++|++|
T Consensus 30 ~~~~~~~~~~~l~~L~~L~Ls~n~l~~-~~-~l~~l~~L~~L~Ls~n~l~~---------------~~--~~~l~~L~~L 90 (457)
T 3bz5_A 30 MQATDTISEEQLATLTSLDCHNSSITD-MT-GIEKLTGLTKLICTSNNITT---------------LD--LSQNTNLTYL 90 (457)
T ss_dssp CCTTSEEEHHHHTTCCEEECCSSCCCC-CT-TGGGCTTCSEEECCSSCCSC---------------CC--CTTCTTCSEE
T ss_pred cCcccccChhHcCCCCEEEccCCCccc-Ch-hhcccCCCCEEEccCCcCCe---------------Ec--cccCCCCCEE
Confidence 344556678999999999999999997 46 79999999999999999762 33 8889999999
Q ss_pred ecccccCcCCCCccceeeecccccccccCccccCCCCCCEEecccCcCcccCChhhhhCCCCCcEEEeecCcccccCCcc
Q 041479 136 GLANNYFTGPIPHLNMFQVSVYSLTGSIPIQLLNITSMEYFHVSENQLVGELPPHIGFTLPNVRILLLAGNQFFGNIPHS 215 (771)
Q Consensus 136 ~Ls~N~l~~~lp~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~ 215 (771)
++++|+|++ +| +.++++|++|++++|+++ .+| +. .+++|++|++++|+|++. +
T Consensus 91 ~Ls~N~l~~------------------~~--~~~l~~L~~L~L~~N~l~-~l~--~~-~l~~L~~L~l~~N~l~~l-~-- 143 (457)
T 3bz5_A 91 ACDSNKLTN------------------LD--VTPLTKLTYLNCDTNKLT-KLD--VS-QNPLLTYLNCARNTLTEI-D-- 143 (457)
T ss_dssp ECCSSCCSC------------------CC--CTTCTTCCEEECCSSCCS-CCC--CT-TCTTCCEEECTTSCCSCC-C--
T ss_pred ECcCCCCce------------------ee--cCCCCcCCEEECCCCcCC-eec--CC-CCCcCCEEECCCCcccee-c--
Confidence 999999984 11 444555555555555555 233 22 455555555555555542 1
Q ss_pred ccCCCCCCEEEccccccCCCCCcCcccccCCCCCcEEEccCccccccCChhhhhcccccceeecccCcCcccCccccccc
Q 041479 216 ISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSLSGTLPNSLANFSSHLRYLYMSANPISGSIPTEIGNL 295 (771)
Q Consensus 216 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l 295 (771)
+..+++|++|++++|+..+.++ +..+++|+.|++++|++++ +| +..+. +|+.|++++|++++. .++.+
T Consensus 144 l~~l~~L~~L~l~~n~~~~~~~-----~~~l~~L~~L~ls~n~l~~-l~--l~~l~-~L~~L~l~~N~l~~~---~l~~l 211 (457)
T 3bz5_A 144 VSHNTQLTELDCHLNKKITKLD-----VTPQTQLTTLDCSFNKITE-LD--VSQNK-LLNRLNCDTNNITKL---DLNQN 211 (457)
T ss_dssp CTTCTTCCEEECTTCSCCCCCC-----CTTCTTCCEEECCSSCCCC-CC--CTTCT-TCCEEECCSSCCSCC---CCTTC
T ss_pred cccCCcCCEEECCCCCcccccc-----cccCCcCCEEECCCCccce-ec--cccCC-CCCEEECcCCcCCee---ccccC
Confidence 4455555555555553322221 2444555555555555552 33 33332 455555555555532 24555
Q ss_pred CCcceEecCCccceeccCccccCCCCCCEEEccCCcccccCCccccccc-------ccccccccCccceecCCccccccc
Q 041479 296 KNLIIIAIEKFILIRNIPISVGYLLKLQVLSLFENNISREIPSSLGNFT-------FLTELNLCGNSIRGSVPSALGSCH 368 (771)
Q Consensus 296 ~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-------~L~~L~Ls~N~l~~~~p~~~~~l~ 368 (771)
++|+.|++++|.+.+ +| +..+++|+.|++++|++++..+..+..++ +|+.|++++|.+.+.+| ++.++
T Consensus 212 ~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~~~l~~L~~L~l~~n~L~~L~l~~n~~~~~~~--~~~l~ 286 (457)
T 3bz5_A 212 IQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQ--AEGCR 286 (457)
T ss_dssp TTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEE--CTTCT
T ss_pred CCCCEEECcCCcccc-cC--ccccCCCCEEEeeCCcCCCcCHHHCCCCCEEeccCCCCCEEECCCCccCCccc--ccccc
Confidence 555555555555544 33 44555555555555555544333333333 34555555655554444 34455
Q ss_pred ce-eeecccCcccCCCCc--------CCCCCCCCCeEECCCCcccccCCcchhhhhcccccccEEECcCCCCCC
Q 041479 369 QL-WLDLSHNHLTGPIPL--------AVGNPKSIPHLDLSKNELSGEIPSSLAWIFGYISIFAKLNLSYNNLDG 433 (771)
Q Consensus 369 ~l-~L~Ls~N~l~~~~p~--------~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~l~~L~~L~Ls~N~l~~ 433 (771)
.| .|++++|.+.+.+|. .++.+++|++|++++|+|++. | + +.+++|+.|++++|+|++
T Consensus 287 ~L~~L~Ls~n~~l~~l~~~~~~L~~L~l~~~~~L~~L~L~~N~l~~l-~--l----~~l~~L~~L~l~~N~l~~ 353 (457)
T 3bz5_A 287 KIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLNNTELTEL-D--V----SHNTKLKSLSCVNAHIQD 353 (457)
T ss_dssp TCCCCCCTTCTTCCEEECTTCCCSCCCCTTCTTCCEEECTTCCCSCC-C--C----TTCTTCSEEECCSSCCCB
T ss_pred cCCEEECCCCcccceeccCCCcceEechhhcccCCEEECCCCccccc-c--c----ccCCcCcEEECCCCCCCC
Confidence 55 566666655444432 255668999999999999973 3 3 388999999999999997
No 62
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=1.6e-35 Score=316.39 Aligned_cols=233 Identities=19% Similarity=0.203 Sum_probs=188.7
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccc-hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALV 601 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv 601 (771)
+.....+|+|.+|+||+|+++.+++.||||++.... ....+.+.+|+.+++.++|||||++++++.+.+ ..|+|
T Consensus 9 y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~-----~~~lv 83 (323)
T 3tki_A 9 WDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGN-----IQYLF 83 (323)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSS-----EEEEE
T ss_pred ceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCC-----eEEEE
Confidence 444567899999999999999899999999996553 233467899999999999999999999998776 78999
Q ss_pred EEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccC
Q 041479 602 YEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMS 678 (771)
Q Consensus 602 ~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 678 (771)
|||+++|+|.++ ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 84 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 160 (323)
T 3tki_A 84 LEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR 160 (323)
T ss_dssp EECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTE
T ss_pred EEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEeeccceeccCCc
Confidence 999999999877 33689999999999999999999985 999999999999999999999999999986543221
Q ss_pred Ccccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCccc
Q 041479 679 SNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLF 742 (771)
Q Consensus 679 ~~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 742 (771)
.......+||+.|+||| +||++|||++|+.||.+..........+............+++.+
T Consensus 161 --~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (323)
T 3tki_A 161 --ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAP 238 (323)
T ss_dssp --ECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTTSTTGGGSCHHH
T ss_pred --ccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccccCCccccCCHHH
Confidence 11223457999999999 699999999999999765444444555554444433345566666
Q ss_pred cccCcccChhchhhcCCHHHHHH
Q 041479 743 LVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 743 ~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
.....+||+.||++|||+.|+++
T Consensus 239 ~~li~~~L~~dP~~R~t~~eil~ 261 (323)
T 3tki_A 239 LALLHKILVENPSARITIPDIKK 261 (323)
T ss_dssp HHHHHHHSCSSTTTSCCHHHHTT
T ss_pred HHHHHHHccCChhhCcCHHHHhh
Confidence 66777999999999999999975
No 63
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=2e-35 Score=315.79 Aligned_cols=229 Identities=22% Similarity=0.203 Sum_probs=186.4
Q ss_pred ccccccccccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeE
Q 041479 521 KDLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFR 598 (771)
Q Consensus 521 ~~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 598 (771)
..+.....+|+|.+|+||+|++..+++.||||++.... ....+++.+|+++++.++||||+++++++.+.+ ..
T Consensus 15 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~-----~~ 89 (328)
T 3fe3_A 15 GNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEK-----TL 89 (328)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS-----EE
T ss_pred CCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC-----EE
Confidence 34455667899999999999999899999999996553 345678999999999999999999999998776 78
Q ss_pred EEEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCc
Q 041479 599 ALVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPE 675 (771)
Q Consensus 599 ~lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~ 675 (771)
|+||||+++|+|.++ ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 90 ~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 166 (328)
T 3fe3_A 90 YLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFGFSNEFTV 166 (328)
T ss_dssp EEEECCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTTCCGGGSS
T ss_pred EEEEECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeeccCceecCC
Confidence 999999999999776 35689999999999999999999996 999999999999999999999999999986543
Q ss_pred ccCCcccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcC
Q 041479 676 VMSSNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLD 739 (771)
Q Consensus 676 ~~~~~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 739 (771)
.. .....+||+.|+||| +||++|||++|+.||.+... ..+.+..... ....+..++
T Consensus 167 ~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~--~~~~~~i~~~-~~~~p~~~s 238 (328)
T 3fe3_A 167 GG-----KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNL--KELRERVLRG-KYRIPFYMS 238 (328)
T ss_dssp SC-----GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHC-CCCCCTTSC
T ss_pred CC-----ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCH--HHHHHHHHhC-CCCCCCCCC
Confidence 22 123457999999999 69999999999999975321 1122222111 122333455
Q ss_pred ccccccCcccChhchhhcCCHHHHHH
Q 041479 740 PLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 740 ~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
+.+.....+||+.||++|||+.|+++
T Consensus 239 ~~~~~li~~~L~~dP~~R~t~~eil~ 264 (328)
T 3fe3_A 239 TDCENLLKRFLVLNPIKRGTLEQIMK 264 (328)
T ss_dssp HHHHHHHHHHCCSSTTTSCCHHHHTT
T ss_pred HHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 66666677999999999999999975
No 64
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=100.00 E-value=1.1e-35 Score=317.84 Aligned_cols=275 Identities=17% Similarity=0.223 Sum_probs=213.0
Q ss_pred CccHHHHHHHHhcCCCCCCCCCCCC----CCCCCCccceeeeec--------CCCCcEEEEEcCCCCCcccCCccccCCC
Q 041479 1 EPDKQALLAFKSKVDDDPFGALSTW----NDSVNFCQWLGVTCS--------LKYQRVILLNLSGQNLTGTASPYIGNLT 68 (771)
Q Consensus 1 ~~~~~~l~~~~~~~~~~~~~~~~~w----~~~~~~c~w~~v~c~--------~~~~~l~~L~Ls~n~l~~~~~~~~~~l~ 68 (771)
++|++||++||+.+..|+.+.+++| ....++|.|.|+.|. ....+|+.|+|++|+++ .+|+.++.++
T Consensus 26 ~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l~~l~ 104 (328)
T 4fcg_A 26 RPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQAFRLS 104 (328)
T ss_dssp CCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSCGGGGT
T ss_pred chHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChhhhhCC
Confidence 4689999999998877777777899 456789999999994 33478999999999999 7788899999
Q ss_pred CCcEEEcCCCcccccCCccccCCCCCCEEecccCcCcccCCcccccCCcccccCCccccCCCCCCEEecccccCcCCCCc
Q 041479 69 FLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNALQGQIPDSRLILNKLEGNIPSELGSLLKFKGLGLANNYFTGPIPH 148 (771)
Q Consensus 69 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~ 148 (771)
+|++|+|++|.|+ .+|..|+++++|++|+|++|+++ .+|..|+++++|+.|+|++|++.+.+|.
T Consensus 105 ~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~---------------~lp~~l~~l~~L~~L~L~~n~~~~~~p~ 168 (328)
T 4fcg_A 105 HLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR---------------ALPASIASLNRLRELSIRACPELTELPE 168 (328)
T ss_dssp TCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC---------------CCCGGGGGCTTCCEEEEEEETTCCCCCS
T ss_pred CCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc---------------cCcHHHhcCcCCCEEECCCCCCccccCh
Confidence 9999999999999 68999999999999999999975 6788899999999999999887765553
Q ss_pred -cceeeecccccccccCccccCCCCCCEEecccCcCcccCChhhhhCCCCCcEEEeecCcccccCCccccCCCCCCEEEc
Q 041479 149 -LNMFQVSVYSLTGSIPIQLLNITSMEYFHVSENQLVGELPPHIGFTLPNVRILLLAGNQFFGNIPHSISNASKLEWLDF 227 (771)
Q Consensus 149 -L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 227 (771)
+... ..+..+.++++|++|++++|+++ .+|..+. .+++|++|+|++|++++ +|..|..+++|++|+|
T Consensus 169 ~~~~~---------~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~-~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~L 236 (328)
T 4fcg_A 169 PLAST---------DASGEHQGLVNLQSLRLEWTGIR-SLPASIA-NLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDL 236 (328)
T ss_dssp CSEEE---------C-CCCEEESTTCCEEEEEEECCC-CCCGGGG-GCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEEC
T ss_pred hHhhc---------cchhhhccCCCCCEEECcCCCcC-cchHhhc-CCCCCCEEEccCCCCCc-CchhhccCCCCCEEEC
Confidence 1111 12234556788888888888887 7777765 77788888888888874 5556777788888888
Q ss_pred cccccCCCCCcCcccccCCCCCcEEEccCccccccCChhhhhcccccceeecccCcCcccCcccccccCCcceEecCCcc
Q 041479 228 ANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSLSGTLPNSLANFSSHLRYLYMSANPISGSIPTEIGNLKNLIIIAIEKFI 307 (771)
Q Consensus 228 s~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~ 307 (771)
++|.+.+.+|..| .++++|++|+|++|.+.+.+|..+..+. +|++|++++|++.+.+|..++++++|+.+++..+.
T Consensus 237 s~n~~~~~~p~~~---~~l~~L~~L~L~~n~~~~~~p~~~~~l~-~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~ 312 (328)
T 4fcg_A 237 RGCTALRNYPPIF---GGRAPLKRLILKDCSNLLTLPLDIHRLT-QLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHL 312 (328)
T ss_dssp TTCTTCCBCCCCT---TCCCCCCEEECTTCTTCCBCCTTGGGCT-TCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGG
T ss_pred cCCcchhhhHHHh---cCCCCCCEEECCCCCchhhcchhhhcCC-CCCEEeCCCCCchhhccHHHhhccCceEEeCCHHH
Confidence 8877777777655 5667777777777777777777776665 67777777777777777777766666666665543
Q ss_pred c
Q 041479 308 L 308 (771)
Q Consensus 308 l 308 (771)
+
T Consensus 313 ~ 313 (328)
T 4fcg_A 313 Q 313 (328)
T ss_dssp S
T ss_pred H
Confidence 3
No 65
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=9.5e-35 Score=310.28 Aligned_cols=239 Identities=28% Similarity=0.429 Sum_probs=188.2
Q ss_pred cccccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEE
Q 041479 522 DLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALV 601 (771)
Q Consensus 522 ~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv 601 (771)
.+.....+|+|.+|+||+|+++. ++.||||++........+.+.+|++++++++||||+++++++.+.+ ..++|
T Consensus 40 ~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~~lv 113 (321)
T 2qkw_B 40 NFDHKFLIGHGVFGKVYKGVLRD-GAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERN-----EMILI 113 (321)
T ss_dssp CCSCCCCSCBCSSSEEEEEECTT-CCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTT-----CCEEE
T ss_pred ccCccceeecCCCeeEEEEEECC-CCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC-----eEEEE
Confidence 34455668999999999999764 5699999997766666788999999999999999999999987766 67999
Q ss_pred EEeccCCCCCCCc-------ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccC
Q 041479 602 YEFMHHGSLESCP-------RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIP 674 (771)
Q Consensus 602 ~e~~~~g~L~~~~-------~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~ 674 (771)
|||+++|+|.++. ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 114 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 190 (321)
T 2qkw_B 114 YKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISKKGT 190 (321)
T ss_dssp EECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCCTTCEECS
T ss_pred EEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeecccccccc
Confidence 9999999998762 2488999999999999999999995 99999999999999999999999999998654
Q ss_pred cccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccC-CccHHHHHHhhCC-Cchhhh
Q 041479 675 EVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTE-GLDLHNFVKMALP-DQILQV 737 (771)
Q Consensus 675 ~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~-~~~~~~~~~~~~~-~~~~~~ 737 (771)
.... ........||+.|+||| +||++|||++|+.||.+.... .....+|...... ......
T Consensus 191 ~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (321)
T 2qkw_B 191 ELDQ--THLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQI 268 (321)
T ss_dssp SSSC--CCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSS
T ss_pred cccc--cccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHh
Confidence 3221 11223456899999999 699999999999999754332 2334444322211 112222
Q ss_pred cCc------------cccccCcccChhchhhcCCHHHHHHHHHHhC
Q 041479 738 LDP------------LFLVGGVQEGEETAEENIKKGQIRESLIAIL 771 (771)
Q Consensus 738 ~~~------------~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~l 771 (771)
+++ .+.....+||+.||++|||+.|+++.|++++
T Consensus 269 ~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l 314 (321)
T 2qkw_B 269 VDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYAL 314 (321)
T ss_dssp SSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHh
Confidence 222 2223445999999999999999999999763
No 66
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=1.7e-35 Score=314.02 Aligned_cols=235 Identities=26% Similarity=0.346 Sum_probs=181.1
Q ss_pred ccccccccccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeE
Q 041479 521 KDLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFR 598 (771)
Q Consensus 521 ~~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 598 (771)
.++.....+|+|.+|+||+|++ .++.||||++.... ....+++.+|++++++++|||||++++++.+.+ ..
T Consensus 37 ~~y~i~~~lG~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-----~~ 109 (309)
T 3p86_A 37 CDLNIKEKIGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPP-----NL 109 (309)
T ss_dssp GGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTT-----CC
T ss_pred hHceeeeEeecCCCeEEEEEEE--CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC-----ce
Confidence 3444556789999999999987 46689999996543 344578999999999999999999999998766 67
Q ss_pred EEEEEeccCCCCCCCc------ccCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEecCCCCCCeeeCCCCceEEecccCc
Q 041479 599 ALVYEFMHHGSLESCP------RILSFLRRLNIAIDVASALEYLHHHCKKP--IVHCDLKPSNVLLDNDMTAHMGDFGLT 670 (771)
Q Consensus 599 ~lv~e~~~~g~L~~~~------~~l~~~~~~~i~~~ia~gL~~LH~~~~~~--ivHrdlk~~NILl~~~~~~kl~DfGla 670 (771)
++||||+++|+|.++. ..+++..+..++.|++.||+|||+. + |+||||||+||+++.++.+||+|||++
T Consensus 110 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a 186 (309)
T 3p86_A 110 SIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDFGLS 186 (309)
T ss_dssp EEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCCC--
T ss_pred EEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCCCCC
Confidence 9999999999997762 2388999999999999999999986 6 999999999999999999999999999
Q ss_pred cccCcccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHH-HhhCCCch
Q 041479 671 RFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFV-KMALPDQI 734 (771)
Q Consensus 671 ~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~-~~~~~~~~ 734 (771)
+...... .......||+.|+||| +||++|||++|+.||.+.... ...... ........
T Consensus 187 ~~~~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~--~~~~~~~~~~~~~~~ 260 (309)
T 3p86_A 187 RLKASTF----LSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPA--QVVAAVGFKCKRLEI 260 (309)
T ss_dssp -------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHH--HHHHHHHHSCCCCCC
T ss_pred ccccccc----cccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhcCCCCCC
Confidence 8543322 1223456999999999 699999999999999764221 122222 22223445
Q ss_pred hhhcCccccccCcccChhchhhcCCHHHHHHHHHHhC
Q 041479 735 LQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAIL 771 (771)
Q Consensus 735 ~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~l 771 (771)
+..+++.+.....+||+.||++|||+.++++.|++++
T Consensus 261 ~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~ 297 (309)
T 3p86_A 261 PRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLI 297 (309)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 5666777777788999999999999999999998763
No 67
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.3e-35 Score=317.29 Aligned_cols=229 Identities=23% Similarity=0.245 Sum_probs=178.6
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccc-hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALV 601 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv 601 (771)
+.....+|+|.+|+||+|++..+++.||||++.... ....+.+.+|++++++++|||||++++++.+.+ ..|+|
T Consensus 12 y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~-----~~~lv 86 (347)
T 3zgw_A 12 YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETAN-----KIFMV 86 (347)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSS-----EEEEE
T ss_pred eEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCC-----EEEEE
Confidence 344567899999999999999999999999996543 233467899999999999999999999998776 78999
Q ss_pred EEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccC
Q 041479 602 YEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMS 678 (771)
Q Consensus 602 ~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 678 (771)
||||++|+|.++ ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++........
T Consensus 87 ~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~ 163 (347)
T 3zgw_A 87 LEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKD 163 (347)
T ss_dssp EECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBC------
T ss_pred EeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEeccCcccccCCCC
Confidence 999999999776 45689999999999999999999996 999999999999999999999999999976543221
Q ss_pred Ccccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCccc
Q 041479 679 SNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLF 742 (771)
Q Consensus 679 ~~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 742 (771)
......+||+.|+||| +||++|||++|+.||.+.... .....+.... ...+..+++.+
T Consensus 164 ---~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~-~~~~~i~~~~--~~~p~~~s~~~ 237 (347)
T 3zgw_A 164 ---YHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVM-ALYKKIMRGK--YDVPKWLSPSS 237 (347)
T ss_dssp -----------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHTC--CCCCTTCCHHH
T ss_pred ---ccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHH-HHHHHHHcCC--CCCCCCCCHHH
Confidence 1223457999999999 699999999999999753211 1122222222 22334456666
Q ss_pred cccCcccChhchhhcCCHHHHHH
Q 041479 743 LVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 743 ~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
.....+||+.||++|||+.|+++
T Consensus 238 ~~li~~~L~~dP~~Rps~~eil~ 260 (347)
T 3zgw_A 238 ILLLQQMLQVDPKKRISMKNLLN 260 (347)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HHHHHHHcccCHhHCcCHHHHhc
Confidence 66677999999999999999985
No 68
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=3.8e-35 Score=313.17 Aligned_cols=225 Identities=20% Similarity=0.263 Sum_probs=185.6
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEecc
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMH 606 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~~~ 606 (771)
..+|+|.+|+||+|+++.+++.||||++........+.+.+|+.++++++|||||++++++...+ ..++||||++
T Consensus 51 ~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-----~~~lv~e~~~ 125 (321)
T 2c30_A 51 VKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGE-----ELWVLMEFLQ 125 (321)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETT-----EEEEEECCCC
T ss_pred EEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEEEECC-----EEEEEEecCC
Confidence 36899999999999999888899999998766666788999999999999999999999998876 7899999999
Q ss_pred CCCCCCC--cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCccccc
Q 041479 607 HGSLESC--PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSS 684 (771)
Q Consensus 607 ~g~L~~~--~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~ 684 (771)
+|+|.++ ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....... ..
T Consensus 126 ~~~L~~~l~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~----~~ 198 (321)
T 2c30_A 126 GGALTDIVSQVRLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP----KR 198 (321)
T ss_dssp SCBHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC----CB
T ss_pred CCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCcEEEeeeeeeeecccCcc----cc
Confidence 9999776 34689999999999999999999995 999999999999999999999999999986544321 12
Q ss_pred ccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCC--chhhhcCccccccCc
Q 041479 685 VGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPD--QILQVLDPLFLVGGV 747 (771)
Q Consensus 685 ~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 747 (771)
....||+.|+||| +||++|||++|+.||.+... ...........+. .....+++.+.....
T Consensus 199 ~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 276 (321)
T 2c30_A 199 KSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSP--VQAMKRLRDSPPPKLKNSHKVSPVLRDFLE 276 (321)
T ss_dssp CCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHHHHHHHSSCCCCTTGGGSCHHHHHHHH
T ss_pred ccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHhcCCCCCcCccccCCHHHHHHHH
Confidence 3457999999999 69999999999999965321 1222222222222 223345556666777
Q ss_pred ccChhchhhcCCHHHHHH
Q 041479 748 QEGEETAEENIKKGQIRE 765 (771)
Q Consensus 748 ~cl~~~p~~Rpt~~~vl~ 765 (771)
+||+.||++|||+.|+++
T Consensus 277 ~~l~~dp~~Rps~~ell~ 294 (321)
T 2c30_A 277 RMLVRDPQERATAQELLD 294 (321)
T ss_dssp HHSCSSTTTSCCHHHHHT
T ss_pred HHccCChhhCcCHHHHhc
Confidence 999999999999999985
No 69
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=5.4e-35 Score=330.38 Aligned_cols=236 Identities=22% Similarity=0.323 Sum_probs=195.8
Q ss_pred cccccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEE
Q 041479 522 DLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALV 601 (771)
Q Consensus 522 ~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv 601 (771)
++.....+|+|.+|+||+|+++.+++.||||++.... ...++|.+|++++++++|||||+++++|.+.+ ..|+|
T Consensus 221 ~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~-----~~~lv 294 (495)
T 1opk_A 221 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP-----PFYII 294 (495)
T ss_dssp GEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-----SCEEE
T ss_pred HceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCC-----cEEEE
Confidence 3445567999999999999999888899999996543 34678999999999999999999999998766 57999
Q ss_pred EEeccCCCCCCC-----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcc
Q 041479 602 YEFMHHGSLESC-----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676 (771)
Q Consensus 602 ~e~~~~g~L~~~-----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~ 676 (771)
||||++|+|.++ ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 295 ~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 371 (495)
T 1opk_A 295 TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGD 371 (495)
T ss_dssp EECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTTCEECCTTC
T ss_pred EEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecccceeccCC
Confidence 999999999776 23588999999999999999999996 8999999999999999999999999999876432
Q ss_pred cCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhhhcCc
Q 041479 677 MSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQVLDP 740 (771)
Q Consensus 677 ~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 740 (771)
. .....+..+++.|+||| |||++|||++ |+.||.+... ..+.+.+....+...+..+++
T Consensus 372 ~---~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 446 (495)
T 1opk_A 372 T---YTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL--SQVYELLEKDYRMERPEGCPE 446 (495)
T ss_dssp C---EECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCG--GGHHHHHHTTCCCCCCTTCCH
T ss_pred c---eeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCCCH--HHHHHHHHcCCCCCCCCCCCH
Confidence 2 12223445788999999 7999999999 9999976432 235555555555445556666
Q ss_pred cccccCcccChhchhhcCCHHHHHHHHHHhC
Q 041479 741 LFLVGGVQEGEETAEENIKKGQIRESLIAIL 771 (771)
Q Consensus 741 ~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~l 771 (771)
.+..++.+||+.||++|||+.++++.|++++
T Consensus 447 ~l~~li~~cl~~dP~~RPs~~el~~~L~~~~ 477 (495)
T 1opk_A 447 KVYELMRACWQWNPSDRPSFAEIHQAFETMF 477 (495)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHTSC
T ss_pred HHHHHHHHHcCcChhHCcCHHHHHHHHHHHH
Confidence 7777778999999999999999999998763
No 70
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=1.1e-33 Score=315.83 Aligned_cols=325 Identities=25% Similarity=0.343 Sum_probs=149.5
Q ss_pred cEEEEEcCCCCCcccCCccccCCCCCcEEEcCCCcccccCCccccCCCCCCEEecccCcCccc--CC----cccccCCcc
Q 041479 45 RVILLNLSGQNLTGTASPYIGNLTFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNALQGQ--IP----DSRLILNKL 118 (771)
Q Consensus 45 ~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~--~p----~~~l~~n~l 118 (771)
+++.|++++|++++.+ . ..++|++|++++|++++ +|.. +++|++|++++|++++. +| ...+..|++
T Consensus 72 ~l~~L~l~~~~l~~lp-~---~~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~l~~~~~~L~~L~L~~n~l 143 (454)
T 1jl5_A 72 QAHELELNNLGLSSLP-E---LPPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKALSDLPPLLEYLGVSNNQL 143 (454)
T ss_dssp TCSEEECTTSCCSCCC-S---CCTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSCCCSCCTTCCEEECCSSCC
T ss_pred CCCEEEecCCccccCC-C---CcCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCcccCCCCCCCEEECcCCCC
Confidence 4577777777777532 2 13677777777777776 5543 36777777777777641 11 112333444
Q ss_pred cccCCccccCCCCCCEEecccccCcCCCCccceeeecccccccccCccccCCCCCCEEecccCcCcccCChhhhhCCCCC
Q 041479 119 EGNIPSELGSLLKFKGLGLANNYFTGPIPHLNMFQVSVYSLTGSIPIQLLNITSMEYFHVSENQLVGELPPHIGFTLPNV 198 (771)
Q Consensus 119 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L 198 (771)
++ +| .|+++++|++|++++|+++ + +|.. ..+|++|++++|+++ .+| .+. .+++|
T Consensus 144 ~~-lp-~~~~l~~L~~L~l~~N~l~-----------------~-lp~~---~~~L~~L~L~~n~l~-~l~-~~~-~l~~L 197 (454)
T 1jl5_A 144 EK-LP-ELQNSSFLKIIDVDNNSLK-----------------K-LPDL---PPSLEFIAAGNNQLE-ELP-ELQ-NLPFL 197 (454)
T ss_dssp SS-CC-CCTTCTTCCEEECCSSCCS-----------------C-CCCC---CTTCCEEECCSSCCS-SCC-CCT-TCTTC
T ss_pred CC-Cc-ccCCCCCCCEEECCCCcCc-----------------c-cCCC---cccccEEECcCCcCC-cCc-ccc-CCCCC
Confidence 43 33 3445555555555555444 3 3322 135555555555555 244 222 55555
Q ss_pred cEEEeecCcccccCCccccCCCCCCEEEccccccCCCCCcCcccccCCCCCcEEEccCccccccCChhhhhcccccceee
Q 041479 199 RILLLAGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSLSGTLPNSLANFSSHLRYLY 278 (771)
Q Consensus 199 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~ 278 (771)
+.|++++|++++ +|... ++|++|++++|+++. +|. + ..+++|++|++++|+++ .+|..+ ++|++|+
T Consensus 198 ~~L~l~~N~l~~-l~~~~---~~L~~L~l~~n~l~~-lp~-~---~~l~~L~~L~l~~N~l~-~l~~~~----~~L~~L~ 263 (454)
T 1jl5_A 198 TAIYADNNSLKK-LPDLP---LSLESIVAGNNILEE-LPE-L---QNLPFLTTIYADNNLLK-TLPDLP----PSLEALN 263 (454)
T ss_dssp CEEECCSSCCSS-CCCCC---TTCCEEECCSSCCSS-CCC-C---TTCTTCCEEECCSSCCS-SCCSCC----TTCCEEE
T ss_pred CEEECCCCcCCc-CCCCc---CcccEEECcCCcCCc-ccc-c---CCCCCCCEEECCCCcCC-cccccc----cccCEEE
Confidence 555555555553 22221 355555555555552 231 2 44555555555555555 233321 2455555
Q ss_pred cccCcCcccCcccccccCCcceEecCCccceeccCccccCCCCCCEEEccCCcccccCCcccccc-cccccccccCccce
Q 041479 279 MSANPISGSIPTEIGNLKNLIIIAIEKFILIRNIPISVGYLLKLQVLSLFENNISREIPSSLGNF-TFLTELNLCGNSIR 357 (771)
Q Consensus 279 Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~Ls~N~l~ 357 (771)
+++|++++ +|.. .++|+.|++++|.+.+. |. ..++|+.|++++|++++ ++ .+ ++|++|++++|+++
T Consensus 264 l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l-~~---~~~~L~~L~l~~N~l~~-i~----~~~~~L~~L~Ls~N~l~ 330 (454)
T 1jl5_A 264 VRDNYLTD-LPEL---PQSLTFLDVSENIFSGL-SE---LPPNLYYLNASSNEIRS-LC----DLPPSLEELNVSNNKLI 330 (454)
T ss_dssp CCSSCCSC-CCCC---CTTCCEEECCSSCCSEE-SC---CCTTCCEEECCSSCCSE-EC----CCCTTCCEEECCSSCCS
T ss_pred CCCCcccc-cCcc---cCcCCEEECcCCccCcc-cC---cCCcCCEEECcCCcCCc-cc----CCcCcCCEEECCCCccc
Confidence 55555553 3332 24555555555555431 11 01355555555555553 11 12 35555555555555
Q ss_pred ecCCcccccccce-eeecccCcccCCCCcCCCCCCCCCeEECCCCcccc--cCCcchhhh---------hcccccccEEE
Q 041479 358 GSVPSALGSCHQL-WLDLSHNHLTGPIPLAVGNPKSIPHLDLSKNELSG--EIPSSLAWI---------FGYISIFAKLN 425 (771)
Q Consensus 358 ~~~p~~~~~l~~l-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~l~~~---------~~~l~~L~~L~ 425 (771)
+ +|.. ++.| .|++++|++++ +|. .+++|++|++++|++++ .+|.++..+ ...+++|+.||
T Consensus 331 ~-lp~~---~~~L~~L~L~~N~l~~-lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~L~~n~~~~~i~~~~~~L~~L~ 402 (454)
T 1jl5_A 331 E-LPAL---PPRLERLIASFNHLAE-VPE---LPQNLKQLHVEYNPLREFPDIPESVEDLRMNSHLAEVPELPQNLKQLH 402 (454)
T ss_dssp C-CCCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSSCCCCCTTCCEEECCC----------------
T ss_pred c-cccc---CCcCCEEECCCCcccc-ccc---hhhhccEEECCCCCCCcCCCChHHHHhhhhcccccccccccCcCCEEE
Confidence 3 3332 2333 45555555553 333 24555556666555555 444443310 00127899999
Q ss_pred CcCCCCCC--CCCcc
Q 041479 426 LSYNNLDG--DVPRK 438 (771)
Q Consensus 426 Ls~N~l~~--~~p~~ 438 (771)
+++|++++ .+|..
T Consensus 403 ls~N~l~~~~~iP~s 417 (454)
T 1jl5_A 403 VETNPLREFPDIPES 417 (454)
T ss_dssp ---------------
T ss_pred CCCCcCCccccchhh
Confidence 99999987 66653
No 71
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=3.1e-35 Score=309.94 Aligned_cols=236 Identities=22% Similarity=0.349 Sum_probs=183.8
Q ss_pred cccccccccccceEEEEEecCCCeEEEEEEeecc---chhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEE
Q 041479 524 LLNVSYESLVKATVYKGILDLDQTFIAVKVLFLH---QRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRAL 600 (771)
Q Consensus 524 ~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~l 600 (771)
.....+|+|.+|+||+|++..+++.||||++... .....+.+.+|+.++++++||||+++++++.+.+ ..|+
T Consensus 14 ~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~-----~~~l 88 (294)
T 4eqm_A 14 KIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDD-----CYYL 88 (294)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSS-----EEEE
T ss_pred EEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCC-----eEEE
Confidence 3445689999999999999999999999998543 2345678999999999999999999999988776 7899
Q ss_pred EEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCccc
Q 041479 601 VYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVM 677 (771)
Q Consensus 601 v~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~ 677 (771)
||||+++|+|.++ ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 89 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 165 (294)
T 4eqm_A 89 VMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETS 165 (294)
T ss_dssp EEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCSSSTTC----
T ss_pred EEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCCCcccccccc
Confidence 9999999999876 34689999999999999999999986 89999999999999999999999999998664332
Q ss_pred CCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCC---chhhhcC
Q 041479 678 SSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPD---QILQVLD 739 (771)
Q Consensus 678 ~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 739 (771)
. .......||+.|+||| +|+++|||++|+.||.+...... .........+. .....++
T Consensus 166 ~---~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 241 (294)
T 4eqm_A 166 L---TQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSI-AIKHIQDSVPNVTTDVRKDIP 241 (294)
T ss_dssp ------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHH-HHHHHSSCCCCHHHHSCTTSC
T ss_pred c---cccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHhhccCCCcchhcccCCC
Confidence 1 1223356999999999 69999999999999975322111 11222222221 1223344
Q ss_pred ccccccCcccChhchhhcC-CHHHHHHHHHHhC
Q 041479 740 PLFLVGGVQEGEETAEENI-KKGQIRESLIAIL 771 (771)
Q Consensus 740 ~~~~~~~~~cl~~~p~~Rp-t~~~vl~~L~~~l 771 (771)
+.+.....+|+++||++|| ++.++.+.|++++
T Consensus 242 ~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~ 274 (294)
T 4eqm_A 242 QSLSNVILRATEKDKANRYKTIQEMKDDLSSVL 274 (294)
T ss_dssp HHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSS
T ss_pred HHHHHHHHHHhcCCHhHccccHHHHHHHHHHHH
Confidence 5555666799999999999 9999999998764
No 72
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=1.1e-34 Score=306.55 Aligned_cols=242 Identities=22% Similarity=0.274 Sum_probs=183.9
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhc--cCCCCceeEEEEeecCCCCCceeEEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRN--IRHRNLVKIITACSTSDFQGNYFRAL 600 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~--l~H~nIv~l~~~~~~~~~~~~~~~~l 600 (771)
+.....+|+|.+|+||+|++ +++.||||++... ..+.+.+|.+++.. ++||||+++++++.+.. ......++
T Consensus 10 y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~-~~~~~~~l 83 (301)
T 3q4u_A 10 ITLLECVGKGRYGEVWRGSW--QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASDMTSR-HSSTQLWL 83 (301)
T ss_dssp CEEEEEEEECSSEEEEEEEE--TTEEEEEEEECGG---GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEE-TTEEEEEE
T ss_pred EEEEEeeccCCCcEEEEEEE--CCEEEEEEEeccc---cchhhHHHHHHHHHhhccCcCeeeEEEeecccc-CCCceeEE
Confidence 44456789999999999988 4679999998644 33556667777766 78999999999976542 22236799
Q ss_pred EEEeccCCCCCCC--cccCCHHHHHHHHHHHHHHHHHHHhcC-----CCCeEecCCCCCCeeeCCCCceEEecccCcccc
Q 041479 601 VYEFMHHGSLESC--PRILSFLRRLNIAIDVASALEYLHHHC-----KKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673 (771)
Q Consensus 601 v~e~~~~g~L~~~--~~~l~~~~~~~i~~~ia~gL~~LH~~~-----~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~ 673 (771)
||||+++|+|.++ ...+++..+..++.|++.||+|||+.. +.+|+||||||+||+++.++.+||+|||+|+..
T Consensus 84 v~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~ 163 (301)
T 3q4u_A 84 ITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMH 163 (301)
T ss_dssp EECCCTTCBHHHHHTTCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEE
T ss_pred ehhhccCCCHHHHHhhcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCeeec
Confidence 9999999999876 446899999999999999999999210 249999999999999999999999999999765
Q ss_pred CcccCCcccccccccccccccchh---------------------HHHHHHHHHhC----------CCCCCccccCCccH
Q 041479 674 PEVMSSNQCSSVGLKGTVGYATPE---------------------YGILLLEIFTG----------KRPTSDMFTEGLDL 722 (771)
Q Consensus 674 ~~~~~~~~~~~~~~~gt~~y~aPE---------------------~Gv~l~el~tg----------~~P~~~~~~~~~~~ 722 (771)
...............||+.|+||| +||++|||++| +.||.+........
T Consensus 164 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~ 243 (301)
T 3q4u_A 164 SQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSF 243 (301)
T ss_dssp ETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCH
T ss_pred ccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCcch
Confidence 443322222233457999999999 59999999999 88887665554444
Q ss_pred HHHHHhhCC----Cch-----hhhcCccccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 723 HNFVKMALP----DQI-----LQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 723 ~~~~~~~~~----~~~-----~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
......... ... .....+.+.....+||+.||++|||+.++++.|+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 244 EDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300 (301)
T ss_dssp HHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred hhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHHHHhcc
Confidence 444332221 111 112233455567799999999999999999999976
No 73
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=3e-34 Score=309.96 Aligned_cols=302 Identities=25% Similarity=0.365 Sum_probs=164.4
Q ss_pred CcEEEEEcCCCCCcccCCccccCCCCCcEEEcCCCcccccCCccccCCCCCCEEecccCcCcccCCcccccCCcccccCC
Q 041479 44 QRVILLNLSGQNLTGTASPYIGNLTFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNALQGQIPDSRLILNKLEGNIP 123 (771)
Q Consensus 44 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~l~~n~l~~~~p 123 (771)
.+++.|++++|.++.. + .+..+++|++|+|++|++++ +|. |..+++|++|++++|.++ .+
T Consensus 44 ~~L~~L~l~~~~i~~~-~-~~~~~~~L~~L~l~~n~i~~-~~~-~~~l~~L~~L~L~~n~i~---------------~~- 103 (347)
T 4fmz_A 44 ESITKLVVAGEKVASI-Q-GIEYLTNLEYLNLNGNQITD-ISP-LSNLVKLTNLYIGTNKIT---------------DI- 103 (347)
T ss_dssp TTCSEEECCSSCCCCC-T-TGGGCTTCCEEECCSSCCCC-CGG-GTTCTTCCEEECCSSCCC---------------CC-
T ss_pred ccccEEEEeCCccccc-h-hhhhcCCccEEEccCCcccc-chh-hhcCCcCCEEEccCCccc---------------Cc-
Confidence 5666666666666633 2 36666666666666666664 333 666666666666666654 12
Q ss_pred ccccCCCCCCEEecccccCcCCCCccceeeecccccccccCccccCCCCCCEEecccCcCcccCChhhhhCCCCCcEEEe
Q 041479 124 SELGSLLKFKGLGLANNYFTGPIPHLNMFQVSVYSLTGSIPIQLLNITSMEYFHVSENQLVGELPPHIGFTLPNVRILLL 203 (771)
Q Consensus 124 ~~~~~l~~L~~L~Ls~N~l~~~lp~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L 203 (771)
..+.++++|++|++++|++++ ++. +..+++|++|++++|.....++. +. .+++|++|++
T Consensus 104 ~~~~~l~~L~~L~l~~n~i~~------------------~~~-~~~l~~L~~L~l~~n~~~~~~~~-~~-~l~~L~~L~l 162 (347)
T 4fmz_A 104 SALQNLTNLRELYLNEDNISD------------------ISP-LANLTKMYSLNLGANHNLSDLSP-LS-NMTGLNYLTV 162 (347)
T ss_dssp GGGTTCTTCSEEECTTSCCCC------------------CGG-GTTCTTCCEEECTTCTTCCCCGG-GT-TCTTCCEEEC
T ss_pred hHHcCCCcCCEEECcCCcccC------------------chh-hccCCceeEEECCCCCCcccccc-hh-hCCCCcEEEe
Confidence 235566666666666666551 222 45566666666666644423332 32 5566666666
Q ss_pred ecCcccccCCccccCCCCCCEEEccccccCCCCCcCcccccCCCCCcEEEccCccccccCChhhhhcccccceeecccCc
Q 041479 204 AGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSLSGTLPNSLANFSSHLRYLYMSANP 283 (771)
Q Consensus 204 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~ 283 (771)
++|.+.+..+ +..+++|+.|++++|.+++..+ +..+++|+.|++++|.+++. +. +..+. +|++|++++|+
T Consensus 163 ~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~-----~~~l~~L~~L~l~~n~l~~~-~~-~~~~~-~L~~L~l~~n~ 232 (347)
T 4fmz_A 163 TESKVKDVTP--IANLTDLYSLSLNYNQIEDISP-----LASLTSLHYFTAYVNQITDI-TP-VANMT-RLNSLKIGNNK 232 (347)
T ss_dssp CSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGG-----GGGCTTCCEEECCSSCCCCC-GG-GGGCT-TCCEEECCSSC
T ss_pred cCCCcCCchh--hccCCCCCEEEccCCccccccc-----ccCCCccceeecccCCCCCC-ch-hhcCC-cCCEEEccCCc
Confidence 6666654332 5556666666666666654322 24555566666666655522 22 33333 45555555555
Q ss_pred CcccCcccccccCCcceEecCCccceeccCccccCCCCCCEEEccCCcccccCCcccccccccccccccCccceecCCcc
Q 041479 284 ISGSIPTEIGNLKNLIIIAIEKFILIRNIPISVGYLLKLQVLSLFENNISREIPSSLGNFTFLTELNLCGNSIRGSVPSA 363 (771)
Q Consensus 284 l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 363 (771)
+++..+ +.. +++|++|++++|+++.. +.+..+++|++|++++|++++. ..
T Consensus 233 l~~~~~--~~~------------------------l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~ 282 (347)
T 4fmz_A 233 ITDLSP--LAN------------------------LSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SV 282 (347)
T ss_dssp CCCCGG--GTT------------------------CTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GG
T ss_pred cCCCcc--hhc------------------------CCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hh
Confidence 553222 444 44555555555555432 2344555555555555555532 23
Q ss_pred cccccce-eeecccCcccCCCCcCCCCCCCCCeEECCCCcccccCCcchhhhhcccccccEEECcCCCCC
Q 041479 364 LGSCHQL-WLDLSHNHLTGPIPLAVGNPKSIPHLDLSKNELSGEIPSSLAWIFGYISIFAKLNLSYNNLD 432 (771)
Q Consensus 364 ~~~l~~l-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~l~~L~~L~Ls~N~l~ 432 (771)
+..++.| .|++++|++++..|..|..+++|++|++++|++++..| +. .+++|+.|++++|+|+
T Consensus 283 ~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~----~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 283 LNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LA----SLSKMDSADFANQVIK 346 (347)
T ss_dssp GGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GG----GCTTCSEESSSCC---
T ss_pred hcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hh----hhhccceeehhhhccc
Confidence 4445555 55555555555555556666666777777776665444 22 5666777777777654
No 74
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=3.6e-34 Score=309.30 Aligned_cols=305 Identities=24% Similarity=0.339 Sum_probs=216.0
Q ss_pred cccCCCCCcEEEcCCCcccccCCccccCCCCCCEEecccCcCcccCCcccccCCcccccCCccccCCCCCCEEecccccC
Q 041479 63 YIGNLTFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNALQGQIPDSRLILNKLEGNIPSELGSLLKFKGLGLANNYF 142 (771)
Q Consensus 63 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l 142 (771)
.+..+++|++|++++|.+.. +| .|..+++|++|++++|+++ .+|. +..+++|++|++++|.+
T Consensus 39 ~~~~l~~L~~L~l~~~~i~~-~~-~~~~~~~L~~L~l~~n~i~---------------~~~~-~~~l~~L~~L~L~~n~i 100 (347)
T 4fmz_A 39 TQEELESITKLVVAGEKVAS-IQ-GIEYLTNLEYLNLNGNQIT---------------DISP-LSNLVKLTNLYIGTNKI 100 (347)
T ss_dssp CHHHHTTCSEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCC---------------CCGG-GTTCTTCCEEECCSSCC
T ss_pred cchhcccccEEEEeCCcccc-ch-hhhhcCCccEEEccCCccc---------------cchh-hhcCCcCCEEEccCCcc
Confidence 35678888888888888875 44 4888888888888888865 2333 67777777777777776
Q ss_pred cCCCCccceeeecccccccccCccccCCCCCCEEecccCcCcccCChhhhhCCCCCcEEEeecCcccccCCccccCCCCC
Q 041479 143 TGPIPHLNMFQVSVYSLTGSIPIQLLNITSMEYFHVSENQLVGELPPHIGFTLPNVRILLLAGNQFFGNIPHSISNASKL 222 (771)
Q Consensus 143 ~~~lp~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 222 (771)
++ + ..+.++++|++|++++|.++ .+|. + ..+++|+.|++++|.....+ ..+..+++|
T Consensus 101 ~~------------------~-~~~~~l~~L~~L~l~~n~i~-~~~~-~-~~l~~L~~L~l~~n~~~~~~-~~~~~l~~L 157 (347)
T 4fmz_A 101 TD------------------I-SALQNLTNLRELYLNEDNIS-DISP-L-ANLTKMYSLNLGANHNLSDL-SPLSNMTGL 157 (347)
T ss_dssp CC------------------C-GGGTTCTTCSEEECTTSCCC-CCGG-G-TTCTTCCEEECTTCTTCCCC-GGGTTCTTC
T ss_pred cC------------------c-hHHcCCCcCCEEECcCCccc-Cchh-h-ccCCceeEEECCCCCCcccc-cchhhCCCC
Confidence 62 2 23666777777777777776 4554 3 36667777777766544333 336666666
Q ss_pred CEEEccccccCCCCCcCcccccCCCCCcEEEccCccccccCChhhhhcccccceeecccCcCcccCcccccccCCcceEe
Q 041479 223 EWLDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSLSGTLPNSLANFSSHLRYLYMSANPISGSIPTEIGNLKNLIIIA 302 (771)
Q Consensus 223 ~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 302 (771)
++|++++|.+++..+ +..+++|+.|++++|.++ .++. +..+. +|+.|++++|.++
T Consensus 158 ~~L~l~~~~~~~~~~-----~~~l~~L~~L~l~~n~l~-~~~~-~~~l~-~L~~L~l~~n~l~----------------- 212 (347)
T 4fmz_A 158 NYLTVTESKVKDVTP-----IANLTDLYSLSLNYNQIE-DISP-LASLT-SLHYFTAYVNQIT----------------- 212 (347)
T ss_dssp CEEECCSSCCCCCGG-----GGGCTTCSEEECTTSCCC-CCGG-GGGCT-TCCEEECCSSCCC-----------------
T ss_pred cEEEecCCCcCCchh-----hccCCCCCEEEccCCccc-cccc-ccCCC-ccceeecccCCCC-----------------
Confidence 666666666654432 245555555566555555 2222 33332 4555555555444
Q ss_pred cCCccceeccCccccCCCCCCEEEccCCcccccCCcccccccccccccccCccceecCCcccccccce-eeecccCcccC
Q 041479 303 IEKFILIRNIPISVGYLLKLQVLSLFENNISREIPSSLGNFTFLTELNLCGNSIRGSVPSALGSCHQL-WLDLSHNHLTG 381 (771)
Q Consensus 303 l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l-~L~Ls~N~l~~ 381 (771)
+..+ +..+++|++|++++|+++...+ +..+++|++|++++|.+++. ..+..++.| .|++++|++++
T Consensus 213 -------~~~~--~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~ 279 (347)
T 4fmz_A 213 -------DITP--VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISD 279 (347)
T ss_dssp -------CCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCC
T ss_pred -------CCch--hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCC
Confidence 3322 5677888899999999985443 88999999999999999864 468888889 89999999997
Q ss_pred CCCcCCCCCCCCCeEECCCCcccccCCcchhhhhcccccccEEECcCCCCCCCCCccccccccccccccCCC
Q 041479 382 PIPLAVGNPKSIPHLDLSKNELSGEIPSSLAWIFGYISIFAKLNLSYNNLDGDVPRKMIFKNASAISEAGNE 453 (771)
Q Consensus 382 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~~~~n~ 453 (771)
. ..+..+++|+.|++++|++++..|..+. .+++|+.|++++|++++..| ...+..+..+.+.+|+
T Consensus 280 ~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~----~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~l~~N~ 344 (347)
T 4fmz_A 280 I--SVLNNLSQLNSLFLNNNQLGNEDMEVIG----GLTNLTTLFLSQNHITDIRP-LASLSKMDSADFANQV 344 (347)
T ss_dssp C--GGGGGCTTCSEEECCSSCCCGGGHHHHH----TCTTCSEEECCSSSCCCCGG-GGGCTTCSEESSSCC-
T ss_pred C--hhhcCCCCCCEEECcCCcCCCcChhHhh----ccccCCEEEccCCccccccC-hhhhhccceeehhhhc
Confidence 5 4588999999999999999987777655 89999999999999997766 4456677778887775
No 75
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=1.7e-34 Score=334.75 Aligned_cols=309 Identities=16% Similarity=0.142 Sum_probs=267.8
Q ss_pred CcEEEEEcCCCCCcccCCccccCCCCCcEEEcCCCcccccCCccccCCCCCCEEecccCcCcccCCcccccCCcccccCC
Q 041479 44 QRVILLNLSGQNLTGTASPYIGNLTFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNALQGQIPDSRLILNKLEGNIP 123 (771)
Q Consensus 44 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~l~~n~l~~~~p 123 (771)
.+++.|++++|.++.+++..|..+++|++|+|++|.|++..|..|+.+++|++|+|++|.++ +..|
T Consensus 51 ~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~--------------~~~~ 116 (597)
T 3oja_B 51 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIR--------------YLPP 116 (597)
T ss_dssp CCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCC--------------CCCT
T ss_pred CCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCC--------------CCCH
Confidence 57889999999999887778999999999999999999988889999999999999999965 4566
Q ss_pred ccccCCCCCCEEecccccCcCCCCccceeeecccccccccCccccCCCCCCEEecccCcCcccCChhhhhCCCCCcEEEe
Q 041479 124 SELGSLLKFKGLGLANNYFTGPIPHLNMFQVSVYSLTGSIPIQLLNITSMEYFHVSENQLVGELPPHIGFTLPNVRILLL 203 (771)
Q Consensus 124 ~~~~~l~~L~~L~Ls~N~l~~~lp~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L 203 (771)
..|+++++|++|+|++|.|++ ..+..|.++++|++|+|++|.+++ +++..+..+++|++|+|
T Consensus 117 ~~~~~l~~L~~L~L~~n~l~~-----------------l~~~~~~~l~~L~~L~Ls~N~l~~-~~~~~~~~l~~L~~L~L 178 (597)
T 3oja_B 117 HVFQNVPLLTVLVLERNDLSS-----------------LPRGIFHNTPKLTTLSMSNNNLER-IEDDTFQATTSLQNLQL 178 (597)
T ss_dssp TTTTTCTTCCEEECCSSCCCC-----------------CCTTTTTTCTTCCEEECCSSCCCB-CCTTTTTTCTTCCEEEC
T ss_pred HHHcCCCCCCEEEeeCCCCCC-----------------CCHHHhccCCCCCEEEeeCCcCCC-CChhhhhcCCcCcEEEC
Confidence 778999999999999998872 223346899999999999999995 44444448999999999
Q ss_pred ecCcccccCCccccCCCCCCEEEccccccCCCCCcCcccccCCCCCcEEEccCccccccCChhhhhcccccceeecccCc
Q 041479 204 AGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSLSGTLPNSLANFSSHLRYLYMSANP 283 (771)
Q Consensus 204 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~ 283 (771)
++|+|++.. +..+++|+.|++++|.+++. ...++|+.|++++|.++ .+|..+. ++|+.|+|++|.
T Consensus 179 ~~N~l~~~~---~~~l~~L~~L~l~~n~l~~l--------~~~~~L~~L~ls~n~l~-~~~~~~~---~~L~~L~L~~n~ 243 (597)
T 3oja_B 179 SSNRLTHVD---LSLIPSLFHANVSYNLLSTL--------AIPIAVEELDASHNSIN-VVRGPVN---VELTILKLQHNN 243 (597)
T ss_dssp TTSCCSBCC---GGGCTTCSEEECCSSCCSEE--------ECCTTCSEEECCSSCCC-EEECSCC---SCCCEEECCSSC
T ss_pred cCCCCCCcC---hhhhhhhhhhhcccCccccc--------cCCchhheeeccCCccc-ccccccC---CCCCEEECCCCC
Confidence 999999753 56688999999999998754 33467999999999998 4444332 479999999999
Q ss_pred CcccCcccccccCCcceEecCCccceeccCccccCCCCCCEEEccCCcccccCCcccccccccccccccCccceecCCcc
Q 041479 284 ISGSIPTEIGNLKNLIIIAIEKFILIRNIPISVGYLLKLQVLSLFENNISREIPSSLGNFTFLTELNLCGNSIRGSVPSA 363 (771)
Q Consensus 284 l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 363 (771)
+++ +..+..+++|+.|++++|.+.+.+|..|..+++|+.|+|++|++++ +|..+..+++|+.|+|++|.++ .+|..
T Consensus 244 l~~--~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~ 319 (597)
T 3oja_B 244 LTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERN 319 (597)
T ss_dssp CCC--CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGG
T ss_pred CCC--ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCcc
Confidence 986 4789999999999999999999999999999999999999999985 5777888999999999999999 57777
Q ss_pred cccccce-eeecccCcccCCCCcCCCCCCCCCeEECCCCccccc
Q 041479 364 LGSCHQL-WLDLSHNHLTGPIPLAVGNPKSIPHLDLSKNELSGE 406 (771)
Q Consensus 364 ~~~l~~l-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 406 (771)
+..++.| .|+|++|++++.. +..+++|+.|+|++|++++.
T Consensus 320 ~~~l~~L~~L~L~~N~l~~~~---~~~~~~L~~L~l~~N~~~~~ 360 (597)
T 3oja_B 320 QPQFDRLENLYLDHNSIVTLK---LSTHHTLKNLTLSHNDWDCN 360 (597)
T ss_dssp HHHHTTCSEEECCSSCCCCCC---CCTTCCCSEEECCSSCEEHH
T ss_pred cccCCCCCEEECCCCCCCCcC---hhhcCCCCEEEeeCCCCCCh
Confidence 8889999 9999999998653 66789999999999999864
No 76
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=2.8e-35 Score=319.52 Aligned_cols=241 Identities=22% Similarity=0.287 Sum_probs=192.3
Q ss_pred ccccccccccccccceEEEEE-----ecCCCeEEEEEEeeccc-hhhHHHHHHHHHHHhcc-CCCCceeEEEEeecCCCC
Q 041479 521 KDLLLNVSYESLVKATVYKGI-----LDLDQTFIAVKVLFLHQ-RGALKSFMAECQALRNI-RHRNLVKIITACSTSDFQ 593 (771)
Q Consensus 521 ~~~~~~~~l~~~~~~~Vy~~~-----~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~ 593 (771)
..+.....+|+|.+|+||+|+ ...+++.||||++.... ....+.+.+|+++++++ +|||||++++++.+.+.
T Consensus 22 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~- 100 (359)
T 3vhe_A 22 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG- 100 (359)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTS-
T ss_pred cceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCC-
Confidence 334455678999999999999 44566899999997543 34457899999999999 79999999999877542
Q ss_pred CceeEEEEEEeccCCCCCCCcc----------------------------------------------------------
Q 041479 594 GNYFRALVYEFMHHGSLESCPR---------------------------------------------------------- 615 (771)
Q Consensus 594 ~~~~~~lv~e~~~~g~L~~~~~---------------------------------------------------------- 615 (771)
..++||||+++|+|.++..
T Consensus 101 ---~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (359)
T 3vhe_A 101 ---PLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVE 177 (359)
T ss_dssp ---CCEEEEECCTTEEHHHHHHTTTTSBCSCC------------------------------------------------
T ss_pred ---ceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhh
Confidence 4789999999999865511
Q ss_pred -----------cCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCccccc
Q 041479 616 -----------ILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSS 684 (771)
Q Consensus 616 -----------~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~ 684 (771)
.+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....... ....
T Consensus 178 ~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~--~~~~ 252 (359)
T 3vhe_A 178 EEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPD--YVRK 252 (359)
T ss_dssp ------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTT--CEEC
T ss_pred hcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEeccceeeeccccc--chhc
Confidence 188899999999999999999996 899999999999999999999999999986643322 1223
Q ss_pred ccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhhhcCccccccCcc
Q 041479 685 VGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFLVGGVQ 748 (771)
Q Consensus 685 ~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 748 (771)
....||+.|+||| +||++|||+| |+.||.+.... ..+............+..+++.+.....+
T Consensus 253 ~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 331 (359)
T 3vhe_A 253 GDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-EEFCRRLKEGTRMRAPDYTTPEMYQTMLD 331 (359)
T ss_dssp --CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS-HHHHHHHHHTCCCCCCTTCCHHHHHHHHH
T ss_pred cccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchh-HHHHHHHHcCCCCCCCCCCCHHHHHHHHH
Confidence 3456899999999 6999999999 99999764322 23444444444444555667777777789
Q ss_pred cChhchhhcCCHHHHHHHHHHhC
Q 041479 749 EGEETAEENIKKGQIRESLIAIL 771 (771)
Q Consensus 749 cl~~~p~~Rpt~~~vl~~L~~~l 771 (771)
||+.||++|||+.|+++.|++++
T Consensus 332 ~l~~dP~~Rps~~ell~~L~~~~ 354 (359)
T 3vhe_A 332 CWHGEPSQRPTFSELVEHLGNLL 354 (359)
T ss_dssp HTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HccCChhhCCCHHHHHHHHHHHH
Confidence 99999999999999999999864
No 77
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=1.3e-34 Score=309.38 Aligned_cols=243 Identities=24% Similarity=0.292 Sum_probs=184.4
Q ss_pred cccccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEE
Q 041479 522 DLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALV 601 (771)
Q Consensus 522 ~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv 601 (771)
.+.....+|+|.+|+||+|++. ++.||||++.... .....+.+|+.++++++|||||++++++...... ....++|
T Consensus 25 ~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~-~~~~~lv 100 (322)
T 3soc_A 25 PLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSV-DVDLWLI 100 (322)
T ss_dssp EEEEEEEEECSTTCEEEEEEET--TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSS-SEEEEEE
T ss_pred hchhhheecccCceEEEEEEEC--CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCC-CceEEEE
Confidence 3445567899999999999876 5799999996543 3345667799999999999999999999775421 2257999
Q ss_pred EEeccCCCCCCC--cccCCHHHHHHHHHHHHHHHHHHHhc-------CCCCeEecCCCCCCeeeCCCCceEEecccCccc
Q 041479 602 YEFMHHGSLESC--PRILSFLRRLNIAIDVASALEYLHHH-------CKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRF 672 (771)
Q Consensus 602 ~e~~~~g~L~~~--~~~l~~~~~~~i~~~ia~gL~~LH~~-------~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~ 672 (771)
|||+++|+|.++ ...+++..+..++.|++.||+|||+. ++++|+||||||+||+++.++.+||+|||+++.
T Consensus 101 ~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~~ 180 (322)
T 3soc_A 101 TAFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALK 180 (322)
T ss_dssp EECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EecCCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCcccc
Confidence 999999999877 34589999999999999999999974 123899999999999999999999999999986
Q ss_pred cCcccCCcccccccccccccccchh--------------------HHHHHHHHHhCCCCCCccccCC-----------cc
Q 041479 673 IPEVMSSNQCSSVGLKGTVGYATPE--------------------YGILLLEIFTGKRPTSDMFTEG-----------LD 721 (771)
Q Consensus 673 ~~~~~~~~~~~~~~~~gt~~y~aPE--------------------~Gv~l~el~tg~~P~~~~~~~~-----------~~ 721 (771)
...... .......+||+.|+||| +||++|||+||+.||.+..... ..
T Consensus 181 ~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~ 258 (322)
T 3soc_A 181 FEAGKS--AGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPS 258 (322)
T ss_dssp ECTTSC--CCCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCC
T ss_pred cccccC--ccccccCccCccccCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCc
Confidence 654332 11233457999999999 6999999999999996532211 11
Q ss_pred HHHHHHhhCC----Cchhhhc-----CccccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 722 LHNFVKMALP----DQILQVL-----DPLFLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 722 ~~~~~~~~~~----~~~~~~~-----~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
...+...... +...... .+.+...+.+||+.||++|||+.|+++.|+++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~l 316 (322)
T 3soc_A 259 LEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARLSAGCVGERITQM 316 (322)
T ss_dssp HHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred hhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 2222221111 1111111 11244556699999999999999999999876
No 78
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=2.5e-35 Score=321.07 Aligned_cols=237 Identities=22% Similarity=0.323 Sum_probs=175.9
Q ss_pred ccccccccccccceEEEEEec---CCCeEEEEEEeecc-chhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeE
Q 041479 523 LLLNVSYESLVKATVYKGILD---LDQTFIAVKVLFLH-QRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFR 598 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~---~~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 598 (771)
+.....+|+|.+|+||+|+++ .++..||||++... .....++|.+|++++++++|||||++++++.+.+ ..
T Consensus 47 ~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-----~~ 121 (373)
T 2qol_A 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSK-----PV 121 (373)
T ss_dssp CCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS-----SC
T ss_pred ceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCC-----ce
Confidence 444556899999999999987 44568999999755 3445678999999999999999999999998765 67
Q ss_pred EEEEEeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccC
Q 041479 599 ALVYEFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIP 674 (771)
Q Consensus 599 ~lv~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~ 674 (771)
++||||+++|+|.++ ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 122 ~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~ 198 (373)
T 2qol_A 122 MIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRVLE 198 (373)
T ss_dssp EEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-------
T ss_pred EEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCccccccc
Confidence 999999999999876 23689999999999999999999986 89999999999999999999999999998765
Q ss_pred cccCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhhhc
Q 041479 675 EVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQVL 738 (771)
Q Consensus 675 ~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 738 (771)
..... ........+|+.|+||| |||++||+++ |+.||.+... ..+.+.+...........+
T Consensus 199 ~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~--~~~~~~i~~~~~~~~~~~~ 275 (373)
T 2qol_A 199 DDPEA-AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN--QDVIKAVDEGYRLPPPMDC 275 (373)
T ss_dssp ----------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCH--HHHHHHHHTTEECCCCTTC
T ss_pred cCCcc-ceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHHcCCCCCCCccc
Confidence 43221 11122334678899999 7999999998 9999975422 2233333333222223344
Q ss_pred CccccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 739 DPLFLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 739 ~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
...+...+.+||+.||++|||+.++++.|+++
T Consensus 276 ~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~ 307 (373)
T 2qol_A 276 PAALYQLMLDCWQKDRNNRPKFEQIVSILDKL 307 (373)
T ss_dssp BHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred cHHHHHHHHHHhCcChhhCcCHHHHHHHHHHH
Confidence 55566667799999999999999999999876
No 79
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=2.7e-35 Score=310.53 Aligned_cols=241 Identities=21% Similarity=0.254 Sum_probs=185.4
Q ss_pred ccccccccccccceEEEEE----ecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeE
Q 041479 523 LLLNVSYESLVKATVYKGI----LDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFR 598 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~----~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 598 (771)
+.....+|+|.+|+||+|+ ...+++.||||++........+++.+|++++++++||||+++++++...+.. ..
T Consensus 12 ~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~---~~ 88 (295)
T 3ugc_A 12 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRR---NL 88 (295)
T ss_dssp EEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHT---SC
T ss_pred hhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCC---ce
Confidence 3445678999999999998 4567889999999776666678899999999999999999999998654311 46
Q ss_pred EEEEEeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccC
Q 041479 599 ALVYEFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIP 674 (771)
Q Consensus 599 ~lv~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~ 674 (771)
++||||+++|+|.++ ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 89 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~ 165 (295)
T 3ugc_A 89 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLP 165 (295)
T ss_dssp EEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCSCC---
T ss_pred EEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCccccccc
Confidence 899999999999876 33589999999999999999999986 99999999999999999999999999998765
Q ss_pred cccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccC----------Cc----cHHHH
Q 041479 675 EVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTE----------GL----DLHNF 725 (771)
Q Consensus 675 ~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~----------~~----~~~~~ 725 (771)
..... ........|++.|+||| +|+++||++||..|+...... .. ...+.
T Consensus 166 ~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (295)
T 3ugc_A 166 QDKEF-FKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 244 (295)
T ss_dssp -----------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHH
T ss_pred CCcce-eeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHH
Confidence 43221 11222345788899999 699999999999998542110 00 11122
Q ss_pred HHhhCCCchhhhcCccccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 726 VKMALPDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 726 ~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
.........+..+++.+...+.+||+.||++|||+.|+++.|+++
T Consensus 245 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l 289 (295)
T 3ugc_A 245 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 289 (295)
T ss_dssp HHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred HhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 222223333445566666777799999999999999999999986
No 80
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.1e-34 Score=306.49 Aligned_cols=232 Identities=23% Similarity=0.263 Sum_probs=180.6
Q ss_pred cccccccccccccceEEEEEecCCCeEEEEEEeeccch--------------------------hhHHHHHHHHHHHhcc
Q 041479 522 DLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQR--------------------------GALKSFMAECQALRNI 575 (771)
Q Consensus 522 ~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~--------------------------~~~~~~~~E~~~l~~l 575 (771)
.+.....+|+|.+|+||+|+++.+++.||||++..... ...+++.+|+++++++
T Consensus 14 ~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l 93 (298)
T 2zv2_A 14 QYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKL 93 (298)
T ss_dssp TEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTC
T ss_pred ceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhC
Confidence 34455678999999999999999999999999965421 1235789999999999
Q ss_pred CCCCceeEEEEeecCCCCCceeEEEEEEeccCCCCCCC--cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCC
Q 041479 576 RHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESC--PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSN 653 (771)
Q Consensus 576 ~H~nIv~l~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~--~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~N 653 (771)
+||||+++++++.+... ...|+||||+++|+|.++ ...+++.++..++.|++.||+|||+. +|+||||||+|
T Consensus 94 ~h~~iv~~~~~~~~~~~---~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~N 167 (298)
T 2zv2_A 94 DHPNVVKLVEVLDDPNE---DHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPSN 167 (298)
T ss_dssp CCTTBCCEEEEEECSSS---SEEEEEEECCTTCBSCCSSCSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGG
T ss_pred CCCCCCeEEEEEEcCCC---CEEEEEEecCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHH
Confidence 99999999999876321 168999999999999877 44689999999999999999999996 99999999999
Q ss_pred eeeCCCCceEEecccCccccCcccCCcccccccccccccccchh------------------HHHHHHHHHhCCCCCCcc
Q 041479 654 VLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE------------------YGILLLEIFTGKRPTSDM 715 (771)
Q Consensus 654 ILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE------------------~Gv~l~el~tg~~P~~~~ 715 (771)
|+++.++.+||+|||+++....... ......||+.|+||| +||++|||++|+.||.+.
T Consensus 168 il~~~~~~~kl~Dfg~~~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~ 243 (298)
T 2zv2_A 168 LLVGEDGHIKIADFGVSNEFKGSDA----LLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDE 243 (298)
T ss_dssp EEECTTSCEEECCCTTCEECSSSSC----EECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred EEECCCCCEEEecCCCccccccccc----cccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCc
Confidence 9999999999999999986543321 122356999999999 699999999999999753
Q ss_pred ccCCccHHH-HHHhhCCCchhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 716 FTEGLDLHN-FVKMALPDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 716 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
.. ..+.. ......+......+++.+.....+||+.||++|||+.|+++
T Consensus 244 ~~--~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~s~~e~l~ 292 (298)
T 2zv2_A 244 RI--MCLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKL 292 (298)
T ss_dssp SH--HHHHHHHHHCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred cH--HHHHHHHhcccCCCCCccccCHHHHHHHHHHhhcChhhCCCHHHHhc
Confidence 21 11222 22222222222345556666777999999999999999974
No 81
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=1.2e-34 Score=308.17 Aligned_cols=239 Identities=24% Similarity=0.304 Sum_probs=193.4
Q ss_pred ccccccccccccccceEEEEEec-----CCCeEEEEEEeeccc-hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCC
Q 041479 521 KDLLLNVSYESLVKATVYKGILD-----LDQTFIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQG 594 (771)
Q Consensus 521 ~~~~~~~~l~~~~~~~Vy~~~~~-----~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 594 (771)
..+.....+|+|.+|+||+|++. .+++.||||++.... ....+++.+|++++++++|||||++++++.+.+
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~--- 99 (314)
T 2ivs_A 23 KNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDG--- 99 (314)
T ss_dssp GGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSS---
T ss_pred hheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCC---
Confidence 34455567899999999999873 455799999997543 445678999999999999999999999987766
Q ss_pred ceeEEEEEEeccCCCCCCCc---------------------------ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEec
Q 041479 595 NYFRALVYEFMHHGSLESCP---------------------------RILSFLRRLNIAIDVASALEYLHHHCKKPIVHC 647 (771)
Q Consensus 595 ~~~~~lv~e~~~~g~L~~~~---------------------------~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHr 647 (771)
..++||||+++|+|.++. ..+++.++..++.|++.||+|||+. +|+||
T Consensus 100 --~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~ 174 (314)
T 2ivs_A 100 --PLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHR 174 (314)
T ss_dssp --SCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECC
T ss_pred --ceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCccc
Confidence 679999999999997651 2378899999999999999999996 89999
Q ss_pred CCCCCCeeeCCCCceEEecccCccccCcccCCcccccccccccccccchh---------------HHHHHHHHHh-CCCC
Q 041479 648 DLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRP 711 (771)
Q Consensus 648 dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P 711 (771)
||||+||+++.++.+||+|||+++....... ........||+.|+||| +||++|||++ |+.|
T Consensus 175 dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p 252 (314)
T 2ivs_A 175 DLAARNILVAEGRKMKISDFGLSRDVYEEDS--YVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNP 252 (314)
T ss_dssp CCSGGGEEEETTTEEEECCCTTCEECTTTSC--EECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCS
T ss_pred ccchheEEEcCCCCEEEcccccccccccccc--ceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCC
Confidence 9999999999999999999999986644322 11223345788999999 6999999999 9999
Q ss_pred CCccccCCccHHHHHHhhCCCchhhhcCccccccCcccChhchhhcCCHHHHHHHHHHhC
Q 041479 712 TSDMFTEGLDLHNFVKMALPDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAIL 771 (771)
Q Consensus 712 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~l 771 (771)
|.+... ..+.+..........+..+++.+.....+||+.||++|||+.|+++.|++++
T Consensus 253 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~l~~~~ 310 (314)
T 2ivs_A 253 YPGIPP--ERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDLEKMM 310 (314)
T ss_dssp STTCCG--GGHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCH--HHHHHHhhcCCcCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 976432 2344455444444445556667777778999999999999999999999863
No 82
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=1.8e-34 Score=306.58 Aligned_cols=255 Identities=28% Similarity=0.500 Sum_probs=157.1
Q ss_pred CCCCEEecccCcCcc--cCChhhhhCCCCCcEEEeec-CcccccCCccccCCCCCCEEEccccccCCCCCcCcccccCCC
Q 041479 171 TSMEYFHVSENQLVG--ELPPHIGFTLPNVRILLLAG-NQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCT 247 (771)
Q Consensus 171 ~~L~~L~Ls~N~l~g--~lp~~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~ 247 (771)
.+++.|+|++|.++| .+|+.+. .+++|++|+|++ |.+.+.+|..|.++++|++|+|++|++++.+|..| .+++
T Consensus 50 ~~l~~L~L~~~~l~~~~~~~~~l~-~l~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~---~~l~ 125 (313)
T 1ogq_A 50 YRVNNLDLSGLNLPKPYPIPSSLA-NLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFL---SQIK 125 (313)
T ss_dssp CCEEEEEEECCCCSSCEECCGGGG-GCTTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGG---GGCT
T ss_pred ceEEEEECCCCCccCCcccChhHh-CCCCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHH---hCCC
Confidence 345556666666555 5555544 555555555553 55555555555555555555555555555555444 4445
Q ss_pred CCcEEEccCccccccCChhhhhcccccceeecccCcCcccCcccccccCCcceEecCCccceeccCccccCCCCCCEEEc
Q 041479 248 YLEVVSLSVNSLSGTLPNSLANFSSHLRYLYMSANPISGSIPTEIGNLKNLIIIAIEKFILIRNIPISVGYLLKLQVLSL 327 (771)
Q Consensus 248 ~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L 327 (771)
+|++|++++|.+++.+|..+..+. +|++|++++|++++.+|..|+.++ ++|++|++
T Consensus 126 ~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~l~~l~-----------------------~~L~~L~L 181 (313)
T 1ogq_A 126 TLVTLDFSYNALSGTLPPSISSLP-NLVGITFDGNRISGAIPDSYGSFS-----------------------KLFTSMTI 181 (313)
T ss_dssp TCCEEECCSSEEESCCCGGGGGCT-TCCEEECCSSCCEEECCGGGGCCC-----------------------TTCCEEEC
T ss_pred CCCEEeCCCCccCCcCChHHhcCC-CCCeEECcCCcccCcCCHHHhhhh-----------------------hcCcEEEC
Confidence 555555555555555555555443 455555555555544444444444 05555555
Q ss_pred cCCcccccCCcccccccccccccccCccceecCCcccccccce-eeecccCcccCCCCcCCCCCCCCCeEECCCCccccc
Q 041479 328 FENNISREIPSSLGNFTFLTELNLCGNSIRGSVPSALGSCHQL-WLDLSHNHLTGPIPLAVGNPKSIPHLDLSKNELSGE 406 (771)
Q Consensus 328 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 406 (771)
++|++++.+|..+..++ |++|++++|++++.+|..+..++.| .|++++|++++.+|. +..+++|++|+|++|+|++.
T Consensus 182 ~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls~N~l~~~ 259 (313)
T 1ogq_A 182 SRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLRNNRIYGT 259 (313)
T ss_dssp CSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECCSSCCEEC
T ss_pred cCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECcCCcccCc
Confidence 55555555555555554 5555555555555555555555555 555566655554444 66678888888888888888
Q ss_pred CCcchhhhhcccccccEEECcCCCCCCCCCccccccccccccccCCCcccCCC
Q 041479 407 IPSSLAWIFGYISIFAKLNLSYNNLDGDVPRKMIFKNASAISEAGNEKLCGGI 459 (771)
Q Consensus 407 ~p~~l~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~ 459 (771)
+|..+. .+++|+.|+|++|++++.+|....+.++..+.+.+|+.+||.+
T Consensus 260 ~p~~l~----~l~~L~~L~Ls~N~l~~~ip~~~~l~~L~~l~l~~N~~lc~~p 308 (313)
T 1ogq_A 260 LPQGLT----QLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSP 308 (313)
T ss_dssp CCGGGG----GCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSSEEESTT
T ss_pred CChHHh----cCcCCCEEECcCCcccccCCCCccccccChHHhcCCCCccCCC
Confidence 887765 7788888888888888888877667778888889999999864
No 83
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=9.9e-35 Score=301.88 Aligned_cols=234 Identities=24% Similarity=0.340 Sum_probs=189.3
Q ss_pred cccccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEE
Q 041479 522 DLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALV 601 (771)
Q Consensus 522 ~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv 601 (771)
.+.....+|+|.+|+||+|++.. ++.||||++..... ..+++.+|++++++++||||+++++++.+.+ ..++|
T Consensus 11 ~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-----~~~lv 83 (269)
T 4hcu_A 11 ELTFVQEIGSGQFGLVHLGYWLN-KDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQA-----PICLV 83 (269)
T ss_dssp GEEEEEEEEECSSCEEEEEEETT-TEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSS-----SEEEE
T ss_pred hceeeheecCCCccEEEEEEecC-CCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEecCC-----ceEEE
Confidence 34445678999999999999875 45899999965432 3478999999999999999999999988766 67999
Q ss_pred EEeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCccc
Q 041479 602 YEFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVM 677 (771)
Q Consensus 602 ~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~ 677 (771)
|||+++|+|.++ ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 84 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 160 (269)
T 4hcu_A 84 FEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ 160 (269)
T ss_dssp EECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHH
T ss_pred EEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEeccccccccccccc
Confidence 999999999766 33588999999999999999999986 89999999999999999999999999998654432
Q ss_pred CCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhhhcCcc
Q 041479 678 SSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPL 741 (771)
Q Consensus 678 ~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 741 (771)
........||+.|+||| +|+++|||++ |+.||.+... ....+......+...+...++.
T Consensus 161 ---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 235 (269)
T 4hcu_A 161 ---YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN--SEVVEDISTGFRLYKPRLASTH 235 (269)
T ss_dssp ---HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH--HHHHHHHHTTCCCCCCTTSCHH
T ss_pred ---cccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCH--HHHHHHHhcCccCCCCCcCCHH
Confidence 12223445788999999 6999999999 9999975322 2233333333344444555666
Q ss_pred ccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 742 FLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 742 ~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
+.....+||+.||++|||+.++++.|+++
T Consensus 236 ~~~li~~~l~~~p~~Rps~~~ll~~l~~l 264 (269)
T 4hcu_A 236 VYQIMNHCWRERPEDRPAFSRLLRQLAEI 264 (269)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHHHccCCcccCcCHHHHHHHHHHH
Confidence 66777799999999999999999999986
No 84
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=1.8e-34 Score=314.24 Aligned_cols=225 Identities=19% Similarity=0.164 Sum_probs=180.6
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEecc
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMH 606 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~~~ 606 (771)
..+|+|.+|+||+|++..+++.||||++........+.+.+|++++++++|||||++++++.+.+ ..++||||++
T Consensus 95 ~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~-----~~~lv~E~~~ 169 (373)
T 2x4f_A 95 EILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKN-----DIVLVMEYVD 169 (373)
T ss_dssp EECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSS-----EEEEEEECCT
T ss_pred eEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECC-----EEEEEEeCCC
Confidence 35899999999999999989999999998766566788999999999999999999999998776 7899999999
Q ss_pred CCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeee--CCCCceEEecccCccccCcccCCc
Q 041479 607 HGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLL--DNDMTAHMGDFGLTRFIPEVMSSN 680 (771)
Q Consensus 607 ~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl--~~~~~~kl~DfGla~~~~~~~~~~ 680 (771)
+|+|.++ ...+++.++..++.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||+++.......
T Consensus 170 ~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~-- 244 (373)
T 2x4f_A 170 GGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK-- 244 (373)
T ss_dssp TCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB--
T ss_pred CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc--
Confidence 9999665 34589999999999999999999986 89999999999999 5678999999999987654322
Q ss_pred ccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCC--CchhhhcCcccc
Q 041479 681 QCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALP--DQILQVLDPLFL 743 (771)
Q Consensus 681 ~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 743 (771)
....+||+.|+||| +||++|||++|+.||.+... ...+..+.....+ ......+++.+.
T Consensus 245 ---~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~ 320 (373)
T 2x4f_A 245 ---LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDND-AETLNNILACRWDLEDEEFQDISEEAK 320 (373)
T ss_dssp ---CCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSSH-HHHHHHHHHTCCCSCSGGGTTSCHHHH
T ss_pred ---cccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHhccCCCChhhhccCCHHHH
Confidence 12346999999999 69999999999999965321 1123334333332 333345566666
Q ss_pred ccCcccChhchhhcCCHHHHHH
Q 041479 744 VGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 744 ~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
....+||+.||++|||+.|+++
T Consensus 321 ~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 321 EFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp HHHHTTSCSSGGGSCCHHHHHH
T ss_pred HHHHHHcCCChhhCCCHHHHhc
Confidence 7777999999999999999986
No 85
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=2.4e-34 Score=298.73 Aligned_cols=234 Identities=26% Similarity=0.313 Sum_probs=187.9
Q ss_pred cccccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEE
Q 041479 522 DLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALV 601 (771)
Q Consensus 522 ~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv 601 (771)
.+.....+|+|.+|+||+|+++. +..||||++..... ..+++.+|++++++++||||+++++++.+.+ ..++|
T Consensus 9 ~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-----~~~lv 81 (268)
T 3sxs_A 9 EITLLKELGSGQFGVVKLGKWKG-QYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEY-----PIYIV 81 (268)
T ss_dssp GEEEEEEEEEETTEEEEEEEETT-TEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-----SEEEE
T ss_pred heeeeeeeccCCCceEEEEEecC-ceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCC-----ceEEE
Confidence 34445678999999999998875 45899999965432 3477999999999999999999999987765 67999
Q ss_pred EEeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCccc
Q 041479 602 YEFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVM 677 (771)
Q Consensus 602 ~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~ 677 (771)
|||+++|+|.++ ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 158 (268)
T 3sxs_A 82 TEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQ 158 (268)
T ss_dssp EECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTTCEEECCTTC
T ss_pred EEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCccceecchhh
Confidence 999999999876 34589999999999999999999996 99999999999999999999999999998654432
Q ss_pred CCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhhhcCcc
Q 041479 678 SSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPL 741 (771)
Q Consensus 678 ~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 741 (771)
.....+..||+.|+||| +|+++||+++ |+.||...... ..........+...+...++.
T Consensus 159 ---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 233 (268)
T 3sxs_A 159 ---YVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNS--EVVLKVSQGHRLYRPHLASDT 233 (268)
T ss_dssp ---EEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHH--HHHHHHHTTCCCCCCTTSCHH
T ss_pred ---hhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChH--HHHHHHHcCCCCCCCCcChHH
Confidence 12223445788899999 6999999999 99999753221 122222333333334445666
Q ss_pred ccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 742 FLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 742 ~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
+.....+||+.||++|||+.++++.|+++
T Consensus 234 l~~li~~~l~~~p~~Rps~~~ll~~L~~l 262 (268)
T 3sxs_A 234 IYQIMYSCWHELPEKRPTFQQLLSSIEPL 262 (268)
T ss_dssp HHHHHHHTTCSSGGGSCCHHHHHHHHGGG
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHHHh
Confidence 66677799999999999999999999876
No 86
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=2.1e-34 Score=308.84 Aligned_cols=229 Identities=23% Similarity=0.249 Sum_probs=184.9
Q ss_pred cccccccccccccceEEEEEecCCCeEEEEEEeecc---chhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeE
Q 041479 522 DLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLH---QRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFR 598 (771)
Q Consensus 522 ~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 598 (771)
++.....+|+|.+|+||+|+.+.+++.||||++... .....+.+.+|+++++.++||||+++++++.+.+ ..
T Consensus 6 ~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~-----~~ 80 (337)
T 1o6l_A 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHD-----RL 80 (337)
T ss_dssp GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSS-----EE
T ss_pred HeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCC-----EE
Confidence 344556789999999999999999999999999754 2345678999999999999999999999998776 78
Q ss_pred EEEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCc
Q 041479 599 ALVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPE 675 (771)
Q Consensus 599 ~lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~ 675 (771)
|+||||+++|+|..+ .+.+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++....
T Consensus 81 ~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~ 157 (337)
T 1o6l_A 81 CFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEGIS 157 (337)
T ss_dssp EEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC
T ss_pred EEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeeccchhhccc
Confidence 999999999999766 34688999999999999999999986 999999999999999999999999999985432
Q ss_pred ccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCc
Q 041479 676 VMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDP 740 (771)
Q Consensus 676 ~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 740 (771)
.. ......+||+.|+||| +||++|||++|+.||.+... ..+.+.... .....+..+++
T Consensus 158 ~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~~~~~~i~~-~~~~~p~~~s~ 230 (337)
T 1o6l_A 158 DG----ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--ERLFELILM-EEIRFPRTLSP 230 (337)
T ss_dssp TT----CCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHH-CCCCCCTTSCH
T ss_pred CC----CcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCH--HHHHHHHHc-CCCCCCCCCCH
Confidence 21 1223467999999999 69999999999999965311 112222111 12223445566
Q ss_pred cccccCcccChhchhhcC-----CHHHHHH
Q 041479 741 LFLVGGVQEGEETAEENI-----KKGQIRE 765 (771)
Q Consensus 741 ~~~~~~~~cl~~~p~~Rp-----t~~~vl~ 765 (771)
.+.....+||+.||++|| ++.|+++
T Consensus 231 ~~~~li~~lL~~dP~~R~g~~~~~~~ei~~ 260 (337)
T 1o6l_A 231 EAKSLLAGLLKKDPKQRLGGGPSDAKEVME 260 (337)
T ss_dssp HHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred HHHHHHHHHhhcCHHHhcCCCCCCHHHHHc
Confidence 666677799999999999 8998875
No 87
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=7.3e-35 Score=316.89 Aligned_cols=236 Identities=25% Similarity=0.264 Sum_probs=186.2
Q ss_pred ccccccccccccceEEEEEe-----cCCCeEEEEEEeecc-chhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCce
Q 041479 523 LLLNVSYESLVKATVYKGIL-----DLDQTFIAVKVLFLH-QRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNY 596 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~-----~~~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~ 596 (771)
+.....+|+|.+|+||+|++ ..+++.||||++... ......++.+|+.++++++|||||++++++.+..
T Consensus 73 ~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~----- 147 (367)
T 3l9p_A 73 ITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL----- 147 (367)
T ss_dssp EEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-----
T ss_pred eEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCC-----
Confidence 44455689999999999994 446678999999643 3445568999999999999999999999988766
Q ss_pred eEEEEEEeccCCCCCCCc----------ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCC---ceE
Q 041479 597 FRALVYEFMHHGSLESCP----------RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDM---TAH 663 (771)
Q Consensus 597 ~~~lv~e~~~~g~L~~~~----------~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~---~~k 663 (771)
..++||||+++|+|.++. ..+++.++..++.|++.||+|||+. +|+||||||+|||++.++ .+|
T Consensus 148 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~k 224 (367)
T 3l9p_A 148 PRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAK 224 (367)
T ss_dssp SCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEE
T ss_pred CCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEE
Confidence 569999999999997661 3488999999999999999999996 999999999999999554 599
Q ss_pred EecccCccccCcccCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHH
Q 041479 664 MGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVK 727 (771)
Q Consensus 664 l~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~ 727 (771)
|+|||+|+....... ........||+.|+||| +||++|||++ |+.||.+.. ...+.+...
T Consensus 225 L~DFG~a~~~~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~--~~~~~~~i~ 300 (367)
T 3l9p_A 225 IGDFGMARDIYRAGY--YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS--NQEVLEFVT 300 (367)
T ss_dssp ECCCHHHHHHHHHSS--CTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC--HHHHHHHHH
T ss_pred ECCCccccccccccc--cccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHH
Confidence 999999985533221 11222346899999999 6999999998 999997532 223344444
Q ss_pred hhCCCchhhhcCccccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 728 MALPDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 728 ~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
.......+..+++.+...+.+||+.||++|||+.++++.|+.+
T Consensus 301 ~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~ 343 (367)
T 3l9p_A 301 SGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC 343 (367)
T ss_dssp TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred cCCCCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence 4333334445566666777799999999999999999999865
No 88
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=1.2e-34 Score=313.57 Aligned_cols=229 Identities=19% Similarity=0.197 Sum_probs=185.5
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccch------hhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCce
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQR------GALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNY 596 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~------~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~ 596 (771)
+.....+|+|.+|+||+|+++.+++.||||++..... ...+.+.+|+.++++++|||||++++++.+.+
T Consensus 14 y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~----- 88 (361)
T 2yab_A 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRT----- 88 (361)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS-----
T ss_pred eEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCC-----
Confidence 3345568999999999999999999999999975432 13578999999999999999999999998776
Q ss_pred eEEEEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCC----ceEEecccC
Q 041479 597 FRALVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDM----TAHMGDFGL 669 (771)
Q Consensus 597 ~~~lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~----~~kl~DfGl 669 (771)
..|+||||+++|+|.++ ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||+
T Consensus 89 ~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~DFG~ 165 (361)
T 2yab_A 89 DVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGL 165 (361)
T ss_dssp EEEEEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCSS
T ss_pred EEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEecCC
Confidence 78999999999999776 34689999999999999999999996 999999999999998776 799999999
Q ss_pred ccccCcccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCC--C
Q 041479 670 TRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALP--D 732 (771)
Q Consensus 670 a~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~--~ 732 (771)
++....... ....+||+.|+||| +||++|||++|+.||.+.... ..+..+...... .
T Consensus 166 a~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~-~~~~~i~~~~~~~~~ 239 (361)
T 2yab_A 166 AHEIEDGVE-----FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ-ETLANITAVSYDFDE 239 (361)
T ss_dssp CEECCTTCC-----CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH-HHHHHHHTTCCCCCH
T ss_pred ceEcCCCCc-----cccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhcCCCCCc
Confidence 986654221 23457999999999 699999999999999653211 112233333222 2
Q ss_pred chhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 733 QILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 733 ~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
.....+++.+.....+||..||++|||+.|+++
T Consensus 240 ~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 240 EFFSQTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred hhccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 333455666666777999999999999999985
No 89
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=1.1e-34 Score=310.54 Aligned_cols=235 Identities=20% Similarity=0.257 Sum_probs=183.2
Q ss_pred ccccccccccccceEEEEEecCCCeE----EEEEEeecc-chhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCcee
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTF----IAVKVLFLH-QRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYF 597 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~----vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 597 (771)
+.....+|+|.+|+||+|++..+++. ||+|.+... .....++|.+|+.++++++|||||+++++|.+..
T Consensus 17 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~------ 90 (327)
T 3poz_A 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST------ 90 (327)
T ss_dssp EEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS------
T ss_pred cccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC------
Confidence 44456789999999999998777654 577777533 2345678999999999999999999999998754
Q ss_pred EEEEEEeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCcccc
Q 041479 598 RALVYEFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673 (771)
Q Consensus 598 ~~lv~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~ 673 (771)
.++|+||+++|+|.++ ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+|+..
T Consensus 91 ~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~ 167 (327)
T 3poz_A 91 VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167 (327)
T ss_dssp EEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTHHHHH
T ss_pred eEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCcceeEc
Confidence 5799999999999766 34689999999999999999999996 9999999999999999999999999999876
Q ss_pred CcccCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhhh
Q 041479 674 PEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQV 737 (771)
Q Consensus 674 ~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 737 (771)
..... ........||+.|+||| +||++||+++ |+.||.+... ..+.+..........+..
T Consensus 168 ~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~ 243 (327)
T 3poz_A 168 GAEEK--EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILEKGERLPQPPI 243 (327)
T ss_dssp TTTCC---------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG--GGHHHHHHTTCCCCCCTT
T ss_pred cCCcc--cccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCH--HHHHHHHHcCCCCCCCcc
Confidence 54332 12223445788999999 6999999999 9999976422 335555555444444555
Q ss_pred cCccccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 738 LDPLFLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 738 ~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
.+..+...+.+||+.||++|||+.++++.|+++
T Consensus 244 ~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~ 276 (327)
T 3poz_A 244 CTIDVYMIMVKCWMIDADSRPKFRELIIEFSKM 276 (327)
T ss_dssp BCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 666666777799999999999999999999875
No 90
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=2.8e-34 Score=312.59 Aligned_cols=230 Identities=17% Similarity=0.243 Sum_probs=185.2
Q ss_pred ccccccccccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCcee
Q 041479 521 KDLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYF 597 (771)
Q Consensus 521 ~~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 597 (771)
..+.....+|+|++|+||+|+++.+++.||||++.... ....+.+.+|+++++.++|||||++++++.+.+ .
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~-----~ 89 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEE-----D 89 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS-----E
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC-----E
Confidence 44555667899999999999999999999999996542 344678999999999999999999999998776 7
Q ss_pred EEEEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccC
Q 041479 598 RALVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIP 674 (771)
Q Consensus 598 ~~lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~ 674 (771)
.|+||||+++|+|..+ ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+|+...
T Consensus 90 ~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~~ 166 (384)
T 4fr4_A 90 MFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLP 166 (384)
T ss_dssp EEEEECCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccceeeecc
Confidence 8999999999999766 34689999999999999999999996 99999999999999999999999999998664
Q ss_pred cccCCcccccccccccccccchh------------------HHHHHHHHHhCCCCCCccccCCc-cHHHHHHhhCCCchh
Q 041479 675 EVMSSNQCSSVGLKGTVGYATPE------------------YGILLLEIFTGKRPTSDMFTEGL-DLHNFVKMALPDQIL 735 (771)
Q Consensus 675 ~~~~~~~~~~~~~~gt~~y~aPE------------------~Gv~l~el~tg~~P~~~~~~~~~-~~~~~~~~~~~~~~~ 735 (771)
... .....+||+.|+||| +||++|||++|+.||........ .+..... ......+
T Consensus 167 ~~~-----~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~-~~~~~~p 240 (384)
T 4fr4_A 167 RET-----QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFE-TTVVTYP 240 (384)
T ss_dssp TTC-----CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHH-HCCCCCC
T ss_pred CCC-----ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHh-hcccCCC
Confidence 322 223467999999999 69999999999999964322221 1111111 1222334
Q ss_pred hhcCccccccCcccChhchhhcCC-HHHHH
Q 041479 736 QVLDPLFLVGGVQEGEETAEENIK-KGQIR 764 (771)
Q Consensus 736 ~~~~~~~~~~~~~cl~~~p~~Rpt-~~~vl 764 (771)
..+++.+.....+||+.||++||+ +.++.
T Consensus 241 ~~~s~~~~~li~~lL~~dP~~R~s~~~~l~ 270 (384)
T 4fr4_A 241 SAWSQEMVSLLKKLLEPNPDQRFSQLSDVQ 270 (384)
T ss_dssp TTSCHHHHHHHHHHSCSSGGGSCCSHHHHH
T ss_pred CcCCHHHHHHHHHHhcCCHhHhcccHHHHH
Confidence 455666666777999999999998 66665
No 91
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.2e-34 Score=307.15 Aligned_cols=226 Identities=15% Similarity=0.172 Sum_probs=183.9
Q ss_pred ccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEe
Q 041479 525 LNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEF 604 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~ 604 (771)
....+|+|.+|+||+|+++.+++.||+|++.... ...+.+.+|+++++.++|||||++++++.+.+ ..++||||
T Consensus 9 ~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~-----~~~lv~e~ 82 (321)
T 1tki_A 9 IAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESME-----ELVMIFEF 82 (321)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETT-----EEEEEECC
T ss_pred eeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCC-----EEEEEEEe
Confidence 3456899999999999999999999999996543 34567899999999999999999999998776 78999999
Q ss_pred ccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCC--CCceEEecccCccccCcccC
Q 041479 605 MHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN--DMTAHMGDFGLTRFIPEVMS 678 (771)
Q Consensus 605 ~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~--~~~~kl~DfGla~~~~~~~~ 678 (771)
+++|+|.++ ...+++.++..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||+++.......
T Consensus 83 ~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~ 159 (321)
T 1tki_A 83 ISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDN 159 (321)
T ss_dssp CCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCE
T ss_pred CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCc
Confidence 999999765 23589999999999999999999996 9999999999999987 78999999999987644221
Q ss_pred Ccccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCC--CchhhhcCcc
Q 041479 679 SNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALP--DQILQVLDPL 741 (771)
Q Consensus 679 ~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 741 (771)
.....||+.|+||| +||++|||++|+.||.+.... ..+..+.....+ ......+++.
T Consensus 160 -----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~ 233 (321)
T 1tki_A 160 -----FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQ-QIIENIMNAEYTFDEEAFKEISIE 233 (321)
T ss_dssp -----EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHH-HHHHHHHHTCCCCCHHHHTTSCHH
T ss_pred -----cccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHH-HHHHHHHcCCCCCChhhhccCCHH
Confidence 22346899999999 699999999999999753221 122333333332 2223445666
Q ss_pred ccccCcccChhchhhcCCHHHHHH
Q 041479 742 FLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 742 ~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
+.....+|+..||++|||+.|+++
T Consensus 234 ~~~li~~~L~~dp~~Rpt~~e~l~ 257 (321)
T 1tki_A 234 AMDFVDRLLVKERKSRMTASEALQ 257 (321)
T ss_dssp HHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHcCCChhHCcCHHHHhc
Confidence 666777999999999999999986
No 92
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=2.2e-34 Score=302.18 Aligned_cols=232 Identities=23% Similarity=0.332 Sum_probs=187.7
Q ss_pred cccccccccccccceEEEEEecCCCeEEEEEEeeccchh-------hHHHHHHHHHHHhccCCCCceeEEEEeecCCCCC
Q 041479 522 DLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRG-------ALKSFMAECQALRNIRHRNLVKIITACSTSDFQG 594 (771)
Q Consensus 522 ~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~-------~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 594 (771)
.+.....+|+|.+|+||+|++..+++.||||++...... ..+.+.+|++++++++||||+++++++.+..
T Consensus 20 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--- 96 (287)
T 4f0f_A 20 EIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP--- 96 (287)
T ss_dssp TEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT---
T ss_pred cceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC---
Confidence 344456789999999999999989999999999644321 1268999999999999999999999986554
Q ss_pred ceeEEEEEEeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCC--eEecCCCCCCeeeCCCCc-----eE
Q 041479 595 NYFRALVYEFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKP--IVHCDLKPSNVLLDNDMT-----AH 663 (771)
Q Consensus 595 ~~~~~lv~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~--ivHrdlk~~NILl~~~~~-----~k 663 (771)
++||||+++|+|.+. ...+++..+..++.|++.||+|||+. + |+||||||+||+++.++. +|
T Consensus 97 ----~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~k 169 (287)
T 4f0f_A 97 ----RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAK 169 (287)
T ss_dssp ----EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEE
T ss_pred ----eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEE
Confidence 699999999999654 34689999999999999999999986 6 999999999999988776 99
Q ss_pred EecccCccccCcccCCcccccccccccccccchh-----------------HHHHHHHHHhCCCCCCccccCCccHHH-H
Q 041479 664 MGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE-----------------YGILLLEIFTGKRPTSDMFTEGLDLHN-F 725 (771)
Q Consensus 664 l~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE-----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~-~ 725 (771)
|+|||+++..... .....||+.|+||| +||++|||++|+.||.+.......... .
T Consensus 170 l~Dfg~~~~~~~~-------~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~ 242 (287)
T 4f0f_A 170 VADFGLSQQSVHS-------VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMI 242 (287)
T ss_dssp ECCCTTCBCCSSC-------EECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHH
T ss_pred eCCCCcccccccc-------ccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHH
Confidence 9999999744321 22356899999999 699999999999999764332222222 2
Q ss_pred HHhhCCCchhhhcCccccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 726 VKMALPDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 726 ~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
.....+...+..+++.+.....+||+.||++|||+.|+++.|+++
T Consensus 243 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 243 REEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp HHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred hccCCCCCCCcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 333444555566677777778899999999999999999999875
No 93
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=1.5e-34 Score=311.66 Aligned_cols=238 Identities=22% Similarity=0.257 Sum_probs=189.0
Q ss_pred cccccccccccccceEEEEEecC-----CCeEEEEEEeeccc-hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCc
Q 041479 522 DLLLNVSYESLVKATVYKGILDL-----DQTFIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGN 595 (771)
Q Consensus 522 ~~~~~~~l~~~~~~~Vy~~~~~~-----~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~ 595 (771)
.+.....+|+|.+|+||+|++.. +++.||||++.... ....+.+.+|++++++++||||+++++++.+.+
T Consensus 48 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~---- 123 (343)
T 1luf_A 48 NIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGK---- 123 (343)
T ss_dssp GCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS----
T ss_pred HCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCC----
Confidence 34445668999999999999973 44799999997543 345678999999999999999999999998765
Q ss_pred eeEEEEEEeccCCCCCCCc---------------------------ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecC
Q 041479 596 YFRALVYEFMHHGSLESCP---------------------------RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCD 648 (771)
Q Consensus 596 ~~~~lv~e~~~~g~L~~~~---------------------------~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrd 648 (771)
..|+||||+++|+|.++. ..+++.++..++.|++.||+|||+. +|+|||
T Consensus 124 -~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH~D 199 (343)
T 1luf_A 124 -PMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHRD 199 (343)
T ss_dssp -SCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSC
T ss_pred -ceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCC
Confidence 679999999999997651 4588999999999999999999996 999999
Q ss_pred CCCCCeeeCCCCceEEecccCccccCcccCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCC
Q 041479 649 LKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPT 712 (771)
Q Consensus 649 lk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~ 712 (771)
|||+||+++.++.+||+|||+++....... ........||+.|+||| +||++|||++ |+.||
T Consensus 200 lkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~ 277 (343)
T 1luf_A 200 LATRNCLVGENMVVKIADFGLSRNIYSADY--YKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPY 277 (343)
T ss_dssp CSGGGEEECGGGCEEECCCSCHHHHTGGGC--BC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTT
T ss_pred CCcceEEECCCCeEEEeecCCCcccccCcc--ccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcC
Confidence 999999999999999999999986543321 11223346899999999 6999999999 99999
Q ss_pred CccccCCccHHHHHHhhCCCchhhhcCccccccCcccChhchhhcCCHHHHHHHHHHhC
Q 041479 713 SDMFTEGLDLHNFVKMALPDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAIL 771 (771)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~l 771 (771)
.+... ...............+..+++.+.....+||+.||++|||+.++++.|+++.
T Consensus 278 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~~L~~~~ 334 (343)
T 1luf_A 278 YGMAH--EEVIYYVRDGNILACPENCPLELYNLMRLCWSKLPADRPSFCSIHRILQRMC 334 (343)
T ss_dssp TTSCH--HHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred CCCCh--HHHHHHHhCCCcCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHHHHH
Confidence 75422 1222223222223334455666667777999999999999999999999863
No 94
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=1.6e-34 Score=323.46 Aligned_cols=233 Identities=21% Similarity=0.315 Sum_probs=188.7
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
+.....+|+|.+|+||+|+++.+ +.||||++.... ...++|.+|++++++++|||||++++++... ..|+||
T Consensus 190 ~~~~~~lG~G~fg~V~~~~~~~~-~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~------~~~lv~ 261 (454)
T 1qcf_A 190 LKLEKKLGAGQFGEVWMATYNKH-TKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTKE------PIYIIT 261 (454)
T ss_dssp EEEEEEEECCSSEEEEEEEETTT-EEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEECSS------SCEEEE
T ss_pred eEEEEEcccCCceEEEEEEECCc-cEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEeCC------ccEEEE
Confidence 44455789999999999998754 589999997543 3468899999999999999999999998633 468999
Q ss_pred EeccCCCCCCCc-----ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCccc
Q 041479 603 EFMHHGSLESCP-----RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVM 677 (771)
Q Consensus 603 e~~~~g~L~~~~-----~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~ 677 (771)
|||++|+|.++. ..+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 262 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~ 338 (454)
T 1qcf_A 262 EFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFGLARVIEDNE 338 (454)
T ss_dssp CCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHH
T ss_pred eecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCc
Confidence 999999998772 2578889999999999999999996 89999999999999999999999999998764322
Q ss_pred CCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhhhcCcc
Q 041479 678 SSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPL 741 (771)
Q Consensus 678 ~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 741 (771)
.....+..+|+.|+||| |||++|||+| |+.||.+... ....+.+........+..+++.
T Consensus 339 ---~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~--~~~~~~i~~~~~~~~~~~~~~~ 413 (454)
T 1qcf_A 339 ---YTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN--PEVIRALERGYRMPRPENCPEE 413 (454)
T ss_dssp ---HHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH--HHHHHHHHHTCCCCCCTTSCHH
T ss_pred ---eeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCH--HHHHHHHHcCCCCCCCCCCCHH
Confidence 11223345788999999 7999999999 9999976422 2233444444443344555666
Q ss_pred ccccCcccChhchhhcCCHHHHHHHHHHhC
Q 041479 742 FLVGGVQEGEETAEENIKKGQIRESLIAIL 771 (771)
Q Consensus 742 ~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~l 771 (771)
+...+.+||+.||++|||+.+|++.|+++.
T Consensus 414 l~~li~~cl~~dp~~RPt~~~i~~~L~~~~ 443 (454)
T 1qcf_A 414 LYNIMMRCWKNRPEERPTFEYIQSVLDDFY 443 (454)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred HHHHHHHHccCChhHCcCHHHHHHHHHHHH
Confidence 767778999999999999999999999863
No 95
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=2.6e-34 Score=304.66 Aligned_cols=233 Identities=25% Similarity=0.338 Sum_probs=179.7
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeecc--chhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLH--QRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRAL 600 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~l 600 (771)
+.....+|+|.+|+||+|++.. .||||+++.. .....+.|.+|++++++++||||+++++++... ..++
T Consensus 38 ~~~~~~lG~G~~g~Vy~~~~~~---~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------~~~l 108 (307)
T 3lb7_A 38 VMLSTRIGSGSFGTVYKGKWHG---DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKD------NLAI 108 (307)
T ss_dssp CCEEEEEEECSSCEEEEEESSS---EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS------SCEE
T ss_pred eEEEeEecCCCCeEEEEEEECC---EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccC------cEEE
Confidence 3445668999999999998753 5899988653 234567899999999999999999999987544 3589
Q ss_pred EEEeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcc
Q 041479 601 VYEFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676 (771)
Q Consensus 601 v~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~ 676 (771)
||||+++|+|.++ ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 109 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~ 185 (307)
T 3lb7_A 109 VTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRW 185 (307)
T ss_dssp EEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCCSSCC----
T ss_pred EEecCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCCCceecccc
Confidence 9999999999765 45689999999999999999999996 8999999999999999999999999999865432
Q ss_pred cCCcccccccccccccccchh------------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhC-CC---ch
Q 041479 677 MSSNQCSSVGLKGTVGYATPE------------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMAL-PD---QI 734 (771)
Q Consensus 677 ~~~~~~~~~~~~gt~~y~aPE------------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~-~~---~~ 734 (771)
.. ........||+.|+||| +||++|||++|+.||.+...... ......... ++ ..
T Consensus 186 ~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~Pf~~~~~~~~-~~~~~~~~~~~~~~~~~ 262 (307)
T 3lb7_A 186 SG--SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQ-IIFMVGRGYASPDLSKL 262 (307)
T ss_dssp ----------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHH-HHHHHHHTCCCCCSTTS
T ss_pred cc--cccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCCCccCCcHHH-HHHHHhcCCCCcchhhh
Confidence 21 11223356999999999 69999999999999976432222 222222222 22 22
Q ss_pred hhhcCccccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 735 LQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 735 ~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
...+++.+.....+||+.||++|||+.++++.|+.+
T Consensus 263 ~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l 298 (307)
T 3lb7_A 263 YKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELL 298 (307)
T ss_dssp CSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHH
T ss_pred hcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHH
Confidence 234455566667799999999999999999999865
No 96
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=1.7e-34 Score=308.95 Aligned_cols=235 Identities=20% Similarity=0.252 Sum_probs=186.8
Q ss_pred ccccccccccccceEEEEEecCCCeE----EEEEEeeccc-hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCcee
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTF----IAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYF 597 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~----vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 597 (771)
+.....+|+|.+|+||+|++..+++. ||+|.+.... ....+.+.+|+.++++++|||||++++++.+. .
T Consensus 15 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~------~ 88 (325)
T 3kex_A 15 LRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGS------S 88 (325)
T ss_dssp EEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECBS------S
T ss_pred ceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCC------c
Confidence 44456789999999999999877654 7777774332 23345778899999999999999999998643 4
Q ss_pred EEEEEEeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCcccc
Q 041479 598 RALVYEFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673 (771)
Q Consensus 598 ~~lv~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~ 673 (771)
.++||||+++|+|.++ ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 89 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~ 165 (325)
T 3kex_A 89 LQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLL 165 (325)
T ss_dssp EEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCSGGGGS
T ss_pred cEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCCccccc
Confidence 6899999999999766 34688999999999999999999996 8999999999999999999999999999876
Q ss_pred CcccCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhhh
Q 041479 674 PEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQV 737 (771)
Q Consensus 674 ~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 737 (771)
...... .......||+.|+||| +||++||+++ |+.||.+.. .....+..........+..
T Consensus 166 ~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~ 241 (325)
T 3kex_A 166 PPDDKQ--LLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLR--LAEVPDLLEKGERLAQPQI 241 (325)
T ss_dssp CCCTTC--CC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSC--TTHHHHHHHTTCBCCCCTT
T ss_pred Cccccc--ccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccC--HHHHHHHHHcCCCCCCCCc
Confidence 543321 1223446788999999 6999999999 999997642 2234444444444444555
Q ss_pred cCccccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 738 LDPLFLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 738 ~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
+++.+...+.+||..||++|||+.++++.|+++
T Consensus 242 ~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~ 274 (325)
T 3kex_A 242 CTIDVYMVMVKCWMIDENIRPTFKELANEFTRM 274 (325)
T ss_dssp BCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 667777777899999999999999999999876
No 97
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=2.8e-34 Score=300.80 Aligned_cols=236 Identities=23% Similarity=0.332 Sum_probs=187.5
Q ss_pred ccccccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEE
Q 041479 521 KDLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRAL 600 (771)
Q Consensus 521 ~~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~l 600 (771)
..+.....+|+|.+|+||+|.++. +..||||++..... ..+++.+|++++++++||||+++++++.+.+ ..++
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-----~~~l 96 (283)
T 3gen_A 24 KDLTFLKELGTGQFGVVKYGKWRG-QYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQR-----PIFI 96 (283)
T ss_dssp GGEEEEEECC---CEEEEEEEETT-TEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSS-----SEEE
T ss_pred HHHHhHhhcCCCCCceEEEEEEcC-CCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCC-----CeEE
Confidence 344455678999999999998874 45899999975432 3477999999999999999999999997766 6799
Q ss_pred EEEeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcc
Q 041479 601 VYEFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676 (771)
Q Consensus 601 v~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~ 676 (771)
||||+++|+|.++ ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 97 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 173 (283)
T 3gen_A 97 ITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD 173 (283)
T ss_dssp EECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCH
T ss_pred EEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEcccccccccccc
Confidence 9999999999776 34689999999999999999999986 9999999999999999999999999999865433
Q ss_pred cCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhhhcCc
Q 041479 677 MSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQVLDP 740 (771)
Q Consensus 677 ~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 740 (771)
. ........||+.|+||| +|+++|||++ |+.||.+... ....+..........+...++
T Consensus 174 ~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 248 (283)
T 3gen_A 174 E---YTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTN--SETAEHIAQGLRLYRPHLASE 248 (283)
T ss_dssp H---HHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCH--HHHHHHHHTTCCCCCCTTCCH
T ss_pred c---cccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccCh--hHHHHHHhcccCCCCCCcCCH
Confidence 2 12223345788999999 6999999999 9999975322 223333333333344455566
Q ss_pred cccccCcccChhchhhcCCHHHHHHHHHHhC
Q 041479 741 LFLVGGVQEGEETAEENIKKGQIRESLIAIL 771 (771)
Q Consensus 741 ~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~l 771 (771)
.+.....+||+.||++|||+.++++.|++++
T Consensus 249 ~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~ 279 (283)
T 3gen_A 249 KVYTIMYSCWHEKADERPTFKILLSNILDVM 279 (283)
T ss_dssp HHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCChhHCcCHHHHHHHHHHHh
Confidence 6666777999999999999999999999863
No 98
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-34 Score=315.11 Aligned_cols=236 Identities=23% Similarity=0.303 Sum_probs=175.9
Q ss_pred cccccccccceEEEEEecCC---CeEEEEEEeecc-chhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEE
Q 041479 526 NVSYESLVKATVYKGILDLD---QTFIAVKVLFLH-QRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALV 601 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~---~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv 601 (771)
...+|+|.+|+||+|++..+ ...||||.+... .....++|.+|+.++++++|||||++++++.+.+. ..++|
T Consensus 94 ~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~----~~~lv 169 (373)
T 3c1x_A 94 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG----SPLVV 169 (373)
T ss_dssp EEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSS----CCEEE
T ss_pred CcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCC----CeEEE
Confidence 34689999999999987543 246899998643 34556889999999999999999999999765431 56899
Q ss_pred EEeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCccc
Q 041479 602 YEFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVM 677 (771)
Q Consensus 602 ~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~ 677 (771)
|||+++|+|.++ ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 170 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~ 246 (373)
T 3c1x_A 170 LPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 246 (373)
T ss_dssp EECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred EECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeeccccccccccc
Confidence 999999999776 24578889999999999999999996 99999999999999999999999999998664433
Q ss_pred CCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhhhcCcc
Q 041479 678 SSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPL 741 (771)
Q Consensus 678 ~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 741 (771)
........+..||+.|+||| |||++|||+| |..||.+.... ..........+...+..+++.
T Consensus 247 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~--~~~~~~~~~~~~~~p~~~~~~ 324 (373)
T 3c1x_A 247 FDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTF--DITVYLLQGRRLLQPEYCPDP 324 (373)
T ss_dssp -----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSS--CHHHHHHTTCCCCCCTTCCHH
T ss_pred cccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHH--HHHHHHHcCCCCCCCCCCCHH
Confidence 22222233456788999999 7999999999 77788664322 233333333333334455666
Q ss_pred ccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 742 FLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 742 ~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
+...+.+||+.||++|||+.|+++.|+++
T Consensus 325 l~~li~~cl~~dp~~RPs~~ell~~L~~i 353 (373)
T 3c1x_A 325 LYEVMLKCWHPKAEMRPSFSELVSRISAI 353 (373)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 66677799999999999999999999986
No 99
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.6e-34 Score=314.53 Aligned_cols=238 Identities=24% Similarity=0.291 Sum_probs=191.4
Q ss_pred cccccccccccccceEEEEEecC-------CCeEEEEEEeeccc-hhhHHHHHHHHHHHhcc-CCCCceeEEEEeecCCC
Q 041479 522 DLLLNVSYESLVKATVYKGILDL-------DQTFIAVKVLFLHQ-RGALKSFMAECQALRNI-RHRNLVKIITACSTSDF 592 (771)
Q Consensus 522 ~~~~~~~l~~~~~~~Vy~~~~~~-------~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~ 592 (771)
.+.....+|+|.+|+||+|++.. .+..||||++.... ....+++.+|+++++++ +|||||++++++.+.+
T Consensus 70 ~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~- 148 (382)
T 3tt0_A 70 RLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG- 148 (382)
T ss_dssp GEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-
T ss_pred heEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCC-
Confidence 34445679999999999999753 33589999996543 44567899999999999 8999999999998766
Q ss_pred CCceeEEEEEEeccCCCCCCCc-------------------ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCC
Q 041479 593 QGNYFRALVYEFMHHGSLESCP-------------------RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSN 653 (771)
Q Consensus 593 ~~~~~~~lv~e~~~~g~L~~~~-------------------~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~N 653 (771)
..++||||+++|+|.++. ..+++.++..++.|++.||+|||+. +|+||||||+|
T Consensus 149 ----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~N 221 (382)
T 3tt0_A 149 ----PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARN 221 (382)
T ss_dssp ----SCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGG
T ss_pred ----ceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcce
Confidence 579999999999997651 2489999999999999999999996 99999999999
Q ss_pred eeeCCCCceEEecccCccccCcccCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCcccc
Q 041479 654 VLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFT 717 (771)
Q Consensus 654 ILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~ 717 (771)
|+++.++.+||+|||+++....... ........||+.|+||| +||++|||++ |+.||.+...
T Consensus 222 Ill~~~~~~kL~DFG~a~~~~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~ 299 (382)
T 3tt0_A 222 VLVTEDNVMKIADFGLARDIHHIDY--YKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV 299 (382)
T ss_dssp EEECTTCCEEECSCSCCCCSSCCCT--TCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCH
T ss_pred EEEcCCCcEEEcccCcccccccccc--cccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH
Confidence 9999999999999999986654322 12223346789999999 6999999999 9999975421
Q ss_pred CCccHHHHHHhhCCCchhhhcCccccccCcccChhchhhcCCHHHHHHHHHHhC
Q 041479 718 EGLDLHNFVKMALPDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAIL 771 (771)
Q Consensus 718 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~l 771 (771)
..+.+..........+..+++.+.....+||+.||++|||+.|+++.|++++
T Consensus 300 --~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~ 351 (382)
T 3tt0_A 300 --EELFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIV 351 (382)
T ss_dssp --HHHHHHHHTTCCCCCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --HHHHHHHHcCCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 2244444444444444556666667777999999999999999999999863
No 100
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.3e-34 Score=306.66 Aligned_cols=228 Identities=19% Similarity=0.165 Sum_probs=183.6
Q ss_pred cccccccccccceEEEEEecCCCeEEEEEEeeccch------hhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCcee
Q 041479 524 LLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQR------GALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYF 597 (771)
Q Consensus 524 ~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~------~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 597 (771)
.....+|+|.+|+||+|+++.+++.||||++..... ...+.+.+|+.++++++|||||++++++.+.+ .
T Consensus 14 ~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-----~ 88 (326)
T 2y0a_A 14 DTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKT-----D 88 (326)
T ss_dssp EEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS-----E
T ss_pred EeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC-----E
Confidence 344568999999999999999999999999965432 13678999999999999999999999998766 7
Q ss_pred EEEEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCC----ceEEecccCc
Q 041479 598 RALVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDM----TAHMGDFGLT 670 (771)
Q Consensus 598 ~~lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~----~~kl~DfGla 670 (771)
.++||||+++|+|.++ ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||++
T Consensus 89 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a 165 (326)
T 2y0a_A 89 VILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA 165 (326)
T ss_dssp EEEEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECCCTTC
T ss_pred EEEEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEECCCC
Confidence 8999999999999776 34688999999999999999999986 999999999999998877 7999999999
Q ss_pred cccCcccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCC--Cc
Q 041479 671 RFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALP--DQ 733 (771)
Q Consensus 671 ~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~--~~ 733 (771)
+....... .....||+.|+||| +||++|||++|+.||.+.... ..+......... ..
T Consensus 166 ~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~~~~~~~~~~~~~ 239 (326)
T 2y0a_A 166 HKIDFGNE-----FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ-ETLANVSAVNYEFEDE 239 (326)
T ss_dssp EECCTTSC-----CCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH-HHHHHHHHTCCCCCHH
T ss_pred eECCCCCc-----cccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHH-HHHHHHHhcCCCcCcc
Confidence 86643221 22356999999999 699999999999999653211 112222222222 22
Q ss_pred hhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 734 ILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 734 ~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
....+++.+.....+||+.||++|||+.|+++
T Consensus 240 ~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 271 (326)
T 2y0a_A 240 YFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQ 271 (326)
T ss_dssp HHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred ccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 33445555666677999999999999999986
No 101
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=1.6e-33 Score=302.20 Aligned_cols=250 Identities=19% Similarity=0.244 Sum_probs=156.4
Q ss_pred EEEEEcCCCCCcccCCccccCCCCCcEEEcCCCcccccCCccccCCCCCCEEecccCcCcccCCcccccCCcccccCCcc
Q 041479 46 VILLNLSGQNLTGTASPYIGNLTFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNALQGQIPDSRLILNKLEGNIPSE 125 (771)
Q Consensus 46 l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~l~~n~l~~~~p~~ 125 (771)
++.+++++++++ .+|..+. ++|++|+|++|+|++..|.+|.++++|++|+|++|+++ +..|..
T Consensus 35 l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~--------------~~~~~~ 97 (332)
T 2ft3_A 35 LRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKIS--------------KIHEKA 97 (332)
T ss_dssp TTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC--------------EECGGG
T ss_pred CCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccC--------------ccCHhH
Confidence 345666677776 4444442 57788888888887766677777777777777777754 234455
Q ss_pred ccCCCCCCEEecccccCcCCCCccceeeecccccccccCccccCCCCCCEEecccCcCcccCChhhhhCCCCCcEEEeec
Q 041479 126 LGSLLKFKGLGLANNYFTGPIPHLNMFQVSVYSLTGSIPIQLLNITSMEYFHVSENQLVGELPPHIGFTLPNVRILLLAG 205 (771)
Q Consensus 126 ~~~l~~L~~L~Ls~N~l~~~lp~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~ 205 (771)
|+++++|++|++++|+++ .+|..++ ++|++|++++
T Consensus 98 ~~~l~~L~~L~L~~n~l~------------------------------------------~l~~~~~---~~L~~L~l~~ 132 (332)
T 2ft3_A 98 FSPLRKLQKLYISKNHLV------------------------------------------EIPPNLP---SSLVELRIHD 132 (332)
T ss_dssp STTCTTCCEEECCSSCCC------------------------------------------SCCSSCC---TTCCEEECCS
T ss_pred hhCcCCCCEEECCCCcCC------------------------------------------ccCcccc---ccCCEEECCC
Confidence 566666666666665554 3333322 3445555555
Q ss_pred CcccccCCccccCCCCCCEEEccccccCC--CCCcCcccccCCCCCcEEEccCccccccCChhhhhcccccceeecccCc
Q 041479 206 NQFFGNIPHSISNASKLEWLDFANNSLTG--LIPEDLDSLVNCTYLEVVSLSVNSLSGTLPNSLANFSSHLRYLYMSANP 283 (771)
Q Consensus 206 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~ 283 (771)
|+|++..+..|.++++|+.|++++|.++. ..|..| ..+ +|+.|++++|+++ .+|..+. ++|++|++++|.
T Consensus 133 n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~---~~l-~L~~L~l~~n~l~-~l~~~~~---~~L~~L~l~~n~ 204 (332)
T 2ft3_A 133 NRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAF---DGL-KLNYLRISEAKLT-GIPKDLP---ETLNELHLDHNK 204 (332)
T ss_dssp SCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSS---CSC-CCSCCBCCSSBCS-SCCSSSC---SSCSCCBCCSSC
T ss_pred CccCccCHhHhCCCccCCEEECCCCccccCCCCcccc---cCC-ccCEEECcCCCCC-ccCcccc---CCCCEEECCCCc
Confidence 55544444445555555555555555532 333333 333 5555556666555 3444433 357777777777
Q ss_pred CcccCcccccccCCcceEecCCccceeccCccccCCCCCCEEEccCCcccccCCcccccccccccccccCccceecCCcc
Q 041479 284 ISGSIPTEIGNLKNLIIIAIEKFILIRNIPISVGYLLKLQVLSLFENNISREIPSSLGNFTFLTELNLCGNSIRGSVPSA 363 (771)
Q Consensus 284 l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 363 (771)
+++..+..|.++++|+.|++++|.+.+..+..+..+++|+.|+|++|+++ .+|..+..+++|++|++++|+|++..+..
T Consensus 205 i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~ 283 (332)
T 2ft3_A 205 IQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVND 283 (332)
T ss_dssp CCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTS
T ss_pred CCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhH
Confidence 77666666777777777777777776666667777777888888888887 67777788888888888888887665555
Q ss_pred ccc
Q 041479 364 LGS 366 (771)
Q Consensus 364 ~~~ 366 (771)
|..
T Consensus 284 ~~~ 286 (332)
T 2ft3_A 284 FCP 286 (332)
T ss_dssp SSC
T ss_pred ccc
Confidence 543
No 102
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=2.2e-34 Score=307.71 Aligned_cols=243 Identities=22% Similarity=0.272 Sum_probs=177.4
Q ss_pred cccccccccccccceEEEEEecCCCe---EEEEEEeecc--chhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCc-
Q 041479 522 DLLLNVSYESLVKATVYKGILDLDQT---FIAVKVLFLH--QRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGN- 595 (771)
Q Consensus 522 ~~~~~~~l~~~~~~~Vy~~~~~~~~~---~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~- 595 (771)
.+.....+|+|.+|+||+|+++.++. .||||++... .....+++.+|++++++++||||+++++++......+.
T Consensus 24 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 103 (323)
T 3qup_A 24 QFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRL 103 (323)
T ss_dssp -CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC------
T ss_pred HeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccCC
Confidence 34445678999999999999887764 7999999654 34456889999999999999999999999877652211
Q ss_pred eeEEEEEEeccCCCCCCCc---------ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEec
Q 041479 596 YFRALVYEFMHHGSLESCP---------RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGD 666 (771)
Q Consensus 596 ~~~~lv~e~~~~g~L~~~~---------~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~D 666 (771)
...++||||+++|+|.++. ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 104 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~kl~D 180 (323)
T 3qup_A 104 PIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVAD 180 (323)
T ss_dssp -CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECC
T ss_pred CccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCEEEee
Confidence 2348999999999997661 1488999999999999999999996 999999999999999999999999
Q ss_pred ccCccccCcccCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhC
Q 041479 667 FGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMAL 730 (771)
Q Consensus 667 fGla~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~ 730 (771)
||+++....... ........+|+.|+||| +||++|||++ |+.||.+... ...........
T Consensus 181 fg~a~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~--~~~~~~~~~~~ 256 (323)
T 3qup_A 181 FGLSRKIYSGDY--YRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIEN--AEIYNYLIGGN 256 (323)
T ss_dssp CCC-------------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG--GGHHHHHHTTC
T ss_pred cccccccccccc--ccccccccCcccccCchhhcCCCCCCccchhhHHHHHHHHHhCCCCCccccCh--HHHHHHHhcCC
Confidence 999986644322 11222345788999999 6999999999 9999976432 23444433333
Q ss_pred CCchhhhcCccccccCcccChhchhhcCCHHHHHHHHHHhC
Q 041479 731 PDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAIL 771 (771)
Q Consensus 731 ~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~l 771 (771)
.......+++.+.....+||+.||++|||+.++++.|++++
T Consensus 257 ~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l 297 (323)
T 3qup_A 257 RLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENIL 297 (323)
T ss_dssp CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 33334455566666777999999999999999999999874
No 103
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=3.1e-34 Score=301.36 Aligned_cols=229 Identities=22% Similarity=0.297 Sum_probs=184.1
Q ss_pred ccccccccccccceEEEEEecCCC-------eEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCc
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQ-------TFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGN 595 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~-------~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~ 595 (771)
+.....+|+|.+|+||+|+++.++ +.||+|++........+.+.+|++++++++||||+++++++.+.+
T Consensus 10 y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---- 85 (289)
T 4fvq_A 10 LIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGD---- 85 (289)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTT----
T ss_pred eeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCC----
Confidence 444566899999999999988766 579999997776677789999999999999999999999998766
Q ss_pred eeEEEEEEeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCc--------eE
Q 041479 596 YFRALVYEFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMT--------AH 663 (771)
Q Consensus 596 ~~~~lv~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~--------~k 663 (771)
..++||||+++|+|.++ ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +|
T Consensus 86 -~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~k 161 (289)
T 4fvq_A 86 -ENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPFIK 161 (289)
T ss_dssp -CCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCCEEE
T ss_pred -CCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcccccccceee
Confidence 56899999999999876 23489999999999999999999996 8999999999999988876 99
Q ss_pred EecccCccccCcccCCcccccccccccccccchh----------------HHHHHHHHHhCCC-CCCccccCCccHHHHH
Q 041479 664 MGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKR-PTSDMFTEGLDLHNFV 726 (771)
Q Consensus 664 l~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~-P~~~~~~~~~~~~~~~ 726 (771)
|+|||+++...... ...||+.|+||| +||++|||++|.. |+... .. .......
T Consensus 162 l~Dfg~~~~~~~~~--------~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~-~~-~~~~~~~ 231 (289)
T 4fvq_A 162 LSDPGISITVLPKD--------ILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSAL-DS-QRKLQFY 231 (289)
T ss_dssp ECCCCSCTTTSCHH--------HHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTS-CH-HHHHHHH
T ss_pred eccCcccccccCcc--------ccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCcccc-ch-HHHHHHh
Confidence 99999997543321 235789999999 6999999999554 44332 11 1111111
Q ss_pred HhhCCCchhhhcCccccccCcccChhchhhcCCHHHHHHHHHHhC
Q 041479 727 KMALPDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAIL 771 (771)
Q Consensus 727 ~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~l 771 (771)
......+...++.+.....+||+.||++|||+.++++.|++++
T Consensus 232 --~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~ 274 (289)
T 4fvq_A 232 --EDRHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLF 274 (289)
T ss_dssp --HTTCCCCCCSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC
T ss_pred --hccCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence 1222333444666667777999999999999999999999874
No 104
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=2.7e-34 Score=309.87 Aligned_cols=238 Identities=23% Similarity=0.271 Sum_probs=189.9
Q ss_pred ccccccccccccceEEEEEec-----CCCeEEEEEEeeccc-hhhHHHHHHHHHHHhcc-CCCCceeEEEEeecCCCCCc
Q 041479 523 LLLNVSYESLVKATVYKGILD-----LDQTFIAVKVLFLHQ-RGALKSFMAECQALRNI-RHRNLVKIITACSTSDFQGN 595 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~-----~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~ 595 (771)
+.....+|+|.+|+||+|++. .+++.||||++.... ....+.+.+|+.+++++ +||||+++++++...+
T Consensus 47 y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~---- 122 (344)
T 1rjb_A 47 LEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG---- 122 (344)
T ss_dssp EEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS----
T ss_pred ceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC----
Confidence 344557899999999999973 355689999996542 33457899999999999 8999999999998766
Q ss_pred eeEEEEEEeccCCCCCCCc--------------------------ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCC
Q 041479 596 YFRALVYEFMHHGSLESCP--------------------------RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDL 649 (771)
Q Consensus 596 ~~~~lv~e~~~~g~L~~~~--------------------------~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdl 649 (771)
..++||||+++|+|.++. ..+++..+..++.|++.||+|||+. +|+||||
T Consensus 123 -~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Di 198 (344)
T 1rjb_A 123 -PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDL 198 (344)
T ss_dssp -SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTC
T ss_pred -ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCC
Confidence 679999999999997651 1378899999999999999999996 9999999
Q ss_pred CCCCeeeCCCCceEEecccCccccCcccCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCC
Q 041479 650 KPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTS 713 (771)
Q Consensus 650 k~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~ 713 (771)
||+||+++.++.+||+|||+++....... ........||+.|+||| +||++|||+| |+.||.
T Consensus 199 kp~NIll~~~~~~kL~Dfg~~~~~~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~ 276 (344)
T 1rjb_A 199 AARNVLVTHGKVVKICDFGLARDIMSDSN--YVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYP 276 (344)
T ss_dssp SGGGEEEETTTEEEECCCGGGSCGGGCTT--SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSST
T ss_pred ChhhEEEcCCCcEEeCCCccCcccccCcc--ceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcc
Confidence 99999999999999999999986644322 12223446788999999 6999999998 999997
Q ss_pred ccccCCccHHHHHHhhCCCchhhhcCccccccCcccChhchhhcCCHHHHHHHHHHhC
Q 041479 714 DMFTEGLDLHNFVKMALPDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAIL 771 (771)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~l 771 (771)
+... ...+............+..+++.+.....+||+.||++|||+.++++.|+.++
T Consensus 277 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~ 333 (344)
T 1rjb_A 277 GIPV-DANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFLGCQL 333 (344)
T ss_dssp TCCC-SHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC
T ss_pred cCCc-HHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence 6432 23344555555544445556667777778999999999999999999999864
No 105
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=3.2e-34 Score=309.48 Aligned_cols=230 Identities=23% Similarity=0.202 Sum_probs=181.2
Q ss_pred ccccccccccccccceEEEEEecCCCeEEEEEEeecc---chhhHHHHHHHHHHHhcc-CCCCceeEEEEeecCCCCCce
Q 041479 521 KDLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLH---QRGALKSFMAECQALRNI-RHRNLVKIITACSTSDFQGNY 596 (771)
Q Consensus 521 ~~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~ 596 (771)
.++.....+|+|.+|+||+|+++.+++.||||++... .....+.+.+|+++++.+ +|||||++++++.+.+
T Consensus 23 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~----- 97 (353)
T 3txo_A 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPD----- 97 (353)
T ss_dssp CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS-----
T ss_pred hheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCC-----
Confidence 3455566799999999999999999999999999754 234567789999999998 6999999999998776
Q ss_pred eEEEEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCcccc
Q 041479 597 FRALVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673 (771)
Q Consensus 597 ~~~lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~ 673 (771)
..|+|||||++|+|..+ ...+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+|+..
T Consensus 98 ~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG~a~~~ 174 (353)
T 3txo_A 98 RLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCKEG 174 (353)
T ss_dssp EEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCS
T ss_pred EEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEccccceeec
Confidence 78999999999999766 35689999999999999999999996 9999999999999999999999999999853
Q ss_pred CcccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhc
Q 041479 674 PEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVL 738 (771)
Q Consensus 674 ~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 738 (771)
.... ......+||+.|+||| +||++|||++|+.||.+.... ..+..+..... ..+..+
T Consensus 175 ~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~-~~~~~i~~~~~--~~p~~~ 247 (353)
T 3txo_A 175 ICNG----VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENED-DLFEAILNDEV--VYPTWL 247 (353)
T ss_dssp CC-------------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHCCC--CCCTTS
T ss_pred ccCC----ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHH-HHHHHHHcCCC--CCCCCC
Confidence 3221 1233467999999999 699999999999999753211 11222322222 223345
Q ss_pred CccccccCcccChhchhhcCCH------HHHHH
Q 041479 739 DPLFLVGGVQEGEETAEENIKK------GQIRE 765 (771)
Q Consensus 739 ~~~~~~~~~~cl~~~p~~Rpt~------~~vl~ 765 (771)
++.+.....+|+++||++||++ .|+++
T Consensus 248 ~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 248 HEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp CHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred CHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 5556666779999999999998 66653
No 106
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=2.1e-34 Score=299.72 Aligned_cols=234 Identities=23% Similarity=0.282 Sum_probs=177.1
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccc----hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ----RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFR 598 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~----~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 598 (771)
+.....+|+|.+|+||+|++. ++.||||++.... ....+.+.+|+++++.++||||+++++++.+.+ ..
T Consensus 9 ~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~ 81 (271)
T 3dtc_A 9 LTLEEIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEP-----NL 81 (271)
T ss_dssp EEEEEEEEEETTEEEEEEEET--TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC-------C
T ss_pred eeeeeeeccCCCeEEEEEEEc--CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCC-----ce
Confidence 344556899999999999975 6689999986543 233578999999999999999999999998766 67
Q ss_pred EEEEEeccCCCCCCC--cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCC--------CCceEEeccc
Q 041479 599 ALVYEFMHHGSLESC--PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN--------DMTAHMGDFG 668 (771)
Q Consensus 599 ~lv~e~~~~g~L~~~--~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~--------~~~~kl~DfG 668 (771)
++||||+++|+|.++ .+.+++..+..++.|++.||+|||+....+|+||||||+||+++. ++.+||+|||
T Consensus 82 ~lv~e~~~~~~L~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg 161 (271)
T 3dtc_A 82 CLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFG 161 (271)
T ss_dssp EEEEECCTTEEHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCC
T ss_pred EEEEEcCCCCCHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCC
Confidence 999999999999776 457899999999999999999999973233999999999999986 6789999999
Q ss_pred CccccCcccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCc
Q 041479 669 LTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQ 733 (771)
Q Consensus 669 la~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~ 733 (771)
+++....... ....||+.|+||| +|+++||+++|+.||.+..... ..........+..
T Consensus 162 ~~~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~ 234 (271)
T 3dtc_A 162 LAREWHRTTK------MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLA-VAYGVAMNKLALP 234 (271)
T ss_dssp C-------------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHH-HHHHHHTSCCCCC
T ss_pred cccccccccc------cCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHhhhcCCCCCC
Confidence 9986543221 2346899999999 6999999999999997642211 1222223333344
Q ss_pred hhhhcCccccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 734 ILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 734 ~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
.+..+++.+.....+||+.||++|||+.|+++.|+++
T Consensus 235 ~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 235 IPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred CCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 4555666677777799999999999999999999875
No 107
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=1.7e-34 Score=312.08 Aligned_cols=227 Identities=19% Similarity=0.184 Sum_probs=182.3
Q ss_pred ccccccccccceEEEEEecCCCeEEEEEEeeccch-----hhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEE
Q 041479 525 LNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQR-----GALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRA 599 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~-----~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 599 (771)
....+|+|.+|+||+|+++.+++.||||++..... ...+.+.+|+++++.++|||||++++++.+.+ ..|
T Consensus 28 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~-----~~~ 102 (351)
T 3c0i_A 28 LCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDG-----MLY 102 (351)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETT-----EEE
T ss_pred EeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC-----EEE
Confidence 34568999999999999999999999999965421 24678999999999999999999999998876 789
Q ss_pred EEEEeccCCCCCCC-------cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCc---eEEecccC
Q 041479 600 LVYEFMHHGSLESC-------PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMT---AHMGDFGL 669 (771)
Q Consensus 600 lv~e~~~~g~L~~~-------~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~---~kl~DfGl 669 (771)
+|||||++|+|.+. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||+
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~ 179 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGV 179 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCcc
Confidence 99999999999654 22478999999999999999999986 9999999999999986554 99999999
Q ss_pred ccccCcccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCC--C
Q 041479 670 TRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALP--D 732 (771)
Q Consensus 670 a~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~--~ 732 (771)
++....... .....+||+.|+||| +||++|||++|+.||.+.. ...+..+...... .
T Consensus 180 a~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~--~~~~~~i~~~~~~~~~ 253 (351)
T 3c0i_A 180 AIQLGESGL----VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGTK--ERLFEGIIKGKYKMNP 253 (351)
T ss_dssp CEECCTTSC----BCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSSH--HHHHHHHHHTCCCCCH
T ss_pred eeEecCCCe----eecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCcH--HHHHHHHHcCCCCCCc
Confidence 986654321 123457999999999 6999999999999997531 1122233333332 2
Q ss_pred chhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 733 QILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 733 ~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
.....+++.+.....+||+.||++|||+.|+++
T Consensus 254 ~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 254 RQWSHISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp HHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 223445666666777999999999999999985
No 108
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=6.3e-35 Score=312.33 Aligned_cols=238 Identities=31% Similarity=0.487 Sum_probs=185.9
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccch-hhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQR-GALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALV 601 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv 601 (771)
+.....+|+|.+|+||+|+++. ++.||||++..... .....+.+|++++++++||||+++++++.+.+ ..++|
T Consensus 32 y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-----~~~lv 105 (326)
T 3uim_A 32 FSNKNILGRGGFGKVYKGRLAD-GTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPT-----ERLLV 105 (326)
T ss_dssp SCSTTEEECCSSSEEEEECCSS-SCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEECCSS-----CCEEE
T ss_pred cccceeEecCCCcEEEEEEecC-CCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEecCC-----ceEEE
Confidence 3345568999999999998764 56999999965432 22347899999999999999999999998766 57899
Q ss_pred EEeccCCCCCCC-------cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccC
Q 041479 602 YEFMHHGSLESC-------PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIP 674 (771)
Q Consensus 602 ~e~~~~g~L~~~-------~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~ 674 (771)
|||+++|+|.++ ...+++..+..++.|++.||+|||+.+.++|+||||||+||+++.++.+||+|||+++...
T Consensus 106 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 185 (326)
T 3uim_A 106 YPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMD 185 (326)
T ss_dssp EECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECCCSSCEECC
T ss_pred EEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEeccCccccccC
Confidence 999999999765 2248999999999999999999999766699999999999999999999999999998664
Q ss_pred cccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCcc---ccCCccHHHHHHhhCCC-chh
Q 041479 675 EVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDM---FTEGLDLHNFVKMALPD-QIL 735 (771)
Q Consensus 675 ~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~---~~~~~~~~~~~~~~~~~-~~~ 735 (771)
.... .......||+.|+||| +||++|||++|+.||... ........+|....... ...
T Consensus 186 ~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (326)
T 3uim_A 186 YKDT---HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLE 262 (326)
T ss_dssp SSSS---CEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCST
T ss_pred cccc---cccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhhh
Confidence 3322 1223356999999999 699999999999999632 12334466666554432 222
Q ss_pred hhcC------------ccccccCcccChhchhhcCCHHHHHHHHHH
Q 041479 736 QVLD------------PLFLVGGVQEGEETAEENIKKGQIRESLIA 769 (771)
Q Consensus 736 ~~~~------------~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~ 769 (771)
...+ +.+...+.+||+.||++|||+.||++.|++
T Consensus 263 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~ 308 (326)
T 3uim_A 263 ALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308 (326)
T ss_dssp TSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHT
T ss_pred hhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcC
Confidence 2222 223344559999999999999999999985
No 109
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=3.5e-34 Score=310.67 Aligned_cols=229 Identities=20% Similarity=0.259 Sum_probs=184.5
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRAL 600 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~l 600 (771)
+.....+|+|.+|+||+|+++.+++.||||++.... ....+.+.+|++++++++|||||++++++.+.+ ..|+
T Consensus 31 y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~-----~~~l 105 (362)
T 2bdw_A 31 YDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEES-----FHYL 105 (362)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS-----EEEE
T ss_pred eEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC-----EEEE
Confidence 334556899999999999999999999999997543 345578999999999999999999999998776 7899
Q ss_pred EEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCC---CceEEecccCccccC
Q 041479 601 VYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDND---MTAHMGDFGLTRFIP 674 (771)
Q Consensus 601 v~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~---~~~kl~DfGla~~~~ 674 (771)
||||+++|+|.+. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.+ +.+||+|||+++...
T Consensus 106 v~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~ 182 (362)
T 2bdw_A 106 VFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVN 182 (362)
T ss_dssp EECCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCT
T ss_pred EEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecCcceEec
Confidence 9999999999665 34688999999999999999999996 99999999999999865 459999999998665
Q ss_pred cccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhC--CCchhhh
Q 041479 675 EVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMAL--PDQILQV 737 (771)
Q Consensus 675 ~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~--~~~~~~~ 737 (771)
.... ....+||+.|+||| +||++|||++|+.||.+... ......+..... +......
T Consensus 183 ~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~-~~~~~~i~~~~~~~~~~~~~~ 256 (362)
T 2bdw_A 183 DSEA-----WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ-HRLYAQIKAGAYDYPSPEWDT 256 (362)
T ss_dssp TCCS-----CCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHHTCCCCCTTGGGG
T ss_pred CCcc-----cccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-HHHHHHHHhCCCCCCcccccC
Confidence 3221 22457999999999 69999999999999965321 111222333322 2333345
Q ss_pred cCccccccCcccChhchhhcCCHHHHHH
Q 041479 738 LDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 738 ~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
+++.+.....+||+.||++|||+.++++
T Consensus 257 ~~~~~~~li~~~L~~dP~~R~t~~e~l~ 284 (362)
T 2bdw_A 257 VTPEAKSLIDSMLTVNPKKRITADQALK 284 (362)
T ss_dssp SCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred CCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 6666767777999999999999999875
No 110
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=2.9e-34 Score=298.30 Aligned_cols=235 Identities=22% Similarity=0.264 Sum_probs=189.3
Q ss_pred cccccccccccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCcee
Q 041479 520 RKDLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYF 597 (771)
Q Consensus 520 ~~~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 597 (771)
...+.....+|+|.+|+||+|+++ ++.||||++.... ....+.|.+|+.++++++||||+++++++.+.+.. .
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~---~ 83 (271)
T 3kmu_A 9 FKQLNFLTKLNENHSGELWKGRWQ--GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAP---H 83 (271)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEET--TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSS---S
T ss_pred HHHhHHHHHhcCCCcceEEEEEEC--CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCC---C
Confidence 344555667899999999999985 6689999997553 34557899999999999999999999998776211 6
Q ss_pred EEEEEEeccCCCCCCCc-----ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccc
Q 041479 598 RALVYEFMHHGSLESCP-----RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRF 672 (771)
Q Consensus 598 ~~lv~e~~~~g~L~~~~-----~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~ 672 (771)
.++||||+++|+|.++. ..+++.++..++.|++.||+|||+. .++|+||||||+||+++.++.++++|||++..
T Consensus 84 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~-~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~ 162 (271)
T 3kmu_A 84 PTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTL-EPLIPRHALNSRSVMIDEDMTARISMADVKFS 162 (271)
T ss_dssp CEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTS-SSCCTTCCCSGGGEEECTTSCEEEEGGGSCCT
T ss_pred eEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC-CCceecCCCccceEEEcCCcceeEEeccceee
Confidence 79999999999997761 2489999999999999999999985 12399999999999999999999999998764
Q ss_pred cCcccCCcccccccccccccccchh------------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCch
Q 041479 673 IPEVMSSNQCSSVGLKGTVGYATPE------------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQI 734 (771)
Q Consensus 673 ~~~~~~~~~~~~~~~~gt~~y~aPE------------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~ 734 (771)
... ....||+.|+||| +||++|||++|+.||.+..... ..........+...
T Consensus 163 ~~~---------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-~~~~~~~~~~~~~~ 232 (271)
T 3kmu_A 163 FQS---------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNME-IGMKVALEGLRPTI 232 (271)
T ss_dssp TSC---------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHH-HHHHHHHSCCCCCC
T ss_pred ecc---------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHH-HHHHHHhcCCCCCC
Confidence 221 2246899999999 6999999999999997642211 12333334444455
Q ss_pred hhhcCccccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 735 LQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 735 ~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
+..+++.+.....+||+.||++|||+.++++.|+++
T Consensus 233 ~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l 268 (271)
T 3kmu_A 233 PPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKM 268 (271)
T ss_dssp CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHh
Confidence 566677777777899999999999999999999986
No 111
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=6e-34 Score=316.29 Aligned_cols=229 Identities=19% Similarity=0.199 Sum_probs=184.5
Q ss_pred cccccccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEE
Q 041479 524 LLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALV 601 (771)
Q Consensus 524 ~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv 601 (771)
.....+|+|.+|+||+|+++.+++.||+|++.... ....+.+.+|++++++++|||||++++++.+.+ ..|+|
T Consensus 14 ~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~-----~~~lv 88 (444)
T 3soa_A 14 QLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEG-----HHYLI 88 (444)
T ss_dssp EEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSS-----EEEEE
T ss_pred EEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECC-----EEEEE
Confidence 34456899999999999999999999999996543 344578999999999999999999999998776 78999
Q ss_pred EEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeC---CCCceEEecccCccccCc
Q 041479 602 YEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD---NDMTAHMGDFGLTRFIPE 675 (771)
Q Consensus 602 ~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~---~~~~~kl~DfGla~~~~~ 675 (771)
||||++|+|.+. ...+++.++..++.|++.||+|||+. +|+||||||+|||++ .++.+||+|||+++....
T Consensus 89 ~E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~ 165 (444)
T 3soa_A 89 FDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEG 165 (444)
T ss_dssp ECCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCT
T ss_pred EEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCceeEEecC
Confidence 999999999765 45689999999999999999999996 999999999999998 467899999999986654
Q ss_pred ccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCC--Cchhhhc
Q 041479 676 VMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALP--DQILQVL 738 (771)
Q Consensus 676 ~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 738 (771)
... ...+.+||+.|+||| +||++|||++|+.||.+... ...+..+...... ....+.+
T Consensus 166 ~~~----~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~-~~~~~~i~~~~~~~~~~~~~~~ 240 (444)
T 3soa_A 166 EQQ----AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQ-HRLYQQIKAGAYDFPSPEWDTV 240 (444)
T ss_dssp TCC----BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSH-HHHHHHHHHTCCCCCTTTTTTS
T ss_pred CCc----eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccH-HHHHHHHHhCCCCCCccccccC
Confidence 321 223457999999999 69999999999999965321 1112333333332 3333456
Q ss_pred CccccccCcccChhchhhcCCHHHHHH
Q 041479 739 DPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 739 ~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
++.+.....+||+.||++|||+.|+++
T Consensus 241 s~~~~~li~~~L~~dP~~Rpta~e~L~ 267 (444)
T 3soa_A 241 TPEAKDLINKMLTINPSKRITAAEALK 267 (444)
T ss_dssp CHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred CHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 667777777999999999999999986
No 112
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=4.9e-34 Score=299.70 Aligned_cols=235 Identities=22% Similarity=0.320 Sum_probs=194.8
Q ss_pred cccccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEE
Q 041479 522 DLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALV 601 (771)
Q Consensus 522 ~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv 601 (771)
.+.....+|+|.+|+||+|+++.+++.||||++... ....+.+.+|++++++++||||+++++++.+.+ ..++|
T Consensus 14 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-----~~~~v 87 (288)
T 3kfa_A 14 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREP-----PFYII 87 (288)
T ss_dssp GEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC-STHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-----SEEEE
T ss_pred ceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCC-----CEEEE
Confidence 344456789999999999999999999999999644 335678999999999999999999999987766 67999
Q ss_pred EEeccCCCCCCC-----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcc
Q 041479 602 YEFMHHGSLESC-----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676 (771)
Q Consensus 602 ~e~~~~g~L~~~-----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~ 676 (771)
|||+++|+|.++ ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 88 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~ 164 (288)
T 3kfa_A 88 TEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 164 (288)
T ss_dssp EECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSS
T ss_pred EEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCccceeccCC
Confidence 999999999776 23488999999999999999999997 8999999999999999999999999999876543
Q ss_pred cCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhhhcCc
Q 041479 677 MSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQVLDP 740 (771)
Q Consensus 677 ~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 740 (771)
.. .......||+.|+||| +|+++|||++ |..||.+.. .....+..........+..+++
T Consensus 165 ~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 239 (288)
T 3kfa_A 165 TY---TAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGID--LSQVYELLEKDYRMERPEGCPE 239 (288)
T ss_dssp SS---EEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC--GGGHHHHHHTTCCCCCCTTCCH
T ss_pred cc---ccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHhccCCCCCCCCCCH
Confidence 21 2223445788999999 6999999999 999997642 2234555555554444555666
Q ss_pred cccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 741 LFLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 741 ~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
.+.....+|+..||++|||+.++++.|+++
T Consensus 240 ~l~~li~~~l~~dp~~Rps~~~~~~~l~~~ 269 (288)
T 3kfa_A 240 KVYELMRACWQWNPSDRPSFAEIHQAFETM 269 (288)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCChhhCcCHHHHHHHHHHH
Confidence 777777799999999999999999999875
No 113
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.6e-34 Score=307.83 Aligned_cols=227 Identities=23% Similarity=0.291 Sum_probs=182.6
Q ss_pred cccccccccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeE
Q 041479 522 DLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFR 598 (771)
Q Consensus 522 ~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 598 (771)
.+.....+|+|.+|+||+|++..+++.||||++.... ....+.+.+|+++++.++|||||++++++.+.+ ..
T Consensus 10 ~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~-----~~ 84 (336)
T 3h4j_B 10 PYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPT-----DI 84 (336)
T ss_dssp TEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSS-----EE
T ss_pred CEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC-----EE
Confidence 3445667899999999999999999999999996542 223468899999999999999999999998876 78
Q ss_pred EEEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCc
Q 041479 599 ALVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPE 675 (771)
Q Consensus 599 ~lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~ 675 (771)
++||||+ +|+|.++ ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 85 ~lv~E~~-~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~ 160 (336)
T 3h4j_B 85 VMVIEYA-GGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTD 160 (336)
T ss_dssp EEEECCC-CEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSSCTBTTTT
T ss_pred EEEEECC-CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEeccceeccC
Confidence 9999999 6787665 45689999999999999999999997 899999999999999999999999999986544
Q ss_pred ccCCcccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcC
Q 041479 676 VMSSNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLD 739 (771)
Q Consensus 676 ~~~~~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 739 (771)
... ....+||+.|+||| +||++|||++|+.||.+...... .... . ......++.++
T Consensus 161 ~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~-~~~i-~-~~~~~~p~~~s 232 (336)
T 3h4j_B 161 GNF-----LKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNL-FKKV-N-SCVYVMPDFLS 232 (336)
T ss_dssp SBT-----TCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTC-BCCC-C-SSCCCCCTTSC
T ss_pred Ccc-----cccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHH-HHHH-H-cCCCCCcccCC
Confidence 321 23457999999999 69999999999999976432211 0000 0 01122344456
Q ss_pred ccccccCcccChhchhhcCCHHHHHH
Q 041479 740 PLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 740 ~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
+.+.....+||+.||++|||+.|+++
T Consensus 233 ~~~~~li~~~L~~dP~~Rpt~~eil~ 258 (336)
T 3h4j_B 233 PGAQSLIRRMIVADPMQRITIQEIRR 258 (336)
T ss_dssp HHHHHHHHTTSCSSGGGSCCHHHHTT
T ss_pred HHHHHHHHHHcCCChhHCcCHHHHHh
Confidence 66666777999999999999999974
No 114
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=5.4e-34 Score=311.30 Aligned_cols=229 Identities=17% Similarity=0.173 Sum_probs=185.3
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
+.....+|+|.+|+||+|+++.+++.||+|++..........+.+|++++++++|||||++++++.+.. ..++||
T Consensus 53 y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~-----~~~lv~ 127 (387)
T 1kob_A 53 YDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKY-----EMVLIL 127 (387)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSS-----EEEEEE
T ss_pred eEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCC-----EEEEEE
Confidence 444556899999999999999999999999997665555678999999999999999999999998766 789999
Q ss_pred EeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCC--CCceEEecccCccccCcc
Q 041479 603 EFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN--DMTAHMGDFGLTRFIPEV 676 (771)
Q Consensus 603 e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~--~~~~kl~DfGla~~~~~~ 676 (771)
||+++|+|.++ ...+++.++..++.|++.||+|||+. +|+||||||+||+++. .+.+||+|||+++.....
T Consensus 128 E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~ 204 (387)
T 1kob_A 128 EFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPD 204 (387)
T ss_dssp ECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTT
T ss_pred EcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecccceecCCC
Confidence 99999999765 23689999999999999999999986 9999999999999974 578999999999866443
Q ss_pred cCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhC--CCchhhhcC
Q 041479 677 MSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMAL--PDQILQVLD 739 (771)
Q Consensus 677 ~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 739 (771)
.. ....+||+.|+||| +||++|||++|+.||.+.... ..+..+..... +......++
T Consensus 205 ~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s 278 (387)
T 1kob_A 205 EI-----VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDL-ETLQNVKRCDWEFDEDAFSSVS 278 (387)
T ss_dssp SC-----EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHH-HHHHHHHHCCCCCCSSTTTTSC
T ss_pred cc-----eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHH-HHHHHHHhCCCCCCccccccCC
Confidence 21 12346899999999 699999999999999753211 11222222222 233334556
Q ss_pred ccccccCcccChhchhhcCCHHHHHH
Q 041479 740 PLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 740 ~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
+.+.....+||+.||++|||+.|+++
T Consensus 279 ~~~~~li~~~L~~dP~~Rpt~~ell~ 304 (387)
T 1kob_A 279 PEAKDFIKNLLQKEPRKRLTVHDALE 304 (387)
T ss_dssp HHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHHHcCCChhHCcCHHHHhh
Confidence 66667777999999999999999985
No 115
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=2.9e-34 Score=305.18 Aligned_cols=239 Identities=21% Similarity=0.252 Sum_probs=192.8
Q ss_pred cccccccccccccceEEEEEe-----cCCCeEEEEEEeeccc-hhhHHHHHHHHHHHhcc-CCCCceeEEEEeecCCCCC
Q 041479 522 DLLLNVSYESLVKATVYKGIL-----DLDQTFIAVKVLFLHQ-RGALKSFMAECQALRNI-RHRNLVKIITACSTSDFQG 594 (771)
Q Consensus 522 ~~~~~~~l~~~~~~~Vy~~~~-----~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~ 594 (771)
.+.....+|+|.+|+||+|++ ..+++.||||++.... ....+.+.+|+++++++ +||||+++++++.+.+
T Consensus 24 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~--- 100 (313)
T 1t46_A 24 RLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGG--- 100 (313)
T ss_dssp GEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS---
T ss_pred hhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCC---
Confidence 344456789999999999985 4466799999997553 34567899999999999 8999999999998766
Q ss_pred ceeEEEEEEeccCCCCCCCcc---------------------cCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCC
Q 041479 595 NYFRALVYEFMHHGSLESCPR---------------------ILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSN 653 (771)
Q Consensus 595 ~~~~~lv~e~~~~g~L~~~~~---------------------~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~N 653 (771)
..++||||+++|+|.++.. .+++.++..++.|++.||+|||+. +|+||||||+|
T Consensus 101 --~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~N 175 (313)
T 1t46_A 101 --PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARN 175 (313)
T ss_dssp --SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGG
T ss_pred --CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccce
Confidence 5799999999999976511 388999999999999999999996 99999999999
Q ss_pred eeeCCCCceEEecccCccccCcccCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCcccc
Q 041479 654 VLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFT 717 (771)
Q Consensus 654 ILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~ 717 (771)
|+++.++.+||+|||+++....... ........||+.|+||| +|+++|||++ |+.||.+...
T Consensus 176 il~~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~ 253 (313)
T 1t46_A 176 ILLTHGRITKICDFGLARDIKNDSN--YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPV 253 (313)
T ss_dssp EEEETTTEEEECCCGGGSCTTSCTT--SEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCS
T ss_pred EEEcCCCCEEEcccccccccccccc--ceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccc
Confidence 9999999999999999987654332 11223345788999999 6999999999 9999976432
Q ss_pred CCccHHHHHHhhCCCchhhhcCccccccCcccChhchhhcCCHHHHHHHHHHhC
Q 041479 718 EGLDLHNFVKMALPDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAIL 771 (771)
Q Consensus 718 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~l 771 (771)
............+...+..+++.+.....+||+.||++|||+.|+++.|++++
T Consensus 254 -~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 306 (313)
T 1t46_A 254 -DSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQLIEKQI 306 (313)
T ss_dssp -SHHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred -hhHHHHHhccCCCCCCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence 22344455554444444555666667777999999999999999999999863
No 116
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=4.8e-34 Score=302.79 Aligned_cols=230 Identities=22% Similarity=0.304 Sum_probs=176.8
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
+.....+|+|.+|+||+|++. ++.||||++... ...+.|.+|++++++++|||||++++++.+. .++||
T Consensus 10 ~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-------~~lv~ 78 (307)
T 2eva_A 10 IEVEEVVGRGAFGVVCKAKWR--AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLNP-------VCLVM 78 (307)
T ss_dssp EEEEEEEECCSSSEEEEEEET--TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTTT-------TEEEE
T ss_pred eeeeeEeecCCCceEEEEEEC--CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcCC-------cEEEE
Confidence 444556899999999999885 568999998543 3457899999999999999999999987632 48999
Q ss_pred EeccCCCCCCCc------ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCc-eEEecccCccccCc
Q 041479 603 EFMHHGSLESCP------RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMT-AHMGDFGLTRFIPE 675 (771)
Q Consensus 603 e~~~~g~L~~~~------~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~-~kl~DfGla~~~~~ 675 (771)
||+++|+|.++. ..+++..+..++.|+++||+|||+.+..+|+||||||+||+++.++. +||+|||+++....
T Consensus 79 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~ 158 (307)
T 2eva_A 79 EYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQT 158 (307)
T ss_dssp ECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC------
T ss_pred EcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccccc
Confidence 999999997661 23678889999999999999999854358999999999999988876 79999999975433
Q ss_pred ccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCc
Q 041479 676 VMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDP 740 (771)
Q Consensus 676 ~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 740 (771)
.. ....||+.|+||| +||++|||++|+.||.+.......................+++
T Consensus 159 ~~-------~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (307)
T 2eva_A 159 HM-------TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPK 231 (307)
T ss_dssp -------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCCCCCBTTCCH
T ss_pred cc-------ccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCCCCcccccCH
Confidence 21 1235899999999 7999999999999997643222222222223333334445566
Q ss_pred cccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 741 LFLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 741 ~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
.+.....+||+.||++|||+.++++.|+++
T Consensus 232 ~l~~li~~~l~~dp~~Rps~~ell~~L~~~ 261 (307)
T 2eva_A 232 PIESLMTRCWSKDPSQRPSMEEIVKIMTHL 261 (307)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence 666677799999999999999999999875
No 117
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=8.2e-34 Score=317.12 Aligned_cols=229 Identities=28% Similarity=0.304 Sum_probs=186.7
Q ss_pred cccccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEE
Q 041479 522 DLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALV 601 (771)
Q Consensus 522 ~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv 601 (771)
.+.....+|+|.+|+||+|.+. ++.||||+++... ..++|.+|++++++++|||||++++++.+... ..|+|
T Consensus 194 ~~~~~~~lG~G~fg~V~~~~~~--~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~----~~~iv 265 (450)
T 1k9a_A 194 ELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG----GLYIV 265 (450)
T ss_dssp GEEEEEEEEECSSEEEEEEEET--TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTS----CEEEE
T ss_pred HeEEEeeecCcCCeeEEEEEec--CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCC----ceEEE
Confidence 3444567899999999999886 5699999996543 45789999999999999999999999876541 47999
Q ss_pred EEeccCCCCCCCc-----ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcc
Q 041479 602 YEFMHHGSLESCP-----RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676 (771)
Q Consensus 602 ~e~~~~g~L~~~~-----~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~ 676 (771)
||||++|+|.++. ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++.....
T Consensus 266 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 342 (450)
T 1k9a_A 266 TEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST 342 (450)
T ss_dssp EECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCTTCEECC--
T ss_pred EEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCCCccccccc
Confidence 9999999998762 2368899999999999999999996 8999999999999999999999999999854321
Q ss_pred cCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhhhcCc
Q 041479 677 MSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQVLDP 740 (771)
Q Consensus 677 ~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 740 (771)
. ....+++.|+||| |||++|||+| |+.||.+.... .....+....+...+..+++
T Consensus 343 ~-------~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~--~~~~~i~~~~~~~~p~~~~~ 413 (450)
T 1k9a_A 343 Q-------DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLK--DVVPRVEKGYKMDAPDGCPP 413 (450)
T ss_dssp -----------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTT--THHHHHHTTCCCCCCTTCCH
T ss_pred c-------cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCCCCCCCCcCCH
Confidence 1 1225788999999 7999999999 99999765332 34444444444445556677
Q ss_pred cccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 741 LFLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 741 ~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
.+...+.+||+.||++|||+.++++.|+++
T Consensus 414 ~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i 443 (450)
T 1k9a_A 414 AVYDVMKNCWHLDAATRPTFLQLREQLEHI 443 (450)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 777778899999999999999999999876
No 118
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=3.7e-34 Score=299.57 Aligned_cols=235 Identities=20% Similarity=0.280 Sum_probs=177.7
Q ss_pred ccccccccccccceEEEEEecCC---CeEEEEEEeecc-chhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeE
Q 041479 523 LLLNVSYESLVKATVYKGILDLD---QTFIAVKVLFLH-QRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFR 598 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~---~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 598 (771)
+.....+|+|.+|+||+|++..+ +..||||++... .....+.+.+|+.++++++||||+++++++.+. ..
T Consensus 17 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~------~~ 90 (281)
T 1mp8_A 17 IELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITEN------PV 90 (281)
T ss_dssp EEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSS------SC
T ss_pred eEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEccC------cc
Confidence 44456689999999999998653 457999998654 334567899999999999999999999997543 46
Q ss_pred EEEEEeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccC
Q 041479 599 ALVYEFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIP 674 (771)
Q Consensus 599 ~lv~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~ 674 (771)
|+||||+++|+|.++ ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~ 167 (281)
T 1mp8_A 91 WIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 167 (281)
T ss_dssp EEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC--------
T ss_pred EEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECccccccccC
Confidence 899999999999776 23588999999999999999999996 99999999999999999999999999998764
Q ss_pred cccCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhhhc
Q 041479 675 EVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQVL 738 (771)
Q Consensus 675 ~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 738 (771)
.... .......+|+.|+||| +|+++||+++ |+.||.+.... ..........+...+..+
T Consensus 168 ~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~--~~~~~i~~~~~~~~~~~~ 242 (281)
T 1mp8_A 168 DSTY---YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNN--DVIGRIENGERLPMPPNC 242 (281)
T ss_dssp --------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGG--GHHHHHHTTCCCCCCTTC
T ss_pred cccc---cccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHH--HHHHHHHcCCCCCCCCCC
Confidence 4321 1122335788999999 6999999997 99999764322 233333333333344556
Q ss_pred CccccccCcccChhchhhcCCHHHHHHHHHHhC
Q 041479 739 DPLFLVGGVQEGEETAEENIKKGQIRESLIAIL 771 (771)
Q Consensus 739 ~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~l 771 (771)
++.+.....+||+.||++|||+.++++.|++++
T Consensus 243 ~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 275 (281)
T 1mp8_A 243 PPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 275 (281)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 666767777999999999999999999999863
No 119
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=4.9e-34 Score=311.67 Aligned_cols=227 Identities=22% Similarity=0.217 Sum_probs=179.7
Q ss_pred ccccccccccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhcc-CCCCceeEEEEeecCCCCCce
Q 041479 521 KDLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNI-RHRNLVKIITACSTSDFQGNY 596 (771)
Q Consensus 521 ~~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~ 596 (771)
.++.....+|+|.+|+||+|+++.+++.||||++.... ....+.+.+|..++.++ +|||||++++++.+.+
T Consensus 52 ~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~----- 126 (396)
T 4dc2_A 52 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTES----- 126 (396)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSS-----
T ss_pred hHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECC-----
Confidence 44555667999999999999999999999999997543 23345688999999887 8999999999998776
Q ss_pred eEEEEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCcccc
Q 041479 597 FRALVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673 (771)
Q Consensus 597 ~~~lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~ 673 (771)
..|+|||||++|+|..+ ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+|+..
T Consensus 127 ~~~lV~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFGla~~~ 203 (396)
T 4dc2_A 127 RLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG 203 (396)
T ss_dssp EEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEEEEEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecceeeec
Confidence 78999999999999766 35689999999999999999999996 9999999999999999999999999999853
Q ss_pred CcccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCC------cc-HHHHHHhhCC
Q 041479 674 PEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEG------LD-LHNFVKMALP 731 (771)
Q Consensus 674 ~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~------~~-~~~~~~~~~~ 731 (771)
.... ......+||+.|+||| +||++|||++|+.||....... .. +.+.. ...+
T Consensus 204 ~~~~----~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i-~~~~ 278 (396)
T 4dc2_A 204 LRPG----DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI-LEKQ 278 (396)
T ss_dssp CCTT----CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHH-HHCC
T ss_pred ccCC----CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHH-hccc
Confidence 2221 1233467999999999 6999999999999996421110 01 11111 1222
Q ss_pred CchhhhcCccccccCcccChhchhhcCCH
Q 041479 732 DQILQVLDPLFLVGGVQEGEETAEENIKK 760 (771)
Q Consensus 732 ~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~ 760 (771)
...+..+++.+.....+||+.||++||++
T Consensus 279 ~~~p~~~s~~~~~li~~lL~~dP~~R~~~ 307 (396)
T 4dc2_A 279 IRIPRSLSVKAASVLKSFLNKDPKERLGC 307 (396)
T ss_dssp CCCCTTSCHHHHHHHHHHTCSCTTTSTTC
T ss_pred cCCCCcCCHHHHHHHHHHhcCCHhHcCCC
Confidence 33444566666677779999999999996
No 120
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=1.2e-33 Score=294.76 Aligned_cols=232 Identities=19% Similarity=0.205 Sum_probs=189.1
Q ss_pred cccccccccccceEEEEEecCCCeEEEEEEeeccc-hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEE
Q 041479 524 LLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 524 ~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
.....+|+|.+|+||+|+++.+++.||||++.... ....+.+.+|+++++.++||||+++++++.+.+ ..|+||
T Consensus 10 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~lv~ 84 (276)
T 2yex_A 10 DLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGN-----IQYLFL 84 (276)
T ss_dssp EEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT-----EEEEEE
T ss_pred EEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCC-----EEEEEE
Confidence 34456899999999999999888899999997553 345678999999999999999999999998776 789999
Q ss_pred EeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCC
Q 041479 603 EFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSS 679 (771)
Q Consensus 603 e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 679 (771)
||+++|+|.++ ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 85 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~- 160 (276)
T 2yex_A 85 EYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR- 160 (276)
T ss_dssp ECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEECEETTE-
T ss_pred EecCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCCCccccCCCcc-
Confidence 99999999877 33588999999999999999999986 999999999999999999999999999986543221
Q ss_pred cccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCcccc
Q 041479 680 NQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFL 743 (771)
Q Consensus 680 ~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 743 (771)
........||+.|+||| +|+++|||++|+.||.........+..+............+++.+.
T Consensus 161 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (276)
T 2yex_A 161 -ERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPL 239 (276)
T ss_dssp -ECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTTSTTGGGSCHHHH
T ss_pred -hhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccccCchhhcCHHHH
Confidence 11123456899999999 6999999999999997654433344445443333333345566666
Q ss_pred ccCcccChhchhhcCCHHHHHH
Q 041479 744 VGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 744 ~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
....+||+.||++|||+.|+++
T Consensus 240 ~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 240 ALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp HHHHHHSCSSTTTSCCHHHHTT
T ss_pred HHHHHHCCCCchhCCCHHHHhc
Confidence 6777999999999999999975
No 121
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=4.8e-34 Score=305.64 Aligned_cols=243 Identities=19% Similarity=0.160 Sum_probs=192.5
Q ss_pred cccccccccccccceEEEEE----ecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCcee
Q 041479 522 DLLLNVSYESLVKATVYKGI----LDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYF 597 (771)
Q Consensus 522 ~~~~~~~l~~~~~~~Vy~~~----~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 597 (771)
.+.....+|+|.+|+||+|+ ...+++.||||++........+.+.+|++++++++||||+++++++...+. ..
T Consensus 24 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~---~~ 100 (327)
T 3lxl_A 24 HLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGR---QS 100 (327)
T ss_dssp GEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSS---CE
T ss_pred hhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCC---ce
Confidence 34456679999999999999 456788999999987766667889999999999999999999999875432 26
Q ss_pred EEEEEEeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCcccc
Q 041479 598 RALVYEFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673 (771)
Q Consensus 598 ~~lv~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~ 673 (771)
.++||||+++|+|.++ ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 101 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~ 177 (327)
T 3lxl_A 101 LRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFGLAKLL 177 (327)
T ss_dssp EEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGGGCEEC
T ss_pred EEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEcccccceec
Confidence 7999999999999876 34589999999999999999999986 9999999999999999999999999999876
Q ss_pred CcccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccC----------C---ccHHHH
Q 041479 674 PEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTE----------G---LDLHNF 725 (771)
Q Consensus 674 ~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~----------~---~~~~~~ 725 (771)
...... ........||+.|+||| +|+++|||++|+.||...... . ....+.
T Consensus 178 ~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (327)
T 3lxl_A 178 PLDKDY-YVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLEL 256 (327)
T ss_dssp CTTCSE-EECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHH
T ss_pred ccCCcc-ceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHH
Confidence 543221 11223346889999999 699999999999998542110 0 112222
Q ss_pred HHhhCCCchhhhcCccccccCcccChhchhhcCCHHHHHHHHHHhC
Q 041479 726 VKMALPDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAIL 771 (771)
Q Consensus 726 ~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~l 771 (771)
.....+...+..+++.+.....+||+.||++|||+.++++.|++++
T Consensus 257 ~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~ 302 (327)
T 3lxl_A 257 LEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLW 302 (327)
T ss_dssp HHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC-
T ss_pred hhcccCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 2233333344555666667777999999999999999999998763
No 122
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=7.2e-34 Score=300.01 Aligned_cols=239 Identities=23% Similarity=0.311 Sum_probs=184.3
Q ss_pred cccccccccccceEEEEEecCCC---eEEEEEEeecc-chhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEE
Q 041479 524 LLNVSYESLVKATVYKGILDLDQ---TFIAVKVLFLH-QRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRA 599 (771)
Q Consensus 524 ~~~~~l~~~~~~~Vy~~~~~~~~---~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 599 (771)
.....+|+|.+|+||+|++..++ ..||||.+... .....+.+.+|+.++++++||||+++++++.+.+. ..+
T Consensus 28 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~----~~~ 103 (298)
T 3f66_A 28 HFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEG----SPL 103 (298)
T ss_dssp EEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSS----CCE
T ss_pred hhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCC----ceE
Confidence 34456899999999999975433 46899998653 34456789999999999999999999999765432 568
Q ss_pred EEEEeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCc
Q 041479 600 LVYEFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPE 675 (771)
Q Consensus 600 lv~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~ 675 (771)
+||||+++|+|.++ ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 104 ~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~ 180 (298)
T 3f66_A 104 VVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFGLARDMYD 180 (298)
T ss_dssp EEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCGGGCCCSC
T ss_pred EEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECcccccccccc
Confidence 99999999999776 34578999999999999999999986 999999999999999999999999999987655
Q ss_pred ccCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhhhcC
Q 041479 676 VMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQVLD 739 (771)
Q Consensus 676 ~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 739 (771)
..........+..||+.|+||| +|+++||+++ |..||.+... ...............+..++
T Consensus 181 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 258 (298)
T 3f66_A 181 KEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNT--FDITVYLLQGRRLLQPEYCP 258 (298)
T ss_dssp GGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCT--TTHHHHHHTTCCCCCCTTCC
T ss_pred cchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCH--HHHHHHHhcCCCCCCCccCC
Confidence 4332233344556889999999 6999999999 5556654322 22333333333333344455
Q ss_pred ccccccCcccChhchhhcCCHHHHHHHHHHhC
Q 041479 740 PLFLVGGVQEGEETAEENIKKGQIRESLIAIL 771 (771)
Q Consensus 740 ~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~l 771 (771)
+.+.....+||+.||++|||+.|+++.|++++
T Consensus 259 ~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~ 290 (298)
T 3f66_A 259 DPLYEVMLKCWHPKAEMRPSFSELVSRISAIF 290 (298)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 66666777999999999999999999999863
No 123
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=8.1e-34 Score=304.83 Aligned_cols=238 Identities=22% Similarity=0.300 Sum_probs=188.8
Q ss_pred cccccccccccccceEEEEEec-------CCCeEEEEEEeeccc-hhhHHHHHHHHHHHhcc-CCCCceeEEEEeecCCC
Q 041479 522 DLLLNVSYESLVKATVYKGILD-------LDQTFIAVKVLFLHQ-RGALKSFMAECQALRNI-RHRNLVKIITACSTSDF 592 (771)
Q Consensus 522 ~~~~~~~l~~~~~~~Vy~~~~~-------~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~ 592 (771)
.+.....+|+|.+|+||+|++. .+++.||||++.... ....+++.+|+++++++ +||||+++++++.+.+
T Consensus 36 ~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~- 114 (334)
T 2pvf_A 36 KLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG- 114 (334)
T ss_dssp GEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-
T ss_pred HeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCC-
Confidence 3445567899999999999975 345689999996543 34567899999999999 8999999999997766
Q ss_pred CCceeEEEEEEeccCCCCCCCc-------------------ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCC
Q 041479 593 QGNYFRALVYEFMHHGSLESCP-------------------RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSN 653 (771)
Q Consensus 593 ~~~~~~~lv~e~~~~g~L~~~~-------------------~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~N 653 (771)
..|+||||+++|+|.++. ..+++.++..++.|++.||+|||+. +|+||||||+|
T Consensus 115 ----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~N 187 (334)
T 2pvf_A 115 ----PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARN 187 (334)
T ss_dssp ----CCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGG
T ss_pred ----ceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccce
Confidence 679999999999997651 1378899999999999999999996 99999999999
Q ss_pred eeeCCCCceEEecccCccccCcccCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCcccc
Q 041479 654 VLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFT 717 (771)
Q Consensus 654 ILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~ 717 (771)
|+++.++.+||+|||+++....... ........||+.|+||| +||++|||++ |+.||.+...
T Consensus 188 Ill~~~~~~kL~Dfg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~ 265 (334)
T 2pvf_A 188 VLVTENNVMKIADFGLARDINNIDY--YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV 265 (334)
T ss_dssp EEECTTCCEEECCCTTCEECTTTSS--EECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCH
T ss_pred EEEcCCCCEEEcccccccccccccc--ccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCH
Confidence 9999999999999999986654322 11223345788999999 6999999999 9999975421
Q ss_pred CCccHHHHHHhhCCCchhhhcCccccccCcccChhchhhcCCHHHHHHHHHHhC
Q 041479 718 EGLDLHNFVKMALPDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAIL 771 (771)
Q Consensus 718 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~l 771 (771)
..+............+..+++.+.....+||+.||++|||+.|+++.|++++
T Consensus 266 --~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~l~ 317 (334)
T 2pvf_A 266 --EELFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIL 317 (334)
T ss_dssp --HHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred --HHHHHHHhcCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 2233334444333444455666666777999999999999999999999863
No 124
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=2.8e-34 Score=306.00 Aligned_cols=244 Identities=18% Similarity=0.174 Sum_probs=190.8
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
+.....+|+|.+|+||+++...+++.||||++........+.+.+|++++++++||||+++++++.... ......++||
T Consensus 31 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~~~~~lv~ 109 (317)
T 2buj_A 31 YLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRER-GAKHEAWLLL 109 (317)
T ss_dssp EEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEE-TTEEEEEEEE
T ss_pred EEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEecc-CCCceeEEEE
Confidence 334556899999999999998888999999997766667788999999999999999999999986421 1223679999
Q ss_pred EeccCCCCCCC-------cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCc
Q 041479 603 EFMHHGSLESC-------PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPE 675 (771)
Q Consensus 603 e~~~~g~L~~~-------~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~ 675 (771)
||+++|+|.++ ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 110 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~ 186 (317)
T 2buj_A 110 PFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLGSMNQACI 186 (317)
T ss_dssp ECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCSSCEESCE
T ss_pred EeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecCcchhccc
Confidence 99999999765 24589999999999999999999996 999999999999999999999999999876532
Q ss_pred ccCCc-----ccccccccccccccchh------------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCC
Q 041479 676 VMSSN-----QCSSVGLKGTVGYATPE------------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPD 732 (771)
Q Consensus 676 ~~~~~-----~~~~~~~~gt~~y~aPE------------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~ 732 (771)
..... ........||+.|+||| +||++|||++|+.||....................
T Consensus 187 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~ 266 (317)
T 2buj_A 187 HVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQNQLSI 266 (317)
T ss_dssp EEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHHCC--C
T ss_pred ccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhhccCCC
Confidence 21110 00112345799999999 69999999999999975443333444444433333
Q ss_pred chhhhcCccccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 733 QILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 733 ~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
.....+++.+.....+||+.||++|||+.++++.|+++
T Consensus 267 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~ 304 (317)
T 2buj_A 267 PQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEAL 304 (317)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHT
T ss_pred CccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhc
Confidence 33344556666677799999999999999999999875
No 125
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=3.6e-34 Score=320.21 Aligned_cols=233 Identities=25% Similarity=0.340 Sum_probs=183.1
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
+.....+|+|.+|+||+|+++.+ ..||||++.... ...++|.+|++++++++|||||++++++.+. ..|+||
T Consensus 186 ~~~~~~lG~G~fg~Vy~~~~~~~-~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~------~~~iv~ 257 (452)
T 1fmk_A 186 LRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE------PIYIVT 257 (452)
T ss_dssp EEEEEEEEECSSCEEEEEEETTT-EEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSS------SCEEEE
T ss_pred ceeeeeecCCCCeEEEEEEECCC-ceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcCC------ceEEEe
Confidence 44455689999999999999865 479999997543 2357899999999999999999999998653 468999
Q ss_pred EeccCCCCCCCc-----ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCccc
Q 041479 603 EFMHHGSLESCP-----RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVM 677 (771)
Q Consensus 603 e~~~~g~L~~~~-----~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~ 677 (771)
|||++|+|.++. ..+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 258 e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 334 (452)
T 1fmk_A 258 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 334 (452)
T ss_dssp CCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCCTTC------
T ss_pred hhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCccceecCCCc
Confidence 999999998772 3488999999999999999999996 89999999999999999999999999998664322
Q ss_pred CCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhhhcCcc
Q 041479 678 SSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPL 741 (771)
Q Consensus 678 ~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 741 (771)
. ....+..+++.|+||| |||++|||++ |+.||.+... ....+.+....+...+..+++.
T Consensus 335 ~---~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~--~~~~~~i~~~~~~~~~~~~~~~ 409 (452)
T 1fmk_A 335 Y---TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--REVLDQVERGYRMPCPPECPES 409 (452)
T ss_dssp -----------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH--HHHHHHHHTTCCCCCCTTSCHH
T ss_pred e---ecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCH--HHHHHHHHcCCCCCCCCCCCHH
Confidence 1 1223345788999999 7999999999 9999976422 1233333444333344455666
Q ss_pred ccccCcccChhchhhcCCHHHHHHHHHHhC
Q 041479 742 FLVGGVQEGEETAEENIKKGQIRESLIAIL 771 (771)
Q Consensus 742 ~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~l 771 (771)
+...+.+||+.||++|||+.++++.|++++
T Consensus 410 l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~ 439 (452)
T 1fmk_A 410 LHDLMCQCWRKEPEERPTFEYLQAFLEDYF 439 (452)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHTTT
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence 667777999999999999999999999863
No 126
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=4.4e-34 Score=308.21 Aligned_cols=223 Identities=19% Similarity=0.215 Sum_probs=181.3
Q ss_pred ccccccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEE
Q 041479 525 LNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALV 601 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv 601 (771)
....+|+|.+|+||+|+...+++.||||++.... ....+++.+|++++++++|||||++++++.+.+ ..++|
T Consensus 58 ~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~-----~~~lv 132 (348)
T 1u5q_A 58 DLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREH-----TAWLV 132 (348)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT-----EEEEE
T ss_pred eeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECC-----eEEEE
Confidence 3456899999999999999899999999996542 334568999999999999999999999998776 78999
Q ss_pred EEeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCccc
Q 041479 602 YEFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVM 677 (771)
Q Consensus 602 ~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~ 677 (771)
|||+. |++.+. ...+++.++..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 133 ~e~~~-g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~- 207 (348)
T 1u5q_A 133 MEYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA- 207 (348)
T ss_dssp EECCS-EEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB-
T ss_pred EecCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeeccCceecCCC-
Confidence 99997 566443 45689999999999999999999996 8999999999999999999999999999865432
Q ss_pred CCcccccccccccccccchh------------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcC
Q 041479 678 SSNQCSSVGLKGTVGYATPE------------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLD 739 (771)
Q Consensus 678 ~~~~~~~~~~~gt~~y~aPE------------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 739 (771)
...+||+.|+||| +||++|||++|+.||.+..... .+........+......++
T Consensus 208 -------~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 279 (348)
T 1u5q_A 208 -------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS-ALYHIAQNESPALQSGHWS 279 (348)
T ss_dssp -------CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHHSCCCCCCCTTSC
T ss_pred -------CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHhcCCCCCCCCCCC
Confidence 2346999999999 6999999999999996532211 1233333333333344456
Q ss_pred ccccccCcccChhchhhcCCHHHHHH
Q 041479 740 PLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 740 ~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
+.+.....+||+.||++|||+.++++
T Consensus 280 ~~l~~li~~~l~~dP~~Rps~~~ll~ 305 (348)
T 1u5q_A 280 EYFRNFVDSCLQKIPQDRPTSEVLLK 305 (348)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHHHHHHHHcccChhhCcCHHHHhh
Confidence 66666777999999999999999975
No 127
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=7.5e-34 Score=299.77 Aligned_cols=238 Identities=21% Similarity=0.242 Sum_probs=189.0
Q ss_pred cccccccccceEEEEEecCCCe---EEEEEEeeccc-hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEE
Q 041479 526 NVSYESLVKATVYKGILDLDQT---FIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALV 601 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~---~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv 601 (771)
...+|+|.+|+||+|++..+++ .||||++.... ....+.+.+|++++++++||||+++++++.+.+. ..++|
T Consensus 26 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~----~~~~v 101 (298)
T 3pls_A 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEG----LPHVL 101 (298)
T ss_dssp EEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSS----CCEEE
T ss_pred CceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCC----CcEEE
Confidence 3568999999999999765543 79999996543 3456789999999999999999999999876542 34899
Q ss_pred EEeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCccc
Q 041479 602 YEFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVM 677 (771)
Q Consensus 602 ~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~ 677 (771)
|||+.+|+|.++ ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 102 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 178 (298)
T 3pls_A 102 LPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDRE 178 (298)
T ss_dssp ECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGG
T ss_pred EecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCCCcccccCCc
Confidence 999999999776 34578899999999999999999996 89999999999999999999999999998665433
Q ss_pred CCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCccc
Q 041479 678 SSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLF 742 (771)
Q Consensus 678 ~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 742 (771)
...........||+.|+||| +|+++|||++|..|+.... .............+...+..+++.+
T Consensus 179 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l 257 (298)
T 3pls_A 179 YYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHI-DPFDLTHFLAQGRRLPQPEYCPDSL 257 (298)
T ss_dssp GGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTS-CGGGHHHHHHTTCCCCCCTTCCHHH
T ss_pred ccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccC-CHHHHHHHhhcCCCCCCCccchHHH
Confidence 22222333456899999999 6999999999655543322 2233445554444444455566667
Q ss_pred cccCcccChhchhhcCCHHHHHHHHHHhC
Q 041479 743 LVGGVQEGEETAEENIKKGQIRESLIAIL 771 (771)
Q Consensus 743 ~~~~~~cl~~~p~~Rpt~~~vl~~L~~~l 771 (771)
.....+||+.||++|||+.++++.|++++
T Consensus 258 ~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 286 (298)
T 3pls_A 258 YQVMQQCWEADPAVRPTFRVLVGEVEQIV 286 (298)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 67777999999999999999999999863
No 128
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=8.4e-34 Score=304.11 Aligned_cols=236 Identities=20% Similarity=0.242 Sum_probs=177.8
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccc-hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCC---------
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDF--------- 592 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~--------- 592 (771)
+.....+|+|.+|+||+|+++.+++.||||++.... ....+.+.+|++++++++|||||++++++.+...
T Consensus 8 y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~ 87 (332)
T 3qd2_B 8 FEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMDE 87 (332)
T ss_dssp EEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHHC
T ss_pred CceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhhh
Confidence 334456899999999999999888899999997543 3456889999999999999999999999865431
Q ss_pred -------------------------------------------CCceeEEEEEEeccCCCCCCC------cccCCHHHHH
Q 041479 593 -------------------------------------------QGNYFRALVYEFMHHGSLESC------PRILSFLRRL 623 (771)
Q Consensus 593 -------------------------------------------~~~~~~~lv~e~~~~g~L~~~------~~~l~~~~~~ 623 (771)
....+.++|||||++|+|.++ ....++..+.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~ 167 (332)
T 3qd2_B 88 IWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCL 167 (332)
T ss_dssp --------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHHHH
T ss_pred hhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHHHH
Confidence 111247999999999999766 2335666789
Q ss_pred HHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCc--------ccccccccccccccc
Q 041479 624 NIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSN--------QCSSVGLKGTVGYAT 695 (771)
Q Consensus 624 ~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~--------~~~~~~~~gt~~y~a 695 (771)
.++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......... .......+||+.|+|
T Consensus 168 ~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~a 244 (332)
T 3qd2_B 168 HIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMS 244 (332)
T ss_dssp HHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGGSC
T ss_pred HHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCccC
Confidence 9999999999999986 99999999999999999999999999998765432111 112234579999999
Q ss_pred hh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCccccccCcccChhchhhcCCH
Q 041479 696 PE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFLVGGVQEGEETAEENIKK 760 (771)
Q Consensus 696 PE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~ 760 (771)
|| +||++|||++|..|+.+.. ........... +.......+.+.....+||+.||++|||+
T Consensus 245 PE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~~---~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rps~ 320 (332)
T 3qd2_B 245 PEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERV---RIITDVRNLKF-PLLFTQKYPQEHMMVQDMLSPSPTERPEA 320 (332)
T ss_dssp HHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHHH---HHHHHHHTTCC-CHHHHHHCHHHHHHHHHHHCSSGGGSCCH
T ss_pred hHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHHH---HHHHHhhccCC-CcccccCChhHHHHHHHHccCCCCcCCCH
Confidence 99 6999999999987754311 11111222222 22233334455556679999999999999
Q ss_pred HHHHH
Q 041479 761 GQIRE 765 (771)
Q Consensus 761 ~~vl~ 765 (771)
.|+++
T Consensus 321 ~~~l~ 325 (332)
T 3qd2_B 321 TDIIE 325 (332)
T ss_dssp HHHHH
T ss_pred HHHhh
Confidence 99986
No 129
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=4.4e-34 Score=308.51 Aligned_cols=228 Identities=22% Similarity=0.227 Sum_probs=168.4
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
+.....+|+|.+|+||+|+++.+++.||||++.... ..+.+.+|++++++++||||+++++++.+.+ ..++||
T Consensus 55 y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-----~~~lv~ 127 (349)
T 2w4o_A 55 FEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPT-----EISLVL 127 (349)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSS-----EEEEEE
T ss_pred EEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCC-----eEEEEE
Confidence 334556899999999999999988899999996543 3467889999999999999999999998776 789999
Q ss_pred EeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCC---CCceEEecccCccccCcc
Q 041479 603 EFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN---DMTAHMGDFGLTRFIPEV 676 (771)
Q Consensus 603 e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~---~~~~kl~DfGla~~~~~~ 676 (771)
||+++|+|.++ ...+++.++..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||+++.....
T Consensus 128 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~ 204 (349)
T 2w4o_A 128 ELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQ 204 (349)
T ss_dssp CCCCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC--------
T ss_pred EeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCccccccCcc
Confidence 99999999765 34588999999999999999999986 8999999999999975 889999999999865432
Q ss_pred cCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCC--CchhhhcC
Q 041479 677 MSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALP--DQILQVLD 739 (771)
Q Consensus 677 ~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 739 (771)
. .....+||+.|+||| +||++|||++|+.||.+.......+..+...... ......++
T Consensus 205 ~-----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 279 (349)
T 2w4o_A 205 V-----LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVS 279 (349)
T ss_dssp -------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCCCCTTTTTTSC
T ss_pred c-----ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCccCCchhhhCC
Confidence 2 122356999999999 6999999999999997543222223333333222 22234455
Q ss_pred ccccccCcccChhchhhcCCHHHHHH
Q 041479 740 PLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 740 ~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
..+.....+||+.||++|||+.|+++
T Consensus 280 ~~~~~li~~~L~~dP~~Rpt~~e~l~ 305 (349)
T 2w4o_A 280 LNAKDLVRKLIVLDPKKRLTTFQALQ 305 (349)
T ss_dssp HHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHHccCChhhCcCHHHHhc
Confidence 56666677999999999999999986
No 130
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=1.2e-33 Score=300.62 Aligned_cols=226 Identities=22% Similarity=0.288 Sum_probs=184.3
Q ss_pred cccccccccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeE
Q 041479 522 DLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFR 598 (771)
Q Consensus 522 ~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 598 (771)
++.....+|+|.+|+||+|+.+.+++.||||++.... ....+.+.+|+.+++.++|||||++++++.+.+ ..
T Consensus 7 ~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~-----~~ 81 (318)
T 1fot_A 7 DFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQ-----QI 81 (318)
T ss_dssp GEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSS-----EE
T ss_pred HcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCC-----EE
Confidence 4445567899999999999999999999999997542 234678889999999999999999999998776 78
Q ss_pred EEEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCc
Q 041479 599 ALVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPE 675 (771)
Q Consensus 599 ~lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~ 675 (771)
|+||||+++|+|.++ ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 82 ~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~ 158 (318)
T 1fot_A 82 FMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAKYVPD 158 (318)
T ss_dssp EEEECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCSSCEECSS
T ss_pred EEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecCcceecCC
Confidence 999999999999876 34688999999999999999999985 999999999999999999999999999986543
Q ss_pred ccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCc
Q 041479 676 VMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDP 740 (771)
Q Consensus 676 ~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 740 (771)
. ....+||+.|+||| +||++|||++|+.||.+.... .....+..... ..+..+++
T Consensus 159 ~-------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~-~~~~~i~~~~~--~~p~~~~~ 228 (318)
T 1fot_A 159 V-------TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTM-KTYEKILNAEL--RFPPFFNE 228 (318)
T ss_dssp C-------BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHH-HHHHHHHHCCC--CCCTTSCH
T ss_pred c-------cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH-HHHHHHHhCCC--CCCCCCCH
Confidence 2 12357999999999 699999999999999653211 11222322222 23344566
Q ss_pred cccccCcccChhchhhcC-----CHHHHHH
Q 041479 741 LFLVGGVQEGEETAEENI-----KKGQIRE 765 (771)
Q Consensus 741 ~~~~~~~~cl~~~p~~Rp-----t~~~vl~ 765 (771)
.+.....+|+..||++|| ++.|+++
T Consensus 229 ~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 229 DVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp HHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred HHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 666677799999999999 8888874
No 131
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=5.2e-33 Score=298.03 Aligned_cols=249 Identities=18% Similarity=0.266 Sum_probs=159.6
Q ss_pred EEEEEcCCCCCcccCCccccCCCCCcEEEcCCCcccccCCccccCCCCCCEEecccCcCcccCCcccccCCcccccCCcc
Q 041479 46 VILLNLSGQNLTGTASPYIGNLTFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNALQGQIPDSRLILNKLEGNIPSE 125 (771)
Q Consensus 46 l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~l~~n~l~~~~p~~ 125 (771)
++.++++++.++ .+|..+. ++|+.|+|++|+|++..+..|+++++|++|+|++|+++ +..|..
T Consensus 33 l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~--------------~~~~~~ 95 (330)
T 1xku_A 33 LRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKIS--------------KISPGA 95 (330)
T ss_dssp TTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCC--------------CBCTTT
T ss_pred CeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCC--------------eeCHHH
Confidence 345666677777 4455443 68899999999999877778999999999999999865 345677
Q ss_pred ccCCCCCCEEecccccCcCCCCccceeeecccccccccCccccCCCCCCEEecccCcCcccCChhhhhCCCCCcEEEeec
Q 041479 126 LGSLLKFKGLGLANNYFTGPIPHLNMFQVSVYSLTGSIPIQLLNITSMEYFHVSENQLVGELPPHIGFTLPNVRILLLAG 205 (771)
Q Consensus 126 ~~~l~~L~~L~Ls~N~l~~~lp~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~ 205 (771)
|+++++|++|++++|+++ .+|..+. ++|++|++++|+++ .++...+..+++|+.|++++
T Consensus 96 ~~~l~~L~~L~Ls~n~l~------------------~l~~~~~--~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~ 154 (330)
T 1xku_A 96 FAPLVKLERLYLSKNQLK------------------ELPEKMP--KTLQELRVHENEIT-KVRKSVFNGLNQMIVVELGT 154 (330)
T ss_dssp TTTCTTCCEEECCSSCCS------------------BCCSSCC--TTCCEEECCSSCCC-BBCHHHHTTCTTCCEEECCS
T ss_pred hcCCCCCCEEECCCCcCC------------------ccChhhc--ccccEEECCCCccc-ccCHhHhcCCccccEEECCC
Confidence 778888888888888776 2333332 56777777777776 45555444667777777777
Q ss_pred Ccccc--cCCccccCCCCCCEEEccccccCCCCCcCcccccCCCCCcEEEccCccccccCChhhhhcccccceeecccCc
Q 041479 206 NQFFG--NIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSLSGTLPNSLANFSSHLRYLYMSANP 283 (771)
Q Consensus 206 N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~ 283 (771)
|++.. ..+..|.++++|++|++++|.++.+ |..+. ++|++|++++|+
T Consensus 155 n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~l----------------------------~~~~~---~~L~~L~l~~n~ 203 (330)
T 1xku_A 155 NPLKSSGIENGAFQGMKKLSYIRIADTNITTI----------------------------PQGLP---PSLTELHLDGNK 203 (330)
T ss_dssp SCCCGGGBCTTGGGGCTTCCEEECCSSCCCSC----------------------------CSSCC---TTCSEEECTTSC
T ss_pred CcCCccCcChhhccCCCCcCEEECCCCccccC----------------------------Ccccc---ccCCEEECCCCc
Confidence 76642 4555666666666666666666543 22221 234555555555
Q ss_pred CcccCcccccccCCcceEecCCccceeccCccccCCCCCCEEEccCCcccccCCcccccccccccccccCccceecCCcc
Q 041479 284 ISGSIPTEIGNLKNLIIIAIEKFILIRNIPISVGYLLKLQVLSLFENNISREIPSSLGNFTFLTELNLCGNSIRGSVPSA 363 (771)
Q Consensus 284 l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 363 (771)
+++..|..|.++++|+.|++++|.+.+..+..+..+++|++|+|++|+++ .+|..+..+++|++|++++|+|++..+..
T Consensus 204 l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~ 282 (330)
T 1xku_A 204 ITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSND 282 (330)
T ss_dssp CCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTS
T ss_pred CCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhh
Confidence 55444444555555555555555554444455556666666677777666 56666667777777777777776554444
Q ss_pred c
Q 041479 364 L 364 (771)
Q Consensus 364 ~ 364 (771)
|
T Consensus 283 f 283 (330)
T 1xku_A 283 F 283 (330)
T ss_dssp S
T ss_pred c
Confidence 4
No 132
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=6e-34 Score=306.15 Aligned_cols=229 Identities=23% Similarity=0.274 Sum_probs=183.8
Q ss_pred ccccccccccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhcc-CCCCceeEEEEeecCCCCCce
Q 041479 521 KDLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNI-RHRNLVKIITACSTSDFQGNY 596 (771)
Q Consensus 521 ~~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~ 596 (771)
.++.....+|+|.+|+||+|+++.+++.||||++.... ....+.+..|.+++..+ +||||+++++++.+.+
T Consensus 17 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~----- 91 (345)
T 1xjd_A 17 EDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKE----- 91 (345)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS-----
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCC-----
Confidence 44555667899999999999999999999999997542 34457788999999987 8999999999998776
Q ss_pred eEEEEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCcccc
Q 041479 597 FRALVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673 (771)
Q Consensus 597 ~~~lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~ 673 (771)
..|+||||+++|+|.++ ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 92 ~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~ 168 (345)
T 1xjd_A 92 NLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCKEN 168 (345)
T ss_dssp EEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeEChhhhhc
Confidence 78999999999999776 34689999999999999999999996 9999999999999999999999999999854
Q ss_pred CcccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhc
Q 041479 674 PEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVL 738 (771)
Q Consensus 674 ~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 738 (771)
.... ......+||+.|+||| +||++|||++|+.||.+... ..+.+..... ....+..+
T Consensus 169 ~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~~~~~~i~~~-~~~~p~~~ 241 (345)
T 1xjd_A 169 MLGD----AKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDE--EELFHSIRMD-NPFYPRWL 241 (345)
T ss_dssp CCTT----CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHC-CCCCCTTS
T ss_pred ccCC----CcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCH--HHHHHHHHhC-CCCCCccc
Confidence 3221 1223467999999999 69999999999999965321 1122222221 12233445
Q ss_pred CccccccCcccChhchhhcCCHH-HHH
Q 041479 739 DPLFLVGGVQEGEETAEENIKKG-QIR 764 (771)
Q Consensus 739 ~~~~~~~~~~cl~~~p~~Rpt~~-~vl 764 (771)
++.+.....+||+.||++||++. ++.
T Consensus 242 s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 242 EKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp CHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred CHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 66666677799999999999987 554
No 133
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=1.2e-33 Score=310.25 Aligned_cols=236 Identities=18% Similarity=0.136 Sum_probs=182.0
Q ss_pred cccccccccccc--ccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCce
Q 041479 521 KDLLLNVSYESL--VKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNY 596 (771)
Q Consensus 521 ~~~~~~~~l~~~--~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~ 596 (771)
..+.....+|+| .+|+||+|+++.+++.||||++.... ....+.+.+|++++++++|||||++++++.+.+
T Consensus 25 ~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----- 99 (389)
T 3gni_B 25 GCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADN----- 99 (389)
T ss_dssp GGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT-----
T ss_pred CcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECC-----
Confidence 344555678999 99999999999999999999997653 345678889999999999999999999998876
Q ss_pred eEEEEEEeccCCCCCCC-----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCcc
Q 041479 597 FRALVYEFMHHGSLESC-----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTR 671 (771)
Q Consensus 597 ~~~lv~e~~~~g~L~~~-----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~ 671 (771)
..|+|||||++|+|.++ ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||.+.
T Consensus 100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg~~~ 176 (389)
T 3gni_B 100 ELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNL 176 (389)
T ss_dssp EEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGGGCE
T ss_pred EEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccccce
Confidence 78999999999999776 25689999999999999999999996 89999999999999999999999999986
Q ss_pred ccCcccCC---cccccccccccccccchh-----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCC
Q 041479 672 FIPEVMSS---NQCSSVGLKGTVGYATPE-----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALP 731 (771)
Q Consensus 672 ~~~~~~~~---~~~~~~~~~gt~~y~aPE-----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~ 731 (771)
........ ........+||+.|+||| +||++|||++|+.||.+...... +.+......+
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-~~~~~~~~~~ 255 (389)
T 3gni_B 177 SMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQM-LLEKLNGTVP 255 (389)
T ss_dssp ECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTH-HHHC------
T ss_pred eeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHH-HHHHhcCCCC
Confidence 54322110 111122347899999999 69999999999999976422221 1111111110
Q ss_pred --------------------------------------------CchhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 732 --------------------------------------------DQILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 732 --------------------------------------------~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
......+++.+.....+||+.||++|||+.|+++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~ 333 (389)
T 3gni_B 256 CLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLN 333 (389)
T ss_dssp --------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred ccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 0122334444555667999999999999999975
No 134
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=7.2e-34 Score=328.80 Aligned_cols=232 Identities=21% Similarity=0.280 Sum_probs=185.2
Q ss_pred ccccccccceEEEEEecC--CCeEEEEEEeeccc-hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEE
Q 041479 527 VSYESLVKATVYKGILDL--DQTFIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYE 603 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~--~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e 603 (771)
..+|+|.+|+||+|+++. ++..||||+++... ....++|.+|++++++++|||||++++++... ..++|||
T Consensus 342 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~~------~~~lv~E 415 (613)
T 2ozo_A 342 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAE------ALMLVME 415 (613)
T ss_dssp EEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEESS------SEEEEEE
T ss_pred cEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEeccC------CeEEEEE
Confidence 368999999999998863 45679999997543 34578999999999999999999999998753 4699999
Q ss_pred eccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCC
Q 041479 604 FMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSS 679 (771)
Q Consensus 604 ~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 679 (771)
||++|+|.++ ...+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++........
T Consensus 416 ~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~ 492 (613)
T 2ozo_A 416 MAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSY 492 (613)
T ss_dssp CCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-----
T ss_pred eCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCce
Confidence 9999999765 34589999999999999999999996 9999999999999999999999999999876543221
Q ss_pred cccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhhhcCcccc
Q 041479 680 NQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFL 743 (771)
Q Consensus 680 ~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 743 (771)
........+|+.|+||| |||++|||++ |+.||.+.. ...+.+.+....+...+..+++.+.
T Consensus 493 -~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~--~~~~~~~i~~~~~~~~p~~~~~~l~ 569 (613)
T 2ozo_A 493 -YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK--GPEVMAFIEQGKRMECPPECPPELY 569 (613)
T ss_dssp ----------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC--SHHHHHHHHTTCCCCCCTTCCHHHH
T ss_pred -eeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCC--HHHHHHHHHcCCCCCCCCcCCHHHH
Confidence 11122334678999999 7999999998 999997643 2334445544444444556667777
Q ss_pred ccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 744 VGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 744 ~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
.++.+||..||++|||+.++++.|+++
T Consensus 570 ~li~~cl~~dP~~RPs~~~l~~~L~~~ 596 (613)
T 2ozo_A 570 ALMSDCWIYKWEDRPDFLTVEQRMRAC 596 (613)
T ss_dssp HHHHHTTCSSTTTSCCHHHHHHHHHHH
T ss_pred HHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 778899999999999999999999875
No 135
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=7e-34 Score=306.75 Aligned_cols=234 Identities=21% Similarity=0.266 Sum_probs=181.7
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccc-----hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCcee
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ-----RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYF 597 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~-----~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 597 (771)
+.....+|+|.+|+||+|++..+++.||||++.... ....+.+.+|++++++++|||||++++++.+.+ .
T Consensus 28 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~-----~ 102 (345)
T 3hko_A 28 YHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQ-----Y 102 (345)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS-----E
T ss_pred eeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCC-----e
Confidence 344567899999999999999999999999996542 345678999999999999999999999998776 7
Q ss_pred EEEEEEeccCCCCCCCcc-------------------------------------------cCCHHHHHHHHHHHHHHHH
Q 041479 598 RALVYEFMHHGSLESCPR-------------------------------------------ILSFLRRLNIAIDVASALE 634 (771)
Q Consensus 598 ~~lv~e~~~~g~L~~~~~-------------------------------------------~l~~~~~~~i~~~ia~gL~ 634 (771)
.++||||+++|+|.++.. .+++..+..++.|++.||+
T Consensus 103 ~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~ 182 (345)
T 3hko_A 103 ICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALH 182 (345)
T ss_dssp EEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHH
Confidence 899999999999865421 1246677889999999999
Q ss_pred HHHhcCCCCeEecCCCCCCeeeCCCC--ceEEecccCccccCcccCCcccccccccccccccchh---------------
Q 041479 635 YLHHHCKKPIVHCDLKPSNVLLDNDM--TAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE--------------- 697 (771)
Q Consensus 635 ~LH~~~~~~ivHrdlk~~NILl~~~~--~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE--------------- 697 (771)
|||+. +|+||||||+||+++.++ .+||+|||+++.................||+.|+|||
T Consensus 183 ~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Di 259 (345)
T 3hko_A 183 YLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDA 259 (345)
T ss_dssp HHHHT---TEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHH
T ss_pred HHHHC---CccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHH
Confidence 99996 899999999999998766 8999999999865443222222334567999999999
Q ss_pred --HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCC--CchhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 698 --YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALP--DQILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 698 --~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
+||++|||++|+.||.+.... ............ ......+++.+.....+||+.||++|||+.++++
T Consensus 260 wslG~il~el~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~ 330 (345)
T 3hko_A 260 WSAGVLLHLLLMGAVPFPGVNDA-DTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQ 330 (345)
T ss_dssp HHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHH
T ss_pred HHHHHHHHHHHHCCCCCCCCChH-HHHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 699999999999999754222 123333333332 2333345667777778999999999999999986
No 136
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=1.8e-33 Score=302.93 Aligned_cols=227 Identities=22% Similarity=0.196 Sum_probs=180.4
Q ss_pred ccccccccccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhcc-CCCCceeEEEEeecCCCCCce
Q 041479 521 KDLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNI-RHRNLVKIITACSTSDFQGNY 596 (771)
Q Consensus 521 ~~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~ 596 (771)
.++.....+|+|.+|+||+|+++.+++.||||++.... ....+.+.+|+.+++++ +|||||++++++.+.+
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~----- 83 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTES----- 83 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS-----
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCC-----
Confidence 34555667899999999999999999999999997542 34456788999999988 8999999999998776
Q ss_pred eEEEEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCcccc
Q 041479 597 FRALVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673 (771)
Q Consensus 597 ~~~lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~ 673 (771)
..|+||||+++|+|.++ ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 84 ~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~ 160 (345)
T 3a8x_A 84 RLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCKEG 160 (345)
T ss_dssp EEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGGGCBCS
T ss_pred EEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEeccccccc
Confidence 78999999999999766 34689999999999999999999996 9999999999999999999999999999853
Q ss_pred CcccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCC----c---cHHHHHHhhCC
Q 041479 674 PEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEG----L---DLHNFVKMALP 731 (771)
Q Consensus 674 ~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~----~---~~~~~~~~~~~ 731 (771)
.... ......+||+.|+||| +||++|||++|+.||....... . .+.+.... ..
T Consensus 161 ~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~-~~ 235 (345)
T 3a8x_A 161 LRPG----DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE-KQ 235 (345)
T ss_dssp CCTT----CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHH-CC
T ss_pred cCCC----CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHc-CC
Confidence 3221 1223457999999999 6999999999999996421110 0 11111111 12
Q ss_pred CchhhhcCccccccCcccChhchhhcCCH
Q 041479 732 DQILQVLDPLFLVGGVQEGEETAEENIKK 760 (771)
Q Consensus 732 ~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~ 760 (771)
...+..+++.+.....+||+.||++||++
T Consensus 236 ~~~p~~~s~~~~~li~~lL~~dP~~R~~~ 264 (345)
T 3a8x_A 236 IRIPRSLSVKAASVLKSFLNKDPKERLGC 264 (345)
T ss_dssp CCCCTTSCHHHHHHHHHHTCSSTTTSTTC
T ss_pred CCCCCCCCHHHHHHHHHHhcCCHhHCCCC
Confidence 23344556666667779999999999996
No 137
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=1.1e-33 Score=297.43 Aligned_cols=232 Identities=21% Similarity=0.297 Sum_probs=185.6
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEE
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYE 603 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e 603 (771)
...+|+|.+|+||+|++..++..||+|++.... ....+.+.+|+.++++++||||+++++++.... .+....++|||
T Consensus 31 ~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-~~~~~~~lv~e 109 (290)
T 1t4h_A 31 DIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTV-KGKKCIVLVTE 109 (290)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEES-SSCEEEEEEEE
T ss_pred eeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecccc-CCCceEEEEEE
Confidence 446899999999999999999999999997543 445678999999999999999999999986542 22336799999
Q ss_pred eccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeC-CCCceEEecccCccccCcccCC
Q 041479 604 FMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD-NDMTAHMGDFGLTRFIPEVMSS 679 (771)
Q Consensus 604 ~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~-~~~~~kl~DfGla~~~~~~~~~ 679 (771)
|+++|+|.++ ...+++..+..++.|++.||+|||+. .++|+||||||+||+++ .++.+||+|||++.......
T Consensus 110 ~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~-~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~~~-- 186 (290)
T 1t4h_A 110 LMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASF-- 186 (290)
T ss_dssp CCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTTS--
T ss_pred ecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcC-CCCEEECCCCHHHEEEECCCCCEEEeeCCCcccccccc--
Confidence 9999999877 35688999999999999999999986 12399999999999998 78999999999997543322
Q ss_pred cccccccccccccccchh--------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCcccccc
Q 041479 680 NQCSSVGLKGTVGYATPE--------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFLVG 745 (771)
Q Consensus 680 ~~~~~~~~~gt~~y~aPE--------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 745 (771)
.....||+.|+||| +||++|||++|+.||.+................+.......++.+...
T Consensus 187 ----~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 262 (290)
T 1t4h_A 187 ----AKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEI 262 (290)
T ss_dssp ----BEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHH
T ss_pred ----cccccCCcCcCCHHHHhccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCccccCCCCCHHHHHH
Confidence 12346899999999 699999999999999764322222222223333444555566667777
Q ss_pred CcccChhchhhcCCHHHHHH
Q 041479 746 GVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 746 ~~~cl~~~p~~Rpt~~~vl~ 765 (771)
..+||+.||++|||+.|+++
T Consensus 263 i~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 263 IEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp HHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHccCChhhCCCHHHHhh
Confidence 78999999999999999985
No 138
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=8.9e-34 Score=301.56 Aligned_cols=242 Identities=21% Similarity=0.295 Sum_probs=179.6
Q ss_pred ccccccccccccceEEEEEecC---CCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCcee
Q 041479 523 LLLNVSYESLVKATVYKGILDL---DQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYF 597 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~---~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 597 (771)
+.....+|+|.+|+||+|++.. +++.||||++.... ....+.+.+|++++++++||||+++++++.+.+..+...
T Consensus 36 y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 115 (313)
T 3brb_A 36 LILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIPK 115 (313)
T ss_dssp EEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-------C
T ss_pred eeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCCcc
Confidence 3344568999999999998865 44589999996542 345678999999999999999999999998765433335
Q ss_pred EEEEEEeccCCCCCCC---------cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEeccc
Q 041479 598 RALVYEFMHHGSLESC---------PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFG 668 (771)
Q Consensus 598 ~~lv~e~~~~g~L~~~---------~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfG 668 (771)
.++||||+++|+|.++ ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 116 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kl~Dfg 192 (313)
T 3brb_A 116 PMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMTVCVADFG 192 (313)
T ss_dssp EEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSCEEECSCS
T ss_pred cEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEEeecC
Confidence 6999999999999655 24589999999999999999999985 89999999999999999999999999
Q ss_pred CccccCcccCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCC
Q 041479 669 LTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPD 732 (771)
Q Consensus 669 la~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~ 732 (771)
+++....... ........+++.|+||| +|+++|||++ |+.||.+... ....+........
T Consensus 193 ~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--~~~~~~~~~~~~~ 268 (313)
T 3brb_A 193 LSKKIYSGDY--YRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQN--HEMYDYLLHGHRL 268 (313)
T ss_dssp CC------------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCG--GGHHHHHHTTCCC
T ss_pred cceecccccc--cCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCH--HHHHHHHHcCCCC
Confidence 9986544321 11122345788999999 6999999999 8899876422 2334444333333
Q ss_pred chhhhcCccccccCcccChhchhhcCCHHHHHHHHHHhC
Q 041479 733 QILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAIL 771 (771)
Q Consensus 733 ~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~l 771 (771)
..+..+++.+.....+||..||++|||+.++++.|++++
T Consensus 269 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~ 307 (313)
T 3brb_A 269 KQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLL 307 (313)
T ss_dssp CCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 444555666666777999999999999999999999863
No 139
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.5e-33 Score=296.00 Aligned_cols=232 Identities=22% Similarity=0.276 Sum_probs=187.9
Q ss_pred ccccccccceEEEEEec--CCCeEEEEEEeeccc-hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEE
Q 041479 527 VSYESLVKATVYKGILD--LDQTFIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYE 603 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~--~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e 603 (771)
..+|+|.+|+||+|+++ .+++.||||++.... ....+++.+|++++++++||||+++++++... ..++|||
T Consensus 16 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~------~~~lv~e 89 (287)
T 1u59_A 16 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAE------ALMLVME 89 (287)
T ss_dssp EEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEESS------SEEEEEE
T ss_pred ccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEecCC------CcEEEEE
Confidence 37899999999999864 456789999997643 44567899999999999999999999998433 4699999
Q ss_pred eccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCC
Q 041479 604 FMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSS 679 (771)
Q Consensus 604 ~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 679 (771)
|+++|+|.++ ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 90 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~ 166 (287)
T 1u59_A 90 MAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSY 166 (287)
T ss_dssp CCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCE
T ss_pred eCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECcccceeeeccCcce
Confidence 9999999775 34589999999999999999999996 9999999999999999999999999999876443221
Q ss_pred cccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhhhcCcccc
Q 041479 680 NQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFL 743 (771)
Q Consensus 680 ~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 743 (771)
........||+.|+||| +|+++|||++ |+.||.+.. ............+...+..+++.+.
T Consensus 167 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~--~~~~~~~i~~~~~~~~~~~~~~~l~ 243 (287)
T 1u59_A 167 -YTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK--GPEVMAFIEQGKRMECPPECPPELY 243 (287)
T ss_dssp -ECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCC--THHHHHHHHTTCCCCCCTTCCHHHH
T ss_pred -eeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCC--HHHHHHHHhcCCcCCCCCCcCHHHH
Confidence 11222345789999999 6999999999 999997642 2234444444443444555667777
Q ss_pred ccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 744 VGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 744 ~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
....+||+.||++|||+.++++.|+++
T Consensus 244 ~li~~~l~~~p~~Rps~~~l~~~l~~~ 270 (287)
T 1u59_A 244 ALMSDCWIYKWEDRPDFLTVEQRMRAC 270 (287)
T ss_dssp HHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 777899999999999999999999886
No 140
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=1.2e-33 Score=297.35 Aligned_cols=229 Identities=18% Similarity=0.200 Sum_probs=176.3
Q ss_pred ccccccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEE
Q 041479 525 LNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
....+|+|.+|+||+|+++.+++.||||++.... ....+.+.+|++++++++|||||++++++.+.+ ..++||
T Consensus 6 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~~lv~ 80 (292)
T 3o0g_A 6 KLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDK-----KLTLVF 80 (292)
T ss_dssp EEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT-----EEEEEE
T ss_pred eeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCC-----EEEEEE
Confidence 3456899999999999999999999999996543 344578899999999999999999999998776 789999
Q ss_pred EeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCC
Q 041479 603 EFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSS 679 (771)
Q Consensus 603 e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 679 (771)
||++++.+..+ ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 81 e~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 156 (292)
T 3o0g_A 81 EFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVR- 156 (292)
T ss_dssp ECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCS-
T ss_pred ecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecccceecCCccc-
Confidence 99986443322 45689999999999999999999996 999999999999999999999999999986543221
Q ss_pred cccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCC--Cc--------
Q 041479 680 NQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALP--DQ-------- 733 (771)
Q Consensus 680 ~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~--~~-------- 733 (771)
......||+.|+||| +||++|||++|..|+.........+..+...... ..
T Consensus 157 ---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 233 (292)
T 3o0g_A 157 ---CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKL 233 (292)
T ss_dssp ---CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGS
T ss_pred ---cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhccc
Confidence 122356899999999 6999999999888864322211122222221111 00
Q ss_pred -----------------hhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 734 -----------------ILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 734 -----------------~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
....+++.+.....+|++.||++|||+.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 282 (292)
T 3o0g_A 234 PDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQ 282 (292)
T ss_dssp TTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhc
Confidence 01112333334556999999999999999985
No 141
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=100.00 E-value=1.7e-32 Score=293.96 Aligned_cols=281 Identities=21% Similarity=0.242 Sum_probs=211.7
Q ss_pred CccceeeeecCC---------CCcEEEEEcCCCCCcccCCccccCCCCCcEEEcCCCcccccCCccccCCCCCCEEeccc
Q 041479 31 FCQWLGVTCSLK---------YQRVILLNLSGQNLTGTASPYIGNLTFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNS 101 (771)
Q Consensus 31 ~c~w~~v~c~~~---------~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 101 (771)
.|+|..+.|... ..+++.|+|++|++++..+..|..+++|++|+|++|++++..|.+|+++++|++|+|++
T Consensus 30 ~c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 109 (330)
T 1xku_A 30 QCHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSK 109 (330)
T ss_dssp EEETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred cCCCeEEEecCCCccccCccCCCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCC
Confidence 478999999742 25789999999999988888999999999999999999998899999999999999999
Q ss_pred CcCcccCCcccccCCcccccCCccccCCCCCCEEecccccCcCCCCccceeeecccccccccCccccCCCCCCEEecccC
Q 041479 102 NALQGQIPDSRLILNKLEGNIPSELGSLLKFKGLGLANNYFTGPIPHLNMFQVSVYSLTGSIPIQLLNITSMEYFHVSEN 181 (771)
Q Consensus 102 N~l~~~~p~~~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N 181 (771)
|+++ .+|..+. ++|++|++++|++++ ..+..+.++++|++|++++|
T Consensus 110 n~l~---------------~l~~~~~--~~L~~L~l~~n~l~~-----------------~~~~~~~~l~~L~~L~l~~n 155 (330)
T 1xku_A 110 NQLK---------------ELPEKMP--KTLQELRVHENEITK-----------------VRKSVFNGLNQMIVVELGTN 155 (330)
T ss_dssp SCCS---------------BCCSSCC--TTCCEEECCSSCCCB-----------------BCHHHHTTCTTCCEEECCSS
T ss_pred CcCC---------------ccChhhc--ccccEEECCCCcccc-----------------cCHhHhcCCccccEEECCCC
Confidence 9986 3444443 688889888888762 44556889999999999999
Q ss_pred cCcc--cCChhhhhCCCCCcEEEeecCcccccCCccccCCCCCCEEEccccccCCCCCcCcccccCCCCCcEEEccCccc
Q 041479 182 QLVG--ELPPHIGFTLPNVRILLLAGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSL 259 (771)
Q Consensus 182 ~l~g--~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l 259 (771)
.++. ..+..+ ..+++|+.|++++|+++. +|..+. ++|++|++++|++++..|..| ..+++|+.|++++|.+
T Consensus 156 ~l~~~~~~~~~~-~~l~~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~---~~l~~L~~L~Ls~n~l 228 (330)
T 1xku_A 156 PLKSSGIENGAF-QGMKKLSYIRIADTNITT-IPQGLP--PSLTELHLDGNKITKVDAASL---KGLNNLAKLGLSFNSI 228 (330)
T ss_dssp CCCGGGBCTTGG-GGCTTCCEEECCSSCCCS-CCSSCC--TTCSEEECTTSCCCEECTGGG---TTCTTCCEEECCSSCC
T ss_pred cCCccCcChhhc-cCCCCcCEEECCCCcccc-CCcccc--ccCCEEECCCCcCCccCHHHh---cCCCCCCEEECCCCcC
Confidence 9962 344444 489999999999999995 555543 899999999999998877666 7778899999999999
Q ss_pred cccCChhhhhcccccceeecccCcCcccCcccccccCCcceEecCCccceeccCccccC------CCCCCEEEccCCccc
Q 041479 260 SGTLPNSLANFSSHLRYLYMSANPISGSIPTEIGNLKNLIIIAIEKFILIRNIPISVGY------LLKLQVLSLFENNIS 333 (771)
Q Consensus 260 ~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~------l~~L~~L~Ls~N~l~ 333 (771)
++..+..+..+. +|++|++++|+++ .+|..+..+++|+.|++++|.+.+..+..|.. ...|+.|++++|.+.
T Consensus 229 ~~~~~~~~~~l~-~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~ 306 (330)
T 1xku_A 229 SAVDNGSLANTP-HLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQ 306 (330)
T ss_dssp CEECTTTGGGST-TCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSC
T ss_pred ceeChhhccCCC-CCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCcccccccccccceEeecCccc
Confidence 866666777765 7888888888888 56666766666666666666665544444432 234455555555543
Q ss_pred c--cCCcccccccccccccccCc
Q 041479 334 R--EIPSSLGNFTFLTELNLCGN 354 (771)
Q Consensus 334 ~--~~p~~~~~l~~L~~L~Ls~N 354 (771)
. ..|..|..+.+|+.++|++|
T Consensus 307 ~~~i~~~~f~~~~~l~~l~L~~N 329 (330)
T 1xku_A 307 YWEIQPSTFRCVYVRAAVQLGNY 329 (330)
T ss_dssp GGGSCGGGGTTCCCGGGEEC---
T ss_pred ccccCccccccccceeEEEeccc
Confidence 2 23344444444555554444
No 142
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=1.7e-33 Score=294.51 Aligned_cols=236 Identities=20% Similarity=0.296 Sum_probs=186.4
Q ss_pred ccccccccccccccceEEEEEecCC---CeEEEEEEeecc-chhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCce
Q 041479 521 KDLLLNVSYESLVKATVYKGILDLD---QTFIAVKVLFLH-QRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNY 596 (771)
Q Consensus 521 ~~~~~~~~l~~~~~~~Vy~~~~~~~---~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~ 596 (771)
..+.....+|+|.+|+||+|++..+ +..||||.+... .....+++.+|++++++++||||+++++++.+..
T Consensus 12 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~----- 86 (281)
T 3cc6_A 12 EDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEP----- 86 (281)
T ss_dssp GGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSSS-----
T ss_pred cceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCCC-----
Confidence 3444556789999999999987643 346999999754 3345678999999999999999999999976543
Q ss_pred eEEEEEEeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccc
Q 041479 597 FRALVYEFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRF 672 (771)
Q Consensus 597 ~~~lv~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~ 672 (771)
.|+||||+++|+|.++ ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 87 -~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~ 162 (281)
T 3cc6_A 87 -TWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFGLSRY 162 (281)
T ss_dssp -CEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCCGGGC
T ss_pred -CEEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccCCCcc
Confidence 4899999999999776 34589999999999999999999986 999999999999999999999999999986
Q ss_pred cCcccCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhh
Q 041479 673 IPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQ 736 (771)
Q Consensus 673 ~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 736 (771)
...... .......||+.|+||| +|+++|||++ |+.||..... ...............+.
T Consensus 163 ~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~--~~~~~~~~~~~~~~~~~ 237 (281)
T 3cc6_A 163 IEDEDY---YKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLEN--KDVIGVLEKGDRLPKPD 237 (281)
T ss_dssp C------------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCG--GGHHHHHHHTCCCCCCT
T ss_pred cccccc---cccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCCh--HHHHHHHhcCCCCCCCC
Confidence 644321 1122345788999999 6999999998 9999975322 23444444443333445
Q ss_pred hcCccccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 737 VLDPLFLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 737 ~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
.+++.+.....+||..||++|||+.|+++.|+++
T Consensus 238 ~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~ 271 (281)
T 3cc6_A 238 LCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDV 271 (281)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHH
Confidence 5666676777799999999999999999999876
No 143
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=4.2e-34 Score=310.82 Aligned_cols=243 Identities=17% Similarity=0.171 Sum_probs=183.3
Q ss_pred ccccccccccccceEEEEEecCC-----CeEEEEEEeeccchh-----------hHHHHHHHHHHHhccCCCCceeEEEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLD-----QTFIAVKVLFLHQRG-----------ALKSFMAECQALRNIRHRNLVKIITA 586 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~-----~~~vAvK~~~~~~~~-----------~~~~~~~E~~~l~~l~H~nIv~l~~~ 586 (771)
+.....+|+|.+|+||+|+++.+ ++.||||++...... ....+..|+..++.++|||||+++++
T Consensus 37 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~ 116 (364)
T 3op5_A 37 WKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGS 116 (364)
T ss_dssp EEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEEE
T ss_pred EEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEee
Confidence 34455689999999999999775 468999998654321 11234567777888899999999999
Q ss_pred eecCCCCCceeEEEEEEeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeC--CCC
Q 041479 587 CSTSDFQGNYFRALVYEFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD--NDM 660 (771)
Q Consensus 587 ~~~~~~~~~~~~~lv~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~--~~~ 660 (771)
+.... .+..+.|+||||+ +|+|.++ ...+++.++..++.|++.||+|||+. +|+||||||+|||++ .++
T Consensus 117 ~~~~~-~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~~~~~~ 191 (364)
T 3op5_A 117 GLHDK-NGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLNYKNPD 191 (364)
T ss_dssp EEEEE-TTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEESSCTT
T ss_pred eeecc-CCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEecCCCC
Confidence 87642 2233689999999 9999876 35689999999999999999999996 999999999999998 889
Q ss_pred ceEEecccCccccCcccCCcc---cccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccH
Q 041479 661 TAHMGDFGLTRFIPEVMSSNQ---CSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDL 722 (771)
Q Consensus 661 ~~kl~DfGla~~~~~~~~~~~---~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~ 722 (771)
.+||+|||+++.+........ ......+||+.||||| |||++|||+||+.||.+.... ...
T Consensus 192 ~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~-~~~ 270 (364)
T 3op5_A 192 QVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKD-PKY 270 (364)
T ss_dssp CEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTC-HHH
T ss_pred eEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccC-HHH
Confidence 999999999987654332211 1123456999999999 799999999999999864332 223
Q ss_pred HHHHHhhCCCchhh---------hcCccccccCcccChhchhhcCCHHHHHHHHHHhC
Q 041479 723 HNFVKMALPDQILQ---------VLDPLFLVGGVQEGEETAEENIKKGQIRESLIAIL 771 (771)
Q Consensus 723 ~~~~~~~~~~~~~~---------~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~l 771 (771)
........+..... .+.+.+...+..||+.||++||++.++++.|++++
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~~l~~~~ 328 (364)
T 3op5_A 271 VRDSKIRYRENIASLMDKCFPAANAPGEIAKYMETVKLLDYTEKPLYENLRDILLQGL 328 (364)
T ss_dssp HHHHHHHHHHCHHHHHHHHSCTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHhhhhHHHHHHHhcccccCHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHH
Confidence 33333222222222 22444555667999999999999999999998763
No 144
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=1.1e-33 Score=303.12 Aligned_cols=236 Identities=18% Similarity=0.223 Sum_probs=185.0
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhcc-CCCCceeEEEEeecCCCCCceeEEEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNI-RHRNLVKIITACSTSDFQGNYFRALV 601 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~~~~lv 601 (771)
+.....+|+|.+|+||+|++..+++.||||++..... .+.+.+|+++++++ +||||+++++++...+ ..++|
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~-----~~~lv 83 (330)
T 2izr_A 11 FRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGK-----YNAMV 83 (330)
T ss_dssp EEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETT-----EEEEE
T ss_pred eEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCC-----ccEEE
Confidence 3345568999999999999999999999999865432 34688999999999 8999999999998876 78999
Q ss_pred EEeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCc-----eEEecccCccc
Q 041479 602 YEFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMT-----AHMGDFGLTRF 672 (771)
Q Consensus 602 ~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~-----~kl~DfGla~~ 672 (771)
|||+ +|+|.++ ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||+++.
T Consensus 84 ~e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~ 159 (330)
T 2izr_A 84 LELL-GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKE 159 (330)
T ss_dssp EECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEE
T ss_pred EEeC-CCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEccccee
Confidence 9999 8999776 35789999999999999999999996 9999999999999998887 99999999986
Q ss_pred cCcccCCc---ccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCc--cHHHHHHhhCCC
Q 041479 673 IPEVMSSN---QCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGL--DLHNFVKMALPD 732 (771)
Q Consensus 673 ~~~~~~~~---~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~--~~~~~~~~~~~~ 732 (771)
........ .......+||+.|+||| +||++|||++|+.||.+...... .+..+.....+.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~ 239 (330)
T 2izr_A 160 YIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRAT 239 (330)
T ss_dssp SBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHS
T ss_pred eecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccC
Confidence 54432211 11124567999999999 79999999999999976432221 112222222221
Q ss_pred ch---hhhcCccccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 733 QI---LQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 733 ~~---~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
.. .... +.+......||+.||++||++.++++.|+++
T Consensus 240 ~~~~~~~~~-p~~~~li~~~l~~~p~~RP~~~~l~~~l~~~ 279 (330)
T 2izr_A 240 PIEVLCENF-PEMATYLRYVRRLDFFEKPDYDYLRKLFTDL 279 (330)
T ss_dssp CHHHHTTTC-HHHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred CHHHHhccC-hHHHHHHHHHHhCCCCCCCCHHHHHHHHHHH
Confidence 11 1112 2555667799999999999999999999875
No 145
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=1e-33 Score=313.30 Aligned_cols=232 Identities=18% Similarity=0.133 Sum_probs=182.5
Q ss_pred cccccccccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeE
Q 041479 522 DLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFR 598 (771)
Q Consensus 522 ~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 598 (771)
++.....+|+|.+|+||+|+++.+++.||||++.... ....+.+.+|+.++..++|||||++++++.+.+ ..
T Consensus 75 ~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~-----~~ 149 (437)
T 4aw2_A 75 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDN-----NL 149 (437)
T ss_dssp GEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSS-----EE
T ss_pred heEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCC-----EE
Confidence 3444567899999999999999999999999996532 222345889999999999999999999998876 78
Q ss_pred EEEEEeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccC
Q 041479 599 ALVYEFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIP 674 (771)
Q Consensus 599 ~lv~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~ 674 (771)
|+|||||++|+|.++ ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+|+...
T Consensus 150 ~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~DFGla~~~~ 226 (437)
T 4aw2_A 150 YLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCLKLM 226 (437)
T ss_dssp EEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcchhhhhhcc
Confidence 999999999999766 35689999999999999999999986 89999999999999999999999999997654
Q ss_pred cccCCcccccccccccccccchh--------------------HHHHHHHHHhCCCCCCccccCCccHHHHHHh--hCC-
Q 041479 675 EVMSSNQCSSVGLKGTVGYATPE--------------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKM--ALP- 731 (771)
Q Consensus 675 ~~~~~~~~~~~~~~gt~~y~aPE--------------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~--~~~- 731 (771)
.... ......+||+.||||| +||++|||++|+.||.+.... .....+... .++
T Consensus 227 ~~~~---~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~-~~~~~i~~~~~~~~~ 302 (437)
T 4aw2_A 227 EDGT---VQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLV-ETYGKIMNHKERFQF 302 (437)
T ss_dssp TTSC---EECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH-HHHHHHHTHHHHCCC
T ss_pred cCCC---cccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChh-HHHHhhhhccccccC
Confidence 4321 2223457999999999 699999999999999753211 112222221 121
Q ss_pred CchhhhcCccccccCcccChhchhh--cCCHHHHHH
Q 041479 732 DQILQVLDPLFLVGGVQEGEETAEE--NIKKGQIRE 765 (771)
Q Consensus 732 ~~~~~~~~~~~~~~~~~cl~~~p~~--Rpt~~~vl~ 765 (771)
+.....+++.......+|+..+|++ ||++.|+++
T Consensus 303 p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 303 PTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp CSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred CcccccCCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence 1111234555556666888888888 999999875
No 146
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=4.4e-34 Score=313.81 Aligned_cols=233 Identities=18% Similarity=0.131 Sum_probs=186.0
Q ss_pred ccccccccccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCcee
Q 041479 521 KDLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYF 597 (771)
Q Consensus 521 ~~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 597 (771)
.++.....+|+|.+|+||+|+++.+++.||||++.... ....+.+.+|+.+++.++|||||++++++.+.+ .
T Consensus 69 ~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~-----~ 143 (410)
T 3v8s_A 69 EDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR-----Y 143 (410)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSS-----E
T ss_pred cccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECC-----E
Confidence 34555667999999999999999999999999996532 223356889999999999999999999998776 7
Q ss_pred EEEEEEeccCCCCCCC--cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCc
Q 041479 598 RALVYEFMHHGSLESC--PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPE 675 (771)
Q Consensus 598 ~~lv~e~~~~g~L~~~--~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~ 675 (771)
.|+|||||++|+|.++ ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+|+....
T Consensus 144 ~~lV~E~~~gg~L~~~l~~~~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~ 220 (410)
T 3v8s_A 144 LYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNK 220 (410)
T ss_dssp EEEEECCCTTEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EEEEEeCCCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEeccceeEeecc
Confidence 8999999999999776 34588999999999999999999996 999999999999999999999999999986544
Q ss_pred ccCCcccccccccccccccchh-------------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhh--CCCch
Q 041479 676 VMSSNQCSSVGLKGTVGYATPE-------------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMA--LPDQI 734 (771)
Q Consensus 676 ~~~~~~~~~~~~~gt~~y~aPE-------------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~--~~~~~ 734 (771)
.. .......+||+.|+||| +||++|||++|+.||.+.... .....+.... .+...
T Consensus 221 ~~---~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~-~~~~~i~~~~~~~~~p~ 296 (410)
T 3v8s_A 221 EG---MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV-GTYSKIMNHKNSLTFPD 296 (410)
T ss_dssp TS---EEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHH-HHHHHHHTHHHHCCCCT
T ss_pred CC---cccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChh-hHHHHHHhccccccCCC
Confidence 32 12233567999999999 699999999999999653211 1223333322 22222
Q ss_pred hhhcCccccccCcccChhchhh--cCCHHHHHH
Q 041479 735 LQVLDPLFLVGGVQEGEETAEE--NIKKGQIRE 765 (771)
Q Consensus 735 ~~~~~~~~~~~~~~cl~~~p~~--Rpt~~~vl~ 765 (771)
...+++.+.....+|++.+|.+ ||++.|+++
T Consensus 297 ~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~ 329 (410)
T 3v8s_A 297 DNDISKEAKNLICAFLTDREVRLGRNGVEEIKR 329 (410)
T ss_dssp TCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHT
T ss_pred cccccHHHHHHHHHHccChhhhCCCCCHHHHhc
Confidence 3345566666677999999988 999999975
No 147
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=1.7e-33 Score=314.70 Aligned_cols=229 Identities=25% Similarity=0.315 Sum_probs=186.8
Q ss_pred ccccccccccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCcee
Q 041479 521 KDLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYF 597 (771)
Q Consensus 521 ~~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 597 (771)
..+.....+|+|.+|+||+|++..+++.||||++.... ....+.+.+|+++++.++||||+++++++.+.+ .
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~-----~ 90 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPS-----D 90 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSS-----E
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECC-----E
Confidence 44555677999999999999999889999999996543 234578999999999999999999999998776 7
Q ss_pred EEEEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccC
Q 041479 598 RALVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIP 674 (771)
Q Consensus 598 ~~lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~ 674 (771)
.|+||||+++|+|.++ ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 91 ~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG~a~~~~ 167 (476)
T 2y94_A 91 IFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMS 167 (476)
T ss_dssp EEEEEECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCSSCEECC
T ss_pred EEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEeccchhhcc
Confidence 8999999999999776 34689999999999999999999985 99999999999999999999999999998654
Q ss_pred cccCCcccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhc
Q 041479 675 EVMSSNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVL 738 (771)
Q Consensus 675 ~~~~~~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 738 (771)
... .....+||+.|+||| +||++|||++|+.||.+.... .....+..+.. ..+..+
T Consensus 168 ~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~-~~~~~i~~~~~--~~p~~~ 239 (476)
T 2y94_A 168 DGE-----FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVP-TLFKKICDGIF--YTPQYL 239 (476)
T ss_dssp TTC-----CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSH-HHHHHHHTTCC--CCCTTC
T ss_pred ccc-----cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHH-HHHHHHhcCCc--CCCccC
Confidence 422 122357999999999 699999999999999763211 11222222222 223445
Q ss_pred CccccccCcccChhchhhcCCHHHHHH
Q 041479 739 DPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 739 ~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
++.+.....+||+.||++|||+.|+++
T Consensus 240 s~~~~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 240 NPSVISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp CHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence 666666777999999999999999985
No 148
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=7.7e-34 Score=304.86 Aligned_cols=235 Identities=23% Similarity=0.241 Sum_probs=190.5
Q ss_pred ccccccccccceEEEEEecCCC-----eEEEEEEeeccc-hhhHHHHHHHHHHHhcc-CCCCceeEEEEeecCCCCCcee
Q 041479 525 LNVSYESLVKATVYKGILDLDQ-----TFIAVKVLFLHQ-RGALKSFMAECQALRNI-RHRNLVKIITACSTSDFQGNYF 597 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~~~-----~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~~ 597 (771)
....+|+|.+|+||+|++..++ +.||||++.... ....+.+.+|+++++++ +||||+++++++.+.+ .
T Consensus 50 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~-----~ 124 (333)
T 2i1m_A 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGG-----P 124 (333)
T ss_dssp EEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-----S
T ss_pred eeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCC-----c
Confidence 3456899999999999987654 379999996543 34567899999999999 8999999999998766 6
Q ss_pred EEEEEEeccCCCCCCCc-----------------ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCC
Q 041479 598 RALVYEFMHHGSLESCP-----------------RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDM 660 (771)
Q Consensus 598 ~~lv~e~~~~g~L~~~~-----------------~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~ 660 (771)
.++||||+++|+|.++. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++
T Consensus 125 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~ 201 (333)
T 2i1m_A 125 VLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLTNGH 201 (333)
T ss_dssp CEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCEEEGGG
T ss_pred eEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEEECCCC
Confidence 79999999999997651 2468899999999999999999996 999999999999999999
Q ss_pred ceEEecccCccccCcccCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHH
Q 041479 661 TAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHN 724 (771)
Q Consensus 661 ~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~ 724 (771)
.+||+|||+++....... ........||+.|+||| +||++|||+| |..||.+.... ..+..
T Consensus 202 ~~kl~Dfg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~-~~~~~ 278 (333)
T 2i1m_A 202 VAKIGDFGLARDIMNDSN--YIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVN-SKFYK 278 (333)
T ss_dssp EEEBCCCGGGCCGGGCTT--SEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSS-HHHHH
T ss_pred eEEECccccccccccccc--eeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchh-HHHHH
Confidence 999999999986543322 11223345788999999 6999999999 99999764322 23445
Q ss_pred HHHhhCCCchhhhcCccccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 725 FVKMALPDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 725 ~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
......+...+...++.+.....+||+.||++|||+.++++.|+++
T Consensus 279 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~ 324 (333)
T 2i1m_A 279 LVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQ 324 (333)
T ss_dssp HHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHhcCCCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHH
Confidence 5555555444555566666777799999999999999999999875
No 149
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=1.8e-33 Score=297.47 Aligned_cols=242 Identities=23% Similarity=0.223 Sum_probs=187.0
Q ss_pred ccccccccccccceEEEEE----ecCCCeEEEEEEeeccc-hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCcee
Q 041479 523 LLLNVSYESLVKATVYKGI----LDLDQTFIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYF 597 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~----~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 597 (771)
+.....+|+|.+|+||+|+ ...+++.||||++.... ....+.+.+|++++++++||||+++++++.+.+.. .
T Consensus 23 ~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~---~ 99 (302)
T 4e5w_A 23 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGN---G 99 (302)
T ss_dssp EEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---C---C
T ss_pred hhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCc---e
Confidence 3345678999999999999 45678899999996543 34567899999999999999999999999875322 5
Q ss_pred EEEEEEeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCcccc
Q 041479 598 RALVYEFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673 (771)
Q Consensus 598 ~~lv~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~ 673 (771)
.++||||+++|+|.++ ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 100 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~ 176 (302)
T 4e5w_A 100 IKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFGLTKAI 176 (302)
T ss_dssp EEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEEC
T ss_pred EEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECcccccccc
Confidence 7899999999999876 34689999999999999999999996 9999999999999999999999999999876
Q ss_pred CcccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCcccc----------CCcc---HHHH
Q 041479 674 PEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFT----------EGLD---LHNF 725 (771)
Q Consensus 674 ~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~----------~~~~---~~~~ 725 (771)
...... ........||..|+||| +|+++|||++|..|+...+. .... +...
T Consensus 177 ~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (302)
T 4e5w_A 177 ETDKEY-YTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNT 255 (302)
T ss_dssp CTTCCE-EECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHH
T ss_pred cCCCcc-eeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHH
Confidence 543221 12233456889999999 69999999999998643211 1111 1122
Q ss_pred HHhhCCCchhhhcCccccccCcccChhchhhcCCHHHHHHHHHHhC
Q 041479 726 VKMALPDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAIL 771 (771)
Q Consensus 726 ~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~l 771 (771)
.....+...+..+++.+.....+||+.||++|||+.++++.|++++
T Consensus 256 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~ll 301 (302)
T 4e5w_A 256 LKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEALL 301 (302)
T ss_dssp HHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHh
Confidence 2222233334455666667777999999999999999999999874
No 150
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=1.4e-33 Score=294.45 Aligned_cols=228 Identities=20% Similarity=0.181 Sum_probs=186.4
Q ss_pred cccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEE
Q 041479 524 LLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYE 603 (771)
Q Consensus 524 ~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e 603 (771)
.....+|+|.+|+||+|+++.+++.||+|++........+.+.+|++++++++||||+++++++.+.+ ..++|||
T Consensus 12 ~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-----~~~lv~e 86 (277)
T 3f3z_A 12 TLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNT-----DIYLVME 86 (277)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS-----EEEEEEE
T ss_pred EeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCC-----eEEEEEe
Confidence 34456899999999999999999999999997765566788999999999999999999999998776 7899999
Q ss_pred eccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeee---CCCCceEEecccCccccCccc
Q 041479 604 FMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLL---DNDMTAHMGDFGLTRFIPEVM 677 (771)
Q Consensus 604 ~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl---~~~~~~kl~DfGla~~~~~~~ 677 (771)
|+++++|.++ ...+++.++..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++......
T Consensus 87 ~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~ 163 (277)
T 3f3z_A 87 LCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK 163 (277)
T ss_dssp CCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTS
T ss_pred ccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecccceeccCcc
Confidence 9999999765 44689999999999999999999986 89999999999999 788899999999998654332
Q ss_pred CCcccccccccccccccchh--------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCC--CchhhhcCcc
Q 041479 678 SSNQCSSVGLKGTVGYATPE--------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALP--DQILQVLDPL 741 (771)
Q Consensus 678 ~~~~~~~~~~~gt~~y~aPE--------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 741 (771)
. .....||+.|+||| +|+++|||++|+.||.+.... .....+.....+ ......+++.
T Consensus 164 ~-----~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 237 (277)
T 3f3z_A 164 M-----MRTKVGTPYYVSPQVLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDS-EVMLKIREGTFTFPEKDWLNVSPQ 237 (277)
T ss_dssp C-----BCCCCSCTTTCCHHHHTTCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHCCCCCCHHHHTTSCHH
T ss_pred c-----hhccCCCCCccChHHhcccCCchhhehhHHHHHHHHHHCCCCCCCCCHH-HHHHHHHhCCCCCCchhhhcCCHH
Confidence 1 22346899999999 699999999999999764221 122233333332 2222345666
Q ss_pred ccccCcccChhchhhcCCHHHHHH
Q 041479 742 FLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 742 ~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
+.....+|++.||++|||+.++++
T Consensus 238 ~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 238 AESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp HHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred HHHHHHHHccCChhhCcCHHHHhc
Confidence 667777999999999999999984
No 151
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=1.1e-33 Score=306.86 Aligned_cols=228 Identities=20% Similarity=0.151 Sum_probs=173.9
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
+.....+|+|.+|+||+++++.+++.||||++..... ..+.+.+|+.+++.++|||||++++++.+.+ ..|+||
T Consensus 22 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~-----~~~lv~ 95 (361)
T 3uc3_A 22 YDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPT-----HLAIIM 95 (361)
T ss_dssp EEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSS-----EEEEEE
T ss_pred EEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCC-----EEEEEE
Confidence 3445568999999999999999999999999965432 3467889999999999999999999998776 789999
Q ss_pred EeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCc--eEEecccCccccCccc
Q 041479 603 EFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMT--AHMGDFGLTRFIPEVM 677 (771)
Q Consensus 603 e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~--~kl~DfGla~~~~~~~ 677 (771)
||+++|+|.++ ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||+++......
T Consensus 96 e~~~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~ 172 (361)
T 3uc3_A 96 EYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS 172 (361)
T ss_dssp ECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCCCC-------
T ss_pred EeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecCccccccccC
Confidence 99999999776 35689999999999999999999986 8999999999999987665 9999999997432221
Q ss_pred CCcccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHh----hCCCchhhh
Q 041479 678 SSNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKM----ALPDQILQV 737 (771)
Q Consensus 678 ~~~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~----~~~~~~~~~ 737 (771)
.....+||+.|+||| +||++|||++|+.||.+..... ........ .........
T Consensus 173 -----~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 246 (361)
T 3uc3_A 173 -----QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPR-DYRKTIQRILSVKYSIPDDIR 246 (361)
T ss_dssp -------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CC-CHHHHHHHHHTTCCCCCTTSC
T ss_pred -----CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHH-HHHHHHHHHhcCCCCCCCcCC
Confidence 122356999999999 6999999999999997643222 23222222 222222223
Q ss_pred cCccccccCcccChhchhhcCCHHHHHH
Q 041479 738 LDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 738 ~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
+++.+.....+||+.||++|||+.|+++
T Consensus 247 ~s~~~~~li~~~L~~dP~~Rps~~ell~ 274 (361)
T 3uc3_A 247 ISPECCHLISRIFVADPATRISIPEIKT 274 (361)
T ss_dssp CCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred CCHHHHHHHHHHccCChhHCcCHHHHHh
Confidence 4556666777999999999999999985
No 152
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.2e-33 Score=301.50 Aligned_cols=237 Identities=22% Similarity=0.252 Sum_probs=183.8
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccc-hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALV 601 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv 601 (771)
+.....+|+|.+|+||+|++..+++.||||++.... ....+.+.+|++++++++||||+++++++...+.. ..++|
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~---~~~lv 87 (319)
T 4euu_A 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTR---HKVLI 87 (319)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTC---CEEEE
T ss_pred EEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCc---eEEEE
Confidence 334556899999999999999988999999996543 34467889999999999999999999998765422 57999
Q ss_pred EEeccCCCCCCCcc------cCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeee----CCCCceEEecccCcc
Q 041479 602 YEFMHHGSLESCPR------ILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLL----DNDMTAHMGDFGLTR 671 (771)
Q Consensus 602 ~e~~~~g~L~~~~~------~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl----~~~~~~kl~DfGla~ 671 (771)
|||+++|+|.++.. .+++.++..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++
T Consensus 88 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~ 164 (319)
T 4euu_A 88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (319)
T ss_dssp EECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCTTCE
T ss_pred EeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCCCce
Confidence 99999999977621 289999999999999999999996 99999999999999 778889999999998
Q ss_pred ccCcccCCcccccccccccccccchh-----------------------HHHHHHHHHhCCCCCCccccC---CccHHHH
Q 041479 672 FIPEVMSSNQCSSVGLKGTVGYATPE-----------------------YGILLLEIFTGKRPTSDMFTE---GLDLHNF 725 (771)
Q Consensus 672 ~~~~~~~~~~~~~~~~~gt~~y~aPE-----------------------~Gv~l~el~tg~~P~~~~~~~---~~~~~~~ 725 (771)
....... .....||+.|+||| +||++|||++|+.||...... ...+...
T Consensus 165 ~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~ 239 (319)
T 4euu_A 165 ELEDDEQ-----FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKI 239 (319)
T ss_dssp ECCTTCC-----BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHH
T ss_pred ecCCCCc-----eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHH
Confidence 6654321 22356999999999 599999999999999643221 1122333
Q ss_pred HHhhCCC-----------------------chhhhcCccccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 726 VKMALPD-----------------------QILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 726 ~~~~~~~-----------------------~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
.....+. ...+.+++.+.....+||+.||++|||+.|+++..++-
T Consensus 240 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~d~ 307 (319)
T 4euu_A 240 ITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDI 307 (319)
T ss_dssp HHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHH
T ss_pred hcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccHHH
Confidence 3332211 11122222333445599999999999999999988763
No 153
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.8e-33 Score=299.83 Aligned_cols=242 Identities=20% Similarity=0.234 Sum_probs=180.0
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhcc--CCCCceeEEEEeecCCCCCceeEEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNI--RHRNLVKIITACSTSDFQGNYFRAL 600 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l--~H~nIv~l~~~~~~~~~~~~~~~~l 600 (771)
+.....+|+|.+|+||+|++. ++.||||++.... ...+.+|.+++... +||||+++++++..... .....|+
T Consensus 39 y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~-~~~~~~l 112 (337)
T 3mdy_A 39 IQMVKQIGKGRYGEVWMGKWR--GEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIAADIKGTG-SWTQLYL 112 (337)
T ss_dssp CEEEEEEEEETTEEEEEEEET--TEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCG-GGCEEEE
T ss_pred eEEEeEeecCCCeEEEEEEEC--CceEEEEEEeccc---cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCC-CCCceEE
Confidence 334556899999999999886 6799999996443 34555666666655 89999999999877631 1126799
Q ss_pred EEEeccCCCCCCC--cccCCHHHHHHHHHHHHHHHHHHHhcC-----CCCeEecCCCCCCeeeCCCCceEEecccCcccc
Q 041479 601 VYEFMHHGSLESC--PRILSFLRRLNIAIDVASALEYLHHHC-----KKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673 (771)
Q Consensus 601 v~e~~~~g~L~~~--~~~l~~~~~~~i~~~ia~gL~~LH~~~-----~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~ 673 (771)
||||+++|+|.++ ...+++..+..++.|++.||+|||+.+ +++|+||||||+||+++.++.+||+|||+++..
T Consensus 113 v~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a~~~ 192 (337)
T 3mdy_A 113 ITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKF 192 (337)
T ss_dssp EECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEeccCCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCceee
Confidence 9999999999877 346899999999999999999999741 238999999999999999999999999999766
Q ss_pred CcccCCcccccccccccccccchh---------------------HHHHHHHHHhC----------CCCCCccccCCccH
Q 041479 674 PEVMSSNQCSSVGLKGTVGYATPE---------------------YGILLLEIFTG----------KRPTSDMFTEGLDL 722 (771)
Q Consensus 674 ~~~~~~~~~~~~~~~gt~~y~aPE---------------------~Gv~l~el~tg----------~~P~~~~~~~~~~~ 722 (771)
..............+||+.|+||| +||++|||+|| +.||.+........
T Consensus 193 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~ 272 (337)
T 3mdy_A 193 ISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSY 272 (337)
T ss_dssp C---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCH
T ss_pred ccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCCch
Confidence 543322222233457999999999 59999999999 77776654444433
Q ss_pred HHHHHhhC----CCchh-----hhcCccccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 723 HNFVKMAL----PDQIL-----QVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 723 ~~~~~~~~----~~~~~-----~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
..+..... ....+ +.+.+.+...+.+||+.||++|||+.++++.|+++
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l 329 (337)
T 3mdy_A 273 EDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKM 329 (337)
T ss_dssp HHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred hhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHHHHHH
Confidence 33332221 11111 12233455566799999999999999999999986
No 154
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=9.5e-34 Score=297.14 Aligned_cols=228 Identities=21% Similarity=0.231 Sum_probs=178.4
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccc-hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALV 601 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv 601 (771)
+.....+|+|.+|+||+|+.+.+++.||||++.... ....+.+.+|++++++++||||+++++++.+.+ ..++|
T Consensus 24 y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-----~~~lv 98 (285)
T 3is5_A 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYH-----NMYIV 98 (285)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS-----EEEEE
T ss_pred eeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCC-----eEEEE
Confidence 444567899999999999999999999999997654 334678999999999999999999999998766 78999
Q ss_pred EEeccCCCCCCC-------cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeee---CCCCceEEecccCcc
Q 041479 602 YEFMHHGSLESC-------PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLL---DNDMTAHMGDFGLTR 671 (771)
Q Consensus 602 ~e~~~~g~L~~~-------~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl---~~~~~~kl~DfGla~ 671 (771)
|||+++|+|.+. ...+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++
T Consensus 99 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~ 175 (285)
T 3is5_A 99 METCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAE 175 (285)
T ss_dssp ECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCCCCC
T ss_pred EEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeeecce
Confidence 999999999765 25689999999999999999999986 99999999999999 456789999999998
Q ss_pred ccCcccCCcccccccccccccccchh--------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCC--Cchh
Q 041479 672 FIPEVMSSNQCSSVGLKGTVGYATPE--------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALP--DQIL 735 (771)
Q Consensus 672 ~~~~~~~~~~~~~~~~~gt~~y~aPE--------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~--~~~~ 735 (771)
....... .....||+.|+||| +|+++|||++|+.||.+.... ..........+ ....
T Consensus 176 ~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~ 248 (285)
T 3is5_A 176 LFKSDEH-----STNAAGTALYMAPEVFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLE--EVQQKATYKEPNYAVEC 248 (285)
T ss_dssp C---------------CTTGGGCCHHHHTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH--HHHHHHHHCCCCCCC--
T ss_pred ecCCccc-----CcCcccccCcCChHHhccCCCcccCeehHHHHHHHHHhCCCCCCCCCHH--HHHhhhccCCccccccc
Confidence 6544221 22346899999999 699999999999999753211 12222222222 1112
Q ss_pred hhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 736 QVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 736 ~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
..+++.+.....+||+.||++|||+.|+++
T Consensus 249 ~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 249 RPLTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred CcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 234555556677999999999999999985
No 155
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=1.9e-33 Score=303.16 Aligned_cols=228 Identities=18% Similarity=0.143 Sum_probs=186.3
Q ss_pred cccccccccccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCce
Q 041479 520 RKDLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNY 596 (771)
Q Consensus 520 ~~~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~ 596 (771)
...+.....+|+|.+|+||+|+++.+++.||||++.... ....+.+.+|+++++.++||||+++++++.+.+
T Consensus 40 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~----- 114 (350)
T 1rdq_E 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNS----- 114 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS-----
T ss_pred HHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCC-----
Confidence 445566677999999999999999999999999996543 244678999999999999999999999998776
Q ss_pred eEEEEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCcccc
Q 041479 597 FRALVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673 (771)
Q Consensus 597 ~~~lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~ 673 (771)
..|+||||+++|+|.++ ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 115 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~ 191 (350)
T 1rdq_E 115 NLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191 (350)
T ss_dssp EEEEEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccccceec
Confidence 78999999999999776 34689999999999999999999986 9999999999999999999999999999865
Q ss_pred CcccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhc
Q 041479 674 PEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVL 738 (771)
Q Consensus 674 ~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 738 (771)
... ....+||+.|+||| +||++|||++|+.||.+.... .....+..... ..+..+
T Consensus 192 ~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~-~~~~~i~~~~~--~~p~~~ 261 (350)
T 1rdq_E 192 KGR-------TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPI-QIYEKIVSGKV--RFPSHF 261 (350)
T ss_dssp SSC-------BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHCCC--CCCTTC
T ss_pred cCC-------cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHH-HHHHHHHcCCC--CCCCCC
Confidence 432 12357999999999 699999999999999653211 11222333222 233445
Q ss_pred CccccccCcccChhchhhcCC-----HHHHHH
Q 041479 739 DPLFLVGGVQEGEETAEENIK-----KGQIRE 765 (771)
Q Consensus 739 ~~~~~~~~~~cl~~~p~~Rpt-----~~~vl~ 765 (771)
++.+.....+||+.||++||+ +.|+++
T Consensus 262 ~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 262 SSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp CHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred CHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 666666777999999999998 888764
No 156
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=9e-34 Score=301.23 Aligned_cols=223 Identities=20% Similarity=0.155 Sum_probs=177.6
Q ss_pred ccccccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhcc-CCCCceeEEEEeecCCCCCceeEEEE
Q 041479 525 LNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNI-RHRNLVKIITACSTSDFQGNYFRALV 601 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~~~~lv 601 (771)
....+|+|.+|+||+|+++.+++.||||++.... .....++..|+..+.++ +|||||+++++|.+.+ ..|+|
T Consensus 61 ~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~-----~~~lv 135 (311)
T 3p1a_A 61 RLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGG-----ILYLQ 135 (311)
T ss_dssp EEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT-----EEEEE
T ss_pred eeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCC-----EEEEE
Confidence 3446899999999999999888899999985432 33445666777766666 8999999999998776 78999
Q ss_pred EEeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCccc
Q 041479 602 YEFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVM 677 (771)
Q Consensus 602 ~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~ 677 (771)
|||+ +|+|.++ ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 136 ~e~~-~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~ 211 (311)
T 3p1a_A 136 TELC-GPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAG 211 (311)
T ss_dssp EECC-CCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCTTCEECC---
T ss_pred Eecc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccceeeeecccCC
Confidence 9999 6677655 34689999999999999999999996 89999999999999999999999999998654322
Q ss_pred CCcccccccccccccccchh--------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCcccc
Q 041479 678 SSNQCSSVGLKGTVGYATPE--------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFL 743 (771)
Q Consensus 678 ~~~~~~~~~~~gt~~y~aPE--------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 743 (771)
. .....||+.|+||| +||++|||++|..|+.+. .....+.....+......+++.+.
T Consensus 212 ~-----~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~el~~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~ 282 (311)
T 3p1a_A 212 A-----GEVQEGDPRYMAPELLQGSYGTAADVFSLGLTILEVACNMELPHGG----EGWQQLRQGYLPPEFTAGLSSELR 282 (311)
T ss_dssp --------CCCCCGGGCCGGGGGTCCSTHHHHHHHHHHHHHHHHTCCCCSSH----HHHHHHTTTCCCHHHHTTSCHHHH
T ss_pred C-----CcccCCCccccCHhHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCc----cHHHHHhccCCCcccccCCCHHHH
Confidence 1 22346999999999 799999999997765431 223344444445555566677777
Q ss_pred ccCcccChhchhhcCCHHHHHH
Q 041479 744 VGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 744 ~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
....+||+.||++|||+.|+++
T Consensus 283 ~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 283 SVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp HHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHHHHHcCCChhhCcCHHHHHh
Confidence 7778999999999999999985
No 157
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=100.00 E-value=7.5e-33 Score=297.01 Aligned_cols=243 Identities=21% Similarity=0.259 Sum_probs=152.6
Q ss_pred ccceeeeecCC---------CCcEEEEEcCCCCCcccCCccccCCCCCcEEEcCCCcccccCCccccCCCCCCEEecccC
Q 041479 32 CQWLGVTCSLK---------YQRVILLNLSGQNLTGTASPYIGNLTFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSN 102 (771)
Q Consensus 32 c~w~~v~c~~~---------~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 102 (771)
|.|..+.|... ..+++.|+|++|++++..+..|..+++|++|+|++|+|++..|.+|+++++|++|+|++|
T Consensus 33 c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 112 (332)
T 2ft3_A 33 CHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKN 112 (332)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSS
T ss_pred ccCCEEECCCCCccccCCCCCCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCC
Confidence 78999999643 257999999999999888889999999999999999999988999999999999999999
Q ss_pred cCcccCCcccccCCcccccCCccccCCCCCCEEecccccCcCCCCccceeeecccccccccCccccCCCCCCEEecccCc
Q 041479 103 ALQGQIPDSRLILNKLEGNIPSELGSLLKFKGLGLANNYFTGPIPHLNMFQVSVYSLTGSIPIQLLNITSMEYFHVSENQ 182 (771)
Q Consensus 103 ~l~~~~p~~~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~ 182 (771)
+++ .+|..+. ++|++|++++|++++ ..+..|.++++|+.|++++|.
T Consensus 113 ~l~---------------~l~~~~~--~~L~~L~l~~n~i~~-----------------~~~~~~~~l~~L~~L~l~~n~ 158 (332)
T 2ft3_A 113 HLV---------------EIPPNLP--SSLVELRIHDNRIRK-----------------VPKGVFSGLRNMNCIEMGGNP 158 (332)
T ss_dssp CCC---------------SCCSSCC--TTCCEEECCSSCCCC-----------------CCSGGGSSCSSCCEEECCSCC
T ss_pred cCC---------------ccCcccc--ccCCEEECCCCccCc-----------------cCHhHhCCCccCCEEECCCCc
Confidence 986 3444433 567777777776652 223345566666666666666
Q ss_pred Ccc-cCChhhhhCCCCCcEEEeecCcccccCCccccCCCCCCEEEccccccCCCCCcCcccccCCCCCcEEEccCccccc
Q 041479 183 LVG-ELPPHIGFTLPNVRILLLAGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSLSG 261 (771)
Q Consensus 183 l~g-~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~ 261 (771)
++. .+++..+..+ +|+.|++++|++++ +|..+. ++|++|++++|.+++..+..| ..+++
T Consensus 159 l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l---~~l~~------------- 218 (332)
T 2ft3_A 159 LENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLP--ETLNELHLDHNKIQAIELEDL---LRYSK------------- 218 (332)
T ss_dssp CBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSC--SSCSCCBCCSSCCCCCCTTSS---TTCTT-------------
T ss_pred cccCCCCcccccCC-ccCEEECcCCCCCc-cCcccc--CCCCEEECCCCcCCccCHHHh---cCCCC-------------
Confidence 641 1222222233 55555555555553 333222 445555555555554444333 33444
Q ss_pred cCChhhhhcccccceeecccCcCcccCcccccccCCcceEecCCccceeccCccccCCCCCCEEEccCCcccccCCcccc
Q 041479 262 TLPNSLANFSSHLRYLYMSANPISGSIPTEIGNLKNLIIIAIEKFILIRNIPISVGYLLKLQVLSLFENNISREIPSSLG 341 (771)
Q Consensus 262 ~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 341 (771)
|++|++++|++++..+..|..+++|+.|++++|.+. .+|..+..+++|+.|++++|+++...+..|.
T Consensus 219 ------------L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~ 285 (332)
T 2ft3_A 219 ------------LYRLGLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFC 285 (332)
T ss_dssp ------------CSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSS
T ss_pred ------------CCEEECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHcc
Confidence 455555555554444444555555555555555443 3444555555666666666666554444444
No 158
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.1e-33 Score=303.52 Aligned_cols=236 Identities=20% Similarity=0.309 Sum_probs=180.0
Q ss_pred cccccccccccceEEEEEecCCC----eEEEEEEeeccc-hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeE
Q 041479 524 LLNVSYESLVKATVYKGILDLDQ----TFIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFR 598 (771)
Q Consensus 524 ~~~~~l~~~~~~~Vy~~~~~~~~----~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 598 (771)
.....+|+|.+|+||+|+++.++ ..||||++.... .....++.+|++++++++||||+++++++.+.+ ..
T Consensus 47 ~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~ 121 (333)
T 1mqb_A 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYK-----PM 121 (333)
T ss_dssp EEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSS-----SE
T ss_pred hcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCC-----Cc
Confidence 34456899999999999987543 469999997543 345568999999999999999999999987765 67
Q ss_pred EEEEEeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccC
Q 041479 599 ALVYEFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIP 674 (771)
Q Consensus 599 ~lv~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~ 674 (771)
++||||+++|+|.++ ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 122 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~ 198 (333)
T 1mqb_A 122 MIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVLE 198 (333)
T ss_dssp EEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCCC-----
T ss_pred EEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCCcchhhc
Confidence 999999999999876 24689999999999999999999996 89999999999999999999999999998765
Q ss_pred cccCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhhhc
Q 041479 675 EVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQVL 738 (771)
Q Consensus 675 ~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 738 (771)
..... ........+|+.|+||| +||++||+++ |+.||.+... ..+.+.............+
T Consensus 199 ~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~--~~~~~~~~~~~~~~~~~~~ 275 (333)
T 1mqb_A 199 DDPEA-TYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSN--HEVMKAINDGFRLPTPMDC 275 (333)
T ss_dssp -------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH--HHHHHHHHTTCCCCCCTTC
T ss_pred ccccc-ccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCH--HHHHHHHHCCCcCCCcccC
Confidence 43211 11222345688999999 6999999999 9999975422 1233333333332333445
Q ss_pred CccccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 739 DPLFLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 739 ~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
++.+.....+||+.||++|||+.++++.|+++
T Consensus 276 ~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~ 307 (333)
T 1mqb_A 276 PSAIYQLMMQCWQQERARRPKFADIVSILDKL 307 (333)
T ss_dssp BHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 55666677799999999999999999999876
No 159
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=6.2e-34 Score=330.14 Aligned_cols=232 Identities=21% Similarity=0.225 Sum_probs=184.9
Q ss_pred ccccccccceEEEEEec--CCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEE
Q 041479 527 VSYESLVKATVYKGILD--LDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~--~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
..+|+|.+|+||+|.+. ..++.||||+++... ....+++.+|++++++++|||||++++++... ..++||
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~------~~~lv~ 448 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAE------SWMLVM 448 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEESS------SEEEEE
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC------CEEEEE
Confidence 36899999999999654 456799999997543 34468899999999999999999999998654 368999
Q ss_pred EeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCC
Q 041479 603 EFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSS 679 (771)
Q Consensus 603 e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 679 (771)
|||++|+|.++ ...+++.++..|+.||+.||+|||+. +|+||||||+|||++.++.+||+|||+|+........
T Consensus 449 E~~~~g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 525 (635)
T 4fl3_A 449 EMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY 525 (635)
T ss_dssp ECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC----
T ss_pred EccCCCCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccc
Confidence 99999999876 44689999999999999999999996 9999999999999999999999999999876543221
Q ss_pred cccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhhhcCcccc
Q 041479 680 NQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFL 743 (771)
Q Consensus 680 ~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 743 (771)
........||+.|+||| |||++|||++ |+.||.+... ..+.+.+........+..+++.+.
T Consensus 526 -~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~--~~~~~~i~~~~~~~~p~~~~~~l~ 602 (635)
T 4fl3_A 526 -YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG--SEVTAMLEKGERMGCPAGCPREMY 602 (635)
T ss_dssp ----------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH--HHHHHHHHTTCCCCCCTTCCHHHH
T ss_pred -cccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHHcCCCCCCCCCCCHHHH
Confidence 11223345788999999 7999999999 9999976422 234444444444445556667777
Q ss_pred ccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 744 VGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 744 ~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
.++.+||+.||++|||+.+|++.|+++
T Consensus 603 ~li~~cl~~dP~~RPs~~~l~~~L~~~ 629 (635)
T 4fl3_A 603 DLMNLCWTYDVENRPGFAAVELRLRNY 629 (635)
T ss_dssp HHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred HHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence 777899999999999999999999875
No 160
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.5e-33 Score=292.48 Aligned_cols=233 Identities=24% Similarity=0.327 Sum_probs=187.6
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
+.....+|+|.+|+||+|++.. ++.||||++..... ..+++.+|++++++++||||+++++++.+.+ ..++||
T Consensus 10 y~~~~~lg~G~~g~V~~~~~~~-~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~lv~ 82 (267)
T 3t9t_A 10 LTFVQEIGSGQFGLVHLGYWLN-KDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQA-----PICLVT 82 (267)
T ss_dssp EEEEEEEEEETTEEEEEEEETT-TEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSS-----SCEEEE
T ss_pred eeeeeEecCCCceeEEEEEecC-CCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCC-----CeEEEE
Confidence 3445568999999999999874 45899999965432 3478999999999999999999999998765 579999
Q ss_pred EeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccC
Q 041479 603 EFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMS 678 (771)
Q Consensus 603 e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 678 (771)
||+++|+|.++ ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 83 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~- 158 (267)
T 3t9t_A 83 EFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQ- 158 (267)
T ss_dssp CCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHH-
T ss_pred eCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEccccccccccccc-
Confidence 99999999876 24588999999999999999999986 89999999999999999999999999998654322
Q ss_pred Ccccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhhhcCccc
Q 041479 679 SNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLF 742 (771)
Q Consensus 679 ~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 742 (771)
........||+.|+||| +|+++|||++ |+.||.+... ....+......+...+...++.+
T Consensus 159 --~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--~~~~~~i~~~~~~~~~~~~~~~l 234 (267)
T 3t9t_A 159 --YTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSN--SEVVEDISTGFRLYKPRLASTHV 234 (267)
T ss_dssp --HHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH--HHHHHHHHTTCCCCCCTTSCHHH
T ss_pred --ccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCH--HHHHHHHhcCCcCCCCccCcHHH
Confidence 11223345788999999 6999999999 8999975321 12333333333333444556666
Q ss_pred cccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 743 LVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 743 ~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
.....+||+.||++|||+.++++.|+++
T Consensus 235 ~~li~~~l~~~p~~Rps~~~ll~~L~~l 262 (267)
T 3t9t_A 235 YQIMNHCWRERPEDRPAFSRLLRQLAEI 262 (267)
T ss_dssp HHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 6677799999999999999999999986
No 161
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=7.9e-34 Score=298.37 Aligned_cols=234 Identities=25% Similarity=0.336 Sum_probs=175.2
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRAL 600 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~l 600 (771)
+.....+|+|.+|+||+|++.. .||||++.... ....+.|.+|++++++++||||+++++++... ..++
T Consensus 26 y~~~~~lG~G~~g~Vy~~~~~~---~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------~~~l 96 (289)
T 3og7_A 26 ITVGQRIGSGSFGTVYKGKWHG---DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAP------QLAI 96 (289)
T ss_dssp CEEEEEEEECSSEEEEEEESSS---EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSS------SCEE
T ss_pred eeeeeEecCCCCeEEEEEEEcC---ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeeccCC------ccEE
Confidence 3445668999999999998643 59999996543 44567899999999999999999999976443 3689
Q ss_pred EEEeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcc
Q 041479 601 VYEFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676 (771)
Q Consensus 601 v~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~ 676 (771)
||||+++++|.++ ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 97 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 173 (289)
T 3og7_A 97 VTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRW 173 (289)
T ss_dssp EEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC--------
T ss_pred EEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccceeccccccc
Confidence 9999999998655 34688999999999999999999996 8999999999999999999999999999865432
Q ss_pred cCCcccccccccccccccchh------------------HHHHHHHHHhCCCCCCccccCCccHHHHHHh-hCCC---ch
Q 041479 677 MSSNQCSSVGLKGTVGYATPE------------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKM-ALPD---QI 734 (771)
Q Consensus 677 ~~~~~~~~~~~~gt~~y~aPE------------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~-~~~~---~~ 734 (771)
.. ........||+.|+||| +|+++|||++|+.||.+..... .+.+.... ..+. ..
T Consensus 174 ~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~ 250 (289)
T 3og7_A 174 SG--SHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRD-QIIEMVGRGSLSPDLSKV 250 (289)
T ss_dssp ------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHH-HHHHHHHHTSCCCCTTSS
T ss_pred cc--cccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHH-HHHHHhcccccCcchhhc
Confidence 21 11223356899999999 6999999999999997643322 23333332 2222 22
Q ss_pred hhhcCccccccCcccChhchhhcCCHHHHHHHHHHhC
Q 041479 735 LQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAIL 771 (771)
Q Consensus 735 ~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~l 771 (771)
...+++.+.....+||+.||++|||+.++++.|+++.
T Consensus 251 ~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~ 287 (289)
T 3og7_A 251 RSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELA 287 (289)
T ss_dssp CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTT
T ss_pred cccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHh
Confidence 3344556666777999999999999999999999874
No 162
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=3.7e-33 Score=296.36 Aligned_cols=237 Identities=20% Similarity=0.249 Sum_probs=178.2
Q ss_pred cccccccccccccceEEEEEecCCCeEEEEEEeecc---chhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeE
Q 041479 522 DLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLH---QRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFR 598 (771)
Q Consensus 522 ~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 598 (771)
.+.....+|+|.+|+||+|+...+++.||||++... .....+++.+|++++++++||||+++++++.+.+ ..
T Consensus 33 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-----~~ 107 (310)
T 2wqm_A 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDN-----EL 107 (310)
T ss_dssp GEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT-----EE
T ss_pred ceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCC-----cE
Confidence 344556789999999999999888889999999653 2445678999999999999999999999998876 78
Q ss_pred EEEEEeccCCCCCCC-------cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCcc
Q 041479 599 ALVYEFMHHGSLESC-------PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTR 671 (771)
Q Consensus 599 ~lv~e~~~~g~L~~~-------~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~ 671 (771)
++||||+++|+|.++ ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 108 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~ 184 (310)
T 2wqm_A 108 NIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLGLGR 184 (310)
T ss_dssp EEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC----
T ss_pred EEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEecccee
Confidence 999999999999765 23488999999999999999999986 99999999999999999999999999998
Q ss_pred ccCcccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHH-HhhCCCchh
Q 041479 672 FIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFV-KMALPDQIL 735 (771)
Q Consensus 672 ~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~-~~~~~~~~~ 735 (771)
....... ......||+.|+||| +|+++|||++|+.||.+.......+.... ....+....
T Consensus 185 ~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (310)
T 2wqm_A 185 FFSSKTT----AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPS 260 (310)
T ss_dssp ------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTCSCCCCT
T ss_pred eecCCCc----cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhcccCCCCcc
Confidence 6543221 122346899999999 69999999999999965322211222222 222333233
Q ss_pred hhcCccccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 736 QVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 736 ~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
..+++.+.....+||..||++|||+.++++.|+++
T Consensus 261 ~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l 295 (310)
T 2wqm_A 261 DHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRM 295 (310)
T ss_dssp TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred cccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHH
Confidence 44566666677799999999999999999999876
No 163
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=1.3e-33 Score=296.97 Aligned_cols=231 Identities=21% Similarity=0.228 Sum_probs=184.0
Q ss_pred cccccccceEEEEEe--cCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEE
Q 041479 528 SYESLVKATVYKGIL--DLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYE 603 (771)
Q Consensus 528 ~l~~~~~~~Vy~~~~--~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e 603 (771)
.+|+|.+|+||+|.+ +.+++.||||++.... ....+++.+|++++++++||||+++++++... ..++|||
T Consensus 24 ~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------~~~lv~e 97 (291)
T 1xbb_A 24 ELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAE------SWMLVME 97 (291)
T ss_dssp EEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESS------SEEEEEE
T ss_pred ccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEECCC------CcEEEEE
Confidence 689999999999954 5567899999996543 33467899999999999999999999998433 4689999
Q ss_pred eccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCc
Q 041479 604 FMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSN 680 (771)
Q Consensus 604 ~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 680 (771)
|+++|+|.++ ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 98 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~- 173 (291)
T 1xbb_A 98 MAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENY- 173 (291)
T ss_dssp CCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSE-
T ss_pred eCCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCc-
Confidence 9999999876 34588999999999999999999996 9999999999999999999999999999866443221
Q ss_pred ccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhhhcCccccc
Q 041479 681 QCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFLV 744 (771)
Q Consensus 681 ~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 744 (771)
........||+.|+||| +|+++|||++ |+.||.+... ....+......+...+..+++.+..
T Consensus 174 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~ 251 (291)
T 1xbb_A 174 YKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG--SEVTAMLEKGERMGCPAGCPREMYD 251 (291)
T ss_dssp EEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCH--HHHHHHHHTTCCCCCCTTCCHHHHH
T ss_pred ccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCH--HHHHHHHHcCCCCCCCCCCCHHHHH
Confidence 11122334678999999 6999999999 9999976422 2234444444334445556667777
Q ss_pred cCcccChhchhhcCCHHHHHHHHHHh
Q 041479 745 GGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 745 ~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
...+||+.||++|||+.++++.|+++
T Consensus 252 li~~~l~~dp~~Rps~~~l~~~L~~~ 277 (291)
T 1xbb_A 252 LMNLCWTYDVENRPGFAAVELRLRNY 277 (291)
T ss_dssp HHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred HHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 77899999999999999999999986
No 164
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=1.3e-33 Score=312.44 Aligned_cols=228 Identities=20% Similarity=0.231 Sum_probs=175.2
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccc--------hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCC
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--------RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQG 594 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--------~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~ 594 (771)
+.....+|+|.+|+||+|+++.+++.||||++.... ......+.+|++++++++|||||++++++...
T Consensus 137 y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~---- 212 (419)
T 3i6u_A 137 YIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE---- 212 (419)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEESS----
T ss_pred EEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEecC----
Confidence 334456899999999999999999999999996542 11223588999999999999999999997543
Q ss_pred ceeEEEEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCC---CceEEeccc
Q 041479 595 NYFRALVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDND---MTAHMGDFG 668 (771)
Q Consensus 595 ~~~~~lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~---~~~kl~DfG 668 (771)
..|+|||||++|+|.++ ...+++.++..++.|++.||+|||+. +|+||||||+|||++.+ +.+||+|||
T Consensus 213 --~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl~DFG 287 (419)
T 3i6u_A 213 --DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFG 287 (419)
T ss_dssp --EEEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEECCSS
T ss_pred --ceEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEEeecc
Confidence 46899999999999776 45689999999999999999999986 89999999999999754 459999999
Q ss_pred CccccCcccCCcccccccccccccccchh------------------HHHHHHHHHhCCCCCCccccCCccHHHHHHh-h
Q 041479 669 LTRFIPEVMSSNQCSSVGLKGTVGYATPE------------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKM-A 729 (771)
Q Consensus 669 la~~~~~~~~~~~~~~~~~~gt~~y~aPE------------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~-~ 729 (771)
+|+...... .....+||+.|+||| +||++|||++|+.||.+..... .+.+.... .
T Consensus 288 ~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~-~~~~~i~~~~ 361 (419)
T 3i6u_A 288 HSKILGETS-----LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV-SLKDQITSGK 361 (419)
T ss_dssp TTTSCC----------------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSC-CHHHHHHTTC
T ss_pred cceecCCCc-----cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchH-HHHHHHhcCC
Confidence 998765422 122457999999999 6999999999999997643332 23333333 2
Q ss_pred CC--CchhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 730 LP--DQILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 730 ~~--~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
.+ ......+++.+.....+||+.||++|||+.|+++
T Consensus 362 ~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 362 YNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp CCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred CCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 22 2233445666666777999999999999999986
No 165
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=9.1e-34 Score=301.78 Aligned_cols=239 Identities=22% Similarity=0.290 Sum_probs=190.2
Q ss_pred ccccccccccccceEEEEEe-----cCCCeEEEEEEeeccc-hhhHHHHHHHHHHHhcc-CCCCceeEEEEeecCCCCCc
Q 041479 523 LLLNVSYESLVKATVYKGIL-----DLDQTFIAVKVLFLHQ-RGALKSFMAECQALRNI-RHRNLVKIITACSTSDFQGN 595 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~-----~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~ 595 (771)
+.....+|+|.+|+||+|++ ..+++.||||++.... ....+.+.+|+++++++ +||||+++++++...+.
T Consensus 29 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~--- 105 (316)
T 2xir_A 29 LKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG--- 105 (316)
T ss_dssp EEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTS---
T ss_pred eeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCC---
Confidence 44456789999999999985 3456899999996543 34457899999999999 79999999999876542
Q ss_pred eeEEEEEEeccCCCCCCCcc-------------------cCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeee
Q 041479 596 YFRALVYEFMHHGSLESCPR-------------------ILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLL 656 (771)
Q Consensus 596 ~~~~lv~e~~~~g~L~~~~~-------------------~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl 656 (771)
..++||||+++|+|.++.. .+++..+..++.|++.||+|||+. +|+||||||+||++
T Consensus 106 -~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~ 181 (316)
T 2xir_A 106 -PLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILL 181 (316)
T ss_dssp -CCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEE
T ss_pred -ceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEE
Confidence 4799999999999976511 178899999999999999999996 99999999999999
Q ss_pred CCCCceEEecccCccccCcccCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCc
Q 041479 657 DNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGL 720 (771)
Q Consensus 657 ~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~ 720 (771)
+.++.+||+|||+++....... ........||+.|+||| +||++|||+| |+.||.+.... .
T Consensus 182 ~~~~~~kl~Dfg~~~~~~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~-~ 258 (316)
T 2xir_A 182 SEKNVVKICDFGLARDIYKDPD--YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID-E 258 (316)
T ss_dssp CGGGCEEECCCGGGSCTTTCTT--SEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCS-H
T ss_pred CCCCCEEECCCccccccccCcc--ceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchh-H
Confidence 9999999999999986644322 12223456889999999 6999999998 99999764322 2
Q ss_pred cHHHHHHhhCCCchhhhcCccccccCcccChhchhhcCCHHHHHHHHHHhC
Q 041479 721 DLHNFVKMALPDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAIL 771 (771)
Q Consensus 721 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~l 771 (771)
.+........+...+..+++.+.....+||+.||++|||+.|+++.|++++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 309 (316)
T 2xir_A 259 EFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 309 (316)
T ss_dssp HHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHhccCccCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 333444444444445556667777777999999999999999999999864
No 166
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=1.3e-33 Score=299.73 Aligned_cols=238 Identities=18% Similarity=0.178 Sum_probs=185.6
Q ss_pred ccccccccccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCcee
Q 041479 521 KDLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYF 597 (771)
Q Consensus 521 ~~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 597 (771)
..+.....+|+|.+|+||+|++..+++.||||++.... ....+.+.+|+.++++++||||+++++++...+ .
T Consensus 34 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~-----~ 108 (309)
T 2h34_A 34 GPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDG-----Q 108 (309)
T ss_dssp CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETT-----E
T ss_pred ccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCC-----e
Confidence 34555667899999999999999999999999996543 334578999999999999999999999998776 7
Q ss_pred EEEEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccC
Q 041479 598 RALVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIP 674 (771)
Q Consensus 598 ~~lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~ 674 (771)
.|+||||+++++|.++ ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 109 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 185 (309)
T 2h34_A 109 LYVDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFGIASATT 185 (309)
T ss_dssp EEEEEECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCCC-----
T ss_pred EEEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCccCcccc
Confidence 8999999999999876 34589999999999999999999996 89999999999999999999999999998654
Q ss_pred cccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCC--Cchhhh
Q 041479 675 EVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALP--DQILQV 737 (771)
Q Consensus 675 ~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~--~~~~~~ 737 (771)
.... .......||+.|+||| +|+++|||++|+.||.+.... .+........+ ......
T Consensus 186 ~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~ 260 (309)
T 2h34_A 186 DEKL---TQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLS--VMGAHINQAIPRPSTVRPG 260 (309)
T ss_dssp --------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHH--HHHHHHHSCCCCGGGTSTT
T ss_pred cccc---ccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHH--HHHHHhccCCCCccccCCC
Confidence 3221 1122346899999999 699999999999999753211 22222232222 223344
Q ss_pred cCccccccCcccChhchhhcC-CHHHHHHHHHHhC
Q 041479 738 LDPLFLVGGVQEGEETAEENI-KKGQIRESLIAIL 771 (771)
Q Consensus 738 ~~~~~~~~~~~cl~~~p~~Rp-t~~~vl~~L~~~l 771 (771)
+++.+.....+||+.||++|| |+.++++.|++++
T Consensus 261 ~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l 295 (309)
T 2h34_A 261 IPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAAL 295 (309)
T ss_dssp CCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHH
Confidence 566666677799999999999 9999999998764
No 167
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=2.7e-34 Score=305.27 Aligned_cols=237 Identities=20% Similarity=0.222 Sum_probs=176.3
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRA 599 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 599 (771)
+.....+|+|.+|+||+|++..+++.||||++.... ....+.+.+|++++++++|||||++++++...... ....|
T Consensus 14 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~-~~~~~ 92 (311)
T 3ork_A 14 YELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPA-GPLPY 92 (311)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETT-EEEEE
T ss_pred EEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCC-CcccE
Confidence 444566899999999999999999999999996542 34456899999999999999999999998765421 12459
Q ss_pred EEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcc
Q 041479 600 LVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676 (771)
Q Consensus 600 lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~ 676 (771)
+||||+++|+|.++ ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 93 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~ 169 (311)
T 3ork_A 93 IVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADS 169 (311)
T ss_dssp EEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCSCC------
T ss_pred EEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeeccCccccccc
Confidence 99999999999876 34689999999999999999999986 8999999999999999999999999999866543
Q ss_pred cCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCC--CchhhhcC
Q 041479 677 MSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALP--DQILQVLD 739 (771)
Q Consensus 677 ~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 739 (771)
... ........||+.|+||| +||++|||++|+.||.+...... .......... ......++
T Consensus 170 ~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 247 (311)
T 3ork_A 170 GNS-VTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSV-AYQHVREDPIPPSARHEGLS 247 (311)
T ss_dssp -------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHCCCCCHHHHSTTCC
T ss_pred ccc-cccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHH-HHHHhcCCCCCcccccCCCC
Confidence 221 11223456899999999 69999999999999975322111 1222222221 11223455
Q ss_pred ccccccCcccChhchhhcCCHHHHHH
Q 041479 740 PLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 740 ~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
+.+.....+||+.||++||++.++++
T Consensus 248 ~~l~~li~~~l~~dP~~R~~~~~~l~ 273 (311)
T 3ork_A 248 ADLDAVVLKALAKNPENRYQTAAEMR 273 (311)
T ss_dssp HHHHHHHHHHTCSSGGGSCSSHHHHH
T ss_pred HHHHHHHHHHHhcCHhhChhhHHHHH
Confidence 66666777999999999997776653
No 168
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=1e-33 Score=302.94 Aligned_cols=235 Identities=20% Similarity=0.250 Sum_probs=183.1
Q ss_pred ccccccccccccceEEEEEecCCCeE----EEEEEeecc-chhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCcee
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTF----IAVKVLFLH-QRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYF 597 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~----vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 597 (771)
+.....+|+|.+|+||+|++..+++. ||+|.+... .....+.+.+|+.++++++||||+++++++....
T Consensus 17 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~------ 90 (327)
T 3lzb_A 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST------ 90 (327)
T ss_dssp EEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS------
T ss_pred ceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC------
Confidence 44456789999999999998877654 466666433 2345688999999999999999999999998654
Q ss_pred EEEEEEeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCcccc
Q 041479 598 RALVYEFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673 (771)
Q Consensus 598 ~~lv~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~ 673 (771)
.++|+||+++|+|.++ ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 91 ~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~ 167 (327)
T 3lzb_A 91 VQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLL 167 (327)
T ss_dssp EEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTTC----
T ss_pred ceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCcceeEc
Confidence 5899999999999776 34588999999999999999999996 9999999999999999999999999999876
Q ss_pred CcccCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhhh
Q 041479 674 PEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQV 737 (771)
Q Consensus 674 ~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 737 (771)
..... ........||+.|+||| +||++|||++ |+.||.+... ..+.+..........+..
T Consensus 168 ~~~~~--~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~ 243 (327)
T 3lzb_A 168 GAEEK--EYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA--SEISSILEKGERLPQPPI 243 (327)
T ss_dssp --------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCG--GGHHHHHHTTCCCCCCTT
T ss_pred cCccc--cccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCH--HHHHHHHHcCCCCCCCcc
Confidence 44322 12223345788999999 6999999999 9999976432 335555555544444555
Q ss_pred cCccccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 738 LDPLFLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 738 ~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
+++.+.....+||+.||++|||+.|+++.|+++
T Consensus 244 ~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~ 276 (327)
T 3lzb_A 244 CTIDVYMIMRKCWMIDADSRPKFRELIIEFSKM 276 (327)
T ss_dssp BCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 666677777799999999999999999999875
No 169
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=1.7e-33 Score=296.65 Aligned_cols=228 Identities=20% Similarity=0.242 Sum_probs=181.6
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEec
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFM 605 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~~ 605 (771)
...+|+|.+|+||+|++..+++.||||.+........+.+.+|+.+++.++||||+++++++.+.+ ..++||||+
T Consensus 27 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-----~~~lv~e~~ 101 (295)
T 2clq_A 27 RVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENG-----FIKIFMEQV 101 (295)
T ss_dssp BCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETT-----EEEEEEECC
T ss_pred cEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCC-----cEEEEEEeC
Confidence 346899999999999999999999999997766666788999999999999999999999998776 789999999
Q ss_pred cCCCCCCCc------ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCC-CCceEEecccCccccCcccC
Q 041479 606 HHGSLESCP------RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN-DMTAHMGDFGLTRFIPEVMS 678 (771)
Q Consensus 606 ~~g~L~~~~------~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~-~~~~kl~DfGla~~~~~~~~ 678 (771)
++|+|.++. ..+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||+++.......
T Consensus 102 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~ 178 (295)
T 2clq_A 102 PGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP 178 (295)
T ss_dssp SEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTTTCEESCC---
T ss_pred CCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecccccccCCCCC
Confidence 999997661 2456888899999999999999986 9999999999999987 89999999999986543221
Q ss_pred Ccccccccccccccccchh-----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCcc
Q 041479 679 SNQCSSVGLKGTVGYATPE-----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPL 741 (771)
Q Consensus 679 ~~~~~~~~~~gt~~y~aPE-----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 741 (771)
......||+.|+||| +|+++|||++|+.||.+....................+..+++.
T Consensus 179 ----~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (295)
T 2clq_A 179 ----CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAE 254 (295)
T ss_dssp ------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCCCCCCTTSCHH
T ss_pred ----cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhccccccccccccCCHH
Confidence 122346899999999 69999999999999965322111122222223334445556666
Q ss_pred ccccCcccChhchhhcCCHHHHHH
Q 041479 742 FLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 742 ~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
+.....+||+.||++|||+.++++
T Consensus 255 ~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 255 AKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp HHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred HHHHHHHHccCChhhCCCHHHHhc
Confidence 667777999999999999999985
No 170
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=3.6e-33 Score=291.68 Aligned_cols=233 Identities=23% Similarity=0.328 Sum_probs=186.7
Q ss_pred cccccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEE
Q 041479 522 DLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALV 601 (771)
Q Consensus 522 ~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv 601 (771)
.+.....+|+|.+|+||+|++.. ++.||||++.... ...+.+.+|++++++++||||+++++++... ..++|
T Consensus 14 ~y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~------~~~~v 85 (279)
T 1qpc_A 14 TLKLVERLGAGQFGEVWMGYYNG-HTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQE------PIYII 85 (279)
T ss_dssp GEEEEEEEEEETTEEEEEEEETT-TEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSS------SCEEE
T ss_pred hhhheeeecCCCCeEEEEEEEcC-CcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcCC------CcEEE
Confidence 34455678999999999999864 4589999996543 2457899999999999999999999997643 36899
Q ss_pred EEeccCCCCCCCcc-----cCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcc
Q 041479 602 YEFMHHGSLESCPR-----ILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676 (771)
Q Consensus 602 ~e~~~~g~L~~~~~-----~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~ 676 (771)
|||+++|+|.++.. .+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 86 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~ 162 (279)
T 1qpc_A 86 TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFGLARLIEDN 162 (279)
T ss_dssp EECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEECSSS
T ss_pred EecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCcccccccCc
Confidence 99999999987632 588999999999999999999986 9999999999999999999999999999866543
Q ss_pred cCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhhhcCc
Q 041479 677 MSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQVLDP 740 (771)
Q Consensus 677 ~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 740 (771)
. ........|++.|+||| +|+++|||++ |+.||.+... ....+..........+..+++
T Consensus 163 ~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 237 (279)
T 1qpc_A 163 E---YTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTN--PEVIQNLERGYRMVRPDNCPE 237 (279)
T ss_dssp C---EECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCH--HHHHHHHHTTCCCCCCTTCCH
T ss_pred c---cccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCH--HHHHHHHhcccCCCCcccccH
Confidence 2 12223345788999999 6999999999 9999975322 123333333333333445566
Q ss_pred cccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 741 LFLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 741 ~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
.+.....+|++.||++|||+.++++.|+++
T Consensus 238 ~l~~li~~~l~~~p~~Rps~~~l~~~l~~~ 267 (279)
T 1qpc_A 238 ELYQLMRLCWKERPEDRPTFDYLRSVLEDF 267 (279)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhccChhhCCCHHHHHHHHHHH
Confidence 666677799999999999999999999876
No 171
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=2.6e-33 Score=299.18 Aligned_cols=237 Identities=20% Similarity=0.246 Sum_probs=186.6
Q ss_pred ccccccccccccceEEEEEec-----CCCeEEEEEEeeccc-hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCce
Q 041479 523 LLLNVSYESLVKATVYKGILD-----LDQTFIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNY 596 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~-----~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~ 596 (771)
+.....+|+|.+|+||+|+++ .+++.||||++.... .....++.+|++++++++||||+++++++.+.+
T Consensus 27 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~----- 101 (322)
T 1p4o_A 27 ITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ----- 101 (322)
T ss_dssp EEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSS-----
T ss_pred eeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCC-----
Confidence 344566899999999999887 346789999996543 344567999999999999999999999987765
Q ss_pred eEEEEEEeccCCCCCCCc-------------ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceE
Q 041479 597 FRALVYEFMHHGSLESCP-------------RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAH 663 (771)
Q Consensus 597 ~~~lv~e~~~~g~L~~~~-------------~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~k 663 (771)
..++||||+++|+|.++. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+|
T Consensus 102 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~~~~~~k 178 (322)
T 1p4o_A 102 PTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVK 178 (322)
T ss_dssp SCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTTCCEE
T ss_pred ccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEcCCCeEE
Confidence 579999999999997762 3458889999999999999999996 999999999999999999999
Q ss_pred EecccCccccCcccCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHH
Q 041479 664 MGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVK 727 (771)
Q Consensus 664 l~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~ 727 (771)
|+|||+++....... ........||+.|+||| +|+++|||++ |+.||.+... ........
T Consensus 179 l~Dfg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~--~~~~~~~~ 254 (322)
T 1p4o_A 179 IGDFGMTRDIYETDY--YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSN--EQVLRFVM 254 (322)
T ss_dssp ECCTTCCCGGGGGGC--EEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCH--HHHHHHHH
T ss_pred ECcCccccccccccc--cccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCH--HHHHHHHH
Confidence 999999986544322 11222345789999999 6999999999 8999865321 12222222
Q ss_pred hhCCCchhhhcCccccccCcccChhchhhcCCHHHHHHHHHHhC
Q 041479 728 MALPDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAIL 771 (771)
Q Consensus 728 ~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~l 771 (771)
..........+++.+.....+||+.||++|||+.|+++.|++++
T Consensus 255 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~ 298 (322)
T 1p4o_A 255 EGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEM 298 (322)
T ss_dssp TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGS
T ss_pred cCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhh
Confidence 22222233445555666677999999999999999999998763
No 172
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=2.1e-33 Score=292.83 Aligned_cols=228 Identities=22% Similarity=0.232 Sum_probs=165.9
Q ss_pred ccccccccccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCcee
Q 041479 521 KDLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYF 597 (771)
Q Consensus 521 ~~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 597 (771)
..+.....+|+|.+|+||+|++..+++.||||++.... ....+.+.+|++++++++||||+++++++.+.+ .
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~ 87 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKD-----E 87 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSS-----C
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCC-----e
Confidence 34555667899999999999999999999999996542 334568899999999999999999999998766 6
Q ss_pred EEEEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccC
Q 041479 598 RALVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIP 674 (771)
Q Consensus 598 ~~lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~ 674 (771)
.++||||+ ++++.+. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 88 ~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 163 (275)
T 2eue_A 88 IIMVIEYA-GNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMT 163 (275)
T ss_dssp EEEEEECC-CEEHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSSCC----
T ss_pred EEEEehhc-CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecccceecc
Confidence 79999999 5566544 34689999999999999999999996 89999999999999999999999999998654
Q ss_pred cccCCcccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhc
Q 041479 675 EVMSSNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVL 738 (771)
Q Consensus 675 ~~~~~~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 738 (771)
.... ....+||+.|+||| +||++|||++|+.||.+... .......... ....++.+
T Consensus 164 ~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~--~~~~~~~~~~-~~~~~~~~ 235 (275)
T 2eue_A 164 DGNF-----LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESI--PVLFKNISNG-VYTLPKFL 235 (275)
T ss_dssp ----------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHT-CCCCCTTS
T ss_pred Cccc-----ccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHhC-CCCCCccC
Confidence 3221 22346899999999 69999999999999975321 1111221111 22334455
Q ss_pred CccccccCcccChhchhhcCCHHHHHH
Q 041479 739 DPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 739 ~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
++.+.....+||+.||++|||+.|+++
T Consensus 236 ~~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 236 SPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp CHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred CHHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 666667777999999999999999974
No 173
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=9.1e-33 Score=292.88 Aligned_cols=231 Identities=28% Similarity=0.377 Sum_probs=180.8
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeecc----chhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEE
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLH----QRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~----~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
..+|+|.+|+||+|++ +++.||||++... .....+.+.+|++++++++||||+++++++.+.+ ..++||
T Consensus 37 ~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-----~~~lv~ 109 (307)
T 2nru_A 37 NKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGD-----DLCLVY 109 (307)
T ss_dssp CEEEECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-----SCEEEE
T ss_pred CccccCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCC-----ceEEEE
Confidence 5689999999999987 3558999999643 2345678999999999999999999999998766 679999
Q ss_pred EeccCCCCCCC------cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcc
Q 041479 603 EFMHHGSLESC------PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676 (771)
Q Consensus 603 e~~~~g~L~~~------~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~ 676 (771)
||+++|+|.++ ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 110 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~ 186 (307)
T 2nru_A 110 VYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKF 186 (307)
T ss_dssp ECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECCSC
T ss_pred EecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEcCCCcEEEeecccccccccc
Confidence 99999999765 23589999999999999999999986 9999999999999999999999999999865432
Q ss_pred cCCcccccccccccccccchh--------------HHHHHHHHHhCCCCCCccccCCccHHHHHHh--hCCCchhhhc--
Q 041479 677 MSSNQCSSVGLKGTVGYATPE--------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKM--ALPDQILQVL-- 738 (771)
Q Consensus 677 ~~~~~~~~~~~~gt~~y~aPE--------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~--~~~~~~~~~~-- 738 (771)
.. ........||+.|+||| +|+++|||++|+.||.+...... +..+... .......+.+
T Consensus 187 ~~--~~~~~~~~g~~~y~aPE~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 263 (307)
T 2nru_A 187 AQ--TVMTSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQL-LLDIKEEIEDEEKTIEDYIDK 263 (307)
T ss_dssp SS--CEECSSCCSCGGGCCHHHHTTEECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSB-TTHHHHHHHTTSCCHHHHSCS
T ss_pred cc--cccccccCCCcCcCChHHhcCCCCccchhHHHHHHHHHHHHCCCCcccCcchHH-HHHHHHHhhhhhhhhhhhccc
Confidence 21 11223356899999999 79999999999999976432221 2122111 1111122222
Q ss_pred ---------CccccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 739 ---------DPLFLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 739 ---------~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
...+.....+||+.||++|||+.++++.|+++
T Consensus 264 ~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l 304 (307)
T 2nru_A 264 KMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEM 304 (307)
T ss_dssp SCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred cccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence 22333455699999999999999999999986
No 174
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=2e-33 Score=299.24 Aligned_cols=231 Identities=23% Similarity=0.224 Sum_probs=177.7
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhcc-CCCCceeEEEEeecCCCCCceeEEEEEEec
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNI-RHRNLVKIITACSTSDFQGNYFRALVYEFM 605 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~~~~lv~e~~ 605 (771)
..+|+|.+|+||+|++..+++.||||++........+.+.+|++++.++ +||||+++++++.+.+ ..|+||||+
T Consensus 19 ~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~-----~~~lv~e~~ 93 (316)
T 2ac3_A 19 DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEED-----RFYLVFEKM 93 (316)
T ss_dssp CCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT-----EEEEEEECC
T ss_pred ceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCC-----EEEEEEEcC
Confidence 4589999999999999988899999999766555678899999999985 7999999999998876 789999999
Q ss_pred cCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCc---eEEecccCccccCcccCC
Q 041479 606 HHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMT---AHMGDFGLTRFIPEVMSS 679 (771)
Q Consensus 606 ~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~---~kl~DfGla~~~~~~~~~ 679 (771)
++|+|.++ ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||+++........
T Consensus 94 ~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~ 170 (316)
T 2ac3_A 94 RGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDC 170 (316)
T ss_dssp TTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTTCCC--------
T ss_pred CCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCcc
Confidence 99999776 34689999999999999999999996 9999999999999987765 999999999865432111
Q ss_pred ---cccccccccccccccchh--------------------HHHHHHHHHhCCCCCCccccCC-------------ccHH
Q 041479 680 ---NQCSSVGLKGTVGYATPE--------------------YGILLLEIFTGKRPTSDMFTEG-------------LDLH 723 (771)
Q Consensus 680 ---~~~~~~~~~gt~~y~aPE--------------------~Gv~l~el~tg~~P~~~~~~~~-------------~~~~ 723 (771)
........+||+.|+||| +||++|||++|+.||.+..... ..+.
T Consensus 171 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~ 250 (316)
T 2ac3_A 171 SPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLF 250 (316)
T ss_dssp -----------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHH
T ss_pred ccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHH
Confidence 011122356999999999 5999999999999997542211 0111
Q ss_pred H-HHHhhCC--CchhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 724 N-FVKMALP--DQILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 724 ~-~~~~~~~--~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
+ +...... ......+++.+.....+||+.||++|||+.|+++
T Consensus 251 ~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 295 (316)
T 2ac3_A 251 ESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295 (316)
T ss_dssp HHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhc
Confidence 1 2222221 1222345566666777999999999999999986
No 175
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=2.7e-33 Score=295.53 Aligned_cols=237 Identities=14% Similarity=0.160 Sum_probs=187.2
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhcc-CCCCceeEEEEeecCCCCCceeEEEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNI-RHRNLVKIITACSTSDFQGNYFRALV 601 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~~~~lv 601 (771)
+.....+|+|.+|+||+|++..+++.||||++.... ..+.+.+|+++++++ +|+||+++++++.+.. ..++|
T Consensus 12 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~-----~~~lv 84 (298)
T 1csn_A 12 YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGL-----HNVLV 84 (298)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETT-----EEEEE
T ss_pred eEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCc-----eeEEE
Confidence 344556899999999999998899999999986443 235688899999999 7999999999987766 78999
Q ss_pred EEeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCc-----eEEecccCccc
Q 041479 602 YEFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMT-----AHMGDFGLTRF 672 (771)
Q Consensus 602 ~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~-----~kl~DfGla~~ 672 (771)
|||+ +|+|.++ ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||+++.
T Consensus 85 ~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~ 160 (298)
T 1csn_A 85 IDLL-GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKF 160 (298)
T ss_dssp EECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEE
T ss_pred EEec-CCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECccccc
Confidence 9999 9999876 33589999999999999999999985 9999999999999987765 99999999987
Q ss_pred cCcccCCcc---cccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCc--cHHHHHHhhCC-
Q 041479 673 IPEVMSSNQ---CSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGL--DLHNFVKMALP- 731 (771)
Q Consensus 673 ~~~~~~~~~---~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~--~~~~~~~~~~~- 731 (771)
......... .......||+.|+||| +||++|||++|+.||.+...... .+........+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 240 (298)
T 1csn_A 161 YRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQST 240 (298)
T ss_dssp SBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHS
T ss_pred cccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCc
Confidence 654322111 1234567999999999 69999999999999976432211 11222222221
Q ss_pred --CchhhhcCccccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 732 --DQILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 732 --~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
......+++.+.....+||+.||++|||+.++++.|+++
T Consensus 241 ~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~ 281 (298)
T 1csn_A 241 PLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKV 281 (298)
T ss_dssp CHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred cHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHH
Confidence 222334566666777799999999999999999999886
No 176
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=2.3e-33 Score=302.60 Aligned_cols=229 Identities=19% Similarity=0.195 Sum_probs=183.5
Q ss_pred ccccccccccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhcc-CCCCceeEEEEeecCCCCCce
Q 041479 521 KDLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNI-RHRNLVKIITACSTSDFQGNY 596 (771)
Q Consensus 521 ~~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~ 596 (771)
.++.....+|+|.+|+||+|+++.+++.||||++.... ....+.+.+|.+++..+ +||||+++++++.+.+
T Consensus 20 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~----- 94 (353)
T 2i0e_A 20 TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMD----- 94 (353)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSS-----
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCC-----
Confidence 34555667999999999999999989999999997542 34567889999999988 7999999999988776
Q ss_pred eEEEEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCcccc
Q 041479 597 FRALVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673 (771)
Q Consensus 597 ~~~lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~ 673 (771)
..|+||||+++|+|.++ ...+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 95 ~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG~a~~~ 171 (353)
T 2i0e_A 95 RLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEN 171 (353)
T ss_dssp EEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCTTCBCC
T ss_pred EEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCCccccc
Confidence 78999999999999776 34689999999999999999999996 9999999999999999999999999999853
Q ss_pred CcccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhc
Q 041479 674 PEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVL 738 (771)
Q Consensus 674 ~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 738 (771)
.... ......+||+.|+||| +||++|||++|+.||.+.... ..+..+..... ..+..+
T Consensus 172 ~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~-~~~~~i~~~~~--~~p~~~ 244 (353)
T 2i0e_A 172 IWDG----VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDED-ELFQSIMEHNV--AYPKSM 244 (353)
T ss_dssp CCTT----CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHCCC--CCCTTS
T ss_pred ccCC----cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHH-HHHHHHHhCCC--CCCCCC
Confidence 3221 1223467999999999 699999999999999753211 11222222222 233455
Q ss_pred CccccccCcccChhchhhcCC-----HHHHH
Q 041479 739 DPLFLVGGVQEGEETAEENIK-----KGQIR 764 (771)
Q Consensus 739 ~~~~~~~~~~cl~~~p~~Rpt-----~~~vl 764 (771)
++.+.....+||..||++||+ +.+++
T Consensus 245 s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~ 275 (353)
T 2i0e_A 245 SKEAVAICKGLMTKHPGKRLGCGPEGERDIK 275 (353)
T ss_dssp CHHHHHHHHHHTCSCTTSCTTCSTTHHHHHH
T ss_pred CHHHHHHHHHHhhcCHHHcCCCCCCCHHHHh
Confidence 666666777999999999996 46665
No 177
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=3.8e-33 Score=291.59 Aligned_cols=228 Identities=21% Similarity=0.263 Sum_probs=181.7
Q ss_pred ccccccccccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCcee
Q 041479 521 KDLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYF 597 (771)
Q Consensus 521 ~~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 597 (771)
..+.....+|+|.+|+||+|++..+++.||||++.... ....+.+.+|+.++++++||||+++++++.+.+ .
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~ 83 (279)
T 3fdn_A 9 EDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDAT-----R 83 (279)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS-----E
T ss_pred ccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCC-----E
Confidence 44555667999999999999999999999999996543 233567999999999999999999999998776 7
Q ss_pred EEEEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccC
Q 041479 598 RALVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIP 674 (771)
Q Consensus 598 ~~lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~ 674 (771)
.++||||+++|+|.+. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 84 ~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~ 160 (279)
T 3fdn_A 84 VYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFGWSVHAP 160 (279)
T ss_dssp EEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCCEESCC-
T ss_pred EEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEeccccccCC
Confidence 8999999999999766 34688999999999999999999985 99999999999999999999999999986543
Q ss_pred cccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcC
Q 041479 675 EVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLD 739 (771)
Q Consensus 675 ~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 739 (771)
... .....||+.|+||| +|+++|||++|+.||...... ...+.. .......++.++
T Consensus 161 ~~~------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~~-~~~~~~~~~~~~ 231 (279)
T 3fdn_A 161 SSR------RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQ--ETYKRI-SRVEFTFPDFVT 231 (279)
T ss_dssp -------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHH--HHHHHH-HHTCCCCCTTSC
T ss_pred ccc------ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHH--HHHHHH-HhCCCCCCCcCC
Confidence 322 12346899999999 699999999999999753211 111111 112223344455
Q ss_pred ccccccCcccChhchhhcCCHHHHHH
Q 041479 740 PLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 740 ~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
+.+.....+||+.||++|||+.|+++
T Consensus 232 ~~~~~li~~~l~~~p~~Rps~~e~l~ 257 (279)
T 3fdn_A 232 EGARDLISRLLKHNPSQRPMLREVLE 257 (279)
T ss_dssp HHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHHhccChhhCCCHHHHhh
Confidence 66666677999999999999999986
No 178
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=1.2e-33 Score=322.44 Aligned_cols=233 Identities=25% Similarity=0.340 Sum_probs=188.1
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
+.....+|+|.+|+||+|++..+ ..||||++.... ...++|.+|+++|++++|||||++++++.+. ..|+||
T Consensus 269 ~~~~~~lG~G~fg~Vy~~~~~~~-~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~------~~~lv~ 340 (535)
T 2h8h_A 269 LRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEE------PIYIVT 340 (535)
T ss_dssp EEEEEEEEECSSEEEEEEEETTT-EEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSS------SCEEEE
T ss_pred hhhheecccCCCeEEEEEEECCC-ceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEeec------cceEee
Confidence 34455689999999999999865 489999997543 2357899999999999999999999998653 468999
Q ss_pred EeccCCCCCCCc-----ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCccc
Q 041479 603 EFMHHGSLESCP-----RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVM 677 (771)
Q Consensus 603 e~~~~g~L~~~~-----~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~ 677 (771)
|||++|+|.++. ..+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 341 e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 417 (535)
T 2h8h_A 341 EYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNE 417 (535)
T ss_dssp CCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHH
T ss_pred ehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccccceecCCCc
Confidence 999999998772 3488999999999999999999986 89999999999999999999999999998764322
Q ss_pred CCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhhhcCcc
Q 041479 678 SSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPL 741 (771)
Q Consensus 678 ~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 741 (771)
.....+..++..|+||| |||++|||++ |+.||.+... ..+.+.+........+..++..
T Consensus 418 ---~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~--~~~~~~i~~~~~~~~~~~~~~~ 492 (535)
T 2h8h_A 418 ---YTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN--REVLDQVERGYRMPCPPECPES 492 (535)
T ss_dssp ---HHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCH--HHHHHHHHTTCCCCCCTTCCHH
T ss_pred ---eecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHHcCCCCCCCCCCCHH
Confidence 11223345788999999 7999999999 9999976422 1233334444333344455666
Q ss_pred ccccCcccChhchhhcCCHHHHHHHHHHhC
Q 041479 742 FLVGGVQEGEETAEENIKKGQIRESLIAIL 771 (771)
Q Consensus 742 ~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~l 771 (771)
+..++.+||+.||++|||+.+|++.|++++
T Consensus 493 l~~li~~cl~~dP~~RPt~~~l~~~L~~~~ 522 (535)
T 2h8h_A 493 LHDLMCQCWRKEPEERPTFEYLQAFLEDYF 522 (535)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHTSS
T ss_pred HHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 667777999999999999999999999863
No 179
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=3e-33 Score=316.88 Aligned_cols=230 Identities=25% Similarity=0.294 Sum_probs=186.4
Q ss_pred cccccccccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeE
Q 041479 522 DLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFR 598 (771)
Q Consensus 522 ~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 598 (771)
.+.....+|+|.+|+||+|+++.+++.||||++.... ....+.+.+|++++++++|||||++++++.+.+ ..
T Consensus 185 ~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~-----~l 259 (576)
T 2acx_A 185 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKD-----AL 259 (576)
T ss_dssp GEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS-----EE
T ss_pred ceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCC-----EE
Confidence 3445567899999999999999999999999996542 334567899999999999999999999998776 78
Q ss_pred EEEEEeccCCCCCCC-----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCcccc
Q 041479 599 ALVYEFMHHGSLESC-----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673 (771)
Q Consensus 599 ~lv~e~~~~g~L~~~-----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~ 673 (771)
|+|||||++|+|.++ ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+|+..
T Consensus 260 ~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFGla~~~ 336 (576)
T 2acx_A 260 CLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHV 336 (576)
T ss_dssp EEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecccceec
Confidence 999999999999765 22489999999999999999999996 9999999999999999999999999999866
Q ss_pred CcccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCC--ccHHHHHHhhCCCchhh
Q 041479 674 PEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEG--LDLHNFVKMALPDQILQ 736 (771)
Q Consensus 674 ~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~--~~~~~~~~~~~~~~~~~ 736 (771)
..... ....+||+.|+||| +||++|||++|+.||.+..... ..+... ....+...+.
T Consensus 337 ~~~~~-----~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~-i~~~~~~~p~ 410 (576)
T 2acx_A 337 PEGQT-----IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERL-VKEVPEEYSE 410 (576)
T ss_dssp CTTCC-----EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHH-HHHCCCCCCT
T ss_pred ccCcc-----ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHH-hhcccccCCc
Confidence 44321 22357999999999 6999999999999997542211 112222 2233444455
Q ss_pred hcCccccccCcccChhchhhcC-----CHHHHHH
Q 041479 737 VLDPLFLVGGVQEGEETAEENI-----KKGQIRE 765 (771)
Q Consensus 737 ~~~~~~~~~~~~cl~~~p~~Rp-----t~~~vl~ 765 (771)
.+++.+.....+||+.||++|| ++.|+++
T Consensus 411 ~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~ 444 (576)
T 2acx_A 411 RFSPQARSLCSQLLCKDPAERLGCRGGSAREVKE 444 (576)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHT
T ss_pred cCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHh
Confidence 6677777777899999999999 7788864
No 180
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.6e-33 Score=308.02 Aligned_cols=238 Identities=23% Similarity=0.257 Sum_probs=185.0
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccc-hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALV 601 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv 601 (771)
+.....+|+|.+|+||+|+++.+++.||||++.... ....+.+.+|++++++++|||||++++++.+.+.. ..++|
T Consensus 11 y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~---~~~lv 87 (396)
T 4eut_A 11 WLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTR---HKVLI 87 (396)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTC---CEEEE
T ss_pred eEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCC---eeEEE
Confidence 344556899999999999999989999999996543 34467889999999999999999999998765422 56999
Q ss_pred EEeccCCCCCCCcc------cCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeee----CCCCceEEecccCcc
Q 041479 602 YEFMHHGSLESCPR------ILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLL----DNDMTAHMGDFGLTR 671 (771)
Q Consensus 602 ~e~~~~g~L~~~~~------~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl----~~~~~~kl~DfGla~ 671 (771)
|||+++|+|.++.. .+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++
T Consensus 88 ~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~ 164 (396)
T 4eut_A 88 MEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAR 164 (396)
T ss_dssp ECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGGGCE
T ss_pred EecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCCCce
Confidence 99999999977622 289999999999999999999996 89999999999999 777889999999998
Q ss_pred ccCcccCCcccccccccccccccchh-----------------------HHHHHHHHHhCCCCCCccccCCc---cHHHH
Q 041479 672 FIPEVMSSNQCSSVGLKGTVGYATPE-----------------------YGILLLEIFTGKRPTSDMFTEGL---DLHNF 725 (771)
Q Consensus 672 ~~~~~~~~~~~~~~~~~gt~~y~aPE-----------------------~Gv~l~el~tg~~P~~~~~~~~~---~~~~~ 725 (771)
....... .....||+.|+||| +||++|||++|+.||........ .+...
T Consensus 165 ~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~ 239 (396)
T 4eut_A 165 ELEDDEQ-----FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKI 239 (396)
T ss_dssp ECCCGGG-----SSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHH
T ss_pred EccCCCc-----cccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHH
Confidence 6644321 22356999999999 59999999999999964322211 12222
Q ss_pred HHhhCCCc-----------------------hhhhcCccccccCcccChhchhhcCCHHHHHHHHHHhC
Q 041479 726 VKMALPDQ-----------------------ILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAIL 771 (771)
Q Consensus 726 ~~~~~~~~-----------------------~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~l 771 (771)
..+..+.. ....+++.+.....+||+.||++|||+.++++.++++|
T Consensus 240 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~l~~il 308 (396)
T 4eut_A 240 ITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETSDIL 308 (396)
T ss_dssp HHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHHHHH
T ss_pred hcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHHHHHHHh
Confidence 22222111 11222223334455999999999999999999998864
No 181
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=3.4e-33 Score=299.01 Aligned_cols=236 Identities=25% Similarity=0.292 Sum_probs=185.6
Q ss_pred ccccccccccccccceEEEEEecCCCeEE--EEEEeecc-chhhHHHHHHHHHHHhcc-CCCCceeEEEEeecCCCCCce
Q 041479 521 KDLLLNVSYESLVKATVYKGILDLDQTFI--AVKVLFLH-QRGALKSFMAECQALRNI-RHRNLVKIITACSTSDFQGNY 596 (771)
Q Consensus 521 ~~~~~~~~l~~~~~~~Vy~~~~~~~~~~v--AvK~~~~~-~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~ 596 (771)
.++.....+|+|.+|+||+|+++.++..+ |||.+... .....+.+.+|+++++++ +||||+++++++.+.+
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~----- 99 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG----- 99 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETT-----
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCC-----
Confidence 34555667899999999999998888755 99988643 234456899999999999 8999999999998776
Q ss_pred eEEEEEEeccCCCCCCCc-------------------ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeC
Q 041479 597 FRALVYEFMHHGSLESCP-------------------RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD 657 (771)
Q Consensus 597 ~~~lv~e~~~~g~L~~~~-------------------~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~ 657 (771)
..|+||||+++|+|.++. ..+++.++..++.|++.||+|||+. +|+||||||+||+++
T Consensus 100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~ 176 (327)
T 1fvr_A 100 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVG 176 (327)
T ss_dssp EEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC
T ss_pred ceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEc
Confidence 789999999999997651 2588999999999999999999986 999999999999999
Q ss_pred CCCceEEecccCccccCcccCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCcc
Q 041479 658 NDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLD 721 (771)
Q Consensus 658 ~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~ 721 (771)
.++.+||+|||+++...... ......+++.|+||| +||++|||++ |+.||.+... ..
T Consensus 177 ~~~~~kL~Dfg~~~~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~--~~ 249 (327)
T 1fvr_A 177 ENYVAKIADFGLSRGQEVYV-----KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC--AE 249 (327)
T ss_dssp GGGCEEECCTTCEESSCEEC-----CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCH--HH
T ss_pred CCCeEEEcccCcCccccccc-----cccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcH--HH
Confidence 99999999999997433221 112235788999999 6999999998 9999975321 12
Q ss_pred HHHHHHhhCCCchhhhcCccccccCcccChhchhhcCCHHHHHHHHHHhC
Q 041479 722 LHNFVKMALPDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAIL 771 (771)
Q Consensus 722 ~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~l 771 (771)
+.+..........+..+++.+.....+||+.||++|||+.++++.|++++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 299 (327)
T 1fvr_A 250 LYEKLPQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 299 (327)
T ss_dssp HHHHGGGTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHhhcCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 33333333333344455666667777999999999999999999998863
No 182
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=4.8e-33 Score=295.57 Aligned_cols=228 Identities=21% Similarity=0.234 Sum_probs=173.9
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRAL 600 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~l 600 (771)
+.....+|+|.+|+||+|+++. ++.||||++.... ....+.+.+|++++++++|||||++++++.+.+ ..++
T Consensus 23 y~~~~~lG~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-----~~~l 96 (311)
T 3niz_A 23 YQKLEKVGEGTYGVVYKAKDSQ-GRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSER-----CLTL 96 (311)
T ss_dssp EEEEEEEEECSSCEEEEEEETT-SCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSS-----CEEE
T ss_pred hHhhhhccCCCCeEEEEEEECC-CCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCC-----EEEE
Confidence 3445668999999999999975 5699999996543 334578899999999999999999999988766 6899
Q ss_pred EEEeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcc
Q 041479 601 VYEFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676 (771)
Q Consensus 601 v~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~ 676 (771)
||||+++ ++.+. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 97 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~ 172 (311)
T 3niz_A 97 VFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFGLARAFGIP 172 (311)
T ss_dssp EEECCSE-EHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEETTSC
T ss_pred EEcCCCC-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCcCceecCCC
Confidence 9999985 55443 34588999999999999999999986 9999999999999999999999999999865432
Q ss_pred cCCcccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhC---CCch---
Q 041479 677 MSSNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMAL---PDQI--- 734 (771)
Q Consensus 677 ~~~~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~---~~~~--- 734 (771)
.. ......||+.|+||| +||++|||++|+.||.+..... .+..+..... +...
T Consensus 173 ~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~ 247 (311)
T 3niz_A 173 VR----SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDD-QLPKIFSILGTPNPREWPQV 247 (311)
T ss_dssp CC-------CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTT-HHHHHHHHHCCCCTTTSGGG
T ss_pred cc----cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHHCCCChHHhhhh
Confidence 21 122346899999999 6999999999999997643332 2333222111 1110
Q ss_pred ----------------------hhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 735 ----------------------LQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 735 ----------------------~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
...+++.+.....+||+.||++|||+.|+++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 248 QELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp TTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred hccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 0112233334556999999999999999986
No 183
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=1.7e-33 Score=314.52 Aligned_cols=230 Identities=23% Similarity=0.245 Sum_probs=174.9
Q ss_pred cccccccccccccceEEEEEecCCCeEEEEEEeecc---chhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeE
Q 041479 522 DLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLH---QRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFR 598 (771)
Q Consensus 522 ~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 598 (771)
.+.....+|+|.+|+||+|+++.+++.||||++... .......+.+|+++++.++||||+++++++.+.+ ..
T Consensus 149 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~-----~~ 223 (446)
T 4ejn_A 149 EFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHD-----RL 223 (446)
T ss_dssp GEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETT-----EE
T ss_pred HcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCC-----EE
Confidence 344456789999999999999999999999999754 2334567889999999999999999999998876 78
Q ss_pred EEEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCc
Q 041479 599 ALVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPE 675 (771)
Q Consensus 599 ~lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~ 675 (771)
|+|||||++|+|..+ ...+++..+..++.|++.||+|||+. .+|+||||||+|||++.++.+||+|||+|+....
T Consensus 224 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~--~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~ 301 (446)
T 4ejn_A 224 CFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIK 301 (446)
T ss_dssp EEEECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHH--TCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC
T ss_pred EEEEeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhhc--CCEEECCCCHHHEEECCCCCEEEccCCCceeccC
Confidence 999999999999766 35689999999999999999999972 3899999999999999999999999999985432
Q ss_pred ccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCc
Q 041479 676 VMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDP 740 (771)
Q Consensus 676 ~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 740 (771)
.. ......+||+.|+||| +||++|||++|+.||.+... ..+.+.... .....+..+++
T Consensus 302 ~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~--~~~~~~i~~-~~~~~p~~~~~ 374 (446)
T 4ejn_A 302 DG----ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--EKLFELILM-EEIRFPRTLGP 374 (446)
T ss_dssp ---------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHH-CCCCCCTTSCH
T ss_pred CC----cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH--HHHHHHHHh-CCCCCCccCCH
Confidence 22 1223467999999999 69999999999999965321 112222211 12223445566
Q ss_pred cccccCcccChhchhhcC-----CHHHHHH
Q 041479 741 LFLVGGVQEGEETAEENI-----KKGQIRE 765 (771)
Q Consensus 741 ~~~~~~~~cl~~~p~~Rp-----t~~~vl~ 765 (771)
.+.....+||+.||++|| |+.|+++
T Consensus 375 ~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 375 EAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp HHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred HHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 666777799999999999 9999875
No 184
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=3.2e-33 Score=297.82 Aligned_cols=228 Identities=24% Similarity=0.330 Sum_probs=168.4
Q ss_pred cccccccccccceEEEEEecCCCeEEEEEEeeccc-hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEE
Q 041479 524 LLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 524 ~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
.....+|+|.+|+||+|+++.+++.||||++.... ....+.+.+|++++++++|||||++++++.+.+ ..|+||
T Consensus 8 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-----~~~lv~ 82 (317)
T 2pmi_A 8 KQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTEN-----KLTLVF 82 (317)
T ss_dssp -----------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTT-----EEEEEE
T ss_pred eEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECC-----eEEEEE
Confidence 34456899999999999999989999999997553 234578899999999999999999999988766 789999
Q ss_pred EeccCCCCCCC---------cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCcccc
Q 041479 603 EFMHHGSLESC---------PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673 (771)
Q Consensus 603 e~~~~g~L~~~---------~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~ 673 (771)
||++ |+|.++ ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 83 e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~ 158 (317)
T 2pmi_A 83 EFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAF 158 (317)
T ss_dssp ECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCSSCEET
T ss_pred EecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCccceec
Confidence 9998 577654 13588999999999999999999986 9999999999999999999999999999865
Q ss_pred CcccCCcccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhh-CC-C---
Q 041479 674 PEVMSSNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMA-LP-D--- 732 (771)
Q Consensus 674 ~~~~~~~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~-~~-~--- 732 (771)
..... ......||+.|+||| +||++|||++|+.||.+..... .+..+.... .+ .
T Consensus 159 ~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~ 233 (317)
T 2pmi_A 159 GIPVN----TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEE-QLKLIFDIMGTPNESLW 233 (317)
T ss_dssp TSCCC----CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCSCCTTTC
T ss_pred CCCcc----cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCChhHh
Confidence 43221 122346899999999 6999999999999997532211 122221110 00 0
Q ss_pred -------------------c--------hhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 733 -------------------Q--------ILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 733 -------------------~--------~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
. ....+++.+.....+||+.||++|||+.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 293 (317)
T 2pmi_A 234 PSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALH 293 (317)
T ss_dssp GGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhC
Confidence 0 01122333444556999999999999999975
No 185
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.3e-33 Score=308.24 Aligned_cols=232 Identities=21% Similarity=0.191 Sum_probs=182.8
Q ss_pred ccccccccccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCcee
Q 041479 521 KDLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYF 597 (771)
Q Consensus 521 ~~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 597 (771)
.++.....+|+|.+|+||+|+++.+++.||||++.... ....+.+.+|+.++..++|||||++++++.+.+ .
T Consensus 61 ~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~-----~ 135 (412)
T 2vd5_A 61 DDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDEN-----Y 135 (412)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSS-----E
T ss_pred hhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCC-----E
Confidence 34455567899999999999999999999999996532 233456889999999999999999999998776 7
Q ss_pred EEEEEEeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCcccc
Q 041479 598 RALVYEFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673 (771)
Q Consensus 598 ~~lv~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~ 673 (771)
.|+|||||++|+|.++ ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 136 ~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~DFGla~~~ 212 (412)
T 2vd5_A 136 LYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLADFGSCLKL 212 (412)
T ss_dssp EEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEEC
T ss_pred EEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEeechhheec
Confidence 8999999999999876 24689999999999999999999986 9999999999999999999999999999866
Q ss_pred CcccCCcccccccccccccccchh----------------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhh--
Q 041479 674 PEVMSSNQCSSVGLKGTVGYATPE----------------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMA-- 729 (771)
Q Consensus 674 ~~~~~~~~~~~~~~~gt~~y~aPE----------------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~-- 729 (771)
..... ......+||+.|+||| +||++|||++|+.||.+.... .....+....
T Consensus 213 ~~~~~---~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~-~~~~~i~~~~~~ 288 (412)
T 2vd5_A 213 RADGT---VRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTA-ETYGKIVHYKEH 288 (412)
T ss_dssp CTTSC---EECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHH-HHHHHHHTHHHH
T ss_pred cCCCc---cccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHH-HHHHHHHhcccC
Confidence 44321 1223457999999999 599999999999999653211 1122333211
Q ss_pred CC-CchhhhcCccccccCcccChhchhhc---CCHHHHHH
Q 041479 730 LP-DQILQVLDPLFLVGGVQEGEETAEEN---IKKGQIRE 765 (771)
Q Consensus 730 ~~-~~~~~~~~~~~~~~~~~cl~~~p~~R---pt~~~vl~ 765 (771)
.. +.....+++.+.....+||. +|++| |++.|+++
T Consensus 289 ~~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~ 327 (412)
T 2vd5_A 289 LSLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRT 327 (412)
T ss_dssp CCCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHT
T ss_pred cCCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhc
Confidence 22 22234556666667779998 99998 58988864
No 186
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=3.1e-33 Score=303.71 Aligned_cols=231 Identities=26% Similarity=0.247 Sum_probs=174.1
Q ss_pred ccccccccccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHH-HhccCCCCceeEEEEeecCCCCCce
Q 041479 521 KDLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQA-LRNIRHRNLVKIITACSTSDFQGNY 596 (771)
Q Consensus 521 ~~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~-l~~l~H~nIv~l~~~~~~~~~~~~~ 596 (771)
.++.....+|+|.+|+||+|+++.+++.||||++.... ....+.+.+|..+ ++.++|||||++++++.+.+
T Consensus 38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~----- 112 (373)
T 2r5t_A 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTAD----- 112 (373)
T ss_dssp GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSS-----
T ss_pred hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCC-----
Confidence 44556667899999999999999999999999997553 2344567778877 57789999999999998776
Q ss_pred eEEEEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCcccc
Q 041479 597 FRALVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673 (771)
Q Consensus 597 ~~~lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~ 673 (771)
..|+||||+++|+|.++ ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++..
T Consensus 113 ~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG~a~~~ 189 (373)
T 2r5t_A 113 KLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFGLCKEN 189 (373)
T ss_dssp EEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCBCGGG
T ss_pred EEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCcccccc
Confidence 78999999999999766 34588899999999999999999986 9999999999999999999999999999853
Q ss_pred CcccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhc
Q 041479 674 PEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVL 738 (771)
Q Consensus 674 ~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 738 (771)
.... ......+||+.|+||| +||++|||++|+.||.+.... .....+... +...+..+
T Consensus 190 ~~~~----~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~-~~~~~i~~~--~~~~~~~~ 262 (373)
T 2r5t_A 190 IEHN----STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA-EMYDNILNK--PLQLKPNI 262 (373)
T ss_dssp BCCC----CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHH-HHHHHHHHS--CCCCCSSS
T ss_pred ccCC----CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHH-HHHHHHHhc--ccCCCCCC
Confidence 3221 1233467999999999 699999999999999653211 112222222 22233445
Q ss_pred CccccccCcccChhchhhcCCHHHHHHH
Q 041479 739 DPLFLVGGVQEGEETAEENIKKGQIRES 766 (771)
Q Consensus 739 ~~~~~~~~~~cl~~~p~~Rpt~~~vl~~ 766 (771)
++.+.....+||+.||++||++.+.++.
T Consensus 263 ~~~~~~li~~lL~~dp~~R~~~~~~~~~ 290 (373)
T 2r5t_A 263 TNSARHLLEGLLQKDRTKRLGAKDDFME 290 (373)
T ss_dssp CHHHHHHHHHHTCSSGGGSTTTTTTHHH
T ss_pred CHHHHHHHHHHcccCHHhCCCCCCCHHH
Confidence 5566666779999999999998644433
No 187
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=1.9e-33 Score=314.71 Aligned_cols=184 Identities=21% Similarity=0.208 Sum_probs=149.6
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeecc--chhhHHHHHHHHHHHhccCCCCceeEEEEeecCCC-CCceeEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLH--QRGALKSFMAECQALRNIRHRNLVKIITACSTSDF-QGNYFRA 599 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~-~~~~~~~ 599 (771)
+.....+|+|.+|+||+|++..+++.||||++... .....+++.+|+.+++.++|||||++++++..... ......|
T Consensus 64 y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~ 143 (464)
T 3ttj_A 64 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVY 143 (464)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEE
T ss_pred eEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeEE
Confidence 33455689999999999999999999999999654 34456789999999999999999999999866532 1223679
Q ss_pred EEEEeccCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCC
Q 041479 600 LVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSS 679 (771)
Q Consensus 600 lv~e~~~~g~L~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 679 (771)
+|||||+++.+......+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+|+......
T Consensus 144 lv~E~~~~~l~~~~~~~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~-- 218 (464)
T 3ttj_A 144 LVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF-- 218 (464)
T ss_dssp EEEECCSEEHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCCCC-----CC--
T ss_pred EEEeCCCCCHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEEeeeecCCCc--
Confidence 9999998764444455689999999999999999999996 99999999999999999999999999998654322
Q ss_pred cccccccccccccccchh---------------HHHHHHHHHhCCCCCCc
Q 041479 680 NQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSD 714 (771)
Q Consensus 680 ~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~ 714 (771)
.....+||+.|+||| +||++|||++|+.||.+
T Consensus 219 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pF~g 265 (464)
T 3ttj_A 219 ---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPG 265 (464)
T ss_dssp ---CC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ---ccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCCCCCC
Confidence 223457999999999 69999999999999975
No 188
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=3e-33 Score=299.39 Aligned_cols=241 Identities=20% Similarity=0.242 Sum_probs=187.7
Q ss_pred ccccccccccccceEEEEEe----cCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeE
Q 041479 523 LLLNVSYESLVKATVYKGIL----DLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFR 598 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~----~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 598 (771)
+.....+|+|.+|+||+|++ ..+++.||||++........+.+.+|++++++++||||+++++++...+. ...
T Consensus 43 y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~---~~~ 119 (326)
T 2w1i_A 43 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGR---RNL 119 (326)
T ss_dssp EEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC-------CC
T ss_pred ceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCC---Cce
Confidence 34456689999999999984 55788999999977666667889999999999999999999999865432 156
Q ss_pred EEEEEeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccC
Q 041479 599 ALVYEFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIP 674 (771)
Q Consensus 599 ~lv~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~ 674 (771)
++||||+++|+|.++ ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 120 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~ 196 (326)
T 2w1i_A 120 KLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFGLTKVLP 196 (326)
T ss_dssp EEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCcchhhcc
Confidence 899999999999776 24589999999999999999999986 99999999999999999999999999998765
Q ss_pred cccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCcccc-------CC---c----cHHHH
Q 041479 675 EVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFT-------EG---L----DLHNF 725 (771)
Q Consensus 675 ~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~-------~~---~----~~~~~ 725 (771)
..... ........++..|+||| +|+++|||+||..|+..... .. . .+.+.
T Consensus 197 ~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (326)
T 2w1i_A 197 QDKEY-YKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIEL 275 (326)
T ss_dssp SSCSE-EECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHH
T ss_pred ccccc-cccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHH
Confidence 43221 11122345788899999 69999999999998753210 00 0 11222
Q ss_pred HHhhCCCchhhhcCccccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 726 VKMALPDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 726 ~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
+........+..+++.+...+.+||+.||++|||+.|+++.|+++
T Consensus 276 ~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l 320 (326)
T 2w1i_A 276 LKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQI 320 (326)
T ss_dssp HHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred hhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 222222333445556666677799999999999999999999876
No 189
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=1.2e-33 Score=302.13 Aligned_cols=224 Identities=21% Similarity=0.192 Sum_probs=165.3
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccC-CCCceeEEEEeecCCCCCceeEEEEEEec
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIR-HRNLVKIITACSTSDFQGNYFRALVYEFM 605 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~~~~~~lv~e~~ 605 (771)
..+|+|.+|+||+|+++.+++.||||++... ....+.+|+.+++.++ |||||++++++.+.. ..|+||||+
T Consensus 17 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~-----~~~lv~e~~ 88 (325)
T 3kn6_A 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQL-----HTFLVMELL 88 (325)
T ss_dssp CCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS-----EEEEEECCC
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCC-----EEEEEEEcc
Confidence 4689999999999999999999999999643 3467789999999997 999999999998776 789999999
Q ss_pred cCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCC---ceEEecccCccccCcccCC
Q 041479 606 HHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDM---TAHMGDFGLTRFIPEVMSS 679 (771)
Q Consensus 606 ~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~---~~kl~DfGla~~~~~~~~~ 679 (771)
++|+|.++ ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||+++.......
T Consensus 89 ~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~- 164 (325)
T 3kn6_A 89 NGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ- 164 (325)
T ss_dssp CSCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCTTCEECCC----
T ss_pred CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCC-
Confidence 99999776 45689999999999999999999986 999999999999997665 899999999986543221
Q ss_pred cccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccC--CccHHHH----HHhhCC--Cchhh
Q 041479 680 NQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTE--GLDLHNF----VKMALP--DQILQ 736 (771)
Q Consensus 680 ~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~--~~~~~~~----~~~~~~--~~~~~ 736 (771)
.....+||+.|+||| +||++|||++|+.||...... .....+. ..+..+ .....
T Consensus 165 ---~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 241 (325)
T 3kn6_A 165 ---PLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWK 241 (325)
T ss_dssp ----------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSHHHH
T ss_pred ---cccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCccccc
Confidence 123356899999999 699999999999999753211 1111222 222222 22334
Q ss_pred hcCccccccCcccChhchhhcCCHHHHHH
Q 041479 737 VLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 737 ~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
.+++.+.....+||+.||++|||+.|+++
T Consensus 242 ~~s~~~~~li~~~L~~dP~~Rpt~~ell~ 270 (325)
T 3kn6_A 242 NVSQEAKDLIQGLLTVDPNKRLKMSGLRY 270 (325)
T ss_dssp TSCHHHHHHHHHHHCCCTTTCCCTTTSTT
T ss_pred CCCHHHHHHHHHHCCCChhHCCCHHHHhc
Confidence 55666667777999999999999998863
No 190
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=4.7e-33 Score=297.11 Aligned_cols=228 Identities=19% Similarity=0.199 Sum_probs=183.4
Q ss_pred cccccccccccceEEEEEecCCCeEEEEEEeeccch------hhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCcee
Q 041479 524 LLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQR------GALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYF 597 (771)
Q Consensus 524 ~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~------~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 597 (771)
.....+|+|.+|+||+|+++.+++.||||++..... ...+.+.+|++++++++||||+++++++.+.+ .
T Consensus 15 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~ 89 (321)
T 2a2a_A 15 DIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRT-----D 89 (321)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS-----E
T ss_pred EEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCC-----E
Confidence 345568999999999999999899999999965432 13678999999999999999999999998776 7
Q ss_pred EEEEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCC----ceEEecccCc
Q 041479 598 RALVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDM----TAHMGDFGLT 670 (771)
Q Consensus 598 ~~lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~----~~kl~DfGla 670 (771)
.++||||+++|+|.++ ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||++
T Consensus 90 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~ 166 (321)
T 2a2a_A 90 VVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA 166 (321)
T ss_dssp EEEEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCCTTC
T ss_pred EEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEccCccc
Confidence 8999999999999776 34578999999999999999999996 999999999999999887 7999999999
Q ss_pred cccCcccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhC--CCc
Q 041479 671 RFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMAL--PDQ 733 (771)
Q Consensus 671 ~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~--~~~ 733 (771)
+....... .....||+.|+||| +||++|||++|+.||.+.... ..+..+..... +..
T Consensus 167 ~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~ 240 (321)
T 2a2a_A 167 HEIEDGVE-----FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQ-ETLANITSVSYDFDEE 240 (321)
T ss_dssp EECCTTCC-----CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHH-HHHHHHHTTCCCCCHH
T ss_pred eecCcccc-----ccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHH-HHHHHHHhcccccChh
Confidence 86554221 22346899999999 699999999999999653211 11222222222 222
Q ss_pred hhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 734 ILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 734 ~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
....+++.+.....+||+.||++|||+.|+++
T Consensus 241 ~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 241 FFSHTSELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp HHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred hhcccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 33445556666777999999999999999986
No 191
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=2.9e-33 Score=306.60 Aligned_cols=229 Identities=19% Similarity=0.241 Sum_probs=177.9
Q ss_pred cccccccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccC--CCCceeEEEEeecCCCCCceeEE
Q 041479 524 LLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIR--HRNLVKIITACSTSDFQGNYFRA 599 (771)
Q Consensus 524 ~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~--H~nIv~l~~~~~~~~~~~~~~~~ 599 (771)
.....+|+|.+|+||+|.+.. ++.||||++.... ....+.+.+|++++++++ |||||++++++...+ ..|
T Consensus 59 ~~~~~LG~G~fg~Vy~~~~~~-~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~-----~~~ 132 (390)
T 2zmd_A 59 SILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ-----YIY 132 (390)
T ss_dssp EEEEEEECCSSEEEEEEECTT-CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS-----EEE
T ss_pred EEEEEEccCCCeEEEEEEcCC-CCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCC-----EEE
Confidence 344568999999999999876 6699999996543 445678999999999996 599999999998876 789
Q ss_pred EEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcc
Q 041479 600 LVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676 (771)
Q Consensus 600 lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~ 676 (771)
+||| +.+|+|.++ ...+++.++..++.|++.||+|||+. +|+||||||+|||++ ++.+||+|||+++.....
T Consensus 133 lv~E-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~ 207 (390)
T 2zmd_A 133 MVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPD 207 (390)
T ss_dssp EEEE-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCSSSCCC---
T ss_pred EEEe-cCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecCccccccCC
Confidence 9999 567888766 34678889999999999999999986 899999999999996 588999999999876543
Q ss_pred cCCcccccccccccccccchh--------------------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhC
Q 041479 677 MSSNQCSSVGLKGTVGYATPE--------------------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMAL 730 (771)
Q Consensus 677 ~~~~~~~~~~~~gt~~y~aPE--------------------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~ 730 (771)
.. .......+||+.|+||| +||++|||++|+.||.+.......+........
T Consensus 208 ~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~ 285 (390)
T 2zmd_A 208 TT--SVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNH 285 (390)
T ss_dssp --------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCTTS
T ss_pred Cc--cccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCccc
Confidence 22 11223457999999999 599999999999999764322122333333333
Q ss_pred CCchhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 731 PDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 731 ~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
....+...+..+..+..+||+.||++|||+.|+++
T Consensus 286 ~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~ 320 (390)
T 2zmd_A 286 EIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA 320 (390)
T ss_dssp CCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cCCCCccchHHHHHHHHHHcccChhhCCCHHHHhh
Confidence 33344444555666777999999999999999985
No 192
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=3e-33 Score=298.18 Aligned_cols=240 Identities=23% Similarity=0.229 Sum_probs=187.1
Q ss_pred cccccccccccceEEEEEe----cCCCeEEEEEEeeccc-hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeE
Q 041479 524 LLNVSYESLVKATVYKGIL----DLDQTFIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFR 598 (771)
Q Consensus 524 ~~~~~l~~~~~~~Vy~~~~----~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 598 (771)
.....+|+|.+|+||++.+ ..+++.||||++.... ....+.+.+|++++++++||||+++++++.+.+.. ..
T Consensus 34 ~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~---~~ 110 (318)
T 3lxp_A 34 KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAA---SL 110 (318)
T ss_dssp EEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTT---EE
T ss_pred hhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCc---eE
Confidence 3456789999999988765 3467899999997553 34567899999999999999999999999875322 67
Q ss_pred EEEEEeccCCCCCCC--cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcc
Q 041479 599 ALVYEFMHHGSLESC--PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676 (771)
Q Consensus 599 ~lv~e~~~~g~L~~~--~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~ 676 (771)
++||||+++|+|.++ ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 111 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 187 (318)
T 3lxp_A 111 QLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG 187 (318)
T ss_dssp EEEECCCTTCBHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGGGCEECCTT
T ss_pred EEEEecccCCcHHHHHhhCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCcccccccccc
Confidence 999999999999877 33589999999999999999999996 8999999999999999999999999999876543
Q ss_pred cCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccC---------C----ccHHHHHHh
Q 041479 677 MSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTE---------G----LDLHNFVKM 728 (771)
Q Consensus 677 ~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~---------~----~~~~~~~~~ 728 (771)
... ........||+.|+||| +|+++|||++|+.||...... + ..+.+....
T Consensus 188 ~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (318)
T 3lxp_A 188 HEY-YRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLER 266 (318)
T ss_dssp CSE-EEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHT
T ss_pred ccc-cccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhc
Confidence 221 11223345888999999 699999999999998642110 0 012222233
Q ss_pred hCCCchhhhcCccccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 729 ALPDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 729 ~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
.........+++.+.....+||+.||++|||+.|+++.|+++
T Consensus 267 ~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l 308 (318)
T 3lxp_A 267 GERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTV 308 (318)
T ss_dssp TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred ccCCCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHH
Confidence 333344455566666777799999999999999999999876
No 193
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=6e-33 Score=305.10 Aligned_cols=225 Identities=16% Similarity=0.141 Sum_probs=171.2
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhc-cCCCCceeEEEEeecCCCCCceeEEEEEEec
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRN-IRHRNLVKIITACSTSDFQGNYFRALVYEFM 605 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~-l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~~ 605 (771)
..+|+|.+|+||+|+++.+++.||||++... ..+.+|++++.+ .+|||||++++++.... .+....|+|||||
T Consensus 68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~-~~~~~~~lv~E~~ 141 (400)
T 1nxk_A 68 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLY-AGRKCLLIVMECL 141 (400)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEE-TTEEEEEEEEECC
T ss_pred ceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecc-cCCcEEEEEEEeC
Confidence 3589999999999999999999999999532 456788888754 58999999999986521 1223689999999
Q ss_pred cCCCCCCCc-----ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCC---CCceEEecccCccccCccc
Q 041479 606 HHGSLESCP-----RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN---DMTAHMGDFGLTRFIPEVM 677 (771)
Q Consensus 606 ~~g~L~~~~-----~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~---~~~~kl~DfGla~~~~~~~ 677 (771)
++|+|.++. ..+++.++..++.|++.||+|||+. +|+||||||+|||++. ++.+||+|||+++......
T Consensus 142 ~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~ 218 (400)
T 1nxk_A 142 DGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN 218 (400)
T ss_dssp CSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC---
T ss_pred CCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEecccccccCCCC
Confidence 999997662 2489999999999999999999986 9999999999999997 7899999999998654322
Q ss_pred CCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCc---cHHHHHHhhCC--Cchhhh
Q 041479 678 SSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGL---DLHNFVKMALP--DQILQV 737 (771)
Q Consensus 678 ~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~---~~~~~~~~~~~--~~~~~~ 737 (771)
.....+||+.|+||| +||++|||++|+.||.+...... ....+...... ......
T Consensus 219 -----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 293 (400)
T 1nxk_A 219 -----SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE 293 (400)
T ss_dssp -------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTTTTTT
T ss_pred -----ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCCCccccc
Confidence 123457899999999 69999999999999975432221 12233333332 222344
Q ss_pred cCccccccCcccChhchhhcCCHHHHHH
Q 041479 738 LDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 738 ~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
+++.+..+..+||+.||++|||+.|+++
T Consensus 294 ~s~~~~~li~~~L~~dP~~Rpt~~eil~ 321 (400)
T 1nxk_A 294 VSEEVKMLIRNLLKTEPTQRMTITEFMN 321 (400)
T ss_dssp SCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred CCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 5666666777999999999999999986
No 194
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.6e-33 Score=300.75 Aligned_cols=220 Identities=19% Similarity=0.217 Sum_probs=179.1
Q ss_pred ccccccccccceEEEEEecCCCeEEEEEEeeccch--------hhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCce
Q 041479 525 LNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQR--------GALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNY 596 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~--------~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~ 596 (771)
....+|+|.+|+||+|+++.+++.||||++..... ...+.+.+|++++++++||||+++++++.+.+
T Consensus 28 ~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~----- 102 (335)
T 3dls_A 28 TMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQG----- 102 (335)
T ss_dssp EEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSS-----
T ss_pred EEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCC-----
Confidence 44568999999999999999999999999965421 13356788999999999999999999998776
Q ss_pred eEEEEEEeccCC-CCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccc
Q 041479 597 FRALVYEFMHHG-SLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRF 672 (771)
Q Consensus 597 ~~~lv~e~~~~g-~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~ 672 (771)
..++||||+.+| +|.++ ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 103 ~~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~ 179 (335)
T 3dls_A 103 FFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDFGSAAY 179 (335)
T ss_dssp EEEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeecccceE
Confidence 789999999777 77665 34689999999999999999999996 999999999999999999999999999986
Q ss_pred cCcccCCcccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhh
Q 041479 673 IPEVMSSNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQ 736 (771)
Q Consensus 673 ~~~~~~~~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 736 (771)
...... ....+||+.|+||| +||++|||++|+.||.+.... ... ....+.
T Consensus 180 ~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-------~~~--~~~~~~ 245 (335)
T 3dls_A 180 LERGKL-----FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET-------VEA--AIHPPY 245 (335)
T ss_dssp CCTTCC-----BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG-------TTT--CCCCSS
T ss_pred CCCCCc-----eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH-------Hhh--ccCCCc
Confidence 654321 22356999999999 699999999999999753211 011 112223
Q ss_pred hcCccccccCcccChhchhhcCCHHHHHHH
Q 041479 737 VLDPLFLVGGVQEGEETAEENIKKGQIRES 766 (771)
Q Consensus 737 ~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~ 766 (771)
.+++.+.....+||+.||++|||+.++++.
T Consensus 246 ~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 246 LVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp CCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred ccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 355566666779999999999999999863
No 195
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=6.7e-33 Score=293.35 Aligned_cols=229 Identities=18% Similarity=0.231 Sum_probs=187.1
Q ss_pred cccccccccccceEEEEEecCCCeEEEEEEeeccc-hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEE
Q 041479 524 LLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 524 ~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
.....+|+|.+|+||+|++..+++.||||++.... ....+.+.+|+.++++++||||+++++++.+.. ..++||
T Consensus 25 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~lv~ 99 (303)
T 3a7i_A 25 TKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDT-----KLWIIM 99 (303)
T ss_dssp EEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETT-----EEEEEE
T ss_pred HHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-----eEEEEE
Confidence 34456899999999999999888899999997553 345688999999999999999999999998776 789999
Q ss_pred EeccCCCCCCC--cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCc
Q 041479 603 EFMHHGSLESC--PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSN 680 (771)
Q Consensus 603 e~~~~g~L~~~--~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~ 680 (771)
||+++++|.++ ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 100 e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~-- 174 (303)
T 3a7i_A 100 EYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI-- 174 (303)
T ss_dssp ECCTTEEHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBC--
T ss_pred EeCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecccceecCcccc--
Confidence 99999999776 34688999999999999999999996 999999999999999999999999999986543321
Q ss_pred ccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCcccccc
Q 041479 681 QCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFLVG 745 (771)
Q Consensus 681 ~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 745 (771)
......||+.|+||| +|+++|||++|+.||.+... ...........+......+++.+...
T Consensus 175 --~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~l 250 (303)
T 3a7i_A 175 --KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHP--MKVLFLIPKNNPPTLEGNYSKPLKEF 250 (303)
T ss_dssp --CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH--HHHHHHHHHSCCCCCCSSCCHHHHHH
T ss_pred --ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCH--HHHHHHhhcCCCCCCccccCHHHHHH
Confidence 123356899999999 69999999999999975322 12222333333344444556666667
Q ss_pred CcccChhchhhcCCHHHHHHH
Q 041479 746 GVQEGEETAEENIKKGQIRES 766 (771)
Q Consensus 746 ~~~cl~~~p~~Rpt~~~vl~~ 766 (771)
..+||+.||++|||+.++++.
T Consensus 251 i~~~l~~dp~~Rps~~~ll~~ 271 (303)
T 3a7i_A 251 VEACLNKEPSFRPTAKELLKH 271 (303)
T ss_dssp HHHHCCSSGGGSCCHHHHTTC
T ss_pred HHHHcCCChhhCcCHHHHhhC
Confidence 779999999999999999863
No 196
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=4e-33 Score=305.83 Aligned_cols=184 Identities=25% Similarity=0.368 Sum_probs=143.6
Q ss_pred cccccccccccceEEEEEecCCCeEEEEEEeecc--chhhHHHHHHHHHHHhccC-CCCceeEEEEeecCCCCCceeEEE
Q 041479 524 LLNVSYESLVKATVYKGILDLDQTFIAVKVLFLH--QRGALKSFMAECQALRNIR-HRNLVKIITACSTSDFQGNYFRAL 600 (771)
Q Consensus 524 ~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~~~~~~l 600 (771)
.....+|+|.+|+||+|+++.+++.||||++... .....+++.+|+.+++.++ |||||++++++...+.. ..|+
T Consensus 12 ~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~---~~~l 88 (388)
T 3oz6_A 12 ELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDR---DVYL 88 (388)
T ss_dssp EEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSS---CEEE
T ss_pred EEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCC---EEEE
Confidence 3445689999999999999999999999998543 3445678899999999997 99999999998764422 5799
Q ss_pred EEEeccCCCCCCC--cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccC
Q 041479 601 VYEFMHHGSLESC--PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMS 678 (771)
Q Consensus 601 v~e~~~~g~L~~~--~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 678 (771)
|||||+ |+|.+. ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+|+.......
T Consensus 89 v~e~~~-~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 164 (388)
T 3oz6_A 89 VFDYME-TDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRR 164 (388)
T ss_dssp EEECCS-EEHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEESSSCCC
T ss_pred EecccC-cCHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCccccccccccc
Confidence 999997 577655 34688999999999999999999996 999999999999999999999999999986533110
Q ss_pred C-----------------cccccccccccccccchh----------------HHHHHHHHHhCCCCCCc
Q 041479 679 S-----------------NQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSD 714 (771)
Q Consensus 679 ~-----------------~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~ 714 (771)
. ........+||+.|+||| +||++|||++|+.||.+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~ 233 (388)
T 3oz6_A 165 VTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPG 233 (388)
T ss_dssp CCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred ccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCC
Confidence 0 011223457999999999 69999999999999965
No 197
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=6.9e-33 Score=290.27 Aligned_cols=228 Identities=20% Similarity=0.262 Sum_probs=183.0
Q ss_pred cccccccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEE
Q 041479 524 LLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALV 601 (771)
Q Consensus 524 ~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv 601 (771)
.....+|+|.+|+||+|+++.+++.||||++.... ....+.+.+|++++++++||||+++++++.+.+ ..++|
T Consensus 9 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~~v 83 (284)
T 3kk8_A 9 DVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEES-----FHYLV 83 (284)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS-----EEEEE
T ss_pred hhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCC-----EEEEE
Confidence 34556899999999999999999999999996553 344578899999999999999999999998776 67999
Q ss_pred EEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCc---eEEecccCccccCc
Q 041479 602 YEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMT---AHMGDFGLTRFIPE 675 (771)
Q Consensus 602 ~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~---~kl~DfGla~~~~~ 675 (771)
|||+++|+|.+. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||++.....
T Consensus 84 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~ 160 (284)
T 3kk8_A 84 FDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 160 (284)
T ss_dssp ECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCS
T ss_pred EecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEccc
Confidence 999999999665 44589999999999999999999996 8999999999999986655 99999999976543
Q ss_pred ccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhC--CCchhhhc
Q 041479 676 VMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMAL--PDQILQVL 738 (771)
Q Consensus 676 ~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 738 (771)
... .....||+.|+||| +|+++|||++|+.||.+.... ........... +......+
T Consensus 161 ~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 234 (284)
T 3kk8_A 161 SEA-----WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQH-RLYAQIKAGAYDYPSPEWDTV 234 (284)
T ss_dssp SCB-----CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHTCCCCCTTTTTTS
T ss_pred Ccc-----ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchh-HHHHHHHhccccCCchhhccc
Confidence 221 22356899999999 699999999999999653211 11222222222 22233455
Q ss_pred CccccccCcccChhchhhcCCHHHHHH
Q 041479 739 DPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 739 ~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
++.+.....+||+.||++|||+.|+++
T Consensus 235 ~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (284)
T 3kk8_A 235 TPEAKSLIDSMLTVNPKKRITADQALK 261 (284)
T ss_dssp CHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred CHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 666666777999999999999999985
No 198
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=3.1e-33 Score=301.38 Aligned_cols=229 Identities=20% Similarity=0.246 Sum_probs=177.4
Q ss_pred cccccccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCC--CCceeEEEEeecCCCCCceeEE
Q 041479 524 LLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRH--RNLVKIITACSTSDFQGNYFRA 599 (771)
Q Consensus 524 ~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H--~nIv~l~~~~~~~~~~~~~~~~ 599 (771)
.....+|+|.+|+||+|.+.. ++.||||++.... ....+.+.+|++++++++| |||+++++++.+.+ ..|
T Consensus 12 ~i~~~lG~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~-----~~~ 85 (343)
T 3dbq_A 12 SILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ-----YIY 85 (343)
T ss_dssp EEEEEESCCSSEEEEEEECTT-SCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS-----EEE
T ss_pred EEEEEEecCCCeEEEEEEeCC-CCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCC-----EEE
Confidence 344568999999999999865 5699999996543 3455789999999999986 99999999998776 789
Q ss_pred EEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcc
Q 041479 600 LVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676 (771)
Q Consensus 600 lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~ 676 (771)
+|||| .+|+|.++ ...+++.++..++.|++.||+|||+. +|+||||||+|||++ ++.+||+|||+++.....
T Consensus 86 lv~e~-~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~ 160 (343)
T 3dbq_A 86 MVMEC-GNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPD 160 (343)
T ss_dssp EEECC-CSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCSSSCCC---
T ss_pred EEEeC-CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeecccccccCcc
Confidence 99995 57788776 45688999999999999999999996 899999999999997 678999999999876543
Q ss_pred cCCcccccccccccccccchh--------------------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhC
Q 041479 677 MSSNQCSSVGLKGTVGYATPE--------------------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMAL 730 (771)
Q Consensus 677 ~~~~~~~~~~~~gt~~y~aPE--------------------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~ 730 (771)
.. .......+||+.|+||| +||++|||++|+.||.+.......+........
T Consensus 161 ~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~ 238 (343)
T 3dbq_A 161 TT--SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNH 238 (343)
T ss_dssp -----------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTS
T ss_pred cc--cccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhcCCc
Confidence 22 11223457999999999 599999999999999764332222333333333
Q ss_pred CCchhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 731 PDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 731 ~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
+...+...++.+.....+||+.||++|||+.|+++
T Consensus 239 ~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~ 273 (343)
T 3dbq_A 239 EIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA 273 (343)
T ss_dssp CCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHHh
Confidence 34444555556666777999999999999999985
No 199
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=8.7e-33 Score=296.84 Aligned_cols=241 Identities=23% Similarity=0.205 Sum_probs=172.8
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccC-CCCceeEEEEeecCCC---CCceeE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIR-HRNLVKIITACSTSDF---QGNYFR 598 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~---~~~~~~ 598 (771)
+.....+|+|.+|+||+|++..+++.||||++........+.+.+|+.+++++. ||||+++++++..... ......
T Consensus 30 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~ 109 (337)
T 3ll6_A 30 LRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEF 109 (337)
T ss_dssp EEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEE
T ss_pred EEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCceE
Confidence 334556899999999999999888999999997666666788999999999996 9999999999853221 233467
Q ss_pred EEEEEeccCCCCCCC------cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccc
Q 041479 599 ALVYEFMHHGSLESC------PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRF 672 (771)
Q Consensus 599 ~lv~e~~~~g~L~~~------~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~ 672 (771)
++||||+. |+|.++ ...+++.++..++.|++.||+|||+. .++|+||||||+||+++.++.+||+|||+++.
T Consensus 110 ~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~-~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~ 187 (337)
T 3ll6_A 110 LLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATT 187 (337)
T ss_dssp EEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTS-SSCCBCCCCCGGGCEECTTSCEEBCCCTTCBC
T ss_pred EEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhC-CCCEEEccCCcccEEECCCCCEEEecCcccee
Confidence 99999996 677654 23589999999999999999999986 12399999999999999999999999999987
Q ss_pred cCcccCCc--------ccccccccccccccchh------------------HHHHHHHHHhCCCCCCccccCCccHHHHH
Q 041479 673 IPEVMSSN--------QCSSVGLKGTVGYATPE------------------YGILLLEIFTGKRPTSDMFTEGLDLHNFV 726 (771)
Q Consensus 673 ~~~~~~~~--------~~~~~~~~gt~~y~aPE------------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~ 726 (771)
........ ........||+.|+||| +||++|||++|+.||.+... .+..
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~-----~~~~ 262 (337)
T 3ll6_A 188 ISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAK-----LRIV 262 (337)
T ss_dssp CSSCC-------------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC--------------
T ss_pred ccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhH-----HHhh
Confidence 65432111 01112346899999999 69999999999999965321 1223
Q ss_pred HhhCCCchhhhcCccccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 727 KMALPDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 727 ~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
.............+.+.....+||+.||++|||+.|+++.|+++
T Consensus 263 ~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~ 306 (337)
T 3ll6_A 263 NGKYSIPPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEI 306 (337)
T ss_dssp ---CCCCTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHH
T ss_pred cCcccCCcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 33333333344455565667799999999999999999999875
No 200
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.4e-34 Score=305.95 Aligned_cols=240 Identities=22% Similarity=0.237 Sum_probs=165.9
Q ss_pred ccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhc--cCCCCceeEEEEeecCCCCCceeEEEEE
Q 041479 525 LNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRN--IRHRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~--l~H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
....+|+|.+|+||+|++. ++.||||++... ....+.+|.+++.. ++||||+++++++..... .....++||
T Consensus 7 ~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~---~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~-~~~~~~lv~ 80 (303)
T 3gxj_A 7 LQESIGKGRFGEVWRGKWR--GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNG-TWTQLWLVS 80 (303)
T ss_dssp CCEEEEECSSSEEEEC-CT--TSCEEEEECC-T---THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECS-SSEEEEEEE
T ss_pred ehhhccCCCCeEEEEEEEc--CcceEEEEeccc---chhhHHHHHHHHHHHhccCcceeeeeeecccCCC-ccceeEEEE
Confidence 4456899999999999875 568999998543 34667888888888 789999999999876542 122579999
Q ss_pred EeccCCCCCCC--cccCCHHHHHHHHHHHHHHHHHHHhcC-----CCCeEecCCCCCCeeeCCCCceEEecccCccccCc
Q 041479 603 EFMHHGSLESC--PRILSFLRRLNIAIDVASALEYLHHHC-----KKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPE 675 (771)
Q Consensus 603 e~~~~g~L~~~--~~~l~~~~~~~i~~~ia~gL~~LH~~~-----~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~ 675 (771)
||+++|+|.++ ...+++.++..++.|++.||+|||... +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 81 e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~DFg~a~~~~~ 160 (303)
T 3gxj_A 81 DYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDS 160 (303)
T ss_dssp ECCTTCCHHHHHHHCCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCCCCC-CCEET
T ss_pred eccCCCCHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEeecCcceeccC
Confidence 99999999877 345788889999999999999999211 24999999999999999999999999999976544
Q ss_pred ccCCcccccccccccccccchh---------------------HHHHHHHHHhC----------CCCCCccccCCc----
Q 041479 676 VMSSNQCSSVGLKGTVGYATPE---------------------YGILLLEIFTG----------KRPTSDMFTEGL---- 720 (771)
Q Consensus 676 ~~~~~~~~~~~~~gt~~y~aPE---------------------~Gv~l~el~tg----------~~P~~~~~~~~~---- 720 (771)
.............||+.|+||| |||++|||++| +.||.+......
T Consensus 161 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~p~~~~~~~~~~~~~ 240 (303)
T 3gxj_A 161 ATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEE 240 (303)
T ss_dssp TTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-CCCCC-
T ss_pred CCcccccccCCCCcCccccCHhhhcCcccccccccCcchhHHHHHHHHHHHHhcCCCccccceeeccccccCCCCccHHH
Confidence 3322122223447999999999 59999999999 677755322211
Q ss_pred cHHHHHHhhCCCchhhh-----cCccccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 721 DLHNFVKMALPDQILQV-----LDPLFLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 721 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
..............+.. ..+.+...+.+||+.||++|||+.++++.|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~l 295 (303)
T 3gxj_A 241 MRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL 295 (303)
T ss_dssp CHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHHHHHHHHC-
T ss_pred HHHHHHHhhcCCCccccccchhhHHHHHHHHHHHhccCcccCCCHHHHHHHHHHh
Confidence 12222222222222221 112344566799999999999999999999976
No 201
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=2e-33 Score=303.16 Aligned_cols=243 Identities=18% Similarity=0.189 Sum_probs=178.9
Q ss_pred ccccccccccccceEEEEEecC---CCeEEEEEEeeccchh-----------hHHHHHHHHHHHhccCCCCceeEEEEee
Q 041479 523 LLLNVSYESLVKATVYKGILDL---DQTFIAVKVLFLHQRG-----------ALKSFMAECQALRNIRHRNLVKIITACS 588 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~---~~~~vAvK~~~~~~~~-----------~~~~~~~E~~~l~~l~H~nIv~l~~~~~ 588 (771)
+.....+|+|.+|+||+|++.. ++..||||++...... ..+.+.+|+..++.++||||+++++++.
T Consensus 39 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~~~ 118 (345)
T 2v62_A 39 WVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGL 118 (345)
T ss_dssp EEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEEEE
T ss_pred EEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecccc
Confidence 3445568999999999999986 6679999999654311 1235778999999999999999999987
Q ss_pred cCCCCCceeEEEEEEeccCCCCCCCc---ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCC--ceE
Q 041479 589 TSDFQGNYFRALVYEFMHHGSLESCP---RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDM--TAH 663 (771)
Q Consensus 589 ~~~~~~~~~~~lv~e~~~~g~L~~~~---~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~--~~k 663 (771)
+.. .+....|+||||+ +++|.++. ..+++.++..++.|++.||+|||+. +|+||||||+||+++.++ .+|
T Consensus 119 ~~~-~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~k 193 (345)
T 2v62_A 119 TEF-KGRSYRFMVMERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKNPDQVY 193 (345)
T ss_dssp EES-SSCEEEEEEEECE-EEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESSSTTSEE
T ss_pred ccc-CCCcEEEEEEecc-CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccCCCCcEE
Confidence 732 2233789999999 99997762 3689999999999999999999996 999999999999998877 999
Q ss_pred EecccCccccCcccCCc---ccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHH
Q 041479 664 MGDFGLTRFIPEVMSSN---QCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNF 725 (771)
Q Consensus 664 l~DfGla~~~~~~~~~~---~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~ 725 (771)
|+|||+++.+....... ........||+.|+||| +||++|||++|+.||.+...........
T Consensus 194 L~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~ 273 (345)
T 2v62_A 194 LADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTA 273 (345)
T ss_dssp ECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHHH
T ss_pred EEeCCCceecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHHH
Confidence 99999998765432211 11123457999999999 6999999999999996533222212211
Q ss_pred H---HhhCCCchhh-----hcCccccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 726 V---KMALPDQILQ-----VLDPLFLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 726 ~---~~~~~~~~~~-----~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
. ....+..... .+++.+.....+||+.||++|||+.++++.|+++
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~ 326 (345)
T 2v62_A 274 KTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKKILNPH 326 (345)
T ss_dssp HHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHCTT
T ss_pred HHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHHHHhcc
Confidence 1 1222222211 3444555667799999999999999999999764
No 202
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=8.1e-33 Score=295.98 Aligned_cols=230 Identities=21% Similarity=0.209 Sum_probs=172.2
Q ss_pred ccccccccccccccceEEEEEec---CCCeEEEEEEeeccc----hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCC
Q 041479 521 KDLLLNVSYESLVKATVYKGILD---LDQTFIAVKVLFLHQ----RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQ 593 (771)
Q Consensus 521 ~~~~~~~~l~~~~~~~Vy~~~~~---~~~~~vAvK~~~~~~----~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~ 593 (771)
..+.....+|+|.+|+||+|+.. .+++.||||++.... ......+.+|++++++++|||||++++++.+.+
T Consensus 17 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-- 94 (327)
T 3a62_A 17 ECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGG-- 94 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSS--
T ss_pred HHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCC--
Confidence 34455567899999999999985 567799999996542 234567889999999999999999999998776
Q ss_pred CceeEEEEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCc
Q 041479 594 GNYFRALVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLT 670 (771)
Q Consensus 594 ~~~~~~lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla 670 (771)
..|+||||+++|+|.++ ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 95 ---~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg~~ 168 (327)
T 3a62_A 95 ---KLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLC 168 (327)
T ss_dssp ---CEEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCSCC
T ss_pred ---EEEEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCCcc
Confidence 68999999999999766 34578899999999999999999996 9999999999999999999999999999
Q ss_pred cccCcccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchh
Q 041479 671 RFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQIL 735 (771)
Q Consensus 671 ~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~ 735 (771)
+....... .....+||+.|+||| +||++|||++|+.||.+.... ..+....... ...+
T Consensus 169 ~~~~~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~-~~~~~i~~~~--~~~p 241 (327)
T 3a62_A 169 KESIHDGT----VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRK-KTIDKILKCK--LNLP 241 (327)
T ss_dssp --------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHH-HHHHHHHHTC--CCCC
T ss_pred cccccCCc----cccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHH-HHHHHHHhCC--CCCC
Confidence 75432221 123457999999999 699999999999999753211 1122222222 2233
Q ss_pred hhcCccccccCcccChhchhhcC-----CHHHHHH
Q 041479 736 QVLDPLFLVGGVQEGEETAEENI-----KKGQIRE 765 (771)
Q Consensus 736 ~~~~~~~~~~~~~cl~~~p~~Rp-----t~~~vl~ 765 (771)
..+++.+.....+||+.||++|| ++.|+++
T Consensus 242 ~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 242 PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp TTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred CCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 44556666677799999999999 6777764
No 203
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=1.2e-32 Score=290.12 Aligned_cols=228 Identities=18% Similarity=0.195 Sum_probs=184.3
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRA 599 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 599 (771)
+.....+|+|.+|+||+|+++.+++.||+|++.... ....+.+.+|+.++++++||||+++++++.+.+ ..+
T Consensus 17 y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-----~~~ 91 (294)
T 2rku_A 17 YVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDND-----FVF 91 (294)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSS-----EEE
T ss_pred eEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCC-----EEE
Confidence 344556899999999999999999999999996542 345678999999999999999999999998776 789
Q ss_pred EEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcc
Q 041479 600 LVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676 (771)
Q Consensus 600 lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~ 676 (771)
+||||+++++|.++ ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 92 lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~ 168 (294)
T 2rku_A 92 VVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 168 (294)
T ss_dssp EEEECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCST
T ss_pred EEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEeccCceecccC
Confidence 99999999999776 34689999999999999999999996 9999999999999999999999999999865432
Q ss_pred cCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCcc
Q 041479 677 MSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPL 741 (771)
Q Consensus 677 ~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 741 (771)
.. ......||+.|+||| +|+++|||++|+.||.+..... ........ ....+..+++.
T Consensus 169 ~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~-~~~~~~~~--~~~~~~~~~~~ 241 (294)
T 2rku_A 169 GE----RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE-TYLRIKKN--EYSIPKHINPV 241 (294)
T ss_dssp TC----CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHHTT--CCCCCTTSCHH
T ss_pred cc----ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHhhc--cCCCccccCHH
Confidence 21 122346899999999 6999999999999997532111 11122121 12233455666
Q ss_pred ccccCcccChhchhhcCCHHHHHH
Q 041479 742 FLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 742 ~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
+.....+||+.||++|||+.|+++
T Consensus 242 ~~~li~~~l~~~p~~Rps~~~ll~ 265 (294)
T 2rku_A 242 AASLIQKMLQTDPTARPTINELLN 265 (294)
T ss_dssp HHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred HHHHHHHHcccChhhCcCHHHHhh
Confidence 666777999999999999999885
No 204
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=8.3e-33 Score=296.35 Aligned_cols=229 Identities=19% Similarity=0.178 Sum_probs=180.1
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccC-CCCceeEEEEeecCCCCCceeEEEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIR-HRNLVKIITACSTSDFQGNYFRALV 601 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~~~~~~lv 601 (771)
+.....+|+|.+|+||+|++..+++.||||++... ..+.+.+|++++++++ ||||+++++++.+... ...++|
T Consensus 38 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~---~~~~lv 111 (330)
T 3nsz_A 38 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV---KKKKIKREIKILENLRGGPNIITLADIVKDPVS---RTPALV 111 (330)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC---CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTT---CCEEEE
T ss_pred eEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc---chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCC---CceEEE
Confidence 44456789999999999999999999999999643 3467899999999997 9999999999886431 167999
Q ss_pred EEeccCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCC-ceEEecccCccccCcccCCc
Q 041479 602 YEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDM-TAHMGDFGLTRFIPEVMSSN 680 (771)
Q Consensus 602 ~e~~~~g~L~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~-~~kl~DfGla~~~~~~~~~~ 680 (771)
|||+++++|.++.+.+++.++..++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||+++.......
T Consensus 112 ~e~~~~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~-- 186 (330)
T 3nsz_A 112 FEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE-- 186 (330)
T ss_dssp EECCCCCCHHHHGGGCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCC--
T ss_pred EeccCchhHHHHHHhCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCc--
Confidence 99999999988878899999999999999999999986 899999999999999776 899999999986544322
Q ss_pred ccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHH------------hhC--
Q 041479 681 QCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVK------------MAL-- 730 (771)
Q Consensus 681 ~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~------------~~~-- 730 (771)
.....||+.|+||| +||++|||++|+.||.........+..... ...
T Consensus 187 ---~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 263 (330)
T 3nsz_A 187 ---YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIE 263 (330)
T ss_dssp ---CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCC
T ss_pred ---cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccc
Confidence 12346899999999 699999999999999542221111111111 000
Q ss_pred ---------------------CCchhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 731 ---------------------PDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 731 ---------------------~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
+......+++.+.....+||+.||++|||+.|+++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~ 319 (330)
T 3nsz_A 264 LDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAME 319 (330)
T ss_dssp CCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred cccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 01111224555555667999999999999999986
No 205
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=1.8e-32 Score=295.24 Aligned_cols=240 Identities=22% Similarity=0.260 Sum_probs=182.8
Q ss_pred ccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhc--cCCCCceeEEEEeecCCCCCceeEEEEE
Q 041479 525 LNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRN--IRHRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~--l~H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
....+|+|.+|+||+|++. ++.||||++... ..+.+.+|++++.. ++||||+++++++...+.. ....++||
T Consensus 46 ~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~-~~~~~lv~ 119 (342)
T 1b6c_B 46 LQESIGKGRFGEVWRGKWR--GEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGT-WTQLWLVS 119 (342)
T ss_dssp EEEEEEEETTEEEEEEEET--TEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSS-CCCEEEEE
T ss_pred EEeeecCCCCcEEEEEEEc--CccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCc-cceeEEEE
Confidence 3456899999999999884 679999999643 34678889999887 7899999999998765421 12579999
Q ss_pred EeccCCCCCCC--cccCCHHHHHHHHHHHHHHHHHHHhcC-----CCCeEecCCCCCCeeeCCCCceEEecccCccccCc
Q 041479 603 EFMHHGSLESC--PRILSFLRRLNIAIDVASALEYLHHHC-----KKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPE 675 (771)
Q Consensus 603 e~~~~g~L~~~--~~~l~~~~~~~i~~~ia~gL~~LH~~~-----~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~ 675 (771)
||+++|+|.++ ...+++.++..++.|++.||+|||+.. +.+|+||||||+||+++.++.+||+|||+++....
T Consensus 120 e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~ 199 (342)
T 1b6c_B 120 DYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDS 199 (342)
T ss_dssp CCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCCTTCEEEET
T ss_pred eecCCCcHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEECCCceeccc
Confidence 99999999877 346899999999999999999999310 14899999999999999999999999999986544
Q ss_pred ccCCcccccccccccccccchh---------------------HHHHHHHHHhC----------CCCCCccccCCccHHH
Q 041479 676 VMSSNQCSSVGLKGTVGYATPE---------------------YGILLLEIFTG----------KRPTSDMFTEGLDLHN 724 (771)
Q Consensus 676 ~~~~~~~~~~~~~gt~~y~aPE---------------------~Gv~l~el~tg----------~~P~~~~~~~~~~~~~ 724 (771)
.............||+.|+||| +||++|||+|| +.||.+..........
T Consensus 200 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~ 279 (342)
T 1b6c_B 200 ATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEE 279 (342)
T ss_dssp TTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHH
T ss_pred cccccccccccCCcCcccCCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCcccHHH
Confidence 3321111233457999999999 59999999999 7788765444433444
Q ss_pred HHHhh----CCCchhh-----hcCccccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 725 FVKMA----LPDQILQ-----VLDPLFLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 725 ~~~~~----~~~~~~~-----~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
+.... .+...+. .....+...+.+||+.||++|||+.+|++.|+++
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~~i~~~L~~i 334 (342)
T 1b6c_B 280 MRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALRIKKTLSQL 334 (342)
T ss_dssp HHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccChhhCCCHHHHHHHHHHH
Confidence 33322 1222221 1112344566699999999999999999999986
No 206
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=7.3e-33 Score=313.44 Aligned_cols=227 Identities=22% Similarity=0.200 Sum_probs=179.8
Q ss_pred ccccccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEE
Q 041479 525 LNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
....+|+|.+|+||+|+++.+++.||||++.... ....+.+.+|+.+++.++|||||++++++.+.. ..|+||
T Consensus 41 ~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~-----~~~lv~ 115 (494)
T 3lij_A 41 RVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKR-----NYYLVM 115 (494)
T ss_dssp EEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSS-----EEEEEE
T ss_pred EeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCC-----EEEEEE
Confidence 3456899999999999999999999999996543 334578999999999999999999999998776 789999
Q ss_pred EeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCC---CceEEecccCccccCcc
Q 041479 603 EFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDND---MTAHMGDFGLTRFIPEV 676 (771)
Q Consensus 603 e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~---~~~kl~DfGla~~~~~~ 676 (771)
|||++|+|.+. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.. +.+||+|||+++.....
T Consensus 116 e~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~ 192 (494)
T 3lij_A 116 ECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQ 192 (494)
T ss_dssp ECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTT
T ss_pred ecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCC
Confidence 99999999665 34688999999999999999999986 99999999999999764 55999999999866432
Q ss_pred cCCcccccccccccccccchh--------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCC--CchhhhcCc
Q 041479 677 MSSNQCSSVGLKGTVGYATPE--------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALP--DQILQVLDP 740 (771)
Q Consensus 677 ~~~~~~~~~~~~gt~~y~aPE--------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 740 (771)
. .....+||+.|+||| +||++|||++|+.||.+.... ..+..+.....+ ......+++
T Consensus 193 ~-----~~~~~~gt~~y~aPE~l~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s~ 266 (494)
T 3lij_A 193 K-----KMKERLGTAYYIAPEVLRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQ-EILRKVEKGKYTFDSPEWKNVSE 266 (494)
T ss_dssp B-----CBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHTCCCCCSGGGTTSCH
T ss_pred c-----cccccCCCcCeeCHHHHcccCCCchhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhCCCCCCchhcccCCH
Confidence 2 123456999999999 699999999999999764221 123333333333 233345566
Q ss_pred cccccCcccChhchhhcCCHHHHHH
Q 041479 741 LFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 741 ~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
.+.....+||+.||++|||+.++++
T Consensus 267 ~~~~li~~~L~~dp~~R~s~~e~l~ 291 (494)
T 3lij_A 267 GAKDLIKQMLQFDSQRRISAQQALE 291 (494)
T ss_dssp HHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred HHHHHHHHHCCCChhhCccHHHHhc
Confidence 6666777999999999999999984
No 207
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=1.2e-32 Score=295.78 Aligned_cols=228 Identities=18% Similarity=0.199 Sum_probs=184.8
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeecc---chhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLH---QRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRA 599 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 599 (771)
+.....+|+|.+|+||++++..+++.||+|++... .....+.+.+|+.++++++||||+++++++.+.+ ..|
T Consensus 43 y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~~ 117 (335)
T 2owb_A 43 YVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDND-----FVF 117 (335)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSS-----EEE
T ss_pred eEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCC-----eEE
Confidence 34455689999999999999999999999999654 2345678999999999999999999999998776 789
Q ss_pred EEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcc
Q 041479 600 LVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676 (771)
Q Consensus 600 lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~ 676 (771)
+||||+++++|.++ ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 118 lv~e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 194 (335)
T 2owb_A 118 VVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYD 194 (335)
T ss_dssp EEECCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECCST
T ss_pred EEEecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeeccCceecccC
Confidence 99999999999776 34689999999999999999999996 9999999999999999999999999999865432
Q ss_pred cCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCcc
Q 041479 677 MSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPL 741 (771)
Q Consensus 677 ~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 741 (771)
.. ......||+.|+||| +|+++|||++|+.||....... ....+... ....+..+++.
T Consensus 195 ~~----~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~--~~~~~~~~~~~ 267 (335)
T 2owb_A 195 GE----RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKE-TYLRIKKN--EYSIPKHINPV 267 (335)
T ss_dssp TC----CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHHHT--CCCCCTTSCHH
T ss_pred cc----cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHH-HHHHHhcC--CCCCCccCCHH
Confidence 21 122356899999999 6999999999999996532111 11122222 12233455666
Q ss_pred ccccCcccChhchhhcCCHHHHHH
Q 041479 742 FLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 742 ~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
+.....+||+.||++|||+.|+++
T Consensus 268 ~~~li~~~l~~dp~~Rps~~ell~ 291 (335)
T 2owb_A 268 AASLIQKMLQTDPTARPTINELLN 291 (335)
T ss_dssp HHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred HHHHHHHHccCChhHCcCHHHHhc
Confidence 666777999999999999999985
No 208
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=7.7e-33 Score=289.00 Aligned_cols=229 Identities=20% Similarity=0.268 Sum_probs=170.1
Q ss_pred cccccccccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeE
Q 041479 522 DLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFR 598 (771)
Q Consensus 522 ~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 598 (771)
++.....+|+|.+|+||+|++..+++.||||++.... ....+.+.+|++++++++||||+++++++.+.+ ..
T Consensus 12 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~ 86 (278)
T 3cok_A 12 DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSN-----YV 86 (278)
T ss_dssp GEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSS-----EE
T ss_pred cceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCC-----eE
Confidence 3444567899999999999998888899999996543 233578999999999999999999999998766 78
Q ss_pred EEEEEeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccC
Q 041479 599 ALVYEFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIP 674 (771)
Q Consensus 599 ~lv~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~ 674 (771)
++||||+++++|.++ ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++...
T Consensus 87 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~ 163 (278)
T 3cok_A 87 YLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLK 163 (278)
T ss_dssp EEEEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeecceeecc
Confidence 999999999999766 24689999999999999999999996 99999999999999999999999999998654
Q ss_pred cccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcC
Q 041479 675 EVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLD 739 (771)
Q Consensus 675 ~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 739 (771)
.... ......||+.|+||| +|+++|||++|+.||....... .+...... ....+..++
T Consensus 164 ~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~--~~~~~~~~~ 236 (278)
T 3cok_A 164 MPHE----KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKN-TLNKVVLA--DYEMPSFLS 236 (278)
T ss_dssp --------------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC------CCSS--CCCCCTTSC
T ss_pred CCCC----cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHH-HHHHHhhc--ccCCccccC
Confidence 3221 112346899999999 6999999999999997532211 11111111 112233445
Q ss_pred ccccccCcccChhchhhcCCHHHHHH
Q 041479 740 PLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 740 ~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
+.+.....+||+.||++|||+.++++
T Consensus 237 ~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 237 IEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp HHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred HHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 55556677999999999999999975
No 209
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=7.4e-33 Score=310.63 Aligned_cols=182 Identities=22% Similarity=0.305 Sum_probs=138.9
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeecc--chhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLH--QRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRAL 600 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~l 600 (771)
+.....+|+|.+|+||+|+++.+++.||||++... .....+++.+|++++++++|||||++++++...+.+.....|+
T Consensus 55 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~l 134 (458)
T 3rp9_A 55 YEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYV 134 (458)
T ss_dssp EEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEE
T ss_pred eEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEEE
Confidence 44456689999999999999999999999999543 3345678999999999999999999999997665444447899
Q ss_pred EEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCccc
Q 041479 601 VYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVM 677 (771)
Q Consensus 601 v~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~ 677 (771)
||||+. |+|.++ ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+|+......
T Consensus 135 v~e~~~-~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~ 210 (458)
T 3rp9_A 135 VLEIAD-SDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPE 210 (458)
T ss_dssp EECCCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCTTCBCTTSCT
T ss_pred EEeccc-cchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccccchhccCcc
Confidence 999985 677655 34589999999999999999999996 99999999999999999999999999998764321
Q ss_pred CCc-----------------------ccccccccccccccchh----------------HHHHHHHHHhC
Q 041479 678 SSN-----------------------QCSSVGLKGTVGYATPE----------------YGILLLEIFTG 708 (771)
Q Consensus 678 ~~~-----------------------~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg 708 (771)
... .....+.+||+.|+||| +||++|||++|
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 211 NGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp TCCCCCC---------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred ccccccccCccccccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 110 01234567899999999 69999999994
No 210
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=8.5e-33 Score=288.72 Aligned_cols=230 Identities=29% Similarity=0.308 Sum_probs=179.2
Q ss_pred ccccccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEE
Q 041479 521 KDLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRAL 600 (771)
Q Consensus 521 ~~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~l 600 (771)
..+.....+|+|.+|+||+|.+. ++.||||++.... ..+++.+|++++++++||||+++++++.+.+. ..++
T Consensus 21 ~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~----~~~l 92 (278)
T 1byg_A 21 KELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG----GLYI 92 (278)
T ss_dssp GGEEEEEEEEECSSCEEEEEEET--TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC------CCEE
T ss_pred hhceEEeEEecCCCceEEEEEEc--CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCC----ceEE
Confidence 34555667899999999999875 6699999996443 45789999999999999999999999765431 5699
Q ss_pred EEEeccCCCCCCCcc-----cCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCc
Q 041479 601 VYEFMHHGSLESCPR-----ILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPE 675 (771)
Q Consensus 601 v~e~~~~g~L~~~~~-----~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~ 675 (771)
||||+++|+|.++.. .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 93 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~ 169 (278)
T 1byg_A 93 VTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTKEASS 169 (278)
T ss_dssp EECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCCC------
T ss_pred EEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeeccccccccc
Confidence 999999999987722 378889999999999999999986 899999999999999999999999999975433
Q ss_pred ccCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhhhcC
Q 041479 676 VMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQVLD 739 (771)
Q Consensus 676 ~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 739 (771)
.. ....+++.|+||| +|+++|||++ |+.||..... ...........+......++
T Consensus 170 ~~-------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~ 240 (278)
T 1byg_A 170 TQ-------DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL--KDVVPRVEKGYKMDAPDGCP 240 (278)
T ss_dssp -------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCG--GGHHHHHTTTCCCCCCTTCC
T ss_pred cc-------cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHhcCCCCCCcccCC
Confidence 21 1235788999999 6999999998 9999976422 22333343333344445556
Q ss_pred ccccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 740 PLFLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 740 ~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
+.+.....+||+.||++|||+.++++.|+++
T Consensus 241 ~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i 271 (278)
T 1byg_A 241 PAVYEVMKNCWHLDAAMRPSFLQLREQLEHI 271 (278)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCChhhCCCHHHHHHHHHHH
Confidence 6666777799999999999999999999875
No 211
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=1.8e-32 Score=294.53 Aligned_cols=247 Identities=23% Similarity=0.290 Sum_probs=177.3
Q ss_pred cccccccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHH--HhccCCCCceeEEEEeecCCCCCcee
Q 041479 520 RKDLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQA--LRNIRHRNLVKIITACSTSDFQGNYF 597 (771)
Q Consensus 520 ~~~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~--l~~l~H~nIv~l~~~~~~~~~~~~~~ 597 (771)
...+.....+|+|.+|+||+|++ +++.||||++..... ..+..|.++ +..++||||+++++++......+...
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~---~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 86 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFANR---QNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRME 86 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE--TTEEEEEEEEEGGGH---HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEE
T ss_pred hHHhheeeecccCCCeEEEEEEE--CCeEEEEEEeeccch---hhHHHHHHHHHHHhccCcchhhheecccccccCCCce
Confidence 34455566789999999999977 467999999965432 344444444 55589999999998776544444557
Q ss_pred EEEEEEeccCCCCCCC--cccCCHHHHHHHHHHHHHHHHHHHhcC------CCCeEecCCCCCCeeeCCCCceEEecccC
Q 041479 598 RALVYEFMHHGSLESC--PRILSFLRRLNIAIDVASALEYLHHHC------KKPIVHCDLKPSNVLLDNDMTAHMGDFGL 669 (771)
Q Consensus 598 ~~lv~e~~~~g~L~~~--~~~l~~~~~~~i~~~ia~gL~~LH~~~------~~~ivHrdlk~~NILl~~~~~~kl~DfGl 669 (771)
.++||||+++|+|.++ ....++..+..++.|++.||+|||+.+ +++|+||||||+|||++.++.+||+|||+
T Consensus 87 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~ 166 (336)
T 3g2f_A 87 YLLVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGL 166 (336)
T ss_dssp EEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTT
T ss_pred EEEEEecCCCCcHHHHHhhcccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeeccc
Confidence 7999999999999877 345688999999999999999999852 23899999999999999999999999999
Q ss_pred ccccCcccCC----cccccccccccccccchh----------------------HHHHHHHHHhCCCCCCccccC-C---
Q 041479 670 TRFIPEVMSS----NQCSSVGLKGTVGYATPE----------------------YGILLLEIFTGKRPTSDMFTE-G--- 719 (771)
Q Consensus 670 a~~~~~~~~~----~~~~~~~~~gt~~y~aPE----------------------~Gv~l~el~tg~~P~~~~~~~-~--- 719 (771)
++........ ........+||+.|+||| +||++|||++|..|+...... .
T Consensus 167 a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~ 246 (336)
T 3g2f_A 167 SMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQM 246 (336)
T ss_dssp CEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCC
T ss_pred eeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHH
Confidence 9876533211 111223457999999999 699999999997776321110 0
Q ss_pred ---------ccHHHHHH----hhCCCchhhh------cCccccccCcccChhchhhcCCHHHHHHHHHHhC
Q 041479 720 ---------LDLHNFVK----MALPDQILQV------LDPLFLVGGVQEGEETAEENIKKGQIRESLIAIL 771 (771)
Q Consensus 720 ---------~~~~~~~~----~~~~~~~~~~------~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~l 771 (771)
.....+.. .......+.. .++.+.....+||+.||++|||+.|+++.|++++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll 317 (336)
T 3g2f_A 247 AFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELM 317 (336)
T ss_dssp TTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred hhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHH
Confidence 01111111 0111111111 1223555667999999999999999999999874
No 212
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=6.3e-33 Score=291.46 Aligned_cols=232 Identities=21% Similarity=0.181 Sum_probs=172.4
Q ss_pred ccccccccccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeE
Q 041479 521 KDLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFR 598 (771)
Q Consensus 521 ~~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 598 (771)
..+.....+|+|.+|+||+|++..+++.||||++.... ....+.+.++...++.++||||+++++++.+.+ ..
T Consensus 7 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~-----~~ 81 (290)
T 3fme_A 7 DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREG-----DV 81 (290)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSS-----SE
T ss_pred HhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccC-----CE
Confidence 34445567899999999999999999999999996542 222334455555688899999999999998766 67
Q ss_pred EEEEEeccCCCCCCC-------cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCcc
Q 041479 599 ALVYEFMHHGSLESC-------PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTR 671 (771)
Q Consensus 599 ~lv~e~~~~g~L~~~-------~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~ 671 (771)
++||||+++ +|.++ ...+++..+..++.|++.||+|||+. .+|+||||||+||+++.++.+||+|||+++
T Consensus 82 ~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~--~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~ 158 (290)
T 3fme_A 82 WICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQVKMCDFGISG 158 (290)
T ss_dssp EEEEECCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH--SCCCCCCCSGGGCEECTTCCEEBCCC----
T ss_pred EEEEehhcc-chHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEeecCCcc
Confidence 999999974 66443 34689999999999999999999984 389999999999999999999999999998
Q ss_pred ccCcccCCcccccccccccccccchh-------------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCC
Q 041479 672 FIPEVMSSNQCSSVGLKGTVGYATPE-------------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPD 732 (771)
Q Consensus 672 ~~~~~~~~~~~~~~~~~gt~~y~aPE-------------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~ 732 (771)
....... .....||+.|+||| +||++|||++|+.||.........+.+......+.
T Consensus 159 ~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~ 233 (290)
T 3fme_A 159 YLVDDVA-----KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQ 233 (290)
T ss_dssp ----------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCC
T ss_pred ccccccc-----ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCCCC
Confidence 6544321 12236899999999 59999999999999975322222333444444443
Q ss_pred chhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 733 QILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 733 ~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
.....+++.+.....+||+.||++|||+.|+++
T Consensus 234 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 234 LPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp CCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred cccccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 334455666667777999999999999999986
No 213
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=5.1e-33 Score=290.51 Aligned_cols=236 Identities=21% Similarity=0.202 Sum_probs=183.4
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRAL 600 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~l 600 (771)
+.....+|+|.+|+||+|+++.+++.||||++.... ....+.+.+|++++++++||||+++++++..... ...|+
T Consensus 8 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~---~~~~l 84 (279)
T 2w5a_A 8 YEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTN---TTLYI 84 (279)
T ss_dssp EEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGG---TEEEE
T ss_pred eeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCC---ceEEE
Confidence 444567899999999999999989999999997543 3456789999999999999999999998754321 16799
Q ss_pred EEEeccCCCCCCCc-------ccCCHHHHHHHHHHHHHHHHHHHhcC--CCCeEecCCCCCCeeeCCCCceEEecccCcc
Q 041479 601 VYEFMHHGSLESCP-------RILSFLRRLNIAIDVASALEYLHHHC--KKPIVHCDLKPSNVLLDNDMTAHMGDFGLTR 671 (771)
Q Consensus 601 v~e~~~~g~L~~~~-------~~l~~~~~~~i~~~ia~gL~~LH~~~--~~~ivHrdlk~~NILl~~~~~~kl~DfGla~ 671 (771)
||||+++|+|.++. ..+++..+..++.|++.||+|||+.. ..+|+||||||+||+++.++.+||+|||+++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~ 164 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR 164 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHH
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchhe
Confidence 99999999997762 23899999999999999999999971 0129999999999999999999999999997
Q ss_pred ccCcccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhh
Q 041479 672 FIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQ 736 (771)
Q Consensus 672 ~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 736 (771)
....... ......||+.|+||| +|+++|||++|+.||.+... ..+.+..........+.
T Consensus 165 ~~~~~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~~~i~~~~~~~~~~ 238 (279)
T 2w5a_A 165 ILNHDTS----FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQ--KELAGKIREGKFRRIPY 238 (279)
T ss_dssp HC---CH----HHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHTCCCCCCT
T ss_pred eeccccc----cccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCH--HHHHHHHhhcccccCCc
Confidence 6543221 112346899999999 69999999999999975421 12233333333333444
Q ss_pred hcCccccccCcccChhchhhcCCHHHHHHHH
Q 041479 737 VLDPLFLVGGVQEGEETAEENIKKGQIRESL 767 (771)
Q Consensus 737 ~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L 767 (771)
.+++.+.....+||+.||++|||+.|+++.+
T Consensus 239 ~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~ 269 (279)
T 2w5a_A 239 RYSDELNEIITRMLNLKDYHRPSVEEILENP 269 (279)
T ss_dssp TSCHHHHHHHHHHTCSSGGGSCCHHHHHTST
T ss_pred ccCHHHHHHHHHHcCCCcccCCCHHHHHhCh
Confidence 5566666677799999999999999998754
No 214
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=3.7e-33 Score=293.08 Aligned_cols=226 Identities=21% Similarity=0.270 Sum_probs=170.6
Q ss_pred ccccccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEE
Q 041479 525 LNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
....+|+|.+|+||+|++. +++.||||++.... ....+.+.+|++++++++||||+++++++.+.+ ..++||
T Consensus 6 ~~~~lg~G~~g~V~~~~~~-~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~~lv~ 79 (288)
T 1ob3_A 6 GLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKK-----RLVLVF 79 (288)
T ss_dssp EEEEEEEETTEEEEEEEET-TSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSS-----CEEEEE
T ss_pred hhhhcccCCCEEEEEEEcC-CCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCC-----eEEEEE
Confidence 3456899999999999984 55699999996543 233478899999999999999999999998766 689999
Q ss_pred EeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccC
Q 041479 603 EFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMS 678 (771)
Q Consensus 603 e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 678 (771)
||+++ +|.++ ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 80 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 155 (288)
T 1ob3_A 80 EHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVR 155 (288)
T ss_dssp ECCSE-EHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC---
T ss_pred EecCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECccccccCcccc
Confidence 99975 76544 35688999999999999999999996 999999999999999999999999999976543211
Q ss_pred Ccccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhh-CC--C-------
Q 041479 679 SNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMA-LP--D------- 732 (771)
Q Consensus 679 ~~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~-~~--~------- 732 (771)
......||+.|+||| +||++|||++|+.||.+..... .+....... .+ .
T Consensus 156 ----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 230 (288)
T 1ob3_A 156 ----KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEAD-QLMRIFRILGTPNSKNWPNVTE 230 (288)
T ss_dssp ----------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCTTTSTTGGG
T ss_pred ----ccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHHCCCChhhchhhhc
Confidence 122346899999999 6999999999999997532211 122222111 00 0
Q ss_pred -----------------chhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 733 -----------------QILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 733 -----------------~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
.....+++.+.....+||+.||++|||+.|+++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 280 (288)
T 1ob3_A 231 LPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALE 280 (288)
T ss_dssp STTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 001122333334556999999999999999985
No 215
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=1e-32 Score=311.74 Aligned_cols=228 Identities=23% Similarity=0.197 Sum_probs=184.2
Q ss_pred cccccccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEE
Q 041479 524 LLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALV 601 (771)
Q Consensus 524 ~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv 601 (771)
.....+|+|.+|+||+|+++.+++.||||++.... ....+.+.+|++++++++|||||++++++.+.. ..|+|
T Consensus 25 ~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~-----~~~lv 99 (486)
T 3mwu_A 25 NIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSS-----SFYIV 99 (486)
T ss_dssp EEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS-----EEEEE
T ss_pred EEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCC-----EEEEE
Confidence 34556899999999999999889999999996542 334678999999999999999999999998776 78999
Q ss_pred EEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeC---CCCceEEecccCccccCc
Q 041479 602 YEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD---NDMTAHMGDFGLTRFIPE 675 (771)
Q Consensus 602 ~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~---~~~~~kl~DfGla~~~~~ 675 (771)
||||++|+|.+. ...+++..+..++.|++.||+|||+. +|+||||||+||+++ .++.+||+|||+++....
T Consensus 100 ~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 176 (486)
T 3mwu_A 100 GELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176 (486)
T ss_dssp ECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCC
T ss_pred EEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECCcCeECCC
Confidence 999999999665 45689999999999999999999996 999999999999995 456799999999986544
Q ss_pred ccCCcccccccccccccccchh--------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCC--CchhhhcC
Q 041479 676 VMSSNQCSSVGLKGTVGYATPE--------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALP--DQILQVLD 739 (771)
Q Consensus 676 ~~~~~~~~~~~~~gt~~y~aPE--------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 739 (771)
.. .....+||+.|+||| +||++|||++|+.||.+.... ..+..+.....+ ......++
T Consensus 177 ~~-----~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~s 250 (486)
T 3mwu_A 177 NT-----KMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEY-DILKRVETGKYAFDLPQWRTIS 250 (486)
T ss_dssp C---------CCTTGGGGCCGGGGGSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHTCCCSCSGGGGGSC
T ss_pred CC-----ccCCCcCCCCCCCHHHhCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHhCCCCCCCcccCCCC
Confidence 22 122356999999999 699999999999999653221 123333333333 23334566
Q ss_pred ccccccCcccChhchhhcCCHHHHHH
Q 041479 740 PLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 740 ~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
+.+.....+||+.||++|||+.++++
T Consensus 251 ~~~~~li~~~L~~dp~~R~t~~~~l~ 276 (486)
T 3mwu_A 251 DDAKDLIRKMLTFHPSLRITATQCLE 276 (486)
T ss_dssp HHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred HHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 66767777999999999999999986
No 216
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=5.8e-33 Score=298.52 Aligned_cols=227 Identities=18% Similarity=0.223 Sum_probs=178.0
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhcc-CCCCceeEEEEeecCCCCCceeEEEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNI-RHRNLVKIITACSTSDFQGNYFRALV 601 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~~~~lv 601 (771)
+.....+|+|.+|+||+|+++.+++.||||++..... .+.+|++++.++ +|||||++++++.+.+ ..|+|
T Consensus 24 y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~-----~~~lv 94 (342)
T 2qr7_A 24 YEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGK-----YVYVV 94 (342)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSS-----EEEEE
T ss_pred EEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCC-----EEEEE
Confidence 4445578999999999999999999999999965432 345688888888 7999999999998776 78999
Q ss_pred EEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCC----CceEEecccCccccC
Q 041479 602 YEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDND----MTAHMGDFGLTRFIP 674 (771)
Q Consensus 602 ~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~----~~~kl~DfGla~~~~ 674 (771)
||||++|+|.+. ...+++.++..++.|++.||+|||+. +|+||||||+||++.+. +.+||+|||+++...
T Consensus 95 ~E~~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~ 171 (342)
T 2qr7_A 95 TELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLR 171 (342)
T ss_dssp ECCCCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECB
T ss_pred EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCc
Confidence 999999999765 34689999999999999999999996 99999999999998533 359999999998654
Q ss_pred cccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCC-cc-HHHHHHhhCC--Cchh
Q 041479 675 EVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEG-LD-LHNFVKMALP--DQIL 735 (771)
Q Consensus 675 ~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~-~~-~~~~~~~~~~--~~~~ 735 (771)
.... .....+||+.|+||| +||++|||++|+.||.+..... .. +..+.....+ ....
T Consensus 172 ~~~~----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~ 247 (342)
T 2qr7_A 172 AENG----LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYW 247 (342)
T ss_dssp CTTC----CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCCCSTTT
T ss_pred CCCC----ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcccCcccc
Confidence 3221 123457899999999 6999999999999997532111 11 2222222222 2233
Q ss_pred hhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 736 QVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 736 ~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
..+++.+.....+||..||++|||+.++++
T Consensus 248 ~~~s~~~~~li~~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 248 NSVSDTAKDLVSKMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp TTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred ccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 455666666777999999999999999875
No 217
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=7e-33 Score=296.62 Aligned_cols=237 Identities=25% Similarity=0.273 Sum_probs=181.5
Q ss_pred cccccccccccccceEEEEEe-----cCCCeEEEEEEeecc-chhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCc
Q 041479 522 DLLLNVSYESLVKATVYKGIL-----DLDQTFIAVKVLFLH-QRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGN 595 (771)
Q Consensus 522 ~~~~~~~l~~~~~~~Vy~~~~-----~~~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~ 595 (771)
.+.....+|+|.+|+||+|++ ..+++.||||++... ......++.+|+.++++++||||+++++++.+.+
T Consensus 31 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~---- 106 (327)
T 2yfx_A 31 NITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSL---- 106 (327)
T ss_dssp GCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS----
T ss_pred heEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCC----
Confidence 344456689999999999994 456679999999643 3445678999999999999999999999988766
Q ss_pred eeEEEEEEeccCCCCCCCc----------ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCC---CCce
Q 041479 596 YFRALVYEFMHHGSLESCP----------RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN---DMTA 662 (771)
Q Consensus 596 ~~~~lv~e~~~~g~L~~~~----------~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~---~~~~ 662 (771)
..|+||||+++|+|.++. ..+++.++..++.|++.||+|||+. +|+||||||+||+++. +..+
T Consensus 107 -~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~ 182 (327)
T 2yfx_A 107 -PRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVA 182 (327)
T ss_dssp -SCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCE
T ss_pred -CcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceE
Confidence 569999999999997661 3488899999999999999999986 9999999999999984 4469
Q ss_pred EEecccCccccCcccCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHH
Q 041479 663 HMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFV 726 (771)
Q Consensus 663 kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~ 726 (771)
||+|||+++....... ........||+.|+||| +|+++|||+| |+.||.+.. .....+..
T Consensus 183 kl~Dfg~~~~~~~~~~--~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~--~~~~~~~~ 258 (327)
T 2yfx_A 183 KIGDFGMARDIYRASY--YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKS--NQEVLEFV 258 (327)
T ss_dssp EECCCHHHHHHHC--------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC--HHHHHHHH
T ss_pred EECccccccccccccc--cccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcC--HHHHHHHH
Confidence 9999999975433221 11122345799999999 6999999998 999997532 12233444
Q ss_pred HhhCCCchhhhcCccccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 727 KMALPDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 727 ~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
...........+++.+.....+||+.||++|||+.++++.|+.+
T Consensus 259 ~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~ 302 (327)
T 2yfx_A 259 TSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC 302 (327)
T ss_dssp HTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred hcCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence 43333334445566666677799999999999999999999865
No 218
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=7.7e-33 Score=299.37 Aligned_cols=239 Identities=20% Similarity=0.224 Sum_probs=179.5
Q ss_pred cccccccccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCC---Cce
Q 041479 522 DLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQ---GNY 596 (771)
Q Consensus 522 ~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~---~~~ 596 (771)
.+.....+|+|.+|+||+|+++.+++.||||++.... ......+.+|++++++++||||+++++++.+.... ...
T Consensus 18 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 97 (351)
T 3mi9_A 18 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKG 97 (351)
T ss_dssp GEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------C
T ss_pred ceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCCc
Confidence 3445567899999999999999889999999985543 23356788999999999999999999998764310 012
Q ss_pred eEEEEEEeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccc
Q 041479 597 FRALVYEFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRF 672 (771)
Q Consensus 597 ~~~lv~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~ 672 (771)
..|+||||+++ ++.+. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 98 ~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~ 173 (351)
T 3mi9_A 98 SIYLVFDFCEH-DLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARA 173 (351)
T ss_dssp EEEEEEECCSE-EHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred eEEEEEeccCC-CHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccchhccc
Confidence 57999999985 44332 35689999999999999999999996 999999999999999999999999999987
Q ss_pred cCcccCCcccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHH--hhCCCch
Q 041479 673 IPEVMSSNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVK--MALPDQI 734 (771)
Q Consensus 673 ~~~~~~~~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~--~~~~~~~ 734 (771)
................||+.|+||| +||++|||++|+.||.+..... .+..+.. +..+...
T Consensus 174 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~ 252 (351)
T 3mi9_A 174 FSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQH-QLALISQLCGSITPEV 252 (351)
T ss_dssp CCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCTTT
T ss_pred ccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCChhh
Confidence 6543332233334567899999999 6999999999999997532211 1111111 1111111
Q ss_pred hhh----------------------------cCccccccCcccChhchhhcCCHHHHHH
Q 041479 735 LQV----------------------------LDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 735 ~~~----------------------------~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
... .++.+.....+||+.||++|||+.|+++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 311 (351)
T 3mi9_A 253 WPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALN 311 (351)
T ss_dssp STTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhhCCCHHHHhC
Confidence 111 1333445566999999999999999985
No 219
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=8.5e-33 Score=293.31 Aligned_cols=233 Identities=24% Similarity=0.299 Sum_probs=176.2
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccc-----hhhHHHHHHHHHHHhccC---CCCceeEEEEeecCCCCC
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ-----RGALKSFMAECQALRNIR---HRNLVKIITACSTSDFQG 594 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~-----~~~~~~~~~E~~~l~~l~---H~nIv~l~~~~~~~~~~~ 594 (771)
+.....+|+|.+|+||+|++..+++.||||++.... ......+.+|++++++++ ||||+++++++.......
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~~ 90 (308)
T 3g33_A 11 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDR 90 (308)
T ss_dssp CEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSSS
T ss_pred eEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCCC
Confidence 334556899999999999999999999999996442 122356777887777764 999999999998766444
Q ss_pred ceeEEEEEEeccCCCCCCC-----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccC
Q 041479 595 NYFRALVYEFMHHGSLESC-----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGL 669 (771)
Q Consensus 595 ~~~~~lv~e~~~~g~L~~~-----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl 669 (771)
....++||||+. |+|.++ ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+
T Consensus 91 ~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~ 166 (308)
T 3g33_A 91 EIKVTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVKLADFGL 166 (308)
T ss_dssp EEEEEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCEEECSCSC
T ss_pred ceeEEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEEeeCcc
Confidence 456799999997 588665 22389999999999999999999996 899999999999999999999999999
Q ss_pred ccccCcccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhh-CC--
Q 041479 670 TRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMA-LP-- 731 (771)
Q Consensus 670 a~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~-~~-- 731 (771)
++....... ....+||+.|+||| +||++|||++|+.||.+..... .+..+.... .+
T Consensus 167 a~~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~~~~~~ 240 (308)
T 3g33_A 167 ARIYSYQMA-----LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD-QLGKIFDLIGLPPE 240 (308)
T ss_dssp TTTSTTCCC-----SGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHH-HHHHHHHHHCCCCT
T ss_pred ccccCCCcc-----cCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCh
Confidence 986543221 23457899999999 6999999999999996532211 122222211 11
Q ss_pred Cc----------------------hhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 732 DQ----------------------ILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 732 ~~----------------------~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
.. ....+++.+.....+||+.||++|||+.|+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 296 (308)
T 3g33_A 241 DDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQ 296 (308)
T ss_dssp TTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhc
Confidence 00 01112333334556999999999999999985
No 220
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=1.8e-32 Score=287.02 Aligned_cols=227 Identities=20% Similarity=0.199 Sum_probs=179.6
Q ss_pred ccccccccccceEEEEEecCCCeEEEEEEeeccch------hhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeE
Q 041479 525 LNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQR------GALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFR 598 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~------~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 598 (771)
....+|+|.+|+||+|+++.+++.||||++..... ...+.+.+|++++++++||||+++++++.+.+ ..
T Consensus 9 ~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-----~~ 83 (283)
T 3bhy_A 9 MGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKT-----DV 83 (283)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS-----EE
T ss_pred hHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCC-----eE
Confidence 34568999999999999998888999999965421 23678999999999999999999999998766 78
Q ss_pred EEEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCC----ceEEecccCcc
Q 041479 599 ALVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDM----TAHMGDFGLTR 671 (771)
Q Consensus 599 ~lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~----~~kl~DfGla~ 671 (771)
++||||+++++|.++ ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++ .+||+|||+++
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~ 160 (283)
T 3bhy_A 84 VLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAH 160 (283)
T ss_dssp EEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred EEEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEecccce
Confidence 999999999999876 34689999999999999999999986 999999999999998877 89999999998
Q ss_pred ccCcccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhC--CCch
Q 041479 672 FIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMAL--PDQI 734 (771)
Q Consensus 672 ~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~--~~~~ 734 (771)
....... .....||+.|+||| +|+++|||++|+.||.+.... ..+..+..... +...
T Consensus 161 ~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~ 234 (283)
T 3bhy_A 161 KIEAGNE-----FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQ-ETLTNISAVNYDFDEEY 234 (283)
T ss_dssp ECC-------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHH-HHHHHHHTTCCCCCHHH
T ss_pred eccCCCc-----ccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchH-HHHHHhHhcccCCcchh
Confidence 6543221 12346899999999 699999999999999753211 11222222222 1223
Q ss_pred hhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 735 LQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 735 ~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
...+++.+.....+||+.||++|||+.++++
T Consensus 235 ~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 265 (283)
T 3bhy_A 235 FSNTSELAKDFIRRLLVKDPKRRMTIAQSLE 265 (283)
T ss_dssp HTTCCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred cccCCHHHHHHHHHHccCCHhHCcCHHHHHh
Confidence 3444555666677999999999999999986
No 221
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=9.2e-33 Score=293.41 Aligned_cols=228 Identities=19% Similarity=0.185 Sum_probs=173.1
Q ss_pred ccccccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEE
Q 041479 525 LNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
....+|+|.+|+||+|++..+++.||||++.... ....+.+.+|++++++++||||+++++++.+.+ ..++||
T Consensus 7 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-----~~~lv~ 81 (311)
T 4agu_A 7 KIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKR-----RLHLVF 81 (311)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT-----EEEEEE
T ss_pred EeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCC-----eEEEEE
Confidence 3456899999999999999988999999985443 334577899999999999999999999998776 789999
Q ss_pred EeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCC
Q 041479 603 EFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSS 679 (771)
Q Consensus 603 e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 679 (771)
||+++++|..+ ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 82 e~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 157 (311)
T 4agu_A 82 EYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSD- 157 (311)
T ss_dssp ECCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred EeCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCccc-
Confidence 99999988665 45689999999999999999999986 999999999999999999999999999986543221
Q ss_pred cccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHh--hCCCc--------
Q 041479 680 NQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKM--ALPDQ-------- 733 (771)
Q Consensus 680 ~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~--~~~~~-------- 733 (771)
......||+.|+||| +|+++|||++|+.||.+...... ....... ...+.
T Consensus 158 ---~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 233 (311)
T 4agu_A 158 ---YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQ-LYLIRKTLGDLIPRHQQVFSTN 233 (311)
T ss_dssp -----------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHH-HHHHHHHHCSCCHHHHHHHHTC
T ss_pred ---ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHHhcccccccccccccc
Confidence 122346899999999 69999999999999965322111 1111110 00000
Q ss_pred -------------------hhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 734 -------------------ILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 734 -------------------~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
....+++.+.....+||+.||++|||+.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 284 (311)
T 4agu_A 234 QYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284 (311)
T ss_dssp GGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHT
T ss_pred cccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 00122333344566999999999999999985
No 222
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=1.8e-32 Score=309.86 Aligned_cols=227 Identities=22% Similarity=0.229 Sum_probs=181.3
Q ss_pred ccccccccccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCcee
Q 041479 521 KDLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYF 597 (771)
Q Consensus 521 ~~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 597 (771)
..+.....+|+|.+|+||+|+++.+++.||||++.... ....+.+.+|++++++++|||||++++++.+.+ .
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~-----~ 259 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKT-----D 259 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSS-----E
T ss_pred hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCC-----E
Confidence 34445566899999999999999989999999996543 234578999999999999999999999988776 7
Q ss_pred EEEEEEeccCCCCCCC-------cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCc
Q 041479 598 RALVYEFMHHGSLESC-------PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLT 670 (771)
Q Consensus 598 ~~lv~e~~~~g~L~~~-------~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla 670 (771)
.|+||||+++|+|.++ ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||++
T Consensus 260 l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFGla 336 (543)
T 3c4z_A 260 LCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLA 336 (543)
T ss_dssp EEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCTTC
T ss_pred EEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeeccee
Confidence 8999999999999654 23588999999999999999999996 9999999999999999999999999999
Q ss_pred cccCcccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHh--hCCCc
Q 041479 671 RFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKM--ALPDQ 733 (771)
Q Consensus 671 ~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~--~~~~~ 733 (771)
+....... .....+||+.|+||| +||++|||++|+.||.+.... ....++... ..+..
T Consensus 337 ~~~~~~~~----~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~-~~~~~~~~~i~~~~~~ 411 (543)
T 3c4z_A 337 VELKAGQT----KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEK-VENKELKQRVLEQAVT 411 (543)
T ss_dssp EECCTTCC----CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCC-CCHHHHHHHHHHCCCC
T ss_pred eeccCCCc----ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccc-hhHHHHHHHHhhcccC
Confidence 86544321 123357999999999 699999999999999753211 112222211 11223
Q ss_pred hhhhcCccccccCcccChhchhhcCCH
Q 041479 734 ILQVLDPLFLVGGVQEGEETAEENIKK 760 (771)
Q Consensus 734 ~~~~~~~~~~~~~~~cl~~~p~~Rpt~ 760 (771)
.+..+++.+.....+||+.||++||++
T Consensus 412 ~p~~~s~~~~~li~~lL~~dP~~R~~~ 438 (543)
T 3c4z_A 412 YPDKFSPASKDFCEALLQKDPEKRLGF 438 (543)
T ss_dssp CCTTSCHHHHHHHHHHSCSSGGGSCCC
T ss_pred CCcccCHHHHHHHHHhccCCHhHCCCC
Confidence 344556666667779999999999975
No 223
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=1.4e-32 Score=294.17 Aligned_cols=225 Identities=19% Similarity=0.198 Sum_probs=178.7
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccC-CCCceeEEEEeecCCCCCceeEEEEEE
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIR-HRNLVKIITACSTSDFQGNYFRALVYE 603 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~~~~~~lv~e 603 (771)
..+|+|.+|+||+|+++.+++.||||++.... ......+.+|+.++++++ ||||+++++++.+.+ ..++|||
T Consensus 35 ~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~-----~~~lv~e 109 (327)
T 3lm5_A 35 KELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTS-----EIILILE 109 (327)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS-----EEEEEEE
T ss_pred ceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCC-----eEEEEEE
Confidence 46899999999999999999999999997543 234678999999999995 699999999998776 7899999
Q ss_pred eccCCCCCCC-----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCC---CCceEEecccCccccCc
Q 041479 604 FMHHGSLESC-----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN---DMTAHMGDFGLTRFIPE 675 (771)
Q Consensus 604 ~~~~g~L~~~-----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~---~~~~kl~DfGla~~~~~ 675 (771)
|+++|+|.++ ...+++.++..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||+++....
T Consensus 110 ~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~ 186 (327)
T 3lm5_A 110 YAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGH 186 (327)
T ss_dssp CCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC--
T ss_pred ecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCcEEEeeCccccccCC
Confidence 9999999776 25689999999999999999999986 9999999999999987 78999999999986643
Q ss_pred ccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhh--CCCchhhhc
Q 041479 676 VMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMA--LPDQILQVL 738 (771)
Q Consensus 676 ~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 738 (771)
... .....||+.|+||| +||++|||++|+.||....... ......... .+......+
T Consensus 187 ~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~ 260 (327)
T 3lm5_A 187 ACE-----LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQE-TYLNISQVNVDYSEETFSSV 260 (327)
T ss_dssp ------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHTCCCCCTTTTTTS
T ss_pred ccc-----cccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchH-HHHHHHhcccccCchhhccc
Confidence 221 22356999999999 6999999999999996532211 122222222 223333445
Q ss_pred CccccccCcccChhchhhcCCHHHHHH
Q 041479 739 DPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 739 ~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
++.+.....+||+.||++|||+.++++
T Consensus 261 ~~~~~~li~~~L~~dP~~Rpt~~~ll~ 287 (327)
T 3lm5_A 261 SQLATDFIQSLLVKNPEKRPTAEICLS 287 (327)
T ss_dssp CHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred CHHHHHHHHHHcCCChhhCcCHHHHhC
Confidence 566666777999999999999999975
No 224
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=2.6e-32 Score=286.01 Aligned_cols=228 Identities=21% Similarity=0.263 Sum_probs=183.6
Q ss_pred ccccccccccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCcee
Q 041479 521 KDLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYF 597 (771)
Q Consensus 521 ~~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 597 (771)
.++.....+|+|.+|+||+|++..+++.||||++.... ....+.+.+|++++++++||||+++++++.+.+ .
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~ 88 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRK-----R 88 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS-----E
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCC-----E
Confidence 34555667899999999999999999999999996542 233578999999999999999999999998766 7
Q ss_pred EEEEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccC
Q 041479 598 RALVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIP 674 (771)
Q Consensus 598 ~~lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~ 674 (771)
.++||||+++|+|.++ ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++....
T Consensus 89 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~ 165 (284)
T 2vgo_A 89 IYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAP 165 (284)
T ss_dssp EEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCTTCEECS
T ss_pred EEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEecccccccCc
Confidence 8999999999999766 34588999999999999999999985 99999999999999999999999999987544
Q ss_pred cccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcC
Q 041479 675 EVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLD 739 (771)
Q Consensus 675 ~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 739 (771)
... .....||+.|+||| +|+++||+++|+.||....... ........ ....+..++
T Consensus 166 ~~~------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~--~~~~~~~~~ 236 (284)
T 2vgo_A 166 SLR------RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTE-THRRIVNV--DLKFPPFLS 236 (284)
T ss_dssp SSC------BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHH-HHHHHHTT--CCCCCTTSC
T ss_pred ccc------cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhH-HHHHHhcc--ccCCCCcCC
Confidence 321 12346899999999 6999999999999996532111 11112211 122334455
Q ss_pred ccccccCcccChhchhhcCCHHHHHH
Q 041479 740 PLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 740 ~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
..+.....+|++.||++|||+.++++
T Consensus 237 ~~~~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 237 DGSKDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp HHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence 56666677999999999999999985
No 225
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=8.8e-33 Score=289.33 Aligned_cols=228 Identities=21% Similarity=0.251 Sum_probs=181.5
Q ss_pred cccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCC-----------
Q 041479 524 LLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF----------- 592 (771)
Q Consensus 524 ~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~----------- 592 (771)
.....+|+|.+|+||+|++..+++.||||++.... +.+.+|++++++++||||+++++++....+
T Consensus 14 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~ 89 (284)
T 2a19_B 14 KEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSR 89 (284)
T ss_dssp EEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---------C
T ss_pred ceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccccccc
Confidence 34456899999999999999888899999996543 356789999999999999999998854211
Q ss_pred CCceeEEEEEEeccCCCCCCC-----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecc
Q 041479 593 QGNYFRALVYEFMHHGSLESC-----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDF 667 (771)
Q Consensus 593 ~~~~~~~lv~e~~~~g~L~~~-----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~Df 667 (771)
......++||||+++|+|.++ ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 90 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Df 166 (284)
T 2a19_B 90 SKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTKQVKIGDF 166 (284)
T ss_dssp CEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCC
T ss_pred cCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcCCCCEEECcc
Confidence 112357999999999999876 24688999999999999999999986 9999999999999999999999999
Q ss_pred cCccccCcccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCC
Q 041479 668 GLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPD 732 (771)
Q Consensus 668 Gla~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~ 732 (771)
|+++....... .....||+.|+||| +|+++|||++|..|+.+.. ........ .
T Consensus 167 g~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~---~~~~~~~~----~ 234 (284)
T 2a19_B 167 GLVTSLKNDGK-----RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFETS---KFFTDLRD----G 234 (284)
T ss_dssp TTCEESSCCSC-----CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHHH---HHHHHHHT----T
T ss_pred hhheecccccc-----ccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhHH---HHHHHhhc----c
Confidence 99986654321 22346899999999 6999999999998874321 11111111 2
Q ss_pred chhhhcCccccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 733 QILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 733 ~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
.....+++.+.....+||+.||++|||+.|+++.|+.+
T Consensus 235 ~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~ 272 (284)
T 2a19_B 235 IISDIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVW 272 (284)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred cccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHH
Confidence 23344555566667799999999999999999999865
No 226
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=6.4e-33 Score=313.39 Aligned_cols=228 Identities=22% Similarity=0.193 Sum_probs=185.5
Q ss_pred cccccccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEE
Q 041479 524 LLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRAL 600 (771)
Q Consensus 524 ~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~l 600 (771)
.....+|+|.+|+||+|+++.+++.||||++.... ....+.+.+|++++++++|||||++++++.+.+ ..|+
T Consensus 29 ~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~-----~~~l 103 (484)
T 3nyv_A 29 KGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKG-----YFYL 103 (484)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSS-----EEEE
T ss_pred EEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCC-----EEEE
Confidence 34456899999999999999999999999996542 345678999999999999999999999998776 7899
Q ss_pred EEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeee---CCCCceEEecccCccccC
Q 041479 601 VYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLL---DNDMTAHMGDFGLTRFIP 674 (771)
Q Consensus 601 v~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl---~~~~~~kl~DfGla~~~~ 674 (771)
||||+.+|+|.+. ...+++..+..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++...
T Consensus 104 v~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~ 180 (484)
T 3nyv_A 104 VGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE 180 (484)
T ss_dssp EECCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBC
T ss_pred EEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcc
Confidence 9999999999665 45689999999999999999999996 89999999999999 467899999999998654
Q ss_pred cccCCcccccccccccccccchh--------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCC--Cchhhhc
Q 041479 675 EVMSSNQCSSVGLKGTVGYATPE--------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALP--DQILQVL 738 (771)
Q Consensus 675 ~~~~~~~~~~~~~~gt~~y~aPE--------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 738 (771)
.... ....+||+.|+||| +||++|||++|+.||.+.... ..+..+.....+ ......+
T Consensus 181 ~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~ 254 (484)
T 3nyv_A 181 ASKK-----MKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEY-DILKKVEKGKYTFELPQWKKV 254 (484)
T ss_dssp CCCS-----HHHHTTGGGTCCHHHHHTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHCCCCCCSGGGGGS
T ss_pred cccc-----cccCCCCccccCceeecCCCCCcceeHHHHHHHHHHHHCCCCCCCCCHH-HHHHHHHcCCCCCCCcccccC
Confidence 4321 22346999999999 699999999999999753221 123333333333 2333456
Q ss_pred CccccccCcccChhchhhcCCHHHHHH
Q 041479 739 DPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 739 ~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
++.+.....+||+.||++|||+.|+++
T Consensus 255 s~~~~~li~~~L~~dp~~R~s~~e~l~ 281 (484)
T 3nyv_A 255 SESAKDLIRKMLTYVPSMRISARDALD 281 (484)
T ss_dssp CHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence 666667777999999999999999985
No 227
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=99.98 E-value=1.6e-32 Score=298.26 Aligned_cols=226 Identities=23% Similarity=0.293 Sum_probs=181.5
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeeccc--------hhhHHHHHHHHHHHhcc-CCCCceeEEEEeecCCCCCce
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--------RGALKSFMAECQALRNI-RHRNLVKIITACSTSDFQGNY 596 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--------~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~ 596 (771)
...+|+|.+|.||+|+++.+++.||||++.... ....+.+.+|+.+++++ +||||+++++++...+
T Consensus 99 ~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~----- 173 (365)
T 2y7j_A 99 KDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSS----- 173 (365)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSS-----
T ss_pred ceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCC-----
Confidence 456899999999999999888899999996543 12356788999999999 7999999999998766
Q ss_pred eEEEEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCcccc
Q 041479 597 FRALVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673 (771)
Q Consensus 597 ~~~lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~ 673 (771)
..|+||||+++|+|.++ ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++...
T Consensus 174 ~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~ 250 (365)
T 2y7j_A 174 FMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFSCHL 250 (365)
T ss_dssp EEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEEecCccccc
Confidence 78999999999999776 34689999999999999999999986 9999999999999999999999999999866
Q ss_pred CcccCCcccccccccccccccchh---------------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCC
Q 041479 674 PEVMSSNQCSSVGLKGTVGYATPE---------------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPD 732 (771)
Q Consensus 674 ~~~~~~~~~~~~~~~gt~~y~aPE---------------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~ 732 (771)
..... ....+||+.|+||| +||++|||++|+.||.+.... ..+..........
T Consensus 251 ~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~-~~~~~i~~~~~~~ 324 (365)
T 2y7j_A 251 EPGEK-----LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQI-LMLRMIMEGQYQF 324 (365)
T ss_dssp CTTCC-----BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHTCCCC
T ss_pred CCCcc-----cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHH-HHHHHHHhCCCCC
Confidence 54321 22357999999999 599999999999999653211 1122222333322
Q ss_pred c--hhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 733 Q--ILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 733 ~--~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
. ....+++.+.....+||+.||++|||+.++++
T Consensus 325 ~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 325 SSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp CHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred CCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 1 22334555656677999999999999999986
No 228
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=99.98 E-value=9.1e-33 Score=291.07 Aligned_cols=238 Identities=18% Similarity=0.220 Sum_probs=184.8
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
+.....+|+|.+|+||+|++..+++.||||++..... .+++.+|+++++.++|++++..++++..... ..++||
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~----~~~lv~ 84 (296)
T 4hgt_A 11 YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGD----YNVMVM 84 (296)
T ss_dssp CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETT----EEEEEE
T ss_pred eEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCCC----ceEEEE
Confidence 3345568999999999999999999999998754432 2468889999999999888887777644331 679999
Q ss_pred EeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeee---CCCCceEEecccCccccCc
Q 041479 603 EFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLL---DNDMTAHMGDFGLTRFIPE 675 (771)
Q Consensus 603 e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl---~~~~~~kl~DfGla~~~~~ 675 (771)
||+ +|+|.++ ...+++.++..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++....
T Consensus 85 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~ 160 (296)
T 4hgt_A 85 ELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160 (296)
T ss_dssp ECC-CCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred Ecc-CCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCccceeccC
Confidence 999 8999776 35689999999999999999999996 89999999999999 7889999999999987654
Q ss_pred ccCCc---ccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccC--CccHHHHHHhhCCCc--
Q 041479 676 VMSSN---QCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTE--GLDLHNFVKMALPDQ-- 733 (771)
Q Consensus 676 ~~~~~---~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~--~~~~~~~~~~~~~~~-- 733 (771)
..... ........||+.|+||| +||++|||++|+.||.+.... ...+........+..
T Consensus 161 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (296)
T 4hgt_A 161 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIE 240 (296)
T ss_dssp TTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHH
T ss_pred cccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchhh
Confidence 32211 11223457999999999 699999999999999764322 122333333333222
Q ss_pred -hhhhcCccccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 734 -ILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 734 -~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
....+++.+.....+||+.||++|||+.++++.|+++
T Consensus 241 ~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 278 (296)
T 4hgt_A 241 VLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL 278 (296)
T ss_dssp HHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHH
T ss_pred hhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHH
Confidence 2244466666777799999999999999999999886
No 229
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=99.98 E-value=6.6e-33 Score=298.51 Aligned_cols=231 Identities=21% Similarity=0.199 Sum_probs=181.2
Q ss_pred cccccccccccccceEEEEEecCCCeEEEEEEeeccc-hhhHHHHHHHHHH-HhccCCCCceeEEEEeecCCCCCceeEE
Q 041479 522 DLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ-RGALKSFMAECQA-LRNIRHRNLVKIITACSTSDFQGNYFRA 599 (771)
Q Consensus 522 ~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~-l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 599 (771)
++.....+|+|.+|+||+|++..+++.||||++.... .....++..|+.+ ++.++||||+++++++.+.+ ..|
T Consensus 52 ~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~-----~~~ 126 (340)
T 3an0_A 52 DLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREG-----DVW 126 (340)
T ss_dssp CEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSS-----CEE
T ss_pred heeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCC-----cEE
Confidence 3444566899999999999999899999999996543 2334566666666 77889999999999998776 679
Q ss_pred EEEEeccCCCCCCC-------cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccc
Q 041479 600 LVYEFMHHGSLESC-------PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRF 672 (771)
Q Consensus 600 lv~e~~~~g~L~~~-------~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~ 672 (771)
+||||+++ +|.++ ...+++..+..++.|++.||+|||+. .+|+||||||+||+++.++.+||+|||+++.
T Consensus 127 lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~--~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~ 203 (340)
T 3an0_A 127 ICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQVKMCDFGISGY 203 (340)
T ss_dssp EEECCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHH--TCCCCCSCCSTTEEECSTTCEEECCCSHHHH
T ss_pred EEHHHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEeeCCCcee
Confidence 99999975 77554 34689999999999999999999974 3899999999999999999999999999986
Q ss_pred cCcccCCcccccccccccccccchh-------------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCc
Q 041479 673 IPEVMSSNQCSSVGLKGTVGYATPE-------------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQ 733 (771)
Q Consensus 673 ~~~~~~~~~~~~~~~~gt~~y~aPE-------------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~ 733 (771)
..... ......||+.|+||| +||++|||++|+.||.........+.+......+..
T Consensus 204 ~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~ 278 (340)
T 3an0_A 204 LVDSV-----AKTIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQL 278 (340)
T ss_dssp HSCHH-----HHHHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCC
T ss_pred ccccc-----ccccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCCCCccccchHHHHHHHhcCCCCCC
Confidence 54321 112246899999999 599999999999999753222222333333333333
Q ss_pred hhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 734 ILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 734 ~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
....+++.+...+.+||+.||++|||+.|+++
T Consensus 279 ~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 279 PADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp CGGGSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CcccCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 33445666767777999999999999999985
No 230
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=99.98 E-value=4.2e-33 Score=294.69 Aligned_cols=230 Identities=21% Similarity=0.221 Sum_probs=180.2
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
+.....+|+|.+|+||+|+++.+++.||+|++........+++.+|++++++++||||+++++++...+ ..++||
T Consensus 21 y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~lv~ 95 (302)
T 2j7t_A 21 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDG-----KLWIMI 95 (302)
T ss_dssp EEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC------CEEEEE
T ss_pred eeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCC-----eEEEEE
Confidence 444566899999999999999988899999997666666789999999999999999999999998766 679999
Q ss_pred EeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccC
Q 041479 603 EFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMS 678 (771)
Q Consensus 603 e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 678 (771)
||+++|+|.++ ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.......
T Consensus 96 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 171 (302)
T 2j7t_A 96 EFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTL- 171 (302)
T ss_dssp ECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHH-
T ss_pred EeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECCCCccccccc-
Confidence 99999999765 35689999999999999999999996 99999999999999999999999999876332111
Q ss_pred Ccccccccccccccccchh--------------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCC-Cchhhh
Q 041479 679 SNQCSSVGLKGTVGYATPE--------------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALP-DQILQV 737 (771)
Q Consensus 679 ~~~~~~~~~~gt~~y~aPE--------------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~-~~~~~~ 737 (771)
.......||+.|+||| +|+++|||++|+.||.+..... ..........+ ...+..
T Consensus 172 ---~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~ 247 (302)
T 2j7t_A 172 ---QKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMR-VLLKIAKSDPPTLLTPSK 247 (302)
T ss_dssp ---HC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHHSCCCCCSSGGG
T ss_pred ---cccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHH-HHHHHhccCCcccCCccc
Confidence 1122346899999999 5999999999999997542211 12223332222 123344
Q ss_pred cCccccccCcccChhchhhcCCHHHHHH
Q 041479 738 LDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 738 ~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
++..+.....+||+.||++|||+.++++
T Consensus 248 ~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 248 WSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp SCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred cCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 5556666777999999999999999975
No 231
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=99.98 E-value=3.2e-32 Score=285.51 Aligned_cols=222 Identities=19% Similarity=0.209 Sum_probs=180.3
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhcc-CCCCceeEEEEeecCCCCCceeEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNI-RHRNLVKIITACSTSDFQGNYFRA 599 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~~~~ 599 (771)
+.....+|+|.+|+||+|++..+++.||||++.... .....++.+|+..+.++ +||||+++++++.+.+ ..+
T Consensus 13 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~-----~~~ 87 (289)
T 1x8b_A 13 FHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDD-----HML 87 (289)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETT-----EEE
T ss_pred hhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCC-----eEE
Confidence 334456899999999999999888899999997542 34467889999999999 8999999999998776 789
Q ss_pred EEEEeccCCCCCCCc-------ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCC--------------
Q 041479 600 LVYEFMHHGSLESCP-------RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN-------------- 658 (771)
Q Consensus 600 lv~e~~~~g~L~~~~-------~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~-------------- 658 (771)
+||||+++|+|.++. ..+++.++..++.|++.||+|||+. +|+||||||+||+++.
T Consensus 88 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~ 164 (289)
T 1x8b_A 88 IQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDED 164 (289)
T ss_dssp EEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC---------------
T ss_pred EEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCcccccccccc
Confidence 999999999998762 4589999999999999999999996 9999999999999984
Q ss_pred -----CCceEEecccCccccCcccCCcccccccccccccccchh----------------HHHHHHHHHhCCCCCCcccc
Q 041479 659 -----DMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFT 717 (771)
Q Consensus 659 -----~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~ 717 (771)
...+||+|||.++...... ...||+.|+||| +||++||+++|..|+..
T Consensus 165 ~~~~~~~~~kl~Dfg~~~~~~~~~--------~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~--- 233 (289)
T 1x8b_A 165 DWASNKVMFKIGDLGHVTRISSPQ--------VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRN--- 233 (289)
T ss_dssp -----CCCEEECCCTTCEETTCSC--------CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSS---
T ss_pred cccCCceEEEEcccccccccCCcc--------ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcc---
Confidence 4479999999998654322 235899999999 69999999999877643
Q ss_pred CCccHHHHHHhhCCCchhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 718 EGLDLHNFVKMALPDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 718 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
......+..... ...+..+++.+.....+||+.||++|||+.|+++
T Consensus 234 -~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 279 (289)
T 1x8b_A 234 -GDQWHEIRQGRL-PRIPQVLSQEFTELLKVMIHPDPERRPSAMALVK 279 (289)
T ss_dssp -SHHHHHHHTTCC-CCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred -hhHHHHHHcCCC-CCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhh
Confidence 122333333332 3344556666767777999999999999999985
No 232
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=99.98 E-value=2.1e-32 Score=288.30 Aligned_cols=238 Identities=18% Similarity=0.218 Sum_probs=185.7
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
+.....+|+|.+|+||+|++..+++.||||++..... .+++.+|+.+++.++|++++..++++...+. ..++||
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~----~~~lv~ 84 (296)
T 3uzp_A 11 YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGD----YNVMVM 84 (296)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETT----EEEEEE
T ss_pred EEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCC----ceEEEE
Confidence 3345568999999999999999999999999865432 2468899999999999887777777644331 679999
Q ss_pred EeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeee---CCCCceEEecccCccccCc
Q 041479 603 EFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLL---DNDMTAHMGDFGLTRFIPE 675 (771)
Q Consensus 603 e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl---~~~~~~kl~DfGla~~~~~ 675 (771)
||+ +|+|.++ ...+++.++..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++....
T Consensus 85 e~~-~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~ 160 (296)
T 3uzp_A 85 ELL-GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRD 160 (296)
T ss_dssp ECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBC
T ss_pred Eec-CCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccc
Confidence 999 8999766 34689999999999999999999996 99999999999999 4788999999999987654
Q ss_pred ccCCc---ccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccC--CccHHHHHHhhCCC---
Q 041479 676 VMSSN---QCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTE--GLDLHNFVKMALPD--- 732 (771)
Q Consensus 676 ~~~~~---~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~--~~~~~~~~~~~~~~--- 732 (771)
..... ........||+.|+||| +||++|||++|+.||.+.... ...+..+.....+.
T Consensus 161 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (296)
T 3uzp_A 161 ARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIE 240 (296)
T ss_dssp TTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHH
T ss_pred cccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCchH
Confidence 32211 11223457999999999 699999999999999764321 12233333332222
Q ss_pred chhhhcCccccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 733 QILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 733 ~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
.....+++.+.....+||+.||++|||+.++++.|+++
T Consensus 241 ~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~ 278 (296)
T 3uzp_A 241 VLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNL 278 (296)
T ss_dssp HHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHH
T ss_pred HHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHH
Confidence 22344566666777799999999999999999999876
No 233
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=99.98 E-value=2.7e-32 Score=284.47 Aligned_cols=228 Identities=25% Similarity=0.315 Sum_probs=177.2
Q ss_pred cccccccccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeE
Q 041479 522 DLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFR 598 (771)
Q Consensus 522 ~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 598 (771)
.+.....+|+|.+|+||+|+++.+++.||||++.... ....+.+.+|+++++.++||||+++++++.+.+ ..
T Consensus 12 ~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~ 86 (276)
T 2h6d_A 12 HYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPT-----DF 86 (276)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS-----EE
T ss_pred cEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCC-----eE
Confidence 3444567899999999999999888899999996543 234578999999999999999999999998776 78
Q ss_pred EEEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCc
Q 041479 599 ALVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPE 675 (771)
Q Consensus 599 ~lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~ 675 (771)
|+||||+++++|.++ ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 87 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~ 163 (276)
T 2h6d_A 87 FMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSD 163 (276)
T ss_dssp EEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC
T ss_pred EEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecccccccCC
Confidence 999999999999776 34688999999999999999999996 899999999999999999999999999986543
Q ss_pred ccCCcccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcC
Q 041479 676 VMSSNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLD 739 (771)
Q Consensus 676 ~~~~~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 739 (771)
... .....||+.|+||| +|+++|||++|+.||.+... ....+...... ...+..++
T Consensus 164 ~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--~~~~~~~~~~~-~~~~~~~~ 235 (276)
T 2h6d_A 164 GEF-----LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHV--PTLFKKIRGGV-FYIPEYLN 235 (276)
T ss_dssp ------------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSH--HHHHHHHHHCC-CCCCTTSC
T ss_pred Ccc-----eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcH--HHHHHHhhcCc-ccCchhcC
Confidence 221 12346899999999 69999999999999975321 11222222221 12234455
Q ss_pred ccccccCcccChhchhhcCCHHHHHH
Q 041479 740 PLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 740 ~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
+.+.....+||+.||++|||+.|+++
T Consensus 236 ~~l~~li~~~l~~~p~~Rps~~~~l~ 261 (276)
T 2h6d_A 236 RSVATLLMHMLQVDPLKRATIKDIRE 261 (276)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHHccCChhhCCCHHHHHh
Confidence 56666677999999999999999986
No 234
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=99.98 E-value=1.4e-32 Score=312.00 Aligned_cols=229 Identities=21% Similarity=0.197 Sum_probs=182.4
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccch-------------hhHHHHHHHHHHHhccCCCCceeEEEEeec
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQR-------------GALKSFMAECQALRNIRHRNLVKIITACST 589 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~-------------~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~ 589 (771)
+.....+|+|.+|+||+|+++.+++.||||++..... ...+.+.+|++++++++|||||++++++.+
T Consensus 38 Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~ 117 (504)
T 3q5i_A 38 YFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFED 117 (504)
T ss_dssp EEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEEEC
T ss_pred eEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc
Confidence 3345578999999999999999999999999965421 335789999999999999999999999987
Q ss_pred CCCCCceeEEEEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCC---ceE
Q 041479 590 SDFQGNYFRALVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDM---TAH 663 (771)
Q Consensus 590 ~~~~~~~~~~lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~---~~k 663 (771)
.. ..|+|||||++|+|.+. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+|
T Consensus 118 ~~-----~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~k 189 (504)
T 3q5i_A 118 KK-----YFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLNIK 189 (504)
T ss_dssp SS-----EEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCSSEE
T ss_pred CC-----EEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCccEE
Confidence 76 78999999999999765 35689999999999999999999996 999999999999998765 699
Q ss_pred EecccCccccCcccCCcccccccccccccccchh--------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhh
Q 041479 664 MGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE--------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMA 729 (771)
Q Consensus 664 l~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE--------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~ 729 (771)
|+|||+++...... .....+||+.|+||| +||++|||++|+.||.+.... ..+..+....
T Consensus 190 l~Dfg~a~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~-~~~~~i~~~~ 263 (504)
T 3q5i_A 190 IVDFGLSSFFSKDY-----KLRDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQ-DIIKKVEKGK 263 (504)
T ss_dssp ECCCTTCEECCTTS-----CBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHCC
T ss_pred EEECCCCEEcCCCC-----ccccccCCcCCCCHHHhccCCCchHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHcCC
Confidence 99999998665432 122356999999999 699999999999999763221 1123333333
Q ss_pred CC--CchhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 730 LP--DQILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 730 ~~--~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
.. ......+++.+.....+||+.||++|||+.|+++
T Consensus 264 ~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~ 301 (504)
T 3q5i_A 264 YYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALN 301 (504)
T ss_dssp CCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 32 2233455666667777999999999999999984
No 235
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=99.98 E-value=9.8e-33 Score=292.26 Aligned_cols=228 Identities=20% Similarity=0.221 Sum_probs=180.8
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
+.....+|+|.+|+||+|++..+++.||||++........+.+.+|++++++++||||+++++++.+.+ ..|+||
T Consensus 11 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~lv~ 85 (304)
T 2jam_A 11 FIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTT-----HYYLVM 85 (304)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSS-----EEEEEE
T ss_pred ceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCC-----EEEEEE
Confidence 334556899999999999999888899999997655445577899999999999999999999998766 789999
Q ss_pred EeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeee---CCCCceEEecccCccccCcc
Q 041479 603 EFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLL---DNDMTAHMGDFGLTRFIPEV 676 (771)
Q Consensus 603 e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl---~~~~~~kl~DfGla~~~~~~ 676 (771)
||+++|+|.++ ...+++.++..++.|++.||+|||+. +|+||||||+||++ +.++.+||+|||+++.....
T Consensus 86 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~ 162 (304)
T 2jam_A 86 QLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG 162 (304)
T ss_dssp CCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB
T ss_pred EcCCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCCcceecCCC
Confidence 99999999766 34688999999999999999999986 99999999999999 77889999999999754332
Q ss_pred cCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCC--CchhhhcC
Q 041479 677 MSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALP--DQILQVLD 739 (771)
Q Consensus 677 ~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 739 (771)
. .....||+.|+||| +||++|||++|+.||.+.... .....+.....+ ......++
T Consensus 163 ~------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~ 235 (304)
T 2jam_A 163 I------MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETES-KLFEKIKEGYYEFESPFWDDIS 235 (304)
T ss_dssp T------THHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHH-HHHHHHHHCCCCCCTTTTTTSC
T ss_pred c------cccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHH-HHHHHHHcCCCCCCccccccCC
Confidence 1 12346899999999 699999999999999753221 112222232222 23334556
Q ss_pred ccccccCcccChhchhhcCCHHHHHH
Q 041479 740 PLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 740 ~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
+.+.....+|+..||++|||+.++++
T Consensus 236 ~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 236 ESAKDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp HHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred HHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 66666777999999999999999985
No 236
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=99.98 E-value=1.3e-32 Score=293.89 Aligned_cols=227 Identities=21% Similarity=0.246 Sum_probs=177.7
Q ss_pred cccccccccccceEEEEEecCCCeEEEEEEeeccc--------hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCc
Q 041479 524 LLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--------RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGN 595 (771)
Q Consensus 524 ~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--------~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~ 595 (771)
.....+|+|.+|+||+|+++.+++.||||++.... ......+.+|++++++++||||+++++++...+
T Consensus 13 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~---- 88 (322)
T 2ycf_A 13 IMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED---- 88 (322)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS----
T ss_pred eEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc----
Confidence 34456899999999999999999999999996432 122346889999999999999999999986543
Q ss_pred eeEEEEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCc---eEEecccC
Q 041479 596 YFRALVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMT---AHMGDFGL 669 (771)
Q Consensus 596 ~~~~lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~---~kl~DfGl 669 (771)
.|+||||+++|+|.++ ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||+
T Consensus 89 --~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~ 163 (322)
T 2ycf_A 89 --YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGH 163 (322)
T ss_dssp --EEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEECCCTT
T ss_pred --eEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEccCcc
Confidence 5899999999999765 34688999999999999999999986 9999999999999987654 99999999
Q ss_pred ccccCcccCCcccccccccccccccchh------------------HHHHHHHHHhCCCCCCccccCCccHHHHHHh-hC
Q 041479 670 TRFIPEVMSSNQCSSVGLKGTVGYATPE------------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKM-AL 730 (771)
Q Consensus 670 a~~~~~~~~~~~~~~~~~~gt~~y~aPE------------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~-~~ 730 (771)
++...... ......||+.|+||| +||++|||++|+.||.+..... .+...... ..
T Consensus 164 ~~~~~~~~-----~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~ 237 (322)
T 2ycf_A 164 SKILGETS-----LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQV-SLKDQITSGKY 237 (322)
T ss_dssp CEECCCCH-----HHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSS-CHHHHHHHTCC
T ss_pred ceeccccc-----ccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHH-HHHHHHHhCcc
Confidence 98654321 112346899999999 6999999999999997643322 23333332 22
Q ss_pred C--CchhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 731 P--DQILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 731 ~--~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
+ ......+++.+.....+||+.||++|||+.++++
T Consensus 238 ~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 238 NFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp CCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred ccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 2 2233445566666777999999999999999985
No 237
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=99.98 E-value=1.1e-32 Score=289.71 Aligned_cols=237 Identities=25% Similarity=0.280 Sum_probs=176.8
Q ss_pred ccccccccccccceEEEEEecCC-C--eEEEEEEeecc---chhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCce
Q 041479 523 LLLNVSYESLVKATVYKGILDLD-Q--TFIAVKVLFLH---QRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNY 596 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~-~--~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~ 596 (771)
+.....+|+|.+|+||+|++... + ..||||++... .....+++.+|++++++++||||+++++++.+..
T Consensus 20 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~----- 94 (291)
T 1u46_A 20 LRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP----- 94 (291)
T ss_dssp EEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-----
T ss_pred eeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-----
Confidence 44455689999999999987542 2 36999998654 2345678999999999999999999999987653
Q ss_pred eEEEEEEeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccc
Q 041479 597 FRALVYEFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRF 672 (771)
Q Consensus 597 ~~~lv~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~ 672 (771)
.++||||+++|+|.++ ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.
T Consensus 95 -~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg~~~~ 170 (291)
T 1u46_A 95 -MKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFGLMRA 170 (291)
T ss_dssp -CEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCTTCEE
T ss_pred -ceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEcccccccc
Confidence 5899999999999776 34588999999999999999999996 999999999999999999999999999987
Q ss_pred cCcccCCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhh
Q 041479 673 IPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQ 736 (771)
Q Consensus 673 ~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 736 (771)
....... ........||+.|+||| +|+++|||++ |+.||.+.... ...........+.....
T Consensus 171 ~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~ 248 (291)
T 1u46_A 171 LPQNDDH-YVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGS-QILHKIDKEGERLPRPE 248 (291)
T ss_dssp CCC-CCE-EEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHH-HHHHHHHTSCCCCCCCT
T ss_pred ccccccc-hhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHH-HHHHHHHccCCCCCCCc
Confidence 6543221 11122345788999999 6999999999 99999754221 11222222222333344
Q ss_pred hcCccccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 737 VLDPLFLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 737 ~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
.+++.+.....+||+.||++|||+.++++.|+++
T Consensus 249 ~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~ 282 (291)
T 1u46_A 249 DCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEA 282 (291)
T ss_dssp TCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHh
Confidence 4556666677799999999999999999999875
No 238
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=99.98 E-value=7.5e-33 Score=300.56 Aligned_cols=231 Identities=22% Similarity=0.257 Sum_probs=180.7
Q ss_pred cccccccccccccceEEEEEecCCCeEEEEEEeecc-chhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEE
Q 041479 522 DLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLH-QRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRAL 600 (771)
Q Consensus 522 ~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~l 600 (771)
.+.....+|+|.+|+||+|++..+++.||+|++... .....+.+.+|++++++++||||+++++++.+.+ ..++
T Consensus 34 ~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~~l 108 (360)
T 3eqc_A 34 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDG-----EISI 108 (360)
T ss_dssp GEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETT-----EEEE
T ss_pred cceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECC-----EEEE
Confidence 344556789999999999999999999999999765 3445678999999999999999999999998876 7899
Q ss_pred EEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCccc
Q 041479 601 VYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVM 677 (771)
Q Consensus 601 v~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~ 677 (771)
||||+++|+|.++ ...+++..+..++.|++.||+|||+. .+|+||||||+||+++.++.+||+|||+++......
T Consensus 109 v~e~~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~--~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 186 (360)
T 3eqc_A 109 CMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM 186 (360)
T ss_dssp EECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHH--HCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC
T ss_pred EEECCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHh--CCEEcCCccHHHEEECCCCCEEEEECCCCccccccc
Confidence 9999999999876 34688999999999999999999983 279999999999999999999999999997543221
Q ss_pred CCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCc----------------------
Q 041479 678 SSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGL---------------------- 720 (771)
Q Consensus 678 ~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~---------------------- 720 (771)
.....||+.|+||| +||++|||++|+.||........
T Consensus 187 ------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (360)
T 3eqc_A 187 ------ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTP 260 (360)
T ss_dssp ----------CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC-----------------
T ss_pred ------ccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccC
Confidence 12346899999999 69999999999999964321110
Q ss_pred ------------------cHHHHHHhhCC-CchhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 721 ------------------DLHNFVKMALP-DQILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 721 ------------------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
...+......+ ......++..+.....+||+.||++|||+.|+++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 324 (360)
T 3eqc_A 261 GRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 324 (360)
T ss_dssp -------------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred CCcccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 00011111111 1112233445555667999999999999999985
No 239
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=99.98 E-value=2.6e-32 Score=303.45 Aligned_cols=187 Identities=20% Similarity=0.239 Sum_probs=150.6
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeecc--chhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLH--QRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRAL 600 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~l 600 (771)
+.....+|+|.+|+||+|+++.+++.||||++... .....+++.+|++++++++|||||++++++...+.......|+
T Consensus 28 y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~l 107 (432)
T 3n9x_A 28 YIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYI 107 (432)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEE
T ss_pred EEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEEE
Confidence 34455689999999999999999999999999643 3345678999999999999999999999997765433336899
Q ss_pred EEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCccc
Q 041479 601 VYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVM 677 (771)
Q Consensus 601 v~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~ 677 (771)
||||++ |+|.++ ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+|+......
T Consensus 108 v~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~ 183 (432)
T 3n9x_A 108 VLEIAD-SDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEK 183 (432)
T ss_dssp EEECCS-EEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEEC----
T ss_pred EEecCC-cCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCCCcccccccc
Confidence 999996 588665 34589999999999999999999996 99999999999999999999999999998764332
Q ss_pred CCc------------------ccccccccccccccchh----------------HHHHHHHHHhCCCCCC
Q 041479 678 SSN------------------QCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTS 713 (771)
Q Consensus 678 ~~~------------------~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~ 713 (771)
... .......+||+.|+||| +||++|||++|..||.
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~ 253 (432)
T 3n9x_A 184 DTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHI 253 (432)
T ss_dssp ---------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTC
T ss_pred cccccccccccccccccccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhcccccc
Confidence 110 01224567999999999 6999999998766553
No 240
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=99.98 E-value=8.5e-33 Score=296.15 Aligned_cols=230 Identities=20% Similarity=0.245 Sum_probs=169.9
Q ss_pred cccccccccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEE
Q 041479 522 DLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRA 599 (771)
Q Consensus 522 ~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 599 (771)
.+.....+|+|.+|+||+|++..+++.||||++.... ....+.+.+|++++++++|||||++++++.+.+ ..+
T Consensus 35 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~~ 109 (329)
T 3gbz_A 35 RYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNH-----RLH 109 (329)
T ss_dssp GEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETT-----EEE
T ss_pred hEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCC-----EEE
Confidence 3445567899999999999999999999999996543 233567889999999999999999999998876 789
Q ss_pred EEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeee-----CCCCceEEecccCcc
Q 041479 600 LVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLL-----DNDMTAHMGDFGLTR 671 (771)
Q Consensus 600 lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl-----~~~~~~kl~DfGla~ 671 (771)
+||||+++ +|.++ ...+++..+..++.|++.||+|||+. +|+||||||+||++ +..+.+||+|||+++
T Consensus 110 lv~e~~~~-~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~ 185 (329)
T 3gbz_A 110 LIFEYAEN-DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR 185 (329)
T ss_dssp EEEECCSE-EHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTTHHH
T ss_pred EEEecCCC-CHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCCCcc
Confidence 99999984 87665 34688999999999999999999996 99999999999999 445569999999998
Q ss_pred ccCcccCCcccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHh-hCCC--
Q 041479 672 FIPEVMSSNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKM-ALPD-- 732 (771)
Q Consensus 672 ~~~~~~~~~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~-~~~~-- 732 (771)
....... ......||+.|+||| +||++|||++|+.||.+..... .+...... ..+.
T Consensus 186 ~~~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~~~~~~~~~~~~ 260 (329)
T 3gbz_A 186 AFGIPIR----QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEID-QLFKIFEVLGLPDDT 260 (329)
T ss_dssp HHC---------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCTT
T ss_pred ccCCccc----ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHH-HHHHHHHHhCCCchh
Confidence 6543221 122346899999999 6999999999999996532211 12222211 1110
Q ss_pred -------------------------chhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 733 -------------------------QILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 733 -------------------------~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
.....+++.+.....+||+.||++|||+.|+++
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 318 (329)
T 3gbz_A 261 TWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALE 318 (329)
T ss_dssp TSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhC
Confidence 011113444445566999999999999999985
No 241
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=99.98 E-value=1.4e-32 Score=294.82 Aligned_cols=232 Identities=20% Similarity=0.246 Sum_probs=177.0
Q ss_pred ccccccccccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeE
Q 041479 521 KDLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFR 598 (771)
Q Consensus 521 ~~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 598 (771)
..+.....+|+|.+|+||+|++..+++.||||++.... ....+.+.+|++++++++||||+++++++.+.+ ..
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~ 99 (331)
T 4aaa_A 25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKK-----RW 99 (331)
T ss_dssp GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETT-----EE
T ss_pred hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCC-----EE
Confidence 44555667999999999999999989999999986543 334567889999999999999999999998776 78
Q ss_pred EEEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCc
Q 041479 599 ALVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPE 675 (771)
Q Consensus 599 ~lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~ 675 (771)
++||||++++++..+ ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++....
T Consensus 100 ~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 176 (331)
T 4aaa_A 100 YLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAA 176 (331)
T ss_dssp EEEEECCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCTTC-----
T ss_pred EEEEecCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCCCceeecC
Confidence 999999999888665 45689999999999999999999996 999999999999999999999999999986543
Q ss_pred ccCCcccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhh--CCC-----
Q 041479 676 VMSSNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMA--LPD----- 732 (771)
Q Consensus 676 ~~~~~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~--~~~----- 732 (771)
... ......||+.|+||| +||++|||++|+.||.+..... .+..+.... .++
T Consensus 177 ~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~ 251 (331)
T 4aaa_A 177 PGE----VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDID-QLYHIMMCLGNLIPRHQEL 251 (331)
T ss_dssp -----------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCSCCHHHHHH
T ss_pred Ccc----ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHHHhCCCChhhhhH
Confidence 221 122346899999999 6999999999999996532111 111111110 000
Q ss_pred ----------------------chhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 733 ----------------------QILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 733 ----------------------~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
.....+++.+.....+||+.||++|||+.|+++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 252 FNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp HHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred hhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 001123444445566999999999999999875
No 242
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=99.98 E-value=3.4e-32 Score=295.83 Aligned_cols=237 Identities=19% Similarity=0.169 Sum_probs=183.2
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccc-hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALV 601 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv 601 (771)
+.....+|+|.+|+||+|++..+++.||||++.... ....+.+.+|++++++++||||+++++++...........|+|
T Consensus 29 y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~iv 108 (364)
T 3qyz_A 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIV 108 (364)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEE
T ss_pred EEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEEE
Confidence 334456899999999999999999999999996433 3445789999999999999999999999977654444467999
Q ss_pred EEeccCCCCCCC--cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCC
Q 041479 602 YEFMHHGSLESC--PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSS 679 (771)
Q Consensus 602 ~e~~~~g~L~~~--~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 679 (771)
|||++ |+|.++ ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 109 ~e~~~-~~L~~~l~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~ 184 (364)
T 3qyz_A 109 QDLME-TDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 184 (364)
T ss_dssp EECCS-EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCB
T ss_pred EcccC-cCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCcceEecCCCCCc
Confidence 99997 477665 34689999999999999999999996 9999999999999999999999999999876543221
Q ss_pred cccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCC-----------
Q 041479 680 NQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPD----------- 732 (771)
Q Consensus 680 ~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~----------- 732 (771)
.......+||+.|+||| +||++|||++|+.||.+..... .+..+......+
T Consensus 185 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~ 262 (364)
T 3qyz_A 185 -TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLD-QLNHILGILGSPSQEDLNCIINL 262 (364)
T ss_dssp -CCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGG-HHHHHHHHHCSCCHHHHHTCCCH
T ss_pred -cccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHH-HHHHHHHHhCCCCHHHHHHhhhh
Confidence 11123457999999999 6999999999999997532221 122221111000
Q ss_pred ------------------chhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 733 ------------------QILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 733 ------------------~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
.....+++.+.....+||+.||++|||+.|+++
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 313 (364)
T 3qyz_A 263 KARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALA 313 (364)
T ss_dssp HHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 011223444555666999999999999999985
No 243
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=99.98 E-value=2.3e-32 Score=290.72 Aligned_cols=227 Identities=21% Similarity=0.253 Sum_probs=179.5
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
+.....+|+|.+|+||+|+++.+++.||||++.... ..+++.+|+.++++++||||+++++++.+.+ ..|+||
T Consensus 31 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~lv~ 103 (314)
T 3com_A 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNT-----DLWIVM 103 (314)
T ss_dssp EEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETT-----EEEEEE
T ss_pred hhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCC-----EEEEEe
Confidence 334456899999999999999988899999996543 3467899999999999999999999998766 789999
Q ss_pred EeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccC
Q 041479 603 EFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMS 678 (771)
Q Consensus 603 e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 678 (771)
||+++|+|.++ ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 104 e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 180 (314)
T 3com_A 104 EYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMA 180 (314)
T ss_dssp ECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBS
T ss_pred ecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecccchhhhhhcc
Confidence 99999999876 34689999999999999999999986 999999999999999999999999999976543221
Q ss_pred Ccccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCC--CchhhhcCcc
Q 041479 679 SNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALP--DQILQVLDPL 741 (771)
Q Consensus 679 ~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 741 (771)
......||+.|+||| +|+++|||++|+.||.+..... .........+ ......+++.
T Consensus 181 ----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 254 (314)
T 3com_A 181 ----KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMR--AIFMIPTNPPPTFRKPELWSDN 254 (314)
T ss_dssp ----CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH--HHHHHHHSCCCCCSSGGGSCHH
T ss_pred ----ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHH--HHHHHhcCCCcccCCcccCCHH
Confidence 122356899999999 6999999999999997532211 1111112222 2234445666
Q ss_pred ccccCcccChhchhhcCCHHHHHH
Q 041479 742 FLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 742 ~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
+.....+||+.||++|||+.++++
T Consensus 255 l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 255 FTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp HHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred HHHHHHHHccCChhhCcCHHHHHh
Confidence 666777999999999999999975
No 244
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=99.98 E-value=2.9e-32 Score=294.43 Aligned_cols=227 Identities=20% Similarity=0.249 Sum_probs=180.5
Q ss_pred cccccccccccccceEEEEEecCCCeEEEEEEeeccchhh-----------------HHHHHHHHHHHhccCCCCceeEE
Q 041479 522 DLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGA-----------------LKSFMAECQALRNIRHRNLVKII 584 (771)
Q Consensus 522 ~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~-----------------~~~~~~E~~~l~~l~H~nIv~l~ 584 (771)
.+.....+|+|.+|+||+|++ +++.||||++....... .+.+.+|++++++++||||++++
T Consensus 32 ~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~ 109 (348)
T 2pml_X 32 DYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCE 109 (348)
T ss_dssp TEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCS
T ss_pred ceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEE
Confidence 444556789999999999998 67799999996543211 27899999999999999999999
Q ss_pred EEeecCCCCCceeEEEEEEeccCCCCCCC-----------cccCCHHHHHHHHHHHHHHHHHHHh-cCCCCeEecCCCCC
Q 041479 585 TACSTSDFQGNYFRALVYEFMHHGSLESC-----------PRILSFLRRLNIAIDVASALEYLHH-HCKKPIVHCDLKPS 652 (771)
Q Consensus 585 ~~~~~~~~~~~~~~~lv~e~~~~g~L~~~-----------~~~l~~~~~~~i~~~ia~gL~~LH~-~~~~~ivHrdlk~~ 652 (771)
+++.+.+ ..|+||||+++|+|.++ ...+++..+..++.|++.||+|||+ . +|+||||||+
T Consensus 110 ~~~~~~~-----~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~ 181 (348)
T 2pml_X 110 GIITNYD-----EVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPS 181 (348)
T ss_dssp EEEESSS-----EEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGG
T ss_pred EEEeeCC-----eEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChH
Confidence 9998876 78999999999999876 4568899999999999999999998 5 9999999999
Q ss_pred CeeeCCCCceEEecccCccccCcccCCcccccccccccccccchh-----------------HHHHHHHHHhCCCCCCcc
Q 041479 653 NVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE-----------------YGILLLEIFTGKRPTSDM 715 (771)
Q Consensus 653 NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE-----------------~Gv~l~el~tg~~P~~~~ 715 (771)
||+++.++.+||+|||+++..... ......||+.|+||| +||++|||++|+.||...
T Consensus 182 Nil~~~~~~~kl~dfg~~~~~~~~------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 255 (348)
T 2pml_X 182 NILMDKNGRVKLSDFGESEYMVDK------KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLK 255 (348)
T ss_dssp GEEECTTSCEEECCCTTCEECBTT------EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred hEEEcCCCcEEEeccccccccccc------cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 999999999999999999865432 122346899999999 699999999999999754
Q ss_pred ccCCccHHHHHH-hhCCCch-----------------hhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 716 FTEGLDLHNFVK-MALPDQI-----------------LQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 716 ~~~~~~~~~~~~-~~~~~~~-----------------~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
... ....+... ...+... ...+++.+.....+||+.||++|||+.|+++
T Consensus 256 ~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 256 ISL-VELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp SCS-HHHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred CcH-HHHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 221 22222222 2111110 0334555556667999999999999999986
No 245
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=99.98 E-value=7.3e-33 Score=299.67 Aligned_cols=236 Identities=17% Similarity=0.168 Sum_probs=181.4
Q ss_pred ccccccccccccceEEEEEecC--------CCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCcee------------
Q 041479 523 LLLNVSYESLVKATVYKGILDL--------DQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVK------------ 582 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~--------~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~------------ 582 (771)
+.....+|+|.+|+||+|++.. .++.||||++... +.+.+|++++++++|||||+
T Consensus 44 y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~ 118 (352)
T 2jii_A 44 WKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLA 118 (352)
T ss_dssp EEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTTCS
T ss_pred EEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCccC
Confidence 4445678999999999999987 3679999999643 46889999999999999998
Q ss_pred ---EEEEeecCCCCCceeEEEEEEeccCCCCCCC-----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCe
Q 041479 583 ---IITACSTSDFQGNYFRALVYEFMHHGSLESC-----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNV 654 (771)
Q Consensus 583 ---l~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~-----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NI 654 (771)
+++++...+ ...|+||||+ +|+|.++ ...+++.++..++.|++.||+|||+. +|+||||||+||
T Consensus 119 i~~~~~~~~~~~----~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NI 190 (352)
T 2jii_A 119 IPTCMGFGVHQD----KYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAENI 190 (352)
T ss_dssp CCCCCEEEEETT----TEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGGGE
T ss_pred ccchhhccccCC----cEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHE
Confidence 566765522 1689999999 9999877 25689999999999999999999996 999999999999
Q ss_pred eeCCCC--ceEEecccCccccCcccCCc---ccccccccccccccchh---------------HHHHHHHHHhCCCCCCc
Q 041479 655 LLDNDM--TAHMGDFGLTRFIPEVMSSN---QCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSD 714 (771)
Q Consensus 655 Ll~~~~--~~kl~DfGla~~~~~~~~~~---~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~ 714 (771)
+++.++ .+||+|||+++......... ........||+.|+||| +||++|||++|+.||.+
T Consensus 191 l~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~ 270 (352)
T 2jii_A 191 FVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTN 270 (352)
T ss_dssp EEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGG
T ss_pred EEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCccc
Confidence 999988 89999999998765433211 11123457999999999 69999999999999976
Q ss_pred cccCCccHHHHHHh--hCCCchh------hhcCccccccCcccChhchhhcCCHHHHHHHHHHhC
Q 041479 715 MFTEGLDLHNFVKM--ALPDQIL------QVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAIL 771 (771)
Q Consensus 715 ~~~~~~~~~~~~~~--~~~~~~~------~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~l 771 (771)
.......+...... ..+.... ..+++.+.....+||+.||++|||+.++++.|++++
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~~ 335 (352)
T 2jii_A 271 CLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRNNLEALL 335 (352)
T ss_dssp GTTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHHH
T ss_pred CCcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHHHHHHHH
Confidence 53222222222221 1111111 123555666777999999999999999999999863
No 246
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=99.98 E-value=1.6e-32 Score=297.22 Aligned_cols=234 Identities=20% Similarity=0.191 Sum_probs=183.2
Q ss_pred ccccccccccccccceEEEEEec---CCCeEEEEEEeeccc----hhhHHHHHHHHHHHhcc-CCCCceeEEEEeecCCC
Q 041479 521 KDLLLNVSYESLVKATVYKGILD---LDQTFIAVKVLFLHQ----RGALKSFMAECQALRNI-RHRNLVKIITACSTSDF 592 (771)
Q Consensus 521 ~~~~~~~~l~~~~~~~Vy~~~~~---~~~~~vAvK~~~~~~----~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~ 592 (771)
..+.....+|+|.+|+||+|+.. .+++.||||++.... ....+.+.+|+++++++ +||||+++++++...+
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~- 132 (355)
T 1vzo_A 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET- 132 (355)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT-
T ss_pred cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc-
Confidence 34445567899999999999984 467799999996432 23446778899999999 6999999999998776
Q ss_pred CCceeEEEEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccC
Q 041479 593 QGNYFRALVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGL 669 (771)
Q Consensus 593 ~~~~~~~lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGl 669 (771)
..++||||+++|+|.++ ...+++.++..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+
T Consensus 133 ----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG~ 205 (355)
T 1vzo_A 133 ----KLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFGL 205 (355)
T ss_dssp ----EEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSSE
T ss_pred ----eEEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCCC
Confidence 78999999999999776 34689999999999999999999986 899999999999999999999999999
Q ss_pred ccccCcccCCcccccccccccccccchh-----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHh--hC
Q 041479 670 TRFIPEVMSSNQCSSVGLKGTVGYATPE-----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKM--AL 730 (771)
Q Consensus 670 a~~~~~~~~~~~~~~~~~~gt~~y~aPE-----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~--~~ 730 (771)
++....... ......+||+.|+||| +||++|||++|+.||....... ...++... ..
T Consensus 206 a~~~~~~~~---~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~-~~~~~~~~~~~~ 281 (355)
T 1vzo_A 206 SKEFVADET---ERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKN-SQAEISRRILKS 281 (355)
T ss_dssp EEECCGGGG---GGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCC-CHHHHHHHHHHC
T ss_pred CeecccCCC---CcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccc-hHHHHHHHHhcc
Confidence 986543221 1223457999999999 6999999999999996432221 22222222 11
Q ss_pred CCchhhhcCccccccCcccChhchhhcC-----CHHHHHHH
Q 041479 731 PDQILQVLDPLFLVGGVQEGEETAEENI-----KKGQIRES 766 (771)
Q Consensus 731 ~~~~~~~~~~~~~~~~~~cl~~~p~~Rp-----t~~~vl~~ 766 (771)
....+..+++.+.....+||+.||++|| |+.|+++.
T Consensus 282 ~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h 322 (355)
T 1vzo_A 282 EPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEH 322 (355)
T ss_dssp CCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTS
T ss_pred CCCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcC
Confidence 2233344555555667799999999999 99998753
No 247
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=99.98 E-value=7.4e-33 Score=295.97 Aligned_cols=227 Identities=23% Similarity=0.290 Sum_probs=168.6
Q ss_pred ccccccccccceEEEEEecCCCeEEEEEEeeccch-hhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEE
Q 041479 525 LNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQR-GALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYE 603 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e 603 (771)
....+|+|.+|+||+|++..+++.||||++..... .....+.+|++++++++||||+++++++.+.+ ..++|||
T Consensus 6 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~~~lv~e 80 (324)
T 3mtl_A 6 KLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEK-----SLTLVFE 80 (324)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSS-----CEEEEEE
T ss_pred EEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCC-----EEEEEec
Confidence 34568999999999999998889999999965432 22235668999999999999999999998776 6899999
Q ss_pred eccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCC
Q 041479 604 FMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSS 679 (771)
Q Consensus 604 ~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 679 (771)
|++ |+|.++ ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.......
T Consensus 81 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~- 155 (324)
T 3mtl_A 81 YLD-KDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK- 155 (324)
T ss_dssp CCS-EEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSSEEECC------
T ss_pred ccc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCcccccccCCcc-
Confidence 997 477554 34588999999999999999999986 999999999999999999999999999985543221
Q ss_pred cccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhC-C--Cch------
Q 041479 680 NQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMAL-P--DQI------ 734 (771)
Q Consensus 680 ~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~-~--~~~------ 734 (771)
......||+.|+||| +||++|||++|+.||.+..... .+..+..... + ...
T Consensus 156 ---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~ 231 (324)
T 3mtl_A 156 ---TYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE-QLHFIFRILGTPTEETWPGILSN 231 (324)
T ss_dssp ----------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCTTTSTTGGGC
T ss_pred ---ccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCChHhchhhhcc
Confidence 122346899999999 6999999999999997532211 1111111110 0 000
Q ss_pred -------------------hhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 735 -------------------LQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 735 -------------------~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
...+++.+.....+||+.||++|||+.|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 232 EEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp HHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 1123344445566999999999999999975
No 248
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=99.97 E-value=3.6e-32 Score=316.52 Aligned_cols=232 Identities=20% Similarity=0.271 Sum_probs=183.1
Q ss_pred cccccccccceEEEEEecCC---CeEEEEEEeecc-chhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEE
Q 041479 526 NVSYESLVKATVYKGILDLD---QTFIAVKVLFLH-QRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALV 601 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~---~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv 601 (771)
...+|+|.+|+||+|++..+ +..||||++... .....+.|.+|+.++++++|||||++++++.+. ..|+|
T Consensus 395 ~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~------~~~lv 468 (656)
T 2j0j_A 395 GRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITEN------PVWII 468 (656)
T ss_dssp EEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS------SCEEE
T ss_pred eeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC------ceEEE
Confidence 44589999999999998643 467999998654 334557899999999999999999999998543 36899
Q ss_pred EEeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCccc
Q 041479 602 YEFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVM 677 (771)
Q Consensus 602 ~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~ 677 (771)
|||+++|+|.++ ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+|||+++......
T Consensus 469 ~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~ 545 (656)
T 2j0j_A 469 MELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 545 (656)
T ss_dssp EECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC--
T ss_pred EEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecCCCeecCCCc
Confidence 999999999876 23588999999999999999999996 99999999999999999999999999998764432
Q ss_pred CCcccccccccccccccchh---------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCCchhhhcCcc
Q 041479 678 SSNQCSSVGLKGTVGYATPE---------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPL 741 (771)
Q Consensus 678 ~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 741 (771)
. .......||+.||||| +||++|||++ |..||.+... ...........+...+..+++.
T Consensus 546 ~---~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~--~~~~~~i~~~~~~~~~~~~~~~ 620 (656)
T 2j0j_A 546 Y---YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKN--NDVIGRIENGERLPMPPNCPPT 620 (656)
T ss_dssp -----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCH--HHHHHHHHHTCCCCCCTTCCHH
T ss_pred c---eeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCH--HHHHHHHHcCCCCCCCccccHH
Confidence 1 1122345788999999 6999999997 9999976422 1233333333333344556667
Q ss_pred ccccCcccChhchhhcCCHHHHHHHHHHhC
Q 041479 742 FLVGGVQEGEETAEENIKKGQIRESLIAIL 771 (771)
Q Consensus 742 ~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~l 771 (771)
+...+.+||+.||++|||+.++++.|++++
T Consensus 621 l~~li~~~l~~dP~~RPs~~el~~~L~~il 650 (656)
T 2j0j_A 621 LYSLMTKCWAYDPSRRPRFTELKAQLSTIL 650 (656)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 777778999999999999999999999863
No 249
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=99.97 E-value=7.1e-32 Score=284.68 Aligned_cols=230 Identities=21% Similarity=0.233 Sum_probs=183.8
Q ss_pred cccccccccccccceEEEEEecCCCeEEEEEEeeccc---------hhhHHHHHHHHHHHhccC-CCCceeEEEEeecCC
Q 041479 522 DLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ---------RGALKSFMAECQALRNIR-HRNLVKIITACSTSD 591 (771)
Q Consensus 522 ~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---------~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~ 591 (771)
.+.....+|+|.+|+||+|+++.+++.||||++.... ....+.+.+|++++++++ ||||+++++++...+
T Consensus 18 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~ 97 (298)
T 1phk_A 18 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNT 97 (298)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSS
T ss_pred ccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCC
Confidence 3444566899999999999999999999999996542 233567899999999996 999999999998766
Q ss_pred CCCceeEEEEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEeccc
Q 041479 592 FQGNYFRALVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFG 668 (771)
Q Consensus 592 ~~~~~~~~lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfG 668 (771)
..++||||+++|+|.++ ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||
T Consensus 98 -----~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg 169 (298)
T 1phk_A 98 -----FFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDFG 169 (298)
T ss_dssp -----EEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCT
T ss_pred -----eEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEeccc
Confidence 78999999999999876 34689999999999999999999986 99999999999999999999999999
Q ss_pred CccccCcccCCcccccccccccccccchh---------------------HHHHHHHHHhCCCCCCccccCCccHHHHHH
Q 041479 669 LTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVK 727 (771)
Q Consensus 669 la~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~ 727 (771)
+++....... .....||+.|+||| +|+++|||++|+.||.+.... ........
T Consensus 170 ~~~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-~~~~~~~~ 243 (298)
T 1phk_A 170 FSCQLDPGEK-----LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQM-LMLRMIMS 243 (298)
T ss_dssp TCEECCTTCC-----BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHH
T ss_pred chhhcCCCcc-----cccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHH-HHHHHHhc
Confidence 9986543221 22346899999999 599999999999999653211 11222222
Q ss_pred hhCC--CchhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 728 MALP--DQILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 728 ~~~~--~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
.... ......+++.+.....+||+.||++|||+.|+++
T Consensus 244 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 244 GNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp TCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred CCcccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 2222 2222345556666777999999999999999975
No 250
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=99.97 E-value=4.5e-32 Score=293.56 Aligned_cols=238 Identities=21% Similarity=0.246 Sum_probs=179.6
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccc-hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALV 601 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv 601 (771)
+.....+|+|.+|+||+|++..+++.||||++.... .....++.+|++++++++||||+++++++....+......|+|
T Consensus 13 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv 92 (353)
T 2b9h_A 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYII 92 (353)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEEE
T ss_pred eEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEEEE
Confidence 344566899999999999999999999999996433 3455788999999999999999999999876654444478999
Q ss_pred EEeccCCCCCCC--cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCC
Q 041479 602 YEFMHHGSLESC--PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSS 679 (771)
Q Consensus 602 ~e~~~~g~L~~~--~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 679 (771)
|||++ |+|.++ ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++........
T Consensus 93 ~e~~~-~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~ 168 (353)
T 2b9h_A 93 QELMQ-TDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAAD 168 (353)
T ss_dssp ECCCS-EEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCTTCEECC-----
T ss_pred EeccC-ccHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEeccccccccccccc
Confidence 99997 577665 34689999999999999999999986 9999999999999999999999999999876532211
Q ss_pred c------ccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHh---------
Q 041479 680 N------QCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKM--------- 728 (771)
Q Consensus 680 ~------~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~--------- 728 (771)
. .......+||+.|+||| +||++|||++|+.||.+..... .+..+...
T Consensus 169 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~ 247 (353)
T 2b9h_A 169 NSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRH-QLLLIFGIIGTPHSDND 247 (353)
T ss_dssp -----------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCSTTT
T ss_pred ccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHHHhCCCchhcc
Confidence 1 11123457899999999 6999999999999996532110 01111100
Q ss_pred --------------hCC----C---chhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 729 --------------ALP----D---QILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 729 --------------~~~----~---~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
..+ . .....+++.+.....+||+.||++|||+.|+++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (353)
T 2b9h_A 248 LRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALE 305 (353)
T ss_dssp TTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred ccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 000 0 011233444555666999999999999999985
No 251
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.97 E-value=5e-32 Score=316.31 Aligned_cols=229 Identities=19% Similarity=0.185 Sum_probs=184.2
Q ss_pred ccccccccccccccceEEEEEecCCCeEEEEEEeecc---chhhHHHHHHHHHHHhcc-CCCCceeEEEEeecCCCCCce
Q 041479 521 KDLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLH---QRGALKSFMAECQALRNI-RHRNLVKIITACSTSDFQGNY 596 (771)
Q Consensus 521 ~~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~ 596 (771)
.++.....+|+|.+|+||+|+++.+++.||||++... .....+.+..|..++..+ +||+|+++++++.+.+
T Consensus 341 ~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~----- 415 (674)
T 3pfq_A 341 TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMD----- 415 (674)
T ss_dssp TTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSS-----
T ss_pred cceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCC-----
Confidence 3445556799999999999999999999999999754 234557889999999988 6999999999987766
Q ss_pred eEEEEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCcccc
Q 041479 597 FRALVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673 (771)
Q Consensus 597 ~~~lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~ 673 (771)
..|+||||+++|+|.++ ...+++.++..|+.|++.||+|||+. +|+||||||+|||++.++.+||+|||+|+..
T Consensus 416 ~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFGla~~~ 492 (674)
T 3pfq_A 416 RLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFGMCKEN 492 (674)
T ss_dssp EEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCTTCEEC
T ss_pred EEEEEEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecceeecc
Confidence 78999999999999776 35689999999999999999999996 9999999999999999999999999999853
Q ss_pred CcccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhc
Q 041479 674 PEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVL 738 (771)
Q Consensus 674 ~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~ 738 (771)
.... ......+||+.||||| +||++|||++|+.||.+... ...+..+.... ...+..+
T Consensus 493 ~~~~----~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~-~~~~~~i~~~~--~~~p~~~ 565 (674)
T 3pfq_A 493 IWDG----VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE-DELFQSIMEHN--VAYPKSM 565 (674)
T ss_dssp CCTT----CCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSH-HHHHHHHHSSC--CCCCTTS
T ss_pred ccCC----cccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCH-HHHHHHHHhCC--CCCCccC
Confidence 3222 1233467999999999 69999999999999975321 11122222222 2234456
Q ss_pred CccccccCcccChhchhhcCCH-----HHHH
Q 041479 739 DPLFLVGGVQEGEETAEENIKK-----GQIR 764 (771)
Q Consensus 739 ~~~~~~~~~~cl~~~p~~Rpt~-----~~vl 764 (771)
++.+..+..+||++||++||++ .||+
T Consensus 566 s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~ 596 (674)
T 3pfq_A 566 SKEAVAICKGLMTKHPGKRLGCGPEGERDIK 596 (674)
T ss_dssp CHHHHHHHHHHSCSSSTTCTTCSTTHHHHHH
T ss_pred CHHHHHHHHHHccCCHHHCCCCCCCcHHHHh
Confidence 6666677779999999999997 6665
No 252
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.97 E-value=5.5e-32 Score=292.89 Aligned_cols=285 Identities=15% Similarity=0.197 Sum_probs=217.4
Q ss_pred CCCCCCCCCccceeeeecCCCCcEEEEEcCCCCCcccCCccccCCCCCcEEEcCCCcccccCCccccCCCCCCEEecccC
Q 041479 23 STWNDSVNFCQWLGVTCSLKYQRVILLNLSGQNLTGTASPYIGNLTFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSN 102 (771)
Q Consensus 23 ~~w~~~~~~c~w~~v~c~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 102 (771)
..|.....+|.|.|+ |+ +++|+++ .+|..+. ++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 21 ~~~~~~~~~C~~~~~-c~----------~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n 86 (353)
T 2z80_A 21 ESSNQASLSCDRNGI-CK----------GSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSN 86 (353)
T ss_dssp ------CCEECTTSE-EE----------CCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTS
T ss_pred cCCCccCCCCCCCeE-ee----------CCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCC
Confidence 456556678999988 74 4678888 4555444 58999999999999877778999999999999999
Q ss_pred cCcccCCcccccCCcccccCCccccCCCCCCEEecccccCcCCCCccceeeecccccccccCc-cccCCCCCCEEecccC
Q 041479 103 ALQGQIPDSRLILNKLEGNIPSELGSLLKFKGLGLANNYFTGPIPHLNMFQVSVYSLTGSIPI-QLLNITSMEYFHVSEN 181 (771)
Q Consensus 103 ~l~~~~p~~~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~L~~l~l~~n~l~~~~p~-~~~~l~~L~~L~Ls~N 181 (771)
+++ +..|..|.++++|++|+|++|+++ .+|. .|.++++|++|++++|
T Consensus 87 ~l~--------------~~~~~~~~~l~~L~~L~Ls~n~l~------------------~~~~~~~~~l~~L~~L~L~~n 134 (353)
T 2z80_A 87 GIN--------------TIEEDSFSSLGSLEHLDLSYNYLS------------------NLSSSWFKPLSSLTFLNLLGN 134 (353)
T ss_dssp CCC--------------EECTTTTTTCTTCCEEECCSSCCS------------------SCCHHHHTTCTTCSEEECTTC
T ss_pred ccC--------------ccCHhhcCCCCCCCEEECCCCcCC------------------cCCHhHhCCCccCCEEECCCC
Confidence 965 455677899999999999999887 3443 3788999999999999
Q ss_pred cCcccCCh-hhhhCCCCCcEEEeecC-cccccCCccccCCCCCCEEEccccccCCCCCcCcccccCCCCCcEEEccCccc
Q 041479 182 QLVGELPP-HIGFTLPNVRILLLAGN-QFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSL 259 (771)
Q Consensus 182 ~l~g~lp~-~~~~~l~~L~~L~L~~N-~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l 259 (771)
+++ .+|. ..+..+++|++|++++| .+.+..+..|.++++|++|++++|++++..|..| ..+++|++|++++|++
T Consensus 135 ~l~-~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l---~~l~~L~~L~l~~n~l 210 (353)
T 2z80_A 135 PYK-TLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSL---KSIQNVSHLILHMKQH 210 (353)
T ss_dssp CCS-SSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTT---TTCSEEEEEEEECSCS
T ss_pred CCc-ccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHH---hccccCCeecCCCCcc
Confidence 998 7887 55558999999999999 5887778899999999999999999998888776 7789999999999999
Q ss_pred cccCChhhhhcccccceeecccCcCcccCccccc---ccCCcceEecCCcccee----ccCccccCCCCCCEEEccCCcc
Q 041479 260 SGTLPNSLANFSSHLRYLYMSANPISGSIPTEIG---NLKNLIIIAIEKFILIR----NIPISVGYLLKLQVLSLFENNI 332 (771)
Q Consensus 260 ~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~---~l~~L~~L~l~~n~l~~----~~p~~~~~l~~L~~L~Ls~N~l 332 (771)
+ .+|..+....++|++|++++|++++..+..+. ....++.+++.++.+.+ .+|..+..+++|+.|++++|++
T Consensus 211 ~-~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l 289 (353)
T 2z80_A 211 I-LLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQL 289 (353)
T ss_dssp T-THHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCC
T ss_pred c-cchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCC
Confidence 7 66666554345899999999999976655443 34556666776666644 3566666777777777777777
Q ss_pred cccCCcccccccccccccccCcccee
Q 041479 333 SREIPSSLGNFTFLTELNLCGNSIRG 358 (771)
Q Consensus 333 ~~~~p~~~~~l~~L~~L~Ls~N~l~~ 358 (771)
+...+..|..+++|++|+|++|++.+
T Consensus 290 ~~i~~~~~~~l~~L~~L~L~~N~~~~ 315 (353)
T 2z80_A 290 KSVPDGIFDRLTSLQKIWLHTNPWDC 315 (353)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CccCHHHHhcCCCCCEEEeeCCCccC
Confidence 63333334677777777777777664
No 253
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=99.97 E-value=1e-31 Score=284.50 Aligned_cols=231 Identities=21% Similarity=0.226 Sum_probs=178.9
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccc----hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ----RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFR 598 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~----~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 598 (771)
+.....+|+|.+|+||+|.+..+++.||||++.... ....+.+.+|++++++++||||+++++++...+. ...
T Consensus 7 y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~---~~~ 83 (305)
T 2wtk_C 7 YLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEK---QKM 83 (305)
T ss_dssp BCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC------CE
T ss_pred eeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCC---CeE
Confidence 334556899999999999999999999999996543 2346789999999999999999999999854331 167
Q ss_pred EEEEEeccCCCCCCC-----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCcccc
Q 041479 599 ALVYEFMHHGSLESC-----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673 (771)
Q Consensus 599 ~lv~e~~~~g~L~~~-----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~ 673 (771)
|+||||+++| +.+. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~ 159 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEAL 159 (305)
T ss_dssp EEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCTTCEEC
T ss_pred EEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeecccccccc
Confidence 9999999877 3322 34688999999999999999999996 9999999999999999999999999999865
Q ss_pred CcccCCcccccccccccccccchh-----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhh
Q 041479 674 PEVMSSNQCSSVGLKGTVGYATPE-----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQ 736 (771)
Q Consensus 674 ~~~~~~~~~~~~~~~gt~~y~aPE-----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~ 736 (771)
...... .......||+.|+||| +|+++|||++|+.||.+... ....+..... ....+.
T Consensus 160 ~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~~~i~~~-~~~~~~ 234 (305)
T 2wtk_C 160 HPFAAD--DTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNI--YKLFENIGKG-SYAIPG 234 (305)
T ss_dssp CTTCSS--CEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSH--HHHHHHHHHC-CCCCCS
T ss_pred Cccccc--cccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchH--HHHHHHHhcC-CCCCCC
Confidence 432221 1122346899999999 69999999999999975311 1122222111 122233
Q ss_pred hcCccccccCcccChhchhhcCCHHHHHH
Q 041479 737 VLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 737 ~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
.+++.+.....+||..||++|||+.|+++
T Consensus 235 ~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 263 (305)
T 2wtk_C 235 DCGPPLSDLLKGMLEYEPAKRFSIRQIRQ 263 (305)
T ss_dssp SSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred ccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 44555656677999999999999999986
No 254
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=2.5e-32 Score=296.82 Aligned_cols=230 Identities=24% Similarity=0.254 Sum_probs=171.2
Q ss_pred cccccccccccceEEEEEecCCCeEEEEEEeecc--chhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCC-CceeEEE
Q 041479 524 LLNVSYESLVKATVYKGILDLDQTFIAVKVLFLH--QRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQ-GNYFRAL 600 (771)
Q Consensus 524 ~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~-~~~~~~l 600 (771)
.....+|+|.+|+||+|++..+++.||||++... .....+++.+|+++++.++||||+++++++...... .....|+
T Consensus 28 ~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~l 107 (367)
T 1cm8_A 28 RDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYL 107 (367)
T ss_dssp EEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEE
T ss_pred EEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceEEE
Confidence 3445689999999999999999999999999543 234567899999999999999999999998765321 1124699
Q ss_pred EEEeccCCCCCCC--cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccC
Q 041479 601 VYEFMHHGSLESC--PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMS 678 (771)
Q Consensus 601 v~e~~~~g~L~~~--~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 678 (771)
||||+ +++|.++ ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 108 v~e~~-~~~L~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~-- 181 (367)
T 1cm8_A 108 VMPFM-GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFGLARQADSE-- 181 (367)
T ss_dssp EEECC-SEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCTTCEECCSS--
T ss_pred EEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeeecccccccc--
Confidence 99999 7888766 34688999999999999999999996 9999999999999999999999999999865432
Q ss_pred Ccccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhh-------------
Q 041479 679 SNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMA------------- 729 (771)
Q Consensus 679 ~~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~------------- 729 (771)
....+||+.|+||| +||++|||++|+.||.+..... .+..+....
T Consensus 182 -----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~l~~i~~~~g~~~~~~~~~~~~ 255 (367)
T 1cm8_A 182 -----MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLD-QLKEIMKVTGTPPAEFVQRLQS 255 (367)
T ss_dssp -----CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCHHHHHTCSC
T ss_pred -----cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcCCCCHHHHHHhhh
Confidence 22356899999999 6999999999999996532111 111111110
Q ss_pred ---------CC----Cc---hhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 730 ---------LP----DQ---ILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 730 ---------~~----~~---~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
.+ .. .....++.+.....+|++.||++|||+.|+++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e~l~ 307 (367)
T 1cm8_A 256 DEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALA 307 (367)
T ss_dssp HHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHHHhc
Confidence 11 00 11122333444556999999999999999986
No 255
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=99.97 E-value=6.9e-33 Score=293.02 Aligned_cols=234 Identities=23% Similarity=0.270 Sum_probs=160.9
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccc-hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ-RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALV 601 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv 601 (771)
+.....+|+|.+|+||+|++..+++.||||++.... ....+++.+|++++++++||||+++++++...+ ..++|
T Consensus 17 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~lv 91 (303)
T 2vwi_A 17 YELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKD-----ELWLV 91 (303)
T ss_dssp CEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSS-----CEEEE
T ss_pred hhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecC-----CcEEE
Confidence 444567899999999999998888899999986543 334578899999999999999999999998776 67999
Q ss_pred EEeccCCCCCCCc-----------ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCc
Q 041479 602 YEFMHHGSLESCP-----------RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLT 670 (771)
Q Consensus 602 ~e~~~~g~L~~~~-----------~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla 670 (771)
|||+++|+|.++. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++
T Consensus 92 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg~~ 168 (303)
T 2vwi_A 92 MKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFGVS 168 (303)
T ss_dssp EECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCHHH
T ss_pred ehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEeccch
Confidence 9999999997652 3488999999999999999999986 9999999999999999999999999999
Q ss_pred cccCcccCC-cccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCC-
Q 041479 671 RFIPEVMSS-NQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPD- 732 (771)
Q Consensus 671 ~~~~~~~~~-~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~- 732 (771)
+........ .........||+.|+||| +|+++|||++|+.||.+..... ..........+.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~ 247 (303)
T 2vwi_A 169 AFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMK-VLMLTLQNDPPSL 247 (303)
T ss_dssp HHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGG-HHHHHHTSSCCCT
T ss_pred heeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhh-HHHHHhccCCCcc
Confidence 765432211 111123456899999999 6999999999999997642221 122222211111
Q ss_pred -------chhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 733 -------QILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 733 -------~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
.....+++.+.....+||+.||++|||+.++++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 248 ETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp TC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred ccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 111223334445566999999999999999985
No 256
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=99.97 E-value=2.1e-32 Score=295.35 Aligned_cols=229 Identities=24% Similarity=0.235 Sum_probs=173.4
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccch-----hhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCcee
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQR-----GALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYF 597 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~-----~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~ 597 (771)
+.....+|+|.+|+||+|++..+++.||||++..... ...+.+.+|++++++++||||+++++++.+.+ .
T Consensus 12 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-----~ 86 (346)
T 1ua2_A 12 YEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKS-----N 86 (346)
T ss_dssp -CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTT-----C
T ss_pred cEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCC-----c
Confidence 3344568999999999999998888999999965321 12347889999999999999999999987765 6
Q ss_pred EEEEEEeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCcccc
Q 041479 598 RALVYEFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFI 673 (771)
Q Consensus 598 ~~lv~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~ 673 (771)
.++||||+++ +|.+. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++..
T Consensus 87 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~ 162 (346)
T 1ua2_A 87 ISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFGLAKSF 162 (346)
T ss_dssp CEEEEECCSE-EHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCGGGSTT
T ss_pred eEEEEEcCCC-CHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEecccceec
Confidence 7999999986 66444 33588899999999999999999996 8999999999999999999999999999866
Q ss_pred CcccCCcccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhh-CC--Cch
Q 041479 674 PEVMSSNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMA-LP--DQI 734 (771)
Q Consensus 674 ~~~~~~~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~-~~--~~~ 734 (771)
..... .....+||+.|+||| +||++|||++|..||.+.... ..+..+.... .+ ...
T Consensus 163 ~~~~~----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~-~~~~~i~~~~~~~~~~~~ 237 (346)
T 1ua2_A 163 GSPNR----AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDL-DQLTRIFETLGTPTEEQW 237 (346)
T ss_dssp TSCCC----CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCTTTS
T ss_pred cCCcc----cCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHH-HHHHHHHHHcCCCChhhh
Confidence 43221 122356899999999 699999999999998653211 1122222211 11 000
Q ss_pred -----------------------hhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 735 -----------------------LQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 735 -----------------------~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
...+++.+.....+||+.||++|||+.|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 291 (346)
T 1ua2_A 238 PDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK 291 (346)
T ss_dssp SSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred hhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhc
Confidence 0222334445566999999999999999985
No 257
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=99.97 E-value=7.7e-32 Score=292.57 Aligned_cols=175 Identities=26% Similarity=0.311 Sum_probs=150.1
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccC-----CCCceeEEEEeecCCCCCcee
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIR-----HRNLVKIITACSTSDFQGNYF 597 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-----H~nIv~l~~~~~~~~~~~~~~ 597 (771)
+.....+|+|.+|+||+|++..+++.||||++... ....+.+..|++++++++ |||||++++++...+ .
T Consensus 37 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~-----~ 110 (360)
T 3llt_A 37 FLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYD-----H 110 (360)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETT-----E
T ss_pred EEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECC-----e
Confidence 33455689999999999999989999999999643 334567888999999996 999999999998876 7
Q ss_pred EEEEEEeccCCCCCCC-----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCC--------------
Q 041479 598 RALVYEFMHHGSLESC-----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN-------------- 658 (771)
Q Consensus 598 ~~lv~e~~~~g~L~~~-----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~-------------- 658 (771)
.++||||+ +++|.++ ...+++.++..++.|++.||+|||+. +|+||||||+|||++.
T Consensus 111 ~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~~~~~~~~ 186 (360)
T 3llt_A 111 MCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPYFEKSLITVRRVT 186 (360)
T ss_dssp EEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTTCCEEEEEEECTT
T ss_pred eEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEccccccccccchhccc
Confidence 89999999 8899766 23488999999999999999999986 9999999999999975
Q ss_pred -----------CCceEEecccCccccCcccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCC
Q 041479 659 -----------DMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPT 712 (771)
Q Consensus 659 -----------~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~ 712 (771)
++.+||+|||+|+...... ....||+.|+||| +||++|||++|+.||
T Consensus 187 ~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~-------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf 259 (360)
T 3llt_A 187 DGKKIQIYRTKSTGIKLIDFGCATFKSDYH-------GSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLF 259 (360)
T ss_dssp TCCEEEEEEESCCCEEECCCTTCEETTSCC-------CSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSC
T ss_pred ccccccccccCCCCEEEEeccCceecCCCC-------cCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCC
Confidence 7889999999998543321 2346899999999 699999999999999
Q ss_pred Cc
Q 041479 713 SD 714 (771)
Q Consensus 713 ~~ 714 (771)
..
T Consensus 260 ~~ 261 (360)
T 3llt_A 260 RT 261 (360)
T ss_dssp CC
T ss_pred CC
Confidence 65
No 258
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=99.97 E-value=1.1e-31 Score=286.12 Aligned_cols=235 Identities=20% Similarity=0.243 Sum_probs=173.5
Q ss_pred cccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCC---------CC
Q 041479 524 LLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF---------QG 594 (771)
Q Consensus 524 ~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~---------~~ 594 (771)
.....+|+|.+|+||+|++..+++.||||++........+++.+|++++++++||||+++++++..... ..
T Consensus 14 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~ 93 (320)
T 2i6l_A 14 MDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTE 93 (320)
T ss_dssp EEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----CCS
T ss_pred eEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccccccc
Confidence 344568999999999999999899999999987766677899999999999999999999999854321 12
Q ss_pred ceeEEEEEEeccCCCCCCC--cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeC-CCCceEEecccCcc
Q 041479 595 NYFRALVYEFMHHGSLESC--PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD-NDMTAHMGDFGLTR 671 (771)
Q Consensus 595 ~~~~~lv~e~~~~g~L~~~--~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~-~~~~~kl~DfGla~ 671 (771)
....|+||||++ |+|.++ ...+++..+..++.|++.||+|||+. +|+||||||+||+++ .++.+||+|||+++
T Consensus 94 ~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl~Dfg~~~ 169 (320)
T 2i6l_A 94 LNSVYIVQEYME-TDLANVLEQGPLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLVLKIGDFGLAR 169 (320)
T ss_dssp CSEEEEEEECCS-EEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTTEEEECCCTTCB
T ss_pred cCceeEEeeccC-CCHHHHhhcCCccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCeEEEccCcccc
Confidence 236799999997 588765 34688999999999999999999996 999999999999997 56799999999998
Q ss_pred ccCcccCCcccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCC----
Q 041479 672 FIPEVMSSNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALP---- 731 (771)
Q Consensus 672 ~~~~~~~~~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~---- 731 (771)
........ ........||+.|+||| +||++|||++|+.||.+..... ....... ..+
T Consensus 170 ~~~~~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~~~~~~~-~~~~~~~ 246 (320)
T 2i6l_A 170 IMDPHYSH-KGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELE-QMQLILE-SIPVVHE 246 (320)
T ss_dssp CC---------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHH-HSCCCCH
T ss_pred ccCCCccc-ccccccccccccccCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHH-HHHHHHH-hcCCCch
Confidence 76432211 11223345799999999 6999999999999997532111 1111111 111
Q ss_pred -------------------------CchhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 732 -------------------------DQILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 732 -------------------------~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
......+++.+.....+||+.||++|||+.|+++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 305 (320)
T 2i6l_A 247 EDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEALS 305 (320)
T ss_dssp HHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGGSCCHHHHHT
T ss_pred hhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccccCCHHHHhC
Confidence 0011234455556667999999999999999985
No 259
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=99.97 E-value=6.6e-32 Score=294.19 Aligned_cols=183 Identities=21% Similarity=0.227 Sum_probs=144.1
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeecc--chhhHHHHHHHHHHHhccCCCCceeEEEEeecCCC-CCceeEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLH--QRGALKSFMAECQALRNIRHRNLVKIITACSTSDF-QGNYFRA 599 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~-~~~~~~~ 599 (771)
+.....+|+|.+|+||+|++..+++.||||++... .....+.+.+|+.+++.++||||+++++++...+. ......|
T Consensus 27 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~ 106 (371)
T 2xrw_A 27 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVY 106 (371)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEEE
T ss_pred eeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccceE
Confidence 34455689999999999999999999999999653 23455788999999999999999999999876531 1223679
Q ss_pred EEEEeccCCCCCCC-cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccC
Q 041479 600 LVYEFMHHGSLESC-PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMS 678 (771)
Q Consensus 600 lv~e~~~~g~L~~~-~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 678 (771)
+||||+++ +|.+. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++......
T Consensus 107 lv~e~~~~-~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~- 181 (371)
T 2xrw_A 107 IVMELMDA-NLCQVIQMELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF- 181 (371)
T ss_dssp EEEECCSE-EHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCC---------
T ss_pred EEEEcCCC-CHHHHHhhccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEeeccccccccc-
Confidence 99999975 55443 45688999999999999999999996 99999999999999999999999999998654321
Q ss_pred Ccccccccccccccccchh---------------HHHHHHHHHhCCCCCCc
Q 041479 679 SNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSD 714 (771)
Q Consensus 679 ~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~ 714 (771)
.....+||+.|+||| +||++|||++|+.||.+
T Consensus 182 ----~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~ 228 (371)
T 2xrw_A 182 ----MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPG 228 (371)
T ss_dssp ------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ----ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 122356899999999 69999999999999965
No 260
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=99.97 E-value=7.6e-32 Score=301.90 Aligned_cols=237 Identities=17% Similarity=0.226 Sum_probs=183.7
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCC-CCceeEEEEeecCCCCCceeEEEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRH-RNLVKIITACSTSDFQGNYFRALV 601 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H-~nIv~l~~~~~~~~~~~~~~~~lv 601 (771)
+.....+|+|.+|+||+|++..+++.||||++..... .+++.+|+++++.++| ++|..+..++.+.+ ..++|
T Consensus 9 y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~-----~~~lv 81 (483)
T 3sv0_A 9 FRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGD-----YNVLV 81 (483)
T ss_dssp EECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETT-----EEEEE
T ss_pred EEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCC-----EEEEE
Confidence 3445568999999999999998889999998865432 2468899999999987 55555555555554 67999
Q ss_pred EEeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeee---CCCCceEEecccCccccC
Q 041479 602 YEFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLL---DNDMTAHMGDFGLTRFIP 674 (771)
Q Consensus 602 ~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl---~~~~~~kl~DfGla~~~~ 674 (771)
|||+ +++|.++ ...+++.++..|+.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||+++...
T Consensus 82 me~~-g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~ 157 (483)
T 3sv0_A 82 MDLL-GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYR 157 (483)
T ss_dssp EECC-CCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCTTCEECB
T ss_pred EECC-CCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCCcceecc
Confidence 9999 8999776 45689999999999999999999996 99999999999999 578999999999998765
Q ss_pred cccCCc---ccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCc--cHHHHHHhhCC---
Q 041479 675 EVMSSN---QCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGL--DLHNFVKMALP--- 731 (771)
Q Consensus 675 ~~~~~~---~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~--~~~~~~~~~~~--- 731 (771)
...... ........||+.|+||| |||++|||++|+.||.+...... .+..+......
T Consensus 158 ~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~ 237 (483)
T 3sv0_A 158 DTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSI 237 (483)
T ss_dssp CTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCH
T ss_pred CCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccH
Confidence 433211 11223567999999999 79999999999999986533221 12222222222
Q ss_pred CchhhhcCccccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 732 DQILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 732 ~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
......+.+.+..++..||+.||++||++.+|++.|+++
T Consensus 238 ~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l 276 (483)
T 3sv0_A 238 EALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDL 276 (483)
T ss_dssp HHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred HHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence 223344556666777799999999999999999999886
No 261
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=99.97 E-value=4.6e-32 Score=296.82 Aligned_cols=229 Identities=19% Similarity=0.183 Sum_probs=171.2
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCC----------
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF---------- 592 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~---------- 592 (771)
+.....+|+|.+|+||+|++..+++.||||++..... ...+|+++++.++|||||++++++.....
T Consensus 9 y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~ 84 (383)
T 3eb0_A 9 YSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPD 84 (383)
T ss_dssp EEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC------------
T ss_pred EEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCccccccccccc
Confidence 3445568999999999999999999999999864432 23479999999999999999999865431
Q ss_pred -----------------------CCceeEEEEEEeccCCCCCCC-------cccCCHHHHHHHHHHHHHHHHHHHhcCCC
Q 041479 593 -----------------------QGNYFRALVYEFMHHGSLESC-------PRILSFLRRLNIAIDVASALEYLHHHCKK 642 (771)
Q Consensus 593 -----------------------~~~~~~~lv~e~~~~g~L~~~-------~~~l~~~~~~~i~~~ia~gL~~LH~~~~~ 642 (771)
.+..+.++||||+++ +|.+. ...+++..+..++.|++.||+|||+.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~--- 160 (383)
T 3eb0_A 85 DHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSL--- 160 (383)
T ss_dssp -------------------------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---
T ss_pred ccccccccccccccccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---
Confidence 222357899999984 65433 35689999999999999999999985
Q ss_pred CeEecCCCCCCeeeC-CCCceEEecccCccccCcccCCcccccccccccccccchh----------------HHHHHHHH
Q 041479 643 PIVHCDLKPSNVLLD-NDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE----------------YGILLLEI 705 (771)
Q Consensus 643 ~ivHrdlk~~NILl~-~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE----------------~Gv~l~el 705 (771)
+|+||||||+||+++ .++.+||+|||+|+....... .....||+.|+||| +||++|||
T Consensus 161 gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el 235 (383)
T 3eb0_A 161 GICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP-----SVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGEL 235 (383)
T ss_dssp TEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSC-----CCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHH
T ss_pred cCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCC-----CcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHH
Confidence 999999999999997 688999999999986544322 22346899999999 69999999
Q ss_pred HhCCCCCCccccCCccHHHHHHhhC-C----------------------Cc----hhhhcCccccccCcccChhchhhcC
Q 041479 706 FTGKRPTSDMFTEGLDLHNFVKMAL-P----------------------DQ----ILQVLDPLFLVGGVQEGEETAEENI 758 (771)
Q Consensus 706 ~tg~~P~~~~~~~~~~~~~~~~~~~-~----------------------~~----~~~~~~~~~~~~~~~cl~~~p~~Rp 758 (771)
++|+.||.+..... .+.++..... | .. .+...++.+.....+||+.||++||
T Consensus 236 l~g~~pf~~~~~~~-~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~ 314 (383)
T 3eb0_A 236 ILGKPLFSGETSID-QLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRI 314 (383)
T ss_dssp HHSSCSSCCSSHHH-HHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSC
T ss_pred HhCCCCCCCCChHH-HHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCC
Confidence 99999997532211 1222222111 0 00 1112333344556699999999999
Q ss_pred CHHHHHH
Q 041479 759 KKGQIRE 765 (771)
Q Consensus 759 t~~~vl~ 765 (771)
|+.|+++
T Consensus 315 t~~e~l~ 321 (383)
T 3eb0_A 315 NPYEAMA 321 (383)
T ss_dssp CHHHHHT
T ss_pred CHHHHhc
Confidence 9999984
No 262
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=99.97 E-value=7.9e-32 Score=288.23 Aligned_cols=234 Identities=22% Similarity=0.234 Sum_probs=178.3
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhcc-CCCCceeEEEEeecCCCCC-ceeEEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNI-RHRNLVKIITACSTSDFQG-NYFRAL 600 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~-~~~~~l 600 (771)
+.....+|+|.+|+||+|++..+++.||||++.... ...+.+.+|+.+++++ +||||+++++++......+ ....|+
T Consensus 26 y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~l 104 (326)
T 2x7f_A 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWL 104 (326)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEE
T ss_pred EEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEEE
Confidence 344566899999999999998888899999996543 2347889999999999 7999999999997643111 126799
Q ss_pred EEEeccCCCCCCC-----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCc
Q 041479 601 VYEFMHHGSLESC-----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPE 675 (771)
Q Consensus 601 v~e~~~~g~L~~~-----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~ 675 (771)
||||+++|+|.++ ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||++.....
T Consensus 105 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 181 (326)
T 2x7f_A 105 VMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDR 181 (326)
T ss_dssp EEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCTTTC----
T ss_pred EEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEEEeeCcCceecCc
Confidence 9999999999776 24588999999999999999999996 899999999999999999999999999986543
Q ss_pred ccCCcccccccccccccccchh--------------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchh
Q 041479 676 VMSSNQCSSVGLKGTVGYATPE--------------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQIL 735 (771)
Q Consensus 676 ~~~~~~~~~~~~~gt~~y~aPE--------------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~ 735 (771)
... ......||+.|+||| +||++|||++|+.||.+..... ..........+....
T Consensus 182 ~~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~ 256 (326)
T 2x7f_A 182 TVG----RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR-ALFLIPRNPAPRLKS 256 (326)
T ss_dssp -------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHH-HHHHHHHSCCCCCSC
T ss_pred Ccc----ccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHH-HHHHhhcCccccCCc
Confidence 221 122346899999999 5999999999999997542211 122222222232233
Q ss_pred hhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 736 QVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 736 ~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
..+++.+.....+||..||++|||+.++++
T Consensus 257 ~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 257 KKWSKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp SCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred cccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 444556666677999999999999999986
No 263
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=99.97 E-value=4.8e-32 Score=299.98 Aligned_cols=229 Identities=20% Similarity=0.215 Sum_probs=171.3
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCC-CCceeEEEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF-QGNYFRALV 601 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~-~~~~~~~lv 601 (771)
+.....+|+|.+|+||+|++..+++.||||++.... ..+.+|++++++++|||||++++++..... .+..+.++|
T Consensus 56 y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv 131 (420)
T 1j1b_A 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLV 131 (420)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEE
T ss_pred EEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEee
Confidence 344556899999999999999888899999986432 223479999999999999999999865321 233467899
Q ss_pred EEeccCCCCCCC-------cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCC-CceEEecccCcccc
Q 041479 602 YEFMHHGSLESC-------PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDND-MTAHMGDFGLTRFI 673 (771)
Q Consensus 602 ~e~~~~g~L~~~-------~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~-~~~kl~DfGla~~~ 673 (771)
|||+++ ++.+. ...+++..+..++.|+++||+|||+. +|+||||||+|||++.+ +.+||+|||+++..
T Consensus 132 ~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~ 207 (420)
T 1j1b_A 132 LDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 207 (420)
T ss_dssp EECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred hhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccchhhhhc
Confidence 999986 44322 35688999999999999999999985 99999999999999955 67899999999865
Q ss_pred CcccCCcccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhC-CC----
Q 041479 674 PEVMSSNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMAL-PD---- 732 (771)
Q Consensus 674 ~~~~~~~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~-~~---- 732 (771)
..... ....+||+.|+||| +||++|||++|+.||.+.... ..+.++....- |.
T Consensus 208 ~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~-~~l~~i~~~lg~p~~~~~ 281 (420)
T 1j1b_A 208 VRGEP-----NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGV-DQLVEIIKVLGTPTREQI 281 (420)
T ss_dssp CTTCC-----CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCSCCHHHH
T ss_pred ccCCC-----ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCCHHHH
Confidence 43221 22356899999999 699999999999999753211 11222222110 00
Q ss_pred ------------------c----hhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 733 ------------------Q----ILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 733 ------------------~----~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
. ....+++.+..+..+||+.||++|||+.|+++
T Consensus 282 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~e~l~ 336 (420)
T 1j1b_A 282 REMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACA 336 (420)
T ss_dssp HHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred HhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHHHHhC
Confidence 0 01122334445566999999999999999985
No 264
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=99.97 E-value=6.7e-32 Score=293.20 Aligned_cols=231 Identities=21% Similarity=0.225 Sum_probs=163.1
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeecc--chhhHHHHHHHHHHHhccCCCCceeEEEEeecCC-CCCceeEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLH--QRGALKSFMAECQALRNIRHRNLVKIITACSTSD-FQGNYFRA 599 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~-~~~~~~~~ 599 (771)
+.....+|+|.+|+||+|++..+++.||||++... .....+++.+|+++++.++||||+++++++.... .......|
T Consensus 31 y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~~ 110 (367)
T 2fst_X 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVY 110 (367)
T ss_dssp EEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCE
T ss_pred eEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCeEE
Confidence 33445689999999999999999999999999643 2345678899999999999999999999986542 11112569
Q ss_pred EEEEeccCCCCCCC--cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCccc
Q 041479 600 LVYEFMHHGSLESC--PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVM 677 (771)
Q Consensus 600 lv~e~~~~g~L~~~--~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~ 677 (771)
+||||+ +++|.++ ...+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 111 lv~e~~-~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~- 185 (367)
T 2fst_X 111 LVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLARHTADE- 185 (367)
T ss_dssp EEEECC-CEECC-----CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC-----------
T ss_pred EEeccc-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeecccccccccc-
Confidence 999999 6888876 34689999999999999999999986 9999999999999999999999999999865432
Q ss_pred CCcccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhh-CC---------
Q 041479 678 SSNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMA-LP--------- 731 (771)
Q Consensus 678 ~~~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~-~~--------- 731 (771)
....+||+.|+||| +||++|||++|+.||.+..... .+..+.... .|
T Consensus 186 ------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~-~l~~i~~~~g~p~~~~~~~~~ 258 (367)
T 2fst_X 186 ------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHID-QLKLILRLVGTPGAELLKKIS 258 (367)
T ss_dssp -----------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCSCCHHHHTTCC
T ss_pred ------CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHHHHHhh
Confidence 22356899999999 6999999999999997532111 111111110 00
Q ss_pred ----------------Cc---hhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 732 ----------------DQ---ILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 732 ----------------~~---~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
.. .....++.+.....+||+.||++|||+.|+++
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~ 311 (367)
T 2fst_X 259 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALA 311 (367)
T ss_dssp CHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred hHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhc
Confidence 00 01122334445566999999999999999985
No 265
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=99.97 E-value=2.4e-32 Score=297.10 Aligned_cols=227 Identities=15% Similarity=0.080 Sum_probs=171.6
Q ss_pred cccccccccccceEEEEE-----ecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccC---CCCceeEEEEeecCCCCCc
Q 041479 524 LLNVSYESLVKATVYKGI-----LDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIR---HRNLVKIITACSTSDFQGN 595 (771)
Q Consensus 524 ~~~~~l~~~~~~~Vy~~~-----~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~---H~nIv~l~~~~~~~~~~~~ 595 (771)
.....+|+|.+|+||+|+ ...+++.||||++.... ..++.+|++++++++ |+||+++++++...+
T Consensus 68 ~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~---- 140 (365)
T 3e7e_A 68 YVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQN---- 140 (365)
T ss_dssp EEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEEEEECSS----
T ss_pred EEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhheeeecCC----
Confidence 334568999999999994 55667899999996543 457788888888887 999999999998876
Q ss_pred eeEEEEEEeccCCCCCCC--------cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCC---------
Q 041479 596 YFRALVYEFMHHGSLESC--------PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN--------- 658 (771)
Q Consensus 596 ~~~~lv~e~~~~g~L~~~--------~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~--------- 658 (771)
..|+|||||++|+|.++ ...+++..+..|+.|++.||+|||+. +|+||||||+|||++.
T Consensus 141 -~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~~~~~ 216 (365)
T 3e7e_A 141 -GSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQDDED 216 (365)
T ss_dssp -CEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC----
T ss_pred -CcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCccccc
Confidence 67999999999999776 23589999999999999999999985 8999999999999998
Q ss_pred --CCceEEecccCccccCcccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCcc
Q 041479 659 --DMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLD 721 (771)
Q Consensus 659 --~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~ 721 (771)
++.+||+|||+|+.+..... .......+||+.||||| +||++|||+||+.||.........
T Consensus 217 ~~~~~~kl~DFG~a~~~~~~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~ 294 (365)
T 3e7e_A 217 DLSAGLALIDLGQSIDMKLFPK--GTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECK 294 (365)
T ss_dssp --CTTEEECCCTTCEEGGGSCT--TEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEEE
T ss_pred cccCCEEEeeCchhhhhhccCC--CceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCcee
Confidence 89999999999975532221 12234467999999999 799999999999998543221110
Q ss_pred HHHHHHhhCCCchhhhcCccccccCcccChhchhhc-CCHHHHHHHHHHh
Q 041479 722 LHNFVKMALPDQILQVLDPLFLVGGVQEGEETAEEN-IKKGQIRESLIAI 770 (771)
Q Consensus 722 ~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~R-pt~~~vl~~L~~~ 770 (771)
. ...++.. ..+..+......|++.+|.+| |++.++.+.|+++
T Consensus 295 ~----~~~~~~~---~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~l~~~ 337 (365)
T 3e7e_A 295 P----EGLFRRL---PHLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKV 337 (365)
T ss_dssp E----CSCCTTC---SSHHHHHHHHHHHHCCCCTTCCCCHHHHHHHHHHH
T ss_pred e----chhcccc---CcHHHHHHHHHHHcCCCCCCcchHHHHHHHHHHHH
Confidence 0 0000000 011122233448899999998 6788888888775
No 266
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=99.97 E-value=9.1e-32 Score=283.96 Aligned_cols=228 Identities=22% Similarity=0.271 Sum_probs=174.3
Q ss_pred cccccccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEE
Q 041479 524 LLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALV 601 (771)
Q Consensus 524 ~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv 601 (771)
.....+|+|.+|+||+|+++.+++.||||++.... ....+.+.+|++++++++||||+++++++.+.+ ..|+|
T Consensus 6 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~lv 80 (299)
T 2r3i_A 6 QKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTEN-----KLYLV 80 (299)
T ss_dssp EEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETT-----EEEEE
T ss_pred hhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCC-----ceEEE
Confidence 34456899999999999999888899999996543 223467899999999999999999999998776 78999
Q ss_pred EEeccCCCCCCC-----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcc
Q 041479 602 YEFMHHGSLESC-----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEV 676 (771)
Q Consensus 602 ~e~~~~g~L~~~-----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~ 676 (771)
|||++ |+|.++ ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 81 ~e~~~-~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~ 156 (299)
T 2r3i_A 81 FEFLH-QDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 156 (299)
T ss_dssp EECCS-EEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCC
T ss_pred EEccc-CCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcchhhhhccCC
Confidence 99997 577655 24578899999999999999999996 9999999999999999999999999999765432
Q ss_pred cCCcccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhh-CCCc------
Q 041479 677 MSSNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMA-LPDQ------ 733 (771)
Q Consensus 677 ~~~~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~-~~~~------ 733 (771)
.. ......||+.|+||| +||++|||++|+.||.+..... .+....... .+..
T Consensus 157 ~~----~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 231 (299)
T 2r3i_A 157 VR----TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEID-QLFRIFRTLGTPDEVVWPGV 231 (299)
T ss_dssp SB----CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCTTTSTTG
T ss_pred cc----ccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCccHHH-HHHHHHHHhCCCchhhhhHh
Confidence 21 122346899999999 6999999999999997532211 122222211 1100
Q ss_pred --------------------hhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 734 --------------------ILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 734 --------------------~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
....+++.+.....+|++.||++|||+.++++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~~l~ 283 (299)
T 2r3i_A 232 TSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283 (299)
T ss_dssp GGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred hcCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 01123334444566999999999999999986
No 267
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=3.1e-31 Score=281.03 Aligned_cols=286 Identities=19% Similarity=0.202 Sum_probs=209.4
Q ss_pred ccceeeeecCCCCcEEEEEcCCCCCcccCCccccCCCCCcEEEcCCCcccccCCccccCCCCCCEEecccCcCcccCCcc
Q 041479 32 CQWLGVTCSLKYQRVILLNLSGQNLTGTASPYIGNLTFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNALQGQIPDS 111 (771)
Q Consensus 32 c~w~~v~c~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 111 (771)
|.|.+|.|+. ++++ .+|..+ .++|++|+|++|++++..+..|+++++|++|+|++|+++
T Consensus 7 C~~~~l~c~~------------~~l~-~ip~~~--~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~------ 65 (306)
T 2z66_A 7 CSGTEIRCNS------------KGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLS------ 65 (306)
T ss_dssp EETTEEECCS------------SCCS-SCCSCC--CTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCC------
T ss_pred eCCCEEEcCC------------CCcc-cCCCCC--CCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccC------
Confidence 7888887764 4565 344433 368999999999999755556899999999999999976
Q ss_pred cccCCcccccCCccccCCCCCCEEecccccCcCCCCccceeeecccccccccCccccCCCCCCEEecccCcCcccCCh-h
Q 041479 112 RLILNKLEGNIPSELGSLLKFKGLGLANNYFTGPIPHLNMFQVSVYSLTGSIPIQLLNITSMEYFHVSENQLVGELPP-H 190 (771)
Q Consensus 112 ~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~-~ 190 (771)
-.+..|..+..+++|++|++++|.++ .+|..+..+++|++|++++|+++ .++. .
T Consensus 66 ------~~~~~~~~~~~~~~L~~L~Ls~n~i~------------------~l~~~~~~l~~L~~L~l~~n~l~-~~~~~~ 120 (306)
T 2z66_A 66 ------FKGCCSQSDFGTTSLKYLDLSFNGVI------------------TMSSNFLGLEQLEHLDFQHSNLK-QMSEFS 120 (306)
T ss_dssp ------EEEEEEHHHHSCSCCCEEECCSCSEE------------------EEEEEEETCTTCCEEECTTSEEE-SSTTTT
T ss_pred ------cccCcccccccccccCEEECCCCccc------------------cChhhcCCCCCCCEEECCCCccc-ccccch
Confidence 12233566777888999999888876 45666788889999999999988 4554 4
Q ss_pred hhhCCCCCcEEEeecCcccccCCccccCCCCCCEEEccccccCC-CCCcCcccccCCCCCcEEEccCccccccCChhhhh
Q 041479 191 IGFTLPNVRILLLAGNQFFGNIPHSISNASKLEWLDFANNSLTG-LIPEDLDSLVNCTYLEVVSLSVNSLSGTLPNSLAN 269 (771)
Q Consensus 191 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~ 269 (771)
.+..+++|++|++++|++.+..+..|.++++|++|++++|.+++ ..|..| ..+++|++|++++|++++..|..+..
T Consensus 121 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~---~~l~~L~~L~Ls~n~l~~~~~~~~~~ 197 (306)
T 2z66_A 121 VFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIF---TELRNLTFLDLSQCQLEQLSPTAFNS 197 (306)
T ss_dssp TTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCC---TTCTTCCEEECTTSCCCEECTTTTTT
T ss_pred hhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHH---hhCcCCCEEECCCCCcCCcCHHHhcC
Confidence 44578888888888888888888888888888888888888876 456555 67788888888888888666777777
Q ss_pred cccccceeecccCcCcccCcccccccCCcceEecCCccceeccCccccCCC-CCCEEEccCCcccccCC--ccccccccc
Q 041479 270 FSSHLRYLYMSANPISGSIPTEIGNLKNLIIIAIEKFILIRNIPISVGYLL-KLQVLSLFENNISREIP--SSLGNFTFL 346 (771)
Q Consensus 270 l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p--~~~~~l~~L 346 (771)
+. +|++|++++|++++..+..|..+++|+.|++++|.+.+..|..+..++ +|++|+|++|.++...+ .....+...
T Consensus 198 l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~ 276 (306)
T 2z66_A 198 LS-SLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQ 276 (306)
T ss_dssp CT-TCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGGHHHHHHHHHT
T ss_pred CC-CCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccChHHHHHHHHhh
Confidence 65 688888888888876666777777777777777777777777777663 77777777777764321 112234455
Q ss_pred ccccccCccceecCCcccccc
Q 041479 347 TELNLCGNSIRGSVPSALGSC 367 (771)
Q Consensus 347 ~~L~Ls~N~l~~~~p~~~~~l 367 (771)
+.+.+..+.+....|..+.+.
T Consensus 277 ~~~~~~~~~~~C~~p~~~~g~ 297 (306)
T 2z66_A 277 RQLLVEVERMECATPSDKQGM 297 (306)
T ss_dssp GGGBSCGGGCBEEESGGGTTC
T ss_pred hhhhccccccccCCchhhCCc
Confidence 555666666665555555443
No 268
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=4e-34 Score=321.38 Aligned_cols=357 Identities=19% Similarity=0.144 Sum_probs=193.7
Q ss_pred CcEEEEEcCCCCCcccCCcc-ccCCCCCcEEEcCCCcccc----cCCccccCCCCCCEEecccCcCcccCCcccccCCcc
Q 041479 44 QRVILLNLSGQNLTGTASPY-IGNLTFLRLINLQQNNFSS----NIPHEIGRLFRLRHIIFNSNALQGQIPDSRLILNKL 118 (771)
Q Consensus 44 ~~l~~L~Ls~n~l~~~~~~~-~~~l~~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~l~~n~l 118 (771)
++++.|||++|+++...... +..+++|++|+|++|.+++ .++..+..+++|++|+|++|.+++
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~------------ 70 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGD------------ 70 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHH------------
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCCh------------
Confidence 57899999999998654443 7889999999999999985 357788999999999999999752
Q ss_pred cccCCcc-ccCCC----CCCEEecccccCcCCCCccceeeecccccccccCccccCCCCCCEEecccCcCcccCChhhh-
Q 041479 119 EGNIPSE-LGSLL----KFKGLGLANNYFTGPIPHLNMFQVSVYSLTGSIPIQLLNITSMEYFHVSENQLVGELPPHIG- 192 (771)
Q Consensus 119 ~~~~p~~-~~~l~----~L~~L~Ls~N~l~~~lp~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~- 192 (771)
..+.. +..+. +|++|+|++|++++.- .+.++..+..+++|++|++++|.+++..+..+.
T Consensus 71 --~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~-------------~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~ 135 (461)
T 1z7x_W 71 --VGVHCVLQGLQTPSCKIQKLSLQNCCLTGAG-------------CGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCE 135 (461)
T ss_dssp --HHHHHHHHTTCSTTCCCCEEECTTSCCBGGG-------------HHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHH
T ss_pred --HHHHHHHHHHhhCCCceeEEEccCCCCCHHH-------------HHHHHHHHccCCceeEEECCCCcCchHHHHHHHH
Confidence 11112 22344 6999999999887200 012344455555555555555555422222221
Q ss_pred ---hCCCCCcEEEeecCcccccC----CccccCCCCCCEEEccccccCCCCCcCccc-c-cCCCCCcEEEccCcccccc-
Q 041479 193 ---FTLPNVRILLLAGNQFFGNI----PHSISNASKLEWLDFANNSLTGLIPEDLDS-L-VNCTYLEVVSLSVNSLSGT- 262 (771)
Q Consensus 193 ---~~l~~L~~L~L~~N~l~~~~----p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-l-~~l~~L~~L~Ls~N~l~~~- 262 (771)
...++|++|+|++|++++.. +..+..+++|++|++++|.++...+..+.. + ..+++|++|++++|.+++.
T Consensus 136 ~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~ 215 (461)
T 1z7x_W 136 GLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDN 215 (461)
T ss_dssp HHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTH
T ss_pred HHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHH
Confidence 12334555555555555422 334444555555555555554322211100 0 0133555555555555532
Q ss_pred ---CChhhhhcccccceeecccCcCcccC-----cccccccCCcceEecCCccceec----cCccccCCCCCCEEEccCC
Q 041479 263 ---LPNSLANFSSHLRYLYMSANPISGSI-----PTEIGNLKNLIIIAIEKFILIRN----IPISVGYLLKLQVLSLFEN 330 (771)
Q Consensus 263 ---~p~~~~~l~~~L~~L~Ls~N~l~~~~-----p~~~~~l~~L~~L~l~~n~l~~~----~p~~~~~l~~L~~L~Ls~N 330 (771)
++..+..+. +|++|++++|.+++.. +..+..+++|+.|++++|.+... ++..+..+++|++|++++|
T Consensus 216 ~~~l~~~l~~~~-~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n 294 (461)
T 1z7x_W 216 CRDLCGIVASKA-SLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGN 294 (461)
T ss_dssp HHHHHHHHHHCT-TCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTC
T ss_pred HHHHHHHHHhCC-CccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCC
Confidence 334444333 4555555555554321 12222355555555555555432 3444455555555555555
Q ss_pred cccccCCcccccc-----cccccccccCccceec----CCcccccccce-eeecccCcccCCCCcCCCC-----CCCCCe
Q 041479 331 NISREIPSSLGNF-----TFLTELNLCGNSIRGS----VPSALGSCHQL-WLDLSHNHLTGPIPLAVGN-----PKSIPH 395 (771)
Q Consensus 331 ~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~----~p~~~~~l~~l-~L~Ls~N~l~~~~p~~~~~-----l~~L~~ 395 (771)
.++...+..+... ++|++|++++|.+++. ++..+..++.| .|++++|++++..+..+.. .++|++
T Consensus 295 ~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~ 374 (461)
T 1z7x_W 295 ELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRV 374 (461)
T ss_dssp CCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCE
T ss_pred CCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEE
Confidence 5543333223221 4555556665555533 23334444555 5556666555433322221 445666
Q ss_pred EECCCCcccc----cCCcchhhhhcccccccEEECcCCCCC
Q 041479 396 LDLSKNELSG----EIPSSLAWIFGYISIFAKLNLSYNNLD 432 (771)
Q Consensus 396 L~Ls~N~l~~----~~p~~l~~~~~~l~~L~~L~Ls~N~l~ 432 (771)
|+|++|++++ .+|..+. .+++|++|+|++|+++
T Consensus 375 L~L~~n~i~~~~~~~l~~~l~----~~~~L~~L~l~~N~i~ 411 (461)
T 1z7x_W 375 LWLADCDVSDSSCSSLAATLL----ANHSLRELDLSNNCLG 411 (461)
T ss_dssp EECTTSCCCHHHHHHHHHHHH----HCCCCCEEECCSSSCC
T ss_pred EECCCCCCChhhHHHHHHHHH----hCCCccEEECCCCCCC
Confidence 6666666653 3333332 4566666666666655
No 269
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=99.97 E-value=1.9e-31 Score=279.96 Aligned_cols=227 Identities=22% Similarity=0.195 Sum_probs=181.6
Q ss_pred ccccccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEE
Q 041479 525 LNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
....+|+|.+|+||+|+.+.+++.||||++.... ....+.+.+|++++++++||||+++++++.+.+ ..++||
T Consensus 26 i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-----~~~lv~ 100 (287)
T 2wei_A 26 IVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSS-----SFYIVG 100 (287)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSS-----EEEEEE
T ss_pred eeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCC-----eEEEEE
Confidence 3456899999999999999888899999996543 345678999999999999999999999998766 789999
Q ss_pred EeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCC---CceEEecccCccccCcc
Q 041479 603 EFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDND---MTAHMGDFGLTRFIPEV 676 (771)
Q Consensus 603 e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~---~~~kl~DfGla~~~~~~ 676 (771)
||+++++|.+. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.+ +.+||+|||+++.....
T Consensus 101 e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~ 177 (287)
T 2wei_A 101 ELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN 177 (287)
T ss_dssp CCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCC
T ss_pred EccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccCcceeecCC
Confidence 99999999665 34689999999999999999999986 99999999999999754 46999999999865432
Q ss_pred cCCcccccccccccccccchh--------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCC--chhhhcCc
Q 041479 677 MSSNQCSSVGLKGTVGYATPE--------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPD--QILQVLDP 740 (771)
Q Consensus 677 ~~~~~~~~~~~~gt~~y~aPE--------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 740 (771)
.. .....||+.|+||| +|+++|||++|+.||.+.... .....+.....+. .....+++
T Consensus 178 ~~-----~~~~~~~~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 251 (287)
T 2wei_A 178 TK-----MKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEY-DILKRVETGKYAFDLPQWRTISD 251 (287)
T ss_dssp SS-----CSCHHHHHTTCCHHHHTTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHCCCCCCSGGGTTSCH
T ss_pred Cc-----cccccCcccccChHHhcCCCCCchhhHhHHHHHHHHHhCCCCCCCCCHH-HHHHHHHcCCCCCCchhhhhcCH
Confidence 21 12345899999999 699999999999999753211 1122222333322 22234556
Q ss_pred cccccCcccChhchhhcCCHHHHHH
Q 041479 741 LFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 741 ~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
.+.....+||+.||++|||+.|+++
T Consensus 252 ~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 252 DAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp HHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHcccChhhCcCHHHHhc
Confidence 6666777999999999999999986
No 270
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=99.97 E-value=1e-31 Score=294.93 Aligned_cols=229 Identities=19% Similarity=0.192 Sum_probs=172.1
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCC-CCceeEEEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF-QGNYFRALV 601 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~-~~~~~~~lv 601 (771)
+.....+|+|.+|+||+|++..++ .||+|++..... ...+|+++++.++|||||++++++...+. .+..+.++|
T Consensus 42 Y~~~~~lG~G~~g~V~~a~~~~~~-~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv 116 (394)
T 4e7w_A 42 YTNCKVIGNGSFGVVFQAKLVESD-EVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLV 116 (394)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTE-EEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEE
T ss_pred EEEeEEEeeCCCeEEEEEEECCCC-eEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEE
Confidence 344556899999999999998877 599998854332 22369999999999999999999865442 333467899
Q ss_pred EEeccCCCCCCC------cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeC-CCCceEEecccCccccC
Q 041479 602 YEFMHHGSLESC------PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD-NDMTAHMGDFGLTRFIP 674 (771)
Q Consensus 602 ~e~~~~g~L~~~------~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~-~~~~~kl~DfGla~~~~ 674 (771)
|||++++.+... ...+++..+..++.|+++||+|||+. +|+||||||+|||++ .++.+||+|||+|+...
T Consensus 117 ~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~ 193 (394)
T 4e7w_A 117 LEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILI 193 (394)
T ss_dssp EECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred eeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCCCccccc
Confidence 999987544322 45688999999999999999999996 999999999999999 79999999999998664
Q ss_pred cccCCcccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhC-C------
Q 041479 675 EVMSSNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMAL-P------ 731 (771)
Q Consensus 675 ~~~~~~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~-~------ 731 (771)
.... .....||+.|+||| +||++|||++|+.||.+..... .+.++..... |
T Consensus 194 ~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~-~l~~i~~~~g~p~~~~~~ 267 (394)
T 4e7w_A 194 AGEP-----NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGID-QLVEIIKVLGTPSREQIK 267 (394)
T ss_dssp TTCC-----CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHH-HHHHHHHHHCCCCHHHHH
T ss_pred CCCC-----CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHHHH
Confidence 3322 22356899999999 6999999999999997532111 1222222110 0
Q ss_pred ----------------Cc----hhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 732 ----------------DQ----ILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 732 ----------------~~----~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
.. ....+++.+.....+||+.||++|||+.|+++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 321 (394)
T 4e7w_A 268 TMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALC 321 (394)
T ss_dssp HHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred hhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHHHHhc
Confidence 00 01113344445666999999999999999985
No 271
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=99.97 E-value=2.1e-32 Score=298.94 Aligned_cols=225 Identities=17% Similarity=0.194 Sum_probs=165.9
Q ss_pred cccccccccccccceEEEEEecCCCeEEEEEEeecc---chhhHHHHHHHH---HHHhccCCCCceeEE-------EEee
Q 041479 522 DLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLH---QRGALKSFMAEC---QALRNIRHRNLVKII-------TACS 588 (771)
Q Consensus 522 ~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~---~~~~~~~~~~E~---~~l~~l~H~nIv~l~-------~~~~ 588 (771)
.+.....+|+|.+|+||+|++..+++.||||++... .....+.+.+|+ +++++++|||||+++ +++.
T Consensus 74 ~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~ 153 (377)
T 3byv_A 74 TLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVK 153 (377)
T ss_dssp EEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEE
T ss_pred eEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhh
Confidence 344456799999999999999888889999999743 344568899999 555666899999998 5555
Q ss_pred cCCC---------CCc---eeEEEEEEeccCCCCCCCcc---cC-------CHHHHHHHHHHHHHHHHHHHhcCCCCeEe
Q 041479 589 TSDF---------QGN---YFRALVYEFMHHGSLESCPR---IL-------SFLRRLNIAIDVASALEYLHHHCKKPIVH 646 (771)
Q Consensus 589 ~~~~---------~~~---~~~~lv~e~~~~g~L~~~~~---~l-------~~~~~~~i~~~ia~gL~~LH~~~~~~ivH 646 (771)
+.+. .+. ...|+||||+ +|+|.++.. .+ ++..+..|+.|++.||+|||+. +|+|
T Consensus 154 ~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH 229 (377)
T 3byv_A 154 DPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLVH 229 (377)
T ss_dssp CTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TEEC
T ss_pred ccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---Ceec
Confidence 4421 000 1268999999 689977621 23 3477888999999999999996 8999
Q ss_pred cCCCCCCeeeCCCCceEEecccCccccCcccCCcccccccccccccccchh--------------------------HHH
Q 041479 647 CDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE--------------------------YGI 700 (771)
Q Consensus 647 rdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE--------------------------~Gv 700 (771)
|||||+|||++.++.+||+|||+|+.... .....+| +.|+||| |||
T Consensus 230 rDikp~NIll~~~~~~kL~DFG~a~~~~~-------~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~ 301 (377)
T 3byv_A 230 TYLRPVDIVLDQRGGVFLTGFEHLVRDGA-------RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGL 301 (377)
T ss_dssp SCCCGGGEEECTTCCEEECCGGGCEETTC-------EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHH
T ss_pred CCCCHHHEEEcCCCCEEEEechhheecCC-------cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHH
Confidence 99999999999999999999999985332 1223467 9999999 599
Q ss_pred HHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 701 LLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 701 ~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
++|||++|+.||.+...... . ... . .....+++.+.....+||+.||++|||+.|+++
T Consensus 302 il~elltg~~Pf~~~~~~~~-~-~~~---~--~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 302 VIYWIWCADLPITKDAALGG-S-EWI---F--RSCKNIPQPVRALLEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp HHHHHHHSSCCC------CC-S-GGG---G--SSCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHT
T ss_pred HHHHHHHCCCCCcccccccc-h-hhh---h--hhccCCCHHHHHHHHHHcCCCchhCCCHHHHhh
Confidence 99999999999965322111 0 000 0 011233455556667999999999999999985
No 272
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=99.97 E-value=2.4e-31 Score=280.95 Aligned_cols=235 Identities=18% Similarity=0.202 Sum_probs=171.6
Q ss_pred cccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCC--------CCc
Q 041479 524 LLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF--------QGN 595 (771)
Q Consensus 524 ~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~--------~~~ 595 (771)
.....+|+|.+|+||+|++..+++.||||++... ....+.+.+|++++++++||||+++++++.+... .+.
T Consensus 9 ~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~ 87 (303)
T 1zy4_A 9 EEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKK 87 (303)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------CE
T ss_pred hhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccccC
Confidence 3345689999999999999988899999999643 3456789999999999999999999999865321 223
Q ss_pred eeEEEEEEeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCcc
Q 041479 596 YFRALVYEFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTR 671 (771)
Q Consensus 596 ~~~~lv~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~ 671 (771)
...|+||||+++|+|.++ ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 88 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg~~~ 164 (303)
T 1zy4_A 88 STLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFGLAK 164 (303)
T ss_dssp EEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCCCCS
T ss_pred CceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCEEEeeCcchh
Confidence 477999999999999876 23567888999999999999999996 89999999999999999999999999998
Q ss_pred ccCcccCC----------cccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHH
Q 041479 672 FIPEVMSS----------NQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNF 725 (771)
Q Consensus 672 ~~~~~~~~----------~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~ 725 (771)
........ .........||+.|+||| +||++|||++ ||............+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~---p~~~~~~~~~~~~~~ 241 (303)
T 1zy4_A 165 NVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERVNILKKL 241 (303)
T ss_dssp CTTC-------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHHHHHS---CCSSHHHHHHHHHHH
T ss_pred hcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHHHHHh---ccCCchhHHHHHHhc
Confidence 65432110 011123456899999999 6999999998 553211111111111
Q ss_pred HHh--hCCCchhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 726 VKM--ALPDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 726 ~~~--~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
... ..+........+.+.....+||+.||++|||+.++++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 242 RSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp HSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred cccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 111 1223333333344555667999999999999999986
No 273
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=99.97 E-value=2.3e-31 Score=295.21 Aligned_cols=174 Identities=20% Similarity=0.261 Sum_probs=147.5
Q ss_pred ccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhcc------CCCCceeEEEEeecCCCCCceeE
Q 041479 525 LNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNI------RHRNLVKIITACSTSDFQGNYFR 598 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l------~H~nIv~l~~~~~~~~~~~~~~~ 598 (771)
....+|+|.+|+||+|++..+++.||||++... ....+.+.+|+++++.+ +|+||+++++++...+ ..
T Consensus 101 ~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~-----~~ 174 (429)
T 3kvw_A 101 VLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRN-----HI 174 (429)
T ss_dssp EEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETT-----EE
T ss_pred EEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCC-----eE
Confidence 345689999999999999999999999999654 33456788888888887 5779999999998776 78
Q ss_pred EEEEEeccCCCCCCC-----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCc--eEEecccCcc
Q 041479 599 ALVYEFMHHGSLESC-----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMT--AHMGDFGLTR 671 (771)
Q Consensus 599 ~lv~e~~~~g~L~~~-----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~--~kl~DfGla~ 671 (771)
++||||+. |+|.++ ...+++..+..++.|++.||+|||+. +|+||||||+|||++.++. +||+|||+|+
T Consensus 175 ~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~ 250 (429)
T 3kvw_A 175 CMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFGSSC 250 (429)
T ss_dssp EEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECCCTTCE
T ss_pred EEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEeecccce
Confidence 99999996 577654 23489999999999999999999996 8999999999999999887 9999999997
Q ss_pred ccCcccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCcc
Q 041479 672 FIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDM 715 (771)
Q Consensus 672 ~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~ 715 (771)
..... ....+||+.|+||| +||++|||++|+.||.+.
T Consensus 251 ~~~~~-------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~ 302 (429)
T 3kvw_A 251 YEHQR-------VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGE 302 (429)
T ss_dssp ETTCC-------CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred ecCCc-------ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCC
Confidence 54332 12346899999999 699999999999999653
No 274
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=99.97 E-value=3.6e-32 Score=296.35 Aligned_cols=232 Identities=13% Similarity=-0.007 Sum_probs=161.7
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhcc--CCCCceeEE-------EEeecC
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNI--RHRNLVKII-------TACSTS 590 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l--~H~nIv~l~-------~~~~~~ 590 (771)
+.....+|+|.+|+||+|++..+++.||||++.... ....+.+.+|+.+++.+ +|||||+++ +++...
T Consensus 64 y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~~ 143 (371)
T 3q60_A 64 LKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQ 143 (371)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEET
T ss_pred eeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheecC
Confidence 445567999999999999999999999999997643 23456778885544444 699988865 333322
Q ss_pred CCC------------CceeEEEEEEeccCCCCCCCc----ccCCHHHH------HHHHHHHHHHHHHHHhcCCCCeEecC
Q 041479 591 DFQ------------GNYFRALVYEFMHHGSLESCP----RILSFLRR------LNIAIDVASALEYLHHHCKKPIVHCD 648 (771)
Q Consensus 591 ~~~------------~~~~~~lv~e~~~~g~L~~~~----~~l~~~~~------~~i~~~ia~gL~~LH~~~~~~ivHrd 648 (771)
+.. .....|+|||||+ |+|.++. ..+++..+ ..++.|++.||+|||+. +|+|||
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~---~ivHrD 219 (371)
T 3q60_A 144 SQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSK---GLVHGH 219 (371)
T ss_dssp TSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---TEEETT
T ss_pred CCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHHHC---CCccCc
Confidence 210 0124799999998 8998762 23455556 78889999999999986 899999
Q ss_pred CCCCCeeeCCCCceEEecccCccccCcccCCcccccccccccccccchh-----------------HHHHHHHHHhCCCC
Q 041479 649 LKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE-----------------YGILLLEIFTGKRP 711 (771)
Q Consensus 649 lk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE-----------------~Gv~l~el~tg~~P 711 (771)
|||+|||++.++.+||+|||+|+....... ...||+.|+||| +||++|||++|+.|
T Consensus 220 ikp~NIll~~~~~~kL~DFG~a~~~~~~~~-------~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~P 292 (371)
T 3q60_A 220 FTPDNLFIMPDGRLMLGDVSALWKVGTRGP-------ASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLP 292 (371)
T ss_dssp CSGGGEEECTTSCEEECCGGGEEETTCEEE-------GGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCS
T ss_pred CCHHHEEECCCCCEEEEecceeeecCCCcc-------CccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCC
Confidence 999999999999999999999986543211 234679999999 69999999999999
Q ss_pred CCccccCCccHH------HHHHhhCCCchhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 712 TSDMFTEGLDLH------NFVKMALPDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 712 ~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
|.+......... ..............+++.+.....+||+.||++|||+.++++
T Consensus 293 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 293 FGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAME 352 (371)
T ss_dssp TTBCCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTT
T ss_pred CCCcCcccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 976533211100 000011111222344556666677999999999999999974
No 275
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=99.97 E-value=1.3e-31 Score=291.04 Aligned_cols=232 Identities=20% Similarity=0.180 Sum_probs=168.5
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccc-----------hhhHHHHHHHHHHHhccCCCCceeEEEEeecCC
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ-----------RGALKSFMAECQALRNIRHRNLVKIITACSTSD 591 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~-----------~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~ 591 (771)
+.....+|+|.+|+||+|++.. ++.||||++.... ....+.+.+|++++++++||||+++++++...+
T Consensus 24 y~~~~~lg~G~~g~V~~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 102 (362)
T 3pg1_A 24 YTVQRFISSGSYGAVCAGVDSE-GIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFE 102 (362)
T ss_dssp CEEEEEEEEETTEEEEEEECTT-SCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEECC
T ss_pred eEEeEEeccCCCEEEEEEECCC-CCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEecc
Confidence 3345568999999999999876 5699999995432 223478999999999999999999999986654
Q ss_pred CCCceeEEEEEEeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecc
Q 041479 592 FQGNYFRALVYEFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDF 667 (771)
Q Consensus 592 ~~~~~~~~lv~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~Df 667 (771)
.......|+||||++ |++.+. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 103 ~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Df 178 (362)
T 3pg1_A 103 EPAMHKLYLVTELMR-TDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGNILLADNNDITICDF 178 (362)
T ss_dssp TTTCCEEEEEEECCS-EEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCT
T ss_pred CCCcceEEEEEccCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHHEEEcCCCCEEEEec
Confidence 333447899999998 566544 33589999999999999999999996 8999999999999999999999999
Q ss_pred cCccccCcccCCcccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCC
Q 041479 668 GLTRFIPEVMSSNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALP 731 (771)
Q Consensus 668 Gla~~~~~~~~~~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~ 731 (771)
|+++...... ......||+.|+||| +||++|||++|+.||.+..... .+..+......
T Consensus 179 g~~~~~~~~~-----~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~~~ 252 (362)
T 3pg1_A 179 NLAREDTADA-----NKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYN-QLNKIVEVVGT 252 (362)
T ss_dssp TC--------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCC
T ss_pred Cccccccccc-----ccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHcCC
Confidence 9997543322 122346899999999 6999999999999997532111 11111111110
Q ss_pred C------------------------------chhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 732 D------------------------------QILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 732 ~------------------------------~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
. ......++.+.....+||+.||++|||+.|+++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 316 (362)
T 3pg1_A 253 PKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALR 316 (362)
T ss_dssp CCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHc
Confidence 0 011122344445566999999999999999985
No 276
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=99.97 E-value=1.3e-31 Score=295.61 Aligned_cols=177 Identities=20% Similarity=0.240 Sum_probs=133.2
Q ss_pred cccccccceEEEEEec--CCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEec
Q 041479 528 SYESLVKATVYKGILD--LDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFM 605 (771)
Q Consensus 528 ~l~~~~~~~Vy~~~~~--~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~~ 605 (771)
.+|+|.+|+||+|+++ .+++.||||++.... ..+.+.+|++++++++|||||++++++...... ..|+||||+
T Consensus 28 ~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~---~~~lv~e~~ 102 (405)
T 3rgf_A 28 KVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADR---KVWLLFDYA 102 (405)
T ss_dssp CCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTT---EEEEEEECC
T ss_pred EeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCC---eEEEEEeCC
Confidence 5899999999999976 356799999996443 235788999999999999999999998653211 689999999
Q ss_pred cCCCCCCCc------------ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeee----CCCCceEEecccC
Q 041479 606 HHGSLESCP------------RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLL----DNDMTAHMGDFGL 669 (771)
Q Consensus 606 ~~g~L~~~~------------~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl----~~~~~~kl~DfGl 669 (771)
++ +|.+.. ..+++..+..++.|++.||+|||+. +|+||||||+|||+ +.++.+||+|||+
T Consensus 103 ~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~ 178 (405)
T 3rgf_A 103 EH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMGF 178 (405)
T ss_dssp SE-EHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTCEEECCTTC
T ss_pred CC-CHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCcEEEEECCC
Confidence 75 654431 1488999999999999999999996 89999999999999 6778999999999
Q ss_pred ccccCcccCCcccccccccccccccchh----------------HHHHHHHHHhCCCCCCc
Q 041479 670 TRFIPEVMSSNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSD 714 (771)
Q Consensus 670 a~~~~~~~~~~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~ 714 (771)
|+........ .......+||+.|+||| +||++|||++|+.||..
T Consensus 179 a~~~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~ 238 (405)
T 3rgf_A 179 ARLFNSPLKP-LADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 238 (405)
T ss_dssp CC-----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred ceecCCCCcc-cccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCC
Confidence 9876532211 12223457999999999 69999999999999964
No 277
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=99.97 E-value=1.6e-31 Score=291.21 Aligned_cols=230 Identities=22% Similarity=0.244 Sum_probs=174.3
Q ss_pred cccccccccccceEEEEEecCCCeEEEEEEeecc--chhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCC-CceeEEE
Q 041479 524 LLNVSYESLVKATVYKGILDLDQTFIAVKVLFLH--QRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQ-GNYFRAL 600 (771)
Q Consensus 524 ~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~-~~~~~~l 600 (771)
.....+|+|.+|+||+|+++.+++.||||++... .....+++.+|+.+++.++||||+++++++...+.. .....|+
T Consensus 45 ~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~l 124 (371)
T 4exu_A 45 VSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYL 124 (371)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCCEE
T ss_pred EEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeEEE
Confidence 3445689999999999999999999999999654 234467899999999999999999999998765521 1123489
Q ss_pred EEEeccCCCCCCC-cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCC
Q 041479 601 VYEFMHHGSLESC-PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSS 679 (771)
Q Consensus 601 v~e~~~~g~L~~~-~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 679 (771)
||||+. |+|.+. ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 125 v~e~~~-~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~--- 197 (371)
T 4exu_A 125 VMPFMQ-TDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHADAE--- 197 (371)
T ss_dssp EEECCC-EEHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTTCC---------
T ss_pred EEcccc-ccHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecCcccccccC---
Confidence 999997 566554 45689999999999999999999996 9999999999999999999999999999855432
Q ss_pred cccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhh--------------
Q 041479 680 NQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMA-------------- 729 (771)
Q Consensus 680 ~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~-------------- 729 (771)
....+||+.|+||| +||++|||++|+.||.+..... .+.......
T Consensus 198 ----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~ 272 (371)
T 4exu_A 198 ----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQILKVTGVPGTEFVQKLNDK 272 (371)
T ss_dssp ------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCHHHHTTCSCH
T ss_pred ----cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHHhCCCcHHHHHHhhhh
Confidence 22356899999999 6999999999999997532111 111111110
Q ss_pred --------CC----Cc---hhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 730 --------LP----DQ---ILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 730 --------~~----~~---~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
.+ .. ....+++.+.....+||+.||++|||+.|+++
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 323 (371)
T 4exu_A 273 AAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 323 (371)
T ss_dssp HHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred hhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHHHhc
Confidence 00 00 11123444555666999999999999999985
No 278
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=99.97 E-value=3e-32 Score=290.48 Aligned_cols=237 Identities=21% Similarity=0.224 Sum_probs=179.7
Q ss_pred ccccccccccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeE
Q 041479 521 KDLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFR 598 (771)
Q Consensus 521 ~~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 598 (771)
..+.....+|+|.+|+||+|+++. .||||++.... ....+.+.+|+.++++++||||+++++++.+.+ ..
T Consensus 33 ~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~-----~~ 104 (319)
T 2y4i_B 33 EQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPP-----HL 104 (319)
T ss_dssp SCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSS-----CE
T ss_pred HHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCC-----ce
Confidence 344556678999999999998863 49999996542 233467889999999999999999999998776 67
Q ss_pred EEEEEeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccC
Q 041479 599 ALVYEFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIP 674 (771)
Q Consensus 599 ~lv~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~ 674 (771)
++||||+++++|.++ ...+++.++..++.|++.||+|||+. +|+||||||+||+++ ++.+||+|||+++...
T Consensus 105 ~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~ 180 (319)
T 2y4i_B 105 AIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFGLFSISG 180 (319)
T ss_dssp EEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCSCCC---
T ss_pred EEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecCCccccc
Confidence 999999999999766 23588999999999999999999996 999999999999998 6799999999987653
Q ss_pred cccCC-cccccccccccccccchh------------------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhh
Q 041479 675 EVMSS-NQCSSVGLKGTVGYATPE------------------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMA 729 (771)
Q Consensus 675 ~~~~~-~~~~~~~~~gt~~y~aPE------------------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~ 729 (771)
..... .........||+.|+||| +||++|||++|+.||.+..... .........
T Consensus 181 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~-~~~~~~~~~ 259 (319)
T 2y4i_B 181 VLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEA-IIWQMGTGM 259 (319)
T ss_dssp -------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHH-HHHHHHTTC
T ss_pred cccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHhccCC
Confidence 22111 111222346899999999 5999999999999997532211 122222222
Q ss_pred CCCchhhhcCccccccCcccChhchhhcCCHHHHHHHHHHh
Q 041479 730 LPDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRESLIAI 770 (771)
Q Consensus 730 ~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~~L~~~ 770 (771)
.+......+++.+.....+||..||++|||+.++++.|+++
T Consensus 260 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l 300 (319)
T 2y4i_B 260 KPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKL 300 (319)
T ss_dssp CCCCCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC
T ss_pred CCCCCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence 23222334556666677799999999999999999999875
No 279
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=99.97 E-value=3.2e-31 Score=286.91 Aligned_cols=231 Identities=23% Similarity=0.247 Sum_probs=175.4
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeecc--chhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCC-CceeEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLH--QRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQ-GNYFRA 599 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~-~~~~~~ 599 (771)
+.....+|+|.+|+||+|+++.+++.||||++... .....+++.+|+.+++.++||||+++++++...+.. .....|
T Consensus 26 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 105 (353)
T 3coi_A 26 YVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFY 105 (353)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCE
T ss_pred EEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeEE
Confidence 44456689999999999999999999999999653 234467899999999999999999999998765421 112358
Q ss_pred EEEEeccCCCCCCC-cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccC
Q 041479 600 LVYEFMHHGSLESC-PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMS 678 (771)
Q Consensus 600 lv~e~~~~g~L~~~-~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 678 (771)
+||||++ |+|.+. ...+++.++..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++.....
T Consensus 106 lv~e~~~-~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~-- 179 (353)
T 3coi_A 106 LVMPFMQ-TDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFGLARHADAE-- 179 (353)
T ss_dssp EEEECCS-EEGGGTTTSCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTTCTTC------
T ss_pred EEecccc-CCHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeecccccCCCCC--
Confidence 9999997 588766 44689999999999999999999996 9999999999999999999999999999864332
Q ss_pred Ccccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHh--------------
Q 041479 679 SNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKM-------------- 728 (771)
Q Consensus 679 ~~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~-------------- 728 (771)
.....||+.|+||| +||++|||++|+.||.+..... .+......
T Consensus 180 -----~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~ 253 (353)
T 3coi_A 180 -----MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLD-QLTQILKVTGVPGTEFVQKLND 253 (353)
T ss_dssp ---------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHH-HHHHHHHHHCBCCHHHHTTCSC
T ss_pred -----ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHHHHHHhh
Confidence 12346899999999 6999999999999997532111 11111111
Q ss_pred --------hCCC-------chhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 729 --------ALPD-------QILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 729 --------~~~~-------~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
..+. .....+++.+.....+|++.||++|||+.++++
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~ 305 (353)
T 3coi_A 254 KAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALT 305 (353)
T ss_dssp HHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred HHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 0110 011223444445666999999999999999985
No 280
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=99.97 E-value=3.3e-31 Score=281.78 Aligned_cols=230 Identities=19% Similarity=0.239 Sum_probs=175.2
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccc--hhhHHHHHHHHHHHhccC--CCCceeEEEEeecCCCCCceeE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--RGALKSFMAECQALRNIR--HRNLVKIITACSTSDFQGNYFR 598 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--~~~~~~~~~E~~~l~~l~--H~nIv~l~~~~~~~~~~~~~~~ 598 (771)
+.....+|+|.+|+||+|++.. ++.||||++.... ....+.+.+|++++++++ ||||+++++++.+.+ ..
T Consensus 30 y~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~-----~~ 103 (313)
T 3cek_A 30 YSILKQIGSGGSSKVFQVLNEK-KQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQ-----YI 103 (313)
T ss_dssp EEEEEEEECCSSEEEEEEECTT-CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSS-----EE
T ss_pred EEEEEEecCCCCEEEEEEEcCC-CcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCC-----EE
Confidence 3445578999999999999876 5699999996543 345678999999999997 599999999998876 78
Q ss_pred EEEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCc
Q 041479 599 ALVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPE 675 (771)
Q Consensus 599 ~lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~ 675 (771)
|+||| +.+++|.++ ...+++.++..++.|++.||+|||+. +|+||||||+||++++ +.+||+|||+++....
T Consensus 104 ~lv~e-~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~ 178 (313)
T 3cek_A 104 YMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKLIDFGIANQMQP 178 (313)
T ss_dssp EEEEC-CCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEECCCSSSCC---
T ss_pred EEEEe-cCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEEeeccccccccC
Confidence 99999 557888766 34688999999999999999999996 9999999999999974 8999999999987644
Q ss_pred ccCCcccccccccccccccchh--------------------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhh
Q 041479 676 VMSSNQCSSVGLKGTVGYATPE--------------------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMA 729 (771)
Q Consensus 676 ~~~~~~~~~~~~~gt~~y~aPE--------------------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~ 729 (771)
... ........||+.|+||| +||++|||++|+.||.+.......+.......
T Consensus 179 ~~~--~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~ 256 (313)
T 3cek_A 179 DTT--SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPN 256 (313)
T ss_dssp -------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTT
T ss_pred ccc--cccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHhcc
Confidence 322 11122346899999999 59999999999999976432222223333333
Q ss_pred CCCchhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 730 LPDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 730 ~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
.....+...+..+.....+||+.||++|||+.|+++
T Consensus 257 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 292 (313)
T 3cek_A 257 HEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA 292 (313)
T ss_dssp SCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred cccCCcccchHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 333344444555666677999999999999999985
No 281
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=99.97 E-value=1.6e-31 Score=285.94 Aligned_cols=231 Identities=21% Similarity=0.212 Sum_probs=162.3
Q ss_pred cccccccccccccceEEEEEecCCCeEEEEEEeeccc-hhhHHHHHHHHH-HHhccCCCCceeEEEEeecCCCCCceeEE
Q 041479 522 DLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ-RGALKSFMAECQ-ALRNIRHRNLVKIITACSTSDFQGNYFRA 599 (771)
Q Consensus 522 ~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~E~~-~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 599 (771)
.+.....+|+|.+|+||+|+++.+++.||||++.... .....++.+|+. +++.++||||+++++++.+.+ ..+
T Consensus 23 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~-----~~~ 97 (327)
T 3aln_A 23 DLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREG-----DCW 97 (327)
T ss_dssp SEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSS-----EEE
T ss_pred HhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCC-----ceE
Confidence 3445566899999999999999899999999997543 334456667776 777789999999999998776 789
Q ss_pred EEEEeccCCCCCCC--------cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCcc
Q 041479 600 LVYEFMHHGSLESC--------PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTR 671 (771)
Q Consensus 600 lv~e~~~~g~L~~~--------~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~ 671 (771)
+||||+++ +|.++ ...+++..+..++.|++.||.|||+. .+|+||||||+||+++.++.+||+|||+++
T Consensus 98 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~--~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~ 174 (327)
T 3aln_A 98 ICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN--LKIIHRDIKPSNILLDRSGNIKLCDFGISG 174 (327)
T ss_dssp EEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHH--HSCCCSCCCGGGEEEETTTEEEECCCSSSC
T ss_pred EEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhcc--CCEeECCCCHHHEEEcCCCCEEEccCCCce
Confidence 99999985 55433 34688999999999999999999984 389999999999999999999999999998
Q ss_pred ccCcccCCcccccccccccccccchh-------------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCC-
Q 041479 672 FIPEVMSSNQCSSVGLKGTVGYATPE-------------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALP- 731 (771)
Q Consensus 672 ~~~~~~~~~~~~~~~~~gt~~y~aPE-------------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~- 731 (771)
....... .....||+.|+||| +||++|||++|+.||.+.......+........+
T Consensus 175 ~~~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~ 249 (327)
T 3aln_A 175 QLVDSIA-----KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQ 249 (327)
T ss_dssp C-----------------------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCCCSCCCC
T ss_pred ecccccc-----cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHhcCCCCC
Confidence 6543221 12236899999999 6999999999999997532111111111111111
Q ss_pred --CchhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 732 --DQILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 732 --~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
......+++.+.....+||+.||++|||+.++++
T Consensus 250 ~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 250 LSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp CCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 1112234555656677999999999999999975
No 282
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=99.97 E-value=2.7e-31 Score=288.18 Aligned_cols=235 Identities=17% Similarity=0.127 Sum_probs=164.6
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCC--CCceeEEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDF--QGNYFRAL 600 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~--~~~~~~~l 600 (771)
+.....+|+|.+|+||+|+++.+++.||||++.... ....++.+|++.++.++|||||++++++...+. ....+.++
T Consensus 25 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~~l 103 (360)
T 3e3p_A 25 FQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNV 103 (360)
T ss_dssp EEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEEEE
T ss_pred eEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccccccceeEEE
Confidence 444567899999999999999988999999985432 334567788888999999999999999866432 22235789
Q ss_pred EEEeccCCCCCC------CcccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCC-CCceEEecccCcccc
Q 041479 601 VYEFMHHGSLES------CPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN-DMTAHMGDFGLTRFI 673 (771)
Q Consensus 601 v~e~~~~g~L~~------~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~-~~~~kl~DfGla~~~ 673 (771)
||||++++.+.. ....+++..+..++.|++.||.|||.+ +.+|+||||||+||+++. ++.+||+|||+++..
T Consensus 104 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~-~~~ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~~ 182 (360)
T 3e3p_A 104 VMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLP-SVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKL 182 (360)
T ss_dssp EEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTST-TTCCBCSCCCGGGEEEETTTTEEEECCCTTCBCC
T ss_pred EeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCC-CCCeecCcCCHHHEEEeCCCCcEEEeeCCCceec
Confidence 999998753221 134678889999999999999999921 249999999999999996 899999999999876
Q ss_pred CcccCCcccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCC--ch-
Q 041479 674 PEVMSSNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPD--QI- 734 (771)
Q Consensus 674 ~~~~~~~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~--~~- 734 (771)
..... .....||+.|+||| +||++|||++|+.||.+.... ..+..+....... ..
T Consensus 183 ~~~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~ 256 (360)
T 3e3p_A 183 SPSEP-----NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSA-GQLHEIVRVLGCPSREVL 256 (360)
T ss_dssp CTTSC-----CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH-HHHHHHHHHHCCCCHHHH
T ss_pred CCCCC-----cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChH-HHHHHHHHHcCCCCHHHH
Confidence 54322 22346899999999 699999999999999753221 1122222211100 00
Q ss_pred --------------------hhh-------cCccccccCcccChhchhhcCCHHHHHH
Q 041479 735 --------------------LQV-------LDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 735 --------------------~~~-------~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
... .++.+.....+||+.||++|||+.|+++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 314 (360)
T 3e3p_A 257 RKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEALC 314 (360)
T ss_dssp HHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCccccCCHHHHhc
Confidence 000 1223344566999999999999999985
No 283
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=99.97 E-value=6e-31 Score=282.57 Aligned_cols=224 Identities=18% Similarity=0.205 Sum_probs=153.7
Q ss_pred cccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEEEEEeccC
Q 041479 528 SYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRALVYEFMHH 607 (771)
Q Consensus 528 ~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~~~~ 607 (771)
.+|+|.+|+||+|+++.+++.||||++..... ..+ .....++.++||||+++++++.... .+....++||||+++
T Consensus 36 ~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~---e~~~~~~~~~h~~i~~~~~~~~~~~-~~~~~~~lv~e~~~g 110 (336)
T 3fhr_A 36 VLGLGVNGKVLECFHRRTGQKCALKLLYDSPK-ARQ---EVDHHWQASGGPHIVCILDVYENMH-HGKRCLLIIMECMEG 110 (336)
T ss_dssp EEEEETTEEEEEEEETTTCCEEEEEEEESSHH-HHH---HHHHHHHHTTSTTBCCEEEEEEEEE-TTEEEEEEEEECCTT
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEecCcHH-HHH---HHHHHHHhcCCCChHHHHHHHhhcc-CCCceEEEEEeccCC
Confidence 48999999999999999899999999964321 112 2223356678999999999986532 122367999999999
Q ss_pred CCCCCC-----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCC---CCceEEecccCccccCcccCC
Q 041479 608 GSLESC-----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN---DMTAHMGDFGLTRFIPEVMSS 679 (771)
Q Consensus 608 g~L~~~-----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~---~~~~kl~DfGla~~~~~~~~~ 679 (771)
|+|.++ ...+++.++..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||+++......
T Consensus 111 g~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~~-- 185 (336)
T 3fhr_A 111 GELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNA-- 185 (336)
T ss_dssp EEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC------
T ss_pred CCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEeccccceeccccc--
Confidence 999766 23589999999999999999999996 9999999999999976 4559999999998554322
Q ss_pred cccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCcc---HHHHH--HhhCCCchhhhcC
Q 041479 680 NQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLD---LHNFV--KMALPDQILQVLD 739 (771)
Q Consensus 680 ~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~---~~~~~--~~~~~~~~~~~~~ 739 (771)
....+||+.|+||| +||++|||++|+.||.+....... ..... ....+......++
T Consensus 186 ----~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (336)
T 3fhr_A 186 ----LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVS 261 (336)
T ss_dssp ----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------CCCTTTSTTCC
T ss_pred ----cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccccCchhhccCC
Confidence 12346899999999 699999999999999653222110 11111 1112222334456
Q ss_pred ccccccCcccChhchhhcCCHHHHHH
Q 041479 740 PLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 740 ~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
+.+.....+||+.||++|||+.|+++
T Consensus 262 ~~~~~li~~~L~~dP~~Rpt~~ell~ 287 (336)
T 3fhr_A 262 EDAKQLIRLLLKTDPTERLTITQFMN 287 (336)
T ss_dssp HHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 66666777999999999999999986
No 284
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.97 E-value=1.1e-32 Score=294.67 Aligned_cols=281 Identities=15% Similarity=0.232 Sum_probs=181.0
Q ss_pred CCCCCCCCCCCC--CCCCccceeeeecCCCCcEEEEEcCCCCCccc----CCccc--cCCCCCcEEEcCCCcccccCCcc
Q 041479 16 DDPFGALSTWND--SVNFCQWLGVTCSLKYQRVILLNLSGQNLTGT----ASPYI--GNLTFLRLINLQQNNFSSNIPHE 87 (771)
Q Consensus 16 ~~~~~~~~~w~~--~~~~c~w~~v~c~~~~~~l~~L~Ls~n~l~~~----~~~~~--~~l~~L~~L~Ls~N~l~~~~p~~ 87 (771)
.|+..++.+|.. ..|+|.|.+..|...... -.-+...|. .+..+ ...++++.|+|++|+++ .+|..
T Consensus 26 ~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~-----~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~ 99 (328)
T 4fcg_A 26 RPYHDVLSQWQRHYNADRNRWHSAWRQANSNN-----PQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQ 99 (328)
T ss_dssp CCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTC-----TTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSC
T ss_pred chHHHHHHHHHHhccCCchhhhhhhccccccc-----ccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChh
Confidence 445556778865 358999999988422110 011122221 11111 24578999999999998 57888
Q ss_pred ccCCCCCCEEecccCcCcccCCcccccCCcccccCCccccCCCCCCEEecccccCcCCCCccceeeecccccccccCccc
Q 041479 88 IGRLFRLRHIIFNSNALQGQIPDSRLILNKLEGNIPSELGSLLKFKGLGLANNYFTGPIPHLNMFQVSVYSLTGSIPIQL 167 (771)
Q Consensus 88 ~~~l~~L~~L~Ls~N~l~~~~p~~~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~L~~l~l~~n~l~~~~p~~~ 167 (771)
+.++++|++|+|++|.++ .+|..++++++|++|+|++|+|+ .+|..+
T Consensus 100 l~~l~~L~~L~L~~n~l~---------------~lp~~~~~l~~L~~L~Ls~n~l~------------------~lp~~l 146 (328)
T 4fcg_A 100 AFRLSHLQHMTIDAAGLM---------------ELPDTMQQFAGLETLTLARNPLR------------------ALPASI 146 (328)
T ss_dssp GGGGTTCSEEEEESSCCC---------------CCCSCGGGGTTCSEEEEESCCCC------------------CCCGGG
T ss_pred hhhCCCCCEEECCCCCcc---------------chhHHHhccCCCCEEECCCCccc------------------cCcHHH
Confidence 888999999999999865 67777888888888888888876 567778
Q ss_pred cCCCCCCEEecccCcCcccCChhhhhCCCCCcEEEeecCcccccCCccccCCCCCCEEEccccccCCCCCcCcccccCCC
Q 041479 168 LNITSMEYFHVSENQLVGELPPHIGFTLPNVRILLLAGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCT 247 (771)
Q Consensus 168 ~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~ 247 (771)
.++++|++|++++|++.+.+|..+. . ...++.|.++++|++|+|++|+|+ .+|..+ .+++
T Consensus 147 ~~l~~L~~L~L~~n~~~~~~p~~~~-~---------------~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l---~~l~ 206 (328)
T 4fcg_A 147 ASLNRLRELSIRACPELTELPEPLA-S---------------TDASGEHQGLVNLQSLRLEWTGIR-SLPASI---ANLQ 206 (328)
T ss_dssp GGCTTCCEEEEEEETTCCCCCSCSE-E---------------EC-CCCEEESTTCCEEEEEEECCC-CCCGGG---GGCT
T ss_pred hcCcCCCEEECCCCCCccccChhHh-h---------------ccchhhhccCCCCCEEECcCCCcC-cchHhh---cCCC
Confidence 8888888888888877778877553 1 011223444555555555555555 334333 4455
Q ss_pred CCcEEEccCccccccCChhhhhcccccceeecccCcCcccCcccccccCCcceEecCCccceeccCccccCCCCCCEEEc
Q 041479 248 YLEVVSLSVNSLSGTLPNSLANFSSHLRYLYMSANPISGSIPTEIGNLKNLIIIAIEKFILIRNIPISVGYLLKLQVLSL 327 (771)
Q Consensus 248 ~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L 327 (771)
+|++|+|++|+++ .+|..+..+. +|++|++++|.+.+.+|..|+++++|+.|++++|++.+.+|..+..+++|++|+|
T Consensus 207 ~L~~L~L~~N~l~-~l~~~l~~l~-~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L 284 (328)
T 4fcg_A 207 NLKSLKIRNSPLS-ALGPAIHHLP-KLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDL 284 (328)
T ss_dssp TCCEEEEESSCCC-CCCGGGGGCT-TCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEEC
T ss_pred CCCEEEccCCCCC-cCchhhccCC-CCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeC
Confidence 5555555555555 3444455543 5666666666666666666666666666666666666666666666666666666
Q ss_pred cCCcccccCCcccccccccccccccCccce
Q 041479 328 FENNISREIPSSLGNFTFLTELNLCGNSIR 357 (771)
Q Consensus 328 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 357 (771)
++|++.+.+|..++.+++|+.+++..|.+.
T Consensus 285 ~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 285 RGCVNLSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp TTCTTCCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred CCCCchhhccHHHhhccCceEEeCCHHHHH
Confidence 666666666666666666666666666554
No 285
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=99.97 E-value=6e-31 Score=280.20 Aligned_cols=231 Identities=21% Similarity=0.172 Sum_probs=163.3
Q ss_pred cccccccccccccceEEEEEecCCCeEEEEEEeeccch--hhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEE
Q 041479 522 DLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQR--GALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRA 599 (771)
Q Consensus 522 ~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~ 599 (771)
.+.....+|+|.+|+||+|+++.+++.||||++..... ...+.+..+..+++.++||||+++++++.+.+ ..+
T Consensus 26 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~-----~~~ 100 (318)
T 2dyl_A 26 DLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNT-----DVF 100 (318)
T ss_dssp GEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSS-----EEE
T ss_pred cccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCC-----cEE
Confidence 34445578999999999999998888999999975532 22334445556788889999999999998776 789
Q ss_pred EEEEeccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCc
Q 041479 600 LVYEFMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPE 675 (771)
Q Consensus 600 lv~e~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~ 675 (771)
+||||+ ++.+... ...+++..+..++.|++.||+|||+. .+|+||||||+||+++.++.+||+|||+++....
T Consensus 101 lv~e~~-~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~--~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~ 177 (318)
T 2dyl_A 101 IAMELM-GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEK--HGVIHRDVKPSNILLDERGQIKLCDFGISGRLVD 177 (318)
T ss_dssp EEECCC-SEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHH--HCCCCCCCCGGGEEECTTSCEEECCCTTC-----
T ss_pred EEEecc-CCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhh--CCEEeCCCCHHHEEECCCCCEEEEECCCchhccC
Confidence 999999 4444333 34688999999999999999999983 2899999999999999999999999999976543
Q ss_pred ccCCcccccccccccccccchh--------------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCC-ch
Q 041479 676 VMSSNQCSSVGLKGTVGYATPE--------------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPD-QI 734 (771)
Q Consensus 676 ~~~~~~~~~~~~~gt~~y~aPE--------------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~-~~ 734 (771)
... .....||+.|+||| +||++|||++|+.||.+.......+........+. ..
T Consensus 178 ~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 252 (318)
T 2dyl_A 178 DKA-----KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPG 252 (318)
T ss_dssp --------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCCCCCCS
T ss_pred Ccc-----ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCCCCCCc
Confidence 221 12346899999999 69999999999999975322212222222222221 11
Q ss_pred hhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 735 LQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 735 ~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
...+++.+.....+||+.||++|||+.++++
T Consensus 253 ~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 253 HMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp SSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred cCCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 1234556666777999999999999999985
No 286
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.97 E-value=1e-33 Score=318.01 Aligned_cols=360 Identities=18% Similarity=0.141 Sum_probs=271.4
Q ss_pred CCCCcEEEcCCCcccccCCcc-ccCCCCCCEEecccCcCcccCCcccccCCcccccCCccccCCCCCCEEecccccCcCC
Q 041479 67 LTFLRLINLQQNNFSSNIPHE-IGRLFRLRHIIFNSNALQGQIPDSRLILNKLEGNIPSELGSLLKFKGLGLANNYFTGP 145 (771)
Q Consensus 67 l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~p~~~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 145 (771)
+++|++|||++|+++...... |..+++|++|+|++|.+++... ..++..+..+++|++|+|++|++++
T Consensus 2 ~~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~----------~~l~~~l~~~~~L~~L~Ls~n~l~~- 70 (461)
T 1z7x_W 2 SLDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARC----------KDISSALRVNPALAELNLRSNELGD- 70 (461)
T ss_dssp CEEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHH----------HHHHHHHHTCTTCCEEECTTCCCHH-
T ss_pred CccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHH----------HHHHHHHHhCCCcCEEeCCCCcCCh-
Confidence 467899999999998644333 8899999999999999762100 1356678888999999999998863
Q ss_pred CCccceeeecccccccccCcc-ccCCC----CCCEEecccCcCcc----cCChhhhhCCCCCcEEEeecCcccccCCccc
Q 041479 146 IPHLNMFQVSVYSLTGSIPIQ-LLNIT----SMEYFHVSENQLVG----ELPPHIGFTLPNVRILLLAGNQFFGNIPHSI 216 (771)
Q Consensus 146 lp~L~~l~l~~n~l~~~~p~~-~~~l~----~L~~L~Ls~N~l~g----~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~ 216 (771)
..+.. +..+. +|++|+|++|+++. .+|..+. .+++|++|+|++|++++..+..+
T Consensus 71 ----------------~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~-~~~~L~~L~Ls~n~i~~~~~~~l 133 (461)
T 1z7x_W 71 ----------------VGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLR-TLPTLQELHLSDNLLGDAGLQLL 133 (461)
T ss_dssp ----------------HHHHHHHHTTCSTTCCCCEEECTTSCCBGGGHHHHHHHTT-SCTTCCEEECCSSBCHHHHHHHH
T ss_pred ----------------HHHHHHHHHHhhCCCceeEEEccCCCCCHHHHHHHHHHHc-cCCceeEEECCCCcCchHHHHHH
Confidence 11111 12333 79999999999983 4566555 89999999999999986544433
Q ss_pred c-----CCCCCCEEEccccccCCCCCcCc-ccccCCCCCcEEEccCccccccCChhhhh----cccccceeecccCcCcc
Q 041479 217 S-----NASKLEWLDFANNSLTGLIPEDL-DSLVNCTYLEVVSLSVNSLSGTLPNSLAN----FSSHLRYLYMSANPISG 286 (771)
Q Consensus 217 ~-----~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~----l~~~L~~L~Ls~N~l~~ 286 (771)
. ..++|++|+|++|++++.....+ ..+..+++|++|++++|.+++..+..+.. ..++|++|++++|.+++
T Consensus 134 ~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~ 213 (461)
T 1z7x_W 134 CEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTS 213 (461)
T ss_dssp HHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBT
T ss_pred HHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcH
Confidence 3 36789999999999986432221 12366789999999999998654444433 12379999999999986
Q ss_pred c----CcccccccCCcceEecCCccceecc-----CccccCCCCCCEEEccCCccccc----CCcccccccccccccccC
Q 041479 287 S----IPTEIGNLKNLIIIAIEKFILIRNI-----PISVGYLLKLQVLSLFENNISRE----IPSSLGNFTFLTELNLCG 353 (771)
Q Consensus 287 ~----~p~~~~~l~~L~~L~l~~n~l~~~~-----p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~ 353 (771)
. ++..+..+++|+.|++++|.+.... +..+..+++|++|++++|+++.. ++..+..+++|++|++++
T Consensus 214 ~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~ 293 (461)
T 1z7x_W 214 DNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAG 293 (461)
T ss_dssp THHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTT
T ss_pred HHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCC
Confidence 4 5778889999999999999886542 22334689999999999999864 577788899999999999
Q ss_pred ccceecCCcccccc-----cce-eeecccCcccCC----CCcCCCCCCCCCeEECCCCcccccCCcchhhhhcc-ccccc
Q 041479 354 NSIRGSVPSALGSC-----HQL-WLDLSHNHLTGP----IPLAVGNPKSIPHLDLSKNELSGEIPSSLAWIFGY-ISIFA 422 (771)
Q Consensus 354 N~l~~~~p~~~~~l-----~~l-~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~-l~~L~ 422 (771)
|.+++..+..+... +.| .|++++|.+++. ++..+..+++|++|+|++|++++..+..+...+.. .++|+
T Consensus 294 n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~ 373 (461)
T 1z7x_W 294 NELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLR 373 (461)
T ss_dssp CCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCC
T ss_pred CCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceE
Confidence 99986554444432 467 899999999865 45667778999999999999997666655533332 67999
Q ss_pred EEECcCCCCCC----CCCccc-cccccccccccCCCc
Q 041479 423 KLNLSYNNLDG----DVPRKM-IFKNASAISEAGNEK 454 (771)
Q Consensus 423 ~L~Ls~N~l~~----~~p~~~-~~~~~~~~~~~~n~~ 454 (771)
.|+|++|++++ .+|..+ ...++..+.+.+|+.
T Consensus 374 ~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i 410 (461)
T 1z7x_W 374 VLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCL 410 (461)
T ss_dssp EEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSC
T ss_pred EEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCC
Confidence 99999999985 455432 245677778888753
No 287
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=99.97 E-value=7.4e-31 Score=280.64 Aligned_cols=233 Identities=22% Similarity=0.278 Sum_probs=173.5
Q ss_pred ccccccccccccceEEEEEec-CCCeEEEEEEeeccch--hhHHHHHHHHHHHhcc---CCCCceeEEEEeecCCCCCce
Q 041479 523 LLLNVSYESLVKATVYKGILD-LDQTFIAVKVLFLHQR--GALKSFMAECQALRNI---RHRNLVKIITACSTSDFQGNY 596 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~-~~~~~vAvK~~~~~~~--~~~~~~~~E~~~l~~l---~H~nIv~l~~~~~~~~~~~~~ 596 (771)
+.....+|+|.+|+||+|++. .+++.||||++..... .....+.+|+.+++.+ +||||+++++++.........
T Consensus 13 y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~ 92 (326)
T 1blx_A 13 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRET 92 (326)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEE
T ss_pred eeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCCc
Confidence 444567899999999999995 6778999999965432 2234567788777766 899999999998733222234
Q ss_pred eEEEEEEeccCCCCCCC-----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCcc
Q 041479 597 FRALVYEFMHHGSLESC-----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTR 671 (771)
Q Consensus 597 ~~~lv~e~~~~g~L~~~-----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~ 671 (771)
..++||||++ |+|.++ ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|||+++
T Consensus 93 ~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl~Dfg~~~ 168 (326)
T 1blx_A 93 KLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLAR 168 (326)
T ss_dssp EEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECSCCSCC
T ss_pred eEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEEecCcccc
Confidence 7899999998 588665 23488999999999999999999996 99999999999999999999999999998
Q ss_pred ccCcccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhh-CCC---
Q 041479 672 FIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMA-LPD--- 732 (771)
Q Consensus 672 ~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~-~~~--- 732 (771)
...... ......||+.|+||| +||++|||++|+.||.+..... .+....... .+.
T Consensus 169 ~~~~~~-----~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~ 242 (326)
T 1blx_A 169 IYSFQM-----ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD-QLGKILDVIGLPGEED 242 (326)
T ss_dssp CCCGGG-----GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH-HHHHHHHHHCCCCGGG
T ss_pred cccCCC-----CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHH-HHHHHHHHcCCCCccc
Confidence 654322 223456899999999 6999999999999997532211 122222111 110
Q ss_pred ---------------------chhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 733 ---------------------QILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 733 ---------------------~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
.....+++.+.....+||+.||++|||+.|+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 296 (326)
T 1blx_A 243 WPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 296 (326)
T ss_dssp SCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 011122333334556999999999999999984
No 288
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.97 E-value=1.3e-30 Score=299.82 Aligned_cols=292 Identities=25% Similarity=0.295 Sum_probs=198.7
Q ss_pred CCCCCCCCCCCCCCCccceeeee------cCCCCcEEEEEcCCCCCcccCCccccCCCCCcEEEcCCCcccccCCccccC
Q 041479 17 DPFGALSTWNDSVNFCQWLGVTC------SLKYQRVILLNLSGQNLTGTASPYIGNLTFLRLINLQQNNFSSNIPHEIGR 90 (771)
Q Consensus 17 ~~~~~~~~w~~~~~~c~w~~v~c------~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 90 (771)
+....+++|....+||.|.|..| .....+++.|++++|+|+ .+|..+. ++|++|+|++|+|++ +|. .
T Consensus 7 ~~~~~w~~W~~~~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~~-lp~---~ 79 (622)
T 3g06_A 7 EYDAVWSAWRRAAPAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTS-LPA---L 79 (622)
T ss_dssp ---CHHHHHHHTCCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCSC-CCC---C
T ss_pred HHHHHHHHHHhcCCcchhccccccCcccccccCCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCCC-CCC---c
Confidence 34556788987789999977432 222246889999999999 6666655 899999999999985 665 5
Q ss_pred CCCCCEEecccCcCcccCCcccccCCcccccCCccccCCCCCCEEecccccCcCCCCccceeeecccccccccCccccCC
Q 041479 91 LFRLRHIIFNSNALQGQIPDSRLILNKLEGNIPSELGSLLKFKGLGLANNYFTGPIPHLNMFQVSVYSLTGSIPIQLLNI 170 (771)
Q Consensus 91 l~~L~~L~Ls~N~l~~~~p~~~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~L~~l~l~~n~l~~~~p~~~~~l 170 (771)
+++|++|+|++|+|+ .+|. .+++|++|+|++|+|++ +|. .+
T Consensus 80 l~~L~~L~Ls~N~l~---------------~lp~---~l~~L~~L~Ls~N~l~~------------------l~~---~l 120 (622)
T 3g06_A 80 PPELRTLEVSGNQLT---------------SLPV---LPPGLLELSIFSNPLTH------------------LPA---LP 120 (622)
T ss_dssp CTTCCEEEECSCCCS---------------CCCC---CCTTCCEEEECSCCCCC------------------CCC---CC
T ss_pred CCCCCEEEcCCCcCC---------------cCCC---CCCCCCEEECcCCcCCC------------------CCC---CC
Confidence 789999999999976 3444 56788888888887772 333 45
Q ss_pred CCCCEEecccCcCcccCChhhhhCCCCCcEEEeecCcccccCCccccCCCCCCEEEccccccCCCCCcCcccccCCCCCc
Q 041479 171 TSMEYFHVSENQLVGELPPHIGFTLPNVRILLLAGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLE 250 (771)
Q Consensus 171 ~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~ 250 (771)
++|+.|++++|+++ .+|. .+++|++|+|++|+|++ +|. .+++|+.|++++|.|+++ | ..+++|+
T Consensus 121 ~~L~~L~L~~N~l~-~lp~----~l~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L~~N~l~~l-~------~~~~~L~ 184 (622)
T 3g06_A 121 SGLCKLWIFGNQLT-SLPV----LPPGLQELSVSDNQLAS-LPA---LPSELCKLWAYNNQLTSL-P------MLPSGLQ 184 (622)
T ss_dssp TTCCEEECCSSCCS-CCCC----CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSCC-C------CCCTTCC
T ss_pred CCcCEEECCCCCCC-cCCC----CCCCCCEEECcCCcCCC-cCC---ccCCCCEEECCCCCCCCC-c------ccCCCCc
Confidence 77888888888887 5775 34778888888888874 343 246677888888887754 3 2346677
Q ss_pred EEEccCccccccCChhhhhcccccceeecccCcCcccCcccccccCCcceEecCCccceeccCccccCCCCCCEEEccCC
Q 041479 251 VVSLSVNSLSGTLPNSLANFSSHLRYLYMSANPISGSIPTEIGNLKNLIIIAIEKFILIRNIPISVGYLLKLQVLSLFEN 330 (771)
Q Consensus 251 ~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N 330 (771)
.|++++|+|+ .+|..+ ++|+.|++++|.|+. +|. .+++|+.|+|++|
T Consensus 185 ~L~Ls~N~l~-~l~~~~----~~L~~L~L~~N~l~~-l~~---------------------------~~~~L~~L~Ls~N 231 (622)
T 3g06_A 185 ELSVSDNQLA-SLPTLP----SELYKLWAYNNRLTS-LPA---------------------------LPSGLKELIVSGN 231 (622)
T ss_dssp EEECCSSCCS-CCCCCC----TTCCEEECCSSCCSS-CCC---------------------------CCTTCCEEECCSS
T ss_pred EEECCCCCCC-CCCCcc----chhhEEECcCCcccc-cCC---------------------------CCCCCCEEEccCC
Confidence 7777777777 455432 357777777777762 322 1245666666666
Q ss_pred cccccCCcccccccccccccccCccceecCCcccccccce-eeecccCcccCCCCcCCCCCCCCCeEECCCCcccccCCc
Q 041479 331 NISREIPSSLGNFTFLTELNLCGNSIRGSVPSALGSCHQL-WLDLSHNHLTGPIPLAVGNPKSIPHLDLSKNELSGEIPS 409 (771)
Q Consensus 331 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 409 (771)
+|++ +| ..+++|+.|+|++|+|++ +|. .++.| .|+|++|+|+ .+|..|..+++|+.|+|++|++++.+|.
T Consensus 232 ~L~~-lp---~~l~~L~~L~Ls~N~L~~-lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~ 302 (622)
T 3g06_A 232 RLTS-LP---VLPSELKELMVSGNRLTS-LPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQ 302 (622)
T ss_dssp CCSC-CC---CCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHH
T ss_pred ccCc-CC---CCCCcCcEEECCCCCCCc-CCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCCCCcCHH
Confidence 6663 44 344667777777777663 333 23444 5666677666 4566677777888888888888777766
Q ss_pred chh
Q 041479 410 SLA 412 (771)
Q Consensus 410 ~l~ 412 (771)
.+.
T Consensus 303 ~l~ 305 (622)
T 3g06_A 303 ALR 305 (622)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
No 289
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=99.97 E-value=5.6e-31 Score=280.86 Aligned_cols=220 Identities=19% Similarity=0.172 Sum_probs=177.5
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccch------hhHHHHHHHHHHHhccC--CCCceeEEEEeecCCCCC
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQR------GALKSFMAECQALRNIR--HRNLVKIITACSTSDFQG 594 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~------~~~~~~~~E~~~l~~l~--H~nIv~l~~~~~~~~~~~ 594 (771)
+.....+|+|.+|+||+|++..+++.||||++..... ...+.+.+|+.++++++ ||||+++++++...+
T Consensus 45 y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~--- 121 (320)
T 3a99_A 45 YQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPD--- 121 (320)
T ss_dssp EEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSS---
T ss_pred eEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCC---
Confidence 3445568999999999999999999999999965432 12356778999999996 599999999998776
Q ss_pred ceeEEEEEEeccC-CCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeC-CCCceEEecccC
Q 041479 595 NYFRALVYEFMHH-GSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD-NDMTAHMGDFGL 669 (771)
Q Consensus 595 ~~~~~lv~e~~~~-g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~-~~~~~kl~DfGl 669 (771)
..++||||+.+ ++|.++ ...+++..+..++.|++.||+|||+. +|+||||||+||+++ .++.+||+|||+
T Consensus 122 --~~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~kL~Dfg~ 196 (320)
T 3a99_A 122 --SFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLIDFGS 196 (320)
T ss_dssp --EEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCTT
T ss_pred --cEEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEEEeeCcc
Confidence 78999999976 788766 34688999999999999999999986 999999999999999 788999999999
Q ss_pred ccccCcccCCcccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCc
Q 041479 670 TRFIPEVMSSNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQ 733 (771)
Q Consensus 670 a~~~~~~~~~~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~ 733 (771)
++...... .....||+.|+||| +||++|||++|+.||... .+...... .
T Consensus 197 ~~~~~~~~------~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~-------~~~~~~~~--~ 261 (320)
T 3a99_A 197 GALLKDTV------YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD-------EEIIRGQV--F 261 (320)
T ss_dssp CEECCSSC------BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH-------HHHHHCCC--C
T ss_pred cccccccc------ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCCh-------hhhhcccc--c
Confidence 98665322 12346899999999 699999999999999642 11222111 1
Q ss_pred hhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 734 ILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 734 ~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
....+++.+.....+||+.||++|||+.|+++
T Consensus 262 ~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 262 FRQRVSSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp CSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 22344555666677999999999999999986
No 290
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=99.97 E-value=7e-31 Score=288.79 Aligned_cols=180 Identities=21% Similarity=0.258 Sum_probs=147.2
Q ss_pred cccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccC--------CCCceeEEEEeecCCCCCc
Q 041479 524 LLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIR--------HRNLVKIITACSTSDFQGN 595 (771)
Q Consensus 524 ~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~--------H~nIv~l~~~~~~~~~~~~ 595 (771)
.....+|+|.+|+||+|++..+++.||||++... ....+.+.+|+++++.++ ||||+++++++..... ..
T Consensus 40 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~-~~ 117 (397)
T 1wak_A 40 HVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGV-NG 117 (397)
T ss_dssp EEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEET-TE
T ss_pred EEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCC-CC
Confidence 3345689999999999999999999999999643 345678899999999996 7889999999873321 12
Q ss_pred eeEEEEEEeccCCCCCCC-----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCC----------
Q 041479 596 YFRALVYEFMHHGSLESC-----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDM---------- 660 (771)
Q Consensus 596 ~~~~lv~e~~~~g~L~~~-----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~---------- 660 (771)
...|+||||+. |++.+. ...+++..+..++.|++.||+|||+.+ +|+||||||+|||++.++
T Consensus 118 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~~~~~~~~~~~ 194 (397)
T 1wak_A 118 THICMVFEVLG-HHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNEQYIRRLAAEA 194 (397)
T ss_dssp EEEEEEECCCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCHHHHHHHHHHH
T ss_pred ceEEEEEeccC-ccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccchhhhhhhhhh
Confidence 36899999995 454332 245899999999999999999999842 899999999999999775
Q ss_pred ---------------------------------------ceEEecccCccccCcccCCcccccccccccccccchh----
Q 041479 661 ---------------------------------------TAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---- 697 (771)
Q Consensus 661 ---------------------------------------~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE---- 697 (771)
.+||+|||+++..... ....+||+.|+|||
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~-------~~~~~gt~~y~aPE~~~~ 267 (397)
T 1wak_A 195 TEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH-------FTEDIQTRQYRSLEVLIG 267 (397)
T ss_dssp C---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC-------SCSCCSCGGGCCHHHHHT
T ss_pred HHHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc-------CccCCCCCcccCChhhcC
Confidence 7999999999865432 12346899999999
Q ss_pred -----------HHHHHHHHHhCCCCCCcc
Q 041479 698 -----------YGILLLEIFTGKRPTSDM 715 (771)
Q Consensus 698 -----------~Gv~l~el~tg~~P~~~~ 715 (771)
+||++|||++|+.||...
T Consensus 268 ~~~~~~~DiwslG~il~elltg~~pf~~~ 296 (397)
T 1wak_A 268 SGYNTPADIWSTACMAFELATGDYLFEPH 296 (397)
T ss_dssp SCCCTHHHHHHHHHHHHHHHHSSCSCCCC
T ss_pred CCCCcHHHHHHHHHHHHHHhhCCCCCCCC
Confidence 699999999999999753
No 291
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=99.97 E-value=4.1e-31 Score=280.84 Aligned_cols=219 Identities=20% Similarity=0.175 Sum_probs=173.2
Q ss_pred cccccccccccceEEEEEecCCCeEEEEEEeeccch------hhHHHHHHHHHHHhcc----CCCCceeEEEEeecCCCC
Q 041479 524 LLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQR------GALKSFMAECQALRNI----RHRNLVKIITACSTSDFQ 593 (771)
Q Consensus 524 ~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~------~~~~~~~~E~~~l~~l----~H~nIv~l~~~~~~~~~~ 593 (771)
.....+|+|.+|+||+|++..+++.||||++..... .....+.+|+.++.++ +||||+++++++.+.+
T Consensus 34 ~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~~-- 111 (312)
T 2iwi_A 34 RLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQE-- 111 (312)
T ss_dssp EEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC------
T ss_pred EEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecCC--
Confidence 344568999999999999998899999999965432 1234567899999998 8999999999987765
Q ss_pred CceeEEEEEEe-ccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeC-CCCceEEeccc
Q 041479 594 GNYFRALVYEF-MHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD-NDMTAHMGDFG 668 (771)
Q Consensus 594 ~~~~~~lv~e~-~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~-~~~~~kl~DfG 668 (771)
..++|||| +.+++|.++ ...+++..+..++.|++.||+|||+. +|+||||||+||+++ .++.+||+|||
T Consensus 112 ---~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~kl~dfg 185 (312)
T 2iwi_A 112 ---GFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGCAKLIDFG 185 (312)
T ss_dssp ----CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTEEEECCCS
T ss_pred ---eEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCeEEEEEcc
Confidence 67999999 788999776 34589999999999999999999996 899999999999999 88999999999
Q ss_pred CccccCcccCCcccccccccccccccchh----------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCC
Q 041479 669 LTRFIPEVMSSNQCSSVGLKGTVGYATPE----------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPD 732 (771)
Q Consensus 669 la~~~~~~~~~~~~~~~~~~gt~~y~aPE----------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~ 732 (771)
+++...... .....||+.|+||| +|+++||+++|+.||... .+..... .
T Consensus 186 ~~~~~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~-------~~~~~~~--~ 250 (312)
T 2iwi_A 186 SGALLHDEP------YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERD-------QEILEAE--L 250 (312)
T ss_dssp SCEECCSSC------BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH-------HHHHHTC--C
T ss_pred hhhhcccCc------ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCCh-------HHHhhhc--c
Confidence 998665422 12346899999999 699999999999999642 1222221 1
Q ss_pred chhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 733 QILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 733 ~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
.....+++.+.....+||+.||++|||+.|+++
T Consensus 251 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~ 283 (312)
T 2iwi_A 251 HFPAHVSPDCCALIRRCLAPKPSSRPSLEEILL 283 (312)
T ss_dssp CCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred CCcccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 223345556666677999999999999999986
No 292
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.97 E-value=1.8e-30 Score=275.11 Aligned_cols=251 Identities=21% Similarity=0.214 Sum_probs=191.8
Q ss_pred CEEecccCcCcccCChhhhhCCCCCcEEEeecCcccccCCccccCCCCCCEEEccccccCCCC--CcCcccccCCCCCcE
Q 041479 174 EYFHVSENQLVGELPPHIGFTLPNVRILLLAGNQFFGNIPHSISNASKLEWLDFANNSLTGLI--PEDLDSLVNCTYLEV 251 (771)
Q Consensus 174 ~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~--p~~~~~l~~l~~L~~ 251 (771)
+.++++++.++ .+|..+. ++|++|+|++|+|+.+.+..|.++++|++|+|++|+++... |..+ ..+++|++
T Consensus 10 ~~l~c~~~~l~-~ip~~~~---~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~---~~~~~L~~ 82 (306)
T 2z66_A 10 TEIRCNSKGLT-SVPTGIP---SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSD---FGTTSLKY 82 (306)
T ss_dssp TEEECCSSCCS-SCCSCCC---TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHH---HSCSCCCE
T ss_pred CEEEcCCCCcc-cCCCCCC---CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCccccc---ccccccCE
Confidence 46777777777 7776543 57788888888887655556778888888888888776331 3333 45677888
Q ss_pred EEccCccccccCChhhhhcccccceeecccCcCcccCc-ccccccCCcceEecCCccceeccCccccCCCCCCEEEccCC
Q 041479 252 VSLSVNSLSGTLPNSLANFSSHLRYLYMSANPISGSIP-TEIGNLKNLIIIAIEKFILIRNIPISVGYLLKLQVLSLFEN 330 (771)
Q Consensus 252 L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N 330 (771)
|++++|.++ .+|..+..+. +|++|++++|++++..+ ..|..+++|+.|++++|.+.+..|..+..+++|++|++++|
T Consensus 83 L~Ls~n~i~-~l~~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 160 (306)
T 2z66_A 83 LDLSFNGVI-TMSSNFLGLE-QLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGN 160 (306)
T ss_dssp EECCSCSEE-EEEEEEETCT-TCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTC
T ss_pred EECCCCccc-cChhhcCCCC-CCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCC
Confidence 888888877 5666666665 68888888888875554 56778888888888888887777777888888888888888
Q ss_pred cccc-cCCcccccccccccccccCccceecCCcccccccce-eeecccCcccCCCCcCCCCCCCCCeEECCCCcccccCC
Q 041479 331 NISR-EIPSSLGNFTFLTELNLCGNSIRGSVPSALGSCHQL-WLDLSHNHLTGPIPLAVGNPKSIPHLDLSKNELSGEIP 408 (771)
Q Consensus 331 ~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 408 (771)
++++ ..|..+..+++|++|+|++|++++..|..+..++.| .|++++|++++..+..|..+++|++|+|++|++++..|
T Consensus 161 ~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 240 (306)
T 2z66_A 161 SFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKK 240 (306)
T ss_dssp EEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSS
T ss_pred ccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCCcccCH
Confidence 8875 577788888888888888888887778888888888 78888888887777778888888888888888887777
Q ss_pred cchhhhhccc-ccccEEECcCCCCCCCCCc
Q 041479 409 SSLAWIFGYI-SIFAKLNLSYNNLDGDVPR 437 (771)
Q Consensus 409 ~~l~~~~~~l-~~L~~L~Ls~N~l~~~~p~ 437 (771)
..+. .+ ++|+.|+|++|+++|.++.
T Consensus 241 ~~~~----~~~~~L~~L~L~~N~~~~~c~~ 266 (306)
T 2z66_A 241 QELQ----HFPSSLAFLNLTQNDFACTCEH 266 (306)
T ss_dssp SSCC----CCCTTCCEEECTTCCEECSGGG
T ss_pred HHHH----hhhccCCEEEccCCCeecccCh
Confidence 7654 55 4788888888888877654
No 293
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.97 E-value=1.9e-30 Score=304.96 Aligned_cols=227 Identities=20% Similarity=0.240 Sum_probs=178.0
Q ss_pred ccccccccccccceEEEEEecC-CCeEEEEEEeecc-chhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEE
Q 041479 523 LLLNVSYESLVKATVYKGILDL-DQTFIAVKVLFLH-QRGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRAL 600 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~-~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~l 600 (771)
+.....+|+|.+|+||+|++.. +++.||||++... .....+.+.+|++++++++|||||++++++...+..+....|+
T Consensus 82 y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~~l 161 (681)
T 2pzi_A 82 YEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYI 161 (681)
T ss_dssp EEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEEEE
T ss_pred eEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCceeEE
Confidence 3445568999999999999976 6789999998643 3445678999999999999999999999998766434444799
Q ss_pred EEEeccCCCCCCC-cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCC
Q 041479 601 VYEFMHHGSLESC-PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSS 679 (771)
Q Consensus 601 v~e~~~~g~L~~~-~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 679 (771)
||||+++++|.++ ...+++.++..++.|++.||+|||+. +|+||||||+|||++.+ .+||+|||+++.....
T Consensus 162 v~E~~~g~~L~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~~--- 234 (681)
T 2pzi_A 162 VMEYVGGQSLKRSKGQKLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLGAVSRINSF--- 234 (681)
T ss_dssp EEECCCCEECC----CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCTTCEETTCC---
T ss_pred EEEeCCCCcHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEecccchhcccC---
Confidence 9999999999877 44789999999999999999999996 89999999999999975 8999999999865432
Q ss_pred cccccccccccccccchh--------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCcccccc
Q 041479 680 NQCSSVGLKGTVGYATPE--------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFLVG 745 (771)
Q Consensus 680 ~~~~~~~~~gt~~y~aPE--------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 745 (771)
....||+.|+||| |||++|||++|..|+.+.+..... ........++.+..+
T Consensus 235 -----~~~~gt~~y~aPE~~~~~~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~~---------~~~~~~~~~~~l~~l 300 (681)
T 2pzi_A 235 -----GYLYGTPGFQAPEIVRTGPTVATDIYTVGRTLAALTLDLPTRNGRYVDGLP---------EDDPVLKTYDSYGRL 300 (681)
T ss_dssp -----SCCCCCTTTSCTTHHHHCSCHHHHHHHHHHHHHHHHSCCCEETTEECSSCC---------TTCHHHHHCHHHHHH
T ss_pred -----CccCCCccccCHHHHcCCCCCceehhhhHHHHHHHHhCCCCCccccccccc---------ccccccccCHHHHHH
Confidence 2346999999999 799999999999988764433221 011111123444456
Q ss_pred CcccChhchhhcCC-HHHHHHHHHHh
Q 041479 746 GVQEGEETAEENIK-KGQIRESLIAI 770 (771)
Q Consensus 746 ~~~cl~~~p~~Rpt-~~~vl~~L~~~ 770 (771)
..+||+.||++||+ +.++.+.|.++
T Consensus 301 i~~~l~~dP~~R~~~~~~l~~~l~~~ 326 (681)
T 2pzi_A 301 LRRAIDPDPRQRFTTAEEMSAQLTGV 326 (681)
T ss_dssp HHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred HhhhccCChhhCCCHHHHHHHHHHHH
Confidence 66999999999995 56666666543
No 294
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=99.97 E-value=2.1e-30 Score=283.50 Aligned_cols=177 Identities=24% Similarity=0.313 Sum_probs=147.3
Q ss_pred cccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccC-CC-----CceeEEEEeecCCCCCcee
Q 041479 524 LLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIR-HR-----NLVKIITACSTSDFQGNYF 597 (771)
Q Consensus 524 ~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-H~-----nIv~l~~~~~~~~~~~~~~ 597 (771)
.....+|+|.+|+||+|+++.+++.||||++... ....+++.+|+++++.++ |+ +|+++++++...+ .
T Consensus 57 ~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~-----~ 130 (382)
T 2vx3_A 57 EIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRN-----H 130 (382)
T ss_dssp EEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETT-----E
T ss_pred EEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCC-----c
Confidence 3445689999999999999999999999999643 334567888999998885 55 4999999998776 7
Q ss_pred EEEEEEeccCCCCCCC-----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeC--CCCceEEecccCc
Q 041479 598 RALVYEFMHHGSLESC-----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD--NDMTAHMGDFGLT 670 (771)
Q Consensus 598 ~~lv~e~~~~g~L~~~-----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~--~~~~~kl~DfGla 670 (771)
.|+||||++ |+|.++ ...+++..+..++.|++.||+|||++ ..+|+||||||+|||++ .++.+||+|||+|
T Consensus 131 ~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a 208 (382)
T 2vx3_A 131 LCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDFGSS 208 (382)
T ss_dssp EEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCCTTC
T ss_pred eEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEeccCc
Confidence 899999996 487665 24588999999999999999999953 35899999999999994 4788999999999
Q ss_pred cccCcccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCcc
Q 041479 671 RFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDM 715 (771)
Q Consensus 671 ~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~ 715 (771)
+...... ....||+.|+||| +||++|||++|+.||.+.
T Consensus 209 ~~~~~~~-------~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~ 261 (382)
T 2vx3_A 209 CQLGQRI-------YQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGA 261 (382)
T ss_dssp EETTCCC-------CSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred eeccccc-------ccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 8654321 2346899999999 699999999999999753
No 295
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=99.97 E-value=5.7e-31 Score=292.68 Aligned_cols=224 Identities=21% Similarity=0.247 Sum_probs=160.4
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhcc-CCCCceeEEEEeecCCCCCceeEEEEEEe
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNI-RHRNLVKIITACSTSDFQGNYFRALVYEF 604 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~~~~lv~e~ 604 (771)
...+|+|.+|+||.+.. .+++.||||++.... .+.+.+|+++++++ +|||||++++++.+.+ ..|+||||
T Consensus 20 ~~~LG~G~~g~V~~~~~-~~g~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~-----~~~lv~E~ 90 (434)
T 2rio_A 20 EKILGYGSSGTVVFQGS-FQGRPVAVKRMLIDF---CDIALMEIKLLTESDDHPNVIRYYCSETTDR-----FLYIALEL 90 (434)
T ss_dssp EEEEEECSTTCEEEEEE-SSSSEEEEEEEEGGG---HHHHHHHHHHHHHHTTSTTBCCEEEEEECSS-----EEEEEECC
T ss_pred cCeEeeCCCeEEEEEEE-ECCeEEEEEEEcHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCC-----eEEEEEec
Confidence 35589999999986544 456699999986532 35678999999986 8999999999987766 78999999
Q ss_pred ccCCCCCCCcc----------cCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCC-------------Cc
Q 041479 605 MHHGSLESCPR----------ILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDND-------------MT 661 (771)
Q Consensus 605 ~~~g~L~~~~~----------~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~-------------~~ 661 (771)
|. |+|.++.. ..++..+..++.|++.||+|||+. +|+||||||+|||++.+ +.
T Consensus 91 ~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~ 166 (434)
T 2rio_A 91 CN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLR 166 (434)
T ss_dssp CS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCSCE
T ss_pred CC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCceE
Confidence 95 68866511 112334578999999999999986 99999999999999754 48
Q ss_pred eEEecccCccccCcccCCcccccccccccccccchh----------------------HHHHHHHHHh-CCCCCCccccC
Q 041479 662 AHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE----------------------YGILLLEIFT-GKRPTSDMFTE 718 (771)
Q Consensus 662 ~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE----------------------~Gv~l~el~t-g~~P~~~~~~~ 718 (771)
+||+|||+++................+||+.|+||| +||++|||++ |+.||.+....
T Consensus 167 ~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~ 246 (434)
T 2rio_A 167 ILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSR 246 (434)
T ss_dssp EEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTH
T ss_pred EEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhh
Confidence 999999999876543322111223457999999999 5999999999 99999764322
Q ss_pred CccHHHHHHhhCC-Cch----hhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 719 GLDLHNFVKMALP-DQI----LQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 719 ~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
...+...... ... ...+++.+.....+||+.||++|||+.++++
T Consensus 247 ---~~~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~ 295 (434)
T 2rio_A 247 ---ESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295 (434)
T ss_dssp ---HHHHHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred ---HHHHhcCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHh
Confidence 1233333222 111 1122344455667999999999999999985
No 296
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.97 E-value=3.9e-31 Score=297.97 Aligned_cols=235 Identities=18% Similarity=0.185 Sum_probs=167.6
Q ss_pred CCCCCEEecccCcCcccCChhhhhCCCCCcEEEeecCcccccCCccccCCCCCCEEEccccccCCCCCcCcccccCCCCC
Q 041479 170 ITSMEYFHVSENQLVGELPPHIGFTLPNVRILLLAGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYL 249 (771)
Q Consensus 170 l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L 249 (771)
+++|++|+|++|.+++ +++..+..+++|++|+|++|.|++..| |..+++|++|+|++|.|+++.+ .++|
T Consensus 33 ~~~L~~L~Ls~n~l~~-~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~--------~~~L 101 (487)
T 3oja_A 33 AWNVKELDLSGNPLSQ-ISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLV--------GPSI 101 (487)
T ss_dssp GGGCCEEECCSSCCCC-CCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEE--------CTTC
T ss_pred CCCccEEEeeCCcCCC-CCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCC--------CCCc
Confidence 3478888888888884 444444478888888888888876555 7888888888888888875432 2678
Q ss_pred cEEEccCccccccCChhhhhcccccceeecccCcCcccCcccccccCCcceEecCCccceeccCcccc-CCCCCCEEEcc
Q 041479 250 EVVSLSVNSLSGTLPNSLANFSSHLRYLYMSANPISGSIPTEIGNLKNLIIIAIEKFILIRNIPISVG-YLLKLQVLSLF 328 (771)
Q Consensus 250 ~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~-~l~~L~~L~Ls 328 (771)
++|++++|.|++..+.. + ++|+.|+|++|.|++..|..|+++++|+.|++++|.+.+.+|..+. .+++|+.|+|+
T Consensus 102 ~~L~L~~N~l~~~~~~~---l-~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls 177 (487)
T 3oja_A 102 ETLHAANNNISRVSCSR---G-QGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQ 177 (487)
T ss_dssp CEEECCSSCCCCEEECC---C-SSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECT
T ss_pred CEEECcCCcCCCCCccc---c-CCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecC
Confidence 88888888887554432 2 3688888888888877777888888888888888888777777775 67888888888
Q ss_pred CCcccccCCcccccccccccccccCccceecCCcccccccce-eeecccCcccCCCCcCCCCCCCCCeEECCCCccc-cc
Q 041479 329 ENNISREIPSSLGNFTFLTELNLCGNSIRGSVPSALGSCHQL-WLDLSHNHLTGPIPLAVGNPKSIPHLDLSKNELS-GE 406 (771)
Q Consensus 329 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~ 406 (771)
+|.|++..+ +..+++|++|+|++|+|++.+| .+..++.| .|+|++|+|++ +|..+..+++|+.|++++|++. +.
T Consensus 178 ~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~ 253 (487)
T 3oja_A 178 YNFIYDVKG--QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGT 253 (487)
T ss_dssp TSCCCEEEC--CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHH
T ss_pred CCccccccc--cccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcc
Confidence 888876532 3357788888888888876444 36677777 77777777774 5666777777777777777776 44
Q ss_pred CCcchhhhhcccccccEEECc
Q 041479 407 IPSSLAWIFGYISIFAKLNLS 427 (771)
Q Consensus 407 ~p~~l~~~~~~l~~L~~L~Ls 427 (771)
+|..+. .++.|+.++++
T Consensus 254 ~~~~~~----~l~~L~~l~~~ 270 (487)
T 3oja_A 254 LRDFFS----KNQRVQTVAKQ 270 (487)
T ss_dssp HHHHHT----TCHHHHHHHHH
T ss_pred hHHHHH----hCCCCcEEecc
Confidence 444332 45555554443
No 297
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=99.96 E-value=2.8e-30 Score=277.42 Aligned_cols=175 Identities=20% Similarity=0.247 Sum_probs=147.1
Q ss_pred ccccccccccccceEEEEEe-cCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCC------CceeEEEEeecCCCCCc
Q 041479 523 LLLNVSYESLVKATVYKGIL-DLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHR------NLVKIITACSTSDFQGN 595 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~-~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~------nIv~l~~~~~~~~~~~~ 595 (771)
+.....+|+|.+|+||+|++ +.+++.||||++... ....+.+.+|+++++.++|+ +|+++++++.+.+
T Consensus 16 y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~---- 90 (339)
T 1z57_A 16 YEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHG---- 90 (339)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETT----
T ss_pred eEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCC----
Confidence 34455689999999999998 567889999999643 33457889999999998765 4999999998776
Q ss_pred eeEEEEEEeccCCCCCCC-----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCC------------
Q 041479 596 YFRALVYEFMHHGSLESC-----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN------------ 658 (771)
Q Consensus 596 ~~~~lv~e~~~~g~L~~~-----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~------------ 658 (771)
..++||||+ +++|.++ ...+++.++..++.|++.||+|||+. +|+||||||+||+++.
T Consensus 91 -~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~~~~ 165 (339)
T 1z57_A 91 -HICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKIK 165 (339)
T ss_dssp -EEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC----
T ss_pred -cEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCCccc
Confidence 789999999 7888665 22578999999999999999999996 9999999999999987
Q ss_pred -------CCceEEecccCccccCcccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCc
Q 041479 659 -------DMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSD 714 (771)
Q Consensus 659 -------~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~ 714 (771)
++.+||+|||+++...... ....||+.|+||| +||++|||++|+.||..
T Consensus 166 ~~~~~~~~~~~kl~Dfg~~~~~~~~~-------~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~ 236 (339)
T 1z57_A 166 RDERTLINPDIKVVDFGSATYDDEHH-------STLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPT 236 (339)
T ss_dssp CEEEEESCCCEEECCCSSCEETTSCC-------CSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred cccccccCCCceEeeCcccccCcccc-------ccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCC
Confidence 6689999999998643321 2346899999999 69999999999999965
No 298
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=2.4e-30 Score=280.02 Aligned_cols=278 Identities=18% Similarity=0.179 Sum_probs=201.5
Q ss_pred CCCCEEecccccCcCCCCccceeeecccccccccCccccCCCCCCEEecccCcCcccCChhhhhCCCCCcEEEeecCccc
Q 041479 130 LKFKGLGLANNYFTGPIPHLNMFQVSVYSLTGSIPIQLLNITSMEYFHVSENQLVGELPPHIGFTLPNVRILLLAGNQFF 209 (771)
Q Consensus 130 ~~L~~L~Ls~N~l~~~lp~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~ 209 (771)
+.....++++|.++ .+|..+. ++|++|++++|+++ .+|...+..+++|++|+|++|+|+
T Consensus 31 ~~~~~c~~~~~~l~------------------~iP~~~~--~~L~~L~l~~n~i~-~~~~~~~~~l~~L~~L~L~~n~l~ 89 (353)
T 2z80_A 31 DRNGICKGSSGSLN------------------SIPSGLT--EAVKSLDLSNNRIT-YISNSDLQRCVNLQALVLTSNGIN 89 (353)
T ss_dssp CTTSEEECCSTTCS------------------SCCTTCC--TTCCEEECTTSCCC-EECTTTTTTCTTCCEEECTTSCCC
T ss_pred CCCeEeeCCCCCcc------------------ccccccc--ccCcEEECCCCcCc-ccCHHHhccCCCCCEEECCCCccC
Confidence 33445666666666 4555443 47888888888887 566644457788888888888888
Q ss_pred ccCCccccCCCCCCEEEccccccCCCCCcCcccccCCCCCcEEEccCccccccCCh--hhhhcccccceeecccC-cCcc
Q 041479 210 GNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSLSGTLPN--SLANFSSHLRYLYMSAN-PISG 286 (771)
Q Consensus 210 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~p~--~~~~l~~~L~~L~Ls~N-~l~~ 286 (771)
+..|..|.++++|++|+|++|+|+++.+..| .++++|++|++++|+++ .+|. .+..+. +|++|++++| .+++
T Consensus 90 ~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~---~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~-~L~~L~l~~n~~~~~ 164 (353)
T 2z80_A 90 TIEEDSFSSLGSLEHLDLSYNYLSNLSSSWF---KPLSSLTFLNLLGNPYK-TLGETSLFSHLT-KLQILRVGNMDTFTK 164 (353)
T ss_dssp EECTTTTTTCTTCCEEECCSSCCSSCCHHHH---TTCTTCSEEECTTCCCS-SSCSSCSCTTCT-TCCEEEEEESSSCCE
T ss_pred ccCHhhcCCCCCCCEEECCCCcCCcCCHhHh---CCCccCCEEECCCCCCc-ccCchhhhccCC-CCcEEECCCCccccc
Confidence 7777778888888888888888876655444 66778888888888887 4554 455554 7888888887 4666
Q ss_pred cCcccccccCCcceEecCCccceeccCccccCCCCCCEEEccCCcccccCCcccccccccccccccCccceecCCccccc
Q 041479 287 SIPTEIGNLKNLIIIAIEKFILIRNIPISVGYLLKLQVLSLFENNISREIPSSLGNFTFLTELNLCGNSIRGSVPSALGS 366 (771)
Q Consensus 287 ~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 366 (771)
..|..|.++++|+.|++++|.+.+..|..+..+++|++|++++|+++...+..+..+++|++|++++|++++..+..+..
T Consensus 165 ~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~ 244 (353)
T 2z80_A 165 IQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELST 244 (353)
T ss_dssp ECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC----
T ss_pred cCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCcccccccccccc
Confidence 66777888888888888888887777888888888888888888886443334456788888888888887655544432
Q ss_pred ---ccce-eeecccCcccC----CCCcCCCCCCCCCeEECCCCcccccCCcchhhhhcccccccEEECcCCCCCCCCCc
Q 041479 367 ---CHQL-WLDLSHNHLTG----PIPLAVGNPKSIPHLDLSKNELSGEIPSSLAWIFGYISIFAKLNLSYNNLDGDVPR 437 (771)
Q Consensus 367 ---l~~l-~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~l~~L~~L~Ls~N~l~~~~p~ 437 (771)
...+ .+++++|.+++ .+|..+..+++|++|+|++|+|+ .+|..+ |..+++|+.|+|++|+++|.+|.
T Consensus 245 ~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~-~i~~~~---~~~l~~L~~L~L~~N~~~~~~~~ 319 (353)
T 2z80_A 245 GETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLK-SVPDGI---FDRLTSLQKIWLHTNPWDCSCPR 319 (353)
T ss_dssp --CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCC-CCCTTT---TTTCTTCCEEECCSSCBCCCHHH
T ss_pred ccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCC-ccCHHH---HhcCCCCCEEEeeCCCccCcCCC
Confidence 2333 56666666654 46777888999999999999999 566542 34889999999999999998874
No 299
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.96 E-value=2.6e-30 Score=270.78 Aligned_cols=222 Identities=10% Similarity=0.016 Sum_probs=169.7
Q ss_pred cccccccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeEEE
Q 041479 524 LLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFRAL 600 (771)
Q Consensus 524 ~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~~l 600 (771)
.....+|+|.+|+||+|++..+++.||||++.... ....+.+.+|+.++++++||||+++++++.+.+ ..|+
T Consensus 34 ~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~-----~~~l 108 (286)
T 3uqc_A 34 RLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRA-----GGLV 108 (286)
T ss_dssp EEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETT-----EEEE
T ss_pred EEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECC-----cEEE
Confidence 34456899999999999999989999999997543 344578999999999999999999999998876 7899
Q ss_pred EEEeccCCCCCCCc-ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCC
Q 041479 601 VYEFMHHGSLESCP-RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSS 679 (771)
Q Consensus 601 v~e~~~~g~L~~~~-~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~ 679 (771)
||||+++++|.++. ......+..+++.|++.||+|||+. +|+||||||+||+++.++.+||+++|.......
T Consensus 109 v~e~~~g~~L~~~l~~~~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~~~~~~~~~---- 181 (286)
T 3uqc_A 109 VAEWIRGGSLQEVADTSPSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYPATMPDANP---- 181 (286)
T ss_dssp EEECCCEEEHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSCCCCTTCCH----
T ss_pred EEEecCCCCHHHHHhcCCChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEeccccCCCCc----
Confidence 99999999998762 2345667899999999999999996 999999999999999999999986653320000
Q ss_pred cccccccccccccccchhHHHHHHHHHhCCCCCCccccCCcc--HHHHHHhhCC--CchhhhcCccccccCcccChhchh
Q 041479 680 NQCSSVGLKGTVGYATPEYGILLLEIFTGKRPTSDMFTEGLD--LHNFVKMALP--DQILQVLDPLFLVGGVQEGEETAE 755 (771)
Q Consensus 680 ~~~~~~~~~gt~~y~aPE~Gv~l~el~tg~~P~~~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~~~~~~~~cl~~~p~ 755 (771)
.+--| -+||++|||+||+.||.+....... ..+......+ ......+++.+.....+||+.||+
T Consensus 182 ---------~~Di~---slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~ 249 (286)
T 3uqc_A 182 ---------QDDIR---GIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAARSVQGDGG 249 (286)
T ss_dssp ---------HHHHH---HHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCHHHHHHHHHHHCTTSS
T ss_pred ---------hhHHH---HHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCHHHHHHHHHHcccCCc
Confidence 00001 1899999999999999754322110 0011111111 122334555666677799999999
Q ss_pred hcCCHHHHHHHHHHh
Q 041479 756 ENIKKGQIRESLIAI 770 (771)
Q Consensus 756 ~Rpt~~~vl~~L~~~ 770 (771)
+| |+.|+++.|+++
T Consensus 250 ~R-s~~el~~~L~~~ 263 (286)
T 3uqc_A 250 IR-SASTLLNLMQQA 263 (286)
T ss_dssp CC-CHHHHHHHHHHH
T ss_pred cC-CHHHHHHHHHHH
Confidence 99 999999999875
No 300
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=4e-29 Score=278.79 Aligned_cols=254 Identities=21% Similarity=0.233 Sum_probs=220.8
Q ss_pred CCCEEecccCcCcccCChhhhhCCCCCcEEEeecCcccccCCccccCCCCCCEEEccccccCCCCCcCcccccCCCCCcE
Q 041479 172 SMEYFHVSENQLVGELPPHIGFTLPNVRILLLAGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEV 251 (771)
Q Consensus 172 ~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~ 251 (771)
....++.+++.++ .+|..+. ++++.|+|++|+|++..+..|.++++|++|+|++|.|+++.+..| .++++|++
T Consensus 44 ~~~~v~c~~~~l~-~iP~~~~---~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~---~~l~~L~~ 116 (440)
T 3zyj_A 44 QFSKVICVRKNLR-EVPDGIS---TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAF---NGLANLNT 116 (440)
T ss_dssp TSCEEECCSCCCS-SCCSCCC---TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGG---TTCSSCCE
T ss_pred CCCEEEeCCCCcC-cCCCCCC---CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhc---cCCccCCE
Confidence 4678899999998 8998765 689999999999998888999999999999999999998877666 77899999
Q ss_pred EEccCccccccCChhhhhcccccceeecccCcCcccCcccccccCCcceEecCCccceeccC-ccccCCCCCCEEEccCC
Q 041479 252 VSLSVNSLSGTLPNSLANFSSHLRYLYMSANPISGSIPTEIGNLKNLIIIAIEKFILIRNIP-ISVGYLLKLQVLSLFEN 330 (771)
Q Consensus 252 L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p-~~~~~l~~L~~L~Ls~N 330 (771)
|+|++|+|++..+..+..+. +|++|+|++|+|++..+..|.++++|+.|++++|+..+.++ ..|..+++|++|+|++|
T Consensus 117 L~L~~n~l~~~~~~~~~~l~-~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n 195 (440)
T 3zyj_A 117 LELFDNRLTTIPNGAFVYLS-KLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMC 195 (440)
T ss_dssp EECCSSCCSSCCTTTSCSCS-SCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTS
T ss_pred EECCCCcCCeeCHhHhhccc-cCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCC
Confidence 99999999954444566665 89999999999998878889999999999999965555554 47889999999999999
Q ss_pred cccccCCcccccccccccccccCccceecCCcccccccce-eeecccCcccCCCCcCCCCCCCCCeEECCCCcccccCCc
Q 041479 331 NISREIPSSLGNFTFLTELNLCGNSIRGSVPSALGSCHQL-WLDLSHNHLTGPIPLAVGNPKSIPHLDLSKNELSGEIPS 409 (771)
Q Consensus 331 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 409 (771)
+++ .+| .+..+++|++|+|++|+|++..|..|..++.| .|+|++|++++..+..|..+++|+.|+|++|+|++..+.
T Consensus 196 ~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~ 273 (440)
T 3zyj_A 196 NLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHD 273 (440)
T ss_dssp CCS-SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECTTSCCCCCCTT
T ss_pred cCc-ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECCCCCCCccChh
Confidence 998 455 58899999999999999999999999999999 899999999999999999999999999999999966665
Q ss_pred chhhhhcccccccEEECcCCCCCCCCCccc
Q 041479 410 SLAWIFGYISIFAKLNLSYNNLDGDVPRKM 439 (771)
Q Consensus 410 ~l~~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 439 (771)
.+ ..+++|+.|+|++|++.|.+.-.+
T Consensus 274 ~~----~~l~~L~~L~L~~Np~~CdC~l~~ 299 (440)
T 3zyj_A 274 LF----TPLHHLERIHLHHNPWNCNCDILW 299 (440)
T ss_dssp TT----SSCTTCCEEECCSSCEECSSTTHH
T ss_pred Hh----ccccCCCEEEcCCCCccCCCCchH
Confidence 54 488999999999999998886544
No 301
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=3.6e-29 Score=280.09 Aligned_cols=252 Identities=21% Similarity=0.229 Sum_probs=198.2
Q ss_pred CCEEecccCcCcccCChhhhhCCCCCcEEEeecCcccccCCccccCCCCCCEEEccccccCCCCCcCcccccCCCCCcEE
Q 041479 173 MEYFHVSENQLVGELPPHIGFTLPNVRILLLAGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEVV 252 (771)
Q Consensus 173 L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L 252 (771)
...++.+++.++ .+|..+. +++++|+|++|+|++..|..|.++++|+.|+|++|+|+++.|..| .++++|++|
T Consensus 56 ~~~v~c~~~~l~-~iP~~~~---~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~---~~l~~L~~L 128 (452)
T 3zyi_A 56 FSKVVCTRRGLS-EVPQGIP---SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAF---NGLASLNTL 128 (452)
T ss_dssp SCEEECCSSCCS-SCCSCCC---TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTT---TTCTTCCEE
T ss_pred CcEEEECCCCcC-ccCCCCC---CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhc---cCcccCCEE
Confidence 456777777887 7776544 578888888888888778888888888888888888887777666 677888888
Q ss_pred EccCccccccCChhhhhcccccceeecccCcCcccCcccccccCCcceEecCCccceeccC-ccccCCCCCCEEEccCCc
Q 041479 253 SLSVNSLSGTLPNSLANFSSHLRYLYMSANPISGSIPTEIGNLKNLIIIAIEKFILIRNIP-ISVGYLLKLQVLSLFENN 331 (771)
Q Consensus 253 ~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p-~~~~~l~~L~~L~Ls~N~ 331 (771)
+|++|+|++..+..+..+. +|++|+|++|+|++..+..|.++++|+.|++++|+..+.++ ..|..+++|++|+|++|+
T Consensus 129 ~L~~n~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~ 207 (452)
T 3zyi_A 129 ELFDNWLTVIPSGAFEYLS-KLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCN 207 (452)
T ss_dssp ECCSSCCSBCCTTTSSSCT-TCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSC
T ss_pred ECCCCcCCccChhhhcccC-CCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCc
Confidence 8888888844444455554 78888888888887777788888888888888855444444 467888888888888888
Q ss_pred ccccCCcccccccccccccccCccceecCCcccccccce-eeecccCcccCCCCcCCCCCCCCCeEECCCCcccccCCcc
Q 041479 332 ISREIPSSLGNFTFLTELNLCGNSIRGSVPSALGSCHQL-WLDLSHNHLTGPIPLAVGNPKSIPHLDLSKNELSGEIPSS 410 (771)
Q Consensus 332 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 410 (771)
+++ +| .+..+++|++|+|++|+|++..|..|..++.| .|+|++|++++..|..|..+++|+.|+|++|+|++..+..
T Consensus 208 l~~-~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 285 (452)
T 3zyi_A 208 IKD-MP-NLTPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDL 285 (452)
T ss_dssp CSS-CC-CCTTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTS
T ss_pred ccc-cc-cccccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHH
Confidence 874 34 57788888888888888888888888888888 8888888888888888888888999999999888655554
Q ss_pred hhhhhcccccccEEECcCCCCCCCCCcc
Q 041479 411 LAWIFGYISIFAKLNLSYNNLDGDVPRK 438 (771)
Q Consensus 411 l~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 438 (771)
+. .+++|+.|+|++|++.|.+.-.
T Consensus 286 ~~----~l~~L~~L~L~~Np~~CdC~~~ 309 (452)
T 3zyi_A 286 FT----PLRYLVELHLHHNPWNCDCDIL 309 (452)
T ss_dssp ST----TCTTCCEEECCSSCEECSTTTH
T ss_pred hc----cccCCCEEEccCCCcCCCCCch
Confidence 43 7888888999999888877654
No 302
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=99.96 E-value=1.6e-30 Score=288.17 Aligned_cols=224 Identities=21% Similarity=0.216 Sum_probs=159.1
Q ss_pred ccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhcc-CCCCceeEEEEeecCCCCCceeEEEEEE
Q 041479 525 LNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNI-RHRNLVKIITACSTSDFQGNYFRALVYE 603 (771)
Q Consensus 525 ~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~~~~lv~e 603 (771)
....+|+|.+|+||.... .+++.||||++..... ..+.+|+++++++ +|||||++++++.+.. ..|+|||
T Consensus 28 ~~~~LG~G~~G~V~~~~~-~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~-----~~~lv~E 98 (432)
T 3p23_A 28 PKDVLGHGAEGTIVYRGM-FDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDRQ-----FQYIAIE 98 (432)
T ss_dssp EEEEEEECGGGCEEEEEE-SSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEETT-----EEEEEEE
T ss_pred cCCeeecCcCEEEEEEEE-eCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecCC-----EEEEEEE
Confidence 345689999999654333 3456999999964332 2356899999999 7999999999988776 7899999
Q ss_pred eccCCCCCCC----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCC-----CCceEEecccCccccC
Q 041479 604 FMHHGSLESC----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN-----DMTAHMGDFGLTRFIP 674 (771)
Q Consensus 604 ~~~~g~L~~~----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~-----~~~~kl~DfGla~~~~ 674 (771)
||. |+|.++ .....+.++..++.|++.||+|||+. +|+||||||+||+++. ..++||+|||+|+...
T Consensus 99 ~~~-g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~ 174 (432)
T 3p23_A 99 LCA-ATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLA 174 (432)
T ss_dssp CCS-EEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-
T ss_pred CCC-CCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEecccceeecc
Confidence 996 577655 22344556789999999999999996 8999999999999943 3468899999998765
Q ss_pred cccCCcccccccccccccccchh------------------HHHHHHHHHh-CCCCCCccccCCccHHHHHHhhCCC---
Q 041479 675 EVMSSNQCSSVGLKGTVGYATPE------------------YGILLLEIFT-GKRPTSDMFTEGLDLHNFVKMALPD--- 732 (771)
Q Consensus 675 ~~~~~~~~~~~~~~gt~~y~aPE------------------~Gv~l~el~t-g~~P~~~~~~~~~~~~~~~~~~~~~--- 732 (771)
..... .......+||+.|+||| +||++|||++ |..||.+... ............
T Consensus 175 ~~~~~-~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~---~~~~~~~~~~~~~~~ 250 (432)
T 3p23_A 175 VGRHS-FSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQ---RQANILLGACSLDCL 250 (432)
T ss_dssp ------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTT---HHHHHHTTCCCCTTS
T ss_pred CCCcc-eeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhH---HHHHHHhccCCcccc
Confidence 43211 12233467999999999 6999999999 9999864321 112222221111
Q ss_pred chhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 733 QILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 733 ~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
......++.+.....+||+.||++|||+.|+++
T Consensus 251 ~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 251 HPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp CTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 111222333445666999999999999999984
No 303
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=99.96 E-value=1e-29 Score=274.97 Aligned_cols=175 Identities=19% Similarity=0.255 Sum_probs=145.5
Q ss_pred ccccccccccccceEEEEEecCCC-eEEEEEEeeccchhhHHHHHHHHHHHhccCCCC------ceeEEEEeecCCCCCc
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQ-TFIAVKVLFLHQRGALKSFMAECQALRNIRHRN------LVKIITACSTSDFQGN 595 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~-~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~n------Iv~l~~~~~~~~~~~~ 595 (771)
+.....+|+|.+|+||+|++..++ +.||||++... ....+.+.+|++++++++|++ ++.+++++...+
T Consensus 21 y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~---- 95 (355)
T 2eu9_A 21 YEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHG---- 95 (355)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETT----
T ss_pred EEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCC----
Confidence 334556899999999999997665 79999999643 344578889999999997766 999999988776
Q ss_pred eeEEEEEEeccCCCCCCC-----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeee--------------
Q 041479 596 YFRALVYEFMHHGSLESC-----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLL-------------- 656 (771)
Q Consensus 596 ~~~~lv~e~~~~g~L~~~-----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl-------------- 656 (771)
..++||||+. |++.+. ...+++.++..++.|++.||+|||+. +|+||||||+||++
T Consensus 96 -~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~~ 170 (355)
T 2eu9_A 96 -HMCIAFELLG-KNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHKS 170 (355)
T ss_dssp -EEEEEEECCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECCC-C
T ss_pred -eEEEEEeccC-CChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeccccccccccccc
Confidence 7899999994 555433 23589999999999999999999985 99999999999999
Q ss_pred -----CCCCceEEecccCccccCcccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCc
Q 041479 657 -----DNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSD 714 (771)
Q Consensus 657 -----~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~ 714 (771)
+.++.+||+|||+++...... ....||+.|+||| +||++|||++|+.||..
T Consensus 171 ~~~~~~~~~~~kl~Dfg~~~~~~~~~-------~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~ 241 (355)
T 2eu9_A 171 CEEKSVKNTSIRVADFGSATFDHEHH-------TTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQT 241 (355)
T ss_dssp CCEEEESCCCEEECCCTTCEETTSCC-------CSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred ccccccCCCcEEEeecCccccccccc-------cCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCC
Confidence 567899999999998643321 2346899999999 69999999999999975
No 304
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.96 E-value=1e-28 Score=276.39 Aligned_cols=244 Identities=18% Similarity=0.181 Sum_probs=142.7
Q ss_pred EEcCCCCCcccCCccccCCCCCcEEEcCCCcccccCCccccCCCCCCEEecccCcCcccCCcccccCCcccccCCccccC
Q 041479 49 LNLSGQNLTGTASPYIGNLTFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNALQGQIPDSRLILNKLEGNIPSELGS 128 (771)
Q Consensus 49 L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~l~~n~l~~~~p~~~~~ 128 (771)
++.++++++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+++ +..|..|.+
T Consensus 59 v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~--------------~~~~~~~~~ 121 (452)
T 3zyi_A 59 VVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIR--------------QIEVGAFNG 121 (452)
T ss_dssp EECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC--------------EECTTTTTT
T ss_pred EEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccC--------------CcChhhccC
Confidence 444555565 3444332 56777777777777766777777777777777777644 344455666
Q ss_pred CCCCCEEecccccCcCCCCccceeeecccccccccCccccCCCCCCEEecccCcCcccCChhhhhCCCCCcEEEeec-Cc
Q 041479 129 LLKFKGLGLANNYFTGPIPHLNMFQVSVYSLTGSIPIQLLNITSMEYFHVSENQLVGELPPHIGFTLPNVRILLLAG-NQ 207 (771)
Q Consensus 129 l~~L~~L~Ls~N~l~~~lp~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~-N~ 207 (771)
+++|++|+|++|+|++ ..+..|.++++|++|+|++|+++ .+|...+..+++|+.|++++ |.
T Consensus 122 l~~L~~L~L~~n~l~~-----------------~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~l~~~~~ 183 (452)
T 3zyi_A 122 LASLNTLELFDNWLTV-----------------IPSGAFEYLSKLRELWLRNNPIE-SIPSYAFNRVPSLMRLDLGELKK 183 (452)
T ss_dssp CTTCCEEECCSSCCSB-----------------CCTTTSSSCTTCCEEECCSCCCC-EECTTTTTTCTTCCEEECCCCTT
T ss_pred cccCCEEECCCCcCCc-----------------cChhhhcccCCCCEEECCCCCcc-eeCHhHHhcCCcccEEeCCCCCC
Confidence 6666666666665541 22233455555555555555555 44444444555555555555 33
Q ss_pred ccccCCccccCCCCCCEEEccccccCCCCCcCcccccCCCCCcEEEccCccccccCChhhhhcccccceeecccCcCccc
Q 041479 208 FFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSLSGTLPNSLANFSSHLRYLYMSANPISGS 287 (771)
Q Consensus 208 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~ 287 (771)
+..+.+..|.++++|++|+|++|+|+++ | . +..++ +|++|+|++|+|++.
T Consensus 184 l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~-~---~~~l~-------------------------~L~~L~Ls~N~l~~~ 233 (452)
T 3zyi_A 184 LEYISEGAFEGLFNLKYLNLGMCNIKDM-P-N---LTPLV-------------------------GLEELEMSGNHFPEI 233 (452)
T ss_dssp CCEECTTTTTTCTTCCEEECTTSCCSSC-C-C---CTTCT-------------------------TCCEEECTTSCCSEE
T ss_pred ccccChhhccCCCCCCEEECCCCccccc-c-c---ccccc-------------------------cccEEECcCCcCccc
Confidence 4333333455555555555555555432 1 1 13334 455555555555555
Q ss_pred CcccccccCCcceEecCCccceeccCccccCCCCCCEEEccCCcccccCCcccccccccccccccCccce
Q 041479 288 IPTEIGNLKNLIIIAIEKFILIRNIPISVGYLLKLQVLSLFENNISREIPSSLGNFTFLTELNLCGNSIR 357 (771)
Q Consensus 288 ~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 357 (771)
.|..|.++++|+.|++++|.+.+..|..|..+++|+.|+|++|+|++..+..|..+++|+.|+|++|.+.
T Consensus 234 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 303 (452)
T 3zyi_A 234 RPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPWN 303 (452)
T ss_dssp CGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCEE
T ss_pred CcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCcC
Confidence 5555555556666666666665555666666777777777777777666666777777777777777775
No 305
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=99.96 E-value=4.2e-30 Score=280.18 Aligned_cols=180 Identities=21% Similarity=0.294 Sum_probs=147.5
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccC-----------CCCceeEEEEeecCC
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIR-----------HRNLVKIITACSTSD 591 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-----------H~nIv~l~~~~~~~~ 591 (771)
+.....+|+|.+|+||+|++..+++.||||++... ....+.+.+|++++++++ ||||+++++++...+
T Consensus 21 y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~ 99 (373)
T 1q8y_A 21 YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKG 99 (373)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEE
T ss_pred EEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhccC
Confidence 44456789999999999999999999999999643 334577889999999886 899999999987543
Q ss_pred CCCceeEEEEEEeccCCCCCCC-----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeC------CCC
Q 041479 592 FQGNYFRALVYEFMHHGSLESC-----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLD------NDM 660 (771)
Q Consensus 592 ~~~~~~~~lv~e~~~~g~L~~~-----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~------~~~ 660 (771)
......++||||+ +++|.++ ...+++..+..++.|++.||+|||+. .+|+||||||+||+++ ..+
T Consensus 100 -~~~~~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~--~~ivH~Dikp~NIll~~~~~~~~~~ 175 (373)
T 1q8y_A 100 -PNGVHVVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRR--CGIIHTDIKPENVLMEIVDSPENLI 175 (373)
T ss_dssp -TTEEEEEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHT--TCEECSCCSGGGEEEEEEETTTTEE
T ss_pred -CCCceEEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhc--CCEEecCCChHHeEEeccCCCcCcc
Confidence 1223679999999 8888765 23488999999999999999999984 2899999999999994 445
Q ss_pred ceEEecccCccccCcccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCc
Q 041479 661 TAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSD 714 (771)
Q Consensus 661 ~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~ 714 (771)
.+||+|||+++...... ....||+.|+||| +||++|||++|+.||..
T Consensus 176 ~~kl~Dfg~a~~~~~~~-------~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~ 237 (373)
T 1q8y_A 176 QIKIADLGNACWYDEHY-------TNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEP 237 (373)
T ss_dssp EEEECCCTTCEETTBCC-------CSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC--
T ss_pred eEEEcccccccccCCCC-------CCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCC
Confidence 89999999998654322 2346899999999 69999999999999974
No 306
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.96 E-value=1.7e-30 Score=296.96 Aligned_cols=231 Identities=21% Similarity=0.194 Sum_probs=172.2
Q ss_pred ccccccccccccccceEEEEEecCCCeEEEEEEeecc-chhhHHHHHHHHHHHhccCCCCceeEEEEeecCC-CCCceeE
Q 041479 521 KDLLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLH-QRGALKSFMAECQALRNIRHRNLVKIITACSTSD-FQGNYFR 598 (771)
Q Consensus 521 ~~~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~-~~~~~~~ 598 (771)
..+.....+|+|.+|+||+|++..+++.||||++... .....+++.+|++++++++|||||++++++.... .......
T Consensus 14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~ 93 (676)
T 3qa8_A 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP 93 (676)
T ss_dssp ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence 3445566789999999999999988889999998654 3445678999999999999999999999976521 1112366
Q ss_pred EEEEEeccCCCCCCCc------ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCc---eEEecccC
Q 041479 599 ALVYEFMHHGSLESCP------RILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMT---AHMGDFGL 669 (771)
Q Consensus 599 ~lv~e~~~~g~L~~~~------~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~---~kl~DfGl 669 (771)
|+||||+++|+|.++. ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+|||+
T Consensus 94 ~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~DFG~ 170 (676)
T 3qa8_A 94 LLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGY 170 (676)
T ss_dssp CCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECSCCC
T ss_pred EEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEccccc
Confidence 8999999999997661 2588899999999999999999996 9999999999999987664 99999999
Q ss_pred ccccCcccCCcccccccccccccccchh---------------HHHHHHHHHhCCCCCCccccCCccHHHHH--------
Q 041479 670 TRFIPEVMSSNQCSSVGLKGTVGYATPE---------------YGILLLEIFTGKRPTSDMFTEGLDLHNFV-------- 726 (771)
Q Consensus 670 a~~~~~~~~~~~~~~~~~~gt~~y~aPE---------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~-------- 726 (771)
++....... .....||+.|+||| +||++||+++|+.||...+. ...|.
T Consensus 171 a~~~~~~~~-----~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~~Pf~~~~~----~~~~~~~i~~~~~ 241 (676)
T 3qa8_A 171 AKELDQGEL-----CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLPNWQ----PVQWHGKVREKSN 241 (676)
T ss_dssp CCBTTSCCC-----CCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSCSSCCSSCH----HHHSSTTCC----
T ss_pred ccccccccc-----cccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCCCCCCcccc----hhhhhhhhhcccc
Confidence 987654321 22356899999999 79999999999999964211 00100
Q ss_pred ---------Hhh--------CCCchhhhcCccccccCcccChhchhhcCCHHHH
Q 041479 727 ---------KMA--------LPDQILQVLDPLFLVGGVQEGEETAEENIKKGQI 763 (771)
Q Consensus 727 ---------~~~--------~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~v 763 (771)
.+. .+......+++.+.....+||..||++|||+.++
T Consensus 242 ~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~el 295 (676)
T 3qa8_A 242 EHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQN 295 (676)
T ss_dssp --CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTC
T ss_pred hhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHH
Confidence 000 0111222233444455669999999999999874
No 307
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=6.1e-29 Score=260.50 Aligned_cols=253 Identities=19% Similarity=0.171 Sum_probs=188.8
Q ss_pred CEEecccCcCcccCChhhhhCCCCCcEEEeecCcccccCCccccCCCCCCEEEccccccCCCCCcCcccccCCCCCcEEE
Q 041479 174 EYFHVSENQLVGELPPHIGFTLPNVRILLLAGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEVVS 253 (771)
Q Consensus 174 ~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~ 253 (771)
+.++.+++.++ .+|..+ .++|+.|++++|+|++..+..|..+++|++|+|++|.++++.|..| .++++|++|+
T Consensus 14 ~~~~c~~~~l~-~ip~~~---~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~---~~l~~L~~L~ 86 (285)
T 1ozn_A 14 VTTSCPQQGLQ-AVPVGI---PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAF---TGLALLEQLD 86 (285)
T ss_dssp CEEECCSSCCS-SCCTTC---CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTT---TTCTTCCEEE
T ss_pred eEEEcCcCCcc-cCCcCC---CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhc---CCccCCCEEe
Confidence 67888888888 788654 3688888999988888777888888889999998888888777666 6778888888
Q ss_pred ccCcc-ccccCChhhhhcccccceeecccCcCcccCcccccccCCcceEecCCccceeccCccccCCCCCCEEEccCCcc
Q 041479 254 LSVNS-LSGTLPNSLANFSSHLRYLYMSANPISGSIPTEIGNLKNLIIIAIEKFILIRNIPISVGYLLKLQVLSLFENNI 332 (771)
Q Consensus 254 Ls~N~-l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l 332 (771)
+++|. ++...|..+..+. +|++|++++|.+++..|..|.++++|+.|++++|.+.+..+..+..+++|++|+|++|++
T Consensus 87 l~~n~~l~~~~~~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 165 (285)
T 1ozn_A 87 LSDNAQLRSVDPATFHGLG-RLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRI 165 (285)
T ss_dssp CCSCTTCCCCCTTTTTTCT-TCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCC
T ss_pred CCCCCCccccCHHHhcCCc-CCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcc
Confidence 88887 7644466666665 788888888888877777788888888888888887766666677788888888888888
Q ss_pred cccCCcccccccccccccccCccceecCCcccccccce-eeecccCcccCCCCcCCCCCCCCCeEECCCCcccccCCcch
Q 041479 333 SREIPSSLGNFTFLTELNLCGNSIRGSVPSALGSCHQL-WLDLSHNHLTGPIPLAVGNPKSIPHLDLSKNELSGEIPSSL 411 (771)
Q Consensus 333 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l 411 (771)
++..+..|..+++|++|++++|++++..|..+..++.| .|++++|++++..+..|..+++|+.|+|++|++....+..
T Consensus 166 ~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~- 244 (285)
T 1ozn_A 166 SSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRAR- 244 (285)
T ss_dssp CEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGGH-
T ss_pred cccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCcH-
Confidence 76666677888888888888888887777777777777 6777777777666666777777777777777776433321
Q ss_pred hhhhcccccccEEECcCCCCCCCCCccc
Q 041479 412 AWIFGYISIFAKLNLSYNNLDGDVPRKM 439 (771)
Q Consensus 412 ~~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 439 (771)
+. ...++.+..+.|.+.|..|..+
T Consensus 245 -~~---~~~l~~~~~~~~~~~c~~p~~l 268 (285)
T 1ozn_A 245 -PL---WAWLQKFRGSSSEVPCSLPQRL 268 (285)
T ss_dssp -HH---HHHHHHCCSEECCCBEEESGGG
T ss_pred -HH---HHHHHhcccccCccccCCchHh
Confidence 11 1223444566677776666643
No 308
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.96 E-value=5.4e-30 Score=272.74 Aligned_cols=270 Identities=17% Similarity=0.206 Sum_probs=208.3
Q ss_pred CcEEEEEcCCCCCcccCCccccCCCCCcEEEcCCCcccccCCccccCCCCCCEEecccCcCcccCCcccccCCcccccCC
Q 041479 44 QRVILLNLSGQNLTGTASPYIGNLTFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNALQGQIPDSRLILNKLEGNIP 123 (771)
Q Consensus 44 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~l~~n~l~~~~p 123 (771)
.++..++++.+++...+...+..+++|++|+|++|+|++..|..|+.+++|++|+|++|++++ ..|
T Consensus 10 ~~l~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~--------------~~~ 75 (317)
T 3o53_A 10 NRYKIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYE--------------TLD 75 (317)
T ss_dssp TEEEEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEE--------------EEE
T ss_pred CceeEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCc--------------chh
Confidence 567888999999987777777888999999999999998778899999999999999999752 222
Q ss_pred ccccCCCCCCEEecccccCcCCCCccceeeecccccccccCccccCCCCCCEEecccCcCcccCChhhhhCCCCCcEEEe
Q 041479 124 SELGSLLKFKGLGLANNYFTGPIPHLNMFQVSVYSLTGSIPIQLLNITSMEYFHVSENQLVGELPPHIGFTLPNVRILLL 203 (771)
Q Consensus 124 ~~~~~l~~L~~L~Ls~N~l~~~lp~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L 203 (771)
|..+++|++|++++|+|++ ++ ..++|++|++++|+++ .++.. .+++|+.|++
T Consensus 76 --~~~l~~L~~L~Ls~n~l~~------------------l~----~~~~L~~L~l~~n~l~-~~~~~---~~~~L~~L~l 127 (317)
T 3o53_A 76 --LESLSTLRTLDLNNNYVQE------------------LL----VGPSIETLHAANNNIS-RVSCS---RGQGKKNIYL 127 (317)
T ss_dssp --ETTCTTCCEEECCSSEEEE------------------EE----ECTTCCEEECCSSCCS-EEEEC---CCSSCEEEEC
T ss_pred --hhhcCCCCEEECcCCcccc------------------cc----CCCCcCEEECCCCccC-CcCcc---ccCCCCEEEC
Confidence 7889999999999998872 11 2378888888888888 44433 4578888888
Q ss_pred ecCcccccCCccccCCCCCCEEEccccccCCCCCcCcccccCCCCCcEEEccCccccccCChhhhhcccccceeecccCc
Q 041479 204 AGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSLSGTLPNSLANFSSHLRYLYMSANP 283 (771)
Q Consensus 204 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~ 283 (771)
++|+|++..+..|..+++|++|+|++|.+++..|..+. ..+++|++|+|++|.+++. |... .+ ++|++|++++|+
T Consensus 128 ~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~--~~l~~L~~L~L~~N~l~~~-~~~~-~l-~~L~~L~Ls~N~ 202 (317)
T 3o53_A 128 ANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELA--ASSDTLEHLNLQYNFIYDV-KGQV-VF-AKLKTLDLSSNK 202 (317)
T ss_dssp CSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGG--GGTTTCCEEECTTSCCCEE-ECCC-CC-TTCCEEECCSSC
T ss_pred CCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHh--hccCcCCEEECCCCcCccc-cccc-cc-ccCCEEECCCCc
Confidence 88888887777888888888888888888877665541 3568888888888888743 3322 23 378888888888
Q ss_pred CcccCcccccccCCcceEecCCccceeccCccccCCCCCCEEEccCCccc-ccCCcccccccccccccccC-ccceecCC
Q 041479 284 ISGSIPTEIGNLKNLIIIAIEKFILIRNIPISVGYLLKLQVLSLFENNIS-REIPSSLGNFTFLTELNLCG-NSIRGSVP 361 (771)
Q Consensus 284 l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p 361 (771)
|++. |..|..+++|+.|++++|.+. .+|..+..+++|+.|++++|.++ +.+|..+..+++|+.|++++ +.+++..|
T Consensus 203 l~~l-~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~~~~ 280 (317)
T 3o53_A 203 LAFM-GPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNE 280 (317)
T ss_dssp CCEE-CGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHSSSS
T ss_pred CCcc-hhhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccCCch
Confidence 8854 445778888888888888776 45667777788888888888887 66677777788888888874 44554444
Q ss_pred c
Q 041479 362 S 362 (771)
Q Consensus 362 ~ 362 (771)
.
T Consensus 281 ~ 281 (317)
T 3o53_A 281 E 281 (317)
T ss_dssp C
T ss_pred h
Confidence 3
No 309
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.96 E-value=1.4e-28 Score=257.74 Aligned_cols=224 Identities=18% Similarity=0.201 Sum_probs=157.3
Q ss_pred EEEEcCCCCCcccCCccccCCCCCcEEEcCCCcccccCCccccCCCCCCEEecccCcCcccCCcccccCCcccccCCccc
Q 041479 47 ILLNLSGQNLTGTASPYIGNLTFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNALQGQIPDSRLILNKLEGNIPSEL 126 (771)
Q Consensus 47 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~l~~n~l~~~~p~~~ 126 (771)
+.++.++++++.+ |..+ .++|++|+|++|+|++..+..|..+++|++|+|++|.++ +..|..|
T Consensus 14 ~~~~c~~~~l~~i-p~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~--------------~~~~~~~ 76 (285)
T 1ozn_A 14 VTTSCPQQGLQAV-PVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLA--------------RIDAAAF 76 (285)
T ss_dssp CEEECCSSCCSSC-CTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCC--------------EECTTTT
T ss_pred eEEEcCcCCcccC-CcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccc--------------eeCHhhc
Confidence 6778888888844 4433 578999999999999877788999999999999999865 3556778
Q ss_pred cCCCCCCEEeccccc-CcCCCCccceeeecccccccccCccccCCCCCCEEecccCcCcccCChhhhhCCCCCcEEEeec
Q 041479 127 GSLLKFKGLGLANNY-FTGPIPHLNMFQVSVYSLTGSIPIQLLNITSMEYFHVSENQLVGELPPHIGFTLPNVRILLLAG 205 (771)
Q Consensus 127 ~~l~~L~~L~Ls~N~-l~~~lp~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~ 205 (771)
.++++|++|++++|. +++ ..|..+.++++|++|++++|+++ .+++..+..+++|++|++++
T Consensus 77 ~~l~~L~~L~l~~n~~l~~-----------------~~~~~~~~l~~L~~L~l~~n~l~-~~~~~~~~~l~~L~~L~l~~ 138 (285)
T 1ozn_A 77 TGLALLEQLDLSDNAQLRS-----------------VDPATFHGLGRLHTLHLDRCGLQ-ELGPGLFRGLAALQYLYLQD 138 (285)
T ss_dssp TTCTTCCEEECCSCTTCCC-----------------CCTTTTTTCTTCCEEECTTSCCC-CCCTTTTTTCTTCCEEECCS
T ss_pred CCccCCCEEeCCCCCCccc-----------------cCHHHhcCCcCCCEEECCCCcCC-EECHhHhhCCcCCCEEECCC
Confidence 888888888888886 552 23556777777777887777777 44444444677777777777
Q ss_pred CcccccCCccccCCCCCCEEEccccccCCCCCcCcccccCCCCCcEEEccCccccccCChhhhhcccccceeecccCcCc
Q 041479 206 NQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSLSGTLPNSLANFSSHLRYLYMSANPIS 285 (771)
Q Consensus 206 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~ 285 (771)
|++++..+..|..+++|++|+|++|+++++.+..| ..+++|+.|++++|++++..|..+..+. +|+.|++++|+++
T Consensus 139 n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~---~~l~~L~~L~l~~n~l~~~~~~~~~~l~-~L~~L~l~~n~l~ 214 (285)
T 1ozn_A 139 NALQALPDDTFRDLGNLTHLFLHGNRISSVPERAF---RGLHSLDRLLLHQNRVAHVHPHAFRDLG-RLMTLYLFANNLS 214 (285)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTT---TTCTTCCEEECCSSCCCEECTTTTTTCT-TCCEEECCSSCCS
T ss_pred CcccccCHhHhccCCCccEEECCCCcccccCHHHh---cCccccCEEECCCCcccccCHhHccCcc-cccEeeCCCCcCC
Confidence 77776666667777777777777777776555444 5566677777777777655566666554 5666666666666
Q ss_pred ccCcccccccCCcceEecCCccce
Q 041479 286 GSIPTEIGNLKNLIIIAIEKFILI 309 (771)
Q Consensus 286 ~~~p~~~~~l~~L~~L~l~~n~l~ 309 (771)
+..+..|..+++|+.|++++|.+.
T Consensus 215 ~~~~~~~~~l~~L~~L~l~~N~~~ 238 (285)
T 1ozn_A 215 ALPTEALAPLRALQYLRLNDNPWV 238 (285)
T ss_dssp CCCHHHHTTCTTCCEEECCSSCEE
T ss_pred cCCHHHcccCcccCEEeccCCCcc
Confidence 544455555555555555555553
No 310
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.96 E-value=2e-29 Score=266.10 Aligned_cols=215 Identities=16% Similarity=0.190 Sum_probs=161.9
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHH-hccCCCCceeEEEEeecCCCCCceeEEEEEEec
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQAL-RNIRHRNLVKIITACSTSDFQGNYFRALVYEFM 605 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l-~~l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~~ 605 (771)
..+|+|.+|+||+|+++.+++.||||++... ..+.+|++++ +..+||||+++++++.... .+....++||||+
T Consensus 24 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~-~~~~~~~lv~e~~ 97 (299)
T 3m2w_A 24 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLY-AGRKCLLIVMECL 97 (299)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEE-TTEEEEEEEECCC
T ss_pred cccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhc-CCCceEEEEEeec
Confidence 3589999999999999999999999999532 4567888888 5568999999999986521 1123689999999
Q ss_pred cCCCCCCC-----cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCC---CCceEEecccCccccCccc
Q 041479 606 HHGSLESC-----PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDN---DMTAHMGDFGLTRFIPEVM 677 (771)
Q Consensus 606 ~~g~L~~~-----~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~---~~~~kl~DfGla~~~~~~~ 677 (771)
++|+|.++ ...+++.++..++.|++.||+|||+. +|+||||||+||+++. ++.+||+|||+++......
T Consensus 98 ~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~ 174 (299)
T 3m2w_A 98 DGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTGEK 174 (299)
T ss_dssp CSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCTTCEECTTCG
T ss_pred CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEecccccccccccc
Confidence 99999776 23589999999999999999999996 8999999999999998 7899999999997543211
Q ss_pred CCcccccccccccccccch----hHHHHHHHHHhCCCCCCccccCCcc--H-HHHHHh--hCCCchhhhcCccccccCcc
Q 041479 678 SSNQCSSVGLKGTVGYATP----EYGILLLEIFTGKRPTSDMFTEGLD--L-HNFVKM--ALPDQILQVLDPLFLVGGVQ 748 (771)
Q Consensus 678 ~~~~~~~~~~~gt~~y~aP----E~Gv~l~el~tg~~P~~~~~~~~~~--~-~~~~~~--~~~~~~~~~~~~~~~~~~~~ 748 (771)
|... -+||++|||++|+.||.+....... . ...... ..+......+++.+.....+
T Consensus 175 ---------------~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 239 (299)
T 3m2w_A 175 ---------------YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRN 239 (299)
T ss_dssp ---------------GGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTTCCSSCHHHHTTSCHHHHHHHHH
T ss_pred ---------------CCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhccccCCchhcccCCHHHHHHHHH
Confidence 1111 1899999999999999653211100 0 000000 11111223456666667779
Q ss_pred cChhchhhcCCHHHHHH
Q 041479 749 EGEETAEENIKKGQIRE 765 (771)
Q Consensus 749 cl~~~p~~Rpt~~~vl~ 765 (771)
||+.||++|||+.|+++
T Consensus 240 ~l~~dP~~Rps~~e~l~ 256 (299)
T 3m2w_A 240 LLKTEPTQRMTITEFMN 256 (299)
T ss_dssp HTCSSTTTSCCHHHHHT
T ss_pred HcccChhhCCCHHHHhc
Confidence 99999999999999986
No 311
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.96 E-value=8.2e-28 Score=268.11 Aligned_cols=247 Identities=21% Similarity=0.213 Sum_probs=199.8
Q ss_pred CCEEecccccCcCCCCccceeeecccccccccCccccCCCCCCEEecccCcCcccCChhhhhCCCCCcEEEeecCccccc
Q 041479 132 FKGLGLANNYFTGPIPHLNMFQVSVYSLTGSIPIQLLNITSMEYFHVSENQLVGELPPHIGFTLPNVRILLLAGNQFFGN 211 (771)
Q Consensus 132 L~~L~Ls~N~l~~~lp~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~ 211 (771)
...++.+++.++ .+|..+. ++++.|+|++|+++ .++...+..+++|++|+|++|+|+++
T Consensus 45 ~~~v~c~~~~l~------------------~iP~~~~--~~l~~L~L~~n~i~-~~~~~~~~~l~~L~~L~Ls~n~i~~i 103 (440)
T 3zyj_A 45 FSKVICVRKNLR------------------EVPDGIS--TNTRLLNLHENQIQ-IIKVNSFKHLRHLEILQLSRNHIRTI 103 (440)
T ss_dssp SCEEECCSCCCS------------------SCCSCCC--TTCSEEECCSCCCC-EECTTTTSSCSSCCEEECCSSCCCEE
T ss_pred CCEEEeCCCCcC------------------cCCCCCC--CCCcEEEccCCcCC-eeCHHHhhCCCCCCEEECCCCcCCcc
Confidence 456666666666 4555443 57888888888888 45544455888888888888888887
Q ss_pred CCccccCCCCCCEEEccccccCCCCCcCcccccCCCCCcEEEccCccccccCChhhhhcccccceeeccc-CcCcccCcc
Q 041479 212 IPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSLSGTLPNSLANFSSHLRYLYMSA-NPISGSIPT 290 (771)
Q Consensus 212 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~-N~l~~~~p~ 290 (771)
.+..|.++++|++|+|++|+|+.+.+..| ..+++|++|+|++|++++..+..+..+. +|++|++++ |.+....+.
T Consensus 104 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~---~~l~~L~~L~L~~N~i~~~~~~~~~~l~-~L~~L~l~~~~~l~~i~~~ 179 (440)
T 3zyj_A 104 EIGAFNGLANLNTLELFDNRLTTIPNGAF---VYLSKLKELWLRNNPIESIPSYAFNRIP-SLRRLDLGELKRLSYISEG 179 (440)
T ss_dssp CGGGGTTCSSCCEEECCSSCCSSCCTTTS---CSCSSCCEEECCSCCCCEECTTTTTTCT-TCCEEECCCCTTCCEECTT
T ss_pred ChhhccCCccCCEEECCCCcCCeeCHhHh---hccccCceeeCCCCcccccCHHHhhhCc-ccCEeCCCCCCCcceeCcc
Confidence 77888888888888888888887766555 6778888888888888855555566665 788888888 455544555
Q ss_pred cccccCCcceEecCCccceeccCccccCCCCCCEEEccCCcccccCCcccccccccccccccCccceecCCcccccccce
Q 041479 291 EIGNLKNLIIIAIEKFILIRNIPISVGYLLKLQVLSLFENNISREIPSSLGNFTFLTELNLCGNSIRGSVPSALGSCHQL 370 (771)
Q Consensus 291 ~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l 370 (771)
.|.++++|+.|++++|.+.. +| .+..+++|+.|+|++|++++..|..|..+++|+.|+|++|+|++..+..|..++.|
T Consensus 180 ~~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L 257 (440)
T 3zyj_A 180 AFEGLSNLRYLNLAMCNLRE-IP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSL 257 (440)
T ss_dssp TTTTCSSCCEEECTTSCCSS-CC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTC
T ss_pred hhhcccccCeecCCCCcCcc-cc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCC
Confidence 78888888888888888863 44 47888999999999999998889999999999999999999999999999999999
Q ss_pred -eeecccCcccCCCCcCCCCCCCCCeEECCCCcccc
Q 041479 371 -WLDLSHNHLTGPIPLAVGNPKSIPHLDLSKNELSG 405 (771)
Q Consensus 371 -~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 405 (771)
.|+|++|+|++..+..|..+++|+.|+|++|++.-
T Consensus 258 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~C 293 (440)
T 3zyj_A 258 VEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNC 293 (440)
T ss_dssp CEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEEC
T ss_pred CEEECCCCCCCccChhHhccccCCCEEEcCCCCccC
Confidence 89999999998888899999999999999999873
No 312
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=2e-30 Score=275.53 Aligned_cols=254 Identities=19% Similarity=0.214 Sum_probs=189.0
Q ss_pred cccCCCCCcEEEcCCCcccccCCccccCCCCCCEEecccCcCcccCCcccccCCcccccCCcccc-------CCCCCCEE
Q 041479 63 YIGNLTFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNALQGQIPDSRLILNKLEGNIPSELG-------SLLKFKGL 135 (771)
Q Consensus 63 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~l~~n~l~~~~p~~~~-------~l~~L~~L 135 (771)
.++..++|+.|++++|.+ .+|..+... |++|+|++|.++ ...+|..+. ++++|++|
T Consensus 38 ~~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~-------------~~~~~~~~~~~~~~~~~l~~L~~L 100 (312)
T 1wwl_A 38 LYGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVR-------------AARIPSRILFGALRVLGISGLQEL 100 (312)
T ss_dssp EEEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEE-------------EEECBHHHHHHHHHHHTTSCCCEE
T ss_pred EEccCCCceeEeeccccc--ccHHHHHHH--Hhhccccccccc-------------CCCcCHHHHHHHHHhcCcCCccEE
Confidence 345566677777777777 466655544 777777777753 123444443 67777777
Q ss_pred ecccccCcCCCCccceeeecccccccccCccc--cCCCCCCEEecccCcCcccCChhhhhCC-----CCCcEEEeecCcc
Q 041479 136 GLANNYFTGPIPHLNMFQVSVYSLTGSIPIQL--LNITSMEYFHVSENQLVGELPPHIGFTL-----PNVRILLLAGNQF 208 (771)
Q Consensus 136 ~Ls~N~l~~~lp~L~~l~l~~n~l~~~~p~~~--~~l~~L~~L~Ls~N~l~g~lp~~~~~~l-----~~L~~L~L~~N~l 208 (771)
+|++|++++ .+|..+ ..+++|++|+|++|++++ +|..+. .+ ++|++|+|++|+|
T Consensus 101 ~L~~n~l~~-----------------~~~~~~~~~~l~~L~~L~Ls~N~l~~-~~~~~~-~l~~~~~~~L~~L~L~~N~l 161 (312)
T 1wwl_A 101 TLENLEVTG-----------------TAPPPLLEATGPDLNILNLRNVSWAT-RDAWLA-ELQQWLKPGLKVLSIAQAHS 161 (312)
T ss_dssp EEEEEBCBS-----------------CCCCCSSSCCSCCCSEEEEESCBCSS-SSSHHH-HHHTTCCTTCCEEEEESCSC
T ss_pred EccCCcccc-----------------hhHHHHHHhcCCCccEEEccCCCCcc-hhHHHH-HHHHhhcCCCcEEEeeCCCC
Confidence 777777664 444444 678888888888888884 465554 45 8899999999999
Q ss_pred cccCCccccCCCCCCEEEccccccCCCC--CcCcccccCCCCCcEEEccCccccc--cCChhhhhcccccceeecccCcC
Q 041479 209 FGNIPHSISNASKLEWLDFANNSLTGLI--PEDLDSLVNCTYLEVVSLSVNSLSG--TLPNSLANFSSHLRYLYMSANPI 284 (771)
Q Consensus 209 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~--p~~~~~l~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~~L~~L~Ls~N~l 284 (771)
++..|..|..+++|++|+|++|++.+.. |..+ .+..+++|++|+|++|+|++ .++..++...++|++|++++|+|
T Consensus 162 ~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l 240 (312)
T 1wwl_A 162 LNFSCEQVRVFPALSTLDLSDNPELGERGLISAL-CPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSL 240 (312)
T ss_dssp CCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHS-CTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCC
T ss_pred ccchHHHhccCCCCCEEECCCCCcCcchHHHHHH-HhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcC
Confidence 9888889999999999999999876542 2111 12677899999999999982 23333332224799999999999
Q ss_pred cccCc-ccccccCCcceEecCCccceeccCccccCCCCCCEEEccCCcccccCCcccccccccccccccCcccee
Q 041479 285 SGSIP-TEIGNLKNLIIIAIEKFILIRNIPISVGYLLKLQVLSLFENNISREIPSSLGNFTFLTELNLCGNSIRG 358 (771)
Q Consensus 285 ~~~~p-~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 358 (771)
++..| ..+..+++|+.|++++|.+. .+|..+. ++|++|+|++|+|++. |. +..+++|++|+|++|++++
T Consensus 241 ~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 241 RDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp CSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred CcccchhhhhhcCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 98775 56777899999999999987 6777766 8999999999999865 65 8999999999999999975
No 313
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=2.1e-29 Score=268.23 Aligned_cols=263 Identities=18% Similarity=0.181 Sum_probs=208.6
Q ss_pred eeeecccccccccCccccCCCCCCEEecccCcCcccCChhhhhCCCCCcEEEeecCcccccCCccccCCCCCCEEEcccc
Q 041479 151 MFQVSVYSLTGSIPIQLLNITSMEYFHVSENQLVGELPPHIGFTLPNVRILLLAGNQFFGNIPHSISNASKLEWLDFANN 230 (771)
Q Consensus 151 ~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 230 (771)
..+++.+.+....+..+..+++|++|+|++|+++ .+++..+..+++|++|+|++|++++..+ |..+++|++|+|++|
T Consensus 14 i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n 90 (317)
T 3o53_A 14 IEKVTDSSLKQALASLRQSAWNVKELDLSGNPLS-QISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNN 90 (317)
T ss_dssp EESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCC-CCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSS
T ss_pred EeeccccchhhhHHHHhccCCCCCEEECcCCccC-cCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCC
Confidence 4556666665555555667789999999999998 5555545589999999999999987654 889999999999999
Q ss_pred ccCCCCCcCcccccCCCCCcEEEccCccccccCChhhhhcccccceeecccCcCcccCcccccccCCcceEecCCcccee
Q 041479 231 SLTGLIPEDLDSLVNCTYLEVVSLSVNSLSGTLPNSLANFSSHLRYLYMSANPISGSIPTEIGNLKNLIIIAIEKFILIR 310 (771)
Q Consensus 231 ~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~ 310 (771)
+|+++. .+++|++|++++|++++..+.. + ++|++|++++|++++..|..|..+++|+.|++++|.+.+
T Consensus 91 ~l~~l~--------~~~~L~~L~l~~n~l~~~~~~~---~-~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 158 (317)
T 3o53_A 91 YVQELL--------VGPSIETLHAANNNISRVSCSR---G-QGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDT 158 (317)
T ss_dssp EEEEEE--------ECTTCCEEECCSSCCSEEEECC---C-SSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCE
T ss_pred cccccc--------CCCCcCEEECCCCccCCcCccc---c-CCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCc
Confidence 998643 2378999999999998654443 2 379999999999998888889999999999999999988
Q ss_pred ccCcccc-CCCCCCEEEccCCcccccCCcccccccccccccccCccceecCCcccccccce-eeecccCcccCCCCcCCC
Q 041479 311 NIPISVG-YLLKLQVLSLFENNISREIPSSLGNFTFLTELNLCGNSIRGSVPSALGSCHQL-WLDLSHNHLTGPIPLAVG 388 (771)
Q Consensus 311 ~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l-~L~Ls~N~l~~~~p~~~~ 388 (771)
..+..+. .+++|++|+|++|++++. | ....+++|++|+|++|+|++.. ..+..++.| .|++++|+++ .+|..+.
T Consensus 159 ~~~~~~~~~l~~L~~L~L~~N~l~~~-~-~~~~l~~L~~L~Ls~N~l~~l~-~~~~~l~~L~~L~L~~N~l~-~l~~~~~ 234 (317)
T 3o53_A 159 VNFAELAASSDTLEHLNLQYNFIYDV-K-GQVVFAKLKTLDLSSNKLAFMG-PEFQSAAGVTWISLRNNKLV-LIEKALR 234 (317)
T ss_dssp EEGGGGGGGTTTCCEEECTTSCCCEE-E-CCCCCTTCCEEECCSSCCCEEC-GGGGGGTTCSEEECTTSCCC-EECTTCC
T ss_pred ccHHHHhhccCcCCEEECCCCcCccc-c-cccccccCCEEECCCCcCCcch-hhhcccCcccEEECcCCccc-chhhHhh
Confidence 7777764 789999999999999865 3 2335889999999999999654 448888888 8999999998 4677788
Q ss_pred CCCCCCeEECCCCccc-ccCCcchhhhhcccccccEEECcC-CCCCCCCC
Q 041479 389 NPKSIPHLDLSKNELS-GEIPSSLAWIFGYISIFAKLNLSY-NNLDGDVP 436 (771)
Q Consensus 389 ~l~~L~~L~Ls~N~l~-~~~p~~l~~~~~~l~~L~~L~Ls~-N~l~~~~p 436 (771)
.+++|+.|++++|+++ +.+|..+. .+++|+.|++++ +.+++..|
T Consensus 235 ~l~~L~~L~l~~N~~~~~~~~~~~~----~~~~L~~l~l~~~~~l~~~~~ 280 (317)
T 3o53_A 235 FSQNLEHFDLRGNGFHCGTLRDFFS----KNQRVQTVAKQTVKKLTGQNE 280 (317)
T ss_dssp CCTTCCEEECTTCCCBHHHHHHHHH----TCHHHHHHHHHHHHHHHSSSS
T ss_pred cCCCCCEEEccCCCccCcCHHHHHh----ccccceEEECCCchhccCCch
Confidence 8999999999999998 55555544 778888888873 34444433
No 314
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=3.5e-29 Score=265.85 Aligned_cols=246 Identities=21% Similarity=0.211 Sum_probs=140.5
Q ss_pred ccCCCCCCEEecccccCcCCCCc-----cceeeeccccc-ccccCcccc-------CCCCCCEEecccCcCcccCChhhh
Q 041479 126 LGSLLKFKGLGLANNYFTGPIPH-----LNMFQVSVYSL-TGSIPIQLL-------NITSMEYFHVSENQLVGELPPHIG 192 (771)
Q Consensus 126 ~~~l~~L~~L~Ls~N~l~~~lp~-----L~~l~l~~n~l-~~~~p~~~~-------~l~~L~~L~Ls~N~l~g~lp~~~~ 192 (771)
++..++|+.|++++|.+ .+|. ++.++++.|.+ .+.+|..+. ++++|++|+|++|++++.+|..++
T Consensus 39 ~~~~~~L~~l~l~~n~l--~~p~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~ 116 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE--ADLGQFTDIIKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLL 116 (312)
T ss_dssp EEEEEECTTHHHHCCTT--CCCHHHHHHHHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSS
T ss_pred EccCCCceeEeeccccc--ccHHHHHHHHhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHH
Confidence 34455566666666665 2232 33444444444 223343333 455555556655555555555442
Q ss_pred -hCCCCCcEEEeecCcccccCCccccCC-----CCCCEEEccccccCCCCCcCcccccCCCCCcEEEccCcccccc--CC
Q 041479 193 -FTLPNVRILLLAGNQFFGNIPHSISNA-----SKLEWLDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSLSGT--LP 264 (771)
Q Consensus 193 -~~l~~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~--~p 264 (771)
..+++|++|+|++|+|++. |..|..+ ++|++|+|++|+|++..|..| .++++|++|++++|++.+. +|
T Consensus 117 ~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~---~~l~~L~~L~Ls~N~l~~~~~~~ 192 (312)
T 1wwl_A 117 EATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQV---RVFPALSTLDLSDNPELGERGLI 192 (312)
T ss_dssp SCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTC---CCCSSCCEEECCSCTTCHHHHHH
T ss_pred HhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHh---ccCCCCCEEECCCCCcCcchHHH
Confidence 3555555555555555544 5555544 555555555555555544444 4455555555555555433 12
Q ss_pred hhhhhcccccceeecccCcCcccCcccccccCCcceEecCCcccee--ccC-ccccCCCCCCEEEccCCcccccCC-ccc
Q 041479 265 NSLANFSSHLRYLYMSANPISGSIPTEIGNLKNLIIIAIEKFILIR--NIP-ISVGYLLKLQVLSLFENNISREIP-SSL 340 (771)
Q Consensus 265 ~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~--~~p-~~~~~l~~L~~L~Ls~N~l~~~~p-~~~ 340 (771)
..+ .+..+++|+.|++++|.+.+ .++ ..+..+++|++|+|++|++++..| ..+
T Consensus 193 ~~~-----------------------~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 249 (312)
T 1wwl_A 193 SAL-----------------------CPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSC 249 (312)
T ss_dssp HHS-----------------------CTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCC
T ss_pred HHH-----------------------HhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhh
Confidence 222 11444444444444444431 112 233466777777777777776554 455
Q ss_pred ccccccccccccCccceecCCcccccccce-eeecccCcccCCCCcCCCCCCCCCeEECCCCcccc
Q 041479 341 GNFTFLTELNLCGNSIRGSVPSALGSCHQL-WLDLSHNHLTGPIPLAVGNPKSIPHLDLSKNELSG 405 (771)
Q Consensus 341 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 405 (771)
..+++|++|+|++|+|+ .+|..+. +.| .|||++|+|++. |. +..+++|++|+|++|+|++
T Consensus 250 ~~l~~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 250 DWPSQLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp CCCTTCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred hhcCCCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCCC
Confidence 66777888888888877 5566555 566 788888888866 55 7888888888888888874
No 315
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=7.3e-27 Score=268.60 Aligned_cols=263 Identities=25% Similarity=0.356 Sum_probs=182.8
Q ss_pred CCCcEEEcCCCcccccCCccccCCCCCCEEecccCcCcccCCcccccCCcccccCCccccCCCCCCEEecccccCcCCCC
Q 041479 68 TFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNALQGQIPDSRLILNKLEGNIPSELGSLLKFKGLGLANNYFTGPIP 147 (771)
Q Consensus 68 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp 147 (771)
.+++.|++++|.|+ .+|..+. ++|++|+|++|.|+ .+|. .+++|++|+|++|+|+
T Consensus 40 ~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~---------------~lp~---~l~~L~~L~Ls~N~l~---- 94 (622)
T 3g06_A 40 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT---------------SLPA---LPPELRTLEVSGNQLT---- 94 (622)
T ss_dssp HCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS---------------CCCC---CCTTCCEEEECSCCCS----
T ss_pred CCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC---------------CCCC---cCCCCCEEEcCCCcCC----
Confidence 45888999999988 4777665 78888888888865 3343 3566777777777665
Q ss_pred ccceeeecccccccccCccccCCCCCCEEecccCcCcccCChhhhhCCCCCcEEEeecCcccccCCccccCCCCCCEEEc
Q 041479 148 HLNMFQVSVYSLTGSIPIQLLNITSMEYFHVSENQLVGELPPHIGFTLPNVRILLLAGNQFFGNIPHSISNASKLEWLDF 227 (771)
Q Consensus 148 ~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 227 (771)
.+|. .+++|++|++++|+++ .+|. .+++|+.|++++|+|++ +|.. +++|++|+|
T Consensus 95 --------------~lp~---~l~~L~~L~Ls~N~l~-~l~~----~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~L 148 (622)
T 3g06_A 95 --------------SLPV---LPPGLLELSIFSNPLT-HLPA----LPSGLCKLWIFGNQLTS-LPVL---PPGLQELSV 148 (622)
T ss_dssp --------------CCCC---CCTTCCEEEECSCCCC-CCCC----CCTTCCEEECCSSCCSC-CCCC---CTTCCEEEC
T ss_pred --------------cCCC---CCCCCCEEECcCCcCC-CCCC----CCCCcCEEECCCCCCCc-CCCC---CCCCCEEEC
Confidence 2333 4566777777777776 4554 34566677777776664 3332 366666666
Q ss_pred cccccCCCCCcCcccccCCCCCcEEEccCccccccCChhhhhcccccceeecccCcCcccCcccccccCCcceEecCCcc
Q 041479 228 ANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSLSGTLPNSLANFSSHLRYLYMSANPISGSIPTEIGNLKNLIIIAIEKFI 307 (771)
Q Consensus 228 s~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~ 307 (771)
++|+|+++ |. .+++|+.|++++|+|+ .+|.. .++|+.|++++|+|++
T Consensus 149 s~N~l~~l-~~------~~~~L~~L~L~~N~l~-~l~~~----~~~L~~L~Ls~N~l~~--------------------- 195 (622)
T 3g06_A 149 SDNQLASL-PA------LPSELCKLWAYNNQLT-SLPML----PSGLQELSVSDNQLAS--------------------- 195 (622)
T ss_dssp CSSCCSCC-CC------CCTTCCEEECCSSCCS-CCCCC----CTTCCEEECCSSCCSC---------------------
T ss_pred cCCcCCCc-CC------ccCCCCEEECCCCCCC-CCccc----CCCCcEEECCCCCCCC---------------------
Confidence 66666643 21 1245566666666665 34411 1245566666655552
Q ss_pred ceeccCccccCCCCCCEEEccCCcccccCCcccccccccccccccCccceecCCcccccccce-eeecccCcccCCCCcC
Q 041479 308 LIRNIPISVGYLLKLQVLSLFENNISREIPSSLGNFTFLTELNLCGNSIRGSVPSALGSCHQL-WLDLSHNHLTGPIPLA 386 (771)
Q Consensus 308 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l-~L~Ls~N~l~~~~p~~ 386 (771)
+|. .+++|+.|++++|+++ .+|.. +++|+.|+|++|+|++ +| ..++.| .|+|++|+|+. +|.
T Consensus 196 ----l~~---~~~~L~~L~L~~N~l~-~l~~~---~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~-lp~- 258 (622)
T 3g06_A 196 ----LPT---LPSELYKLWAYNNRLT-SLPAL---PSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLTS-LPM- 258 (622)
T ss_dssp ----CCC---CCTTCCEEECCSSCCS-SCCCC---CTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCC-
T ss_pred ----CCC---ccchhhEEECcCCccc-ccCCC---CCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCCc-CCc-
Confidence 222 2367889999999998 45543 4789999999999996 55 344667 89999999995 454
Q ss_pred CCCCCCCCeEECCCCcccccCCcchhhhhcccccccEEECcCCCCCCCCCcc
Q 041479 387 VGNPKSIPHLDLSKNELSGEIPSSLAWIFGYISIFAKLNLSYNNLDGDVPRK 438 (771)
Q Consensus 387 ~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 438 (771)
.+++|+.|+|++|+|+ .+|..+. .+++|+.|+|++|++++.+|..
T Consensus 259 --~~~~L~~L~Ls~N~L~-~lp~~l~----~l~~L~~L~L~~N~l~~~~~~~ 303 (622)
T 3g06_A 259 --LPSGLLSLSVYRNQLT-RLPESLI----HLSSETTVNLEGNPLSERTLQA 303 (622)
T ss_dssp --CCTTCCEEECCSSCCC-SCCGGGG----GSCTTCEEECCSCCCCHHHHHH
T ss_pred --ccccCcEEeCCCCCCC-cCCHHHh----hccccCEEEecCCCCCCcCHHH
Confidence 5789999999999999 7787765 8999999999999999877764
No 316
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.95 E-value=2e-29 Score=270.86 Aligned_cols=223 Identities=13% Similarity=0.085 Sum_probs=161.2
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccc--------hhhHHHHHHHHHHHhccC---------CCCceeEEE
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--------RGALKSFMAECQALRNIR---------HRNLVKIIT 585 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--------~~~~~~~~~E~~~l~~l~---------H~nIv~l~~ 585 (771)
+.....+|+|.+|+||+|++ +++.||||++.... ....+.+.+|++++++++ |||||++.+
T Consensus 22 y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~ 99 (336)
T 2vuw_A 22 LQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNS 99 (336)
T ss_dssp HHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEE
T ss_pred chheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhcc
Confidence 34455689999999999998 46799999997542 223478899999999886 888888888
Q ss_pred EeecCC-------------------------CCCceeEEEEEEeccCCCCCCC--cccCCHHHHHHHHHHHHHHHHHHH-
Q 041479 586 ACSTSD-------------------------FQGNYFRALVYEFMHHGSLESC--PRILSFLRRLNIAIDVASALEYLH- 637 (771)
Q Consensus 586 ~~~~~~-------------------------~~~~~~~~lv~e~~~~g~L~~~--~~~l~~~~~~~i~~~ia~gL~~LH- 637 (771)
++...+ ..+....|+|||||++|++.+. .+.+++.++..++.|++.||+|||
T Consensus 100 ~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~~~~~~~~~~~i~~qi~~aL~~lH~ 179 (336)
T 2vuw_A 100 VHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAVAEA 179 (336)
T ss_dssp EEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred eeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 753210 0012368999999999965443 356789999999999999999999
Q ss_pred hcCCCCeEecCCCCCCeeeCCCC--------------------ceEEecccCccccCcccCCcccccccccccccccchh
Q 041479 638 HHCKKPIVHCDLKPSNVLLDNDM--------------------TAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE 697 (771)
Q Consensus 638 ~~~~~~ivHrdlk~~NILl~~~~--------------------~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE 697 (771)
+. +|+||||||+|||++.++ .+||+|||+|+..... ..+||+.|||||
T Consensus 180 ~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~---------~~~gt~~y~aPE 247 (336)
T 2vuw_A 180 SL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG---------IVVFCDVSMDED 247 (336)
T ss_dssp HH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT---------EEECCCCTTCSG
T ss_pred hC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC---------cEEEeecccChh
Confidence 75 899999999999999887 8999999999865431 236999999999
Q ss_pred --------------HHHH-HHHHHhCCCCCCccccCCccHHHHHHh-hC----CCchhhhcCccccccCcccChhchhhc
Q 041479 698 --------------YGIL-LLEIFTGKRPTSDMFTEGLDLHNFVKM-AL----PDQILQVLDPLFLVGGVQEGEETAEEN 757 (771)
Q Consensus 698 --------------~Gv~-l~el~tg~~P~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~cl~~~p~~R 757 (771)
+|++ .+++++|..||.+.............. .. +......+++.+.....+||+.|
T Consensus 248 ~~~g~~~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d---- 323 (336)
T 2vuw_A 248 LFTGDGDYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS---- 323 (336)
T ss_dssp GGCCCSSHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS----
T ss_pred hhcCCCccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHhccC----
Confidence 2333 666777888885421000011111111 11 12234455666667777999876
Q ss_pred CCHHHHH
Q 041479 758 IKKGQIR 764 (771)
Q Consensus 758 pt~~~vl 764 (771)
|+.|++
T Consensus 324 -sa~e~l 329 (336)
T 2vuw_A 324 -SATDLL 329 (336)
T ss_dssp -SHHHHH
T ss_pred -CHHHHH
Confidence 888887
No 317
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.95 E-value=1.4e-28 Score=271.48 Aligned_cols=224 Identities=20% Similarity=0.184 Sum_probs=158.2
Q ss_pred ccccccccccccceEEEEEecCCCeEEEEEEeeccc---hhhHHHHHHHHHHHhccCC-CCce----------e------
Q 041479 523 LLLNVSYESLVKATVYKGILDLDQTFIAVKVLFLHQ---RGALKSFMAECQALRNIRH-RNLV----------K------ 582 (771)
Q Consensus 523 ~~~~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~H-~nIv----------~------ 582 (771)
+.....+|+|.+|+||+|++..+++.||||++.... ....+.+.+|+.+++.++| +|.. .
T Consensus 80 ~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 159 (413)
T 3dzo_A 80 LVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKD 159 (413)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEEC
T ss_pred EEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhccc
Confidence 334456899999999999999989999999997433 2235789999999999987 3211 1
Q ss_pred -----EEEEeecCCCCCceeEEEEEEeccCCCCCCCc----------ccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEec
Q 041479 583 -----IITACSTSDFQGNYFRALVYEFMHHGSLESCP----------RILSFLRRLNIAIDVASALEYLHHHCKKPIVHC 647 (771)
Q Consensus 583 -----l~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~~----------~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHr 647 (771)
+..++...........+++|+++ +++|.++. ..+++..+..++.|+++||+|||+. +|+||
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~iiHr 235 (413)
T 3dzo_A 160 PQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLVHT 235 (413)
T ss_dssp CC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEECS
T ss_pred CCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccC
Confidence 11111111100112356777765 57876542 3467788999999999999999986 99999
Q ss_pred CCCCCCeeeCCCCceEEecccCccccCcccCCcccccccccccccccchh-------------------------HHHHH
Q 041479 648 DLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE-------------------------YGILL 702 (771)
Q Consensus 648 dlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE-------------------------~Gv~l 702 (771)
||||+|||++.++.+||+|||+++..... ....+| +.||||| |||++
T Consensus 236 DiKp~NILl~~~~~~kL~DFG~a~~~~~~-------~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil 307 (413)
T 3dzo_A 236 YLRPVDIVLDQRGGVFLTGFEHLVRDGAS-------AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAI 307 (413)
T ss_dssp CCCGGGEEECTTCCEEECCGGGCEETTEE-------ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHH
T ss_pred CcccceEEEecCCeEEEEeccceeecCCc-------cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHH
Confidence 99999999999999999999999865432 223467 9999999 49999
Q ss_pred HHHHhCCCCCCccccCCccHHHHHHhhCCCchhhhcCccccccCcccChhchhhcCCHHHHHH
Q 041479 703 LEIFTGKRPTSDMFTEGLDLHNFVKMALPDQILQVLDPLFLVGGVQEGEETAEENIKKGQIRE 765 (771)
Q Consensus 703 ~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rpt~~~vl~ 765 (771)
|||++|+.||.+...... ....++ ....+++.+.....+||+.||++|||+.++++
T Consensus 308 ~elltg~~Pf~~~~~~~~-----~~~~~~--~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 308 YWIWCADLPNTDDAALGG-----SEWIFR--SCKNIPQPVRALLEGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp HHHHHSSCCCCTTGGGSC-----SGGGGS--SCCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred HHHHHCCCCCCCcchhhh-----HHHHHh--hcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 999999999975432211 001111 01123344555666999999999999888753
No 318
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.95 E-value=9.3e-27 Score=241.79 Aligned_cols=217 Identities=22% Similarity=0.254 Sum_probs=160.4
Q ss_pred CCCccceeeeecCCCCcEEEEEcCCCCCcccCCccccCCCCCcEEEcCCCcccccCCccccCCCCCCEEecccCcCcccC
Q 041479 29 VNFCQWLGVTCSLKYQRVILLNLSGQNLTGTASPYIGNLTFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNALQGQI 108 (771)
Q Consensus 29 ~~~c~w~~v~c~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 108 (771)
.++|.|.|+.|... .+++.+++++++++. +|..+. ++|++|+|++|+|++..+.+|.++++|++|+|++|.++
T Consensus 2 ~~~C~~~~~~C~c~-~~~~~l~~~~~~l~~-ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~--- 74 (270)
T 2o6q_A 2 EALCKKDGGVCSCN-NNKNSVDCSSKKLTA-IPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQ--- 74 (270)
T ss_dssp CCCBGGGTCSBEEE-TTTTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCS---
T ss_pred CccCCCCCCCCEeC-CCCCEEEccCCCCCc-cCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccC---
Confidence 48999999999754 456789999999995 555443 68999999999999877778999999999999999975
Q ss_pred CcccccCCcccccCCccccCCCCCCEEecccccCcCCCCccceeeecccccccccCccccCCCCCCEEecccCcCcccCC
Q 041479 109 PDSRLILNKLEGNIPSELGSLLKFKGLGLANNYFTGPIPHLNMFQVSVYSLTGSIPIQLLNITSMEYFHVSENQLVGELP 188 (771)
Q Consensus 109 p~~~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp 188 (771)
...+..|.++++|++|++++|++++ ..+..|.++++|++|++++|+++ .+|
T Consensus 75 -----------~i~~~~~~~l~~L~~L~l~~n~l~~-----------------~~~~~~~~l~~L~~L~l~~n~l~-~~~ 125 (270)
T 2o6q_A 75 -----------TLPAGIFKELKNLETLWVTDNKLQA-----------------LPIGVFDQLVNLAELRLDRNQLK-SLP 125 (270)
T ss_dssp -----------CCCTTTTSSCTTCCEEECCSSCCCC-----------------CCTTTTTTCSSCCEEECCSSCCC-CCC
T ss_pred -----------eeChhhhcCCCCCCEEECCCCcCCc-----------------CCHhHcccccCCCEEECCCCccC-eeC
Confidence 2333446778888888888887762 22344667778888888888887 555
Q ss_pred hhhhhCCCCCcEEEeecCcccccCCccccCCCCCCEEEccccccCCCCCcCcccccCCCCCcEEEccCccccccCChhhh
Q 041479 189 PHIGFTLPNVRILLLAGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSLSGTLPNSLA 268 (771)
Q Consensus 189 ~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~ 268 (771)
+..+..+++|++|+|++|+|++..+..|..+++|+.|+|++|+|+++.+..| .++++|++|+|++|++++..+..+.
T Consensus 126 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~---~~l~~L~~L~L~~N~l~~~~~~~~~ 202 (270)
T 2o6q_A 126 PRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAF---DKLTELKTLKLDNNQLKRVPEGAFD 202 (270)
T ss_dssp TTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTT---TTCTTCCEEECCSSCCSCCCTTTTT
T ss_pred HHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHh---ccCCCcCEEECCCCcCCcCCHHHhc
Confidence 5555577778888888887776666667777777788887777777666555 5667777777777777743333344
Q ss_pred hcccccceeecccCcCc
Q 041479 269 NFSSHLRYLYMSANPIS 285 (771)
Q Consensus 269 ~l~~~L~~L~Ls~N~l~ 285 (771)
.+. +|+.|++++|.+.
T Consensus 203 ~l~-~L~~L~l~~N~~~ 218 (270)
T 2o6q_A 203 SLE-KLKMLQLQENPWD 218 (270)
T ss_dssp TCT-TCCEEECCSSCBC
T ss_pred ccc-CCCEEEecCCCee
Confidence 443 5777777777665
No 319
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.94 E-value=8.9e-28 Score=270.59 Aligned_cols=254 Identities=18% Similarity=0.210 Sum_probs=171.7
Q ss_pred EcCCCCCcccCCccccCCCCCcEEEcCCCcccccCCccccCCCCCCEEecccCcCcccCCcccccCCcccccCCccccCC
Q 041479 50 NLSGQNLTGTASPYIGNLTFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNALQGQIPDSRLILNKLEGNIPSELGSL 129 (771)
Q Consensus 50 ~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~l~~n~l~~~~p~~~~~l 129 (771)
+++..++...+......+++|++|+|++|.|++..|..|+.+++|++|+|++|.+++ ..| |+.+
T Consensus 16 ~~~~~~l~~~l~~l~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~--------------~~~--l~~l 79 (487)
T 3oja_A 16 KVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYE--------------TLD--LESL 79 (487)
T ss_dssp SCCTTTHHHHHHTTSTTGGGCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEE--------------EEE--CTTC
T ss_pred cCchhhhHHHHHHhcccCCCccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCC--------------Ccc--cccC
Confidence 334444433333333445589999999999988777889999999999999998652 232 7778
Q ss_pred CCCCEEecccccCcCCCCccceeeecccccccccCccccCCCCCCEEecccCcCcccCChhhhhCCCCCcEEEeecCccc
Q 041479 130 LKFKGLGLANNYFTGPIPHLNMFQVSVYSLTGSIPIQLLNITSMEYFHVSENQLVGELPPHIGFTLPNVRILLLAGNQFF 209 (771)
Q Consensus 130 ~~L~~L~Ls~N~l~~~lp~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~ 209 (771)
++|+.|+|++|.|++ +| ..++|++|++++|.+++ +|.. .+++|+.|+|++|.|+
T Consensus 80 ~~L~~L~Ls~N~l~~------------------l~----~~~~L~~L~L~~N~l~~-~~~~---~l~~L~~L~L~~N~l~ 133 (487)
T 3oja_A 80 STLRTLDLNNNYVQE------------------LL----VGPSIETLHAANNNISR-VSCS---RGQGKKNIYLANNKIT 133 (487)
T ss_dssp TTCCEEECCSSEEEE------------------EE----ECTTCCEEECCSSCCCC-EEEC---CCSSCEEEECCSSCCC
T ss_pred CCCCEEEecCCcCCC------------------CC----CCCCcCEEECcCCcCCC-CCcc---ccCCCCEEECCCCCCC
Confidence 888888888887762 11 12677888888888873 4432 4577888888888888
Q ss_pred ccCCccccCCCCCCEEEccccccCCCCCcCcccccCCCCCcEEEccCccccccCChhhhhcccccceeecccCcCcccCc
Q 041479 210 GNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSLSGTLPNSLANFSSHLRYLYMSANPISGSIP 289 (771)
Q Consensus 210 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p 289 (771)
+..|..|.++++|+.|+|++|.|++..|..+. ..+++|+.|+|++|.|++. |.. ..+ ++|++|+|++|.|++.+|
T Consensus 134 ~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~l~~L~~L~Ls~N~l~~~-~~~-~~l-~~L~~L~Ls~N~l~~~~~ 208 (487)
T 3oja_A 134 MLRDLDEGCRSRVQYLDLKLNEIDTVNFAELA--ASSDTLEHLNLQYNFIYDV-KGQ-VVF-AKLKTLDLSSNKLAFMGP 208 (487)
T ss_dssp SGGGBCGGGGSSEEEEECTTSCCCEEEGGGGG--GGTTTCCEEECTTSCCCEE-ECC-CCC-TTCCEEECCSSCCCEECG
T ss_pred CCCchhhcCCCCCCEEECCCCCCCCcChHHHh--hhCCcccEEecCCCccccc-ccc-ccC-CCCCEEECCCCCCCCCCH
Confidence 77777777788888888888888776665541 2567777777777777744 322 223 367777777777775433
Q ss_pred ccccccCCcceEecCCccceeccCccccCCCCCCEEEccCCccc-ccCCccccccccccccccc
Q 041479 290 TEIGNLKNLIIIAIEKFILIRNIPISVGYLLKLQVLSLFENNIS-REIPSSLGNFTFLTELNLC 352 (771)
Q Consensus 290 ~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls 352 (771)
.|..+++|+.|++++|.+.+ +|..+..+++|+.|++++|.+. +.+|..+..++.|+.|+++
T Consensus 209 -~~~~l~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 209 -EFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp -GGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHH
T ss_pred -hHcCCCCccEEEecCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHHHHhCCCCcEEecc
Confidence 36666666666666666654 5555666666777777777665 4555566666666666664
No 320
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.94 E-value=5.5e-26 Score=236.77 Aligned_cols=231 Identities=21% Similarity=0.208 Sum_probs=157.2
Q ss_pred EEecccCcCcccCChhhhhCCCCCcEEEeecCcccccCCccccCCCCCCEEEccccccCCCCCcCcccccCCCCCcEEEc
Q 041479 175 YFHVSENQLVGELPPHIGFTLPNVRILLLAGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEVVSL 254 (771)
Q Consensus 175 ~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~L 254 (771)
..+.++.+++ .+|..+. ++|++|++++|+|++..+..|.++++|++|+|++|+++++.+..| .++++|++|++
T Consensus 11 ~~~c~~~~l~-~ip~~l~---~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~---~~l~~L~~L~L 83 (276)
T 2z62_A 11 TYQCMELNFY-KIPDNLP---FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAY---QSLSHLSTLIL 83 (276)
T ss_dssp EEECTTSCCS-SCCSSSC---TTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTT---TTCTTCCEEEC
T ss_pred eEEecCCCcc-ccCCCCC---CCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHc---cCCcCCCEEEC
Confidence 4556666676 7776543 568888888888887777788888888888888888887766555 66778888888
Q ss_pred cCccccccCChhhhhcccccceeecccCcCcccCcccccccCCcceEecCCccceec-cCccccCCCCCCEEEccCCccc
Q 041479 255 SVNSLSGTLPNSLANFSSHLRYLYMSANPISGSIPTEIGNLKNLIIIAIEKFILIRN-IPISVGYLLKLQVLSLFENNIS 333 (771)
Q Consensus 255 s~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~-~p~~~~~l~~L~~L~Ls~N~l~ 333 (771)
++|.+++..|..+..+. +|++|++++|++++..+..|..+++|+.|++++|.+.+. +|..+..+++|++|++++|+++
T Consensus 84 ~~n~l~~~~~~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~ 162 (276)
T 2z62_A 84 TGNPIQSLALGAFSGLS-SLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQ 162 (276)
T ss_dssp TTCCCCEECTTTTTTCT-TCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCC
T ss_pred CCCccCccChhhhcCCc-cccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCC
Confidence 88888766666666665 688888888888766555677777777777776666542 4666666666666666666666
Q ss_pred ccCCcccccccccccccccCccceecCCcccccccceeeecccCcccCCCCcCCCCCCCCCeEECCCCcccccCCcchhh
Q 041479 334 REIPSSLGNFTFLTELNLCGNSIRGSVPSALGSCHQLWLDLSHNHLTGPIPLAVGNPKSIPHLDLSKNELSGEIPSSLAW 413 (771)
Q Consensus 334 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~ 413 (771)
+..+..|..+++|+.|++ .|++++|++++..+..+.. .+|+.|+|++|+|++..+..+
T Consensus 163 ~~~~~~~~~l~~L~~l~l-------------------~L~ls~n~l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~-- 220 (276)
T 2z62_A 163 SIYCTDLRVLHQMPLLNL-------------------SLDLSLNPMNFIQPGAFKE-IRLKELALDTNQLKSVPDGIF-- 220 (276)
T ss_dssp EECGGGGHHHHTCTTCCE-------------------EEECCSSCCCEECTTSSCS-CCEEEEECCSSCCSCCCTTTT--
T ss_pred cCCHHHhhhhhhccccce-------------------eeecCCCcccccCccccCC-CcccEEECCCCceeecCHhHh--
Confidence 555556665555552211 3555666665444444433 367777777777774444333
Q ss_pred hhcccccccEEECcCCCCCCCCCc
Q 041479 414 IFGYISIFAKLNLSYNNLDGDVPR 437 (771)
Q Consensus 414 ~~~~l~~L~~L~Ls~N~l~~~~p~ 437 (771)
..+++|+.|+|++|+++|.+|.
T Consensus 221 --~~l~~L~~L~l~~N~~~c~c~~ 242 (276)
T 2z62_A 221 --DRLTSLQKIWLHTNPWDCSCPR 242 (276)
T ss_dssp --TTCCSCCEEECCSSCBCCCTTT
T ss_pred --cccccccEEEccCCcccccCCc
Confidence 3677777777777777777764
No 321
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.93 E-value=1.7e-25 Score=233.01 Aligned_cols=224 Identities=22% Similarity=0.239 Sum_probs=148.9
Q ss_pred EEEeecCcccccCCccccCCCCCCEEEccccccCCCCCcCcccccCCCCCcEEEccCccccccCChhhhhcccccceeec
Q 041479 200 ILLLAGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSLSGTLPNSLANFSSHLRYLYM 279 (771)
Q Consensus 200 ~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~L 279 (771)
..+..+..+. .+|..+. ++|++|++++|+++++.+..| .++++|++|++++|++++..+..+..+. +|++|++
T Consensus 11 ~~~c~~~~l~-~ip~~l~--~~l~~L~ls~n~l~~~~~~~~---~~l~~L~~L~l~~n~l~~~~~~~~~~l~-~L~~L~L 83 (276)
T 2z62_A 11 TYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSF---FSFPELQVLDLSRCEIQTIEDGAYQSLS-HLSTLIL 83 (276)
T ss_dssp EEECTTSCCS-SCCSSSC--TTCCEEECTTCCCCEECTTTT---TTCTTCSEEECTTCCCCEECTTTTTTCT-TCCEEEC
T ss_pred eEEecCCCcc-ccCCCCC--CCccEEECCCCcccccCHhHh---ccccCCcEEECCCCcCCccCHHHccCCc-CCCEEEC
Confidence 3445555555 3555443 467777887777776665555 5667777777777777755555555554 6777777
Q ss_pred ccCcCcccCcccccccCCcceEecCCccceeccCccccCCCCCCEEEccCCccccc-CCcccccccccccccccCcccee
Q 041479 280 SANPISGSIPTEIGNLKNLIIIAIEKFILIRNIPISVGYLLKLQVLSLFENNISRE-IPSSLGNFTFLTELNLCGNSIRG 358 (771)
Q Consensus 280 s~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~ 358 (771)
++|++++..+..|.++++|+.|++++|.+.+..+..+..+++|++|++++|++++. +|..|..+++|++|+|++|++++
T Consensus 84 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~ 163 (276)
T 2z62_A 84 TGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQS 163 (276)
T ss_dssp TTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCE
T ss_pred CCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCc
Confidence 77777766666666666666666666666655555566666666666666666542 35566666666666666666654
Q ss_pred cCCcccccccceeeecccCcccCCCCcCCCCCCCCC----eEECCCCcccccCCcchhhhhcccccccEEECcCCCCCCC
Q 041479 359 SVPSALGSCHQLWLDLSHNHLTGPIPLAVGNPKSIP----HLDLSKNELSGEIPSSLAWIFGYISIFAKLNLSYNNLDGD 434 (771)
Q Consensus 359 ~~p~~~~~l~~l~L~Ls~N~l~~~~p~~~~~l~~L~----~L~Ls~N~l~~~~p~~l~~~~~~l~~L~~L~Ls~N~l~~~ 434 (771)
..+. .|..+++|+ .|++++|++++..+..+ ...+|+.|+|++|++++.
T Consensus 164 ~~~~-----------------------~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~-----~~~~L~~L~L~~n~l~~~ 215 (276)
T 2z62_A 164 IYCT-----------------------DLRVLHQMPLLNLSLDLSLNPMNFIQPGAF-----KEIRLKELALDTNQLKSV 215 (276)
T ss_dssp ECGG-----------------------GGHHHHTCTTCCEEEECCSSCCCEECTTSS-----CSCCEEEEECCSSCCSCC
T ss_pred CCHH-----------------------HhhhhhhccccceeeecCCCcccccCcccc-----CCCcccEEECCCCceeec
Confidence 4443 343344444 89999999997666654 334899999999999966
Q ss_pred CCccc-cccccccccccCCCcccCC
Q 041479 435 VPRKM-IFKNASAISEAGNEKLCGG 458 (771)
Q Consensus 435 ~p~~~-~~~~~~~~~~~~n~~lc~~ 458 (771)
.+..+ ...++..+.+.+|+..|+-
T Consensus 216 ~~~~~~~l~~L~~L~l~~N~~~c~c 240 (276)
T 2z62_A 216 PDGIFDRLTSLQKIWLHTNPWDCSC 240 (276)
T ss_dssp CTTTTTTCCSCCEEECCSSCBCCCT
T ss_pred CHhHhcccccccEEEccCCcccccC
Confidence 55432 3567788899999998853
No 322
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.93 E-value=4.4e-28 Score=281.12 Aligned_cols=347 Identities=14% Similarity=0.090 Sum_probs=184.4
Q ss_pred CCCCCcEEEcCCCcccccCCccccCC--CCCCEEecccCcCcccCCcccccCCcccccCCccccCCCCCCEEecccccCc
Q 041479 66 NLTFLRLINLQQNNFSSNIPHEIGRL--FRLRHIIFNSNALQGQIPDSRLILNKLEGNIPSELGSLLKFKGLGLANNYFT 143 (771)
Q Consensus 66 ~l~~L~~L~Ls~N~l~~~~p~~~~~l--~~L~~L~Ls~N~l~~~~p~~~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 143 (771)
.+++|++|+|++|.+++..+..+... .+|++|+|++|.-. -...++....++++|++|+|++|.++
T Consensus 110 ~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~------------~~~~l~~~~~~~~~L~~L~L~~~~~~ 177 (592)
T 3ogk_B 110 NLRQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGF------------TTDGLLSIVTHCRKIKTLLMEESSFS 177 (592)
T ss_dssp HCTTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEE------------EHHHHHHHHHHCTTCSEEECTTCEEE
T ss_pred hCCCCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCc------------CHHHHHHHHhhCCCCCEEECcccccc
Confidence 56666666666666665445455443 33666666665410 00012222345677777777777764
Q ss_pred C-----------CCCccceeeecccccc----cccCccccCCCCCCEEecccCcCcccCChhhhhCCCCCcEEEeecCcc
Q 041479 144 G-----------PIPHLNMFQVSVYSLT----GSIPIQLLNITSMEYFHVSENQLVGELPPHIGFTLPNVRILLLAGNQF 208 (771)
Q Consensus 144 ~-----------~lp~L~~l~l~~n~l~----~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~N~l 208 (771)
+ .+|.|+.|+++.|.++ +.++..+.++++|+.|++++|.+. .+|..+. .+++|+.|+++.+..
T Consensus 178 ~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~-~l~~~~~-~~~~L~~L~l~~~~~ 255 (592)
T 3ogk_B 178 EKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEIL-ELVGFFK-AAANLEEFCGGSLNE 255 (592)
T ss_dssp CCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGG-GGHHHHH-HCTTCCEEEECBCCC
T ss_pred CcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHH-HHHHHHh-hhhHHHhhccccccc
Confidence 3 2456777777777775 334444556777777777777776 4664444 667777777764322
Q ss_pred c--------------------------ccCCccccCCCCCCEEEccccccCCCCCcCcccccCCCCCcEEEccCcccccc
Q 041479 209 F--------------------------GNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSLSGT 262 (771)
Q Consensus 209 ~--------------------------~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~ 262 (771)
. +.+|..+..+++|++|+|++|.+++.... ..+..+++|+.|+++ |.+...
T Consensus 256 ~~~~~~~~~~l~~~~~L~~L~l~~~~~~~l~~~~~~~~~L~~L~Ls~~~l~~~~~~--~~~~~~~~L~~L~L~-~~~~~~ 332 (592)
T 3ogk_B 256 DIGMPEKYMNLVFPRKLCRLGLSYMGPNEMPILFPFAAQIRKLDLLYALLETEDHC--TLIQKCPNLEVLETR-NVIGDR 332 (592)
T ss_dssp CTTCTTSSSCCCCCTTCCEEEETTCCTTTGGGGGGGGGGCCEEEETTCCCCHHHHH--HHHTTCTTCCEEEEE-GGGHHH
T ss_pred ccchHHHHHHhhccccccccCccccchhHHHHHHhhcCCCcEEecCCCcCCHHHHH--HHHHhCcCCCEEecc-CccCHH
Confidence 1 12333444455555555555554322110 112445555555555 333222
Q ss_pred -CChhhhhcccccceeecc-----------cCcCcccC-cccccccCCcceEecCCccceeccCccccC-CCCCCEEEcc
Q 041479 263 -LPNSLANFSSHLRYLYMS-----------ANPISGSI-PTEIGNLKNLIIIAIEKFILIRNIPISVGY-LLKLQVLSLF 328 (771)
Q Consensus 263 -~p~~~~~l~~~L~~L~Ls-----------~N~l~~~~-p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~-l~~L~~L~Ls 328 (771)
++..+..+ ++|++|+++ .|.+++.. +..+.++++|+.|+++.|.+.+..+..+.. +++|+.|+++
T Consensus 333 ~l~~~~~~~-~~L~~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~ 411 (592)
T 3ogk_B 333 GLEVLAQYC-KQLKRLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLV 411 (592)
T ss_dssp HHHHHHHHC-TTCCEEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEE
T ss_pred HHHHHHHhC-CCCCEEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEe
Confidence 22222223 256666666 24444321 122334566666666666665544444443 6666666664
Q ss_pred ----CCccccc-----CCcccccccccccccccCc--cceecCCccccc-ccce-eeecccCcccC-CCCcCCCCCCCCC
Q 041479 329 ----ENNISRE-----IPSSLGNFTFLTELNLCGN--SIRGSVPSALGS-CHQL-WLDLSHNHLTG-PIPLAVGNPKSIP 394 (771)
Q Consensus 329 ----~N~l~~~-----~p~~~~~l~~L~~L~Ls~N--~l~~~~p~~~~~-l~~l-~L~Ls~N~l~~-~~p~~~~~l~~L~ 394 (771)
.|++++. ++..+.++++|++|++++| .+++..+..+.. ++.| +|++++|++++ .++..+..+++|+
T Consensus 412 ~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~ 491 (592)
T 3ogk_B 412 LLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQ 491 (592)
T ss_dssp ECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCC
T ss_pred ecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccC
Confidence 4555532 2223455666666666532 244333333322 4556 67777777664 2334445667777
Q ss_pred eEECCCCcccccCCcchhhhhcccccccEEECcCCCCCC
Q 041479 395 HLDLSKNELSGEIPSSLAWIFGYISIFAKLNLSYNNLDG 433 (771)
Q Consensus 395 ~L~Ls~N~l~~~~p~~l~~~~~~l~~L~~L~Ls~N~l~~ 433 (771)
+|+|++|++++..... ....+++|+.|+|++|+++.
T Consensus 492 ~L~l~~n~l~~~~~~~---~~~~l~~L~~L~ls~n~it~ 527 (592)
T 3ogk_B 492 KLEMRGCCFSERAIAA---AVTKLPSLRYLWVQGYRASM 527 (592)
T ss_dssp EEEEESCCCBHHHHHH---HHHHCSSCCEEEEESCBCCT
T ss_pred eeeccCCCCcHHHHHH---HHHhcCccCeeECcCCcCCH
Confidence 7777777765432221 12356677777777777654
No 323
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.92 E-value=1.2e-26 Score=264.96 Aligned_cols=153 Identities=16% Similarity=0.072 Sum_probs=118.8
Q ss_pred cccccceEEEEEecCCCeEEEEEEeecc----------chhhHHHHHHHHHHHhcc-CCCCceeEEEEeecCCCCCceeE
Q 041479 530 ESLVKATVYKGILDLDQTFIAVKVLFLH----------QRGALKSFMAECQALRNI-RHRNLVKIITACSTSDFQGNYFR 598 (771)
Q Consensus 530 ~~~~~~~Vy~~~~~~~~~~vAvK~~~~~----------~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~~~~~ 598 (771)
+.+..|.+++++....++.||||++... .+...++|.+|+++|+++ +|+||+++++++.+.+ ..
T Consensus 243 ~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~-----~~ 317 (569)
T 4azs_A 243 YAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQ-----SG 317 (569)
T ss_dssp C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSS-----EE
T ss_pred ccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECC-----EE
Confidence 4455555555555556678999999643 123456899999999999 6999999999998877 78
Q ss_pred EEEEEeccCCCCCCC---cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCc
Q 041479 599 ALVYEFMHHGSLESC---PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPE 675 (771)
Q Consensus 599 ~lv~e~~~~g~L~~~---~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~ 675 (771)
||||||++||+|.+. ...++. .+|+.||+.||+|+|++ +||||||||+|||++++|.+||+|||+|+....
T Consensus 318 yLVMEyv~G~~L~d~i~~~~~l~~---~~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~ 391 (569)
T 4azs_A 318 WLVMEKLPGRLLSDMLAAGEEIDR---EKILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQ 391 (569)
T ss_dssp EEEEECCCSEEHHHHHHTTCCCCH---HHHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCTTEESCC-
T ss_pred EEEEecCCCCcHHHHHHhCCCCCH---HHHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecccCeeCCC
Confidence 999999999999887 334544 46899999999999996 999999999999999999999999999987654
Q ss_pred ccCCcccccccccccccccchh
Q 041479 676 VMSSNQCSSVGLKGTVGYATPE 697 (771)
Q Consensus 676 ~~~~~~~~~~~~~gt~~y~aPE 697 (771)
... ...+.+||+.|||||
T Consensus 392 ~~~----~~~t~vGTp~YmAPE 409 (569)
T 4azs_A 392 DCS----WPTNLVQSFFVFVNE 409 (569)
T ss_dssp --C----CSHHHHHHHHHHHHH
T ss_pred CCc----cccCceechhhccHH
Confidence 322 233468999999998
No 324
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.92 E-value=1.2e-24 Score=223.18 Aligned_cols=193 Identities=20% Similarity=0.202 Sum_probs=166.3
Q ss_pred CCCccceeeeecCCCCcEEEEEcCCCCCcccCCccccCCCCCcEEEcCCCcccccCCccccCCCCCCEEecccCcCcccC
Q 041479 29 VNFCQWLGVTCSLKYQRVILLNLSGQNLTGTASPYIGNLTFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNALQGQI 108 (771)
Q Consensus 29 ~~~c~w~~v~c~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 108 (771)
++||.|.|..|.. ..+.+++++++++ .+|..+. ++|+.|+|++|++++..|..|.++++|++|+|++|+++
T Consensus 2 ~~Cp~~~gC~C~~---~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~--- 72 (251)
T 3m19_A 2 KTCETVTGCTCNE---GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQ--- 72 (251)
T ss_dssp --CHHHHSSEEEG---GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCC---
T ss_pred ccCCCCCceEcCC---CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCC---
Confidence 4789999999964 3457999999999 5555554 68999999999999988889999999999999999966
Q ss_pred CcccccCCcccccCCccccCCCCCCEEecccccCcCCCCccceeeecccccccccCccccCCCCCCEEecccCcCcccCC
Q 041479 109 PDSRLILNKLEGNIPSELGSLLKFKGLGLANNYFTGPIPHLNMFQVSVYSLTGSIPIQLLNITSMEYFHVSENQLVGELP 188 (771)
Q Consensus 109 p~~~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp 188 (771)
+..|..|.++++|+.|+|++|+|++ ..+..|..+++|++|+|++|+|+ .+|
T Consensus 73 -----------~~~~~~~~~l~~L~~L~L~~n~l~~-----------------~~~~~~~~l~~L~~L~L~~N~l~-~~~ 123 (251)
T 3m19_A 73 -----------TLSAGVFDDLTELGTLGLANNQLAS-----------------LPLGVFDHLTQLDKLYLGGNQLK-SLP 123 (251)
T ss_dssp -----------CCCTTTTTTCTTCCEEECTTSCCCC-----------------CCTTTTTTCTTCCEEECCSSCCC-CCC
T ss_pred -----------ccCHhHhccCCcCCEEECCCCcccc-----------------cChhHhcccCCCCEEEcCCCcCC-CcC
Confidence 3556678999999999999998873 34456788999999999999999 788
Q ss_pred hhhhhCCCCCcEEEeecCcccccCCccccCCCCCCEEEccccccCCCCCcCcccccCCCCCcEEEccCcccccc
Q 041479 189 PHIGFTLPNVRILLLAGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSLSGT 262 (771)
Q Consensus 189 ~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~ 262 (771)
+..+..+++|+.|+|++|+|++..+..|..+++|++|+|++|+|+++.+..| ..+++|+.|+|++|.+++.
T Consensus 124 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~---~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 124 SGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAF---DRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp TTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTT---TTCTTCCEEECCSCCBCTT
T ss_pred hhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHH---hCCCCCCEEEeeCCceeCC
Confidence 7776689999999999999998888889999999999999999998877666 7789999999999999865
No 325
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.92 E-value=2.9e-24 Score=225.14 Aligned_cols=199 Identities=25% Similarity=0.299 Sum_probs=136.3
Q ss_pred CcEEEEEcCCCCCcccCCccccCCCCCcEEEcCCCcccccCCccccCCCCCCEEecccCcCcccCCcccccCCcccccCC
Q 041479 44 QRVILLNLSGQNLTGTASPYIGNLTFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNALQGQIPDSRLILNKLEGNIP 123 (771)
Q Consensus 44 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~l~~n~l~~~~p 123 (771)
.+++.+++++|+++. +|+.+. ++|+.|+|++|+|++..|..|.++++|++|+|++|.+++ ++
T Consensus 10 ~~l~~l~~~~~~l~~-ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~---------------~~ 71 (290)
T 1p9a_G 10 ASHLEVNCDKRNLTA-LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTK---------------LQ 71 (290)
T ss_dssp TTCCEEECTTSCCSS-CCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCE---------------EE
T ss_pred CCccEEECCCCCCCc-CCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCc---------------cc
Confidence 567777888888874 444443 677788888888877777778888888888888887652 12
Q ss_pred ccccCCCCCCEEecccccCcCCCCccceeeecccccccccCccccCCCCCCEEecccCcCcccCChhhhhCCCCCcEEEe
Q 041479 124 SELGSLLKFKGLGLANNYFTGPIPHLNMFQVSVYSLTGSIPIQLLNITSMEYFHVSENQLVGELPPHIGFTLPNVRILLL 203 (771)
Q Consensus 124 ~~~~~l~~L~~L~Ls~N~l~~~lp~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L 203 (771)
. .+.+++|+.|+|++|+|+ .+|..+.++++|++|++++|+|+ .+|+..+..+++|+.|+|
T Consensus 72 ~-~~~l~~L~~L~Ls~N~l~------------------~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~l~~L~~L~L 131 (290)
T 1p9a_G 72 V-DGTLPVLGTLDLSHNQLQ------------------SLPLLGQTLPALTVLDVSFNRLT-SLPLGALRGLGELQELYL 131 (290)
T ss_dssp C-CSCCTTCCEEECCSSCCS------------------SCCCCTTTCTTCCEEECCSSCCC-CCCSSTTTTCTTCCEEEC
T ss_pred C-CCCCCcCCEEECCCCcCC------------------cCchhhccCCCCCEEECCCCcCc-ccCHHHHcCCCCCCEEEC
Confidence 1 156667777777777665 45556667777777777777777 555554456777777777
Q ss_pred ecCcccccCCccccCCCCCCEEEccccccCCCCCcCcccccCCCCCcEEEccCccccccCChhhhhcccccceeecccCc
Q 041479 204 AGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSLSGTLPNSLANFSSHLRYLYMSANP 283 (771)
Q Consensus 204 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~ 283 (771)
++|+|++..+..|..+++|+.|+|++|+|+++.+..| ..+++|+.|+|++|+|+ .+|..++... +|+.|+|++|.
T Consensus 132 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~---~~l~~L~~L~L~~N~l~-~ip~~~~~~~-~L~~l~L~~Np 206 (290)
T 1p9a_G 132 KGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLL---NGLENLDTLLLQENSLY-TIPKGFFGSH-LLPFAFLHGNP 206 (290)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTT---TTCTTCCEEECCSSCCC-CCCTTTTTTC-CCSEEECCSCC
T ss_pred CCCCCCccChhhcccccCCCEEECCCCcCCccCHHHh---cCcCCCCEEECCCCcCC-ccChhhcccc-cCCeEEeCCCC
Confidence 7777776666667777777777777777776655444 55667777777777776 6666666654 57777777776
Q ss_pred Cc
Q 041479 284 IS 285 (771)
Q Consensus 284 l~ 285 (771)
+.
T Consensus 207 ~~ 208 (290)
T 1p9a_G 207 WL 208 (290)
T ss_dssp BC
T ss_pred cc
Confidence 65
No 326
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.92 E-value=4.1e-24 Score=221.81 Aligned_cols=204 Identities=22% Similarity=0.231 Sum_probs=136.1
Q ss_pred CCCEEecccCcCcccCChhhhhCCCCCcEEEeecCcccccCCccccCCCCCCEEEccccccCCCCCcCcccccCCCCCcE
Q 041479 172 SMEYFHVSENQLVGELPPHIGFTLPNVRILLLAGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEV 251 (771)
Q Consensus 172 ~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~ 251 (771)
+.+.+++++|+++ .+|..+. ++++.|+|++|+|++..+..|.++++|++|+|++|+|+.+.+..| .++++|++
T Consensus 17 ~~~~l~~~~~~l~-~ip~~~~---~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~---~~l~~L~~ 89 (270)
T 2o6q_A 17 NKNSVDCSSKKLT-AIPSNIP---ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIF---KELKNLET 89 (270)
T ss_dssp TTTEEECTTSCCS-SCCSCCC---TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTT---SSCTTCCE
T ss_pred CCCEEEccCCCCC-ccCCCCC---CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhh---cCCCCCCE
Confidence 5678888888888 6776543 578888888888887777778888888888888888876655544 56677777
Q ss_pred EEccCccccccCChhhhhcccccceeecccCcCcccCcccccccCCcceEecCCccceeccCccccCCCCCCEEEccCCc
Q 041479 252 VSLSVNSLSGTLPNSLANFSSHLRYLYMSANPISGSIPTEIGNLKNLIIIAIEKFILIRNIPISVGYLLKLQVLSLFENN 331 (771)
Q Consensus 252 L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~ 331 (771)
|++++|++++..+..+..+. +|++|++++|++++..+..|..+ ++|++|+|++|+
T Consensus 90 L~l~~n~l~~~~~~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~l------------------------~~L~~L~Ls~n~ 144 (270)
T 2o6q_A 90 LWVTDNKLQALPIGVFDQLV-NLAELRLDRNQLKSLPPRVFDSL------------------------TKLTYLSLGYNE 144 (270)
T ss_dssp EECCSSCCCCCCTTTTTTCS-SCCEEECCSSCCCCCCTTTTTTC------------------------TTCCEEECCSSC
T ss_pred EECCCCcCCcCCHhHccccc-CCCEEECCCCccCeeCHHHhCcC------------------------cCCCEEECCCCc
Confidence 77777777743333344443 56777777666665544444444 455555555555
Q ss_pred ccccCCcccccccccccccccCccceecCCcccccccce-eeecccCcccCCCCcCCCCCCCCCeEECCCCcccccC
Q 041479 332 ISREIPSSLGNFTFLTELNLCGNSIRGSVPSALGSCHQL-WLDLSHNHLTGPIPLAVGNPKSIPHLDLSKNELSGEI 407 (771)
Q Consensus 332 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 407 (771)
+++..+..|..+++|++|+|++|++++..+..|..++.| .|++++|++++..+..|..+++|+.|+|++|++...-
T Consensus 145 l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 221 (270)
T 2o6q_A 145 LQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTC 221 (270)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSS
T ss_pred CCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCC
Confidence 554444445555556666666665555555555555555 5666666666666667888889999999999987543
No 327
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.91 E-value=2.4e-24 Score=225.74 Aligned_cols=203 Identities=23% Similarity=0.216 Sum_probs=142.3
Q ss_pred ccCCCCCCEEecccCcCcccCChhhhhCCCCCcEEEeecCcccccCCccccCCCCCCEEEccccccCCCCCcCcccccCC
Q 041479 167 LLNITSMEYFHVSENQLVGELPPHIGFTLPNVRILLLAGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNC 246 (771)
Q Consensus 167 ~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l 246 (771)
+.++++++++++++|.++ .+|..++ ++++.|+|++|+|++..|..|.++++|+.|+|++|.|+++.+. ..+
T Consensus 6 ~~~l~~l~~l~~~~~~l~-~ip~~~~---~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~-----~~l 76 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLT-ALPPDLP---KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD-----GTL 76 (290)
T ss_dssp EECSTTCCEEECTTSCCS-SCCSCCC---TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC-----SCC
T ss_pred ccccCCccEEECCCCCCC-cCCCCCC---CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC-----CCC
Confidence 567888999999999998 8887664 6889999999999988888899999999999999998865432 567
Q ss_pred CCCcEEEccCccccccCChhhhhcccccceeecccCcCcccCcccccccCCcceEecCCccceeccCccccCCCCCCEEE
Q 041479 247 TYLEVVSLSVNSLSGTLPNSLANFSSHLRYLYMSANPISGSIPTEIGNLKNLIIIAIEKFILIRNIPISVGYLLKLQVLS 326 (771)
Q Consensus 247 ~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 326 (771)
++|++|++++|+|+ .+|..+..+. +|++|++++|+|++..|..|.++++|+.|++++|.+.+..+..|..+++|+.|+
T Consensus 77 ~~L~~L~Ls~N~l~-~l~~~~~~l~-~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 154 (290)
T 1p9a_G 77 PVLGTLDLSHNQLQ-SLPLLGQTLP-ALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLS 154 (290)
T ss_dssp TTCCEEECCSSCCS-SCCCCTTTCT-TCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred CcCCEEECCCCcCC-cCchhhccCC-CCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEE
Confidence 78888888888887 6777666665 677888888877765556666666666655555555544444445555555555
Q ss_pred ccCCcccccCCcccccccccccccccCccceecCCcccccccceeeecccCcccCCCCcCCCCCCCCCeEECCCCccc
Q 041479 327 LFENNISREIPSSLGNFTFLTELNLCGNSIRGSVPSALGSCHQLWLDLSHNHLTGPIPLAVGNPKSIPHLDLSKNELS 404 (771)
Q Consensus 327 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 404 (771)
|++|+|+...+..|..+++|++| +|++|+|+ .+|..+..+.+|+.|+|++|++.
T Consensus 155 L~~N~l~~l~~~~~~~l~~L~~L-----------------------~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 155 LANNNLTELPAGLLNGLENLDTL-----------------------LLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp CTTSCCSCCCTTTTTTCTTCCEE-----------------------ECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred CCCCcCCccCHHHhcCcCCCCEE-----------------------ECCCCcCC-ccChhhcccccCCeEEeCCCCcc
Confidence 55555554333344444555544 45555554 34555556678888888888886
No 328
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=6.2e-24 Score=220.67 Aligned_cols=207 Identities=23% Similarity=0.237 Sum_probs=137.4
Q ss_pred CcEEEEEcCCCCCcccCCccccCCCCCcEEEcCCCcccccCCccccCCCCCCEEecccCcCcccCCcccccCCcccccCC
Q 041479 44 QRVILLNLSGQNLTGTASPYIGNLTFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNALQGQIPDSRLILNKLEGNIP 123 (771)
Q Consensus 44 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~l~~n~l~~~~p 123 (771)
.+++.|++++|.++.. +.+..+++|++|+|++|++++ + ..+..+++|++|+|++|.++ +..+
T Consensus 41 ~~L~~L~l~~~~i~~~--~~l~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~~L~L~~n~l~--------------~~~~ 102 (272)
T 3rfs_A 41 NSIDQIIANNSDIKSV--QGIQYLPNVRYLALGGNKLHD-I-SALKELTNLTYLILTGNQLQ--------------SLPN 102 (272)
T ss_dssp TTCCEEECTTSCCCCC--TTGGGCTTCCEEECTTSCCCC-C-GGGTTCTTCCEEECTTSCCC--------------CCCT
T ss_pred cceeeeeeCCCCcccc--cccccCCCCcEEECCCCCCCC-c-hhhcCCCCCCEEECCCCccC--------------ccCh
Confidence 4566777777776632 346667777777777777765 2 36677777777777777654 2334
Q ss_pred ccccCCCCCCEEecccccCcCCCCccceeeecccccccccCccccCCCCCCEEecccCcCcccCChhhhhCCCCCcEEEe
Q 041479 124 SELGSLLKFKGLGLANNYFTGPIPHLNMFQVSVYSLTGSIPIQLLNITSMEYFHVSENQLVGELPPHIGFTLPNVRILLL 203 (771)
Q Consensus 124 ~~~~~l~~L~~L~Ls~N~l~~~lp~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L 203 (771)
..|+++++|++|++++|++++ ..+..|.++++|++|++++|+++ .+|+..+..+++|+.|++
T Consensus 103 ~~~~~l~~L~~L~L~~n~l~~-----------------~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~l 164 (272)
T 3rfs_A 103 GVFDKLTNLKELVLVENQLQS-----------------LPDGVFDKLTNLTYLNLAHNQLQ-SLPKGVFDKLTNLTELDL 164 (272)
T ss_dssp TTTTTCTTCCEEECTTSCCCC-----------------CCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEEC
T ss_pred hHhcCCcCCCEEECCCCcCCc-----------------cCHHHhccCCCCCEEECCCCccC-ccCHHHhccCccCCEEEC
Confidence 446666777777777666652 33344667777777777777777 555555446777777777
Q ss_pred ecCcccccCCccccCCCCCCEEEccccccCCCCCcCcccccCCCCCcEEEccCccccccCChhhhhcccccceeecccCc
Q 041479 204 AGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSLSGTLPNSLANFSSHLRYLYMSANP 283 (771)
Q Consensus 204 ~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~ 283 (771)
++|+|++..+..|..+++|++|++++|++++..|..| ..+++|+.|++++|.+.+..| +|++|+++.|.
T Consensus 165 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~---~~l~~L~~L~l~~N~~~~~~~--------~l~~l~~~~n~ 233 (272)
T 3rfs_A 165 SYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVF---DRLTSLQYIWLHDNPWDCTCP--------GIRYLSEWINK 233 (272)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTT---TTCTTCCEEECCSSCBCCCTT--------TTHHHHHHHHH
T ss_pred CCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHH---hCCcCCCEEEccCCCccccCc--------HHHHHHHHHHh
Confidence 7777776666667777777777777777777666544 566777777777777764433 46677777777
Q ss_pred CcccCcccccccCC
Q 041479 284 ISGSIPTEIGNLKN 297 (771)
Q Consensus 284 l~~~~p~~~~~l~~ 297 (771)
++|.+|..++.+..
T Consensus 234 ~~g~ip~~~~~~~~ 247 (272)
T 3rfs_A 234 HSGVVRNSAGSVAP 247 (272)
T ss_dssp TGGGBBCTTSCBCG
T ss_pred CCCcccCcccccCC
Confidence 77777776665543
No 329
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=5.9e-24 Score=220.84 Aligned_cols=186 Identities=20% Similarity=0.194 Sum_probs=103.8
Q ss_pred ccCCCCCCEEecccCcCcccCChhhhhCCCCCcEEEeecCcccccCCccccCCCCCCEEEccccccCCCCCcCcccccCC
Q 041479 167 LLNITSMEYFHVSENQLVGELPPHIGFTLPNVRILLLAGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNC 246 (771)
Q Consensus 167 ~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l 246 (771)
+..+++|++|++++|.++ .++ .+. .+++|++|+|++|+|++..+..|.++++|++|+|++|++++..+..| .++
T Consensus 59 l~~l~~L~~L~l~~n~l~-~~~-~l~-~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~---~~l 132 (272)
T 3rfs_A 59 IQYLPNVRYLALGGNKLH-DIS-ALK-ELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVF---DKL 132 (272)
T ss_dssp GGGCTTCCEEECTTSCCC-CCG-GGT-TCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTT---TTC
T ss_pred cccCCCCcEEECCCCCCC-Cch-hhc-CCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHh---ccC
Confidence 455666666666666665 333 333 56666666666666665555556666666666666666665555444 455
Q ss_pred CCCcEEEccCccccccCChhhhhcccccceeecccCcCcccCcccccccCCcceEecCCccceeccCccccCCCCCCEEE
Q 041479 247 TYLEVVSLSVNSLSGTLPNSLANFSSHLRYLYMSANPISGSIPTEIGNLKNLIIIAIEKFILIRNIPISVGYLLKLQVLS 326 (771)
Q Consensus 247 ~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 326 (771)
++|++|++++|++++..|..+..+. +|++|++++|++++..+..|..+++|+.|++++|.+.+..|..+..+++|+.|+
T Consensus 133 ~~L~~L~L~~n~l~~~~~~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 211 (272)
T 3rfs_A 133 TNLTYLNLAHNQLQSLPKGVFDKLT-NLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIW 211 (272)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCT-TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEE
T ss_pred CCCCEEECCCCccCccCHHHhccCc-cCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEE
Confidence 6666666666666633333334443 566666666666655555555555555555555555554444455555555555
Q ss_pred ccCCcccccCCcccccccccccccccCccceecCCccccc
Q 041479 327 LFENNISREIPSSLGNFTFLTELNLCGNSIRGSVPSALGS 366 (771)
Q Consensus 327 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 366 (771)
+++|.+.+. +++|+.|+++.|.++|.+|..++.
T Consensus 212 l~~N~~~~~-------~~~l~~l~~~~n~~~g~ip~~~~~ 244 (272)
T 3rfs_A 212 LHDNPWDCT-------CPGIRYLSEWINKHSGVVRNSAGS 244 (272)
T ss_dssp CCSSCBCCC-------TTTTHHHHHHHHHTGGGBBCTTSC
T ss_pred ccCCCcccc-------CcHHHHHHHHHHhCCCcccCcccc
Confidence 555554422 234555555555555555554443
No 330
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.91 E-value=7.2e-24 Score=215.74 Aligned_cols=197 Identities=17% Similarity=0.180 Sum_probs=146.1
Q ss_pred CCcEEEcCCCcccccCCccccCCCCCCEEecccCc-CcccCCcccccCCcccccCCccccCCCCCCEEeccc-ccCcCCC
Q 041479 69 FLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNA-LQGQIPDSRLILNKLEGNIPSELGSLLKFKGLGLAN-NYFTGPI 146 (771)
Q Consensus 69 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~l~~n~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~l 146 (771)
+|++|+|++|+|++..+.+|+++++|++|++++|+ ++ +..+..|.++++|++|++++ |++++
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~--------------~i~~~~f~~l~~L~~L~l~~~n~l~~-- 95 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQ--------------QLESHSFYNLSKVTHIEIRNTRNLTY-- 95 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCC--------------EECTTTEESCTTCCEEEEEEETTCCE--
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcc--------------eeCHhHcCCCcCCcEEECCCCCCeeE--
Confidence 78888888888887666678888888888888886 54 23344677888888888887 77762
Q ss_pred CccceeeecccccccccCccccCCCCCCEEecccCcCcccCChhhhhCCCCCc---EEEeecC-cccccCCccccCCCCC
Q 041479 147 PHLNMFQVSVYSLTGSIPIQLLNITSMEYFHVSENQLVGELPPHIGFTLPNVR---ILLLAGN-QFFGNIPHSISNASKL 222 (771)
Q Consensus 147 p~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~---~L~L~~N-~l~~~~p~~~~~l~~L 222 (771)
..+..|.++++|++|++++|+++ .+|. + ..+++|+ +|++++| +++++.+..|.++++|
T Consensus 96 ---------------i~~~~f~~l~~L~~L~l~~n~l~-~lp~-~-~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L 157 (239)
T 2xwt_C 96 ---------------IDPDALKELPLLKFLGIFNTGLK-MFPD-L-TKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNE 157 (239)
T ss_dssp ---------------ECTTSEECCTTCCEEEEEEECCC-SCCC-C-TTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSS
T ss_pred ---------------cCHHHhCCCCCCCEEeCCCCCCc-cccc-c-ccccccccccEEECCCCcchhhcCcccccchhcc
Confidence 33456778888888888888888 5776 3 3777777 8888888 8887777778888888
Q ss_pred C-EEEccccccCCCCCcCcccccCCCCCcEEEccCcc-ccccCChhhhhcccccceeecccCcCcccCcccccccCCcce
Q 041479 223 E-WLDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNS-LSGTLPNSLANFSSHLRYLYMSANPISGSIPTEIGNLKNLII 300 (771)
Q Consensus 223 ~-~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 300 (771)
+ .|++++|+++.+.+..| .. ++|+.|++++|+ +++..+..+..+.++|+.|++++|+|++. |.. .+++|+.
T Consensus 158 ~~~L~l~~n~l~~i~~~~~---~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l-~~~--~~~~L~~ 230 (239)
T 2xwt_C 158 TLTLKLYNNGFTSVQGYAF---NG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTAL-PSK--GLEHLKE 230 (239)
T ss_dssp EEEEECCSCCCCEECTTTT---TT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCCC-CCT--TCTTCSE
T ss_pred eeEEEcCCCCCcccCHhhc---CC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCccccC-Chh--HhccCce
Confidence 8 88888888885554444 33 688888888884 87444555655513788888888888854 433 5667777
Q ss_pred EecCCc
Q 041479 301 IAIEKF 306 (771)
Q Consensus 301 L~l~~n 306 (771)
|+++++
T Consensus 231 L~l~~~ 236 (239)
T 2xwt_C 231 LIARNT 236 (239)
T ss_dssp EECTTC
T ss_pred eeccCc
Confidence 777664
No 331
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.90 E-value=3.5e-26 Score=265.11 Aligned_cols=377 Identities=12% Similarity=0.058 Sum_probs=250.6
Q ss_pred CcEEEEEcCCCCCcccCCccccCC--CCCcEEEcCCCc-ccc-cCCccccCCCCCCEEecccCcCcccCC----------
Q 041479 44 QRVILLNLSGQNLTGTASPYIGNL--TFLRLINLQQNN-FSS-NIPHEIGRLFRLRHIIFNSNALQGQIP---------- 109 (771)
Q Consensus 44 ~~l~~L~Ls~n~l~~~~~~~~~~l--~~L~~L~Ls~N~-l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p---------- 109 (771)
++++.|+|++|.+++..+..+..+ ++|++|+|++|. ++. .++..+.++++|++|+|++|.+++.-.
T Consensus 112 ~~L~~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~ 191 (592)
T 3ogk_B 112 RQLKSVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHN 191 (592)
T ss_dssp TTCCEEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHC
T ss_pred CCCCeEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcC
Confidence 678899999998887666666553 348888888876 221 123334577888888888887653211
Q ss_pred ----cccccCCccc----ccCCccccCCCCCCEEecccccCcC------CCCccceeeecccccc---cccCccccCCCC
Q 041479 110 ----DSRLILNKLE----GNIPSELGSLLKFKGLGLANNYFTG------PIPHLNMFQVSVYSLT---GSIPIQLLNITS 172 (771)
Q Consensus 110 ----~~~l~~n~l~----~~~p~~~~~l~~L~~L~Ls~N~l~~------~lp~L~~l~l~~n~l~---~~~p~~~~~l~~ 172 (771)
...+..|.++ +.++..+.++++|+.|++++|.+.+ .++.|+.++++.+... +..+..+..+++
T Consensus 192 ~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~ 271 (592)
T 3ogk_B 192 TSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILELVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRK 271 (592)
T ss_dssp CCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGGGHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTT
T ss_pred CCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHHHHHHHhhhhHHHhhcccccccccchHHHHHHhhcccc
Confidence 0112223332 2233334455666666666665543 2345566655543222 233345566677
Q ss_pred CCEEecccCcCcccCChhhhhCCCCCcEEEeecCcccccCC-ccccCCCCCCEEEccccccCCC-CCcCcccccCCCCCc
Q 041479 173 MEYFHVSENQLVGELPPHIGFTLPNVRILLLAGNQFFGNIP-HSISNASKLEWLDFANNSLTGL-IPEDLDSLVNCTYLE 250 (771)
Q Consensus 173 L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~l~~L~ 250 (771)
|+.|+++++... .+|..+. .+++|++|+|++|.+++... ..+..+++|+.|+++ |.+... ++.. ...+++|+
T Consensus 272 L~~L~l~~~~~~-~l~~~~~-~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~-~~~~~~~l~~~---~~~~~~L~ 345 (592)
T 3ogk_B 272 LCRLGLSYMGPN-EMPILFP-FAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETR-NVIGDRGLEVL---AQYCKQLK 345 (592)
T ss_dssp CCEEEETTCCTT-TGGGGGG-GGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE-GGGHHHHHHHH---HHHCTTCC
T ss_pred ccccCccccchh-HHHHHHh-hcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEecc-CccCHHHHHHH---HHhCCCCC
Confidence 777777775443 6666554 78999999999999875443 346889999999999 444422 2221 25678999
Q ss_pred EEEcc-----------CccccccCChhhhhcccccceeecccCcCcccCcccccc-cCCcceEecC----Cccceec---
Q 041479 251 VVSLS-----------VNSLSGTLPNSLANFSSHLRYLYMSANPISGSIPTEIGN-LKNLIIIAIE----KFILIRN--- 311 (771)
Q Consensus 251 ~L~Ls-----------~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~l~----~n~l~~~--- 311 (771)
+|+++ .|.+++.....+....++|++|+++.|.+++..+..++. +++|+.|+++ .|.+.+.
T Consensus 346 ~L~L~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~ 425 (592)
T 3ogk_B 346 RLRIERGADEQGMEDEEGLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLD 425 (592)
T ss_dssp EEEEECCCCSSTTSSTTCCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCH
T ss_pred EEEeecCccccccccccCccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHH
Confidence 99999 477775433333332348999999999999877777766 8999999996 5666542
Q ss_pred --cCccccCCCCCCEEEccCC--cccccCCcccc-cccccccccccCcccee-cCCcccccccce-eeecccCcccCC-C
Q 041479 312 --IPISVGYLLKLQVLSLFEN--NISREIPSSLG-NFTFLTELNLCGNSIRG-SVPSALGSCHQL-WLDLSHNHLTGP-I 383 (771)
Q Consensus 312 --~p~~~~~l~~L~~L~Ls~N--~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~l-~L~Ls~N~l~~~-~ 383 (771)
++..+..+++|+.|++++| .++...+..+. .+++|++|+|++|++++ .++..+..++.| .|++++|.+++. +
T Consensus 426 ~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~ 505 (592)
T 3ogk_B 426 NGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAI 505 (592)
T ss_dssp HHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHH
T ss_pred HHHHHHHHhCCCCCEEEEecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHH
Confidence 4444677999999999854 36655554444 47899999999999986 345556778888 899999998754 3
Q ss_pred CcCCCCCCCCCeEECCCCcccccCCcchhhhhcccccccEEECcCC
Q 041479 384 PLAVGNPKSIPHLDLSKNELSGEIPSSLAWIFGYISIFAKLNLSYN 429 (771)
Q Consensus 384 p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~l~~L~~L~Ls~N 429 (771)
+..+..+++|++|+|++|+++..--..+ ...++.+....+..+
T Consensus 506 ~~~~~~l~~L~~L~ls~n~it~~~~~~l---~~~~p~l~~~~~~~~ 548 (592)
T 3ogk_B 506 AAAVTKLPSLRYLWVQGYRASMTGQDLM---QMARPYWNIELIPSR 548 (592)
T ss_dssp HHHHHHCSSCCEEEEESCBCCTTCTTGG---GGCCTTEEEEEECCC
T ss_pred HHHHHhcCccCeeECcCCcCCHHHHHHH---HHhCCCcEEEEecCc
Confidence 4445678999999999999985433222 235566655555544
No 332
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.90 E-value=1.6e-23 Score=213.17 Aligned_cols=208 Identities=17% Similarity=0.223 Sum_probs=121.8
Q ss_pred cCcccCChhhhhCCCCCcEEEeecCcccccCCccccCCCCCCEEEccccc-cCCCCCcCcccccCCCCCcEEEccC-ccc
Q 041479 182 QLVGELPPHIGFTLPNVRILLLAGNQFFGNIPHSISNASKLEWLDFANNS-LTGLIPEDLDSLVNCTYLEVVSLSV-NSL 259 (771)
Q Consensus 182 ~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~l~~L~~L~Ls~-N~l 259 (771)
.++ .+|. +. ++|+.|++++|+|+++.+..|.++++|++|++++|+ ++.+.+..| .++++|++|++++ |++
T Consensus 22 ~l~-~ip~-~~---~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f---~~l~~L~~L~l~~~n~l 93 (239)
T 2xwt_C 22 DIQ-RIPS-LP---PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSF---YNLSKVTHIEIRNTRNL 93 (239)
T ss_dssp SCS-SCCC-CC---TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTE---ESCTTCCEEEEEEETTC
T ss_pred Ccc-ccCC-CC---CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHc---CCCcCCcEEECCCCCCe
Confidence 355 6776 32 367778888888877766677777788888888776 776655555 5667777777776 777
Q ss_pred cccCChhhhhcccccceeecccCcCcccCcccccccCCcceEecCCccceeccCccccCCCCCCEEEccCC-cccccCCc
Q 041479 260 SGTLPNSLANFSSHLRYLYMSANPISGSIPTEIGNLKNLIIIAIEKFILIRNIPISVGYLLKLQVLSLFEN-NISREIPS 338 (771)
Q Consensus 260 ~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N-~l~~~~p~ 338 (771)
++..+..+..+. +|++|++++|++++ +|. |..+++|+ .|++|++++| ++++..+.
T Consensus 94 ~~i~~~~f~~l~-~L~~L~l~~n~l~~-lp~-~~~l~~L~---------------------~L~~L~l~~N~~l~~i~~~ 149 (239)
T 2xwt_C 94 TYIDPDALKELP-LLKFLGIFNTGLKM-FPD-LTKVYSTD---------------------IFFILEITDNPYMTSIPVN 149 (239)
T ss_dssp CEECTTSEECCT-TCCEEEEEEECCCS-CCC-CTTCCBCC---------------------SEEEEEEESCTTCCEECTT
T ss_pred eEcCHHHhCCCC-CCCEEeCCCCCCcc-ccc-cccccccc---------------------cccEEECCCCcchhhcCcc
Confidence 744444455554 67777777777764 443 55444444 0114444444 44444444
Q ss_pred ccccccccc-cccccCccceecCCcccccccce-eeecccCc-ccCCCCcCCCCC-CCCCeEECCCCcccccCCcchhhh
Q 041479 339 SLGNFTFLT-ELNLCGNSIRGSVPSALGSCHQL-WLDLSHNH-LTGPIPLAVGNP-KSIPHLDLSKNELSGEIPSSLAWI 414 (771)
Q Consensus 339 ~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~l-~L~Ls~N~-l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~l~~~ 414 (771)
.|..+++|+ +|++++|+++...+..+.. ..| .|++++|+ +++..+..|..+ ++|+.|++++|+|++ +|..
T Consensus 150 ~~~~l~~L~~~L~l~~n~l~~i~~~~~~~-~~L~~L~L~~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~-l~~~---- 223 (239)
T 2xwt_C 150 AFQGLCNETLTLKLYNNGFTSVQGYAFNG-TKLDAVYLNKNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTA-LPSK---- 223 (239)
T ss_dssp TTTTTBSSEEEEECCSCCCCEECTTTTTT-CEEEEEECTTCTTCCEECTTTTTTCSBCCSEEECTTCCCCC-CCCT----
T ss_pred cccchhcceeEEEcCCCCCcccCHhhcCC-CCCCEEEcCCCCCcccCCHHHhhccccCCcEEECCCCcccc-CChh----
Confidence 455555555 5555555555333333333 344 55555553 554555566666 666666666666663 3332
Q ss_pred hcccccccEEECcCC
Q 041479 415 FGYISIFAKLNLSYN 429 (771)
Q Consensus 415 ~~~l~~L~~L~Ls~N 429 (771)
.+++|+.|+++++
T Consensus 224 --~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 224 --GLEHLKELIARNT 236 (239)
T ss_dssp --TCTTCSEEECTTC
T ss_pred --HhccCceeeccCc
Confidence 3456666666654
No 333
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.90 E-value=1.6e-24 Score=235.03 Aligned_cols=263 Identities=15% Similarity=0.144 Sum_probs=182.3
Q ss_pred EEEcCCCCCcccCCccccCCCCCcEEEcCCCcccccCC----ccccCCC-CCCEEecccCcCcccCCcccccCCcccccC
Q 041479 48 LLNLSGQNLTGTASPYIGNLTFLRLINLQQNNFSSNIP----HEIGRLF-RLRHIIFNSNALQGQIPDSRLILNKLEGNI 122 (771)
Q Consensus 48 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p----~~~~~l~-~L~~L~Ls~N~l~~~~p~~~l~~n~l~~~~ 122 (771)
..+|++|++++.+|..+...++|++|||++|.|++..+ .+|.+++ +|++|+|++|.+++ ..
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~--------------~~ 67 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGF--------------KN 67 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGG--------------SC
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCH--------------HH
Confidence 46889999999888888888889999999999997666 7888998 89999999999763 33
Q ss_pred CccccCC-----CCCCEEecccccCcCCCCccceeeecccccccccCccccCC-CCCCEEecccCcCcccCChhhh---h
Q 041479 123 PSELGSL-----LKFKGLGLANNYFTGPIPHLNMFQVSVYSLTGSIPIQLLNI-TSMEYFHVSENQLVGELPPHIG---F 193 (771)
Q Consensus 123 p~~~~~l-----~~L~~L~Ls~N~l~~~lp~L~~l~l~~n~l~~~~p~~~~~l-~~L~~L~Ls~N~l~g~lp~~~~---~ 193 (771)
+..+..+ ++|++|+|++|++++..+. .+...+..+ ++|++|+|++|++++.-+..+. .
T Consensus 68 ~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~-------------~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~ 134 (362)
T 3goz_A 68 SDELVQILAAIPANVTSLNLSGNFLSYKSSD-------------ELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFS 134 (362)
T ss_dssp HHHHHHHHHTSCTTCCEEECCSSCGGGSCHH-------------HHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHT
T ss_pred HHHHHHHHhccCCCccEEECcCCcCChHHHH-------------HHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHH
Confidence 4444443 8889999998888732110 111124445 7899999999999843333332 1
Q ss_pred C-CCCCcEEEeecCcccccCC----ccccCCC-CCCEEEccccccCCCCCcCcc-cccCC-CCCcEEEccCcccccc---
Q 041479 194 T-LPNVRILLLAGNQFFGNIP----HSISNAS-KLEWLDFANNSLTGLIPEDLD-SLVNC-TYLEVVSLSVNSLSGT--- 262 (771)
Q Consensus 194 ~-l~~L~~L~L~~N~l~~~~p----~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~-~l~~l-~~L~~L~Ls~N~l~~~--- 262 (771)
. .++|++|+|++|+|+...+ ..+..++ +|++|+|++|+|++..+..+. .+..+ ++|++|+|++|.|++.
T Consensus 135 ~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~ 214 (362)
T 3goz_A 135 NLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYA 214 (362)
T ss_dssp TSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHH
T ss_pred hCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHH
Confidence 2 2589999999999885333 3345555 899999999999876654442 22444 5899999999998842
Q ss_pred -CChhhhhcccccceeecccCcCcccCc----ccccccCCcceEecCCccceec-------cCccccCCCCCCEEEccCC
Q 041479 263 -LPNSLANFSSHLRYLYMSANPISGSIP----TEIGNLKNLIIIAIEKFILIRN-------IPISVGYLLKLQVLSLFEN 330 (771)
Q Consensus 263 -~p~~~~~l~~~L~~L~Ls~N~l~~~~p----~~~~~l~~L~~L~l~~n~l~~~-------~p~~~~~l~~L~~L~Ls~N 330 (771)
++..+....++|++|+|++|.|++..+ ..+..+++|+.|++++|.+... ++..+..+++|+.||+++|
T Consensus 215 ~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N 294 (362)
T 3goz_A 215 ELAYIFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGK 294 (362)
T ss_dssp HHHHHHHHSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSC
T ss_pred HHHHHHhcCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCC
Confidence 555565544579999999998886544 2345567777777777763222 2334556666677777777
Q ss_pred cccccCC
Q 041479 331 NISREIP 337 (771)
Q Consensus 331 ~l~~~~p 337 (771)
++....+
T Consensus 295 ~l~~~~~ 301 (362)
T 3goz_A 295 EIHPSHS 301 (362)
T ss_dssp BCCGGGC
T ss_pred cCCCcch
Confidence 7654433
No 334
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.90 E-value=6.7e-25 Score=235.38 Aligned_cols=268 Identities=15% Similarity=0.212 Sum_probs=157.5
Q ss_pred CCccceeeeecCCCCcEEEEEcCCCCCcccCCccccCC--CCCcEEEcCCCcccccCCccccCCCCCCEEecccCcCccc
Q 041479 30 NFCQWLGVTCSLKYQRVILLNLSGQNLTGTASPYIGNL--TFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNALQGQ 107 (771)
Q Consensus 30 ~~c~w~~v~c~~~~~~l~~L~Ls~n~l~~~~~~~~~~l--~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 107 (771)
-|.+|.++.|+. ..++.+|+++|++. +..+..+ ++++.|++++|.+++..+. +.++++|++|+|++|.++
T Consensus 35 vc~~W~~~~~~~--~~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~-- 106 (336)
T 2ast_B 35 VCKRWYRLASDE--SLWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIE-- 106 (336)
T ss_dssp SCHHHHHHHTCS--TTSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEEC--
T ss_pred HHHHHHHHhcCc--hhheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcC--
Confidence 355799998763 46788999998876 4567777 8899999999999875554 567888888888888854
Q ss_pred CCcccccCCccccc-CCccccCCCCCCEEecccccCcCCCCccceeeecccccccccCccccCCCCCCEEecccC-cCcc
Q 041479 108 IPDSRLILNKLEGN-IPSELGSLLKFKGLGLANNYFTGPIPHLNMFQVSVYSLTGSIPIQLLNITSMEYFHVSEN-QLVG 185 (771)
Q Consensus 108 ~p~~~l~~n~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~lp~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N-~l~g 185 (771)
+. +|..+..+++|++|+|++|++++ ..+..+..+++|++|++++| .+++
T Consensus 107 ------------~~~~~~~~~~~~~L~~L~L~~~~l~~-----------------~~~~~l~~~~~L~~L~L~~~~~l~~ 157 (336)
T 2ast_B 107 ------------VSTLHGILSQCSKLQNLSLEGLRLSD-----------------PIVNTLAKNSNLVRLNLSGCSGFSE 157 (336)
T ss_dssp ------------HHHHHHHHTTBCCCSEEECTTCBCCH-----------------HHHHHHTTCTTCSEEECTTCBSCCH
T ss_pred ------------HHHHHHHHhhCCCCCEEeCcCcccCH-----------------HHHHHHhcCCCCCEEECCCCCCCCH
Confidence 22 45556677777777777776552 33445556667777777766 4553
Q ss_pred c-CChhhhhCCCCCcEEEeecC-ccccc-CCccccCCC-CCCEEEccccccCCCCCcCcccccCCCCCcEEEccCcccc-
Q 041479 186 E-LPPHIGFTLPNVRILLLAGN-QFFGN-IPHSISNAS-KLEWLDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSLS- 260 (771)
Q Consensus 186 ~-lp~~~~~~l~~L~~L~L~~N-~l~~~-~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~- 260 (771)
. +|..+. .+++|+.|++++| .+++. ++..+..++ +|++|++++|.+ .++
T Consensus 158 ~~l~~~~~-~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~-------------------------~~~~ 211 (336)
T 2ast_B 158 FALQTLLS-SCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRK-------------------------NLQK 211 (336)
T ss_dssp HHHHHHHH-HCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGG-------------------------GSCH
T ss_pred HHHHHHHh-cCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcc-------------------------cCCH
Confidence 2 333333 5566666666666 55532 344445555 555555555521 222
Q ss_pred ccCChhhhhcccccceeecccCc-CcccCcccccccCCcceEecCCcc-ceeccCccccCCCCCCEEEccCCcccccCCc
Q 041479 261 GTLPNSLANFSSHLRYLYMSANP-ISGSIPTEIGNLKNLIIIAIEKFI-LIRNIPISVGYLLKLQVLSLFENNISREIPS 338 (771)
Q Consensus 261 ~~~p~~~~~l~~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~l~~n~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 338 (771)
+.+|..+..++ +|++|++++|. +++..+..+..+++|+.|++++|. +.......+..+++|+.|++++| ++ ..
T Consensus 212 ~~l~~~~~~~~-~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~-i~---~~ 286 (336)
T 2ast_B 212 SDLSTLVRRCP-NLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI-VP---DG 286 (336)
T ss_dssp HHHHHHHHHCT-TCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-SC---TT
T ss_pred HHHHHHHhhCC-CCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-cC---HH
Confidence 22333333333 45555555555 443444444555555555555543 11111123555667777777766 22 22
Q ss_pred cccccc-ccccccccCccceecCCcccc
Q 041479 339 SLGNFT-FLTELNLCGNSIRGSVPSALG 365 (771)
Q Consensus 339 ~~~~l~-~L~~L~Ls~N~l~~~~p~~~~ 365 (771)
.+..+. +|+.|++++|++++..|..++
T Consensus 287 ~~~~l~~~l~~L~l~~n~l~~~~~~~~~ 314 (336)
T 2ast_B 287 TLQLLKEALPHLQINCSHFTTIARPTIG 314 (336)
T ss_dssp CHHHHHHHSTTSEESCCCSCCTTCSSCS
T ss_pred HHHHHHhhCcceEEecccCccccCCccc
Confidence 344442 366666777777666665544
No 335
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.90 E-value=5e-25 Score=238.96 Aligned_cols=263 Identities=14% Similarity=0.146 Sum_probs=147.7
Q ss_pred eeecccccccccCccccCCCCCCEEecccCcCcccCCh----hhhhCCC-CCcEEEeecCcccccCCccccCC-----CC
Q 041479 152 FQVSVYSLTGSIPIQLLNITSMEYFHVSENQLVGELPP----HIGFTLP-NVRILLLAGNQFFGNIPHSISNA-----SK 221 (771)
Q Consensus 152 l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~----~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l-----~~ 221 (771)
++++.|+++|.+|..+...++|++|+|++|.++ .++. ..+..++ +|++|+|++|+|++..+..|..+ ++
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~-~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLY-SISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGG-GSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCC-hHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 345555666666666666666888888888877 4443 3334666 78888888888877666666665 77
Q ss_pred CCEEEccccccCCCCCcCccc-ccCC-CCCcEEEccCccccccCChhhhhc----ccccceeecccCcCcccCcc----c
Q 041479 222 LEWLDFANNSLTGLIPEDLDS-LVNC-TYLEVVSLSVNSLSGTLPNSLANF----SSHLRYLYMSANPISGSIPT----E 291 (771)
Q Consensus 222 L~~L~Ls~N~l~~~~p~~~~~-l~~l-~~L~~L~Ls~N~l~~~~p~~~~~l----~~~L~~L~Ls~N~l~~~~p~----~ 291 (771)
|++|+|++|+|++..+..+.. +..+ ++|++|+|++|++++..+..+... .++|++|+|++|.|++..+. .
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 888888888877665543322 2344 677777777777775444443332 23677777777777643322 2
Q ss_pred ccccC-CcceEecCCccceeccCcccc----CC-CCCCEEEccCCccccc----CCccccc-ccccccccccCccceecC
Q 041479 292 IGNLK-NLIIIAIEKFILIRNIPISVG----YL-LKLQVLSLFENNISRE----IPSSLGN-FTFLTELNLCGNSIRGSV 360 (771)
Q Consensus 292 ~~~l~-~L~~L~l~~n~l~~~~p~~~~----~l-~~L~~L~Ls~N~l~~~----~p~~~~~-l~~L~~L~Ls~N~l~~~~ 360 (771)
+..++ +|+.|++++|.+.+..+..+. .. ++|++|+|++|+++.. ++..+.. .++|++|+|++|+|++..
T Consensus 162 l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~ 241 (362)
T 3goz_A 162 LAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPS 241 (362)
T ss_dssp HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCC
T ss_pred HhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHH
Confidence 23333 555555555555444333222 22 3555555555555431 2223332 224555555555444322
Q ss_pred CcccccccceeeecccCcccCCCCcCCCCCCCCCeEECCCCcccccCCcch---hhhhcccccccEEECcCCCCCCC
Q 041479 361 PSALGSCHQLWLDLSHNHLTGPIPLAVGNPKSIPHLDLSKNELSGEIPSSL---AWIFGYISIFAKLNLSYNNLDGD 434 (771)
Q Consensus 361 p~~~~~l~~l~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l---~~~~~~l~~L~~L~Ls~N~l~~~ 434 (771)
+..+ ...+..+++|++|+|++|++.+..+..+ ...+..+++|+.||+++|++.+.
T Consensus 242 ~~~l-------------------~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~ 299 (362)
T 3goz_A 242 LENL-------------------KLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPS 299 (362)
T ss_dssp HHHH-------------------HHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGG
T ss_pred HHHH-------------------HHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCc
Confidence 2111 1334556667777777777553333222 11234566677777777777654
No 336
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.89 E-value=2.9e-26 Score=265.81 Aligned_cols=212 Identities=14% Similarity=0.119 Sum_probs=113.8
Q ss_pred CccccCCCCCCEEEccccccCCCCCcCcccccCCCCCcEEEccCccccccCChhhhhcccccceeecc---------cCc
Q 041479 213 PHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSLSGTLPNSLANFSSHLRYLYMS---------ANP 283 (771)
Q Consensus 213 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls---------~N~ 283 (771)
+..+..+++|++|+|++|.++...... .+..+++|+.|++++| ++......+....++|++|+++ .|.
T Consensus 282 ~~~~~~~~~L~~L~L~~~~l~~~~l~~--~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~ 358 (594)
T 2p1m_B 282 PAVYSVCSRLTTLNLSYATVQSYDLVK--LLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVA 358 (594)
T ss_dssp GGGHHHHTTCCEEECTTCCCCHHHHHH--HHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSC
T ss_pred HHHHHhhCCCCEEEccCCCCCHHHHHH--HHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCC
Confidence 333445667777777777655321111 1245677777777766 3322112222212357777663 344
Q ss_pred CcccCccccc-ccCCcceEecCCccceeccCcccc-CCCCCCEEEcc--C----Cccccc-----CCccccccccccccc
Q 041479 284 ISGSIPTEIG-NLKNLIIIAIEKFILIRNIPISVG-YLLKLQVLSLF--E----NNISRE-----IPSSLGNFTFLTELN 350 (771)
Q Consensus 284 l~~~~p~~~~-~l~~L~~L~l~~n~l~~~~p~~~~-~l~~L~~L~Ls--~----N~l~~~-----~p~~~~~l~~L~~L~ 350 (771)
+++.....+. ++++|+.|.++.|.+....+..+. .+++|+.|+++ + |+++.. ++..+..+++|+.|+
T Consensus 359 l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~ 438 (594)
T 2p1m_B 359 LTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLS 438 (594)
T ss_dssp CCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEE
T ss_pred CCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEe
Confidence 4432222222 366777776666666554444443 46777777777 3 445421 111245566777777
Q ss_pred ccCccceecCCccccc-ccce-eeecccCcccCCCCcCC-CCCCCCCeEECCCCcccccCCcchhhhhcccccccEEECc
Q 041479 351 LCGNSIRGSVPSALGS-CHQL-WLDLSHNHLTGPIPLAV-GNPKSIPHLDLSKNELSGEIPSSLAWIFGYISIFAKLNLS 427 (771)
Q Consensus 351 Ls~N~l~~~~p~~~~~-l~~l-~L~Ls~N~l~~~~p~~~-~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~l~~L~~L~Ls 427 (771)
|++ .+++..+..+.. ++.| .|+|++|.+++.....+ ..+++|++|+|++|++++..+..+ ...+++|+.|+++
T Consensus 439 L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~---~~~l~~L~~L~l~ 514 (594)
T 2p1m_B 439 LSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLAN---ASKLETMRSLWMS 514 (594)
T ss_dssp CCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHT---GGGGGGSSEEEEE
T ss_pred ecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHH---HHhCCCCCEEeee
Confidence 766 555443333433 5556 67777777654433333 446777777777777753322211 2346677777777
Q ss_pred CCCC
Q 041479 428 YNNL 431 (771)
Q Consensus 428 ~N~l 431 (771)
+|++
T Consensus 515 ~~~~ 518 (594)
T 2p1m_B 515 SCSV 518 (594)
T ss_dssp SSCC
T ss_pred CCCC
Confidence 7766
No 337
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.89 E-value=2.1e-23 Score=221.14 Aligned_cols=230 Identities=18% Similarity=0.192 Sum_probs=159.4
Q ss_pred CCCCCEEecccCcCcccCCcccccCCcccccCCccccCCCCCCEEecccccCcCCCCccceeeecccccccccCccc--c
Q 041479 91 LFRLRHIIFNSNALQGQIPDSRLILNKLEGNIPSELGSLLKFKGLGLANNYFTGPIPHLNMFQVSVYSLTGSIPIQL--L 168 (771)
Q Consensus 91 l~~L~~L~Ls~N~l~~~~p~~~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~L~~l~l~~n~l~~~~p~~~--~ 168 (771)
...++.|.+.++.++.. .+.. +. .+..+++|++|++++|+++ +..|..+ .
T Consensus 63 ~~~l~~l~l~~~~~~~~---------~~~~-~~-~~~~~~~L~~L~l~~n~l~-----------------~~~~~~~~~~ 114 (310)
T 4glp_A 63 ALRVRRLTVGAAQVPAQ---------LLVG-AL-RVLAYSRLKELTLEDLKIT-----------------GTMPPLPLEA 114 (310)
T ss_dssp SCCCCEEEECSCCCBHH---------HHHH-HH-HHHHHSCCCEEEEESCCCB-----------------SCCCCCSSSC
T ss_pred hcceeEEEEeCCcCCHH---------HHHH-HH-HhcccCceeEEEeeCCEec-----------------cchhhhhhhc
Confidence 34577777777775410 0000 00 1122345777777766665 3566666 7
Q ss_pred CCCCCCEEecccCcCcccCCh---hhhhCCCCCcEEEeecCcccccCCccccCCCCCCEEEccccccCC---CCCcCccc
Q 041479 169 NITSMEYFHVSENQLVGELPP---HIGFTLPNVRILLLAGNQFFGNIPHSISNASKLEWLDFANNSLTG---LIPEDLDS 242 (771)
Q Consensus 169 ~l~~L~~L~Ls~N~l~g~lp~---~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~---~~p~~~~~ 242 (771)
.+++|++|+|++|.+++..|. ..+..+++|++|+|++|+|++..|..|..+++|++|+|++|++.+ ..+.. .
T Consensus 115 ~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~--~ 192 (310)
T 4glp_A 115 TGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAAL--C 192 (310)
T ss_dssp CCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTS--C
T ss_pred cCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHH--h
Confidence 889999999999999865551 222368899999999999998888899999999999999998765 22221 1
Q ss_pred ccCCCCCcEEEccCccccccCChh----hhhcccccceeecccCcCcccCccccccc---CCcceEecCCccceeccCcc
Q 041479 243 LVNCTYLEVVSLSVNSLSGTLPNS----LANFSSHLRYLYMSANPISGSIPTEIGNL---KNLIIIAIEKFILIRNIPIS 315 (771)
Q Consensus 243 l~~l~~L~~L~Ls~N~l~~~~p~~----~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l---~~L~~L~l~~n~l~~~~p~~ 315 (771)
+..+++|++|+|++|+++ .+|.. +..+. +|++|+|++|+|++..|..+..+ ++|+.|++++|.+. .+|..
T Consensus 193 ~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~-~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~ 269 (310)
T 4glp_A 193 PHKFPAIQNLALRNTGME-TPTGVCAALAAAGV-QPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKG 269 (310)
T ss_dssp TTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHTC-CCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSC
T ss_pred hhcCCCCCEEECCCCCCC-chHHHHHHHHhcCC-CCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhh
Confidence 256788999999999987 33332 23444 79999999999987777777666 57777777777776 45655
Q ss_pred ccCCCCCCEEEccCCcccccCCcccccccccccccccCccce
Q 041479 316 VGYLLKLQVLSLFENNISREIPSSLGNFTFLTELNLCGNSIR 357 (771)
Q Consensus 316 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 357 (771)
+. ++|++|+|++|+|++. |. +..+++|+.|+|++|+|+
T Consensus 270 ~~--~~L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~ 307 (310)
T 4glp_A 270 LP--AKLRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFL 307 (310)
T ss_dssp CC--SCCSCEECCSCCCCSC-CC-TTSCCCCSCEECSSTTTS
T ss_pred hc--CCCCEEECCCCcCCCC-ch-hhhCCCccEEECcCCCCC
Confidence 53 6777777777777743 33 566677777777777775
No 338
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.89 E-value=5.9e-24 Score=225.32 Aligned_cols=232 Identities=16% Similarity=0.165 Sum_probs=118.5
Q ss_pred CCcEEEcCCCcccccC-C--ccccCCCCCCEEecccCcCcccCCcccccCCcccccCCccc--cCCCCCCEEecccccCc
Q 041479 69 FLRLINLQQNNFSSNI-P--HEIGRLFRLRHIIFNSNALQGQIPDSRLILNKLEGNIPSEL--GSLLKFKGLGLANNYFT 143 (771)
Q Consensus 69 ~L~~L~Ls~N~l~~~~-p--~~~~~l~~L~~L~Ls~N~l~~~~p~~~l~~n~l~~~~p~~~--~~l~~L~~L~Ls~N~l~ 143 (771)
.++.|.++++.++... . ..+..+++|++|++++|.++ +..|..+ ..+++|++|+|++|+++
T Consensus 65 ~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~--------------~~~~~~~~~~~~~~L~~L~Ls~n~i~ 130 (310)
T 4glp_A 65 RVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKIT--------------GTMPPLPLEATGLALSSLRLRNVSWA 130 (310)
T ss_dssp CCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCB--------------SCCCCCSSSCCCBCCSSCEEESCCCS
T ss_pred ceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEec--------------cchhhhhhhccCCCCCEEEeeccccc
Confidence 4677777777765311 1 01223466888888888754 3455555 77778888888888777
Q ss_pred CCCCccceeeecccccccccCccccCCCCCCEEecccCcCcccCChhhhhCCCCCcEEEeecCccccc---C-CccccCC
Q 041479 144 GPIPHLNMFQVSVYSLTGSIPIQLLNITSMEYFHVSENQLVGELPPHIGFTLPNVRILLLAGNQFFGN---I-PHSISNA 219 (771)
Q Consensus 144 ~~lp~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~---~-p~~~~~l 219 (771)
+..+.+. ...+..+++|++|+|++|+++ .+|+..+..+++|++|+|++|++.+. . +..+..+
T Consensus 131 ~~~~~~~-------------~~~~~~~~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l 196 (310)
T 4glp_A 131 TGRSWLA-------------ELQQWLKPGLKVLSIAQAHSP-AFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKF 196 (310)
T ss_dssp STTSSHH-------------HHHTTBCSCCCEEEEECCSSC-CCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSS
T ss_pred chhhhhH-------------HHHhhhccCCCEEEeeCCCcc-hhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcC
Confidence 5322100 012234455555555555554 23322222455555555555554421 1 1122445
Q ss_pred CCCCEEEccccccCCCCCcCcccccCCCCCcEEEccCccccccCChhhhhcc--cccceeecccCcCcccCcccccccCC
Q 041479 220 SKLEWLDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSLSGTLPNSLANFS--SHLRYLYMSANPISGSIPTEIGNLKN 297 (771)
Q Consensus 220 ~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~--~~L~~L~Ls~N~l~~~~p~~~~~l~~ 297 (771)
++|++|+|++|+|+...+....-+.++++|++|+|++|++++..|..+..+. ++|++|+|++|+|+ .+|..+. ++
T Consensus 197 ~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~--~~ 273 (310)
T 4glp_A 197 PAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP--AK 273 (310)
T ss_dssp CCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC--SC
T ss_pred CCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc--CC
Confidence 5555555555555422111000013445555555555555544444444331 24555555555555 3444442 45
Q ss_pred cceEecCCccceeccCccccCCCCCCEEEccCCccc
Q 041479 298 LIIIAIEKFILIRNIPISVGYLLKLQVLSLFENNIS 333 (771)
Q Consensus 298 L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 333 (771)
|+.|++++|.+.+. |. +..+++|+.|+|++|.++
T Consensus 274 L~~L~Ls~N~l~~~-~~-~~~l~~L~~L~L~~N~l~ 307 (310)
T 4glp_A 274 LRVLDLSSNRLNRA-PQ-PDELPEVDNLTLDGNPFL 307 (310)
T ss_dssp CSCEECCSCCCCSC-CC-TTSCCCCSCEECSSTTTS
T ss_pred CCEEECCCCcCCCC-ch-hhhCCCccEEECcCCCCC
Confidence 55555555555432 22 455667777777777775
No 339
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.89 E-value=1.9e-25 Score=244.54 Aligned_cols=250 Identities=19% Similarity=0.210 Sum_probs=121.8
Q ss_pred CCccccCCCCCcEEEcCCCcccccC----CccccCCCCCCEEecccCcCcccCCcccccCCcccccCCccc-------cC
Q 041479 60 ASPYIGNLTFLRLINLQQNNFSSNI----PHEIGRLFRLRHIIFNSNALQGQIPDSRLILNKLEGNIPSEL-------GS 128 (771)
Q Consensus 60 ~~~~~~~l~~L~~L~Ls~N~l~~~~----p~~~~~l~~L~~L~Ls~N~l~~~~p~~~l~~n~l~~~~p~~~-------~~ 128 (771)
++..+..+++|++|+|++|.|++.. +..|..+++|++|+|++|.+. .+.+.+|..+ ..
T Consensus 24 l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~-----------~l~~~~~~~~~~l~~~l~~ 92 (386)
T 2ca6_A 24 VFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTG-----------RVKDEIPEALRLLLQALLK 92 (386)
T ss_dssp TSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTT-----------SCGGGSHHHHHHHHHHHTT
T ss_pred HHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccC-----------ccccchhHHHHHHHHHHhh
Confidence 4455666777777777777776543 333667777777777776432 2333333333 45
Q ss_pred CCCCCEEecccccCcCCCCccceeeecccccccccCccccCCCCCCEEecccCcCcccCChhhhh---CC---------C
Q 041479 129 LLKFKGLGLANNYFTGPIPHLNMFQVSVYSLTGSIPIQLLNITSMEYFHVSENQLVGELPPHIGF---TL---------P 196 (771)
Q Consensus 129 l~~L~~L~Ls~N~l~~~lp~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~---~l---------~ 196 (771)
+++|++|+|++|+|++.- ...+|..+..+++|++|+|++|.+++..+..+.. .+ +
T Consensus 93 ~~~L~~L~Ls~n~l~~~~-------------~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~ 159 (386)
T 2ca6_A 93 CPKLHTVRLSDNAFGPTA-------------QEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAP 159 (386)
T ss_dssp CTTCCEEECCSCCCCTTT-------------HHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred CCcccEEECCCCcCCHHH-------------HHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCC
Confidence 566666666666554100 0023444555556666666666554222222211 11 4
Q ss_pred CCcEEEeecCccc-ccCC---ccccCCCCCCEEEccccccCCCCCcCcccccCCCCCcEEEccCccccc---cCChhhhh
Q 041479 197 NVRILLLAGNQFF-GNIP---HSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSLSG---TLPNSLAN 269 (771)
Q Consensus 197 ~L~~L~L~~N~l~-~~~p---~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~---~~p~~~~~ 269 (771)
+|++|+|++|+|+ +.+| ..|..+++|++|+|++|+|+.. | .+|..+..
T Consensus 160 ~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~-------------------------g~~~l~~~~l~~ 214 (386)
T 2ca6_A 160 PLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPE-------------------------GIEHLLLEGLAY 214 (386)
T ss_dssp CCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHH-------------------------HHHHHHHTTGGG
T ss_pred CCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHh-------------------------HHHHHHHHHhhc
Confidence 4444444444443 1122 2333444444444444444310 1 11212333
Q ss_pred cccccceeecccCcCc----ccCcccccccCCcceEecCCccceec----cCccc--cCCCCCCEEEccCCcccc----c
Q 041479 270 FSSHLRYLYMSANPIS----GSIPTEIGNLKNLIIIAIEKFILIRN----IPISV--GYLLKLQVLSLFENNISR----E 335 (771)
Q Consensus 270 l~~~L~~L~Ls~N~l~----~~~p~~~~~l~~L~~L~l~~n~l~~~----~p~~~--~~l~~L~~L~Ls~N~l~~----~ 335 (771)
++ +|++|+|++|.|+ +.+|..+..+++|+.|++++|.+.+. +|..+ +.+++|+.|+|++|.++. .
T Consensus 215 ~~-~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~ 293 (386)
T 2ca6_A 215 CQ-ELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRT 293 (386)
T ss_dssp CT-TCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHH
T ss_pred CC-CccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHH
Confidence 32 3444444444443 23344444444444444444444332 33444 236666667777776665 3
Q ss_pred CCccc-ccccccccccccCccceec
Q 041479 336 IPSSL-GNFTFLTELNLCGNSIRGS 359 (771)
Q Consensus 336 ~p~~~-~~l~~L~~L~Ls~N~l~~~ 359 (771)
+|..+ .++++|++|+|++|++++.
T Consensus 294 l~~~l~~~l~~L~~L~l~~N~l~~~ 318 (386)
T 2ca6_A 294 LKTVIDEKMPDLLFLELNGNRFSEE 318 (386)
T ss_dssp HHHHHHHHCTTCCEEECTTSBSCTT
T ss_pred HHHHHHhcCCCceEEEccCCcCCcc
Confidence 55555 4466666666666666643
No 340
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.89 E-value=1.1e-23 Score=239.17 Aligned_cols=210 Identities=22% Similarity=0.324 Sum_probs=158.4
Q ss_pred CCCCCCCCCCCc-----cceee-eecCCCCcEEEEEcCCCCCcccCCccccCCCCCcEEEcCCCcccccCCccccCCCCC
Q 041479 21 ALSTWNDSVNFC-----QWLGV-TCSLKYQRVILLNLSGQNLTGTASPYIGNLTFLRLINLQQNNFSSNIPHEIGRLFRL 94 (771)
Q Consensus 21 ~~~~w~~~~~~c-----~w~~v-~c~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 94 (771)
.+.+|....++| .|.|+ .|.. .+++.|+|++|+|++ +|+.+ +++|++|+|++|+|+ .+| ..+++|
T Consensus 32 ~l~~W~~~~~~~~~~~~~~~~l~~C~~--~~L~~L~Ls~n~L~~-lp~~l--~~~L~~L~Ls~N~l~-~ip---~~l~~L 102 (571)
T 3cvr_A 32 AWDKWEKQALPGENRNEAVSLLKECLI--NQFSELQLNRLNLSS-LPDNL--PPQITVLEITQNALI-SLP---ELPASL 102 (571)
T ss_dssp HHHHHHTTCCTTCCHHHHHHHHHHHHH--TTCSEEECCSSCCSC-CCSCC--CTTCSEEECCSSCCS-CCC---CCCTTC
T ss_pred HHHHHhccCCccccccchhhhcccccc--CCccEEEeCCCCCCc-cCHhH--cCCCCEEECcCCCCc-ccc---cccCCC
Confidence 456786667788 79999 7865 589999999999997 56655 388999999999999 477 557999
Q ss_pred CEEecccCcCcccCCcccccCCcccccCCccccCCCCCCEEecccccCcCCCCccceeeecccccccccCccccCCCCCC
Q 041479 95 RHIIFNSNALQGQIPDSRLILNKLEGNIPSELGSLLKFKGLGLANNYFTGPIPHLNMFQVSVYSLTGSIPIQLLNITSME 174 (771)
Q Consensus 95 ~~L~Ls~N~l~~~~p~~~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~L~~l~l~~n~l~~~~p~~~~~l~~L~ 174 (771)
++|+|++|+|++ +|. +.+ +|+.|+|++|+|++ +|. .+++|+
T Consensus 103 ~~L~Ls~N~l~~---------------ip~-l~~--~L~~L~Ls~N~l~~------------------lp~---~l~~L~ 143 (571)
T 3cvr_A 103 EYLDACDNRLST---------------LPE-LPA--SLKHLDVDNNQLTM------------------LPE---LPALLE 143 (571)
T ss_dssp CEEECCSSCCSC---------------CCC-CCT--TCCEEECCSSCCSC------------------CCC---CCTTCC
T ss_pred CEEEccCCCCCC---------------cch-hhc--CCCEEECCCCcCCC------------------CCC---cCcccc
Confidence 999999999762 455 544 88888888888873 344 578889
Q ss_pred EEecccCcCcccCChhhhhCCCCCcEEEeecCcccccCCccccCCCCCCEEEccccccCCCCCcCcccccCCCCC-----
Q 041479 175 YFHVSENQLVGELPPHIGFTLPNVRILLLAGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYL----- 249 (771)
Q Consensus 175 ~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L----- 249 (771)
.|+|++|+|+ .+|. .+++|+.|+|++|+|++ +|. |. ++|+.|+|++|+|+.+ |. |. . +|
T Consensus 144 ~L~Ls~N~l~-~lp~----~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~~l-p~-~~---~--~L~~~~~ 207 (571)
T 3cvr_A 144 YINADNNQLT-MLPE----LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLESL-PA-VP---V--RNHHSEE 207 (571)
T ss_dssp EEECCSSCCS-CCCC----CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCSSC-CC-CC-------------
T ss_pred EEeCCCCccC-cCCC----cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCCch-hh-HH---H--hhhcccc
Confidence 9999999988 5776 46788889999998886 555 65 8888888888888844 43 42 2 44
Q ss_pred --cEEEccCccccccCChhhhhcccccceeecccCcCcccCcccccccC
Q 041479 250 --EVVSLSVNSLSGTLPNSLANFSSHLRYLYMSANPISGSIPTEIGNLK 296 (771)
Q Consensus 250 --~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~ 296 (771)
+.|+|++|+|+ .+|..++.+. +|+.|+|++|+|++.+|..|..+.
T Consensus 208 ~L~~L~Ls~N~l~-~lp~~l~~l~-~L~~L~L~~N~l~~~~p~~l~~l~ 254 (571)
T 3cvr_A 208 TEIFFRCRENRIT-HIPENILSLD-PTCTIILEDNPLSSRIRESLSQQT 254 (571)
T ss_dssp CCEEEECCSSCCC-CCCGGGGGSC-TTEEEECCSSSCCHHHHHHHHHHH
T ss_pred cceEEecCCCcce-ecCHHHhcCC-CCCEEEeeCCcCCCcCHHHHHHhh
Confidence 77777777777 5777666654 677777777777776666665543
No 341
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.89 E-value=4.9e-23 Score=211.20 Aligned_cols=180 Identities=20% Similarity=0.223 Sum_probs=153.7
Q ss_pred CCCEEecccCcCcccCChhhhhCCCCCcEEEeecCcccccCCccccCCCCCCEEEccccccCCCCCcCcccccCCCCCcE
Q 041479 172 SMEYFHVSENQLVGELPPHIGFTLPNVRILLLAGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEV 251 (771)
Q Consensus 172 ~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~ 251 (771)
+.++++++++.++ .+|..+. ++++.|+|++|+|++..+..|.++++|++|+|++|+|++..|..| .++++|++
T Consensus 15 ~~~~l~~~~~~l~-~~p~~~~---~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~---~~l~~L~~ 87 (251)
T 3m19_A 15 GKKEVDCQGKSLD-SVPSGIP---ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVF---DDLTELGT 87 (251)
T ss_dssp GGTEEECTTCCCS-SCCSCCC---TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTT---TTCTTCCE
T ss_pred CCeEEecCCCCcc-ccCCCCC---CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHh---ccCCcCCE
Confidence 5678899999998 8887654 689999999999998888889999999999999999998877666 77889999
Q ss_pred EEccCccccccCChhhhhcccccceeecccCcCcccCcccccccCCcceEecCCccceeccCccccCCCCCCEEEccCCc
Q 041479 252 VSLSVNSLSGTLPNSLANFSSHLRYLYMSANPISGSIPTEIGNLKNLIIIAIEKFILIRNIPISVGYLLKLQVLSLFENN 331 (771)
Q Consensus 252 L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~ 331 (771)
|+|++|++++..+..+..+. +|++|+|++|+|++..+..|..+++|+.|++++|.+.+..+..|..+++|++|+|++|+
T Consensus 88 L~L~~n~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 166 (251)
T 3m19_A 88 LGLANNQLASLPLGVFDHLT-QLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQ 166 (251)
T ss_dssp EECTTSCCCCCCTTTTTTCT-TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EECCCCcccccChhHhcccC-CCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCc
Confidence 99999999855555566665 79999999999997777778889999999999998887777788889999999999999
Q ss_pred ccccCCcccccccccccccccCccceec
Q 041479 332 ISREIPSSLGNFTFLTELNLCGNSIRGS 359 (771)
Q Consensus 332 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 359 (771)
+++..+..|..+++|++|+|++|++...
T Consensus 167 l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 167 LQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 9877777888999999999999998753
No 342
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.88 E-value=1.3e-22 Score=218.88 Aligned_cols=238 Identities=20% Similarity=0.207 Sum_probs=148.1
Q ss_pred CEEecccCcCcccCChhhhhCCCCCcEEEeecCcccccCCccccCCCCCCEEEccccccCCCCC-cCcccccCCCCCcE-
Q 041479 174 EYFHVSENQLVGELPPHIGFTLPNVRILLLAGNQFFGNIPHSISNASKLEWLDFANNSLTGLIP-EDLDSLVNCTYLEV- 251 (771)
Q Consensus 174 ~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~l~~L~~- 251 (771)
++++.++|+++ ++|..+. ++++.|+|++|+|+.+.+++|.++++|++|+|++|++.+.+| .+| .++++|..
T Consensus 12 ~~v~C~~~~Lt-~iP~~l~---~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f---~~L~~l~~~ 84 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDLP---RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVF---SNLPKLHEI 84 (350)
T ss_dssp TEEEEESTTCC-SCCTTCC---TTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSB---CSCTTCCEE
T ss_pred CEEEecCCCCC-ccCcCcC---CCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHh---hcchhhhhh
Confidence 46777888887 7887653 578888888888887666778888888888888888765444 334 56666554
Q ss_pred EEccCccccccCChhhhhcccccceeecccCcCcccCcccccccCCcceEecCCc-cceeccCccccCCC-CCCEEEccC
Q 041479 252 VSLSVNSLSGTLPNSLANFSSHLRYLYMSANPISGSIPTEIGNLKNLIIIAIEKF-ILIRNIPISVGYLL-KLQVLSLFE 329 (771)
Q Consensus 252 L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n-~l~~~~p~~~~~l~-~L~~L~Ls~ 329 (771)
+.++.|+|+...|..|..+. +|++|++++|+|++..+..+....++..+++.++ .+....+..|..+. .++.|+|++
T Consensus 85 l~~~~N~l~~l~~~~f~~l~-~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~ 163 (350)
T 4ay9_X 85 RIEKANNLLYINPEAFQNLP-NLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNK 163 (350)
T ss_dssp EEEEETTCCEECTTSBCCCT-TCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCS
T ss_pred hcccCCcccccCchhhhhcc-ccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhcccc
Confidence 56666777755555566654 6888888888887666666666666777776553 34343344555543 466677777
Q ss_pred CcccccCCcccccccccccccccC-ccceecCCcccccccce-eeecccCcccCCCCcCCCCCCCCCeEECCCC-ccccc
Q 041479 330 NNISREIPSSLGNFTFLTELNLCG-NSIRGSVPSALGSCHQL-WLDLSHNHLTGPIPLAVGNPKSIPHLDLSKN-ELSGE 406 (771)
Q Consensus 330 N~l~~~~p~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~l-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N-~l~~~ 406 (771)
|+|+. +|......++|+.|++++ |.++.+.+..|..++.| .|||++|+|+...+..|. +|+.|.+.++ .++ .
T Consensus 164 N~i~~-i~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~N~l~~lp~~~~~---~L~~L~~l~~~~l~-~ 238 (350)
T 4ay9_X 164 NGIQE-IHNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLE---NLKKLRARSTYNLK-K 238 (350)
T ss_dssp SCCCE-ECTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEECTTSCCCCCCSSSCT---TCCEEECTTCTTCC-C
T ss_pred ccccC-CChhhccccchhHHhhccCCcccCCCHHHhccCcccchhhcCCCCcCccChhhhc---cchHhhhccCCCcC-c
Confidence 77764 333333445667777653 55654444556666666 677777776654444443 3334443332 233 4
Q ss_pred CCcchhhhhcccccccEEECcCC
Q 041479 407 IPSSLAWIFGYISIFAKLNLSYN 429 (771)
Q Consensus 407 ~p~~l~~~~~~l~~L~~L~Ls~N 429 (771)
+|. + ..+++|+.++++++
T Consensus 239 lP~-l----~~l~~L~~l~l~~~ 256 (350)
T 4ay9_X 239 LPT-L----EKLVALMEASLTYP 256 (350)
T ss_dssp CCC-T----TTCCSCCEEECSCH
T ss_pred CCC-c----hhCcChhhCcCCCC
Confidence 453 2 25666666666543
No 343
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.88 E-value=3.4e-22 Score=215.49 Aligned_cols=198 Identities=16% Similarity=0.150 Sum_probs=90.1
Q ss_pred cEEEcCCCcccccCCccccCCCCCCEEecccCcCcccCCcccccCCcccccCCccccCCCCCCEEecccccCcCCCCccc
Q 041479 71 RLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNALQGQIPDSRLILNKLEGNIPSELGSLLKFKGLGLANNYFTGPIPHLN 150 (771)
Q Consensus 71 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~L~ 150 (771)
++++-++|+++. +|..+ .+++++|+|++|+|+ ...+..|.++++|++|+|++|++.+
T Consensus 12 ~~v~C~~~~Lt~-iP~~l--~~~l~~L~Ls~N~i~--------------~i~~~~f~~l~~L~~L~Ls~N~i~~------ 68 (350)
T 4ay9_X 12 RVFLCQESKVTE-IPSDL--PRNAIELRFVLTKLR--------------VIQKGAFSGFGDLEKIEISQNDVLE------ 68 (350)
T ss_dssp TEEEEESTTCCS-CCTTC--CTTCSEEEEESCCCS--------------EECTTSSTTCTTCCEEEEECCTTCC------
T ss_pred CEEEecCCCCCc-cCcCc--CCCCCEEEccCCcCC--------------CcCHHHHcCCCCCCEEECcCCCCCC------
Confidence 455666666663 56555 245666666666644 1122345555555555555555432
Q ss_pred eeeecccccccccC-ccccCCCCCCE-EecccCcCcccCChhhhhCCCCCcEEEeecCcccccCCccccCCCCCCEEEcc
Q 041479 151 MFQVSVYSLTGSIP-IQLLNITSMEY-FHVSENQLVGELPPHIGFTLPNVRILLLAGNQFFGNIPHSISNASKLEWLDFA 228 (771)
Q Consensus 151 ~l~l~~n~l~~~~p-~~~~~l~~L~~-L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 228 (771)
.+| ..|.+++++.+ +.++.|+++ .+|+..+..+++|++|++++|+|++..+..+....++..|+++
T Consensus 69 -----------~i~~~~f~~L~~l~~~l~~~~N~l~-~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~ 136 (350)
T 4ay9_X 69 -----------VIEADVFSNLPKLHEIRIEKANNLL-YINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQ 136 (350)
T ss_dssp -----------EECTTSBCSCTTCCEEEEEEETTCC-EECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEE
T ss_pred -----------ccChhHhhcchhhhhhhcccCCccc-ccCchhhhhccccccccccccccccCCchhhcccchhhhhhhc
Confidence 111 23444444433 334445554 3444443345555555555555554444444444444455543
Q ss_pred c-cccCCCCCcCcccccCC-CCCcEEEccCccccccCChhhhhcccccceeeccc-CcCcccCcccccccCCcceEecCC
Q 041479 229 N-NSLTGLIPEDLDSLVNC-TYLEVVSLSVNSLSGTLPNSLANFSSHLRYLYMSA-NPISGSIPTEIGNLKNLIIIAIEK 305 (771)
Q Consensus 229 ~-N~l~~~~p~~~~~l~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~l~~ 305 (771)
+ |+++.+.+..| ..+ ..++.|+|++|+|+ .+|...+... +|+.|++++ |.++.+.++.|.++++|+.|++++
T Consensus 137 ~~~~i~~l~~~~f---~~~~~~l~~L~L~~N~i~-~i~~~~f~~~-~L~~l~l~~~n~l~~i~~~~f~~l~~L~~LdLs~ 211 (350)
T 4ay9_X 137 DNINIHTIERNSF---VGLSFESVILWLNKNGIQ-EIHNSAFNGT-QLDELNLSDNNNLEELPNDVFHGASGPVILDISR 211 (350)
T ss_dssp SCTTCCEECTTSS---TTSBSSCEEEECCSSCCC-EECTTSSTTE-EEEEEECTTCTTCCCCCTTTTTTEECCSEEECTT
T ss_pred cccccccccccch---hhcchhhhhhcccccccc-CCChhhcccc-chhHHhhccCCcccCCCHHHhccCcccchhhcCC
Confidence 3 34443333333 222 23444455555554 3333333332 344444442 333322223344444444444444
Q ss_pred ccc
Q 041479 306 FIL 308 (771)
Q Consensus 306 n~l 308 (771)
|++
T Consensus 212 N~l 214 (350)
T 4ay9_X 212 TRI 214 (350)
T ss_dssp SCC
T ss_pred CCc
Confidence 444
No 344
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.88 E-value=2.1e-24 Score=236.29 Aligned_cols=250 Identities=18% Similarity=0.183 Sum_probs=144.0
Q ss_pred ccCccccCCCCCCEEecccCcCcccCChhh---hhCCCCCcEEEeecC---cccccCCccc-------cCCCCCCEEEcc
Q 041479 162 SIPIQLLNITSMEYFHVSENQLVGELPPHI---GFTLPNVRILLLAGN---QFFGNIPHSI-------SNASKLEWLDFA 228 (771)
Q Consensus 162 ~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~---~~~l~~L~~L~L~~N---~l~~~~p~~~-------~~l~~L~~L~Ls 228 (771)
.++..+..+++|+.|+|++|.+++..+..+ +..+++|++|+|++| ++++.+|..+ ..+++|++|+|+
T Consensus 23 ~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls 102 (386)
T 2ca6_A 23 SVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLS 102 (386)
T ss_dssp TTSHHHHHCSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECC
T ss_pred HHHHHHhcCCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECC
Confidence 455566677788888888888774433221 225777888888775 4444445444 567777778887
Q ss_pred ccccCCC----CCcCcccccCCCCCcEEEccCccccccCChhhhhcc------------cccceeecccCcCc-ccCc--
Q 041479 229 NNSLTGL----IPEDLDSLVNCTYLEVVSLSVNSLSGTLPNSLANFS------------SHLRYLYMSANPIS-GSIP-- 289 (771)
Q Consensus 229 ~N~l~~~----~p~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~------------~~L~~L~Ls~N~l~-~~~p-- 289 (771)
+|.++.. +|..+ ..+++|++|+|++|.+++..+..+.... ++|++|+|++|+|+ +.+|
T Consensus 103 ~n~l~~~~~~~l~~~l---~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l 179 (386)
T 2ca6_A 103 DNAFGPTAQEPLIDFL---SKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEW 179 (386)
T ss_dssp SCCCCTTTHHHHHHHH---HHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHH
T ss_pred CCcCCHHHHHHHHHHH---HhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHH
Confidence 7777752 33333 5667777777777777644333333221 25677777777665 2233
Q ss_pred -ccccccCCcceEecCCcccee-----ccCccccCCCCCCEEEccCCccc----ccCCcccccccccccccccCccceec
Q 041479 290 -TEIGNLKNLIIIAIEKFILIR-----NIPISVGYLLKLQVLSLFENNIS----REIPSSLGNFTFLTELNLCGNSIRGS 359 (771)
Q Consensus 290 -~~~~~l~~L~~L~l~~n~l~~-----~~p~~~~~l~~L~~L~Ls~N~l~----~~~p~~~~~l~~L~~L~Ls~N~l~~~ 359 (771)
..+..+++|+.|++++|.+.. ..|..+..+++|+.|+|++|.++ ..+|..+..+++|++|+|++|.|++.
T Consensus 180 ~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~ 259 (386)
T 2ca6_A 180 AKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSAR 259 (386)
T ss_dssp HHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHH
T ss_pred HHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchh
Confidence 344455555556555555541 22334555555555555555553 33444555555555555555555432
Q ss_pred CCcccccccceeeecccCcccCCCCcCC--CCCCCCCeEECCCCcccc----cCCcchhhhhcccccccEEECcCCCCCC
Q 041479 360 VPSALGSCHQLWLDLSHNHLTGPIPLAV--GNPKSIPHLDLSKNELSG----EIPSSLAWIFGYISIFAKLNLSYNNLDG 433 (771)
Q Consensus 360 ~p~~~~~l~~l~L~Ls~N~l~~~~p~~~--~~l~~L~~L~Ls~N~l~~----~~p~~l~~~~~~l~~L~~L~Ls~N~l~~ 433 (771)
... .+|..+ +.+++|++|+|++|+|++ .+|..+. ..+++|+.|+|++|++++
T Consensus 260 ~~~-------------------~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~---~~l~~L~~L~l~~N~l~~ 317 (386)
T 2ca6_A 260 GAA-------------------AVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVID---EKMPDLLFLELNGNRFSE 317 (386)
T ss_dssp HHH-------------------HHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHH---HHCTTCCEEECTTSBSCT
T ss_pred hHH-------------------HHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHH---hcCCCceEEEccCCcCCc
Confidence 100 023333 336777778888887775 3555431 256777888888887775
Q ss_pred CCC
Q 041479 434 DVP 436 (771)
Q Consensus 434 ~~p 436 (771)
..|
T Consensus 318 ~~~ 320 (386)
T 2ca6_A 318 EDD 320 (386)
T ss_dssp TSH
T ss_pred chh
Confidence 543
No 345
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.88 E-value=2.1e-25 Score=258.61 Aligned_cols=182 Identities=18% Similarity=0.196 Sum_probs=101.6
Q ss_pred CCCCCcEEEccCccccccCChh-hhhcccccceeecccCcCccc-CcccccccCCcceEecC---------CccceeccC
Q 041479 245 NCTYLEVVSLSVNSLSGTLPNS-LANFSSHLRYLYMSANPISGS-IPTEIGNLKNLIIIAIE---------KFILIRNIP 313 (771)
Q Consensus 245 ~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~l~---------~n~l~~~~p 313 (771)
.+++|+.|++++|.+++..... +..+ ++|+.|++++| +... ++.....+++|+.|++. .+.+.....
T Consensus 287 ~~~~L~~L~L~~~~l~~~~l~~~~~~~-~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l 364 (594)
T 2p1m_B 287 VCSRLTTLNLSYATVQSYDLVKLLCQC-PKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGL 364 (594)
T ss_dssp HHTTCCEEECTTCCCCHHHHHHHHTTC-TTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHH
T ss_pred hhCCCCEEEccCCCCCHHHHHHHHhcC-CCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHH
Confidence 4567777777777765432222 2233 36777777776 3321 22223346777777762 233332222
Q ss_pred cccc-CCCCCCEEEccCCcccccCCcccc-ccccccccccc--C----ccceecC-----Ccccccccce-eeecccCcc
Q 041479 314 ISVG-YLLKLQVLSLFENNISREIPSSLG-NFTFLTELNLC--G----NSIRGSV-----PSALGSCHQL-WLDLSHNHL 379 (771)
Q Consensus 314 ~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls--~----N~l~~~~-----p~~~~~l~~l-~L~Ls~N~l 379 (771)
..+. .+++|+.|+++.|+++...+..+. .+++|+.|+++ + |.+++.. +..+..++.| .|++++ ++
T Consensus 365 ~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l 443 (594)
T 2p1m_B 365 VSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LL 443 (594)
T ss_dssp HHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SC
T ss_pred HHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cc
Confidence 2222 367777777777777655444443 46777777777 3 4554211 1124455666 677765 55
Q ss_pred cCCCCcCCCC-CCCCCeEECCCCcccccCCcchhhhhcccccccEEECcCCCCC
Q 041479 380 TGPIPLAVGN-PKSIPHLDLSKNELSGEIPSSLAWIFGYISIFAKLNLSYNNLD 432 (771)
Q Consensus 380 ~~~~p~~~~~-l~~L~~L~Ls~N~l~~~~p~~l~~~~~~l~~L~~L~Ls~N~l~ 432 (771)
++..+..+.. +++|+.|+|++|.+++..+..+ ...+++|+.|+|++|+++
T Consensus 444 ~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l---~~~~~~L~~L~L~~n~~~ 494 (594)
T 2p1m_B 444 TDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHV---LSGCDSLRKLEIRDCPFG 494 (594)
T ss_dssp CHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHH---HHHCTTCCEEEEESCSCC
T ss_pred cHHHHHHHHHhchhccEeeccCCCCcHHHHHHH---HhcCCCcCEEECcCCCCc
Confidence 5443333333 6777777777777764333322 235677777888777774
No 346
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.88 E-value=5.1e-22 Score=210.04 Aligned_cols=172 Identities=22% Similarity=0.366 Sum_probs=94.6
Q ss_pred ccCCCCCcEEEcCCCcccccCCccccCCCCCCEEecccCcCcccCCcccccCCcccccCCccccCCCCCCEEecccccCc
Q 041479 64 IGNLTFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNALQGQIPDSRLILNKLEGNIPSELGSLLKFKGLGLANNYFT 143 (771)
Q Consensus 64 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 143 (771)
+..+++|++|++++|.++. +| .+..+++|++|+|++|.++ .++. +..+++|+.|+|++|+++
T Consensus 37 ~~~l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~---------------~~~~-~~~l~~L~~L~L~~n~l~ 98 (308)
T 1h6u_A 37 QADLDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQIT---------------DLAP-LKNLTKITELELSGNPLK 98 (308)
T ss_dssp HHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCC---------------CCGG-GTTCCSCCEEECCSCCCS
T ss_pred HHHcCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCC---------------CChh-HccCCCCCEEEccCCcCC
Confidence 3456666666666666664 34 4666666666666666654 2222 555666666666666555
Q ss_pred CCCCccceeeecccccccccCccccCCCCCCEEecccCcCcccCChhhhhCCCCCcEEEeecCcccccCCccccCCCCCC
Q 041479 144 GPIPHLNMFQVSVYSLTGSIPIQLLNITSMEYFHVSENQLVGELPPHIGFTLPNVRILLLAGNQFFGNIPHSISNASKLE 223 (771)
Q Consensus 144 ~~lp~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 223 (771)
+ ++ .+..+++|++|++++|+++ .+|. + ..+++|+.|++++|++++..+ +..+++|+
T Consensus 99 ~------------------~~-~~~~l~~L~~L~l~~n~l~-~~~~-l-~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~ 154 (308)
T 1h6u_A 99 N------------------VS-AIAGLQSIKTLDLTSTQIT-DVTP-L-AGLSNLQVLYLDLNQITNISP--LAGLTNLQ 154 (308)
T ss_dssp C------------------CG-GGTTCTTCCEEECTTSCCC-CCGG-G-TTCTTCCEEECCSSCCCCCGG--GGGCTTCC
T ss_pred C------------------ch-hhcCCCCCCEEECCCCCCC-Cchh-h-cCCCCCCEEECCCCccCcCcc--ccCCCCcc
Confidence 2 11 3455566666666666665 3443 2 255666666666666654332 55566666
Q ss_pred EEEccccccCCCCCcCcccccCCCCCcEEEccCccccccCChhhhhcccccceeecccCcCc
Q 041479 224 WLDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSLSGTLPNSLANFSSHLRYLYMSANPIS 285 (771)
Q Consensus 224 ~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~ 285 (771)
.|++++|++++..+ +..+++|+.|++++|++++ ++. +..+. +|++|++++|+++
T Consensus 155 ~L~l~~n~l~~~~~-----l~~l~~L~~L~l~~n~l~~-~~~-l~~l~-~L~~L~L~~N~l~ 208 (308)
T 1h6u_A 155 YLSIGNAQVSDLTP-----LANLSKLTTLKADDNKISD-ISP-LASLP-NLIEVHLKNNQIS 208 (308)
T ss_dssp EEECCSSCCCCCGG-----GTTCTTCCEEECCSSCCCC-CGG-GGGCT-TCCEEECTTSCCC
T ss_pred EEEccCCcCCCChh-----hcCCCCCCEEECCCCccCc-Chh-hcCCC-CCCEEEccCCccC
Confidence 66666666654322 2455555666666665552 222 33333 4555555555555
No 347
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.87 E-value=1.8e-23 Score=224.29 Aligned_cols=215 Identities=20% Similarity=0.243 Sum_probs=141.6
Q ss_pred ccCCCCCCEEecccCcCccc-CChhhhhCCCCCcEEEeecCcccccCCccccCCCCCCEEEcccc-ccCCC-CCcCcccc
Q 041479 167 LLNITSMEYFHVSENQLVGE-LPPHIGFTLPNVRILLLAGNQFFGNIPHSISNASKLEWLDFANN-SLTGL-IPEDLDSL 243 (771)
Q Consensus 167 ~~~l~~L~~L~Ls~N~l~g~-lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N-~l~~~-~p~~~~~l 243 (771)
+..+++|++|++++|.+++. +|..+. .+++|++|+|++|++++..+..+..+++|++|+|++| .+++. .+..+
T Consensus 89 ~~~~~~L~~L~L~~~~l~~~~~~~~~~-~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~--- 164 (336)
T 2ast_B 89 HFSPFRVQHMDLSNSVIEVSTLHGILS-QCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLL--- 164 (336)
T ss_dssp CCCCBCCCEEECTTCEECHHHHHHHHT-TBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHH---
T ss_pred hccCCCCCEEEccCCCcCHHHHHHHHh-hCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHH---
Confidence 34566677777777776643 554443 6777777777777777667777777788888888887 56532 23223
Q ss_pred cCCCCCcEEEccCc-ccccc-CChhhhhcccccceeecccC--cCc-ccCcccccccCCcceEecCCcc-ceeccCcccc
Q 041479 244 VNCTYLEVVSLSVN-SLSGT-LPNSLANFSSHLRYLYMSAN--PIS-GSIPTEIGNLKNLIIIAIEKFI-LIRNIPISVG 317 (771)
Q Consensus 244 ~~l~~L~~L~Ls~N-~l~~~-~p~~~~~l~~~L~~L~Ls~N--~l~-~~~p~~~~~l~~L~~L~l~~n~-l~~~~p~~~~ 317 (771)
.++++|++|++++| .+++. ++..+..++.+|++|++++| .++ +.+|..+..+++|+.|++++|. +.+..+..+.
T Consensus 165 ~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~ 244 (336)
T 2ast_B 165 SSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFF 244 (336)
T ss_dssp HHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGG
T ss_pred hcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHh
Confidence 56778888888888 77753 55556665426888888888 454 4566677778888888888887 5556677777
Q ss_pred CCCCCCEEEccCCc-ccccCCcccccccccccccccCccceecCCccccccc-ce-eeecccCcccCCCCcCCCC
Q 041479 318 YLLKLQVLSLFENN-ISREIPSSLGNFTFLTELNLCGNSIRGSVPSALGSCH-QL-WLDLSHNHLTGPIPLAVGN 389 (771)
Q Consensus 318 ~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~l-~L~Ls~N~l~~~~p~~~~~ 389 (771)
.+++|++|++++|. ++......+..+++|+.|++++| ++ ...+..+. .+ .|++++|++++..|..++.
T Consensus 245 ~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~-i~---~~~~~~l~~~l~~L~l~~n~l~~~~~~~~~~ 315 (336)
T 2ast_B 245 QLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI-VP---DGTLQLLKEALPHLQINCSHFTTIARPTIGN 315 (336)
T ss_dssp GCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-SC---TTCHHHHHHHSTTSEESCCCSCCTTCSSCSS
T ss_pred CCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-cC---HHHHHHHHhhCcceEEecccCccccCCcccc
Confidence 88888888888884 32222225677788888888877 32 22333332 23 4556666666666655543
No 348
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.87 E-value=5.8e-22 Score=209.60 Aligned_cols=195 Identities=23% Similarity=0.344 Sum_probs=149.6
Q ss_pred ccCCCCCCEEecccccCcCCCCccceeeecccccccccCccccCCCCCCEEecccCcCcccCChhhhhCCCCCcEEEeec
Q 041479 126 LGSLLKFKGLGLANNYFTGPIPHLNMFQVSVYSLTGSIPIQLLNITSMEYFHVSENQLVGELPPHIGFTLPNVRILLLAG 205 (771)
Q Consensus 126 ~~~l~~L~~L~Ls~N~l~~~lp~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~ 205 (771)
+..+++|+.|++++|.++ .+| .+..+++|++|++++|+++ .+++ + ..+++|++|+|++
T Consensus 37 ~~~l~~L~~L~l~~~~i~------------------~l~-~~~~l~~L~~L~L~~n~i~-~~~~-~-~~l~~L~~L~L~~ 94 (308)
T 1h6u_A 37 QADLDGITTLSAFGTGVT------------------TIE-GVQYLNNLIGLELKDNQIT-DLAP-L-KNLTKITELELSG 94 (308)
T ss_dssp HHHHHTCCEEECTTSCCC------------------CCT-TGGGCTTCCEEECCSSCCC-CCGG-G-TTCCSCCEEECCS
T ss_pred HHHcCCcCEEEeeCCCcc------------------Cch-hhhccCCCCEEEccCCcCC-CChh-H-ccCCCCCEEEccC
Confidence 345667777777777665 233 4677888888888888888 5666 4 4888899999999
Q ss_pred CcccccCCccccCCCCCCEEEccccccCCCCCcCcccccCCCCCcEEEccCccccccCChhhhhcccccceeecccCcCc
Q 041479 206 NQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSLSGTLPNSLANFSSHLRYLYMSANPIS 285 (771)
Q Consensus 206 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~ 285 (771)
|+|++. +.+..+++|++|++++|+++++.+ +..+++|++|++++|++++ ++. +..+. +|++|++++|+++
T Consensus 95 n~l~~~--~~~~~l~~L~~L~l~~n~l~~~~~-----l~~l~~L~~L~l~~n~l~~-~~~-l~~l~-~L~~L~l~~n~l~ 164 (308)
T 1h6u_A 95 NPLKNV--SAIAGLQSIKTLDLTSTQITDVTP-----LAGLSNLQVLYLDLNQITN-ISP-LAGLT-NLQYLSIGNAQVS 164 (308)
T ss_dssp CCCSCC--GGGTTCTTCCEEECTTSCCCCCGG-----GTTCTTCCEEECCSSCCCC-CGG-GGGCT-TCCEEECCSSCCC
T ss_pred CcCCCc--hhhcCCCCCCEEECCCCCCCCchh-----hcCCCCCCEEECCCCccCc-Ccc-ccCCC-CccEEEccCCcCC
Confidence 888853 368888889999999998886532 4778888888999888884 443 66665 7888899888888
Q ss_pred ccCcccccccCCcceEecCCccceeccCccccCCCCCCEEEccCCcccccCCcccccccccccccccCcccee
Q 041479 286 GSIPTEIGNLKNLIIIAIEKFILIRNIPISVGYLLKLQVLSLFENNISREIPSSLGNFTFLTELNLCGNSIRG 358 (771)
Q Consensus 286 ~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 358 (771)
+..+ +..+++|+.|++++|.+.+..+ +..+++|++|+|++|++++.. .+..+++|+.|+|++|++++
T Consensus 165 ~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~--~l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 165 DLTP--LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp CCGG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCG--GGTTCTTCCEEEEEEEEEEC
T ss_pred CChh--hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCccc--cccCCCCCCEEEccCCeeec
Confidence 5433 8888888888888888865443 778888888888888888544 37888888888888888874
No 349
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.87 E-value=8.1e-22 Score=195.97 Aligned_cols=180 Identities=21% Similarity=0.220 Sum_probs=105.7
Q ss_pred ccceeeeecCCCCcEEEEEcCCCCCcccCCccccCCCCCcEEEcCCCcccccCCccccCCCCCCEEecccCcCcccCCcc
Q 041479 32 CQWLGVTCSLKYQRVILLNLSGQNLTGTASPYIGNLTFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNALQGQIPDS 111 (771)
Q Consensus 32 c~w~~v~c~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 111 (771)
|.|.+|.|.. +.++ .+|..+ .++|++|+|++|++++..+..|+++++|++|++++|+++
T Consensus 7 C~~~~v~c~~------------~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~------ 65 (208)
T 2o6s_A 7 CSGTTVECYS------------QGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQ------ 65 (208)
T ss_dssp EETTEEECCS------------SCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCC------
T ss_pred ECCCEEEecC------------CCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccC------
Confidence 7899998865 3454 334333 468999999999999776777888999999999988865
Q ss_pred cccCCcccccCCccccCCCCCCEEecccccCcCCCCccceeeecccccccccCccccCCCCCCEEecccCcCcccCChhh
Q 041479 112 RLILNKLEGNIPSELGSLLKFKGLGLANNYFTGPIPHLNMFQVSVYSLTGSIPIQLLNITSMEYFHVSENQLVGELPPHI 191 (771)
Q Consensus 112 ~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~ 191 (771)
+..+..|..+++|++|+|++|+|++ ..+..|.++++|++|++++|+++ .+|+..
T Consensus 66 --------~~~~~~~~~l~~L~~L~Ls~n~l~~-----------------~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~ 119 (208)
T 2o6s_A 66 --------SLPNGVFNKLTSLTYLNLSTNQLQS-----------------LPNGVFDKLTQLKELALNTNQLQ-SLPDGV 119 (208)
T ss_dssp --------CCCTTTTTTCTTCCEEECCSSCCCC-----------------CCTTTTTTCTTCCEEECCSSCCC-CCCTTT
T ss_pred --------ccChhhcCCCCCcCEEECCCCcCCc-----------------cCHhHhcCccCCCEEEcCCCcCc-ccCHhH
Confidence 2333345666666666666666552 12223455555666666655555 344443
Q ss_pred hhCCCCCcEEEeecCcccccCCccccCCCCCCEEEccccccCCCCCcCcccccCCCCCcEEEccCccccccCChhhh
Q 041479 192 GFTLPNVRILLLAGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSLSGTLPNSLA 268 (771)
Q Consensus 192 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~ 268 (771)
+..+++|++|++++|+|++..+..|..+++|+.|++++|.+.+ .+++|++|+++.|+++|.+|..++
T Consensus 120 ~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~----------~~~~l~~L~~~~n~~~g~ip~~~~ 186 (208)
T 2o6s_A 120 FDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDC----------TCPGIRYLSEWINKHSGVVRNSAG 186 (208)
T ss_dssp TTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCC----------CTTTTHHHHHHHHHCTTTBBCTTS
T ss_pred hccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeec----------CCCCHHHHHHHHHhCCceeeccCc
Confidence 3345555555555555554444445555555555555554432 223344444444444444444443
No 350
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.86 E-value=1.2e-22 Score=230.61 Aligned_cols=154 Identities=14% Similarity=0.093 Sum_probs=115.8
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeeccc--------hhhHHHHHHHHHHHhccCCCCceeEEEEeecCCCCCceeE
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLHQ--------RGALKSFMAECQALRNIRHRNLVKIITACSTSDFQGNYFR 598 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~--------~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~~~~~ 598 (771)
..+|+|.+|+||+|... ++.+|+|+..... ....+++.+|++++++++||||+++..++...+ ..
T Consensus 342 ~~LG~G~fg~Vy~~~~~--~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~-----~~ 414 (540)
T 3en9_A 342 HLIGKGAEADIKRDSYL--DFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLD-----NK 414 (540)
T ss_dssp ------CCEEEEEEECS--SCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETT-----TT
T ss_pred CEEeeCCCEEEEEEEEC--CCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCC-----cc
Confidence 46899999999999543 4589999874322 112456899999999999999995555544443 45
Q ss_pred EEEEEeccCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccC
Q 041479 599 ALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMS 678 (771)
Q Consensus 599 ~lv~e~~~~g~L~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~ 678 (771)
|+|||||++|+|.++... +..++.|+++||+|||+. +|+||||||+|||++. .+||+|||+|+.......
T Consensus 415 ~lVmE~~~ggsL~~~l~~-----~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~ 484 (540)
T 3en9_A 415 RIMMSYINGKLAKDVIED-----NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDED 484 (540)
T ss_dssp EEEEECCCSEEHHHHSTT-----CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCTTCEECCCHHH
T ss_pred EEEEECCCCCCHHHHHHH-----HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECccCEECCCccc
Confidence 899999999999876443 678999999999999986 8999999999999998 999999999997654321
Q ss_pred Ccc---cccccccccccccchh
Q 041479 679 SNQ---CSSVGLKGTVGYATPE 697 (771)
Q Consensus 679 ~~~---~~~~~~~gt~~y~aPE 697 (771)
... ......+||+.|||||
T Consensus 485 ~~~~~~~~~~~~~GT~~y~APE 506 (540)
T 3en9_A 485 KAVDLIVFKKAVLSTHHEKFDE 506 (540)
T ss_dssp HHHHHHHHHHHHHHHCGGGHHH
T ss_pred cccchhhhhhhhcCCCCcCCHH
Confidence 100 0123467999999999
No 351
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.86 E-value=9.3e-23 Score=240.07 Aligned_cols=231 Identities=19% Similarity=0.195 Sum_probs=127.8
Q ss_pred CccHHHHHHHHhcCCCCCCCCCCCCCCC-CCCccceeeeecCCCCcEEEEEcCCCCCcccCCccccCCCCCcEEEcCCCc
Q 041479 1 EPDKQALLAFKSKVDDDPFGALSTWNDS-VNFCQWLGVTCSLKYQRVILLNLSGQNLTGTASPYIGNLTFLRLINLQQNN 79 (771)
Q Consensus 1 ~~~~~~l~~~~~~~~~~~~~~~~~w~~~-~~~c~w~~v~c~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~ 79 (771)
+.++++|+++..++..+.+.....|... +.++.|.++.++. .+++.|+|++|.+... +. ..|+.++|++|.
T Consensus 131 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~--~~~~~l~L~~n~~~~~-~~-----~~l~~l~Ls~~~ 202 (727)
T 4b8c_D 131 DCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTATNSAVST--PLTPKIELFANGKDEA-NQ-----ALLQHKKLSQYS 202 (727)
T ss_dssp -CCCHHHHHHHHHHHHHHTTC-----------------------------------------------------------
T ss_pred ccchhhhhhhhhhcccccCcccCCCcCCCCccccCCCceecC--CccceEEeeCCCCCcc-hh-----hHhhcCccCccc
Confidence 3578999999987655555555678543 4567899998876 6899999999998853 22 336677777777
Q ss_pred ccccCCccccCCCCCCEEecccCcCcccCCcccccCCcccccCCccccCCCCCCEEecccccCcCCCCccceeeeccccc
Q 041479 80 FSSNIPHEIGRLFRLRHIIFNSNALQGQIPDSRLILNKLEGNIPSELGSLLKFKGLGLANNYFTGPIPHLNMFQVSVYSL 159 (771)
Q Consensus 80 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~L~~l~l~~n~l 159 (771)
|.+ ++++.|.+. ..|..|..+.+|+.|+|++|.|.
T Consensus 203 i~~--------------~~~~~n~~~---------------~~~~~~~~l~~L~~L~Ls~n~l~---------------- 237 (727)
T 4b8c_D 203 IDE--------------DDDIENRMV---------------MPKDSKYDDQLWHALDLSNLQIF---------------- 237 (727)
T ss_dssp ------------------------------------------------CCCCCCEEECTTSCCS----------------
T ss_pred ccC--------------cccccccee---------------cChhhhccCCCCcEEECCCCCCC----------------
Confidence 764 244455543 45666777777888888877776
Q ss_pred ccccCccccCCCCCCEEecccCcCcccCChhhhhCCCCCcEEEeecCcccccCCccccCCCCCCEEEccccccCCCCCcC
Q 041479 160 TGSIPIQLLNITSMEYFHVSENQLVGELPPHIGFTLPNVRILLLAGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPED 239 (771)
Q Consensus 160 ~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 239 (771)
.+|..+.++++|++|+|++|.|+ .+|..+. .+++|++|+|++|+|+ .+|..|.++++|++|+|++|.|+. +|..
T Consensus 238 --~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~-~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~-lp~~ 311 (727)
T 4b8c_D 238 --NISANIFKYDFLTRLYLNGNSLT-ELPAEIK-NLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVTT-LPWE 311 (727)
T ss_dssp --CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGG-GGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCCC-CCSS
T ss_pred --CCChhhcCCCCCCEEEeeCCcCc-ccChhhh-CCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCCc-cChh
Confidence 45666667888888888888888 8888776 8889999999999998 678889999999999999999974 4655
Q ss_pred cccccCCCCCcEEEccCccccccCChhhhhcccccceeecccCcCcccCccccc
Q 041479 240 LDSLVNCTYLEVVSLSVNSLSGTLPNSLANFSSHLRYLYMSANPISGSIPTEIG 293 (771)
Q Consensus 240 ~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~ 293 (771)
| .++++|++|+|++|.|++.+|..+......+..|+|++|.+++.+|..+.
T Consensus 312 ~---~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~l~ 362 (727)
T 4b8c_D 312 F---GNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHERR 362 (727)
T ss_dssp T---TSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC--
T ss_pred h---hcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccccc
Confidence 5 77889999999999999888888766543345688999999988876543
No 352
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.84 E-value=9.4e-21 Score=188.23 Aligned_cols=180 Identities=18% Similarity=0.117 Sum_probs=128.9
Q ss_pred CEEecccCcCcccCChhhhhCCCCCcEEEeecCcccccCCccccCCCCCCEEEccccccCCCCCcCcccccCCCCCcEEE
Q 041479 174 EYFHVSENQLVGELPPHIGFTLPNVRILLLAGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEVVS 253 (771)
Q Consensus 174 ~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~ 253 (771)
+.++.+++.++ .+|..+. ++|++|++++|+|++..+..|..+++|++|++++|+++++.+..| ..+++|++|+
T Consensus 10 ~~v~c~~~~l~-~~p~~~~---~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~---~~l~~L~~L~ 82 (208)
T 2o6s_A 10 TTVECYSQGRT-SVPTGIP---AQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVF---NKLTSLTYLN 82 (208)
T ss_dssp TEEECCSSCCS-SCCSCCC---TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTT---TTCTTCCEEE
T ss_pred CEEEecCCCcc-CCCCCCC---CCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhc---CCCCCcCEEE
Confidence 46677777777 6776543 578888888888887777777888888888888888887666555 6677888888
Q ss_pred ccCccccccCChhhhhcccccceeecccCcCcccCcccccccCCcceEecCCccceeccCccccCCCCCCEEEccCCccc
Q 041479 254 LSVNSLSGTLPNSLANFSSHLRYLYMSANPISGSIPTEIGNLKNLIIIAIEKFILIRNIPISVGYLLKLQVLSLFENNIS 333 (771)
Q Consensus 254 Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 333 (771)
+++|++++..+..+..+. +|++|++++|+|++..+..|..+++|+.|++++|.+.+..+..+..+++|+.|++++|.+.
T Consensus 83 Ls~n~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 161 (208)
T 2o6s_A 83 LSTNQLQSLPNGVFDKLT-QLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWD 161 (208)
T ss_dssp CCSSCCCCCCTTTTTTCT-TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBC
T ss_pred CCCCcCCccCHhHhcCcc-CCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCee
Confidence 888888744444455554 6888888888887666666777777777777777776655555677777777777777665
Q ss_pred ccCCcccccccccccccccCccceecCCccccccc
Q 041479 334 REIPSSLGNFTFLTELNLCGNSIRGSVPSALGSCH 368 (771)
Q Consensus 334 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 368 (771)
+ .+++|++|+++.|+++|.+|..++.+.
T Consensus 162 ~-------~~~~l~~L~~~~n~~~g~ip~~~~~l~ 189 (208)
T 2o6s_A 162 C-------TCPGIRYLSEWINKHSGVVRNSAGSVA 189 (208)
T ss_dssp C-------CTTTTHHHHHHHHHCTTTBBCTTSSBC
T ss_pred c-------CCCCHHHHHHHHHhCCceeeccCcccc
Confidence 3 345677777777777777776666543
No 353
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.84 E-value=2.9e-20 Score=187.60 Aligned_cols=165 Identities=21% Similarity=0.199 Sum_probs=113.4
Q ss_pred CCCCCCCCCCccceeeeecCCCCcEEEEEcCCCCCcccCCccccCCCCCcEEEcCCCcccccCCccccCCCCCCEEeccc
Q 041479 22 LSTWNDSVNFCQWLGVTCSLKYQRVILLNLSGQNLTGTASPYIGNLTFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNS 101 (771)
Q Consensus 22 ~~~w~~~~~~c~w~~v~c~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 101 (771)
..-|..++..|+|.+|.|.. ++++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 9 ~~~~~~~~~~Cs~~~v~c~~------------~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~ 73 (229)
T 3e6j_A 9 HSAACPSQCSCSGTTVDCRS------------KRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGS 73 (229)
T ss_dssp --CCCCTTCEEETTEEECTT------------SCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred hhccCCCCCEEeCCEeEccC------------CCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCC
Confidence 45566678899999999975 4455 4454443 8899999999999998888999999999999999
Q ss_pred CcCcccCCcccccCCcccccCCccccCCCCCCEEecccccCcCCCCccceeeecccccccccCccccCCCCCCEEecccC
Q 041479 102 NALQGQIPDSRLILNKLEGNIPSELGSLLKFKGLGLANNYFTGPIPHLNMFQVSVYSLTGSIPIQLLNITSMEYFHVSEN 181 (771)
Q Consensus 102 N~l~~~~p~~~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N 181 (771)
|+|+ ...+..|..+++|+.|+|++|+|++ ..+..|..+++|++|+|++|
T Consensus 74 N~l~--------------~i~~~~~~~l~~L~~L~Ls~N~l~~-----------------l~~~~~~~l~~L~~L~Ls~N 122 (229)
T 3e6j_A 74 NQLG--------------ALPVGVFDSLTQLTVLDLGTNQLTV-----------------LPSAVFDRLVHLKELFMCCN 122 (229)
T ss_dssp SCCC--------------CCCTTTTTTCTTCCEEECCSSCCCC-----------------CCTTTTTTCTTCCEEECCSS
T ss_pred CCCC--------------CcChhhcccCCCcCEEECCCCcCCc-----------------cChhHhCcchhhCeEeccCC
Confidence 9965 2233446677777777777776652 22334556666666666666
Q ss_pred cCcccCChhhhhCCCCCcEEEeecCcccccCCccccCCCCCCEEEccccccCC
Q 041479 182 QLVGELPPHIGFTLPNVRILLLAGNQFFGNIPHSISNASKLEWLDFANNSLTG 234 (771)
Q Consensus 182 ~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 234 (771)
+|+ .+|..+. .+++|++|+|++|+|++..+..|..+++|+.|+|++|.+..
T Consensus 123 ~l~-~lp~~~~-~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 173 (229)
T 3e6j_A 123 KLT-ELPRGIE-RLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDC 173 (229)
T ss_dssp CCC-SCCTTGG-GCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCT
T ss_pred ccc-ccCcccc-cCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccC
Confidence 666 6666554 56666666666666665555556666666666666666553
No 354
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.84 E-value=1.6e-20 Score=213.22 Aligned_cols=196 Identities=26% Similarity=0.303 Sum_probs=102.8
Q ss_pred CCcEEEcCCCcccccCCccccCCCCCCEEecccCcCcccCCcccccCCcccccCCccccCCCCCCEEecccccCcCCCCc
Q 041479 69 FLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNALQGQIPDSRLILNKLEGNIPSELGSLLKFKGLGLANNYFTGPIPH 148 (771)
Q Consensus 69 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~ 148 (771)
+|+.|+|++|+|++ +|..+. ++|++|+|++|+|+ .+| ..+++|+.|+|++|+|++
T Consensus 60 ~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~---------------~ip---~~l~~L~~L~Ls~N~l~~---- 114 (571)
T 3cvr_A 60 QFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI---------------SLP---ELPASLEYLDACDNRLST---- 114 (571)
T ss_dssp TCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS---------------CCC---CCCTTCCEEECCSSCCSC----
T ss_pred CccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc---------------ccc---cccCCCCEEEccCCCCCC----
Confidence 66777777777765 555442 56666666666654 233 234555666666555552
Q ss_pred cceeeecccccccccCccccCCCCCCEEecccCcCcccCChhhhhCCCCCcEEEeecCcccccCCccccCCCCCCEEEcc
Q 041479 149 LNMFQVSVYSLTGSIPIQLLNITSMEYFHVSENQLVGELPPHIGFTLPNVRILLLAGNQFFGNIPHSISNASKLEWLDFA 228 (771)
Q Consensus 149 L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls 228 (771)
+|. +.+ +|++|+|++|+|+ .+|. .+++|+.|+|++|+|++ +|. .+++|+.|+|+
T Consensus 115 --------------ip~-l~~--~L~~L~Ls~N~l~-~lp~----~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls 168 (571)
T 3cvr_A 115 --------------LPE-LPA--SLKHLDVDNNQLT-MLPE----LPALLEYINADNNQLTM-LPE---LPTSLEVLSVR 168 (571)
T ss_dssp --------------CCC-CCT--TCCEEECCSSCCS-CCCC----CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECC
T ss_pred --------------cch-hhc--CCCEEECCCCcCC-CCCC----cCccccEEeCCCCccCc-CCC---cCCCcCEEECC
Confidence 232 222 5666666666665 3554 34556666666666554 333 34555555565
Q ss_pred ccccCCCCCcCcccccCCCCCcEEEccCccccccCChhhhhcccccceeecccCcCcccCcccccccCCcceEecCCccc
Q 041479 229 NNSLTGLIPEDLDSLVNCTYLEVVSLSVNSLSGTLPNSLANFSSHLRYLYMSANPISGSIPTEIGNLKNLIIIAIEKFIL 308 (771)
Q Consensus 229 ~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l 308 (771)
+|+|++ +|. | . ++|+.|+|++|+|+ .+|. +.. +| +.....|+.|++++|.+
T Consensus 169 ~N~L~~-lp~-l---~--~~L~~L~Ls~N~L~-~lp~-~~~---~L-----------------~~~~~~L~~L~Ls~N~l 219 (571)
T 3cvr_A 169 NNQLTF-LPE-L---P--ESLEALDVSTNLLE-SLPA-VPV---RN-----------------HHSEETEIFFRCRENRI 219 (571)
T ss_dssp SSCCSC-CCC-C---C--TTCCEEECCSSCCS-SCCC-CC----------------------------CCEEEECCSSCC
T ss_pred CCCCCC-cch-h---h--CCCCEEECcCCCCC-chhh-HHH---hh-----------------hcccccceEEecCCCcc
Confidence 555554 232 3 2 45555555555555 4444 221 23 00000114555555544
Q ss_pred eeccCccccCCCCCCEEEccCCcccccCCcccccccc
Q 041479 309 IRNIPISVGYLLKLQVLSLFENNISREIPSSLGNFTF 345 (771)
Q Consensus 309 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 345 (771)
. .+|..+..+++|+.|+|++|.+++.+|..+..++.
T Consensus 220 ~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l~~ 255 (571)
T 3cvr_A 220 T-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQTA 255 (571)
T ss_dssp C-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHHHH
T ss_pred e-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHhhc
Confidence 3 34555555666777777777777666666665543
No 355
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.82 E-value=1.1e-20 Score=196.71 Aligned_cols=127 Identities=18% Similarity=0.117 Sum_probs=103.7
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeeccch------------------hhHHHHHHHHHHHhccCCCCceeEEEEee
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLHQR------------------GALKSFMAECQALRNIRHRNLVKIITACS 588 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~------------------~~~~~~~~E~~~l~~l~H~nIv~l~~~~~ 588 (771)
..+|+|.+|.||+|++ .+++.||||+++.... .....+.+|++++++++|+++.. ++.
T Consensus 96 ~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~~~~v~~---~~~ 171 (282)
T 1zar_A 96 KLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPK---VYA 171 (282)
T ss_dssp EEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCC---EEE
T ss_pred CEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhccCCCcCe---EEe
Confidence 5689999999999999 6778999999964321 23567999999999999544444 432
Q ss_pred cCCCCCceeEEEEEEeccCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEeccc
Q 041479 589 TSDFQGNYFRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFG 668 (771)
Q Consensus 589 ~~~~~~~~~~~lv~e~~~~g~L~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfG 668 (771)
.. ..|+||||+++|+|.++ ...+...++.|++.||+|||+. +|+||||||+|||++ ++.+||+|||
T Consensus 172 ~~------~~~lvmE~~~g~~L~~l----~~~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~NILl~-~~~vkl~DFG 237 (282)
T 1zar_A 172 WE------GNAVLMELIDAKELYRV----RVENPDEVLDMILEEVAKFYHR---GIVHGDLSQYNVLVS-EEGIWIIDFP 237 (282)
T ss_dssp EE------TTEEEEECCCCEEGGGC----CCSCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEE-TTEEEECCCT
T ss_pred cc------ceEEEEEecCCCcHHHc----chhhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHHEEEE-CCcEEEEECC
Confidence 22 35899999999999873 2234567999999999999986 999999999999999 9999999999
Q ss_pred Ccc
Q 041479 669 LTR 671 (771)
Q Consensus 669 la~ 671 (771)
+|+
T Consensus 238 ~a~ 240 (282)
T 1zar_A 238 QSV 240 (282)
T ss_dssp TCE
T ss_pred CCe
Confidence 986
No 356
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.82 E-value=3.3e-20 Score=200.80 Aligned_cols=179 Identities=24% Similarity=0.155 Sum_probs=117.2
Q ss_pred cEEEccCccccccCChhhhhcccccceeecccCcCcccCccccc-ccCCcceEecCCccceeccCccccCCCCCCEEEcc
Q 041479 250 EVVSLSVNSLSGTLPNSLANFSSHLRYLYMSANPISGSIPTEIG-NLKNLIIIAIEKFILIRNIPISVGYLLKLQVLSLF 328 (771)
Q Consensus 250 ~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls 328 (771)
+.+++++|.++ .+|..+. ..++.|+|++|+|++..+..|. ++++|+.|++++|.+.+..+..|..+++|++|+|+
T Consensus 21 ~~l~c~~~~l~-~iP~~~~---~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 96 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP---SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLS 96 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC---TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CEEEeCCCCcC-ccCccCC---CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECC
Confidence 34555555555 4554332 2455666666666655555555 66666666666666665555666666667777777
Q ss_pred CCcccccCCcccccccccccccccCccceecCCcccccccce-eeecccCcccCCCCcCC---CCCCCCCeEECCCCccc
Q 041479 329 ENNISREIPSSLGNFTFLTELNLCGNSIRGSVPSALGSCHQL-WLDLSHNHLTGPIPLAV---GNPKSIPHLDLSKNELS 404 (771)
Q Consensus 329 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l-~L~Ls~N~l~~~~p~~~---~~l~~L~~L~Ls~N~l~ 404 (771)
+|+|+...+..|..+++|++|+|++|+|++..|..|..++.| .|+|++|+|++..+..| ..+++|+.|+|++|+|+
T Consensus 97 ~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~ 176 (361)
T 2xot_A 97 SNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLK 176 (361)
T ss_dssp SSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCC
T ss_pred CCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCC
Confidence 777766556666777777777777777776666677777776 67777777775555555 56888999999999998
Q ss_pred ccCCcchhhhhccccc--ccEEECcCCCCCCCCC
Q 041479 405 GEIPSSLAWIFGYISI--FAKLNLSYNNLDGDVP 436 (771)
Q Consensus 405 ~~~p~~l~~~~~~l~~--L~~L~Ls~N~l~~~~p 436 (771)
+..+..+. .++. ++.|+|++|+|.|.+.
T Consensus 177 ~l~~~~~~----~l~~~~l~~l~l~~N~~~C~C~ 206 (361)
T 2xot_A 177 KLPLTDLQ----KLPAWVKNGLYLHNNPLECDCK 206 (361)
T ss_dssp CCCHHHHH----HSCHHHHTTEECCSSCEECCHH
T ss_pred ccCHHHhh----hccHhhcceEEecCCCccCCcC
Confidence 54444443 5555 4789999999988765
No 357
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.81 E-value=4.6e-20 Score=184.84 Aligned_cols=157 Identities=17% Similarity=0.101 Sum_probs=91.9
Q ss_pred cEEEccCccccccCChhhhhcccccceeecccCcCcccCc-ccccccCCcceEecCCccceeccCccccCCCCCCEEEcc
Q 041479 250 EVVSLSVNSLSGTLPNSLANFSSHLRYLYMSANPISGSIP-TEIGNLKNLIIIAIEKFILIRNIPISVGYLLKLQVLSLF 328 (771)
Q Consensus 250 ~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls 328 (771)
+.+++++|.++ .+|..+. ..+++|+|++|+|++..| ..|..+++|+.|++++|.+.+..+..|..+++|++|+|+
T Consensus 14 ~~l~~s~n~l~-~iP~~~~---~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 89 (220)
T 2v70_A 14 TTVDCSNQKLN-KIPEHIP---QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLT 89 (220)
T ss_dssp TEEECCSSCCS-SCCSCCC---TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CEeEeCCCCcc-cCccCCC---CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECC
Confidence 57788888877 5676553 246777888887776543 335556655555555555555444455555555555555
Q ss_pred CCcccccCCcccccccccccccccCccceecCCcccccccceeeecccCcccCCCCcCCCCCCCCCeEECCCCcccccCC
Q 041479 329 ENNISREIPSSLGNFTFLTELNLCGNSIRGSVPSALGSCHQLWLDLSHNHLTGPIPLAVGNPKSIPHLDLSKNELSGEIP 408 (771)
Q Consensus 329 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 408 (771)
+|++++..|..|..+++|++|+|++|+| ++..|..|..+++|++|+|++|+|++..|
T Consensus 90 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l-----------------------~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 146 (220)
T 2v70_A 90 SNRLENVQHKMFKGLESLKTLMLRSNRI-----------------------TCVGNDSFIGLSSVRLLSLYDNQITTVAP 146 (220)
T ss_dssp SSCCCCCCGGGGTTCSSCCEEECTTSCC-----------------------CCBCTTSSTTCTTCSEEECTTSCCCCBCT
T ss_pred CCccCccCHhHhcCCcCCCEEECCCCcC-----------------------CeECHhHcCCCccCCEEECCCCcCCEECH
Confidence 5555544444455555555555555544 44555555566666666666666665555
Q ss_pred cchhhhhcccccccEEECcCCCCCCCCCc
Q 041479 409 SSLAWIFGYISIFAKLNLSYNNLDGDVPR 437 (771)
Q Consensus 409 ~~l~~~~~~l~~L~~L~Ls~N~l~~~~p~ 437 (771)
..+. .+++|+.|+|++|+|+|.++-
T Consensus 147 ~~~~----~l~~L~~L~L~~N~l~c~c~l 171 (220)
T 2v70_A 147 GAFD----TLHSLSTLNLLANPFNCNCYL 171 (220)
T ss_dssp TTTT----TCTTCCEEECCSCCEECSGGG
T ss_pred HHhc----CCCCCCEEEecCcCCcCCCch
Confidence 5443 556666666666666665553
No 358
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.81 E-value=4.6e-20 Score=199.66 Aligned_cols=176 Identities=19% Similarity=0.176 Sum_probs=142.5
Q ss_pred CEEecccCcCcccCChhhhhCCCCCcEEEeecCcccccCCcccc-CCCCCCEEEccccccCCCCCcCcccccCCCCCcEE
Q 041479 174 EYFHVSENQLVGELPPHIGFTLPNVRILLLAGNQFFGNIPHSIS-NASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEVV 252 (771)
Q Consensus 174 ~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L 252 (771)
+.+++++|+++ .+|..+. +.++.|+|++|+|++..+..|. ++++|+.|+|++|+|+++.+..| .++++|++|
T Consensus 21 ~~l~c~~~~l~-~iP~~~~---~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~---~~l~~L~~L 93 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP---SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAF---VPVPNLRYL 93 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC---TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTT---TTCTTCCEE
T ss_pred CEEEeCCCCcC-ccCccCC---CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhc---cCCCCCCEE
Confidence 67899999998 7887654 5688999999999988888887 89999999999999998877666 778889999
Q ss_pred EccCccccccCChhhhhcccccceeecccCcCcccCcccccccCCcceEecCCccceeccCccc---cCCCCCCEEEccC
Q 041479 253 SLSVNSLSGTLPNSLANFSSHLRYLYMSANPISGSIPTEIGNLKNLIIIAIEKFILIRNIPISV---GYLLKLQVLSLFE 329 (771)
Q Consensus 253 ~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~---~~l~~L~~L~Ls~ 329 (771)
+|++|+|++..+..|..+. +|++|+|++|+|++..|..|.++++|+.|+|++|.+.+..+..| ..+++|+.|+|++
T Consensus 94 ~Ls~N~l~~~~~~~~~~l~-~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~ 172 (361)
T 2xot_A 94 DLSSNHLHTLDEFLFSDLQ-ALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSS 172 (361)
T ss_dssp ECCSSCCCEECTTTTTTCT-TCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCS
T ss_pred ECCCCcCCcCCHHHhCCCc-CCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCC
Confidence 9999999855555666665 79999999999988888888888888888888888876544444 5688888999999
Q ss_pred CcccccCCcccccccc--cccccccCccce
Q 041479 330 NNISREIPSSLGNFTF--LTELNLCGNSIR 357 (771)
Q Consensus 330 N~l~~~~p~~~~~l~~--L~~L~Ls~N~l~ 357 (771)
|+|+...+..|..++. |+.|+|++|.+.
T Consensus 173 N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 173 NKLKKLPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp SCCCCCCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred CCCCccCHHHhhhccHhhcceEEecCCCcc
Confidence 9888655567777776 478888888886
No 359
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.81 E-value=9.7e-23 Score=232.66 Aligned_cols=203 Identities=16% Similarity=0.105 Sum_probs=154.0
Q ss_pred cCCCCCcEEEcCCCcccccCCccccCCCCCCEEecccCcCcccCCcccccCCcccccCCccccCCCCCCEEe-cccccCc
Q 041479 65 GNLTFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNALQGQIPDSRLILNKLEGNIPSELGSLLKFKGLG-LANNYFT 143 (771)
Q Consensus 65 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~l~~n~l~~~~p~~~~~l~~L~~L~-Ls~N~l~ 143 (771)
..+++|+.|+|++|+|+ .+|.+++++++|+.|++++|.....+|.. +..+++.+..|..++++++|+.|+ ++.|++.
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~l-l~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~ 423 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILL-MRALDPLLYEKETLQYFSTLKAVDPMRAAYLD 423 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHH-HHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH
T ss_pred ccCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHH-HHhcccccCCHHHHHHHHhcccCcchhhcccc
Confidence 67899999999999998 58999999999999999877632222221 122335567888899999999999 7888765
Q ss_pred CCCCccceeeecccccccccCccccCCCCCCEEecccCcCcccCChhhhhCCCCCcEEEeecCcccccCCccccCCCCCC
Q 041479 144 GPIPHLNMFQVSVYSLTGSIPIQLLNITSMEYFHVSENQLVGELPPHIGFTLPNVRILLLAGNQFFGNIPHSISNASKLE 223 (771)
Q Consensus 144 ~~lp~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 223 (771)
+|..+.++.|.+++..+ ..|+.|+|++|+|+ .+|. +. .+++|+.|+|++|+|+ .+|..|+++++|+
T Consensus 424 ----~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~-~lp~-~~-~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~ 489 (567)
T 1dce_A 424 ----DLRSKFLLENSVLKMEY------ADVRVLHLAHKDLT-VLCH-LE-QLLLVTHLDLSHNRLR-ALPPALAALRCLE 489 (567)
T ss_dssp ----HHHHHHHHHHHHHHHHH------TTCSEEECTTSCCS-SCCC-GG-GGTTCCEEECCSSCCC-CCCGGGGGCTTCC
T ss_pred ----hhhhhhhhcccccccCc------cCceEEEecCCCCC-CCcC-cc-ccccCcEeecCccccc-ccchhhhcCCCCC
Confidence 45566667777665332 24788888888888 5776 44 7888888888888888 6778888888888
Q ss_pred EEEccccccCCCCCcCcccccCCCCCcEEEccCccccccC-ChhhhhcccccceeecccCcCcccCc
Q 041479 224 WLDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSLSGTL-PNSLANFSSHLRYLYMSANPISGSIP 289 (771)
Q Consensus 224 ~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~~L~~L~Ls~N~l~~~~p 289 (771)
.|+|++|+|+++ | .+ .++++|+.|+|++|+|++.. |..+..++ +|+.|+|++|+|++.+|
T Consensus 490 ~L~Ls~N~l~~l-p-~l---~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~-~L~~L~L~~N~l~~~~~ 550 (567)
T 1dce_A 490 VLQASDNALENV-D-GV---ANLPRLQELLLCNNRLQQSAAIQPLVSCP-RLVLLNLQGNSLCQEEG 550 (567)
T ss_dssp EEECCSSCCCCC-G-GG---TTCSSCCEEECCSSCCCSSSTTGGGGGCT-TCCEEECTTSGGGGSSS
T ss_pred EEECCCCCCCCC-c-cc---CCCCCCcEEECCCCCCCCCCCcHHHhcCC-CCCEEEecCCcCCCCcc
Confidence 888888888863 4 34 77788888888888888655 77777775 68888888888875544
No 360
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.81 E-value=7.7e-20 Score=183.20 Aligned_cols=151 Identities=22% Similarity=0.228 Sum_probs=97.5
Q ss_pred cEEEccCccccccCChhhhhcccccceeecccCcCcccCcccccccCCcceEecCCccceeccCccccCCCCCCEEEccC
Q 041479 250 EVVSLSVNSLSGTLPNSLANFSSHLRYLYMSANPISGSIPTEIGNLKNLIIIAIEKFILIRNIPISVGYLLKLQVLSLFE 329 (771)
Q Consensus 250 ~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~ 329 (771)
+.+++++|.++ .+|..+. ++|+.|++++|+|++..+..|.++++|+.|++++|.+.+..|..|..+++|++|+|++
T Consensus 14 ~~v~c~~~~l~-~iP~~l~---~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~ 89 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP---ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYG 89 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC---TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCS
T ss_pred CEEEcCCCCcC-cCCCccC---cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCC
Confidence 56788888887 6776554 3688888888888876666777777777777777777666666677777777777777
Q ss_pred CcccccCCcccccccccccccccCccceecCCcccccccce-eeecccCcccCCCCcCCCCCCCCCeEECCCCccc
Q 041479 330 NNISREIPSSLGNFTFLTELNLCGNSIRGSVPSALGSCHQL-WLDLSHNHLTGPIPLAVGNPKSIPHLDLSKNELS 404 (771)
Q Consensus 330 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 404 (771)
|+|+...+..|..+++|++|+|++|+|++..|..|..++.| .|+|++|+|++..+..|..+++|+.|+|++|++.
T Consensus 90 N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 90 NKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFI 165 (220)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcC
Confidence 77765545556666666666666666665555555555555 4555555555444444555555555555555544
No 361
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.81 E-value=1.2e-19 Score=190.02 Aligned_cols=185 Identities=23% Similarity=0.335 Sum_probs=108.5
Q ss_pred EcCCCCCcccCCccccCCCCCcEEEcCCCcccccCCccccCCCCCCEEecccCcCcccCCcccccCCcccccCCccccCC
Q 041479 50 NLSGQNLTGTASPYIGNLTFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNALQGQIPDSRLILNKLEGNIPSELGSL 129 (771)
Q Consensus 50 ~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~l~~n~l~~~~p~~~~~l 129 (771)
.+..+.+++.. .+..+++|+.|++++|.+++ +| .+..+++|++|+|++|+++ .++. +.++
T Consensus 30 ~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~-~~-~~~~l~~L~~L~L~~n~l~---------------~~~~-l~~l 89 (291)
T 1h6t_A 30 NLKKKSVTDAV--TQNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLT---------------DIKP-LANL 89 (291)
T ss_dssp HTTCSCTTSEE--CHHHHHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCC---------------CCGG-GTTC
T ss_pred HhcCCCccccc--chhhcCcccEEEccCCCccc-Ch-hHhcCCCCCEEEccCCccC---------------CCcc-cccC
Confidence 34444544332 23456666666666666664 33 3666666666666666654 1222 5666
Q ss_pred CCCCEEecccccCcCCCCccceeeecccccccccCccccCCCCCCEEecccCcCcccCChhhhhCCCCCcEEEeecCccc
Q 041479 130 LKFKGLGLANNYFTGPIPHLNMFQVSVYSLTGSIPIQLLNITSMEYFHVSENQLVGELPPHIGFTLPNVRILLLAGNQFF 209 (771)
Q Consensus 130 ~~L~~L~Ls~N~l~~~lp~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~ 209 (771)
++|+.|++++|++++ +| .+..+++|++|++++|+++ .++ .+. .+++|+.|++++|+|+
T Consensus 90 ~~L~~L~l~~n~l~~------------------~~-~l~~l~~L~~L~L~~n~i~-~~~-~l~-~l~~L~~L~l~~n~l~ 147 (291)
T 1h6t_A 90 KNLGWLFLDENKVKD------------------LS-SLKDLKKLKSLSLEHNGIS-DIN-GLV-HLPQLESLYLGNNKIT 147 (291)
T ss_dssp TTCCEEECCSSCCCC------------------GG-GGTTCTTCCEEECTTSCCC-CCG-GGG-GCTTCCEEECCSSCCC
T ss_pred CCCCEEECCCCcCCC------------------Ch-hhccCCCCCEEECCCCcCC-CCh-hhc-CCCCCCEEEccCCcCC
Confidence 666666666666652 11 2556666666666666666 343 233 5666666666666666
Q ss_pred ccCCccccCCCCCCEEEccccccCCCCCcCcccccCCCCCcEEEccCccccccCChhhhhcccccceeecccCcCcc
Q 041479 210 GNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSLSGTLPNSLANFSSHLRYLYMSANPISG 286 (771)
Q Consensus 210 ~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~ 286 (771)
+. ..+..+++|+.|++++|+|++..| + ..+++|+.|++++|.++ .+|. +..+. +|+.|++++|+++.
T Consensus 148 ~~--~~l~~l~~L~~L~L~~N~l~~~~~--l---~~l~~L~~L~L~~N~i~-~l~~-l~~l~-~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 148 DI--TVLSRLTKLDTLSLEDNQISDIVP--L---AGLTKLQNLYLSKNHIS-DLRA-LAGLK-NLDVLELFSQECLN 214 (291)
T ss_dssp CC--GGGGGCTTCSEEECCSSCCCCCGG--G---TTCTTCCEEECCSSCCC-BCGG-GTTCT-TCSEEEEEEEEEEC
T ss_pred cc--hhhccCCCCCEEEccCCccccchh--h---cCCCccCEEECCCCcCC-CChh-hccCC-CCCEEECcCCcccC
Confidence 43 456666666777777666665433 2 55666666666666666 3432 44443 56666666666653
No 362
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.81 E-value=1.3e-19 Score=208.15 Aligned_cols=190 Identities=23% Similarity=0.326 Sum_probs=117.6
Q ss_pred EEEEEcCCCCCcccCCccccCCCCCcEEEcCCCcccccCCccccCCCCCCEEecccCcCcccCCcccccCCcccccCCcc
Q 041479 46 VILLNLSGQNLTGTASPYIGNLTFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNALQGQIPDSRLILNKLEGNIPSE 125 (771)
Q Consensus 46 l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~l~~n~l~~~~p~~ 125 (771)
+..+.|+.+.+....+ +..|++|+.|+|++|.|+. +| .|..+++|+.|+|++|+|++ ++.
T Consensus 23 l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~---------------~~~- 82 (605)
T 1m9s_A 23 TIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTD---------------IKP- 82 (605)
T ss_dssp HHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCC---------------CGG-
T ss_pred HHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCC---------------Chh-
Confidence 3344555555554332 4566777777777777764 33 46777777777777777542 222
Q ss_pred ccCCCCCCEEecccccCcCCCCccceeeecccccccccCccccCCCCCCEEecccCcCcccCChhhhhCCCCCcEEEeec
Q 041479 126 LGSLLKFKGLGLANNYFTGPIPHLNMFQVSVYSLTGSIPIQLLNITSMEYFHVSENQLVGELPPHIGFTLPNVRILLLAG 205 (771)
Q Consensus 126 ~~~l~~L~~L~Ls~N~l~~~lp~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~ 205 (771)
+..+++|+.|+|++|+|++ +| .+..+++|+.|+|++|+++ .+|. +. .+++|+.|+|++
T Consensus 83 l~~l~~L~~L~Ls~N~l~~------------------l~-~l~~l~~L~~L~Ls~N~l~-~l~~-l~-~l~~L~~L~Ls~ 140 (605)
T 1m9s_A 83 LTNLKNLGWLFLDENKIKD------------------LS-SLKDLKKLKSLSLEHNGIS-DING-LV-HLPQLESLYLGN 140 (605)
T ss_dssp GGGCTTCCEEECCSSCCCC------------------CT-TSTTCTTCCEEECTTSCCC-CCGG-GG-GCTTCSEEECCS
T ss_pred hccCCCCCEEECcCCCCCC------------------Ch-hhccCCCCCEEEecCCCCC-CCcc-cc-CCCccCEEECCC
Confidence 5666677777777776652 12 4566667777777777776 3432 33 667777777777
Q ss_pred CcccccCCccccCCCCCCEEEccccccCCCCCcCcccccCCCCCcEEEccCccccccCChhhhhcccccceeecccCcCc
Q 041479 206 NQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSLSGTLPNSLANFSSHLRYLYMSANPIS 285 (771)
Q Consensus 206 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~ 285 (771)
|+|++. ..|..+++|+.|+|++|+|++..| + ..+++|+.|+|++|.|++ +| .+..+. +|+.|+|++|++.
T Consensus 141 N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l---~~l~~L~~L~Ls~N~i~~-l~-~l~~l~-~L~~L~L~~N~l~ 210 (605)
T 1m9s_A 141 NKITDI--TVLSRLTKLDTLSLEDNQISDIVP--L---AGLTKLQNLYLSKNHISD-LR-ALAGLK-NLDVLELFSQECL 210 (605)
T ss_dssp SCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--G---TTCTTCCEEECCSSCCCB-CG-GGTTCT-TCSEEECCSEEEE
T ss_pred CccCCc--hhhcccCCCCEEECcCCcCCCchh--h---ccCCCCCEEECcCCCCCC-Ch-HHccCC-CCCEEEccCCcCc
Confidence 777654 456677777777777777766544 3 566677777777777763 33 355554 5777777777766
Q ss_pred cc
Q 041479 286 GS 287 (771)
Q Consensus 286 ~~ 287 (771)
+.
T Consensus 211 ~~ 212 (605)
T 1m9s_A 211 NK 212 (605)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 363
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.79 E-value=3e-19 Score=178.86 Aligned_cols=156 Identities=21% Similarity=0.178 Sum_probs=131.6
Q ss_pred CEEEccccccCCCCCcCcccccCCCCCcEEEccCccccccCChh-hhhcccccceeecccCcCcccCcccccccCCcceE
Q 041479 223 EWLDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSLSGTLPNS-LANFSSHLRYLYMSANPISGSIPTEIGNLKNLIII 301 (771)
Q Consensus 223 ~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 301 (771)
+.+++++|.++.+ |..+ ...+++|+|++|+|++..|.. +..+. +|++|+|++|+|++..+..|.++++|+.|
T Consensus 14 ~~l~~s~n~l~~i-P~~~-----~~~~~~L~L~~N~l~~~~~~~~~~~l~-~L~~L~L~~N~i~~i~~~~~~~l~~L~~L 86 (220)
T 2v70_A 14 TTVDCSNQKLNKI-PEHI-----PQYTAELRLNNNEFTVLEATGIFKKLP-QLRKINFSNNKITDIEEGAFEGASGVNEI 86 (220)
T ss_dssp TEEECCSSCCSSC-CSCC-----CTTCSEEECCSSCCCEECCCCCGGGCT-TCCEEECCSSCCCEECTTTTTTCTTCCEE
T ss_pred CEeEeCCCCcccC-ccCC-----CCCCCEEEcCCCcCCccCchhhhccCC-CCCEEECCCCcCCEECHHHhCCCCCCCEE
Confidence 5899999999875 5443 245789999999999665544 56665 89999999999998888899999999999
Q ss_pred ecCCccceeccCccccCCCCCCEEEccCCcccccCCcccccccccccccccCccceecCCcccccccceeeecccCcccC
Q 041479 302 AIEKFILIRNIPISVGYLLKLQVLSLFENNISREIPSSLGNFTFLTELNLCGNSIRGSVPSALGSCHQLWLDLSHNHLTG 381 (771)
Q Consensus 302 ~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~L~Ls~N~l~~ 381 (771)
++++|.+.+..+..|..+++|++|+|++|+|++..|..|..+++|++|+|++|+|++.
T Consensus 87 ~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~---------------------- 144 (220)
T 2v70_A 87 LLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTV---------------------- 144 (220)
T ss_dssp ECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCB----------------------
T ss_pred ECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEE----------------------
Confidence 9999999988888899999999999999999988899999999998888888877743
Q ss_pred CCCcCCCCCCCCCeEECCCCcccccCC
Q 041479 382 PIPLAVGNPKSIPHLDLSKNELSGEIP 408 (771)
Q Consensus 382 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p 408 (771)
.|..|..+++|+.|+|++|++++..+
T Consensus 145 -~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 145 -APGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp -CTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred -CHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 45566677788888888888875443
No 364
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.79 E-value=4.9e-19 Score=177.37 Aligned_cols=159 Identities=21% Similarity=0.206 Sum_probs=136.4
Q ss_pred cceeecccCcCcccCcccccccCCcceEecCCccceeccCccccCCCCCCEEEccCCcccccCCcccccccccccccccC
Q 041479 274 LRYLYMSANPISGSIPTEIGNLKNLIIIAIEKFILIRNIPISVGYLLKLQVLSLFENNISREIPSSLGNFTFLTELNLCG 353 (771)
Q Consensus 274 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 353 (771)
-+.+++++|.++ .+|..+. ++|+.|++++|.+.+..+..|..+++|+.|+|++|+|++..|..|.++++|++|+|++
T Consensus 13 ~~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~ 89 (220)
T 2v9t_B 13 NNIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYG 89 (220)
T ss_dssp TTEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCS
T ss_pred CCEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCC
Confidence 367889999998 5666554 6899999999999888788899999999999999999988889999999999999999
Q ss_pred ccceecCCcccccccce-eeecccCcccCCCCcCCCCCCCCCeEECCCCcccccCCcchhhhhcccccccEEECcCCCCC
Q 041479 354 NSIRGSVPSALGSCHQL-WLDLSHNHLTGPIPLAVGNPKSIPHLDLSKNELSGEIPSSLAWIFGYISIFAKLNLSYNNLD 432 (771)
Q Consensus 354 N~l~~~~p~~~~~l~~l-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~l~~L~~L~Ls~N~l~ 432 (771)
|+|++..+..|..++.| .|+|++|+|++..|..|..+++|++|+|++|+|++..+..+. .+++|+.|+|++|++.
T Consensus 90 N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~----~l~~L~~L~L~~N~~~ 165 (220)
T 2v9t_B 90 NKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFS----PLRAIQTMHLAQNPFI 165 (220)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTT----TCTTCCEEECCSSCEE
T ss_pred CcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHh----CCCCCCEEEeCCCCcC
Confidence 99997777778888888 899999999988889999999999999999999976666554 7889999999999998
Q ss_pred CCCCccc
Q 041479 433 GDVPRKM 439 (771)
Q Consensus 433 ~~~p~~~ 439 (771)
+.+.-.+
T Consensus 166 c~c~l~~ 172 (220)
T 2v9t_B 166 CDCHLKW 172 (220)
T ss_dssp CSGGGHH
T ss_pred CCCccHH
Confidence 8776443
No 365
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.79 E-value=4.5e-19 Score=185.74 Aligned_cols=173 Identities=28% Similarity=0.413 Sum_probs=135.3
Q ss_pred ccCCCCCCEEecccCcCcccCChhhhhCCCCCcEEEeecCcccccCCccccCCCCCCEEEccccccCCCCCcCcccccCC
Q 041479 167 LLNITSMEYFHVSENQLVGELPPHIGFTLPNVRILLLAGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNC 246 (771)
Q Consensus 167 ~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l 246 (771)
+..+++|+.|++++|.++ .+|. +. .+++|+.|+|++|+|++..+ +..+++|++|+|++|+++++ | .+..+
T Consensus 42 ~~~l~~L~~L~l~~~~i~-~~~~-~~-~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~-~----~l~~l 111 (291)
T 1h6t_A 42 QNELNSIDQIIANNSDIK-SVQG-IQ-YLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKDL-S----SLKDL 111 (291)
T ss_dssp HHHHHTCCEEECTTSCCC-CCTT-GG-GCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCG-G----GGTTC
T ss_pred hhhcCcccEEEccCCCcc-cChh-Hh-cCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCCC-h----hhccC
Confidence 346778888888888887 6654 43 78888889998888886544 88888889999998888763 2 24778
Q ss_pred CCCcEEEccCccccccCChhhhhcccccceeecccCcCcccCcccccccCCcceEecCCccceeccCccccCCCCCCEEE
Q 041479 247 TYLEVVSLSVNSLSGTLPNSLANFSSHLRYLYMSANPISGSIPTEIGNLKNLIIIAIEKFILIRNIPISVGYLLKLQVLS 326 (771)
Q Consensus 247 ~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 326 (771)
++|++|++++|++++ + +.+..+. +|++|++++|++++. ..+..+++|+.|++++|.+.+..| +..+++|+.|+
T Consensus 112 ~~L~~L~L~~n~i~~-~-~~l~~l~-~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~ 184 (291)
T 1h6t_A 112 KKLKSLSLEHNGISD-I-NGLVHLP-QLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLY 184 (291)
T ss_dssp TTCCEEECTTSCCCC-C-GGGGGCT-TCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEE
T ss_pred CCCCEEECCCCcCCC-C-hhhcCCC-CCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEE
Confidence 888888888888884 4 3566665 788888888888854 578888888888888888866544 78888888888
Q ss_pred ccCCcccccCCcccccccccccccccCcccee
Q 041479 327 LFENNISREIPSSLGNFTFLTELNLCGNSIRG 358 (771)
Q Consensus 327 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 358 (771)
+++|+++. +| .+..+++|+.|++++|+++.
T Consensus 185 L~~N~i~~-l~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 185 LSKNHISD-LR-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp CCSSCCCB-CG-GGTTCTTCSEEEEEEEEEEC
T ss_pred CCCCcCCC-Ch-hhccCCCCCEEECcCCcccC
Confidence 88888875 34 47888888888888888874
No 366
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.78 E-value=9.1e-22 Score=224.62 Aligned_cols=219 Identities=16% Similarity=0.116 Sum_probs=127.6
Q ss_pred cCCCCCCEEecccCcCcccCChhhhhCCCCCcEEEeecCcccccCCccccCCCCCCEEEccccccCCCCCcCcccccCCC
Q 041479 168 LNITSMEYFHVSENQLVGELPPHIGFTLPNVRILLLAGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCT 247 (771)
Q Consensus 168 ~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~ 247 (771)
...++|+.|+|++|+|+ .+|+.+. .+++|+.|++++|......|.. +..+.+.+.+|+.+ .+++
T Consensus 346 ~~~~~L~~L~Ls~n~L~-~Lp~~i~-~l~~L~~L~l~~n~~l~~l~~l-----------l~~~~~~~~~~~~l---~~l~ 409 (567)
T 1dce_A 346 ATDEQLFRCELSVEKST-VLQSELE-SCKELQELEPENKWCLLTIILL-----------MRALDPLLYEKETL---QYFS 409 (567)
T ss_dssp STTTTSSSCCCCHHHHH-HHHHHHH-HHHHHHHHCTTCHHHHHHHHHH-----------HHHHCTGGGHHHHH---HHHH
T ss_pred ccCccceeccCChhhHH-hhHHHHH-HHHHHHHhccccchhhhhHHHH-----------HHhcccccCCHHHH---HHHH
Confidence 34566666666666665 6666665 5666666666554311111100 01111233334333 3344
Q ss_pred CCcEEE-ccCccccccCChhhhhcccccceeecccCcCcccCcccccccCCcceEecCCccceeccCccccCCCCCCEEE
Q 041479 248 YLEVVS-LSVNSLSGTLPNSLANFSSHLRYLYMSANPISGSIPTEIGNLKNLIIIAIEKFILIRNIPISVGYLLKLQVLS 326 (771)
Q Consensus 248 ~L~~L~-Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 326 (771)
+|+.|+ ++.|.+. +|+.+++++|.|+...+ ..|+.|++++|.+.+ +|. ++.+++|+.|+
T Consensus 410 ~L~~L~~l~~n~~~------------~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~ 469 (567)
T 1dce_A 410 TLKAVDPMRAAYLD------------DLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLD 469 (567)
T ss_dssp HHHHHCGGGHHHHH------------HHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSS-CCC-GGGGTTCCEEE
T ss_pred hcccCcchhhcccc------------hhhhhhhhcccccccCc------cCceEEEecCCCCCC-CcC-ccccccCcEee
Confidence 455444 4444332 34444455555543221 135556666665544 444 66666777777
Q ss_pred ccCCcccccCCcccccccccccccccCccceecCCcccccccce-eeecccCcccCCC-CcCCCCCCCCCeEECCCCccc
Q 041479 327 LFENNISREIPSSLGNFTFLTELNLCGNSIRGSVPSALGSCHQL-WLDLSHNHLTGPI-PLAVGNPKSIPHLDLSKNELS 404 (771)
Q Consensus 327 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l-~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~ 404 (771)
|++|+|+ .+|..|+.+++|+.|+|++|+|++ +| .++.++.| .|+|++|+|++.. |..|+.+++|+.|+|++|+|+
T Consensus 470 Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~ 546 (567)
T 1dce_A 470 LSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLC 546 (567)
T ss_dssp CCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGG
T ss_pred cCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCC
Confidence 7777776 566677777777777777777775 44 56666666 6777777777665 777888888888888888888
Q ss_pred ccCCcchhhhhcccccccEEEC
Q 041479 405 GEIPSSLAWIFGYISIFAKLNL 426 (771)
Q Consensus 405 ~~~p~~l~~~~~~l~~L~~L~L 426 (771)
+.+| ....++..+++|+.||+
T Consensus 547 ~~~~-~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 547 QEEG-IQERLAEMLPSVSSILT 567 (567)
T ss_dssp GSSS-CTTHHHHHCTTCSEEEC
T ss_pred CCcc-HHHHHHHHCcccCccCC
Confidence 5554 33334445778888764
No 367
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.78 E-value=8.8e-19 Score=201.13 Aligned_cols=180 Identities=27% Similarity=0.377 Sum_probs=131.4
Q ss_pred ccCCCCCCEEecccCcCcccCChhhhhCCCCCcEEEeecCcccccCCccccCCCCCCEEEccccccCCCCCcCcccccCC
Q 041479 167 LLNITSMEYFHVSENQLVGELPPHIGFTLPNVRILLLAGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNC 246 (771)
Q Consensus 167 ~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l 246 (771)
+..+.+|+.|++++|.+. .+|. +. .+++|+.|+|++|+|++..| +..+++|+.|+|++|.|+++ | . +..+
T Consensus 39 ~~~L~~L~~L~l~~n~i~-~l~~-l~-~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l-~-~---l~~l 108 (605)
T 1m9s_A 39 QNELNSIDQIIANNSDIK-SVQG-IQ-YLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKDL-S-S---LKDL 108 (605)
T ss_dssp HHHHTTCCCCBCTTCCCC-CCTT-GG-GCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCC-T-T---STTC
T ss_pred hhcCCCCCEEECcCCCCC-CChH-Hc-cCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCCC-h-h---hccC
Confidence 456677788888888887 5653 43 67888888888888876544 77888888888888888753 2 2 3677
Q ss_pred CCCcEEEccCccccccCChhhhhcccccceeecccCcCcccCcccccccCCcceEecCCccceeccCccccCCCCCCEEE
Q 041479 247 TYLEVVSLSVNSLSGTLPNSLANFSSHLRYLYMSANPISGSIPTEIGNLKNLIIIAIEKFILIRNIPISVGYLLKLQVLS 326 (771)
Q Consensus 247 ~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~ 326 (771)
++|+.|+|++|.|++ + +.+..+. +|+.|+|++|+|++. ..|..+++|+.|+|++|.+.+..| +..+++|+.|+
T Consensus 109 ~~L~~L~Ls~N~l~~-l-~~l~~l~-~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~ 181 (605)
T 1m9s_A 109 KKLKSLSLEHNGISD-I-NGLVHLP-QLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLY 181 (605)
T ss_dssp TTCCEEECTTSCCCC-C-GGGGGCT-TCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEE
T ss_pred CCCCEEEecCCCCCC-C-ccccCCC-ccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEE
Confidence 888888888888873 3 3466664 688888888888754 567788888888888888776655 77888888888
Q ss_pred ccCCcccccCCcccccccccccccccCccceecCCcccc
Q 041479 327 LFENNISREIPSSLGNFTFLTELNLCGNSIRGSVPSALG 365 (771)
Q Consensus 327 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 365 (771)
|++|+|++. ..+..+++|+.|+|++|++.+.....+.
T Consensus 182 Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~~p~~~~~ 218 (605)
T 1m9s_A 182 LSKNHISDL--RALAGLKNLDVLELFSQECLNKPINHQS 218 (605)
T ss_dssp CCSSCCCBC--GGGTTCTTCSEEECCSEEEECCCCCCCS
T ss_pred CcCCCCCCC--hHHccCCCCCEEEccCCcCcCCcccccc
Confidence 888888753 3577888888888888888754433333
No 368
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.77 E-value=2.5e-19 Score=191.29 Aligned_cols=225 Identities=13% Similarity=0.097 Sum_probs=147.6
Q ss_pred ccCccccCCCCCCEEecccCcCcccCChhhhhCCCCCcEEEeecCcccccCCccccCCCCCCEEEccccc----cCCCCC
Q 041479 162 SIPIQLLNITSMEYFHVSENQLVGELPPHIGFTLPNVRILLLAGNQFFGNIPHSISNASKLEWLDFANNS----LTGLIP 237 (771)
Q Consensus 162 ~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~----l~~~~p 237 (771)
..+..+.++++|+.++|++ .++ .|++..|.++++|+.|++++|.+..+.+.+|.++.++..+.+..+. ...+.+
T Consensus 92 ~~~~~~~g~~~L~~l~L~~-~i~-~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~ 169 (329)
T 3sb4_A 92 VVNGVTKGKQTLEKVILSE-KIK-NIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEH 169 (329)
T ss_dssp EETTEEEECTTCCC-CBCT-TCC-EECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTT
T ss_pred cccccccccCCCcEEECCc-ccc-chhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccc
Confidence 3333444499999999998 887 7888888889999999999999988888889988888877776632 233333
Q ss_pred cCcccccCCCCCc-EEEccCccccccCChhhhhc---ccccceeecccCcCcccCcccc-cccCCcceEecCCccceecc
Q 041479 238 EDLDSLVNCTYLE-VVSLSVNSLSGTLPNSLANF---SSHLRYLYMSANPISGSIPTEI-GNLKNLIIIAIEKFILIRNI 312 (771)
Q Consensus 238 ~~~~~l~~l~~L~-~L~Ls~N~l~~~~p~~~~~l---~~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~l~~n~l~~~~ 312 (771)
.+| .++..|+ .+++.... .++..++.. ..++..+.+.++-.. .....+ ..+++|+.+++++|.+....
T Consensus 170 ~~f---~~~~~L~~~i~~~~~~---~l~~~~~~~~~~~~~~~~l~~~~~l~~-~~~~~l~~~~~~L~~l~L~~n~i~~I~ 242 (329)
T 3sb4_A 170 FAF---IEGEPLETTIQVGAMG---KLEDEIMKAGLQPRDINFLTIEGKLDN-ADFKLIRDYMPNLVSLDISKTNATTIP 242 (329)
T ss_dssp SCE---EESCCCEEEEEECTTC---CHHHHHHHTTCCGGGCSEEEEEECCCH-HHHHHHHHHCTTCCEEECTTBCCCEEC
T ss_pred ccc---ccccccceeEEecCCC---cHHHHHhhcccCccccceEEEeeeecH-HHHHHHHHhcCCCeEEECCCCCcceec
Confidence 344 5566666 45554332 333333221 235666666655322 111111 23667777777777776666
Q ss_pred CccccCCCCCCEEEccCCcccccCCcccccccccc-cccccCccceecCCcccccccce-eeecccCcccCCCCcCCCCC
Q 041479 313 PISVGYLLKLQVLSLFENNISREIPSSLGNFTFLT-ELNLCGNSIRGSVPSALGSCHQL-WLDLSHNHLTGPIPLAVGNP 390 (771)
Q Consensus 313 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~l-~L~Ls~N~l~~~~p~~~~~l 390 (771)
+.+|.++++|+.|+|++| ++.+.+.+|.++++|+ .+++.+ .++.+.+.+|.+|..| .+++++|+++.+.+.+|.++
T Consensus 243 ~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I~~~aF~~~ 320 (329)
T 3sb4_A 243 DFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTLGDELFGNG 320 (329)
T ss_dssp TTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEECTTTTCTT
T ss_pred HhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCccchhhhcCC
Confidence 667777777777777776 6656666777777777 777776 6665666677777666 66777777766666677777
Q ss_pred CCCCeEE
Q 041479 391 KSIPHLD 397 (771)
Q Consensus 391 ~~L~~L~ 397 (771)
++|+.++
T Consensus 321 ~~L~~ly 327 (329)
T 3sb4_A 321 VPSKLIY 327 (329)
T ss_dssp CCCCEEE
T ss_pred cchhhhc
Confidence 7777665
No 369
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.77 E-value=1.6e-19 Score=212.42 Aligned_cols=192 Identities=20% Similarity=0.323 Sum_probs=113.4
Q ss_pred EccccccCCCCCcCcccccCCCCCcEEEccCccccccCChhhhhcccccceeecccCcCcccCcccccccCCcceEecCC
Q 041479 226 DFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSLSGTLPNSLANFSSHLRYLYMSANPISGSIPTEIGNLKNLIIIAIEK 305 (771)
Q Consensus 226 ~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~ 305 (771)
+++.|.+. ..|+.| ..+++|+.|+|++|.+. .+|..++.+. +|++|+|++|.|+ .+|..|+++++|+.|+|++
T Consensus 207 ~~~~n~~~-~~~~~~---~~l~~L~~L~Ls~n~l~-~l~~~~~~l~-~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~ 279 (727)
T 4b8c_D 207 DDIENRMV-MPKDSK---YDDQLWHALDLSNLQIF-NISANIFKYD-FLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSH 279 (727)
T ss_dssp -------------------CCCCCCEEECTTSCCS-CCCGGGGGCC-SCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTT
T ss_pred ccccccee-cChhhh---ccCCCCcEEECCCCCCC-CCChhhcCCC-CCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcC
Confidence 34445554 345444 66777888888888887 7777777765 7888888888888 7788888888888888888
Q ss_pred ccceeccCccccCCCCCCEEEccCCcccccCCcccccccccccccccCccceecCCcccccccce--eeecccCcccCCC
Q 041479 306 FILIRNIPISVGYLLKLQVLSLFENNISREIPSSLGNFTFLTELNLCGNSIRGSVPSALGSCHQL--WLDLSHNHLTGPI 383 (771)
Q Consensus 306 n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l--~L~Ls~N~l~~~~ 383 (771)
|.+. .+|..++.+++|++|+|++|.|+ .+|..|+.+++|++|+|++|+|++.+|..+..+... .++|++|.+++.+
T Consensus 280 N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~ 357 (727)
T 4b8c_D 280 NRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPL 357 (727)
T ss_dssp SCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_pred CcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcC
Confidence 8886 67888888888999999999887 678788889999999999999988888877665433 5788999998877
Q ss_pred CcCCCCCCCCCeEECCCC----cccccCCcchhhhhcccccccEEECcCCCCC
Q 041479 384 PLAVGNPKSIPHLDLSKN----ELSGEIPSSLAWIFGYISIFAKLNLSYNNLD 432 (771)
Q Consensus 384 p~~~~~l~~L~~L~Ls~N----~l~~~~p~~l~~~~~~l~~L~~L~Ls~N~l~ 432 (771)
|.. |+.|++++| ...+.+|......+..+..+....+++|-+.
T Consensus 358 p~~------l~~l~l~~n~~~~~~~~~l~~~~~~~~~~l~~~~~~~ls~Nil~ 404 (727)
T 4b8c_D 358 PHE------RRFIEINTDGEPQREYDSLQQSTEHLATDLAKRTFTVLSYNTLC 404 (727)
T ss_dssp CCC-----------------------------------------------CCC
T ss_pred ccc------cceeEeecccccccccCCccccccchhhcccccceeeeeccccc
Confidence 754 456677776 2233344333222334555566666777654
No 370
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.76 E-value=4e-18 Score=171.83 Aligned_cols=153 Identities=25% Similarity=0.293 Sum_probs=103.7
Q ss_pred CCCEEecccCcCcccCChhhhhCCCCCcEEEeecCcccccCCccccCCCCCCEEEccccccCCCCCcCcccccCCCCCcE
Q 041479 172 SMEYFHVSENQLVGELPPHIGFTLPNVRILLLAGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEV 251 (771)
Q Consensus 172 ~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~ 251 (771)
+.+.++.+++.++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|+.+.+..| .++++|++
T Consensus 20 s~~~v~c~~~~l~-~ip~~~~---~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~---~~l~~L~~ 92 (229)
T 3e6j_A 20 SGTTVDCRSKRHA-SVPAGIP---TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVF---DSLTQLTV 92 (229)
T ss_dssp ETTEEECTTSCCS-SCCSCCC---TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTT---TTCTTCCE
T ss_pred eCCEeEccCCCcC-ccCCCCC---CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhc---ccCCCcCE
Confidence 4567888888887 7887554 778888888888888778888888888888888888877665555 66677777
Q ss_pred EEccCccccccCChhhhhcccccceeecccCcCcccCcccccccCCcceEecCCccceeccCccccCCCCCCEEEccCCc
Q 041479 252 VSLSVNSLSGTLPNSLANFSSHLRYLYMSANPISGSIPTEIGNLKNLIIIAIEKFILIRNIPISVGYLLKLQVLSLFENN 331 (771)
Q Consensus 252 L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~ 331 (771)
|+|++|+|++..+..+..+. +|++|+|++|+|+ .+|..+.. +++|+.|+|++|+
T Consensus 93 L~Ls~N~l~~l~~~~~~~l~-~L~~L~Ls~N~l~-~lp~~~~~------------------------l~~L~~L~L~~N~ 146 (229)
T 3e6j_A 93 LDLGTNQLTVLPSAVFDRLV-HLKELFMCCNKLT-ELPRGIER------------------------LTHLTHLALDQNQ 146 (229)
T ss_dssp EECCSSCCCCCCTTTTTTCT-TCCEEECCSSCCC-SCCTTGGG------------------------CTTCSEEECCSSC
T ss_pred EECCCCcCCccChhHhCcch-hhCeEeccCCccc-ccCccccc------------------------CCCCCEEECCCCc
Confidence 77777777743333344444 6777777777766 44444444 4455555555555
Q ss_pred ccccCCcccccccccccccccCccce
Q 041479 332 ISREIPSSLGNFTFLTELNLCGNSIR 357 (771)
Q Consensus 332 l~~~~p~~~~~l~~L~~L~Ls~N~l~ 357 (771)
|++..+..|..+++|+.|+|++|.+.
T Consensus 147 l~~~~~~~~~~l~~L~~L~l~~N~~~ 172 (229)
T 3e6j_A 147 LKSIPHGAFDRLSSLTHAYLFGNPWD 172 (229)
T ss_dssp CCCCCTTTTTTCTTCCEEECTTSCBC
T ss_pred CCccCHHHHhCCCCCCEEEeeCCCcc
Confidence 55444445556666666666666655
No 371
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.75 E-value=2.8e-19 Score=184.34 Aligned_cols=171 Identities=22% Similarity=0.309 Sum_probs=121.9
Q ss_pred CCCCCCEEecccCcCcccCChhhhhCCCCCcEEEeecCcccccCCccccCCCCCCEEEccccccCCCCCcCcccccCCCC
Q 041479 169 NITSMEYFHVSENQLVGELPPHIGFTLPNVRILLLAGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTY 248 (771)
Q Consensus 169 ~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~ 248 (771)
++.+++.++++.|.++ .++ .+. .+++|+.|++++|+|+. +| .+..+++|+.|+|++|+|+++.+ + .++++
T Consensus 17 ~l~~l~~l~l~~~~i~-~~~-~~~-~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l---~~l~~ 86 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVT-DLV-SQK-ELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--L---KDLTK 86 (263)
T ss_dssp HHHHHHHHHHTCSCTT-SEE-CHH-HHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--G---TTCSS
T ss_pred HHHHHHHHHhcCCCcc-ccc-chh-hcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--h---ccCCC
Confidence 4555666777777777 555 232 66777778888777774 44 57777778888888887776544 3 66777
Q ss_pred CcEEEccCccccccCChhhhhcccccceeecccCcCcccCcccccccCCcceEecCCccceeccCccccCCCCCCEEEcc
Q 041479 249 LEVVSLSVNSLSGTLPNSLANFSSHLRYLYMSANPISGSIPTEIGNLKNLIIIAIEKFILIRNIPISVGYLLKLQVLSLF 328 (771)
Q Consensus 249 L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls 328 (771)
|++|+|++|+++ .+|.... ++|++|++++|+|++. + .+..+++|+.|++++|.+.+. + .+..+++|+.|+|+
T Consensus 87 L~~L~L~~N~l~-~l~~~~~---~~L~~L~L~~N~l~~~-~-~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~ 158 (263)
T 1xeu_A 87 LEELSVNRNRLK-NLNGIPS---ACLSRLFLDNNELRDT-D-SLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLH 158 (263)
T ss_dssp CCEEECCSSCCS-CCTTCCC---SSCCEEECCSSCCSBS-G-GGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECT
T ss_pred CCEEECCCCccC-CcCcccc---CcccEEEccCCccCCC-h-hhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECC
Confidence 788888888777 3444322 3688888888888753 3 477777888888888777554 3 57778888888888
Q ss_pred CCcccccCCcccccccccccccccCccceec
Q 041479 329 ENNISREIPSSLGNFTFLTELNLCGNSIRGS 359 (771)
Q Consensus 329 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 359 (771)
+|++++. ..+..+++|+.|++++|++++.
T Consensus 159 ~N~i~~~--~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 159 GNEITNT--GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp TSCCCBC--TTSTTCCCCCEEEEEEEEEECC
T ss_pred CCcCcch--HHhccCCCCCEEeCCCCcccCC
Confidence 8888755 6678888888888888888754
No 372
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.75 E-value=5.1e-19 Score=182.36 Aligned_cols=169 Identities=20% Similarity=0.272 Sum_probs=91.3
Q ss_pred CCCCCcEEEcCCCcccccCCccccCCCCCCEEecccCcCcccCCcccccCCcccccCCccccCCCCCCEEecccccCcCC
Q 041479 66 NLTFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNALQGQIPDSRLILNKLEGNIPSELGSLLKFKGLGLANNYFTGP 145 (771)
Q Consensus 66 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 145 (771)
.+.++..+++++|.+++ ++ .+..+++|++|++++|.++ .+| .+..+++|+.|+|++|+|++
T Consensus 17 ~l~~l~~l~l~~~~i~~-~~-~~~~l~~L~~L~l~~n~i~---------------~l~-~l~~l~~L~~L~L~~N~i~~- 77 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTD-LV-SQKELSGVQNFNGDNSNIQ---------------SLA-GMQFFTNLKELHLSHNQISD- 77 (263)
T ss_dssp HHHHHHHHHHTCSCTTS-EE-CHHHHTTCSEEECTTSCCC---------------CCT-TGGGCTTCCEEECCSSCCCC-
T ss_pred HHHHHHHHHhcCCCccc-cc-chhhcCcCcEEECcCCCcc---------------cch-HHhhCCCCCEEECCCCccCC-
Confidence 45556666677777764 33 4666677777777777654 233 45556666666666665552
Q ss_pred CCccceeeecccccccccCccccCCCCCCEEecccCcCcccCChhhhhCCCCCcEEEeecCcccccCCccccCCCCCCEE
Q 041479 146 IPHLNMFQVSVYSLTGSIPIQLLNITSMEYFHVSENQLVGELPPHIGFTLPNVRILLLAGNQFFGNIPHSISNASKLEWL 225 (771)
Q Consensus 146 lp~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 225 (771)
++. +.++++|++|++++|+++ .+|... . ++|+.|+|++|+|++. +.+..+++|+.|
T Consensus 78 -----------------~~~-l~~l~~L~~L~L~~N~l~-~l~~~~--~-~~L~~L~L~~N~l~~~--~~l~~l~~L~~L 133 (263)
T 1xeu_A 78 -----------------LSP-LKDLTKLEELSVNRNRLK-NLNGIP--S-ACLSRLFLDNNELRDT--DSLIHLKNLEIL 133 (263)
T ss_dssp -----------------CGG-GTTCSSCCEEECCSSCCS-CCTTCC--C-SSCCEEECCSSCCSBS--GGGTTCTTCCEE
T ss_pred -----------------Chh-hccCCCCCEEECCCCccC-CcCccc--c-CcccEEEccCCccCCC--hhhcCcccccEE
Confidence 222 555666666666666665 344322 1 5556666666655542 235555555555
Q ss_pred EccccccCCCCCcCcccccCCCCCcEEEccCccccccCChhhhhcccccceeecccCcCc
Q 041479 226 DFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSLSGTLPNSLANFSSHLRYLYMSANPIS 285 (771)
Q Consensus 226 ~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~ 285 (771)
+|++|+|+++ + . +..+++|+.|++++|++++. ..+..+. +|+.|++++|+++
T Consensus 134 ~Ls~N~i~~~-~-~---l~~l~~L~~L~L~~N~i~~~--~~l~~l~-~L~~L~l~~N~~~ 185 (263)
T 1xeu_A 134 SIRNNKLKSI-V-M---LGFLSKLEVLDLHGNEITNT--GGLTRLK-KVNWIDLTGQKCV 185 (263)
T ss_dssp ECTTSCCCBC-G-G---GGGCTTCCEEECTTSCCCBC--TTSTTCC-CCCEEEEEEEEEE
T ss_pred ECCCCcCCCC-h-H---HccCCCCCEEECCCCcCcch--HHhccCC-CCCEEeCCCCccc
Confidence 5555555543 1 1 24455555555555555532 3333333 4555555555554
No 373
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.73 E-value=6.5e-18 Score=166.11 Aligned_cols=154 Identities=19% Similarity=0.228 Sum_probs=77.6
Q ss_pred cCCCCCCEEecccCcCcccCChhhhhCCCCCcEEEeecCcccccCCccccCCCCCCEEEccccccCCCCCcCcccccCCC
Q 041479 168 LNITSMEYFHVSENQLVGELPPHIGFTLPNVRILLLAGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCT 247 (771)
Q Consensus 168 ~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~ 247 (771)
..+++|+.|++++|.++ .+| .+. .+++|++|++++|.++. +..+..+++|++|++++|++++..|..+ ..++
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~-~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~l---~~l~ 112 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIE-YAHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNL---SGLT 112 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGG-GCTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCCC---TTCT
T ss_pred hhcCCccEEeccCCCcc-ChH-HHh-cCCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChhh---cCCC
Confidence 34455555555555555 454 232 45555555555554431 2245555555555555555554333333 4444
Q ss_pred CCcEEEccCccccccCChhhhhcccccceeecccCcCcccCcccccccCCcceEecCCccceeccCccccCCCCCCEEEc
Q 041479 248 YLEVVSLSVNSLSGTLPNSLANFSSHLRYLYMSANPISGSIPTEIGNLKNLIIIAIEKFILIRNIPISVGYLLKLQVLSL 327 (771)
Q Consensus 248 ~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~L 327 (771)
+|++|++++|++++..|.. |+.+++|+.|++++|...+.+| .+..+++|+.|++
T Consensus 113 ~L~~L~Ls~n~i~~~~~~~-------------------------l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~l 166 (197)
T 4ezg_A 113 SLTLLDISHSAHDDSILTK-------------------------INTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNI 166 (197)
T ss_dssp TCCEEECCSSBCBGGGHHH-------------------------HTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEEC
T ss_pred CCCEEEecCCccCcHhHHH-------------------------HhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEEC
Confidence 5555555555554434444 4444444444444444223333 4555666666666
Q ss_pred cCCcccccCCcccccccccccccccCccce
Q 041479 328 FENNISREIPSSLGNFTFLTELNLCGNSIR 357 (771)
Q Consensus 328 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 357 (771)
++|+++. ++ .+..+++|++|++++|+|.
T Consensus 167 ~~n~i~~-~~-~l~~l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 167 QFDGVHD-YR-GIEDFPKLNQLYAFSQTIG 194 (197)
T ss_dssp TTBCCCC-CT-TGGGCSSCCEEEECBC---
T ss_pred CCCCCcC-hH-HhccCCCCCEEEeeCcccC
Confidence 6666653 33 5666666777777766664
No 374
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.73 E-value=3.6e-18 Score=175.43 Aligned_cols=133 Identities=20% Similarity=0.164 Sum_probs=101.1
Q ss_pred ccccccccceEEEEEecCCCeE--EEEEEeeccch------------------------hhHHHHHHHHHHHhccCCCCc
Q 041479 527 VSYESLVKATVYKGILDLDQTF--IAVKVLFLHQR------------------------GALKSFMAECQALRNIRHRNL 580 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~--vAvK~~~~~~~------------------------~~~~~~~~E~~~l~~l~H~nI 580 (771)
..+|+|.+|.||+|++..+++. ||||+++.... .....+.+|++++.+++|++|
T Consensus 53 ~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 132 (258)
T 1zth_A 53 GVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKEAGV 132 (258)
T ss_dssp EEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4689999999999999666778 99998754311 112468899999999988754
Q ss_pred --eeEEEEeecCCCCCceeEEEEEEeccC-C----CCCCCcccCCHHHHHHHHHHHHHHHHHHH-hcCCCCeEecCCCCC
Q 041479 581 --VKIITACSTSDFQGNYFRALVYEFMHH-G----SLESCPRILSFLRRLNIAIDVASALEYLH-HHCKKPIVHCDLKPS 652 (771)
Q Consensus 581 --v~l~~~~~~~~~~~~~~~~lv~e~~~~-g----~L~~~~~~l~~~~~~~i~~~ia~gL~~LH-~~~~~~ivHrdlk~~ 652 (771)
...+++ . ..++||||+.+ | +|.+.....++.+...++.|++.|+.||| +. +|+||||||+
T Consensus 133 ~~p~~~~~--~-------~~~lVmE~~g~~g~~~~~L~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---givHrDlkp~ 200 (258)
T 1zth_A 133 SVPQPYTY--M-------KNVLLMEFIGEDELPAPTLVELGRELKELDVEGIFNDVVENVKRLYQEA---ELVHADLSEY 200 (258)
T ss_dssp CCCCEEEE--E-------TTEEEEECCEETTEECCBHHHHGGGGGGSCHHHHHHHHHHHHHHHHHTS---CEECSSCSTT
T ss_pred CCCeEEEc--C-------CCEEEEEecCCCCCccccHHHHhhccChHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHH
Confidence 444432 1 24899999942 4 34333222334567899999999999999 64 9999999999
Q ss_pred CeeeCCCCceEEecccCcccc
Q 041479 653 NVLLDNDMTAHMGDFGLTRFI 673 (771)
Q Consensus 653 NILl~~~~~~kl~DfGla~~~ 673 (771)
|||++. .++|+|||+|...
T Consensus 201 NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 201 NIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp SEEESS--SEEECCCTTCEET
T ss_pred HEEEcC--cEEEEECcccccC
Confidence 999998 8999999999754
No 375
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.72 E-value=1.8e-17 Score=163.01 Aligned_cols=151 Identities=13% Similarity=0.205 Sum_probs=123.2
Q ss_pred CCCccceeeecccccccccCccccCCCCCCEEecccCcCcccCChhhhhCCCCCcEEEeecCcccccCCccccCCCCCCE
Q 041479 145 PIPHLNMFQVSVYSLTGSIPIQLLNITSMEYFHVSENQLVGELPPHIGFTLPNVRILLLAGNQFFGNIPHSISNASKLEW 224 (771)
Q Consensus 145 ~lp~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 224 (771)
.++.|+.+++++|.++ .+| .+..+++|++|++++|.++ .++ .+. .+++|++|++++|++++..|..|..+++|++
T Consensus 42 ~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~-~~~-~l~-~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 42 QMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT-NYN-PIS-GLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS-CCG-GGT-TCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC-cch-hhh-cCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 4567999999999998 556 6899999999999999886 554 454 8999999999999999888999999999999
Q ss_pred EEccccccCCCCCcCcccccCCCCCcEEEccCcc-ccccCChhhhhcccccceeecccCcCcccCcccccccCCcceEec
Q 041479 225 LDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNS-LSGTLPNSLANFSSHLRYLYMSANPISGSIPTEIGNLKNLIIIAI 303 (771)
Q Consensus 225 L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~-l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 303 (771)
|++++|++++..|..+ ..+++|++|++++|. ++ .+| .+..++ +|++|++++|++++ ++ .+..+++|+.|++
T Consensus 117 L~Ls~n~i~~~~~~~l---~~l~~L~~L~L~~n~~i~-~~~-~l~~l~-~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l 188 (197)
T 4ezg_A 117 LDISHSAHDDSILTKI---NTLPKVNSIDLSYNGAIT-DIM-PLKTLP-ELKSLNIQFDGVHD-YR-GIEDFPKLNQLYA 188 (197)
T ss_dssp EECCSSBCBGGGHHHH---TTCSSCCEEECCSCTBCC-CCG-GGGGCS-SCCEEECTTBCCCC-CT-TGGGCSSCCEEEE
T ss_pred EEecCCccCcHhHHHH---hhCCCCCEEEccCCCCcc-ccH-hhcCCC-CCCEEECCCCCCcC-hH-HhccCCCCCEEEe
Confidence 9999999998666655 788999999999998 65 666 567765 79999999999884 33 5666666666666
Q ss_pred CCccc
Q 041479 304 EKFIL 308 (771)
Q Consensus 304 ~~n~l 308 (771)
++|++
T Consensus 189 ~~N~i 193 (197)
T 4ezg_A 189 FSQTI 193 (197)
T ss_dssp CBC--
T ss_pred eCccc
Confidence 65554
No 376
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.72 E-value=1.6e-17 Score=162.53 Aligned_cols=130 Identities=22% Similarity=0.234 Sum_probs=79.0
Q ss_pred cceeecccCcCcccCcccccccCCcceEecCCccceeccCc-cccCCCCCCEEEccCCcccccCCccccccccccccccc
Q 041479 274 LRYLYMSANPISGSIPTEIGNLKNLIIIAIEKFILIRNIPI-SVGYLLKLQVLSLFENNISREIPSSLGNFTFLTELNLC 352 (771)
Q Consensus 274 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 352 (771)
-+.+++++|.++ .+|..+.. +|+.|++++|.+.+..+. .+..+++|++|+|++|+|++..|..|..+++|++|+|+
T Consensus 10 ~~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 86 (192)
T 1w8a_A 10 GTTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLG 86 (192)
T ss_dssp TTEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CCEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECC
Confidence 367888888886 55654433 666666666666554443 35666666666666666666656666666666666666
Q ss_pred CccceecCCcccccccce-eeecccCcccCCCCcCCCCCCCCCeEECCCCccccc
Q 041479 353 GNSIRGSVPSALGSCHQL-WLDLSHNHLTGPIPLAVGNPKSIPHLDLSKNELSGE 406 (771)
Q Consensus 353 ~N~l~~~~p~~~~~l~~l-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 406 (771)
+|+|++..+..|..++.| .|+|++|+|++..|..|..+++|++|+|++|++++.
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 141 (192)
T 1w8a_A 87 ENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCN 141 (192)
T ss_dssp SCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCS
T ss_pred CCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCc
Confidence 666665555555555555 555555555555555555555555555555555543
No 377
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.70 E-value=4.5e-17 Score=159.30 Aligned_cols=127 Identities=22% Similarity=0.267 Sum_probs=60.0
Q ss_pred cEEEccCccccccCChhhhhcccccceeecccCcCcccCcc-cccccCCcceEecCCccceeccCccccCCCCCCEEEcc
Q 041479 250 EVVSLSVNSLSGTLPNSLANFSSHLRYLYMSANPISGSIPT-EIGNLKNLIIIAIEKFILIRNIPISVGYLLKLQVLSLF 328 (771)
Q Consensus 250 ~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls 328 (771)
+.+++++|.++ .+|..+.. +|++|++++|+|++..+. .|..+++|+.|++++|.+.+..|..|..+++|++|+|+
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~---~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls 86 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL---HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLG 86 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT---TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CEEEcCCCCcC-cCccCCCC---CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECC
Confidence 34444555443 44443321 344455555554433332 24444555555555554444444444444555555555
Q ss_pred CCcccccCCcccccccccccccccCccceecCCcccccccce-eeecccCccc
Q 041479 329 ENNISREIPSSLGNFTFLTELNLCGNSIRGSVPSALGSCHQL-WLDLSHNHLT 380 (771)
Q Consensus 329 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l-~L~Ls~N~l~ 380 (771)
+|+|++..|..|..+++|++|+|++|+|++..|..+..++.| .|+|++|.++
T Consensus 87 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 139 (192)
T 1w8a_A 87 ENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFN 139 (192)
T ss_dssp SCCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBC
T ss_pred CCcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCcc
Confidence 555544444444444555555555555544444444444444 4455555444
No 378
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.69 E-value=1.8e-17 Score=176.79 Aligned_cols=227 Identities=12% Similarity=0.088 Sum_probs=145.7
Q ss_pred cCChhhhhC--------CCCCcEEEeecCcccccCCccccCCCCCCEEEccccccCCCCCcCcccccCCCCCcEEEccCc
Q 041479 186 ELPPHIGFT--------LPNVRILLLAGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVN 257 (771)
Q Consensus 186 ~lp~~~~~~--------l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N 257 (771)
.+|+..|.+ +++|+.|+|++ .++.+.+.+|.++++|+.|++++|.++.+.+.+| .++.++..+.+..+
T Consensus 83 ~I~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF---~~~~~l~~l~~~~~ 158 (329)
T 3sb4_A 83 FVPAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEAL---ADSVTAIFIPLGSS 158 (329)
T ss_dssp EECTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSS---CTTTCEEEECTTCT
T ss_pred ccCHHHhcccccccccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhh---cCCCceEEecCcch
Confidence 455666666 78888888888 7777777788888888888888888877766666 55666666665553
Q ss_pred ccc----ccCChhhhhcccccc-eeecccCcCcccCccc----ccccCCcceEecCCccceeccCccccCCCCCCEEEcc
Q 041479 258 SLS----GTLPNSLANFSSHLR-YLYMSANPISGSIPTE----IGNLKNLIIIAIEKFILIRNIPISVGYLLKLQVLSLF 328 (771)
Q Consensus 258 ~l~----~~~p~~~~~l~~~L~-~L~Ls~N~l~~~~p~~----~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls 328 (771)
... ..-+..|.... +|+ .+.+.... .++.. -....++..+.+.++........-...+++|+.|+|+
T Consensus 159 ~~~~~~~~i~~~~f~~~~-~L~~~i~~~~~~---~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~ 234 (329)
T 3sb4_A 159 DAYRFKNRWEHFAFIEGE-PLETTIQVGAMG---KLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDIS 234 (329)
T ss_dssp HHHHTSTTTTTSCEEESC-CCEEEEEECTTC---CHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECT
T ss_pred hhhhcccccccccccccc-ccceeEEecCCC---cHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECC
Confidence 221 00111122221 233 23232211 11111 1123444555554432111111111237889999999
Q ss_pred CCcccccCCcccccccccccccccCccceecCCcccccccce--eeecccCcccCCCCcCCCCCCCCCeEECCCCccccc
Q 041479 329 ENNISREIPSSLGNFTFLTELNLCGNSIRGSVPSALGSCHQL--WLDLSHNHLTGPIPLAVGNPKSIPHLDLSKNELSGE 406 (771)
Q Consensus 329 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l--~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 406 (771)
+|+++.+.+.+|.++++|+.|+|.+| ++.+.+.+|..|..| .+++.+ +++.+.+.+|.++++|+.+++++|+++..
T Consensus 235 ~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~i~~I 312 (329)
T 3sb4_A 235 KTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDKITTL 312 (329)
T ss_dssp TBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSCCCEE
T ss_pred CCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCccCcc
Confidence 88888777778889999999999888 777788888888877 588877 77777778888888888888888888855
Q ss_pred CCcchhhhhcccccccEEEC
Q 041479 407 IPSSLAWIFGYISIFAKLNL 426 (771)
Q Consensus 407 ~p~~l~~~~~~l~~L~~L~L 426 (771)
.+.+ |.++++|+.|+.
T Consensus 313 ~~~a----F~~~~~L~~ly~ 328 (329)
T 3sb4_A 313 GDEL----FGNGVPSKLIYK 328 (329)
T ss_dssp CTTT----TCTTCCCCEEEC
T ss_pred chhh----hcCCcchhhhcc
Confidence 5554 447888887763
No 379
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.65 E-value=4.4e-15 Score=162.02 Aligned_cols=267 Identities=11% Similarity=0.071 Sum_probs=178.3
Q ss_pred cCCCCCcEEEcCCCcccccCCccccCCCCCCEEecccCcCcccCCcccccCCcccccCCccccCCCCCCEEecccccCcC
Q 041479 65 GNLTFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNALQGQIPDSRLILNKLEGNIPSELGSLLKFKGLGLANNYFTG 144 (771)
Q Consensus 65 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 144 (771)
..+..++.+.+.+ .++.+-..+|.+. +|+.+++..| ++ ..-...|.+ .+|+.+.+.+ .++
T Consensus 110 ~~~~~l~~i~ip~-~i~~I~~~aF~~~-~L~~i~l~~~-i~--------------~I~~~aF~~-~~L~~i~lp~-~l~- 169 (401)
T 4fdw_A 110 EILKGYNEIILPN-SVKSIPKDAFRNS-QIAKVVLNEG-LK--------------SIGDMAFFN-STVQEIVFPS-TLE- 169 (401)
T ss_dssp EECSSCSEEECCT-TCCEECTTTTTTC-CCSEEECCTT-CC--------------EECTTTTTT-CCCCEEECCT-TCC-
T ss_pred EecCCccEEEECC-ccCEehHhhcccC-CccEEEeCCC-cc--------------EECHHhcCC-CCceEEEeCC-Ccc-
Confidence 3456677777764 3555566677774 6888887665 33 133345555 3577776654 222
Q ss_pred CCCccceeeecccccccccCccccCCCCCCEEecccCcCcccCChhhhhCCCCCcEEEeecCcccccCCccccCCCCCCE
Q 041479 145 PIPHLNMFQVSVYSLTGSIPIQLLNITSMEYFHVSENQLVGELPPHIGFTLPNVRILLLAGNQFFGNIPHSISNASKLEW 224 (771)
Q Consensus 145 ~lp~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 224 (771)
..-+..|.++++|+.++++.|+++ .+|...| ...+|+.+.|..| ++.+...+|.++++|+.
T Consensus 170 ----------------~I~~~aF~~c~~L~~l~l~~n~l~-~I~~~aF-~~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~ 230 (401)
T 4fdw_A 170 ----------------QLKEDIFYYCYNLKKADLSKTKIT-KLPASTF-VYAGIEEVLLPVT-LKEIGSQAFLKTSQLKT 230 (401)
T ss_dssp ----------------EECSSTTTTCTTCCEEECTTSCCS-EECTTTT-TTCCCSEEECCTT-CCEECTTTTTTCTTCCC
T ss_pred ----------------EehHHHhhCcccCCeeecCCCcce-EechhhE-eecccCEEEeCCc-hheehhhHhhCCCCCCE
Confidence 233456777788888888888877 7777777 3577888888744 66677777888888888
Q ss_pred EEccccccCCCCCcCcccccCCCCCcEEEccCccccccCChhhhhcccccceeecccCcCc-----ccCcccccccCCcc
Q 041479 225 LDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSLSGTLPNSLANFSSHLRYLYMSANPIS-----GSIPTEIGNLKNLI 299 (771)
Q Consensus 225 L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~-----~~~p~~~~~l~~L~ 299 (771)
+++..| ++.+...+| .+ .+|+.+.+ .|.++..-+..|.++ ++|+.+++.+|.+. .+.+..|.++++|+
T Consensus 231 l~l~~~-l~~I~~~aF---~~-~~L~~i~l-p~~i~~I~~~aF~~c-~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~ 303 (401)
T 4fdw_A 231 IEIPEN-VSTIGQEAF---RE-SGITTVKL-PNGVTNIASRAFYYC-PELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLA 303 (401)
T ss_dssp EECCTT-CCEECTTTT---TT-CCCSEEEE-ETTCCEECTTTTTTC-TTCCEEEEESSCCCCCTTCEECTTTTTTCTTCC
T ss_pred EecCCC-ccCcccccc---cc-CCccEEEe-CCCccEEChhHhhCC-CCCCEEEeCCccccCCcccEECHHHhhCCccCC
Confidence 888765 555555555 44 56777777 344552333444444 36888888777664 45567788888888
Q ss_pred eEecCCccceeccCccccCCCCCCEEEccCCcccccCCcccccccccccccccCccceecCCccccccc-ce-eeecccC
Q 041479 300 IIAIEKFILIRNIPISVGYLLKLQVLSLFENNISREIPSSLGNFTFLTELNLCGNSIRGSVPSALGSCH-QL-WLDLSHN 377 (771)
Q Consensus 300 ~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~l-~L~Ls~N 377 (771)
.+.+.+ .+...-..+|.++++|+.++|..| ++.+.+.+|.++ +|+.+++++|.+....+..|..+. .+ .|++..|
T Consensus 304 ~l~l~~-~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~l~~n~~~~l~~~~F~~~~~~l~~l~vp~~ 380 (401)
T 4fdw_A 304 RFEIPE-SIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVKVEGTTPPQVFEKVWYGFPDDITVIRVPAE 380 (401)
T ss_dssp EECCCT-TCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEEECCSSCCBCCCSSCCCSCTTCCEEEECGG
T ss_pred eEEeCC-ceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEEEcCCCCcccccccccCCCCCccEEEeCHH
Confidence 888874 465666677888888888888554 666667788888 888888888888766667777664 34 5666666
Q ss_pred ccc
Q 041479 378 HLT 380 (771)
Q Consensus 378 ~l~ 380 (771)
.+.
T Consensus 381 ~~~ 383 (401)
T 4fdw_A 381 SVE 383 (401)
T ss_dssp GHH
T ss_pred HHH
Confidence 543
No 380
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.64 E-value=4.3e-16 Score=148.79 Aligned_cols=38 Identities=13% Similarity=0.127 Sum_probs=19.5
Q ss_pred CCCcEEEcCCCccc-ccCCccccCCCCCCEEecccCcCc
Q 041479 68 TFLRLINLQQNNFS-SNIPHEIGRLFRLRHIIFNSNALQ 105 (771)
Q Consensus 68 ~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~ 105 (771)
++|++|+|++|.++ +.+|..|..+++|++|++++|.++
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~ 62 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLI 62 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCC
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCC
Confidence 44555555555554 334544555555555555555543
No 381
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.64 E-value=3.8e-16 Score=152.73 Aligned_cols=113 Identities=27% Similarity=0.284 Sum_probs=71.6
Q ss_pred CCCEEEccCCcccccCCcccccccccccccccCccceecCCcccccccce-eeecccCcccCCCCcCCCCCCCCCeEECC
Q 041479 321 KLQVLSLFENNISREIPSSLGNFTFLTELNLCGNSIRGSVPSALGSCHQL-WLDLSHNHLTGPIPLAVGNPKSIPHLDLS 399 (771)
Q Consensus 321 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 399 (771)
+|++|+|++|+|+ .+|..|..+++|++|+|++|+|++..+..|..++.| .|+|++|+|++..|..|..+++|++|+|+
T Consensus 32 ~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~ 110 (193)
T 2wfh_A 32 DVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLH 110 (193)
T ss_dssp TCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECC
Confidence 4555555555555 445555555666666666666655555556666555 56666666666666677777777777777
Q ss_pred CCcccccCCcchhhhhcccccccEEECcCCCCCCCCCcc
Q 041479 400 KNELSGEIPSSLAWIFGYISIFAKLNLSYNNLDGDVPRK 438 (771)
Q Consensus 400 ~N~l~~~~p~~l~~~~~~l~~L~~L~Ls~N~l~~~~p~~ 438 (771)
+|+|+...+..+. .+++|+.|+|++|++.|.+.-.
T Consensus 111 ~N~l~~~~~~~~~----~l~~L~~L~L~~N~~~C~c~l~ 145 (193)
T 2wfh_A 111 GNDISVVPEGAFN----DLSALSHLAIGANPLYCDCNMQ 145 (193)
T ss_dssp SSCCCBCCTTTTT----TCTTCCEEECCSSCEECSGGGH
T ss_pred CCCCCeeChhhhh----cCccccEEEeCCCCeecCCcCH
Confidence 7777754444433 6777777888888777766543
No 382
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.63 E-value=9.3e-16 Score=146.43 Aligned_cols=108 Identities=22% Similarity=0.245 Sum_probs=68.8
Q ss_pred CCCCcEEEeecCccc-ccCCccccCCCCCCEEEccccccCCCCCcCcccccCCCCCcEEEccCccccccCChhhhhcccc
Q 041479 195 LPNVRILLLAGNQFF-GNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSLSGTLPNSLANFSSH 273 (771)
Q Consensus 195 l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~ 273 (771)
.++|+.|++++|+|+ +.+|..|..+++|++|++++|.|++. ..+ ..+++|++|++++|++++.+|..+..++ +
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~---~~l~~L~~L~Ls~N~l~~~~~~~~~~l~-~ 96 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNL---PKLPKLKKLELSENRIFGGLDMLAEKLP-N 96 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSC---CCCSSCCEEEEESCCCCSCCCHHHHHCT-T
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhh---ccCCCCCEEECcCCcCchHHHHHHhhCC-C
Confidence 356777777777776 55666677777777777777777755 333 6667777777777777755666655554 6
Q ss_pred cceeecccCcCcccCc-ccccccCCcceEecCCccc
Q 041479 274 LRYLYMSANPISGSIP-TEIGNLKNLIIIAIEKFIL 308 (771)
Q Consensus 274 L~~L~Ls~N~l~~~~p-~~~~~l~~L~~L~l~~n~l 308 (771)
|++|++++|+|++..+ ..+..+++|+.|++++|.+
T Consensus 97 L~~L~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l 132 (168)
T 2ell_A 97 LTHLNLSGNKLKDISTLEPLKKLECLKSLDLFNCEV 132 (168)
T ss_dssp CCEEECBSSSCCSSGGGGGGSSCSCCCEEECCSSGG
T ss_pred CCEEeccCCccCcchhHHHHhcCCCCCEEEeeCCcC
Confidence 8888888887774321 3444444444444444433
No 383
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.62 E-value=8.9e-15 Score=159.60 Aligned_cols=222 Identities=16% Similarity=0.148 Sum_probs=107.7
Q ss_pred ccccCCCCCCEEecccCcCcccCChhhhhCCCCCcEEEeecCcccccCCccccCCCCCCEEEccccccCCCCCcCccccc
Q 041479 165 IQLLNITSMEYFHVSENQLVGELPPHIGFTLPNVRILLLAGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLV 244 (771)
Q Consensus 165 ~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 244 (771)
..|.+. +|+.+.+..| ++ .++...|.+ .+|+.+.+.. .++.+.+.+|.++++|+.++|++|+++.+...+| .
T Consensus 130 ~aF~~~-~L~~i~l~~~-i~-~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF---~ 201 (401)
T 4fdw_A 130 DAFRNS-QIAKVVLNEG-LK-SIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTF---V 201 (401)
T ss_dssp TTTTTC-CCSEEECCTT-CC-EECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTT---T
T ss_pred hhcccC-CccEEEeCCC-cc-EECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhE---e
Confidence 344442 4555555544 44 455555533 3455555553 4444555555555555555555555554444443 2
Q ss_pred CCCCCcEEEccCccccccCCh-hhhhcccccceeecccCcCcccCcccccccCCcceEecCCccceeccCccccCCCCCC
Q 041479 245 NCTYLEVVSLSVNSLSGTLPN-SLANFSSHLRYLYMSANPISGSIPTEIGNLKNLIIIAIEKFILIRNIPISVGYLLKLQ 323 (771)
Q Consensus 245 ~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~ 323 (771)
+++|+.+.+..+ ++ .++. .|.+. ++|+.+++..| ++.+...+|.+ .+|+.+.+. +.+...-+.+|..+++|+
T Consensus 202 -~~~L~~l~lp~~-l~-~I~~~aF~~~-~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~lp-~~i~~I~~~aF~~c~~L~ 274 (401)
T 4fdw_A 202 -YAGIEEVLLPVT-LK-EIGSQAFLKT-SQLKTIEIPEN-VSTIGQEAFRE-SGITTVKLP-NGVTNIASRAFYYCPELA 274 (401)
T ss_dssp -TCCCSEEECCTT-CC-EECTTTTTTC-TTCCCEECCTT-CCEECTTTTTT-CCCSEEEEE-TTCCEECTTTTTTCTTCC
T ss_pred -ecccCEEEeCCc-hh-eehhhHhhCC-CCCCEEecCCC-ccCcccccccc-CCccEEEeC-CCccEEChhHhhCCCCCC
Confidence 345555555533 44 2222 22232 24555555543 33344444544 455555552 233333444555555555
Q ss_pred EEEccCCccc-----ccCCcccccccccccccccCccceecCCcccccccce-eeecccCcccCCCCcCCCCCCCCCeEE
Q 041479 324 VLSLFENNIS-----REIPSSLGNFTFLTELNLCGNSIRGSVPSALGSCHQL-WLDLSHNHLTGPIPLAVGNPKSIPHLD 397 (771)
Q Consensus 324 ~L~Ls~N~l~-----~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l-~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 397 (771)
.+++.+|.+. ...+..|.++++|+.++|. |.++.+...+|.+|..| .++|..| ++.+.+.+|.++ +|+.++
T Consensus 275 ~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~-~L~~l~ 351 (401)
T 4fdw_A 275 EVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNT-GIKEVK 351 (401)
T ss_dssp EEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTTSSSSS-CCCEEE
T ss_pred EEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCC-CCCEEE
Confidence 5555554443 2344455555555555555 23444444555555555 4555333 444444455555 555555
Q ss_pred CCCCccc
Q 041479 398 LSKNELS 404 (771)
Q Consensus 398 Ls~N~l~ 404 (771)
+++|.+.
T Consensus 352 l~~n~~~ 358 (401)
T 4fdw_A 352 VEGTTPP 358 (401)
T ss_dssp ECCSSCC
T ss_pred EcCCCCc
Confidence 5555444
No 384
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.62 E-value=1.8e-15 Score=147.92 Aligned_cols=126 Identities=31% Similarity=0.375 Sum_probs=86.7
Q ss_pred CEEecccCcCcccCChhhhhCCCCCcEEEeecCcccccCCccccCCCCCCEEEccccccCCCCCcCcccccCCCCCcEEE
Q 041479 174 EYFHVSENQLVGELPPHIGFTLPNVRILLLAGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEVVS 253 (771)
Q Consensus 174 ~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~ 253 (771)
+.+++++|+++ .+|..++ ++|+.|+|++|+|+ .+|..|.++++|+.|+|++|+|+++.+..| .++++|++|+
T Consensus 13 ~~l~~~~~~l~-~ip~~~~---~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f---~~l~~L~~L~ 84 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP---RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSF---SNMTQLLTLI 84 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC---TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTT---TTCTTCCEEE
T ss_pred CEEEcCCCCCC-cCCCCCC---CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHc---cCCCCCCEEE
Confidence 56788888887 7776554 57888888888887 566778888888888888888887766655 6667777777
Q ss_pred ccCccccccCChhhhhcccccceeecccCcCcccCcccccccCCcceEecCCccc
Q 041479 254 LSVNSLSGTLPNSLANFSSHLRYLYMSANPISGSIPTEIGNLKNLIIIAIEKFIL 308 (771)
Q Consensus 254 Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l 308 (771)
|++|+|++..|..|..+. +|++|+|++|+|++..+..|..+++|+.|++++|.+
T Consensus 85 Ls~N~l~~i~~~~f~~l~-~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~ 138 (193)
T 2wfh_A 85 LSYNRLRCIPPRTFDGLK-SLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPL 138 (193)
T ss_dssp CCSSCCCBCCTTTTTTCT-TCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCE
T ss_pred CCCCccCEeCHHHhCCCC-CCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCe
Confidence 777777755555565554 677777777777654444555555555555544444
No 385
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.60 E-value=1.1e-15 Score=142.80 Aligned_cols=38 Identities=8% Similarity=0.050 Sum_probs=21.6
Q ss_pred CCCcEEEcCCCccc-ccCCccccCCCCCCEEecccCcCc
Q 041479 68 TFLRLINLQQNNFS-SNIPHEIGRLFRLRHIIFNSNALQ 105 (771)
Q Consensus 68 ~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~ 105 (771)
++|+.|++++|.++ +.+|..|..+++|++|++++|.++
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~ 55 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLT 55 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCC
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCC
Confidence 45556666666655 445555555555555555555543
No 386
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.60 E-value=4.3e-15 Score=143.14 Aligned_cols=128 Identities=16% Similarity=0.155 Sum_probs=81.1
Q ss_pred CCEEecccCcCcccCChhhhhCCCCCcEEEeecCcccccCCccccCCCCCCEEEccccccCCCCCcCcccccCCCCCcEE
Q 041479 173 MEYFHVSENQLVGELPPHIGFTLPNVRILLLAGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEVV 252 (771)
Q Consensus 173 L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L 252 (771)
.+.+++++|+++ .+|..++ ++|+.|++++|++++..+..|..+++|++|+|++|+|+++.+..| .++++|++|
T Consensus 9 ~~~l~~~~~~l~-~~p~~~~---~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~---~~l~~L~~L 81 (177)
T 2o6r_A 9 GTEIRCNSKGLT-SVPTGIP---SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVF---DKLTKLTIL 81 (177)
T ss_dssp TTEEECCSSCCS-SCCTTCC---TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTT---TTCTTCCEE
T ss_pred CCEEEecCCCCc-cCCCCCC---CCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHc---cCCCccCEE
Confidence 466777777777 6775443 577777777777776666667777777777777777776655544 566677777
Q ss_pred EccCccccccCChhhhhcccccceeecccCcCcccCcccccccCCcceEecCCccc
Q 041479 253 SLSVNSLSGTLPNSLANFSSHLRYLYMSANPISGSIPTEIGNLKNLIIIAIEKFIL 308 (771)
Q Consensus 253 ~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l 308 (771)
++++|+|++..+..+..+. +|++|++++|+|++..+..|..+++|+.|++++|.+
T Consensus 82 ~l~~N~l~~~~~~~~~~l~-~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~ 136 (177)
T 2o6r_A 82 YLHENKLQSLPNGVFDKLT-QLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPW 136 (177)
T ss_dssp ECCSSCCCCCCTTTTTTCT-TCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCB
T ss_pred ECCCCCccccCHHHhhCCc-ccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCe
Confidence 7777777644333344443 566666666666644444444444444444444443
No 387
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.59 E-value=2.1e-15 Score=140.89 Aligned_cols=106 Identities=25% Similarity=0.278 Sum_probs=65.6
Q ss_pred CCCcEEEeecCccc-ccCCccccCCCCCCEEEccccccCCCCCcCcccccCCCCCcEEEccCccccccCChhhhhccccc
Q 041479 196 PNVRILLLAGNQFF-GNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSLSGTLPNSLANFSSHL 274 (771)
Q Consensus 196 ~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L 274 (771)
++|+.|++++|.++ +.+|..+..+++|++|++++|.+++. .. +..+++|++|++++|++++.+|..+..+. +|
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~---~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~-~L 90 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--AN---LPKLNKLKKLELSDNRVSGGLEVLAEKCP-NL 90 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TT---CCCCTTCCEEECCSSCCCSCTHHHHHHCT-TC
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hh---hhcCCCCCEEECCCCcccchHHHHhhhCC-CC
Confidence 56777777777776 56666777777777777777777755 23 36667777777777777755665555554 67
Q ss_pred ceeecccCcCccc-CcccccccCCcceEecCCcc
Q 041479 275 RYLYMSANPISGS-IPTEIGNLKNLIIIAIEKFI 307 (771)
Q Consensus 275 ~~L~Ls~N~l~~~-~p~~~~~l~~L~~L~l~~n~ 307 (771)
++|++++|++++. .+..+..+++|+.|++++|.
T Consensus 91 ~~L~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~ 124 (149)
T 2je0_A 91 THLNLSGNKIKDLSTIEPLKKLENLKSLDLFNCE 124 (149)
T ss_dssp CEEECTTSCCCSHHHHGGGGGCTTCCEEECTTCG
T ss_pred CEEECCCCcCCChHHHHHHhhCCCCCEEeCcCCc
Confidence 7777777777642 12334444433333333333
No 388
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.58 E-value=6e-15 Score=142.09 Aligned_cols=62 Identities=21% Similarity=0.204 Sum_probs=29.5
Q ss_pred eeecccCcccCCCCcCCCCCCCCCeEECCCCcccccCCcchhhhhcccccccEEECcCCCCCCCCC
Q 041479 371 WLDLSHNHLTGPIPLAVGNPKSIPHLDLSKNELSGEIPSSLAWIFGYISIFAKLNLSYNNLDGDVP 436 (771)
Q Consensus 371 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~l~~L~~L~Ls~N~l~~~~p 436 (771)
.|++++|++++..+..|..+++|++|+|++|+|++..+..+ ..+++|+.|+|++|+++|.+|
T Consensus 80 ~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~----~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 80 ILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIF----DRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTT----TTCTTCCEEECCSSCBCCCHH
T ss_pred EEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHh----cCCcccCEEEecCCCeeccCc
Confidence 33333333333334444455555555555555553333222 245555555555555555544
No 389
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.55 E-value=3.8e-17 Score=160.71 Aligned_cols=65 Identities=28% Similarity=0.294 Sum_probs=31.5
Q ss_pred cCCCCCCEEecccCcCcccCChhhhhCCCCCcEEEeecCcccccCC-ccccCCCCCCEEEccccccCCC
Q 041479 168 LNITSMEYFHVSENQLVGELPPHIGFTLPNVRILLLAGNQFFGNIP-HSISNASKLEWLDFANNSLTGL 235 (771)
Q Consensus 168 ~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~ 235 (771)
..+++|++|++++|+++ .+| .+. .+++|++|++++|+|++..+ ..+..+++|++|++++|.+++.
T Consensus 90 ~~~~~L~~L~L~~N~l~-~l~-~~~-~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~ 155 (198)
T 1ds9_A 90 AVADTLEELWISYNQIA-SLS-GIE-KLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYND 155 (198)
T ss_dssp HHHHHCSEEEEEEEECC-CHH-HHH-HHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHH
T ss_pred hcCCcCCEEECcCCcCC-cCC-ccc-cCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccc
Confidence 33444555555555554 233 222 44555555555555553222 2455555555555555555544
No 390
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.54 E-value=3.8e-13 Score=147.09 Aligned_cols=311 Identities=11% Similarity=0.032 Sum_probs=167.2
Q ss_pred CcccCCccccCCCCCcEEEcCCCcccccCCccccCCCCCCEEecccCcCcccCCcccccCCcccccCCccccCCCCCCEE
Q 041479 56 LTGTASPYIGNLTFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNALQGQIPDSRLILNKLEGNIPSELGSLLKFKGL 135 (771)
Q Consensus 56 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~l~~n~l~~~~p~~~~~l~~L~~L 135 (771)
++.+...+|.++++|+.+.|.. .++.+-..+|.++++|+.++|..+ ++ ..-...|.++.+|+.+
T Consensus 59 VtsIg~~AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~--------------~I~~~aF~~c~~L~~i 122 (394)
T 4fs7_A 59 VVSIGYAAFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VK--------------MIGRCTFSGCYALKSI 122 (394)
T ss_dssp EEEECTTTTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CC--------------EECTTTTTTCTTCCCC
T ss_pred EeEhHHHHhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ce--------------Eccchhhcccccchhh
Confidence 5556677888888899998874 477666778888999998888755 22 1233456677777766
Q ss_pred ecccccCc---CCCCcccee-eecccccccccCccccCCCCCCEEecccCcCcccCChhhhhCCCCCcEEEeecCccccc
Q 041479 136 GLANNYFT---GPIPHLNMF-QVSVYSLTGSIPIQLLNITSMEYFHVSENQLVGELPPHIGFTLPNVRILLLAGNQFFGN 211 (771)
Q Consensus 136 ~Ls~N~l~---~~lp~L~~l-~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~ 211 (771)
.+..+--. ..+...... ......+...-...|.++++|+.+.+.++. . .++...|.++++|+.+.+..| ++.+
T Consensus 123 ~~p~~l~~i~~~aF~~~~~~~~~~~~~~~~i~~~aF~~c~~L~~i~l~~~~-~-~I~~~~F~~c~~L~~i~l~~~-~~~I 199 (394)
T 4fs7_A 123 LLPLMLKSIGVEAFKGCDFKEITIPEGVTVIGDEAFATCESLEYVSLPDSM-E-TLHNGLFSGCGKLKSIKLPRN-LKII 199 (394)
T ss_dssp CCCTTCCEECTTTTTTCCCSEEECCTTCCEECTTTTTTCTTCCEEECCTTC-C-EECTTTTTTCTTCCBCCCCTT-CCEE
T ss_pred cccCceeeecceeeecccccccccCccccccchhhhcccCCCcEEecCCcc-c-eeccccccCCCCceEEEcCCC-ceEe
Confidence 65543111 000000000 000011111223456666666666665443 3 455666656666666666655 4445
Q ss_pred CCccccCCCCCCEEEccccccCCCCCcCcccccCCCCCcEEEccCccccccCCh-hhhhcccccceeecccCcCcccCcc
Q 041479 212 IPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSLSGTLPN-SLANFSSHLRYLYMSANPISGSIPT 290 (771)
Q Consensus 212 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~~L~~L~Ls~N~l~~~~p~ 290 (771)
...+|.++..|+.+.+..+... + .+.+ ...+.|+.+.+..+. + .+.. .+... .+|+.+.+..+... ....
T Consensus 200 ~~~~F~~~~~L~~i~~~~~~~~-i-~~~~---~~~~~l~~i~ip~~~-~-~i~~~~f~~~-~~l~~~~~~~~~~~-i~~~ 270 (394)
T 4fs7_A 200 RDYCFAECILLENMEFPNSLYY-L-GDFA---LSKTGVKNIIIPDSF-T-ELGKSVFYGC-TDLESISIQNNKLR-IGGS 270 (394)
T ss_dssp CTTTTTTCTTCCBCCCCTTCCE-E-CTTT---TTTCCCCEEEECTTC-C-EECSSTTTTC-SSCCEEEECCTTCE-ECSC
T ss_pred CchhhccccccceeecCCCceE-e-ehhh---cccCCCceEEECCCc-e-eccccccccc-ccceeEEcCCCcce-eecc
Confidence 5556666666666666554332 1 1111 233455555554332 2 2222 22232 35666666555443 4455
Q ss_pred cccccCCcceEecCCccceeccCccccCCCCCCEEEccCCcccccCCcccccccccccccccCccceecCCcccccccce
Q 041479 291 EIGNLKNLIIIAIEKFILIRNIPISVGYLLKLQVLSLFENNISREIPSSLGNFTFLTELNLCGNSIRGSVPSALGSCHQL 370 (771)
Q Consensus 291 ~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l 370 (771)
.|..+..++.+....+.+ ....|..+.+|+.+.+.++ ++.+...+|.++++|+.++|.++ ++.+...+|.+|..|
T Consensus 271 ~F~~~~~l~~~~~~~~~i---~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L 345 (394)
T 4fs7_A 271 LFYNCSGLKKVIYGSVIV---PEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSL 345 (394)
T ss_dssp TTTTCTTCCEEEECSSEE---CTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTC
T ss_pred ccccccccceeccCceee---ccccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCC
Confidence 566666666665554322 2234555666666666543 44444556666666666666433 554555566666665
Q ss_pred -eeecccCcccCCCCcCCCCCCCCCeEECCC
Q 041479 371 -WLDLSHNHLTGPIPLAVGNPKSIPHLDLSK 400 (771)
Q Consensus 371 -~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 400 (771)
.+++..| ++.....+|.++++|+.+++..
T Consensus 346 ~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~ 375 (394)
T 4fs7_A 346 SNINFPLS-LRKIGANAFQGCINLKKVELPK 375 (394)
T ss_dssp CEECCCTT-CCEECTTTBTTCTTCCEEEEEG
T ss_pred CEEEECcc-ccEehHHHhhCCCCCCEEEECC
Confidence 5566544 4444455666666666666543
No 391
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.54 E-value=9.3e-15 Score=140.65 Aligned_cols=90 Identities=16% Similarity=0.269 Sum_probs=39.4
Q ss_pred CCCCCCEEecccCcCcccCChhhhhCCCCCcEEEeecCcccccCCc--cccCCCCCCEEEccccccCCCCCcCcccccCC
Q 041479 169 NITSMEYFHVSENQLVGELPPHIGFTLPNVRILLLAGNQFFGNIPH--SISNASKLEWLDFANNSLTGLIPEDLDSLVNC 246 (771)
Q Consensus 169 ~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l 246 (771)
.+++|++|++++|+++ .+|+.++..+++|++|+|++|+|+. +|. .+..+++|+.|++++|.++...+.....+..+
T Consensus 62 ~l~~L~~L~Ls~N~l~-~~~~~~~~~l~~L~~L~L~~N~i~~-~~~~~~l~~l~~L~~L~l~~N~i~~~~~~~~~~~~~l 139 (176)
T 1a9n_A 62 LLRRLKTLLVNNNRIC-RIGEGLDQALPDLTELILTNNSLVE-LGDLDPLASLKSLTYLCILRNPVTNKKHYRLYVIYKV 139 (176)
T ss_dssp CCSSCCEEECCSSCCC-EECSCHHHHCTTCCEEECCSCCCCC-GGGGGGGGGCTTCCEEECCSSGGGGSTTHHHHHHHHC
T ss_pred cCCCCCEEECCCCccc-ccCcchhhcCCCCCEEECCCCcCCc-chhhHhhhcCCCCCEEEecCCCCCCcHhHHHHHHHHC
Confidence 3444444444444444 3343333344455555555555432 222 44455555555555555543221100012444
Q ss_pred CCCcEEEccCcccc
Q 041479 247 TYLEVVSLSVNSLS 260 (771)
Q Consensus 247 ~~L~~L~Ls~N~l~ 260 (771)
++|+.||++.|.+.
T Consensus 140 ~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 140 PQVRVLDFQKVKLK 153 (176)
T ss_dssp TTCSEETTEECCHH
T ss_pred CccceeCCCcCCHH
Confidence 55555555555543
No 392
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.53 E-value=9.1e-15 Score=140.72 Aligned_cols=111 Identities=21% Similarity=0.211 Sum_probs=66.0
Q ss_pred cccCCCCCCEEecccCcCcccCChhhhhCCCCCcEEEeecCcccccCCccccCCCCCCEEEccccccCCCCCcCcccccC
Q 041479 166 QLLNITSMEYFHVSENQLVGELPPHIGFTLPNVRILLLAGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVN 245 (771)
Q Consensus 166 ~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 245 (771)
.+.++.+|+.|++++|+++ .+|. +....++|++|+|++|+|++. ..|..+++|++|+|++|+|+++.+..| ..
T Consensus 14 ~~~~~~~L~~L~l~~n~l~-~i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~---~~ 86 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIP-VIEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLD---QA 86 (176)
T ss_dssp EEECTTSCEEEECTTSCCC-SCCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHH---HH
T ss_pred hcCCcCCceEEEeeCCCCc-hhHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchh---hc
Confidence 3556667777777777776 5553 332334677777777777654 456666666666666666665544333 44
Q ss_pred CCCCcEEEccCccccccCCh--hhhhcccccceeecccCcCc
Q 041479 246 CTYLEVVSLSVNSLSGTLPN--SLANFSSHLRYLYMSANPIS 285 (771)
Q Consensus 246 l~~L~~L~Ls~N~l~~~~p~--~~~~l~~~L~~L~Ls~N~l~ 285 (771)
+++|++|++++|+|+ .+|. .+..++ +|+.|++++|.++
T Consensus 87 l~~L~~L~L~~N~i~-~~~~~~~l~~l~-~L~~L~l~~N~i~ 126 (176)
T 1a9n_A 87 LPDLTELILTNNSLV-ELGDLDPLASLK-SLTYLCILRNPVT 126 (176)
T ss_dssp CTTCCEEECCSCCCC-CGGGGGGGGGCT-TCCEEECCSSGGG
T ss_pred CCCCCEEECCCCcCC-cchhhHhhhcCC-CCCEEEecCCCCC
Confidence 566666666666664 4444 444443 4666666666555
No 393
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.53 E-value=2.7e-13 Score=148.26 Aligned_cols=311 Identities=13% Similarity=0.024 Sum_probs=212.9
Q ss_pred cccccCCccccCCCCCCEEecccCcCcccCCcccccCCcccccCCccccCCCCCCEEecccccCc-------CCCCccce
Q 041479 79 NFSSNIPHEIGRLFRLRHIIFNSNALQGQIPDSRLILNKLEGNIPSELGSLLKFKGLGLANNYFT-------GPIPHLNM 151 (771)
Q Consensus 79 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~-------~~lp~L~~ 151 (771)
.++.+-..+|.++++|+.+.|..+ ++ ..-..+|.++++|+.+++.++ ++ ...+.|+.
T Consensus 58 ~VtsIg~~AF~~c~~L~~i~lp~~-i~--------------~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~ 121 (394)
T 4fs7_A 58 DVVSIGYAAFQGCRKVTEIKIPST-VR--------------EIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKS 121 (394)
T ss_dssp EEEEECTTTTTTCTTEEEEECCTT-CC--------------EECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCC
T ss_pred eEeEhHHHHhhCCCCceEEEeCCC-cc--------------CcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchh
Confidence 466666788999999999999754 33 244567999999999999765 33 11223333
Q ss_pred eeecccccccccCccccCCCCCCEEecccCcCcccCChhhhhCCCCCcEEEeecCcccccCCccccCCCCCCEEEccccc
Q 041479 152 FQVSVYSLTGSIPIQLLNITSMEYFHVSENQLVGELPPHIGFTLPNVRILLLAGNQFFGNIPHSISNASKLEWLDFANNS 231 (771)
Q Consensus 152 l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 231 (771)
+.+.. ++...-...|.+...+...... .+. .+....|.++++|+.+.+..+. ..+....|.++.+|+.+++..|
T Consensus 122 i~~p~-~l~~i~~~aF~~~~~~~~~~~~--~~~-~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~- 195 (394)
T 4fs7_A 122 ILLPL-MLKSIGVEAFKGCDFKEITIPE--GVT-VIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN- 195 (394)
T ss_dssp CCCCT-TCCEECTTTTTTCCCSEEECCT--TCC-EECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-
T ss_pred hcccC-ceeeecceeeecccccccccCc--ccc-ccchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-
Confidence 33322 2332333445554433332222 222 4555666678888888887654 3466778888888888888776
Q ss_pred cCCCCCcCcccccCCCCCcEEEccCccccccCChhhhhcccccceeecccCcCcccCcccccccCCcceEecCCccceec
Q 041479 232 LTGLIPEDLDSLVNCTYLEVVSLSVNSLSGTLPNSLANFSSHLRYLYMSANPISGSIPTEIGNLKNLIIIAIEKFILIRN 311 (771)
Q Consensus 232 l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~ 311 (771)
++.+...+| .++..|+.+.+..+... +.+.++... +|+.+.+..+ ++......|.++.+|+.+.+..+.. ..
T Consensus 196 ~~~I~~~~F---~~~~~L~~i~~~~~~~~--i~~~~~~~~-~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~-~i 267 (394)
T 4fs7_A 196 LKIIRDYCF---AECILLENMEFPNSLYY--LGDFALSKT-GVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKL-RI 267 (394)
T ss_dssp CCEECTTTT---TTCTTCCBCCCCTTCCE--ECTTTTTTC-CCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTC-EE
T ss_pred ceEeCchhh---ccccccceeecCCCceE--eehhhcccC-CCceEEECCC-ceecccccccccccceeEEcCCCcc-ee
Confidence 554545455 67777887777766543 333333333 6888887644 4435567788899999998877543 45
Q ss_pred cCccccCCCCCCEEEccCCcccccCCcccccccccccccccCccceecCCcccccccce-eeecccCcccCCCCcCCCCC
Q 041479 312 IPISVGYLLKLQVLSLFENNISREIPSSLGNFTFLTELNLCGNSIRGSVPSALGSCHQL-WLDLSHNHLTGPIPLAVGNP 390 (771)
Q Consensus 312 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l-~L~Ls~N~l~~~~p~~~~~l 390 (771)
....|..+..++.+....+.+ ....|..+.+|+.+.+.++ ++.+...+|.++..| .+++.++ ++.+...+|.++
T Consensus 268 ~~~~F~~~~~l~~~~~~~~~i---~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c 342 (394)
T 4fs7_A 268 GGSLFYNCSGLKKVIYGSVIV---PEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGC 342 (394)
T ss_dssp CSCTTTTCTTCCEEEECSSEE---CTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTC
T ss_pred eccccccccccceeccCceee---ccccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCC
Confidence 566788888999888877654 3457888899999999765 776778889999988 8888754 776777899999
Q ss_pred CCCCeEECCCCcccccCCcchhhhhcccccccEEECcCC
Q 041479 391 KSIPHLDLSKNELSGEIPSSLAWIFGYISIFAKLNLSYN 429 (771)
Q Consensus 391 ~~L~~L~Ls~N~l~~~~p~~l~~~~~~l~~L~~L~Ls~N 429 (771)
++|+.+++..| ++..-..+ |.++.+|+.+++..+
T Consensus 343 ~~L~~i~lp~~-l~~I~~~a----F~~C~~L~~i~lp~~ 376 (394)
T 4fs7_A 343 TSLSNINFPLS-LRKIGANA----FQGCINLKKVELPKR 376 (394)
T ss_dssp TTCCEECCCTT-CCEECTTT----BTTCTTCCEEEEEGG
T ss_pred CCCCEEEECcc-ccEehHHH----hhCCCCCCEEEECCC
Confidence 99999999877 66333444 558899999988644
No 394
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.52 E-value=3.8e-16 Score=153.52 Aligned_cols=156 Identities=25% Similarity=0.296 Sum_probs=79.9
Q ss_pred ccCCCCCCEEecccCcCcccCCh------hhhhCCCCCcEEEeecCcccccCCccccCCCCCCEEEccccccCCCCCcCc
Q 041479 167 LLNITSMEYFHVSENQLVGELPP------HIGFTLPNVRILLLAGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDL 240 (771)
Q Consensus 167 ~~~l~~L~~L~Ls~N~l~g~lp~------~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 240 (771)
+.....++.++++.|.++|.+|. .+. .+++|++|+|++|+|++ +| .+..+++|+.|++++|+|+. +|..+
T Consensus 14 ~~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~-~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~~-l~~~~ 89 (198)
T 1ds9_A 14 FEERKSVVATEAEKVELHGMIPPIEKMDATLS-TLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIKK-IENLD 89 (198)
T ss_dssp HHHTTCCCCTTCSEEECCBCCTTCCCCHHHHH-HTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEECS-CSSHH
T ss_pred HHhcccccCcchheeEeccccCcHhhhhHHHh-cCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCccc-ccchh
Confidence 34455666666666666665554 333 55555555555555554 33 55555555555555555553 23222
Q ss_pred ccccCCCCCcEEEccCccccccCChhhhhcccccceeecccCcCcccCcccccccCCcceEecCCccceeccCccccCCC
Q 041479 241 DSLVNCTYLEVVSLSVNSLSGTLPNSLANFSSHLRYLYMSANPISGSIPTEIGNLKNLIIIAIEKFILIRNIPISVGYLL 320 (771)
Q Consensus 241 ~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~ 320 (771)
..+++|++|++++|++++ +| .+..+. +|++|++++|+|++..+ ...+..++
T Consensus 90 ---~~~~~L~~L~L~~N~l~~-l~-~~~~l~-~L~~L~l~~N~i~~~~~-----------------------~~~l~~l~ 140 (198)
T 1ds9_A 90 ---AVADTLEELWISYNQIAS-LS-GIEKLV-NLRVLYMSNNKITNWGE-----------------------IDKLAALD 140 (198)
T ss_dssp ---HHHHHCSEEEEEEEECCC-HH-HHHHHH-HSSEEEESEEECCCHHH-----------------------HHHHTTTT
T ss_pred ---hcCCcCCEEECcCCcCCc-CC-ccccCC-CCCEEECCCCcCCchhH-----------------------HHHHhcCC
Confidence 233445555555555542 33 233332 45555555555442111 12455556
Q ss_pred CCCEEEccCCcccccCCcc----------cccccccccccccCccce
Q 041479 321 KLQVLSLFENNISREIPSS----------LGNFTFLTELNLCGNSIR 357 (771)
Q Consensus 321 ~L~~L~Ls~N~l~~~~p~~----------~~~l~~L~~L~Ls~N~l~ 357 (771)
+|++|++++|.+++..|.. +..+++|+.|| +|.++
T Consensus 141 ~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 141 KLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLPNLKKLD--GMPVD 185 (198)
T ss_dssp TCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHCSSCSEEC--CGGGT
T ss_pred CCCEEEecCCccccccccccchHHHHHHHHHhCCCcEEEC--CcccC
Confidence 6666666666665544432 55666666665 55554
No 395
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.51 E-value=1.6e-14 Score=153.92 Aligned_cols=130 Identities=11% Similarity=0.116 Sum_probs=93.6
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeeccch--------------hhHH--------HHHHHHHHHhccCCCCce--
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLHQR--------------GALK--------SFMAECQALRNIRHRNLV-- 581 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~--------------~~~~--------~~~~E~~~l~~l~H~nIv-- 581 (771)
...+|+|.+|.||+|..+. ++.||||+++.... .... ...+|...|.++.+..+.
T Consensus 100 ~~~IG~Gk~a~VY~a~d~~-G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~vp 178 (397)
T 4gyi_A 100 GSRIGVGKESDIMIVADEK-GKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFPVP 178 (397)
T ss_dssp EEEEEECSSEEEEEEECTT-CCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCSCC
T ss_pred cCEeeeCCceEEEEEECCC-CCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 4568999999999999875 55999999753210 0011 224567777777554432
Q ss_pred eEEEEeecCCCCCceeEEEEEEeccCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCC-
Q 041479 582 KIITACSTSDFQGNYFRALVYEFMHHGSLESCPRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDM- 660 (771)
Q Consensus 582 ~l~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~- 660 (771)
..+++ .. .++||||++|+.+.+... ......++.|++.|+.|||+. +||||||||.|||+++++
T Consensus 179 ~p~~~--~~-------~~LVME~i~G~~L~~l~~---~~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NILl~~dgd 243 (397)
T 4gyi_A 179 EPIAQ--SR-------HTIVMSLVDALPMRQVSS---VPDPASLYADLIALILRLAKH---GLIHGDFNEFNILIREEKD 243 (397)
T ss_dssp CEEEE--ET-------TEEEEECCSCEEGGGCCC---CSCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEEEEEC
T ss_pred eeeec--cC-------ceEEEEecCCccHhhhcc---cHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeCCCC
Confidence 22222 11 279999999988876532 223457889999999999986 899999999999998766
Q ss_pred ---------ceEEecccCcc
Q 041479 661 ---------TAHMGDFGLTR 671 (771)
Q Consensus 661 ---------~~kl~DfGla~ 671 (771)
.+.|+||+=+.
T Consensus 244 ~~d~~~~~~~~~iID~~Q~V 263 (397)
T 4gyi_A 244 AEDPSSITLTPIIIXFPQMV 263 (397)
T ss_dssp SSCTTSEEEEEEECCCTTCE
T ss_pred cccccccccceEEEEeCCcc
Confidence 38999999654
No 396
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.45 E-value=1.8e-13 Score=130.77 Aligned_cols=108 Identities=20% Similarity=0.227 Sum_probs=75.1
Q ss_pred CCEEEccCCcccccCCcccccccccccccccCccceecCCcccccccce-eeecccCcccCCCCcCCCCCCCCCeEECCC
Q 041479 322 LQVLSLFENNISREIPSSLGNFTFLTELNLCGNSIRGSVPSALGSCHQL-WLDLSHNHLTGPIPLAVGNPKSIPHLDLSK 400 (771)
Q Consensus 322 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 400 (771)
.+.+++++|+++ .+|..+. ++|++|+|++|+|++..|..|..++.| +|+|++|+|++..+..|..+++|++|+|++
T Consensus 11 ~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 356667777766 3554442 567777777777776666667777776 677777777766666777777888888888
Q ss_pred CcccccCCcchhhhhcccccccEEECcCCCCCCCCC
Q 041479 401 NELSGEIPSSLAWIFGYISIFAKLNLSYNNLDGDVP 436 (771)
Q Consensus 401 N~l~~~~p~~l~~~~~~l~~L~~L~Ls~N~l~~~~p 436 (771)
|+|++..|..+. .+++|+.|+|++|++++.++
T Consensus 88 N~l~~~~~~~~~----~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 88 NQLKSIPRGAFD----NLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp SCCCCCCTTTTT----TCTTCCEEECCSSCBCTTBG
T ss_pred CccCEeCHHHhc----CCCCCCEEEeCCCCCCCCch
Confidence 888765555443 67778888888888877765
No 397
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.44 E-value=1.9e-13 Score=130.49 Aligned_cols=107 Identities=26% Similarity=0.290 Sum_probs=81.3
Q ss_pred CCCEEecccCcCcccCChhhhhCCCCCcEEEeecCcccccCCccccCCCCCCEEEccccccCCCCCcCcccccCCCCCcE
Q 041479 172 SMEYFHVSENQLVGELPPHIGFTLPNVRILLLAGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEV 251 (771)
Q Consensus 172 ~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~ 251 (771)
+.+.+++++|.++ .+|..++ ++|++|+|++|+|++..|..|.++++|++|+|++|+|+++.+..| .++++|++
T Consensus 10 ~~~~l~~s~n~l~-~ip~~~~---~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f---~~l~~L~~ 82 (170)
T 3g39_A 10 SGTTVDCSGKSLA-SVPTGIP---TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVF---DKLTQLTQ 82 (170)
T ss_dssp ETTEEECTTSCCS-SCCSCCC---TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTT---TTCTTCCE
T ss_pred CCCEEEeCCCCcC-ccCccCC---CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhc---cCCCCCCE
Confidence 3467888888887 7887653 678888888888888778888888888888888888887776655 66778888
Q ss_pred EEccCccccccCChhhhhcccccceeecccCcCcc
Q 041479 252 VSLSVNSLSGTLPNSLANFSSHLRYLYMSANPISG 286 (771)
Q Consensus 252 L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~ 286 (771)
|+|++|+|++..+..+..+. +|++|+|++|.++.
T Consensus 83 L~L~~N~l~~~~~~~~~~l~-~L~~L~L~~N~~~c 116 (170)
T 3g39_A 83 LSLNDNQLKSIPRGAFDNLK-SLTHIWLLNNPWDC 116 (170)
T ss_dssp EECCSSCCCCCCTTTTTTCT-TCCEEECCSSCBCT
T ss_pred EECCCCccCEeCHHHhcCCC-CCCEEEeCCCCCCC
Confidence 88888888744444465654 68888888887763
No 398
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.42 E-value=3.8e-13 Score=128.93 Aligned_cols=105 Identities=23% Similarity=0.282 Sum_probs=80.5
Q ss_pred CCEEecccCcCcccCChhhhhCCCCCcEEEeecCcccccCCccccCCCCCCEEEccccccCCCCCcCcccccCCCCCcEE
Q 041479 173 MEYFHVSENQLVGELPPHIGFTLPNVRILLLAGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEVV 252 (771)
Q Consensus 173 L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L 252 (771)
-+.+++++|+++ .+|..++ ++|++|+|++|+|++..|..|.++++|++|+|++|+|+++++..| .++++|++|
T Consensus 14 ~~~l~~~~n~l~-~iP~~~~---~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~---~~l~~L~~L 86 (174)
T 2r9u_A 14 QTLVNCQNIRLA-SVPAGIP---TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVF---DKLTQLTQL 86 (174)
T ss_dssp SSEEECCSSCCS-SCCSCCC---TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTT---TTCTTCCEE
T ss_pred CcEEEeCCCCCC-ccCCCcC---CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHh---CCcchhhEE
Confidence 367888888887 7887654 678888888888888778888888888888888888887766555 667888888
Q ss_pred EccCccccccCChhhhhcccccceeecccCcCc
Q 041479 253 SLSVNSLSGTLPNSLANFSSHLRYLYMSANPIS 285 (771)
Q Consensus 253 ~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~ 285 (771)
+|++|+|++..+..+..+. +|++|+|++|.+.
T Consensus 87 ~L~~N~l~~l~~~~~~~l~-~L~~L~L~~N~~~ 118 (174)
T 2r9u_A 87 DLNDNHLKSIPRGAFDNLK-SLTHIYLYNNPWD 118 (174)
T ss_dssp ECCSSCCCCCCTTTTTTCT-TCSEEECCSSCBC
T ss_pred ECCCCccceeCHHHhcccc-CCCEEEeCCCCcc
Confidence 8888888843333355554 6888888888877
No 399
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.41 E-value=4.7e-13 Score=128.30 Aligned_cols=107 Identities=19% Similarity=0.212 Sum_probs=63.9
Q ss_pred CEEEccCCcccccCCcccccccccccccccCccceecCCcccccccce-eeecccCcccCCCCcCCCCCCCCCeEECCCC
Q 041479 323 QVLSLFENNISREIPSSLGNFTFLTELNLCGNSIRGSVPSALGSCHQL-WLDLSHNHLTGPIPLAVGNPKSIPHLDLSKN 401 (771)
Q Consensus 323 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 401 (771)
+.+++++|+++ .+|..+. ++|++|+|++|+|++..|..|..++.| +|+|++|+|++..+..|..+++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 45555555554 3444443 556666666666665555556666666 5666666666555555666677777777777
Q ss_pred cccccCCcchhhhhcccccccEEECcCCCCCCCCC
Q 041479 402 ELSGEIPSSLAWIFGYISIFAKLNLSYNNLDGDVP 436 (771)
Q Consensus 402 ~l~~~~p~~l~~~~~~l~~L~~L~Ls~N~l~~~~p 436 (771)
+|++..+..+. .+++|+.|+|++|+|.+.++
T Consensus 92 ~l~~l~~~~~~----~l~~L~~L~L~~N~~~c~~~ 122 (174)
T 2r9u_A 92 HLKSIPRGAFD----NLKSLTHIYLYNNPWDCECR 122 (174)
T ss_dssp CCCCCCTTTTT----TCTTCSEEECCSSCBCTTBG
T ss_pred ccceeCHHHhc----cccCCCEEEeCCCCcccccc
Confidence 77644443333 66667777777777765544
No 400
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.34 E-value=7.3e-11 Score=128.83 Aligned_cols=324 Identities=10% Similarity=0.082 Sum_probs=189.6
Q ss_pred cccCCccccCCC-CCcEEEcCCCcccccCCccccCCCCCCEEecccCcCcccCCcccccCCcccccCCccccCCCCCCEE
Q 041479 57 TGTASPYIGNLT-FLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNALQGQIPDSRLILNKLEGNIPSELGSLLKFKGL 135 (771)
Q Consensus 57 ~~~~~~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~l~~n~l~~~~p~~~~~l~~L~~L 135 (771)
+.+...+|.++. .|+.+.+..+ ++.+-..+|.++++|+.+.++.|.-+ .++..-...|.++.+|+.+
T Consensus 52 t~Ig~~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~-----------~l~~Ig~~aF~~c~~L~~i 119 (394)
T 4gt6_A 52 SKIGDRVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPS-----------CVKKIGRQAFMFCSELTDI 119 (394)
T ss_dssp EEECTTTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCC-----------CCCEECTTTTTTCTTCCBC
T ss_pred eEcCHhhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCC-----------eeeEechhhchhcccceee
Confidence 344555677764 5888888754 66666778888888888888776421 1222334456667777666
Q ss_pred ecccccCcCCCCccceeeecccccccccCccccCCCCCCEEecccCcCcccCChhhhhCCCCCcEEEeecCcccccCCcc
Q 041479 136 GLANNYFTGPIPHLNMFQVSVYSLTGSIPIQLLNITSMEYFHVSENQLVGELPPHIGFTLPNVRILLLAGNQFFGNIPHS 215 (771)
Q Consensus 136 ~Ls~N~l~~~lp~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~ 215 (771)
.+.++ ++ ..-...|.++.+|+.+.+..+ +. .++...|....+|+.+.+..+ ++.+...+
T Consensus 120 ~~~~~-~~-----------------~I~~~aF~~c~~L~~i~lp~~-~~-~I~~~~F~~c~~L~~i~~~~~-~~~I~~~a 178 (394)
T 4gt6_A 120 PILDS-VT-----------------EIDSEAFHHCEELDTVTIPEG-VT-SVADGMFSYCYSLHTVTLPDS-VTAIEERA 178 (394)
T ss_dssp GGGTT-CS-----------------EECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCEEECCTT-CCEECTTT
T ss_pred ccCCc-cc-----------------eehhhhhhhhcccccccccce-ee-eecccceecccccccccccce-eeEecccc
Confidence 55443 11 123345666677777777543 33 466666666677777777654 44355555
Q ss_pred ccCCCCCCEEEccccccCCCCCcCcccccCCCCCcEEEccCccccccCChhhhhcc-------------cccceeecccC
Q 041479 216 ISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSLSGTLPNSLANFS-------------SHLRYLYMSAN 282 (771)
Q Consensus 216 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-------------~~L~~L~Ls~N 282 (771)
|.+ .+|+.+.+..+-.. +...+| .++.++.......+... .+...+.... ..+..+.+. +
T Consensus 179 F~~-~~l~~i~ip~~~~~-i~~~af---~~c~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip-~ 251 (394)
T 4gt6_A 179 FTG-TALTQIHIPAKVTR-IGTNAF---SECFALSTITSDSESYP-AIDNVLYEKSANGDYALIRYPSQREDPAFKIP-N 251 (394)
T ss_dssp TTT-CCCSEEEECTTCCE-ECTTTT---TTCTTCCEEEECCSSSC-BSSSCEEEECTTSCEEEEECCTTCCCSEEECC-T
T ss_pred ccc-cceeEEEECCcccc-cccchh---hhccccceecccccccc-cccceeecccccccccccccccccccceEEcC-C
Confidence 654 56777766554322 223333 55666666655544433 2221111100 012233332 2
Q ss_pred cCcccCcccccccCCcceEecCCccceeccCccccCCCCCCEEEccCCcccccCCcccccccccccccccCccceecCCc
Q 041479 283 PISGSIPTEIGNLKNLIIIAIEKFILIRNIPISVGYLLKLQVLSLFENNISREIPSSLGNFTFLTELNLCGNSIRGSVPS 362 (771)
Q Consensus 283 ~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 362 (771)
.++..-..+|.++.+|+.+.+.++. ...-..+|.++.+|+.+.+. +.++.....+|.++++|+.++|..+ ++.+...
T Consensus 252 ~v~~i~~~aF~~c~~L~~i~lp~~~-~~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~ 328 (394)
T 4gt6_A 252 GVARIETHAFDSCAYLASVKMPDSV-VSIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDD 328 (394)
T ss_dssp TEEEECTTTTTTCSSCCEEECCTTC-CEECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTT
T ss_pred cceEcccceeeecccccEEeccccc-ceecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHh
Confidence 3333445678888888888886543 34445677788888888885 4566566668888888888888754 6656677
Q ss_pred ccccccce-eeecccCcccCCCCcCCCCCCCCCeEECCCCcccccCCcchhhhhcccccccEEECcCCCC
Q 041479 363 ALGSCHQL-WLDLSHNHLTGPIPLAVGNPKSIPHLDLSKNELSGEIPSSLAWIFGYISIFAKLNLSYNNL 431 (771)
Q Consensus 363 ~~~~l~~l-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~l~~L~~L~Ls~N~l 431 (771)
+|.+|..| .+.+..+ ++.+...+|.++++|+.+++.+|.... . .|.....|+.+.+..|.+
T Consensus 329 aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~---~----~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 329 AFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQW---N----AISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp TTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH---H----TCBCCCCC----------
T ss_pred HhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceeeh---h----hhhccCCCCEEEeCCCCE
Confidence 88888877 7777644 665666788888888888888776541 1 233566777777766654
No 401
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.33 E-value=7.8e-11 Score=128.60 Aligned_cols=313 Identities=10% Similarity=0.047 Sum_probs=216.8
Q ss_pred cEEEEEcCCCCCcccCCccccCCCCCcEEEcCCCc---ccccCCccccCCCCCCEEecccCcCcccCCcccccCCccccc
Q 041479 45 RVILLNLSGQNLTGTASPYIGNLTFLRLINLQQNN---FSSNIPHEIGRLFRLRHIIFNSNALQGQIPDSRLILNKLEGN 121 (771)
Q Consensus 45 ~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~---l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~l~~n~l~~~ 121 (771)
.++.+.+.. .++.+...+|.++++|+.+.++.|. ++.+-..+|.++.+|+.+.+..+-- ..
T Consensus 65 ~L~sI~iP~-svt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~~~---------------~I 128 (394)
T 4gt6_A 65 VLTSVQIPD-TVTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDSVT---------------EI 128 (394)
T ss_dssp CCCEEEECT-TCCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTTCS---------------EE
T ss_pred cCEEEEECC-CeeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCccc---------------ee
Confidence 477788875 4777888899999999999999875 7766678899999999888766532 24
Q ss_pred CCccccCCCCCCEEecccccCcCCCCccceeeecccccccccCccccCCCCCCEEecccCcCcccCChhhhhCCCCCcEE
Q 041479 122 IPSELGSLLKFKGLGLANNYFTGPIPHLNMFQVSVYSLTGSIPIQLLNITSMEYFHVSENQLVGELPPHIGFTLPNVRIL 201 (771)
Q Consensus 122 ~p~~~~~l~~L~~L~Ls~N~l~~~lp~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L 201 (771)
-...|.++.+|+.+.+..+.-. .....|.++.+|+.+.+..+ ++ .+....| .-.+|+.+
T Consensus 129 ~~~aF~~c~~L~~i~lp~~~~~------------------I~~~~F~~c~~L~~i~~~~~-~~-~I~~~aF-~~~~l~~i 187 (394)
T 4gt6_A 129 DSEAFHHCEELDTVTIPEGVTS------------------VADGMFSYCYSLHTVTLPDS-VT-AIEERAF-TGTALTQI 187 (394)
T ss_dssp CTTTTTTCTTCCEEECCTTCCE------------------ECTTTTTTCTTCCEEECCTT-CC-EECTTTT-TTCCCSEE
T ss_pred hhhhhhhhcccccccccceeee------------------ecccceecccccccccccce-ee-Eeccccc-cccceeEE
Confidence 4567888999999998654322 33456788899999998765 55 6777777 45789999
Q ss_pred EeecCcccccCCccccCCCCCCEEEccccccCCCCCcCcc----------cccCCCCCcEEEccCccccccCChhhhhcc
Q 041479 202 LLAGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDLD----------SLVNCTYLEVVSLSVNSLSGTLPNSLANFS 271 (771)
Q Consensus 202 ~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~----------~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 271 (771)
.+..+-.. +...+|.++.+|+......+.........+. .+.....+..+.+.. .++..-...|...
T Consensus 188 ~ip~~~~~-i~~~af~~c~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip~-~v~~i~~~aF~~c- 264 (394)
T 4gt6_A 188 HIPAKVTR-IGTNAFSECFALSTITSDSESYPAIDNVLYEKSANGDYALIRYPSQREDPAFKIPN-GVARIETHAFDSC- 264 (394)
T ss_dssp EECTTCCE-ECTTTTTTCTTCCEEEECCSSSCBSSSCEEEECTTSCEEEEECCTTCCCSEEECCT-TEEEECTTTTTTC-
T ss_pred EECCcccc-cccchhhhccccceecccccccccccceeecccccccccccccccccccceEEcCC-cceEcccceeeec-
Confidence 99876554 6778899999999888776655422111110 011222333444332 2331223334444
Q ss_pred cccceeecccCcCcccCcccccccCCcceEecCCccceeccCccccCCCCCCEEEccCCcccccCCcccccccccccccc
Q 041479 272 SHLRYLYMSANPISGSIPTEIGNLKNLIIIAIEKFILIRNIPISVGYLLKLQVLSLFENNISREIPSSLGNFTFLTELNL 351 (771)
Q Consensus 272 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 351 (771)
.+|+.+.+.++..+ +....|.++++|+.+.+.. .+......+|.++.+|+.+++..+ ++.+...+|.++++|+.+.+
T Consensus 265 ~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~~-~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~i 341 (394)
T 4gt6_A 265 AYLASVKMPDSVVS-IGTGAFMNCPALQDIEFSS-RITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAI 341 (394)
T ss_dssp SSCCEEECCTTCCE-ECTTTTTTCTTCCEEECCT-TCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEE
T ss_pred ccccEEecccccce-ecCcccccccccccccCCC-cccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEE
Confidence 37889988766554 6677899999999999864 555556678889999999999865 66666779999999999999
Q ss_pred cCccceecCCcccccccce-eeecccCcccCCCCcCCCCCCCCCeEECCCCccc
Q 041479 352 CGNSIRGSVPSALGSCHQL-WLDLSHNHLTGPIPLAVGNPKSIPHLDLSKNELS 404 (771)
Q Consensus 352 s~N~l~~~~p~~~~~l~~l-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 404 (771)
..+ ++.+...+|.+|..| .+++.+|.... ..|....+|+.+.+..|.+.
T Consensus 342 p~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~---~~~~~~~~L~~i~i~~~~~~ 391 (394)
T 4gt6_A 342 PSS-VTKIPESAFSNCTALNNIEYSGSRSQW---NAISTDSGLQNLPVAPGSID 391 (394)
T ss_dssp CTT-CCBCCGGGGTTCTTCCEEEESSCHHHH---HTCBCCCCC-----------
T ss_pred Ccc-cCEEhHhHhhCCCCCCEEEECCceeeh---hhhhccCCCCEEEeCCCCEE
Confidence 655 776777899999999 89998886542 46778889999988777653
No 402
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.30 E-value=4.9e-12 Score=135.66 Aligned_cols=107 Identities=14% Similarity=0.189 Sum_probs=85.1
Q ss_pred ccceeeeecCCCCcEEEEEcCCC-CCcccCCccccCCCCCcEEEcCC-CcccccCCccccCCCCCCEEecccCcCcccCC
Q 041479 32 CQWLGVTCSLKYQRVILLNLSGQ-NLTGTASPYIGNLTFLRLINLQQ-NNFSSNIPHEIGRLFRLRHIIFNSNALQGQIP 109 (771)
Q Consensus 32 c~w~~v~c~~~~~~l~~L~Ls~n-~l~~~~~~~~~~l~~L~~L~Ls~-N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 109 (771)
|.|..|.|+ ++ +|++ +|+ |..+++|+.|+|++ |+|++..|..|+++++|++|+|++|+|+
T Consensus 8 C~~~~v~~~------------~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~---- 69 (347)
T 2ifg_A 8 HGSSGLRCT------------RDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLR---- 69 (347)
T ss_dssp SSSSCEECC------------SSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCC----
T ss_pred ccCCEEEcC------------CCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccc----
Confidence 777776665 34 7874 566 99999999999996 9999888889999999999999999965
Q ss_pred cccccCCcccccCCccccCCCCCCEEecccccCcCCCCccceeeecccccccccCc-cccCCCCCCEEecccCcCcc
Q 041479 110 DSRLILNKLEGNIPSELGSLLKFKGLGLANNYFTGPIPHLNMFQVSVYSLTGSIPI-QLLNITSMEYFHVSENQLVG 185 (771)
Q Consensus 110 ~~~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~L~~l~l~~n~l~~~~p~-~~~~l~~L~~L~Ls~N~l~g 185 (771)
+..|..|.+|++|+.|+|++|+|++ +|. .|..++ |+.|+|++|.+..
T Consensus 70 ----------~~~~~~~~~l~~L~~L~l~~N~l~~------------------~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 70 ----------FVAPDAFHFTPRLSRLNLSFNALES------------------LSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp ----------EECTTGGGSCSCCCEEECCSSCCSC------------------CCSTTTCSCC-CCEEECCSSCCCC
T ss_pred ----------eeCHHHhcCCcCCCEEeCCCCccce------------------eCHHHcccCC-ceEEEeeCCCccC
Confidence 4667788889999999999888873 333 334444 8888888888873
No 403
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.23 E-value=1.8e-13 Score=147.85 Aligned_cols=97 Identities=21% Similarity=0.112 Sum_probs=44.1
Q ss_pred ccCCCCCCEEEccCCccccc----CCcccccccccccccccCccceecCCcccccccceeeecccCcccCCCCcCCCCCC
Q 041479 316 VGYLLKLQVLSLFENNISRE----IPSSLGNFTFLTELNLCGNSIRGSVPSALGSCHQLWLDLSHNHLTGPIPLAVGNPK 391 (771)
Q Consensus 316 ~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~L~Ls~N~l~~~~p~~~~~l~ 391 (771)
+...++|++|+|++|+|+.. ++..+...++|++|+|++|.|++.... .++..+...+
T Consensus 179 L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~-------------------~l~~~L~~~~ 239 (372)
T 3un9_A 179 LAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAAL-------------------ALARAAREHP 239 (372)
T ss_dssp HHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHH-------------------HHHHHHHHCS
T ss_pred HhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHH-------------------HHHHHHHhCC
Confidence 34455566666666655432 123344445555555555555421111 1122233456
Q ss_pred CCCeEECCCCcccccCCcchhhhhcccc--cccEEE--CcCCCCC
Q 041479 392 SIPHLDLSKNELSGEIPSSLAWIFGYIS--IFAKLN--LSYNNLD 432 (771)
Q Consensus 392 ~L~~L~Ls~N~l~~~~p~~l~~~~~~l~--~L~~L~--Ls~N~l~ 432 (771)
+|++|+|++|.|+..-...+.... ... .|+.+. +..|.++
T Consensus 240 ~L~~L~Ls~N~i~~~g~~~L~~~~-~~~~~~L~~l~~ll~~~~~~ 283 (372)
T 3un9_A 240 SLELLHLYFNELSSEGRQVLRDLG-GAAEGGARVVVSLTEGTAVS 283 (372)
T ss_dssp SCCEEECTTSSCCHHHHHHHHHCC-------CEEECCCC----CH
T ss_pred CCCEEeccCCCCCHHHHHHHHHHh-cCCCccchhhHhhhcCCccC
Confidence 778888888887754333333211 111 155665 5555553
No 404
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.22 E-value=3.1e-11 Score=129.37 Aligned_cols=93 Identities=19% Similarity=0.170 Sum_probs=72.3
Q ss_pred ccCccccCCCCCCEEeccc-CcCcccCChhhhhCCCCCcEEEeecCcccccCCccccCCCCCCEEEccccccCCCCCcCc
Q 041479 162 SIPIQLLNITSMEYFHVSE-NQLVGELPPHIGFTLPNVRILLLAGNQFFGNIPHSISNASKLEWLDFANNSLTGLIPEDL 240 (771)
Q Consensus 162 ~~p~~~~~l~~L~~L~Ls~-N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 240 (771)
.+|. +..+++|+.|+|++ |+|+ .+|+..+..+++|+.|+|++|+|+++.|..|.++++|+.|+|++|+|+++++..|
T Consensus 23 ~ip~-l~~~~~L~~L~l~~~n~l~-~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~ 100 (347)
T 2ifg_A 23 SLHH-LPGAENLTELYIENQQHLQ-HLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTV 100 (347)
T ss_dssp TTTT-SCSCSCCSEEECCSCSSCC-EECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCSSCCSCCCSTTT
T ss_pred ccCC-CCCCCCeeEEEccCCCCCC-CcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCCCccceeCHHHc
Confidence 4666 77888888888885 8887 5665555588888888888888888888888888888888888888887766655
Q ss_pred ccccCCCCCcEEEccCcccc
Q 041479 241 DSLVNCTYLEVVSLSVNSLS 260 (771)
Q Consensus 241 ~~l~~l~~L~~L~Ls~N~l~ 260 (771)
..++ |+.|+|++|.+.
T Consensus 101 ---~~~~-L~~l~l~~N~~~ 116 (347)
T 2ifg_A 101 ---QGLS-LQELVLSGNPLH 116 (347)
T ss_dssp ---CSCC-CCEEECCSSCCC
T ss_pred ---ccCC-ceEEEeeCCCcc
Confidence 3334 888888888876
No 405
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.20 E-value=4.2e-13 Score=144.89 Aligned_cols=169 Identities=12% Similarity=0.089 Sum_probs=101.6
Q ss_pred CCCCcEEEccCccccccCChhhhhc----ccccceeecccCcCcccCcccc-cccCCcceEecCCccceeccCccc----
Q 041479 246 CTYLEVVSLSVNSLSGTLPNSLANF----SSHLRYLYMSANPISGSIPTEI-GNLKNLIIIAIEKFILIRNIPISV---- 316 (771)
Q Consensus 246 l~~L~~L~Ls~N~l~~~~p~~~~~l----~~~L~~L~Ls~N~l~~~~p~~~-~~l~~L~~L~l~~n~l~~~~p~~~---- 316 (771)
+++|+.|+|++|.|+......+... .++|++|+|++|.|+......+ ..+++|+.|+|++|.+.......+
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 3567888888888874433333332 1368888888888764332222 235566666666666643332222
Q ss_pred -cCCCCCCEEEccCCccccc----CCcccccccccccccccCccceecCCcccccccceeeecccCcccCCCCcCCCCCC
Q 041479 317 -GYLLKLQVLSLFENNISRE----IPSSLGNFTFLTELNLCGNSIRGSVPSALGSCHQLWLDLSHNHLTGPIPLAVGNPK 391 (771)
Q Consensus 317 -~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~L~Ls~N~l~~~~p~~~~~l~ 391 (771)
...++|++|+|++|.|+.. ++..+..+++|++|+|++|.|++.... .++..+..++
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~-------------------~L~~~L~~~~ 211 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLE-------------------LLAAQLDRNR 211 (372)
T ss_dssp HSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHH-------------------HHHHHGGGCS
T ss_pred HhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHH-------------------HHHHHHhcCC
Confidence 1345566666666666431 222334455556666555555421100 1234455677
Q ss_pred CCCeEECCCCcccccCCcchhhhhcccccccEEECcCCCCCC
Q 041479 392 SIPHLDLSKNELSGEIPSSLAWIFGYISIFAKLNLSYNNLDG 433 (771)
Q Consensus 392 ~L~~L~Ls~N~l~~~~p~~l~~~~~~l~~L~~L~Ls~N~l~~ 433 (771)
+|++|+|++|.|+..-...+...+...++|++|||++|+|+.
T Consensus 212 ~L~~L~Ls~N~i~~~g~~~l~~~L~~~~~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 212 QLQELNVAYNGAGDTAALALARAAREHPSLELLHLYFNELSS 253 (372)
T ss_dssp CCCEEECCSSCCCHHHHHHHHHHHHHCSSCCEEECTTSSCCH
T ss_pred CcCeEECCCCCCCHHHHHHHHHHHHhCCCCCEEeccCCCCCH
Confidence 899999999999864444454445567899999999999874
No 406
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.04 E-value=3.7e-10 Score=115.79 Aligned_cols=134 Identities=15% Similarity=0.096 Sum_probs=101.0
Q ss_pred ccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccC-CCCceeEEEEeecCCCCCceeEEEEEEeccC
Q 041479 529 YESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIR-HRNLVKIITACSTSDFQGNYFRALVYEFMHH 607 (771)
Q Consensus 529 l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~~~~~~lv~e~~~~ 607 (771)
.+.+..+.||+.... ++.|++|+..........++.+|+++++.+. |..+.++++++...+ ..|+||||++|
T Consensus 22 ~~g~s~~~v~~~~~~--~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~-----~~~lv~e~i~G 94 (263)
T 3tm0_A 22 TEGMSPAKVYKLVGE--NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDG-----WSNLLMSEADG 94 (263)
T ss_dssp CSCCSSSEEEEEECS--SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETT-----EEEEEEECCSS
T ss_pred ccCCCCCeEEEEECC--CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCC-----ceEEEEEecCC
Confidence 455666889998754 3589999986533233356889999999985 677888999887665 67999999999
Q ss_pred CCCCCCcccCCHHHHHHHHHHHHHHHHHHHhcC-----------------------------------------------
Q 041479 608 GSLESCPRILSFLRRLNIAIDVASALEYLHHHC----------------------------------------------- 640 (771)
Q Consensus 608 g~L~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~----------------------------------------------- 640 (771)
.++.+... +......++.++++++..||+..
T Consensus 95 ~~l~~~~~--~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 172 (263)
T 3tm0_A 95 VLCSEEYE--DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRELYD 172 (263)
T ss_dssp EEHHHHCC--TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSHHHHHH
T ss_pred eehhhccC--CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCHHHHHH
Confidence 88865311 12234578889999999999810
Q ss_pred ---------CCCeEecCCCCCCeeeCCCCceEEecccCcc
Q 041479 641 ---------KKPIVHCDLKPSNVLLDNDMTAHMGDFGLTR 671 (771)
Q Consensus 641 ---------~~~ivHrdlk~~NILl~~~~~~kl~DfGla~ 671 (771)
...++|+|++|.||++++...+.|+||+.+.
T Consensus 173 ~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~ 212 (263)
T 3tm0_A 173 FLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSG 212 (263)
T ss_dssp HHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCE
T ss_pred HHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhcc
Confidence 1358999999999999876566799999764
No 407
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.00 E-value=3.8e-08 Score=106.55 Aligned_cols=294 Identities=12% Similarity=0.107 Sum_probs=149.5
Q ss_pred ccccCCCCCcEEEcCCCcccccCCccccCCCCCCEEecccCcCcccCCcccccCCcccccCCccccCCCCCCEEeccccc
Q 041479 62 PYIGNLTFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNALQGQIPDSRLILNKLEGNIPSELGSLLKFKGLGLANNY 141 (771)
Q Consensus 62 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~ 141 (771)
+++....+|+.+.+.. .++.+-..+|.++++|+.++|..+ ++ ..-...|.+. +|+.+.+..+
T Consensus 40 ~~~~~~~~i~~v~ip~-~vt~Ig~~aF~~C~~L~~I~lp~~-v~--------------~Ig~~aF~~c-~l~~i~~~~~- 101 (379)
T 4h09_A 40 PWYKDRDRISEVRVNS-GITSIGEANFNSCYNMTKVTVAST-VT--------------SIGDGAFADT-KLQSYTGMER- 101 (379)
T ss_dssp TTGGGGGGCSEEEECT-TEEEECTTTTTTCTTCCEEEECTT-CC--------------EECTTTTTTC-CCCEEEECTT-
T ss_pred cccccccCCEEEEeCC-CccChHHHHhhCCCCCCEEEeCCc-ce--------------EechhhhcCC-CCceEECCce-
Confidence 3455555666666653 355445556666666666666543 22 1222334443 4444444322
Q ss_pred CcCCCCccceeeecccccccccCccccCCCCCCEEecccCcCcccCChhhhhCCCCCcEEEeecCcccccCCccccCCCC
Q 041479 142 FTGPIPHLNMFQVSVYSLTGSIPIQLLNITSMEYFHVSENQLVGELPPHIGFTLPNVRILLLAGNQFFGNIPHSISNASK 221 (771)
Q Consensus 142 l~~~lp~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 221 (771)
++ ..-...|.+ .+|+.+.+..+ ++ .+....|.+ .+|+.+.+..+ ++.+....|.+..+
T Consensus 102 l~-----------------~I~~~aF~~-~~L~~i~lp~~-~~-~i~~~~F~~-~~l~~~~~~~~-v~~i~~~~f~~~~~ 159 (379)
T 4h09_A 102 VK-----------------KFGDYVFQG-TDLDDFEFPGA-TT-EIGNYIFYN-SSVKRIVIPKS-VTTIKDGIGYKAEN 159 (379)
T ss_dssp CC-----------------EECTTTTTT-CCCSEEECCTT-CC-EECTTTTTT-CCCCEEEECTT-CCEECSCTTTTCTT
T ss_pred ee-----------------Eeccceecc-CCcccccCCCc-cc-ccccccccc-ceeeeeeccce-eeccccchhccccc
Confidence 11 011122332 35666666544 23 445555533 35555555443 44455666777777
Q ss_pred CCEEEccccccCCCCCcC---------cccccCCCCCcEEEccCccccccCChhhhhcccccceeecccCcCcccCcccc
Q 041479 222 LEWLDFANNSLTGLIPED---------LDSLVNCTYLEVVSLSVNSLSGTLPNSLANFSSHLRYLYMSANPISGSIPTEI 292 (771)
Q Consensus 222 L~~L~Ls~N~l~~~~p~~---------~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~l~~~~p~~~ 292 (771)
++...+..+......... ...+..+..+..+.+..+.-. .....+... .+|+.+.+..+ +.......|
T Consensus 160 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~f~~~-~~l~~i~~~~~-~~~i~~~~f 236 (379)
T 4h09_A 160 LEKIEVSSNNKNYVAENYVLYNKNKTILESYPAAKTGTEFTIPSTVKT-VTAYGFSYG-KNLKKITITSG-VTTLGDGAF 236 (379)
T ss_dssp CCEEEECTTCSSEEEETTEEEETTSSEEEECCTTCCCSEEECCTTCCE-ECTTTTTTC-SSCSEEECCTT-CCEECTTTT
T ss_pred ccccccccccceeecccceecccccceeccccccccccccccccceeE-Eeecccccc-cccceeeeccc-eeEEccccc
Confidence 777766654432111000 011123334444443333221 222222222 25666666543 333445566
Q ss_pred cccCCcceEecCCccceeccCccccCCCCCCEEEccCCcccccCCcccccccccccccccCccceecCCcccccccce-e
Q 041479 293 GNLKNLIIIAIEKFILIRNIPISVGYLLKLQVLSLFENNISREIPSSLGNFTFLTELNLCGNSIRGSVPSALGSCHQL-W 371 (771)
Q Consensus 293 ~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l-~ 371 (771)
.++.+|+.+.+..+ +...-..+|..+.+|+.+.+..+ ++......|.++++|+.+.+.++.++.+...+|.+|..| .
T Consensus 237 ~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~ 314 (379)
T 4h09_A 237 YGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSS 314 (379)
T ss_dssp TTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCE
T ss_pred cCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCE
Confidence 66666666666553 33444455666666666666543 443445566666677777766666665556666666666 5
Q ss_pred eecccCcccCCCCcCCCCCCCCCeEECCCC
Q 041479 372 LDLSHNHLTGPIPLAVGNPKSIPHLDLSKN 401 (771)
Q Consensus 372 L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 401 (771)
++|..+ ++.+...+|.++++|+.+.+..+
T Consensus 315 i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~ 343 (379)
T 4h09_A 315 VTLPTA-LKTIQVYAFKNCKALSTISYPKS 343 (379)
T ss_dssp EECCTT-CCEECTTTTTTCTTCCCCCCCTT
T ss_pred EEcCcc-ccEEHHHHhhCCCCCCEEEECCc
Confidence 666543 55455556666666666666443
No 408
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=99.00 E-value=3.2e-08 Score=107.12 Aligned_cols=298 Identities=9% Similarity=0.051 Sum_probs=163.4
Q ss_pred CcEEEEEcCCCCCcccCCccccCCCCCcEEEcCCCcccccCCccccCCCCCCEEecccCcCcccCCcccccCCcccccCC
Q 041479 44 QRVILLNLSGQNLTGTASPYIGNLTFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNALQGQIPDSRLILNKLEGNIP 123 (771)
Q Consensus 44 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~l~~n~l~~~~p 123 (771)
.+++.+.+. ..++.+...+|.++++|+.++|..+ ++.+-..+|.+. +|+.+.+..+- + ..-.
T Consensus 46 ~~i~~v~ip-~~vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~l-~--------------~I~~ 107 (379)
T 4h09_A 46 DRISEVRVN-SGITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMERV-K--------------KFGD 107 (379)
T ss_dssp GGCSEEEEC-TTEEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTTC-C--------------EECT
T ss_pred cCCEEEEeC-CCccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCcee-e--------------Eecc
Confidence 356666665 4577777889999999999999755 776777889887 68888776542 2 1223
Q ss_pred ccccCCCCCCEEecccccCcCCCCccceeeecccccccccCccccCCCCCCEEecccCcCcccCChhhhhCCCCCcEEEe
Q 041479 124 SELGSLLKFKGLGLANNYFTGPIPHLNMFQVSVYSLTGSIPIQLLNITSMEYFHVSENQLVGELPPHIGFTLPNVRILLL 203 (771)
Q Consensus 124 ~~~~~l~~L~~L~Ls~N~l~~~lp~L~~l~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L 203 (771)
..|.. .+|+.+.+..+-.. .-...|.+ .+|+...+..+ ++ .+....|....+++.+.+
T Consensus 108 ~aF~~-~~L~~i~lp~~~~~------------------i~~~~F~~-~~l~~~~~~~~-v~-~i~~~~f~~~~~l~~~~~ 165 (379)
T 4h09_A 108 YVFQG-TDLDDFEFPGATTE------------------IGNYIFYN-SSVKRIVIPKS-VT-TIKDGIGYKAENLEKIEV 165 (379)
T ss_dssp TTTTT-CCCSEEECCTTCCE------------------ECTTTTTT-CCCCEEEECTT-CC-EECSCTTTTCTTCCEEEE
T ss_pred ceecc-CCcccccCCCcccc------------------cccccccc-ceeeeeeccce-ee-ccccchhccccccccccc
Confidence 34544 47888887654221 00111111 12333332221 22 233333334444444443
Q ss_pred ecCcccc------------cCCccccCCCCCCEEEccccccCCCCCcCcccccCCCCCcEEEccCccccccCChhhhhcc
Q 041479 204 AGNQFFG------------NIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNSLSGTLPNSLANFS 271 (771)
Q Consensus 204 ~~N~l~~------------~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 271 (771)
..+.... .....+.....+..+.+..+.- ......+ ..+.+|+.+.+..+ +.......+....
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~~f---~~~~~l~~i~~~~~-~~~i~~~~f~~~~ 240 (379)
T 4h09_A 166 SSNNKNYVAENYVLYNKNKTILESYPAAKTGTEFTIPSTVK-TVTAYGF---SYGKNLKKITITSG-VTTLGDGAFYGMK 240 (379)
T ss_dssp CTTCSSEEEETTEEEETTSSEEEECCTTCCCSEEECCTTCC-EECTTTT---TTCSSCSEEECCTT-CCEECTTTTTTCS
T ss_pred ccccceeecccceecccccceecccccccccccccccccee-EEeeccc---ccccccceeeeccc-eeEEccccccCCc
Confidence 3322110 1112333444444444433321 1222222 45566666666544 2212223333333
Q ss_pred cccceeecccCcCcccCcccccccCCcceEecCCccceeccCccccCCCCCCEEEccCCcccccCCcccccccccccccc
Q 041479 272 SHLRYLYMSANPISGSIPTEIGNLKNLIIIAIEKFILIRNIPISVGYLLKLQVLSLFENNISREIPSSLGNFTFLTELNL 351 (771)
Q Consensus 272 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 351 (771)
+|+.+.+..+ ++.+....|.++.+|+.+.+..+ +.......|..+.+|+.+.+.++.++.+...+|.++++|+.+.|
T Consensus 241 -~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~l 317 (379)
T 4h09_A 241 -ALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTL 317 (379)
T ss_dssp -SCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEEC
T ss_pred -cceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEc
Confidence 5666666654 44455566777777777776543 33444456667777777777777776556667777777777777
Q ss_pred cCccceecCCcccccccce-eeecccCcccCCCCcCCCCCC
Q 041479 352 CGNSIRGSVPSALGSCHQL-WLDLSHNHLTGPIPLAVGNPK 391 (771)
Q Consensus 352 s~N~l~~~~p~~~~~l~~l-~L~Ls~N~l~~~~p~~~~~l~ 391 (771)
..+ ++.+...+|.+|..| .+.+..+ ++.+...+|.++.
T Consensus 318 p~~-l~~I~~~aF~~C~~L~~i~ip~~-v~~I~~~aF~~c~ 356 (379)
T 4h09_A 318 PTA-LKTIQVYAFKNCKALSTISYPKS-ITLIESGAFEGSS 356 (379)
T ss_dssp CTT-CCEECTTTTTTCTTCCCCCCCTT-CCEECTTTTTTSS
T ss_pred Ccc-ccEEHHHHhhCCCCCCEEEECCc-cCEEchhHhhCCC
Confidence 544 555666677777777 6666544 5545556666553
No 409
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=98.95 E-value=1e-09 Score=112.20 Aligned_cols=127 Identities=17% Similarity=0.122 Sum_probs=93.7
Q ss_pred ccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCC--ceeEEEEeecCCCCCceeEEEEEEeccCC
Q 041479 531 SLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRN--LVKIITACSTSDFQGNYFRALVYEFMHHG 608 (771)
Q Consensus 531 ~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~n--Iv~l~~~~~~~~~~~~~~~~lv~e~~~~g 608 (771)
.|..+.||+....+ ++.|+||+.... ....+.+|+++++.+++.+ +.+++++....+ ..++||||++|.
T Consensus 30 gg~~~~v~~~~~~~-g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~-----~~~~v~e~i~G~ 100 (264)
T 1nd4_A 30 GCSDAAVFRLSAQG-RPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAG-----RDWLLLGEVPGQ 100 (264)
T ss_dssp TTSSCEEEEEECTT-SCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSS-----CEEEEEECCSSE
T ss_pred CCCCceEEEEecCC-CCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCC-----CCEEEEEecCCc
Confidence 45568899997643 447999997543 2256788999999986544 455888776554 579999999998
Q ss_pred CCCCCcccCCHHHHHHHHHHHHHHHHHHHhcC------------------------------------------------
Q 041479 609 SLESCPRILSFLRRLNIAIDVASALEYLHHHC------------------------------------------------ 640 (771)
Q Consensus 609 ~L~~~~~~l~~~~~~~i~~~ia~gL~~LH~~~------------------------------------------------ 640 (771)
++. . ...+ ...++.+++..+..||+..
T Consensus 101 ~l~-~-~~~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 175 (264)
T 1nd4_A 101 DLL-S-SHLA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLK 175 (264)
T ss_dssp ETT-T-SCCC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHH
T ss_pred ccC-c-CcCC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHHHH
Confidence 884 2 2222 3467788889999999742
Q ss_pred -------CCCeEecCCCCCCeeeCCCCceEEecccCcc
Q 041479 641 -------KKPIVHCDLKPSNVLLDNDMTAHMGDFGLTR 671 (771)
Q Consensus 641 -------~~~ivHrdlk~~NILl~~~~~~kl~DfGla~ 671 (771)
...++|+|++|.||+++.++.++|+|||.+.
T Consensus 176 ~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~ 213 (264)
T 1nd4_A 176 ARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLG 213 (264)
T ss_dssp HTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred HhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcc
Confidence 1129999999999999877667799999875
No 410
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=98.85 E-value=1.2e-08 Score=109.60 Aligned_cols=143 Identities=13% Similarity=0.140 Sum_probs=106.0
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEee--ccc-hhhHHHHHHHHHHHhccC--CCCceeEEEEeecCCCCCceeEEE
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLF--LHQ-RGALKSFMAECQALRNIR--HRNLVKIITACSTSDFQGNYFRAL 600 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~--~~~-~~~~~~~~~E~~~l~~l~--H~nIv~l~~~~~~~~~~~~~~~~l 600 (771)
...++.|....||+....+ ..+++|+.. ... .....++.+|+++++.++ +..+.++++++.+.+..+ ..|+
T Consensus 43 ~~~l~~G~sn~~y~v~~~~--~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g--~~~~ 118 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTPG--QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIG--RAFY 118 (359)
T ss_dssp EEECCC-CCSCEEEEECSS--CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTS--SCEE
T ss_pred EEEcCCcccceEEEEEECC--ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccC--CeEE
Confidence 3456788889999987653 378899875 332 123457888999999997 456888998887653222 4689
Q ss_pred EEEeccCCCCCC-CcccCCHHHHHHHHHHHHHHHHHHHhcC---------------------------------------
Q 041479 601 VYEFMHHGSLES-CPRILSFLRRLNIAIDVASALEYLHHHC--------------------------------------- 640 (771)
Q Consensus 601 v~e~~~~g~L~~-~~~~l~~~~~~~i~~~ia~gL~~LH~~~--------------------------------------- 640 (771)
||||++|..+.+ ....++..++..++.+++..|+.||+..
T Consensus 119 vme~v~G~~l~~~~~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (359)
T 3dxp_A 119 IMEFVSGRVLWDQSLPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAMD 198 (359)
T ss_dssp EEECCCCBCCCCTTCTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHHH
T ss_pred EEEecCCeecCCCccccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHHH
Confidence 999999988854 3445778888999999999999999731
Q ss_pred ----------------CCCeEecCCCCCCeeeCCCCc--eEEecccCccc
Q 041479 641 ----------------KKPIVHCDLKPSNVLLDNDMT--AHMGDFGLTRF 672 (771)
Q Consensus 641 ----------------~~~ivHrdlk~~NILl~~~~~--~kl~DfGla~~ 672 (771)
...++|+|+++.||+++.++. +.|.||+.+..
T Consensus 199 ~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 199 SLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 246999999999999987653 68999998864
No 411
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.74 E-value=1.1e-08 Score=109.28 Aligned_cols=203 Identities=13% Similarity=0.133 Sum_probs=122.2
Q ss_pred CcEEEEEcCCCCCcc-c-------CCccccCCCCCcEEEcCCCccc---------ccCCccccCCCCCCEEecccCc-Cc
Q 041479 44 QRVILLNLSGQNLTG-T-------ASPYIGNLTFLRLINLQQNNFS---------SNIPHEIGRLFRLRHIIFNSNA-LQ 105 (771)
Q Consensus 44 ~~l~~L~Ls~n~l~~-~-------~~~~~~~l~~L~~L~Ls~N~l~---------~~~p~~~~~l~~L~~L~Ls~N~-l~ 105 (771)
.+|+.|.+......+ . +..++..+++|+.|.+..+... +.++..+..+++|+.|+|++|. +.
T Consensus 107 ~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l~ 186 (362)
T 2ra8_A 107 PSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNLS 186 (362)
T ss_dssp GGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTCB
T ss_pred hhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCce
Confidence 467777777665442 1 1234567788999988765431 1244556778889999988773 11
Q ss_pred ccCCcccccCCcccccCCccccCCCCCCEEecccccCcCCCCccceeeecccccccccCccc--cCCCCCCEEeccc--C
Q 041479 106 GQIPDSRLILNKLEGNIPSELGSLLKFKGLGLANNYFTGPIPHLNMFQVSVYSLTGSIPIQL--LNITSMEYFHVSE--N 181 (771)
Q Consensus 106 ~~~p~~~l~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~lp~L~~l~l~~n~l~~~~p~~~--~~l~~L~~L~Ls~--N 181 (771)
++. +. +++|+.|+|..+.++. .....+ ..+++|+.|+|+. |
T Consensus 187 ----------------l~~-~~-~~~L~~L~L~~~~l~~-----------------~~l~~l~~~~lp~L~~L~L~~~~~ 231 (362)
T 2ra8_A 187 ----------------IGK-KP-RPNLKSLEIISGGLPD-----------------SVVEDILGSDLPNLEKLVLYVGVE 231 (362)
T ss_dssp ----------------CCS-CB-CTTCSEEEEECSBCCH-----------------HHHHHHHHSBCTTCCEEEEECBCG
T ss_pred ----------------ecc-cc-CCCCcEEEEecCCCCh-----------------HHHHHHHHccCCCCcEEEEecccc
Confidence 222 22 6778888887776651 111112 2567777777753 2
Q ss_pred cCccc-----CChhhh-hCCCCCcEEEeecCcccccCCcccc---CCCCCCEEEccccccCCCCCcCc-ccccCCCCCcE
Q 041479 182 QLVGE-----LPPHIG-FTLPNVRILLLAGNQFFGNIPHSIS---NASKLEWLDFANNSLTGLIPEDL-DSLVNCTYLEV 251 (771)
Q Consensus 182 ~l~g~-----lp~~~~-~~l~~L~~L~L~~N~l~~~~p~~~~---~l~~L~~L~Ls~N~l~~~~p~~~-~~l~~l~~L~~ 251 (771)
...|. +.+.+. ..+|+|++|+|++|.+....+..+. .+++|++|+|+.|.|+..-+..+ ..+.++++|+.
T Consensus 232 ~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~ 311 (362)
T 2ra8_A 232 DYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKF 311 (362)
T ss_dssp GGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSE
T ss_pred ccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceE
Confidence 21111 111111 2468999999999988743333332 57889999999999875322222 12356789999
Q ss_pred EEccCccccccCChhhhhcccccceeecccCc
Q 041479 252 VSLSVNSLSGTLPNSLANFSSHLRYLYMSANP 283 (771)
Q Consensus 252 L~Ls~N~l~~~~p~~~~~l~~~L~~L~Ls~N~ 283 (771)
|+|++|.|+...-..+... -...+++++|+
T Consensus 312 L~L~~n~i~d~~~~~l~~a--lg~~~~~~~~~ 341 (362)
T 2ra8_A 312 INMKYNYLSDEMKKELQKS--LPMKIDVSDSQ 341 (362)
T ss_dssp EECCSBBCCHHHHHHHHHH--CCSEEECCSBC
T ss_pred EECCCCcCCHHHHHHHHHH--cCCEEEecCCc
Confidence 9999998874333333321 12567888776
No 412
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.70 E-value=8.7e-09 Score=110.17 Aligned_cols=117 Identities=10% Similarity=0.049 Sum_probs=61.4
Q ss_pred ccccCCCCCCEEecccCcCcccCChhhhhCCCCCcEEEeecCcccccCCcccc--CCCCCCEEEccc--cccCCCC-C--
Q 041479 165 IQLLNITSMEYFHVSENQLVGELPPHIGFTLPNVRILLLAGNQFFGNIPHSIS--NASKLEWLDFAN--NSLTGLI-P-- 237 (771)
Q Consensus 165 ~~~~~l~~L~~L~Ls~N~l~g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~--~l~~L~~L~Ls~--N~l~~~~-p-- 237 (771)
..+..+++|+.|+|++|.-. .+++ + .+++|+.|+|..+.+.......+. .+++|+.|+|+. |...+.. .
T Consensus 166 ~ll~~~P~L~~L~L~g~~~l-~l~~-~--~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~ 241 (362)
T 2ra8_A 166 PVLDAMPLLNNLKIKGTNNL-SIGK-K--PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNV 241 (362)
T ss_dssp HHHHTCTTCCEEEEECCBTC-BCCS-C--BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGG
T ss_pred HHHhcCCCCcEEEEeCCCCc-eecc-c--cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHH
Confidence 33455677777777776311 3443 1 367777777777776543323333 577777777753 2211110 0
Q ss_pred --cCcccccCCCCCcEEEccCccccccCChhhhh--cccccceeecccCcCcc
Q 041479 238 --EDLDSLVNCTYLEVVSLSVNSLSGTLPNSLAN--FSSHLRYLYMSANPISG 286 (771)
Q Consensus 238 --~~~~~l~~l~~L~~L~Ls~N~l~~~~p~~~~~--l~~~L~~L~Ls~N~l~~ 286 (771)
..+. -..+++|++|+|++|.+....+..+.. ..++|++|+|+.|.|++
T Consensus 242 l~~~l~-~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d 293 (362)
T 2ra8_A 242 FRPLFS-KDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTD 293 (362)
T ss_dssp TGGGSC-TTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBH
T ss_pred HHHHHh-cCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCCh
Confidence 0110 023566777777777665433333321 11356666666666653
No 413
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.60 E-value=2.9e-09 Score=108.00 Aligned_cols=21 Identities=5% Similarity=-0.140 Sum_probs=15.7
Q ss_pred CccceeeeecCCCCcEEEEEc
Q 041479 31 FCQWLGVTCSLKYQRVILLNL 51 (771)
Q Consensus 31 ~c~w~~v~c~~~~~~l~~L~L 51 (771)
.|+|.|+.|.....++..+-.
T Consensus 77 l~~~~g~i~~~~~~ki~~~v~ 97 (267)
T 3rw6_A 77 LKAVNYKILDRENRRISIIIN 97 (267)
T ss_dssp HHHTTSSCBCTTSCBCCCEEE
T ss_pred HHhcCcEEECCCCCEEEEEEe
Confidence 678999999876667765544
No 414
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.49 E-value=8.6e-08 Score=100.35 Aligned_cols=135 Identities=16% Similarity=0.126 Sum_probs=96.8
Q ss_pred ccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccC-CCC--ceeEEEEeecCCCCCceeEEEEEEec
Q 041479 529 YESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIR-HRN--LVKIITACSTSDFQGNYFRALVYEFM 605 (771)
Q Consensus 529 l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-H~n--Iv~l~~~~~~~~~~~~~~~~lv~e~~ 605 (771)
++.|....||+.. + .+++|+.... .....+.+|+++++.+. +.. +.+.+++....+.. ...|+||||+
T Consensus 28 ~~~G~~n~v~~v~----~-~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~--~~~~~vm~~i 98 (304)
T 3sg8_A 28 SGEGNDCIAYEIN----R-DFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETY--QMSFAGFTKI 98 (304)
T ss_dssp EEECSSEEEEEST----T-SEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSC--SCSCEEEECC
T ss_pred cCCCCcceEEEEC----C-EEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCC--CcceEEEccc
Confidence 6777888888753 3 5889986432 34578899999998884 332 34455543332211 1347999999
Q ss_pred cCCCCCCC-cccCCHHHHHHHHHHHHHHHHHHHhc---------------------------------------------
Q 041479 606 HHGSLESC-PRILSFLRRLNIAIDVASALEYLHHH--------------------------------------------- 639 (771)
Q Consensus 606 ~~g~L~~~-~~~l~~~~~~~i~~~ia~gL~~LH~~--------------------------------------------- 639 (771)
+|..+... ...++..++..++.+++..+..||+.
T Consensus 99 ~G~~l~~~~~~~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 178 (304)
T 3sg8_A 99 KGVPLTPLLLNNLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDDFYR 178 (304)
T ss_dssp CCEECCHHHHHTSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHH
T ss_pred CCeECCccccccCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHHHHH
Confidence 99888642 34567778888999999999999961
Q ss_pred ----------CCCCeEecCCCCCCeeeCC--CCceEEecccCccc
Q 041479 640 ----------CKKPIVHCDLKPSNVLLDN--DMTAHMGDFGLTRF 672 (771)
Q Consensus 640 ----------~~~~ivHrdlk~~NILl~~--~~~~kl~DfGla~~ 672 (771)
..+.++|+|++|.||+++. ...+.|+||+.+..
T Consensus 179 ~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~ 223 (304)
T 3sg8_A 179 DILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAI 223 (304)
T ss_dssp HHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEE
T ss_pred HHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCcc
Confidence 0135899999999999997 45689999998864
No 415
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.43 E-value=3.7e-08 Score=99.90 Aligned_cols=85 Identities=25% Similarity=0.349 Sum_probs=55.6
Q ss_pred EecccCcCcccCChh---hhhCCCCCcEEEeecCcccc--cCCccccCCCCCCEEEccccccCCCCCcCcccccCCCCCc
Q 041479 176 FHVSENQLVGELPPH---IGFTLPNVRILLLAGNQFFG--NIPHSISNASKLEWLDFANNSLTGLIPEDLDSLVNCTYLE 250 (771)
Q Consensus 176 L~Ls~N~l~g~lp~~---~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~ 250 (771)
++++.|... .++.. +..++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+..+ +|+
T Consensus 148 l~l~~N~~~-~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l-~L~ 223 (267)
T 3rw6_A 148 IDVVLNRRS-CMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGL-KLE 223 (267)
T ss_dssp CCCCTTSHH-HHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTS-CCS
T ss_pred ccccCCHHH-HHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccC-Ccc
Confidence 556666443 33321 22357788888888888876 3456667788888888888888765 334444444 777
Q ss_pred EEEccCccccccCC
Q 041479 251 VVSLSVNSLSGTLP 264 (771)
Q Consensus 251 ~L~Ls~N~l~~~~p 264 (771)
+|+|++|.+.+.+|
T Consensus 224 ~L~L~~Npl~~~~~ 237 (267)
T 3rw6_A 224 ELWLDGNSLCDTFR 237 (267)
T ss_dssp EEECTTSTTGGGCS
T ss_pred eEEccCCcCccccC
Confidence 77777777776555
No 416
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.31 E-value=7.5e-08 Score=92.78 Aligned_cols=44 Identities=11% Similarity=0.028 Sum_probs=26.2
Q ss_pred ccccCCCCCcEEEcCCC-cccc----cCCccccCCCCCCEEecccCcCc
Q 041479 62 PYIGNLTFLRLINLQQN-NFSS----NIPHEIGRLFRLRHIIFNSNALQ 105 (771)
Q Consensus 62 ~~~~~l~~L~~L~Ls~N-~l~~----~~p~~~~~l~~L~~L~Ls~N~l~ 105 (771)
..+...+.|++|+|++| .|.. .+...+...++|++|+|++|.|.
T Consensus 30 ~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~ 78 (185)
T 1io0_A 30 RIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSN 78 (185)
T ss_dssp HHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCC
T ss_pred HHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCC
Confidence 34556666777777776 6653 13444555666666666666654
No 417
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.28 E-value=7.9e-08 Score=92.63 Aligned_cols=123 Identities=14% Similarity=0.114 Sum_probs=67.7
Q ss_pred cccccCCcceEecCCc-cceec----cCccccCCCCCCEEEccCCccccc----CCcccccccccccccccCccceecCC
Q 041479 291 EIGNLKNLIIIAIEKF-ILIRN----IPISVGYLLKLQVLSLFENNISRE----IPSSLGNFTFLTELNLCGNSIRGSVP 361 (771)
Q Consensus 291 ~~~~l~~L~~L~l~~n-~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~~p 361 (771)
.+...++|+.|+|++| .+... +...+...++|++|+|++|+|... +...+...++|++|+|++|.|...--
T Consensus 31 ~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~ 110 (185)
T 1io0_A 31 IQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGI 110 (185)
T ss_dssp HHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHH
T ss_pred HHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHH
Confidence 3445556666666665 54321 223334445566666666655421 12222333445555555555442110
Q ss_pred cccccccceeeecccCcccCCCCcCCCCCCCCCeEEC--CCCcccccCCcchhhhhcccccccEEECcCCCCC
Q 041479 362 SALGSCHQLWLDLSHNHLTGPIPLAVGNPKSIPHLDL--SKNELSGEIPSSLAWIFGYISIFAKLNLSYNNLD 432 (771)
Q Consensus 362 ~~~~~l~~l~L~Ls~N~l~~~~p~~~~~l~~L~~L~L--s~N~l~~~~p~~l~~~~~~l~~L~~L~Ls~N~l~ 432 (771)
. .+...+...++|++|+| ++|.|...-...+...+...++|+.|+|++|.+.
T Consensus 111 ~-------------------~l~~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 111 L-------------------ALVEALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp H-------------------HHHHGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred H-------------------HHHHHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 0 12334555678899999 7898875443445545556788999999998874
No 418
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.24 E-value=3e-06 Score=89.28 Aligned_cols=130 Identities=18% Similarity=0.118 Sum_probs=94.8
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCC----CCceeEEEEeecCCCCCceeEEEEE
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRH----RNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H----~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
..++.|....||+. +..+++|+.... .....+.+|.++++.+.+ ..|.+++++ + ..|+||
T Consensus 43 ~~l~~G~~n~vy~v-----g~~~vlR~~~~~--~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~-----~~~lvm 106 (320)
T 3r70_A 43 RYLSSGDDSDTFLC-----NEQYVVKVPKRD--SVRISQKRELELYRFLENCKLSYQIPAVVYQ----S-----DRFNIM 106 (320)
T ss_dssp EEEEECSSEEEEEE-----TTTEEEEEESSH--HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----C-----SSCEEE
T ss_pred EeCCCCCCceEEEE-----CCEEEEEeCCcH--HHHHHHHHHHHHHHHHHhcCCCCCcceEEec----C-----CcEEEE
Confidence 34677888889987 336888876432 224568999999988876 223444444 2 247999
Q ss_pred EeccCCCCCC-CcccCCHHHHHHHHHHHHHHHHHHHhcCC----------------------------------------
Q 041479 603 EFMHHGSLES-CPRILSFLRRLNIAIDVASALEYLHHHCK---------------------------------------- 641 (771)
Q Consensus 603 e~~~~g~L~~-~~~~l~~~~~~~i~~~ia~gL~~LH~~~~---------------------------------------- 641 (771)
||++|.++.. ....++..++..++.+++..+..||+...
T Consensus 107 e~i~G~~l~~~~~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (320)
T 3r70_A 107 KYIKGERITYEQYHKLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDEML 186 (320)
T ss_dssp ECCCCBCCCHHHHTTSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHHHH
T ss_pred eecCCccccccccccCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhcccccccch
Confidence 9999988863 23345677778888999999999985321
Q ss_pred --------------------CCeEecCCCCCCeeeCCCCceEEecccCccc
Q 041479 642 --------------------KPIVHCDLKPSNVLLDNDMTAHMGDFGLTRF 672 (771)
Q Consensus 642 --------------------~~ivHrdlk~~NILl~~~~~~kl~DfGla~~ 672 (771)
+.++|+|++|.||+++.+..+.|+||+.+..
T Consensus 187 ~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~ 237 (320)
T 3r70_A 187 EHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNV 237 (320)
T ss_dssp HHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCccccc
Confidence 2359999999999999866679999998864
No 419
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.14 E-value=1e-05 Score=83.63 Aligned_cols=74 Identities=18% Similarity=0.075 Sum_probs=56.6
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCC---CceeEEEEeecCCCCCceeEEEEEE
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHR---NLVKIITACSTSDFQGNYFRALVYE 603 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~---nIv~l~~~~~~~~~~~~~~~~lv~e 603 (771)
..++.|..+.||+++..++ +.|+||+...........|.+|++.++.++|. .+.+++++. . .++|||
T Consensus 21 ~~l~gG~~n~vy~v~~~dG-~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~--~-------~~lvme 90 (288)
T 3d1u_A 21 AERGHSHRWHLYRVELADG-TPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD--D-------RTLAME 90 (288)
T ss_dssp EEEEEETTEEEEEEEETTS-CEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE--T-------TEEEEE
T ss_pred eeeCCcchhheEEEEeCCC-CeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec--C-------cEEEEE
Confidence 4578888899999987654 48999997543333346789999999999865 577888763 1 389999
Q ss_pred eccCCCC
Q 041479 604 FMHHGSL 610 (771)
Q Consensus 604 ~~~~g~L 610 (771)
|++++.+
T Consensus 91 ~l~g~~~ 97 (288)
T 3d1u_A 91 WVDERPP 97 (288)
T ss_dssp CCCCCCC
T ss_pred ecccCCC
Confidence 9999876
No 420
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.13 E-value=9.5e-06 Score=84.75 Aligned_cols=133 Identities=15% Similarity=0.093 Sum_probs=91.5
Q ss_pred ccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCC---CceeEEEEeecCCCCCceeEEEEEEec
Q 041479 529 YESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHR---NLVKIITACSTSDFQGNYFRALVYEFM 605 (771)
Q Consensus 529 l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~---nIv~l~~~~~~~~~~~~~~~~lv~e~~ 605 (771)
++.|....||+. + ..++||+-. .......+.+|+++++.+.+. -|.+.+.++.... ...|+||||+
T Consensus 27 l~~G~~n~v~~v----g-~~~VlR~~~--~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~----g~~~~v~e~i 95 (306)
T 3tdw_A 27 LGEGFRNYAILV----N-GDWVFRFPK--SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSD----GNPFVGYRKV 95 (306)
T ss_dssp EEECSSEEEEEE----T-TTEEEEEES--SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTT----SCEEEEEECC
T ss_pred cCCCcceeEEEE----C-CEEEEEecC--CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCC----CceEEEEecc
Confidence 566777788887 3 368888853 233457899999999999752 3556666654221 1468999999
Q ss_pred cCCCCCCC-cccCCHHHHHHHHHHHHHHHHHHHhc---------------------------------------------
Q 041479 606 HHGSLESC-PRILSFLRRLNIAIDVASALEYLHHH--------------------------------------------- 639 (771)
Q Consensus 606 ~~g~L~~~-~~~l~~~~~~~i~~~ia~gL~~LH~~--------------------------------------------- 639 (771)
+|..+... ...++..++..++.+++..|..||+.
T Consensus 96 ~G~~l~~~~~~~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~ 175 (306)
T 3tdw_A 96 QGQILGEDGMAVLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTLR 175 (306)
T ss_dssp CSEECHHHHHTTSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHHH
T ss_pred CCeECchhhhhhCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHHH
Confidence 99877542 22345556666666677666666642
Q ss_pred ------------CCCCeEecCCCCCCeeeCC---CCc-eEEecccCccc
Q 041479 640 ------------CKKPIVHCDLKPSNVLLDN---DMT-AHMGDFGLTRF 672 (771)
Q Consensus 640 ------------~~~~ivHrdlk~~NILl~~---~~~-~kl~DfGla~~ 672 (771)
..+.++|+|++|.||+++. ++. +.|+||+.+..
T Consensus 176 ~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~ 224 (306)
T 3tdw_A 176 FQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAI 224 (306)
T ss_dssp HHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEE
T ss_pred HHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCC
Confidence 1235699999999999987 455 58999998763
No 421
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.04 E-value=1.3e-05 Score=81.90 Aligned_cols=128 Identities=18% Similarity=0.033 Sum_probs=92.0
Q ss_pred ceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccC-CCCceeEEEEeecCCCCCceeEEEEEEeccCCCCCCC
Q 041479 535 ATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIR-HRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESC 613 (771)
Q Consensus 535 ~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~ 613 (771)
++||+.....++..++||+-... ...++.+|..+++.+. +--|-++++++.+.+ ..|+|||+++|.++.+.
T Consensus 39 ~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~-----~~~lvme~l~G~~~~~~ 110 (272)
T 4gkh_A 39 ATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPD-----DAWLLTTAIPGKTAFQV 110 (272)
T ss_dssp CEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETT-----EEEEEEECCCSEEHHHH
T ss_pred CeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECC-----eEEEEEEeeCCcccccc
Confidence 46999888777778999987543 3457888999998885 333567778877665 67999999998776443
Q ss_pred cccCCHHHHHHHHHHHHHHHHHHHhcC-----------------------------------------------------
Q 041479 614 PRILSFLRRLNIAIDVASALEYLHHHC----------------------------------------------------- 640 (771)
Q Consensus 614 ~~~l~~~~~~~i~~~ia~gL~~LH~~~----------------------------------------------------- 640 (771)
... .......++.+++..+.-||+..
T Consensus 111 ~~~-~~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 189 (272)
T 4gkh_A 111 LEE-YPDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEMHKLLPF 189 (272)
T ss_dssp HHH-CGGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHHHHTTCCC
T ss_pred ccC-CHHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHHHHhcccc
Confidence 111 12234456667777777777421
Q ss_pred --CCCeEecCCCCCCeeeCCCCceEEecccCcc
Q 041479 641 --KKPIVHCDLKPSNVLLDNDMTAHMGDFGLTR 671 (771)
Q Consensus 641 --~~~ivHrdlk~~NILl~~~~~~kl~DfGla~ 671 (771)
.+.++|+|+.+.||+++..+.+-|+||+.+.
T Consensus 190 ~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~ 222 (272)
T 4gkh_A 190 SPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVG 222 (272)
T ss_dssp CCCEEEECSCCCTTSEEEETTEEEEECCCTTCE
T ss_pred cCCcEEEcCCCCCCeEEEECCeEEEEEECcccc
Confidence 1137999999999999987777899999775
No 422
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=97.93 E-value=4.6e-05 Score=81.47 Aligned_cols=131 Identities=15% Similarity=0.163 Sum_probs=84.5
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCC--ceeEEEEeecCCCCCceeEEEEEEe
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRN--LVKIITACSTSDFQGNYFRALVYEF 604 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~n--Iv~l~~~~~~~~~~~~~~~~lv~e~ 604 (771)
..++.|....+|+... +++.+++|+.... ..+.+|+.+++.+.... +.++++++...+ ...|+||||
T Consensus 47 ~~l~gG~~n~~y~v~~--~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~----g~~~lv~e~ 115 (362)
T 3ovc_A 47 MQLSEGEESRAFSFDV--GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSE----SLTYCISRR 115 (362)
T ss_dssp EEEEECSSEEEEEEEE--TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSS----SCEEEEEEC
T ss_pred EECCCCCcceEEEEEE--CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCC----CCeEEEEEe
Confidence 3456777788998875 4568999987432 25888999998886433 456666655432 156899999
Q ss_pred ccCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHhc---------------------------------------------
Q 041479 605 MHHGSLESCPRILSFLRRLNIAIDVASALEYLHHH--------------------------------------------- 639 (771)
Q Consensus 605 ~~~g~L~~~~~~l~~~~~~~i~~~ia~gL~~LH~~--------------------------------------------- 639 (771)
++|..+.+. +..+...++.+++..|.-||+.
T Consensus 116 l~G~~l~~l----~~~~~~~~~~~lg~~La~LH~~~~~~~~gl~~~~~~~~~~~~~w~~~~~~~~~~~l~~~~~~~~~~~ 191 (362)
T 3ovc_A 116 AQGVTLQDL----PETELPAVLQPVAEAMDAIAAADLSQTSGFGPFGPQGIGQYTTWRDFICAIADPHVYHWQTVMDDTV 191 (362)
T ss_dssp CCSEETTTS----CGGGSGGGHHHHHHHHHHHHHCCCTTCBCEEEECTTSBEEESSHHHHHHGGGCTTTCCHHHHCCTTT
T ss_pred cCCCCcccC----CHHHHHHHHHHHHHHHHHHhcCCCccccCccCCCCCCCCccccHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 998766432 1111112222222222222221
Q ss_pred -----------------C--CCCeEecCCCCCCeeeCCCCceEEecccCccc
Q 041479 640 -----------------C--KKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRF 672 (771)
Q Consensus 640 -----------------~--~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~ 672 (771)
. .+.++|+|+.+.||+++..+.+.|+||+.+..
T Consensus 192 ~~~~~~~~~~l~~~l~~lp~~~~l~HgDl~~~Nil~~~~~~~~viD~~~~~~ 243 (362)
T 3ovc_A 192 SASVAQALDELMLWAEDCPEVRHLVHADFGSNNVLTDNGRITAVIDWSEAMF 243 (362)
T ss_dssp HHHHHHHHHHHHHHGGGCCCCCEEECSSCSSTTEEEETTEEEEECCCTTCEE
T ss_pred cccchHHHHHHHHHHhhCCCCcEEEeCCCCCCeEEEeCCCEEEEECCccccc
Confidence 1 14579999999999998777788999998864
No 423
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=97.75 E-value=4.4e-05 Score=81.51 Aligned_cols=140 Identities=12% Similarity=0.045 Sum_probs=86.6
Q ss_pred cccccceEEEEEec---C---CCeEEEEEEeeccc---hhhHHHHHHHHHHHhccC-C--CCceeEEEEeecCCCCCcee
Q 041479 530 ESLVKATVYKGILD---L---DQTFIAVKVLFLHQ---RGALKSFMAECQALRNIR-H--RNLVKIITACSTSDFQGNYF 597 (771)
Q Consensus 530 ~~~~~~~Vy~~~~~---~---~~~~vAvK~~~~~~---~~~~~~~~~E~~~l~~l~-H--~nIv~l~~~~~~~~~~~~~~ 597 (771)
+.|....+|+.... + +++.+++|+..... ......+.+|+.+++.++ + -.+.++++++.+.+..+ .
T Consensus 30 ~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~g--~ 107 (357)
T 3ats_A 30 STGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVLG--T 107 (357)
T ss_dssp TTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTTS--S
T ss_pred CCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCccC--C
Confidence 66777889987654 1 14578888865432 101246778888888874 3 35677888765543212 3
Q ss_pred EEEEEEeccCCCCCCCc---------ccCCHHHHHHHHHHHHHHHHHHHh------------------------------
Q 041479 598 RALVYEFMHHGSLESCP---------RILSFLRRLNIAIDVASALEYLHH------------------------------ 638 (771)
Q Consensus 598 ~~lv~e~~~~g~L~~~~---------~~l~~~~~~~i~~~ia~gL~~LH~------------------------------ 638 (771)
.|+||||++|..+.+.. ..++..++..++.++++.|.-||+
T Consensus 108 ~~~v~e~l~G~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~La~LH~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 187 (357)
T 3ats_A 108 PFFLMDYVEGVVPPDVMPYTFGDNWFADAPAERQRQLQDATVAALATLHSIPNAQNTFSFLTQGRTSDTTLHRHFNWVRS 187 (357)
T ss_dssp CEEEEECCCCBCCCBTTBGGGSCSTTTTSCHHHHHHHHHHHHHHHHHHTTCSSHHHHTGGGC-----CCHHHHHHHHHHH
T ss_pred ceEEEEecCCCChhhcCcccccccccCCCCHHHHHHHHHHHHHHHHHHhCCCCccCChhhccCCCCCCchHHHHHHHHHH
Confidence 57999999987765320 012333333333333333333331
Q ss_pred ------------------------c-------CCCCeEecCCCCCCeeeCCCCceEEecccCcc
Q 041479 639 ------------------------H-------CKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTR 671 (771)
Q Consensus 639 ------------------------~-------~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~ 671 (771)
. ....++|+|+.+.||++++...+.|+||+.+.
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~l~HgDl~~~Nil~~~~~~~~vIDwe~a~ 251 (357)
T 3ats_A 188 WYDFAVEGIGRSPLLERTFEWLQSHWPDDAAAREPVLLWGDARVGNVLYRDFQPVAVLDWEMVA 251 (357)
T ss_dssp HHHHHHHHHCCCHHHHHHHHHHHHTCCHHHHHSCCEEECSSCSGGGEEEETTEEEEECCGGGCE
T ss_pred HHHhhccCCCCChHHHHHHHHHHHhCCCcccCCCceEEeCCCCCCeEEEeCCcEEEEEcccccc
Confidence 1 13468999999999999964457999999775
No 424
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.68 E-value=0.00015 Score=78.60 Aligned_cols=75 Identities=13% Similarity=0.040 Sum_probs=47.4
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeeccch-------hhHHHHHHHHHHHhccCC--CCce-eEEEEeecCCCCCce
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLHQR-------GALKSFMAECQALRNIRH--RNLV-KIITACSTSDFQGNY 596 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~-------~~~~~~~~E~~~l~~l~H--~nIv-~l~~~~~~~~~~~~~ 596 (771)
..+|.|..+.||++....+++.|+||....... ....++..|+++++.+.. |..+ +++.+. .+
T Consensus 36 ~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~d--~~----- 108 (397)
T 2olc_A 36 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYSD--TE----- 108 (397)
T ss_dssp EECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEEE--TT-----
T ss_pred EECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEEc--CC-----
Confidence 457889999999998766666899998643211 123467789999888742 4444 555442 22
Q ss_pred eEEEEEEeccCC
Q 041479 597 FRALVYEFMHHG 608 (771)
Q Consensus 597 ~~~lv~e~~~~g 608 (771)
..++||||+++.
T Consensus 109 ~~~lvmE~l~g~ 120 (397)
T 2olc_A 109 MAVTVMEDLSHL 120 (397)
T ss_dssp TTEEEECCCTTS
T ss_pred ccEEEEEeCCCc
Confidence 237999999763
No 425
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.35 E-value=0.0014 Score=67.97 Aligned_cols=74 Identities=14% Similarity=0.002 Sum_probs=55.5
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccC---CCCceeEEEEeecCCCCCceeEEEEEE
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIR---HRNLVKIITACSTSDFQGNYFRALVYE 603 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~---H~nIv~l~~~~~~~~~~~~~~~~lv~e 603 (771)
..++.|....+|+... ++..++||+.... ....+.+|++.|+.+. ...|.+.++++...+ ..++|||
T Consensus 42 ~~l~gG~~n~~y~v~~--~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g-----~~~lvme 111 (312)
T 3jr1_A 42 EKLYSGEMNEIWLIND--EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQG-----HSFLLLE 111 (312)
T ss_dssp EEECCSSSSEEEEEES--SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSS-----EEEEEEE
T ss_pred EEeCCccceeeeEEEE--CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCC-----ceEEEEE
Confidence 4467788889999875 3448889987533 3567889999988884 356778888776554 6799999
Q ss_pred eccCCCC
Q 041479 604 FMHHGSL 610 (771)
Q Consensus 604 ~~~~g~L 610 (771)
|+++..+
T Consensus 112 ~l~G~~~ 118 (312)
T 3jr1_A 112 ALNKSKN 118 (312)
T ss_dssp CCCCCCC
T ss_pred eccCCCC
Confidence 9998875
No 426
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.23 E-value=0.00017 Score=67.76 Aligned_cols=82 Identities=11% Similarity=0.208 Sum_probs=36.0
Q ss_pred CCCEEEccccccCCCCCcCcccccCCCCCcEEEccCcc-ccccCChhhhhc---ccccceeecccCc-CcccCccccccc
Q 041479 221 KLEWLDFANNSLTGLIPEDLDSLVNCTYLEVVSLSVNS-LSGTLPNSLANF---SSHLRYLYMSANP-ISGSIPTEIGNL 295 (771)
Q Consensus 221 ~L~~L~Ls~N~l~~~~p~~~~~l~~l~~L~~L~Ls~N~-l~~~~p~~~~~l---~~~L~~L~Ls~N~-l~~~~p~~~~~l 295 (771)
+|+.||++++.|+. ..+..+.++++|+.|+|++|. |+..--..+..+ .++|++|+|+++. |+..--..+..+
T Consensus 62 ~L~~LDLs~~~Itd---~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~ 138 (176)
T 3e4g_A 62 KIQAIDATDSCIMS---IGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHF 138 (176)
T ss_dssp CEEEEEEESCCCCG---GGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGC
T ss_pred eEeEEeCcCCCccH---HHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcC
Confidence 45555555555432 233334555556666666553 432211122221 1246666666653 543222223334
Q ss_pred CCcceEecCC
Q 041479 296 KNLIIIAIEK 305 (771)
Q Consensus 296 ~~L~~L~l~~ 305 (771)
++|+.|++++
T Consensus 139 ~~L~~L~L~~ 148 (176)
T 3e4g_A 139 RNLKYLFLSD 148 (176)
T ss_dssp TTCCEEEEES
T ss_pred CCCCEEECCC
Confidence 4444444443
No 427
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.15 E-value=0.0026 Score=66.99 Aligned_cols=31 Identities=19% Similarity=0.248 Sum_probs=27.6
Q ss_pred CCCeEecCCCCCCeeeCCCCceEEecccCcc
Q 041479 641 KKPIVHCDLKPSNVLLDNDMTAHMGDFGLTR 671 (771)
Q Consensus 641 ~~~ivHrdlk~~NILl~~~~~~kl~DfGla~ 671 (771)
...++|+|+++.||+++.++.+.|+||+.+.
T Consensus 221 ~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 221 SPNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp SCCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred cCceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 4689999999999999877889999999764
No 428
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.11 E-value=0.00015 Score=68.11 Aligned_cols=84 Identities=11% Similarity=0.091 Sum_probs=59.3
Q ss_pred CcEEEEEcCCCCCcccCCccccCCCCCcEEEcCCCc-ccccCCccccCC----CCCCEEecccCc-CcccCCcccccCCc
Q 041479 44 QRVILLNLSGQNLTGTASPYIGNLTFLRLINLQQNN-FSSNIPHEIGRL----FRLRHIIFNSNA-LQGQIPDSRLILNK 117 (771)
Q Consensus 44 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l----~~L~~L~Ls~N~-l~~~~p~~~l~~n~ 117 (771)
-+++.|||+++.++...-..+..+++|++|+|+++. |+..--..++.+ ++|++|+|+++. ++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~IT------------ 128 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVT------------ 128 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCC------------
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCC------------
Confidence 478999999988886655667888999999999984 765333445554 368899998875 44
Q ss_pred ccccCCccccCCCCCCEEeccccc
Q 041479 118 LEGNIPSELGSLLKFKGLGLANNY 141 (771)
Q Consensus 118 l~~~~p~~~~~l~~L~~L~Ls~N~ 141 (771)
..--..+..+++|+.|+|++..
T Consensus 129 --D~Gl~~L~~~~~L~~L~L~~c~ 150 (176)
T 3e4g_A 129 --DKGIIALHHFRNLKYLFLSDLP 150 (176)
T ss_dssp --HHHHHHGGGCTTCCEEEEESCT
T ss_pred --HHHHHHHhcCCCCCEEECCCCC
Confidence 1111235667888888888763
No 429
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.97 E-value=0.0012 Score=58.84 Aligned_cols=61 Identities=25% Similarity=0.306 Sum_probs=45.7
Q ss_pred eeecccCccc-CCCCcCCCCCCCCCeEECCCCcccccCCcchhhhhcccccccEEECcCCCCCCCCCc
Q 041479 371 WLDLSHNHLT-GPIPLAVGNPKSIPHLDLSKNELSGEIPSSLAWIFGYISIFAKLNLSYNNLDGDVPR 437 (771)
Q Consensus 371 ~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~l~~L~~L~Ls~N~l~~~~p~ 437 (771)
.++-+++.|+ ..+|..+ .++|+.|+|++|+|+...++.| ..+++|+.|+|++|++.+.+--
T Consensus 12 ~v~Cs~~~L~~~~vP~~l--p~~l~~L~Ls~N~l~~l~~~~f----~~l~~L~~L~L~~NP~~CdC~l 73 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAF--PVDTTELVLTGNNLTALPPGLL----DALPALRTAHLGANPWRCDCRL 73 (130)
T ss_dssp EEECCSSCCCTTTSCSCC--CTTCSEEECTTSCCSSCCTTTG----GGCTTCCEEECCSSCCBCSGGG
T ss_pred EEEeCCCCCccccCCCCC--CcCCCEEECCCCcCCccChhhh----hhccccCEEEecCCCeeccCcc
Confidence 5788888886 3455433 4578999999999995555444 4788999999999999887654
No 430
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=96.91 E-value=0.0016 Score=66.96 Aligned_cols=75 Identities=15% Similarity=0.042 Sum_probs=51.8
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccC-C--CCceeEEEEeecCCCCCceeEEEEE
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIR-H--RNLVKIITACSTSDFQGNYFRALVY 602 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-H--~nIv~l~~~~~~~~~~~~~~~~lv~ 602 (771)
...+|.|..+.||+.+..++. .|.||+-..........|.+|++.|+.+. . --+.+.+++ ..+ ++||
T Consensus 20 v~~~g~G~~~~vyrv~l~DG~-~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~--~~~-------~lv~ 89 (288)
T 3f7w_A 20 VAERGHSHRWHLYRVELADGT-PLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW--DDR-------TLAM 89 (288)
T ss_dssp EEEEEEETTEEEEEEEETTSC-EEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE--ETT-------EEEE
T ss_pred EEecCCCCCeEEEEEEECCCC-EEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec--cCc-------eEEE
Confidence 345688888999999987654 89999875444333456788999988874 2 234455544 222 7899
Q ss_pred EeccCCCC
Q 041479 603 EFMHHGSL 610 (771)
Q Consensus 603 e~~~~g~L 610 (771)
||++++..
T Consensus 90 e~l~~~~~ 97 (288)
T 3f7w_A 90 EWVDERPP 97 (288)
T ss_dssp ECCCCCCC
T ss_pred EeecccCC
Confidence 99987654
No 431
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.87 E-value=0.00094 Score=59.60 Aligned_cols=56 Identities=18% Similarity=0.245 Sum_probs=30.5
Q ss_pred EEecccCcCc-ccCChhhhhCCCCCcEEEeecCcccccCCccccCCCCCCEEEccccccC
Q 041479 175 YFHVSENQLV-GELPPHIGFTLPNVRILLLAGNQFFGNIPHSISNASKLEWLDFANNSLT 233 (771)
Q Consensus 175 ~L~Ls~N~l~-g~lp~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 233 (771)
.++.+++.++ ..+|..+. ++|+.|+|++|+|+.+.++.|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp---~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP---VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC---TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC---cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 4555666654 24554322 34566666666666555555555666666666655543
No 432
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=96.85 E-value=0.006 Score=66.37 Aligned_cols=31 Identities=19% Similarity=0.414 Sum_probs=27.2
Q ss_pred CCCeEecCCCCCCeeeCCCCceEEecccCccc
Q 041479 641 KKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRF 672 (771)
Q Consensus 641 ~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~ 672 (771)
.+.++|+|++|.||+++.++ ++++||+.+..
T Consensus 231 ~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~ 261 (420)
T 2pyw_A 231 AQALIHGDLHTGSVMVTQDS-TQVIDPEFSFY 261 (420)
T ss_dssp CCEEECSCCSGGGEEECSSC-EEECCCTTCEE
T ss_pred CCeEEecCCCCCcEEEeCCC-CEEEeCccccc
Confidence 35799999999999998776 99999998864
No 433
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.71 E-value=0.00032 Score=67.11 Aligned_cols=44 Identities=9% Similarity=0.147 Sum_probs=22.1
Q ss_pred CCCCCCCCeEECCCC---cccccCCcchhhhhcccccccEEECcCCC
Q 041479 387 VGNPKSIPHLDLSKN---ELSGEIPSSLAWIFGYISIFAKLNLSYNN 430 (771)
Q Consensus 387 ~~~l~~L~~L~Ls~N---~l~~~~p~~l~~~~~~l~~L~~L~Ls~N~ 430 (771)
+..-+.|++|+|++| ++.......++..+..-+.|+.|+++.|.
T Consensus 122 L~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~ 168 (197)
T 1pgv_A 122 TLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFAS 168 (197)
T ss_dssp TTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCC
T ss_pred HhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCC
Confidence 334455777777654 33322222233333345666677766553
No 434
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.57 E-value=0.0036 Score=64.75 Aligned_cols=127 Identities=13% Similarity=0.167 Sum_probs=73.9
Q ss_pred cccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCc-eeEEEEeecCCCCCceeEEEEEEe
Q 041479 526 NVSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNL-VKIITACSTSDFQGNYFRALVYEF 604 (771)
Q Consensus 526 ~~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nI-v~l~~~~~~~~~~~~~~~~lv~e~ 604 (771)
...++.|....+|+. + .+++|+....... ..+..+|+.+++.+....+ .++++++.+.+ ++|+||
T Consensus 23 i~~l~gG~tN~~~~~-----~-~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~~~~~~-------~~v~e~ 88 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----G-DLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHVDPATG-------VMVTRY 88 (301)
T ss_dssp CEEEESCSSEEEEEE-----T-TEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEECTTTC-------CEEEEC
T ss_pred eeEcCCcccccccee-----e-eEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEEECCCC-------EEEEee
Confidence 445677888889998 2 5888887543211 1123457777776642222 35555543322 689999
Q ss_pred c-cCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHhc--------------------------------------------
Q 041479 605 M-HHGSLESCPRILSFLRRLNIAIDVASALEYLHHH-------------------------------------------- 639 (771)
Q Consensus 605 ~-~~g~L~~~~~~l~~~~~~~i~~~ia~gL~~LH~~-------------------------------------------- 639 (771)
+ ++..+... ....+..+..++++.|+-+|+.
T Consensus 89 i~~g~~l~~~----~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~ 164 (301)
T 3dxq_A 89 IAGAQTMSPE----KFKTRPGSPARAGEAFRKLHGSGAVFPFRFELFAMIDDYLKVLSTKNVTLPAGYHDVVREAGGVRS 164 (301)
T ss_dssp CTTCEECCHH----HHHHSTTHHHHHHHHHHHHHTSCCCCSSBCCHHHHHHHHHHHHC--CCCCCTTHHHHHHHHHHHHH
T ss_pred cCCCccCCHh----hHhhhHHHHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHHH
Confidence 9 55444310 0000012334444444444432
Q ss_pred ------CCCCeEecCCCCCCeeeCCCCceEEecccCcc
Q 041479 640 ------CKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTR 671 (771)
Q Consensus 640 ------~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~ 671 (771)
....++|+|+.+.||+ ..++.+.++||..+.
T Consensus 165 ~l~~~~~~~~l~HgDl~~~Nil-~~~~~~~lID~e~a~ 201 (301)
T 3dxq_A 165 ALAAHPLPLAACHCDPLCENFL-DTGERMWIVDWEYSG 201 (301)
T ss_dssp HHHSSCCCCEEECSCCCGGGEE-ECSSCEEECCCTTCE
T ss_pred HHHhcCCCceeeccCCCcCCEE-ECCCCEEEEeccccc
Confidence 1234799999999999 556778999998775
No 435
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.27 E-value=0.012 Score=64.61 Aligned_cols=74 Identities=14% Similarity=0.004 Sum_probs=46.3
Q ss_pred ccccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCc-eeEEEEeecCCCCCceeEEEEEEec
Q 041479 527 VSYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNL-VKIITACSTSDFQGNYFRALVYEFM 605 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nI-v~l~~~~~~~~~~~~~~~~lv~e~~ 605 (771)
..++.|....+|+.....++..|++|+........ -+-.+|..+++.+...++ .++++++ .+ .+||||+
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~-idR~~E~~vl~~L~~~gl~P~ll~~~--~~-------G~v~e~I 183 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEI-INREREKKISCILYNKNIAKKIYVFF--TN-------GRIEEFM 183 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-CCSC-SCHHHHHHHHHHHTTSSSBCCEEEEE--TT-------EEEEECC
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCChhhh-cCHHHHHHHHHHHHhcCCCCCEEEEe--CC-------eEEEEee
Confidence 34567777889999876544688899874322111 112578888888864444 4666665 22 2599999
Q ss_pred cCCCC
Q 041479 606 HHGSL 610 (771)
Q Consensus 606 ~~g~L 610 (771)
+|..+
T Consensus 184 ~G~~l 188 (458)
T 2qg7_A 184 DGYAL 188 (458)
T ss_dssp CSEEC
T ss_pred CCccC
Confidence 87555
No 436
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.16 E-value=0.0063 Score=63.44 Aligned_cols=139 Identities=12% Similarity=0.096 Sum_probs=74.4
Q ss_pred cccccccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCC--ceeEEEEeecCCC--CCceeEEEEEE
Q 041479 528 SYESLVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRN--LVKIITACSTSDF--QGNYFRALVYE 603 (771)
Q Consensus 528 ~l~~~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~n--Iv~l~~~~~~~~~--~~~~~~~lv~e 603 (771)
.++.|....+|+....++ .+++|+..... ..+++..|+.++..++... +.+++... ++.. ......+++||
T Consensus 29 ~i~~G~~n~~~~v~~~~g--~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP~~~~~~-~g~~~~~~~g~~~~l~~ 103 (322)
T 2ppq_A 29 GIAEGVENSNFLLHTTKD--PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLPLPRK-DGELLGELSGRPAALIS 103 (322)
T ss_dssp EECC---EEEEEEEESSC--CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBCCBT-TCCSCEEETTEEEEEEE
T ss_pred ccCCCcccceEEEEeCCc--cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCCcccCCC-CCCEEEEECCEEEEEEE
Confidence 345667778999876543 68899886421 1234556777776664211 22222110 1100 00014589999
Q ss_pred eccCCCCCCC------------------ccc--------C---CHHHHHH------------HHHHHHHHHHHHHhc---
Q 041479 604 FMHHGSLESC------------------PRI--------L---SFLRRLN------------IAIDVASALEYLHHH--- 639 (771)
Q Consensus 604 ~~~~g~L~~~------------------~~~--------l---~~~~~~~------------i~~~ia~gL~~LH~~--- 639 (771)
|++|..+... ... . .|..... +...+...+++++..
T Consensus 104 ~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~ 183 (322)
T 2ppq_A 104 FLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPK 183 (322)
T ss_dssp CCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCC
T ss_pred eCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCcc
Confidence 9998765321 000 0 1221100 011234455555532
Q ss_pred -CCCCeEecCCCCCCeeeCCCCceEEecccCcc
Q 041479 640 -CKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTR 671 (771)
Q Consensus 640 -~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~ 671 (771)
....++|+|+.+.||+++.+..+.|+||+.+.
T Consensus 184 ~~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~ 216 (322)
T 2ppq_A 184 DLPAGVIHADLFQDNVFFLGDELSGLIDFYFAC 216 (322)
T ss_dssp SSCEEEECSCCCGGGEEEETTEEEEECCCTTCE
T ss_pred cCCcccCCCCCCccCEEEeCCceEEEecchhcc
Confidence 12469999999999999877666899999775
No 437
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.07 E-value=0.0098 Score=64.80 Aligned_cols=72 Identities=15% Similarity=0.194 Sum_probs=47.0
Q ss_pred cccccccceEEEEEecC-------CCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCc-eeEEEEeecCCCCCceeEE
Q 041479 528 SYESLVKATVYKGILDL-------DQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNL-VKIITACSTSDFQGNYFRA 599 (771)
Q Consensus 528 ~l~~~~~~~Vy~~~~~~-------~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nI-v~l~~~~~~~~~~~~~~~~ 599 (771)
.++.|....+|+..... +++.|++|+.... ...+.+.+|..+++.+...++ .++++.+. + .
T Consensus 80 ~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~--~~~~~li~E~~~l~~L~~~g~~P~l~~~~~--~-------g 148 (429)
T 1nw1_A 80 RIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP--ETESHLVAESVIFTLLSERHLGPKLYGIFS--G-------G 148 (429)
T ss_dssp EECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC--CCHHHHHHHHHHHHHHHHTTSSSCEEEEET--T-------E
T ss_pred EeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC--CcHHHHHHHHHHHHHHHhCCCCCcEEEEeC--C-------C
Confidence 45677778899998763 2458889987331 112456689999888853333 56666542 2 3
Q ss_pred EEEEeccCCCC
Q 041479 600 LVYEFMHHGSL 610 (771)
Q Consensus 600 lv~e~~~~g~L 610 (771)
+||||++|..+
T Consensus 149 ~v~e~l~G~~l 159 (429)
T 1nw1_A 149 RLEEYIPSRPL 159 (429)
T ss_dssp EEECCCCEEEC
T ss_pred EEEEEeCCccc
Confidence 89999986554
No 438
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=95.97 E-value=0.012 Score=62.88 Aligned_cols=134 Identities=10% Similarity=0.113 Sum_probs=77.5
Q ss_pred cccccccceEEEEEecC-------CCeEEEEEEeeccchhhHHHHHHHHHHHhccC-CCCceeEEEEeecCCCCCceeEE
Q 041479 528 SYESLVKATVYKGILDL-------DQTFIAVKVLFLHQRGALKSFMAECQALRNIR-HRNLVKIITACSTSDFQGNYFRA 599 (771)
Q Consensus 528 ~l~~~~~~~Vy~~~~~~-------~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~~~~~~ 599 (771)
.+..|....+|+....+ +++.|++|+.... ........+|.++++.+. +.-..++++++. + .
T Consensus 57 ~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~--~-------g 126 (379)
T 3feg_A 57 PVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFP--E-------G 126 (379)
T ss_dssp EC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEET--T-------E
T ss_pred EcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcC--C-------c
Confidence 45566677789988753 2358889986321 223456678999998885 322355665542 2 2
Q ss_pred EEEEeccCCCCCCC-------------------------cccCC--HHHHHHHHHHHH-------------------HHH
Q 041479 600 LVYEFMHHGSLESC-------------------------PRILS--FLRRLNIAIDVA-------------------SAL 633 (771)
Q Consensus 600 lv~e~~~~g~L~~~-------------------------~~~l~--~~~~~~i~~~ia-------------------~gL 633 (771)
+||||++|..+..- .+... |.+..++..++. ..+
T Consensus 127 ~v~e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~ 206 (379)
T 3feg_A 127 RLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEM 206 (379)
T ss_dssp EEEECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHH
T ss_pred cEEEEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHH
Confidence 89999998665311 01111 233333333221 122
Q ss_pred HHHHh----c-CCCCeEecCCCCCCeeeCCC----CceEEecccCcc
Q 041479 634 EYLHH----H-CKKPIVHCDLKPSNVLLDND----MTAHMGDFGLTR 671 (771)
Q Consensus 634 ~~LH~----~-~~~~ivHrdlk~~NILl~~~----~~~kl~DfGla~ 671 (771)
++|.. . ....++|+|+.+.||+++.+ +.+.++||..|.
T Consensus 207 ~~L~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~ 253 (379)
T 3feg_A 207 GNLRKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSS 253 (379)
T ss_dssp HHHHHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCE
T ss_pred HHHHHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCC
Confidence 33321 1 12368999999999999876 689999998764
No 439
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=95.90 E-value=0.0024 Score=60.98 Aligned_cols=70 Identities=16% Similarity=0.186 Sum_probs=39.0
Q ss_pred cccCCCCCCEEEcccc-ccCCCCCcC-cccccCCCCCcEEEccCccccccC----ChhhhhcccccceeecccCcCc
Q 041479 215 SISNASKLEWLDFANN-SLTGLIPED-LDSLVNCTYLEVVSLSVNSLSGTL----PNSLANFSSHLRYLYMSANPIS 285 (771)
Q Consensus 215 ~~~~l~~L~~L~Ls~N-~l~~~~p~~-~~~l~~l~~L~~L~Ls~N~l~~~~----p~~~~~l~~~L~~L~Ls~N~l~ 285 (771)
.+.+-+.|++|+|++| +|...--.. ...+..-+.|+.|+|++|.|...- -..+..- +.|+.|+|+.|.|.
T Consensus 36 ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N-~tL~~L~L~~N~Ig 111 (197)
T 1pgv_A 36 LREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETS-PSLRVLNVESNFLT 111 (197)
T ss_dssp HHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHC-SSCCEEECCSSBCC
T ss_pred HHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcC-CccCeEecCCCcCC
Confidence 3455677888888875 664210000 112344467788888888776322 2222222 25777777777776
No 440
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=95.83 E-value=0.016 Score=61.71 Aligned_cols=74 Identities=11% Similarity=0.149 Sum_probs=42.9
Q ss_pred ccccccccceEEEEEecCC--------CeEEEEEEeeccchhhHHHHHHHHHHHhccCCCC-ceeEEEEeecCCCCCcee
Q 041479 527 VSYESLVKATVYKGILDLD--------QTFIAVKVLFLHQRGALKSFMAECQALRNIRHRN-LVKIITACSTSDFQGNYF 597 (771)
Q Consensus 527 ~~l~~~~~~~Vy~~~~~~~--------~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~n-Iv~l~~~~~~~~~~~~~~ 597 (771)
..++.|....+|+.....+ ++.|++|+....... ..+...|.++++.+.... +.++++.. .+
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~-~~~~~~E~~~l~~L~~~g~~P~~~~~~--~~------ 109 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDE-LYNTISEFEVYKTMSKYKIAPQLLNTF--NG------ 109 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGG-TSCHHHHHHHHHHHHHTTSSCCEEEEE--TT------
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccc-eecHHHHHHHHHHHHhcCCCCceEEec--CC------
Confidence 3456777788999876542 247888887543221 123357888888775323 34666543 22
Q ss_pred EEEEEEeccCCCC
Q 041479 598 RALVYEFMHHGSL 610 (771)
Q Consensus 598 ~~lv~e~~~~g~L 610 (771)
++||||++|..+
T Consensus 110 -~~v~e~i~G~~l 121 (369)
T 3c5i_A 110 -GRIEEWLYGDPL 121 (369)
T ss_dssp -EEEEECCCSEEC
T ss_pred -cEEEEEecCCcC
Confidence 589999987554
No 441
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=95.73 E-value=0.045 Score=57.01 Aligned_cols=135 Identities=13% Similarity=0.063 Sum_probs=75.0
Q ss_pred cccceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCC--CceeEEEEeecCCC--CCceeEEEEEEeccC
Q 041479 532 LVKATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHR--NLVKIITACSTSDF--QGNYFRALVYEFMHH 607 (771)
Q Consensus 532 ~~~~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~--nIv~l~~~~~~~~~--~~~~~~~lv~e~~~~ 607 (771)
|....||+....++ +.+++|+..... ...+.+..|..+++.++.. .+.+++.. ++.. ......+++|||++|
T Consensus 36 g~~n~~y~v~~~~g-~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~~~g~~vp~~~~~--~g~~~~~~~g~~~~l~~~i~G 111 (328)
T 1zyl_A 36 SYENRVYQFQDEDR-RRFVVKFYRPER-WTADQILEEHQFALQLVNDEVPVAAPVAF--NGQTLLNHQGFYFAVFPSVGG 111 (328)
T ss_dssp CSSSEEEEECCTTC-CCEEEEEECTTT-SCHHHHHHHHHHHHHHHHTTCSBCCCCCB--TTBSCEEETTEEEEEEECCCC
T ss_pred CcccceEEEEcCCC-CEEEEEEcCCCC-CCHHHHHHHHHHHHHHHHcCCeecceeec--CCcEEEEECCEEEEEEEecCC
Confidence 66678998765444 478999986332 1235667788887777421 23444332 1110 001145789999988
Q ss_pred CCCCCC-------------------c-------ccCCHHHH----HHH---------------HHHHHHHHHHHHhc---
Q 041479 608 GSLESC-------------------P-------RILSFLRR----LNI---------------AIDVASALEYLHHH--- 639 (771)
Q Consensus 608 g~L~~~-------------------~-------~~l~~~~~----~~i---------------~~~ia~gL~~LH~~--- 639 (771)
..+... . ..+++... ..+ ...+...++.+...
T Consensus 112 ~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 191 (328)
T 1zyl_A 112 RQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWRE 191 (328)
T ss_dssp EECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCCS
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 655321 0 01121110 000 01111223333321
Q ss_pred -CCCCeEecCCCCCCeeeCCCCceEEecccCccc
Q 041479 640 -CKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRF 672 (771)
Q Consensus 640 -~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~ 672 (771)
....++|+|+++.||+++ + .+.++||+.+..
T Consensus 192 ~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 192 DFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp CSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred cCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 234689999999999999 4 899999988763
No 442
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=95.67 E-value=0.029 Score=58.75 Aligned_cols=32 Identities=22% Similarity=0.282 Sum_probs=27.3
Q ss_pred CCCeEecCCCCCCeeeCCC----CceEEecccCccc
Q 041479 641 KKPIVHCDLKPSNVLLDND----MTAHMGDFGLTRF 672 (771)
Q Consensus 641 ~~~ivHrdlk~~NILl~~~----~~~kl~DfGla~~ 672 (771)
...++|+|+.+.||+++.+ +.+.|+||+.+..
T Consensus 182 ~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 182 DMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred CCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 3579999999999999874 6799999998864
No 443
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=94.40 E-value=0.21 Score=52.30 Aligned_cols=31 Identities=23% Similarity=0.366 Sum_probs=27.4
Q ss_pred CCeEecCCCCCCeeeCCCCceEEecccCccc
Q 041479 642 KPIVHCDLKPSNVLLDNDMTAHMGDFGLTRF 672 (771)
Q Consensus 642 ~~ivHrdlk~~NILl~~~~~~kl~DfGla~~ 672 (771)
..++|+|+.+.||+++.++.+.++||+.+..
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 4699999999999999878899999987764
No 444
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=93.91 E-value=0.1 Score=55.79 Aligned_cols=47 Identities=21% Similarity=0.234 Sum_probs=35.4
Q ss_pred CCeEecCCCCCCeeeCCC------CceEEecccCccccCcccCCcccccccccccccccchhHHHHHHHHHh
Q 041479 642 KPIVHCDLKPSNVLLDND------MTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPEYGILLLEIFT 707 (771)
Q Consensus 642 ~~ivHrdlk~~NILl~~~------~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~Gv~l~el~t 707 (771)
..++|+|+.+.||+++.+ +.+.++||..|. .++.+=++|..+.|.+.
T Consensus 244 ~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~-------------------~~~~~~Dla~~~~e~~~ 296 (401)
T 3f2s_A 244 VVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS-------------------YNYRGFDIGNHFCEWMY 296 (401)
T ss_dssp EEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCE-------------------EEEHHHHHHHHHHHTTE
T ss_pred eeEEeccCCcccEEEcCCcccCcccceEEEeeccCC-------------------cCChHHHHHHHHHHHHh
Confidence 368999999999999876 789999998664 12333357777777764
No 445
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=91.91 E-value=0.31 Score=46.73 Aligned_cols=116 Identities=10% Similarity=0.133 Sum_probs=82.2
Q ss_pred cCCCCceeEEEEeecCCCCCceeEEEEEEeccCCCCCCC--cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCC
Q 041479 575 IRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESC--PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPS 652 (771)
Q Consensus 575 l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~--~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~ 652 (771)
-.||+.++. .+-.+.+ . +++.|-...+...+ .+.++...+++++..++...++++. =+|--+.|+
T Consensus 42 ~~~~~Fl~~-~I~e~eD-----~--v~~~y~~~~~~~~f~~ik~~~~~eKlr~l~ni~~l~~~~~~-----r~tf~L~P~ 108 (215)
T 4ann_A 42 QHSPYFIDA-ELTELRD-----S--FQIHYDINDNHTPFDNIKSFTKNEKLRYLLNIKNLEEVNRT-----RYTFVLAPD 108 (215)
T ss_dssp SCCTTBCCE-EEEECSS-----E--EEEEECCCTTSEEGGGGGGSCHHHHHHHHHHGGGGGGGGGS-----SEECCCSGG
T ss_pred ccCCcccce-EEEEccc-----E--EEEEEEcCcccCCHHHHHhcCHHHHHHHHHHHHHHHHHhcC-----ceEEEEecc
Confidence 468998876 4444444 2 55555555555444 5668889999999999987766664 367789999
Q ss_pred CeeeCCCCceEEecccCccccCcccCCcccccccccccccccchh-----HHHHHHHHHhCCCCCCccccCC
Q 041479 653 NVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE-----YGILLLEIFTGKRPTSDMFTEG 719 (771)
Q Consensus 653 NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE-----~Gv~l~el~tg~~P~~~~~~~~ 719 (771)
||+++.++.+++.-.|+...+.+.. +.+| |=+++..+++++..|++.+..+
T Consensus 109 NL~f~~~~~p~i~~RGik~~l~P~~----------------~~ee~fL~qyKAliiall~~K~~Fe~l~~G~ 164 (215)
T 4ann_A 109 ELFFTRDGLPIAKTRGLQNVVDPLP----------------VSEAEFLTRYKALVICAFNEKQSFDALVEGN 164 (215)
T ss_dssp GEEECTTSCEEESCCEETTTBSCCC----------------CCHHHHHHHHHHHHHHHHCTTCCHHHHHHSC
T ss_pred eEEEcCCCCEEEEEccCccCCCCCC----------------CCHHHHHHHHHHHHHHHHcCCCCHHHHHcCh
Confidence 9999999999999888754333211 1223 6888999999999987654433
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=91.72 E-value=0.14 Score=55.38 Aligned_cols=73 Identities=14% Similarity=0.103 Sum_probs=44.6
Q ss_pred cccccccceEEEEEecCC-------CeEEEEEEeeccchhhHHHHHHHHHHHhccC-CCCceeEEEEeecCCCCCceeEE
Q 041479 528 SYESLVKATVYKGILDLD-------QTFIAVKVLFLHQRGALKSFMAECQALRNIR-HRNLVKIITACSTSDFQGNYFRA 599 (771)
Q Consensus 528 ~l~~~~~~~Vy~~~~~~~-------~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~~~~~~ 599 (771)
.+..|....+|+.....+ ++.|++|+....... .-+-.+|.++++.+. +.-..++++.+ .+ +
T Consensus 77 ~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~-~idR~~E~~~l~~L~~~gi~P~l~~~~--~~-------~ 146 (424)
T 3mes_A 77 QIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGK-FYDSKVELDVFRYLSNINIAPNIIADF--PE-------G 146 (424)
T ss_dssp EECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-C-CCCHHHHHHHHHHHHHTTSSCCEEEEE--TT-------E
T ss_pred EcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcch-hcCHHHHHHHHHHHHhcCCCCCEEEEc--CC-------C
Confidence 455677778999887631 357888886433211 123356888887774 32234555432 22 6
Q ss_pred EEEEeccCCCC
Q 041479 600 LVYEFMHHGSL 610 (771)
Q Consensus 600 lv~e~~~~g~L 610 (771)
+||||++|..+
T Consensus 147 ~I~efI~G~~l 157 (424)
T 3mes_A 147 RIEEFIDGEPL 157 (424)
T ss_dssp EEEECCCSEEC
T ss_pred EEEEEeCCccC
Confidence 89999998665
No 447
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=89.95 E-value=0.96 Score=48.39 Aligned_cols=45 Identities=22% Similarity=0.307 Sum_probs=33.5
Q ss_pred eEecCCCCCCeee------CCCCceEEecccCccccCcccCCcccccccccccccccchhHHHHHHHHHh
Q 041479 644 IVHCDLKPSNVLL------DNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPEYGILLLEIFT 707 (771)
Q Consensus 644 ivHrdlk~~NILl------~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE~Gv~l~el~t 707 (771)
++|+|+.+.||++ +++..++++||-.|. ++|.+-++|..+.|.+.
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~-------------------~n~~~fDlan~f~ew~~ 296 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSS-------------------YNYRGFDIGNHFCEWMY 296 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCE-------------------EEEHHHHHHHHHHHTTE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhcc-------------------CCCchHhHHHHHHHHhc
Confidence 5799999999999 446679999998664 33444467777777653
No 448
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=81.90 E-value=3 Score=40.04 Aligned_cols=111 Identities=14% Similarity=0.120 Sum_probs=74.0
Q ss_pred cCCCCceeEEEEeecCCCCCceeEEEEEEeccCCCCCCC--cccCCHHHHHHHHHHHHHHHH-HHHhcCCCCeEecCCCC
Q 041479 575 IRHRNLVKIITACSTSDFQGNYFRALVYEFMHHGSLESC--PRILSFLRRLNIAIDVASALE-YLHHHCKKPIVHCDLKP 651 (771)
Q Consensus 575 l~H~nIv~l~~~~~~~~~~~~~~~~lv~e~~~~g~L~~~--~~~l~~~~~~~i~~~ia~gL~-~LH~~~~~~ivHrdlk~ 651 (771)
-.||.. + ..+-.+.+ . +.+.|-.......+ .+.++..++++++..++.... +++. -+|--+.|
T Consensus 47 ~~~~~f-~-~~I~~~eD-----~--~~i~y~~~~~~~~f~~i~~~~~~eKlrll~nl~~L~~~~~~~-----r~tf~l~P 112 (219)
T 4ano_A 47 EVDPCI-V-RDIDVSED-----E--VKVVIKPPSSFLTFAAIRKTTLLSRIRAAIHLVSKVKHHSAR-----RLIFIVCP 112 (219)
T ss_dssp GSCSSS-E-EEEEECSS-----E--EEEEEECCTTCEEHHHHHTSCHHHHHHHHHHHHHHHSSCCSS-----SEECCCCG
T ss_pred ccCCCC-C-eEEEEeCC-----E--EEEEEEcCcccCcHHHHHhcCHHHHHHHHHHHHHHHHHhhhC-----ceeEEEeC
Confidence 368887 3 23333443 3 44555444344333 456788889999888887666 5553 46778899
Q ss_pred CCeeeCCCCceEEecccCccccCcccCCcccccccccccccccchh-----HHHHHHHHHhCCCCCCcc
Q 041479 652 SNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGYATPE-----YGILLLEIFTGKRPTSDM 715 (771)
Q Consensus 652 ~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y~aPE-----~Gv~l~el~tg~~P~~~~ 715 (771)
+||+++.++.+++.-.|+-..+++.. +.+| |=+++..++.++..|++.
T Consensus 113 ~NL~f~~~~~p~i~hRGi~~~lpP~e----------------~~ee~fl~qyKali~all~~K~~Fe~l 165 (219)
T 4ano_A 113 ENLMFNRALEPFFLHVGVKESLPPDE----------------WDDERLLREVKATVLALTEGEYRFDEY 165 (219)
T ss_dssp GGEEECTTCCEEESCCEETTTBSSCS----------------CCHHHHHHHHHHHHHHHTTCSSCHHHH
T ss_pred ceEEEeCCCcEEEEEcCCcccCCCCC----------------CCHHHHHHHHHHHHHHHHcCCCCHHHH
Confidence 99999999999999888754332211 2333 678888889988887653
No 449
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=76.15 E-value=0.26 Score=53.92 Aligned_cols=56 Identities=11% Similarity=-0.078 Sum_probs=14.7
Q ss_pred cceEEEEEecCCCeEEEE------EEeeccc--hhhHHHHHHHHHHHhccCCCCceeEEEEeec
Q 041479 534 KATVYKGILDLDQTFIAV------KVLFLHQ--RGALKSFMAECQALRNIRHRNLVKIITACST 589 (771)
Q Consensus 534 ~~~Vy~~~~~~~~~~vAv------K~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~ 589 (771)
+|.||+|.+.....+||| |....+. .+....|.+|..+++..+|||+++.+++...
T Consensus 152 fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 152 YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence 999999999765568999 7664332 2334678999999999999999999887643
No 450
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=71.99 E-value=3.5 Score=28.27 Aligned_cols=8 Identities=25% Similarity=0.210 Sum_probs=3.1
Q ss_pred HHHHhhhc
Q 041479 501 LIINRLRR 508 (771)
Q Consensus 501 ~~~~r~~~ 508 (771)
+++.|+|+
T Consensus 32 ~~~~RRr~ 39 (44)
T 2ks1_B 32 GLFMRRRH 39 (44)
T ss_dssp HHHHHTTT
T ss_pred HHHhhhhH
Confidence 33334333
No 451
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=68.42 E-value=3.7 Score=28.12 Aligned_cols=9 Identities=11% Similarity=0.080 Sum_probs=3.6
Q ss_pred HHHHhhhcc
Q 041479 501 LIINRLRRQ 509 (771)
Q Consensus 501 ~~~~r~~~~ 509 (771)
+++.|+|++
T Consensus 31 ~~~~RRRr~ 39 (44)
T 2l2t_A 31 AVYVRRKSI 39 (44)
T ss_dssp HHHHHTTCS
T ss_pred HHHhhhhhh
Confidence 334444433
No 452
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=59.41 E-value=6.9 Score=26.74 Aligned_cols=9 Identities=33% Similarity=0.335 Sum_probs=3.8
Q ss_pred HHHHhhhcc
Q 041479 501 LIINRLRRQ 509 (771)
Q Consensus 501 ~~~~r~~~~ 509 (771)
+++.|+|++
T Consensus 32 ~~~~RRR~~ 40 (44)
T 2jwa_A 32 GILIKRRQQ 40 (44)
T ss_dssp HHHHHHHCS
T ss_pred Hhheehhhh
Confidence 344444443
No 453
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=55.20 E-value=59 Score=31.08 Aligned_cols=136 Identities=7% Similarity=-0.006 Sum_probs=70.5
Q ss_pred cccCCHHHHHHHHHHHHHHHHHHHhcCCCCeEecCCCCCCeeeCCCCceEEecccCccccCcccCCcccccccccccccc
Q 041479 614 PRILSFLRRLNIAIDVASALEYLHHHCKKPIVHCDLKPSNVLLDNDMTAHMGDFGLTRFIPEVMSSNQCSSVGLKGTVGY 693 (771)
Q Consensus 614 ~~~l~~~~~~~i~~~ia~gL~~LH~~~~~~ivHrdlk~~NILl~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~gt~~y 693 (771)
..++++.+++.++.|.+.+|.-+-... .+ ..+=.-|..|++..+|.+...+ +.+.. . ...+
T Consensus 43 ~~PlsEEqaWALc~Qc~~~L~~~~~~~-~~-~~~i~~~~~i~l~~dG~V~f~~-~~s~~--~--------------~~~~ 103 (229)
T 2yle_A 43 NQPINEEQAWAVCYQCCGSLRAAARRR-QP-RHRVRSAAQIRVWRDGAVTLAP-AADDA--G--------------EPPP 103 (229)
T ss_dssp TSCCCHHHHHHHHHHHHHHHHHHHHTT-CC-CCCCCSGGGEEEETTSCEEECC-C-------------------------
T ss_pred CCCcCHHHHHHHHHHHHHHHHhhhhcc-cC-CceecCCcceEEecCCceeccc-ccccc--c--------------ccCC
Confidence 678999999999999999887662110 01 1222346889999999888764 22110 0 0012
Q ss_pred cchh--------------HHHHHHHHHhCCCCCCccccCCccHHHHHHhhCCC-chhhhcCccccccCcccC----hhch
Q 041479 694 ATPE--------------YGILLLEIFTGKRPTSDMFTEGLDLHNFVKMALPD-QILQVLDPLFLVGGVQEG----EETA 754 (771)
Q Consensus 694 ~aPE--------------~Gv~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~cl----~~~p 754 (771)
.||| +|+++|..+--..|-.........+-.....+... .-....|..+......=+ ...+
T Consensus 104 ~~pe~~~~~~te~~~IysLG~tLY~ALDygL~e~eE~eLS~~LE~LL~~Mt~~~~d~~~~DeG~~~~~eg~~d~~~~~~~ 183 (229)
T 2yle_A 104 VAGKLGYSQCMETEVIESLGIIIYKALDYGLKENEERELSPPLEQLIDHMANTVEADGSNDEGYEAAEEGLGDEDEKRKI 183 (229)
T ss_dssp ---CCSSSSSCHHHHHHHHHHHHHHHHTTTCCTTEEECCCHHHHHHHHHHTTCCC--------------------CCSCC
T ss_pred CChhhccccchHHHHHHHHHHHHHHHhhcCCCcccchhhCHHHHHHHHHHHhcccccccccccccccccccccccccccc
Confidence 2333 79999999885455444334444565555555432 111233333321000000 2346
Q ss_pred hhcCCHHHHHHHHH
Q 041479 755 EENIKKGQIRESLI 768 (771)
Q Consensus 755 ~~Rpt~~~vl~~L~ 768 (771)
..|++.++|++.-.
T Consensus 184 ~~~~sl~~Vi~~C~ 197 (229)
T 2yle_A 184 SAIRSYRDVMKLCA 197 (229)
T ss_dssp CCCCSHHHHHHHHH
T ss_pred cCcCCHHHHHHHHH
Confidence 77888888887644
No 454
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=51.95 E-value=17 Score=29.96 Aligned_cols=50 Identities=18% Similarity=0.249 Sum_probs=38.7
Q ss_pred CCCCcccCCccccCCCCCcEEEcCCCcccccCCccccCCCCCCEEecccCc
Q 041479 53 GQNLTGTASPYIGNLTFLRLINLQQNNFSSNIPHEIGRLFRLRHIIFNSNA 103 (771)
Q Consensus 53 ~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 103 (771)
+..++.+...+|.++++|+.+.+-.+ ++.+-..+|.++++|+.+.+....
T Consensus 5 g~~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~~ 54 (100)
T 2lz0_A 5 GEPVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGED 54 (100)
T ss_dssp CCCCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCSC
T ss_pred CCccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCCC
Confidence 34567677788999999999998875 555667789999999988887654
No 455
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=30.06 E-value=83 Score=25.64 Aligned_cols=46 Identities=13% Similarity=-0.029 Sum_probs=24.0
Q ss_pred cCcccCcccccccCCcceEecCCccceeccCccccCCCCCCEEEccC
Q 041479 283 PISGSIPTEIGNLKNLIIIAIEKFILIRNIPISVGYLLKLQVLSLFE 329 (771)
Q Consensus 283 ~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~p~~~~~l~~L~~L~Ls~ 329 (771)
.++.+-..+|.++++|+.+.+..+ +...-..+|.++.+|+.+.+..
T Consensus 7 ~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~ 52 (100)
T 2lz0_A 7 PVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTG 52 (100)
T ss_dssp CCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECC
T ss_pred ccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcC
Confidence 344344456666666666666542 2233334555555555555543
No 456
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=20.74 E-value=3.3e+02 Score=27.65 Aligned_cols=131 Identities=12% Similarity=0.060 Sum_probs=67.9
Q ss_pred ceEEEEEecCCCeEEEEEEeeccchhhHHHHHHHHHHHhccCCCCceeEEEEeec------------CCCC------Cce
Q 041479 535 ATVYKGILDLDQTFIAVKVLFLHQRGALKSFMAECQALRNIRHRNLVKIITACST------------SDFQ------GNY 596 (771)
Q Consensus 535 ~~Vy~~~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~------------~~~~------~~~ 596 (771)
+.||.+.- ++ ..|+||-.. .-..+-+..++...=.+.-|+. +++.+... .... ...
T Consensus 82 tgvff~~t-d~-~~~VVK~s~---~l~~E~l~s~LA~~LGlpiP~~-Riv~~~~~E~~e~~~~L~~~~~~~~~l~~l~~~ 155 (342)
T 1cja_A 82 EGLFFVET-ES-GVFIVKRST---NIESETFCSLLCMRLGLHAPKV-RVVSSNSEEGTNMLECLAAIDKSFRVITTLANQ 155 (342)
T ss_dssp SCEEEEEE-SS-CEEEEECCT---THHHHHHHHHHHHHHTCCCCCE-EEEESSSHHHHHHHHHHHHHCSSSCHHHHHTTC
T ss_pred CCeEEEEe-CC-CEEEEeCcH---HHHHHHHHHHHHHHhCCCCCCe-eEEeeCcHHHHHHHHHHHHhhhhhHHHHHhhcc
Confidence 44555544 34 488999552 2234556666666666677763 33332200 0000 001
Q ss_pred eEEEEEEeccCCCCCCCcccCCHHHH--HHHHHHH--HHHHHHHHhcC-CCCeEe-cCCCCCCeeeCCCC-ceEEecccC
Q 041479 597 FRALVYEFMHHGSLESCPRILSFLRR--LNIAIDV--ASALEYLHHHC-KKPIVH-CDLKPSNVLLDNDM-TAHMGDFGL 669 (771)
Q Consensus 597 ~~~lv~e~~~~g~L~~~~~~l~~~~~--~~i~~~i--a~gL~~LH~~~-~~~ivH-rdlk~~NILl~~~~-~~kl~DfGl 669 (771)
..+++|||.+|..|....... +.+. .+...++ .-++++..... +-+.+. .-=.+.|||++.++ .+.++|-++
T Consensus 156 ~~~l~meyv~G~~L~e~~~~~-~~~~f~~~~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n~~~~~IDhn~ 234 (342)
T 1cja_A 156 ANILLMELVRGITLNKLTTTS-APEVLTKSTMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGATVVPIDSKI 234 (342)
T ss_dssp SEEEEEECCCEEESTTCCSSS-HHHHSCHHHHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTTCEEECSCCC
T ss_pred cceehhhhcCCCccccchhhh-hhhhcCHHHHHhhchhheehhhhcCCccCcccccCCCChhheEEeCCCCeEEEEcCCc
Confidence 346999999977765542211 1111 1222222 23455555442 223222 22568899997654 588999999
Q ss_pred ccc
Q 041479 670 TRF 672 (771)
Q Consensus 670 a~~ 672 (771)
+..
T Consensus 235 af~ 237 (342)
T 1cja_A 235 IPL 237 (342)
T ss_dssp CCC
T ss_pred ccc
Confidence 864
Done!