BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041485
(179 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8LGG8|USPAL_ARATH Universal stress protein A-like protein OS=Arabidopsis thaliana
GN=At3g01520 PE=1 SV=2
Length = 175
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 79/161 (49%), Gaps = 11/161 (6%)
Query: 14 MASNNRSIGVALDFSKGSKLALKWAIDNLLEKGDT---LYIIHIKLPQGDESRNLLWSDT 70
+A N +I + S K A +W ++ ++ + + ++H+++ D + D
Sbjct: 10 VAVNASTIKDYPNPSISCKRAFEWTLEKIVRSNTSDFKILLLHVQVVDEDG-----FDDV 64
Query: 71 GSPLIPLEEFRDQEVMKQYEVDLDQDVLDMLDAASKQKHVSVVAKLYWGDARDKLCEAVE 130
S E+FRD M+Q +L+ + V A + GD +D +C+ V+
Sbjct: 65 DSIYASPEDFRD---MRQSNKAKGLHLLEFFVNKCHEIGVGCEAWIKTGDPKDVICQEVK 121
Query: 131 AMKLDSLVMGSRGLGTIQRVLLGSVSNHVLANASCPVTIVK 171
++ D LV+GSRGLG Q+V +G+VS + +A CPV +K
Sbjct: 122 RVRPDFLVVGSRGLGRFQKVFVGTVSAFCVKHAECPVMTIK 162
>sp|Q57951|Y531_METJA Universal stress protein MJ0531 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0531 PE=3 SV=1
Length = 170
Score = 57.0 bits (136), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 55/102 (53%)
Query: 72 SPLIPLEEFRDQEVMKQYEVDLDQDVLDMLDAASKQKHVSVVAKLYWGDARDKLCEAVEA 131
SP + L E++ + + Q+ L + +++ V + ++ G +++ E E
Sbjct: 66 SPFVGLPAEGSWELISELLKEEGQEALKKVKKMAEEWGVKIHTEMLEGVPANEIVEFAEK 125
Query: 132 MKLDSLVMGSRGLGTIQRVLLGSVSNHVLANASCPVTIVKDP 173
K D +VMG+ G ++R+LLGSV+ V+ NA CPV +VK P
Sbjct: 126 KKADLIVMGTTGKTGLERILLGSVAERVIKNAHCPVLVVKKP 167
>sp|P74897|YQA3_THEAQ Universal stress protein in QAH/OAS sulfhydrylase 3'region
OS=Thermus aquaticus PE=3 SV=1
Length = 137
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 34/58 (58%)
Query: 114 AKLYWGDARDKLCEAVEAMKLDSLVMGSRGLGTIQRVLLGSVSNHVLANASCPVTIVK 171
A L G + + +A K D +VMG+RGLG + + LGS S V+A A CPV +V+
Sbjct: 80 ALLLQGRPAEAILQAAIGEKADLIVMGTRGLGAVGSLFLGSQSQKVVAEAPCPVLLVR 137
>sp|P87132|YFK5_SCHPO Uncharacterized protein C167.05 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC167.05 PE=1 SV=2
Length = 601
Score = 47.0 bits (110), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 73/152 (48%), Gaps = 20/152 (13%)
Query: 23 VALDFSKGSKLALKWAIDNLLEKGDTLYIIHI---KLPQGDESRNLLWSDTGSPLIPLEE 79
+ LD S S A +WA+ LL GDTL I+ + P ++ + S E+
Sbjct: 435 LTLDLSSESLHAAEWAVGILLRNGDTLIIVDVIECDDPSARAVKDRMES---------EQ 485
Query: 80 FRDQEVMKQYEVDLDQDVLDMLDAASKQKHVSVVAKLYWGDARDKLCEAVEAMKLDSLVM 139
E + +Y +L +L + V++ ++ A+ + E ++ ++ +VM
Sbjct: 486 LETLEKITKY-------ILKLLSKTVLEVEVNIEV-IHHEKAKHLIIEMIDYIEPSLVVM 537
Query: 140 GSRGLGTIQRVLLGSVSNHVLANASCPVTIVK 171
GSRG ++ VLLGS SN+++ +S PV + +
Sbjct: 538 GSRGRSHLKGVLLGSFSNYLVNKSSVPVMVAR 569
>sp|P42297|YXIE_BACSU Universal stress protein YxiE OS=Bacillus subtilis (strain 168)
GN=yxiE PE=3 SV=1
Length = 148
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 76/152 (50%), Gaps = 13/152 (8%)
Query: 23 VALDFSKGSKLALKWAIDNLLEKGDTLYIIHIKLPQGDESRNLLWSDTGSPLIPLEEFRD 82
VA+D S S AL A+ E+ L I+H+ G E+ S TG +P E F D
Sbjct: 7 VAIDGSDMSAKALDAAVHLAKEQQAELSILHV----GREAVVTTSSLTGIVYVP-EHFID 61
Query: 83 QEVMKQYEVDLDQDVLDMLD-AASKQKHVSVVAKLYW--GDARDKLCEAVEAMKLDSLVM 139
+ ++ ++ L +L+ A K V A+ + G+ ++ + + +V+
Sbjct: 62 E-----IRNEVKKEGLKILENAKEKAAEKGVQAETIYANGEPAHEILNHAKEKGVSLIVV 116
Query: 140 GSRGLGTIQRVLLGSVSNHVLANASCPVTIVK 171
GSRG+ ++ ++LGSVS+ V ++CPV IV+
Sbjct: 117 GSRGISGLKEMMLGSVSHKVSQLSTCPVLIVR 148
>sp|P72745|Y1101_SYNY3 Universal stress protein Slr1101 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=slr1101 PE=3 SV=1
Length = 108
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 84 EVMKQYEVDLDQDVLDMLDAASKQK---HVSVVAKLYWGDARDKLCEAVEAMKLDSLVMG 140
EV +Q +Q+ LD L+ +Q + A+ G +C+ + D +V+G
Sbjct: 15 EVWQQQWQTFEQEGLDTLEKRRQQALALDIECQAEQILGSPGKIICQRAKQDNSDIIVVG 74
Query: 141 SRGLGTIQRVLLGSVSNHVLANASCPVTIVKDP 173
RG + +LLGSV N+V +A C V +V P
Sbjct: 75 HRGRWGLSEILLGSVGNYVFHHAHCCVFVVPTP 107
>sp|O74782|YGBA_SCHPO Universal stress protein A family protein C25B2.10
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC25B2.10 PE=1 SV=1
Length = 307
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 72/163 (44%), Gaps = 21/163 (12%)
Query: 12 FKMASNNRSIGVALDFSKGSKLALKWAIDNLLEKGDTLYIIHIKLPQGDESRNLLWSDTG 71
+K +R+ +D + S++A+ W + LL D ++ + D S L
Sbjct: 133 YKWTRTSRTFLCGMDGNSYSEVAVDWLFETLLADNDEAVVLRVI----DPSSKLA----- 183
Query: 72 SPLIPLEEFRDQEVMKQYEVDLDQDVLDMLDAASKQKHVSVVAKLYWGDARDKLCEAVEA 131
E+ D++ + + +L +D K VS++ +L G +D + +
Sbjct: 184 ------EDLSDEQSYRSLAEHIMAGILKKVD---DDKAVSIIVELVVGKPQDMILRTIHV 234
Query: 132 MKLDSLVMGSRG--LGTIQRVL-LGSVSNHVLANASCPVTIVK 171
DSL++G+RG L + Q +L GSVS L + PV +V+
Sbjct: 235 YSPDSLIVGTRGKALNSFQSLLSSGSVSKFCLQKSPIPVIVVR 277
>sp|O53472|Y2026_MYCTU Universal stress protein Rv2026c/MT2085 OS=Mycobacterium
tuberculosis GN=Rv2026c PE=2 SV=1
Length = 294
Score = 43.9 bits (102), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 86 MKQYEVDLDQDVLD-----MLDAASKQKHVSVVAKLYWGDARDKLCEAVEAMKLDSLVMG 140
M +++ D Q V++ + ++ + K V +L + + L +A + L +V+G
Sbjct: 60 MTEWQKDNAQQVIEQAREALTNSLGESKPPQVHTELVFSNVVPTLIDASQQAWL--MVVG 117
Query: 141 SRGLGTIQRVLLGSVSNHVLANASCPVTIVKDPSAA 176
S+G+G + R+LLGS+S +L +A CPV I+ + A
Sbjct: 118 SQGMGALGRLLLGSISTALLHHARCPVAIIHSGNGA 153
Score = 30.4 bits (67), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 65/156 (41%), Gaps = 33/156 (21%)
Query: 23 VALDFSKGSKLALKWAIDNLLEKGDTLYIIHIKLPQGDESRNLLWSDTGS-PLIPLE--- 78
V +D S S+ A A D + L +H W+D G P++ ++
Sbjct: 163 VGIDGSPASEAATALAFDEASRRRVDLVALHA------------WTDLGMFPVLGMDWRE 210
Query: 79 -EFRDQEVMKQYEVDLDQDVLDMLDAASKQKHVSVVA--KLYWGDARDKLCEAVEAMKLD 135
E R+ EV+ + + D+ + H S+V W L E E +L
Sbjct: 211 REKREAEVLAERLAGWQEQYPDV------RVHRSLVCDKPARW------LLEHSEQAQL- 257
Query: 136 SLVMGSRGLGTIQRVLLGSVSNHVLANASCPVTIVK 171
+V+GS G G +LLGSVS+ V + PV +V+
Sbjct: 258 -VVVGSHGRGGFSGMLLGSVSSAVAHSVRIPVIVVR 292
>sp|O06189|Y2623_MYCTU Universal stress protein Rv2623/MT2698 OS=Mycobacterium
tuberculosis GN=Rv2623 PE=1 SV=1
Length = 297
Score = 42.4 bits (98), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 81/164 (49%), Gaps = 20/164 (12%)
Query: 14 MASNNRSIG--VALDFSKGSKLALKWAIDNLLEKGDTLYIIHIKLPQGDESRNLLWSDTG 71
M+S N S+G V +D S +++A++WA + + L ++H P+ W +
Sbjct: 1 MSSGNSSLGIIVGIDDSPAAQVAVRWAARDAELRKIPLTLVHAVSPE-----VATWLEV- 54
Query: 72 SPLIPLEEFRDQEVMKQYEVDLDQDVLDMLDAAS-KQKHVSVVAKLYWGDARDKLCEAVE 130
PL P R Q+ ++ +D D L +++ AS + +V +++ A L +
Sbjct: 55 -PL-PPGVLRWQQDHGRHLID---DALKVVEQASLRAGPPTVHSEIVPAAAVPTLVD--- 106
Query: 131 AMKLDSLVM--GSRGLGTIQRVLLGSVSNHVLANASCPVTIVKD 172
M D+++M G G G LLGSVS+ +L +A CPV I+ D
Sbjct: 107 -MSKDAVLMVVGCLGSGRWPGRLLGSVSSGLLRHAHCPVVIIHD 149
>sp|Q57997|Y577_METJA Universal stress protein MJ0577 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ0577 PE=1 SV=1
Length = 162
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 80/160 (50%), Gaps = 20/160 (12%)
Query: 26 DFSKGSKLALKWAIDNLLEKGDTLYIIHIKLPQGDESRNLLWSDTGSPLI-------PLE 78
DFS+ +++ALK K + + ++H+ + R + D S L+ +E
Sbjct: 13 DFSETAEIALKHVKAFKTLKAEEVILLHV-----IDEREIKKRDIFSLLLGVAGLNKSVE 67
Query: 79 EFRDQ---EVMKQYEVDLDQDVLDMLDAASKQKHVSVVAKLYWGDARDKLCEAVEAMKLD 135
EF ++ ++ ++ + ++ ++ D K K + VV G +++ + E +D
Sbjct: 68 EFENELKNKLTEEAKNKMENIKKELEDVGFKVKDIIVV-----GIPHEEIVKIAEDEGVD 122
Query: 136 SLVMGSRGLGTIQRVLLGSVSNHVLANASCPVTIVKDPSA 175
++MGS G ++ +LLGSV+ +V+ ++ PV +VK ++
Sbjct: 123 IIIMGSHGKTNLKEILLGSVTENVIKKSNKPVLVVKRKNS 162
>sp|A0QZA1|Y3950_MYCS2 Universal stress protein MSMEG_3950/MSMEI_3859 OS=Mycobacterium
smegmatis (strain ATCC 700084 / mc(2)155) GN=MSMEG_3950
PE=1 SV=1
Length = 294
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 13/164 (7%)
Query: 15 ASNNRSIGVALDFSKGSKLALKWAIDNLLEKGDTLYIIHIKLPQGDESRNLLWSDTGSPL 74
++ I V +D S S A++WA + ++H+ P ++ S P
Sbjct: 4 SATEYGILVGVDSSAESDAAVRWAAREASLHDAPITLMHVIAP-------VVVSWPAGPY 56
Query: 75 IPLEEFRDQEVMKQYEVDLDQDVLDMLDAASKQKHVSVVAKLYWGDARDKLCEAVEAMKL 134
+ QE ++ ++ Q V+ D + ++V ++ L +A ++ ++
Sbjct: 57 M-ATVLECQEENARHAIEQAQKVV--ADCLGETHGLTVQTEIRKESVARTLIDASKSAQM 113
Query: 135 DSLVMGSRGLGTIQRVLLGSVSNHVLANASCPVTIVK-DPSAAH 177
+V+G+RG+G + RVLLGS S +L AS PV +V D AAH
Sbjct: 114 --VVVGNRGMGALGRVLLGSTSTSLLHYASGPVVVVHGDDQAAH 155
Score = 37.4 bits (85), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 61/151 (40%), Gaps = 23/151 (15%)
Query: 23 VALDFSKGSKLALKWAIDNLLEKGDTLYIIHIKLPQGDESRNLLWSDTG--SPLIPLEEF 80
+ +D S S++A A D +G L +H+ W D G P+ P E
Sbjct: 163 LGIDGSPASEVATSHAFDEASRRGVDLVALHV------------WIDVGDIPPIGPTWE- 209
Query: 81 RDQEVMKQYEVDLDQDVLDMLDAASKQKHVSVVAKLYWGDARDKLCEAVEAMKLDSLVMG 140
+E + + + + V YW L E EA + +V+G
Sbjct: 210 EQEETGRALLAERLAGWQERYPDVKVHRRVERAQPAYW------LLE--EAKQAQLVVVG 261
Query: 141 SRGLGTIQRVLLGSVSNHVLANASCPVTIVK 171
S G G +LLGSVS+ V +A+ PV +V+
Sbjct: 262 SHGRGGFTGMLLGSVSSRVAQSATTPVMVVR 292
>sp|O07552|NHAX_BACSU Stress response protein NhaX OS=Bacillus subtilis (strain 168)
GN=nhaX PE=2 SV=2
Length = 166
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 71/172 (41%), Gaps = 33/172 (19%)
Query: 21 IGVALDFSKGSKLALKWAID------------NLLEKGDTLYIIHIKLPQGDES------ 62
I VA D S+ SK AL AID + + D +I P + S
Sbjct: 7 IIVAFDGSENSKKALLTAIDLAKTVNAAITVAHSHDMKDNQTVIDPPRPAAEASYISGGM 66
Query: 63 ---RNLLWSDTGSPLIPLEEFRDQEVMKQYEVDLDQDVLDMLDAASKQKHVSVVAKLYWG 119
+ L SD SP + E R +EV+ + + ML+ + ++ G
Sbjct: 67 TSVPDPLISDVTSPEPMIYEDRTEEVIAEARM--------MLNEQQADGDIDIL----EG 114
Query: 120 DARDKLCEAVEAMKLDSLVMGSRGLGTIQRVLLGSVSNHVLANASCPVTIVK 171
D + + E + D +V GSR +++++ GSVS + A + PV IVK
Sbjct: 115 DPAESIIEHANRISADMIVTGSRDQNRLKKLIFGSVSEKLSAKSDIPVLIVK 166
>sp|P0A5F8|Y2019_MYCBO Universal stress protein Mb2019 OS=Mycobacterium bovis (strain ATCC
BAA-935 / AF2122/97) GN=Mb2019 PE=3 SV=1
Length = 317
Score = 38.9 bits (89), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 71/162 (43%), Gaps = 17/162 (10%)
Query: 17 NNRSIGVALDFSKGSKLALKWAIDNLLEKGDTLYIIHIKLP--QGDESRNLLWSDTGSPL 74
N I V +D S S A++WA + + L ++ + P E +S
Sbjct: 6 TNLGIVVGVDGSPCSHTAVEWAARDAQMRNVALRVVQVVPPVITAPEGWAFEYSR----- 60
Query: 75 IPLEEFRDQEVMKQ-YEVDLDQDVLDM-----LDAASKQKHVSVVAKLYWGDARDKLCEA 128
+E + +E+++ Y V +++ L+A+S + + ++ G L
Sbjct: 61 --FQEAQKREIVEHSYLVAQAHQIVEQAHKVALEASSSGRAAQITGEVLHGQIVPTLANI 118
Query: 129 VEAMKLDSLVMGSRGLGTIQRVLLGSVSNHVLANASCPVTIV 170
+ + +V+G RG G + LLGSVS+ ++ +A PV ++
Sbjct: 119 SRQVAM--VVLGYRGQGAVAGALLGSVSSSLVRHAHGPVAVI 158
Score = 29.6 bits (65), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 124 KLCEAVEAMKLDSLVMGSRGLGTIQRVLLGSVSNHVLANASCPVTIVKDP 173
+L E + +L +V+GS G G + LGSVS V+ + PV + + P
Sbjct: 263 RLLELAQTAQL--VVVGSHGRGGFPGMHLGSVSRAVVNSGQAPVIVARIP 310
>sp|P0A5F7|Y1996_MYCTU Universal stress protein Rv1996/MT2052 OS=Mycobacterium
tuberculosis GN=Rv1996 PE=1 SV=1
Length = 317
Score = 38.9 bits (89), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 71/162 (43%), Gaps = 17/162 (10%)
Query: 17 NNRSIGVALDFSKGSKLALKWAIDNLLEKGDTLYIIHIKLP--QGDESRNLLWSDTGSPL 74
N I V +D S S A++WA + + L ++ + P E +S
Sbjct: 6 TNLGIVVGVDGSPCSHTAVEWAARDAQMRNVALRVVQVVPPVITAPEGWAFEYSR----- 60
Query: 75 IPLEEFRDQEVMKQ-YEVDLDQDVLDM-----LDAASKQKHVSVVAKLYWGDARDKLCEA 128
+E + +E+++ Y V +++ L+A+S + + ++ G L
Sbjct: 61 --FQEAQKREIVEHSYLVAQAHQIVEQAHKVALEASSSGRAAQITGEVLHGQIVPTLANI 118
Query: 129 VEAMKLDSLVMGSRGLGTIQRVLLGSVSNHVLANASCPVTIV 170
+ + +V+G RG G + LLGSVS+ ++ +A PV ++
Sbjct: 119 SRQVAM--VVLGYRGQGAVAGALLGSVSSSLVRHAHGPVAVI 158
Score = 29.6 bits (65), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Query: 124 KLCEAVEAMKLDSLVMGSRGLGTIQRVLLGSVSNHVLANASCPVTIVKDP 173
+L E + +L +V+GS G G + LGSVS V+ + PV + + P
Sbjct: 263 RLLELAQTAQL--VVVGSHGRGGFPGMHLGSVSRAVVNSGQAPVIVARIP 310
>sp|P39177|USPG_ECOLI Universal stress protein G OS=Escherichia coli (strain K12) GN=uspG
PE=1 SV=2
Length = 142
Score = 38.5 bits (88), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 18/125 (14%)
Query: 56 LPQGDESRNLLWSDTGSPLIPLEEFRDQEVMKQYEVDLDQDVLDML---------DAASK 106
L Q D +LL GS + L F ++++E L + + L D +
Sbjct: 27 LAQDDGVIHLLHVLPGSASLSLHRFAAD--VRRFEEHLQHEAQERLQTMVSHFTIDPSRI 84
Query: 107 QKHVSVVAKLYWGDARDKLCEAVEAMKLDSLVMGSRGLGTIQRVLLGSVSNHVLANASCP 166
++HV +G RD++ E E + D +V+GSR +I LLGS ++ V+ +A+ P
Sbjct: 85 KQHVR------FGSVRDEVNELAEELGADVVVIGSRN-PSISTHLLGSNASSVIRHANLP 137
Query: 167 VTIVK 171
V +V+
Sbjct: 138 VLVVR 142
>sp|Q83M07|USPG_SHIFL Universal stress protein G OS=Shigella flexneri GN=uspG PE=3 SV=1
Length = 142
Score = 38.1 bits (87), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 18/125 (14%)
Query: 56 LPQGDESRNLLWSDTGSPLIPLEEFRDQEVMKQYEVDLDQDVLDML---------DAASK 106
L Q D +LL GS + L F ++++E L + + L D +
Sbjct: 27 LAQDDGVIHLLHVLPGSASLSLHRFAAD--VRRFEEHLQHEAEERLQTMVSHFTIDPSRI 84
Query: 107 QKHVSVVAKLYWGDARDKLCEAVEAMKLDSLVMGSRGLGTIQRVLLGSVSNHVLANASCP 166
++HV +G RD++ E E + D +V+GSR +I LLGS ++ V+ +A+ P
Sbjct: 85 KQHVR------FGSVRDEVNELAEELGADVVVIGSRN-PSISTHLLGSNASSVIRHANLP 137
Query: 167 VTIVK 171
V +V+
Sbjct: 138 VLVVR 142
>sp|Q8XBT3|USPG_ECO57 Universal stress protein G OS=Escherichia coli O157:H7 GN=uspG PE=3
SV=1
Length = 142
Score = 38.1 bits (87), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 18/125 (14%)
Query: 56 LPQGDESRNLLWSDTGSPLIPLEEFRDQEVMKQYEVDLDQDVLDML---------DAASK 106
L Q D +LL GS + L F ++++E L + + L D +
Sbjct: 27 LAQDDGVIHLLHVLPGSASLSLHRFAAD--VRRFEEHLQHEAEERLQTMVSHFTIDPSRI 84
Query: 107 QKHVSVVAKLYWGDARDKLCEAVEAMKLDSLVMGSRGLGTIQRVLLGSVSNHVLANASCP 166
++HV +G RD++ E E + D +V+GSR +I LLGS ++ V+ +A+ P
Sbjct: 85 KQHVR------FGSVRDEVNELAEELGADVVVIGSRN-PSISTHLLGSNASSVIRHANLP 137
Query: 167 VTIVK 171
V +V+
Sbjct: 138 VLVVR 142
>sp|O27222|Y1154_METTH Universal stress protein MTH_1154 OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=MTH_1154 PE=3 SV=1
Length = 146
Score = 37.7 bits (86), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 103 AASKQKHVSVVAKLYWGDARDKLCEAVEAMKLDSLVMGSRGLGTIQRVLLGSVSNHVLAN 162
+ +VS A + GD D++ + E +D +VMG+ G + + LLGSVS V+
Sbjct: 77 TGPENPNVSFRAVMREGDPADEIVKVAEEEDVDVIVMGT-GKSLVDKHLLGSVSEKVVHY 135
Query: 163 ASCPVTIVK 171
A C + +V+
Sbjct: 136 APCTIHLVR 144
>sp|P74148|Y1388_SYNY3 Universal stress protein Sll1388 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=sll1388 PE=3 SV=1
Length = 154
Score = 37.7 bits (86), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 135 DSLVMGSRGLGTIQRVLLGSVSNHVLANASCPVTIVK 171
D +V+G RGL + V LGSVS++V+ + C V IV+
Sbjct: 117 DLVVLGRRGLKGLAEVFLGSVSSYVIHHVQCSVLIVQ 153
>sp|P64922|Y2028_MYCBO Universal stress protein Mb2028c OS=Mycobacterium bovis (strain
ATCC BAA-935 / AF2122/97) GN=Mb2028c PE=3 SV=1
Length = 295
Score = 37.7 bits (86), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 72/152 (47%), Gaps = 25/152 (16%)
Query: 23 VALDFSKGSKLALKWAIDNLLEKGDTLYIIHIKLPQGDESRNLLWSDTGSPLIPLEEFRD 82
V +D S S+LA A D +G L +H WSD +P +F
Sbjct: 164 VGIDGSPVSELATAVAFDEASRRGVELIAVH------------AWSDVEVVELPGLDF-- 209
Query: 83 QEVMKQYEVDLDQDVLDMLDAASKQKHVSV-VAKLYWGD--ARDKLCEAVEAMKLDSLVM 139
V ++ E+ L + + A ++++ V V+++ D AR KL + + +L +V+
Sbjct: 210 SAVQQEAELSLAERL-----AGWQERYPDVPVSRVVVCDRPAR-KLVQKSASAQL--VVV 261
Query: 140 GSRGLGTIQRVLLGSVSNHVLANASCPVTIVK 171
GS G G + +LLGSVSN VL A PV + +
Sbjct: 262 GSHGRGGLTGMLLGSVSNAVLHAARVPVIVAR 293
Score = 37.4 bits (85), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 137 LVMGSRGLGTIQRVLLGSVSNHVLANASCPVTIV 170
+V+GS G G + R LLGSVS+ ++ A CPV ++
Sbjct: 114 VVLGSSGRGALARGLLGSVSSSLVRRAGCPVAVI 147
>sp|P64921|Y2005_MYCTU Universal stress protein Rv2005c/MT2061 OS=Mycobacterium
tuberculosis GN=Rv2005c PE=1 SV=1
Length = 295
Score = 37.7 bits (86), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 72/152 (47%), Gaps = 25/152 (16%)
Query: 23 VALDFSKGSKLALKWAIDNLLEKGDTLYIIHIKLPQGDESRNLLWSDTGSPLIPLEEFRD 82
V +D S S+LA A D +G L +H WSD +P +F
Sbjct: 164 VGIDGSPVSELATAVAFDEASRRGVELIAVH------------AWSDVEVVELPGLDF-- 209
Query: 83 QEVMKQYEVDLDQDVLDMLDAASKQKHVSV-VAKLYWGD--ARDKLCEAVEAMKLDSLVM 139
V ++ E+ L + + A ++++ V V+++ D AR KL + + +L +V+
Sbjct: 210 SAVQQEAELSLAERL-----AGWQERYPDVPVSRVVVCDRPAR-KLVQKSASAQL--VVV 261
Query: 140 GSRGLGTIQRVLLGSVSNHVLANASCPVTIVK 171
GS G G + +LLGSVSN VL A PV + +
Sbjct: 262 GSHGRGGLTGMLLGSVSNAVLHAARVPVIVAR 293
Score = 37.4 bits (85), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 137 LVMGSRGLGTIQRVLLGSVSNHVLANASCPVTIV 170
+V+GS G G + R LLGSVS+ ++ A CPV ++
Sbjct: 114 VVLGSSGRGALARGLLGSVSSSLVRRAGCPVAVI 147
>sp|P72817|Y1654_SYNY3 Universal stress protein Sll1654 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=sll1654 PE=3 SV=1
Length = 157
Score = 37.0 bits (84), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Query: 87 KQYEVDLDQDVLDMLDAAS---KQKHVSVVAKLYWGDARDKLCEAVEAMKLDSLVMGSRG 143
+ + +D + V +L+AA Q+ ++ G A +C+ + + D +VMG RG
Sbjct: 70 EAHGMDSPEAVAKLLEAAQAVFSQQGIATKTIEREGMASFTICDVADEVNADLIVMGCRG 129
Query: 144 LGTIQRVLLGSVSNHVLANASCPVTIV 170
LG + SV+ V+ + CPV +V
Sbjct: 130 LGLTTEGVAESVTARVINLSPCPVLVV 156
>sp|Q8FK07|USPG_ECOL6 Universal stress protein G OS=Escherichia coli O6:H1 (strain CFT073
/ ATCC 700928 / UPEC) GN=uspG PE=3 SV=2
Length = 142
Score = 36.6 bits (83), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 60/125 (48%), Gaps = 18/125 (14%)
Query: 56 LPQGDESRNLLWSDTGSPLIPLEEFRDQEVMKQYEVDLDQDVLDML---------DAASK 106
L Q D +LL GS + L F ++++E L + + L D +
Sbjct: 27 LAQDDGVIHLLHVLPGSASLSLHRFAAD--VRRFEEHLQHEAEERLQTMVSHFTIDPSRI 84
Query: 107 QKHVSVVAKLYWGDARDKLCEAVEAMKLDSLVMGSRGLGTIQRVLLGSVSNHVLANASCP 166
++HV +G RD++ E + + D +V+GSR +I LLGS ++ V+ +A+ P
Sbjct: 85 KQHVR------FGSVRDEVNELAKELDADVVVIGSRN-PSISTHLLGSNASSVIRHANLP 137
Query: 167 VTIVK 171
V +V+
Sbjct: 138 VLVVR 142
>sp|Q8S8S7|PUB34_ARATH U-box domain-containing protein 34 OS=Arabidopsis thaliana
GN=PUB34 PE=3 SV=1
Length = 801
Score = 36.2 bits (82), Expect = 0.11, Method: Composition-based stats.
Identities = 13/25 (52%), Positives = 19/25 (76%)
Query: 30 GSKLALKWAIDNLLEKGDTLYIIHI 54
GS+ A++WA+DNLL K D +IH+
Sbjct: 40 GSRRAVRWAVDNLLPKADKFVMIHV 64
>sp|Q4L751|Y1215_STAHJ Putative universal stress protein SH1215 OS=Staphylococcus
haemolyticus (strain JCSC1435) GN=SH1215 PE=3 SV=1
Length = 165
Score = 35.0 bits (79), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 102 DAASKQKHVSVVAKLYWGDARDKLCEAVEA-MKLDSLVMGSRGLGTIQRVLLGSVSNHVL 160
+ A++ +V +L +G + + + + + + +D ++ G+ GL ++R ++GSVS ++
Sbjct: 73 EVATRAGVTNVETRLEFGSPKAIIPKKLASELGVDLIMCGTSGLNAVERFIVGSVSEAIV 132
Query: 161 ANASCPVTIVK 171
+A C V +V+
Sbjct: 133 RHAPCDVLVVR 143
>sp|P67093|USPG_SALTY Universal stress protein G OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=uspG PE=3 SV=1
Length = 142
Score = 35.0 bits (79), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 118 WGDARDKLCEAVEAMKLDSLVMGSRGLGTIQRVLLGSVSNHVLANASCPVTIVK 171
+G RD + E E + D +V+GSR +I LLGS ++ V+ +A+ PV +V+
Sbjct: 90 FGSVRDVVNEMGEELDADVVVIGSRN-PSITTHLLGSNASSVVRHATLPVLVVR 142
>sp|P67094|USPG_SALTI Universal stress protein G OS=Salmonella typhi GN=uspG PE=3 SV=1
Length = 142
Score = 35.0 bits (79), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 118 WGDARDKLCEAVEAMKLDSLVMGSRGLGTIQRVLLGSVSNHVLANASCPVTIVK 171
+G RD + E E + D +V+GSR +I LLGS ++ V+ +A+ PV +V+
Sbjct: 90 FGSVRDVVNEMGEELDADVVVIGSRN-PSITTHLLGSNASSVVRHATLPVLVVR 142
>sp|P45680|USPA2_COXBU Universal stress protein A homolog 2 OS=Coxiella burnetii (strain
RSA 493 / Nine Mile phase I) GN=uspA2 PE=1 SV=1
Length = 146
Score = 35.0 bits (79), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 10/92 (10%)
Query: 89 YEVDLDQDVLDMLDAASKQKHVSVVAKLYW---------GDARDKLCEAVEAMKLDSLVM 139
Y V DV DML +K++ + ++L G A+ + E + +D +++
Sbjct: 52 YGVAAGVDVEDMLLEEAKKRMNEIASQLNISSDHQIVKVGPAKFLILEQAKNWGVDLIIV 111
Query: 140 GSRGLGTIQRVLLGSVSNHVLANASCPVTIVK 171
GS G IQ +LLGS SN VL A C V V+
Sbjct: 112 GSHGRHGIQ-LLLGSTSNAVLHGAKCDVLAVR 142
>sp|Q2FXL6|Y1819_STAA8 Putative universal stress protein SAOUHSC_01819 OS=Staphylococcus
aureus (strain NCTC 8325) GN=SAOUHSC_01819 PE=3 SV=1
Length = 166
Score = 34.3 bits (77), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 7/64 (10%)
Query: 112 VVAKLYWGDARD----KLCEAVEAMKLDSLVMGSRGLGTIQRVLLGSVSNHVLANASCPV 167
V +L +G + KL + A D ++ G+ GL ++R ++GSVS ++ +A C V
Sbjct: 83 VETRLEFGSPKSIIPKKLAHEINA---DLIMSGTSGLNAVERFIVGSVSESIVRHAPCDV 139
Query: 168 TIVK 171
+V+
Sbjct: 140 LVVR 143
>sp|Q6GFZ7|Y1788_STAAR Putative universal stress protein SAR1788 OS=Staphylococcus aureus
(strain MRSA252) GN=SAR1788 PE=3 SV=1
Length = 166
Score = 34.3 bits (77), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 7/64 (10%)
Query: 112 VVAKLYWGDARD----KLCEAVEAMKLDSLVMGSRGLGTIQRVLLGSVSNHVLANASCPV 167
V +L +G + KL + A D ++ G+ GL ++R ++GSVS ++ +A C V
Sbjct: 83 VETRLEFGSPKSIIPKKLAHEINA---DLIMSGTSGLNAVERFIVGSVSESIVRHAPCDV 139
Query: 168 TIVK 171
+V+
Sbjct: 140 LVVR 143
>sp|Q5HF64|Y1759_STAAC Putative universal stress protein SACOL1759 OS=Staphylococcus
aureus (strain COL) GN=SACOL1759 PE=3 SV=1
Length = 166
Score = 34.3 bits (77), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 7/64 (10%)
Query: 112 VVAKLYWGDARD----KLCEAVEAMKLDSLVMGSRGLGTIQRVLLGSVSNHVLANASCPV 167
V +L +G + KL + A D ++ G+ GL ++R ++GSVS ++ +A C V
Sbjct: 83 VETRLEFGSPKSIIPKKLAHEINA---DLIMSGTSGLNAVERFIVGSVSESIVRHAPCDV 139
Query: 168 TIVK 171
+V+
Sbjct: 140 LVVR 143
>sp|Q99TF3|Y1710_STAAM Putative universal stress protein SAV1710 OS=Staphylococcus aureus
(strain Mu50 / ATCC 700699) GN=SAV1710 PE=1 SV=1
Length = 166
Score = 34.3 bits (77), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 7/64 (10%)
Query: 112 VVAKLYWGDARD----KLCEAVEAMKLDSLVMGSRGLGTIQRVLLGSVSNHVLANASCPV 167
V +L +G + KL + A D ++ G+ GL ++R ++GSVS ++ +A C V
Sbjct: 83 VETRLEFGSPKSIIPKKLAHEINA---DLIMSGTSGLNAVERFIVGSVSESIVRHAPCDV 139
Query: 168 TIVK 171
+V+
Sbjct: 140 LVVR 143
>sp|Q2FG28|Y1656_STAA3 Putative universal stress protein SAUSA300_1656 OS=Staphylococcus
aureus (strain USA300) GN=SAUSA300_1656 PE=3 SV=1
Length = 166
Score = 34.3 bits (77), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 7/64 (10%)
Query: 112 VVAKLYWGDARD----KLCEAVEAMKLDSLVMGSRGLGTIQRVLLGSVSNHVLANASCPV 167
V +L +G + KL + A D ++ G+ GL ++R ++GSVS ++ +A C V
Sbjct: 83 VETRLEFGSPKSIIPKKLAHEINA---DLIMSGTSGLNAVERFIVGSVSESIVRHAPCDV 139
Query: 168 TIVK 171
+V+
Sbjct: 140 LVVR 143
>sp|Q7A0N0|Y1653_STAAW Putative universal stress protein MW1653 OS=Staphylococcus aureus
(strain MW2) GN=MW1653 PE=3 SV=1
Length = 166
Score = 34.3 bits (77), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 7/64 (10%)
Query: 112 VVAKLYWGDARD----KLCEAVEAMKLDSLVMGSRGLGTIQRVLLGSVSNHVLANASCPV 167
V +L +G + KL + A D ++ G+ GL ++R ++GSVS ++ +A C V
Sbjct: 83 VETRLEFGSPKSIIPKKLAHEINA---DLIMSGTSGLNAVERFIVGSVSESIVRHAPCDV 139
Query: 168 TIVK 171
+V+
Sbjct: 140 LVVR 143
>sp|Q6G8L7|Y1637_STAAS Putative universal stress protein SAS1637 OS=Staphylococcus aureus
(strain MSSA476) GN=SAS1637 PE=3 SV=1
Length = 166
Score = 34.3 bits (77), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 7/64 (10%)
Query: 112 VVAKLYWGDARD----KLCEAVEAMKLDSLVMGSRGLGTIQRVLLGSVSNHVLANASCPV 167
V +L +G + KL + A D ++ G+ GL ++R ++GSVS ++ +A C V
Sbjct: 83 VETRLEFGSPKSIIPKKLAHEINA---DLIMSGTSGLNAVERFIVGSVSESIVRHAPCDV 139
Query: 168 TIVK 171
+V+
Sbjct: 140 LVVR 143
>sp|Q2YTD0|Y1569_STAAB Putative universal stress protein SAB1569 OS=Staphylococcus aureus
(strain bovine RF122 / ET3-1) GN=SAB1569 PE=3 SV=1
Length = 166
Score = 34.3 bits (77), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 7/64 (10%)
Query: 112 VVAKLYWGDARD----KLCEAVEAMKLDSLVMGSRGLGTIQRVLLGSVSNHVLANASCPV 167
V +L +G + KL + A D ++ G+ GL ++R ++GSVS ++ +A C V
Sbjct: 83 VETRLEFGSPKSIIPKKLAHEINA---DLIMSGTSGLNAVERFIVGSVSESIVRHAPCDV 139
Query: 168 TIVK 171
+V+
Sbjct: 140 LVVR 143
>sp|Q7A551|Y1532_STAAN Putative universal stress protein SA1532 OS=Staphylococcus aureus
(strain N315) GN=SA1532 PE=1 SV=1
Length = 166
Score = 34.3 bits (77), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 7/64 (10%)
Query: 112 VVAKLYWGDARD----KLCEAVEAMKLDSLVMGSRGLGTIQRVLLGSVSNHVLANASCPV 167
V +L +G + KL + A D ++ G+ GL ++R ++GSVS ++ +A C V
Sbjct: 83 VETRLEFGSPKSIIPKKLAHEINA---DLIMSGTSGLNAVERFIVGSVSESIVRHAPCDV 139
Query: 168 TIVK 171
+V+
Sbjct: 140 LVVR 143
>sp|Q8CS61|Y1385_STAES Putative universal stress protein SE_1385 OS=Staphylococcus
epidermidis (strain ATCC 12228) GN=SE_1385 PE=3 SV=1
Length = 166
Score = 34.3 bits (77), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 25/37 (67%)
Query: 135 DSLVMGSRGLGTIQRVLLGSVSNHVLANASCPVTIVK 171
D ++ G+ GL ++R ++GSVS ++ +A C V +V+
Sbjct: 107 DLIMSGTSGLNAVERFIVGSVSEAIVRHAPCDVLVVR 143
>sp|Q5HNJ5|Y1273_STAEQ Putative universal stress protein SERP1273 OS=Staphylococcus
epidermidis (strain ATCC 35984 / RP62A) GN=SERP1273 PE=3
SV=1
Length = 166
Score = 34.3 bits (77), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 25/37 (67%)
Query: 135 DSLVMGSRGLGTIQRVLLGSVSNHVLANASCPVTIVK 171
D ++ G+ GL ++R ++GSVS ++ +A C V +V+
Sbjct: 107 DLIMSGTSGLNAVERFIVGSVSEAIVRHAPCDVLVVR 143
>sp|Q49YE0|Y1056_STAS1 Putative universal stress protein SSP1056 OS=Staphylococcus
saprophyticus subsp. saprophyticus (strain ATCC 15305 /
DSM 20229) GN=SSP1056 PE=3 SV=1
Length = 167
Score = 33.5 bits (75), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 25/37 (67%)
Query: 135 DSLVMGSRGLGTIQRVLLGSVSNHVLANASCPVTIVK 171
D ++ G+ GL ++R ++GSVS ++ ++ C V +V+
Sbjct: 107 DLIMCGTSGLNAVERFIVGSVSEAIVRHSPCDVLVVR 143
>sp|P32351|IMPX_YEAST Sugar utilization regulatory protein IMP2 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=IMP2' PE=1
SV=2
Length = 346
Score = 33.1 bits (74), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 22/39 (56%)
Query: 15 ASNNRSIGVALDFSKGSKLALKWAIDNLLEKGDTLYIIH 53
A N RS + D S S AL + + + +GDT+YI+H
Sbjct: 206 AGNQRSFILYTDLSSESTYALTYLMGAAVNQGDTVYIVH 244
>sp|P92939|ECA1_ARATH Calcium-transporting ATPase 1, endoplasmic reticulum-type
OS=Arabidopsis thaliana GN=ECA1 PE=1 SV=2
Length = 1061
Score = 33.1 bits (74), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 2 WKTLNKLIFFFKMASNNRSIGVALDFSKGSKLAL-KWAIDNLLEKGDTLYIIHIKLPQGD 60
W L + I + + +S+GV +D S G+KL L K A++N+LE+ HI+L G
Sbjct: 499 WSELEQRIATLEFDRDRKSMGVMVDSSSGNKLLLVKGAVENVLERS-----THIQLLDGS 553
Query: 61 E 61
+
Sbjct: 554 K 554
>sp|O06153|Y1636_MYCTU Universal stress protein Rv1636/MT1672 OS=Mycobacterium
tuberculosis GN=Rv1636 PE=1 SV=1
Length = 146
Score = 32.7 bits (73), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 47/99 (47%), Gaps = 6/99 (6%)
Query: 78 EEFRDQEVMK--QYEVDLDQDVLDMLDAASKQKHVS----VVAKLYWGDARDKLCEAVEA 131
E+ R +++K Y+V + ++L A ++ H + V + G D L +
Sbjct: 45 EDARAADILKDESYKVTGTAPIYEILHDAKERAHNAGAKNVEERPIVGAPVDALVNLADE 104
Query: 132 MKLDSLVMGSRGLGTIQRVLLGSVSNHVLANASCPVTIV 170
K D LV+G+ GL TI LLGSV +V A V IV
Sbjct: 105 EKADLLVVGNVGLSTIAGRLLGSVPANVSRRAKVDVLIV 143
>sp|P73475|Y1230_SYNY3 Universal stress protein Slr1230 OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=slr1230 PE=3 SV=1
Length = 287
Score = 32.7 bits (73), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 28/53 (52%)
Query: 115 KLYWGDARDKLCEAVEAMKLDSLVMGSRGLGTIQRVLLGSVSNHVLANASCPV 167
+L G A + + E +D L+MG+ G I+ +++GS + VL S PV
Sbjct: 231 ELLVGHAEEAIVRYQEDNAIDLLLMGAHGHSRIRHLVIGSTTAQVLRKTSIPV 283
>sp|B1KW07|BIOD_CLOBM ATP-dependent dethiobiotin synthetase BioD OS=Clostridium botulinum
(strain Loch Maree / Type A3) GN=bioD PE=3 SV=1
Length = 227
Score = 32.7 bits (73), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 65/142 (45%), Gaps = 16/142 (11%)
Query: 19 RSIGVALDFSKGSKLALKWAIDNLLEKGDTLYIIHIKLPQGD--ESRNLLWSDTGSPLIP 76
R + + + K + L+ ID+ L GD Y+ +I +GD ++ + ++ SP +
Sbjct: 28 REVNINCGYYKAA-LSGAERIDSKLIAGDANYVYNIANIKGDPNDAVSYIFQQAVSPHLA 86
Query: 77 LEEFRDQEVMKQYEVDLDQDVLDMLDAASKQKHVSV------VAKLYWGDARDKLCEAVE 130
+ + E+ +D+ D +K +++V + + G + L V+
Sbjct: 87 AK-------LNNVEISMDKIKKDFSCIKNKYDYITVEGSGGIICPISMGKEKIMLENIVK 139
Query: 131 AMKLDSLVMGSRGLGTIQRVLL 152
++KL ++V+ GLGTI +L
Sbjct: 140 SLKLPAIVIADAGLGTINNTIL 161
>sp|Q50777|Y1538_METTM Universal stress protein MTBMA_c15380 OS=Methanothermobacter
marburgensis (strain DSM 2133 / 14651 / NBRC 100331 /
OCM 82 / Marburg) GN=MTBMA_c15380 PE=3 SV=1
Length = 143
Score = 32.7 bits (73), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 119 GDARDKLCEAVEAMKLDSLVMGSRGLGTIQRVLLGSVSNHVLANASCPVTIVK 171
G+ D++ + E +D ++MG+ G + + LLGSVS V+ A C + +V+
Sbjct: 90 GNPADEIVKLAEEEDVDVIIMGT-GKSLVDKHLLGSVSEKVVHYAPCTIHLVR 141
>sp|Q9XES1|ECA4_ARATH Calcium-transporting ATPase 4, endoplasmic reticulum-type
OS=Arabidopsis thaliana GN=ECA4 PE=2 SV=2
Length = 1061
Score = 32.3 bits (72), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Query: 2 WKTLNKLIFFFKMASNNRSIGVALDFSKGSKLAL-KWAIDNLLEKGDTLYIIHIKLPQG 59
W L + I + + +S+GV +D S G KL L K A++N+LE+ HI+L G
Sbjct: 499 WSELEQRIATLEFDRDRKSMGVMVDSSSGKKLLLVKGAVENVLERS-----THIQLLDG 552
>sp|Q5UPQ0|YR757_MIMIV Putative F-box protein R757 OS=Acanthamoeba polyphaga mimivirus
GN=MIMI_R757 PE=4 SV=1
Length = 650
Score = 32.3 bits (72), Expect = 1.7, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 79 EFRDQEVMKQYEVDLDQDVLDMLDAASKQKHVSVVAKLYWGDARDKLCEAVEAMKLDSLV 138
EFRD+ MK YE D+L KQ S + +LY R K + + + K+D ++
Sbjct: 248 EFRDRVFMKNYE-----DLLPNTHLYDKQ---SALNRLYKKSNRRKFIDNLLSNKMDIMI 299
Query: 139 MGSRGL 144
GS GL
Sbjct: 300 GGSIGL 305
>sp|P64996|Y2346_MYCBO Universal stress protein Mb2346c OS=Mycobacterium bovis (strain
ATCC BAA-935 / AF2122/97) GN=Mb2346c PE=3 SV=1
Length = 292
Score = 32.3 bits (72), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 125 LCEAVEAMKLDSLVMGSRGLGTIQRVLLGSVSNHVLANASCPVTI 169
L + VE ++ + LV+GS G RVL+GS ++ +L ++ PV I
Sbjct: 95 LLDVVEELEAEVLVLGSFPSGRRARVLIGSTADRLLHSSPVPVAI 139
>sp|P64995|Y2319_MYCTU Universal stress protein Rv2319c/MT2382 OS=Mycobacterium
tuberculosis GN=Rv2319c PE=3 SV=1
Length = 292
Score = 32.3 bits (72), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 125 LCEAVEAMKLDSLVMGSRGLGTIQRVLLGSVSNHVLANASCPVTI 169
L + VE ++ + LV+GS G RVL+GS ++ +L ++ PV I
Sbjct: 95 LLDVVEELEAEVLVLGSFPSGRRARVLIGSTADRLLHSSPVPVAI 139
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.135 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,016,260
Number of Sequences: 539616
Number of extensions: 2654398
Number of successful extensions: 7354
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 7302
Number of HSP's gapped (non-prelim): 70
length of query: 179
length of database: 191,569,459
effective HSP length: 110
effective length of query: 69
effective length of database: 132,211,699
effective search space: 9122607231
effective search space used: 9122607231
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)