BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041487
(218 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 112 bits (280), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 78/215 (36%), Positives = 102/215 (47%), Gaps = 59/215 (27%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
N++ VEKIG+G +G VYK N TG+ VA+K I + E EGVPS I +SLLKEL H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 102 IVRLLDVLTTGRYVYLVFEYLDLDLG---------------------------SFIRKHT 134
IV+LLDV+ T +YLVFE+L DL SF H
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSHR 123
Query: 135 I--TSIRPH-----------------IKEVGSP------------YKAPESRIRSSVYST 163
+ ++P + G P Y+APE + YST
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYST 183
Query: 164 PHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVR 197
D+W++GCIFAEMV+ + LFP + D L I R
Sbjct: 184 AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 218
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 106 bits (264), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 98/215 (45%), Gaps = 59/215 (27%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
N++ VEKIG+G +G VYK N TG+ VA+K I + E EGVPS I +SLLKEL H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 102 IVRLLDVLTTGRYVYLVFEYLDLDLGSFIRKHTITSI----------------------- 138
IV+LLDV+ T +YLVFE+L DL F+ +T I
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHR 123
Query: 139 ------RPH-----------------IKEVGSPYKAPESRIRSSVYSTPH---------- 165
+P + G P + + + Y P
Sbjct: 124 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYST 183
Query: 166 --DVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVR 197
D+W++GCIFAEMV+ + LFP + D L I R
Sbjct: 184 AVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 218
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 99.4 bits (246), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 66/97 (68%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
N++ VEKIG+G +G VYK N TG+ VA+K I + E EGVPS I +SLLKEL H N
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 65
Query: 102 IVRLLDVLTTGRYVYLVFEYLDLDLGSFIRKHTITSI 138
IV+LLDV+ T +YLVFE+L +DL F+ +T I
Sbjct: 66 IVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGI 102
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVR 197
Y+APE + YST D+W++GCIFAEMV+ + LFP + D L I R
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 220
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 99.4 bits (246), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 66/97 (68%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
N++ VEKIG+G +G VYK N TG+ VA+K I + E EGVPS I +SLLKEL H N
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 102 IVRLLDVLTTGRYVYLVFEYLDLDLGSFIRKHTITSI 138
IV+LLDV+ T +YLVFE+L +DL F+ +T I
Sbjct: 67 IVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGI 103
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVR 197
Y+APE + YST D+W++GCIFAEMV+ + LFP + D L I R
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 221
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 99.4 bits (246), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 66/97 (68%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
N++ VEKIG+G +G VYK N TG+ VA+K I + E EGVPS I +SLLKEL H N
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 102 IVRLLDVLTTGRYVYLVFEYLDLDLGSFIRKHTITSI 138
IV+LLDV+ T +YLVFE+L +DL F+ +T I
Sbjct: 67 IVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGI 103
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVR 197
Y+APE + YST D+W++GCIFAEMV+ + LFP + D L I R
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 221
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 66/97 (68%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
N++ VEKIG+G +G VYK N TG+ VA+K I + E EGVPS I +SLLKEL H N
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 102 IVRLLDVLTTGRYVYLVFEYLDLDLGSFIRKHTITSI 138
IV+LLDV+ T +YLVFE+L +DL F+ +T I
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLSMDLKKFMDASALTGI 101
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVR 197
Y+APE + YST D+W++GCIFAEMV+ + LFP + D L I R
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 219
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 98.6 bits (244), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 66/97 (68%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
N++ VEKIG+G +G VYK N TG+ VA+K I + E EGVPS I +SLLKEL H N
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 102 IVRLLDVLTTGRYVYLVFEYLDLDLGSFIRKHTITSI 138
IV+LLDV+ T +YLVFE++D DL F+ +T I
Sbjct: 67 IVKLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGI 103
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVR 197
Y+APE + YST D+W++GCIFAEMV+ + LFP + D L I R
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 221
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 97.8 bits (242), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 66/97 (68%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
N++ VEKIG+G +G VYK N TG+ VA+K I + E EGVPS I +SLLKEL H N
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 102 IVRLLDVLTTGRYVYLVFEYLDLDLGSFIRKHTITSI 138
IV+LLDV+ T +YLVFE+L DL +F+ +T I
Sbjct: 67 IVKLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGI 103
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 97.8 bits (242), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 96/213 (45%), Gaps = 59/213 (27%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y +EKIG+G +G VYK N G+ A+K I ++ E EG+PS I +S+LKEL+H NI
Sbjct: 4 YHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNI 62
Query: 103 VRLLDVLTTGRYVYLVFEYLDLDLGSFI----------------------------RKHT 134
V+L DV+ T + + LVFE+LD DL + R+
Sbjct: 63 VKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVL 122
Query: 135 ITSIRPH-----------------IKEVGSPYKAPESRIRSSVYSTPH------------ 165
++P + G P + I + Y P
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTI 182
Query: 166 DVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVR 197
D+W+VGCIFAEMV+G PLFP + D L I R
Sbjct: 183 DIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFR 215
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 97.4 bits (241), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 65/97 (67%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
N++ VEKIG+G +G VYK N TG+ VA+K I + E EGVPS I +SLLKEL H N
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 65
Query: 102 IVRLLDVLTTGRYVYLVFEYLDLDLGSFIRKHTITSI 138
IV+LLDV+ T +YLVFE+L DL F+ +T I
Sbjct: 66 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI 102
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 97.4 bits (241), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 65/97 (67%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
N++ VEKIG+G +G VYK N TG+ VA+K I + E EGVPS I +SLLKEL H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 102 IVRLLDVLTTGRYVYLVFEYLDLDLGSFIRKHTITSI 138
IV+LLDV+ T +YLVFE+L DL F+ +T I
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI 100
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 97.4 bits (241), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 65/97 (67%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
N++ VEKIG+G +G VYK N TG+ VA+K I + E EGVPS I +SLLKEL H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 102 IVRLLDVLTTGRYVYLVFEYLDLDLGSFIRKHTITSI 138
IV+LLDV+ T +YLVFE+L DL F+ +T I
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI 100
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 97.4 bits (241), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 65/97 (67%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
N++ VEKIG+G +G VYK N TG+ VA+K I + E EGVPS I +SLLKEL H N
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 102 IVRLLDVLTTGRYVYLVFEYLDLDLGSFIRKHTITSI 138
IV+LLDV+ T +YLVFE+L DL F+ +T I
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI 101
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 97.4 bits (241), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 65/97 (67%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
N++ VEKIG+G +G VYK N TG+ VA+K I + E EGVPS I +SLLKEL H N
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 102 IVRLLDVLTTGRYVYLVFEYLDLDLGSFIRKHTITSI 138
IV+LLDV+ T +YLVFE+L DL F+ +T I
Sbjct: 67 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI 103
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 97.4 bits (241), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 65/97 (67%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
N++ VEKIG+G +G VYK N TG+ VA+K I + E EGVPS I +SLLKEL H N
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 65
Query: 102 IVRLLDVLTTGRYVYLVFEYLDLDLGSFIRKHTITSI 138
IV+LLDV+ T +YLVFE+L DL F+ +T I
Sbjct: 66 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI 102
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 97.4 bits (241), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 65/97 (67%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
N++ VEKIG+G +G VYK N TG+ VA+K I + E EGVPS I +SLLKEL H N
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 65
Query: 102 IVRLLDVLTTGRYVYLVFEYLDLDLGSFIRKHTITSI 138
IV+LLDV+ T +YLVFE+L DL F+ +T I
Sbjct: 66 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI 102
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 97.4 bits (241), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 65/97 (67%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
N++ VEKIG+G +G VYK N TG+ VA+K I + E EGVPS I +SLLKEL H N
Sbjct: 8 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 67
Query: 102 IVRLLDVLTTGRYVYLVFEYLDLDLGSFIRKHTITSI 138
IV+LLDV+ T +YLVFE+L DL F+ +T I
Sbjct: 68 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI 104
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 97.4 bits (241), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 65/97 (67%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
N++ VEKIG+G +G VYK N TG+ VA+K I + E EGVPS I +SLLKEL H N
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 102 IVRLLDVLTTGRYVYLVFEYLDLDLGSFIRKHTITSI 138
IV+LLDV+ T +YLVFE+L DL F+ +T I
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI 101
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 97.4 bits (241), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 65/97 (67%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
N++ VEKIG+G +G VYK N TG+ VA+K I + E EGVPS I +SLLKEL H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 102 IVRLLDVLTTGRYVYLVFEYLDLDLGSFIRKHTITSI 138
IV+LLDV+ T +YLVFE+L DL F+ +T I
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI 100
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 97.4 bits (241), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 65/97 (67%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
N++ VEKIG+G +G VYK N TG+ VA+K I + E EGVPS I +SLLKEL H N
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 70
Query: 102 IVRLLDVLTTGRYVYLVFEYLDLDLGSFIRKHTITSI 138
IV+LLDV+ T +YLVFE+L DL F+ +T I
Sbjct: 71 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI 107
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 97.4 bits (241), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 65/97 (67%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
N++ VEKIG+G +G VYK N TG+ VA+K I + E EGVPS I +SLLKEL H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 102 IVRLLDVLTTGRYVYLVFEYLDLDLGSFIRKHTITSI 138
IV+LLDV+ T +YLVFE+L DL F+ +T I
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGI 100
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 97.4 bits (241), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 65/97 (67%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
N++ VEKIG+G +G VYK N TG+ VA+K I + E EGVPS I +SLLKEL H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 102 IVRLLDVLTTGRYVYLVFEYLDLDLGSFIRKHTITSI 138
IV+LLDV+ T +YLVFE+L DL F+ +T I
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI 99
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 97.4 bits (241), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 65/97 (67%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
N++ VEKIG+G +G VYK N TG+ VA+K I + E EGVPS I +SLLKEL H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 102 IVRLLDVLTTGRYVYLVFEYLDLDLGSFIRKHTITSI 138
IV+LLDV+ T +YLVFE+L DL F+ +T I
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI 100
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 97.4 bits (241), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 65/97 (67%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
N++ VEKIG+G +G VYK N TG+ VA+K I + E EGVPS I +SLLKEL H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 102 IVRLLDVLTTGRYVYLVFEYLDLDLGSFIRKHTITSI 138
IV+LLDV+ T +YLVFE+L DL F+ +T I
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI 99
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 97.4 bits (241), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 96/213 (45%), Gaps = 59/213 (27%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y +EKIG+G +G VYK N G+ A+K I ++ E EG+PS I +S+LKEL+H NI
Sbjct: 4 YHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNI 62
Query: 103 VRLLDVLTTGRYVYLVFEYLDLDLGSFI----------------------------RKHT 134
V+L DV+ T + + LVFE+LD DL + R+
Sbjct: 63 VKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVL 122
Query: 135 ITSIRPH-----------------IKEVGSPYKAPESRIRSSVYSTPH------------ 165
++P + G P + + + Y P
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTI 182
Query: 166 DVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVR 197
D+W+VGCIFAEMV+G PLFP + D L I R
Sbjct: 183 DIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFR 215
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 97.4 bits (241), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 65/97 (67%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
N++ VEKIG+G +G VYK N TG+ VA+K I + E EGVPS I +SLLKEL H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 102 IVRLLDVLTTGRYVYLVFEYLDLDLGSFIRKHTITSI 138
IV+LLDV+ T +YLVFE+L DL F+ +T I
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI 100
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 97.4 bits (241), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 65/97 (67%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
N++ VEKIG+G +G VYK N TG+ VA+K I + E EGVPS I +SLLKEL H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 102 IVRLLDVLTTGRYVYLVFEYLDLDLGSFIRKHTITSI 138
IV+LLDV+ T +YLVFE+L DL F+ +T I
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI 99
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 97.4 bits (241), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 65/97 (67%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
N++ VEKIG+G +G VYK N TG+ VA+K I + E EGVPS I +SLLKEL H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 102 IVRLLDVLTTGRYVYLVFEYLDLDLGSFIRKHTITSI 138
IV+LLDV+ T +YLVFE+L DL F+ +T I
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI 100
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 97.4 bits (241), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 65/97 (67%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
N++ VEKIG+G +G VYK N TG+ VA+K I + E EGVPS I +SLLKEL H N
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 102 IVRLLDVLTTGRYVYLVFEYLDLDLGSFIRKHTITSI 138
IV+LLDV+ T +YLVFE+L DL F+ +T I
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI 101
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 97.4 bits (241), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 65/97 (67%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
N++ VEKIG+G +G VYK N TG+ VA+K I + E EGVPS I +SLLKEL H N
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 64
Query: 102 IVRLLDVLTTGRYVYLVFEYLDLDLGSFIRKHTITSI 138
IV+LLDV+ T +YLVFE+L DL F+ +T I
Sbjct: 65 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI 101
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 97.4 bits (241), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 65/97 (67%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
N++ VEKIG+G +G VYK N TG+ VA+K I + E EGVPS I +SLLKEL H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 102 IVRLLDVLTTGRYVYLVFEYLDLDLGSFIRKHTITSI 138
IV+LLDV+ T +YLVFE+L DL F+ +T I
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI 99
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 97.4 bits (241), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 65/97 (67%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
N++ VEKIG+G +G VYK N TG+ VA+K I + E EGVPS I +SLLKEL H N
Sbjct: 8 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 67
Query: 102 IVRLLDVLTTGRYVYLVFEYLDLDLGSFIRKHTITSI 138
IV+LLDV+ T +YLVFE+L DL F+ +T I
Sbjct: 68 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI 104
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 97.1 bits (240), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 65/97 (67%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
N++ VEKIG+G +G VYK N TG+ VA+K I + E EGVPS I +SLLKEL H N
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 70
Query: 102 IVRLLDVLTTGRYVYLVFEYLDLDLGSFIRKHTITSI 138
IV+LLDV+ T +YLVFE+L DL F+ +T I
Sbjct: 71 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI 107
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 97.1 bits (240), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 65/97 (67%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
N++ VEKIG+G +G VYK N TG+ VA+K I + E EGVPS I +SLLKEL H N
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 66
Query: 102 IVRLLDVLTTGRYVYLVFEYLDLDLGSFIRKHTITSI 138
IV+LLDV+ T +YLVFE+L DL F+ +T I
Sbjct: 67 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI 103
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 97.1 bits (240), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 96/213 (45%), Gaps = 59/213 (27%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y +EKIG+G +G VYK N G+ A+K I ++ E EG+PS I +S+LKEL+H NI
Sbjct: 4 YHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNI 62
Query: 103 VRLLDVLTTGRYVYLVFEYLDLDLGSFI----------------------------RKHT 134
V+L DV+ T + + LVFE+LD DL + R+
Sbjct: 63 VKLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVL 122
Query: 135 ITSIRPH-----------------IKEVGSPYKAPESRIRSSVYSTPH------------ 165
++P + G P + + + Y P
Sbjct: 123 HRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTI 182
Query: 166 DVWAVGCIFAEMVSGKPLFP-CGKKDHLSLIVR 197
D+W+VGCIFAEMV+G PLFP + D L I R
Sbjct: 183 DIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFR 215
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 96.3 bits (238), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/97 (51%), Positives = 66/97 (68%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
N++ VEKIG+G +G VYK N TG+ VA+K I + E EGVPS I +SLLKEL H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 102 IVRLLDVLTTGRYVYLVFEYLDLDLGSFIRKHTITSI 138
IV+LLDV+ T +YLVFE++ DL +F+ +T I
Sbjct: 63 IVKLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGI 99
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/97 (51%), Positives = 64/97 (65%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
N++ VEKIG+G +G VYK N TG+ VA+ I + E EGVPS I +SLLKEL H N
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN 63
Query: 102 IVRLLDVLTTGRYVYLVFEYLDLDLGSFIRKHTITSI 138
IV+LLDV+ T +YLVFE+L DL F+ +T I
Sbjct: 64 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI 100
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/97 (51%), Positives = 64/97 (65%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
N++ VEKIG+G +G VYK N TG+ VA+ I + E EGVPS I +SLLKEL H N
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 102 IVRLLDVLTTGRYVYLVFEYLDLDLGSFIRKHTITSI 138
IV+LLDV+ T +YLVFE+L DL F+ +T I
Sbjct: 63 IVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGI 99
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 94.7 bits (234), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 95/201 (47%), Gaps = 58/201 (28%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
Y+ +EK+G+G +G VYK + + G+ VA+K I + E EG+PS I +SLLKEL H N
Sbjct: 22 KYQKLEKVGEGTYGVVYKAKDSQ-GRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 102 IVRLLDVLTTGRYVYLVFEYLDLDLGSFI--------------------------RKHTI 135
IV L+DV+ + R + LVFE+++ DL + +H I
Sbjct: 81 IVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRI 140
Query: 136 --TSIRPH-----------------IKEVGSPYKAPESRIRSSVYSTPH----------- 165
++P + G P ++ + + Y P
Sbjct: 141 LHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTS 200
Query: 166 -DVWAVGCIFAEMVSGKPLFP 185
D+W++GCIFAEM++GKPLFP
Sbjct: 201 VDIWSIGCIFAEMITGKPLFP 221
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 94.7 bits (234), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 95/201 (47%), Gaps = 58/201 (28%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
Y+ +EK+G+G +G VYK + + G+ VA+K I + E EG+PS I +SLLKEL H N
Sbjct: 22 KYQKLEKVGEGTYGVVYKAKDSQ-GRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 102 IVRLLDVLTTGRYVYLVFEYLDLDLGSFI--------------------------RKHTI 135
IV L+DV+ + R + LVFE+++ DL + +H I
Sbjct: 81 IVSLIDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRI 140
Query: 136 --TSIRPH-----------------IKEVGSPYKAPESRIRSSVYSTPH----------- 165
++P + G P ++ + + Y P
Sbjct: 141 LHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTS 200
Query: 166 -DVWAVGCIFAEMVSGKPLFP 185
D+W++GCIFAEM++GKPLFP
Sbjct: 201 VDIWSIGCIFAEMITGKPLFP 221
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/213 (32%), Positives = 99/213 (46%), Gaps = 59/213 (27%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y ++K+G+G + VYK + T VA+K I +++E EG P I VSLLK+L+H NI
Sbjct: 4 YIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHE-EGAPCTAIREVSLLKDLKHANI 62
Query: 103 VRLLDVLTTGRYVYLVFEYLDLDL-------GSFIRKHTIT------------------- 136
V L D++ T + + LVFEYLD DL G+ I H +
Sbjct: 63 VTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVL 122
Query: 137 --SIRPH---IKEVGS--------------P------------YKAPESRIRSSVYSTPH 165
++P I E G P Y+ P+ + S+ YST
Sbjct: 123 HRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQI 182
Query: 166 DVWAVGCIFAEMVSGKPLFPCGK-KDHLSLIVR 197
D+W VGCIF EM +G+PLFP ++ L I R
Sbjct: 183 DMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFR 215
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 91.7 bits (226), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 95/214 (44%), Gaps = 59/214 (27%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y+ +EKIG+G +G V+K N ET + VA+K + + ++ EGVPS + + LLKEL+H NI
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI 63
Query: 103 VRLLDVLTTGRYVYLVFEYLDLDLGSFI----------------------------RKHT 134
VRL DVL + + + LVFE+ D DL + R
Sbjct: 64 VRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVL 123
Query: 135 ITSIRPH-----------------IKEVGSPYKAPESRIRSSVYSTPH------------ 165
++P + G P + + + + Y P
Sbjct: 124 HRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSI 183
Query: 166 DVWAVGCIFAEMV-SGKPLFPCGK-KDHLSLIVR 197
D+W+ GCIFAE+ +G+PLFP D L I R
Sbjct: 184 DMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFR 217
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 94/214 (43%), Gaps = 59/214 (27%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y+ +EKIG+G +G V+K N ET + VA+K + + ++ EGVPS + + LLKEL+H NI
Sbjct: 4 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI 63
Query: 103 VRLLDVLTTGRYVYLVFEYLDLDLGSFI----------------------------RKHT 134
VRL DVL + + + LVFE+ D DL + R
Sbjct: 64 VRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVL 123
Query: 135 ITSIRPH-----------------IKEVGSPYKAPESRIRSSVYSTPH------------ 165
++P + G P + + + + Y P
Sbjct: 124 HRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSI 183
Query: 166 DVWAVGCIFAEMV-SGKPLFPCGK-KDHLSLIVR 197
D+W+ GCIFAE+ + +PLFP D L I R
Sbjct: 184 DMWSAGCIFAELANAARPLFPGNDVDDQLKRIFR 217
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 64/97 (65%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y+ + K+G+G +GEVYK ++ T + VAIK I +++E EGVP I VSLLKEL+H NI
Sbjct: 36 YRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNI 95
Query: 103 VRLLDVLTTGRYVYLVFEYLDLDLGSFIRKHTITSIR 139
+ L V+ ++L+FEY + DL ++ K+ S+R
Sbjct: 96 IELKSVIHHNHRLHLIFEYAENDLKKYMDKNPDVSMR 132
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFP 185
Y+ PE + S YST D+W++ CI+AEM+ PLFP
Sbjct: 203 YRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFP 239
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 85.1 bits (209), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 93/206 (45%), Gaps = 58/206 (28%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
Y+ + KIG+G +G V+KC N +TG+ VAIK + + + + +LK+L+H N
Sbjct: 4 KYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPN 63
Query: 102 IVRLLDVLTTGRYVYLVFEYLD--------------------------LDLGSFIRKHTI 135
+V LL+V R ++LVFEY D L +F KH
Sbjct: 64 LVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNC 123
Query: 136 --TSIRP----------------------------HIKEVGSPY-KAPESRIRSSVYSTP 164
++P + EV + + ++PE + + Y P
Sbjct: 124 IHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPP 183
Query: 165 HDVWAVGCIFAEMVSGKPLFPCGKKD 190
DVWA+GC+FAE++SG PL+P GK D
Sbjct: 184 VDVWAIGCVFAELLSGVPLWP-GKSD 208
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 83.6 bits (205), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 62/93 (66%), Gaps = 1/93 (1%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
+K +EK+G G + VYK LN TG VA+K + + +E EG PS I +SL+KEL+H+NI
Sbjct: 7 FKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSE-EGTPSTAIREISLMKELKHENI 65
Query: 103 VRLLDVLTTGRYVYLVFEYLDLDLGSFIRKHTI 135
VRL DV+ T + LVFE++D DL ++ T+
Sbjct: 66 VRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTV 98
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFP-CGKKDHLSLI 195
Y+AP+ + S YST D+W+ GCI AEM++GKPLFP ++ L LI
Sbjct: 174 YRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLI 221
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 89/210 (42%), Gaps = 62/210 (29%)
Query: 33 EQMEKVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVS 92
+ MEK Y+ + +G+G +G V KC N +TG+ VAIK ++ + V + +
Sbjct: 22 QSMEK-----YENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIK 76
Query: 93 LLKELEHDNIVRLLDVLTTGRYVYLVFEYLD-------------LDLG------------ 127
LLK+L H+N+V LL+V + YLVFE++D LD
Sbjct: 77 LLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIING 136
Query: 128 -SFIRKHTI--TSIRPH-----------------IKEVGSP------------YKAPESR 155
F H I I+P + + +P Y+APE
Sbjct: 137 IGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELL 196
Query: 156 IRSSVYSTPHDVWAVGCIFAEMVSGKPLFP 185
+ Y DVWA+GC+ EM G+PLFP
Sbjct: 197 VGDVKYGKAVDVWAIGCLVTEMFMGEPLFP 226
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 91/226 (40%), Gaps = 62/226 (27%)
Query: 37 KVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPE---GVPSYLIAGVSL 93
K + Y+ ++ +G+G F VYK + T + VAIK I + + E G+ + + L
Sbjct: 6 KSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKL 65
Query: 94 LKELEHDNIVRLLDVLTTGRYVYLVFEYLDLDLGSFIRKHTITSIRPHI----------- 142
L+EL H NI+ LLD + LVF++++ DL I+ +++ HI
Sbjct: 66 LQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGL 125
Query: 143 ----------------------------------KEVGSP------------YKAPESRI 156
K GSP Y+APE
Sbjct: 126 EYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLF 185
Query: 157 RSSVYSTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRYFTAL 202
+ +Y D+WAVGCI AE++ P P G D L + R F L
Sbjct: 186 GARMYGVGVDMWAVGCILAELLLRVPFLP-GDSD-LDQLTRIFETL 229
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 63/102 (61%), Gaps = 9/102 (8%)
Query: 40 DWNYKVVEKIGQGVFGEVYKCLNLETGKK-VAIKMINIQNEPEGVPSYLIAGVSLLKEL- 97
D Y+ V +IG+G +G+V+K +L+ G + VA+K + +Q EG+P I V++L+ L
Sbjct: 10 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLE 69
Query: 98 --EHDNIVRLLDVLTTGRY-----VYLVFEYLDLDLGSFIRK 132
EH N+VRL DV T R + LVFE++D DL +++ K
Sbjct: 70 TFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDK 111
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 29/36 (80%), Gaps = 1/36 (2%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
Y+APE ++SS Y+TP D+W+VGCIFAEM KPLF
Sbjct: 185 YRAPEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLF 219
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 63/102 (61%), Gaps = 9/102 (8%)
Query: 40 DWNYKVVEKIGQGVFGEVYKCLNLETGKK-VAIKMINIQNEPEGVPSYLIAGVSLLKEL- 97
D Y+ V +IG+G +G+V+K +L+ G + VA+K + +Q EG+P I V++L+ L
Sbjct: 10 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLE 69
Query: 98 --EHDNIVRLLDVLTTGRY-----VYLVFEYLDLDLGSFIRK 132
EH N+VRL DV T R + LVFE++D DL +++ K
Sbjct: 70 TFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDK 111
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 29/36 (80%), Gaps = 1/36 (2%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
Y+APE ++SS Y+TP D+W+VGCIFAEM KPLF
Sbjct: 185 YRAPEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLF 219
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 66/109 (60%), Gaps = 12/109 (11%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y+ + KIGQG FGEV+K + +TG+KVA+K + ++NE EG P + + +L+ L+H+N+
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENV 79
Query: 103 VRLLDVLTTGR--------YVYLVFEYLDLDLGSFIR----KHTITSIR 139
V L+++ T +YLVF++ + DL + K T++ I+
Sbjct: 80 VNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIK 128
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPCGKKDH-LSLIVRYFTALT 203
Y+ PE + Y P D+W GCI AEM + P+ + H L+LI + ++T
Sbjct: 195 YRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSIT 250
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 71.6 bits (174), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 63/102 (61%), Gaps = 9/102 (8%)
Query: 40 DWNYKVVEKIGQGVFGEVYKCLNLETGKK-VAIKMINIQNEPEGVPSYLIAGVSLLKEL- 97
D Y+ V +IG+G +G+V+K +L+ G + VA+K + +Q EG+P I V++L+ L
Sbjct: 10 DQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLE 69
Query: 98 --EHDNIVRLLDVLTTGRY-----VYLVFEYLDLDLGSFIRK 132
EH N+VRL DV T R + LVFE++D DL +++ K
Sbjct: 70 TFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDK 111
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 29/36 (80%), Gaps = 1/36 (2%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
Y+APE ++SS Y+TP D+W+VGCIFAEM KPLF
Sbjct: 185 YRAPEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLF 219
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 71.2 bits (173), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 66/109 (60%), Gaps = 12/109 (11%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y+ + KIGQG FGEV+K + +TG+KVA+K + ++NE EG P + + +L+ L+H+N+
Sbjct: 19 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENV 78
Query: 103 VRLLDVLTTGR--------YVYLVFEYLDLDLGSFIR----KHTITSIR 139
V L+++ T +YLVF++ + DL + K T++ I+
Sbjct: 79 VNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIK 127
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPCGKKDH-LSLIVRYFTALT 203
Y+ PE + Y P D+W GCI AEM + P+ + H L+LI + ++T
Sbjct: 194 YRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSIT 249
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 66/109 (60%), Gaps = 12/109 (11%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y+ + KIGQG FGEV+K + +TG+KVA+K + ++NE EG P + + +L+ L+H+N+
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENV 79
Query: 103 VRLLDVLTT--------GRYVYLVFEYLDLDLGSFIR----KHTITSIR 139
V L+++ T +YLVF++ + DL + K T++ I+
Sbjct: 80 VNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIK 128
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPCGKKDH-LSLIVRYFTALT 203
Y+ PE + Y P D+W GCI AEM + P+ + H L+LI + ++T
Sbjct: 195 YRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSIT 250
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 66/109 (60%), Gaps = 12/109 (11%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y+ + KIGQG FGEV+K + +TG+KVA+K + ++NE EG P + + +L+ L+H+N+
Sbjct: 20 YEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENV 79
Query: 103 VRLLDVLTTGR--------YVYLVFEYLDLDLGSFIR----KHTITSIR 139
V L+++ T +YLVF++ + DL + K T++ I+
Sbjct: 80 VNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIK 128
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPCGKKDH-LSLIVRYFTALT 203
Y+ PE + Y P D+W GCI AEM + P+ + H L+LI + ++T
Sbjct: 195 YRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSIT 250
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 59/99 (59%), Gaps = 8/99 (8%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKEL---E 98
Y+ V +IG G +G VYK + +G VA+K + + N EG+P + V+LL+ L E
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFE 64
Query: 99 HDNIVRLLDVLTTGRY-----VYLVFEYLDLDLGSFIRK 132
H N+VRL+DV T R V LVFE++D DL +++ K
Sbjct: 65 HPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDK 103
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 32/42 (76%), Gaps = 2/42 (4%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPCGKKD 190
Y+APE ++S+ Y+TP D+W+VGCIFAEM KPLF CG +
Sbjct: 177 YRAPEVLLQST-YATPVDMWSVGCIFAEMFRRKPLF-CGNSE 216
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 59/99 (59%), Gaps = 8/99 (8%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKEL---E 98
Y+ V +IG G +G VYK + +G VA+K + + N EG+P + V+LL+ L E
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFE 64
Query: 99 HDNIVRLLDVLTTGRY-----VYLVFEYLDLDLGSFIRK 132
H N+VRL+DV T R V LVFE++D DL +++ K
Sbjct: 65 HPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDK 103
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 32/42 (76%), Gaps = 2/42 (4%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPCGKKD 190
Y+APE ++S+ Y+TP D+W+VGCIFAEM KPLF CG +
Sbjct: 177 YRAPEVLLQST-YATPVDMWSVGCIFAEMFRRKPLF-CGNSE 216
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 71.2 bits (173), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 59/99 (59%), Gaps = 8/99 (8%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKEL---E 98
Y+ V +IG G +G VYK + +G VA+K + + N EG+P + V+LL+ L E
Sbjct: 5 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFE 64
Query: 99 HDNIVRLLDVLTTGRY-----VYLVFEYLDLDLGSFIRK 132
H N+VRL+DV T R V LVFE++D DL +++ K
Sbjct: 65 HPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDK 103
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 32/42 (76%), Gaps = 2/42 (4%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPCGKKD 190
Y+APE ++S+ Y+TP D+W+VGCIFAEM KPLF CG +
Sbjct: 177 YRAPEVLLQST-YATPVDMWSVGCIFAEMFRRKPLF-CGNSE 216
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 63.9 bits (154), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 92/216 (42%), Gaps = 63/216 (29%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN--IQNEPEGVPSYLIAGVSLLKELEHD 100
Y+ + +G G +G V + +TG +VA+K ++ Q+ +Y + LLK ++H+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHE 81
Query: 101 NIVRLLDVLTTGRY------VYLVFEYLDLDLGSFIRKHTIT------------------ 136
N++ LLDV T R VYLV + DL + ++ +T
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 141
Query: 137 --------SIRP--------------------HIKEVGSPY------KAPESRIRSSVYS 162
++P H + + Y +APE + + Y+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNAMHYN 201
Query: 163 TPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVR 197
D+W+VGCI AE+++G+ LFP D L LI+R
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 63.5 bits (153), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 91/216 (42%), Gaps = 63/216 (29%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN--IQNEPEGVPSYLIAGVSLLKELEHD 100
Y+ + +G G +G V + +TG +VA+K ++ Q+ +Y + LLK ++H+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHE 81
Query: 101 NIVRLLDVLTTGRY------VYLVFEYLDLDLGSFIRKHTIT------------------ 136
N++ LLDV T R VYLV + DL + ++ +T
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRGLKYI 141
Query: 137 --------SIRP--------------------HIKEVGSPY------KAPESRIRSSVYS 162
++P H + + Y +APE + Y+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 163 TPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVR 197
D+W+VGCI AE+++G+ LFP D L LI+R
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 63.5 bits (153), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 91/216 (42%), Gaps = 63/216 (29%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN--IQNEPEGVPSYLIAGVSLLKELEHD 100
Y+ + +G G +G V + +TG +VA+K ++ Q+ +Y + LLK ++H+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHE 81
Query: 101 NIVRLLDVLTTGRY------VYLVFEYLDLDLGSFIRKHTIT------------------ 136
N++ LLDV T R VYLV + DL + ++ +T
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYI 141
Query: 137 --------SIRP--------------------HIKEVGSPY------KAPESRIRSSVYS 162
++P H + + Y +APE + Y+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 163 TPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVR 197
D+W+VGCI AE+++G+ LFP D L LI+R
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 91/216 (42%), Gaps = 63/216 (29%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN--IQNEPEGVPSYLIAGVSLLKELEHD 100
Y+ + +G G +G V + +TG +VA+K ++ Q+ +Y + LLK ++H+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHE 81
Query: 101 NIVRLLDVLTTGRY------VYLVFEYLDLDLGSFIRKHTIT------------------ 136
N++ LLDV T R VYLV + DL + ++ +T
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYI 141
Query: 137 --------SIRP--------------------HIKEVGSPY------KAPESRIRSSVYS 162
++P H + + Y +APE + Y+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 163 TPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVR 197
D+W+VGCI AE+++G+ LFP D L LI+R
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 88/214 (41%), Gaps = 59/214 (27%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y+ + +G G +G V + +TG +VA+K ++ + + LLK ++H+N+
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 79
Query: 103 VRLLDVLTTGRY------VYLVFEYLDLDLGSFIRKHTIT-------------------- 136
+ LLDV T R VYLV + DL + ++ +T
Sbjct: 80 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 139
Query: 137 ------SIRP--------------------HIKEVGSPY------KAPESRIRSSVYSTP 164
++P H + + Y +APE + Y+
Sbjct: 140 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT 199
Query: 165 HDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVR 197
D+W+VGCI AE+++G+ LFP D L LI+R
Sbjct: 200 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 233
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 88/214 (41%), Gaps = 59/214 (27%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y+ + +G G +G V + +TG +VA+K ++ + + LLK ++H+N+
Sbjct: 44 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 103
Query: 103 VRLLDVLTTGRY------VYLVFEYLDLDLGSFIRKHTIT-------------------- 136
+ LLDV T R VYLV + DL + ++ +T
Sbjct: 104 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 163
Query: 137 ------SIRP--------------------HIKEVGSPY------KAPESRIRSSVYSTP 164
++P H + + Y +APE + Y+
Sbjct: 164 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT 223
Query: 165 HDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVR 197
D+W+VGCI AE+++G+ LFP D L LI+R
Sbjct: 224 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 257
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 91/216 (42%), Gaps = 63/216 (29%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN--IQNEPEGVPSYLIAGVSLLKELEHD 100
Y+ + +G G +G V + +TG +VA+K ++ Q+ +Y + LLK ++H+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHE 81
Query: 101 NIVRLLDVLTTGRY------VYLVFEYLDLDLGSFIRKHTIT------------------ 136
N++ LLDV T R VYLV + DL + ++ +T
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 141
Query: 137 --------SIRP--------------------HIKEVGSPY------KAPESRIRSSVYS 162
++P H + + Y +APE + Y+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 163 TPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVR 197
D+W+VGCI AE+++G+ LFP D L LI+R
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 91/216 (42%), Gaps = 63/216 (29%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN--IQNEPEGVPSYLIAGVSLLKELEHD 100
Y+ + +G G +G V + +TG +VA+K ++ Q+ +Y + LLK ++H+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHE 81
Query: 101 NIVRLLDVLTTGRY------VYLVFEYLDLDLGSFIRKHTIT------------------ 136
N++ LLDV T R VYLV + DL + ++ +T
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 141
Query: 137 --------SIRP--------------------HIKEVGSPY------KAPESRIRSSVYS 162
++P H + + Y +APE + Y+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 163 TPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVR 197
D+W+VGCI AE+++G+ LFP D L LI+R
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 88/214 (41%), Gaps = 59/214 (27%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y+ + +G G +G V + +TG +VA+K ++ + + LLK ++H+N+
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 89
Query: 103 VRLLDVLTTGRY------VYLVFEYLDLDLGSFIRKHTIT-------------------- 136
+ LLDV T R VYLV + DL + ++ +T
Sbjct: 90 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 149
Query: 137 ------SIRP--------------------HIKEVGSPY------KAPESRIRSSVYSTP 164
++P H + + Y +APE + Y+
Sbjct: 150 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT 209
Query: 165 HDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVR 197
D+W+VGCI AE+++G+ LFP D L LI+R
Sbjct: 210 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 243
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 88/214 (41%), Gaps = 59/214 (27%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y+ + +G G +G V + +TG +VA+K ++ + + LLK ++H+N+
Sbjct: 34 YQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 93
Query: 103 VRLLDVLTTGRY------VYLVFEYLDLDLGSFIRKHTIT-------------------- 136
+ LLDV T R VYLV + DL + ++ +T
Sbjct: 94 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 153
Query: 137 ------SIRP--------------------HIKEVGSPY------KAPESRIRSSVYSTP 164
++P H + + Y +APE + Y+
Sbjct: 154 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT 213
Query: 165 HDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVR 197
D+W+VGCI AE+++G+ LFP D L LI+R
Sbjct: 214 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 247
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 91/216 (42%), Gaps = 63/216 (29%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN--IQNEPEGVPSYLIAGVSLLKELEHD 100
Y+ + IG G +G V + +TG +VA+K ++ Q+ +Y + LLK ++H+
Sbjct: 29 YQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHE 86
Query: 101 NIVRLLDVLTTGRY------VYLVFEYLDLDLGSFIRKHTIT------------------ 136
N++ LLDV T R VYLV + DL + ++ +T
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 146
Query: 137 --------SIRP--------------------HIKEVGSPY------KAPESRIRSSVYS 162
++P H + + Y +APE + Y+
Sbjct: 147 HSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 206
Query: 163 TPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVR 197
D+W+VGCI AE+++G+ LFP D L LI+R
Sbjct: 207 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 242
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 88/214 (41%), Gaps = 59/214 (27%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y+ + +G G +G V + +TG +VA+K ++ + + LLK ++H+N+
Sbjct: 43 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 102
Query: 103 VRLLDVLTTGRY------VYLVFEYLDLDLGSFIRKHTIT-------------------- 136
+ LLDV T R VYLV + DL + ++ +T
Sbjct: 103 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 162
Query: 137 ------SIRP--------------------HIKEVGSPY------KAPESRIRSSVYSTP 164
++P H + + Y +APE + Y+
Sbjct: 163 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT 222
Query: 165 HDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVR 197
D+W+VGCI AE+++G+ LFP D L LI+R
Sbjct: 223 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 256
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 91/216 (42%), Gaps = 63/216 (29%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN--IQNEPEGVPSYLIAGVSLLKELEHD 100
Y+ + +G G +G V + +TG +VA+K ++ Q+ +Y + LLK ++H+
Sbjct: 29 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHE 86
Query: 101 NIVRLLDVLTTGRY------VYLVFEYLDLDLGSFIRKHTIT------------------ 136
N++ LLDV T R VYLV + DL + ++ +T
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 146
Query: 137 --------SIRP--------------------HIKEVGSPY------KAPESRIRSSVYS 162
++P H + + Y +APE + Y+
Sbjct: 147 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 206
Query: 163 TPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVR 197
D+W+VGCI AE+++G+ LFP D L LI+R
Sbjct: 207 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 242
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 91/216 (42%), Gaps = 63/216 (29%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN--IQNEPEGVPSYLIAGVSLLKELEHD 100
Y+ + +G G +G V + +TG +VA+K ++ Q+ +Y + LLK ++H+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHE 81
Query: 101 NIVRLLDVLTTGRY------VYLVFEYLDLDLGSFIRKHTIT------------------ 136
N++ LLDV T R VYLV + DL + ++ +T
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 141
Query: 137 --------SIRP--------------------HIKEVGSPY------KAPESRIRSSVYS 162
++P H + + Y +APE + Y+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 163 TPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVR 197
D+W+VGCI AE+++G+ LFP D L LI+R
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 91/216 (42%), Gaps = 63/216 (29%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN--IQNEPEGVPSYLIAGVSLLKELEHD 100
Y+ + +G G +G V + +TG +VA+K ++ Q+ +Y + LLK ++H+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHE 81
Query: 101 NIVRLLDVLTTGRY------VYLVFEYLDLDLGSFIRKHTIT------------------ 136
N++ LLDV T R VYLV + DL + ++ +T
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 141
Query: 137 --------SIRP--------------------HIKEVGSPY------KAPESRIRSSVYS 162
++P H + + Y +APE + Y+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 163 TPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVR 197
D+W+VGCI AE+++G+ LFP D L LI+R
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 91/216 (42%), Gaps = 63/216 (29%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN--IQNEPEGVPSYLIAGVSLLKELEHD 100
Y+ + +G G +G V + +TG +VA+K ++ Q+ +Y + LLK ++H+
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHE 88
Query: 101 NIVRLLDVLTTGRY------VYLVFEYLDLDLGSFIRKHTIT------------------ 136
N++ LLDV T R VYLV + DL + ++ +T
Sbjct: 89 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 148
Query: 137 --------SIRP--------------------HIKEVGSPY------KAPESRIRSSVYS 162
++P H + + Y +APE + Y+
Sbjct: 149 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYN 208
Query: 163 TPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVR 197
D+W+VGCI AE+++G+ LFP D L LI+R
Sbjct: 209 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 244
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 91/216 (42%), Gaps = 63/216 (29%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN--IQNEPEGVPSYLIAGVSLLKELEHD 100
Y+ + +G G +G V + +TG +VA+K ++ Q+ +Y + LLK ++H+
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHE 77
Query: 101 NIVRLLDVLTTGRY------VYLVFEYLDLDLGSFIRKHTIT------------------ 136
N++ LLDV T R VYLV + DL + ++ +T
Sbjct: 78 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 137
Query: 137 --------SIRP--------------------HIKEVGSPY------KAPESRIRSSVYS 162
++P H + + Y +APE + Y+
Sbjct: 138 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 197
Query: 163 TPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVR 197
D+W+VGCI AE+++G+ LFP D L LI+R
Sbjct: 198 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 233
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 88/214 (41%), Gaps = 59/214 (27%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y+ + +G G +G V + +TG +VA+K ++ + + LLK ++H+N+
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 89
Query: 103 VRLLDVLTTGRY------VYLVFEYLDLDLGSFIRKHTIT-------------------- 136
+ LLDV T R VYLV + DL + ++ +T
Sbjct: 90 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 149
Query: 137 ------SIRP--------------------HIKEVGSPY------KAPESRIRSSVYSTP 164
++P H + + Y +APE + Y+
Sbjct: 150 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT 209
Query: 165 HDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVR 197
D+W+VGCI AE+++G+ LFP D L LI+R
Sbjct: 210 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 243
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 91/216 (42%), Gaps = 63/216 (29%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN--IQNEPEGVPSYLIAGVSLLKELEHD 100
Y+ + +G G +G V + +TG +VA+K ++ Q+ +Y + LLK ++H+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHE 81
Query: 101 NIVRLLDVLTTGRY------VYLVFEYLDLDLGSFIRKHTIT------------------ 136
N++ LLDV T R VYLV + DL + ++ +T
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 141
Query: 137 --------SIRP--------------------HIKEVGSPY------KAPESRIRSSVYS 162
++P H + + Y +APE + Y+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 163 TPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVR 197
D+W+VGCI AE+++G+ LFP D L LI+R
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 91/216 (42%), Gaps = 63/216 (29%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN--IQNEPEGVPSYLIAGVSLLKELEHD 100
Y+ + +G G +G V + +TG +VA+K ++ Q+ +Y + LLK ++H+
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHE 88
Query: 101 NIVRLLDVLTTGRY------VYLVFEYLDLDLGSFIRKHTIT------------------ 136
N++ LLDV T R VYLV + DL + ++ +T
Sbjct: 89 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 148
Query: 137 --------SIRP--------------------HIKEVGSPY------KAPESRIRSSVYS 162
++P H + + Y +APE + Y+
Sbjct: 149 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 208
Query: 163 TPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVR 197
D+W+VGCI AE+++G+ LFP D L LI+R
Sbjct: 209 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 244
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 88/214 (41%), Gaps = 59/214 (27%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y+ + +G G +G V + +TG +VA+K ++ + + LLK ++H+N+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 103 VRLLDVLTTGRY------VYLVFEYLDLDLGSFIRKHTIT-------------------- 136
+ LLDV T R VYLV + DL + ++ +T
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 137 ------SIRP--------------------HIKEVGSPY------KAPESRIRSSVYSTP 164
++P H + + Y +APE + Y+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT 203
Query: 165 HDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVR 197
D+W+VGCI AE+++G+ LFP D L LI+R
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 91/216 (42%), Gaps = 63/216 (29%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN--IQNEPEGVPSYLIAGVSLLKELEHD 100
Y+ + +G G +G V + +TG +VA+K ++ Q+ +Y + LLK ++H+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHE 81
Query: 101 NIVRLLDVLTTGRY------VYLVFEYLDLDLGSFIRKHTIT------------------ 136
N++ LLDV T R VYLV + DL + ++ +T
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 141
Query: 137 --------SIRP--------------------HIKEVGSPY------KAPESRIRSSVYS 162
++P H + + Y +APE + Y+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 163 TPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVR 197
D+W+VGCI AE+++G+ LFP D L LI+R
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 91/216 (42%), Gaps = 63/216 (29%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN--IQNEPEGVPSYLIAGVSLLKELEHD 100
Y+ + +G G +G V + +TG +VA+K ++ Q+ +Y + LLK ++H+
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHE 88
Query: 101 NIVRLLDVLTTGRY------VYLVFEYLDLDLGSFIRKHTIT------------------ 136
N++ LLDV T R VYLV + DL + ++ +T
Sbjct: 89 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 148
Query: 137 --------SIRP--------------------HIKEVGSPY------KAPESRIRSSVYS 162
++P H + + Y +APE + Y+
Sbjct: 149 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYN 208
Query: 163 TPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVR 197
D+W+VGCI AE+++G+ LFP D L LI+R
Sbjct: 209 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 244
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 91/216 (42%), Gaps = 63/216 (29%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN--IQNEPEGVPSYLIAGVSLLKELEHD 100
Y+ + +G G +G V + +TG +VA+K ++ Q+ +Y + LLK ++H+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHE 81
Query: 101 NIVRLLDVLTTGRY------VYLVFEYLDLDLGSFIRKHTIT------------------ 136
N++ LLDV T R VYLV + DL + ++ +T
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 141
Query: 137 --------SIRP--------------------HIKEVGSPY------KAPESRIRSSVYS 162
++P H + + Y +APE + Y+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 163 TPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVR 197
D+W+VGCI AE+++G+ LFP D L LI+R
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 88/214 (41%), Gaps = 59/214 (27%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y+ + +G G +G V + +TG +VA+K ++ + + LLK ++H+N+
Sbjct: 36 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 95
Query: 103 VRLLDVLTTGRY------VYLVFEYLDLDLGSFIRKHTIT-------------------- 136
+ LLDV T R VYLV + DL + ++ +T
Sbjct: 96 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 155
Query: 137 ------SIRP--------------------HIKEVGSPY------KAPESRIRSSVYSTP 164
++P H + + Y +APE + Y+
Sbjct: 156 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT 215
Query: 165 HDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVR 197
D+W+VGCI AE+++G+ LFP D L LI+R
Sbjct: 216 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 249
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 91/216 (42%), Gaps = 63/216 (29%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN--IQNEPEGVPSYLIAGVSLLKELEHD 100
Y+ + +G G +G V + +TG +VA+K ++ Q+ +Y + LLK ++H+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHE 81
Query: 101 NIVRLLDVLTTGRY------VYLVFEYLDLDLGSFIRKHTIT------------------ 136
N++ LLDV T R VYLV + DL + ++ +T
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 141
Query: 137 --------SIRP--------------------HIKEVGSPY------KAPESRIRSSVYS 162
++P H + + Y +APE + Y+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 163 TPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVR 197
D+W+VGCI AE+++G+ LFP D L LI+R
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 88/214 (41%), Gaps = 59/214 (27%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y+ + +G G +G V + +TG +VA+K ++ + + LLK ++H+N+
Sbjct: 36 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENV 95
Query: 103 VRLLDVLTTGRY------VYLVFEYLDLDLGSFIRKHTIT-------------------- 136
+ LLDV T R VYLV + DL + ++ +T
Sbjct: 96 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 155
Query: 137 ------SIRP--------------------HIKEVGSPY------KAPESRIRSSVYSTP 164
++P H + + Y +APE + Y+
Sbjct: 156 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT 215
Query: 165 HDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVR 197
D+W+VGCI AE+++G+ LFP D L LI+R
Sbjct: 216 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 249
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 88/214 (41%), Gaps = 59/214 (27%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y+ + +G G +G V + +TG +VA+K ++ + + LLK ++H+N+
Sbjct: 36 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 95
Query: 103 VRLLDVLTTGRY------VYLVFEYLDLDLGSFIRKHTIT-------------------- 136
+ LLDV T R VYLV + DL + ++ +T
Sbjct: 96 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 155
Query: 137 ------SIRP--------------------HIKEVGSPY------KAPESRIRSSVYSTP 164
++P H + + Y +APE + Y+
Sbjct: 156 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT 215
Query: 165 HDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVR 197
D+W+VGCI AE+++G+ LFP D L LI+R
Sbjct: 216 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 249
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 91/216 (42%), Gaps = 63/216 (29%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN--IQNEPEGVPSYLIAGVSLLKELEHD 100
Y+ + +G G +G V + +TG +VA+K ++ Q+ +Y + LLK ++H+
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHE 87
Query: 101 NIVRLLDVLTTGRY------VYLVFEYLDLDLGSFIRKHTIT------------------ 136
N++ LLDV T R VYLV + DL + ++ +T
Sbjct: 88 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 147
Query: 137 --------SIRP--------------------HIKEVGSPY------KAPESRIRSSVYS 162
++P H + + Y +APE + Y+
Sbjct: 148 HSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 207
Query: 163 TPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVR 197
D+W+VGCI AE+++G+ LFP D L LI+R
Sbjct: 208 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 243
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 88/214 (41%), Gaps = 59/214 (27%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y+ + +G G +G V + +TG +VA+K ++ + + LLK ++H+N+
Sbjct: 21 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 80
Query: 103 VRLLDVLTTGRY------VYLVFEYLDLDLGSFIRKHTIT-------------------- 136
+ LLDV T R VYLV + DL + ++ +T
Sbjct: 81 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 140
Query: 137 ------SIRP--------------------HIKEVGSPY------KAPESRIRSSVYSTP 164
++P H + + Y +APE + Y+
Sbjct: 141 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT 200
Query: 165 HDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVR 197
D+W+VGCI AE+++G+ LFP D L LI+R
Sbjct: 201 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 234
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 91/216 (42%), Gaps = 63/216 (29%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN--IQNEPEGVPSYLIAGVSLLKELEHD 100
Y+ + +G G +G V + +TG +VA+K ++ Q+ +Y + LLK ++H+
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHE 83
Query: 101 NIVRLLDVLTTGRY------VYLVFEYLDLDLGSFIRKHTIT------------------ 136
N++ LLDV T R VYLV + DL + ++ +T
Sbjct: 84 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 143
Query: 137 --------SIRP--------------------HIKEVGSPY------KAPESRIRSSVYS 162
++P H + + Y +APE + Y+
Sbjct: 144 HSADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 203
Query: 163 TPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVR 197
D+W+VGCI AE+++G+ LFP D L LI+R
Sbjct: 204 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 239
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 88/214 (41%), Gaps = 59/214 (27%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y+ + +G G +G V + +TG +VA+K ++ + + LLK ++H+N+
Sbjct: 22 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 81
Query: 103 VRLLDVLTTGRY------VYLVFEYLDLDLGSFIRKHTIT-------------------- 136
+ LLDV T R VYLV + DL + ++ +T
Sbjct: 82 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 141
Query: 137 ------SIRP--------------------HIKEVGSPY------KAPESRIRSSVYSTP 164
++P H + + Y +APE + Y+
Sbjct: 142 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT 201
Query: 165 HDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVR 197
D+W+VGCI AE+++G+ LFP D L LI+R
Sbjct: 202 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 235
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 88/214 (41%), Gaps = 59/214 (27%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y+ + +G G +G V + +TG +VA+K ++ + + LLK ++H+N+
Sbjct: 47 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 106
Query: 103 VRLLDVLTTGRY------VYLVFEYLDLDLGSFIRKHTIT-------------------- 136
+ LLDV T R VYLV + DL + ++ +T
Sbjct: 107 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 166
Query: 137 ------SIRP--------------------HIKEVGSPY------KAPESRIRSSVYSTP 164
++P H + + Y +APE + Y+
Sbjct: 167 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT 226
Query: 165 HDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVR 197
D+W+VGCI AE+++G+ LFP D L LI+R
Sbjct: 227 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 260
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 91/216 (42%), Gaps = 63/216 (29%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN--IQNEPEGVPSYLIAGVSLLKELEHD 100
Y+ + +G G +G V + +TG +VA+K ++ Q+ +Y + LLK ++H+
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHE 83
Query: 101 NIVRLLDVLTTGRY------VYLVFEYLDLDLGSFIRKHTIT------------------ 136
N++ LLDV T R VYLV + DL + ++ +T
Sbjct: 84 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 143
Query: 137 --------SIRP--------------------HIKEVGSPY------KAPESRIRSSVYS 162
++P H + + Y +APE + Y+
Sbjct: 144 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 203
Query: 163 TPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVR 197
D+W+VGCI AE+++G+ LFP D L LI+R
Sbjct: 204 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 239
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 91/216 (42%), Gaps = 63/216 (29%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN--IQNEPEGVPSYLIAGVSLLKELEHD 100
Y+ + +G G +G V + +TG +VA+K ++ Q+ +Y + LLK ++H+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHE 81
Query: 101 NIVRLLDVLTTGRY------VYLVFEYLDLDLGSFIRKHTIT------------------ 136
N++ LLDV T R VYLV + DL + ++ +T
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 141
Query: 137 --------SIRP--------------------HIKEVGSPY------KAPESRIRSSVYS 162
++P H + + Y +APE + Y+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 163 TPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVR 197
D+W+VGCI AE+++G+ LFP D L LI+R
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 88/214 (41%), Gaps = 59/214 (27%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y+ + +G G +G V + +TG +VA+K ++ + + LLK ++H+N+
Sbjct: 44 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 103
Query: 103 VRLLDVLTTGRY------VYLVFEYLDLDLGSFIRKHTIT-------------------- 136
+ LLDV T R VYLV + DL + ++ +T
Sbjct: 104 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 163
Query: 137 ------SIRP--------------------HIKEVGSPY------KAPESRIRSSVYSTP 164
++P H + + Y +APE + Y+
Sbjct: 164 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT 223
Query: 165 HDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVR 197
D+W+VGCI AE+++G+ LFP D L LI+R
Sbjct: 224 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 257
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 91/216 (42%), Gaps = 63/216 (29%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN--IQNEPEGVPSYLIAGVSLLKELEHD 100
Y+ + +G G +G V + +TG +VA+K ++ Q+ +Y + LLK ++H+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHE 81
Query: 101 NIVRLLDVLTTGRY------VYLVFEYLDLDLGSFIRKHTIT------------------ 136
N++ LLDV T R VYLV + DL + ++ +T
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 141
Query: 137 --------SIRP--------------------HIKEVGSPY------KAPESRIRSSVYS 162
++P H + + Y +APE + Y+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 163 TPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVR 197
D+W+VGCI AE+++G+ LFP D L LI+R
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 91/216 (42%), Gaps = 63/216 (29%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN--IQNEPEGVPSYLIAGVSLLKELEHD 100
Y+ + +G G +G V + +TG +VA+K ++ Q+ +Y + LLK ++H+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHE 81
Query: 101 NIVRLLDVLTTGRY------VYLVFEYLDLDLGSFIRKHTIT------------------ 136
N++ LLDV T R VYLV + DL + ++ +T
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 141
Query: 137 --------SIRP--------------------HIKEVGSPY------KAPESRIRSSVYS 162
++P H + + Y +APE + Y+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 163 TPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVR 197
D+W+VGCI AE+++G+ LFP D L LI+R
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 91/216 (42%), Gaps = 63/216 (29%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN--IQNEPEGVPSYLIAGVSLLKELEHD 100
Y+ + +G G +G V + +TG +VA+K ++ Q+ +Y + LLK ++H+
Sbjct: 29 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHE 86
Query: 101 NIVRLLDVLTTGRY------VYLVFEYLDLDLGSFIRKHTIT------------------ 136
N++ LLDV T R VYLV + DL + ++ +T
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 146
Query: 137 --------SIRP--------------------HIKEVGSPY------KAPESRIRSSVYS 162
++P H + + Y +APE + Y+
Sbjct: 147 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 206
Query: 163 TPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVR 197
D+W+VGCI AE+++G+ LFP D L LI+R
Sbjct: 207 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 242
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 91/216 (42%), Gaps = 63/216 (29%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN--IQNEPEGVPSYLIAGVSLLKELEHD 100
Y+ + +G G +G V + +TG +VA+K ++ Q+ +Y + LLK ++H+
Sbjct: 23 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHE 80
Query: 101 NIVRLLDVLTTGRY------VYLVFEYLDLDLGSFIRKHTIT------------------ 136
N++ LLDV T R VYLV + DL + ++ +T
Sbjct: 81 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 140
Query: 137 --------SIRP--------------------HIKEVGSPY------KAPESRIRSSVYS 162
++P H + + Y +APE + Y+
Sbjct: 141 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 200
Query: 163 TPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVR 197
D+W+VGCI AE+++G+ LFP D L LI+R
Sbjct: 201 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 236
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 88/214 (41%), Gaps = 59/214 (27%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y+ + +G G +G V + +TG +VA+K ++ + + LLK ++H+N+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 103 VRLLDVLTTGRY------VYLVFEYLDLDLGSFIRKHTIT-------------------- 136
+ LLDV T R VYLV + DL + ++ +T
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 137 ------SIRP--------------------HIKEVGSPY------KAPESRIRSSVYSTP 164
++P H + + Y +APE + Y+
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT 203
Query: 165 HDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVR 197
D+W+VGCI AE+++G+ LFP D L LI+R
Sbjct: 204 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 88/214 (41%), Gaps = 59/214 (27%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y+ + +G G +G V + +TG +VA+K ++ + + LLK ++H+N+
Sbjct: 35 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 94
Query: 103 VRLLDVLTTGRY------VYLVFEYLDLDLGSFIRKHTIT-------------------- 136
+ LLDV T R VYLV + DL + ++ +T
Sbjct: 95 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 154
Query: 137 ------SIRP--------------------HIKEVGSPY------KAPESRIRSSVYSTP 164
++P H + + Y +APE + Y+
Sbjct: 155 ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT 214
Query: 165 HDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVR 197
D+W+VGCI AE+++G+ LFP D L LI+R
Sbjct: 215 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 248
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 91/216 (42%), Gaps = 63/216 (29%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN--IQNEPEGVPSYLIAGVSLLKELEHD 100
Y+ + +G G +G V + +TG +VA+K ++ Q+ +Y + LLK ++H+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHE 81
Query: 101 NIVRLLDVLTTGRY------VYLVFEYLDLDLGSFIRKHTIT------------------ 136
N++ LLDV T R VYLV + DL + ++ +T
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 141
Query: 137 --------SIRP--------------------HIKEVGSPY------KAPESRIRSSVYS 162
++P H + + Y +APE + Y+
Sbjct: 142 HSADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 201
Query: 163 TPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVR 197
D+W+VGCI AE+++G+ LFP D L LI+R
Sbjct: 202 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 88/214 (41%), Gaps = 59/214 (27%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y+ + +G G +G V + +TG +VA+K ++ + + LLK ++H+N+
Sbjct: 21 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 80
Query: 103 VRLLDVLTTGRY------VYLVFEYLDLDLGSFIRKHTIT-------------------- 136
+ LLDV T R VYLV + DL + ++ +T
Sbjct: 81 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 140
Query: 137 ------SIRP--------------------HIKEVGSPY------KAPESRIRSSVYSTP 164
++P H + + Y +APE + Y+
Sbjct: 141 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT 200
Query: 165 HDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVR 197
D+W+VGCI AE+++G+ LFP D L LI+R
Sbjct: 201 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 234
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 88/214 (41%), Gaps = 59/214 (27%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y+ + +G G +G V + +TG +VA+K ++ + + LLK ++H+N+
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 79
Query: 103 VRLLDVLTTGRY------VYLVFEYLDLDLGSFIRKHTIT-------------------- 136
+ LLDV T R VYLV + DL + ++ +T
Sbjct: 80 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQILRGLKYIHS 139
Query: 137 ------SIRP--------------------HIKEVGSPY------KAPESRIRSSVYSTP 164
++P H + + Y +APE + Y+
Sbjct: 140 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT 199
Query: 165 HDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVR 197
D+W+VGCI AE+++G+ LFP D L LI+R
Sbjct: 200 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 233
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 91/216 (42%), Gaps = 63/216 (29%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN--IQNEPEGVPSYLIAGVSLLKELEHD 100
Y+ + +G G +G V + +TG +VA+K ++ Q+ +Y + LLK ++H+
Sbjct: 29 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHE 86
Query: 101 NIVRLLDVLTTGRY------VYLVFEYLDLDLGSFIRKHTIT------------------ 136
N++ LLDV T R VYLV + DL + ++ +T
Sbjct: 87 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 146
Query: 137 --------SIRP--------------------HIKEVGSPY------KAPESRIRSSVYS 162
++P H + + Y +APE + Y+
Sbjct: 147 HSADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYN 206
Query: 163 TPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVR 197
D+W+VGCI AE+++G+ LFP D L LI+R
Sbjct: 207 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 242
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 88/214 (41%), Gaps = 59/214 (27%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y+ + +G G +G V + +TG +VA+K ++ + + LLK ++H+N+
Sbjct: 30 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 89
Query: 103 VRLLDVLTTGRY------VYLVFEYLDLDLGSFIRKHTIT-------------------- 136
+ LLDV T R VYLV + DL + ++ +T
Sbjct: 90 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 149
Query: 137 ------SIRP--------------------HIKEVGSPY------KAPESRIRSSVYSTP 164
++P H + + Y +APE + Y+
Sbjct: 150 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT 209
Query: 165 HDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVR 197
D+W+VGCI AE+++G+ LFP D L LI+R
Sbjct: 210 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 243
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 88/214 (41%), Gaps = 59/214 (27%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y+ + +G G +G V + +TG +VA+K ++ + + LLK ++H+N+
Sbjct: 35 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 94
Query: 103 VRLLDVLTTGRY------VYLVFEYLDLDLGSFIRKHTIT-------------------- 136
+ LLDV T R VYLV + DL + ++ +T
Sbjct: 95 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 154
Query: 137 ------SIRP--------------------HIKEVGSPY------KAPESRIRSSVYSTP 164
++P H + + Y +APE + Y+
Sbjct: 155 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT 214
Query: 165 HDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVR 197
D+W+VGCI AE+++G+ LFP D L LI+R
Sbjct: 215 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 248
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 91/216 (42%), Gaps = 63/216 (29%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN--IQNEPEGVPSYLIAGVSLLKELEHD 100
Y+ + +G G +G V + +TG +VA+K ++ Q+ +Y + LLK ++H+
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHE 88
Query: 101 NIVRLLDVLTTGRY------VYLVFEYLDLDLGSFIRKHTIT------------------ 136
N++ LLDV T R VYLV + DL + ++ +T
Sbjct: 89 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 148
Query: 137 --------SIRP--------------------HIKEVGSPY------KAPESRIRSSVYS 162
++P H + + Y +APE + Y+
Sbjct: 149 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIMLNWMHYN 208
Query: 163 TPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVR 197
D+W+VGCI AE+++G+ LFP D L LI+R
Sbjct: 209 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 244
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 88/214 (41%), Gaps = 59/214 (27%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y+ + +G G +G V + +TG +VA+K ++ + + LLK ++H+N+
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 85
Query: 103 VRLLDVLTTGRY------VYLVFEYLDLDLGSFIRKHTIT-------------------- 136
+ LLDV T R VYLV + DL + ++ +T
Sbjct: 86 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 145
Query: 137 ------SIRP--------------------HIKEVGSPY------KAPESRIRSSVYSTP 164
++P H + + Y +APE + Y+
Sbjct: 146 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT 205
Query: 165 HDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVR 197
D+W+VGCI AE+++G+ LFP D L LI+R
Sbjct: 206 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 239
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 88/214 (41%), Gaps = 59/214 (27%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y+ + +G G +G V + +TG +VA+K ++ + + LLK ++H+N+
Sbjct: 26 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 85
Query: 103 VRLLDVLTTGRY------VYLVFEYLDLDLGSFIRKHTIT-------------------- 136
+ LLDV T R VYLV + DL + ++ +T
Sbjct: 86 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 145
Query: 137 ------SIRP--------------------HIKEVGSPY------KAPESRIRSSVYSTP 164
++P H + + Y +APE + Y+
Sbjct: 146 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT 205
Query: 165 HDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVR 197
D+W+VGCI AE+++G+ LFP D L LI+R
Sbjct: 206 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 239
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 88/214 (41%), Gaps = 59/214 (27%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y+ + +G G +G V + +TG +VA+K ++ + + LLK ++H+N+
Sbjct: 43 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 102
Query: 103 VRLLDVLTTGRY------VYLVFEYLDLDLGSFIRKHTIT-------------------- 136
+ LLDV T R VYLV + DL + ++ +T
Sbjct: 103 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 162
Query: 137 ------SIRP--------------------HIKEVGSPY------KAPESRIRSSVYSTP 164
++P H + + Y +APE + Y+
Sbjct: 163 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQT 222
Query: 165 HDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVR 197
D+W+VGCI AE+++G+ LFP D L LI+R
Sbjct: 223 VDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 256
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 63/101 (62%), Gaps = 7/101 (6%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMI--NIQNEPEGVPSYLIAGVSLLKELE-H 99
Y++V+K+G+G +G V+K ++ TG+ VA+K I QN + ++ + +L EL H
Sbjct: 11 YELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTF--REIMILTELSGH 68
Query: 100 DNIVRLLDVL--TTGRYVYLVFEYLDLDLGSFIRKHTITSI 138
+NIV LL+VL R VYLVF+Y++ DL + IR + + +
Sbjct: 69 ENIVNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILEPV 109
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 27/37 (72%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFP 185
Y+APE + S+ Y+ D+W++GCI E++ GKP+FP
Sbjct: 196 YRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFP 232
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 60.8 bits (146), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 58/102 (56%), Gaps = 11/102 (10%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQN---EPEGVPSYLIAGVSLLKEL- 97
Y+ V +IG G +G VYK + +G VA+K + + N G+P + V+LL+ L
Sbjct: 10 RYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLE 69
Query: 98 --EHDNIVRLLDVLTTGRY-----VYLVFEYLDLDLGSFIRK 132
EH N+VRL+DV T R V LVFE++D DL +++ K
Sbjct: 70 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDK 111
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 32/42 (76%), Gaps = 2/42 (4%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPCGKKD 190
Y+APE ++S+ Y+TP D+W+VGCIFAEM KPLF CG +
Sbjct: 185 YRAPEVLLQST-YATPVDMWSVGCIFAEMFRRKPLF-CGNSE 224
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 60.5 bits (145), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 86/197 (43%), Gaps = 57/197 (28%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y EKIGQG G VY +++ TG++VAI+ +N+Q +P+ +I + +++E ++ NI
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK--KELIINEILVMRENKNPNI 80
Query: 103 VRLLDVLTTGRYVYLVFEYL---------------DLDLGSFIRK--------HTITSIR 139
V LD G +++V EYL + + + R+ H+ I
Sbjct: 81 VNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIH 140
Query: 140 PHIKE-------VGS---------PYKAPESRIRSSVYSTPH----------------DV 167
+IK GS PE RS++ TP+ D+
Sbjct: 141 RNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDI 200
Query: 168 WAVGCIFAEMVSGKPLF 184
W++G + EM+ G+P +
Sbjct: 201 WSLGIMAIEMIEGEPPY 217
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 85/197 (43%), Gaps = 57/197 (28%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y EKIGQG G VY +++ TG++VAI+ +N+Q +P+ +I + +++E ++ NI
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK--KELIINEILVMRENKNPNI 79
Query: 103 VRLLDVLTTGRYVYLVFEYL---------------DLDLGSFIRK--------HTITSIR 139
V LD G +++V EYL + + + R+ H+ I
Sbjct: 80 VNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIH 139
Query: 140 PHIKE-------VGS---------PYKAPESRIRSSVYSTPH----------------DV 167
IK GS PE RS++ TP+ D+
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDI 199
Query: 168 WAVGCIFAEMVSGKPLF 184
W++G + EM+ G+P +
Sbjct: 200 WSLGIMAIEMIEGEPPY 216
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 89/216 (41%), Gaps = 63/216 (29%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN--IQNEPEGVPSYLIAGVSLLKELEHD 100
Y+ + +G G +G V + +TG +VA+K ++ Q+ +Y + LLK ++H+
Sbjct: 47 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHE 104
Query: 101 NIVRLLDVLTTGRY------VYLVFEYLDLDLGSFIRKHTIT------------------ 136
N++ LLDV T R VYLV + DL + ++ +T
Sbjct: 105 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYI 164
Query: 137 --------SIRP--------------------HIKEVGSPYKA------PESRIRSSVYS 162
++P H + Y A PE + Y+
Sbjct: 165 HSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATRWYRAPEIMLNWMHYN 224
Query: 163 TPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVR 197
D+W+VGCI AE+++G+ LFP D L LI+R
Sbjct: 225 QTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 260
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y EKIGQG G VY +++ TG++VAI+ +N+Q +P+ +I + +++E ++ NI
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK--KELIINEILVMRENKNPNI 79
Query: 103 VRLLDVLTTGRYVYLVFEYL 122
V LD G +++V EYL
Sbjct: 80 VNYLDSYLVGDELWVVMEYL 99
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y EKIGQG G VY +++ TG++VAI+ +N+Q +P+ +I + +++E ++ NI
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK--KELIINEILVMRENKNPNI 80
Query: 103 VRLLDVLTTGRYVYLVFEYL 122
V LD G +++V EYL
Sbjct: 81 VNYLDSYLVGDELWVVMEYL 100
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Query: 145 VGSPY-KAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
VG+PY APE R + Y D+W++G + EM+ G+P +
Sbjct: 178 VGTPYWMAPEVVTRKA-YGPKVDIWSLGIMAIEMIEGEPPY 217
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y EKIGQG G VY +++ TG++VAI+ +N+Q +P+ +I + +++E ++ NI
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPK--KELIINEILVMRENKNPNI 79
Query: 103 VRLLDVLTTGRYVYLVFEYL 122
V LD G +++V EYL
Sbjct: 80 VNYLDSYLVGDELWVVMEYL 99
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%), Gaps = 2/41 (4%)
Query: 145 VGSPY-KAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
VG+PY APE R + Y D+W++G + EM+ G+P +
Sbjct: 177 VGTPYWMAPEVVTRKA-YGPKVDIWSLGIMAIEMIEGEPPY 216
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 57.8 bits (138), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 85/208 (40%), Gaps = 63/208 (30%)
Query: 49 IGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRLLDV 108
+G G +G V ++ +G+KVAIK ++ + E + LLK ++H+N++ LLDV
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 109 LTTG-------------------------------RYVYLVFEYL--------------D 123
T + YLV++ L D
Sbjct: 92 FTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAGVVHRD 151
Query: 124 LDLGSF--------------IRKHTITSIRPHIKEVGSPYKAPESRIRSSVYSTPHDVWA 169
L G+ + +H + ++ V Y+APE + Y+ D+W+
Sbjct: 152 LKPGNLAVNEDCELKILDFGLARHADAEMTGYV--VTRWYRAPEVILSWMHYNQTVDIWS 209
Query: 170 VGCIFAEMVSGKPLFPCGKKDHLSLIVR 197
VGCI AEM++GK LF KD+L + +
Sbjct: 210 VGCIMAEMLTGKTLFKG--KDYLDQLTQ 235
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 85/208 (40%), Gaps = 63/208 (30%)
Query: 49 IGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRLLDV 108
+G G +G V ++ +G+KVAIK ++ + E + LLK ++H+N++ LLDV
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 109 LTTG-------------------------------RYVYLVFEYL--------------D 123
T + YLV++ L D
Sbjct: 110 FTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAGVVHRD 169
Query: 124 LDLGSF--------------IRKHTITSIRPHIKEVGSPYKAPESRIRSSVYSTPHDVWA 169
L G+ + +H + ++ V Y+APE + Y+ D+W+
Sbjct: 170 LKPGNLAVNEDCELKILDFGLARHADAEMTGYV--VTRWYRAPEVILSWMHYNQTVDIWS 227
Query: 170 VGCIFAEMVSGKPLFPCGKKDHLSLIVR 197
VGCI AEM++GK LF KD+L + +
Sbjct: 228 VGCIMAEMLTGKTLFKG--KDYLDQLTQ 253
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQ---NEPEGVPSYLIAGVSLLKELEH 99
Y++ E IG+G F V +C+N ETG++ A+K++++ + P L S+ L+H
Sbjct: 26 YELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 100 DNIVRLLDVLTTGRYVYLVFEYLD 123
+IV LL+ ++ +Y+VFE++D
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMD 109
Score = 28.1 bits (61), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Query: 145 VGSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSG 180
VG+P + APE ++ Y P DVW G I ++SG
Sbjct: 194 VGTPHFMAPEV-VKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 86/209 (41%), Gaps = 60/209 (28%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y+ + +G G +G V ++++G K+A+K ++ + + LLK ++H+N+
Sbjct: 53 YQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 112
Query: 103 VRLLDVLTTGRY------VYLVFEYLDLDLGSFIRKHTIT-------------------- 136
+ LLDV T VYLV + DL + ++ +T
Sbjct: 113 IGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 172
Query: 137 ------SIRP--------------------HIKEVGSPY------KAPESRIRSSVYSTP 164
++P H + + Y +APE + Y+
Sbjct: 173 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNMT 232
Query: 165 HDVWAVGCIFAEMVSGKPLFPCGKKDHLS 193
D+W+VGCI AE+++G+ LFP DH++
Sbjct: 233 VDIWSVGCIMAELLTGRTLFP--GTDHIN 259
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 49/80 (61%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
NY++++ IG+G F +V ++ TGK+VA+K+I+ L V ++K L H N
Sbjct: 8 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 67
Query: 102 IVRLLDVLTTGRYVYLVFEY 121
IV+L +V+ T + +YLV EY
Sbjct: 68 IVKLFEVIETEKTLYLVMEY 87
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Query: 148 PYKAPESRIRSSVYSTPH-DVWAVGCIFAEMVSG 180
PY APE + Y P DVW++G I +VSG
Sbjct: 170 PYAAPEL-FQGKKYDGPEVDVWSLGVILYTLVSG 202
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 49/80 (61%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
NY++++ IG+G F +V ++ TGK+VA+K+I+ L V ++K L H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 102 IVRLLDVLTTGRYVYLVFEY 121
IV+L +V+ T + +YLV EY
Sbjct: 75 IVKLFEVIETEKTLYLVMEY 94
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 47/78 (60%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y +V +G+G FGEV KC + T ++ A+K+IN + S ++ V LLK+L+H NI
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNI 83
Query: 103 VRLLDVLTTGRYVYLVFE 120
++L ++L Y+V E
Sbjct: 84 MKLFEILEDSSSFYIVGE 101
Score = 28.1 bits (61), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
Y APE + Y DVW+ G I ++SG P F
Sbjct: 189 YIAPE--VLRGTYDEKCDVWSAGVILYILLSGTPPF 222
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 49/80 (61%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
NY++++ IG+G F +V ++ TGK+VA+K+I+ L V ++K L H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 102 IVRLLDVLTTGRYVYLVFEY 121
IV+L +V+ T + +YLV EY
Sbjct: 75 IVKLFEVIETEKTLYLVMEY 94
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 49/80 (61%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
NY++++ IG+G F +V ++ TGK+VA+K+I+ L V ++K L H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 102 IVRLLDVLTTGRYVYLVFEY 121
IV+L +V+ T + +YLV EY
Sbjct: 75 IVKLFEVIETEKTLYLVMEY 94
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 47/78 (60%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y +V +G+G FGEV KC + T ++ A+K+IN + S ++ V LLK+L+H NI
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNI 83
Query: 103 VRLLDVLTTGRYVYLVFE 120
++L ++L Y+V E
Sbjct: 84 MKLFEILEDSSSFYIVGE 101
Score = 27.7 bits (60), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 8/64 (12%)
Query: 122 LDLDLGSFIRKHTITSIRPHIKEVGSPYK-APESRIRSSVYSTPHDVWAVGCIFAEMVSG 180
+D L + +++T R +G+ Y APE + Y DVW+ G I ++SG
Sbjct: 166 IDFGLSTCFQQNTKMKDR-----IGTAYYIAPE--VLRGTYDEKCDVWSAGVILYILLSG 218
Query: 181 KPLF 184
P F
Sbjct: 219 TPPF 222
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 47/78 (60%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y +V +G+G FGEV KC + T ++ A+K+IN + S ++ V LLK+L+H NI
Sbjct: 24 YNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNI 83
Query: 103 VRLLDVLTTGRYVYLVFE 120
++L ++L Y+V E
Sbjct: 84 MKLFEILEDSSSFYIVGE 101
Score = 27.7 bits (60), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 8/64 (12%)
Query: 122 LDLDLGSFIRKHTITSIRPHIKEVGSPYK-APESRIRSSVYSTPHDVWAVGCIFAEMVSG 180
+D L + +++T R +G+ Y APE + Y DVW+ G I ++SG
Sbjct: 166 IDFGLSTCFQQNTKMKDR-----IGTAYYIAPE--VLRGTYDEKCDVWSAGVILYILLSG 218
Query: 181 KPLF 184
P F
Sbjct: 219 TPPF 222
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQ---NEPEGVPSYLIAGVSLLKELEH 99
Y++ E IG+G F V +C+N ETG++ A+K++++ + P L S+ L+H
Sbjct: 26 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 100 DNIVRLLDVLTTGRYVYLVFEYLD 123
+IV LL+ ++ +Y+VFE++D
Sbjct: 86 PHIVELLETYSSDGMLYMVFEFMD 109
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 54.7 bits (130), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQ---NEPEGVPSYLIAGVSLLKELEH 99
Y++ E IG+G F V +C+N ETG++ A+K++++ + P L S+ L+H
Sbjct: 28 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 87
Query: 100 DNIVRLLDVLTTGRYVYLVFEYLD 123
+IV LL+ ++ +Y+VFE++D
Sbjct: 88 PHIVELLETYSSDGMLYMVFEFMD 111
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 49/80 (61%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
NY++++ IG+G F +V ++ TGK+VA+++I+ L V ++K L H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 102 IVRLLDVLTTGRYVYLVFEY 121
IV+L +V+ T + +YLV EY
Sbjct: 75 IVKLFEVIETEKTLYLVMEY 94
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 49/80 (61%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
NY++++ IG+G F +V ++ TGK+VA+++I+ L V ++K L H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPN 74
Query: 102 IVRLLDVLTTGRYVYLVFEY 121
IV+L +V+ T + +YLV EY
Sbjct: 75 IVKLFEVIETEKTLYLVMEY 94
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 53.5 bits (127), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 62/110 (56%), Gaps = 5/110 (4%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN-IQNEPEGVPSYLIAGVSLLKELEHD 100
NY++++ IG+G F +V ++ TG++VAIK+I+ Q P + L V ++K L H
Sbjct: 13 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQK-LFREVRIMKILNHP 71
Query: 101 NIVRLLDVLTTGRYVYLVFEYLDLDLGSFIRKHTITSIRPHIKEVGSPYK 150
NIV+L +V+ T + +YL+ EY G + + + R KE S ++
Sbjct: 72 NIVKLFEVIETEKTLYLIMEYAS---GGEVFDYLVAHGRMKEKEARSKFR 118
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 53.5 bits (127), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 62/110 (56%), Gaps = 5/110 (4%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN-IQNEPEGVPSYLIAGVSLLKELEHD 100
NY++++ IG+G F +V ++ TG++VAIK+I+ Q P + L V ++K L H
Sbjct: 16 NYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQK-LFREVRIMKILNHP 74
Query: 101 NIVRLLDVLTTGRYVYLVFEYLDLDLGSFIRKHTITSIRPHIKEVGSPYK 150
NIV+L +V+ T + +YL+ EY G + + + R KE S ++
Sbjct: 75 NIVKLFEVIETEKTLYLIMEYAS---GGEVFDYLVAHGRMKEKEARSKFR 121
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 48/80 (60%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
NY++++ IG+G F +V ++ TGK+VA+K+I+ L V + K L H N
Sbjct: 15 NYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPN 74
Query: 102 IVRLLDVLTTGRYVYLVFEY 121
IV+L +V+ T + +YLV EY
Sbjct: 75 IVKLFEVIETEKTLYLVXEY 94
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 87/204 (42%), Gaps = 59/204 (28%)
Query: 41 WNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHD 100
+ Y+V++ IG+G FG+V K + + + VA+KM+ + + I + L++ + D
Sbjct: 97 YRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKD 156
Query: 101 ---NIVRLLDVLTTGRYVYLVFEYLDLDLGSFIRK---------------HTI------- 135
N++ +L+ T ++ + FE L ++L I+K H+I
Sbjct: 157 NTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDAL 216
Query: 136 -------TSIRPH---IKEVGSP-----------------YKAPESR-------IRSSVY 161
++P +K+ G Y +SR I + Y
Sbjct: 217 HKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRFYRAPEVILGARY 276
Query: 162 STPHDVWAVGCIFAEMVSGKPLFP 185
P D+W++GCI AE+++G PL P
Sbjct: 277 GMPIDMWSLGCILAELLTGYPLLP 300
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 87/204 (42%), Gaps = 59/204 (28%)
Query: 41 WNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHD 100
+ Y+V++ IG+G FG+V K + + + VA+KM+ + + I + L++ + D
Sbjct: 97 YRYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKD 156
Query: 101 ---NIVRLLDVLTTGRYVYLVFEYLDLDLGSFIRK---------------HTI------- 135
N++ +L+ T ++ + FE L ++L I+K H+I
Sbjct: 157 NTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDAL 216
Query: 136 -------TSIRPH---IKEVGSP-----------------YKAPESR-------IRSSVY 161
++P +K+ G Y +SR I + Y
Sbjct: 217 HKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYXXIQSRFYRAPEVILGARY 276
Query: 162 STPHDVWAVGCIFAEMVSGKPLFP 185
P D+W++GCI AE+++G PL P
Sbjct: 277 GMPIDMWSLGCILAELLTGYPLLP 300
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 87/204 (42%), Gaps = 59/204 (28%)
Query: 41 WNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHD 100
+ Y+V++ IG+G FG+V K + + + VA+KM+ + + I + L++ + D
Sbjct: 97 YRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKD 156
Query: 101 ---NIVRLLDVLTTGRYVYLVFEYLDLDLGSFIRK---------------HTI------- 135
N++ +L+ T ++ + FE L ++L I+K H+I
Sbjct: 157 NTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDAL 216
Query: 136 -------TSIRPH---IKEVGSP-----------------YKAPESR-------IRSSVY 161
++P +K+ G Y +SR I + Y
Sbjct: 217 HKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRFYRAPEVILGARY 276
Query: 162 STPHDVWAVGCIFAEMVSGKPLFP 185
P D+W++GCI AE+++G PL P
Sbjct: 277 GMPIDMWSLGCILAELLTGYPLLP 300
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
NY V E++G+G F V +C++ TG + A K+IN + L + ++L+H N
Sbjct: 7 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPN 66
Query: 102 IVRLLDVLTTGRYVYLVFE 120
IVRL D + + YLVF+
Sbjct: 67 IVRLHDSIQEESFHYLVFD 85
Score = 29.3 bits (64), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Query: 145 VGSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
G+P Y +PE ++ YS P D+WA G I ++ G P F
Sbjct: 168 AGTPGYLSPEV-LKKDPYSKPVDIWACGVILYILLVGYPPF 207
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
NY V E++G+G F V +C++ TG + A K+IN + L + ++L+H N
Sbjct: 6 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPN 65
Query: 102 IVRLLDVLTTGRYVYLVFE 120
IVRL D + + YLVF+
Sbjct: 66 IVRLHDSIQEESFHYLVFD 84
Score = 29.3 bits (64), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Query: 145 VGSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
G+P Y +PE ++ YS P D+WA G I ++ G P F
Sbjct: 167 AGTPGYLSPEV-LKKDPYSKPVDIWACGVILYILLVGYPPF 206
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
NY V E++G+G F V +C++ TG + A K+IN + L + ++L+H N
Sbjct: 30 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPN 89
Query: 102 IVRLLDVLTTGRYVYLVFE 120
IVRL D + + YLVF+
Sbjct: 90 IVRLHDSIQEESFHYLVFD 108
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Query: 145 VGSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
G+P Y +PE ++ YS P D+WA G I ++ G P F
Sbjct: 191 AGTPGYLSPEV-LKKDPYSKPVDIWACGVILYILLVGYPPF 230
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 51/81 (62%), Gaps = 2/81 (2%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN-IQNEPEGVPSYLIAGVSLLKELEHD 100
NY++ + IG+G F +V ++ TG++VA+K+I+ Q P + L V ++K L H
Sbjct: 16 NYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQK-LFREVRIMKILNHP 74
Query: 101 NIVRLLDVLTTGRYVYLVFEY 121
NIV+L +V+ T + +YLV EY
Sbjct: 75 NIVKLFEVIETEKTLYLVMEY 95
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
NY V E++G+G F V +C++ TG + A K+IN + L + ++L+H N
Sbjct: 7 NYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPN 66
Query: 102 IVRLLDVLTTGRYVYLVFE 120
IVRL D + + YLVF+
Sbjct: 67 IVRLHDSIQEESFHYLVFD 85
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Query: 145 VGSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
G+P Y +PE ++ YS P D+WA G I ++ G P F
Sbjct: 168 AGTPGYLSPEV-LKKDPYSKPVDIWACGVILYILLVGYPPF 207
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 45/78 (57%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y++ E++G+G F V +C+ + TG++ A K+IN + L + + L+H NI
Sbjct: 6 YQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNI 65
Query: 103 VRLLDVLTTGRYVYLVFE 120
VRL D ++ + YLVF+
Sbjct: 66 VRLHDSISEEGFHYLVFD 83
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Query: 145 VGSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
G+P Y +PE +R Y P D+WA G I ++ G P F
Sbjct: 167 AGTPGYLSPEV-LRKDPYGKPVDMWACGVILYILLVGYPPF 206
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
Y++ E++G+G F V +C+ + TG++ A K+IN + L + + L+H N
Sbjct: 5 EYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPN 64
Query: 102 IVRLLDVLTTGRYVYLVFE 120
IVRL D ++ + YLVF+
Sbjct: 65 IVRLHDSISEEGFHYLVFD 83
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Query: 145 VGSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
G+P Y +PE +R Y P D+WA G I ++ G P F
Sbjct: 167 AGTPGYLSPEV-LRKDPYGKPVDMWACGVILYILLVGYPPF 206
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 6/103 (5%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y+ ++ +G G +G V ++ TG KVAIK + + E + LLK + H+N+
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENV 86
Query: 103 VRLLDVLTTGRYV------YLVFEYLDLDLGSFIRKHTITSIR 139
+ LLDV T + YLV ++ DLG ++ + R
Sbjct: 87 IGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDR 129
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLS 193
Y+APE + Y+ D+W+VGCI AEM++GK LF DHL
Sbjct: 191 YRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGS--DHLD 233
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 43/79 (54%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
Y++ E IG+G F V +C+ L TG + A K+IN + L + + L+H N
Sbjct: 5 EYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSN 64
Query: 102 IVRLLDVLTTGRYVYLVFE 120
IVRL D ++ + YLVF+
Sbjct: 65 IVRLHDSISEEGFHYLVFD 83
Score = 30.4 bits (67), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Query: 145 VGSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
G+P Y +PE +R Y P D+WA G I ++ G P F
Sbjct: 167 AGTPGYLSPEV-LRKEAYGKPVDIWACGVILYILLVGYPPF 206
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 50.4 bits (119), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 60/123 (48%), Gaps = 17/123 (13%)
Query: 42 NYKVVEKIGQGVFGEVYKC-----LNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKE 96
N + V IG+G FG V++ L E VA+KM+ + + + + +L+ E
Sbjct: 48 NIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASAD-MQADFQREAALMAE 106
Query: 97 LEHDNIVRLLDVLTTGRYVYLVFEYLDL-DLGSFIRK---HTITSI-------RPHIKEV 145
++ NIV+LL V G+ + L+FEY+ DL F+R HT+ S+ R +
Sbjct: 107 FDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSP 166
Query: 146 GSP 148
G P
Sbjct: 167 GPP 169
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQN-EPEGVPSYLIAGVSLLKELEHD 100
NY++V+ +G+G FG+V + TG+KVA+K+IN + + + +S L+ L H
Sbjct: 14 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 73
Query: 101 NIVRLLDVLTTGRYVYLVFEYLDLDLGSFI 130
+I++L DV+ + + +V EY +L +I
Sbjct: 74 HIIKLYDVIKSKDEIIMVIEYAGNELFDYI 103
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQN-EPEGVPSYLIAGVSLLKELEHD 100
NY++V+ +G+G FG+V + TG+KVA+K+IN + + + +S L+ L H
Sbjct: 15 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 74
Query: 101 NIVRLLDVLTTGRYVYLVFEYLDLDLGSFI 130
+I++L DV+ + + +V EY +L +I
Sbjct: 75 HIIKLYDVIKSKDEIIMVIEYAGNELFDYI 104
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQN-EPEGVPSYLIAGVSLLKELEHD 100
NY++V+ +G+G FG+V + TG+KVA+K+IN + + + +S L+ L H
Sbjct: 5 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 64
Query: 101 NIVRLLDVLTTGRYVYLVFEYLDLDLGSFI 130
+I++L DV+ + + +V EY +L +I
Sbjct: 65 HIIKLYDVIKSKDEIIMVIEYAGNELFDYI 94
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQN-EPEGVPSYLIAGVSLLKELEHD 100
NY++V+ +G+G FG+V + TG+KVA+K+IN + + + +S L+ L H
Sbjct: 9 NYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHP 68
Query: 101 NIVRLLDVLTTGRYVYLVFEYLDLDLGSFI 130
+I++L DV+ + + +V EY +L +I
Sbjct: 69 HIIKLYDVIKSKDEIIMVIEYAGNELFDYI 98
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 44/78 (56%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y+ V+K+G G +GEV C + T + AIK+I + S L+ V++LK L+H NI
Sbjct: 39 YQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNI 98
Query: 103 VRLLDVLTTGRYVYLVFE 120
++L D R YLV E
Sbjct: 99 MKLYDFFEDKRNYYLVME 116
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 50.1 bits (118), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
++++ ++G G FG+VYK N ET A K+I+ ++E E + Y++ + +L +H NI
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEE-LEDYMVE-IDILASCDHPNI 96
Query: 103 VRLLDVLTTGRYVYLVFEY 121
V+LLD ++++ E+
Sbjct: 97 VKLLDAFYYENNLWILIEF 115
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 50.1 bits (118), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
++++ ++G G FG+VYK N ET A K+I+ ++E E + Y++ + +L +H NI
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEE-LEDYMVE-IDILASCDHPNI 96
Query: 103 VRLLDVLTTGRYVYLVFEY 121
V+LLD ++++ E+
Sbjct: 97 VKLLDAFYYENNLWILIEF 115
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 50.1 bits (118), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 27/37 (72%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFP 185
Y+APE + S Y+ D+W+VGCI AEM+S +P+FP
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP 229
Score = 28.1 bits (61), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y + IG+G +G V + +VAIK I+ E + + + +L H+NI
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFRHENI 83
Query: 103 VRLLDVLTTG-----RYVYLVFEYLDLDLGSFIRKHTITS 137
+ + D++ + VY+V + ++ DL ++ +++
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 123
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 50.1 bits (118), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 27/37 (72%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFP 185
Y+APE + S Y+ D+W+VGCI AEM+S +P+FP
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP 233
Score = 28.5 bits (62), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y + IG+G +G V + +VAIK I+ E + + + +L H+NI
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYXQRTLREIKILLRFRHENI 87
Query: 103 VRLLDVLTTG-----RYVYLVFEYLDLDLGSFIRKHTITS 137
+ + D++ + VY+V + ++ DL ++ +++
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 127
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 50.1 bits (118), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 27/37 (72%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFP 185
Y+APE + S Y+ D+W+VGCI AEM+S +P+FP
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP 229
Score = 28.1 bits (61), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y + IG+G +G V + +VAIK I+ E + + + +L H+NI
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFRHENI 83
Query: 103 VRLLDVLTTG-----RYVYLVFEYLDLDLGSFIRKHTITS 137
+ + D++ + VY+V + ++ DL ++ +++
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 123
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 50.1 bits (118), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 27/37 (72%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFP 185
Y+APE + S Y+ D+W+VGCI AEM+S +P+FP
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP 229
Score = 28.5 bits (62), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y + IG+G +G V + +VAIK I+ E + + + +L H+NI
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFRHENI 83
Query: 103 VRLLDVLTTG-----RYVYLVFEYLDLDLGSFIRKHTITS 137
+ + D++ + VY+V + ++ DL ++ +++
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 123
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 50.1 bits (118), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
++++ ++G G FG+VYK N ET A K+I+ ++E E + Y++ + +L +H NI
Sbjct: 39 WEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEE-LEDYMVE-IDILASCDHPNI 96
Query: 103 VRLLDVLTTGRYVYLVFEY 121
V+LLD ++++ E+
Sbjct: 97 VKLLDAFYYENNLWILIEF 115
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 50.1 bits (118), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 27/37 (72%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFP 185
Y+APE + S Y+ D+W+VGCI AEM+S +P+FP
Sbjct: 201 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP 237
Score = 28.5 bits (62), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y + IG+G +G V + +VAIK I+ E + + + +L H+NI
Sbjct: 33 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFRHENI 91
Query: 103 VRLLDVLTTG-----RYVYLVFEYLDLDLGSFIRKHTITS 137
+ + D++ + VY+V + ++ DL ++ +++
Sbjct: 92 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 131
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 50.1 bits (118), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 27/37 (72%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFP 185
Y+APE + S Y+ D+W+VGCI AEM+S +P+FP
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP 229
Score = 28.5 bits (62), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y + IG+G +G V + +VAIK I+ E + + + +L H+NI
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFRHENI 83
Query: 103 VRLLDVLTTG-----RYVYLVFEYLDLDLGSFIRKHTITS 137
+ + D++ + VY+V + ++ DL ++ +++
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 123
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 50.1 bits (118), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 27/37 (72%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFP 185
Y+APE + S Y+ D+W+VGCI AEM+S +P+FP
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP 233
Score = 28.1 bits (61), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y + IG+G +G V + +VAIK I+ E + + + +L H+NI
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFRHENI 87
Query: 103 VRLLDVLTTG-----RYVYLVFEYLDLDLGSFIRKHTITS 137
+ + D++ + VY+V + ++ DL ++ +++
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 127
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 50.1 bits (118), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 27/37 (72%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFP 185
Y+APE + S Y+ D+W+VGCI AEM+S +P+FP
Sbjct: 191 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP 227
Score = 28.1 bits (61), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y + IG+G +G V + +VAIK I+ E + + + +L H+NI
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFRHENI 81
Query: 103 VRLLDVLTTG-----RYVYLVFEYLDLDLGSFIRKHTITS 137
+ + D++ + VY+V + ++ DL ++ +++
Sbjct: 82 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 121
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 50.1 bits (118), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 27/37 (72%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFP 185
Y+APE + S Y+ D+W+VGCI AEM+S +P+FP
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP 229
Score = 28.5 bits (62), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y + IG+G +G V + +VAIK I+ E + + + +L H+NI
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFRHENI 83
Query: 103 VRLLDVLTTG-----RYVYLVFEYLDLDLGSFIRKHTITS 137
+ + D++ + VY+V + ++ DL ++ +++
Sbjct: 84 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 123
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 50.1 bits (118), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 27/37 (72%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFP 185
Y+APE + S Y+ D+W+VGCI AEM+S +P+FP
Sbjct: 191 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP 227
Score = 28.5 bits (62), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y + IG+G +G V + +VAIK I+ E + + + +L H+NI
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFRHENI 81
Query: 103 VRLLDVLTTG-----RYVYLVFEYLDLDLGSFIRKHTITS 137
+ + D++ + VY+V + ++ DL ++ +++
Sbjct: 82 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 121
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.1 bits (118), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 27/37 (72%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFP 185
Y+APE + S Y+ D+W+VGCI AEM+S +P+FP
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP 231
Score = 28.1 bits (61), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y + IG+G +G V + +VAIK I+ E + + + +L H+NI
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILLAFRHENI 85
Query: 103 VRLLDVLTTG-----RYVYLVFEYLDLDLGSFIRKHTITS 137
+ + D++ + VY+V + ++ DL ++ +++
Sbjct: 86 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 125
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 50.1 bits (118), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 27/37 (72%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFP 185
Y+APE + S Y+ D+W+VGCI AEM+S +P+FP
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP 233
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 50.1 bits (118), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 27/37 (72%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFP 185
Y+APE + S Y+ D+W+VGCI AEM+S +P+FP
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP 233
Score = 28.5 bits (62), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y + IG+G +G V + +VAIK I+ E + + + +L H+NI
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFRHENI 87
Query: 103 VRLLDVLTTG-----RYVYLVFEYLDLDLGSFIRKHTITS 137
+ + D++ + VY+V + ++ DL ++ +++
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 127
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 50.1 bits (118), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 27/37 (72%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFP 185
Y+APE + S Y+ D+W+VGCI AEM+S +P+FP
Sbjct: 198 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP 234
Score = 28.1 bits (61), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y + IG+G +G V + +VAIK I+ E + + + +L H+NI
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFRHENI 88
Query: 103 VRLLDVLTTG-----RYVYLVFEYLDLDLGSFIRKHTITS 137
+ + D++ + VY+V + ++ DL ++ +++
Sbjct: 89 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 128
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 50.1 bits (118), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 27/37 (72%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFP 185
Y+APE + S Y+ D+W+VGCI AEM+S +P+FP
Sbjct: 199 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP 235
Score = 28.1 bits (61), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y + IG+G +G V + +VAIK I+ E + + + +L H+NI
Sbjct: 31 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFRHENI 89
Query: 103 VRLLDVLTTG-----RYVYLVFEYLDLDLGSFIRKHTITS 137
+ + D++ + VY+V + ++ DL ++ +++
Sbjct: 90 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 129
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 50.1 bits (118), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 27/37 (72%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFP 185
Y+APE + S Y+ D+W+VGCI AEM+S +P+FP
Sbjct: 190 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP 226
Score = 28.1 bits (61), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y + IG+G +G V + +VAIK I+ E + + + +L H+NI
Sbjct: 22 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFRHENI 80
Query: 103 VRLLDVLTTG-----RYVYLVFEYLDLDLGSFIRKHTITS 137
+ + D++ + VY+V + ++ DL ++ +++
Sbjct: 81 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 120
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 50.1 bits (118), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 27/37 (72%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFP 185
Y+APE + S Y+ D+W+VGCI AEM+S +P+FP
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP 233
Score = 28.1 bits (61), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y + IG+G +G V + +VAIK I+ E + + + +L H+NI
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFRHENI 87
Query: 103 VRLLDVLTTG-----RYVYLVFEYLDLDLGSFIRKHTITS 137
+ + D++ + VY+V + ++ DL ++ +++
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 127
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 50.1 bits (118), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 27/37 (72%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFP 185
Y+APE + S Y+ D+W+VGCI AEM+S +P+FP
Sbjct: 198 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP 234
Score = 28.5 bits (62), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y + IG+G +G V + +VAIK I+ E + + + +L H+NI
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFRHENI 88
Query: 103 VRLLDVLTTG-----RYVYLVFEYLDLDLGSFIRKHTITS 137
+ + D++ + VY+V + ++ DL ++ +++
Sbjct: 89 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 128
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 27/37 (72%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFP 185
Y+APE + S Y+ D+W+VGCI AEM+S +P+FP
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP 231
Score = 28.1 bits (61), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y + IG+G +G V + +VAIK I+ E + + + +L H+NI
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILLAFRHENI 85
Query: 103 VRLLDVLTTG-----RYVYLVFEYLDLDLGSFIRKHTITS 137
+ + D++ + VY+V + ++ DL ++ +++
Sbjct: 86 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 125
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 27/37 (72%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFP 185
Y+APE + S Y+ D+W+VGCI AEM+S +P+FP
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP 231
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y + IG+G +G V + +VAIK I+ E + + + +L H+NI
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFRHENI 85
Query: 103 VRLLDVLTTG-----RYVYLVFEYLDLDLGSFIRKHTITS 137
+ + D++ + VY+V + ++ DL ++ +++
Sbjct: 86 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 125
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 27/37 (72%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFP 185
Y+APE + S Y+ D+W+VGCI AEM+S +P+FP
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP 249
Score = 27.7 bits (60), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 45/100 (45%), Gaps = 6/100 (6%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y + IG+G +G V + +VAIK I+ E + + + +L H+NI
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFRHENI 103
Query: 103 VRLLDVLTTG-----RYVYLVFEYLDLDLGSFIRKHTITS 137
+ + D++ + VYLV + DL ++ +++
Sbjct: 104 IGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSN 143
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 27/37 (72%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFP 185
Y+APE + S Y+ D+W+VGCI AEM+S +P+FP
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP 249
Score = 28.5 bits (62), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y + IG+G +G V + +VAIK I+ E + + + +L H+NI
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFRHENI 103
Query: 103 VRLLDVLTTG-----RYVYLVFEYLDLDLGSFIRKHTITS 137
+ + D++ + VY+V + ++ DL ++ +++
Sbjct: 104 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSN 143
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 27/37 (72%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFP 185
Y+APE + S Y+ D+W+VGCI AEM+S +P+FP
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP 233
Score = 27.7 bits (60), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 44/94 (46%), Gaps = 6/94 (6%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y + IG+G +G V + +VAIK I+ E + + + +L H+NI
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFRHENI 87
Query: 103 VRLLDVLTTG-----RYVYLVFEYLDLDLGSFIR 131
+ + D++ + VY+V + ++ DL ++
Sbjct: 88 IGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLK 121
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 27/37 (72%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFP 185
Y+APE + S Y+ D+W+VGCI AEM+S +P+FP
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFP 249
Score = 34.3 bits (77), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 48/100 (48%), Gaps = 6/100 (6%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y ++ IG+G +G V + +VAIK I+ E + + + +L H+N+
Sbjct: 45 YTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKIS-PFEHQTYCQRTLREIQILLRFRHENV 103
Query: 103 VRLLDVLTTG-----RYVYLVFEYLDLDLGSFIRKHTITS 137
+ + D+L R VY+V + ++ DL ++ +++
Sbjct: 104 IGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSN 143
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPS-YLIAGVSLLKELEHD 100
Y+ V+K+G G +GEV C + TG + AIK+I + S L+ V++LK+L+H
Sbjct: 22 RYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHP 81
Query: 101 NIVRLLDVLTTGRYVYLVFE 120
NI++L + R YLV E
Sbjct: 82 NIMKLYEFFEDKRNYYLVME 101
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPS-YLIAGVSLLKELEHDN 101
Y+ V+K+G G +GEV C + TG + AIK+I + S L+ V++LK+L+H N
Sbjct: 6 YQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPN 65
Query: 102 IVRLLDVLTTGRYVYLVFE 120
I++L + R YLV E
Sbjct: 66 IMKLYEFFEDKRNYYLVME 84
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
+Y+V+ IG G +G K GK + K ++ + E L++ V+LL+EL+H N
Sbjct: 7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPN 66
Query: 102 IVRLLDVL--TTGRYVYLVFEYLD-LDLGSFIRKHT 134
IVR D + T +Y+V EY + DL S I K T
Sbjct: 67 IVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGT 102
Score = 35.4 bits (80), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 27/53 (50%)
Query: 145 VGSPYKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVR 197
VG+PY ++ Y+ D+W++GC+ E+ + P F + L+ +R
Sbjct: 177 VGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIR 229
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 31/42 (73%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPCGKKD 190
Y+APE + + Y+ D+WA+GCIFAE+++ +P+F C ++D
Sbjct: 201 YRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQED 242
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 10/133 (7%)
Query: 32 SEQMEKVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGV 91
S + E+V+D K+G+G +G VYK + + I E G+ +
Sbjct: 12 SSERERVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQI--EGTGISMSACREI 69
Query: 92 SLLKELEHDNIVRLLDVLTT--GRYVYLVFEYLDLDLGSFIRKHTITSIRPHIKEVGSPY 149
+LL+EL+H N++ L V + R V+L+F+Y + DL I+ H + K P
Sbjct: 70 ALLRELKHPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRAS------KANKKPV 123
Query: 150 KAPESRIRSSVYS 162
+ P ++S +Y
Sbjct: 124 QLPRGMVKSLLYQ 136
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 6/80 (7%)
Query: 46 VEKIGQGVFGEVYKCLNLETGKKVAIKMINIQ--NEPEGVPSYLIAGVSLLKELEHDNIV 103
E +G G FG+V+KC TG K+A K+I + + E V + +S++ +L+H N++
Sbjct: 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNE----ISVMNQLDHANLI 149
Query: 104 RLLDVLTTGRYVYLVFEYLD 123
+L D + + LV EY+D
Sbjct: 150 QLYDAFESKNDIVLVMEYVD 169
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
+Y+V+ IG G +G K GK + K ++ + E L++ V+LL+EL+H N
Sbjct: 7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPN 66
Query: 102 IVRLLDVL--TTGRYVYLVFEYLD-LDLGSFIRKHT 134
IVR D + T +Y+V EY + DL S I K T
Sbjct: 67 IVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGT 102
Score = 35.4 bits (80), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 27/53 (50%)
Query: 145 VGSPYKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVR 197
VG+PY ++ Y+ D+W++GC+ E+ + P F + L+ +R
Sbjct: 177 VGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIR 229
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
+Y+V+ IG G +G K GK + K ++ + E L++ V+LL+EL+H N
Sbjct: 7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPN 66
Query: 102 IVRLLD--VLTTGRYVYLVFEYLD-LDLGSFIRKHT 134
IVR D + T +Y+V EY + DL S I K T
Sbjct: 67 IVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGT 102
Score = 35.8 bits (81), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Query: 123 DLDLGSFIRKHTITSIRPHIKE-VGSPYKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGK 181
++ LG F + KE VG+PY ++ Y+ D+W++GC+ E+ +
Sbjct: 154 NVKLGDFGLARILNHDEDFAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALM 213
Query: 182 PLFPCGKKDHLSLIVR 197
P F + L+ +R
Sbjct: 214 PPFTAFSQKELAGKIR 229
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 77/197 (39%), Gaps = 62/197 (31%)
Query: 49 IGQGVFGEVYKCLNLETGKKVAIKMIN--IQNEPEGVPSYLIAGVSLLKELEHDNIVRLL 106
+G G +G V + +KVA+K ++ Q+ +Y + LLK L+H+N++ LL
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTY--RELRLLKHLKHENVIGLL 93
Query: 107 DVLTTG------RYVYLVFEYLDLDLGSFIRKHTIT------------------------ 136
DV T VYLV + DL + ++ ++
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHSAGII 153
Query: 137 --SIRP-----------HIKEVGSPYKAPESR---IRSSVYSTPH------------DVW 168
++P I + G +A E + + Y P D+W
Sbjct: 154 HRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 213
Query: 169 AVGCIFAEMVSGKPLFP 185
+VGCI AE++ GK LFP
Sbjct: 214 SVGCIMAELLQGKALFP 230
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 58/100 (58%), Gaps = 5/100 (5%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQN-EPEGVPSYLIAGVSLLKELEH-D 100
Y ++++IG G +V++ LN E + AIK +N++ + + + SY L K +H D
Sbjct: 58 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 101 NIVRLLDVLTTGRYVYLVFEYLDLDLGSFIRKHTITSIRP 140
I+RL D T +Y+Y+V E ++DL S+++K SI P
Sbjct: 117 KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKK--KSIDP 154
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 61/109 (55%), Gaps = 5/109 (4%)
Query: 34 QMEKVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQN-EPEGVPSYLIAGVS 92
Q VK Y ++++IG G +V++ LN E + AIK +N++ + + + SY
Sbjct: 21 QSMSVKGRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAY 79
Query: 93 LLKELEH-DNIVRLLDVLTTGRYVYLVFEYLDLDLGSFIRKHTITSIRP 140
L K +H D I+RL D T +Y+Y+V E ++DL S+++K SI P
Sbjct: 80 LNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKK--KSIDP 126
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 58/100 (58%), Gaps = 5/100 (5%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQN-EPEGVPSYLIAGVSLLKELEH-D 100
Y ++++IG G +V++ LN E + AIK +N++ + + + SY L K +H D
Sbjct: 11 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 69
Query: 101 NIVRLLDVLTTGRYVYLVFEYLDLDLGSFIRKHTITSIRP 140
I+RL D T +Y+Y+V E ++DL S+++K SI P
Sbjct: 70 KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKK--KSIDP 107
Score = 26.9 bits (58), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 166 DVWAVGCIFAEMVSGKPLF 184
DVW++GCI M GK F
Sbjct: 202 DVWSLGCILYYMTYGKTPF 220
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 58/100 (58%), Gaps = 5/100 (5%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQN-EPEGVPSYLIAGVSLLKELEH-D 100
Y ++++IG G +V++ LN E + AIK +N++ + + + SY L K +H D
Sbjct: 58 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 101 NIVRLLDVLTTGRYVYLVFEYLDLDLGSFIRKHTITSIRP 140
I+RL D T +Y+Y+V E ++DL S+++K SI P
Sbjct: 117 KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKK--KSIDP 154
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINI-QNEPEGVPSYLIAGVSLLKELEHD 100
YK +G+G FGEV C + TG++ A+K+I+ Q + + L+ V LLK+L+H
Sbjct: 33 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHP 92
Query: 101 NIVRLLDVLTTGRYVYLVFE 120
NI++L + Y YLV E
Sbjct: 93 NIMKLYEFFEDKGYFYLVGE 112
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINI-QNEPEGVPSYLIAGVSLLKELEHDN 101
YK +G+G FGEV C + TG++ A+K+I+ Q + + L+ V LLK+L+H N
Sbjct: 28 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 87
Query: 102 IVRLLDVLTTGRYVYLVFE 120
I++L + Y YLV E
Sbjct: 88 IMKLYEFFEDKGYFYLVGE 106
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 58/100 (58%), Gaps = 5/100 (5%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQN-EPEGVPSYLIAGVSLLKELEH-D 100
Y ++++IG G +V++ LN E + AIK +N++ + + + SY L K +H D
Sbjct: 58 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 116
Query: 101 NIVRLLDVLTTGRYVYLVFEYLDLDLGSFIRKHTITSIRP 140
I+RL D T +Y+Y+V E ++DL S+++K SI P
Sbjct: 117 KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKK--KSIDP 154
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINI-QNEPEGVPSYLIAGVSLLKELEHDN 101
YK +G+G FGEV C + TG++ A+K+I+ Q + + L+ V LLK+L+H N
Sbjct: 51 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 110
Query: 102 IVRLLDVLTTGRYVYLVFE 120
I++L + Y YLV E
Sbjct: 111 IMKLYEFFEDKGYFYLVGE 129
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 61/109 (55%), Gaps = 5/109 (4%)
Query: 34 QMEKVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQN-EPEGVPSYLIAGVS 92
Q VK Y ++++IG G +V++ LN E + AIK +N++ + + + SY
Sbjct: 21 QSMSVKGRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAY 79
Query: 93 LLKELEH-DNIVRLLDVLTTGRYVYLVFEYLDLDLGSFIRKHTITSIRP 140
L K +H D I+RL D T +Y+Y+V E ++DL S+++K SI P
Sbjct: 80 LNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKK--KSIDP 126
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINI-QNEPEGVPSYLIAGVSLLKELEHDN 101
YK +G+G FGEV C + TG++ A+K+I+ Q + + L+ V LLK+L+H N
Sbjct: 52 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 111
Query: 102 IVRLLDVLTTGRYVYLVFE 120
I++L + Y YLV E
Sbjct: 112 IMKLYEFFEDKGYFYLVGE 130
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 58/100 (58%), Gaps = 5/100 (5%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQN-EPEGVPSYLIAGVSLLKELEH-D 100
Y ++++IG G +V++ LN E + AIK +N++ + + + SY L K +H D
Sbjct: 14 YSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSD 72
Query: 101 NIVRLLDVLTTGRYVYLVFEYLDLDLGSFIRKHTITSIRP 140
I+RL D T +Y+Y+V E ++DL S+++K SI P
Sbjct: 73 KIIRLYDYEITDQYIYMVMECGNIDLNSWLKKK--KSIDP 110
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 60/105 (57%), Gaps = 5/105 (4%)
Query: 38 VKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQN-EPEGVPSYLIAGVSLLKE 96
VK Y ++++IG G +V++ LN E + AIK +N++ + + + SY L K
Sbjct: 5 VKGRIYSILKQIGSGGSSKVFQVLN-EKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKL 63
Query: 97 LEH-DNIVRLLDVLTTGRYVYLVFEYLDLDLGSFIRKHTITSIRP 140
+H D I+RL D T +Y+Y+V E ++DL S+++K SI P
Sbjct: 64 QQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKK--KSIDP 106
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 48 KIGQGVFGEVY--KCLNL-ETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVR 104
++G+G FG+V+ +C NL K+ + + ++ E LL L+H +IVR
Sbjct: 25 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 84
Query: 105 LLDVLTTGRYVYLVFEYLDL-DLGSFIRKH 133
V T GR + +VFEY+ DL F+R H
Sbjct: 85 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSH 114
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 48 KIGQGVFGEVY--KCLNL-ETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVR 104
++G+G FG+V+ +C NL K+ + + ++ E LL L+H +IVR
Sbjct: 19 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 78
Query: 105 LLDVLTTGRYVYLVFEYLDL-DLGSFIRKH 133
V T GR + +VFEY+ DL F+R H
Sbjct: 79 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSH 108
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 48 KIGQGVFGEVY--KCLNL-ETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVR 104
++G+G FG+V+ +C NL K+ + + ++ E LL L+H +IVR
Sbjct: 48 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 107
Query: 105 LLDVLTTGRYVYLVFEYLDL-DLGSFIRKH 133
V T GR + +VFEY+ DL F+R H
Sbjct: 108 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSH 137
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINI-QNEPEGVPSYLIAGVSLLKELEHDN 101
YK +G+G FGEV C + TG++ A+K+I+ Q + + L+ V LLK+L+H N
Sbjct: 28 YKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPN 87
Query: 102 IVRLLDVLTTGRYVYLVFE 120
I +L + Y YLV E
Sbjct: 88 IXKLYEFFEDKGYFYLVGE 106
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 77/197 (39%), Gaps = 62/197 (31%)
Query: 49 IGQGVFGEVYKCLNLETGKKVAIKMIN--IQNEPEGVPSYLIAGVSLLKELEHDNIVRLL 106
+G G +G V + +KVA+K ++ Q+ +Y + LLK L+H+N++ LL
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTY--RELRLLKHLKHENVIGLL 85
Query: 107 DVLTTG------RYVYLVFEYLDLDLGSFIRKHTIT------------------------ 136
DV T VYLV + DL + ++ ++
Sbjct: 86 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAGII 145
Query: 137 --SIRP-----------HIKEVGSPYKAPESR---IRSSVYSTPH------------DVW 168
++P I + G +A E + + Y P D+W
Sbjct: 146 HRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 205
Query: 169 AVGCIFAEMVSGKPLFP 185
+VGCI AE++ GK LFP
Sbjct: 206 SVGCIMAELLQGKALFP 222
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 124 LDLGSFIRKHTITSIRPHIKEVGSPY-KAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKP 182
L L F ++ P++ + S Y +APE + Y+T D+W+VGCIFAEM+ G+P
Sbjct: 171 LKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEP 230
Query: 183 LF 184
+F
Sbjct: 231 IF 232
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVR 197
Y+APE + Y+ D+W+VGCI AE+++G+ LFP D L LI+R
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 50/101 (49%), Gaps = 6/101 (5%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y+ + +G G +G V + +TG +VA+K ++ + + LLK ++H+N+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 83
Query: 103 VRLLDVLTTGRY------VYLVFEYLDLDLGSFIRKHTITS 137
+ LLDV T R VYLV + DL + ++ +T
Sbjct: 84 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD 124
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVR 197
Y+APE + Y+ D+W+VGCI AE+++G+ LFP D L LI+R
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 53/103 (51%), Gaps = 10/103 (9%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN--IQNEPEGVPSYLIAGVSLLKELEHD 100
Y+ + +G G +G V + +TG +VA+K ++ Q+ +Y + LLK ++H+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHE 81
Query: 101 NIVRLLDVLTTGRY------VYLVFEYLDLDLGSFIRKHTITS 137
N++ LLDV T R VYLV + DL + ++ +T
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD 124
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVR 197
Y+APE + Y+ D+W+VGCI AE+++G+ LFP D L LI+R
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 237
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 53/103 (51%), Gaps = 10/103 (9%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN--IQNEPEGVPSYLIAGVSLLKELEHD 100
Y+ + +G G +G V + +TG +VA+K ++ Q+ +Y + LLK ++H+
Sbjct: 24 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTY--RELRLLKHMKHE 81
Query: 101 NIVRLLDVLTTGRY------VYLVFEYLDLDLGSFIRKHTITS 137
N++ LLDV T R VYLV + DL + ++ +T
Sbjct: 82 NVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD 124
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 50/101 (49%), Gaps = 6/101 (5%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y+ + +G G +G V + +TG +VA+K ++ + + LLK ++H+N+
Sbjct: 20 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 79
Query: 103 VRLLDVLTTGRY------VYLVFEYLDLDLGSFIRKHTITS 137
+ LLDV T R VYLV + DL + ++ +T
Sbjct: 80 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD 120
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVR 197
Y+APE + Y+ D+W+VGCI AE+++G+ LFP D L LI+R
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 233
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 77/197 (39%), Gaps = 62/197 (31%)
Query: 49 IGQGVFGEVYKCLNLETGKKVAIKMIN--IQNEPEGVPSYLIAGVSLLKELEHDNIVRLL 106
+G G +G V + +KVA+K ++ Q+ +Y + LLK L+H+N++ LL
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTY--RELRLLKHLKHENVIGLL 93
Query: 107 DVLTTG------RYVYLVFEYLDLDLGSFIRKHTIT------------------------ 136
DV T VYLV + DL + ++ ++
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAGII 153
Query: 137 --SIRP-----------HIKEVGSPYKAPESR---IRSSVYSTPH------------DVW 168
++P I + G +A E + + Y P D+W
Sbjct: 154 HRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIW 213
Query: 169 AVGCIFAEMVSGKPLFP 185
+VGCI AE++ GK LFP
Sbjct: 214 SVGCIMAELLQGKALFP 230
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 50/101 (49%), Gaps = 6/101 (5%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y+ + +G G +G V + +TG +VA+K ++ + + LLK ++H+N+
Sbjct: 44 YQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 103
Query: 103 VRLLDVLTTGRY------VYLVFEYLDLDLGSFIRKHTITS 137
+ LLDV T R VYLV + DL + ++ +T
Sbjct: 104 IGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTD 144
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIVR 197
Y+APE + Y+ D+W+VGCI AE+++G+ LFP D L LI+R
Sbjct: 208 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILR 257
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 47.4 bits (111), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 76/209 (36%), Gaps = 58/209 (27%)
Query: 34 QMEKVKDW---NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMI-NIQNEPEGVPSYLIA 89
M K + W ++++ +G+G FG VY ++ +A+K++ Q E GV L
Sbjct: 3 HMSKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 62
Query: 90 GVSLLKELEHDNIVRLLDVLTTGRYVYLVFEYLDL--------DLGSFIRKHTIT----- 136
V + L H NI+RL VYL+ EY L L F + T T
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 122
Query: 137 ---------------SIRPH-----------IKEVGSPYKAPESR--------------- 155
I+P I + G AP SR
Sbjct: 123 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEM 182
Query: 156 IRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
I ++ D+W++G + E + GKP F
Sbjct: 183 IEGRMHDEKVDLWSLGVLCYEFLVGKPPF 211
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 44/78 (56%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y++ E++G+G F V +C+ + G++ A K+IN + L + + L+H NI
Sbjct: 24 YQLFEELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNI 83
Query: 103 VRLLDVLTTGRYVYLVFE 120
VRL D ++ + YL+F+
Sbjct: 84 VRLHDSISEEGHHYLIFD 101
Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Query: 145 VGSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
G+P Y +PE +R Y P D+WA G I ++ G P F
Sbjct: 185 AGTPGYLSPEV-LRKDPYGKPVDLWACGVILYILLVGYPPF 224
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 46.6 bits (109), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 27/37 (72%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFP 185
Y+APE ++ Y+T D+W+ GC+ AE++ G+PLFP
Sbjct: 207 YRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFP 243
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIV 196
Y+APE + S+ YS DVW+ GCI AE+ +P+FP H L++
Sbjct: 188 YRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLI 235
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 50/104 (48%), Gaps = 12/104 (11%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAG---VSLLKELE 98
++++ +G+G +G V + TG+ VAIK I EP P + + + +LK +
Sbjct: 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKI----EPFDKPLFALRTLREIKILKHFK 67
Query: 99 HDNIVRLLDVLTTGRY-----VYLVFEYLDLDLGSFIRKHTITS 137
H+NI+ + ++ + VY++ E + DL I ++
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSD 111
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIV 196
Y+APE + S+ YS DVW+ GCI AE+ +P+FP H L++
Sbjct: 188 YRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLI 235
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 50/104 (48%), Gaps = 12/104 (11%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAG---VSLLKELE 98
++++ +G+G +G V + TG+ VAIK I EP P + + + +LK +
Sbjct: 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKI----EPFDKPLFALRTLREIKILKHFK 67
Query: 99 HDNIVRLLDVLTTGRY-----VYLVFEYLDLDLGSFIRKHTITS 137
H+NI+ + ++ + VY++ E + DL I ++
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSD 111
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIV 196
Y+APE + S+ YS DVW+ GCI AE+ +P+FP H L++
Sbjct: 188 YRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLI 235
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/104 (24%), Positives = 50/104 (48%), Gaps = 12/104 (11%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAG---VSLLKELE 98
++++ +G+G +G V + TG+ VAIK I EP P + + + +LK +
Sbjct: 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKI----EPFDKPLFALRTLREIKILKHFK 67
Query: 99 HDNIVRLLDVLTTGRY-----VYLVFEYLDLDLGSFIRKHTITS 137
H+NI+ + ++ + VY++ E + DL I ++
Sbjct: 68 HENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSD 111
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 43/90 (47%), Gaps = 11/90 (12%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPS-----------YLIAGV 91
Y V K+G G +GEV C + AIK+I +G S + +
Sbjct: 38 YFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEI 97
Query: 92 SLLKELEHDNIVRLLDVLTTGRYVYLVFEY 121
SLLK L+H NI++L DV +Y YLV E+
Sbjct: 98 SLLKSLDHPNIIKLFDVFEDKKYFYLVTEF 127
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 3/86 (3%)
Query: 36 EKVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNE-PEGVPSYLIAGVSLL 94
EK++D +KV +G+G F VY+ ++ TG +VAIKMI+ + G+ + V +
Sbjct: 8 EKIED--FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIH 65
Query: 95 KELEHDNIVRLLDVLTTGRYVYLVFE 120
+L+H +I+ L + YVYLV E
Sbjct: 66 CQLKHPSILELYNYFEDSNYVYLVLE 91
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 12/80 (15%)
Query: 140 PHIKE---VGSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPCGK-KDHLSL 194
PH K G+P Y +PE RS+ + DVW++GC+F ++ G+P F K+ L+
Sbjct: 165 PHEKHYTLCGTPNYISPEIATRSA-HGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNK 223
Query: 195 IVRYFTALTNYLVLPCFLSI 214
+V L +Y +P FLSI
Sbjct: 224 VV-----LADY-EMPSFLSI 237
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 31 GSEQMEKVKDWNYKVVEKIGQGVFGEVYKC----LNLETGKKVAIKMINIQNEPEGVPSY 86
GS M + ++ + K ++++G+G FG V C L TG+ VA+K +Q+ E
Sbjct: 18 GSHNMTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK--KLQHSTEEHLRD 75
Query: 87 LIAGVSLLKELEHDNIVRLLDVLTTG--RYVYLVFEYLDL-DLGSFIRKH 133
+ +LK L+HDNIV+ V + R + L+ EYL L +++KH
Sbjct: 76 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH 125
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 58/110 (52%), Gaps = 9/110 (8%)
Query: 31 GSEQMEKVKDWNYKVVEKIGQGVFGEVYKC----LNLETGKKVAIKMINIQNEPEGVPSY 86
GS M + ++ + K ++++G+G FG V C L TG+ VA+K +Q+ E
Sbjct: 18 GSHNMTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK--KLQHSTEEHLRD 75
Query: 87 LIAGVSLLKELEHDNIVRLLDVLTTG--RYVYLVFEYLDL-DLGSFIRKH 133
+ +LK L+HDNIV+ V + R + L+ EYL L +++KH
Sbjct: 76 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH 125
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 61/116 (52%), Gaps = 17/116 (14%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLET-GKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHD 100
Y++V+ +G+G FG+V +C++ + G+ VA+K++ + V Y A S ++ LEH
Sbjct: 15 RYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIV------KNVDRYCEAARSEIQVLEHL 68
Query: 101 NI---------VRLLDVLTTGRYVYLVFEYLDLDLGSFIRKHTITSIR-PHIKEVG 146
N V++L+ ++ +VFE L L FI+++ R HI+++
Sbjct: 69 NTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMA 124
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPC-GKKDHLSLIVRYFTALTNYLV 207
Y+APE I + +S P DVW++GCI E G +FP K+HL+++ R L +++
Sbjct: 200 YRAPEV-ILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMI 258
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 38 VKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKEL 97
V+DW+ +V+ +G+G +GEV +N T + VA+K+++++ + P + + + K L
Sbjct: 6 VEDWD--LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKML 62
Query: 98 EHDNIVRLLDVLTTGRYVYLVFEY 121
H+N+V+ G YL EY
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEY 86
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 61/116 (52%), Gaps = 17/116 (14%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLET-GKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHD 100
Y++V+ +G+G FG+V +C++ + G+ VA+K++ + V Y A S ++ LEH
Sbjct: 15 RYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIV------KNVDRYCEAARSEIQVLEHL 68
Query: 101 NI---------VRLLDVLTTGRYVYLVFEYLDLDLGSFIRKHTITSIR-PHIKEVG 146
N V++L+ ++ +VFE L L FI+++ R HI+++
Sbjct: 69 NTTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMA 124
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPC-GKKDHLSLIVRYFTALTNYLV 207
Y+APE I + +S P DVW++GCI E G +FP K+HL+++ R L +++
Sbjct: 200 YRAPEV-ILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMI 258
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 38 VKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKEL 97
V+DW+ +V+ +G+G +GEV +N T + VA+K+++++ + P + + + K L
Sbjct: 5 VEDWD--LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKML 61
Query: 98 EHDNIVRLLDVLTTGRYVYLVFEY 121
H+N+V+ G YL EY
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEY 85
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 27/36 (75%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
Y+APE + ++ Y+ D+W++GC+F E++ GKPLF
Sbjct: 207 YRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLF 242
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 43/71 (60%), Gaps = 7/71 (9%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y + + +G G FG V + ++E+GK+ A+K + +Q+ P Y + ++K L+H NI
Sbjct: 9 YSLGKTLGTGSFGIVCEVFDIESGKRFALKKV-LQD-----PRYKNRELDIMKVLDHVNI 62
Query: 103 VRLLDVL-TTG 112
++L+D TTG
Sbjct: 63 IKLVDYFYTTG 73
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 82/204 (40%), Gaps = 64/204 (31%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN--IQNEPEGVPSYLIAGVSLLKELEHD 100
Y+ ++ IG G G V + + VAIK ++ QN+ +Y + L+K + H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY--RELVLMKXVNHK 83
Query: 101 NIVRLLDVLTTGRY------VYLVFEYLDLDLGSFIR-------------------KHTI 135
NI+ LL+V T + VYLV E +D +L I+ KH
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 136 TS------IRP-----------HIKEVG-----------SPY------KAPESRIRSSVY 161
++ ++P I + G +PY +APE I Y
Sbjct: 144 SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV-ILGMGY 202
Query: 162 STPHDVWAVGCIFAEMVSGKPLFP 185
D+W+VGCI EMV K LFP
Sbjct: 203 KENVDIWSVGCIMGEMVRHKILFP 226
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 49/79 (62%), Gaps = 4/79 (5%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
+ V+EK+G+G +G VYK ++ ETG+ VAIK + ++++ + + I +S++++ + ++
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEI----IKEISIMQQCDSPHV 86
Query: 103 VRLLDVLTTGRYVYLVFEY 121
V+ +++V EY
Sbjct: 87 VKYYGSYFKNTDLWIVMEY 105
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 38 VKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKEL 97
V+DW+ +V+ +G+G +GEV +N T + VA+K+++++ + P + + + K L
Sbjct: 4 VEDWD--LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKML 60
Query: 98 EHDNIVRLLDVLTTGRYVYLVFEY 121
H+N+V+ G YL EY
Sbjct: 61 NHENVVKFYGHRREGNIQYLFLEY 84
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 38 VKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKEL 97
V+DW+ +V+ +G+G +GEV +N T + VA+K+++++ + P + + + K L
Sbjct: 6 VEDWD--LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKML 62
Query: 98 EHDNIVRLLDVLTTGRYVYLVFEY 121
H+N+V+ G YL EY
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEY 86
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 38 VKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKEL 97
V+DW+ +V+ +G+G +GEV +N T + VA+K+++++ + P + + + K L
Sbjct: 6 VEDWD--LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKML 62
Query: 98 EHDNIVRLLDVLTTGRYVYLVFEY 121
H+N+V+ G YL EY
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEY 86
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 38 VKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKEL 97
V+DW+ +V+ +G+G +GEV +N T + VA+K+++++ + P + + + K L
Sbjct: 6 VEDWD--LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKML 62
Query: 98 EHDNIVRLLDVLTTGRYVYLVFEY 121
H+N+V+ G YL EY
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEY 86
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 38 VKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKEL 97
V+DW+ +V+ +G+G +GEV +N T + VA+K+++++ + P + + + K L
Sbjct: 6 VEDWD--LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKML 62
Query: 98 EHDNIVRLLDVLTTGRYVYLVFEY 121
H+N+V+ G YL EY
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEY 86
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 82/204 (40%), Gaps = 64/204 (31%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN--IQNEPEGVPSYLIAGVSLLKELEHD 100
Y+ ++ IG G G V + + VAIK ++ QN+ +Y + L+K + H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY--RELVLMKXVNHK 83
Query: 101 NIVRLLDVLTTGRY------VYLVFEYLDLDLGSFIR-------------------KHTI 135
NI+ LL+V T + VYLV E +D +L I+ KH
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 136 TS------IRP-----------HIKEVG-----------SPY------KAPESRIRSSVY 161
++ ++P I + G +PY +APE I Y
Sbjct: 144 SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV-ILGMGY 202
Query: 162 STPHDVWAVGCIFAEMVSGKPLFP 185
D+W+VGCI EMV K LFP
Sbjct: 203 KENVDIWSVGCIMGEMVRHKILFP 226
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 38 VKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKEL 97
V+DW+ +V+ +G+G +GEV +N T + VA+K+++++ + P + + + K L
Sbjct: 5 VEDWD--LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKML 61
Query: 98 EHDNIVRLLDVLTTGRYVYLVFEY 121
H+N+V+ G YL EY
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEY 85
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 38 VKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKEL 97
V+DW+ +V+ +G+G +GEV +N T + VA+K+++++ + P + + + K L
Sbjct: 5 VEDWD--LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKML 61
Query: 98 EHDNIVRLLDVLTTGRYVYLVFEY 121
H+N+V+ G YL EY
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEY 85
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 38 VKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKEL 97
V+DW+ +V+ +G+G +GEV +N T + VA+K+++++ + P + + + K L
Sbjct: 5 VEDWD--LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEIXINKML 61
Query: 98 EHDNIVRLLDVLTTGRYVYLVFEY 121
H+N+V+ G YL EY
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEY 85
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 38 VKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKEL 97
V+DW+ +V+ +G+G +GEV +N T + VA+K+++++ + P + + + K L
Sbjct: 5 VEDWD--LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEIXINKML 61
Query: 98 EHDNIVRLLDVLTTGRYVYLVFEY 121
H+N+V+ G YL EY
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEY 85
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 75/206 (36%), Gaps = 58/206 (28%)
Query: 37 KVKDW---NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMI-NIQNEPEGVPSYLIAGVS 92
K + W ++++ +G+G FG VY ++ +A+K++ Q E GV L V
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 93 LLKELEHDNIVRLLDVLTTGRYVYLVFEYLDL--------DLGSFIRKHTIT-------- 136
+ L H NI+RL VYL+ EY L L F + T T
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 123
Query: 137 ------------SIRPH-----------IKEVGSPYKAPESR---------------IRS 158
I+P I + G AP SR I
Sbjct: 124 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEG 183
Query: 159 SVYSTPHDVWAVGCIFAEMVSGKPLF 184
++ D+W++G + E + GKP F
Sbjct: 184 RMHDEKVDLWSLGVLCYEFLVGKPPF 209
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 38 VKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKEL 97
V+DW+ +V+ +G+G +GEV +N T + VA+K+++++ + P + + + K L
Sbjct: 5 VEDWD--LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKML 61
Query: 98 EHDNIVRLLDVLTTGRYVYLVFEY 121
H+N+V+ G YL EY
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEY 85
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 38 VKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKEL 97
V+DW+ +V+ +G+G +GEV +N T + VA+K+++++ + P + + + K L
Sbjct: 5 VEDWD--LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKML 61
Query: 98 EHDNIVRLLDVLTTGRYVYLVFEY 121
H+N+V+ G YL EY
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEY 85
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 75/206 (36%), Gaps = 58/206 (28%)
Query: 37 KVKDW---NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMI-NIQNEPEGVPSYLIAGVS 92
K + W ++++ +G+G FG VY ++ +A+K++ Q E GV L V
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 93 LLKELEHDNIVRLLDVLTTGRYVYLVFEYLDL--------DLGSFIRKHTIT-------- 136
+ L H NI+RL VYL+ EY L L F + T T
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 123
Query: 137 ------------SIRPH-----------IKEVGSPYKAPESR---------------IRS 158
I+P I + G AP SR I
Sbjct: 124 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEG 183
Query: 159 SVYSTPHDVWAVGCIFAEMVSGKPLF 184
++ D+W++G + E + GKP F
Sbjct: 184 RMHDEKVDLWSLGVLCYEFLVGKPPF 209
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 38 VKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKEL 97
V+DW+ +V+ +G+G +GEV +N T + VA+K+++++ + P + + + K L
Sbjct: 6 VEDWD--LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKML 62
Query: 98 EHDNIVRLLDVLTTGRYVYLVFEY 121
H+N+V+ G YL EY
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEY 86
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
Y+++E IG G +G V TG++VAIK I + + + +LK +HDN
Sbjct: 56 EYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDN 115
Query: 102 IVRLLDVLTTG------RYVYLVFEYLDLDLGSFI 130
I+ + D+L + VY+V + ++ DL I
Sbjct: 116 IIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQII 150
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFP 185
Y+APE + Y+ D+W+VGCIF EM++ + LFP
Sbjct: 229 YRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFP 265
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 38 VKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKEL 97
V+DW+ +V+ +G+G +GEV +N T + VA+K+++++ + P + + + K L
Sbjct: 6 VEDWD--LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEIXINKML 62
Query: 98 EHDNIVRLLDVLTTGRYVYLVFEY 121
H+N+V+ G YL EY
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEY 86
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 38 VKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKEL 97
V+DW+ +V+ +G+G +GEV +N T + VA+K+++++ + P + + + K L
Sbjct: 5 VEDWD--LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKML 61
Query: 98 EHDNIVRLLDVLTTGRYVYLVFEY 121
H+N+V+ G YL EY
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEY 85
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 38 VKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKEL 97
V+DW+ +V+ +G+G +GEV +N T + VA+K+++++ + P + + + K L
Sbjct: 5 VEDWD--LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKML 61
Query: 98 EHDNIVRLLDVLTTGRYVYLVFEY 121
H+N+V+ G YL EY
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEY 85
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 75/206 (36%), Gaps = 58/206 (28%)
Query: 37 KVKDW---NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMI-NIQNEPEGVPSYLIAGVS 92
K + W ++++ +G+G FG VY ++ +A+K++ Q E GV L V
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 93 LLKELEHDNIVRLLDVLTTGRYVYLVFEYLDL--------DLGSFIRKHTIT-------- 136
+ L H NI+RL VYL+ EY L L F + T T
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 123
Query: 137 ------------SIRPH-----------IKEVGSPYKAPESR---------------IRS 158
I+P I + G AP SR I
Sbjct: 124 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEG 183
Query: 159 SVYSTPHDVWAVGCIFAEMVSGKPLF 184
++ D+W++G + E + GKP F
Sbjct: 184 RMHDEKVDLWSLGVLCYEFLVGKPPF 209
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 38 VKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKEL 97
V+DW+ +V+ +G+G +GEV +N T + VA+K+++++ + P + + + K L
Sbjct: 5 VEDWD--LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKML 61
Query: 98 EHDNIVRLLDVLTTGRYVYLVFEY 121
H+N+V+ G YL EY
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEY 85
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 38 VKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKEL 97
V+DW+ +V+ +G+G +GEV +N T + VA+K+++++ + P + + + K L
Sbjct: 5 VEDWD--LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKML 61
Query: 98 EHDNIVRLLDVLTTGRYVYLVFEY 121
H+N+V+ G YL EY
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEY 85
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 75/206 (36%), Gaps = 58/206 (28%)
Query: 37 KVKDW---NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMI-NIQNEPEGVPSYLIAGVS 92
K + W ++++ +G+G FG VY ++ +A+K++ Q E GV L V
Sbjct: 1 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 93 LLKELEHDNIVRLLDVLTTGRYVYLVFEYLDL--------DLGSFIRKHTIT-------- 136
+ L H NI+RL VYL+ EY L L F + T T
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 120
Query: 137 ------------SIRPH-----------IKEVGSPYKAPESR---------------IRS 158
I+P I + G AP SR I
Sbjct: 121 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEG 180
Query: 159 SVYSTPHDVWAVGCIFAEMVSGKPLF 184
++ D+W++G + E + GKP F
Sbjct: 181 RMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 75/206 (36%), Gaps = 58/206 (28%)
Query: 37 KVKDW---NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMI-NIQNEPEGVPSYLIAGVS 92
K + W ++++ +G+G FG VY ++ +A+K++ Q E GV L V
Sbjct: 3 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 62
Query: 93 LLKELEHDNIVRLLDVLTTGRYVYLVFEYLDL--------DLGSFIRKHTIT-------- 136
+ L H NI+RL VYL+ EY L L F + T T
Sbjct: 63 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 122
Query: 137 ------------SIRPH-----------IKEVGSPYKAPESR---------------IRS 158
I+P I + G AP SR I
Sbjct: 123 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEG 182
Query: 159 SVYSTPHDVWAVGCIFAEMVSGKPLF 184
++ D+W++G + E + GKP F
Sbjct: 183 RMHDEKVDLWSLGVLCYEFLVGKPPF 208
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
+Y++ E++G+G F V +C+ ++ A K+IN + L + + L+H N
Sbjct: 32 DYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPN 91
Query: 102 IVRLLDVLTTGRYVYLVFE 120
IVRL D ++ + YLVF+
Sbjct: 92 IVRLHDSISEEGFHYLVFD 110
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Query: 145 VGSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
G+P Y +PE +R Y P D+WA G I ++ G P F
Sbjct: 194 AGTPGYLSPEV-LRKDPYGKPVDIWACGVILYILLVGYPPF 233
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
Y+++E IG G +G V TG++VAIK I + + + +LK +HDN
Sbjct: 55 EYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDN 114
Query: 102 IVRLLDVLTTG------RYVYLVFEYLDLDLGSFI 130
I+ + D+L + VY+V + ++ DL I
Sbjct: 115 IIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQII 149
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFP 185
Y+APE + Y+ D+W+VGCIF EM++ + LFP
Sbjct: 228 YRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFP 264
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 75/206 (36%), Gaps = 58/206 (28%)
Query: 37 KVKDW---NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMI-NIQNEPEGVPSYLIAGVS 92
K + W ++++ +G+G FG VY ++ +A+K++ Q E GV L V
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 93 LLKELEHDNIVRLLDVLTTGRYVYLVFEYLDL--------DLGSFIRKHTIT-------- 136
+ L H NI+RL VYL+ EY L L F + T T
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 125
Query: 137 ------------SIRPH-----------IKEVGSPYKAPESR---------------IRS 158
I+P I + G AP SR I
Sbjct: 126 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEG 185
Query: 159 SVYSTPHDVWAVGCIFAEMVSGKPLF 184
++ D+W++G + E + GKP F
Sbjct: 186 RMHDEKVDLWSLGVLCYEFLVGKPPF 211
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 53/103 (51%), Gaps = 4/103 (3%)
Query: 35 MEKVKDWNYKVVEKIGQGVFGEVY--KCLNL-ETGKKVAIKMINIQNEPEGVPSYLIAGV 91
++ +K N + ++G+G FG+V+ +C NL K+ + + +++ +
Sbjct: 7 VQHIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREA 66
Query: 92 SLLKELEHDNIVRLLDVLTTGRYVYLVFEYLDL-DLGSFIRKH 133
LL L+H++IV+ V G + +VFEY+ DL F+R H
Sbjct: 67 ELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAH 109
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 82/204 (40%), Gaps = 64/204 (31%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN--IQNEPEGVPSYLIAGVSLLKELEHD 100
Y+ ++ IG G G V + + VAIK ++ QN+ +Y + L+K + H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY--RELVLMKXVNHK 83
Query: 101 NIVRLLDVLTTGRY------VYLVFEYLDLDLGSFIR-------------------KHTI 135
NI+ LL+V T + VYLV E +D +L I+ KH
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLH 143
Query: 136 TS------IRP-----------HIKEVG-----------SPY------KAPESRIRSSVY 161
++ ++P I + G +PY +APE I Y
Sbjct: 144 SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV-ILGMGY 202
Query: 162 STPHDVWAVGCIFAEMVSGKPLFP 185
D+W+VGCI EMV K LFP
Sbjct: 203 KENVDIWSVGCIMGEMVRHKILFP 226
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 75/206 (36%), Gaps = 58/206 (28%)
Query: 37 KVKDW---NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMI-NIQNEPEGVPSYLIAGVS 92
K + W ++++ +G+G FG VY ++ +A+K++ Q E GV L V
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 93 LLKELEHDNIVRLLDVLTTGRYVYLVFEYLDL--------DLGSFIRKHTIT-------- 136
+ L H NI+RL VYL+ EY L L F + T T
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 121
Query: 137 ------------SIRPH-----------IKEVGSPYKAPESR---------------IRS 158
I+P I + G AP SR I
Sbjct: 122 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEMIEG 181
Query: 159 SVYSTPHDVWAVGCIFAEMVSGKPLF 184
++ D+W++G + E + GKP F
Sbjct: 182 RMHDEKVDLWSLGVLCYEFLVGKPPF 207
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 75/206 (36%), Gaps = 58/206 (28%)
Query: 37 KVKDW---NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMI-NIQNEPEGVPSYLIAGVS 92
K + W ++++ +G+G FG VY ++ +A+K++ Q E GV L V
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 93 LLKELEHDNIVRLLDVLTTGRYVYLVFEYLDL--------DLGSFIRKHTIT-------- 136
+ L H NI+RL VYL+ EY L L F + T T
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 121
Query: 137 ------------SIRPH-----------IKEVGSPYKAPESR---------------IRS 158
I+P I + G AP SR I
Sbjct: 122 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEG 181
Query: 159 SVYSTPHDVWAVGCIFAEMVSGKPLF 184
++ D+W++G + E + GKP F
Sbjct: 182 RMHDEKVDLWSLGVLCYEFLVGKPPF 207
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQN-EPEGVPSYLIAGVSLLKELEHDN 101
Y + E +G+G FG+V + +T +KVA+K I+ Q + + + +S LK L H +
Sbjct: 11 YIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPH 70
Query: 102 IVRLLDVLTTGRYVYLVFEYLDLDLGSFI 130
I++L DV+TT + +V EY +L +I
Sbjct: 71 IIKLYDVITTPTDIVMVIEYAGGELFDYI 99
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 1/81 (1%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMI-NIQNEPEGVPSYLIAGVSLLKELEHD 100
++++ +G+G FG VY ++ VA+K++ Q E EGV L + + L H
Sbjct: 24 DFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHP 83
Query: 101 NIVRLLDVLTTGRYVYLVFEY 121
NI+RL + R +YL+ EY
Sbjct: 84 NILRLYNYFYDRRRIYLILEY 104
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
Y++ E++G+G F V +C+ + G++ A +IN + L + + L+H N
Sbjct: 12 EYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPN 71
Query: 102 IVRLLDVLTTGRYVYLVFE 120
IVRL D ++ + YL+F+
Sbjct: 72 IVRLHDSISEEGHHYLIFD 90
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Query: 145 VGSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
G+P Y +PE +R Y P D+WA G I ++ G P F
Sbjct: 174 AGTPGYLSPEV-LRKDPYGKPVDLWACGVILYILLVGYPPF 213
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
+++V ++G G FG+VYK N ETG A K+I ++E E + Y++ + +L +H I
Sbjct: 13 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEE-LEDYIVE-IEILATCDHPYI 70
Query: 103 VRLLDVLTTGRYVYLVFEY 121
V+LL ++++ E+
Sbjct: 71 VKLLGAYYHDGKLWIMIEF 89
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 75/206 (36%), Gaps = 58/206 (28%)
Query: 37 KVKDW---NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMI-NIQNEPEGVPSYLIAGVS 92
K + W ++++ +G+G FG VY ++ +A+K++ Q E GV L V
Sbjct: 18 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 77
Query: 93 LLKELEHDNIVRLLDVLTTGRYVYLVFEYLDL--------DLGSFIRKHTIT-------- 136
+ L H NI+RL VYL+ EY L L F + T T
Sbjct: 78 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 137
Query: 137 ------------SIRPH-----------IKEVGSPYKAPESR---------------IRS 158
I+P I + G AP SR I
Sbjct: 138 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEG 197
Query: 159 SVYSTPHDVWAVGCIFAEMVSGKPLF 184
++ D+W++G + E + GKP F
Sbjct: 198 RMHDEKVDLWSLGVLCYEFLVGKPPF 223
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 75/206 (36%), Gaps = 58/206 (28%)
Query: 37 KVKDW---NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMI-NIQNEPEGVPSYLIAGVS 92
K + W ++++ +G+G FG VY ++ +A+K++ Q E GV L V
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 93 LLKELEHDNIVRLLDVLTTGRYVYLVFEYLDL--------DLGSFIRKHTIT-------- 136
+ L H NI+RL VYL+ EY L L F + T T
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 121
Query: 137 ------------SIRPH-----------IKEVGSPYKAPESR---------------IRS 158
I+P I + G AP SR I
Sbjct: 122 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLSGTLDYLPPEMIEG 181
Query: 159 SVYSTPHDVWAVGCIFAEMVSGKPLF 184
++ D+W++G + E + GKP F
Sbjct: 182 RMHDEKVDLWSLGVLCYEFLVGKPPF 207
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 117 LVFEYLDLDLGSFIRKHTITSIRPHIKE--VGSPYKAPESRIRSSVYSTPHDVWAVGCIF 174
LV + D L + H S + H+ E V Y++P + + Y+ D+WA GCIF
Sbjct: 158 LVLKIGDFGLARIMDPHY--SHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIF 215
Query: 175 AEMVSGKPLF 184
AEM++GK LF
Sbjct: 216 AEMLTGKTLF 225
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 56/104 (53%), Gaps = 16/104 (15%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y ++ +G G G V+ ++ + K+VAIK I + +P+ V + + + +++ L+HDNI
Sbjct: 13 YMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKI-VLTDPQSV-KHALREIKIIRRLDHDNI 70
Query: 103 VRLLDV--------------LTTGRYVYLVFEYLDLDLGSFIRK 132
V++ ++ LT VY+V EY++ DL + + +
Sbjct: 71 VKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQ 114
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 4/81 (4%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAG-VSLLKELEHDN 101
Y ++E++G G FG V++C+ TG+ K IN P + Y + +S++ +L H
Sbjct: 53 YDILEELGSGAFGVVHRCVEKATGRVFVAKFINT---PYPLDKYTVKNEISIMNQLHHPK 109
Query: 102 IVRLLDVLTTGRYVYLVFEYL 122
++ L D + L+ E+L
Sbjct: 110 LINLHDAFEDKYEMVLILEFL 130
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 46/79 (58%), Gaps = 2/79 (2%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
+++V ++G G FG+VYK N ETG A K+I ++E E + Y++ + +L +H I
Sbjct: 21 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEE-LEDYIVE-IEILATCDHPYI 78
Query: 103 VRLLDVLTTGRYVYLVFEY 121
V+LL ++++ E+
Sbjct: 79 VKLLGAYYHDGKLWIMIEF 97
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 75/206 (36%), Gaps = 58/206 (28%)
Query: 37 KVKDW---NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMI-NIQNEPEGVPSYLIAGVS 92
K + W ++++ +G+G FG VY ++ +A+K++ Q E GV L V
Sbjct: 27 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 86
Query: 93 LLKELEHDNIVRLLDVLTTGRYVYLVFEYLDL--------DLGSFIRKHTIT-------- 136
+ L H NI+RL VYL+ EY L L F + T T
Sbjct: 87 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 146
Query: 137 ------------SIRPH-----------IKEVGSPYKAPESR---------------IRS 158
I+P I + G AP SR I
Sbjct: 147 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEG 206
Query: 159 SVYSTPHDVWAVGCIFAEMVSGKPLF 184
++ D+W++G + E + GKP F
Sbjct: 207 RMHDEKVDLWSLGVLCYEFLVGKPPF 232
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 75/206 (36%), Gaps = 58/206 (28%)
Query: 37 KVKDW---NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMI-NIQNEPEGVPSYLIAGVS 92
K + W ++++ +G+G FG VY ++ +A+K++ Q E GV L V
Sbjct: 27 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 86
Query: 93 LLKELEHDNIVRLLDVLTTGRYVYLVFEYLDL--------DLGSFIRKHTIT-------- 136
+ L H NI+RL VYL+ EY L L F + T T
Sbjct: 87 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 146
Query: 137 ------------SIRPH-----------IKEVGSPYKAPESR---------------IRS 158
I+P I + G AP SR I
Sbjct: 147 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEG 206
Query: 159 SVYSTPHDVWAVGCIFAEMVSGKPLF 184
++ D+W++G + E + GKP F
Sbjct: 207 RMHDEKVDLWSLGVLCYEFLVGKPPF 232
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 78/209 (37%), Gaps = 57/209 (27%)
Query: 31 GSEQMEKVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMI-NIQNEPEGVPSYLIA 89
GS++ ++D +++ +G+G FG VY ++ +A+K++ Q E GV L
Sbjct: 4 GSKRQWALED--FEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRR 61
Query: 90 GVSLLKELEHDNIVRLLDVLTTGRYVYLVFEYLDL--------DLGSFIRKHTIT----- 136
V + L H NI+RL VYL+ EY L L F + T T
Sbjct: 62 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 121
Query: 137 ---------------SIRPH-----------IKEVGSPYKAPESR--------------- 155
I+P I + G AP SR
Sbjct: 122 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM 181
Query: 156 IRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
I ++ D+W++G + E + GKP F
Sbjct: 182 IEGRMHDEKVDLWSLGVLCYEFLVGKPPF 210
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 42 NYKVVEKIGQGVFGEVYKC-LNLETGKK--VAIKMINIQNEPEGVPSYLIAGVSLLKELE 98
N + + +G G FGEV L L + K+ VAIK + + + +L S++ + +
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFL-GEASIMGQFD 104
Query: 99 HDNIVRLLDVLTTGRYVYLVFEYLD-LDLGSFIRKH 133
H NI+RL V+T + V +V EY++ L SF+RKH
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH 140
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 42 NYKVVEKIGQGVFGEVYKC-LNLETGKK--VAIKMINIQNEPEGVPSYLIAGVSLLKELE 98
N + + +G G FGEV L L + K+ VAIK + + + +L S++ + +
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFL-GEASIMGQFD 104
Query: 99 HDNIVRLLDVLTTGRYVYLVFEYLD-LDLGSFIRKH 133
H NI+RL V+T + V +V EY++ L SF+RKH
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH 140
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 42 NYKVVEKIGQGVFGEVYKC-LNLETGKK--VAIKMINIQNEPEGVPSYLIAGVSLLKELE 98
N + + +G G FGEV L L + K+ VAIK + + + +L S++ + +
Sbjct: 34 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFL-GEASIMGQFD 92
Query: 99 HDNIVRLLDVLTTGRYVYLVFEYLD-LDLGSFIRKH 133
H NI+RL V+T + V +V EY++ L SF+RKH
Sbjct: 93 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH 128
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 42 NYKVVEKIGQGVFGEVYKC-LNLETGKK--VAIKMINIQNEPEGVPSYLIAGVSLLKELE 98
N + + +G G FGEV L L + K+ VAIK + + + +L S++ + +
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFL-GEASIMGQFD 104
Query: 99 HDNIVRLLDVLTTGRYVYLVFEYLD-LDLGSFIRKH 133
H NI+RL V+T + V +V EY++ L SF+RKH
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH 140
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 42 NYKVVEKIGQGVFGEVYKC-LNLETGKK--VAIKMINIQNEPEGVPSYLIAGVSLLKELE 98
N + + +G G FGEV L L + K+ VAIK + + + +L S++ + +
Sbjct: 17 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFL-GEASIMGQFD 75
Query: 99 HDNIVRLLDVLTTGRYVYLVFEYLD-LDLGSFIRKH 133
H NI+RL V+T + V +V EY++ L SF+RKH
Sbjct: 76 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH 111
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 42 NYKVVEKIGQGVFGEVYKC-LNLETGKK--VAIKMINIQNEPEGVPSYLIAGVSLLKELE 98
N + + +G G FGEV L L + K+ VAIK + + + +L S++ + +
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFL-GEASIMGQFD 104
Query: 99 HDNIVRLLDVLTTGRYVYLVFEYLD-LDLGSFIRKH 133
H NI+RL V+T + V +V EY++ L SF+RKH
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH 140
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 42 NYKVVEKIGQGVFGEVYKC-LNLETGKK--VAIKMINIQNEPEGVPSYLIAGVSLLKELE 98
N + + +G G FGEV L L + K+ VAIK + + + +L S++ + +
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFL-GEASIMGQFD 104
Query: 99 HDNIVRLLDVLTTGRYVYLVFEYLD-LDLGSFIRKH 133
H NI+RL V+T + V +V EY++ L SF+RKH
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH 140
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 42 NYKVVEKIGQGVFGEVYKC-LNLETGKK--VAIKMINIQNEPEGVPSYLIAGVSLLKELE 98
N + + +G G FGEV L L + K+ VAIK + + + +L S++ + +
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFL-GEASIMGQFD 104
Query: 99 HDNIVRLLDVLTTGRYVYLVFEYLD-LDLGSFIRKH 133
H NI+RL V+T + V +V EY++ L SF+RKH
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH 140
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 42 NYKVVEKIGQGVFGEVYKC-LNLETGKK--VAIKMINIQNEPEGVPSYLIAGVSLLKELE 98
N + + +G G FGEV L L + K+ VAIK + + + +L S++ + +
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFL-GEASIMGQFD 104
Query: 99 HDNIVRLLDVLTTGRYVYLVFEYLD-LDLGSFIRKH 133
H NI+RL V+T + V +V EY++ L SF+RKH
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH 140
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 74/206 (35%), Gaps = 58/206 (28%)
Query: 37 KVKDW---NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMI-NIQNEPEGVPSYLIAGVS 92
K + W ++++ +G+G FG VY ++ +A+K++ Q E GV L V
Sbjct: 3 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 62
Query: 93 LLKELEHDNIVRLLDVLTTGRYVYLVFEYLDL--------DLGSFIRKHTIT-------- 136
+ L H NI+RL VYL+ EY L L F + T T
Sbjct: 63 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 122
Query: 137 ------------SIRPH-----------IKEVGSPYKAPESR---------------IRS 158
I+P I G AP SR I
Sbjct: 123 LSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIEG 182
Query: 159 SVYSTPHDVWAVGCIFAEMVSGKPLF 184
++ D+W++G + E + GKP F
Sbjct: 183 RMHDEKVDLWSLGVLCYEFLVGKPPF 208
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 42 NYKVVEKIGQGVFGEVYKC-LNLETGKK--VAIKMINIQNEPEGVPSYLIAGVSLLKELE 98
N + + +G G FGEV L L + K+ VAIK + + + +L S++ + +
Sbjct: 44 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFL-GEASIMGQFD 102
Query: 99 HDNIVRLLDVLTTGRYVYLVFEYLDL-DLGSFIRKH 133
H NI+RL V+T + V +V EY++ L SF+RKH
Sbjct: 103 HPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH 138
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 48/81 (59%), Gaps = 7/81 (8%)
Query: 44 KVVEKIGQGVFGEVYKCLNLETG-KKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
K+VE++G G FGEV+ + G KVA+K + + P +A +L+K+L+H +
Sbjct: 24 KLVERLGAGQFGEVW--MGYYNGHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRL 78
Query: 103 VRLLDVLTTGRYVYLVFEYLD 123
VRL V+T +Y++ EY++
Sbjct: 79 VRLYAVVTQ-EPIYIITEYME 98
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 74/206 (35%), Gaps = 58/206 (28%)
Query: 37 KVKDW---NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMI-NIQNEPEGVPSYLIAGVS 92
K + W ++++ +G+G FG VY ++ +A+K++ Q E GV L V
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 93 LLKELEHDNIVRLLDVLTTGRYVYLVFEYLDL--------DLGSFIRKHTIT-------- 136
+ L H NI+RL VYL+ EY L L F + T T
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 123
Query: 137 ------------SIRPH-----------IKEVGSPYKAPESR---------------IRS 158
I+P I G AP SR I
Sbjct: 124 LSYCHSKRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPEMIEG 183
Query: 159 SVYSTPHDVWAVGCIFAEMVSGKPLF 184
++ D+W++G + E + GKP F
Sbjct: 184 RMHDEKVDLWSLGVLCYEFLVGKPPF 209
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 48/81 (59%), Gaps = 7/81 (8%)
Query: 44 KVVEKIGQGVFGEVYKCLNLETG-KKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
K+VE++G G FGEV+ + G KVA+K + + P +A +L+K+L+H +
Sbjct: 26 KLVERLGAGQFGEVW--MGYYNGHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRL 80
Query: 103 VRLLDVLTTGRYVYLVFEYLD 123
VRL V+T +Y++ EY++
Sbjct: 81 VRLYAVVTQ-EPIYIITEYME 100
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 74/206 (35%), Gaps = 58/206 (28%)
Query: 37 KVKDW---NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMI-NIQNEPEGVPSYLIAGVS 92
K + W ++++ +G+G FG VY ++ +A+K++ Q E GV L V
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 93 LLKELEHDNIVRLLDVLTTGRYVYLVFEYLDL--------DLGSFIRKHTIT-------- 136
+ L H NI+RL VYL+ EY L L F + T T
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANA 125
Query: 137 ------------SIRPH-----------IKEVGSPYKAPESR---------------IRS 158
I+P I + G AP SR I
Sbjct: 126 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEXIEG 185
Query: 159 SVYSTPHDVWAVGCIFAEMVSGKPLF 184
+ D+W++G + E + GKP F
Sbjct: 186 RXHDEKVDLWSLGVLCYEFLVGKPPF 211
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y++ E IG G F +V ++ TG+ VAIK+++ +P + + LK L H +I
Sbjct: 12 YELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPR-IKTEIEALKNLRHQHI 70
Query: 103 VRLLDVLTTGRYVYLVFEY 121
+L VL T +++V EY
Sbjct: 71 CQLYHVLETANKIFMVLEY 89
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 48/81 (59%), Gaps = 7/81 (8%)
Query: 44 KVVEKIGQGVFGEVYKCLNLETG-KKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
K+VE++G G FGEV+ + G KVA+K + + P +A +L+K+L+H +
Sbjct: 22 KLVERLGAGQFGEVW--MGYYNGHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRL 76
Query: 103 VRLLDVLTTGRYVYLVFEYLD 123
VRL V+T +Y++ EY++
Sbjct: 77 VRLYAVVTQ-EPIYIITEYME 96
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 48/81 (59%), Gaps = 7/81 (8%)
Query: 44 KVVEKIGQGVFGEVYKCLNLETG-KKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
K+VE++G G FGEV+ + G KVA+K + + P +A +L+K+L+H +
Sbjct: 22 KLVERLGAGQFGEVW--MGYYNGHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRL 76
Query: 103 VRLLDVLTTGRYVYLVFEYLD 123
VRL V+T +Y++ EY++
Sbjct: 77 VRLYAVVTQ-EPIYIITEYME 96
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 48/81 (59%), Gaps = 7/81 (8%)
Query: 44 KVVEKIGQGVFGEVYKCLNLETG-KKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
K+VE++G G FGEV+ + G KVA+K + + P +A +L+K+L+H +
Sbjct: 25 KLVERLGAGQFGEVW--MGYYNGHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRL 79
Query: 103 VRLLDVLTTGRYVYLVFEYLD 123
VRL V+T +Y++ EY++
Sbjct: 80 VRLYAVVTQ-EPIYIITEYME 99
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEG-VPSYLIAGVSLLKELEHD 100
N+++ +KIG+G F EVY+ L G VA+K + I + + + I + LLK+L H
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 101 NIVRLLDVLTTGRYVYLVFEYLDL-DLGSFIR 131
N+++ + +V E D DL I+
Sbjct: 93 NVIKYYASFIEDNELNIVLELADAGDLSRMIK 124
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 42/93 (45%), Gaps = 8/93 (8%)
Query: 91 VSLLKELEHDNIVRLLDVLTTGRYVYL----VFEYLDLDLGSFIRKHTITSIRPHIKEVG 146
V L LEH + R++ V++ V + DL LG F T + VG
Sbjct: 143 VQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAH----SLVG 198
Query: 147 SPYKAPESRIRSSVYSTPHDVWAVGCIFAEMVS 179
+PY RI + Y+ D+W++GC+ EM +
Sbjct: 199 TPYYMSPERIHENGYNFKSDIWSLGCLLYEMAA 231
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 72/198 (36%), Gaps = 55/198 (27%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMI-NIQNEPEGVPSYLIAGVSLLKELEHD 100
++++ +G+G FG VY ++ +A+K++ Q E GV L V + L H
Sbjct: 9 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 68
Query: 101 NIVRLLDVLTTGRYVYLVFEYLDL--------DLGSFIRKHTIT---------------- 136
NI+RL VYL+ EY L L F + T T
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 128
Query: 137 ----SIRPH-----------IKEVGSPYKAPESR---------------IRSSVYSTPHD 166
I+P I + G AP SR I ++ D
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLCGTLDYLPPEMIEGRMHDEKVD 188
Query: 167 VWAVGCIFAEMVSGKPLF 184
+W++G + E + GKP F
Sbjct: 189 LWSLGVLCYEFLVGKPPF 206
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 72/198 (36%), Gaps = 55/198 (27%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMI-NIQNEPEGVPSYLIAGVSLLKELEHD 100
++++ +G+G FG VY ++ +A+K++ Q E GV L V + L H
Sbjct: 8 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 67
Query: 101 NIVRLLDVLTTGRYVYLVFEYLDL--------DLGSFIRKHTIT---------------- 136
NI+RL VYL+ EY L L F + T T
Sbjct: 68 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 127
Query: 137 ----SIRPH-----------IKEVGSPYKAPESR---------------IRSSVYSTPHD 166
I+P I + G AP SR I ++ D
Sbjct: 128 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVD 187
Query: 167 VWAVGCIFAEMVSGKPLF 184
+W++G + E + GKP F
Sbjct: 188 LWSLGVLCYEFLVGKPPF 205
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 72/198 (36%), Gaps = 55/198 (27%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMI-NIQNEPEGVPSYLIAGVSLLKELEHD 100
++++ +G+G FG VY ++ +A+K++ Q E GV L V + L H
Sbjct: 9 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 68
Query: 101 NIVRLLDVLTTGRYVYLVFEYLDL--------DLGSFIRKHTIT---------------- 136
NI+RL VYL+ EY L L F + T T
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 128
Query: 137 ----SIRPH-----------IKEVGSPYKAPESR---------------IRSSVYSTPHD 166
I+P I + G AP SR I ++ D
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVD 188
Query: 167 VWAVGCIFAEMVSGKPLF 184
+W++G + E + GKP F
Sbjct: 189 LWSLGVLCYEFLVGKPPF 206
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 72/198 (36%), Gaps = 55/198 (27%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMI-NIQNEPEGVPSYLIAGVSLLKELEHD 100
++++ +G+G FG VY ++ +A+K++ Q E GV L V + L H
Sbjct: 9 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 68
Query: 101 NIVRLLDVLTTGRYVYLVFEYLDL--------DLGSFIRKHTIT---------------- 136
NI+RL VYL+ EY L L F + T T
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 128
Query: 137 ----SIRPH-----------IKEVGSPYKAPESR---------------IRSSVYSTPHD 166
I+P I + G AP SR I ++ D
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVD 188
Query: 167 VWAVGCIFAEMVSGKPLF 184
+W++G + E + GKP F
Sbjct: 189 LWSLGVLCYEFLVGKPPF 206
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 48/81 (59%), Gaps = 7/81 (8%)
Query: 44 KVVEKIGQGVFGEVYKCLNLETG-KKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
K+VE++G G FGEV+ + G KVA+K + + P +A +L+K+L+H +
Sbjct: 21 KLVERLGAGQFGEVW--MGYYNGHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRL 75
Query: 103 VRLLDVLTTGRYVYLVFEYLD 123
VRL V+T +Y++ EY++
Sbjct: 76 VRLYAVVTQ-EPIYIITEYME 95
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 72/198 (36%), Gaps = 55/198 (27%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMI-NIQNEPEGVPSYLIAGVSLLKELEHD 100
++++ +G+G FG VY ++ +A+K++ Q E GV L V + L H
Sbjct: 9 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 68
Query: 101 NIVRLLDVLTTGRYVYLVFEYLDL--------DLGSFIRKHTIT---------------- 136
NI+RL VYL+ EY L L F + T T
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 128
Query: 137 ----SIRPH-----------IKEVGSPYKAPESR---------------IRSSVYSTPHD 166
I+P I + G AP SR I ++ D
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVD 188
Query: 167 VWAVGCIFAEMVSGKPLF 184
+W++G + E + GKP F
Sbjct: 189 LWSLGVLCYEFLVGKPPF 206
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 72/198 (36%), Gaps = 55/198 (27%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMI-NIQNEPEGVPSYLIAGVSLLKELEHD 100
++++ +G+G FG VY ++ +A+K++ Q E GV L V + L H
Sbjct: 9 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 68
Query: 101 NIVRLLDVLTTGRYVYLVFEYLDL--------DLGSFIRKHTIT---------------- 136
NI+RL VYL+ EY L L F + T T
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 128
Query: 137 ----SIRPH-----------IKEVGSPYKAPESR---------------IRSSVYSTPHD 166
I+P I + G AP SR I ++ D
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVD 188
Query: 167 VWAVGCIFAEMVSGKPLF 184
+W++G + E + GKP F
Sbjct: 189 LWSLGVLCYEFLVGKPPF 206
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 49/105 (46%), Gaps = 2/105 (1%)
Query: 31 GSEQMEKVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINI-QNEPEGVPSYLIA 89
GS + K+ + YK+V+K+G G VY + KVAIK I I E E
Sbjct: 1 GSHMIGKIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFER 60
Query: 90 GVSLLKELEHDNIVRLLDVLTTGRYVYLVFEYLD-LDLGSFIRKH 133
V +L H NIV ++DV YLV EY++ L +I H
Sbjct: 61 EVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESH 105
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 48/81 (59%), Gaps = 7/81 (8%)
Query: 44 KVVEKIGQGVFGEVYKCLNLETG-KKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
K+VE++G G FGEV+ + G KVA+K + + P +A +L+K+L+H +
Sbjct: 16 KLVERLGAGQFGEVW--MGYYNGHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRL 70
Query: 103 VRLLDVLTTGRYVYLVFEYLD 123
VRL V+T +Y++ EY++
Sbjct: 71 VRLYAVVTQ-EPIYIITEYME 90
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 72/198 (36%), Gaps = 55/198 (27%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMI-NIQNEPEGVPSYLIAGVSLLKELEHD 100
++++ +G+G FG VY ++ +A+K++ Q E GV L V + L H
Sbjct: 9 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 68
Query: 101 NIVRLLDVLTTGRYVYLVFEYLDL--------DLGSFIRKHTIT---------------- 136
NI+RL VYL+ EY L L F + T T
Sbjct: 69 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 128
Query: 137 ----SIRPH-----------IKEVGSPYKAPESR---------------IRSSVYSTPHD 166
I+P I + G AP SR I ++ D
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTELCGTLDYLPPEMIEGRMHDEKVD 188
Query: 167 VWAVGCIFAEMVSGKPLF 184
+W++G + E + GKP F
Sbjct: 189 LWSLGVLCYEFLVGKPPF 206
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 48/81 (59%), Gaps = 7/81 (8%)
Query: 44 KVVEKIGQGVFGEVYKCLNLETG-KKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
K+VE++G G FGEV+ + G KVA+K + + P +A +L+K+L+H +
Sbjct: 18 KLVERLGAGQFGEVW--MGYYNGHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRL 72
Query: 103 VRLLDVLTTGRYVYLVFEYLD 123
VRL V+T +Y++ EY++
Sbjct: 73 VRLYAVVTQ-EPIYIITEYME 92
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 48/81 (59%), Gaps = 7/81 (8%)
Query: 44 KVVEKIGQGVFGEVYKCLNLETG-KKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
K+VE++G G FGEV+ + G KVA+K + + P +A +L+K+L+H +
Sbjct: 17 KLVERLGAGQFGEVW--MGYYNGHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRL 71
Query: 103 VRLLDVLTTGRYVYLVFEYLD 123
VRL V+T +Y++ EY++
Sbjct: 72 VRLYAVVTQ-EPIYIITEYME 91
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 48/81 (59%), Gaps = 7/81 (8%)
Query: 44 KVVEKIGQGVFGEVYKCLNLETG-KKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
K+VE++G G FGEV+ + G KVA+K + + P +A +L+K+L+H +
Sbjct: 16 KLVERLGAGQFGEVW--MGYYNGHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRL 70
Query: 103 VRLLDVLTTGRYVYLVFEYLD 123
VRL V+T +Y++ EY++
Sbjct: 71 VRLYAVVTQ-EPIYIITEYME 90
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 72/198 (36%), Gaps = 55/198 (27%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMI-NIQNEPEGVPSYLIAGVSLLKELEHD 100
++++ +G+G FG VY ++ +A+K++ Q E GV L V + L H
Sbjct: 12 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 71
Query: 101 NIVRLLDVLTTGRYVYLVFEYLDL--------DLGSFIRKHTIT---------------- 136
NI+RL VYL+ EY L L F + T T
Sbjct: 72 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 131
Query: 137 ----SIRPH-----------IKEVGSPYKAPESR---------------IRSSVYSTPHD 166
I+P I + G AP SR I ++ D
Sbjct: 132 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVD 191
Query: 167 VWAVGCIFAEMVSGKPLF 184
+W++G + E + GKP F
Sbjct: 192 LWSLGVLCYEFLVGKPPF 209
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 124 LDLGSFIRKHTITSIRPHIKEVGSPY-KAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKP 182
L L F + P++ + S Y +APE ++ Y++ DVW+ GC+ AE++ G+P
Sbjct: 162 LKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 221
Query: 183 LFP 185
+FP
Sbjct: 222 IFP 224
Score = 35.4 bits (80), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 42/70 (60%), Gaps = 6/70 (8%)
Query: 36 EKVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLK 95
++ ++ +Y + IG G FG VY+ ++G+ VAIK + +Q++ + + +++
Sbjct: 15 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDK-----RFKNRELQIMR 68
Query: 96 ELEHDNIVRL 105
+L+H NIVRL
Sbjct: 69 KLDHCNIVRL 78
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 124 LDLGSFIRKHTITSIRPHIKEVGSPY-KAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKP 182
L L F + P++ + S Y +APE ++ Y++ DVW+ GC+ AE++ G+P
Sbjct: 163 LKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 222
Query: 183 LFP 185
+FP
Sbjct: 223 IFP 225
Score = 35.4 bits (80), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 42/70 (60%), Gaps = 6/70 (8%)
Query: 36 EKVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLK 95
++ ++ +Y + IG G FG VY+ ++G+ VAIK + +Q++ + + +++
Sbjct: 16 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDK-----RFKNRELQIMR 69
Query: 96 ELEHDNIVRL 105
+L+H NIVRL
Sbjct: 70 KLDHCNIVRL 79
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 48/81 (59%), Gaps = 7/81 (8%)
Query: 44 KVVEKIGQGVFGEVYKCLNLETG-KKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
K+VE++G G FGEV+ + G KVA+K + + P +A +L+K+L+H +
Sbjct: 16 KLVERLGAGQFGEVW--MGYYNGHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRL 70
Query: 103 VRLLDVLTTGRYVYLVFEYLD 123
VRL V+T +Y++ EY++
Sbjct: 71 VRLYAVVTQ-EPIYIITEYME 90
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 124 LDLGSFIRKHTITSIRPHIKEVGSPY-KAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKP 182
L L F + P++ + S Y +APE ++ Y++ DVW+ GC+ AE++ G+P
Sbjct: 166 LKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 225
Query: 183 LFP 185
+FP
Sbjct: 226 IFP 228
Score = 35.4 bits (80), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 42/70 (60%), Gaps = 6/70 (8%)
Query: 36 EKVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLK 95
++ ++ +Y + IG G FG VY+ ++G+ VAIK + +Q++ + + +++
Sbjct: 19 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDK-----RFKNRELQIMR 72
Query: 96 ELEHDNIVRL 105
+L+H NIVRL
Sbjct: 73 KLDHCNIVRL 82
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 124 LDLGSFIRKHTITSIRPHIKEVGSPY-KAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKP 182
L L F + P++ + S Y +APE ++ Y++ DVW+ GC+ AE++ G+P
Sbjct: 162 LKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 221
Query: 183 LFP 185
+FP
Sbjct: 222 IFP 224
Score = 35.4 bits (80), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 42/70 (60%), Gaps = 6/70 (8%)
Query: 36 EKVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLK 95
++ ++ +Y + IG G FG VY+ ++G+ VAIK + +Q++ + + +++
Sbjct: 15 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDK-----RFKNRELQIMR 68
Query: 96 ELEHDNIVRL 105
+L+H NIVRL
Sbjct: 69 KLDHCNIVRL 78
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 72/198 (36%), Gaps = 55/198 (27%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMI-NIQNEPEGVPSYLIAGVSLLKELEHD 100
++++ +G+G FG VY ++ +A+K++ Q E GV L V + L H
Sbjct: 12 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 71
Query: 101 NIVRLLDVLTTGRYVYLVFEYLDL--------DLGSFIRKHTIT---------------- 136
NI+RL VYL+ EY L L F + T T
Sbjct: 72 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 131
Query: 137 ----SIRPH-----------IKEVGSPYKAPESR---------------IRSSVYSTPHD 166
I+P I + G AP SR I ++ D
Sbjct: 132 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVD 191
Query: 167 VWAVGCIFAEMVSGKPLF 184
+W++G + E + GKP F
Sbjct: 192 LWSLGVLCYEFLVGKPPF 209
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 45/76 (59%), Gaps = 3/76 (3%)
Query: 47 EKIGQ-GVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRL 105
E IG+ G FG+VYK N ET A K+I+ ++E E + Y++ + +L +H NIV+L
Sbjct: 15 EIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSE-EELEDYMVE-IDILASCDHPNIVKL 72
Query: 106 LDVLTTGRYVYLVFEY 121
LD ++++ E+
Sbjct: 73 LDAFYYENNLWILIEF 88
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 124 LDLGSFIRKHTITSIRPHIKEVGSPY-KAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKP 182
L L F + P++ + S Y +APE ++ Y++ DVW+ GC+ AE++ G+P
Sbjct: 162 LKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 221
Query: 183 LFP 185
+FP
Sbjct: 222 IFP 224
Score = 35.4 bits (80), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 42/70 (60%), Gaps = 6/70 (8%)
Query: 36 EKVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLK 95
++ ++ +Y + IG G FG VY+ ++G+ VAIK + +Q++ + + +++
Sbjct: 15 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDK-----RFKNRELQIMR 68
Query: 96 ELEHDNIVRL 105
+L+H NIVRL
Sbjct: 69 KLDHCNIVRL 78
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 124 LDLGSFIRKHTITSIRPHIKEVGSPY-KAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKP 182
L L F + P++ + S Y +APE ++ Y++ DVW+ GC+ AE++ G+P
Sbjct: 162 LKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 221
Query: 183 LFP 185
+FP
Sbjct: 222 IFP 224
Score = 35.4 bits (80), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 42/70 (60%), Gaps = 6/70 (8%)
Query: 36 EKVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLK 95
++ ++ +Y + IG G FG VY+ ++G+ VAIK + +Q + ++ + +++
Sbjct: 15 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQGK-----AFKNRELQIMR 68
Query: 96 ELEHDNIVRL 105
+L+H NIVRL
Sbjct: 69 KLDHCNIVRL 78
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 48/81 (59%), Gaps = 7/81 (8%)
Query: 44 KVVEKIGQGVFGEVYKCLNLETG-KKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
K+VE++G G FGEV+ + G KVA+K + + P +A +L+K+L+H +
Sbjct: 12 KLVERLGAGQFGEVW--MGYYNGHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRL 66
Query: 103 VRLLDVLTTGRYVYLVFEYLD 123
VRL V+T +Y++ EY++
Sbjct: 67 VRLYAVVTQ-EPIYIITEYME 86
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 124 LDLGSFIRKHTITSIRPHIKEVGSPY-KAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKP 182
L L F + P++ + S Y +APE ++ Y++ DVW+ GC+ AE++ G+P
Sbjct: 174 LKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 233
Query: 183 LFP 185
+FP
Sbjct: 234 IFP 236
Score = 35.4 bits (80), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 42/70 (60%), Gaps = 6/70 (8%)
Query: 36 EKVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLK 95
++ ++ +Y + IG G FG VY+ ++G+ VAIK + +Q++ + + +++
Sbjct: 27 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDK-----RFKNRELQIMR 80
Query: 96 ELEHDNIVRL 105
+L+H NIVRL
Sbjct: 81 KLDHCNIVRL 90
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 124 LDLGSFIRKHTITSIRPHIKEVGSPY-KAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKP 182
L L F + P++ + S Y +APE ++ Y++ DVW+ GC+ AE++ G+P
Sbjct: 181 LKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 240
Query: 183 LFP 185
+FP
Sbjct: 241 IFP 243
Score = 35.4 bits (80), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 42/70 (60%), Gaps = 6/70 (8%)
Query: 36 EKVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLK 95
++ ++ +Y + IG G FG VY+ ++G+ VAIK + +Q++ + + +++
Sbjct: 34 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDK-----RFKNRELQIMR 87
Query: 96 ELEHDNIVRL 105
+L+H NIVRL
Sbjct: 88 KLDHCNIVRL 97
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 79/205 (38%), Gaps = 66/205 (32%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN--IQNEPEGVPSYLIAGVSLLKELEHD 100
Y+ ++ IG G G V + + VAIK ++ QN+ +Y + L+K + H
Sbjct: 19 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY--RELVLMKCVNHK 76
Query: 101 NIVRLLDVLTTGRY------VYLVFEYLDLDLG------------SFIRKHTITSIRPHI 142
NI+ LL+V T + VYLV E +D +L S++ + I+ H+
Sbjct: 77 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIK-HL 135
Query: 143 KEVG------------------------------------SPY------KAPESRIRSSV 160
G +PY +APE I
Sbjct: 136 HSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV-ILGMG 194
Query: 161 YSTPHDVWAVGCIFAEMVSGKPLFP 185
Y D+W+VGCI EMV K LFP
Sbjct: 195 YKENVDIWSVGCIMGEMVRHKILFP 219
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 82/204 (40%), Gaps = 64/204 (31%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN--IQNEPEGVPSYLIAGVSLLKELEHD 100
Y+ ++ IG G G V + + VAIK ++ QN+ +Y + L+K + H
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY--RELVLMKCVNHK 84
Query: 101 NIVRLLDVLTTGRY------VYLVFEYLDLDLGSFIR-------------------KHTI 135
NI+ LL+V T + VYLV E +D +L I+ KH
Sbjct: 85 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 144
Query: 136 TS------IRP-----------HIKEVG-----------SPY------KAPESRIRSSVY 161
++ ++P I + G +PY +APE I Y
Sbjct: 145 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV-ILGMGY 203
Query: 162 STPHDVWAVGCIFAEMVSGKPLFP 185
D+W+VGCI EMV K LFP
Sbjct: 204 KENVDIWSVGCIMGEMVRHKILFP 227
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 124 LDLGSFIRKHTITSIRPHIKEVGSPY-KAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKP 182
L L F + P++ + S Y +APE ++ Y++ DVW+ GC+ AE++ G+P
Sbjct: 170 LKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 229
Query: 183 LFP 185
+FP
Sbjct: 230 IFP 232
Score = 35.4 bits (80), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 42/70 (60%), Gaps = 6/70 (8%)
Query: 36 EKVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLK 95
++ ++ +Y + IG G FG VY+ ++G+ VAIK + +Q++ + + +++
Sbjct: 23 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDK-----RFKNRELQIMR 76
Query: 96 ELEHDNIVRL 105
+L+H NIVRL
Sbjct: 77 KLDHCNIVRL 86
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 82/204 (40%), Gaps = 64/204 (31%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN--IQNEPEGVPSYLIAGVSLLKELEHD 100
Y+ ++ IG G G V + + VAIK ++ QN+ +Y + L+K + H
Sbjct: 25 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY--RELVLMKCVNHK 82
Query: 101 NIVRLLDVLTTGRY------VYLVFEYLDLDLGSFIR-------------------KHTI 135
NI+ LL+V T + VYLV E +D +L I+ KH
Sbjct: 83 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 142
Query: 136 TS------IRP-----------HIKEVG-----------SPY------KAPESRIRSSVY 161
++ ++P I + G +PY +APE I Y
Sbjct: 143 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV-ILGMGY 201
Query: 162 STPHDVWAVGCIFAEMVSGKPLFP 185
D+W+VGCI EMV K LFP
Sbjct: 202 KENVDIWSVGCIMGEMVRHKILFP 225
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 82/204 (40%), Gaps = 64/204 (31%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN--IQNEPEGVPSYLIAGVSLLKELEHD 100
Y+ ++ IG G G V + + VAIK ++ QN+ +Y + L+K + H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY--RELVLMKCVNHK 83
Query: 101 NIVRLLDVLTTGRY------VYLVFEYLDLDLGSFIR-------------------KHTI 135
NI+ LL+V T + VYLV E +D +L I+ KH
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLH 143
Query: 136 TS------IRP-----------HIKEVG-----------SPY------KAPESRIRSSVY 161
++ ++P I + G +PY +APE I Y
Sbjct: 144 SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV-ILGMGY 202
Query: 162 STPHDVWAVGCIFAEMVSGKPLFP 185
D+W+VGCI EMV K LFP
Sbjct: 203 KENVDIWSVGCIMGEMVRHKILFP 226
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 79/205 (38%), Gaps = 66/205 (32%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN--IQNEPEGVPSYLIAGVSLLKELEHD 100
Y+ ++ IG G G V + + VAIK ++ QN+ +Y + L+K + H
Sbjct: 64 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY--RELVLMKCVNHK 121
Query: 101 NIVRLLDVLTTGRY------VYLVFEYLDLDLG------------SFIRKHTITSIRPHI 142
NI+ LL+V T + VYLV E +D +L S++ + I+ H+
Sbjct: 122 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK-HL 180
Query: 143 KEVG------------------------------------SPY------KAPESRIRSSV 160
G +PY +APE I
Sbjct: 181 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV-ILGMG 239
Query: 161 YSTPHDVWAVGCIFAEMVSGKPLFP 185
Y D+W+VGCI EMV K LFP
Sbjct: 240 YKENVDIWSVGCIMGEMVRHKILFP 264
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 124 LDLGSFIRKHTITSIRPHIKEVGSPY-KAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKP 182
L L F + P++ + S Y +APE ++ Y++ DVW+ GC+ AE++ G+P
Sbjct: 174 LKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 233
Query: 183 LFP 185
+FP
Sbjct: 234 IFP 236
Score = 35.4 bits (80), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 42/70 (60%), Gaps = 6/70 (8%)
Query: 36 EKVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLK 95
++ ++ +Y + IG G FG VY+ ++G+ VAIK + +Q++ + + +++
Sbjct: 27 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDK-----RFKNRELQIMR 80
Query: 96 ELEHDNIVRL 105
+L+H NIVRL
Sbjct: 81 KLDHCNIVRL 90
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 43.9 bits (102), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 82/204 (40%), Gaps = 64/204 (31%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN--IQNEPEGVPSYLIAGVSLLKELEHD 100
Y+ ++ IG G G V + + VAIK ++ QN+ +Y + L+K + H
Sbjct: 19 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY--RELVLMKCVNHK 76
Query: 101 NIVRLLDVLTTGRY------VYLVFEYLDLDLGSFIR-------------------KHTI 135
NI+ LL+V T + VYLV E +D +L I+ KH
Sbjct: 77 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 136
Query: 136 TS------IRP-----------HIKEVG-----------SPY------KAPESRIRSSVY 161
++ ++P I + G +PY +APE I Y
Sbjct: 137 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV-ILGMGY 195
Query: 162 STPHDVWAVGCIFAEMVSGKPLFP 185
D+W+VGCI EMV K LFP
Sbjct: 196 KENVDIWSVGCIMGEMVRHKILFP 219
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 27/37 (72%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFP 185
Y+APE ++ Y++ DVW+ GC+ AE++ G+P+FP
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFP 224
Score = 35.4 bits (80), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 42/70 (60%), Gaps = 6/70 (8%)
Query: 36 EKVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLK 95
++ ++ +Y + IG G FG VY+ ++G+ VAIK + +Q++ + + +++
Sbjct: 15 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDK-----RFKNRELQIMR 68
Query: 96 ELEHDNIVRL 105
+L+H NIVRL
Sbjct: 69 KLDHCNIVRL 78
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 82/204 (40%), Gaps = 64/204 (31%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN--IQNEPEGVPSYLIAGVSLLKELEHD 100
Y+ ++ IG G G V + + VAIK ++ QN+ +Y + L+K + H
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY--RELVLMKCVNHK 77
Query: 101 NIVRLLDVLTTGRY------VYLVFEYLDLDLGSFIR-------------------KHTI 135
NI+ LL+V T + VYLV E +D +L I+ KH
Sbjct: 78 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 137
Query: 136 TS------IRP-----------HIKEVG-----------SPY------KAPESRIRSSVY 161
++ ++P I + G +PY +APE I Y
Sbjct: 138 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV-ILGMGY 196
Query: 162 STPHDVWAVGCIFAEMVSGKPLFP 185
D+W+VGCI EMV K LFP
Sbjct: 197 KENVDIWSVGCIMGEMVRHKILFP 220
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 27/37 (72%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFP 185
Y+APE ++ Y++ DVW+ GC+ AE++ G+P+FP
Sbjct: 193 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFP 229
Score = 35.4 bits (80), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 42/70 (60%), Gaps = 6/70 (8%)
Query: 36 EKVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLK 95
++ ++ +Y + IG G FG VY+ ++G+ VAIK + +Q++ + + +++
Sbjct: 20 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDK-----RFKNRELQIMR 73
Query: 96 ELEHDNIVRL 105
+L+H NIVRL
Sbjct: 74 KLDHCNIVRL 83
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 82/204 (40%), Gaps = 64/204 (31%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN--IQNEPEGVPSYLIAGVSLLKELEHD 100
Y+ ++ IG G G V + + VAIK ++ QN+ +Y + L+K + H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY--RELVLMKCVNHK 83
Query: 101 NIVRLLDVLTTGRY------VYLVFEYLDLDLGSFIR-------------------KHTI 135
NI+ LL+V T + VYLV E +D +L I+ KH
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 136 TS------IRP-----------HIKEVG-----------SPY------KAPESRIRSSVY 161
++ ++P I + G +PY +APE I Y
Sbjct: 144 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV-ILGMGY 202
Query: 162 STPHDVWAVGCIFAEMVSGKPLFP 185
D+W+VGCI EMV K LFP
Sbjct: 203 KENVDIWSVGCIMGEMVRHKILFP 226
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 82/204 (40%), Gaps = 64/204 (31%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN--IQNEPEGVPSYLIAGVSLLKELEHD 100
Y+ ++ IG G G V + + VAIK ++ QN+ +Y + L+K + H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY--RELVLMKCVNHK 83
Query: 101 NIVRLLDVLTTGRY------VYLVFEYLDLDLGSFIR-------------------KHTI 135
NI+ LL+V T + VYLV E +D +L I+ KH
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 136 TS------IRP-----------HIKEVG-----------SPY------KAPESRIRSSVY 161
++ ++P I + G +PY +APE I Y
Sbjct: 144 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV-ILGMGY 202
Query: 162 STPHDVWAVGCIFAEMVSGKPLFP 185
D+W+VGCI EMV K LFP
Sbjct: 203 KENVDIWSVGCIMGEMVRHKILFP 226
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 5/91 (5%)
Query: 34 QMEKVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN---IQNEPEGVPSYLIA- 89
+ E V+D +Y++ E++G G F V KC TGK+ A K I + + GV I
Sbjct: 6 RQEDVED-HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIER 64
Query: 90 GVSLLKELEHDNIVRLLDVLTTGRYVYLVFE 120
V++L+E+ H NI+ L D+ V L+ E
Sbjct: 65 EVNILREIRHPNIITLHDIFENKTDVVLILE 95
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 27/37 (72%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFP 185
Y+APE ++ Y++ DVW+ GC+ AE++ G+P+FP
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFP 224
Score = 35.4 bits (80), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 42/70 (60%), Gaps = 6/70 (8%)
Query: 36 EKVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLK 95
++ ++ +Y + IG G FG VY+ ++G+ VAIK + +Q + ++ + +++
Sbjct: 15 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQGK-----AFKNRELQIMR 68
Query: 96 ELEHDNIVRL 105
+L+H NIVRL
Sbjct: 69 KLDHCNIVRL 78
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 27/37 (72%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFP 185
Y+APE ++ Y++ DVW+ GC+ AE++ G+P+FP
Sbjct: 201 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFP 237
Score = 35.4 bits (80), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 42/70 (60%), Gaps = 6/70 (8%)
Query: 36 EKVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLK 95
++ ++ +Y + IG G FG VY+ ++G+ VAIK + +Q++ + + +++
Sbjct: 28 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDK-----RFKNRELQIMR 81
Query: 96 ELEHDNIVRL 105
+L+H NIVRL
Sbjct: 82 KLDHCNIVRL 91
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 48/81 (59%), Gaps = 7/81 (8%)
Query: 44 KVVEKIGQGVFGEVYKCLNLETG-KKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
K+VE++G G FGEV+ + G KVA+K + + P +A +L+K+L+H +
Sbjct: 11 KLVERLGAGQFGEVW--MGYYNGHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRL 65
Query: 103 VRLLDVLTTGRYVYLVFEYLD 123
VRL V+T +Y++ EY++
Sbjct: 66 VRLYAVVTQ-EPIYIITEYME 85
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 82/204 (40%), Gaps = 64/204 (31%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN--IQNEPEGVPSYLIAGVSLLKELEHD 100
Y+ ++ IG G G V + + VAIK ++ QN+ +Y + L+K + H
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY--RELVLMKCVNHK 84
Query: 101 NIVRLLDVLTTGRY------VYLVFEYLDLDLGSFIR-------------------KHTI 135
NI+ LL+V T + VYLV E +D +L I+ KH
Sbjct: 85 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 144
Query: 136 TS------IRP-----------HIKEVG-----------SPY------KAPESRIRSSVY 161
++ ++P I + G +PY +APE I Y
Sbjct: 145 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV-ILGMGY 203
Query: 162 STPHDVWAVGCIFAEMVSGKPLFP 185
D+W+VGCI EMV K LFP
Sbjct: 204 KENVDIWSVGCIMGEMVRHKILFP 227
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 27/37 (72%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFP 185
Y+APE ++ Y++ DVW+ GC+ AE++ G+P+FP
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFP 224
Score = 35.4 bits (80), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 42/70 (60%), Gaps = 6/70 (8%)
Query: 36 EKVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLK 95
++ ++ +Y + IG G FG VY+ ++G+ VAIK + +Q + ++ + +++
Sbjct: 15 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQGK-----AFKNRELQIMR 68
Query: 96 ELEHDNIVRL 105
+L+H NIVRL
Sbjct: 69 KLDHCNIVRL 78
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 82/204 (40%), Gaps = 64/204 (31%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN--IQNEPEGVPSYLIAGVSLLKELEHD 100
Y+ ++ IG G G V + + VAIK ++ QN+ +Y + L+K + H
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY--RELVLMKCVNHK 77
Query: 101 NIVRLLDVLTTGRY------VYLVFEYLDLDLGSFIR-------------------KHTI 135
NI+ LL+V T + VYLV E +D +L I+ KH
Sbjct: 78 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH 137
Query: 136 TS------IRP-----------HIKEVG-----------SPY------KAPESRIRSSVY 161
++ ++P I + G +PY +APE I Y
Sbjct: 138 SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV-ILGMGY 196
Query: 162 STPHDVWAVGCIFAEMVSGKPLFP 185
D+W+VGCI EMV K LFP
Sbjct: 197 KENVDIWSVGCIMGEMVRHKILFP 220
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 124 LDLGSFIRKHTITSIRPHIKEVGSPY-KAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKP 182
L L F + P++ + S Y +APE ++ Y++ DVW+ GC+ AE++ G+P
Sbjct: 196 LKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQP 255
Query: 183 LFP 185
+FP
Sbjct: 256 IFP 258
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 42/70 (60%), Gaps = 6/70 (8%)
Query: 36 EKVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLK 95
++ ++ +Y + IG G FG VY+ ++G+ VAIK + +Q++ + + +++
Sbjct: 49 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDK-----RFKNRELQIMR 102
Query: 96 ELEHDNIVRL 105
+L+H NIVRL
Sbjct: 103 KLDHCNIVRL 112
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 27/37 (72%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFP 185
Y+APE ++ Y++ DVW+ GC+ AE++ G+P+FP
Sbjct: 216 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFP 252
Score = 35.4 bits (80), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 42/70 (60%), Gaps = 6/70 (8%)
Query: 36 EKVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLK 95
++ ++ +Y + IG G FG VY+ ++G+ VAIK + +Q++ + + +++
Sbjct: 43 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDK-----RFKNRELQIMR 96
Query: 96 ELEHDNIVRL 105
+L+H NIVRL
Sbjct: 97 KLDHCNIVRL 106
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 79/205 (38%), Gaps = 66/205 (32%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN--IQNEPEGVPSYLIAGVSLLKELEHD 100
Y+ ++ IG G G V + + VAIK ++ QN+ +Y + L+K + H
Sbjct: 64 YQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAY--RELVLMKCVNHK 121
Query: 101 NIVRLLDVLTTGRY------VYLVFEYLDLDLG------------SFIRKHTITSIRPHI 142
NI+ LL+V T + VYLV E +D +L S++ + I+ H+
Sbjct: 122 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK-HL 180
Query: 143 KEVG------------------------------------SPY------KAPESRIRSSV 160
G +PY +APE I
Sbjct: 181 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV-ILGMG 239
Query: 161 YSTPHDVWAVGCIFAEMVSGKPLFP 185
Y D+W+VGCI EMV K LFP
Sbjct: 240 YKENVDIWSVGCIMGEMVRHKILFP 264
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 43.5 bits (101), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 27/37 (72%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFP 185
Y+APE ++ Y++ DVW+ GC+ AE++ G+P+FP
Sbjct: 267 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFP 303
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 42/70 (60%), Gaps = 6/70 (8%)
Query: 36 EKVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLK 95
++ ++ +Y + IG G FG VY+ ++G+ VAIK + +Q++ + + +++
Sbjct: 94 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDK-----RFKNRELQIMR 147
Query: 96 ELEHDNIVRL 105
+L+H NIVRL
Sbjct: 148 KLDHCNIVRL 157
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 43.5 bits (101), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 27/37 (72%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFP 185
Y+APE ++ Y++ DVW+ GC+ AE++ G+P+FP
Sbjct: 222 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFP 258
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 42/70 (60%), Gaps = 6/70 (8%)
Query: 36 EKVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLK 95
++ ++ +Y + IG G FG VY+ ++G+ VAIK + +Q++ + + +++
Sbjct: 49 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDK-----RFKNRELQIMR 102
Query: 96 ELEHDNIVRL 105
+L+H NIVRL
Sbjct: 103 KLDHCNIVRL 112
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 43.5 bits (101), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 38 VKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKEL 97
V+DW+ +V+ +G+G GEV +N T + VA+K+++++ + P + + + K L
Sbjct: 5 VEDWD--LVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINKML 61
Query: 98 EHDNIVRLLDVLTTGRYVYLVFEY 121
H+N+V+ G YL EY
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEY 85
Score = 33.5 bits (75), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 148 PYKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGK 181
PY APE R ++ P DVW+ G + M++G+
Sbjct: 171 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 43.5 bits (101), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 14/103 (13%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN---------IQNEPEGVPSYLIAGVS 92
Y + +G G FG V+ ++ E K+V +K I I++ G + IA
Sbjct: 25 KYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIA--- 81
Query: 93 LLKELEHDNIVRLLDVLTTGRYVYLVFEY--LDLDLGSFIRKH 133
+L +EH NI+++LD+ + LV E LDL +FI +H
Sbjct: 82 ILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRH 124
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 43.5 bits (101), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 27/37 (72%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFP 185
Y+APE ++ Y++ DVW+ GC+ AE++ G+P+FP
Sbjct: 224 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFP 260
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 42/70 (60%), Gaps = 6/70 (8%)
Query: 36 EKVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLK 95
++ ++ +Y + IG G FG VY+ ++G+ VAIK + +Q++ + + +++
Sbjct: 51 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDK-----RFKNRELQIMR 104
Query: 96 ELEHDNIVRL 105
+L+H NIVRL
Sbjct: 105 KLDHCNIVRL 114
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 43.5 bits (101), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 27/37 (72%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFP 185
Y+APE ++ Y++ DVW+ GC+ AE++ G+P+FP
Sbjct: 226 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFP 262
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 42/70 (60%), Gaps = 6/70 (8%)
Query: 36 EKVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLK 95
++ ++ +Y + IG G FG VY+ ++G+ VAIK + +Q++ + + +++
Sbjct: 53 DRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV-LQDK-----RFKNRELQIMR 106
Query: 96 ELEHDNIVRL 105
+L+H NIVRL
Sbjct: 107 KLDHCNIVRL 116
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 43.5 bits (101), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 71/198 (35%), Gaps = 55/198 (27%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMI-NIQNEPEGVPSYLIAGVSLLKELEHD 100
++++ +G+G FG VY + +A+K++ Q E GV L V + L H
Sbjct: 6 DFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 65
Query: 101 NIVRLLDVLTTGRYVYLVFEYLDL--------DLGSFIRKHTIT---------------- 136
NI+RL VYL+ EY L L F + T T
Sbjct: 66 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKR 125
Query: 137 ----SIRPH-----------IKEVGSPYKAPESR---------------IRSSVYSTPHD 166
I+P I + G AP SR I ++ D
Sbjct: 126 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVD 185
Query: 167 VWAVGCIFAEMVSGKPLF 184
+W++G + E + GKP F
Sbjct: 186 LWSLGVLCYEFLVGKPPF 203
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 46/84 (54%), Gaps = 3/84 (3%)
Query: 38 VKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKEL 97
V+DW+ +V+ +G+G +GEV +N T + VA+K+++++ + P + + + L
Sbjct: 6 VEDWD--LVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVD-CPENIKKEICINAML 62
Query: 98 EHDNIVRLLDVLTTGRYVYLVFEY 121
H+N+V+ G YL EY
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEY 86
Score = 33.5 bits (75), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 148 PYKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGK 181
PY APE R ++ P DVW+ G + M++G+
Sbjct: 172 PYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Query: 34 QMEKVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN---IQNEPEGVPSYLIA- 89
+ E V D+ Y E++G GVF V KC TG + A K I ++ GV I
Sbjct: 5 RQENVDDY-YDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 90 GVSLLKELEHDNIVRLLDVLTTGRYVYLVFE 120
VS+LKE++H N++ L +V V L+ E
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILE 94
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 47 EKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRLL 106
E+IG+G FGEV+ VA+K + P + + + +LK+ H NIVRL+
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCR-ETLPPDLKAKFLQEARILKQYSHPNIVRLI 178
Query: 107 DVLTTGRYVYLVFEYLD-LDLGSFIR 131
V T + +Y+V E + D +F+R
Sbjct: 179 GVCTQKQPIYIVMELVQGGDFLTFLR 204
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 47 EKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRLL 106
E+IG+G FGEV+ VA+K + P + + + +LK+ H NIVRL+
Sbjct: 120 EQIGRGNFGEVFSGRLRADNTLVAVKSCR-ETLPPDLKAKFLQEARILKQYSHPNIVRLI 178
Query: 107 DVLTTGRYVYLVFEYLD-LDLGSFIR 131
V T + +Y+V E + D +F+R
Sbjct: 179 GVCTQKQPIYIVMELVQGGDFLTFLR 204
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 57/110 (51%), Gaps = 9/110 (8%)
Query: 31 GSEQMEKVKDWNYKVVEKIGQGVFGEVYKC----LNLETGKKVAIKMINIQNEPEGVPSY 86
GS + ++ + K ++++G+G FG V C L TG+ VA+K +Q+ E
Sbjct: 1 GSRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK--KLQHSTEEHLRD 58
Query: 87 LIAGVSLLKELEHDNIVRLLDVLTTG--RYVYLVFEYLDL-DLGSFIRKH 133
+ +LK L+HDNIV+ V + R + L+ EYL L +++KH
Sbjct: 59 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH 108
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 85/212 (40%), Gaps = 66/212 (31%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN--IQNEPEGVPSYLIAGVSLLKELEHD 100
Y+ ++ IG G G V + + VAIK ++ QN+ +Y + L+K + H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY--RELVLMKVVNHK 83
Query: 101 NIVRLLDVLTTGRY------VYLVFEYLDLDLGSFIR-------------------KHTI 135
NI+ LL+V T + VY+V E +D +L I+ KH
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLH 143
Query: 136 TS------IRP-----------HIKEVG-----------SPY------KAPESRIRSSVY 161
++ ++P I + G +PY +APE I Y
Sbjct: 144 SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV-ILGMGY 202
Query: 162 STPHDVWAVGCIFAEMVSGKPLFPCGKKDHLS 193
D+W+VGCI EM+ G LFP DH+
Sbjct: 203 KENVDIWSVGCIMGEMIKGGVLFPG--TDHID 232
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
Y V E IG G + E +C++ T + A+K+I+ PS I LL+ +H N
Sbjct: 28 GYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRD---PSEEIE--ILLRYGQHPN 82
Query: 102 IVRLLDVLTTGRYVYLVFEYL 122
I+ L DV G++VYLV E +
Sbjct: 83 IITLKDVYDDGKHVYLVTELM 103
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 71/198 (35%), Gaps = 55/198 (27%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMI-NIQNEPEGVPSYLIAGVSLLKELEHD 100
++++ +G+G FG VY + +A+K++ Q E GV L V + L H
Sbjct: 9 DFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 68
Query: 101 NIVRLLDVLTTGRYVYLVFEYLDL--------DLGSFIRKHTIT---------------- 136
NI+RL VYL+ EY L L F + T T
Sbjct: 69 NILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKK 128
Query: 137 ----SIRPH-----------IKEVGSPYKAPESR---------------IRSSVYSTPHD 166
I+P I + G AP SR I ++ D
Sbjct: 129 VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVD 188
Query: 167 VWAVGCIFAEMVSGKPLF 184
+W++G + E + GKP F
Sbjct: 189 LWSLGVLCYEFLVGKPPF 206
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 56/105 (53%), Gaps = 2/105 (1%)
Query: 31 GSEQMEKVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQN-EPEGVPSYLIA 89
GS+ +VK +Y + + +G G FG+V + TG KVA+K++N Q V +
Sbjct: 1 GSKHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKR 60
Query: 90 GVSLLKELEHDNIVRLLDVLTTGRYVYLVFEYLD-LDLGSFIRKH 133
+ LK H +I++L V++T ++V EY+ +L +I KH
Sbjct: 61 EIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKH 105
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y V E IG G + E +C++ T + A+K+I+ PS I LL+ +H NI
Sbjct: 29 YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRD---PSEEIE--ILLRYGQHPNI 83
Query: 103 VRLLDVLTTGRYVYLVFEYL 122
+ L DV G++VYLV E +
Sbjct: 84 ITLKDVYDDGKHVYLVTELM 103
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 74/206 (35%), Gaps = 58/206 (28%)
Query: 37 KVKDW---NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMI-NIQNEPEGVPSYLIAGVS 92
K + W ++++ +G+G FG VY ++ +A+K++ Q E GV L V
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 93 LLKELEHDNIVRLLDVLTTGRYVYLVFEYLDL--------DLGSFIRKHTIT-------- 136
+ L H NI+RL VYL+ EY L F + T T
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANA 125
Query: 137 ------------SIRPH-----------IKEVGSPYKAPESR---------------IRS 158
I+P I + G AP SR I
Sbjct: 126 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMIEG 185
Query: 159 SVYSTPHDVWAVGCIFAEMVSGKPLF 184
++ D+W++G + E + GKP F
Sbjct: 186 RMHDEKVDLWSLGVLCYEFLVGKPPF 211
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 81/193 (41%), Gaps = 58/193 (30%)
Query: 46 VEKIGQGVFGEVYKCLNLETGKKVAIKMINI----------QNE------------PEGV 83
+EKIG+G FGEV+K ++ T K VAIK+I++ Q E +
Sbjct: 32 LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 91
Query: 84 PSYL-----------IAGVSLLKELEHD------------NIVRLLDVLTTGRYVY---- 116
SYL + G S L LE I++ LD L + + ++
Sbjct: 92 GSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIK 151
Query: 117 ----LVFEYLDLDLGSFIRKHTITSIRPHIKE---VGSPYKAPESRIRSSVYSTPHDVWA 169
L+ E+ ++ L F +T + IK VG+P+ I+ S Y + D+W+
Sbjct: 152 AANVLLSEHGEVKLADFGVAGQLTDTQ--IKRNTFVGTPFWMAPEVIKQSAYDSKADIWS 209
Query: 170 VGCIFAEMVSGKP 182
+G E+ G+P
Sbjct: 210 LGITAIELARGEP 222
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 55/106 (51%), Gaps = 6/106 (5%)
Query: 31 GSEQMEKVKDWNY-KVVEKIGQGVFGEVYKCLNLETGKK---VAIKMINIQNEPEGVPSY 86
GS + K D +Y K+ E IG G FGEV + GKK VAIK + E
Sbjct: 3 GSMEFAKEIDVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLK-GGYTERQRRE 61
Query: 87 LIAGVSLLKELEHDNIVRLLDVLTTGRYVYLVFEYLDLD-LGSFIR 131
++ S++ + EH NI+RL V+T V ++ E+++ L SF+R
Sbjct: 62 FLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLR 107
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 56/105 (53%), Gaps = 2/105 (1%)
Query: 31 GSEQMEKVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQN-EPEGVPSYLIA 89
GS+ +VK +Y + + +G G FG+V + TG KVA+K++N Q V +
Sbjct: 1 GSKHDGRVKIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKR 60
Query: 90 GVSLLKELEHDNIVRLLDVLTTGRYVYLVFEYLD-LDLGSFIRKH 133
+ LK H +I++L V++T ++V EY+ +L +I KH
Sbjct: 61 EIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKH 105
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 74/206 (35%), Gaps = 58/206 (28%)
Query: 37 KVKDW---NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMI-NIQNEPEGVPSYLIAGVS 92
K + W ++++ +G+G FG VY ++ +A+K++ Q E GV L V
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 93 LLKELEHDNIVRLLDVLTTGRYVYLVFEYLDL--------DLGSFIRKHTIT-------- 136
+ L H NI+RL VYL+ EY L F + T T
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANA 125
Query: 137 ------------SIRPH-----------IKEVGSPYKAPESR---------------IRS 158
I+P I + G AP SR I
Sbjct: 126 LSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLXGTLDYLPPEMIEG 185
Query: 159 SVYSTPHDVWAVGCIFAEMVSGKPLF 184
++ D+W++G + E + GKP F
Sbjct: 186 RMHDEKVDLWSLGVLCYEFLVGKPPF 211
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 81/193 (41%), Gaps = 58/193 (30%)
Query: 46 VEKIGQGVFGEVYKCLNLETGKKVAIKMINI----------QNE------------PEGV 83
+EKIG+G FGEV+K ++ T K VAIK+I++ Q E +
Sbjct: 12 LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 71
Query: 84 PSYL-----------IAGVSLLKELEHD------------NIVRLLDVLTTGRYVY---- 116
SYL + G S L LE I++ LD L + + ++
Sbjct: 72 GSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIK 131
Query: 117 ----LVFEYLDLDLGSFIRKHTITSIRPHIKE---VGSPYKAPESRIRSSVYSTPHDVWA 169
L+ E+ ++ L F +T + IK VG+P+ I+ S Y + D+W+
Sbjct: 132 AANVLLSEHGEVKLADFGVAGQLTDTQ--IKRNXFVGTPFWMAPEVIKQSAYDSKADIWS 189
Query: 170 VGCIFAEMVSGKP 182
+G E+ G+P
Sbjct: 190 LGITAIELARGEP 202
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 46 VEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRL 105
+E +G G F EV+ TGK A+K I + P S L +++LK+++H+NIV L
Sbjct: 14 MEVLGSGAFSEVFLVKQRLTGKLFALKCI--KKSPAFRDSSLENEIAVLKKIKHENIVTL 71
Query: 106 LDVLTTGRYVYLVFE 120
D+ + + YLV +
Sbjct: 72 EDIYESTTHYYLVMQ 86
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 81/193 (41%), Gaps = 58/193 (30%)
Query: 46 VEKIGQGVFGEVYKCLNLETGKKVAIKMINI----------QNE------------PEGV 83
+EKIG+G FGEV+K ++ T K VAIK+I++ Q E +
Sbjct: 27 LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 86
Query: 84 PSYL-----------IAGVSLLKELEHD------------NIVRLLDVLTTGRYVY---- 116
SYL + G S L LE I++ LD L + + ++
Sbjct: 87 GSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIK 146
Query: 117 ----LVFEYLDLDLGSFIRKHTITSIRPHIKE---VGSPYKAPESRIRSSVYSTPHDVWA 169
L+ E+ ++ L F +T + IK VG+P+ I+ S Y + D+W+
Sbjct: 147 AANVLLSEHGEVKLADFGVAGQLTDTQ--IKRNXFVGTPFWMAPEVIKQSAYDSKADIWS 204
Query: 170 VGCIFAEMVSGKP 182
+G E+ G+P
Sbjct: 205 LGITAIELARGEP 217
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 33 EQMEKVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVS 92
+Q E ++D Y + +G G F EV + T K VAIK I + EG + ++
Sbjct: 11 KQAEDIRDI-YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCI-AKKALEGKEGSMENEIA 68
Query: 93 LLKELEHDNIVRLLDVLTTGRYVYLVFE 120
+L +++H NIV L D+ +G ++YL+ +
Sbjct: 69 VLHKIKHPNIVALDDIYESGGHLYLIMQ 96
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 53/104 (50%), Gaps = 4/104 (3%)
Query: 34 QMEKVKDWNYKVVEKIGQGVFGEVY--KCLNLE-TGKKVAIKMINIQNEPEGVPSYLIAG 90
++ +K + + ++G+G FG+V+ +C NL T K+ + + +++
Sbjct: 8 HVQHIKRRDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQRE 67
Query: 91 VSLLKELEHDNIVRLLDVLTTGRYVYLVFEYLDL-DLGSFIRKH 133
LL L+H++IV+ V G + +VFEY+ DL F+R H
Sbjct: 68 AELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAH 111
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 81/193 (41%), Gaps = 58/193 (30%)
Query: 46 VEKIGQGVFGEVYKCLNLETGKKVAIKMINI----------QNE------------PEGV 83
+EKIG+G FGEV+K ++ T K VAIK+I++ Q E +
Sbjct: 12 LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYY 71
Query: 84 PSYL-----------IAGVSLLKELEHD------------NIVRLLDVLTTGRYVY---- 116
SYL + G S L LE I++ LD L + + ++
Sbjct: 72 GSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIK 131
Query: 117 ----LVFEYLDLDLGSFIRKHTITSIRPHIKE---VGSPYKAPESRIRSSVYSTPHDVWA 169
L+ E+ ++ L F +T + IK VG+P+ I+ S Y + D+W+
Sbjct: 132 AANVLLSEHGEVKLADFGVAGQLTDTQ--IKRNTFVGTPFWMAPEVIKQSAYDSKADIWS 189
Query: 170 VGCIFAEMVSGKP 182
+G E+ G+P
Sbjct: 190 LGITAIELARGEP 202
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMI-NIQNEPEGVPSYLIAGVSLLKELEHD 100
++ +V +G+G FG VY + +A+K++ Q E EGV L + + L H
Sbjct: 15 DFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHP 74
Query: 101 NIVRLLDVLTTGRYVYLVFEY 121
NI+R+ + + +YL+ E+
Sbjct: 75 NILRMYNYFHDRKRIYLMLEF 95
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 49/100 (49%), Gaps = 6/100 (6%)
Query: 37 KVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKE 96
KV D NY++ IG+G +G VY + K VAIK +N E ++ +++L
Sbjct: 25 KVPD-NYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNR 83
Query: 97 LEHDNIVRLLDV-----LTTGRYVYLVFEYLDLDLGSFIR 131
L+ D I+RL D+ L +Y+V E D DL +
Sbjct: 84 LKSDYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFK 123
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVS 179
Y+APE + Y+ D+W+ GCIFAE+++
Sbjct: 222 YRAPELILLQENYTNSIDIWSTGCIFAELLN 252
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 33 EQMEKVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVS 92
+Q E ++D Y + +G G F EV + T K VAIK I + EG + ++
Sbjct: 11 KQAEDIRDI-YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCI-AKEALEGKEGSMENEIA 68
Query: 93 LLKELEHDNIVRLLDVLTTGRYVYLVFE 120
+L +++H NIV L D+ +G ++YL+ +
Sbjct: 69 VLHKIKHPNIVALDDIYESGGHLYLIMQ 96
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 33 EQMEKVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVS 92
+Q E ++D Y + +G G F EV + T K VAIK I + EG + ++
Sbjct: 11 KQAEDIRDI-YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCI-AKEALEGKEGSMENEIA 68
Query: 93 LLKELEHDNIVRLLDVLTTGRYVYLVFE 120
+L +++H NIV L D+ +G ++YL+ +
Sbjct: 69 VLHKIKHPNIVALDDIYESGGHLYLIMQ 96
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 33 EQMEKVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVS 92
+Q E ++D Y + +G G F EV + T K VAIK I + EG + ++
Sbjct: 11 KQAEDIRDI-YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCI-AKEALEGKEGSMENEIA 68
Query: 93 LLKELEHDNIVRLLDVLTTGRYVYLVFE 120
+L +++H NIV L D+ +G ++YL+ +
Sbjct: 69 VLHKIKHPNIVALDDIYESGGHLYLIMQ 96
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 51/109 (46%), Gaps = 6/109 (5%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
NY + IG+G +G VY + T K VAIK +N E ++ +++L L+ D
Sbjct: 27 NYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDY 86
Query: 102 IVRLLDVLTTGRY-----VYLVFEYLDLDLGSFIRKHTITSIRPHIKEV 145
I+RL D++ +Y+V E D DL K I HIK +
Sbjct: 87 IIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLF-KTPIFLTEEHIKTI 134
Score = 36.2 bits (82), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVS 179
Y+APE + Y+ D+W+ GCIFAE+++
Sbjct: 217 YRAPELILLQENYTKSIDIWSTGCIFAELLN 247
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 77/209 (36%), Gaps = 57/209 (27%)
Query: 31 GSEQMEKVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMI-NIQNEPEGVPSYLIA 89
GS++ ++D++ + +G+G FG VY ++ +A+K++ Q E GV L
Sbjct: 4 GSKRQWTLEDFD--IGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRR 61
Query: 90 GVSLLKELEHDNIVRLLDVLTTGRYVYLVFEYLDL--------DLGSFIRKHTIT----- 136
V + L H NI+RL VYL+ EY L L F + T T
Sbjct: 62 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITEL 121
Query: 137 ---------------SIRPH-----------IKEVGSPYKAPESR--------------- 155
I+P I + G AP SR
Sbjct: 122 ANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEM 181
Query: 156 IRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
I ++ D+W++G + E + G P F
Sbjct: 182 IEGRMHDEKVDLWSLGVLCYEFLVGMPPF 210
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 77/209 (36%), Gaps = 57/209 (27%)
Query: 31 GSEQMEKVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMI-NIQNEPEGVPSYLIA 89
GS++ ++D++ + +G+G FG VY ++ +A+K++ Q E GV L
Sbjct: 4 GSKRQWTLEDFD--IGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRR 61
Query: 90 GVSLLKELEHDNIVRLLDVLTTGRYVYLVFEYLDL--------DLGSFIRKHTIT----- 136
V + L H NI+RL VYL+ EY L L F + T T
Sbjct: 62 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITEL 121
Query: 137 ---------------SIRPH-----------IKEVGSPYKAPESR--------------- 155
I+P I + G AP SR
Sbjct: 122 ANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEM 181
Query: 156 IRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
I ++ D+W++G + E + G P F
Sbjct: 182 IEGRMHDEKVDLWSLGVLCYEFLVGMPPF 210
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMI---NIQNEPEGVPSYLIA-GVSLLKEL 97
+Y++ E++G G F V KC TGK+ A K I + + GV I V++L+E+
Sbjct: 6 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREI 65
Query: 98 EHDNIVRLLDVLTTGRYVYLVFE 120
H NI+ L D+ V L+ E
Sbjct: 66 RHPNIITLHDIFENKTDVVLILE 88
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 59/112 (52%), Gaps = 11/112 (9%)
Query: 31 GSEQME--KVKDWNYKVVEKIGQGVFGEVYKC----LNLETGKKVAIKMINIQNEPEGVP 84
GSE + + ++ + K ++++G+G FG V C L TG+ VA+K +Q+ E
Sbjct: 1 GSEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK--KLQHSTEEHL 58
Query: 85 SYLIAGVSLLKELEHDNIVRLLDVLTTG--RYVYLVFEYLDL-DLGSFIRKH 133
+ +LK L+HDNIV+ V + R + L+ EYL L +++KH
Sbjct: 59 RDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH 110
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
Query: 44 KVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIV 103
K+V+++G G FGEV+ KVA+K ++ V ++L +L+K L+HD +V
Sbjct: 16 KLVKRLGAGQFGEVWMGY-YNNSTKVAVK--TLKPGTMSVQAFL-EEANLMKTLQHDKLV 71
Query: 104 RLLDVLTTGRYVYLVFEYL 122
RL V+T +Y++ EY+
Sbjct: 72 RLYAVVTREEPIYIITEYM 90
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y+V E IG G + +C++ T + A+K+I+ P+ I LL+ +H NI
Sbjct: 24 YEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRD---PTEEIE--ILLRYGQHPNI 78
Query: 103 VRLLDVLTTGRYVYLVFE 120
+ L DV G+YVY+V E
Sbjct: 79 ITLKDVYDDGKYVYVVTE 96
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMI---NIQNEPEGVPSYLIA-GVSLLKEL 97
+Y++ E++G G F V KC TGK+ A K I + + GV I V++L+E+
Sbjct: 27 HYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREI 86
Query: 98 EHDNIVRLLDVLTTGRYVYLVFE 120
H NI+ L D+ V L+ E
Sbjct: 87 RHPNIITLHDIFENKTDVVLILE 109
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 42 NYKVVEKIGQGVFGEVYKC-LNLETGKK--VAIKMINIQNEPEGVPSYLIAGVSLLKELE 98
N + + +G G FGEV L L + K+ VAIK + + + +L S++ + +
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFL-GEASIMGQFD 104
Query: 99 HDNIVRLLDVLTTGRYVYLVFEYLD-LDLGSFIRKH 133
H NI+RL V+T + V +V E ++ L SF+RKH
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKH 140
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 79/204 (38%), Gaps = 66/204 (32%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN--IQNEPEGVPSYLIAGVSLLKELEHD 100
Y+ ++ IG G G V + G VA+K ++ QN+ +Y + LLK + H
Sbjct: 26 YQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAY--RELVLLKCVNHK 83
Query: 101 NIVRLLDVLTTGRY------VYLVFEYLDLDLG------------SFIRKHTITSIRPHI 142
NI+ LL+V T + VYLV E +D +L S++ + I+ H+
Sbjct: 84 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIK-HL 142
Query: 143 KEVG------------------------------------SPY------KAPESRIRSSV 160
G +PY +APE I
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEV-ILGMG 201
Query: 161 YSTPHDVWAVGCIFAEMVSGKPLF 184
Y+ D+W+VGCI E+V G +F
Sbjct: 202 YAANVDIWSVGCIMGELVKGCVIF 225
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 34 QMEKVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN---IQNEPEGVPSYLIA- 89
+ E V D+ Y E++G G F V KC TG + A K I ++ GV I
Sbjct: 5 RQENVDDY-YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 90 GVSLLKELEHDNIVRLLDVLTTGRYVYLVFE 120
VS+LKE++H N++ L +V V L+ E
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILE 94
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 42 NYKVVEKIGQGVFGEVYKC-LNLETGKK--VAIKMINIQNEPEGVPSYLIAGVSLLKELE 98
N + + +G G FGEV L L + K+ VAIK + + + +L S++ + +
Sbjct: 17 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFL-GEASIMGQFD 75
Query: 99 HDNIVRLLDVLTTGRYVYLVFEYLD-LDLGSFIRKH 133
H NI+RL V+T + V +V E ++ L SF+RKH
Sbjct: 76 HPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKH 111
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y+V E IG G + +C++ T + A+K+I+ P+ I LL+ +H NI
Sbjct: 24 YEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD---PTEEIE--ILLRYGQHPNI 78
Query: 103 VRLLDVLTTGRYVYLVFEYL 122
+ L DV G+YVY+V E +
Sbjct: 79 ITLKDVYDDGKYVYVVTELM 98
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 34 QMEKVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN---IQNEPEGVPSYLIA- 89
+ E V D+ Y E++G G F V KC TG + A K I ++ GV I
Sbjct: 5 RQENVDDY-YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 90 GVSLLKELEHDNIVRLLDVLTTGRYVYLVFE 120
VS+LKE++H N++ L +V V L+ E
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILE 94
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 52/96 (54%), Gaps = 5/96 (5%)
Query: 42 NYKVVEKIGQGVFGEVYKC-LNLETGKK--VAIKMINIQNEPEGVPSYLIAGVSLLKELE 98
N + + +G G FGEV L L + K+ VAIK + + + +L S++ + +
Sbjct: 46 NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFL-GEASIMGQFD 104
Query: 99 HDNIVRLLDVLTTGRYVYLVFEYLD-LDLGSFIRKH 133
H NI+RL V+T + V +V E ++ L SF+RKH
Sbjct: 105 HPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKH 140
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 9/97 (9%)
Query: 44 KVVEKIGQGVFGEVYKC----LNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEH 99
K ++++G+G FG V C L TG+ VA+K +Q+ E + +LK L+H
Sbjct: 12 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK--KLQHSTEEHLRDFEREIEILKSLQH 69
Query: 100 DNIVRLLDVLTTG--RYVYLVFEYLDL-DLGSFIRKH 133
DNIV+ V + R + L+ EYL L +++KH
Sbjct: 70 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH 106
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 78/204 (38%), Gaps = 66/204 (32%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN--IQNEPEGVPSYLIAGVSLLKELEHD 100
Y+ ++ IG G G V + G VA+K ++ QN+ +Y + LLK + H
Sbjct: 24 YQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAY--RELVLLKCVNHK 81
Query: 101 NIVRLLDVLTTGRY------VYLVFEYLDLDLG------------SFIRKHTITSIRPHI 142
NI+ LL+V T + VYLV E +D +L S++ + I+ H+
Sbjct: 82 NIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIK-HL 140
Query: 143 KEVG------------------------------------SPY------KAPESRIRSSV 160
G +PY +APE I
Sbjct: 141 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPYVVTRYYRAPEV-ILGMG 199
Query: 161 YSTPHDVWAVGCIFAEMVSGKPLF 184
Y D+W+VGCI E+V G +F
Sbjct: 200 YKENVDIWSVGCIMGELVKGSVIF 223
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
Query: 44 KVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIV 103
K+V+K+G G FGEV+ KVA+K ++ V ++L +L+K L+HD +V
Sbjct: 15 KLVKKLGAGQFGEVWMGY-YNNSTKVAVK--TLKPGTMSVQAFL-EEANLMKTLQHDKLV 70
Query: 104 RLLDVLTTGRYVYLVFEYL 122
RL V+T +Y++ E++
Sbjct: 71 RLYAVVTKEEPIYIITEFM 89
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 9/97 (9%)
Query: 44 KVVEKIGQGVFGEVYKC----LNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEH 99
K ++++G+G FG V C L TG+ VA+K +Q+ E + +LK L+H
Sbjct: 13 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK--KLQHSTEEHLRDFEREIEILKSLQH 70
Query: 100 DNIVRLLDVLTTG--RYVYLVFEYLDL-DLGSFIRKH 133
DNIV+ V + R + L+ EYL L +++KH
Sbjct: 71 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH 107
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 9/97 (9%)
Query: 44 KVVEKIGQGVFGEVYKC----LNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEH 99
K ++++G+G FG V C L TG+ VA+K +Q+ E + +LK L+H
Sbjct: 11 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK--KLQHSTEEHLRDFEREIEILKSLQH 68
Query: 100 DNIVRLLDVLTTG--RYVYLVFEYLDL-DLGSFIRKH 133
DNIV+ V + R + L+ EYL L +++KH
Sbjct: 69 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH 105
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Query: 33 EQMEKVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVS 92
+Q E +K ++ E +G G F EV TGK A+K I + +G S + ++
Sbjct: 15 KQAEDIKKI-FEFKETLGTGAFSEVVLAEEKATGKLFAVKCIP-KKALKGKESSIENEIA 72
Query: 93 LLKELEHDNIVRLLDVLTTGRYVYLVFE 120
+L++++H+NIV L D+ + ++YLV +
Sbjct: 73 VLRKIKHENIVALEDIYESPNHLYLVMQ 100
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 9/97 (9%)
Query: 44 KVVEKIGQGVFGEVYKC----LNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEH 99
K ++++G+G FG V C L TG+ VA+K +Q+ E + +LK L+H
Sbjct: 13 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK--KLQHSTEEHLRDFEREIEILKSLQH 70
Query: 100 DNIVRLLDVLTTG--RYVYLVFEYLDL-DLGSFIRKH 133
DNIV+ V + R + L+ EYL L +++KH
Sbjct: 71 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH 107
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 9/97 (9%)
Query: 44 KVVEKIGQGVFGEVYKC----LNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEH 99
K ++++G+G FG V C L TG+ VA+K +Q+ E + +LK L+H
Sbjct: 17 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK--KLQHSTEEHLRDFEREIEILKSLQH 74
Query: 100 DNIVRLLDVLTTG--RYVYLVFEYLDL-DLGSFIRKH 133
DNIV+ V + R + L+ EYL L +++KH
Sbjct: 75 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH 111
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 9/97 (9%)
Query: 44 KVVEKIGQGVFGEVYKC----LNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEH 99
K ++++G+G FG V C L TG+ VA+K +Q+ E + +LK L+H
Sbjct: 44 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK--KLQHSTEEHLRDFEREIEILKSLQH 101
Query: 100 DNIVRLLDVLTTG--RYVYLVFEYLDL-DLGSFIRKH 133
DNIV+ V + R + L+ EYL L +++KH
Sbjct: 102 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH 138
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 9/97 (9%)
Query: 44 KVVEKIGQGVFGEVYKC----LNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEH 99
K ++++G+G FG V C L TG+ VA+K +Q+ E + +LK L+H
Sbjct: 13 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK--KLQHSTEEHLRDFEREIEILKSLQH 70
Query: 100 DNIVRLLDVLTTG--RYVYLVFEYLDL-DLGSFIRKH 133
DNIV+ V + R + L+ EYL L +++KH
Sbjct: 71 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH 107
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 9/97 (9%)
Query: 44 KVVEKIGQGVFGEVYKC----LNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEH 99
K ++++G+G FG V C L TG+ VA+K +Q+ E + +LK L+H
Sbjct: 18 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK--KLQHSTEEHLRDFEREIEILKSLQH 75
Query: 100 DNIVRLLDVLTTG--RYVYLVFEYLDL-DLGSFIRKH 133
DNIV+ V + R + L+ EYL L +++KH
Sbjct: 76 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH 112
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 9/97 (9%)
Query: 44 KVVEKIGQGVFGEVYKC----LNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEH 99
K ++++G+G FG V C L TG+ VA+K +Q+ E + +LK L+H
Sbjct: 19 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK--KLQHSTEEHLRDFEREIEILKSLQH 76
Query: 100 DNIVRLLDVLTTG--RYVYLVFEYLDL-DLGSFIRKH 133
DNIV+ V + R + L+ EYL L +++KH
Sbjct: 77 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH 113
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 9/97 (9%)
Query: 44 KVVEKIGQGVFGEVYKC----LNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEH 99
K ++++G+G FG V C L TG+ VA+K +Q+ E + +LK L+H
Sbjct: 20 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK--KLQHSTEEHLRDFEREIEILKSLQH 77
Query: 100 DNIVRLLDVLTTG--RYVYLVFEYLDL-DLGSFIRKH 133
DNIV+ V + R + L+ EYL L +++KH
Sbjct: 78 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH 114
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 49/89 (55%), Gaps = 8/89 (8%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINI-------QNEPEGVPSYLIAGVSLL 94
NY+ E +G+GV V +C++ T K+ A+K+I++ E + + + V +L
Sbjct: 18 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 77
Query: 95 KELE-HDNIVRLLDVLTTGRYVYLVFEYL 122
+++ H NI++L D T + +LVF+ +
Sbjct: 78 RKVSGHPNIIQLKDTYETNTFFFLVFDLM 106
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 34 QMEKVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN---IQNEPEGVPSYLIA- 89
+ E V D+ Y E++G G F V KC TG + A K I ++ GV I
Sbjct: 4 RQENVDDY-YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 62
Query: 90 GVSLLKELEHDNIVRLLDVLTTGRYVYLVFE 120
VS+LKE++H N++ L +V V L+ E
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILE 93
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 7/81 (8%)
Query: 44 KVVEKIGQGVFGEVYKCLNLETG-KKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
K+VE++G G GEV+ + G KVA+K + + P +A +L+K+L+H +
Sbjct: 16 KLVERLGAGQAGEVW--MGYYNGHTKVAVKSLK---QGSMSPDAFLAEANLMKQLQHQRL 70
Query: 103 VRLLDVLTTGRYVYLVFEYLD 123
VRL V+T +Y++ EY++
Sbjct: 71 VRLYAVVTQ-EPIYIITEYME 90
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 34 QMEKVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN---IQNEPEGVPSYLIA- 89
+ E V D+ Y E++G G F V KC TG + A K I ++ GV I
Sbjct: 5 RQENVDDY-YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 90 GVSLLKELEHDNIVRLLDVLTTGRYVYLVFE 120
VS+LKE++H N++ L +V V L+ E
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILE 94
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 34 QMEKVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN---IQNEPEGVPSYLIA- 89
+ E V D+ Y E++G G F V KC TG + A K I ++ GV I
Sbjct: 4 RQENVDDY-YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 62
Query: 90 GVSLLKELEHDNIVRLLDVLTTGRYVYLVFE 120
VS+LKE++H N++ L +V V L+ E
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILE 93
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 49/89 (55%), Gaps = 8/89 (8%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINI-------QNEPEGVPSYLIAGVSLL 94
NY+ E +G+GV V +C++ T K+ A+K+I++ E + + + V +L
Sbjct: 18 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 77
Query: 95 KELE-HDNIVRLLDVLTTGRYVYLVFEYL 122
+++ H NI++L D T + +LVF+ +
Sbjct: 78 RKVSGHPNIIQLKDTYETNTFFFLVFDLM 106
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 34 QMEKVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN---IQNEPEGVPSYLIA- 89
+ E V D+ Y E++G G F V KC TG + A K I ++ GV I
Sbjct: 5 RQENVDDY-YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 90 GVSLLKELEHDNIVRLLDVLTTGRYVYLVFE 120
VS+LKE++H N++ L +V V L+ E
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILE 94
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 34 QMEKVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN---IQNEPEGVPSYLIA- 89
+ E V D+ Y E++G G F V KC TG + A K I ++ GV I
Sbjct: 5 RQENVDDY-YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 90 GVSLLKELEHDNIVRLLDVLTTGRYVYLVFE 120
VS+LKE++H N++ L +V V L+ E
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILE 94
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 34 QMEKVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN---IQNEPEGVPSYLIA- 89
+ E V D+ Y E++G G F V KC TG + A K I ++ GV I
Sbjct: 5 RQENVDDY-YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 90 GVSLLKELEHDNIVRLLDVLTTGRYVYLVFE 120
VS+LKE++H N++ L +V V L+ E
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILE 94
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 34 QMEKVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN---IQNEPEGVPSYLIA- 89
+ E V D+ Y E++G G F V KC TG + A K I ++ GV I
Sbjct: 5 RQENVDDY-YDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 90 GVSLLKELEHDNIVRLLDVLTTGRYVYLVFE 120
VS+LKE++H N++ L +V V L+ E
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILE 94
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 48 KIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLI-AGVSLLKELEHDNIVRLL 106
K+G G FG+V+ +G + IK IN + VP I A + +LK L+H NI+++
Sbjct: 29 KLGSGAFGDVHLVEERSSGLERVIKTIN--KDRSQVPMEQIEAEIEVLKSLDHPNIIKIF 86
Query: 107 DVLTTGRYVYLVFE 120
+V +Y+V E
Sbjct: 87 EVFEDYHNMYIVME 100
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 34 QMEKVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN---IQNEPEGVPSYLIA- 89
+ E V D+ Y E++G G F V KC TG + A K I ++ GV I
Sbjct: 5 RQENVDDY-YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 90 GVSLLKELEHDNIVRLLDVLTTGRYVYLVFE 120
VS+LKE++H N++ L +V V L+ E
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILE 94
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 34 QMEKVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN---IQNEPEGVPSYLIA- 89
+ E V D+ Y E++G G F V KC TG + A K I ++ GV I
Sbjct: 5 RQENVDDY-YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 90 GVSLLKELEHDNIVRLLDVLTTGRYVYLVFE 120
VS+LKE++H N++ L +V V L+ E
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILE 94
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 58/113 (51%), Gaps = 14/113 (12%)
Query: 48 KIGQGVFGEVYK-----CLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
++GQG FG VY+ + E +VAIK +N +L S++KE ++
Sbjct: 25 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA-SVMKEFNCHHV 83
Query: 103 VRLLDVLTTGRYVYLVFEYLDL-DLGSFIRKHTITSIRPHIKEVGSPYKAPES 154
VRLL V++ G+ ++ E + DL S++R S+RP ++ +P AP S
Sbjct: 84 VRLLGVVSQGQPTLVIMELMTRGDLKSYLR-----SLRPEME--NNPVLAPPS 129
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 34 QMEKVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN---IQNEPEGVPSYLIA- 89
+ E V D+ Y E++G G F V KC TG + A K I ++ GV I
Sbjct: 5 RQENVDDY-YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 90 GVSLLKELEHDNIVRLLDVLTTGRYVYLVFE 120
VS+LKE++H N++ L +V V L+ E
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILE 94
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 58/113 (51%), Gaps = 14/113 (12%)
Query: 48 KIGQGVFGEVYK-----CLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
++GQG FG VY+ + E +VAIK +N +L S++KE ++
Sbjct: 17 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA-SVMKEFNCHHV 75
Query: 103 VRLLDVLTTGRYVYLVFEYLDL-DLGSFIRKHTITSIRPHIKEVGSPYKAPES 154
VRLL V++ G+ ++ E + DL S++R S+RP ++ +P AP S
Sbjct: 76 VRLLGVVSQGQPTLVIMELMTRGDLKSYLR-----SLRPEME--NNPVLAPPS 121
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 44 KVVEKIGQGVFGEVYKCLNLETGKK---VAIKMINIQNEPEGVPSYLIAGVSLLKELEHD 100
K+ E IG G FGEV + GKK VAIK + E ++ S++ + EH
Sbjct: 19 KIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLK-GGYTERQRREFLSEASIMGQFEHP 77
Query: 101 NIVRLLDVLTTGRYVYLVFEYLDLD-LGSFIR 131
NI+RL V+T V ++ E+++ L SF+R
Sbjct: 78 NIIRLEGVVTNSMPVMILTEFMENGALDSFLR 109
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 49/89 (55%), Gaps = 8/89 (8%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINI-------QNEPEGVPSYLIAGVSLL 94
NY+ E +G+GV V +C++ T K+ A+K+I++ E + + + V +L
Sbjct: 5 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 64
Query: 95 KELE-HDNIVRLLDVLTTGRYVYLVFEYL 122
+++ H NI++L D T + +LVF+ +
Sbjct: 65 RKVSGHPNIIQLKDTYETNTFFFLVFDLM 93
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 50/91 (54%), Gaps = 9/91 (9%)
Query: 37 KVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAG-----V 91
+VK +Y + + +G G FG+V + TG KVA+K++N Q + S + G +
Sbjct: 12 RVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQK----IRSLDVVGKIRREI 67
Query: 92 SLLKELEHDNIVRLLDVLTTGRYVYLVFEYL 122
LK H +I++L V++T +++V EY+
Sbjct: 68 QNLKLFRHPHIIKLYQVISTPSDIFMVMEYV 98
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 81/193 (41%), Gaps = 58/193 (30%)
Query: 46 VEKIGQGVFGEVYKCLNLETGKKVAIKMINI----------QNEP--------------- 80
+E+IG+G FGEV+K ++ T + VAIK+I++ Q E
Sbjct: 28 LERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVTKYY 87
Query: 81 ----EGVPSYLI-------AGVSLLKELEHD---------NIVRLLDVLTTGRYVY---- 116
+G ++I + + LL+ D I++ LD L + + ++
Sbjct: 88 GSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIK 147
Query: 117 ----LVFEYLDLDLGSFIRKHTITSIRPHIKE---VGSPYKAPESRIRSSVYSTPHDVWA 169
L+ E D+ L F +T + IK VG+P+ I+ S Y + D+W+
Sbjct: 148 AANVLLSEQGDVKLADFGVAGQLTDTQ--IKRNTFVGTPFWMAPEVIQQSAYDSKADIWS 205
Query: 170 VGCIFAEMVSGKP 182
+G E+ G+P
Sbjct: 206 LGITAIELAKGEP 218
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 58/113 (51%), Gaps = 14/113 (12%)
Query: 48 KIGQGVFGEVYK-----CLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
++GQG FG VY+ + E +VAIK +N +L S++KE ++
Sbjct: 26 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA-SVMKEFNCHHV 84
Query: 103 VRLLDVLTTGRYVYLVFEYLDL-DLGSFIRKHTITSIRPHIKEVGSPYKAPES 154
VRLL V++ G+ ++ E + DL S++R S+RP ++ +P AP S
Sbjct: 85 VRLLGVVSQGQPTLVIMELMTRGDLKSYLR-----SLRPEME--NNPVLAPPS 130
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 58/113 (51%), Gaps = 14/113 (12%)
Query: 48 KIGQGVFGEVYK-----CLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
++GQG FG VY+ + E +VAIK +N +L S++KE ++
Sbjct: 23 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA-SVMKEFNCHHV 81
Query: 103 VRLLDVLTTGRYVYLVFEYLDL-DLGSFIRKHTITSIRPHIKEVGSPYKAPES 154
VRLL V++ G+ ++ E + DL S++R S+RP ++ +P AP S
Sbjct: 82 VRLLGVVSQGQPTLVIMELMTRGDLKSYLR-----SLRPEME--NNPVLAPPS 127
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 58/113 (51%), Gaps = 14/113 (12%)
Query: 48 KIGQGVFGEVYK-----CLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
++GQG FG VY+ + E +VAIK +N +L S++KE ++
Sbjct: 25 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA-SVMKEFNCHHV 83
Query: 103 VRLLDVLTTGRYVYLVFEYLDL-DLGSFIRKHTITSIRPHIKEVGSPYKAPES 154
VRLL V++ G+ ++ E + DL S++R S+RP ++ +P AP S
Sbjct: 84 VRLLGVVSQGQPTLVIMELMTRGDLKSYLR-----SLRPEME--NNPVLAPPS 129
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 58/113 (51%), Gaps = 14/113 (12%)
Query: 48 KIGQGVFGEVYK-----CLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
++GQG FG VY+ + E +VAIK +N +L S++KE ++
Sbjct: 32 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA-SVMKEFNCHHV 90
Query: 103 VRLLDVLTTGRYVYLVFEYLDL-DLGSFIRKHTITSIRPHIKEVGSPYKAPES 154
VRLL V++ G+ ++ E + DL S++R S+RP ++ +P AP S
Sbjct: 91 VRLLGVVSQGQPTLVIMELMTRGDLKSYLR-----SLRPEME--NNPVLAPPS 136
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 7/80 (8%)
Query: 44 KVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIV 103
K+++ IG+G FG+V L G KVA+K I + + +A S++ +L H N+V
Sbjct: 196 KLLQTIGKGEFGDVM--LGDYRGNKVAVKCI----KNDATAQAFLAEASVMTQLRHSNLV 249
Query: 104 RLLDVLTTGR-YVYLVFEYL 122
+LL V+ + +Y+V EY+
Sbjct: 250 QLLGVIVEEKGGLYIVTEYM 269
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 7/80 (8%)
Query: 44 KVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIV 103
K+++ IG+G FG+V L G KVA+K I + + +A S++ +L H N+V
Sbjct: 9 KLLQTIGKGEFGDVM--LGDYRGNKVAVKCI----KNDATAQAFLAEASVMTQLRHSNLV 62
Query: 104 RLLDVLTTGR-YVYLVFEYL 122
+LL V+ + +Y+V EY+
Sbjct: 63 QLLGVIVEEKGGLYIVTEYM 82
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 58/113 (51%), Gaps = 14/113 (12%)
Query: 48 KIGQGVFGEVYK-----CLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
++GQG FG VY+ + E +VAIK +N +L S++KE ++
Sbjct: 19 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA-SVMKEFNCHHV 77
Query: 103 VRLLDVLTTGRYVYLVFEYLDL-DLGSFIRKHTITSIRPHIKEVGSPYKAPES 154
VRLL V++ G+ ++ E + DL S++R S+RP ++ +P AP S
Sbjct: 78 VRLLGVVSQGQPTLVIMELMTRGDLKSYLR-----SLRPEME--NNPVLAPPS 123
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 7/80 (8%)
Query: 44 KVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIV 103
K+++ IG+G FG+V L G KVA+K I + + +A S++ +L H N+V
Sbjct: 15 KLLQTIGKGEFGDVM--LGDYRGNKVAVKCI----KNDATAQAFLAEASVMTQLRHSNLV 68
Query: 104 RLLDVLTTGR-YVYLVFEYL 122
+LL V+ + +Y+V EY+
Sbjct: 69 QLLGVIVEEKGGLYIVTEYM 88
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 58/113 (51%), Gaps = 14/113 (12%)
Query: 48 KIGQGVFGEVYK-----CLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
++GQG FG VY+ + E +VAIK +N +L S++KE ++
Sbjct: 54 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA-SVMKEFNCHHV 112
Query: 103 VRLLDVLTTGRYVYLVFEYLDL-DLGSFIRKHTITSIRPHIKEVGSPYKAPES 154
VRLL V++ G+ ++ E + DL S++R S+RP ++ +P AP S
Sbjct: 113 VRLLGVVSQGQPTLVIMELMTRGDLKSYLR-----SLRPEME--NNPVLAPPS 158
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 58/113 (51%), Gaps = 14/113 (12%)
Query: 48 KIGQGVFGEVYK-----CLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
++GQG FG VY+ + E +VAIK +N +L S++KE ++
Sbjct: 19 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA-SVMKEFNCHHV 77
Query: 103 VRLLDVLTTGRYVYLVFEYLDL-DLGSFIRKHTITSIRPHIKEVGSPYKAPES 154
VRLL V++ G+ ++ E + DL S++R S+RP ++ +P AP S
Sbjct: 78 VRLLGVVSQGQPTLVIMELMTRGDLKSYLR-----SLRPEME--NNPVLAPPS 123
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 58/113 (51%), Gaps = 14/113 (12%)
Query: 48 KIGQGVFGEVYK-----CLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
++GQG FG VY+ + E +VAIK +N +L S++KE ++
Sbjct: 26 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA-SVMKEFNCHHV 84
Query: 103 VRLLDVLTTGRYVYLVFEYLDL-DLGSFIRKHTITSIRPHIKEVGSPYKAPES 154
VRLL V++ G+ ++ E + DL S++R S+RP ++ +P AP S
Sbjct: 85 VRLLGVVSQGQPTLVIMELMTRGDLKSYLR-----SLRPEME--NNPVLAPPS 130
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 7/80 (8%)
Query: 44 KVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIV 103
K+++ IG+G FG+V L G KVA+K I + + +A S++ +L H N+V
Sbjct: 24 KLLQTIGKGEFGDVM--LGDYRGNKVAVKCI----KNDATAQAFLAEASVMTQLRHSNLV 77
Query: 104 RLLDVLTTGR-YVYLVFEYL 122
+LL V+ + +Y+V EY+
Sbjct: 78 QLLGVIVEEKGGLYIVTEYM 97
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 59/120 (49%), Gaps = 12/120 (10%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGK-----KVAIKMINIQNEPEGVPSYLIAGVSLLKE 96
N + + +G G FG+V + GK KVA+KM+ + + L++ + ++
Sbjct: 32 NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEA-LMSELKIMSH 90
Query: 97 L-EHDNIVRLLDVLTTGRYVYLVFEYLDL-DLGSFIRKHTITSIRPHIKEVGSPYKAPES 154
L +H+NIV LL T G V ++ EY DL +F+R+ + P + +P + PE
Sbjct: 91 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSL----APGQDPEG 146
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 84/207 (40%), Gaps = 54/207 (26%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKM------------INIQNEPEGVPSYLIA 89
+Y++V K+G+G + EV++ +N+ +KV +K+ I I G P+ +I
Sbjct: 38 DYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKNKIKREIKILENLRGGPN-IIT 96
Query: 90 GVSLLKE---------LEHDN---IVRLLDVLTTGR---YVYLVFEYLDL--DLGSF--- 129
++K+ EH N +L LT Y+Y + + LD +G
Sbjct: 97 LADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMGIMHRD 156
Query: 130 IRKHTITSIRPHIK--------------------EVGSPY-KAPESRIRSSVYSTPHDVW 168
++ H + H K V S Y K PE + +Y D+W
Sbjct: 157 VKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMW 216
Query: 169 AVGCIFAEMVSGKPLFPCGKKDHLSLI 195
++GC+ A M+ K F G ++ L+
Sbjct: 217 SLGCMLASMIFRKEPFFHGHDNYDQLV 243
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Query: 48 KIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRLLD 107
KIG+G G V TGK+VA+K ++++ + L V ++++ HDN+V +
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRR--ELLFNEVVIMRDYHHDNVVDMYS 109
Query: 108 VLTTGRYVYLVFEYLDLDLGSFIRKHT 134
G +++V E+L+ + I HT
Sbjct: 110 SYLVGDELWVVMEFLEGGALTDIVTHT 136
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 145 VGSPYKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
VG+PY I Y T D+W++G + EM+ G+P +
Sbjct: 202 VGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPY 241
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 40.0 bits (92), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 54/94 (57%), Gaps = 9/94 (9%)
Query: 36 EKVKDWNYKVVEKIGQGVFGEVY---KCLNLETGKKVAIKMIN----IQNEPEGVPSYLI 88
EK++ ++++ +G+G +G+V+ K TGK A+K++ ++N + ++
Sbjct: 12 EKIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKD--TAHTK 69
Query: 89 AGVSLLKELEHDNIVRLLDVLTTGRYVYLVFEYL 122
A ++L+E++H IV L+ TG +YL+ EYL
Sbjct: 70 AERNILEEVKHPFIVDLIYAFQTGGKLYLILEYL 103
Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
Y APE +RS ++ D W++G + +M++G P F
Sbjct: 187 YMAPEILMRSG-HNRAVDWWSLGALMYDMLTGAPPF 221
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 54/94 (57%), Gaps = 9/94 (9%)
Query: 36 EKVKDWNYKVVEKIGQGVFGEVY---KCLNLETGKKVAIKMIN----IQNEPEGVPSYLI 88
EK++ ++++ +G+G +G+V+ K TGK A+K++ ++N + ++
Sbjct: 12 EKIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKD--TAHTK 69
Query: 89 AGVSLLKELEHDNIVRLLDVLTTGRYVYLVFEYL 122
A ++L+E++H IV L+ TG +YL+ EYL
Sbjct: 70 AERNILEEVKHPFIVDLIYAFQTGGKLYLILEYL 103
Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
Y APE +RS ++ D W++G + +M++G P F
Sbjct: 187 YMAPEILMRSG-HNRAVDWWSLGALMYDMLTGAPPF 221
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 81/213 (38%), Gaps = 68/213 (31%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN--IQNEPEGVPSYLIAGVSLLKELEHD 100
Y+ ++ IG G G V + + VAIK ++ QN+ +Y + L+K + H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY--RELVLMKVVNHK 83
Query: 101 NIVRLLDVLTTGRY------VYLVFEY------------LDLDLGSFIRKHTITSIRPHI 142
NI+ LL+V T + VY+V E LD + S++ + I+ H+
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIK-HL 142
Query: 143 KEVG------------------------------------SPY------KAPESRIRSSV 160
G +PY +APE I
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV-ILGMG 201
Query: 161 YSTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLS 193
Y D+W+VGCI EM+ G LFP DH+
Sbjct: 202 YKENVDIWSVGCIMGEMIKGGVLFPG--TDHID 232
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 14/113 (12%)
Query: 48 KIGQGVFGEVYK-----CLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
++GQG FG VY+ + E +VAIK +N +L S++KE ++
Sbjct: 22 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA-SVMKEFNCHHV 80
Query: 103 VRLLDVLTTGRYVYLVFEYLDL-DLGSFIRKHTITSIRPHIKEVGSPYKAPES 154
VRLL V++ G+ ++ E + DL S++R S+RP + +P AP S
Sbjct: 81 VRLLGVVSQGQPTLVIMELMTRGDLKSYLR-----SLRPAM--ANNPVLAPPS 126
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 5/91 (5%)
Query: 33 EQMEKVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVS 92
+ MEK Y ++KIG+G FG+ + E G++ IK INI V+
Sbjct: 21 QSMEK-----YVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVA 75
Query: 93 LLKELEHDNIVRLLDVLTTGRYVYLVFEYLD 123
+L ++H NIV+ + +Y+V +Y +
Sbjct: 76 VLANMKHPNIVQYRESFEENGSLYIVMDYCE 106
Score = 34.7 bits (78), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 26/52 (50%)
Query: 145 VGSPYKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIV 196
+G+PY + Y+ D+WA+GC+ E+ + K F G +L L +
Sbjct: 186 IGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKI 237
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 34 QMEKVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN---IQNEPEGVPSYLIA- 89
+ E V D+ Y E++G G F V KC TG + A K I ++ GV I
Sbjct: 5 RQENVDDY-YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 90 GVSLLKELEHDNIVRLLDVLTTGRYVYLVFE 120
VS+LKE++H N++ L +V V L+ E
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILIGE 94
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 84/212 (39%), Gaps = 66/212 (31%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN--IQNEPEGVPSYLIAGVSLLKELEHD 100
Y+ ++ IG G G V + + VAIK ++ QN+ +Y + L+K + H
Sbjct: 26 YQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAY--RELVLMKVVNHK 83
Query: 101 NIVRLLDVLTTGRY------VYLVFEYLDLDLGSFIR-------------------KHTI 135
NI+ LL+V T + VY+V E +D +L I+ KH
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLH 143
Query: 136 TS------IRP-----------HIKEVG-----------SPY------KAPESRIRSSVY 161
++ ++P I + G +PY +APE I Y
Sbjct: 144 SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV-ILGMGY 202
Query: 162 STPHDVWAVGCIFAEMVSGKPLFPCGKKDHLS 193
D+W+VG I EM+ G LFP DH+
Sbjct: 203 KENVDIWSVGVIMGEMIKGGVLFPG--TDHID 232
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMI-NIQNEPEGVPSYLIAGVSLLKELEHD 100
++ + +G+G FG VY + +A+K++ Q E EGV L + + L H
Sbjct: 15 DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHP 74
Query: 101 NIVRLLDVLTTGRYVYLVFEY 121
NI+R+ + + +YL+ E+
Sbjct: 75 NILRMYNYFHDRKRIYLMLEF 95
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 57/113 (50%), Gaps = 14/113 (12%)
Query: 48 KIGQGVFGEVYK-----CLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
++GQG FG VY+ + E +VAIK +N +L S++KE ++
Sbjct: 32 ELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEA-SVMKEFNCHHV 90
Query: 103 VRLLDVLTTGRYVYLVFEYLDL-DLGSFIRKHTITSIRPHIKEVGSPYKAPES 154
VRLL V++ G+ ++ E + DL S++R S+RP + +P AP S
Sbjct: 91 VRLLGVVSQGQPTLVIMELMTRGDLKSYLR-----SLRPAM--ANNPVLAPPS 136
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMI-NIQNEPEGVPSYLIAGVSLLKELEHD 100
++ + +G+G FG VY + +A+K++ Q E EGV L + + L H
Sbjct: 16 DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHP 75
Query: 101 NIVRLLDVLTTGRYVYLVFEY 121
NI+R+ + + +YL+ E+
Sbjct: 76 NILRMYNYFHDRKRIYLMLEF 96
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Query: 44 KVVEKIGQGVFGEVYKC----LNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEH 99
K ++++G+G FG V C L TG+ VA+K +Q+ E + +LK L+H
Sbjct: 16 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVK--KLQHSTEEHLRDFEREIEILKSLQH 73
Query: 100 DNIVRLLDVLTTG--RYVYLVFEYL 122
DNIV+ V + R + L+ EYL
Sbjct: 74 DNIVKYKGVCYSAGRRNLKLIMEYL 98
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 86/230 (37%), Gaps = 72/230 (31%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN--IQNEPEGVPSYLIAGVSLLKELEHD 100
Y+ ++ IG G G V + + VAIK ++ QN+ +Y + L+K + H
Sbjct: 27 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY--RELVLMKCVNHK 84
Query: 101 NIVRLLDVLTTGRY------VYLVFEY------------LDLDLGSFIRKHTITSIRPHI 142
NI+ LL+V T + VY+V E LD + S++ + I+ H+
Sbjct: 85 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK-HL 143
Query: 143 KEVG------------------------------------SPY------KAPESRIRSSV 160
G +PY +APE I
Sbjct: 144 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV-ILGMG 202
Query: 161 YSTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRYFTALTNYLVLPC 210
Y D+W+VGCI EM+ G LFP DH+ + + L PC
Sbjct: 203 YKENVDIWSVGCIMGEMIKGGVLFP--GTDHID----QWNKVIEQLGTPC 246
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 86/230 (37%), Gaps = 72/230 (31%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN--IQNEPEGVPSYLIAGVSLLKELEHD 100
Y+ ++ IG G G V + + VAIK ++ QN+ +Y + L+K + H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY--RELVLMKCVNHK 83
Query: 101 NIVRLLDVLTTGRY------VYLVFEY------------LDLDLGSFIRKHTITSIRPHI 142
NI+ LL+V T + VY+V E LD + S++ + I+ H+
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK-HL 142
Query: 143 KEVG------------------------------------SP------YKAPESRIRSSV 160
G +P Y+APE I
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVVTRYYRAPEV-ILGMG 201
Query: 161 YSTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRYFTALTNYLVLPC 210
Y D+W+VGCI EM+ G LFP DH+ + + L PC
Sbjct: 202 YKENVDIWSVGCIMGEMIKGGVLFP--GTDHID----QWNKVIEQLGTPC 245
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 50/97 (51%), Gaps = 10/97 (10%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
+++ E++G G FG V + ++ +TG++VAIK + P+ + + + ++K+L H N+
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLE-IQIMKKLNHPNV 74
Query: 103 VRLLDV------LTTGRYVYLVFEYLDLDLGSFIRKH 133
V +V L L EY + G +RK+
Sbjct: 75 VSAREVPDGLQKLAPNDLPLLAMEYCE---GGDLRKY 108
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 86/230 (37%), Gaps = 72/230 (31%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN--IQNEPEGVPSYLIAGVSLLKELEHD 100
Y+ ++ IG G G V + + VAIK ++ QN+ +Y + L+K + H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY--RELVLMKCVNHK 83
Query: 101 NIVRLLDVLTTGRY------VYLVFEY------------LDLDLGSFIRKHTITSIRPHI 142
NI+ LL+V T + VY+V E LD + S++ + I+ H+
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK-HL 142
Query: 143 KEVG------------------------------------SPY------KAPESRIRSSV 160
G +PY +APE I
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV-ILGMG 201
Query: 161 YSTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRYFTALTNYLVLPC 210
Y D+W+VGCI EM+ G LFP DH+ + + L PC
Sbjct: 202 YKENVDIWSVGCIMGEMIKGGVLFP--GTDHID----QWNKVIEQLGTPC 245
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 50/97 (51%), Gaps = 10/97 (10%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
+++ E++G G FG V + ++ +TG++VAIK + P+ + + + ++K+L H N+
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLE-IQIMKKLNHPNV 75
Query: 103 VRLLDV------LTTGRYVYLVFEYLDLDLGSFIRKH 133
V +V L L EY + G +RK+
Sbjct: 76 VSAREVPDGLQKLAPNDLPLLAMEYCE---GGDLRKY 109
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 58/118 (49%), Gaps = 8/118 (6%)
Query: 37 KVKDW---NYKVVEKIGQGVFGEVYKCLNLETGK-KVAIKMINIQNEPEGVPSYLIAGVS 92
++ DW Y++V +G+G FG+V +CL+ GK +VA+K+I + I +
Sbjct: 44 RIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLK 103
Query: 93 LLKELEHDN---IVRLLDVLTTGRYVYLVFEYLDLDLGSFIRKHTITSIR-PHIKEVG 146
+KE + +N V + D ++ + FE L + F++++ PH++ +
Sbjct: 104 KIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMA 161
Score = 33.5 bits (75), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 6/84 (7%)
Query: 125 DLGSFIRKHTITSIRPHIKEVGSPYKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
D GS H H V + + P I ++ P DVW++GCI E G LF
Sbjct: 217 DFGSATFDH-----EHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLF 271
Query: 185 PCGK-KDHLSLIVRYFTALTNYLV 207
+ ++HL ++ + + ++++
Sbjct: 272 QTHENREHLVMMEKILGPIPSHMI 295
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 58/118 (49%), Gaps = 8/118 (6%)
Query: 37 KVKDW---NYKVVEKIGQGVFGEVYKCLNLETGK-KVAIKMINIQNEPEGVPSYLIAGVS 92
++ DW Y++V +G+G FG+V +CL+ GK +VA+K+I + I +
Sbjct: 21 RIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLK 80
Query: 93 LLKELEHDN---IVRLLDVLTTGRYVYLVFEYLDLDLGSFIRKHTITSIR-PHIKEVG 146
+KE + +N V + D ++ + FE L + F++++ PH++ +
Sbjct: 81 KIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMA 138
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 8/86 (9%)
Query: 123 DLDLGSFIRKHTITSIRPHIKEVGSPYKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKP 182
D +F +H T + Y+ PE I ++ P DVW++GCI E G
Sbjct: 194 DFGSATFDHEHHTTIV------ATRHYRPPEV-ILELGWAQPCDVWSIGCILFEYYRGFT 246
Query: 183 LFPCGK-KDHLSLIVRYFTALTNYLV 207
LF + ++HL ++ + + ++++
Sbjct: 247 LFQTHENREHLVMMEKILGPIPSHMI 272
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 57/111 (51%), Gaps = 10/111 (9%)
Query: 46 VEKI-GQGVFGEV-YKCLNLETGKKV--AIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
+EKI G G GEV Y L + + V AIK + +L + S++ + +H N
Sbjct: 53 IEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFL-SEASIMGQFDHPN 111
Query: 102 IVRLLDVLTTGRYVYLVFEYLD-LDLGSFIRKH----TITSIRPHIKEVGS 147
I+RL V+T GR +V EY++ L +F+R H TI + ++ VG+
Sbjct: 112 IIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGA 162
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 58/118 (49%), Gaps = 8/118 (6%)
Query: 37 KVKDW---NYKVVEKIGQGVFGEVYKCLNLETGK-KVAIKMINIQNEPEGVPSYLIAGVS 92
++ DW Y++V +G+G FG+V +CL+ GK +VA+K+I + I +
Sbjct: 12 RIGDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINVLK 71
Query: 93 LLKELEHDN---IVRLLDVLTTGRYVYLVFEYLDLDLGSFIRKHTITSIR-PHIKEVG 146
+KE + +N V + D ++ + FE L + F++++ PH++ +
Sbjct: 72 KIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMA 129
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 6/84 (7%)
Query: 125 DLGSFIRKHTITSIRPHIKEVGSPYKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
D GS H H V + + P I ++ P DVW++GCI E G LF
Sbjct: 185 DFGSATFDH-----EHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLF 239
Query: 185 PCGK-KDHLSLIVRYFTALTNYLV 207
+ ++HL ++ + + ++++
Sbjct: 240 QTHENREHLVMMEKILGPIPSHMI 263
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 78/205 (38%), Gaps = 66/205 (32%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN--IQNEPEGVPSYLIAGVSLLKELEHD 100
Y+ ++ IG G G V + + VAIK ++ QN+ +Y + L+K + H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY--RELVLMKCVNHK 83
Query: 101 NIVRLLDVLTTGRY------VYLVFEY------------LDLDLGSFIRKHTITSIRPHI 142
NI+ LL+V T + VY+V E LD + S++ + I+ H+
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK-HL 142
Query: 143 KEVG------------------------------------SPY------KAPESRIRSSV 160
G +PY +APE I
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV-ILGMG 201
Query: 161 YSTPHDVWAVGCIFAEMVSGKPLFP 185
Y D+W+VGCI EM+ G LFP
Sbjct: 202 YKENVDIWSVGCIMGEMIKGGVLFP 226
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 57/111 (51%), Gaps = 10/111 (9%)
Query: 46 VEKI-GQGVFGEV-YKCLNLETGKKV--AIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
+EKI G G GEV Y L + + V AIK + +L + S++ + +H N
Sbjct: 53 IEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFL-SEASIMGQFDHPN 111
Query: 102 IVRLLDVLTTGRYVYLVFEYLD-LDLGSFIRKH----TITSIRPHIKEVGS 147
I+RL V+T GR +V EY++ L +F+R H TI + ++ VG+
Sbjct: 112 IIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGA 162
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 39.3 bits (90), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 78/205 (38%), Gaps = 66/205 (32%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN--IQNEPEGVPSYLIAGVSLLKELEHD 100
Y+ ++ IG G G V + + VAIK ++ QN+ +Y + L+K + H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY--RELVLMKCVNHK 83
Query: 101 NIVRLLDVLTTGRY------VYLVFEY------------LDLDLGSFIRKHTITSIRPHI 142
NI+ LL+V T + VY+V E LD + S++ + I+ H+
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIK-HL 142
Query: 143 KEVG------------------------------------SPY------KAPESRIRSSV 160
G +PY +APE I
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV-ILGMG 201
Query: 161 YSTPHDVWAVGCIFAEMVSGKPLFP 185
Y D+W+VGCI EM+ G LFP
Sbjct: 202 YKENVDIWSVGCIMGEMIKGGVLFP 226
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 81/213 (38%), Gaps = 68/213 (31%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN--IQNEPEGVPSYLIAGVSLLKELEHD 100
Y+ ++ IG G G V + + VAIK ++ QN+ +Y + L+K + H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY--RELVLMKVVNHK 83
Query: 101 NIVRLLDVLTTGRY------VYLVFEYLDLDLG------------SFIRKHTITSIRPHI 142
NI+ LL+V T + VY+V E +D +L S++ + I+ H+
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIK-HL 142
Query: 143 KEVG------------------------------------SPY------KAPESRIRSSV 160
G +PY +APE I
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV-ILGMG 201
Query: 161 YSTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLS 193
Y D+W+VG I EM+ G LFP DH+
Sbjct: 202 YKENVDIWSVGVIMGEMIKGGVLFPG--TDHID 232
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 78/193 (40%), Gaps = 58/193 (30%)
Query: 46 VEKIGQGVFGEVYKCLNLETGKKVAIKMINI----------QNE------------PEGV 83
+++IG+G FGEVYK ++ T + VAIK+I++ Q E
Sbjct: 24 LDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYF 83
Query: 84 PSYL-----------IAGVSLLKELEHD------------NIVRLLDVLTTGRYVY---- 116
SYL + G S L L+ I++ LD L + R ++
Sbjct: 84 GSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSERKIHRDIK 143
Query: 117 ----LVFEYLDLDLGSFIRKHTITSIRPHIKE---VGSPYKAPESRIRSSVYSTPHDVWA 169
L+ E D+ L F +T + IK VG+P+ I+ S Y D+W+
Sbjct: 144 AANVLLSEQGDVKLADFGVAGQLTDTQ--IKRNXFVGTPFWMAPEVIKQSAYDFKADIWS 201
Query: 170 VGCIFAEMVSGKP 182
+G E+ G+P
Sbjct: 202 LGITAIELAKGEP 214
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 6/104 (5%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQN-EPEGVPSYLIAGVSLLKELEHD 100
+ + EKIG G FG V++ G VA+K++ Q+ E V +L V+++K L H
Sbjct: 38 DLNIKEKIGAGSFGTVHRAE--WHGSDVAVKILMEQDFHAERVNEFL-REVAIMKRLRHP 94
Query: 101 NIVRLLDVLTTGRYVYLVFEYLDLDLGSFIRKHTITSIRPHIKE 144
NIV + +T + +V EY L GS R + R + E
Sbjct: 95 NIVLFMGAVTQPPNLSIVTEY--LSRGSLYRLLHKSGAREQLDE 136
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Query: 34 QMEKVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQN---EPEGVPSYLIA- 89
+ +KV+D+ Y + E++G G F V KC TG + A K I + GV I
Sbjct: 6 KQQKVEDF-YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIER 64
Query: 90 GVSLLKELEHDNIVRLLDVLTTGRYVYLVFE 120
VS+L+++ H N++ L DV V L+ E
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILE 95
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Query: 34 QMEKVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQN---EPEGVPSYLIA- 89
+ +KV+D+ Y + E++G G F V KC TG + A K I + GV I
Sbjct: 6 KQQKVEDF-YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIER 64
Query: 90 GVSLLKELEHDNIVRLLDVLTTGRYVYLVFE 120
VS+L+++ H N++ L DV V L+ E
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILE 95
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 81/213 (38%), Gaps = 68/213 (31%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN--IQNEPEGVPSYLIAGVSLLKELEHD 100
Y+ ++ IG G G V + + VAIK ++ QN+ +Y + L+K + H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY--RELVLMKCVNHK 83
Query: 101 NIVRLLDVLTTGRY------VYLVFEY------------LDLDLGSFIRKHTITSIRPHI 142
NI+ LL+V T + VY+V E LD + S++ + I+ H+
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIK-HL 142
Query: 143 KEVG------------------------------------SPY------KAPESRIRSSV 160
G +PY +APE I
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV-ILGMG 201
Query: 161 YSTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLS 193
Y D+W+VGCI EM+ G LFP DH+
Sbjct: 202 YKENVDIWSVGCIMGEMIKGGVLFPG--TDHID 232
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Query: 34 QMEKVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQN---EPEGVPSYLIA- 89
+ +KV+D+ Y + E++G G F V KC TG + A K I + GV I
Sbjct: 6 KQQKVEDF-YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIER 64
Query: 90 GVSLLKELEHDNIVRLLDVLTTGRYVYLVFE 120
VS+L+++ H N++ L DV V L+ E
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILE 95
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 51/104 (49%), Gaps = 6/104 (5%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQN-EPEGVPSYLIAGVSLLKELEHD 100
+ + EKIG G FG V++ G VA+K++ Q+ E V +L V+++K L H
Sbjct: 38 DLNIKEKIGAGSFGTVHRAE--WHGSDVAVKILMEQDFHAERVNEFL-REVAIMKRLRHP 94
Query: 101 NIVRLLDVLTTGRYVYLVFEYLDLDLGSFIRKHTITSIRPHIKE 144
NIV + +T + +V EY L GS R + R + E
Sbjct: 95 NIVLFMGAVTQPPNLSIVTEY--LSRGSLYRLLHKSGAREQLDE 136
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 61/124 (49%), Gaps = 12/124 (9%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGK-----KVAIKMINIQNEPEGVPSYLIAGVSLLKE 96
N + + +G G FG+V + GK KVA+KM+ + + L++ + ++
Sbjct: 47 NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEA-LMSELKIMSH 105
Query: 97 L-EHDNIVRLLDVLTTGRYVYLVFEYLDL-DLGSFIRKHTITSIRPHIKEVGSPYKAPES 154
L +H+NIV LL T G V ++ EY DL +F+R+ P ++ +P PE
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKR----PPGLEYSYNPSHNPEE 161
Query: 155 RIRS 158
++ S
Sbjct: 162 QLSS 165
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Query: 34 QMEKVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQN---EPEGVPSYLIA- 89
+ +KV+D+ Y + E++G G F V KC TG + A K I + GV I
Sbjct: 6 KQQKVEDF-YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIER 64
Query: 90 GVSLLKELEHDNIVRLLDVLTTGRYVYLVFE 120
VS+L+++ H NI+ L DV V L+ E
Sbjct: 65 EVSILRQVLHPNIITLHDVYENRTDVVLILE 95
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 11/114 (9%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGK-----KVAIKMINIQNEPEGVPSYLIAGVSLLKE 96
N + + +G G FG+V + GK KVA+KM+ + + L++ + ++
Sbjct: 39 NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEA-LMSELKIMSH 97
Query: 97 L-EHDNIVRLLDVLTTGRYVYLVFEYLDL-DLGSFIRKHTITSIRPHIKEVGSP 148
L +H+NIV LL T G V ++ EY DL +F+R+ + KE G P
Sbjct: 98 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLD---KEDGRP 148
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 9/97 (9%)
Query: 44 KVVEKIGQGVFGEVYKC----LNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEH 99
K + ++G+G FG V C L TG+ VA+K +Q+ E + +LK L+H
Sbjct: 16 KFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVK--KLQHSTEEHLRDFEREIEILKSLQH 73
Query: 100 DNIVRLLDVLTTG--RYVYLVFEYLDL-DLGSFIRKH 133
DNIV+ V + R + L+ E+L L +++KH
Sbjct: 74 DNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKH 110
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 85/230 (36%), Gaps = 72/230 (31%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN--IQNEPEGVPSYLIAGVSLLKELEHD 100
Y+ ++ IG G G V + + VAIK ++ QN+ +Y + L+K + H
Sbjct: 28 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY--RELVLMKCVNHK 85
Query: 101 NIVRLLDVLTTGRY------VYLVFEY------------LDLDLGSFIRKHTITSIRPHI 142
NI+ LL+V T + VY+V E LD + S++ + I+ H+
Sbjct: 86 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK-HL 144
Query: 143 KEVG------SP------------------------------------YKAPESRIRSSV 160
G P Y+APE I
Sbjct: 145 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVVTRYYRAPEV-ILGMG 203
Query: 161 YSTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRYFTALTNYLVLPC 210
Y D+W+VGCI EM+ G LFP DH+ + + L PC
Sbjct: 204 YKENVDIWSVGCIMGEMIKGGVLFP--GTDHID----QWNKVIEQLGTPC 247
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINI----QNEPEGVPSYLIAGVSLLKELE 98
Y + IGQG +G V + +T AIK++N Q P+ V + V L+K+L
Sbjct: 28 YHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVER-IKTEVRLMKKLH 86
Query: 99 HDNIVRLLDVLTTGRYVYLVFE 120
H NI RL +V +Y+ LV E
Sbjct: 87 HPNIARLYEVYEDEQYICLVME 108
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Query: 34 QMEKVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQN---EPEGVPSYLIA- 89
+ +KV+D+ Y + E++G G F V KC TG + A K I + GV I
Sbjct: 6 KQQKVEDF-YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIER 64
Query: 90 GVSLLKELEHDNIVRLLDVLTTGRYVYLVFE 120
VS+L+++ H N++ L DV V L+ E
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILE 95
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 56/114 (49%), Gaps = 11/114 (9%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGK-----KVAIKMINIQNEPEGVPSYLIAGVSLLKE 96
N + + +G G FG+V + GK KVA+KM+ + + L++ + ++
Sbjct: 47 NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEA-LMSELKIMSH 105
Query: 97 L-EHDNIVRLLDVLTTGRYVYLVFEYLDL-DLGSFIRKHTITSIRPHIKEVGSP 148
L +H+NIV LL T G V ++ EY DL +F+R+ + KE G P
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLD---KEDGRP 156
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 46/91 (50%), Gaps = 5/91 (5%)
Query: 34 QMEKVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQN---EPEGVPSYLIA- 89
+ +KV+D+ Y + E++G G F V KC TG + A K I + GV I
Sbjct: 6 KQQKVEDF-YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIER 64
Query: 90 GVSLLKELEHDNIVRLLDVLTTGRYVYLVFE 120
VS+L+++ H N++ L DV V L+ E
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILE 95
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 145 VGSPYKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKP 182
VG+PY I S+Y+T D+W++G + EMV G+P
Sbjct: 202 VGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEP 239
Score = 35.8 bits (81), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/75 (25%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 48 KIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRLLD 107
KIG+G G V +G++VA+KM++++ + L V ++++ +H N+V +
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRR--ELLFNEVVIMRDYQHFNVVEMYK 109
Query: 108 VLTTGRYVYLVFEYL 122
G ++++ E+L
Sbjct: 110 SYLVGEELWVLMEFL 124
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In
Plant
Length = 483
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 29/45 (64%)
Query: 35 MEKVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNE 79
ME +++ KIG G FGE+Y N++T ++VAIK+ N++ +
Sbjct: 1 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK 45
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 77/205 (37%), Gaps = 66/205 (32%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN--IQNEPEGVPSYLIAGVSLLKELEHD 100
Y+ ++ IG G G V + + VAIK ++ QN+ +Y + L+K + H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY--RELVLMKCVNHK 83
Query: 101 NIVRLLDVLTTGRY------VYLVFEY------------LDLDLGSFIRKHTITSIRPHI 142
NI+ LL+V T + VY+V E LD + S++ + I+ H+
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK-HL 142
Query: 143 KEVG------------------------------------SP------YKAPESRIRSSV 160
G P Y+APE I
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEV-ILGMG 201
Query: 161 YSTPHDVWAVGCIFAEMVSGKPLFP 185
Y D+W+VGCI EMV K LFP
Sbjct: 202 YKENVDIWSVGCIMGEMVCHKILFP 226
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 43/85 (50%), Gaps = 10/85 (11%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
N K++E IG+G +G VYK E + VA+K+ + N + I V L +EHDN
Sbjct: 14 NLKLLELIGRGRYGAVYKGSLDE--RPVAVKVFSFANRQNFINEKNIYRVPL---MEHDN 68
Query: 102 IVRLL----DVLTTGRYVY-LVFEY 121
I R + V GR Y LV EY
Sbjct: 69 IARFIVGDERVTADGRMEYLLVMEY 93
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 78/205 (38%), Gaps = 66/205 (32%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN--IQNEPEGVPSYLIAGVSLLKELEHD 100
Y+ ++ IG G G V + + VAIK ++ QN+ +Y + L+K + H
Sbjct: 20 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY--RELVLMKCVNHK 77
Query: 101 NIVRLLDVLTTGRY------VYLVFEY------------LDLDLGSFIRKHTITSIRPHI 142
NI+ LL+V T + VY+V E LD + S++ + I+ H+
Sbjct: 78 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK-HL 136
Query: 143 KEVG------------------------------------SPY------KAPESRIRSSV 160
G +PY +APE I
Sbjct: 137 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV-ILGMG 195
Query: 161 YSTPHDVWAVGCIFAEMVSGKPLFP 185
Y D+W+VGCI EMV K LFP
Sbjct: 196 YKENVDLWSVGCIMGEMVCHKILFP 220
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 78/205 (38%), Gaps = 66/205 (32%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN--IQNEPEGVPSYLIAGVSLLKELEHD 100
Y+ ++ IG G G V + + VAIK ++ QN+ +Y + L+K + H
Sbjct: 31 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY--RELVLMKCVNHK 88
Query: 101 NIVRLLDVLTTGRY------VYLVFEY------------LDLDLGSFIRKHTITSIRPHI 142
NI+ LL+V T + VY+V E LD + S++ + I+ H+
Sbjct: 89 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK-HL 147
Query: 143 KEVG------------------------------------SPY------KAPESRIRSSV 160
G +PY +APE I
Sbjct: 148 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEV-ILGMG 206
Query: 161 YSTPHDVWAVGCIFAEMVSGKPLFP 185
Y D+W+VGCI EMV K LFP
Sbjct: 207 YKENVDLWSVGCIMGEMVCHKILFP 231
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 8/90 (8%)
Query: 49 IGQGVFGEVYK-CLNLETGKK---VAIKMINIQ-NEPEGVPSYLIAGVSLLKELEHDNIV 103
IG G FGEVYK L +GKK VAIK + E + V AG+ + + H NI+
Sbjct: 52 IGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGI--MGQFSHHNII 109
Query: 104 RLLDVLTTGRYVYLVFEYLDLD-LGSFIRK 132
RL V++ + + ++ EY++ L F+R+
Sbjct: 110 RLEGVISKYKPMMIITEYMENGALDKFLRE 139
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 82/210 (39%), Gaps = 60/210 (28%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
+Y+VV K+G+G + EV++ +N+ +K IK++ L + N
Sbjct: 32 DYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVK----KKKIKREIKILQNLMGGPN 87
Query: 102 IVRLLDVLTT--GRYVYLVFEYL-------------DLDLGSFIRK--------HTI--- 135
IV+LLD++ + L+FEY+ D D+ +I + H+
Sbjct: 88 IVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIM 147
Query: 136 -TSIRPH-----------------IKEVGSPYKAPESRIRSSVYSTPH------------ 165
++PH + E P K R+ S + P
Sbjct: 148 HRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSL 207
Query: 166 DVWAVGCIFAEMVSGKPLFPCGKKDHLSLI 195
D+W++GC+FA M+ K F G +H L+
Sbjct: 208 DMWSLGCMFAGMIFRKEPFFYGHDNHDQLV 237
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 8/100 (8%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGK-----KVAIKMINIQNEPEGVPSYLIAGVSLLKE 96
N + + +G G FG+V + GK KVA+KM+ + + L++ + ++
Sbjct: 47 NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEA-LMSELKIMSH 105
Query: 97 L-EHDNIVRLLDVLTTGRYVYLVFEYLDL-DLGSFIRKHT 134
L +H+NIV LL T G V ++ EY DL +F+R+ +
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKS 145
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 8/100 (8%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGK-----KVAIKMINIQNEPEGVPSYLIAGVSLLKE 96
N + + +G G FG+V + GK KVA+KM+ + + L++ + ++
Sbjct: 47 NLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEA-LMSELKIMSH 105
Query: 97 L-EHDNIVRLLDVLTTGRYVYLVFEYLDL-DLGSFIRKHT 134
L +H+NIV LL T G V ++ EY DL +F+R+ +
Sbjct: 106 LGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKS 145
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 48 KIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRLLD 107
K+G G FGEVY+ + + VA+K ++ + V +L +++KE++H N+V+LL
Sbjct: 18 KLGGGQFGEVYEGVWKKYSLTVAVK--TLKEDTMEVEEFL-KEAAVMKEIKHPNLVQLLG 74
Query: 108 VLTTGRYVYLVFEYL 122
V T Y++ E++
Sbjct: 75 VCTREPPFYIITEFM 89
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 77/205 (37%), Gaps = 66/205 (32%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN--IQNEPEGVPSYLIAGVSLLKELEHD 100
Y+ ++ IG G G V + + VAIK ++ QN+ +Y + L+K + H
Sbjct: 26 YQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAY--RELVLMKCVNHK 83
Query: 101 NIVRLLDVLTTGRY------VYLVFEY------------LDLDLGSFIRKHTITSIRPHI 142
NI+ LL+V T + VY+V E LD + S++ + I+ H+
Sbjct: 84 NIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIK-HL 142
Query: 143 KEVG------------------------------------SP------YKAPESRIRSSV 160
G P Y+APE I
Sbjct: 143 HSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEV-ILGMG 201
Query: 161 YSTPHDVWAVGCIFAEMVSGKPLFP 185
Y D+W+VGCI EMV K LFP
Sbjct: 202 YKENVDLWSVGCIMGEMVCHKILFP 226
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Query: 47 EKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRLL 106
E +G+G FG+ K + ETG+ + +K + I+ + E ++L V +++ LEH N+++ +
Sbjct: 16 EVLGKGCFGQAIKVTHRETGEVMVMKEL-IRFDEETQRTFL-KEVKVMRCLEHPNVLKFI 73
Query: 107 DVLTTGRYVYLVFEYL 122
VL + + + EY+
Sbjct: 74 GVLYKDKRLNFITEYI 89
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 18/86 (20%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAI-KMINIQNEPEGVPSYLIAGVS-------LL 94
Y + IG+G +GEV K+A+ K I+ + +P Y + V ++
Sbjct: 28 YTLENTIGRGSWGEV----------KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIM 77
Query: 95 KELEHDNIVRLLDVLTTGRYVYLVFE 120
K L+H NI+RL + +YLV E
Sbjct: 78 KSLDHPNIIRLYETFEDNTDIYLVME 103
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 18/86 (20%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAI-KMINIQNEPEGVPSYLIAGVS-------LL 94
Y + IG+G +GEV K+A+ K I+ + +P Y + V ++
Sbjct: 11 YTLENTIGRGSWGEV----------KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIM 60
Query: 95 KELEHDNIVRLLDVLTTGRYVYLVFE 120
K L+H NI+RL + +YLV E
Sbjct: 61 KSLDHPNIIRLYETFEDNTDIYLVME 86
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Query: 38 VKDW---NYKVVEKIGQGVFGEVYKCLN-LETGKKVAIKMINIQNEPEGVPSYLIAGVSL 93
V DW Y++V +G+G FG V +C++ G +VA+K+I + + I +
Sbjct: 27 VGDWLQERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEAARLEINVLEK 86
Query: 94 LKELEHDN---IVRLLDVLTTGRYVYLVFEYLDLDLGSFIR 131
+ E + DN V++ D ++ + FE L L F++
Sbjct: 87 INEKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLK 127
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 12/79 (15%)
Query: 122 LDLDLGSFIRKH--TITSIRPHIKEVGSPYKAPESRIRSSVYSTPHDVWAVGCIFAEMVS 179
+D +F +H TI S R Y+APE I +S P DVW++GCI E
Sbjct: 198 VDFGSATFDHEHHSTIVSTRH--------YRAPEV-ILELGWSQPCDVWSIGCIIFEYYV 248
Query: 180 GKPLFPC-GKKDHLSLIVR 197
G LF ++HL+++ R
Sbjct: 249 GFTLFQTHDNREHLAMMER 267
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 48 KIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRLLD 107
K+G G +GEVY+ + + VA+K ++ + V +L +++KE++H N+V+LL
Sbjct: 18 KLGGGQYGEVYEGVWKKYSLTVAVK--TLKEDTMEVEEFL-KEAAVMKEIKHPNLVQLLG 74
Query: 108 VLTTGRYVYLVFEYL 122
V T Y++ E++
Sbjct: 75 VCTREPPFYIIIEFM 89
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 48 KIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRLLD 107
K+G G +GEVY+ + + VA+K ++ + V +L +++KE++H N+V+LL
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVK--TLKEDTMEVEEFL-KEAAVMKEIKHPNLVQLLG 81
Query: 108 VLTTGRYVYLVFEYL 122
V T Y++ E++
Sbjct: 82 VCTREPPFYIIIEFM 96
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 86/211 (40%), Gaps = 62/211 (29%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHD- 100
+Y+VV K+G+G + EV++ +N+ +K IK++ + + +L+ L
Sbjct: 33 DYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPV-----KKKKIKREIKILQNLXGGP 87
Query: 101 NIVRLLDVLTT--GRYVYLVFEYL-------------DLDLGSFIRK--------HTI-- 135
NIV+LLD++ + L+FEY+ D D+ +I + H+
Sbjct: 88 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGI 147
Query: 136 --TSIRPH-----------------IKEVGSPYKAPESRIRSSVYSTPH----------- 165
++PH + E P K R+ S + P
Sbjct: 148 MHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYS 207
Query: 166 -DVWAVGCIFAEMVSGKPLFPCGKKDHLSLI 195
D+W++GC+FA M+ K F G +H L+
Sbjct: 208 LDMWSLGCMFAGMIFRKEPFFYGHDNHDQLV 238
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 86/211 (40%), Gaps = 62/211 (29%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHD- 100
+Y+VV K+G+G + EV++ +N+ +K IK++ + + +L+ L
Sbjct: 32 DYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPV-----KKKKIKREIKILQNLXGGP 86
Query: 101 NIVRLLDVLTT--GRYVYLVFEYL-------------DLDLGSFIRK--------HTI-- 135
NIV+LLD++ + L+FEY+ D D+ +I + H+
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGI 146
Query: 136 --TSIRPH-----------------IKEVGSPYKAPESRIRSSVYSTPH----------- 165
++PH + E P K R+ S + P
Sbjct: 147 MHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYS 206
Query: 166 -DVWAVGCIFAEMVSGKPLFPCGKKDHLSLI 195
D+W++GC+FA M+ K F G +H L+
Sbjct: 207 LDMWSLGCMFAGMIFRKEPFFYGHDNHDQLV 237
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 86/211 (40%), Gaps = 62/211 (29%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHD- 100
+Y+VV K+G+G + EV++ +N+ +K IK++ + + +L+ L
Sbjct: 32 DYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPV-----KKKKIKREIKILQNLXGGP 86
Query: 101 NIVRLLDVLTT--GRYVYLVFEYL-------------DLDLGSFIRK--------HTI-- 135
NIV+LLD++ + L+FEY+ D D+ +I + H+
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGI 146
Query: 136 --TSIRPH-----------------IKEVGSPYKAPESRIRSSVYSTPH----------- 165
++PH + E P K R+ S + P
Sbjct: 147 MHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYS 206
Query: 166 -DVWAVGCIFAEMVSGKPLFPCGKKDHLSLI 195
D+W++GC+FA M+ K F G +H L+
Sbjct: 207 LDMWSLGCMFAGMIFRKEPFFYGHDNHDQLV 237
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 57/111 (51%), Gaps = 10/111 (9%)
Query: 32 SEQMEKV-----KDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKM-INIQNEPEGVPS 85
SE+ KV K+ + ++ +G GVFG V+K + + G+ + I + I + + G S
Sbjct: 17 SEKANKVLARIFKETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQS 76
Query: 86 YLIAGVSLLK--ELEHDNIVRLLDVLTTGRYVYLVFEYLDL-DLGSFIRKH 133
+ +L L+H +IVRLL L G + LV +YL L L +R+H
Sbjct: 77 FQAVTDHMLAIGSLDHAHIVRLLG-LCPGSSLQLVTQYLPLGSLLDHVRQH 126
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 48 KIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRLLD 107
K+G G +GEVY+ + + VA+K ++ + V +L +++KE++H N+V+LL
Sbjct: 21 KLGGGQYGEVYEGVWKKYSLTVAVK--TLKEDTMEVEEFL-KEAAVMKEIKHPNLVQLLG 77
Query: 108 VLTTGRYVYLVFEYL 122
V T Y++ E++
Sbjct: 78 VCTREPPFYIIIEFM 92
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 86/211 (40%), Gaps = 62/211 (29%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHD- 100
+Y+VV K+G+G + EV++ +N+ +K IK++ + + +L+ L
Sbjct: 53 DYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPV-----KKKKIKREIKILQNLXGGP 107
Query: 101 NIVRLLDVLTT--GRYVYLVFEYL-------------DLDLGSFIRK--------HTI-- 135
NIV+LLD++ + L+FEY+ D D+ +I + H+
Sbjct: 108 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGI 167
Query: 136 --TSIRPH-----------------IKEVGSPYKAPESRIRSSVYSTPH----------- 165
++PH + E P K R+ S + P
Sbjct: 168 MHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYS 227
Query: 166 -DVWAVGCIFAEMVSGKPLFPCGKKDHLSLI 195
D+W++GC+FA M+ K F G +H L+
Sbjct: 228 LDMWSLGCMFAGMIFRKEPFFYGHDNHDQLV 258
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 86/211 (40%), Gaps = 62/211 (29%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHD- 100
+Y+VV K+G+G + EV++ +N+ +K IK++ + + +L+ L
Sbjct: 32 DYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPV-----KKKKIKREIKILQNLXGGP 86
Query: 101 NIVRLLDVLTT--GRYVYLVFEYL-------------DLDLGSFIRK--------HTI-- 135
NIV+LLD++ + L+FEY+ D D+ +I + H+
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGI 146
Query: 136 --TSIRPH-----------------IKEVGSPYKAPESRIRSSVYSTPH----------- 165
++PH + E P K R+ S + P
Sbjct: 147 MHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYS 206
Query: 166 -DVWAVGCIFAEMVSGKPLFPCGKKDHLSLI 195
D+W++GC+FA M+ K F G +H L+
Sbjct: 207 LDMWSLGCMFAGMIFRKEPFFYGHDNHDQLV 237
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2-
And Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2-
And Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2-
And Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2-
And Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2-
And Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 37/57 (64%), Gaps = 3/57 (5%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEH 99
+++VE +G G +G+VYK +++TG+ AIK++++ + E + +++LK+ H
Sbjct: 26 FELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEE---EEIKQEINMLKKYSH 79
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 48 KIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRLLD 107
K+G G +GEVY+ + + VA+K ++ + V +L +++KE++H N+V+LL
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVK--TLKEDTMEVEEFL-KEAAVMKEIKHPNLVQLLG 76
Query: 108 VLTTGRYVYLVFEYL 122
V T Y++ E++
Sbjct: 77 VCTREPPFYIIIEFM 91
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 9/87 (10%)
Query: 31 GSEQMEK-----VKDWNYKVVEKI-GQGVFGEVYKC-LNLETGK--KVAIKMINIQNEPE 81
GSE+++ V D N ++ KI G+G FG V + L E G KVA+K + + N +
Sbjct: 18 GSEELQNKLEDVVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQ 77
Query: 82 GVPSYLIAGVSLLKELEHDNIVRLLDV 108
++ + +K+ H N++RLL V
Sbjct: 78 REIEEFLSEAACMKDFSHPNVIRLLGV 104
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 34 QMEKVKDWNYKVVEKIGQGVFGEVYKCLNLETGK----KVAIKMINIQNEPEGVPSYLIA 89
Q+ +K+ K V+ +G G FG VYK + + G+ VAIK++N P+ ++
Sbjct: 31 QLRILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDE 90
Query: 90 GVSLLKELEHDNIVRLLDV 108
+ ++ ++H ++VRLL V
Sbjct: 91 AL-IMASMDHPHLVRLLGV 108
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAG-VSLLKELEHDN 101
Y + E +G+G FG V++C+ + K K + ++ G L+ +S+L H N
Sbjct: 7 YMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK----GTDQVLVKKEISILNIARHRN 62
Query: 102 IVRLLDVLTTGRYVYLVFEYLD-LDL 126
I+ L + + + ++FE++ LD+
Sbjct: 63 ILHLHESFESMEELVMIFEFISGLDI 88
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 48 KIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRLLD 107
K+G G +GEVY+ + + VA+K ++ + V +L +++KE++H N+V+LL
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVK--TLKEDTMEVEEFL-KEAAVMKEIKHPNLVQLLG 76
Query: 108 VLTTGRYVYLVFEYL 122
V T Y++ E++
Sbjct: 77 VCTREPPFYIIIEFM 91
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 48 KIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRLLD 107
K+G G +GEVY + + VA+K ++ + V +L +++KE++H N+V+LL
Sbjct: 39 KLGGGQYGEVYVGVWKKYSLTVAVK--TLKEDTMEVEEFL-KEAAVMKEIKHPNLVQLLG 95
Query: 108 VLTTGRYVYLVFEYL 122
V T Y+V EY+
Sbjct: 96 VCTLEPPFYIVTEYM 110
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 48 KIGQGVFGEVY-KCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRLL 106
K+GQG FGEV+ N T +VAIK + N P + ++K+L H+ +V+L
Sbjct: 192 KLGQGCFGEVWMGTWNGTT--RVAIKTLKPGNM---SPEAFLQEAQVMKKLRHEKLVQLY 246
Query: 107 DVLTTGRYVYLVFEYL 122
V++ +Y+V EY+
Sbjct: 247 AVVSE-EPIYIVTEYM 261
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 81/210 (38%), Gaps = 60/210 (28%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
+Y+VV K+G+G + EV++ +N+ +K IK++ L N
Sbjct: 32 DYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVK----KKKIKREIKILQNLCGGPN 87
Query: 102 IVRLLDVLTT--GRYVYLVFEYL-------------DLDLGSFIRK--------HTI--- 135
IV+LLD++ + L+FEY+ D D+ +I + H+
Sbjct: 88 IVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIM 147
Query: 136 -TSIRPH-----------------IKEVGSPYKAPESRIRSSVYSTPH------------ 165
++PH + E P K R+ S + P
Sbjct: 148 HRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSL 207
Query: 166 DVWAVGCIFAEMVSGKPLFPCGKKDHLSLI 195
D+W++GC+FA M+ K F G +H L+
Sbjct: 208 DMWSLGCMFAGMIFRKEPFFYGHDNHDQLV 237
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 81/210 (38%), Gaps = 60/210 (28%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
+Y+VV K+G+G + EV++ +N+ +K IK++ L N
Sbjct: 34 DYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVK----KKKIKREIKILQNLCGGPN 89
Query: 102 IVRLLDVLTT--GRYVYLVFEYL-------------DLDLGSFIRK--------HTI--- 135
IV+LLD++ + L+FEY+ D D+ +I + H+
Sbjct: 90 IVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIM 149
Query: 136 -TSIRPH-----------------IKEVGSPYKAPESRIRSSVYSTPH------------ 165
++PH + E P K R+ S + P
Sbjct: 150 HRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSL 209
Query: 166 DVWAVGCIFAEMVSGKPLFPCGKKDHLSLI 195
D+W++GC+FA M+ K F G +H L+
Sbjct: 210 DMWSLGCMFAGMIFRKEPFFYGHDNHDQLV 239
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 44/79 (55%), Gaps = 5/79 (6%)
Query: 34 QMEKVKDWNYKVVEKIGQGVFGEVYKCLNLETGK----KVAIKMINIQNEPEGVPSYLIA 89
Q+ +K+ K V+ +G G FG VYK + + G+ VAIK++N P+ ++
Sbjct: 8 QLRILKETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDE 67
Query: 90 GVSLLKELEHDNIVRLLDV 108
+ ++ ++H ++VRLL V
Sbjct: 68 AL-IMASMDHPHLVRLLGV 85
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 59/118 (50%), Gaps = 12/118 (10%)
Query: 49 IGQGVFGEV--YKCLNLETGK-----KVAIKMINIQNEPEGVPSYLIAGVSLLKEL-EHD 100
+G+G FG+V + + L+ K KVA+KM+ + E S LI+ + ++K + +H
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLK-SDATEKDLSDLISEMEMMKMIGKHK 94
Query: 101 NIVRLLDVLTTGRYVYLVFEYLDLDLGSFIRKHTITSIRPHIKEVGSPYKAPESRIRS 158
NI+ LL T +Y++ EY +R++ P ++ +P PE ++ S
Sbjct: 95 NIINLLGACTQDGPLYVIVEYAS---KGNLREYLQARRPPGLEYCYNPSHNPEEQLSS 149
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 81/210 (38%), Gaps = 60/210 (28%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
+Y+VV K+G+G + EV++ +N+ +K IK++ L N
Sbjct: 32 DYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVK----KKKIKREIKILQNLCGGPN 87
Query: 102 IVRLLDVLTT--GRYVYLVFEYL-------------DLDLGSFIRK--------HTI--- 135
IV+LLD++ + L+FEY+ D D+ +I + H+
Sbjct: 88 IVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIM 147
Query: 136 -TSIRPH-----------------IKEVGSPYKAPESRIRSSVYSTPH------------ 165
++PH + E P K R+ S + P
Sbjct: 148 HRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSL 207
Query: 166 DVWAVGCIFAEMVSGKPLFPCGKKDHLSLI 195
D+W++GC+FA M+ K F G +H L+
Sbjct: 208 DMWSLGCMFAGMIFRKEPFFYGHDNHDQLV 237
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 81/210 (38%), Gaps = 60/210 (28%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
+Y+VV K+G+G + EV++ +N+ +K IK++ L N
Sbjct: 33 DYEVVRKVGRGKYSEVFEGINVNNNEKCIIKILKPVK----KKKIKREIKILQNLCGGPN 88
Query: 102 IVRLLDVLTT--GRYVYLVFEYL-------------DLDLGSFIRK--------HTI--- 135
IV+LLD++ + L+FEY+ D D+ +I + H+
Sbjct: 89 IVKLLDIVRDQHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYELLKALDYCHSQGIM 148
Query: 136 -TSIRPH-----------------IKEVGSPYKAPESRIRSSVYSTPH------------ 165
++PH + E P K R+ S + P
Sbjct: 149 HRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSL 208
Query: 166 DVWAVGCIFAEMVSGKPLFPCGKKDHLSLI 195
D+W++GC+FA M+ K F G +H L+
Sbjct: 209 DMWSLGCMFAGMIFRKEPFFYGHDNHDQLV 238
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 47/81 (58%), Gaps = 7/81 (8%)
Query: 44 KVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGV-PSYLIAGVSLLKELEHDNI 102
++++++G G FGEV+ KVAIK + +P + P + ++K+L+HD +
Sbjct: 12 QLIKRLGNGQFGEVWMG-TWNGNTKVAIKTL----KPGTMSPESFLEEAQIMKKLKHDKL 66
Query: 103 VRLLDVLTTGRYVYLVFEYLD 123
V+L V++ +Y+V EY++
Sbjct: 67 VQLYAVVSE-EPIYIVTEYMN 86
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 48 KIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRLLD 107
K+G G +GEVY+ + + VA+K ++ + V +L +++KE++H N+V+LL
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVK--TLKEDTMEVEEFL-KEAAVMKEIKHPNLVQLLG 81
Query: 108 VLTTGRYVYLVFEYL 122
V T Y++ E++
Sbjct: 82 VCTREPPFYIITEFM 96
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 5/99 (5%)
Query: 39 KDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKM-INIQNEPEGVPSYLIAGVSLLK-- 95
K+ + ++ +G GVFG V+K + + G+ + I + I + + G S+ +L
Sbjct: 11 KETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIG 70
Query: 96 ELEHDNIVRLLDVLTTGRYVYLVFEYLDL-DLGSFIRKH 133
L+H +IVRLL L G + LV +YL L L +R+H
Sbjct: 71 SLDHAHIVRLLG-LCPGSSLQLVTQYLPLGSLLDHVRQH 108
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 59/118 (50%), Gaps = 12/118 (10%)
Query: 49 IGQGVFGEV--YKCLNLETGK-----KVAIKMINIQNEPEGVPSYLIAGVSLLKEL-EHD 100
+G+G FG+V + + L+ K KVA+KM+ + E S LI+ + ++K + +H
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLK-SDATEKDLSDLISEMEMMKMIGKHK 79
Query: 101 NIVRLLDVLTTGRYVYLVFEYLDLDLGSFIRKHTITSIRPHIKEVGSPYKAPESRIRS 158
NI+ LL T +Y++ EY +R++ P ++ +P PE ++ S
Sbjct: 80 NIINLLGACTQDGPLYVIVEYAS---KGNLREYLQARRPPGLEYCYNPSHNPEEQLSS 134
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 48 KIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRLLD 107
K+G G +GEVY+ + + VA+K ++ + V +L +++KE++H N+V+LL
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVK--TLKEDTMEVEEFL-KEAAVMKEIKHPNLVQLLG 76
Query: 108 VLTTGRYVYLVFEYL 122
V T Y++ E++
Sbjct: 77 VCTREPPFYIITEFM 91
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 48 KIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRLLD 107
K+G G +GEVY+ + + VA+K ++ + V +L +++KE++H N+V+LL
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVK--TLKEDTMEVEEFL-KEAAVMKEIKHPNLVQLLG 81
Query: 108 VLTTGRYVYLVFEYL 122
V T Y++ E++
Sbjct: 82 VCTREPPFYIITEFM 96
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 59/115 (51%), Gaps = 9/115 (7%)
Query: 44 KVVEKIGQGVFGEVYKCLNLETGKK---VAIKMINIQNEPEGVPSYLIAGVSLLKELEHD 100
K+ + IG G FGEV GK+ VAIK + + +L + S++ + +H
Sbjct: 11 KIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFL-SEASIMGQFDHP 69
Query: 101 NIVRLLDVLTTGRYVYLVFEYLD-LDLGSFIRKH----TITSIRPHIKEVGSPYK 150
NI+ L V+T + V ++ EY++ L +F+RK+ T+ + ++ +GS K
Sbjct: 70 NIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMK 124
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 59/115 (51%), Gaps = 9/115 (7%)
Query: 44 KVVEKIGQGVFGEVYKCLNLETGKK---VAIKMINIQNEPEGVPSYLIAGVSLLKELEHD 100
K+ + IG G FGEV GK+ VAIK + + +L + S++ + +H
Sbjct: 32 KIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFL-SEASIMGQFDHP 90
Query: 101 NIVRLLDVLTTGRYVYLVFEYLD-LDLGSFIRKH----TITSIRPHIKEVGSPYK 150
NI+ L V+T + V ++ EY++ L +F+RK+ T+ + ++ +GS K
Sbjct: 91 NIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMK 145
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 48 KIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRLLD 107
K+G G +GEVY+ + + VA+K ++ + V +L +++KE++H N+V+LL
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVK--TLKEDTMEVEEFL-KEAAVMKEIKHPNLVQLLG 81
Query: 108 VLTTGRYVYLVFEYL 122
V T Y++ E++
Sbjct: 82 VCTREPPFYIITEFM 96
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 48 KIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRLLD 107
K+G G +GEVY+ + + VA+K ++ + V +L +++KE++H N+V+LL
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVK--TLKEDTMEVEEFL-KEAAVMKEIKHPNLVQLLG 76
Query: 108 VLTTGRYVYLVFEYL 122
V T Y++ E++
Sbjct: 77 VCTREPPFYIITEFM 91
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 48 KIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRLLD 107
K+G G +GEVY+ + + VA+K ++ + V +L +++KE++H N+V+LL
Sbjct: 24 KLGGGQYGEVYEGVWKKYSLTVAVK--TLKEDTMEVEEFL-KEAAVMKEIKHPNLVQLLG 80
Query: 108 VLTTGRYVYLVFEYL 122
V T Y++ E++
Sbjct: 81 VCTREPPFYIITEFM 95
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 48 KIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRLLD 107
K+G G +GEVY+ + + VA+K ++ + V +L +++KE++H N+V+LL
Sbjct: 18 KLGGGQYGEVYEGVWKKYSLTVAVK--TLKEDTMEVEEFL-KEAAVMKEIKHPNLVQLLG 74
Query: 108 VLTTGRYVYLVFEYL 122
V T Y++ E++
Sbjct: 75 VCTREPPFYIITEFM 89
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 36.6 bits (83), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 48 KIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRLLD 107
K+G G +GEVY+ + + VA+K ++ + V +L +++KE++H N+V+LL
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVK--TLKEDTMEVEEFL-KEAAVMKEIKHPNLVQLLG 78
Query: 108 VLTTGRYVYLVFEYL 122
V T Y++ E++
Sbjct: 79 VCTREPPFYIITEFM 93
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 59/115 (51%), Gaps = 9/115 (7%)
Query: 44 KVVEKIGQGVFGEVYKCLNLETGKK---VAIKMINIQNEPEGVPSYLIAGVSLLKELEHD 100
K+ + IG G FGEV GK+ VAIK + + +L + S++ + +H
Sbjct: 17 KIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFL-SEASIMGQFDHP 75
Query: 101 NIVRLLDVLTTGRYVYLVFEYLD-LDLGSFIRKH----TITSIRPHIKEVGSPYK 150
NI+ L V+T + V ++ EY++ L +F+RK+ T+ + ++ +GS K
Sbjct: 76 NIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMK 130
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 52/102 (50%), Gaps = 15/102 (14%)
Query: 36 EKVKDW--------NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNE---PEGVP 84
+++ DW Y + IG+GV V +C++ TG + A+K++ + E PE +
Sbjct: 81 DELPDWAAAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLE 140
Query: 85 SYLIAG---VSLLKELE-HDNIVRLLDVLTTGRYVYLVFEYL 122
A +L+++ H +I+ L+D + +++LVF+ +
Sbjct: 141 EVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLM 182
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 48 KIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRLLD 107
K+G G +GEVY+ + + VA+K ++ + V +L +++KE++H N+V+LL
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVK--TLKEDTMEVEEFL-KEAAVMKEIKHPNLVQLLG 78
Query: 108 VLTTGRYVYLVFEYL 122
V T Y++ E++
Sbjct: 79 VCTREPPFYIITEFM 93
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 125 DLGSFIRKHTITSIRPHIKEVGSPYKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
DLG + +I+ + VG Y APE +++ Y+ D WA+GC+ EM++G+ F
Sbjct: 329 DLGLAVHVPEGQTIKGRVGTVG--YMAPEV-VKNERYTFSPDWWALGCLLYEMIAGQSPF 385
Query: 185 PCGKK 189
KK
Sbjct: 386 QQRKK 390
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 48 KIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRLLD 107
K+G G +GEVY+ + + VA+K ++ + V +L +++KE++H N+V+LL
Sbjct: 21 KLGGGQYGEVYEGVWKKYSLTVAVK--TLKEDTMEVEEFL-KEAAVMKEIKHPNLVQLLG 77
Query: 108 VLTTGRYVYLVFEYL 122
V T Y++ E++
Sbjct: 78 VCTREPPFYIITEFM 92
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 48 KIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRLLD 107
K+G G +GEVY+ + + VA+K ++ + V +L +++KE++H N+V+LL
Sbjct: 25 KLGGGQYGEVYEGVWKKYSLTVAVK--TLKEDTMEVEEFL-KEAAVMKEIKHPNLVQLLG 81
Query: 108 VLTTGRYVYLVFEYL 122
V T Y++ E++
Sbjct: 82 VCTREPPFYIITEFM 96
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 48 KIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRLLD 107
K+G G +GEVY+ + + VA+K ++ + V +L +++KE++H N+V+LL
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVK--TLKEDTMEVEEFL-KEAAVMKEIKHPNLVQLLG 76
Query: 108 VLTTGRYVYLVFEYL 122
V T Y++ E++
Sbjct: 77 VCTREPPFYIITEFM 91
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 48 KIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRLLD 107
K+G G +GEVY+ + + VA+K ++ + V +L +++KE++H N+V+LL
Sbjct: 22 KLGGGQYGEVYEGVWKKYSLTVAVK--TLKEDTMEVEEFL-KEAAVMKEIKHPNLVQLLG 78
Query: 108 VLTTGRYVYLVFEYL 122
V T Y++ E++
Sbjct: 79 VCTREPPFYIITEFM 93
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 48 KIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRLLD 107
KIG+G G V +GK VA+K ++++ + L V ++++ +H+N+V + +
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR--ELLFNEVVIMRDYQHENVVEMYN 88
Query: 108 VLTTGRYVYLVFEYLDLDLGSFIRKHT 134
G +++V E+L+ + I HT
Sbjct: 89 SYLVGDELWVVMEFLEGGALTDIVTHT 115
Score = 31.6 bits (70), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 145 VGSPYKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
VG+PY I Y D+W++G + EMV G+P +
Sbjct: 181 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 220
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 48 KIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRLLD 107
KIG+G G V +GK VA+K ++++ + L V ++++ +H+N+V + +
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR--ELLFNEVVIMRDYQHENVVEMYN 95
Query: 108 VLTTGRYVYLVFEYLDLDLGSFIRKHT 134
G +++V E+L+ + I HT
Sbjct: 96 SYLVGDELWVVMEFLEGGALTDIVTHT 122
Score = 31.6 bits (70), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 145 VGSPYKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
VG+PY I Y D+W++G + EMV G+P +
Sbjct: 188 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 227
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 48 KIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRLLD 107
K+G G +GEVY+ + + VA+K ++ + V +L +++KE++H N+V+LL
Sbjct: 20 KLGGGQYGEVYEGVWKKYSLTVAVK--TLKEDTMEVEEFL-KEAAVMKEIKHPNLVQLLG 76
Query: 108 VLTTGRYVYLVFEYL 122
V T Y++ E++
Sbjct: 77 VCTREPPFYIITEFM 91
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 48 KIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRLLD 107
KIG+G G V +GK VA+K ++++ + L V ++++ +H+N+V + +
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR--ELLFNEVVIMRDYQHENVVEMYN 84
Query: 108 VLTTGRYVYLVFEYLDLDLGSFIRKHT 134
G +++V E+L+ + I HT
Sbjct: 85 SYLVGDELWVVMEFLEGGALTDIVTHT 111
Score = 32.0 bits (71), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 145 VGSPYKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
VG+PY I Y D+W++G + EMV G+P +
Sbjct: 177 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 216
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 11/48 (22%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVS-----------GKPLFP 185
Y+APE + Y+ DVW++GCIFAE+++ PLFP
Sbjct: 249 YRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFP 296
Score = 35.4 bits (80), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 9/101 (8%)
Query: 40 DWN----YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLK 95
DW Y++ IG G +G V + + + VAIK I E ++ +++L
Sbjct: 48 DWQIPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILN 107
Query: 96 ELEHDNIVRLLDVLTTGRY-----VYLVFEYLDLDLGSFIR 131
L HD++V++LD++ +Y+V E D D R
Sbjct: 108 RLNHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFR 148
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 125 DLGSFIRKHTITSIRPHIKEVGSPYKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
DLG + +I+ + VG Y APE +++ Y+ D WA+GC+ EM++G+ F
Sbjct: 329 DLGLAVHVPEGQTIKGRVGTVG--YMAPEV-VKNERYTFSPDWWALGCLLYEMIAGQSPF 385
Query: 185 PCGKK 189
KK
Sbjct: 386 QQRKK 390
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 48 KIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRLLD 107
K+G G +GEVY+ + + VA+K ++ + V +L +++KE++H N+V+LL
Sbjct: 227 KLGGGQYGEVYEGVWKKYSLTVAVK--TLKEDTMEVEEFLKE-AAVMKEIKHPNLVQLLG 283
Query: 108 VLTTGRYVYLVFEYL 122
V T Y++ E++
Sbjct: 284 VCTREPPFYIITEFM 298
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 48 KIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRLLD 107
KIG+G G V +GK VA+K ++++ + L V ++++ +H+N+V + +
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR--ELLFNEVVIMRDYQHENVVEMYN 93
Query: 108 VLTTGRYVYLVFEYLDLDLGSFIRKHT 134
G +++V E+L+ + I HT
Sbjct: 94 SYLVGDELWVVMEFLEGGALTDIVTHT 120
Score = 31.6 bits (70), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 145 VGSPYKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
VG+PY I Y D+W++G + EMV G+P +
Sbjct: 186 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 225
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 48 KIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRLLD 107
K+G G +GEVY+ + + VA+K ++ + V +L +++KE++H N+V+LL
Sbjct: 33 KLGGGQYGEVYEGVWKKYSLTVAVK--TLKEDTMEVEEFL-KEAAVMKEIKHPNLVQLLG 89
Query: 108 VLTTGRYVYLVFEYL 122
V T Y++ E++
Sbjct: 90 VCTREPPFYIITEFM 104
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 48 KIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRLLD 107
K+G G +GEVY+ + + VA+K ++ + V +L +++KE++H N+V+LL
Sbjct: 266 KLGGGQYGEVYEGVWKKYSLTVAVK--TLKEDTMEVEEFLKE-AAVMKEIKHPNLVQLLG 322
Query: 108 VLTTGRYVYLVFEYL 122
V T Y++ E++
Sbjct: 323 VCTREPPFYIITEFM 337
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 48 KIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRLLD 107
KIG+G G V +GK VA+K ++++ + L V ++++ +H+N+V + +
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR--ELLFNEVVIMRDYQHENVVEMYN 215
Query: 108 VLTTGRYVYLVFEYLDLDLGSFIRKHT 134
G +++V E+L+ + I HT
Sbjct: 216 SYLVGDELWVVMEFLEGGALTDIVTHT 242
Score = 30.8 bits (68), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 145 VGSPYKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
VG+PY I Y D+W++G + EMV G+P +
Sbjct: 308 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 347
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 36.2 bits (82), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 59/118 (50%), Gaps = 12/118 (10%)
Query: 49 IGQGVFGEV--YKCLNLETGK-----KVAIKMINIQNEPEGVPSYLIAGVSLLKEL-EHD 100
+G+G FG+V + + L+ K KVA+KM+ + E S LI+ + ++K + +H
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLK-SDATEKDLSDLISEMEMMKMIGKHK 83
Query: 101 NIVRLLDVLTTGRYVYLVFEYLDLDLGSFIRKHTITSIRPHIKEVGSPYKAPESRIRS 158
NI+ LL T +Y++ EY +R++ P ++ +P PE ++ S
Sbjct: 84 NIINLLGACTQDGPLYVIVEYAS---KGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 138
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 48 KIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRLLD 107
KIG+G G V +GK VA+K ++++ + L V ++++ +H+N+V + +
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRR--ELLFNEVVIMRDYQHENVVEMYN 138
Query: 108 VLTTGRYVYLVFEYLDLDLGSFIRKHT 134
G +++V E+L+ + I HT
Sbjct: 139 SYLVGDELWVVMEFLEGGALTDIVTHT 165
Score = 31.2 bits (69), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 21/40 (52%)
Query: 145 VGSPYKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
VG+PY I Y D+W++G + EMV G+P +
Sbjct: 231 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPY 270
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Query: 49 IGQGVFGEVYKCLNLETGKK---VAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRL 105
IG G FGEV GK+ VAIK + + + +L S++ + +H NI+ L
Sbjct: 30 IGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFL-GEASIMGQFDHPNIIHL 88
Query: 106 LDVLTTGRYVYLVFEYLD-LDLGSFIRKH 133
V+T + V +V EY++ L +F++K+
Sbjct: 89 EGVVTKSKPVMIVTEYMENGSLDTFLKKN 117
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 59/118 (50%), Gaps = 12/118 (10%)
Query: 49 IGQGVFGEV--YKCLNLETGK-----KVAIKMINIQNEPEGVPSYLIAGVSLLKEL-EHD 100
+G+G FG+V + + L+ K KVA+KM+ + E S LI+ + ++K + +H
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLK-SDATEKDLSDLISEMEMMKMIGKHK 94
Query: 101 NIVRLLDVLTTGRYVYLVFEYLDLDLGSFIRKHTITSIRPHIKEVGSPYKAPESRIRS 158
NI+ LL T +Y++ EY +R++ P ++ +P PE ++ S
Sbjct: 95 NIINLLGACTQDGPLYVIVEYAS---KGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 149
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 59/118 (50%), Gaps = 12/118 (10%)
Query: 49 IGQGVFGEV--YKCLNLETGK-----KVAIKMINIQNEPEGVPSYLIAGVSLLKEL-EHD 100
+G+G FG+V + + L+ K KVA+KM+ + E S LI+ + ++K + +H
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLK-SDATEKDLSDLISEMEMMKMIGKHK 87
Query: 101 NIVRLLDVLTTGRYVYLVFEYLDLDLGSFIRKHTITSIRPHIKEVGSPYKAPESRIRS 158
NI+ LL T +Y++ EY +R++ P ++ +P PE ++ S
Sbjct: 88 NIINLLGACTQDGPLYVIVEYAS---KGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 142
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 59/118 (50%), Gaps = 12/118 (10%)
Query: 49 IGQGVFGEV--YKCLNLETGK-----KVAIKMINIQNEPEGVPSYLIAGVSLLKEL-EHD 100
+G+G FG+V + + L+ K KVA+KM+ + E S LI+ + ++K + +H
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLK-SDATEKDLSDLISEMEMMKMIGKHK 86
Query: 101 NIVRLLDVLTTGRYVYLVFEYLDLDLGSFIRKHTITSIRPHIKEVGSPYKAPESRIRS 158
NI+ LL T +Y++ EY +R++ P ++ +P PE ++ S
Sbjct: 87 NIINLLGACTQDGPLYVIVEYAS---KGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 141
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 59/118 (50%), Gaps = 12/118 (10%)
Query: 49 IGQGVFGEV--YKCLNLETGK-----KVAIKMINIQNEPEGVPSYLIAGVSLLKEL-EHD 100
+G+G FG+V + + L+ K KVA+KM+ + E S LI+ + ++K + +H
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLK-SDATEKDLSDLISEMEMMKMIGKHK 94
Query: 101 NIVRLLDVLTTGRYVYLVFEYLDLDLGSFIRKHTITSIRPHIKEVGSPYKAPESRIRS 158
NI+ LL T +Y++ EY +R++ P ++ +P PE ++ S
Sbjct: 95 NIINLLGACTQDGPLYVIVEYAS---KGNLREYLQARRPPGLEFSFNPSHNPEEQLSS 149
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 59/118 (50%), Gaps = 12/118 (10%)
Query: 49 IGQGVFGEV--YKCLNLETGK-----KVAIKMINIQNEPEGVPSYLIAGVSLLKEL-EHD 100
+G+G FG+V + + L+ K KVA+KM+ + E S LI+ + ++K + +H
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLK-SDATEKDLSDLISEMEMMKMIGKHK 94
Query: 101 NIVRLLDVLTTGRYVYLVFEYLDLDLGSFIRKHTITSIRPHIKEVGSPYKAPESRIRS 158
NI+ LL T +Y++ EY +R++ P ++ +P PE ++ S
Sbjct: 95 NIINLLGACTQDGPLYVIVEYAS---KGNLREYLQAREPPGLEYSYNPSHNPEEQLSS 149
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIV 196
Y++PE + Y D+W++GCI EM +G+PLF + D ++ IV
Sbjct: 224 YRSPEVLL-GMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIV 271
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 57/114 (50%), Gaps = 14/114 (12%)
Query: 45 VVEKIGQGVFGEVYK-----CLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEH 99
++ ++GQG FG VY+ + E +VA+K +N +L S++K
Sbjct: 18 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEA-SVMKGFTC 76
Query: 100 DNIVRLLDVLTTGRYVYLVFEYLDL-DLGSFIRKHTITSIRPHIKEVGSPYKAP 152
++VRLL V++ G+ +V E + DL S++R S+RP + +P + P
Sbjct: 77 HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLR-----SLRPEAE--NNPGRPP 123
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 59/118 (50%), Gaps = 12/118 (10%)
Query: 49 IGQGVFGEV--YKCLNLETGK-----KVAIKMINIQNEPEGVPSYLIAGVSLLKEL-EHD 100
+G+G FG+V + + L+ K KVA+KM+ + E S LI+ + ++K + +H
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLK-SDATEKDLSDLISEMEMMKMIGKHK 135
Query: 101 NIVRLLDVLTTGRYVYLVFEYLDLDLGSFIRKHTITSIRPHIKEVGSPYKAPESRIRS 158
NI+ LL T +Y++ EY +R++ P ++ +P PE ++ S
Sbjct: 136 NIINLLGACTQDGPLYVIVEYAS---KGNLREYLQARRPPGLEYSYNPSHNPEEQLSS 190
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 48 KIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRLLD 107
K+G G +GEVY+ + + VA+K ++ + V +L +++KE++H N+V+LL
Sbjct: 224 KLGGGQYGEVYEGVWKKYSLTVAVK--TLKEDTMEVEEFLKE-AAVMKEIKHPNLVQLLG 280
Query: 108 VLTTGRYVYLVFEYL 122
V T Y++ E++
Sbjct: 281 VCTREPPFYIITEFM 295
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIV 196
Y++PE + Y D+W++GCI EM +G+PLF + D ++ IV
Sbjct: 224 YRSPEVLL-GMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIV 271
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 57/114 (50%), Gaps = 14/114 (12%)
Query: 45 VVEKIGQGVFGEVYK-----CLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEH 99
++ ++GQG FG VY+ + E +VA+K +N +L S++K
Sbjct: 21 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEA-SVMKGFTC 79
Query: 100 DNIVRLLDVLTTGRYVYLVFEYLDL-DLGSFIRKHTITSIRPHIKEVGSPYKAP 152
++VRLL V++ G+ +V E + DL S++R S+RP + +P + P
Sbjct: 80 HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLR-----SLRPEAE--NNPGRPP 126
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 35.8 bits (81), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLIV 196
Y++PE + Y D+W++GCI EM +G+PLF + D ++ IV
Sbjct: 205 YRSPEVLL-GMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIV 252
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 35.8 bits (81), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 57/114 (50%), Gaps = 14/114 (12%)
Query: 45 VVEKIGQGVFGEVYK-----CLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEH 99
++ ++GQG FG VY+ + E +VA+K +N +L S++K
Sbjct: 21 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEA-SVMKGFTC 79
Query: 100 DNIVRLLDVLTTGRYVYLVFEYLDL-DLGSFIRKHTITSIRPHIKEVGSPYKAP 152
++VRLL V++ G+ +V E + DL S++R S+RP + +P + P
Sbjct: 80 HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLR-----SLRPEAE--NNPGRPP 126
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 35.8 bits (81), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 37 KVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN-IQNEPEGVPSYLIAGVSLLK 95
++K +Y+VV+ IG+G FGEV + T K A+K+++ + ++ ++
Sbjct: 70 RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMA 129
Query: 96 ELEHDNIVRLLDVLTTGRYVYLVFEYL 122
+V+L RY+Y+V EY+
Sbjct: 130 FANSPWVVQLFYAFQDDRYLYMVMEYM 156
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 35.8 bits (81), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 57/114 (50%), Gaps = 14/114 (12%)
Query: 45 VVEKIGQGVFGEVYK-----CLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEH 99
++ ++GQG FG VY+ + E +VA+K +N +L S++K
Sbjct: 21 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEA-SVMKGFTC 79
Query: 100 DNIVRLLDVLTTGRYVYLVFEYLDL-DLGSFIRKHTITSIRPHIKEVGSPYKAP 152
++VRLL V++ G+ +V E + DL S++R S+RP + +P + P
Sbjct: 80 HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLR-----SLRPEAE--NNPGRPP 126
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 35.8 bits (81), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 57/114 (50%), Gaps = 14/114 (12%)
Query: 45 VVEKIGQGVFGEVYK-----CLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEH 99
++ ++GQG FG VY+ + E +VA+K +N +L S++K
Sbjct: 21 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEA-SVMKGFTC 79
Query: 100 DNIVRLLDVLTTGRYVYLVFEYLDL-DLGSFIRKHTITSIRPHIKEVGSPYKAP 152
++VRLL V++ G+ +V E + DL S++R S+RP + +P + P
Sbjct: 80 HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLR-----SLRPEAE--NNPGRPP 126
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 35.8 bits (81), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 57/114 (50%), Gaps = 14/114 (12%)
Query: 45 VVEKIGQGVFGEVYK-----CLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEH 99
++ ++GQG FG VY+ + E +VA+K +N +L S++K
Sbjct: 20 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNE-ASVMKGFTC 78
Query: 100 DNIVRLLDVLTTGRYVYLVFEYLDL-DLGSFIRKHTITSIRPHIKEVGSPYKAP 152
++VRLL V++ G+ +V E + DL S++R S+RP + +P + P
Sbjct: 79 HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLR-----SLRPEAE--NNPGRPP 125
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 37 KVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN-IQNEPEGVPSYLIAGVSLLK 95
++K +Y+VV+ IG+G FGEV + T K A+K+++ + ++ ++
Sbjct: 65 RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMA 124
Query: 96 ELEHDNIVRLLDVLTTGRYVYLVFEYL 122
+V+L RY+Y+V EY+
Sbjct: 125 FANSPWVVQLFYAFQDDRYLYMVMEYM 151
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 37 KVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN-IQNEPEGVPSYLIAGVSLLK 95
++K +Y+VV+ IG+G FGEV + T K A+K+++ + ++ ++
Sbjct: 70 RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMA 129
Query: 96 ELEHDNIVRLLDVLTTGRYVYLVFEYL 122
+V+L RY+Y+V EY+
Sbjct: 130 FANSPWVVQLFYAFQDDRYLYMVMEYM 156
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 57/114 (50%), Gaps = 14/114 (12%)
Query: 45 VVEKIGQGVFGEVYK-----CLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEH 99
++ ++GQG FG VY+ + E +VA+K +N +L S++K
Sbjct: 21 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEA-SVMKGFTC 79
Query: 100 DNIVRLLDVLTTGRYVYLVFEYLDL-DLGSFIRKHTITSIRPHIKEVGSPYKAP 152
++VRLL V++ G+ +V E + DL S++R S+RP + +P + P
Sbjct: 80 HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLR-----SLRPEAE--NNPGRPP 126
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 57/114 (50%), Gaps = 14/114 (12%)
Query: 45 VVEKIGQGVFGEVYK-----CLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEH 99
++ ++GQG FG VY+ + E +VA+K +N +L S++K
Sbjct: 22 LLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNE-ASVMKGFTC 80
Query: 100 DNIVRLLDVLTTGRYVYLVFEYLDL-DLGSFIRKHTITSIRPHIKEVGSPYKAP 152
++VRLL V++ G+ +V E + DL S++R S+RP + +P + P
Sbjct: 81 HHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLR-----SLRPEAE--NNPGRPP 127
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 35.8 bits (81), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 6/93 (6%)
Query: 48 KIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRLLD 107
K+GQG FGEV+ +VAIK + P + ++K+L H+ +V+L
Sbjct: 22 KLGQGCFGEVWMG-TWNGTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYA 77
Query: 108 VLTTGRYVYLVFEYLDL-DLGSFIRKHTITSIR 139
V++ +Y+V EY++ L F++ T +R
Sbjct: 78 VVSE-EPIYIVTEYMNKGSLLDFLKGETGKYLR 109
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 14/93 (15%)
Query: 123 DLDLGSFIRKHTITSIRPHIKEVGSPYKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKP 182
DL ++ KH I+ Y++ E I S Y+TP D+W+ C+ E+ +G
Sbjct: 239 DLGNACWVHKHFTEDIQTR------QYRSLEVLIGSG-YNTPADIWSTACMAFELATGDY 291
Query: 183 LFP-------CGKKDHLSLIVRYFTALTNYLVL 208
LF +DH++LI+ + L++
Sbjct: 292 LFEPHSGEEYTRDEDHIALIIELLGKVPRKLIV 324
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 45/75 (60%), Gaps = 6/75 (8%)
Query: 42 NYKVVEKIGQGVFGEVYKC-LNLETGK--KVAIKMI--NIQNEPEGVPSYLIAGVSLLKE 96
+ +++EK+G G FG V + + +GK VA+K + ++ ++PE + + I V+ +
Sbjct: 13 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDF-IREVNAMHS 71
Query: 97 LEHDNIVRLLDVLTT 111
L+H N++RL V+ T
Sbjct: 72 LDHRNLIRLYGVVLT 86
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 35.4 bits (80), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 45/75 (60%), Gaps = 6/75 (8%)
Query: 42 NYKVVEKIGQGVFGEVYKC-LNLETGK--KVAIKMI--NIQNEPEGVPSYLIAGVSLLKE 96
+ +++EK+G G FG V + + +GK VA+K + ++ ++PE + + I V+ +
Sbjct: 9 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDF-IREVNAMHS 67
Query: 97 LEHDNIVRLLDVLTT 111
L+H N++RL V+ T
Sbjct: 68 LDHRNLIRLYGVVLT 82
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 35.4 bits (80), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 8/94 (8%)
Query: 48 KIGQGVFGEVYKCLNLETG-KKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRLL 106
K+GQG FGEV+ + G +VAIK + P + ++K+L H+ +V+L
Sbjct: 22 KLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLY 76
Query: 107 DVLTTGRYVYLVFEYLDL-DLGSFIRKHTITSIR 139
V++ +Y+V EY++ L F++ T +R
Sbjct: 77 AVVSE-EPIYIVTEYMNKGSLLDFLKGETGKYLR 109
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 35.4 bits (80), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 45/75 (60%), Gaps = 6/75 (8%)
Query: 42 NYKVVEKIGQGVFGEVYKC-LNLETGK--KVAIKMI--NIQNEPEGVPSYLIAGVSLLKE 96
+ +++EK+G G FG V + + +GK VA+K + ++ ++PE + + I V+ +
Sbjct: 9 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDF-IREVNAMHS 67
Query: 97 LEHDNIVRLLDVLTT 111
L+H N++RL V+ T
Sbjct: 68 LDHRNLIRLYGVVLT 82
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 35.4 bits (80), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 45/75 (60%), Gaps = 6/75 (8%)
Query: 42 NYKVVEKIGQGVFGEVYKC-LNLETGK--KVAIKMI--NIQNEPEGVPSYLIAGVSLLKE 96
+ +++EK+G G FG V + + +GK VA+K + ++ ++PE + + I V+ +
Sbjct: 9 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDF-IREVNAMHS 67
Query: 97 LEHDNIVRLLDVLTT 111
L+H N++RL V+ T
Sbjct: 68 LDHRNLIRLYGVVLT 82
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 35.4 bits (80), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 47/107 (43%), Gaps = 4/107 (3%)
Query: 38 VKDWN-YKVVEKIGQGVFGEVYKCLNLETGKKV--AIKMINIQNEPEGVPSYLIAGVSLL 94
V DWN K + IG+G FG+V K + G ++ AIK + + + L
Sbjct: 11 VLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLC 70
Query: 95 KELEHDNIVRLLDVLTTGRYVYLVFEYLDL-DLGSFIRKHTITSIRP 140
K H NI+ LL Y+YL EY +L F+RK + P
Sbjct: 71 KLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDP 117
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 35.4 bits (80), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 56/113 (49%), Gaps = 13/113 (11%)
Query: 35 MEKVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLL 94
M++ +VE +G+G +GEV++ L G+ VA+K+ + ++E I LL
Sbjct: 2 MQRTVARQVALVECVGKGRYGEVWR--GLWHGESVAVKIFSSRDEQSWFRETEIYNTVLL 59
Query: 95 KELEHDNIVRLLDVLTTGR----YVYLVFEYLDL-DLGSFIRKHTITSIRPHI 142
+ HDNI+ + T R ++L+ Y + L F+++ T + PH+
Sbjct: 60 R---HDNILGFIASDMTSRNSSTQLWLITHYHEHGSLYDFLQRQT---LEPHL 106
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 35.4 bits (80), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 48 KIGQGVFGEVY-KCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRLL 106
K+GQG FGEV+ N T +VAIK + P + ++K+L H+ +V+L
Sbjct: 274 KLGQGCFGEVWMGTWNGTT--RVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLY 328
Query: 107 DVLTTGRYVYLVFEYLDL-DLGSFIRKHTITSIR 139
V++ +Y+V EY+ L F++ T +R
Sbjct: 329 AVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLR 361
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 35.4 bits (80), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 42/93 (45%), Gaps = 14/93 (15%)
Query: 123 DLDLGSFIRKHTITSIRPHIKEVGSPYKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKP 182
DL ++ KH I+ Y++ E I S Y+TP D+W+ C+ E+ +G
Sbjct: 223 DLGNACWVHKHFTEDIQTR------QYRSLEVLIGSG-YNTPADIWSTACMAFELATGDY 275
Query: 183 LFP-------CGKKDHLSLIVRYFTALTNYLVL 208
LF +DH++LI+ + L++
Sbjct: 276 LFEPHSGEEYTRDEDHIALIIELLGKVPRKLIV 308
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 35.4 bits (80), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 45/75 (60%), Gaps = 6/75 (8%)
Query: 42 NYKVVEKIGQGVFGEVYKC-LNLETGK--KVAIKMI--NIQNEPEGVPSYLIAGVSLLKE 96
+ +++EK+G G FG V + + +GK VA+K + ++ ++PE + + I V+ +
Sbjct: 19 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDF-IREVNAMHS 77
Query: 97 LEHDNIVRLLDVLTT 111
L+H N++RL V+ T
Sbjct: 78 LDHRNLIRLYGVVLT 92
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 35.4 bits (80), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 47/107 (43%), Gaps = 4/107 (3%)
Query: 38 VKDWN-YKVVEKIGQGVFGEVYKCLNLETGKKV--AIKMINIQNEPEGVPSYLIAGVSLL 94
V DWN K + IG+G FG+V K + G ++ AIK + + + L
Sbjct: 18 VLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLC 77
Query: 95 KELEHDNIVRLLDVLTTGRYVYLVFEYL-DLDLGSFIRKHTITSIRP 140
K H NI+ LL Y+YL EY +L F+RK + P
Sbjct: 78 KLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDP 124
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 35.4 bits (80), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 45/75 (60%), Gaps = 6/75 (8%)
Query: 42 NYKVVEKIGQGVFGEVYKC-LNLETGK--KVAIKMI--NIQNEPEGVPSYLIAGVSLLKE 96
+ +++EK+G G FG V + + +GK VA+K + ++ ++PE + + I V+ +
Sbjct: 19 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDF-IREVNAMHS 77
Query: 97 LEHDNIVRLLDVLTT 111
L+H N++RL V+ T
Sbjct: 78 LDHRNLIRLYGVVLT 92
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 35.4 bits (80), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y++V+ IG G FG + ++ + VA+K I E + + + + + L H NI
Sbjct: 21 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIE---RGEKIAANVKREIINHRSLRHPNI 77
Query: 103 VRLLDVLTTGRYVYLVFEY 121
VR +V+ T ++ +V EY
Sbjct: 78 VRFKEVILTPTHLAIVMEY 96
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 35.4 bits (80), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 57/118 (48%), Gaps = 10/118 (8%)
Query: 29 TNGSEQMEKVKDWNYKVVEKIGQGVFGEVYK-----CLNLETGKKVAIKMINIQNEPEGV 83
T+ +++V N ++ +G G FGEVY+ N + +VA+K + +
Sbjct: 19 TSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDE 78
Query: 84 PSYLIAGVSLLKELEHDNIVRLLDVLTTGRYVYLVFEYL-DLDLGSFIRKHTITSIRP 140
+L+ + ++ +L H NIVR + V +++ E + DL SF+R+ T RP
Sbjct: 79 LDFLMEAL-IISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE---TRPRP 132
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 35.4 bits (80), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 23/36 (63%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
Y+APE ++ ++ D+W+ GC+ AEM + K LF
Sbjct: 199 YRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALF 234
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 35.4 bits (80), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 48 KIGQGVFGEVYKCLNLETG-KKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRLL 106
K+GQG FGEV+ + G +VAIK + P + ++K+L H+ +V+L
Sbjct: 25 KLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLY 79
Query: 107 DVLTTGRYVYLVFEYL 122
V++ +Y+V EY+
Sbjct: 80 AVVSE-EPIYIVMEYM 94
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 35.4 bits (80), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 47/107 (43%), Gaps = 4/107 (3%)
Query: 38 VKDWN-YKVVEKIGQGVFGEVYKCLNLETGKKV--AIKMINIQNEPEGVPSYLIAGVSLL 94
V DWN K + IG+G FG+V K + G ++ AIK + + + L
Sbjct: 21 VLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLC 80
Query: 95 KELEHDNIVRLLDVLTTGRYVYLVFEYLDL-DLGSFIRKHTITSIRP 140
K H NI+ LL Y+YL EY +L F+RK + P
Sbjct: 81 KLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDP 127
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 35.4 bits (80), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 45/75 (60%), Gaps = 6/75 (8%)
Query: 42 NYKVVEKIGQGVFGEVYKC-LNLETGK--KVAIKMI--NIQNEPEGVPSYLIAGVSLLKE 96
+ +++EK+G G FG V + + +GK VA+K + ++ ++PE + + I V+ +
Sbjct: 13 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDF-IREVNAMHS 71
Query: 97 LEHDNIVRLLDVLTT 111
L+H N++RL V+ T
Sbjct: 72 LDHRNLIRLYGVVLT 86
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 35.4 bits (80), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 23/36 (63%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
Y+APE ++ ++ D+W+ GC+ AEM + K LF
Sbjct: 199 YRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALF 234
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 35.4 bits (80), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 57/118 (48%), Gaps = 10/118 (8%)
Query: 29 TNGSEQMEKVKDWNYKVVEKIGQGVFGEVYK-----CLNLETGKKVAIKMINIQNEPEGV 83
T+ +++V N ++ +G G FGEVY+ N + +VA+K + +
Sbjct: 33 TSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDE 92
Query: 84 PSYLIAGVSLLKELEHDNIVRLLDVLTTGRYVYLVFEYL-DLDLGSFIRKHTITSIRP 140
+L+ + ++ +L H NIVR + V +++ E + DL SF+R+ T RP
Sbjct: 93 LDFLMEAL-IISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE---TRPRP 146
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 35.4 bits (80), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 5/75 (6%)
Query: 48 KIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRLLD 107
K+GQG FGEV+ +VAIK + P + ++K+L H+ +V+L
Sbjct: 25 KLGQGCFGEVWMG-TWNGTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYA 80
Query: 108 VLTTGRYVYLVFEYL 122
V++ +Y+V EY+
Sbjct: 81 VVSE-EPIYIVIEYM 94
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 35.4 bits (80), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 5/75 (6%)
Query: 48 KIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRLLD 107
K+GQG FGEV+ +VAIK + P + ++K+L H+ +V+L
Sbjct: 25 KLGQGCFGEVWMG-TWNGTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYA 80
Query: 108 VLTTGRYVYLVFEYL 122
V++ +Y+V EY+
Sbjct: 81 VVSE-EPIYIVIEYM 94
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 35.0 bits (79), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 48/80 (60%), Gaps = 7/80 (8%)
Query: 44 KVVEKIGQGVFGEVY-KCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
K+ +K+G G FGEV+ N T KVA+K + + V ++L A +++K L+HD +
Sbjct: 185 KLEKKLGAGQFGEVWMATYNKHT--KVAVKTMKPGS--MSVEAFL-AEANVMKTLQHDKL 239
Query: 103 VRLLDVLTTGRYVYLVFEYL 122
V+L V+T +Y++ E++
Sbjct: 240 VKLHAVVTK-EPIYIITEFM 258
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 35.0 bits (79), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 43 YKVVEKI-GQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELE-HD 100
Y++ E + G+G V C+NL T ++ A+K+ I+ +P + S + V +L + + H
Sbjct: 14 YQLQEDVLGEGAHARVQTCINLITSQEYAVKI--IEKQPGHIRSRVFREVEMLYQCQGHR 71
Query: 101 NIVRLLDVLTTGRYVYLVFEYL 122
N++ L++ YLVFE +
Sbjct: 72 NVLELIEFFEEEDRFYLVFEKM 93
Score = 27.3 bits (59), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 8/70 (11%)
Query: 123 DLDLGSFIRKH---TITSIRPHIKEVGSP-YKAPES----RIRSSVYSTPHDVWAVGCIF 174
D DLGS I+ + + S + GS Y APE +S+Y D+W++G I
Sbjct: 157 DFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVIL 216
Query: 175 AEMVSGKPLF 184
++SG P F
Sbjct: 217 YILLSGYPPF 226
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 35.0 bits (79), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Query: 31 GSEQMEKVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAG 90
G+ ++K ++K +E IG G FG+V+K + GK IK + NE
Sbjct: 1 GAHTVDKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAERE------ 54
Query: 91 VSLLKELEHDNIV 103
V L +L+H NIV
Sbjct: 55 VKALAKLDHVNIV 67
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 35.0 bits (79), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 48/80 (60%), Gaps = 7/80 (8%)
Query: 44 KVVEKIGQGVFGEVY-KCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
K+ +K+G G FGEV+ N T KVA+K + + V ++L A +++K L+HD +
Sbjct: 191 KLEKKLGAGQFGEVWMATYNKHT--KVAVKTMKPGS--MSVEAFL-AEANVMKTLQHDKL 245
Query: 103 VRLLDVLTTGRYVYLVFEYL 122
V+L V+T +Y++ E++
Sbjct: 246 VKLHAVVTK-EPIYIITEFM 264
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 35.0 bits (79), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 43 YKVVEKI-GQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELE-HD 100
Y++ E + G+G V C+NL T ++ A+K+ I+ +P + S + V +L + + H
Sbjct: 14 YQLQEDVLGEGAHARVQTCINLITSQEYAVKI--IEKQPGHIRSRVFREVEMLYQCQGHR 71
Query: 101 NIVRLLDVLTTGRYVYLVFEYL 122
N++ L++ YLVFE +
Sbjct: 72 NVLELIEFFEEEDRFYLVFEKM 93
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 35.0 bits (79), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 48 KIGQGVFGEVYKCLNLETG-KKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRLL 106
K+GQG FGEV+ + G +VAIK + P + ++K+L H+ +V+L
Sbjct: 18 KLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLY 72
Query: 107 DVLTTGRYVYLVFEYLDL-DLGSFIRKHTITSIR 139
V++ +Y+V EY+ L F++ T +R
Sbjct: 73 AVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLR 105
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 35.0 bits (79), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 18/141 (12%)
Query: 44 KVVEKIGQGVFGEVYKCLNL-----ETGKKVAIKMINIQNEPEGVPSYLIAGVSLLK-EL 97
+ +E++G+ FG+VYK E + VAIK ++++ EG ++L+ L
Sbjct: 29 RFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIK--TLKDKAEGPLREEFRHEAMLRARL 86
Query: 98 EHDNIVRLLDVLTTGRYVYLVFEYLDL-DLGSFIRKHTITSIRPHIKEVGSPYKAPESRI 156
+H N+V LL V+T + + ++F Y DL F+ + PH +VGS + R
Sbjct: 87 QHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRS-----PH-SDVGS---TDDDRT 137
Query: 157 RSSVYSTPHDVWAVGCIFAEM 177
S P V V I A M
Sbjct: 138 VKSALEPPDFVHLVAQIAAGM 158
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 35.0 bits (79), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 44 KVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIV 103
K+ +K+G G FGEV+ KVA+K + + V ++L A +++K L+HD +V
Sbjct: 18 KLEKKLGAGQFGEVWMA-TYNKHTKVAVKTMKPGS--MSVEAFL-AEANVMKTLQHDKLV 73
Query: 104 RLLDVLTTGRYVYLVFEYL 122
+L V+T +Y++ E++
Sbjct: 74 KLHAVVTK-EPIYIITEFM 91
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 35.0 bits (79), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 7/79 (8%)
Query: 49 IGQGVFGEVYKCLNLETGK-----KVAIKMINIQNEPEGVPSYLIAGVSLLKEL-EHDNI 102
+G G FG+V K +VA+KM+ + + + L++ + ++ +L H+NI
Sbjct: 53 LGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREA-LMSELKMMTQLGSHENI 111
Query: 103 VRLLDVLTTGRYVYLVFEY 121
V LL T +YL+FEY
Sbjct: 112 VNLLGACTLSGPIYLIFEY 130
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 35.0 bits (79), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 23/31 (74%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKM 73
Y++ KIG G FG++Y N+ +G++VAIK+
Sbjct: 11 YRLGRKIGSGSFGDIYLGANIASGEEVAIKL 41
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 34.7 bits (78), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 48 KIGQGVFGEVYKCLNLETG-KKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRLL 106
K+GQG FGEV+ + G +VAIK + P + ++K+L H+ +V+L
Sbjct: 191 KLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEKLVQLY 245
Query: 107 DVLTTGRYVYLVFEYLDL-DLGSFIRKHTITSIR 139
V++ +Y+V EY+ L F++ T +R
Sbjct: 246 AVVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLR 278
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 34.7 bits (78), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
Query: 48 KIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRLLD 107
K+GQG FGEV+ +VAIK + P + ++K+L H+ +V+L
Sbjct: 191 KLGQGCFGEVWMG-TWNGTTRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEKLVQLYA 246
Query: 108 VLTTGRYVYLVFEYLDL-DLGSFIRKHTITSIR 139
V++ +Y+V EY+ L F++ T +R
Sbjct: 247 VVSE-EPIYIVTEYMSKGSLLDFLKGETGKYLR 278
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 34.7 bits (78), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 18/141 (12%)
Query: 44 KVVEKIGQGVFGEVYKCLNL-----ETGKKVAIKMINIQNEPEGVPSYLIAGVSLLK-EL 97
+ +E++G+ FG+VYK E + VAIK ++++ EG ++L+ L
Sbjct: 12 RFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIK--TLKDKAEGPLREEFRHEAMLRARL 69
Query: 98 EHDNIVRLLDVLTTGRYVYLVFEYLDL-DLGSFIRKHTITSIRPHIKEVGSPYKAPESRI 156
+H N+V LL V+T + + ++F Y DL F+ + PH +VGS + R
Sbjct: 70 QHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRS-----PH-SDVGS---TDDDRT 120
Query: 157 RSSVYSTPHDVWAVGCIFAEM 177
S P V V I A M
Sbjct: 121 VKSALEPPDFVHLVAQIAAGM 141
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 34.7 bits (78), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 7/88 (7%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN-----IQNEPEGVPSYLI-AGVSLLK 95
Y + + +G G GEV +T KKVAIK+I+ I + E P+ + + +LK
Sbjct: 11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILK 70
Query: 96 ELEHDNIVRLLDVLTTGRYVYLVFEYLD 123
+L H I+++ + Y Y+V E ++
Sbjct: 71 KLNHPCIIKIKNFFDAEDY-YIVLELME 97
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 34.7 bits (78), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 7/88 (7%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN-----IQNEPEGVPSYLI-AGVSLLK 95
Y + + +G G GEV +T KKVAIK+I+ I + E P+ + + +LK
Sbjct: 11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILK 70
Query: 96 ELEHDNIVRLLDVLTTGRYVYLVFEYLD 123
+L H I+++ + Y Y+V E ++
Sbjct: 71 KLNHPCIIKIKNFFDAEDY-YIVLELME 97
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 34.7 bits (78), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 7/88 (7%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN-----IQNEPEGVPSYLI-AGVSLLK 95
Y + + +G G GEV +T KKVAIK+I+ I + E P+ + + +LK
Sbjct: 11 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILK 70
Query: 96 ELEHDNIVRLLDVLTTGRYVYLVFEYLD 123
+L H I+++ + Y Y+V E ++
Sbjct: 71 KLNHPCIIKIKNFFDAEDY-YIVLELME 97
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 34.7 bits (78), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 48 KIGQGVFGEVYKCLNLETG-KKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRLL 106
K+GQG FGEV+ + G +VAIK + P + ++K+L H+ +V+L
Sbjct: 25 KLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLY 79
Query: 107 DVLTTGRYVYLVFEYL 122
V++ +Y+V EY+
Sbjct: 80 AVVSE-EPIYIVCEYM 94
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 34.7 bits (78), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y++V+ IG G FG + ++ + VA+K I E + + + + L H NI
Sbjct: 20 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIE---RGEKIDENVKREIINHRSLRHPNI 76
Query: 103 VRLLDVLTTGRYVYLVFEY 121
VR +V+ T ++ +V EY
Sbjct: 77 VRFKEVILTPTHLAIVMEY 95
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 34.7 bits (78), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y++V+ IG G FG + ++ + VA+K I E + + + + L H NI
Sbjct: 21 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIE---RGEKIDENVKREIINHRSLRHPNI 77
Query: 103 VRLLDVLTTGRYVYLVFEY 121
VR +V+ T ++ +V EY
Sbjct: 78 VRFKEVILTPTHLAIVMEY 96
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 34.7 bits (78), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 5/75 (6%)
Query: 48 KIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRLLD 107
K+GQG FGEV+ +VAIK + P + ++K+L H+ +V+L
Sbjct: 25 KLGQGCFGEVWMG-TWNGTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYA 80
Query: 108 VLTTGRYVYLVFEYL 122
V++ +Y+V EY+
Sbjct: 81 VVSE-EPIYIVTEYM 94
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 34.7 bits (78), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 7/88 (7%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN-----IQNEPEGVPSYLI-AGVSLLK 95
Y + + +G G GEV +T KKVAIK+I+ I + E P+ + + +LK
Sbjct: 17 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILK 76
Query: 96 ELEHDNIVRLLDVLTTGRYVYLVFEYLD 123
+L H I+++ + Y Y+V E ++
Sbjct: 77 KLNHPCIIKIKNFFDAEDY-YIVLELME 103
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 34.7 bits (78), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 48 KIGQGVFGEVYKCLNLETG-KKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRLL 106
K+GQG FGEV+ + G +VAIK + P + ++K+L H+ +V+L
Sbjct: 25 KLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLY 79
Query: 107 DVLTTGRYVYLVFEYL 122
V++ +Y+V EY+
Sbjct: 80 AVVSE-EPIYIVTEYM 94
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 34.7 bits (78), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 48 KIGQGVFGEVYKCLNLETG-KKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRLL 106
K+GQG FGEV+ + G +VAIK + P + ++K+L H+ +V+L
Sbjct: 14 KLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLY 68
Query: 107 DVLTTGRYVYLVFEYL 122
V++ +Y+V EY+
Sbjct: 69 AVVSE-EPIYIVTEYM 83
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 34.7 bits (78), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y++V+ IG G FG + ++ + VA+K I E + + + + L H NI
Sbjct: 21 YELVKDIGSGNFGVARLMRDKQSNELVAVKYIE---RGEKIDENVKREIINHRSLRHPNI 77
Query: 103 VRLLDVLTTGRYVYLVFEY 121
VR +V+ T ++ +V EY
Sbjct: 78 VRFKEVILTPTHLAIVMEY 96
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 34.7 bits (78), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 48 KIGQGVFGEVYKCLNLETG-KKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRLL 106
K+GQG FGEV+ + G +VAIK + P + ++K+L H+ +V+L
Sbjct: 16 KLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLY 70
Query: 107 DVLTTGRYVYLVFEYL 122
V++ +Y+V EY+
Sbjct: 71 AVVSE-EPIYIVTEYM 85
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 34.7 bits (78), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 5/75 (6%)
Query: 48 KIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRLLD 107
K+GQG FGEV+ +VAIK + P + ++K+L H+ +V+L
Sbjct: 25 KLGQGCFGEVWMG-TWNGTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYA 80
Query: 108 VLTTGRYVYLVFEYL 122
V++ +Y+V EY+
Sbjct: 81 VVSE-EPIYIVTEYM 94
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 34.7 bits (78), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 45/88 (51%), Gaps = 7/88 (7%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN-----IQNEPEGVPSYLI-AGVSLLK 95
Y + + +G G GEV +T KKVAIK+I+ I + E P+ + + +LK
Sbjct: 10 EYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILK 69
Query: 96 ELEHDNIVRLLDVLTTGRYVYLVFEYLD 123
+L H I+++ + Y Y+V E ++
Sbjct: 70 KLNHPCIIKIKNFFDAEDY-YIVLELME 96
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 34.7 bits (78), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 48/94 (51%), Gaps = 8/94 (8%)
Query: 48 KIGQGVFGEVYKCLNLETG-KKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRLL 106
K+GQG FGEV+ + G +VAIK + P + ++K+L H+ +V+L
Sbjct: 191 KLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEKLVQLY 245
Query: 107 DVLTTGRYVYLVFEYLDL-DLGSFIRKHTITSIR 139
V++ +Y+V EY+ L F++ T +R
Sbjct: 246 AVVSE-EPIYIVGEYMSKGSLLDFLKGETGKYLR 278
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 34.7 bits (78), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
+Y + E++G G FG V++ TG A K + +E + + + + L H
Sbjct: 52 HYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDK--ETVRKEIQTMSVLRHPT 109
Query: 102 IVRLLDVLTTGRYVYLVFEYL 122
+V L D + +++E++
Sbjct: 110 LVNLHDAFEDDNEMVMIYEFM 130
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 34.3 bits (77), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN 75
++ V IG+G FGEVY C +TGK A+K ++
Sbjct: 189 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLD 222
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 34.3 bits (77), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN 75
++ V IG+G FGEVY C +TGK A+K ++
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLD 223
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 34.3 bits (77), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 56/118 (47%), Gaps = 10/118 (8%)
Query: 29 TNGSEQMEKVKDWNYKVVEKIGQGVFGEVYK-----CLNLETGKKVAIKMINIQNEPEGV 83
T+ +++V N ++ +G G FGEVY+ N + +VA+K + +
Sbjct: 10 TSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDE 69
Query: 84 PSYLIAGVSLLKELEHDNIVRLLDVLTTGRYVYLVFEYL-DLDLGSFIRKHTITSIRP 140
+L+ + ++ + H NIVR + V +++ E + DL SF+R+ T RP
Sbjct: 70 LDFLMEAL-IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE---TRPRP 123
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 34.3 bits (77), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN 75
++ V IG+G FGEVY C +TGK A+K ++
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLD 223
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 34.3 bits (77), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
+Y + E++G G FG V++ TG A K + +E + + + + L H
Sbjct: 158 HYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDK--ETVRKEIQTMSVLRHPT 215
Query: 102 IVRLLDVLTTGRYVYLVFEYL 122
+V L D + +++E++
Sbjct: 216 LVNLHDAFEDDNEMVMIYEFM 236
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 34.3 bits (77), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 22/34 (64%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN 75
++ V IG+G FGEVY C +TGK A+K ++
Sbjct: 190 DFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLD 223
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 34.3 bits (77), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 56/118 (47%), Gaps = 10/118 (8%)
Query: 29 TNGSEQMEKVKDWNYKVVEKIGQGVFGEVYK-----CLNLETGKKVAIKMINIQNEPEGV 83
T+ +++V N ++ +G G FGEVY+ N + +VA+K + +
Sbjct: 19 TSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDE 78
Query: 84 PSYLIAGVSLLKELEHDNIVRLLDVLTTGRYVYLVFEYL-DLDLGSFIRKHTITSIRP 140
+L+ + ++ + H NIVR + V +++ E + DL SF+R+ T RP
Sbjct: 79 LDFLMEAL-IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE---TRPRP 132
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 34.3 bits (77), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 56/118 (47%), Gaps = 10/118 (8%)
Query: 29 TNGSEQMEKVKDWNYKVVEKIGQGVFGEVYK-----CLNLETGKKVAIKMINIQNEPEGV 83
T+ +++V N ++ +G G FGEVY+ N + +VA+K + +
Sbjct: 18 TSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDE 77
Query: 84 PSYLIAGVSLLKELEHDNIVRLLDVLTTGRYVYLVFEYL-DLDLGSFIRKHTITSIRP 140
+L+ + ++ + H NIVR + V +++ E + DL SF+R+ T RP
Sbjct: 78 LDFLMEAL-IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE---TRPRP 131
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 34.3 bits (77), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 56/118 (47%), Gaps = 10/118 (8%)
Query: 29 TNGSEQMEKVKDWNYKVVEKIGQGVFGEVYK-----CLNLETGKKVAIKMINIQNEPEGV 83
T+ +++V N ++ +G G FGEVY+ N + +VA+K + +
Sbjct: 19 TSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDE 78
Query: 84 PSYLIAGVSLLKELEHDNIVRLLDVLTTGRYVYLVFEYL-DLDLGSFIRKHTITSIRP 140
+L+ + ++ + H NIVR + V +++ E + DL SF+R+ T RP
Sbjct: 79 LDFLMEAL-IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE---TRPRP 132
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 34.3 bits (77), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 41/93 (44%), Gaps = 14/93 (15%)
Query: 123 DLDLGSFIRKHTITSIRPHIKEVGSPYKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKP 182
DL ++ KH I+ Y++ E I + YSTP D+W+ C+ E+ +G
Sbjct: 231 DLGNACWVHKHFTEDIQT------RQYRSIEVLIGAG-YSTPADIWSTACMAFELATGDY 283
Query: 183 LFP-------CGKKDHLSLIVRYFTALTNYLVL 208
LF +DH++ I+ ++ + L
Sbjct: 284 LFEPHSGEDYSRDEDHIAHIIELLGSIPRHFAL 316
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 34.3 bits (77), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 56/118 (47%), Gaps = 10/118 (8%)
Query: 29 TNGSEQMEKVKDWNYKVVEKIGQGVFGEVYK-----CLNLETGKKVAIKMINIQNEPEGV 83
T+ +++V N ++ +G G FGEVY+ N + +VA+K + +
Sbjct: 25 TSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDE 84
Query: 84 PSYLIAGVSLLKELEHDNIVRLLDVLTTGRYVYLVFEYL-DLDLGSFIRKHTITSIRP 140
+L+ + ++ + H NIVR + V +++ E + DL SF+R+ T RP
Sbjct: 85 LDFLMEAL-IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE---TRPRP 138
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 33.9 bits (76), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 56/118 (47%), Gaps = 10/118 (8%)
Query: 29 TNGSEQMEKVKDWNYKVVEKIGQGVFGEVYK-----CLNLETGKKVAIKMINIQNEPEGV 83
T+ +++V N ++ +G G FGEVY+ N + +VA+K + +
Sbjct: 45 TSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDE 104
Query: 84 PSYLIAGVSLLKELEHDNIVRLLDVLTTGRYVYLVFEYL-DLDLGSFIRKHTITSIRP 140
+L+ + ++ + H NIVR + V +++ E + DL SF+R+ T RP
Sbjct: 105 LDFLMEAL-IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE---TRPRP 158
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 33.9 bits (76), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
Y++V+ IG G FG + + + VA+K I E + + + + L H NI
Sbjct: 21 YELVKDIGAGNFGVARLMRDKQANELVAVKYIE---RGEKIDENVKREIINHRSLRHPNI 77
Query: 103 VRLLDVLTTGRYVYLVFEY 121
VR +V+ T ++ +V EY
Sbjct: 78 VRFKEVILTPTHLAIVMEY 96
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 33.9 bits (76), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 56/118 (47%), Gaps = 10/118 (8%)
Query: 29 TNGSEQMEKVKDWNYKVVEKIGQGVFGEVYK-----CLNLETGKKVAIKMINIQNEPEGV 83
T+ +++V N ++ +G G FGEVY+ N + +VA+K + +
Sbjct: 18 TSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDE 77
Query: 84 PSYLIAGVSLLKELEHDNIVRLLDVLTTGRYVYLVFEYL-DLDLGSFIRKHTITSIRP 140
+L+ + ++ + H NIVR + V +++ E + DL SF+R+ T RP
Sbjct: 78 LDFLMEAL-IISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRE---TRPRP 131
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 33.9 bits (76), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 56/118 (47%), Gaps = 10/118 (8%)
Query: 29 TNGSEQMEKVKDWNYKVVEKIGQGVFGEVYK-----CLNLETGKKVAIKMINIQNEPEGV 83
T+ +++V N ++ +G G FGEVY+ N + +VA+K + +
Sbjct: 59 TSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDE 118
Query: 84 PSYLIAGVSLLKELEHDNIVRLLDVLTTGRYVYLVFEYL-DLDLGSFIRKHTITSIRP 140
+L+ + ++ + H NIVR + V +++ E + DL SF+R+ T RP
Sbjct: 119 LDFLMEAL-IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE---TRPRP 172
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 33.9 bits (76), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 56/118 (47%), Gaps = 10/118 (8%)
Query: 29 TNGSEQMEKVKDWNYKVVEKIGQGVFGEVYK-----CLNLETGKKVAIKMINIQNEPEGV 83
T+ +++V N ++ +G G FGEVY+ N + +VA+K + +
Sbjct: 35 TSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDE 94
Query: 84 PSYLIAGVSLLKELEHDNIVRLLDVLTTGRYVYLVFEYL-DLDLGSFIRKHTITSIRP 140
+L+ + ++ + H NIVR + V +++ E + DL SF+R+ T RP
Sbjct: 95 LDFLMEAL-IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE---TRPRP 148
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 33.9 bits (76), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 56/118 (47%), Gaps = 10/118 (8%)
Query: 29 TNGSEQMEKVKDWNYKVVEKIGQGVFGEVYK-----CLNLETGKKVAIKMINIQNEPEGV 83
T+ +++V N ++ +G G FGEVY+ N + +VA+K + +
Sbjct: 36 TSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDE 95
Query: 84 PSYLIAGVSLLKELEHDNIVRLLDVLTTGRYVYLVFEYL-DLDLGSFIRKHTITSIRP 140
+L+ + ++ + H NIVR + V +++ E + DL SF+R+ T RP
Sbjct: 96 LDFLMEAL-IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE---TRPRP 149
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 33.9 bits (76), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 56/118 (47%), Gaps = 10/118 (8%)
Query: 29 TNGSEQMEKVKDWNYKVVEKIGQGVFGEVYK-----CLNLETGKKVAIKMINIQNEPEGV 83
T+ +++V N ++ +G G FGEVY+ N + +VA+K + +
Sbjct: 33 TSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDE 92
Query: 84 PSYLIAGVSLLKELEHDNIVRLLDVLTTGRYVYLVFEYL-DLDLGSFIRKHTITSIRP 140
+L+ + ++ + H NIVR + V +++ E + DL SF+R+ T RP
Sbjct: 93 LDFLMEAL-IISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRE---TRPRP 146
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 33.9 bits (76), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 38 VKDWNYKVVEKIGQGVFGEVYKCLNLETGKK----VAIKMINIQNEPEGVPSYLIAGVSL 93
+K+ +K ++ +G G FG VYK L + G+K VAIK + P+ L +
Sbjct: 16 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY-V 74
Query: 94 LKELEHDNIVRLLDVLTTGRYVYLVFEYLDLD-LGSFIRKH 133
+ +++ ++ RLL + T V L+ + + L ++R+H
Sbjct: 75 MASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREH 114
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 33.9 bits (76), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 38 VKDWNYKVVEKIGQGVFGEVYKCLNLETGKK----VAIKMINIQNEPEGVPSYLIAGVSL 93
+K+ +K ++ +G G FG VYK L + G+K VAIK + P+ L +
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY-V 72
Query: 94 LKELEHDNIVRLLDVLTTGRYVYLVFEYLDLD-LGSFIRKH 133
+ +++ ++ RLL + T V L+ + + L ++R+H
Sbjct: 73 MASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREH 112
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 33.9 bits (76), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 38 VKDWNYKVVEKIGQGVFGEVYKCLNLETGKK----VAIKMINIQNEPEGVPSYLIAGVSL 93
+K+ +K ++ +G G FG VYK L + G+K VAIK + P+ L +
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY-V 72
Query: 94 LKELEHDNIVRLLDVLTTGRYVYLVFEYLDLD-LGSFIRKH 133
+ +++ ++ RLL + T V L+ + + L ++R+H
Sbjct: 73 MASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREH 112
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 33.9 bits (76), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 38 VKDWNYKVVEKIGQGVFGEVYKCLNLETGKK----VAIKMINIQNEPEGVPSYLIAGVSL 93
+K+ +K ++ +G G FG VYK L + G+K VAIK + P+ L +
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY-V 72
Query: 94 LKELEHDNIVRLLDVLTTGRYVYLVFEYLDLD-LGSFIRKH 133
+ +++ ++ RLL + T V L+ + + L ++R+H
Sbjct: 73 MASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREH 112
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 33.9 bits (76), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 38 VKDWNYKVVEKIGQGVFGEVYKCLNLETGKK----VAIKMINIQNEPEGVPSYLIAGVSL 93
+K+ +K ++ +G G FG VYK L + G+K VAIK + P+ L +
Sbjct: 16 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY-V 74
Query: 94 LKELEHDNIVRLLDVLTTGRYVYLVFEYLDLD-LGSFIRKH 133
+ +++ ++ RLL + T V L+ + + L ++R+H
Sbjct: 75 MASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREH 114
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 33.9 bits (76), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 38 VKDWNYKVVEKIGQGVFGEVYKCLNLETGKK----VAIKMINIQNEPEGVPSYLIAGVSL 93
+K+ +K ++ +G G FG VYK L + G+K VAIK + P+ L +
Sbjct: 13 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY-V 71
Query: 94 LKELEHDNIVRLLDVLTTGRYVYLVFEYLDLD-LGSFIRKH 133
+ +++ ++ RLL + T V L+ + + L ++R+H
Sbjct: 72 MASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREH 111
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 33.9 bits (76), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 38 VKDWNYKVVEKIGQGVFGEVYKCLNLETGKK----VAIKMINIQNEPEGVPSYLIAGVSL 93
+K+ +K ++ +G G FG VYK L + G+K VAIK + P+ L +
Sbjct: 15 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY-V 73
Query: 94 LKELEHDNIVRLLDVLTTGRYVYLVFEYLDLD-LGSFIRKH 133
+ +++ ++ RLL + T V L+ + + L ++R+H
Sbjct: 74 MASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREH 113
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 33.9 bits (76), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 38 VKDWNYKVVEKIGQGVFGEVYKCLNLETGKK----VAIKMINIQNEPEGVPSYLIAGVSL 93
+K+ +K ++ +G G FG VYK L + G+K VAIK + P+ L +
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY-V 70
Query: 94 LKELEHDNIVRLLDVLTTGRYVYLVFEYLDLD-LGSFIRKH 133
+ +++ ++ RLL + T V L+ + + L ++R+H
Sbjct: 71 MASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREH 110
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 33.9 bits (76), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
+++ + +GQG FG+V K N + AIK I E S +++ V LL L H
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKI---RHTEEKLSTILSEVXLLASLNHQY 63
Query: 102 IVR 104
+VR
Sbjct: 64 VVR 66
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 33.9 bits (76), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 56/118 (47%), Gaps = 10/118 (8%)
Query: 29 TNGSEQMEKVKDWNYKVVEKIGQGVFGEVYK-----CLNLETGKKVAIKMINIQNEPEGV 83
T+ +++V N ++ +G G FGEVY+ N + +VA+K + +
Sbjct: 33 TSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDE 92
Query: 84 PSYLIAGVSLLKELEHDNIVRLLDVLTTGRYVYLVFEYL-DLDLGSFIRKHTITSIRP 140
+L+ + ++ + H NIVR + V +++ E + DL SF+R+ T RP
Sbjct: 93 LDFLMEAL-IISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRE---TRPRP 146
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 33.9 bits (76), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN-----IQNEPEGVPSYLI-AGVSLLKE 96
Y + + +G G GEV +T KKVAI++I+ I + E P+ + + +LK+
Sbjct: 151 YIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKK 210
Query: 97 LEHDNIVRLLDVLTTGRYVYLVFEYLD 123
L H I+++ + Y Y+V E ++
Sbjct: 211 LNHPCIIKIKNFFDAEDY-YIVLELME 236
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 33.9 bits (76), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN-----IQNEPEGVPSYLI-AGVSLLKE 96
Y + + +G G GEV +T KKVAI++I+ I + E P+ + + +LK+
Sbjct: 137 YIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKK 196
Query: 97 LEHDNIVRLLDVLTTGRYVYLVFEYLD 123
L H I+++ + Y Y+V E ++
Sbjct: 197 LNHPCIIKIKNFFDAEDY-YIVLELME 222
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 33.9 bits (76), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 38 VKDWNYKVVEKIGQGVFGEVYKCLNLETGKK----VAIKMINIQNEPEGVPSYLIAGVSL 93
+K+ +K ++ +G G FG VYK L + G+K VAIK + P+ L +
Sbjct: 13 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY-V 71
Query: 94 LKELEHDNIVRLLDVLTTGRYVYLVFEYLDLD-LGSFIRKH 133
+ +++ ++ RLL + T V L+ + + L ++R+H
Sbjct: 72 MASVDNPHVCRLLGICLTST-VQLIMQLMPFGXLLDYVREH 111
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 33.5 bits (75), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 5/75 (6%)
Query: 48 KIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRLLD 107
K+GQG FGEV+ +VAIK + P + ++K++ H+ +V+L
Sbjct: 25 KLGQGCFGEVWMG-TWNGTTRVAIKTLKPGTM---SPEAFLQEAQVMKKIRHEKLVQLYA 80
Query: 108 VLTTGRYVYLVFEYL 122
V++ +Y+V EY+
Sbjct: 81 VVSE-EPIYIVTEYM 94
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 33.5 bits (75), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
+++ + +GQG FG+V K N + AIK I E S +++ V LL L H
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKI---RHTEEKLSTILSEVMLLASLNHQY 63
Query: 102 IVR 104
+VR
Sbjct: 64 VVR 66
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 33.5 bits (75), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
+++ + +GQG FG+V K N + AIK I E S +++ V LL L H
Sbjct: 7 DFEEIAVLGQGAFGQVVKARNALDSRYYAIKKI---RHTEEKLSTILSEVMLLASLNHQY 63
Query: 102 IVR 104
+VR
Sbjct: 64 VVR 66
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 33.5 bits (75), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 49/84 (58%), Gaps = 6/84 (7%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNE---PEGVPSYLIAGVSLLKELEH 99
Y + + +G+G +G+V + L+ ET + A+K++ + P G + + + LL+ L H
Sbjct: 7 YLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGE-ANVKKEIQLLRRLRH 65
Query: 100 DNIVRLLDVL--TTGRYVYLVFEY 121
N+++L+DVL + +Y+V EY
Sbjct: 66 KNVIQLVDVLYNEEKQKMYMVMEY 89
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 33.5 bits (75), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 25/47 (53%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLI 195
+K PE + +Y D+W++GC+ A M+ K F G ++ L+
Sbjct: 197 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
Score = 26.9 bits (58), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 8/26 (30%), Positives = 19/26 (73%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGK 67
+Y++V K+G+G + EV++ +N+ +
Sbjct: 38 DYQLVRKLGRGKYSEVFEAINITNNE 63
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 33.5 bits (75), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 49 IGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRLLDV 108
+G+G +G VY +L ++AIK I ++ P L ++L K L+H NIV+ L
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQP--LHEEIALHKHLKHKNIVQYLGS 87
Query: 109 LTTGRYVYLVFE 120
+ ++ + E
Sbjct: 88 FSENGFIKIFME 99
Score = 33.5 bits (75), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 161 YSTPHDVWAVGCIFAEMVSGKPLF 184
Y D+W++GC EM +GKP F
Sbjct: 202 YGKAADIWSLGCTIIEMATGKPPF 225
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 33.5 bits (75), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 25/47 (53%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLI 195
+K PE + +Y D+W++GC+ A M+ K F G ++ L+
Sbjct: 195 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 241
Score = 26.9 bits (58), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 8/26 (30%), Positives = 19/26 (73%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGK 67
+Y++V K+G+G + EV++ +N+ +
Sbjct: 36 DYQLVRKLGRGKYSEVFEAINITNNE 61
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 33.5 bits (75), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 25/47 (53%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLI 195
+K PE + +Y D+W++GC+ A M+ K F G ++ L+
Sbjct: 197 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
Score = 27.3 bits (59), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 8/26 (30%), Positives = 19/26 (73%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGK 67
+Y++V K+G+G + EV++ +N+ +
Sbjct: 38 DYQLVRKLGRGKYSEVFEAINITNNE 63
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 33.5 bits (75), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 25/47 (53%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLI 195
+K PE + +Y D+W++GC+ A M+ K F G ++ L+
Sbjct: 197 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
Score = 26.9 bits (58), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 8/26 (30%), Positives = 19/26 (73%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGK 67
+Y++V K+G+G + EV++ +N+ +
Sbjct: 38 DYQLVRKLGRGKYSEVFEAINITNNE 63
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 33.5 bits (75), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 6/62 (9%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
++K +E IG G FG+V+K + GK I+ + NE V L +L+H N
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAERE------VKALAKLDHVN 66
Query: 102 IV 103
IV
Sbjct: 67 IV 68
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 33.5 bits (75), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 25/47 (53%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLI 195
+K PE + +Y D+W++GC+ A M+ K F G ++ L+
Sbjct: 197 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
Score = 27.3 bits (59), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 8/26 (30%), Positives = 19/26 (73%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGK 67
+Y++V K+G+G + EV++ +N+ +
Sbjct: 38 DYQLVRKLGRGKYSEVFEAINITNNE 63
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 33.5 bits (75), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 25/47 (53%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLI 195
+K PE + +Y D+W++GC+ A M+ K F G ++ L+
Sbjct: 196 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 242
Score = 26.9 bits (58), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 8/26 (30%), Positives = 19/26 (73%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGK 67
+Y++V K+G+G + EV++ +N+ +
Sbjct: 37 DYQLVRKLGRGKYSEVFEAINITNNE 62
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 33.5 bits (75), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 25/47 (53%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLI 195
+K PE + +Y D+W++GC+ A M+ K F G ++ L+
Sbjct: 196 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 242
Score = 26.9 bits (58), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 8/26 (30%), Positives = 19/26 (73%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGK 67
+Y++V K+G+G + EV++ +N+ +
Sbjct: 37 DYQLVRKLGRGKYSEVFEAINITNNE 62
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 33.5 bits (75), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 25/47 (53%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLI 195
+K PE + +Y D+W++GC+ A M+ K F G ++ L+
Sbjct: 197 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
Score = 27.3 bits (59), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 8/26 (30%), Positives = 19/26 (73%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGK 67
+Y++V K+G+G + EV++ +N+ +
Sbjct: 38 DYQLVRKLGRGKYSEVFEAINITNNE 63
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 33.5 bits (75), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Query: 149 YKAPESRIRSSV-YSTPHDVWAVGCIFAEMVSGKPLF 184
Y APE + Y D+W++GC EM +GKP F
Sbjct: 175 YMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF 211
Score = 33.5 bits (75), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 49 IGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRLLDV 108
+G+G +G VY +L ++AIK I ++ P L ++L K L+H NIV+ L
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQP--LHEEIALHKHLKHKNIVQYLGS 73
Query: 109 LTTGRYVYLVFE 120
+ ++ + E
Sbjct: 74 FSENGFIKIFME 85
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 33.5 bits (75), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 25/47 (53%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLI 195
+K PE + +Y D+W++GC+ A M+ K F G ++ L+
Sbjct: 197 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
Score = 26.9 bits (58), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 8/26 (30%), Positives = 19/26 (73%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGK 67
+Y++V K+G+G + EV++ +N+ +
Sbjct: 38 DYQLVRKLGRGKYSEVFEAINITNNE 63
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 33.5 bits (75), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 25/47 (53%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLI 195
+K PE + +Y D+W++GC+ A M+ K F G ++ L+
Sbjct: 197 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
Score = 26.9 bits (58), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 8/26 (30%), Positives = 19/26 (73%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGK 67
+Y++V K+G+G + EV++ +N+ +
Sbjct: 38 DYQLVRKLGRGKYSEVFEAINITNNE 63
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 33.5 bits (75), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 25/47 (53%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLI 195
+K PE + +Y D+W++GC+ A M+ K F G ++ L+
Sbjct: 197 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
Score = 32.3 bits (72), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 22/29 (75%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVA 70
+Y++V K+G+G + EV++ +N+ +KVA
Sbjct: 38 DYQLVRKLGRGKYSEVFEAINITNNEKVA 66
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 33.5 bits (75), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 44/82 (53%), Gaps = 4/82 (4%)
Query: 43 YKVV-EKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELE-HD 100
YK+ E +G+G + +V ++L+ GK+ A+K+ I+ + S + V L + + +
Sbjct: 14 YKLTSELLGEGAYAKVQGAVSLQNGKEYAVKI--IEKQAGHSRSRVFREVETLYQCQGNK 71
Query: 101 NIVRLLDVLTTGRYVYLVFEYL 122
NI+ L++ YLVFE L
Sbjct: 72 NILELIEFFEDDTRFYLVFEKL 93
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 33.5 bits (75), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 25/47 (53%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLI 195
+K PE + +Y D+W++GC+ A M+ K F G ++ L+
Sbjct: 197 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
Score = 26.9 bits (58), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 8/26 (30%), Positives = 19/26 (73%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGK 67
+Y++V K+G+G + EV++ +N+ +
Sbjct: 38 DYQLVRKLGRGKYSEVFEAINITNNE 63
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 33.5 bits (75), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 29/60 (48%)
Query: 48 KIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRLLD 107
+IG+G F VYK L+ ET +VA + + + LK L+H NIVR D
Sbjct: 33 EIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYD 92
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 25/47 (53%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLI 195
+K PE + +Y D+W++GC+ A M+ K F G ++ L+
Sbjct: 202 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 248
Score = 26.9 bits (58), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 8/26 (30%), Positives = 19/26 (73%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGK 67
+Y++V K+G+G + EV++ +N+ +
Sbjct: 43 DYQLVRKLGRGKYSEVFEAINITNNE 68
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 26/47 (55%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLI 195
+K PE + +Y D+W++GC+ A M+ + F G+ ++ L+
Sbjct: 203 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLV 249
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPCGKK 189
Y +PE S S D+WA+GCI ++V+G P F G +
Sbjct: 200 YVSPELLTEKSA-SKSSDLWALGCIIYQLVAGLPPFRAGNE 239
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPCGKK-DHLSLI 195
Y+APE I + + D+W+ GC+ AE+ +G LF + +HL+++
Sbjct: 225 YRAPEV-ILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMM 271
Score = 30.4 bits (67), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 54/106 (50%), Gaps = 10/106 (9%)
Query: 45 VVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVR 104
V+ K+G G FG V C +++ K A+K+ ++N + S I +LK++++D+I
Sbjct: 39 VIRKMGDGTFGRVLLCQHIDNKKYYAVKV--VRNIKKYTRSAKIEA-DILKKIQNDDINN 95
Query: 105 LLDVLTTGRYVY-----LVFEYLDLDLGSFIRKHTITSIRPHIKEV 145
V G+++Y L+FE L L I ++ HI+++
Sbjct: 96 NNIVKYHGKFMYYDHMCLIFEPLGPSLYEIITRNNYNGF--HIEDI 139
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 33.1 bits (74), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 13/47 (27%), Positives = 26/47 (55%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLI 195
+K PE + +Y D+W++GC+ A M+ + F G+ ++ L+
Sbjct: 198 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLV 244
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 38 VKDWNYKVVEKIGQGVFGEVYKCLNLETGKK----VAIKMINIQNEPEGVPSYLIAGVSL 93
+K+ +K ++ +G G FG VYK L + G+K VAIK + P+ L +
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY-V 72
Query: 94 LKELEHDNIVRLLDVLTTGRYVYLVFEYLDLD-LGSFIRKH 133
+ +++ ++ RLL + T V L+ + + L ++R+H
Sbjct: 73 MASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREH 112
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 38 VKDWNYKVVEKIGQGVFGEVYKCLNLETGKK----VAIKMINIQNEPEGVPSYLIAGVSL 93
+K+ +K ++ +G G FG VYK L + G+K VAIK + P+ L +
Sbjct: 18 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY-V 76
Query: 94 LKELEHDNIVRLLDVLTTGRYVYLVFEYLDLD-LGSFIRKH 133
+ +++ ++ RLL + T V L+ + + L ++R+H
Sbjct: 77 MASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREH 116
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 25/47 (53%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLI 195
+K PE + +Y D+W++GC+ A M+ K F G ++ L+
Sbjct: 197 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLV 243
Score = 26.9 bits (58), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 8/26 (30%), Positives = 19/26 (73%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGK 67
+Y++V K+G+G + EV++ +N+ +
Sbjct: 38 DYQLVRKLGRGKYSEVFEAINITNNE 63
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 38 VKDWNYKVVEKIGQGVFGEVYKCLNLETGKK----VAIKMINIQNEPEGVPSYLIAGVSL 93
+K+ +K ++ +G G FG VYK L + G+K VAIK + P+ L +
Sbjct: 15 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY-V 73
Query: 94 LKELEHDNIVRLLDVLTTGRYVYLVFEYLDLD-LGSFIRKH 133
+ +++ ++ RLL + T V L+ + + L ++R+H
Sbjct: 74 MASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREH 113
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 38 VKDWNYKVVEKIGQGVFGEVYKCLNLETGKK----VAIKMINIQNEPEGVPSYLIAGVSL 93
+K+ +K ++ +G G FG VYK L + G+K VAIK + P+ L +
Sbjct: 15 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY-V 73
Query: 94 LKELEHDNIVRLLDVLTTGRYVYLVFEYLDLD-LGSFIRKH 133
+ +++ ++ RLL + T V L+ + + L ++R+H
Sbjct: 74 MASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREH 113
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 38 VKDWNYKVVEKIGQGVFGEVYKCLNLETGKK----VAIKMINIQNEPEGVPSYLIAGVSL 93
+K+ +K ++ +G G FG VYK L + G+K VAIK + P+ L +
Sbjct: 19 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY-V 77
Query: 94 LKELEHDNIVRLLDVLTTGRYVYLVFEYLDLD-LGSFIRKH 133
+ +++ ++ RLL + T V L+ + + L ++R+H
Sbjct: 78 MASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREH 117
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 38 VKDWNYKVVEKIGQGVFGEVYKCLNLETGKK----VAIKMINIQNEPEGVPSYLIAGVSL 93
+K+ +K ++ +G G FG VYK L + G+K VAIK + P+ L +
Sbjct: 14 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY-V 72
Query: 94 LKELEHDNIVRLLDVLTTGRYVYLVFEYLDLD-LGSFIRKH 133
+ +++ ++ RLL + T V L+ + + L ++R+H
Sbjct: 73 MASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREH 112
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 38 VKDWNYKVVEKIGQGVFGEVYKCLNLETGKK----VAIKMINIQNEPEGVPSYLIAGVSL 93
+K+ +K ++ +G G FG VYK L + G+K VAIK + P+ L +
Sbjct: 6 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY-V 64
Query: 94 LKELEHDNIVRLLDVLTTGRYVYLVFEYLDLD-LGSFIRKH 133
+ +++ ++ RLL + T V L+ + + L ++R+H
Sbjct: 65 MASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREH 104
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 38 VKDWNYKVVEKIGQGVFGEVYKCLNLETGKK----VAIKMINIQNEPEGVPSYLIAGVSL 93
+K+ +K ++ +G G FG VYK L + G+K VAIK + P+ L +
Sbjct: 19 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY-V 77
Query: 94 LKELEHDNIVRLLDVLTTGRYVYLVFEYLDLD-LGSFIRKH 133
+ +++ ++ RLL + T V L+ + + L ++R+H
Sbjct: 78 MASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREH 117
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 38 VKDWNYKVVEKIGQGVFGEVYKCLNLETGKK----VAIKMINIQNEPEGVPSYLIAGVSL 93
+K+ +K ++ +G G FG VYK L + G+K VAIK + P+ L +
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY-V 70
Query: 94 LKELEHDNIVRLLDVLTTGRYVYLVFEYLDLD-LGSFIRKH 133
+ +++ ++ RLL + T V L+ + + L ++R+H
Sbjct: 71 MASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREH 110
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 38 VKDWNYKVVEKIGQGVFGEVYKCLNLETGKK----VAIKMINIQNEPEGVPSYLIAGVSL 93
+K+ +K ++ +G G FG VYK L + G+K VAIK + P+ L +
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY-V 70
Query: 94 LKELEHDNIVRLLDVLTTGRYVYLVFEYLDLD-LGSFIRKH 133
+ +++ ++ RLL + T V L+ + + L ++R+H
Sbjct: 71 MASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREH 110
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 56/117 (47%), Gaps = 14/117 (11%)
Query: 33 EQMEKVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQ-----NEPEGVPSYL 87
++ E V +++++ IG+G FG+V +T K A+K +N Q NE V
Sbjct: 7 DENEDVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNV---- 62
Query: 88 IAGVSLLKELEHDNIVRLLDVLTTGRYVYLVFEYLDLDLGSFIRKHTITSIRPHIKE 144
+ +++ LEH +V L +++V +DL LG +R H ++ H KE
Sbjct: 63 FKELQIMQGLEHPFLVNLWYSFQDEEDMFMV---VDLLLGGDLRYHLQQNV--HFKE 114
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 38 VKDWNYKVVEKIGQGVFGEVYKCLNLETGKK----VAIKMINIQNEPEGVPSYLIAGVSL 93
+K+ +K ++ +G G FG VYK L + G+K VAIK + P+ L +
Sbjct: 9 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY-V 67
Query: 94 LKELEHDNIVRLLDVLTTGRYVYLVFEYLDLD-LGSFIRKH 133
+ +++ ++ RLL + T V L+ + + L ++R+H
Sbjct: 68 MASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREH 107
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 38 VKDWNYKVVEKIGQGVFGEVYKCLNLETGKK----VAIKMINIQNEPEGVPSYLIAGVSL 93
+K+ +K ++ +G G FG VYK L + G+K VAIK + P+ L +
Sbjct: 22 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY-V 80
Query: 94 LKELEHDNIVRLLDVLTTGRYVYLVFEYLDLD-LGSFIRKH 133
+ +++ ++ RLL + T V L+ + + L ++R+H
Sbjct: 81 MASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREH 120
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 38 VKDWNYKVVEKIGQGVFGEVYKCLNLETGKK----VAIKMINIQNEPEGVPSYLIAGVSL 93
+K+ +K ++ +G G FG VYK L + G+K VAIK + P+ L +
Sbjct: 15 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY-V 73
Query: 94 LKELEHDNIVRLLDVLTTGRYVYLVFEYLDLD-LGSFIRKH 133
+ +++ ++ RLL + T V L+ + + L ++R+H
Sbjct: 74 MASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREH 113
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVP-SYLIAGVSLLKELEHDN 101
+ + +IG G FG VY ++ + VAIK ++ + +I V L++L H N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 102 IVRLLDVLTTGRYVYLVFEY 121
++ +LV EY
Sbjct: 116 TIQYRGCYLREHTAWLVMEY 135
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 46 VEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVP-SYLIAGVSLLKELEHDNIVR 104
+ +IG G FG VY ++ + VAIK ++ + +I V L++L H N ++
Sbjct: 20 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQ 79
Query: 105 LLDVLTTGRYVYLVFEY 121
+LV EY
Sbjct: 80 YRGCYLREHTAWLVMEY 96
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 38 VKDWNYKVVEKIGQGVFGEVYKCLNLETGKK----VAIKMINIQNEPEGVPSYLIAGVSL 93
+K+ +K ++ +G G FG VYK L + G+K VAIK + P+ L +
Sbjct: 37 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY-V 95
Query: 94 LKELEHDNIVRLLDVLTTGRYVYLVFEYLDLD-LGSFIRKH 133
+ +++ ++ RLL + T V L+ + + L ++R+H
Sbjct: 96 MASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREH 135
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 38 VKDWNYKVVEKIGQGVFGEVYKCLNLETGKK----VAIKMINIQNEPEGVPSYLIAGVSL 93
+K+ +K ++ +G G FG VYK L + G+K VAIK + P+ L +
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY-V 70
Query: 94 LKELEHDNIVRLLDVLTTGRYVYLVFEYLDLD-LGSFIRKH 133
+ +++ ++ RLL + T V L+ + + L ++R+H
Sbjct: 71 MASVDNPHVCRLLGICLTST-VQLITQLMPFGXLLDYVREH 110
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 51/101 (50%), Gaps = 7/101 (6%)
Query: 38 VKDWNYKVVEKIGQGVFGEVYKCLNLETGKK----VAIKMINIQNEPEGVPSYLIAGVSL 93
+K+ +K ++ +G G FG VYK L + G+K VAIK + P+ L +
Sbjct: 12 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY-V 70
Query: 94 LKELEHDNIVRLLDVLTTGRYVYLVFEYLDLD-LGSFIRKH 133
+ +++ ++ RLL + T V L+ + + L ++R+H
Sbjct: 71 MASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREH 110
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKM 73
Y++ KIG G FG++Y ++ G++VAIK+
Sbjct: 9 YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKL 39
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKM 73
Y++ KIG G FG++Y ++ G++VAIK+
Sbjct: 11 YRLGRKIGSGSFGDIYLGTDIAAGEEVAIKL 41
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 32.7 bits (73), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 49 IGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELE-HDNIVRLLD 107
+G+G F KC++ ++ + A+K+I+ + E ++ LK E H NIV+L +
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKE-----ITALKLCEGHPNIVKLHE 73
Query: 108 VLTTGRYVYLVFEYLD 123
V + +LV E L+
Sbjct: 74 VFHDQLHTFLVMELLN 89
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 32.7 bits (73), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 81/214 (37%), Gaps = 61/214 (28%)
Query: 34 QMEKVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQN--EPEGVPSYLIAGV 91
Q K + ++K + +G+G F V L T ++ AIK++ ++ + VP Y+
Sbjct: 1 QPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVP-YVTRER 59
Query: 92 SLLKELEHDNIVRLLDVLTTGRYVYLVFEYL-DLDLGSFIRK---HTITSIRPHIKEVGS 147
++ L+H V+L +Y Y + +L +IRK T R + E+ S
Sbjct: 60 DVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS 119
Query: 148 PYK------------------------------------APESR-------IRSSVYSTP 164
+ +PES+ + ++ Y +P
Sbjct: 120 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 179
Query: 165 H-----------DVWAVGCIFAEMVSGKPLFPCG 187
D+WA+GCI ++V+G P F G
Sbjct: 180 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 213
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 32.7 bits (73), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 147 SPYKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPCGKK 189
+ Y +PE S + D+WA+GCI ++V+G P F G +
Sbjct: 198 AQYVSPELLTEKSAXKS-SDLWALGCIIYQLVAGLPPFRAGNE 239
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 81/214 (37%), Gaps = 61/214 (28%)
Query: 34 QMEKVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQN--EPEGVPSYLIAGV 91
Q K + ++K + +G+G F V L T ++ AIK++ ++ + VP Y+
Sbjct: 3 QPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVP-YVTRER 61
Query: 92 SLLKELEHDNIVRLLDVLTTGRYVYLVFEYL-DLDLGSFIRK---HTITSIRPHIKEVGS 147
++ L+H V+L +Y Y + +L +IRK T R + E+ S
Sbjct: 62 DVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS 121
Query: 148 PYK------------------------------------APESR-------IRSSVYSTP 164
+ +PES+ + ++ Y +P
Sbjct: 122 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 181
Query: 165 H-----------DVWAVGCIFAEMVSGKPLFPCG 187
D+WA+GCI ++V+G P F G
Sbjct: 182 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 215
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 48 KIGQGVFGEVYKCL--NLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRL 105
K+G+G FG VYK N K M++I E + + ++ + +H+N+V L
Sbjct: 38 KMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEE--LKQQFDQEIKVMAKCQHENLVEL 95
Query: 106 LDVLTTGRYVYLVFEYL 122
L + G + LV+ Y+
Sbjct: 96 LGFSSDGDDLCLVYVYM 112
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 45/82 (54%), Gaps = 9/82 (10%)
Query: 44 KVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIV 103
++V++IG+G +GEV+ + G+KVA+K+ E I L++ H+NI+
Sbjct: 40 QMVKQIGKGRYGEVW--MGKWRGEKVAVKVFFTTEEASWFRETEIYQTVLMR---HENIL 94
Query: 104 RLL--DVLTTGRY--VYLVFEY 121
+ D+ TG + +YL+ +Y
Sbjct: 95 GFIAADIKGTGSWTQLYLITDY 116
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 50/107 (46%), Gaps = 17/107 (15%)
Query: 36 EKVKDWNYKVVE---------KIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSY 86
EK+K +Y+ E ++G+G FGEV++ + +TG + A+K + ++ +
Sbjct: 44 EKLKPVDYEYREEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLE-------VF 96
Query: 87 LIAGVSLLKELEHDNIVRLLDVLTTGRYVYLVFEYLD-LDLGSFIRK 132
+ + L IV L + G +V + E L+ LG I++
Sbjct: 97 RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQ 143
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 48 KIGQGVFGEVYKCL--NLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRL 105
K+G+G FG VYK N K M++I E + + ++ + +H+N+V L
Sbjct: 32 KMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEE--LKQQFDQEIKVMAKCQHENLVEL 89
Query: 106 LDVLTTGRYVYLVFEYL 122
L + G + LV+ Y+
Sbjct: 90 LGFSSDGDDLCLVYVYM 106
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 32.3 bits (72), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNI 102
++V ++G+G VY+C T K A+K++ + + V + + +L L H NI
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTE----IGVLLRLSHPNI 110
Query: 103 VRLLDVLTTGRYVYLVFE 120
++L ++ T + LV E
Sbjct: 111 IKLKEIFETPTEISLVLE 128
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 32.3 bits (72), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 81/214 (37%), Gaps = 61/214 (28%)
Query: 34 QMEKVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQN--EPEGVPSYLIAGV 91
Q K + ++K + +G+G F V L T ++ AIK++ ++ + VP Y+
Sbjct: 2 QPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVP-YVTRER 60
Query: 92 SLLKELEHDNIVRLLDVLTTGRYVYLVFEYL-DLDLGSFIRK---HTITSIRPHIKEVGS 147
++ L+H V+L +Y Y + +L +IRK T R + E+ S
Sbjct: 61 DVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS 120
Query: 148 PYK------------------------------------APESR-------IRSSVYSTP 164
+ +PES+ + ++ Y +P
Sbjct: 121 ALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 180
Query: 165 H-----------DVWAVGCIFAEMVSGKPLFPCG 187
D+WA+GCI ++V+G P F G
Sbjct: 181 ELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAG 214
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 32.3 bits (72), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 48 KIGQGVFGEVYKCL--NLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRL 105
K+G+G FG VYK N K M++I E + + ++ + +H+N+V L
Sbjct: 38 KMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEE--LKQQFDQEIKVMAKCQHENLVEL 95
Query: 106 LDVLTTGRYVYLVFEYL 122
L + G + LV+ Y+
Sbjct: 96 LGFSSDGDDLCLVYVYM 112
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 32.3 bits (72), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 147 SPYKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPCGKK 189
+ Y +PE S + D+WA+GCI ++V+G P F G +
Sbjct: 195 AQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNE 236
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 32.3 bits (72), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 147 SPYKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPCGKK 189
+ Y +PE S + D+WA+GCI ++V+G P F G +
Sbjct: 195 AQYVSPELLTEKSACKSS-DLWALGCIIYQLVAGLPPFRAGNE 236
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 32.3 bits (72), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 51/100 (51%), Gaps = 5/100 (5%)
Query: 38 VKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSY---LIAGVSLL 94
+K+ +K ++ +G G FG VYK L + G+KV I + ++ P ++ ++
Sbjct: 46 LKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVM 105
Query: 95 KELEHDNIVRLLDVLTTGRYVYLVFEYLDLD-LGSFIRKH 133
+++ ++ RLL + T V L+ + + L ++R+H
Sbjct: 106 ASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREH 144
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 32.3 bits (72), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Query: 49 IGQGVFGEVYKCLNLETGKKVAIKMINIQN--EPEGVPSYLIAGVSLLKELEHDNIVRLL 106
+GQG V++ + +TG AIK+ N + P V + +LK+L H NIV+L
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQ---MREFEVLKKLNHKNIVKLF 73
Query: 107 DV--LTTGRYVYLVFEY 121
+ TT R+ L+ E+
Sbjct: 74 AIEEETTTRHKVLIMEF 90
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 32.3 bits (72), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 50/107 (46%), Gaps = 17/107 (15%)
Query: 36 EKVKDWNYKVVE---------KIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSY 86
EK+K +Y+ E ++G+G FGEV++ + +TG + A+K + ++ +
Sbjct: 60 EKLKPVDYEYREEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLE-------VF 112
Query: 87 LIAGVSLLKELEHDNIVRLLDVLTTGRYVYLVFEYLD-LDLGSFIRK 132
+ + L IV L + G +V + E L+ LG I++
Sbjct: 113 RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQ 159
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 32.3 bits (72), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 147 SPYKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPCG 187
+ Y +PE S + D+WA+GCI ++V+G P F G
Sbjct: 180 AQYVSPELLTEKSACKS-SDLWALGCIIYQLVAGLPPFRAG 219
>pdb|2VUW|A Chain A, Structure Of Human Haspin Kinase Domain
Length = 336
Score = 32.3 bits (72), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 23/32 (71%), Gaps = 2/32 (6%)
Query: 46 VEKIGQGVFGEVYKCLNLETGKKVAIKMINIQ 77
EKIG+GVFGEV++ + T VAIK+I I+
Sbjct: 25 CEKIGEGVFGEVFQTIADHT--PVAIKIIAIE 54
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 32.3 bits (72), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Query: 37 KVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMIN-IQNEPEGVPSYLIAGVSLLK 95
++K +Y VV+ IG+G FGEV + + K A+K+++ + ++ ++
Sbjct: 71 QMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMA 130
Query: 96 ELEHDNIVRLLDVLTTGRYVYLVFEYL 122
+V+L +Y+Y+V EY+
Sbjct: 131 FANSPWVVQLFCAFQDDKYLYMVMEYM 157
>pdb|2WB8|A Chain A, Crystal Structure Of Haspin Kinase
Length = 352
Score = 32.3 bits (72), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%), Gaps = 2/31 (6%)
Query: 47 EKIGQGVFGEVYKCLNLETGKKVAIKMINIQ 77
EKIG+GVFGEV++ + T VAIK+I I+
Sbjct: 42 EKIGEGVFGEVFQTIADHT--PVAIKIIAIE 70
>pdb|3DLZ|A Chain A, Crystal Structure Of Human Haspin In Complex With Amp
pdb|3E7V|A Chain A, Crystal Structure Of Human Haspin With A
Pyrazolo-Pyrimidine Ligand
pdb|3F2N|A Chain A, Crystal Structure Of Human Haspin With An
Imidazo-Pyridazine Ligand
pdb|3FMD|A Chain A, Crystal Structure Of Human Haspin With An Isoquinoline
Ligand
pdb|3IQ7|A Chain A, Crystal Structure Of Human Haspin In Complex With
5-Iodotubercidin
Length = 357
Score = 32.3 bits (72), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%), Gaps = 2/31 (6%)
Query: 47 EKIGQGVFGEVYKCLNLETGKKVAIKMINIQ 77
EKIG+GVFGEV++ + T VAIK+I I+
Sbjct: 47 EKIGEGVFGEVFQTIADHT--PVAIKIIAIE 75
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 32.3 bits (72), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKM 73
+YKV +IG+G FG +++ NL ++VAIK
Sbjct: 10 HYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKF 41
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 32.3 bits (72), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Query: 146 GSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF--PCGKKDHLSL 194
G+P Y APE + +S DVW++GCI ++ GKP F C K+ +L +
Sbjct: 177 GTPNYIAPEV-LSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRI 227
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 32.3 bits (72), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKM 73
+YKV +IG+G FG +++ NL ++VAIK
Sbjct: 11 HYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKF 42
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 32.0 bits (71), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 147 SPYKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPCG 187
+ Y +PE S + D+WA+GCI ++V+G P F G
Sbjct: 173 AQYVSPELLTEKSACKS-SDLWALGCIIYQLVAGLPPFRAG 212
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 147 SPYKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPCGKK 189
+ Y +PE S + D+WA+GCI ++V+G P F G +
Sbjct: 198 AQYVSPELLTEKSACKS-SDLWALGCIIYQLVAGLPPFRAGNE 239
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 147 SPYKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPCGKK 189
+ Y +PE S + D+WA+GCI ++V+G P F G +
Sbjct: 196 AQYVSPELLTEKSACKS-SDLWALGCIIYQLVAGLPPFRAGNE 237
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 15/89 (16%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKM--------INIQNEPEGVPSYLIAGVSLL 94
+ +EKIG G FG V+KC+ G AIK ++ QN V ++ + G
Sbjct: 11 FHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLG---- 66
Query: 95 KELEHDNIVRLLDVLTTGRYVYLVFEYLD 123
+H ++VR ++ + EY +
Sbjct: 67 ---QHSHVVRYFSAWAEDDHMLIQNEYCN 92
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPCGK-------KDHLSLIVRYFTA 201
Y++PE + + + D+W+ C+ E+++G LF + DH++ I+
Sbjct: 201 YRSPEVLL-GAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGE 259
Query: 202 LTNYLV 207
L +YL+
Sbjct: 260 LPSYLL 265
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/108 (22%), Positives = 50/108 (46%), Gaps = 26/108 (24%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQN----------------------- 78
Y + ++IG+G +G V N A+K+++ +
Sbjct: 14 QYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGC 73
Query: 79 -EPEGVPSYLIAGVSLLKELEHDNIVRLLDVLTTGR--YVYLVFEYLD 123
+P G + +++LK+L+H N+V+L++VL ++Y+VFE ++
Sbjct: 74 IQPRGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVN 121
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 15/89 (16%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKM--------INIQNEPEGVPSYLIAGVSLL 94
+ +EKIG G FG V+KC+ G AIK ++ QN V ++ + G
Sbjct: 11 FHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLG---- 66
Query: 95 KELEHDNIVRLLDVLTTGRYVYLVFEYLD 123
+H ++VR ++ + EY +
Sbjct: 67 ---QHSHVVRYFSAWAEDDHMLIQNEYCN 92
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 32.0 bits (71), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 147 SPYKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPCGKK 189
+ Y +PE S + D+WA+GCI ++V+G P F G +
Sbjct: 196 AQYVSPELLTEKSACKS-SDLWALGCIIYQLVAGLPPFRAGNE 237
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 32.0 bits (71), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 147 SPYKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPCGKK 189
+ Y +PE S + D+WA+GCI ++V+G P F G +
Sbjct: 198 AQYVSPELLTEKSACKS-SDLWALGCIIYQLVAGLPPFRAGNE 239
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 32.0 bits (71), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 147 SPYKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPCGKK 189
+ Y +PE S + D+WA+GCI ++V+G P F G +
Sbjct: 196 AQYVSPELLTEKSACKS-SDLWALGCIIYQLVAGLPPFRAGNE 237
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 32.0 bits (71), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
Query: 48 KIGQGVFGEVYKCLNLETG-KKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRLL 106
K+GQG FGEV+ + G +VAIK + P + ++K+L H+ +V+L
Sbjct: 15 KLGQGCFGEVW--MGTWNGTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLY 69
Query: 107 DVLTTGRYVYLVFEYLDL-DLGSFIRKHTITSIR 139
V++ + +V EY+ L F++ T +R
Sbjct: 70 AVVSE-EPIXIVTEYMSKGSLLDFLKGETGKYLR 102
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 32.0 bits (71), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPCGK-------KDHLSLIVRYFTA 201
Y++PE + + + D+W+ C+ E+++G LF + DH++ I+
Sbjct: 201 YRSPEVLL-GAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGE 259
Query: 202 LTNYLV 207
L +YL+
Sbjct: 260 LPSYLL 265
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 32.0 bits (71), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 49 IGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRLLDV 108
+GQG V++ + +TG AIK+ N + V + +LK+L H NIV+L +
Sbjct: 17 LGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPV-DVQMREFEVLKKLNHKNIVKLFAI 75
Query: 109 --LTTGRYVYLVFEY 121
TT R+ L+ E+
Sbjct: 76 EEETTTRHKVLIMEF 90
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 32.0 bits (71), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPCGKK 189
Y +PE S + D+WA+GCI ++V+G P F G +
Sbjct: 200 YVSPELLTEKSACKS-SDLWALGCIIYQLVAGLPPFRAGNE 239
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 32.0 bits (71), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 147 SPYKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPCGKK 189
+ Y +PE S + D+WA+GCI ++V+G P F G +
Sbjct: 196 AQYVSPELLTEKSACKS-SDLWALGCIIYQLVAGLPPFRAGNE 237
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 32.0 bits (71), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 15/89 (16%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKM--------INIQNEPEGVPSYLIAGVSLL 94
+ +EKIG G FG V+KC+ G AIK ++ QN V ++ + G
Sbjct: 13 FHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLG---- 68
Query: 95 KELEHDNIVRLLDVLTTGRYVYLVFEYLD 123
+H ++VR ++ + EY +
Sbjct: 69 ---QHSHVVRYFSAWAEDDHMLIQNEYCN 94
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 32.0 bits (71), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 50/107 (46%), Gaps = 17/107 (15%)
Query: 36 EKVKDWNYKVVE---------KIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSY 86
EK+K +Y+ E ++G+G FGEV++ + +TG + A+K + ++ +
Sbjct: 58 EKLKPVDYEYREEVHWMTHQPRLGRGSFGEVHRMKDKQTGFQCAVKKVRLE-------VF 110
Query: 87 LIAGVSLLKELEHDNIVRLLDVLTTGRYVYLVFEYLD-LDLGSFIRK 132
+ + L IV L + G +V + E L+ LG I++
Sbjct: 111 RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQ 157
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 32.0 bits (71), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPCGKK 189
Y +PE S + D+WA+GCI ++V+G P F G +
Sbjct: 201 YVSPELLTEKSACKS-SDLWALGCIIYQLVAGLPPFRAGNE 240
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 32.0 bits (71), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 147 SPYKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPCGKK 189
+ Y +PE S + D+WA+GCI ++V+G P F G +
Sbjct: 198 AQYVSPELLTEKSACKS-SDLWALGCIIYQLVAGLPPFRAGNE 239
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 32.0 bits (71), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPCGKK 189
Y +PE S + D+WA+GCI ++V+G P F G +
Sbjct: 201 YVSPELLTEKSACKS-SDLWALGCIIYQLVAGLPPFRAGNE 240
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 32.0 bits (71), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 15/89 (16%)
Query: 43 YKVVEKIGQGVFGEVYKCLNLETGKKVAIKM--------INIQNEPEGVPSYLIAGVSLL 94
+ +EKIG G FG V+KC+ G AIK ++ QN V ++ + G
Sbjct: 9 FHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLG---- 64
Query: 95 KELEHDNIVRLLDVLTTGRYVYLVFEYLD 123
+H ++VR ++ + EY +
Sbjct: 65 ---QHSHVVRYFSAWAEDDHMLIQNEYCN 90
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 32.0 bits (71), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPCGKK 189
Y +PE S + D+WA+GCI ++V+G P F G +
Sbjct: 203 YVSPELLTEKSACKS-SDLWALGCIIYQLVAGLPPFRAGNE 242
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 32.0 bits (71), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 44/102 (43%), Gaps = 20/102 (19%)
Query: 29 TNGSEQMEKVKDWN-YKVVEKIGQGVFGEVYKCLNLETGKKVAIKMI--------NIQNE 79
T G M + D + Y V+ IG G FG + T + VA+K I N+Q E
Sbjct: 7 TTGPLDMPIMHDSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQRE 66
Query: 80 PEGVPSYLIAGVSLLKELEHDNIVRLLDVLTTGRYVYLVFEY 121
+ + L H NIVR +V+ T ++ ++ EY
Sbjct: 67 -----------IINHRSLRHPNIVRFKEVILTPTHLAIIMEY 97
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPCGKK 189
Y +PE S + D+WA+GCI ++V+G P F G +
Sbjct: 205 YVSPELLTEKSACKS-SDLWALGCIIYQLVAGLPPFRAGNE 244
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Query: 146 GSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF--PCGKKDHLSL 194
G+P Y APE + +S DVW++GCI ++ GKP F C K+ +L +
Sbjct: 179 GTPNYIAPEV-LSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRI 229
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Query: 146 GSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF--PCGKKDHLSL 194
G+P Y APE + +S DVW++GCI ++ GKP F C K+ +L +
Sbjct: 179 GTPNYIAPEV-LSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRI 229
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 31.6 bits (70), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Query: 146 GSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF--PCGKKDHLSL 194
G+P Y APE + +S DVW++GCI ++ GKP F C K+ +L +
Sbjct: 201 GTPNYIAPEV-LSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRI 251
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 31.6 bits (70), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 44/81 (54%), Gaps = 9/81 (11%)
Query: 49 IGQGVFGEV--YKCLNLETGK-----KVAIKMINIQNEPEGVPSYLIAGVSLLKEL-EHD 100
+G+G FG+V + + ++ K VA+KM+ E + S L++ + ++K + +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDL-SDLVSEMEMMKMIGKHK 101
Query: 101 NIVRLLDVLTTGRYVYLVFEY 121
NI+ LL T +Y++ EY
Sbjct: 102 NIINLLGACTQDGPLYVIVEY 122
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 31.6 bits (70), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
+++ ++ +G+G FG V++ N AIK I + N E ++ V L +LEH
Sbjct: 7 DFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNR-ELAREKVMREVKALAKLEHPG 65
Query: 102 IVRLLDV 108
IVR +
Sbjct: 66 IVRYFNA 72
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 31.6 bits (70), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Query: 146 GSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF--PCGKKDHLSL 194
G+P Y APE + +S DVW++GCI ++ GKP F C K+ +L +
Sbjct: 183 GTPNYIAPEV-LSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRI 233
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 31.6 bits (70), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQN 78
N++V +KIG G FGE+ NL T + VAIK+ I++
Sbjct: 5 NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKS 41
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 31.6 bits (70), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Query: 145 VGSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGK-PLFPCGKKDHLSLIVRYFT 200
G+P ++APE + +T D+W+ G IF ++SG+ P + D L+ + + T
Sbjct: 207 AGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKAS--DDLTALAQIMT 262
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 31.6 bits (70), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 13/83 (15%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHD- 100
++ ++ +G G FG V ++ETG A+K+++ Q V LKE+EH
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQK------------VVKLKEIEHTL 89
Query: 101 NIVRLLDVLTTGRYVYLVFEYLD 123
N R+L + V L F + D
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKD 112
Score = 30.8 bits (68), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 146 GSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
G+P Y APE I S Y+ D WA+G + EM +G P F
Sbjct: 200 GTPEYLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 31.6 bits (70), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 13/83 (15%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHD- 100
++ ++ +G G FG V ++ETG A+K+++ Q V LKE+EH
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQK------------VVKLKEIEHTL 89
Query: 101 NIVRLLDVLTTGRYVYLVFEYLD 123
N R+L + V L F + D
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKD 112
Score = 30.8 bits (68), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 146 GSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
G+P Y APE I S Y+ D WA+G + EM +G P F
Sbjct: 200 GTPEYLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 31.6 bits (70), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
+++ ++ +G+G FG V++ N AIK I + N E ++ V L +LEH
Sbjct: 6 DFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNR-ELAREKVMREVKALAKLEHPG 64
Query: 102 IVRLLDV 108
IVR +
Sbjct: 65 IVRYFNA 71
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 31.6 bits (70), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 46 VEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRL 105
++++G G FG V K VAIKMI + E I ++ L H+ +V+L
Sbjct: 29 LKELGTGQFG-VVKYGKWRGQYDVAIKMIKEGSMSE---DEFIEEAKVMMNLSHEKLVQL 84
Query: 106 LDVLTTGRYVYLVFEYL 122
V T R ++++ EY+
Sbjct: 85 YGVCTKQRPIFIITEYM 101
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 31.6 bits (70), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Query: 146 GSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF--PCGKKDHLSL 194
G+P Y APE + +S DVW++GCI ++ GKP F C K+ +L +
Sbjct: 203 GTPNYIAPEV-LSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRI 253
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 31.6 bits (70), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 46 VEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRL 105
++++G G FG V K VAIKMI + E I ++ L H+ +V+L
Sbjct: 29 LKELGTGQFG-VVKYGKWRGQYDVAIKMIKEGSMSE---DEFIEEAKVMMNLSHEKLVQL 84
Query: 106 LDVLTTGRYVYLVFEYL 122
V T R ++++ EY+
Sbjct: 85 YGVCTKQRPIFIITEYM 101
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 31.6 bits (70), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 13/83 (15%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHD- 100
++ ++ IG G FG V ++ETG A+K+++ Q V LK++EH
Sbjct: 42 QFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQK------------VVKLKQIEHTL 89
Query: 101 NIVRLLDVLTTGRYVYLVFEYLD 123
N R+L + V L F + D
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKD 112
Score = 30.8 bits (68), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 146 GSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
G+P Y APE I S Y+ D WA+G + EM +G P F
Sbjct: 200 GTPEYLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 31.6 bits (70), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Query: 46 VEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRL 105
++++G G FG V K VAIKMI E I ++ L H+ +V+L
Sbjct: 14 LKELGTGQFG-VVKYGKWRGQYDVAIKMIK---EGSMSEDEFIEEAKVMMNLSHEKLVQL 69
Query: 106 LDVLTTGRYVYLVFEYL 122
V T R ++++ EY+
Sbjct: 70 YGVCTKQRPIFIITEYM 86
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 31.6 bits (70), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Query: 46 VEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRL 105
++++G G FG V K VAIKMI E I ++ L H+ +V+L
Sbjct: 13 LKELGTGQFG-VVKYGKWRGQYDVAIKMIK---EGSMSEDEFIEEAKVMMNLSHEKLVQL 68
Query: 106 LDVLTTGRYVYLVFEYL 122
V T R ++++ EY+
Sbjct: 69 YGVCTKQRPIFIITEYM 85
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 31.6 bits (70), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 13/83 (15%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHD- 100
++ ++ IG G FG V ++ETG A+K+++ Q V LK++EH
Sbjct: 42 QFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQK------------VVKLKQIEHTL 89
Query: 101 NIVRLLDVLTTGRYVYLVFEYLD 123
N R+L + V L F + D
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKD 112
Score = 30.8 bits (68), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 146 GSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
G+P Y APE I S Y+ D WA+G + EM +G P F
Sbjct: 200 GTPEYLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 31.6 bits (70), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 13/83 (15%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHD- 100
++ ++ IG G FG V ++ETG A+K+++ Q V LK++EH
Sbjct: 42 QFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQK------------VVKLKQIEHTL 89
Query: 101 NIVRLLDVLTTGRYVYLVFEYLD 123
N R+L + V L F + D
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKD 112
Score = 30.8 bits (68), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 146 GSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
G+P Y APE I S Y+ D WA+G + EM +G P F
Sbjct: 200 GTPEYLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 31.6 bits (70), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 38 VKDWNYKVVEKIGQGVFGEVYKCLNLETGKK----VAIKMINIQNEPEGVPSYLIAGVSL 93
+K+ +K ++ + G FG VYK L + G+K VAIK + P+ L +
Sbjct: 19 LKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY-V 77
Query: 94 LKELEHDNIVRLLDVLTTGRYVYLVFEYLDLD-LGSFIRKH 133
+ +++ ++ RLL + T V L+ + + L ++R+H
Sbjct: 78 MASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYVREH 117
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 31.2 bits (69), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Query: 46 VEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRL 105
++++G G FG V K VAIKMI E I ++ L H+ +V+L
Sbjct: 14 LKELGTGQFG-VVKYGKWRGQYDVAIKMIK---EGSMSEDEFIEEAKVMMNLSHEKLVQL 69
Query: 106 LDVLTTGRYVYLVFEYL 122
V T R ++++ EY+
Sbjct: 70 YGVCTKQRPIFIITEYM 86
>pdb|2HA8|A Chain A, Methyltransferase Domain Of Human Tar (Hiv-1) Rna Binding
Protein 1
pdb|2HA8|B Chain B, Methyltransferase Domain Of Human Tar (Hiv-1) Rna Binding
Protein 1
Length = 184
Score = 31.2 bits (69), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Query: 78 NEPEGVPSYLIAGVSLLKELEHDNIVRLLDVLTTGRYVYLVFEY 121
NE EG+P+ LI + + E+ I+R L+V +G L++EY
Sbjct: 130 NEREGIPANLIQQLDVCVEIPQQGIIRSLNVHVSG--ALLIWEY 171
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 31.2 bits (69), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Query: 46 VEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRL 105
++++G G FG V K VAIKMI E I ++ L H+ +V+L
Sbjct: 9 LKELGTGQFG-VVKYGKWRGQYDVAIKMIK---EGSMSEDEFIEEAKVMMNLSHEKLVQL 64
Query: 106 LDVLTTGRYVYLVFEYL 122
V T R ++++ EY+
Sbjct: 65 YGVCTKQRPIFIITEYM 81
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 31.2 bits (69), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Query: 46 VEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRL 105
++++G G FG V K VAIKMI E I ++ L H+ +V+L
Sbjct: 20 LKELGTGQFG-VVKYGKWRGQYDVAIKMIK---EGSMSEDEFIEEAKVMMNLSHEKLVQL 75
Query: 106 LDVLTTGRYVYLVFEYL 122
V T R ++++ EY+
Sbjct: 76 YGVCTKQRPIFIITEYM 92
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 31.2 bits (69), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Query: 145 VGSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
G+P Y APE I S Y+ D WA+G + EM +G P F
Sbjct: 199 AGTPEYLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Score = 26.9 bits (58), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 13/83 (15%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHD- 100
+ ++ +G G FG V + E+G A+K+++ Q V LK++EH
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK------------VVKLKQIEHTL 89
Query: 101 NIVRLLDVLTTGRYVYLVFEYLD 123
N R+L + V L F + D
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKD 112
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 31.2 bits (69), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Query: 146 GSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPCGKKDHL 192
G+P Y APE I Y D WA G + EM++G+P F +D L
Sbjct: 182 GTPDYIAPEI-IAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDEL 228
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 30.8 bits (68), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 49/108 (45%), Gaps = 17/108 (15%)
Query: 36 EKVKDWNYKVVE---------KIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSY 86
EK+K +Y+ E ++G+G FGEV++ + +TG + A+K + ++ +
Sbjct: 79 EKLKPVDYEYREEVHWATHQLRLGRGSFGEVHRMEDKQTGFQCAVKKVRLE-------VF 131
Query: 87 LIAGVSLLKELEHDNIVRLLDVLTTGRYVYLVFEYLD-LDLGSFIRKH 133
+ L IV L + G +V + E L+ LG +++
Sbjct: 132 RAEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQ 179
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 30.8 bits (68), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 44/81 (54%), Gaps = 9/81 (11%)
Query: 49 IGQGVFGEV--YKCLNLETGKK-----VAIKMINIQNEPEGVPSYLIAGVSLLKEL-EHD 100
+G+G FG+V + + ++ K VA+KM+ + E S L++ + ++K + +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK-DDATEKDLSDLVSEMEMMKMIGKHK 101
Query: 101 NIVRLLDVLTTGRYVYLVFEY 121
NI+ LL T +Y++ EY
Sbjct: 102 NIINLLGACTQDGPLYVIVEY 122
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 30.8 bits (68), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 49/108 (45%), Gaps = 17/108 (15%)
Query: 36 EKVKDWNYKVVE---------KIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSY 86
EK+K +Y+ E ++G+G FGEV++ + +TG + A+K + ++ +
Sbjct: 60 EKLKPVDYEYREEVHWATHQLRLGRGSFGEVHRMEDKQTGFQCAVKKVRLE-------VF 112
Query: 87 LIAGVSLLKELEHDNIVRLLDVLTTGRYVYLVFEYLD-LDLGSFIRKH 133
+ L IV L + G +V + E L+ LG +++
Sbjct: 113 RAEELMACAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQ 160
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 30.8 bits (68), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 146 GSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
G+P Y APE I S Y+ D WA+G + EM +G P F
Sbjct: 195 GTPEYLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 233
Score = 26.6 bits (57), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 13/83 (15%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHD- 100
+ ++ +G G FG V + E+G A+K+++ Q V LK++EH
Sbjct: 37 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK------------VVKLKQIEHTL 84
Query: 101 NIVRLLDVLTTGRYVYLVFEYLD 123
N R+L + V L F + D
Sbjct: 85 NEKRILQAVNFPFLVKLEFSFKD 107
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 30.8 bits (68), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 146 GSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
G+P Y APE I S Y+ D WA+G + EM +G P F
Sbjct: 187 GTPEYLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 225
Score = 26.9 bits (58), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 13/83 (15%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHD- 100
+ ++ +G G FG V + E+G A+K+++ Q V LK++EH
Sbjct: 29 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK------------VVKLKQIEHTL 76
Query: 101 NIVRLLDVLTTGRYVYLVFEYLD 123
N R+L + V L F + D
Sbjct: 77 NEKRILQAVNFPFLVKLEFSFKD 99
>pdb|3G3B|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|C Chain C, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|E Chain E, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|G Chain G, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
Length = 170
Score = 30.8 bits (68), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 4/50 (8%)
Query: 107 DVLTTGRYV----YLVFEYLDLDLGSFIRKHTITSIRPHIKEVGSPYKAP 152
D+L R++ +LVF YL+LD S T T +R K SP K P
Sbjct: 120 DILYLSRWISQHPWLVFGYLNLDHDSARCSGTNTPVRAVTKASTSPSKCP 169
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 30.8 bits (68), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 146 GSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
G+P Y APE I S Y+ D WA+G + EM +G P F
Sbjct: 186 GTPEYLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 224
Score = 30.4 bits (67), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 13/83 (15%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHD- 100
++ ++ +G G FG V ++ETG A+K+++ Q V LK++EH
Sbjct: 28 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQK------------VVKLKQIEHTL 75
Query: 101 NIVRLLDVLTTGRYVYLVFEYLD 123
N R+L + V L F + D
Sbjct: 76 NEKRILQAVNFPFLVKLEFSFKD 98
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 30.8 bits (68), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 146 GSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
G+P Y APE I S Y+ D WA+G + EM +G P F
Sbjct: 200 GTPEYLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Score = 26.9 bits (58), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 13/83 (15%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHD- 100
+ ++ +G G FG V + E+G A+K+++ Q V LK++EH
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK------------VVKLKQIEHTL 89
Query: 101 NIVRLLDVLTTGRYVYLVFEYLD 123
N R+L + V L F + D
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKD 112
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 30.8 bits (68), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 20/99 (20%)
Query: 47 EKIGQGVFGEV-----YKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELE--- 98
+ +G G FG+V Y + + VA+KM+ +P ++L +L+ EL+
Sbjct: 29 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKML----KPS---AHLTEREALMSELKVLS 81
Query: 99 ----HDNIVRLLDVLTTGRYVYLVFEYLDL-DLGSFIRK 132
H NIV LL T G ++ EY DL +F+R+
Sbjct: 82 YLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRR 120
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 30.8 bits (68), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 146 GSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
G+P Y APE I S Y+ D WA+G + EM +G P F
Sbjct: 200 GTPEYLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Score = 26.9 bits (58), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 13/83 (15%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHD- 100
+ ++ +G G FG V + E+G A+K+++ Q V LK++EH
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK------------VVKLKQIEHTL 89
Query: 101 NIVRLLDVLTTGRYVYLVFEYLD 123
N R+L + V L F + D
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKD 112
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 30.8 bits (68), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 44/81 (54%), Gaps = 9/81 (11%)
Query: 49 IGQGVFGEV--YKCLNLETGKK-----VAIKMINIQNEPEGVPSYLIAGVSLLKEL-EHD 100
+G+G FG+V + + ++ K VA+KM+ + E S L++ + ++K + +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK-DDATEKDLSDLVSEMEMMKMIGKHK 101
Query: 101 NIVRLLDVLTTGRYVYLVFEY 121
NI+ LL T +Y++ EY
Sbjct: 102 NIINLLGACTQDGPLYVIVEY 122
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 30.8 bits (68), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 146 GSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
G+P Y APE I S Y+ D WA+G + EM +G P F
Sbjct: 201 GTPEYLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
Score = 26.9 bits (58), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 13/83 (15%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHD- 100
+ ++ +G G FG V + E+G A+K+++ Q V LK++EH
Sbjct: 43 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK------------VVKLKQIEHTL 90
Query: 101 NIVRLLDVLTTGRYVYLVFEYLD 123
N R+L + V L F + D
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKD 113
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 30.8 bits (68), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 146 GSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
G+P Y APE I S Y+ D WA+G + EM +G P F
Sbjct: 200 GTPEYLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Score = 26.9 bits (58), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 13/83 (15%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHD- 100
+ ++ +G G FG V + E+G A+K+++ Q V LK++EH
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK------------VVKLKQIEHTL 89
Query: 101 NIVRLLDVLTTGRYVYLVFEYLD 123
N R+L + V L F + D
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKD 112
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 30.8 bits (68), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 146 GSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
G+P Y APE I S Y+ D WA+G + EM +G P F
Sbjct: 200 GTPEYLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Score = 26.9 bits (58), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 13/83 (15%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHD- 100
+ ++ +G G FG V + E+G A+K+++ Q V LK++EH
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK------------VVKLKQIEHTL 89
Query: 101 NIVRLLDVLTTGRYVYLVFEYLD 123
N R+L + V L F + D
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKD 112
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 30.8 bits (68), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 146 GSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
G+P Y APE I S Y+ D WA+G + EM +G P F
Sbjct: 200 GTPEYLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Score = 26.9 bits (58), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 13/83 (15%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHD- 100
+ ++ +G G FG V + E+G A+K+++ Q V LK++EH
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK------------VVKLKQIEHTL 89
Query: 101 NIVRLLDVLTTGRYVYLVFEYLD 123
N R+L + V L F + D
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKD 112
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 30.8 bits (68), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 146 GSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
G+P Y APE I S Y+ D WA+G + EM +G P F
Sbjct: 200 GTPEYLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Score = 26.9 bits (58), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 13/83 (15%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHD- 100
+ ++ +G G FG V + E+G A+K+++ Q V LK++EH
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK------------VVKLKQIEHTL 89
Query: 101 NIVRLLDVLTTGRYVYLVFEYLD 123
N R+L + V L F + D
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKD 112
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 30.8 bits (68), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 146 GSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
G+P Y APE I S Y+ D WA+G + EM +G P F
Sbjct: 200 GTPEYLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Score = 26.9 bits (58), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 13/83 (15%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHD- 100
+ ++ +G G FG V + E+G A+K+++ Q V LK++EH
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK------------VVKLKQIEHTL 89
Query: 101 NIVRLLDVLTTGRYVYLVFEYLD 123
N R+L + V L F + D
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKD 112
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 30.8 bits (68), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 146 GSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
G+P Y APE I S Y+ D WA+G + EM +G P F
Sbjct: 200 GTPEYLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Score = 30.4 bits (67), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 13/83 (15%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHD- 100
++ ++ +G G FG V ++ETG A+K+++ Q V LK++EH
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQK------------VVKLKQIEHTL 89
Query: 101 NIVRLLDVLTTGRYVYLVFEYLD 123
N R+L + V L F + D
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKD 112
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 30.8 bits (68), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 146 GSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
G+P Y APE I S Y+ D WA+G + EM +G P F
Sbjct: 200 GTPEYLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Score = 30.4 bits (67), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 13/83 (15%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHD- 100
++ ++ +G G FG V ++ETG A+K+++ Q V LK++EH
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQK------------VVKLKQIEHTL 89
Query: 101 NIVRLLDVLTTGRYVYLVFEYLD 123
N R+L + V L F + D
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKD 112
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 30.8 bits (68), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 3/39 (7%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPCG 187
Y +PE R++ + YS D+W++G EM G+ +P G
Sbjct: 188 YMSPE-RLQGTHYSVQSDIWSMGLSLVEMAVGR--YPIG 223
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/91 (20%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 33 EQMEKVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVS 92
+++ ++KD +++ + ++G G G V+K + +G +A K+I+++ +P + + +I +
Sbjct: 17 QKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKP-AIRNQIIRELQ 75
Query: 93 LLKELEHDNIVRLLDVLTTGRYVYLVFEYLD 123
+L E IV + + + E++D
Sbjct: 76 VLHECNSPYIVGFYGAFYSDGEISICMEHMD 106
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 30.8 bits (68), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 44/81 (54%), Gaps = 9/81 (11%)
Query: 49 IGQGVFGEV--YKCLNLETGK-----KVAIKMINIQNEPEGVPSYLIAGVSLLKEL-EHD 100
+G+G FG+V + + ++ K VA+KM+ + E S L++ + ++K + +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK-DDATEKDLSDLVSEMEMMKMIGKHK 101
Query: 101 NIVRLLDVLTTGRYVYLVFEY 121
NI+ LL T +Y++ EY
Sbjct: 102 NIIHLLGACTQDGPLYVIVEY 122
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 30.8 bits (68), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 146 GSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
G+P Y APE I S Y+ D WA+G + EM +G P F
Sbjct: 201 GTPEYLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
Score = 30.4 bits (67), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 13/83 (15%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHD- 100
++ ++ +G G FG V ++ETG A+K+++ Q V LK++EH
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQK------------VVKLKQIEHTL 90
Query: 101 NIVRLLDVLTTGRYVYLVFEYLD 123
N R+L + V L F + D
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKD 113
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 30.8 bits (68), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 146 GSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
G+P Y APE I S Y+ D WA+G + EM +G P F
Sbjct: 200 GTPEYLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Score = 30.4 bits (67), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 13/83 (15%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHD- 100
++ ++ +G G FG V ++ETG A+K+++ Q V LK++EH
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQK------------VVKLKQIEHTL 89
Query: 101 NIVRLLDVLTTGRYVYLVFEYLD 123
N R+L + V L F + D
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKD 112
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 30.8 bits (68), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 146 GSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
G+P Y APE I S Y+ D WA+G + EM +G P F
Sbjct: 201 GTPEYLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
Score = 30.4 bits (67), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 13/83 (15%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHD- 100
++ ++ +G G FG V ++ETG A+K+++ Q V LK++EH
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQK------------VVKLKQIEHTL 90
Query: 101 NIVRLLDVLTTGRYVYLVFEYLD 123
N R+L + V L F + D
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKD 113
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 30.8 bits (68), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 146 GSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
G+P Y APE I S Y+ D WA+G + EM +G P F
Sbjct: 200 GTPEYLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Score = 26.9 bits (58), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 13/83 (15%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHD- 100
+ ++ +G G FG V + E+G A+K+++ Q V LK++EH
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK------------VVKLKQIEHTL 89
Query: 101 NIVRLLDVLTTGRYVYLVFEYLD 123
N R+L + V L F + D
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKD 112
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 30.8 bits (68), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 146 GSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
G+P Y APE I S Y+ D WA+G + EM +G P F
Sbjct: 193 GTPEYLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 231
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 13/83 (15%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHD- 100
++ ++ +G G FG V + ETG A+K+++ Q V LK++EH
Sbjct: 35 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQK------------VVKLKQIEHTL 82
Query: 101 NIVRLLDVLTTGRYVYLVFEYLD 123
N R+L + V L F + D
Sbjct: 83 NEKRILQAVNFPFLVKLEFSFKD 105
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 30.8 bits (68), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 146 GSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
G+P Y APE I S Y+ D WA+G + EM +G P F
Sbjct: 193 GTPEYLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 231
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 13/83 (15%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHD- 100
++ ++ +G G FG V + ETG A+K+++ Q V LK++EH
Sbjct: 35 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQK------------VVKLKQIEHTL 82
Query: 101 NIVRLLDVLTTGRYVYLVFEYLD 123
N R+L + V L F + D
Sbjct: 83 NEKRILQAVNFPFLVKLEFSFKD 105
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 30.8 bits (68), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 146 GSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
G+P Y APE I S Y+ D WA+G + EM +G P F
Sbjct: 200 GTPEYLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Score = 30.4 bits (67), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 13/83 (15%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHD- 100
++ ++ +G G FG V ++ETG A+K+++ Q V LK++EH
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQK------------VVKLKQIEHTL 89
Query: 101 NIVRLLDVLTTGRYVYLVFEYLD 123
N R+L + V L F + D
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKD 112
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 30.8 bits (68), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 146 GSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
G+P Y APE I S Y+ D WA+G + EM +G P F
Sbjct: 201 GTPEYLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
Score = 30.4 bits (67), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 13/83 (15%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHD- 100
++ ++ +G G FG V ++ETG A+K+++ Q V LK++EH
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQK------------VVKLKQIEHTL 90
Query: 101 NIVRLLDVLTTGRYVYLVFEYLD 123
N R+L + V L F + D
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKD 113
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 30.8 bits (68), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 146 GSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
G+P Y APE I S Y+ D WA+G + EM +G P F
Sbjct: 200 GTPEYLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Score = 30.4 bits (67), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 13/83 (15%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHD- 100
++ ++ +G G FG V ++ETG A+K+++ Q V LK++EH
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQK------------VVKLKQIEHTL 89
Query: 101 NIVRLLDVLTTGRYVYLVFEYLD 123
N R+L + V L F + D
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKD 112
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 30.8 bits (68), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 20/97 (20%)
Query: 49 IGQGVFGEV-----YKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELE----- 98
+G G FG+V Y + + VA+KM+ ++L +L+ EL+
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPS-------AHLTEREALMSELKVLSYL 99
Query: 99 --HDNIVRLLDVLTTGRYVYLVFEYLDL-DLGSFIRK 132
H NIV LL T G ++ EY DL +F+R+
Sbjct: 100 GNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRR 136
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 30.8 bits (68), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 146 GSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
G+P Y APE I S Y+ D WA+G + EM +G P F
Sbjct: 200 GTPEYLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Score = 26.9 bits (58), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 13/83 (15%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHD- 100
+ ++ +G G FG V + E+G A+K+++ Q V LK++EH
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK------------VVKLKQIEHTL 89
Query: 101 NIVRLLDVLTTGRYVYLVFEYLD 123
N R+L + V L F + D
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKD 112
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 30.8 bits (68), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 45/97 (46%), Gaps = 9/97 (9%)
Query: 44 KVVEKIGQGVFGEVYKC----LNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEH 99
K + ++G+G FG V C L TG VA+K +Q+ + +LK L
Sbjct: 26 KYISQLGKGNFGSVELCRYDPLGDNTGALVAVK--QLQHSGPDQQRDFQREIQILKALHS 83
Query: 100 DNIVRLLDV-LTTGRY-VYLVFEYLDLD-LGSFIRKH 133
D IV+ V GR + LV EYL L F+++H
Sbjct: 84 DFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRH 120
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 30.8 bits (68), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 44/81 (54%), Gaps = 9/81 (11%)
Query: 49 IGQGVFGEV--YKCLNLETGK-----KVAIKMINIQNEPEGVPSYLIAGVSLLKEL-EHD 100
+G+G FG+V + + ++ K VA+KM+ + E S L++ + ++K + +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK-DDATEKDLSDLVSEMEMMKMIGKHK 101
Query: 101 NIVRLLDVLTTGRYVYLVFEY 121
NI+ LL T +Y++ EY
Sbjct: 102 NIINLLGACTQDGPLYVIVEY 122
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 30.8 bits (68), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 44/81 (54%), Gaps = 9/81 (11%)
Query: 49 IGQGVFGEV--YKCLNLETGK-----KVAIKMINIQNEPEGVPSYLIAGVSLLKEL-EHD 100
+G+G FG+V + + ++ K VA+KM+ + E S L++ + ++K + +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK-DDATEKDLSDLVSEMEMMKMIGKHK 101
Query: 101 NIVRLLDVLTTGRYVYLVFEY 121
NI+ LL T +Y++ EY
Sbjct: 102 NIINLLGACTQDGPLYVIVEY 122
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 30.8 bits (68), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 146 GSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
G+P Y APE I S Y+ D WA+G + EM +G P F
Sbjct: 221 GTPEYLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
Score = 26.9 bits (58), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 13/83 (15%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHD- 100
+ ++ +G G FG V + E+G A+K+++ Q V LK++EH
Sbjct: 63 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK------------VVKLKQIEHTL 110
Query: 101 NIVRLLDVLTTGRYVYLVFEYLD 123
N R+L + V L F + D
Sbjct: 111 NEKRILQAVNFPFLVKLEFSFKD 133
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 30.8 bits (68), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 146 GSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
G+P Y APE I S Y+ D WA+G + EM +G P F
Sbjct: 200 GTPEYLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Score = 30.4 bits (67), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 13/83 (15%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHD- 100
++ ++ +G G FG V ++ETG A+K+++ Q V LK++EH
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQK------------VVKLKQIEHTL 89
Query: 101 NIVRLLDVLTTGRYVYLVFEYLD 123
N R+L + V L F + D
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKD 112
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 30.8 bits (68), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 146 GSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
G+P Y APE I S Y+ D WA+G + EM +G P F
Sbjct: 201 GTPEYLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 13/83 (15%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHD- 100
++ ++ +G G FG V + ETG A+K+++ Q V LK++EH
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQK------------VVKLKQIEHTL 90
Query: 101 NIVRLLDVLTTGRYVYLVFEYLD 123
N R+L + V L F + D
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKD 113
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 30.8 bits (68), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 146 GSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
G+P Y APE I S Y+ D WA+G + EM +G P F
Sbjct: 201 GTPEYLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 13/83 (15%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHD- 100
++ ++ +G G FG V + ETG A+K+++ Q V LK++EH
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQK------------VVKLKQIEHTL 90
Query: 101 NIVRLLDVLTTGRYVYLVFEYLD 123
N R+L + V L F + D
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKD 113
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 30.8 bits (68), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 146 GSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
G+P Y APE I S Y+ D WA+G + EM +G P F
Sbjct: 200 GTPEYLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Score = 30.4 bits (67), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 13/83 (15%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHD- 100
++ ++ +G G FG V ++ETG A+K+++ Q V LK++EH
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQK------------VVKLKQIEHTL 89
Query: 101 NIVRLLDVLTTGRYVYLVFEYLD 123
N R+L + V L F + D
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKD 112
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 30.8 bits (68), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 146 GSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
G+P Y APE I S Y+ D WA+G + EM +G P F
Sbjct: 201 GTPEYLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 13/83 (15%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHD- 100
++ ++ +G G FG V ++ETG A+K+++ Q V LK++EH
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQK------------VVKLKQIEHTL 90
Query: 101 NIVRLLDVLTTGRYVYLVFEYLD 123
N R+L + L F + D
Sbjct: 91 NEKRILQAVNFPFLTKLEFSFKD 113
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 30.8 bits (68), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 146 GSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
G+P Y APE I S Y+ D WA+G + EM +G P F
Sbjct: 201 GTPEYLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 13/83 (15%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHD- 100
++ ++ +G G FG V ++ETG A+K+++ Q V LK++EH
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQK------------VVKLKQIEHTL 90
Query: 101 NIVRLLDVLTTGRYVYLVFEYLD 123
N R+L + L F + D
Sbjct: 91 NEKRILQAVNFPFLTKLEFSFKD 113
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 30.8 bits (68), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 146 GSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
G+P Y APE I S Y+ D WA+G + EM +G P F
Sbjct: 201 GTPEYLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 13/83 (15%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHD- 100
++ ++ +G G FG V + ETG A+K+++ Q V LK++EH
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQK------------VVKLKQIEHTL 90
Query: 101 NIVRLLDVLTTGRYVYLVFEYLD 123
N R+L + V L F + D
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKD 113
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 30.8 bits (68), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 146 GSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
G+P Y APE I S Y+ D WA+G + EM +G P F
Sbjct: 221 GTPEYLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
Score = 26.9 bits (58), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 13/83 (15%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHD- 100
+ ++ +G G FG V + E+G A+K+++ Q V LK++EH
Sbjct: 63 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK------------VVKLKQIEHTL 110
Query: 101 NIVRLLDVLTTGRYVYLVFEYLD 123
N R+L + V L F + D
Sbjct: 111 NEKRILQAVNFPFLVKLEFSFKD 133
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 30.8 bits (68), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 44/81 (54%), Gaps = 9/81 (11%)
Query: 49 IGQGVFGEV--YKCLNLETGKK-----VAIKMINIQNEPEGVPSYLIAGVSLLKEL-EHD 100
+G+G FG+V + + ++ K VA+KM+ + E S L++ + ++K + +H
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLK-DDATEKDLSDLVSEMEMMKMIGKHK 147
Query: 101 NIVRLLDVLTTGRYVYLVFEY 121
NI+ LL T +Y++ EY
Sbjct: 148 NIINLLGACTQDGPLYVIVEY 168
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 30.8 bits (68), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 146 GSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
G+P Y APE I S Y+ D WA+G + EM +G P F
Sbjct: 200 GTPEYLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Score = 27.7 bits (60), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 13/83 (15%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHD- 100
++ ++ +G G FG V + ETG A+K+++ Q V LK++EH
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQK------------VVKLKQIEHTL 89
Query: 101 NIVRLLDVLTTGRYVYLVFEYLD 123
N R+L + V L + + D
Sbjct: 90 NEKRILQAVNFPFLVKLEYSFKD 112
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 30.8 bits (68), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 146 GSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
G+P Y APE I S Y+ D WA+G + EM +G P F
Sbjct: 200 GTPEYLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Score = 30.4 bits (67), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 13/83 (15%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHD- 100
++ ++ +G G FG V ++ETG A+K+++ Q V LK++EH
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQK------------VVKLKQIEHTL 89
Query: 101 NIVRLLDVLTTGRYVYLVFEYLD 123
N R+L + V L F + D
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKD 112
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 30.8 bits (68), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 146 GSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
G+P Y APE I S Y+ D WA+G + EM +G P F
Sbjct: 200 GTPEYLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Score = 30.4 bits (67), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 13/83 (15%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHD- 100
++ ++ +G G FG V ++ETG A+K+++ Q V LK++EH
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQK------------VVKLKQIEHTL 89
Query: 101 NIVRLLDVLTTGRYVYLVFEYLD 123
N R+L + V L F + D
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKD 112
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 30.8 bits (68), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 9/97 (9%)
Query: 44 KVVEKIGQGVFGEVYKC----LNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEH 99
K + ++G+G FG V C L TG VA+K + + P+ + + +LK L
Sbjct: 14 KYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQ-HSGPDQQRDFQRE-IQILKALHS 71
Query: 100 DNIVRLLDV-LTTGRY-VYLVFEYLDLD-LGSFIRKH 133
D IV+ V GR + LV EYL L F+++H
Sbjct: 72 DFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRH 108
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 30.8 bits (68), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 146 GSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
G+P Y APE I S Y+ D WA+G + EM +G P F
Sbjct: 201 GTPEYLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 13/83 (15%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHD- 100
++ ++ +G G FG V ++ETG A+K+++ Q V LK++EH
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQK------------VVKLKQIEHTL 90
Query: 101 NIVRLLDVLTTGRYVYLVFEYLD 123
N R+L + L F + D
Sbjct: 91 NEKRILQAVNFPFLTKLEFSFKD 113
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 30.8 bits (68), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 146 GSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
G+P Y APE I S Y+ D WA+G + EM +G P F
Sbjct: 200 GTPEYLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Score = 27.7 bits (60), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 13/83 (15%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHD- 100
++ ++ +G G FG V + ETG A+K+++ Q V LK++EH
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQK------------VVKLKQIEHTL 89
Query: 101 NIVRLLDVLTTGRYVYLVFEYLD 123
N R+L + V L + + D
Sbjct: 90 NEKRILQAVNFPFLVKLEYSFKD 112
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 30.8 bits (68), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 45/97 (46%), Gaps = 9/97 (9%)
Query: 44 KVVEKIGQGVFGEVYKC----LNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEH 99
K + ++G+G FG V C L TG VA+K +Q+ + +LK L
Sbjct: 13 KYISQLGKGNFGSVELCRYDPLGDNTGALVAVK--QLQHSGPDQQRDFQREIQILKALHS 70
Query: 100 DNIVRLLDV-LTTGRY-VYLVFEYLDLD-LGSFIRKH 133
D IV+ V GR + LV EYL L F+++H
Sbjct: 71 DFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRH 107
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 30.8 bits (68), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 146 GSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
G+P Y APE I S Y+ D WA+G + EM +G P F
Sbjct: 201 GTPEYLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 30.8 bits (68), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 20/97 (20%)
Query: 49 IGQGVFGEV-----YKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELE----- 98
+G G FG+V Y + + VA+KM+ ++L +L+ EL+
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPS-------AHLTEREALMSELKVLSYL 106
Query: 99 --HDNIVRLLDVLTTGRYVYLVFEYLDL-DLGSFIRK 132
H NIV LL T G ++ EY DL +F+R+
Sbjct: 107 GNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRR 143
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 30.8 bits (68), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 20/97 (20%)
Query: 49 IGQGVFGEV-----YKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELE----- 98
+G G FG+V Y + + VA+KM+ ++L +L+ EL+
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPS-------AHLTEREALMSELKVLSYL 106
Query: 99 --HDNIVRLLDVLTTGRYVYLVFEYLDL-DLGSFIRK 132
H NIV LL T G ++ EY DL +F+R+
Sbjct: 107 GNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRR 143
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 30.8 bits (68), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 146 GSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
G+P Y APE I S Y+ D WA+G + EM +G P F
Sbjct: 200 GTPEYLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Score = 26.9 bits (58), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 13/83 (15%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHD- 100
+ ++ +G G FG V + E+G A+K+++ Q V LK++EH
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK------------VVKLKQIEHTL 89
Query: 101 NIVRLLDVLTTGRYVYLVFEYLD 123
N R+L + V L F + D
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKD 112
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 30.8 bits (68), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 20/97 (20%)
Query: 49 IGQGVFGEV-----YKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELE----- 98
+G G FG+V Y + + VA+KM+ +P ++L +L+ EL+
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKML----KPS---AHLTEREALMSELKVLSYL 101
Query: 99 --HDNIVRLLDVLTTGRYVYLVFEYLDL-DLGSFIRK 132
H NIV LL T G ++ EY DL +F+R+
Sbjct: 102 GNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRR 138
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 30.8 bits (68), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 146 GSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
G+P Y APE I S Y+ D WA+G + EM +G P F
Sbjct: 200 GTPEYLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Score = 27.7 bits (60), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 13/83 (15%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHD- 100
++ ++ +G G FG V + ETG A+K+++ Q V LK++EH
Sbjct: 42 QFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQK------------VVKLKQIEHTL 89
Query: 101 NIVRLLDVLTTGRYVYLVFEYLD 123
N R+L + V L + + D
Sbjct: 90 NEKRILQAVNFPFLVKLEYSFKD 112
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 30.8 bits (68), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGK-PLFPCGKKDHLSLIVRYFTALTNYLV 207
Y +PE R++ + YS D+W++G EM G+ P+ P K+ + F L +Y+V
Sbjct: 169 YMSPE-RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFE-LLDYIV 226
Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/87 (21%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 37 KVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKE 96
++KD +++ + ++G G G V+K + +G +A K+I+++ +P + + +I + +L E
Sbjct: 2 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKP-AIRNQIIRELQVLHE 60
Query: 97 LEHDNIVRLLDVLTTGRYVYLVFEYLD 123
IV + + + E++D
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMD 87
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 30.8 bits (68), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 146 GSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
G+P Y APE I S Y+ D WA+G + EM +G P F
Sbjct: 201 GTPEYLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 13/83 (15%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHD- 100
++ ++ +G G FG V + ETG A+K+++ Q V LK++EH
Sbjct: 43 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQK------------VVKLKQIEHTL 90
Query: 101 NIVRLLDVLTTGRYVYLVFEYLD 123
N R+L + V L F + D
Sbjct: 91 NEKRILQAVNFPFLVKLEFSFKD 113
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 30.8 bits (68), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 146 GSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
G+P Y APE I S Y+ D WA+G + EM +G P F
Sbjct: 221 GTPEYLAPEI-ILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 38/83 (45%), Gaps = 13/83 (15%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHD- 100
++ ++ +G G FG V + ETG A+K+++ Q V LK++EH
Sbjct: 63 QFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQK------------VVKLKQIEHTL 110
Query: 101 NIVRLLDVLTTGRYVYLVFEYLD 123
N R+L + V L F + D
Sbjct: 111 NEKRILQAVNFPFLVKLEFSFKD 133
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 30.8 bits (68), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGK-PLFPCGKKD 190
Y +PE R++ + YS D+W++G EM G+ P+ P K+
Sbjct: 196 YMSPE-RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE 237
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/91 (20%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 33 EQMEKVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVS 92
+++ ++KD +++ + ++G G G V+K + +G +A K+I+++ +P + + +I +
Sbjct: 25 QKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKP-AIRNQIIRELQ 83
Query: 93 LLKELEHDNIVRLLDVLTTGRYVYLVFEYLD 123
+L E IV + + + E++D
Sbjct: 84 VLHECNSPYIVGFYGAFYSDGEISICMEHMD 114
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 30.8 bits (68), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 146 GSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
G+P Y APE + +S D+W++GCI ++ GKP F
Sbjct: 188 GTPNYIAPEVLCKKG-HSFEVDIWSLGCILYTLLVGKPPF 226
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 30.4 bits (67), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 44 KVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIV 103
++ E IG+G FG+VY +VAI++I+I+ + E V ++ H+N+V
Sbjct: 36 EIGELIGKGRFGQVYHG---RWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVV 92
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 30.4 bits (67), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKM 73
N++V +KIG G FGE+ NL T + VAIK+
Sbjct: 31 NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKL 62
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 30.4 bits (67), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 38 VKDWNYKVVEKIGQGVFGEVYKCLNLETGKK----VAIKMINIQNEPEGVPSYLIAGVSL 93
+K+ +K ++ + G FG VYK L + G+K VAIK + P+ L +
Sbjct: 12 LKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY-V 70
Query: 94 LKELEHDNIVRLLDVLTTGRYVYLVFEYLDLD-LGSFIRKH 133
+ +++ ++ RLL + T V L+ + + L ++R+H
Sbjct: 71 MASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREH 110
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 30.4 bits (67), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGK-PLFPCGKKD 190
Y APE R++ + YS D+W++G E+ G+ P+ P K+
Sbjct: 179 YMAPE-RLQGTHYSVQSDIWSMGLSLVELAVGRYPIPPPDAKE 220
Score = 28.1 bits (61), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/87 (21%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 37 KVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKE 96
++KD +++ + ++G G G V K + +G +A K+I+++ +P + + +I + +L E
Sbjct: 12 ELKDDDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKP-AIRNQIIRELQVLHE 70
Query: 97 LEHDNIVRLLDVLTTGRYVYLVFEYLD 123
IV + + + E++D
Sbjct: 71 CNSPYIVGFYGAFYSDGEISICMEHMD 97
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 30.4 bits (67), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 44/81 (54%), Gaps = 9/81 (11%)
Query: 49 IGQGVFGEV--YKCLNLETGK-----KVAIKMINIQNEPEGVPSYLIAGVSLLKEL-EHD 100
+G+G FG+V + + ++ K VA+KM+ + E S L++ + ++K + +H
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLK-DDATEKDLSDLVSEMEMMKMIGKHK 93
Query: 101 NIVRLLDVLTTGRYVYLVFEY 121
NI+ LL T +Y++ EY
Sbjct: 94 NIINLLGACTQDGPLYVIVEY 114
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 30.4 bits (67), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 44/81 (54%), Gaps = 9/81 (11%)
Query: 49 IGQGVFGEV--YKCLNLETGK-----KVAIKMINIQNEPEGVPSYLIAGVSLLKEL-EHD 100
+G+G FG+V + + ++ K VA+KM+ + E S L++ + ++K + +H
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLK-DDATEKDLSDLVSEMEMMKMIGKHK 88
Query: 101 NIVRLLDVLTTGRYVYLVFEY 121
NI+ LL T +Y++ EY
Sbjct: 89 NIINLLGACTQDGPLYVIVEY 109
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 30.4 bits (67), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKM 73
N++V +KIG G FGE+ NL T + VAIK+
Sbjct: 10 NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKL 41
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 30.4 bits (67), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGK-PLFPCGKKD 190
Y +PE R++ + YS D+W++G EM G+ P+ P K+
Sbjct: 169 YMSPE-RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE 210
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/87 (21%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 37 KVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKE 96
++KD +++ + ++G G G V+K + +G +A K+I+++ +P + + +I + +L E
Sbjct: 2 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKP-AIRNQIIRELQVLHE 60
Query: 97 LEHDNIVRLLDVLTTGRYVYLVFEYLD 123
IV + + + E++D
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMD 87
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 30.4 bits (67), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGK-PLFPCGKKD 190
Y +PE R++ + YS D+W++G EM G+ P+ P K+
Sbjct: 169 YMSPE-RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE 210
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/87 (21%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 37 KVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKE 96
++KD +++ + ++G G G V+K + +G +A K+I+++ +P + + +I + +L E
Sbjct: 2 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKP-AIRNQIIRELQVLHE 60
Query: 97 LEHDNIVRLLDVLTTGRYVYLVFEYLD 123
IV + + + E++D
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMD 87
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 30.4 bits (67), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 50/101 (49%), Gaps = 7/101 (6%)
Query: 38 VKDWNYKVVEKIGQGVFGEVYKCLNLETGKK----VAIKMINIQNEPEGVPSYLIAGVSL 93
+K+ +K ++ + G FG VYK L + G+K VAIK + P+ L +
Sbjct: 19 LKETEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY-V 77
Query: 94 LKELEHDNIVRLLDVLTTGRYVYLVFEYLDLD-LGSFIRKH 133
+ +++ ++ RLL + T V L+ + + L ++R+H
Sbjct: 78 MASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYVREH 117
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 30.4 bits (67), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKM 73
N++V +KIG G FGE+ NL T + VAIK+
Sbjct: 10 NFRVGKKIGCGNFGELRLGKNLYTNEYVAIKL 41
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 30.4 bits (67), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGK-PLFPCGKKD 190
Y +PE R++ + YS D+W++G EM G+ P+ P K+
Sbjct: 169 YMSPE-RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE 210
Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/87 (21%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 37 KVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKE 96
++KD +++ + ++G G G V+K + +G +A K+I+++ +P + + +I + +L E
Sbjct: 2 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKP-AIRNQIIRELQVLHE 60
Query: 97 LEHDNIVRLLDVLTTGRYVYLVFEYLD 123
IV + + + E++D
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMD 87
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 30.4 bits (67), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 44/81 (54%), Gaps = 9/81 (11%)
Query: 49 IGQGVFGEV--YKCLNLETGK-----KVAIKMINIQNEPEGVPSYLIAGVSLLKEL-EHD 100
+G+G FG+V + + ++ K VA+KM+ + E S L++ + ++K + +H
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLK-DDATEKDLSDLVSEMEMMKMIGKHK 90
Query: 101 NIVRLLDVLTTGRYVYLVFEY 121
NI+ LL T +Y++ EY
Sbjct: 91 NIINLLGACTQDGPLYVIVEY 111
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 30.4 bits (67), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGK-PLFPCGKKD 190
Y +PE R++ + YS D+W++G EM G+ P+ P K+
Sbjct: 169 YMSPE-RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE 210
Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/87 (21%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 37 KVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKE 96
++KD +++ + ++G G G V+K + +G +A K+I+++ +P + + +I + +L E
Sbjct: 2 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKP-AIRNQIIRELQVLHE 60
Query: 97 LEHDNIVRLLDVLTTGRYVYLVFEYLD 123
IV + + + E++D
Sbjct: 61 CNSPYIVGFYGAFYSDGEISICMEHMD 87
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 30.4 bits (67), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 44/81 (54%), Gaps = 9/81 (11%)
Query: 49 IGQGVFGEV--YKCLNLETGK-----KVAIKMINIQNEPEGVPSYLIAGVSLLKEL-EHD 100
+G+G FG+V + + ++ K VA+KM+ + E S L++ + ++K + +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK-DDATEKDLSDLVSEMEMMKMIGKHK 101
Query: 101 NIVRLLDVLTTGRYVYLVFEY 121
NI+ LL T +Y++ EY
Sbjct: 102 NIITLLGACTQDGPLYVIVEY 122
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 30.4 bits (67), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 146 GSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
G+P Y APE I S Y+ D WA+G + EM +G P F
Sbjct: 200 GTPEYLAPEIII-SKGYNKAVDWWALGVLIYEMAAGYPPF 238
Score = 26.9 bits (58), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 13/83 (15%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHD- 100
+ ++ +G G FG V + E+G A+K+++ Q V LK++EH
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK------------VVKLKQIEHTL 89
Query: 101 NIVRLLDVLTTGRYVYLVFEYLD 123
N R+L + V L F + D
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKD 112
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 30.4 bits (67), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGK-PLFPCGKKD 190
Y +PE R++ + YS D+W++G EM G+ P+ P K+
Sbjct: 231 YMSPE-RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE 272
Score = 30.4 bits (67), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 19/91 (20%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 33 EQMEKVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVS 92
+++ ++KD +++ + ++G G G V+K + +G +A K+I+++ +P + + +I +
Sbjct: 60 QKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKP-AIRNQIIRELQ 118
Query: 93 LLKELEHDNIVRLLDVLTTGRYVYLVFEYLD 123
+L E IV + + + E++D
Sbjct: 119 VLHECNSPYIVGFYGAFYSDGEISICMEHMD 149
>pdb|1MRO|A Chain A, Methyl-Coenzyme M Reductase
pdb|1MRO|D Chain D, Methyl-Coenzyme M Reductase
Length = 548
Score = 30.4 bits (67), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 66 GKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRL-LDVLTTGRYVY 116
G + ++ +NEP GVP +A + + +++ VR+ LDV+ TG +Y
Sbjct: 263 GTYLPVRXARGENEPGGVPFGYLADICQSSRVNYEDPVRVSLDVVATGAMLY 314
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 30.4 bits (67), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 4/75 (5%)
Query: 29 TNGSEQMEKVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLI 88
++ S+ E + D V ++IG G FG VYK + VA+KM+N+
Sbjct: 2 SDSSDDWE-IPDGQITVGQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFK 57
Query: 89 AGVSLLKELEHDNIV 103
V +L++ H NI+
Sbjct: 58 NEVGVLRKTRHVNIL 72
>pdb|3POT|A Chain A, Structural Analysis Of A Ni(Iii)-Methyl Species In
Methyl-Coenzyme M Reductase From Methanothermobacter
Marburgensis
pdb|3POT|D Chain D, Structural Analysis Of A Ni(Iii)-Methyl Species In
Methyl-Coenzyme M Reductase From Methanothermobacter
Marburgensis
Length = 550
Score = 30.4 bits (67), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 66 GKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRL-LDVLTTGRYVY 116
G + ++ +NEP GVP +A + + +++ VR+ LDV+ TG +Y
Sbjct: 264 GTYLPVRXARGENEPGGVPFGYLADICQSSRVNYEDPVRVSLDVVATGAMLY 315
>pdb|1HBM|A Chain A, Methyl-Coenzyme M Reductase Enzyme Product Complex
pdb|1HBM|D Chain D, Methyl-Coenzyme M Reductase Enzyme Product Complex
pdb|1HBN|A Chain A, Methyl-Coenzyme M Reductase
pdb|1HBN|D Chain D, Methyl-Coenzyme M Reductase
pdb|1HBO|A Chain A, Methyl-Coenzyme M Reductase Mcr-Red1-Silent
pdb|1HBO|D Chain D, Methyl-Coenzyme M Reductase Mcr-Red1-Silent
pdb|1HBU|A Chain A, Methyl-Coenzyme M Reductase In The Mcr-Red1-Silent State
In Complex With Coenzyme M
pdb|1HBU|D Chain D, Methyl-Coenzyme M Reductase In The Mcr-Red1-Silent State
In Complex With Coenzyme M
pdb|3M1V|A Chain A, Structural Insight Into Methyl-Coenzyme M Reductase
Chemistry Using Coenzyme B Analogues
pdb|3M1V|D Chain D, Structural Insight Into Methyl-Coenzyme M Reductase
Chemistry Using Coenzyme B Analogues
pdb|3M2R|A Chain A, Structural Insight Into Methyl-Coenzyme M Reductase
Chemistry Using Coenzyme B Analogues
pdb|3M2R|D Chain D, Structural Insight Into Methyl-Coenzyme M Reductase
Chemistry Using Coenzyme B Analogues
pdb|3M2U|A Chain A, Structural Insight Into Methyl-Coenzyme M Reductase
Chemistry Using Coenzyme B Analogues
pdb|3M2U|D Chain D, Structural Insight Into Methyl-Coenzyme M Reductase
Chemistry Using Coenzyme B Analogues
pdb|3M2V|A Chain A, Structural Insight Into Methyl-Coenzyme M Reductase
Chemistry Using Coenzyme B Analogues
pdb|3M2V|D Chain D, Structural Insight Into Methyl-Coenzyme M Reductase
Chemistry Using Coenzyme B Analogues
pdb|3M30|A Chain A, Structural Insight Into Methyl-Coenzyme M Reductase
Chemistry Using Coenzyme B Analogues
pdb|3M30|D Chain D, Structural Insight Into Methyl-Coenzyme M Reductase
Chemistry Using Coenzyme B Analogues
pdb|3M32|A Chain A, Structural Insight Into Methyl-Coenzyme M Reductase
Chemistry Using Coenzyme B Analogues
pdb|3M32|D Chain D, Structural Insight Into Methyl-Coenzyme M Reductase
Chemistry Using Coenzyme B Analogues
Length = 549
Score = 30.4 bits (67), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 66 GKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRL-LDVLTTGRYVY 116
G + ++ +NEP GVP +A + + +++ VR+ LDV+ TG +Y
Sbjct: 263 GTYLPVRXARGENEPGGVPFGYLADICQSSRVNYEDPVRVSLDVVATGAMLY 314
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 30.4 bits (67), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 9/70 (12%)
Query: 37 KVKDWNYKVVEKIGQGVFGEVYKCLNLETGK---KVAIKMINIQNEPEGVPSYLIAGVSL 93
++ D V ++IG G FG VYK GK VA+KM+N+ V +
Sbjct: 31 EIPDGQITVGQRIGSGSFGTVYK------GKWHGDVAVKMLNVTAPTPQQLQAFKNEVGV 84
Query: 94 LKELEHDNIV 103
L++ H NI+
Sbjct: 85 LRKTRHVNIL 94
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 30.4 bits (67), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 9/70 (12%)
Query: 37 KVKDWNYKVVEKIGQGVFGEVYKCLNLETGK---KVAIKMINIQNEPEGVPSYLIAGVSL 93
++ D V ++IG G FG VYK GK VA+KM+N+ V +
Sbjct: 24 EIPDGQITVGQRIGSGSFGTVYK------GKWHGDVAVKMLNVTAPTPQQLQAFKNEVGV 77
Query: 94 LKELEHDNIV 103
L++ H NI+
Sbjct: 78 LRKTRHVNIL 87
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 30.4 bits (67), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 37 KVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKE 96
++ D V ++IG G FG VYK + VA+KM+N+ V +L++
Sbjct: 6 EIPDGQITVGQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK 62
Query: 97 LEHDNIV 103
H NI+
Sbjct: 63 TRHVNIL 69
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 30.4 bits (67), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 8/80 (10%)
Query: 46 VEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSY--LIAGVSLLKELEHDNIV 103
V++IG G FG V+ L KVAIK I EG S I ++ +L H +V
Sbjct: 12 VQEIGSGQFGLVHLGYWLNK-DKVAIKTIR-----EGAMSEEDFIEEAEVMMKLSHPKLV 65
Query: 104 RLLDVLTTGRYVYLVFEYLD 123
+L V + LVFE+++
Sbjct: 66 QLYGVCLEQAPICLVFEFME 85
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 30.4 bits (67), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 3/37 (8%)
Query: 36 EKVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIK 72
E ++++K + IG GVFG+VYK + L G KVA+K
Sbjct: 36 EATNNFDHKFL--IGHGVFGKVYKGV-LRDGAKVALK 69
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 30.4 bits (67), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 146 GSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
G+P Y APE + +S D+W++GCI ++ GKP F
Sbjct: 204 GTPNYIAPEVLCKKG-HSFEVDIWSLGCILYTLLVGKPPF 242
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 30.4 bits (67), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 146 GSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
G+P Y APE + +S D+W++GCI ++ GKP F
Sbjct: 204 GTPNYIAPEVLCKKG-HSFEVDIWSLGCILYTLLVGKPPF 242
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 30.4 bits (67), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 9/70 (12%)
Query: 37 KVKDWNYKVVEKIGQGVFGEVYKCLNLETGK---KVAIKMINIQNEPEGVPSYLIAGVSL 93
++ D V ++IG G FG VYK GK VA+KM+N+ V +
Sbjct: 32 EIPDGQITVGQRIGSGSFGTVYK------GKWHGDVAVKMLNVTAPTPQQLQAFKNEVGV 85
Query: 94 LKELEHDNIV 103
L++ H NI+
Sbjct: 86 LRKTRHVNIL 95
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 30.4 bits (67), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 9/70 (12%)
Query: 37 KVKDWNYKVVEKIGQGVFGEVYKCLNLETGK---KVAIKMINIQNEPEGVPSYLIAGVSL 93
++ D V ++IG G FG VYK GK VA+KM+N+ V +
Sbjct: 32 EIPDGQITVGQRIGSGSFGTVYK------GKWHGDVAVKMLNVTAPTPQQLQAFKNEVGV 85
Query: 94 LKELEHDNIV 103
L++ H NI+
Sbjct: 86 LRKTRHVNIL 95
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 30.0 bits (66), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 8/80 (10%)
Query: 46 VEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSY--LIAGVSLLKELEHDNIV 103
V++IG G FG V+ L KVAIK I EG S I ++ +L H +V
Sbjct: 10 VQEIGSGQFGLVHLGYWLNK-DKVAIKTIR-----EGAMSEEDFIEEAEVMMKLSHPKLV 63
Query: 104 RLLDVLTTGRYVYLVFEYLD 123
+L V + LVFE+++
Sbjct: 64 QLYGVCLEQAPICLVFEFME 83
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 30.0 bits (66), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 8/80 (10%)
Query: 46 VEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSY--LIAGVSLLKELEHDNIV 103
V++IG G FG V+ L KVAIK I EG S I ++ +L H +V
Sbjct: 15 VQEIGSGQFGLVHLGYWLNK-DKVAIKTIR-----EGAMSEEDFIEEAEVMMKLSHPKLV 68
Query: 104 RLLDVLTTGRYVYLVFEYLD 123
+L V + LVFE+++
Sbjct: 69 QLYGVCLEQAPICLVFEFME 88
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 30.0 bits (66), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 8/80 (10%)
Query: 46 VEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSY--LIAGVSLLKELEHDNIV 103
V++IG G FG V+ L KVAIK I EG S I ++ +L H +V
Sbjct: 12 VQEIGSGQFGLVHLGYWLNK-DKVAIKTIR-----EGAMSEEDFIEEAEVMMKLSHPKLV 65
Query: 104 RLLDVLTTGRYVYLVFEYLD 123
+L V + LVFE+++
Sbjct: 66 QLYGVCLEQAPICLVFEFME 85
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed
With Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed
With Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed
With Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed
With Kinase Pto
Length = 327
Score = 30.0 bits (66), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 3/37 (8%)
Query: 36 EKVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIK 72
E ++++K + IG GVFG+VYK + L G KVA+K
Sbjct: 36 EATNNFDHKFL--IGHGVFGKVYKGV-LRDGAKVALK 69
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 30.0 bits (66), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Query: 146 GSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
G+P Y APE + +S D+W++GCI ++ GKP F
Sbjct: 204 GTPNYIAPEVLCKKG-HSFEVDIWSLGCILYTLLVGKPPF 242
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 30.0 bits (66), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 37 KVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKE 96
++ D V ++IG G FG VYK + VA+KM+N+ V +L++
Sbjct: 4 EIPDGQITVGQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK 60
Query: 97 LEHDNIV 103
H NI+
Sbjct: 61 TRHVNIL 67
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 30.0 bits (66), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 10/78 (12%)
Query: 29 TNGSEQMEKVKDWNYKVVEKIGQGVFGEVYKCLNLETGK---KVAIKMINIQNEPEGVPS 85
++ S+ E + D V ++IG G FG VYK GK VA+KM+N+
Sbjct: 2 SDSSDDWE-IPDGQITVGQRIGSGSFGTVYK------GKWHGDVAVKMLNVTAPTPQQLQ 54
Query: 86 YLIAGVSLLKELEHDNIV 103
V +L++ H NI+
Sbjct: 55 AFKNEVGVLRKTRHVNIL 72
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 30.0 bits (66), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 37 KVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKE 96
++ D V ++IG G FG VYK + VA+KM+N+ V +L++
Sbjct: 4 EIPDGQITVGQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK 60
Query: 97 LEHDNIV 103
H NI+
Sbjct: 61 TRHVNIL 67
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 30.0 bits (66), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Query: 37 KVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKE 96
++ D V ++IG G FG VYK + VA+KM+N+ V +L++
Sbjct: 4 EIPDGQITVGQRIGSGSFGTVYKG---KWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK 60
Query: 97 LEHDNIV 103
H NI+
Sbjct: 61 TRHVNIL 67
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 30.0 bits (66), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKM-INIQNEPEGVPSYLIAGVSLLKELEHD 100
+++ + ++G G +GEV+K + E G+ A+K ++ P+ L S K +H
Sbjct: 58 SFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHP 117
Query: 101 NIVRLLDVLTTGRYVYLVFE 120
VRL G +YL E
Sbjct: 118 CCVRLEQAWEEGGILYLQTE 137
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 30.0 bits (66), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 49 IGQGVFGEVYKCLNLETGKK-----VAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIV 103
+G+G FG+V K + VA+KM+ P + L++ ++LK++ H +++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRD-LLSEFNVLKQVNHPHVI 89
Query: 104 RLLDVLTTGRYVYLVFEYLDL-DLGSFIRK 132
+L + + L+ EY L F+R+
Sbjct: 90 KLYGACSQDGPLLLIVEYAKYGSLRGFLRE 119
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 30.0 bits (66), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 45/97 (46%), Gaps = 9/97 (9%)
Query: 44 KVVEKIGQGVFGEVYKC----LNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEH 99
K + ++G+G FG V C L TG VA+K +Q+ + +LK L
Sbjct: 10 KYISQLGKGNFGSVELCRYDPLGDNTGALVAVK--QLQHSGPDQQRDFQREIQILKALHS 67
Query: 100 DNIVRLLDV-LTTGR-YVYLVFEYLDLD-LGSFIRKH 133
D IV+ V GR + LV EYL L F+++H
Sbjct: 68 DFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRH 104
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 30.0 bits (66), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 9/70 (12%)
Query: 37 KVKDWNYKVVEKIGQGVFGEVYKCLNLETGK---KVAIKMINIQNEPEGVPSYLIAGVSL 93
++ D V ++IG G FG VYK GK VA+KM+N+ V +
Sbjct: 8 EIPDGQITVGQRIGSGSFGTVYK------GKWHGDVAVKMLNVTAPTPQQLQAFKNEVGV 61
Query: 94 LKELEHDNIV 103
L++ H NI+
Sbjct: 62 LRKTRHVNIL 71
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 30.0 bits (66), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 49 IGQGVFGEVYKCLNLETGKK-----VAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIV 103
+G+G FG+V K + VA+KM+ P + L++ ++LK++ H +++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRD-LLSEFNVLKQVNHPHVI 89
Query: 104 RLLDVLTTGRYVYLVFEYLDL-DLGSFIRK 132
+L + + L+ EY L F+R+
Sbjct: 90 KLYGACSQDGPLLLIVEYAKYGSLRGFLRE 119
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 49 IGQGVFGEVYKCLNLETGKK-----VAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIV 103
+G+G FG+V K + VA+KM+ P + L++ ++LK++ H +++
Sbjct: 31 LGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRD-LLSEFNVLKQVNHPHVI 89
Query: 104 RLLDVLTTGRYVYLVFEYLDL-DLGSFIRK 132
+L + + L+ EY L F+R+
Sbjct: 90 KLYGACSQDGPLLLIVEYAKYGSLRGFLRE 119
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 46 VEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRL 105
V++IG G FG V+ L KVAIK I + E I ++ +L H +V+L
Sbjct: 32 VQEIGSGQFGLVHLGYWLNK-DKVAIKTIKEGSMSE---DDFIEEAEVMMKLSHPKLVQL 87
Query: 106 LDVLTTGRYVYLVFEYLD 123
V + LVFE+++
Sbjct: 88 YGVCLEQAPICLVFEFME 105
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 15/73 (20%)
Query: 37 KVKDWNYKVVEKIGQGVFGEVYKCLNLETGK---KVAIKMINIQNEPEGVPSYLIA---G 90
++ D V ++IG G FG VYK GK VA+KM+N+ P P L A
Sbjct: 20 EIPDGQITVGQRIGSGSFGTVYK------GKWHGDVAVKMLNV-TAP--TPQQLQAFKNE 70
Query: 91 VSLLKELEHDNIV 103
V +L++ H NI+
Sbjct: 71 VGVLRKTRHVNIL 83
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 15/73 (20%)
Query: 37 KVKDWNYKVVEKIGQGVFGEVYKCLNLETGK---KVAIKMINIQNEPEGVPSYLIA---G 90
++ D V ++IG G FG VYK GK VA+KM+N+ P P L A
Sbjct: 20 EIPDGQITVGQRIGSGSFGTVYK------GKWHGDVAVKMLNV-TAP--TPQQLQAFKNE 70
Query: 91 VSLLKELEHDNIV 103
V +L++ H NI+
Sbjct: 71 VGVLRKTRHVNIL 83
>pdb|1QIL|A Chain A, Inactive Mutant Toxic Shock Syndrome Toxin-1 At 2.5 A
pdb|1QIL|B Chain B, Inactive Mutant Toxic Shock Syndrome Toxin-1 At 2.5 A
pdb|1QIL|C Chain C, Inactive Mutant Toxic Shock Syndrome Toxin-1 At 2.5 A
pdb|1TS3|A Chain A, H135a Mutant Of Toxic Shock Syndrome Toxin-1 From S.
Aureus
pdb|1TS3|B Chain B, H135a Mutant Of Toxic Shock Syndrome Toxin-1 From S.
Aureus
pdb|1TS3|C Chain C, H135a Mutant Of Toxic Shock Syndrome Toxin-1 From S.
Aureus
Length = 194
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 99 HDNIVRLLDVLTTGRYVYLVFEYLDLDLGSFIRKHTITSIRPHIKEVGSPYKAP 152
+DNI LLD ++G + E LD LGS K+T SI I SPY +P
Sbjct: 3 NDNIKDLLDWYSSGSDTFTNSEVLDNSLGSMRIKNTDGSISLII--FPSPYYSP 54
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/87 (21%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 37 KVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKE 96
++KD +++ + ++G G G V+K + +G +A K+I+++ +P + + +I + +L E
Sbjct: 5 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKP-AIRNQIIRELQVLHE 63
Query: 97 LEHDNIVRLLDVLTTGRYVYLVFEYLD 123
IV + + + E++D
Sbjct: 64 CNSPYIVGFYGAFYSDGEISICMEHMD 90
Score = 29.3 bits (64), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGK 181
Y +PE R++ + YS D+W++G EM G+
Sbjct: 172 YMSPE-RLQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|3TSS|A Chain A, Toxic Shock Syndrome Toxin-1 Tetramutant, P2(1) Crystal
Form
Length = 194
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 99 HDNIVRLLDVLTTGRYVYLVFEYLDLDLGSFIRKHTITSIRPHIKEVGSPYKAP 152
+DNI LLD ++G + E LD LGS K+T SI I SPY +P
Sbjct: 3 NDNIKDLLDWYSSGSDTFTNSEVLDNSLGSMRIKNTDGSISLII--FPSPYYSP 54
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 33/68 (48%), Gaps = 7/68 (10%)
Query: 146 GSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLIVRYFTALTN 204
G+P Y APE ++ +Y D WA+G + EM+ G F +D L + L +
Sbjct: 186 GTPDYIAPEI-LQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDL-----FEAILND 239
Query: 205 YLVLPCFL 212
+V P +L
Sbjct: 240 EVVYPTWL 247
>pdb|1TS5|A Chain A, I140t Mutant Of Toxic Shock Syndrome Toxin-1 From S.
Aureus
pdb|1TS5|B Chain B, I140t Mutant Of Toxic Shock Syndrome Toxin-1 From S.
Aureus
Length = 194
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 99 HDNIVRLLDVLTTGRYVYLVFEYLDLDLGSFIRKHTITSIRPHIKEVGSPYKAP 152
+DNI LLD ++G + E LD LGS K+T SI I SPY +P
Sbjct: 3 NDNIKDLLDWYSSGSDTFTNSEVLDNSLGSMRIKNTDGSISLII--FPSPYYSP 54
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/91 (20%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Query: 33 EQMEKVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVS 92
+ ME ++ +++G+G F V +C++ TG++ A K + + + + ++ ++
Sbjct: 21 QSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIA 80
Query: 93 LLKELEHD--NIVRLLDVLTTGRYVYLVFEY 121
+L EL ++ L +V + L+ EY
Sbjct: 81 VL-ELAKSCPRVINLHEVYENTSEIILILEY 110
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 146 GSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
G+P Y APE I S Y+ D WA+G + +M +G P F
Sbjct: 200 GTPEYLAPEI-ILSKGYNKAVDWWALGVLIYQMAAGYPPF 238
Score = 26.9 bits (58), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 13/83 (15%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHD- 100
+ ++ +G G FG V + E+G A+K+++ Q V LK++EH
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK------------VVKLKQIEHTL 89
Query: 101 NIVRLLDVLTTGRYVYLVFEYLD 123
N R+L + V L F + D
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKD 112
>pdb|1AW7|A Chain A, Q136a Mutant Of Toxic Shock Syndrome Toxin-1 From S.
Aureus
pdb|1AW7|B Chain B, Q136a Mutant Of Toxic Shock Syndrome Toxin-1 From S.
Aureus
pdb|1AW7|C Chain C, Q136a Mutant Of Toxic Shock Syndrome Toxin-1 From S.
Aureus
pdb|1AW7|D Chain D, Q136a Mutant Of Toxic Shock Syndrome Toxin-1 From S.
Aureus
Length = 194
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 99 HDNIVRLLDVLTTGRYVYLVFEYLDLDLGSFIRKHTITSIRPHIKEVGSPYKAP 152
+DNI LLD ++G + E LD LGS K+T SI I SPY +P
Sbjct: 3 NDNIKDLLDWYSSGSDTFTNSEVLDNSLGSMRIKNTDGSISLII--FPSPYYSP 54
>pdb|2QIL|A Chain A, Toxic Shock Syndrome Toxin-1 At 2.07 A Resolution
pdb|2QIL|B Chain B, Toxic Shock Syndrome Toxin-1 At 2.07 A Resolution
pdb|2QIL|C Chain C, Toxic Shock Syndrome Toxin-1 At 2.07 A Resolution
pdb|2TSS|A Chain A, Toxic Shock Syndrome Toxin-1 From Staphylococcus Aureus:
Orthorhombicc222(1) Crystal Form
pdb|2TSS|B Chain B, Toxic Shock Syndrome Toxin-1 From Staphylococcus Aureus:
Orthorhombicc222(1) Crystal Form
pdb|2TSS|C Chain C, Toxic Shock Syndrome Toxin-1 From Staphylococcus Aureus:
Orthorhombicc222(1) Crystal Form
pdb|5TSS|A Chain A, Toxic Shock Syndrome Toxin-1: Orthorhombic P222(1) Crystal
Form
pdb|5TSS|B Chain B, Toxic Shock Syndrome Toxin-1: Orthorhombic P222(1) Crystal
Form
pdb|2IJ0|A Chain A, Structural Basis Of T Cell Specificity And Activation By
The Bacterial Superantigen Toxic Shock Syndrome Toxin-1
pdb|2IJ0|B Chain B, Structural Basis Of T Cell Specificity And Activation By
The Bacterial Superantigen Toxic Shock Syndrome Toxin-1
pdb|4TSS|A Chain A, Toxic Shock Syndrome Toxin-1: Tetragonal P4(1)2(1)2
Crystal Form
pdb|3MFG|A Chain A, Crystal Structure Of Toxic Shock Syndrome Toxin 1 (Tsst-1)
In Complex With The Human T Cell Receptor Beta Chain
Vbeta2.1 (Ep-8)
Length = 194
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 99 HDNIVRLLDVLTTGRYVYLVFEYLDLDLGSFIRKHTITSIRPHIKEVGSPYKAP 152
+DNI LLD ++G + E LD LGS K+T SI I SPY +P
Sbjct: 3 NDNIKDLLDWYSSGSDTFTNSEVLDNSLGSMRIKNTDGSISLII--FPSPYYSP 54
>pdb|1TS2|A Chain A, T128a Mutant Of Toxic Shock Syndrome Toxin-1 From S.
Aureus
pdb|1TS2|B Chain B, T128a Mutant Of Toxic Shock Syndrome Toxin-1 From S.
Aureus
pdb|1TS2|C Chain C, T128a Mutant Of Toxic Shock Syndrome Toxin-1 From S.
Aureus
Length = 194
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 99 HDNIVRLLDVLTTGRYVYLVFEYLDLDLGSFIRKHTITSIRPHIKEVGSPYKAP 152
+DNI LLD ++G + E LD LGS K+T SI I SPY +P
Sbjct: 3 NDNIKDLLDWYSSGSDTFTNSEVLDNSLGSMRIKNTDGSISLII--FPSPYYSP 54
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 50/95 (52%), Gaps = 10/95 (10%)
Query: 47 EKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRLL 106
E IG+G FGEV++ G++VA+K+ + + E I +L+ H+NI+ +
Sbjct: 10 ESIGKGRFGEVWR--GKWRGEEVAVKIFSSREERSWFREAEIYQTVMLR---HENILGFI 64
Query: 107 --DVLTTGRY--VYLVFEYLDL-DLGSFIRKHTIT 136
D G + ++LV +Y + L ++ ++T+T
Sbjct: 65 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVT 99
>pdb|1TS4|A Chain A, Q139k Mutant Of Toxic Shock Syndrome Toxin-1 From S.
Aureus
pdb|1TS4|B Chain B, Q139k Mutant Of Toxic Shock Syndrome Toxin-1 From S.
Aureus
Length = 194
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 99 HDNIVRLLDVLTTGRYVYLVFEYLDLDLGSFIRKHTITSIRPHIKEVGSPYKAP 152
+DNI LLD ++G + E LD LGS K+T SI I SPY +P
Sbjct: 3 NDNIKDLLDWYSSGSDTFTNSEVLDNSLGSMRIKNTDGSISLII--FPSPYYSP 54
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 50/95 (52%), Gaps = 10/95 (10%)
Query: 47 EKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRLL 106
E IG+G FGEV++ G++VA+K+ + + E I +L+ H+NI+ +
Sbjct: 9 ESIGKGRFGEVWR--GKWRGEEVAVKIFSSREERSWFREAEIYQTVMLR---HENILGFI 63
Query: 107 --DVLTTGRY--VYLVFEYLDL-DLGSFIRKHTIT 136
D G + ++LV +Y + L ++ ++T+T
Sbjct: 64 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVT 98
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 50/95 (52%), Gaps = 10/95 (10%)
Query: 47 EKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRLL 106
E IG+G FGEV++ G++VA+K+ + + E I +L+ H+NI+ +
Sbjct: 15 ESIGKGRFGEVWR--GKWRGEEVAVKIFSSREERSWFREAEIYQTVMLR---HENILGFI 69
Query: 107 --DVLTTGRY--VYLVFEYLDL-DLGSFIRKHTIT 136
D G + ++LV +Y + L ++ ++T+T
Sbjct: 70 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVT 104
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 50/95 (52%), Gaps = 10/95 (10%)
Query: 47 EKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRLL 106
E IG+G FGEV++ G++VA+K+ + + E I +L+ H+NI+ +
Sbjct: 12 ESIGKGRFGEVWR--GKWRGEEVAVKIFSSREERSWFREAEIYQTVMLR---HENILGFI 66
Query: 107 --DVLTTGRY--VYLVFEYLDL-DLGSFIRKHTIT 136
D G + ++LV +Y + L ++ ++T+T
Sbjct: 67 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVT 101
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 48 KIGQGVFGEVYKCL--NLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRL 105
K G+G FG VYK N K M++I E + + + + +H+N+V L
Sbjct: 29 KXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEE--LKQQFDQEIKVXAKCQHENLVEL 86
Query: 106 LDVLTTGRYVYLVFEY 121
L + G + LV+ Y
Sbjct: 87 LGFSSDGDDLCLVYVY 102
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 29.3 bits (64), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 50/95 (52%), Gaps = 10/95 (10%)
Query: 47 EKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRLL 106
E IG+G FGEV++ G++VA+K+ + + E I +L+ H+NI+ +
Sbjct: 35 ESIGKGRFGEVWR--GKWRGEEVAVKIFSSREERSWFREAEIYQTVMLR---HENILGFI 89
Query: 107 --DVLTTGRY--VYLVFEYLDL-DLGSFIRKHTIT 136
D G + ++LV +Y + L ++ ++T+T
Sbjct: 90 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVT 124
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 50/95 (52%), Gaps = 10/95 (10%)
Query: 47 EKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRLL 106
E IG+G FGEV++ G++VA+K+ + + E I +L+ H+NI+ +
Sbjct: 48 ESIGKGRFGEVWR--GKWRGEEVAVKIFSSREERSWFREAEIYQTVMLR---HENILGFI 102
Query: 107 --DVLTTGRY--VYLVFEYLDL-DLGSFIRKHTIT 136
D G + ++LV +Y + L ++ ++T+T
Sbjct: 103 AADNKDNGTWTQLWLVSDYHEHGSLFDYLNRYTVT 137
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 34 QMEKVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSL 93
Q ++ + +V + +G F VY+ ++ +G++ A+K + + NE E + +I V
Sbjct: 21 QTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRL-LSNEEEKNRA-IIQEVCF 78
Query: 94 LKELE-HDNIVRLLDVLTTGR 113
+K+L H NIV+ + G+
Sbjct: 79 MKKLSGHPNIVQFCSAASIGK 99
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLS 193
Y +PE + R DV+++GC+ E+++G+P F D ++
Sbjct: 185 YLSPE-QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVA 228
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 146 GSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
G+P Y APE +R Y D WA+G + EM++G+ F
Sbjct: 168 GTPNYIAPEI-LRGEDYGFSVDWWALGVLMFEMMAGRSPF 206
>pdb|3JTW|A Chain A, Crystal Structure Of Putative Dihydrofolate Reductase
(Yp_805003.1) From Pediococcus Pentosaceus Atcc 25745 At
1.90 A Resolution
pdb|3JTW|B Chain B, Crystal Structure Of Putative Dihydrofolate Reductase
(Yp_805003.1) From Pediococcus Pentosaceus Atcc 25745 At
1.90 A Resolution
Length = 178
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 83 VPSYLIAGVSLLKELEHDNIVRLLDVLTTGRYVYLVFE 120
VP +L +G+ L LE VRL+DV VY +++
Sbjct: 139 VPIFLGSGIRLFDRLEEQVPVRLIDVYQKNELVYSIYQ 176
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 146 GSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
G+P Y AP + I S Y+ D WA+G + EM +G P F
Sbjct: 200 GTPEYLAP-AIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Score = 26.9 bits (58), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 13/83 (15%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHD- 100
+ ++ +G G FG V + E+G A+K+++ Q V LK++EH
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK------------VVKLKQIEHTL 89
Query: 101 NIVRLLDVLTTGRYVYLVFEYLD 123
N R+L + V L F + D
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKD 112
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 146 GSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
G+P Y APE +R Y D WA+G + EM++G+ F
Sbjct: 183 GTPNYIAPEI-LRGEDYGFSVDWWALGVLMFEMMAGRSPF 221
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 146 GSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
G+P Y APE +R Y D WA+G + EM++G+ F
Sbjct: 172 GTPNYIAPEI-LRGEDYGFSVDWWALGVLMFEMMAGRSPF 210
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 19/39 (48%)
Query: 146 GSPYKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
G+P I S Y+ D WA+G + EM +G P F
Sbjct: 200 GTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
Score = 26.9 bits (58), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 13/83 (15%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHD- 100
+ ++ +G G FG V + E+G A+K+++ Q V LK++EH
Sbjct: 42 QFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQK------------VVKLKQIEHTL 89
Query: 101 NIVRLLDVLTTGRYVYLVFEYLD 123
N R+L + V L F + D
Sbjct: 90 NEKRILQAVNFPFLVKLEFSFKD 112
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 49 IGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRLLDV 108
+G+G FG+VYK L G VA+K + + +G V ++ H N++RL
Sbjct: 38 LGRGGFGKVYKG-RLADGXLVAVKRLK-EERTQGGELQFQTEVEMISMAVHRNLLRLRGF 95
Query: 109 LTTGRYVYLVFEYL 122
T LV+ Y+
Sbjct: 96 CMTPTERLLVYPYM 109
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 42 NYKVVEKI-GQGVFGEVYKCLNLETGKKVAIKMI 74
+Y++ +++ G GV G+V +C + TG+K A+K++
Sbjct: 29 DYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLL 62
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 49 IGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRLLDV 108
+G+G FG+VYK L G VA+K + + +G V ++ H N++RL
Sbjct: 46 LGRGGFGKVYKG-RLADGTLVAVKRLK-EERXQGGELQFQTEVEMISMAVHRNLLRLRGF 103
Query: 109 LTTGRYVYLVFEYL 122
T LV+ Y+
Sbjct: 104 CMTPTERLLVYPYM 117
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 42 NYKVVEKI-GQGVFGEVYKCLNLETGKKVAIKMI 74
+Y++ +++ G GV G+V +C + TG+K A+K++
Sbjct: 10 DYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLL 43
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Query: 146 GSP-YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
G+P Y APE +R Y D WA+G + EM++G+ F
Sbjct: 215 GTPNYIAPEI-LRGEDYGFSVDWWALGVLMFEMMAGRSPF 253
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 44/106 (41%), Gaps = 14/106 (13%)
Query: 101 NIVRLLDVLTTGR---YVYLVFEYLDLDLGSFIRKHTITSIRPHIKE-------VGSP-Y 149
IV LD L + + Y L E L LD I+ + IK+ G+P Y
Sbjct: 259 EIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEY 318
Query: 150 KAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLI 195
APE + + Y D W +G + EM+ G+ P +DH L
Sbjct: 319 LAPEV-LEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHEKLF 361
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 44/106 (41%), Gaps = 14/106 (13%)
Query: 101 NIVRLLDVLTTGR---YVYLVFEYLDLDLGSFIRKHTITSIRPHIKE-------VGSP-Y 149
IV LD L + + Y L E L LD I+ + IK+ G+P Y
Sbjct: 256 EIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEY 315
Query: 150 KAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLI 195
APE + + Y D W +G + EM+ G+ P +DH L
Sbjct: 316 LAPEV-LEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHEKLF 358
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 28.9 bits (63), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 44/106 (41%), Gaps = 14/106 (13%)
Query: 101 NIVRLLDVLTTGR---YVYLVFEYLDLDLGSFIRKHTITSIRPHIKE-------VGSP-Y 149
IV LD L + + Y L E L LD I+ + IK+ G+P Y
Sbjct: 117 EIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEY 176
Query: 150 KAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLI 195
APE + + Y D W +G + EM+ G+ P +DH L
Sbjct: 177 LAPEV-LEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHEKLF 219
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 28.9 bits (63), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 44/106 (41%), Gaps = 14/106 (13%)
Query: 101 NIVRLLDVLTTGR---YVYLVFEYLDLDLGSFIRKHTITSIRPHIKE-------VGSP-Y 149
IV LD L + + Y L E L LD I+ + IK+ G+P Y
Sbjct: 116 EIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEY 175
Query: 150 KAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLI 195
APE + + Y D W +G + EM+ G+ P +DH L
Sbjct: 176 LAPEV-LEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHEKLF 218
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 28.5 bits (62), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
Y +PE + R DV+++GC+ E+++G+P F
Sbjct: 202 YLSPE-QARGDSVDARSDVYSLGCVLYEVLTGEPPF 236
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 28.5 bits (62), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 44/106 (41%), Gaps = 14/106 (13%)
Query: 101 NIVRLLDVLTTGR---YVYLVFEYLDLDLGSFIRKHTITSIRPHIKE-------VGSP-Y 149
IV LD L + + Y L E L LD I+ + IK+ G+P Y
Sbjct: 118 EIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEY 177
Query: 150 KAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLFPCGKKDHLSLI 195
APE + + Y D W +G + EM+ G+ P +DH L
Sbjct: 178 LAPEV-LEDNDYGRAVDWWGLGVVMYEMMCGR--LPFYNQDHEKLF 220
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 28.5 bits (62), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
Y +PE + R DV+++GC+ E+++G+P F
Sbjct: 185 YLSPE-QARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 11/87 (12%)
Query: 42 NYKVVEKI-GQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHD 100
+YKV ++ G G+ G+V + N T +K A+KM +Q+ P+ + + +
Sbjct: 24 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKM--LQDCPKARREVELH----WRASQCP 77
Query: 101 NIVRLLDV---LTTGRYVYL-VFEYLD 123
+IVR++DV L GR L V E LD
Sbjct: 78 HIVRIVDVYENLYAGRKCLLIVMECLD 104
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 11/87 (12%)
Query: 42 NYKVVEKI-GQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHD 100
+YKV ++ G G+ G+V + N T +K A+KM +Q+ P+ + + +
Sbjct: 17 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKM--LQDCPKARREVELH----WRASQCP 70
Query: 101 NIVRLLDV---LTTGRYVYL-VFEYLD 123
+IVR++DV L GR L V E LD
Sbjct: 71 HIVRIVDVYENLYAGRKCLLIVMECLD 97
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 11/87 (12%)
Query: 42 NYKVVEKI-GQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHD 100
+YKV ++ G G+ G+V + N T +K A+KM +Q+ P+ + + +
Sbjct: 32 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKM--LQDCPKARREVELH----WRASQCP 85
Query: 101 NIVRLLDV---LTTGRYVYL-VFEYLD 123
+IVR++DV L GR L V E LD
Sbjct: 86 HIVRIVDVYENLYAGRKCLLIVMECLD 112
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
Y +PE + R DV+++GC+ E+++G+P F
Sbjct: 185 YLSPE-QARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|2BPO|A Chain A, Crystal Structure Of The Yeast Cpr Triple Mutant: D74g,
Y75f, K78a.
pdb|2BPO|B Chain B, Crystal Structure Of The Yeast Cpr Triple Mutant: D74g,
Y75f, K78a
Length = 682
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 16/81 (19%)
Query: 35 MEKVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLL 94
+K+KD+ +V E I G F +Y C + + K GV + L+ +S
Sbjct: 612 QDKLKDYEDQVFEMINNGAF--IYVCGDAKGMAK-------------GVSTALVGILSRG 656
Query: 95 KELEHDNIVRLLDVL-TTGRY 114
K + D L+ +L T+GRY
Sbjct: 657 KSITTDEATELIKMLKTSGRY 677
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 11/87 (12%)
Query: 42 NYKVVEKI-GQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHD 100
+YKV ++ G G+ G+V + N T +K A+KM +Q+ P+ + + +
Sbjct: 16 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKM--LQDCPKARREVELH----WRASQCP 69
Query: 101 NIVRLLDV---LTTGRYVYL-VFEYLD 123
+IVR++DV L GR L V E LD
Sbjct: 70 HIVRIVDVYENLYAGRKCLLIVMECLD 96
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
Y +PE + R DV+++GC+ E+++G+P F
Sbjct: 185 YLSPE-QARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 28.5 bits (62), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/105 (20%), Positives = 48/105 (45%), Gaps = 26/105 (24%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
+++++ +G G FG V+ + G+ A+K++ + V LK++EH N
Sbjct: 7 DFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEI------------VVRLKQVEHTN 54
Query: 102 -------------IVRLLDVLTTGRYVYLVFEYLD-LDLGSFIRK 132
I+R+ + ++++ +Y++ +L S +RK
Sbjct: 55 DERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRK 99
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 28.5 bits (62), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 11/87 (12%)
Query: 42 NYKVVEKI-GQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHD 100
+YKV ++ G G+ G+V + N T +K A+KM +Q+ P+ + + +
Sbjct: 23 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKM--LQDCPKARREVELH----WRASQCP 76
Query: 101 NIVRLLDV---LTTGRYVYL-VFEYLD 123
+IVR++DV L GR L V E LD
Sbjct: 77 HIVRIVDVYENLYAGRKCLLIVMECLD 103
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 28.5 bits (62), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 43/81 (53%), Gaps = 9/81 (11%)
Query: 49 IGQGVFGEV--YKCLNLETGK-----KVAIKMINIQNEPEGVPSYLIAGVSLLKEL-EHD 100
+G+G FG+V + + ++ K VA+KM+ + E S L++ + ++K + +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK-DDATEKDLSDLVSEMEMMKMIGKHK 101
Query: 101 NIVRLLDVLTTGRYVYLVFEY 121
NI+ LL T +Y++ Y
Sbjct: 102 NIINLLGACTQDGPLYVIVAY 122
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 28.5 bits (62), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVSGKPLF 184
Y +PE + R DV+++GC+ E+++G+P F
Sbjct: 185 YLSPE-QARGDSVDARSDVYSLGCVLYEVLTGEPPF 219
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 28.5 bits (62), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 11/87 (12%)
Query: 42 NYKVVEKI-GQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHD 100
+YKV ++ G G+ G+V + N T +K A+KM +Q+ P+ + + +
Sbjct: 16 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKM--LQDCPKARREVELH----WRASQCP 69
Query: 101 NIVRLLDV---LTTGRYVYL-VFEYLD 123
+IVR++DV L GR L V E LD
Sbjct: 70 HIVRIVDVYENLYAGRKCLLIVMECLD 96
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 28.5 bits (62), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
Query: 149 YKAPESRIRSSVYSTPHDVWAVGCIFAEMVS--GKP 182
+ APES I +YST DVW+ G + E+ S G P
Sbjct: 267 WMAPES-IFDKIYSTKSDVWSYGVLLWEIFSLGGSP 301
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 28.5 bits (62), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 11/87 (12%)
Query: 42 NYKVVEKI-GQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHD 100
+YKV ++ G G+ G+V + N T +K A+KM +Q+ P+ + + +
Sbjct: 22 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKM--LQDCPKARREVELH----WRASQCP 75
Query: 101 NIVRLLDV---LTTGRYVYL-VFEYLD 123
+IVR++DV L GR L V E LD
Sbjct: 76 HIVRIVDVYENLYAGRKCLLIVMECLD 102
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 28.5 bits (62), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 11/87 (12%)
Query: 42 NYKVVEKI-GQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHD 100
+YKV ++ G G+ G+V + N T +K A+KM +Q+ P+ + + +
Sbjct: 18 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKM--LQDCPKARREVELH----WRASQCP 71
Query: 101 NIVRLLDV---LTTGRYVYL-VFEYLD 123
+IVR++DV L GR L V E LD
Sbjct: 72 HIVRIVDVYENLYAGRKCLLIVMECLD 98
>pdb|2BF4|A Chain A, A Second Fmn-Binding Site In Yeast Nadph-Cytochrome P450
Reductase Suggests A Novel Mechanism Of Electron
Transfer By Diflavin Reductases.
pdb|2BF4|B Chain B, A Second Fmn-Binding Site In Yeast Nadph-Cytochrome P450
Reductase Suggests A Novel Mechanism Of Electron
Transfer By Diflavin Reductases.
pdb|2BN4|A Chain A, A Second Fmn-Binding Site In Yeast Nadph-Cytochrome P450
Reductase Suggests A Novel Mechanism Of Electron
Transfer By Diflavin Reductase
pdb|2BN4|B Chain B, A Second Fmn-Binding Site In Yeast Nadph-Cytochrome P450
Reductase Suggests A Novel Mechanism Of Electron
Transfer By Diflavin Reductase
Length = 682
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 16/81 (19%)
Query: 35 MEKVKDWNYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLL 94
+K+KD+ +V E I G F +Y C + + K GV + L+ +S
Sbjct: 612 QDKLKDYEDQVFEMINNGAF--IYVCGDAKGMAK-------------GVSTALVGILSRG 656
Query: 95 KELEHDNIVRLLDVL-TTGRY 114
K + D L+ +L T+GRY
Sbjct: 657 KSITTDEATELIKMLKTSGRY 677
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNE-PEGVPSYLIAGVSLLKELEHD 100
++++++ IG+G F EV +TG+ A+K++N + G S +L +
Sbjct: 62 DFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRR 121
Query: 101 NIVRLLDVLTTGRYVYLVFEY 121
I +L Y+YLV EY
Sbjct: 122 WITQLHFAFQDENYLYLVMEY 142
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 11/87 (12%)
Query: 42 NYKVVEKI-GQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHD 100
+YKV ++ G G+ G+V + N T +K A+KM +Q+ P+ + + +
Sbjct: 62 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKM--LQDCPKARREVELH----WRASQCP 115
Query: 101 NIVRLLDV---LTTGRYVYL-VFEYLD 123
+IVR++DV L GR L V E LD
Sbjct: 116 HIVRIVDVYENLYAGRKCLLIVMECLD 142
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 28.5 bits (62), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 11/87 (12%)
Query: 42 NYKVVEKI-GQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHD 100
+YKV ++ G G+ G+V + N T +K A+KM +Q+ P+ + + +
Sbjct: 18 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKM--LQDCPKARREVELH----WRASQCP 71
Query: 101 NIVRLLDV---LTTGRYVYL-VFEYLD 123
+IVR++DV L GR L V E LD
Sbjct: 72 HIVRIVDVYENLYAGRKCLLIVMECLD 98
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 28.5 bits (62), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 11/87 (12%)
Query: 42 NYKVVEKI-GQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHD 100
+YKV ++ G G+ G+V + N T +K A+KM +Q+ P+ + + +
Sbjct: 68 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKM--LQDCPKARREVELH----WRASQCP 121
Query: 101 NIVRLLDV---LTTGRYVYL-VFEYLD 123
+IVR++DV L GR L V E LD
Sbjct: 122 HIVRIVDVYENLYAGRKCLLIVMECLD 148
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 28.5 bits (62), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 9/64 (14%)
Query: 38 VKDWNYKVVEKIGQGVFGEVYKCLNLETGKK----VAIKMINIQNEPEG-----VPSYLI 88
+K+ + V+ +G G FG VYK + + G+ VAIK++ P+ +Y++
Sbjct: 14 LKETELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVM 73
Query: 89 AGVS 92
AGV
Sbjct: 74 AGVG 77
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 28.5 bits (62), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 11/87 (12%)
Query: 42 NYKVVEKI-GQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHD 100
+YKV ++ G G+ G+V + N T +K A+KM +Q+ P+ + + +
Sbjct: 18 DYKVTSQVLGLGINGKVLQIFNKRTQEKFALKM--LQDCPKARREVELH----WRASQCP 71
Query: 101 NIVRLLDV---LTTGRYVYL-VFEYLD 123
+IVR++DV L GR L V E LD
Sbjct: 72 HIVRIVDVYENLYAGRKCLLIVMECLD 98
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 28.1 bits (61), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
+Y++ E IG G V +KVAIK IN++ + L+ + + + H N
Sbjct: 11 DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDE-LLKEIQAMSQCHHPN 69
Query: 102 IVRLLDVLTTGRYVYLVFEYL 122
IV ++LV + L
Sbjct: 70 IVSYYTSFVVKDELWLVMKLL 90
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 28.1 bits (61), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Query: 42 NYKVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELEHDN 101
+Y++ E IG G V +KVAIK IN++ + L+ + + + H N
Sbjct: 16 DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDE-LLKEIQAMSQCHHPN 74
Query: 102 IVRLLDVLTTGRYVYLVFEYL 122
IV ++LV + L
Sbjct: 75 IVSYYTSFVVKDELWLVMKLL 95
>pdb|2OND|A Chain A, Crystal Structure Of The Hat-C Domain Of Murine Cstf-77
pdb|2OND|B Chain B, Crystal Structure Of The Hat-C Domain Of Murine Cstf-77
Length = 308
Score = 28.1 bits (61), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Query: 67 KKVAIKMINIQNEPEG-VPSYLIAGVSLLKELEHDNIVRLL--DVLTTG 112
K VA K+ + + G +P Y++A + L L DN R+L VLT+G
Sbjct: 185 KSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSG 233
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 28.1 bits (61), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 8/98 (8%)
Query: 42 NYKVVEKI-GQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELE-H 99
N V EKI G G G V + + G+ VA+K + I + + LL E + H
Sbjct: 15 NLVVSEKILGYGSSGTVVFQGSFQ-GRPVAVKRMLID-----FCDIALMEIKLLTESDDH 68
Query: 100 DNIVRLLDVLTTGRYVYLVFEYLDLDLGSFIRKHTITS 137
N++R TT R++Y+ E +L+L + ++
Sbjct: 69 PNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSD 106
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 28.1 bits (61), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 43/81 (53%), Gaps = 9/81 (11%)
Query: 49 IGQGVFGEV--YKCLNLETGK-----KVAIKMINIQNEPEGVPSYLIAGVSLLKEL-EHD 100
+G+G FG+V + + ++ K VA+KM+ + E S L++ + ++K + +H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLK-DDATEKDLSDLVSEMEMMKMIGKHK 101
Query: 101 NIVRLLDVLTTGRYVYLVFEY 121
NI+ LL T +Y++ Y
Sbjct: 102 NIINLLGACTQDGPLYVIVGY 122
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex
With 2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 27.7 bits (60), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%)
Query: 44 KVVEKIGQGVFGEVYKCLNLETGKKVAIKMINIQN 78
+V +KIG G FGE+ NL T + VAIK+ I++
Sbjct: 3 RVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKS 37
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 27.7 bits (60), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 8/98 (8%)
Query: 42 NYKVVEKI-GQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELE-H 99
N V EKI G G G V + + G+ VA+K + I + + LL E + H
Sbjct: 15 NLVVSEKILGYGSSGTVVFQGSFQ-GRPVAVKRMLID-----FCDIALMEIKLLTESDDH 68
Query: 100 DNIVRLLDVLTTGRYVYLVFEYLDLDLGSFIRKHTITS 137
N++R TT R++Y+ E +L+L + ++
Sbjct: 69 PNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSD 106
>pdb|2OOE|A Chain A, Crystal Structure Of Hat Domain Of Murine Cstf-77
Length = 530
Score = 27.7 bits (60), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 15/88 (17%)
Query: 67 KKVAIKMINIQNEPEG-VPSYLIAGVSLLKELEHDNIVRLL--DVLTTGRY--------- 114
K VA K+ + + G +P Y++A + L L DN R+L VLT+G
Sbjct: 407 KSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEKSGEIW 466
Query: 115 -VYLVFEYLDLDLGSFIR--KHTITSIR 139
+L FE DL S ++ K T+ R
Sbjct: 467 ARFLAFESNIGDLASILKVEKRRFTAFR 494
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 27.7 bits (60), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 8/98 (8%)
Query: 42 NYKVVEKI-GQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELE-H 99
N V EKI G G G V + + G+ VA+K + I + + LL E + H
Sbjct: 33 NLVVSEKILGYGSSGTVVFQGSFQ-GRPVAVKRMLID-----FCDIALMEIKLLTESDDH 86
Query: 100 DNIVRLLDVLTTGRYVYLVFEYLDLDLGSFIRKHTITS 137
N++R TT R++Y+ E +L+L + ++
Sbjct: 87 PNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSD 124
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 27.7 bits (60), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 8/98 (8%)
Query: 42 NYKVVEKI-GQGVFGEVYKCLNLETGKKVAIKMINIQNEPEGVPSYLIAGVSLLKELE-H 99
N V EKI G G G V + + G+ VA+K + I + + LL E + H
Sbjct: 33 NLVVSEKILGYGSSGTVVFQGSFQ-GRPVAVKRMLID-----FCDIALMEIKLLTESDDH 86
Query: 100 DNIVRLLDVLTTGRYVYLVFEYLDLDLGSFIRKHTITS 137
N++R TT R++Y+ E +L+L + ++
Sbjct: 87 PNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSD 124
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 27.7 bits (60), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 49 IGQGVFGEVYKCL-NLETGKK--VAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRL 105
+G+G FGEVY+ + G+K VA+K + ++ V ++K L+H +IV+L
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAV-IMKNLDHPHIVKL 90
Query: 106 LDVL 109
+ ++
Sbjct: 91 IGII 94
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 27.7 bits (60), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 49 IGQGVFGEVYKCL-NLETGKK--VAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRL 105
+G+G FGEVY+ + G+K VA+K + ++ V ++K L+H +IV+L
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAV-IMKNLDHPHIVKL 74
Query: 106 LDVL 109
+ ++
Sbjct: 75 IGII 78
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 27.7 bits (60), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 49 IGQGVFGEVYKCL-NLETGKK--VAIKMINIQNEPEGVPSYLIAGVSLLKELEHDNIVRL 105
+G+G FGEVY+ + G+K VA+K + ++ V ++K L+H +IV+L
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAV-IMKNLDHPHIVKL 78
Query: 106 LDVL 109
+ ++
Sbjct: 79 IGII 82
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 27.3 bits (59), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 8/95 (8%)
Query: 90 GVSLLKELEHDNI---VRLLDVLTTGRYVYLVFEYLDLDLGSFIRKHTITSIRPHIKEVG 146
VS++K LEH + V DV + + + + D G I + + S+ I
Sbjct: 159 AVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFG--ISGYLVDSVAKTIDAGC 216
Query: 147 SPYKAPE---SRIRSSVYSTPHDVWAVGCIFAEMV 178
PY APE + YS D+W++G E+
Sbjct: 217 KPYMAPERINPELNQKGYSVKSDIWSLGITMIELA 251
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 27.3 bits (59), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 22/105 (20%), Positives = 49/105 (46%), Gaps = 10/105 (9%)
Query: 37 KVKDWNYKVVEKIGQGVFGEVYKCLNLETGK-------KVAIKMINIQNEPEGVPSYLIA 89
K+++ + E +GQG F +++K + E G +V +K+++ +
Sbjct: 4 KIRNEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH--RNYSESFFE 61
Query: 90 GVSLLKELEHDNIVRLLDVLTTGRYVYLVFEYLDL-DLGSFIRKH 133
S++ +L H ++V V G LV E++ L ++++K+
Sbjct: 62 AASMMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKN 106
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 26.9 bits (58), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 5/31 (16%)
Query: 39 KDW--NYKVVEKIGQGVFGEVYKCLNLETGK 67
+DW +++V +G+G FGEV+ C TGK
Sbjct: 184 EDWFLDFRV---LGRGGFGEVFACQMKATGK 211
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 26.9 bits (58), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 5/31 (16%)
Query: 39 KDW--NYKVVEKIGQGVFGEVYKCLNLETGK 67
+DW +++V +G+G FGEV+ C TGK
Sbjct: 184 EDWFLDFRV---LGRGGFGEVFACQMKATGK 211
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 26.9 bits (58), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 5/31 (16%)
Query: 39 KDW--NYKVVEKIGQGVFGEVYKCLNLETGK 67
+DW +++V +G+G FGEV+ C TGK
Sbjct: 184 EDWFLDFRV---LGRGGFGEVFACQMKATGK 211
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 26.9 bits (58), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 5/31 (16%)
Query: 39 KDW--NYKVVEKIGQGVFGEVYKCLNLETGK 67
+DW +++V +G+G FGEV+ C TGK
Sbjct: 184 EDWFLDFRV---LGRGGFGEVFACQMKATGK 211
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.140 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,999,392
Number of Sequences: 62578
Number of extensions: 244208
Number of successful extensions: 2501
Number of sequences better than 100.0: 995
Number of HSP's better than 100.0 without gapping: 725
Number of HSP's successfully gapped in prelim test: 270
Number of HSP's that attempted gapping in prelim test: 826
Number of HSP's gapped (non-prelim): 1580
length of query: 218
length of database: 14,973,337
effective HSP length: 95
effective length of query: 123
effective length of database: 9,028,427
effective search space: 1110496521
effective search space used: 1110496521
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 49 (23.5 bits)